format-version: 1.2 date: 5:0:2011 15:43 saved-by: jonathanbard auto-generated-by: COBrA 1.2 typeref: anatomical_entity_ontology default-namespace: anatomical_entity_ontology remark: this version corrects the namespace and includes some flybase alt_IDs [Term] id: AEO:0000094 name: sense organ namespace: anatomical_entity_ontology def: "Multicellular anatomical structure with largely bona fide boundary that transduces some sensory stimulus to the nervous system." [AEO:JB] alt_id: EHDAA2:0003094 alt_id: FBbt:00005155 is_a: AEO:0000024 [Term] id: AEO:0000100 name: chitin-based structure namespace: anatomical_entity_ontology def: "Acellular anatomical structure whose predominant constituent is chitin." [AEO:JB] alt_id: EHDAA2:0003100 is_a: AEO:0000040 [Term] id: AEO:0000095 name: fluid-based anatomical entity namespace: anatomical_entity_ontology def: "Fluid anatomical entity containing cells." [AEO:JB] alt_id: EHDAA2:0003095 is_a: AEO:0000055 [Term] id: AEO:0000096 name: gland namespace: anatomical_entity_ontology def: "A multi-tissue structure that produces a secretion for use elsewhere in the body." [AEO:JB] alt_id: EHDAA2:0003096 is_a: AEO:0000055 [Term] id: AEO:0000097 name: ducted gland namespace: anatomical_entity_ontology def: "A gland that releases its secretion through a duct." [AEO:JB] alt_id: EHDAA2:0003097 synonym: "exocrine gland." [] is_a: AEO:0000096 [Term] id: AEO:0000090 name: ligament namespace: anatomical_entity_ontology def: "A strap of predominantly extracellular matrix connecting two bones." [AEO:JB] alt_id: EHDAA2:0003090 is_a: AEO:0000081 relationship: part_of AEO:0000168 [Term] id: AEO:0000091 name: tendon namespace: anatomical_entity_ontology def: "A strap of predominantly extracellular matrix connecting a muscle to a bone." [AEO:JB] alt_id: EHDAA2:0003091 is_a: AEO:0000081 relationship: part_of AEO:0000168 [Term] id: AEO:0000009 name: anatomical point namespace: anatomical_entity_ontology def: "Non-material anatomical entity of zero dimension\, which forms a boundary of an anatomical line or surface." [CARO:MAH] alt_id: EHDAA2:0003009 alt_id: CARO:0000009007 is_a: AEO:0000007 [Term] id: AEO:0000092 name: aponeurosis namespace: anatomical_entity_ontology def: "A sheet of extracellular matrix." [AEO:JB] alt_id: EHDAA2:0003092 is_a: AEO:0000081 [Term] id: AEO:0000008 name: anatomical line namespace: anatomical_entity_ontology def: "Non-material anatomical entity of one dimension\, which forms a boundary of an anatomical surface or is a modulation of an anatomical surface." [CARO:MAH] alt_id: EHDAA2:0003008 alt_id: CARO:0000008 is_a: AEO:0000007 [Term] id: AEO:0000103 name: body namespace: anatomical_entity_ontology def: "The region of the organism associated with the visceral organs." [AEO:JB] alt_id: EHDAA2:0003103 is_a: AEO:0000032 [Term] id: AEO:0000093 name: non-connected functional system namespace: anatomical_entity_ontology def: "An anatomical group whose component structures share a common function." [AEO:JB] alt_id: EHDAA2:0003093 alt_id: FBbt:00007278 is_a: AEO:0000041 [Term] id: AEO:0000007 name: immaterial anatomical entity namespace: anatomical_entity_ontology def: "Anatomical entity that has no mass." [CARO:MAH] alt_id: EHDAA2:0003007 alt_id: CARO:0000007 alt_id: UBERON:0000466 is_a: AEO:0000000 [Term] id: AEO:0000006 name: material anatomical entity namespace: anatomical_entity_ontology def: "Anatomical entity that has mass." [CARO:MAH] alt_id: EHDAA2:0003006 alt_id: CARO:0000006 alt_id: UBERON:0000465 is_a: AEO:0000000 [Term] id: AEO:0000109 name: tail namespace: anatomical_entity_ontology def: "An external caudal extension of the body." [AEO:JB] alt_id: EHDAA2:0003109 is_a: AEO:0000193 [Term] id: AEO:0000005 name: anatomical space namespace: anatomical_entity_ontology def: "Non-material anatomical entity of three dimensions\, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures." [CARO:MAH] alt_id: EHDAA2:0003005 alt_id: CARO:0000005 alt_id: UBERON:0000464 is_a: AEO:0000007 [Term] id: AEO:0000190 name: simple organ namespace: anatomical_entity_ontology def: "Multi-tissue structure that is not part of a compound organ." [CARO:MAH] alt_id: EHDAA2:0003190 alt_id: CARO:0000021 is_a: AEO:0000055 [Term] id: AEO:0000108 name: neck namespace: anatomical_entity_ontology def: "The region of the body connecting the head and the body." [AEO:JB] alt_id: EHDAA2:0003108 is_a: AEO:0000032 [Term] id: AEO:0000004 name: portion of organism substance namespace: anatomical_entity_ontology def: "Material anatomical entity in a gaseous\, liquid\, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body." [CARO:MAH] alt_id: EHDAA2:0003004 alt_id: CARO:0000004 alt_id: UBERON:0000463 is_a: AEO:0000006 [Term] id: AEO:0000191 name: multi-cellular organism namespace: anatomical_entity_ontology def: "Anatomical structure that is an individual member of a species and consists of more than one cell." [JB:DEF] alt_id: EHDAA2:0003191 alt_id: CARO:0000012 alt_id: UBERON:0000468 is_a: AEO:0000003 [Term] id: AEO:0000192 name: anatomical surface namespace: anatomical_entity_ontology def: "Non-material anatomical entity of two dimensions\, that is demarcated by anatomical lines or points on the external or internal surfaces of anatomical structures." [CARO:MAH] alt_id: EHDAA2:0003192 alt_id: UBERON:0000015 alt_id: CARO:0000010 is_a: AEO:0000007 [Term] id: AEO:0000003 name: anatomical structure namespace: anatomical_entity_ontology def: "Material anatomical entity that has inherent 3D shape and is generated by coordinated expression of the organism's own genome." [CARO:MAH] alt_id: EHDAA2:0003003 alt_id: CARO:0000003 alt_id: UBERON:0000061 is_a: AEO:0000006 [Term] id: AEO:0000106 name: head namespace: anatomical_entity_ontology def: "The region of the body containing the brain and mouth." [AEO:JB] alt_id: EHDAA2:0003106 is_a: AEO:0000032 [Term] id: AEO:0000193 name: appendage namespace: anatomical_entity_ontology def: "Organ or organ part that is attached to the body of an organism. For example a limb\[GO\, modified\]. An appendage is an external body part\, or natural prolongation\, that protrudes from an organism's body\, such as a vertebrate's limbs." [CARO:MAH] alt_id: EHDAA2:0003193 alt_id: UBERON:0000026 is_a: AEO:0000032 [Term] id: AEO:0000194 name: conceptus namespace: anatomical_entity_ontology def: "All the products of the fertilized egg." [AEO:JB] alt_id: EHDAA2:0003205 is_a: AEO:0000191 [Term] id: AEO:0000000 name: anatomical entity namespace: anatomical_entity_ontology def: "Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species." [CARO:MAH] alt_id: EHDAA2:0003000 alt_id: CARO:0000000 alt_id: UBERON:0001062 [Term] id: AEO:0000195 name: extraembryonic component namespace: anatomical_entity_ontology def: "The part of the conceptus that may be lost before birth or will be discarded at birth\, or when the embryo becomes an independent organism." [AEO:JB] relationship: part_of AEO:0000194 is_a: AEO:0000197 [Term] id: AEO:0000196 name: larval anatomical structure namespace: anatomical_entity_ontology def: "An anatomical structure present in the larval form of an animal." [AEO:JB] alt_id: HDAA2:0003126 is_a: AEO:0000125 relationship: part_of AEO:0000126 [Term] id: AEO:0000187 name: multi-tissue structure with stem cells namespace: anatomical_entity_ontology def: "Multi-tissue structure one of whose parts contains stem cells that can replace other parts." [AEO:JB] alt_id: EHDAA2:0003187 is_a: AEO:0000055 [Term] id: AEO:0000186 name: body cavity namespace: anatomical_entity_ontology def: "The cavity within the body that contains the visceral organs." [AEO:JB] alt_id: EHDAA2:0003186 is_a: AEO:0000005 [Term] id: AEO:0000189 name: epithelial tissue with stem cells namespace: anatomical_entity_ontology def: "Multi-tissue epithelial structure one of whose parts contains stem cells that can replace other parts." [AEO:JB] alt_id: EHDAA2:0003189 is_a: AEO:0000187 [Term] id: AEO:0000188 name: acellular fluid anatomical entity namespace: anatomical_entity_ontology def: "An acellular fluid portion of organism substance that is produced by the organism for some non-waste purpose." [AEO:JB] alt_id: EHDAA2:0003188 is_a: AEO:0000040 is_a: AEO:0000004 [Term] id: AEO:0000087 name: cartilage namespace: anatomical_entity_ontology def: "Dense connective tissue made primarily of type II collagen." [AEO:JB] alt_id: EHDAA2:0003087 is_a: AEO:0000081 relationship: part_of AEO:0000168 [Term] id: AEO:0000085 name: membrane bone namespace: anatomical_entity_ontology def: "Bone that forms directly from mesenchyme." [AEO:JB] alt_id: EHDAA2:0003085 is_a: AEO:0000082 relationship: part_of AEO:0000168 [Term] id: AEO:0000086 name: sesamoid bone namespace: anatomical_entity_ontology def: "An endochondral bone that forms within tendenous or ligamentous matrix." [AEO:JB] alt_id: EHDAA2:0003086 is_a: AEO:0000083 relationship: part_of AEO:0000168 [Term] id: AEO:0000083 name: endochondral bone namespace: anatomical_entity_ontology def: "Bone that is preformed in cartilage." [AEO:JB] alt_id: EHDAA2:0003083 is_a: AEO:0000082 relationship: part_of AEO:0000168 [Term] id: AEO:0000081 name: matrix-based tissue namespace: anatomical_entity_ontology def: "A tissue whose predominant feature is extracellular matrix which may or may not be highly hydrated or calcified." [AEO:JB] alt_id: EHDAA2:0003081 is_a: AEO:0000043 [Term] id: AEO:0000082 name: bone namespace: anatomical_entity_ontology def: "Ossified structure that is predominantly extracellular matrix and forms part of the support system of the body." [AEO:JB] alt_id: EHDAA2:0003082 is_a: AEO:0000055 [Term] id: AEO:0000211 name: non-connected developing functional system namespace: http\://www.xspan.org/obo.owl# def: "The sum of all the anlagen and primordia that will develop into a single functional system." [FBbt:DOS] alt_id: FBbt:0004003 alt_id: HDAA2:0003256 is_a: AEO:0000041 is_a: AEO:0000125 [Term] id: AEO:0000210 name: row namespace: http\://www.xspan.org/obo.owl# def: "Anatomical group whose component structures are arranged in a row." [DBft:DOS] alt_id: FBbt:00100152 alt_id: HDAA2:0003255 is_a: AEO:0000054 [Term] id: AEO:0000080 name: foramen namespace: anatomical_entity_ontology def: "A hole in a tissue." [AEO:JB] alt_id: EHDAA2:0003080 is_a: AEO:0000010 [Term] id: AEO:0000180 name: non-joint-associated cartilage namespace: anatomical_entity_ontology def: "Cartilage that may provide the template for an endochondral bone or that may be a disinct entity in the skeleton." [AEO:JB] alt_id: EHDAA2:0003180 is_a: AEO:0000087 relationship: part_of AEO:0000168 [Term] id: AEO:0000181 name: synovial membrane namespace: anatomical_entity_ontology def: "The epithelial membrane between bone ends that forms the lateral borders of the synovial cavity and secretes synovial fluid." [AEO:JB] alt_id: EHDAA2:0003181 is_a: AEO:0000069 relationship: part_of AEO:0000183 [Term] id: AEO:0000184 name: waste substance namespace: anatomical_entity_ontology def: "Portion of organism substance that can be lost from the organism and has no functional role for that organism." [CARO:MAH] alt_id: EHDAA2:0003184 is_a: AEO:0000004 [Term] id: AEO:0000185 name: exoskeletal tissue namespace: anatomical_entity_ontology def: "A component of the exoskeleton." [AEO:JB] alt_id: EHDAA2:0003185 is_a: AEO:0000081 relationship: part_of AEO:0000168 [Term] id: AEO:0000183 name: synovial joint namespace: anatomical_entity_ontology def: "A joint connecting two or more bones with cartilage at the bone ends and a synovial membrane that secretes synovial fluid conecting the bones and sealing the synovial cavity." [AEO:JB] alt_id: EHDAA2:0003183 is_a: AEO:0000055 relationship: part_of AEO:0000168 [Term] id: AEO:0000178 name: fibrous joint namespace: anatomical_entity_ontology def: "A flexible joint between two bones that is made of unossified connective tissue." [AEO:JB] alt_id: EHDAA2:0003178 is_a: AEO:0000081 relationship: part_of AEO:0000168 [Term] id: AEO:0000177 name: hermaphrodite anatomical structure namespace: anatomical_entity_ontology def: "A part of the body present only in hermaphrodites." [AEO:JB] alt_id: EHDAA2:0003177 is_a: AEO:0000174 [Term] id: AEO:0000176 name: female anatomical structure namespace: anatomical_entity_ontology def: "A part of the body present only in females." [AEO:JB] alt_id: EHDAA2:0003176 is_a: AEO:0000174 [Term] id: AEO:0000175 name: male anatomical structure namespace: anatomical_entity_ontology def: "A part of the body present only in males." [AEO:JB] alt_id: EHDAA2:0003175 is_a: AEO:0000174 [Term] id: AEO:0000179 name: joint-associated cartilage namespace: anatomical_entity_ontology def: "The articular cartilage covering of the region of bone within a synoval joint." [AEO:JB] alt_id: EHDAA2:0003179 is_a: AEO:0000087 relationship: part_of AEO:0000083 relationship: part_of AEO:0000183 [Term] id: AEO:0000079 name: cavity of vesicle namespace: anatomical_entity_ontology def: "The space within an epithelial sphere." [AEO:JB] alt_id: EHDAA2:0003079 is_a: AEO:0000005 [Term] id: AEO:0000078 name: lumen of tube namespace: anatomical_entity_ontology def: "The inner space within a tube." [AEO:JB] alt_id: EHDAA2:0003078 is_a: AEO:0000005 [Term] id: AEO:0000127 name: apoptosing developing anatomical entity namespace: anatomical_entity_ontology def: "An embryonic anatomical structure undergoing apoptosis." [AEO:JB] alt_id: EHDAA2:0003127 is_a: AEO:0000125 [Term] id: AEO:0000126 name: larva namespace: anatomical_entity_ontology def: "A post-embryonic juvenile form which will undergo metamorphosis to become the adult." [AEO:JB] alt_id: EHDAA2:0003126 is_a: AEO:0000191 [Term] id: AEO:0000070 name: simple squamous epithelium namespace: anatomical_entity_ontology def: "Unilaminar epithelium that consists of a single layer of squamous cells." [CARO:MAH] alt_id: EHDAA2:0003070 alt_id: CARO:0000070 is_a: AEO:0000073 [Term] id: AEO:0000125 name: developing anatomical structure namespace: anatomical_entity_ontology def: "A structure whose morphology or state of differentiation will change during normal development." [AEO:JB] alt_id: EHDAA2:0003125 is_a: AEO:0000003 [Term] id: AEO:0000071 name: atypical epithelium namespace: anatomical_entity_ontology def: "Epithelium that consists of epithelial cells not arranged in one ore more layers." [CARO:MAH] alt_id: EHDAA2:0003071 alt_id: CARO:0000071 is_a: AEO:0000066 [Term] id: AEO:0000123 name: neural tissue namespace: anatomical_entity_ontology def: "Tissue composed predominantly of neurons." [AEO:JB] alt_id: EHDAA2:0003123 is_a: AEO:0000043 [Term] id: AEO:0000072 name: cavitated compound organ namespace: anatomical_entity_ontology def: "Compound organ that contains one or more macroscopic anatomical spaces." [CARO:MAH] alt_id: EHDAA2:0003072 alt_id: CARO:0000072 is_a: AEO:0000024 [Term] id: AEO:0000122 name: muscle tissue namespace: anatomical_entity_ontology def: "A tissue composed of myoblasts or muscle cells." [AEO:JB] alt_id: EHDAA2:0003122 is_a: AEO:0000043 [Term] id: AEO:0000073 name: unilaminar epithelium namespace: anatomical_entity_ontology def: "Epithelium that consists of a single layer of epithelial cells." [CARO:MAH] alt_id: EHDAA2:0003073 alt_id: CARO:0000073 is_a: AEO:0000066 [Term] id: AEO:0000074 name: solid compound organ namespace: anatomical_entity_ontology def: "Compound organ that does not contain macroscopic anatomical spaces." [CARO:MAH] alt_id: EHDAA2:0003074 alt_id: CARO:0000074 is_a: AEO:0000024 [Term] id: AEO:0000129 name: functioning and developing structure namespace: anatomical_entity_ontology def: "An embryonic entity that displays a physiological function but whose strucuture is not yet fully formed." [AEO:JB] alt_id: EHDAA2:0003129 is_a: AEO:0000125 [Term] id: AEO:0000066 name: epithelium namespace: anatomical_entity_ontology def: "Portion of tissue\, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina." [CARO:MAH] alt_id: EHDAA2:0003066 alt_id: CARO:0000066 is_a: AEO:0000043 [Term] id: AEO:0000130 name: developed embryonic entity namespace: anatomical_entity_ontology def: "An embryonic entity that has completed its structural development." [AEO:JB] alt_id: EHDAA2:0003130 is_a: AEO:0000197 [Term] id: AEO:0000065 name: basal lamina namespace: anatomical_entity_ontology def: "Acellular anatomical structure that consists of a thin sheet of fibrous proteins that underlie and support the cells of an epithelium. It separates the cells of an epithelium from any underlying tissue." [CARO:MAH] alt_id: EHDAA2:0003065 alt_id: CARO:0000065 is_a: AEO:0000040 relationship: part_of AEO:0000066 [Term] id: AEO:0000068 name: columnar epithlium namespace: anatomical_entity_ontology def: "Unilaminar epithelium that consists of a single layer of columnar cells." [CARO:MAH] alt_id: EHDAA2:0003068 alt_id: CARO:0000068 is_a: AEO:0000073 [Term] id: AEO:0000067 name: simple cuboidal epithelium namespace: anatomical_entity_ontology def: "Unilaminar epithelium that consists of a single layer of cuboidal cells." [CARO:MAH] alt_id: EHDAA2:0003067 alt_id: CARO:0000067 is_a: AEO:0000073 [Term] id: AEO:0000069 name: multilaminar epithelium namespace: anatomical_entity_ontology def: "Epithelium that consists of more than one layer of epithelial cells." [CARO:MAH] alt_id: EHDAA2:0003069 alt_id: CARO:0000069 is_a: AEO:0000066 [Term] id: AEO:0000114 name: epithelial tube namespace: anatomical_entity_ontology def: "An epithelial structure capable of allowing fluid containment or flow." [AEO:JB] alt_id: EHDAA2:0003114 is_a: AEO:0000066 [Term] id: AEO:0000116 name: epithelial tube open at both ends namespace: anatomical_entity_ontology def: "An epithelial tube open at both ends that allows fluid flow." [AEO:JB] alt_id: EHDAA2:0003116 is_a: AEO:0000114 [Term] id: AEO:0000115 name: epithelial sac namespace: anatomical_entity_ontology def: "An epithelial tube that is open at one end only." [AEO:JB] alt_id: EHDAA2:0003115 is_a: AEO:0000114 [Term] id: AEO:0000112 name: epithelial placode namespace: anatomical_entity_ontology def: "A colunar domain of epithelium that will develop into another tissue." [AEO:JB] alt_id: EHDAA2:0003112 is_a: AEO:0000068 [Term] id: AEO:0000111 name: mesothelium namespace: anatomical_entity_ontology def: "Epithelium derived from mesenchyme." [AEO:JB] alt_id: EHDAA2:0003111 is_a: AEO:0000070 [Term] id: AEO:0000118 name: epithelial plexus namespace: anatomical_entity_ontology def: "A complex of interlinking epithelial tubules." [AEO:JB] alt_id: EHDAA2:0003118 is_a: AEO:0000114 [Term] id: AEO:0000117 name: arborising epithelial duct system namespace: anatomical_entity_ontology def: "A collection of connected epithelial tubes with a single portal." [AEO:JB] alt_id: EHDAA2:0003117 is_a: AEO:0000114 [Term] id: AEO:0000119 name: epithelial vesicle namespace: anatomical_entity_ontology def: "A closed epithelium with a lumen." [AEO:JB] alt_id: EHDAA2:0003119 is_a: AEO:0000066 [Term] id: AEO:0000199 name: mucous membrane namespace: anatomical_entity_ontology def: "A membranous structure with more than one cell type\, one or more of which secretes mucus\, that lines body passages which communicate with the exterior." [AEO:JB] alt_id: EHDAA2:0003234 synonym: "mucosa" [] is_a: AEO:0000055 [Term] id: AEO:0000198 name: antenna namespace: anatomical_entity_ontology def: "A head-associated surface sense organ." [CARO:MAH] relationship: part_of AEO:0000106 relationship: part_of AEO:0000154 is_a: AEO:0000173 [Term] id: AEO:0000197 name: obsolete namespace: anatomical_entity_ontology is_a: AEO:0000000 [Term] id: AEO:0000055 name: multi-tissue structure namespace: anatomical_entity_ontology def: "Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types." [CARO:MAH] alt_id: EHDAA2:0003055 alt_id: CARO:0000055 alt_id: UBERON:0000481 is_a: AEO:0000003 [Term] id: AEO:0000054 name: anatomical group namespace: anatomical_entity_ontology def: "Anatomical structure consisting of at least two non-overlapping organs\, multi-tissue aggregates or portion of tissues or cells of different types that does not constitute an organism\, organ\, multi-tissue aggregate\, or portion of tissue." [CARO:MAH] alt_id: EHDAA2:0003054 alt_id: CARO:0000054 alt_id: UBERON:0000480 is_a: AEO:0000003 [Term] id: AEO:0000043 name: simple tissue namespace: anatomical_entity_ontology def: "Anatomical structure\, that consists of similar cells and intercellular matrix\, aggregated according to genetically determined spatial relationships." [CARO:MAH] alt_id: EHDAA2:0003043 alt_id: CARO:0000043 alt_id: UBERON:0000479 synonym: "portion of tissue." [] is_a: AEO:0000003 [Term] id: AEO:0000144 name: striated muscle sphincter namespace: anatomical_entity_ontology def: "A ring of striated muscle cells whose contraction closes the opening of the ring." [AEO:JB] alt_id: EHDAA2:0003144 is_a: AEO:0000140 [Term] id: AEO:0000145 name: mesenchymal tissue namespace: anatomical_entity_ontology def: "A group of not-yet-terminally-differentiatied cells that can pack in three dimensions." [AEO:JB] alt_id: EHDAA2:0003145 is_a: AEO:0000043 [Term] id: AEO:0000142 name: cardiac muscle tissue namespace: anatomical_entity_ontology def: "A tissue composed of cardiac muscle cells." [AEO:JB] alt_id: EHDAA2:0003142 is_a: AEO:0000122 [Term] id: AEO:0000143 name: smooth muscle sphincter namespace: anatomical_entity_ontology def: "A ring of smooth muscle cells whose contraction closes the opening of the ring." [AEO:JB] alt_id: EHDAA2:0003143 is_a: AEO:0000141 [Term] id: AEO:0000148 name: developing mesenchymal condensation namespace: anatomical_entity_ontology def: "A delimited region of dense mesenchyme within looser mesenchyme." [AEO:JB] alt_id: EHDAA2:0003148 is_a: AEO:0000146 is_a: AEO:0000125 [Term] id: AEO:0000149 name: pre-muscle condensation namespace: anatomical_entity_ontology def: "A delimited region of dense mesenchyme within looser mesenchyme whose cells are committed to become myoblasts." [AEO:JB] alt_id: EHDAA2:0003149 is_a: AEO:0000148 [Term] id: AEO:0000146 name: dense mesenchyme tissue namespace: anatomical_entity_ontology def: "Mesenchyme with little extracellular matrix." [AEO:JB] alt_id: EHDAA2:0003146 is_a: AEO:0000145 [Term] id: AEO:0000147 name: cartilagenous condensation namespace: anatomical_entity_ontology def: "A delimited region of dense chondroblasts within looser mesenchyme." [AEO:JB] alt_id: EHDAA2:0003147 is_a: AEO:0000148 [Term] id: AEO:0000152 name: migrating mesenchyme population namespace: anatomical_entity_ontology def: "Mesenchymal cells that are migrating." [AEO:JB] alt_id: EHDAA2:0003152 is_a: AEO:0000145 [Term] id: AEO:0000151 name: loose mesenchyme tissue namespace: anatomical_entity_ontology def: "Mesenchyme whose cells are embedded in obvious amounts fo extracellular matrix." [AEO:JB] alt_id: EHDAA2:0003151 is_a: AEO:0000145 [Term] id: AEO:0000150 name: pre-cartilage condensation namespace: anatomical_entity_ontology def: "A delimited region of dense mesenchyme within looser mesenchyme whose cells are committed to become chondroblasts." [AEO:JB] alt_id: EHDAA2:0003150 is_a: AEO:0000148 [Term] id: AEO:0000139 name: fibre tract namespace: anatomical_entity_ontology def: "A group of demarcated axons that connects two neuronal domains." [AEO:JB] alt_id: EHDAA2:0003139 is_a: AEO:0000123 [Term] id: AEO:0000032 name: organism subdivision namespace: anatomical_entity_ontology def: "Anatomical structure which is a primary subdivision of whole organism. The mereological sum of these is the whole organism." [CARO:MAH] alt_id: EHDAA2:0003032 alt_id: CARO:0000032 alt_id: UBERON:0000475 is_a: AEO:0000003 [Term] id: AEO:0000131 name: developing structure with stem cells namespace: anatomical_entity_ontology def: "Embronic structure that contains stem cellsr that may contribute to its future development or maintenance or to its future development or maintenance of another tissue." [AEO:JB] alt_id: EHDAA2:0003131 is_a: AEO:0000125 [Term] id: AEO:0000132 name: transitional anatomical structure namespace: anatomical_entity_ontology def: "An embryonic anatomical entity that will turn into one or more other anatomical entities\, perhaps with other anatomical entities\, later in development." [AEO:JB] alt_id: EHDAA2:0003132 is_a: AEO:0000125 [Term] id: AEO:0000135 name: ganglion namespace: anatomical_entity_ontology def: "A group of neurons\, usually outside the CNS\, which relay neuronal signals." [AEO:JB] alt_id: EHDAA2:0003135 is_a: AEO:0000123 [Term] id: AEO:0000136 name: neuronal nucleus namespace: anatomical_entity_ontology def: "A demarcated domain of predominantly neuronal tissue in the central nervous system." [AEO:JB] alt_id: EHDAA2:0003136 is_a: AEO:0000123 [Term] id: AEO:0000137 name: nerve namespace: anatomical_entity_ontology def: "A group of neurons that provides a nervous supply." [AEO:JB] alt_id: EHDAA2:0003137 is_a: AEO:0000123 [Term] id: AEO:0000138 name: nerve plexus namespace: anatomical_entity_ontology def: "A complex of interconnecting nerves." [AEO:JB] alt_id: EHDAA2:0003138 is_a: AEO:0000123 [Term] id: AEO:0000141 name: smooth muscle tissue namespace: anatomical_entity_ontology def: "A tissue composed of smooth muscle cells." [AEO:JB] alt_id: EHDAA2:0003141 is_a: AEO:0000122 [Term] id: AEO:0000140 name: striated muscle tissue namespace: anatomical_entity_ontology def: "A tissue composed of striated muscle cells." [AEO:JB] alt_id: EHDAA2:0003140 is_a: AEO:0000122 [Term] id: AEO:0000040 name: acellular anatomical structure namespace: anatomical_entity_ontology def: "Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue." [CARO:MAH] alt_id: EHDAA2:0003040 alt_id: CARO:0000040 alt_id: UBERON:0000476 is_a: AEO:0000003 [Term] id: AEO:0000042 name: extraembryonic structure namespace: anatomical_entity_ontology def: "Anatomical structure that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo." [CARO:MAH] alt_id: EHDAA2:0003042 alt_id: CARO:0000042 alt_id: UBERON:0000478 is_a: AEO:0000003 [Term] id: AEO:0000041 name: anatomical cluster namespace: anatomical_entity_ontology def: "Anatomical group that has its parts adjacent to one another. Anatomical structure\, which has as its parts a heterogeneous collection of organs\, organ parts\, cells or body part subdivisions that are adjacent to\, or continuous with one another; does not constitute an organ\, organ system or organ system subdivision\, or body part or body part subdivision." [CARO:MAH] alt_id: EHDAA2:0003041 alt_id: CARO:0000041 alt_id: UBERON:0000477 is_a: AEO:0000054 [Term] id: AEO:0000024 name: compound organ namespace: anatomical_entity_ontology def: "Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types." [CARO:MAH] alt_id: EHDAA2:0003024 alt_id: CARO:0000024 is_a: AEO:0000003 [Term] id: AEO:0000168 name: skeletal system namespace: anatomical_entity_ontology def: "The rigid support system for the body." [AEO:JB] alt_id: EHDAA2:0003168 is_a: AEO:0000011 [Term] id: AEO:0000169 name: embryo namespace: anatomical_entity_ontology def: "That part of the conceptus that will form the organism." [AEO:JB] alt_id: EHDAA2:0003169 alt_id: ZFA:0001105 relationship: part_of AEO:0000194 is_a: AEO:0000191 [Term] id: AEO:000020 name: fat tissue namespace: anatomical_entity_ontology def: "Tissue that is predominantly made of fat cells." [AEO:JB] alt_id: EHDAA2:0003120 is_a: AEO:0000043 [Term] id: AEO:0000174 name: gender-specific anatomical structure namespace: anatomical_entity_ontology def: "A part of the body present only in a specific gender." [AEO:JB] alt_id: EHDAA2:0003174 is_a: AEO:0000003 [Term] id: AEO:0000173 name: surface sense organ namespace: anatomical_entity_ontology def: "Multicellular anatomical structure with largely bona fide boundary that extends outwards from or is part of the organism surface and transduces some sensory stimulus to the nervous system." [AEO:JB] alt_id: EHDAA2:0003173 relationship: part_of AEO:0000154 is_a: AEO:0000094 [Term] id: AEO:0000172 name: limb namespace: anatomical_entity_ontology def: "Appendage of an animal used for locomotion or grasping." [AEO:JB] alt_id: EHDAA2:0003172 is_a: AEO:0000193 [Term] id: AEO:0000171 name: primordium namespace: anatomical_entity_ontology def: "Primordia are populations of contiguous cells that are morphologically distinct and already correspond in extent to a later organ/tissue." [AEO:JB] alt_id: EHDAA2:0003171 is_a: AEO:0000125 [Term] id: AEO:0000170 name: anlage namespace: anatomical_entity_ontology def: "Anlagen are populations of contiguous cells\, typically arranged in one plane\, that are morphologically indistinct\, but that already correspond in extent to a later organ/tissue." [AEO:JB] alt_id: EHDAA2:0003170 is_a: AEO:0000125 [Term] id: AEO:0000010 name: anatomical surface feature namespace: anatomical_entity_ontology def: "Non-material anatomical entity of two dimensions\, that is demarcated by anatomical lines or points on the external or internal surfaces of anatomical structures." [CARO:MAH] alt_id: EHDAA2:0003010 alt_id: CARO:0000010 exact_synonym: "anatomical surface." [] is_a: AEO:0000192 [Term] id: AEO:0000011 name: anatomical system namespace: anatomical_entity_ontology def: "Anatomical group that is has as its parts distinct anatomical structures interconnected by anatomical structures at a lower level of granularity." [CARO:MAH] alt_id: EHDAA2:0003011 alt_id: CARO:0000011 is_a: AEO:0000054 [Term] id: AEO:0000013 name: single-cell tissue namespace: anatomical_entity_ontology def: "Anatomical structure composed of a single cell." [CARO:MAH] alt_id: EHDAA2:0003013 is_a: AEO:0000043 [Term] id: AEO:0000019 name: compound organ component namespace: anatomical_entity_ontology def: "Multi-tissue structure that is part of a compound organ." [CARO:MAH] alt_id: EHDAA2:0003019 alt_id: CARO:0000019 relationship: part_of AEO:0000024 is_a: AEO:0000055 [Term] id: AEO:0000153 name: mesenchymal tissue with stem cells namespace: anatomical_entity_ontology def: "Multi-tissue mesenchymal structure one of whose parts contains stem cells that can replace other parts." [AEO:JB] alt_id: EHDAA2:0003153 is_a: AEO:0000187 [Term] id: AEO:0000154 name: organism surface namespace: anatomical_entity_ontology def: "The collection of structures that form the exxtenal covering of the organism." [AEO:JB] alt_id: EHDAA2:0003154 is_a: AEO:0000032 [Term] id: AEO:0000209 name: vein namespace: http\://www.xspan.org/obo.owl# def: "An epithelial tube that transports blood towards the heart." [AEO:JB] alt_id: EHDAA2:0003254 is_a: AEO:0000207 [Term] id: AEO:0000161 name: groove namespace: anatomical_entity_ontology def: "A furrow or an incomplete tube." [AEO:JB] alt_id: EHDAA2:0003161 is_a: AEO:0000010 [Term] id: AEO:0000098 name: ductless gland namespace: anatomical_entity_ontology def: "A gland that releases its secretion directly into the bloodstream\, or equivalent for an invertebrate." [AEO:JB] alt_id: EHDAA2:0003098 synonym: "endocrine gland." [AEO:JB] is_a: AEO:0000096 [Term] id: AEO:0000162 name: ridge namespace: anatomical_entity_ontology def: "A raised strip of tissue." [AEO:JB] alt_id: EHDAA2:0003162 is_a: AEO:0000010 [Term] id: AEO:0000099 name: keratin-based structure namespace: anatomical_entity_ontology def: "Acellular anatomical structure whose predominant constituent is keratin." [AEO:JB] alt_id: EHDAA2:0003099 is_a: AEO:0000040 [Term] id: AEO:0000205 name: protuberance namespace: http\://www.xspan.org/obo.owl# def: "A roughly circular bulge in a surface." [AEO:JB] alt_id: EHDAA2:0003250 is_a: AEO:0000010 [Term] id: AEO:0000206 name: migrating epithelium namespace: http\://www.xspan.org/obo.owl# def: "An epithelium that extends its surface area by peripheral movement." [AEO:JB] alt_id: EHDAA2:0003251 is_a: AEO:0000066 [Term] id: AEO:0000207 name: blood vessel namespace: http\://www.xspan.org/obo.owl# def: "An epithelial tube that transports blood." [AEO:JB] alt_id: EHDAA2:0003252 is_a: AEO:0000116 [Term] id: AEO:0000208 name: artery namespace: http\://www.xspan.org/obo.owl# def: "An epithelial tube that transports blood away from the heart." [AEO:JB] alt_id: EHDAA2:0003253 is_a: AEO:0000207 [Term] id: AEO:0000201 name: afferent nerve namespace: http\://www.xspan.org/obo.owl# def: "A group of neurons that provides a nervous response from a tissue." [AEO:JB] alt_id: EHDAA2:0003200 is_a: AEO:0000137 [Term] id: AEO:0000202 name: efferent nerve namespace: http\://www.xspan.org/obo.owl# def: "A group of neurons that provides a nervous signal to a tissue." [AEO:JB] alt_id: EHDAA2:0003231 is_a: AEO:0000137 [Term] id: AEO:0000203 name: syncytium namespace: http\://www.xspan.org/obo.owl# def: "An anatomical entity consisting of a single or a few multinucleated structures." [AEO.:JB] alt_id: HDAA2:0003248 is_a: AEO:0000043 [Term] id: AEO:0000204 name: pit namespace: http\://www.xspan.org/obo.owl# def: "An roughly circular indentation in a surface." [AEO:JB] alt_id: EHDAA2:003249 is_a: AEO:0000010 [Term] id: AEO:0000200 name: regenerating anatomical structure namespace: anatomical_entity_ontology def: "An anatomical structure that\, as part of its normal physiology\, undergoes regeneration. Examples include endometrium and antlers." [AEO:JB] alt_id: EHDAA2:0003233 is_a: AEO:0000003 [Typedef] id: type name: type [Typedef] id: PARTOF name: PARTOF [Typedef] id: part_of name: part_of [Typedef] id: participates_in name: participates_in [Typedef] id: capable_of_producing? name: capable_of_producing? [Typedef] id: ISA name: ISA