Bioportal mappings to Phenotypic quality (PATO) ver1.221
Bioportal mappings to BRENDA tissue / enzyme source (BTO) ver1.3
Bioportal mappings to Microarray experimental conditions (MO) ver1.3.1.1
Tomasz Adamusiak
Bioportal mappings to Zebrafish anatomy and development (ZFA) ver1.27
Bioportal mappings to Units of measurement (UO) ver1.27
Bioportal mappings to SNOMED Clinical Terms (SNOMEDCT) ver2009_07_31
Bioportal mappings to NCBI organismal classification (null) ver1.2
Bioportal mappings to MGED Ontology (MO) ver1.3.1.1
Bioportal mappings to Human disease (DOID) ver1.192
Helen Parkinson
Mappings:The Arabidopsis Information Resource (TAIR)
Bioportal mappings to International Classification of Diseases (ICD-9) ver9
classified
Bioportal mappings to Foundational Model of Anatomy (FMA) ver3.0
Date: 22nd September 2010:
Bioportal mappings to Minimal anatomical terminology (MAT) ver1.1
Mappings to Plant structure (PO)
Mappings: CRISP Thesaurus Version 2.5.2.0
Bioportal mappings to Malaria Ontology (IDOMAL) ver1.1
Bioportal mappings to Chemical entities of biological interest (CHEBI) ver1.66
Bioportal mappings to Medical Subject Headings (MSH) ver2010_2009_08_17
Bioportal mappings to Mosquito gross anatomy (TGMA) ver1.10
Bioportal mappings to Gene Ontology (GO) ver1.886
James Malone
Mappings: The Jackson Lab
Bioportal mappings to Drosophila gross anatomy (FBbt) ver1.33
Bioportal mappings to NCI Thesaurus (NCIt) ver10.01
Bioportal mappings to Teleost anatomy and development (TAO) ver1.158
2.6.1
Bioportal mappings to Mammalian phenotype (MP) ver1.347
Ele Holloway
Bioportal mappings to Ontology for Biomedical Investigations (OBI) ver2009-11-06 Philly (aka version 1.0) Release Candidate
Bioportal mappings to NIFSTD (nif) ver1.8
Bioportal mappings to Cell type (CL) ver1.43
stage I endometrioid carcinoma
James Malone
NCIt:C49218
MA:0001724
cervix epithelium
James Malone
D341Med
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311958
CS57537 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311958
CS57537
James Malone
GM11994
James Malone
MO_562
cell line
true
A cell line is a cell factor which describes a population of cells cultured in vitro that are descended through one or more generations (and possible sub-cultures) from a single primary culture which was originally derived from part of an organism. The cells of such a population share common characteristics.
Jie Zheng
Tomasz Adamusiak
James Malone
Atwood et al (2000) OED of Biochemistry and Molecular Biology, Oxford University Press.
FBbt:00001779
haltere disc
haltere disc[accessedResource: FBbt:00001779][accessDate: 10-05-2010]
dorsal metathoracic disc
James Malone
A dicarboxylic acid amide that has formula C2H3NO3.
InChIKey=SOWBFZRMHSNYGE-YPUDGCQOCP
C2H3NO3
oxamic acid
NC(=O)C(O)=O
Oxamate
http://www.ebi.ac.uk/efo/EFO_0001588
amino(oxo)acetic acid
InChI=1/C2H3NO3/c3-1(4)2(5)6/h(H2,3,4)(H,5,6)/f/h5H,3H2
CHEBI:18058
Oxalic monoamide
pancreatic endoderm
Tomasz Adamusiak
Jie Zheng
COCM - Congestive cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
Primary dilated cardiomyopathy (disorder)
Cardiomyopathy, Dilated, CMD1A[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Primary dilated cardiomyopathy[accessedResource: SNOMEDCT:195021004][accessDate: 10-05-2010]
SNOMEDCT:399020009
Familial Idiopathic Cardiomyopathies
DCM - Dilated cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
Congestive cardiomyopathy (disorder)
Cardiomyopathy, Dilated
Cardiomyopathy, Dilated, LMNA[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Cardiomyopathies, Congestive[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Congestive Cardiomyopathies
Congestive dilated cardiomyopathy
A form of CARDIAC MUSCLE disease that is characterized by ventricular dilation, VENTRICULAR DYSFUNCTION, and HEART FAILURE. Risk factors include SMOKING; ALCOHOL DRINKING; HYPERTENSION; INFECTION; PREGNANCY; and mutations in the LMNA gene encoding LAMIN TYPE A, a NUCLEAR LAMINA protein.
Cardiomyopathy, Familial Idiopathic[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Cardiomyopathy, Congestive[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Cardiomyopathy, Dilated, with Conduction Deffect1
Dilated cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
Cardiomyopathy, Congestive
James Malone
Cardiomyopathies, Dilated
Congestive cardiomyopathy (disorder)[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
MSH:D002311
A form of CARDIAC MUSCLE disease that is characterized by ventricular dilation, VENTRICULAR DYSFUNCTION, and HEART FAILURE. Risk factors include SMOKING; ALCOHOL DRINKING; HYPERTENSION; INFECTION; PREGNANCY; and mutations in the LMNA gene encoding LAMIN TYPE A, a NUCLEAR LAMINA protein.[accessedResource: MSH:D002311][accessDate: 10-05-2010]
1.7
Cardiomyopathy, Dilated, with Conduction Deffect1[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Cardiomyopathy, Dilated, CMD1A
Familial Idiopathic Cardiomyopathy
Congestive dilated cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
COCM - Congestive cardiomyopathy
Cardiomyopathy, Dilated, LMNA
Primary dilated cardiomyopathy
DCM - Dilated cardiomyopathy
SNOMEDCT:195021004
Tomasz Adamusiak
Cardiomyopathies, Dilated[accessedResource: MSH:D002311][accessDate: 10-05-2010]
primary dilated cardiomyopathy (disorder)[accessedResource: DOID:12930][accessDate: 10-05-2010]
CCM - Congestive cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
Same as dilated cardiomyopathy EFO_0000407
DOID:12930
true
CCM - Congestive cardiomyopathy
obsolete_congestive cardiomyopathy
Idiopathic Cardiomyopathies, Familial[accessedResource: MSH:D002311][accessDate: 10-05-2010]
synonymous with protocol
true
A protocol factor is an experimental factor which describes factors that describe the protocol design of an experiment.
obsolete_protocol factor
James Malone
A polychlorinated dibenzodioxine that has formula C12H4Cl4O2.
2,3,7,8-tetrachlorodibenzodioxine
TCDD
C12H4Cl4O2
Tetrachlorodibenzodioxin
CHEBI:28119
dioxine
2,3,7,8-Tetrachlorodibenzo-p-dioxin
2,3,7,8-tetrachlorooxanthrene
InChI=1/C12H4Cl4O2/c13-5-1-9-10(2-6(5)14)18-12-4-8(16)7(15)3-11(12)17-9/h1-4H
InChIKey=HGUFODBRKLSHSI-UHFFFAOYAA
2,3,7,8-Tetrachlorodibenzodioxin
http://www.ebi.ac.uk/efo/EFO_0001470
Dioxin
Clc1cc2Oc3cc(Cl)c(Cl)cc3Oc2cc1Cl
tetradioxin
nerve cell
CL:0000540
neuron[accessedResource: CL:0000540][accessDate: 10-05-2010]
nerve cell[accessedResource: CL:0000540][accessDate: 10-05-2010]
neuron
obsolete_nerve cell
The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.[accessedResource: CL:0000540][accessDate: 10-05-2010]
1.8
Detected as synonym for neuron, deprecated in favour of it.
true
The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.
James Malone
SAEL:71
EMAPA:16469
ZFA:0000396
All the nerve centers and nerve fibers in the central, visceral and peripheral nervous systems.[accessedResource: FBbt:00005093][accessDate: 10-05-2010]
XAO:0000177
nervous system
MAT:0000026
NIFSTD:birnlex_844
FMAID:7157
EHDAA:826
A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS).
AAO:0000324
TAO:0000396
EV:0100162
WBbt:0005735
James Malone
Tomasz Adamusiak
FBbt:00005093
The nervous system is essentially a biological information highway, and is responsible for controlling all the biological processes and movement in the body, and can also receive information and interpret it via electrical signals which are used in this nervous system. It consists of the Central Nervous System (CNS), essentially the processing area and the Peripheral Nervous System which detects and sends electrical impulses that are used in the nervous system.[accessedResource: BTO:0001484][accessDate: 10-05-2010]
All the nerve centers and nerve fibers in the central, visceral and peripheral nervous systems.
A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS). (Source: BioGlossary, www.Biology-Text.com)[accessedResource: TAO:0000396][accessDate: 10-05-2010]
The nervous system is essentially a biological information highway, and is responsible for controlling all the biological processes and movement in the body, and can also receive information and interpret it via electrical signals which are used in this nervous system. It consists of the Central Nervous System (CNS), essentially the processing area and the Peripheral Nervous System which detects and sends electrical impulses that are used in the nervous system.
A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS).[accessedResource: ZFA:0000396][accessDate: 10-05-2010]
BTO:0001484
MA:0000016
A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS). (Source: BioGlossary, www.Biology-Text.com)
http://www.ebi.ac.uk/efo/EFO_0001447
Archaea
James Malone
Blood pumping organ composed of four components: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus.
EHDAA:420
Organ with cavitated organ parts, which is continuous with the systemic and
pulmonary arterial and venous trees. Examples: There is only one heart.
1: A hollow muscular organ of vertebrate animals that by its rhythmic contraction acts as a force pump maintaining the circulation of the blood. n2: A structure in an invertebrate animal functionally analogous to the vertebrate heart.[accessedResource: BTO:0000562][accessDate: 10-05-2010]
FBbt:00003154
TAO:0000114
EV:0100018
XAO:0000064
1: A hollow muscular organ of vertebrate animals that by its rhythmic contraction acts as a force pump maintaining the circulation of the blood. n2: A structure in an invertebrate animal functionally analogous to the vertebrate heart.
heart
ZFA:0000114
Blood pumping organ composed of four components: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus.[accessedResource: ZFA:0000114][accessDate: 10-05-2010]
FMAID:7088
SAEL:47
James Malone
Blood pumping organ composed of four chambers: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus.
TADS:0000147
EMAPA:16105
Blood pumping organ composed of four chambers: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus.[accessedResource: TAO:0000114][accessDate: 10-05-2010]
BTO:0000562
MFO:0080860
MAT:0000036
Organ with cavitated organ parts, which is continuous with the systemic and
pulmonary arterial and venous trees. Examples: There is only one heart.[accessedResource: FMAID:7088][accessDate: 10-05-2010]
9ALPHA-FLUOROCORTISOL
fludrocortisona
[H][C@@]12CC[C@](O)(C(=O)CO)[C@@]1(C)C[C@H](O)[C@@]3(F)[C@@]2([H])CCC4=CC(=O)CC[C@]34C
A mineralocorticoid that has formula C21H29FO5.
C21H29FO5
InChI=1/C21H29FO5/c1-18-7-5-13(24)9-12(18)3-4-15-14-6-8-20(27,17(26)11-23)19(14,2)10-16(25)21(15,18)22/h9,14-16,23,25,27H,3-8,10-11H2,1-2H3/t14-,15-,16-,18-,19-,20-,21-/m0/s1
fludrocortisonum
InChIKey=AAXVEMMRQDVLJB-BULBTXNYBK
CHEBI:50885
9-fluoro-11beta,17,21-trihydroxypregn-4-ene-3,20-dione
fludrocortisone
http://www.ebi.ac.uk/efo/EFO_0001536
A rounded thick modified underground stem base bearing membranous or scaly leaves and buds and acting as a vegetative reproductive structure.
GRO:0005787
corm
MAT:0000368
James Malone
A rounded thick modified underground stem base bearing membranous or scaly leaves and buds and acting as a vegetative reproductive structure.[accessedResource: BTO:0000285][accessDate: 10-05-2010]
GRO:0005787[accessedResource: BTO:0000285][accessDate: 10-05-2010]
BTO:0000285
synonym with material entity
true
obsolete_sample factor
A process in which an organism or part of an organism participates towards the generation of offspring.
reproductive process
James Malone
James Malone
Secondary olfactory cortex
Secondary olfactory cortical area (Carpenter)[accessedResource: FMA:72356][accessDate: 10-05-2010]
Entorhinal area[accessedResource: FMA:72356][accessDate: 10-05-2010]
entorhinal cortex
FMA:72356
Secondary olfactory cortical area (Carpenter)
Area 28 of Brodmann (Crosby)
Entorhinal area
Secondary olfactory cortex[accessedResource: FMA:72356][accessDate: 10-05-2010]
Area 28 of Brodmann (Crosby)[accessedResource: FMA:72356][accessDate: 10-05-2010]
SM1
James Malone
Ele Holloway
Dorsal skin is a skin found at the dorsal area of an animal.
dorsal skin
James Malone
BCBL-1
James Malone
Ele Holloway
James Malone
Ele Holloway
A BM1604 is a cell line.
A BM1604 is all of the following: something that is bearer of a prostate carcinoma, something that derives from a homo sapiens, and something that derives from a prostate.
BM1604
Natural Language Generator 8th April 2010
Drosophila melanogaster cell line
http://www.ebi.ac.uk/efo/EFO_0001491
Cn1cnc(c1Sc1ncnc2nc[nH]c12)[N+]([O-])=O
InChI=1/C9H7N7O2S/c1-15-4-14-7(16(17)18)9(15)19-8-5-6(11-2-10-5)12-3-13-8/h2-4H,1H3,(H,10,11,12,13)/f/h10H
azathioprine
6-((1-Methyl-4-nitro-1H-imidazol-5-yl)thio)-1H-purine
C9H7N7O2S
InChIKey=LMEKQMALGUDUQG-KZFATGLACK
CHEBI:2948
Imuran (TN)
A thiopurine that has formula C9H7N7O2S.
6-(1'-Methyl-4'-nitro-5'-imidazolyl)-mercaptopurine
6-[(1-methyl-4-nitro-1H-imidazol-5-yl)sulfanyl]-7H-purine
James Malone
MAT:0000514
plant reproductive system structure
James Malone
CN(N=O)C(=O)N[C@H]1[C@@H](O)O[C@H](CO)[C@@H](O)[C@@H]1O
Streptozocin (TN ZANOSAR)
A N-acylglucosamine that has formula C8H15N3O7.
streptozotocin
InChIKey=ZSJLQEPLLKMAKR-CQRXUCDYDU
streptozocin
C8H15N3O7
2-Deoxy-2-(3-methyl-3-nitrosoureido)-D-glucopyranose
http://www.ebi.ac.uk/efo/EFO_0001615
Zanosar
James Malone
CHEBI:9288
InChI=1/C8H15N3O7/c1-11(10-17)8(16)9-4-6(14)5(13)3(2-12)18-7(4)15/h3-7,12-15H,2H2,1H3,(H,9,16)/t3-,4-,5-,6-,7+/m1/s1/f/h9H
2-Deoxy-2-(((methylnitrosoamino)carbonyl)amino)-D-glucopyranose
2-deoxy-2-{[methyl(nitroso)carbamoyl]amino}-alpha-D-glucopyranose
N-D-Glucosyl-(2)-N'-nitrosomethylurea
MO_849
The process of bringing about genetic alteration of any cell or organism by a variety of means including recombinant DNA technology, viruses, chemical mutagens and X-rays.
transfection
Tomasz Adamusiak
Jie Zheng
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158835&type=germplasm
CS57811 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158835&type=germplasm
CS57811
James Malone
http://jaxmice.jax.org/strain/009283.html
ILSXISS92/TejJ
Tomasz Adamusiak
SBC-3
James Malone
Ele Holloway
A SBC-3 is a cell line.
A SBC-3 is both something that is bearer of a small cell lung carcinoma, and something that derives from a
Homo sapiens.
JCRB0818
astrocytoma, anaplastic (morphologic abnormality)
Ele Holloway
astrocytoma, anaplastic (morphologic abnormality)[accessedResource: DOID:3078][accessDate: 10-05-2010]
James Malone
grade III Astrocytic tumor
DOID:3078
anaplastic astrocytoma
grade III Astrocytic tumor[accessedResource: DOID:3078][accessDate: 10-05-2010]
BTO:0000088
SAEL:16
EV:0100017
FBbt:00005057
cardiovascular system
FMAID:7161
Organ system which consists of the heart, the systemic and pulmonary arterial and venous system, the lymphatic and the portal venous system.
MAT:0000016
CV system[accessedResource: FMAID:7161][accessDate: 10-05-2010]
ZFA:0000010
MA:0000010
XAO:0000100
James Malone
TAO:0000010
MFO:000290
EHDAA:394
The system of heart and blood vessels.
The system of heart and blood vessels.[accessedResource: BTO:0000088][accessDate: 10-05-2010]
Organ system which consists of the heart, the systemic and pulmonary arterial and venous system, the lymphatic and the portal venous system.[accessedResource: FMAID:7161][accessDate: 10-05-2010]
circulatory system[accessedResource: MAT:0000016][accessDate: 10-05-2010]
TADS:0000146
EMAPA:16104
circulatory system
CV system
CHEBI:5931
http://www.ebi.ac.uk/efo/EFO_0001673
insulin
James Malone
U87
James Malone
OE33
James Malone
Ele Holloway
GeneRIF:15476444
GeneRIF:12614934
GeneRIF:16115812
Huntington's
GeneRIF:12706247
GeneRIF:12008025
Chronic Progressive Hereditary Chorea (Huntington)
GeneRIF:15644269
HUNTINGTONS DIS[accessedResource: MSH:D006816][accessDate: 10-05-2010]
GeneRIF:16054230
NIFSTD:birnlex_12500
GeneRIF:12657678
GeneRIF:12691731
GeneRIF:14981075
HUNTINGTON DIS
GeneRIF:12890790
GeneRIF:14522959
Huntington Disease, Juvenile[accessedResource: MSH:D006816][accessDate: 10-05-2010]
GeneRIF:12915485
GeneRIF:15359012
GeneRIF:15383276
HD - Huntington chorea[accessedResource: SNOMEDCT:58756001][accessDate: 10-05-2010]
HC - Huntington chorea
GeneRIF:11817536
Huntington's chorea (disorder)
GeneRIF:15922606
HD[accessedResource: DOID:12858][accessDate: 10-05-2010]
A familial disorder inherited as an autosomal dominant trait and characterized by the onset of progressive CHOREA and DEMENTIA in the fourth or fifth decade of life. Common initial manifestations include paranoia; poor impulse control; DEPRESSION; HALLUCINATIONS; and DELUSIONS. Eventually intellectual impairment; loss of fine motor control; ATHETOSIS; and diffuse chorea involving axial and limb musculature develops, leading to a vegetative state within 10-15 years of disease onset. The juvenile variant has a more fulminant course including SEIZURES; ATAXIA; dementia; and chorea. (From Adams et al., Principles of Neurology, 6th ed, pp1060-4)
GeneRIF:14985389
GeneRIF:12952868
HUNTINGTON DIS LATE ONSET[accessedResource: MSH:D006816][accessDate: 10-05-2010]
HD - Huntington chorea
GeneRIF:15934928
GeneRIF:15878807
GeneRIF:15715085
GeneRIF:15057517
Akinetic Rigid Variant of Huntington Disease
Huntington Disease, Juvenile-Onset[accessedResource: MSH:D006816][accessDate: 10-05-2010]
GeneRIF:11432963
Chronic progressive hereditary chorea
Huntington's disease pathway
Huntington's disease
Huntington Disease, Juvenile-Onset
Tomasz Adamusiak
GeneRIF:11914418
GeneRIF:12078510
GeneRIF:12736330
GeneRIF:12969257
GeneRIF:11813242
Huntington's[accessedResource: NIFSTD:birnlex_12500][accessDate: 10-05-2010]
Huntington's chorea (disorder)[accessedResource: SNOMEDCT:58756001][accessDate: 10-05-2010]
Huntington Disease, Akinetic Rigid Variant
Juvenile Huntington Disease
Huntington disease
Huntington Chorea[accessedResource: MSH:D006816][accessDate: 10-05-2010]
MSH:D006816
JUVENILE ONSET HUNTINGTON DIS[accessedResource: MSH:D006816][accessDate: 10-05-2010]
GeneRIF:15817265
A familial disorder inherited as an autosomal dominant trait and characterized by the onset of progressive CHOREA and DEMENTIA in the fourth or fifth decade of life. Common initial manifestations include paranoia; poor impulse control; DEPRESSION; HALLUCINATIONS; and DELUSIONS. Eventually intellectual impairment; loss of fine motor control; ATHETOSIS; and diffuse chorea involving axial and limb musculature develops, leading to a vegetative state within 10-15 years of disease onset. The juvenile variant has a more fulminant course including SEIZURES; ATAXIA; dementia; and chorea.
Chronic progressive chorea[accessedResource: SNOMEDCT:58756001][accessDate: 10-05-2010]
Chorea, Chronic Progressive Hereditary (Huntington)[accessedResource: MSH:D006816][accessDate: 10-05-2010]
SNOMEDCT:58756001
GeneRIF:16184606
Chronic progressive chorea
HC - Huntington chorea[accessedResource: SNOMEDCT:58756001][accessDate: 10-05-2010]
GeneRIF:15033177
GeneRIF:11593450
GeneRIF:15843398
HUNTINGTON DIS JUVENILE[accessedResource: MSH:D006816][accessDate: 10-05-2010]
GeneRIF:15880743
Akinetic-Rigid Variant of Huntington Disease[accessedResource: MSH:D006816][accessDate: 10-05-2010]
AKINETIC RIGID VARIANT HUNTINGTON DIS[accessedResource: MSH:D006816][accessDate: 10-05-2010]
GeneRIF:12682342
GeneRIF:12960759
HD
Chorea, Huntington
GeneRIF:15167689
Huntington's disease pathway[accessedResource: DOID:12858][accessDate: 10-05-2010]
ICD9:333.4
A familial disorder inherited as an autosomal dominant trait and characterized by the onset of progressive CHOREA and DEMENTIA in the fourth or fifth decade of life. Common initial manifestations include paranoia; poor impulse control; DEPRESSION; HALLUCINATIONS; and DELUSIONS. Eventually intellectual impairment; loss of fine motor control; ATHETOSIS; and diffuse chorea involving axial and limb musculature develops, leading to a vegetative state within 10-15 years of disease onset. The juvenile variant has a more fulminant course including SEIZURES; ATAXIA; dementia; and chorea.[accessedResource: NIFSTD:birnlex_12500][accessDate: 10-05-2010]
GeneRIF:15845076
GeneRIF:15496672
GeneRIF:14511117
Huntington Disease, Late Onset[accessedResource: MSH:D006816][accessDate: 10-05-2010]
GeneRIF:14725621
DOID:12858
GeneRIF:14751289
GeneRIF:15742215
LATE ONSET HUNTINGTON DIS
GeneRIF:12604778
GeneRIF:12950446
GeneRIF:15009635
GeneRIF:12531510
JUVENILE HUNTINGTON DIS
A familial disorder inherited as an autosomal dominant trait and characterized by the onset of progressive CHOREA and DEMENTIA in the fourth or fifth decade of life. Common initial manifestations include paranoia; poor impulse control; DEPRESSION; HALLUCINATIONS; and DELUSIONS. Eventually intellectual impairment; loss of fine motor control; ATHETOSIS; and diffuse chorea involving axial and limb musculature develops, leading to a vegetative state within 10-15 years of disease onset. The juvenile variant has a more fulminant course including SEIZURES; ATAXIA; dementia; and chorea. (From Adams et al., Principles of Neurology, 6th ed, pp1060-4)[accessedResource: MSH:D006816][accessDate: 10-05-2010]
GeneRIF:12528814
HUNTINGTON DIS AKINETIC RIGID VARIANT
GeneRIF:15029481
James Malone
Huntington disease[accessedResource: NIFSTD:birnlex_12500][accessDate: 10-05-2010]
GeneRIF:12781994
Huntington Disease, Akinetic-Rigid Variant[accessedResource: MSH:D006816][accessDate: 10-05-2010]
HUNTINGTONS DIS
JUVENILE ONSET HUNTINGTON DIS
GeneRIF:14978262
GeneRIF:15261377
Huntington's chorea[accessedResource: ICD9:333.4][accessDate: 10-05-2010]
HUNTINGTON DIS[accessedResource: MSH:D006816][accessDate: 10-05-2010]
GeneRIF:15749339
HUNTINGTON'S CHOREA
GeneRIF:15337316
Chronic progressive hereditary chorea[accessedResource: SNOMEDCT:58756001][accessDate: 10-05-2010]
Huntington Disease, Late Onset
GeneRIF:12918063
Adenocarcinoma of the Lung[accessedResource: NCIt:C3512][accessDate: 10-05-2010]
GeneRIF:11836605
GeneRIF:12374671
GeneRIF:14634100
adenocarcinoma of lung
GeneRIF:12923324
GeneRIF:12687616
GeneRIF:15815931
GeneRIF:15709189
GeneRIF:12883699
GeneRIF:16109772
GeneRIF:12114441
GeneRIF:14996858
GeneRIF:11957142
GeneRIF:15819721
GeneRIF:12503077
A carcinoma characterized by the presence of malignant glandular epithelial cells. There is a male predilection with a male to female ratio of 2:1. Usually lung adenocarcinoma is asymptomatic and is identified through screening studies or as an incidental radiologic finding. If clinical symptoms are present they include shortness of breath, cough, hemoptysis, chest pain, and fever. Tobacco smoke is a known risk factor.
GeneRIF:15688187
GeneRIF:11891209
GeneRIF:14633739
GeneRIF:15660698
James Malone
GeneRIF:12414512
GeneRIF:12579497
DOID:3910
GeneRIF:12163326
adenocarcinoma of lung[accessedResource: DOID:3910][accessDate: 10-05-2010]
GeneRIF:11801602
GeneRIF:15197584
GeneRIF:12698189
GeneRIF:12164330
GeneRIF:12942568
GeneRIF:12420220
GeneRIF:16232198
GeneRIF:14735190
GeneRIF:12824892
GeneRIF:15944787
A carcinoma characterized by the presence of malignant glandular epithelial cells. There is a male predilection with a male to female ratio of 2:1. Usually lung adenocarcinoma is asymptomatic and is identified through screening studies or as an incidental radiologic finding. If clinical symptoms are present they include shortness of breath, cough, hemoptysis, chest pain, and fever. Tobacco smoke is a known risk factor.[accessedResource: NCIt:C3512][accessDate: 10-05-2010]
GeneRIF:16184720
GeneRIF:15809747
GeneRIF:16116610
NCIt:C3512
GeneRIF:8564085
GeneRIF:15976377
GeneRIF:14607333
Adenocarcinoma of lung (disorder)
GeneRIF:15943786
GeneRIF:15216431
GeneRIF:12234996
GeneRIF:14511407
GeneRIF:12152160
SNOMEDCT:254626006
lung adenocarcinoma
Adenocarcinoma of the Lung
GeneRIF:16061866
GeneRIF:12644570
adenocarcinoma of lung (disorder)[accessedResource: DOID:3910][accessDate: 10-05-2010]
GeneRIF:14744769
GeneRIF:16108829
NCIt:C27263
A sarcoma that is composed of spindle cells with a rich vascular network.
Spindle Cell Neoplasm
hemangiopericytoma[accessedResource: DOID:2414][accessDate: 10-05-2010]
spindle cell tumor
James Malone
hemangiopericytoma
spindle cell neoplasm[accessedResource: DOID:2414][accessDate: 10-05-2010]
A sarcoma that is composed of spindle cells with a rich vascular network.[accessedResource: DOID:2414][accessDate: 10-05-2010]
DOID:2414
SNOMEDCT:404053004
A rapidly growing malignant mesenchymal neoplasm. It is characterized by the presence of round cells with myoblastic differentiation and a fibrovascular stroma resembling an alveolar growth pattern. The tumor usually presents in the extremities.[accessedResource: NCIt:C3749][accessDate: 10-05-2010]
alveolar rhabdomyosarcoma
James Malone
Alveolar rhabdomyosarcoma (disorder)[accessedResource: SNOMEDCT:404053004][accessDate: 10-05-2010]
GeneRIF:15140004
GeneRIF:11846302
A form of RHABDOMYOSARCOMA occurring mainly in adolescents and young adults, affecting muscles of the extremities, trunk, orbital region, etc. It is extremely malignant, metastasizing widely at an early stage. Few cures have been achieved and the prognosis is poor. "Alveolar" refers to its microscopic appearance simulating the cells of the respiratory alveolus. (Holland et al., Cancer Medicine, 3d ed, p2188)
Alveolar rhabdomyosarcoma (morphologic abnormality)
GeneRIF:16157701
A form of RHABDOMYOSARCOMA occurring mainly in adolescents and young adults, affecting muscles of the extremities, trunk, orbital region, etc. It is extremely malignant, metastasizing widely at an early stage. Few cures have been achieved and the prognosis is poor. "Alveolar" refers to its microscopic appearance simulating the cells of the respiratory alveolus. (Holland et al., Cancer Medicine, 3d ed, p2188)[accessedResource: MSH:D018232][accessDate: 10-05-2010]
MSH:D018232
A rapidly growing malignant mesenchymal neoplasm. It is characterized by the presence of round cells with myoblastic differentiation and a fibrovascular stroma resembling an alveolar growth pattern. The tumor usually presents in the extremities.
Alveolar rhabdomyosarcoma (morphologic abnormality)[accessedResource: DOID:4051][accessDate: 10-05-2010]
Rhabdomyosarcomas, Alveolar[accessedResource: MSH:D018232][accessDate: 10-05-2010]
SNOMEDCT:63449009
Alveolar rhabdomyosarcoma (disorder)
DOID:4051
Alveolar Rhabdomyosarcomas
NCIt:C3749
GeneRIF:12039929
CL:0000839
A progenitor cell of any myeloid lineage, potentially multipotent.
A progenitor cell of any myeloid lineage, potentially multipotent.[accessedResource: CL:0000839][accessDate: 10-05-2010]
myeloid progenitor cell
Tomasz Adamusiak
FBbt:00004511
TGMA:0000007
adult antenna[accessedResource: TGMA:0000007][accessDate: 10-05-2010]
BTO:0000074
One of the paired anterior appendicular organs of the insect head.
adult antenna
One of the paired anterior appendicular organs of the insect head.[accessedResource: TGMA:0000007][accessDate: 10-05-2010]
"feeler"[accessedResource: TGMA:0000007][accessDate: 10-05-2010]
One of a pair of slender movable segmented sensory organs on the head of insects, myriapods, and crustaceans.
One of a pair of slender movable segmented sensory organs on the head of insects, myriapods, and crustaceans.[accessedResource: BTO:0000074][accessDate: 10-05-2010]
antenna
Paired, segmented, jointed, sensory appendage attached to the anterior of the head capsule, between the eyes.[accessedResource: FBbt:00004511][accessDate: 10-05-2010]
Paired, segmented, jointed, sensory appendage attached to the anterior of the head capsule, between the eyes.
MAT:0000086
"feeler"
James Malone
SnomedID:F-04C47
Japanese
ITM
James Malone
Ele Holloway
lymphoma or leukaemia cell line
Amelanotic Melanoma of the Skin
Amelanotic Malignant Melanoma (of Skin)
Amelanotic Malignant Melanoma of the Skin
Amelanotic Malignant Melanoma of the Skin[accessedResource: NCIt:C4633][accessDate: 10-05-2010]
Amelanotic Malignant Melanoma of Skin[accessedResource: NCIt:C4633][accessDate: 10-05-2010]
Amelanotic Melanoma of the Skin[accessedResource: NCIt:C4633][accessDate: 10-05-2010]
Amelanotic Malignant Skin Melanoma
Amelanotic Melanoma of Skin
Amelanotic Melanoma of Skin[accessedResource: NCIt:C4633][accessDate: 10-05-2010]
Amelanotic Malignant Skin Melanoma[accessedResource: NCIt:C4633][accessDate: 10-05-2010]
NCIt:C4633
amelanotic skin melanoma
http://www.ebi.ac.uk/efo/EFO_0001499
InChIKey=PBKZPPIHUVSDNM-LKCFEDHXDC
canrenoate
C22H29O4
[H][C@]12CC[C@@]3(C)[C@@]([H])(CC[C@@]3(O)CCC([O-])=O)[C@]1([H])C=CC1=CC(=O)CC[C@]21C
InChI=1/C22H30O4/c1-20-9-5-15(23)13-14(20)3-4-16-17(20)6-10-21(2)18(16)7-11-22(21,26)12-8-19(24)25/h3-4,13,16-18,26H,5-12H2,1-2H3,(H,24,25)/p-1/t16-,17+,18+,20+,21+,22-/m1/s1/fC22H29O4/q-1
17beta-hydroxy-3-oxo-21a-homopregna-4,6-dien-21a-oate
CHEBI:50159
3-[(8R,9S,10R,13S,14S,17R)-17-hydroxy-10,13-dimethyl-3-oxo-2,3,8,9,10,11,12,13,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]propanoate
A steroid acid anion that has formula C22H29O4.
721 B lymphoblasts
A B cell that is mature, having left the bone marrow. Initially, these cells are IgM-positive and IgD-positive, and they can be activated by antigen.
mature B-lymphocyte
mature B cell
CL:0000785
A B cell that is mature, having left the bone marrow. Initially, these cells are IgM-positive and IgD-positive, and they can be activated by antigen.[accessedResource: CL:0000785][accessDate: 10-05-2010]
mature B-lymphocyte[accessedResource: CL:0000785][accessDate: 10-05-2010]
James Malone
GeneRIF:12152785
malignant peripheral nerve sheath tumor (morphologic abnormality)[accessedResource: DOID:5940][accessDate: 10-05-2010]
Neurogenic sarcoma [obs]
Malignant Peripheral Nerve Sheath Tumour
Nerve Sheath Neoplasms
Malignant Peripheral Nerve Sheath Tumor[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
Malignant Tumor of Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
malignant neoplasm of the peripheral nerve Sheath
Malignant Neurilemoma[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
MPNST - Malignant peripheral nerve sheath tumor[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
malignant peripheral nerve sheath tumor [dup] (morphologic abnormality)
MPNST with mesenchymal differentiation[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
MSH:D018317
Perineuriomas
Melanotic MPNST
Neurosarcoma
Malignant Schwannoma[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
Peripheral Nerve Sheath Tumors[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Malignant peripheral nerve sheath tumor (disorder)
MPNSTs
An uncommon, highly aggressive malignant tumor, arising from the peripheral nerves and affecting mostly adults in their third to sixth decades of life. It usually occurs in medium-sized and large nerves of the buttock, thigh, upper arm, or the paraspinal region. It may be associated with neurofibromatosis 1 (NF1).
MPNST - Malignant peripheral nerve sheath tumour
An uncommon, highly aggressive malignant tumor, arising from the peripheral nerves and affecting mostly adults in their third to sixth decades of life. It usually occurs in medium-sized and large nerves of the buttock, thigh, upper arm, or the paraspinal region. It may be associated with neurofibromatosis 1 (NF1).[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
SNOMEDCT:404037002
Malignant Neurilemmoma[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
MPNST with glandular differentiation
Nerve Sheath Tumors[accessedResource: MSH:D018317][accessDate: 10-05-2010]
true
Peripheral Nerve Sheath Tumors
malignant peripheral nerve sheath tumor (disorder)[accessedResource: DOID:5940][accessDate: 10-05-2010]
Neurogenic sarcoma[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
malignant peripheral nerve sheath tumor [dup] (morphologic abnormality)[accessedResource: DOID:5940][accessDate: 10-05-2010]
Epithelioid MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Malignant Tumor of the Peripheral Nerve Sheath
SNOMEDCT:19897006
Melanotic psammomatous MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Melanotic psammomatous MPNST
Perineurioma[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Neurofibrosarcoma [obs]
GeneRIF:12660952
Neurogenic sarcoma
MPNSTs[accessedResource: MSH:D018317][accessDate: 10-05-2010]
MPNST - Malignant peripheral nerve sheath tumor
Malignant Neoplasm of Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
GeneRIF:14519636
GeneRIF:12730955
Neurosarcoma [obs]
MPNST
DOID:5940
Malignant peripheral nerve sheath tumor (morphologic abnormality)
Malignant Neurilemoma
Neoplasms which arise from nerve sheaths formed by SCHWANN CELLS in the PERIPHERAL NERVOUS SYSTEM or by OLIGODENDROCYTES in the CENTRAL NERVOUS SYSTEM. Malignant peripheral nerve sheath tumors, NEUROFIBROMA, and NEURILEMMOMA are relatively common tumors in this category.
obsolete_malignant peripheral nerve sheath tumor class
Neurofibrosarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
GeneRIF:12917360
Neurofibrosarcoma[accessedResource: SNOMEDCT:404037002][accessDate: 10-05-2010]
Peripheral Nerve Sheath Tumors, Malignant[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Malignant Neurilemmoma
Neurosarcoma[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
MPNST with glandular differentiation[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
NCIt:C3798
Tumors of the Nerve Sheath
Neurofibrosarcoma
Peripheral Nerve Sheath Tumors, Malignant
malignant neoplasm of the peripheral nerve Sheath[accessedResource: DOID:5940][accessDate: 10-05-2010]
Tumors of the Nerve Sheath[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Nerve Sheath Neoplasm
MPNST[accessedResource: MSH:D018317][accessDate: 10-05-2010]
GeneRIF:11642720
Malignant peripheral nerve sheath tumour[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Neoplasms which arise from nerve sheaths formed by SCHWANN CELLS in the PERIPHERAL NERVOUS SYSTEM or by OLIGODENDROCYTES in the CENTRAL NERVOUS SYSTEM. Malignant peripheral nerve sheath tumors, NEUROFIBROMA, and NEURILEMMOMA are relatively common tumors in this category.[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Malignant Peripheral Nerve Sheath Tumor
Neurogenic sarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Malignant Tumor of the Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
Nerve Sheath Tumors
Malignant schwannoma
Malignant Peripheral Nerve Sheath Neoplasm[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
MPNST with mesenchymal differentiation
GeneRIF:12782393
Perineuriomas[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Nerve Sheath Neoplasm[accessedResource: MSH:D018317][accessDate: 10-05-2010]
GeneRIF:14991838
Malignant Tumor of Peripheral Nerve Sheath
Perineurioma
NEOPL NERVE SHEATH[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Nerve Sheath Neoplasms[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Malignant Peripheral Nerve Sheath Neoplasm
Malignant Neoplasm of Peripheral Nerve Sheath
Melanotic MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Neurosarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Epithelioid MPNST
MPNST - Malignant peripheral nerve sheath tumour[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
NEOPL NERVE SHEATH
Whooping cough NOS (disorder)[accessedResource: DOID:1116][accessDate: 10-05-2010]
Whooping cough, unspecified (disorder)[accessedResource: DOID:1116][accessDate: 10-05-2010]
A respiratory system infectious disease that is caused by bacteria of the genus Bordetella characterized by a prolonged, high-pitched, deeply indrawn breath (whoop). The bacterium Bordetella pertussis causes a highly contagious form of whooping cough, and a milder disease is caused by Bordetella parapertussis.
GeneRIF:15845471
Pertussis
bordetella infection[accessedResource: DOID:1116][accessDate: 10-05-2010]
GeneRIF:12464013
Pertussis (disorder)
Infection due to Bordetella pertussis[accessedResource: SNOMEDCT:27836007][accessDate: 10-05-2010]
Pertusses
Whooping cough due to B. pertussis
Pertussis[accessedResource: SNOMEDCT:27836007][accessDate: 10-05-2010]
BORDETELLA PERTUSSIS[accessedResource: ICD9:033.0][accessDate: 10-05-2010]
SNOMEDCT:27836007
DOID:1116
GeneRIF:15341649
WC - Whooping cough
A respiratory infection caused by BORDETELLA PERTUSSIS and characterized by paroxysmal coughing ending in a prolonged crowing intake of breath.
Whooping cough due to B. pertussis[accessedResource: DOID:1116][accessDate: 10-05-2010]
Whooping cough, unspecified (disorder)
Infection due to Bordetella pertussis
MSH:D014917
Whooping cough, NOS
whooping cough
A respiratory system infectious disease that is caused by bacteria of the genus Bordetella characterized by a prolonged, high-pitched, deeply indrawn breath (whoop). The bacterium Bordetella pertussis causes a highly contagious form of whooping cough, and a milder disease is caused by Bordetella parapertussis.[accessedResource: DOID:1116][accessDate: 10-05-2010]
ICD9:033.0
WC - Whooping cough[accessedResource: SNOMEDCT:27836007][accessDate: 10-05-2010]
A respiratory infection caused by BORDETELLA PERTUSSIS and characterized by paroxysmal coughing ending in a prolonged crowing intake of breath.[accessedResource: MSH:D014917][accessDate: 10-05-2010]
Pertusses[accessedResource: MSH:D014917][accessDate: 10-05-2010]
(Whooping cough) or (Bordetella)[accessedResource: DOID:1116][accessDate: 10-05-2010]
bordetella infection
Whooping cough, NOS[accessedResource: SNOMEDCT:27836007][accessDate: 10-05-2010]
GeneRIF:12220988
pertussis
Whooping cough due to unspecified organism[accessedResource: DOID:1116][accessDate: 10-05-2010]
(Whooping cough) or (Bordetella)
Whooping cough due to bordetella pertussis [B. pertussis]
GeneRIF:15716435
GeneRIF:16239529
GeneRIF:12946329
BORDETELLA PERTUSSIS
James Malone
Whooping cough, unspecified organism[accessedResource: DOID:1116][accessDate: 10-05-2010]
Pertussis (disorder)[accessedResource: DOID:1116][accessDate: 10-05-2010]
Whooping cough NOS (disorder)
Whooping cough, unspecified organism
Whooping cough due to bordetella pertussis [B. pertussis][accessedResource: ICD9:033.0][accessDate: 10-05-2010]
Whooping cough due to unspecified organism
DOID:3587
pancreatic ductal adenocarcinoma
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0001611
rock salt
InChIKey=FAPWRFPIFSIZLT-ZKGBBZBBCO
salt
NaCl
table salt
Natriumchlorid
halite
chlorure de sodium
sodium chloride
cloruro sodico
A metal chloride salt with a Na(+) counterion.
ClNa
Kochsalz
CHEBI:26710
An inorganic sodium salt that has formula ClNa.
InChI=1/ClH.Na/h1H;/q;+1/p-1/fCl.Na/h1h;/q-1;m
common salt
natrii chloridum
GeneRIF:15184910
Embryonal rhabdomyosarcoma, pleomorphic[accessedResource: SNOMEDCT:14269005][accessDate: 10-05-2010]
Botryoid sarcoma[accessedResource: SNOMEDCT:14269005][accessDate: 10-05-2010]
James Malone
GeneRIF:12904596
GeneRIF:12865925
Embryonal Rhabdomyosarcomas
SNOMEDCT:404051002
MSH:D018233
Botryoid sarcoma
embryonal rhabdomyosarcoma
GeneRIF:15024701
NCIt:C8971
GeneRIF:15475955
DOID:3246
Embryonal rhabdomyosarcoma, pleomorphic
SNOMEDCT:14269005
Embryonal rhabdomyosarcoma (morphologic abnormality)
A poorly circumscribed morphologic variant of rhabdomyosarcoma. It is characterized by the presence of primitive skeletal muscle differentiation in any stage of myogenesis. There are three histologic types, spindle cell, botryoid and anaplastic.[accessedResource: NCIt:C8971][accessDate: 10-05-2010]
Embryonal rhabdomyosarcoma (morphologic abnormality)[accessedResource: DOID:3246][accessDate: 10-05-2010]
Sarcoma botryoides
A form of RHABDOMYOSARCOMA arising primarily in the head and neck, especially the orbit, of children below the age of 10. The cells are smaller than those of other rhabdomyosarcomas and are of two basic cell types: spindle cells and round cells. This cancer is highly sensitive to chemotherapy and has a high cure rate with multi-modality therapy. (From Holland et al., Cancer Medicine, 3d ed, p2188)[accessedResource: MSH:D018233][accessDate: 10-05-2010]
Sarcoma botryoides[accessedResource: SNOMEDCT:14269005][accessDate: 10-05-2010]
GeneRIF:11846302
Embryonal rhabdomyosarcoma (disorder)
Rhabdomyosarcomas, Embryonal[accessedResource: MSH:D018233][accessDate: 10-05-2010]
A form of RHABDOMYOSARCOMA arising primarily in the head and neck, especially the orbit, of children below the age of 10. The cells are smaller than those of other rhabdomyosarcomas and are of two basic cell types: spindle cells and round cells. This cancer is highly sensitive to chemotherapy and has a high cure rate with multi-modality therapy. (From Holland et al., Cancer Medicine, 3d ed, p2188)
A poorly circumscribed morphologic variant of rhabdomyosarcoma. It is characterized by the presence of primitive skeletal muscle differentiation in any stage of myogenesis. There are three histologic types, spindle cell, botryoid and anaplastic.
Embryonal rhabdomyosarcoma (disorder)[accessedResource: DOID:3246][accessDate: 10-05-2010]
Ele Holloway
Natural Language Generator 8th April 2010
James Malone
CM7-1
A CM7-1 is a cell line.
A CM7-1 is both something that derives from a mus musculus, and something that derives from an embryonic stem cell.
PC-9
James Malone
Ele Holloway
cis-Delta(5,8,11,14)-eicosatetraenoic acid
arachidonic acid
An icosa-5,8,11,14-tetraenoic acid that has formula C20H32O2.
(5Z,8Z,11Z,14Z)-Icosatetraenoic acid
(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoic acid
InChI=1/C20H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20(21)22/h6-7,9-10,12-13,15-16H,2-5,8,11,14,17-19H2,1H3,(H,21,22)/b7-6-,10-9-,13-12-,16-15-/f/h21H
Arachidonsaeure
cis-5,8,11,14-Eicosatetraenoic acid
C20H32O2
all-cis-5,8,11,14-eicosatetraenoic acid
InChIKey=YZXBAPSDXZZRGB-FSPJQBAYDG
CCCCC\\C=C/C\\C=C/C\\C=C/C\\C=C/CCCC(O)=O
CHEBI:15843
http://www.ebi.ac.uk/efo/EFO_0001489
Increased pressure within the pulmonary circulation due to lung or heart disorder.
James Malone
obsolete_pulmonary arterial hypertension
Increased pressure within the pulmonary circulation due to lung or heart disorder.[accessedResource: NCIt:C3120][accessDate: 10-05-2010]
duplicate of pulmonary hypertension EFO_0001361
true
1.8
Pulmonary Hypertension
NCIt:C3120
true
The time period elapsed since an identifiable point in the life cycle of an organism. If a developmental stage is specified, the identifiable point would be the beginning of that stage.
obsolete_clinical history age
ArrayExpress production team
An assay in which the methylation state is determined and is compared between samples.
methylation profiling
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158851&type=germplasm
CS57827 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158851&type=germplasm
CS57827
James Malone
peripheral T-cell or NK-cell neoplasm
neoplasm of mature T-cells or NK-cells
Tomasz Adamusiak
James Malone
James Malone
COLO 829
COLO-829
Ele Holloway
COLO829
NCIt:C14138
aggressive
Tomasz Adamusiak
Jie Zheng
B Cells
CL:0000236
Bursa-Dependent Lymphocytes[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B Cells[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B-Lymphocytes[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
Bursa-Dependent Lymphocytes
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
Consolidated with B cell (EFO_0000101), use B cell class instead.
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.
B Lymphocytes
B-Cell
obsolete_B lymphocyte
true
Bursa-Equivalent Lymphocyte
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.[accessedResource: CL:0000236][accessDate: 10-05-2010]
Bursa-Equivalent Lymphocyte[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B lymphocyte[accessedResource: CL:0000236][accessDate: 10-05-2010]
B lymphocyte
B cell[accessedResource: CL:0000236][accessDate: 10-05-2010]
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.
NCIt:C12474
MO_714
http://www.ebi.ac.uk/efo/EFO_0002018
A homogenizer is an instrument for the homogenization of various types of material, such as tissue, plant, food, soil, and many others.
homogenizer
James Malone
GM12044
James Malone
A GM19238 is a cell line.
A GM19238 is all of the following: something that has as quality a female, something that derives from a Homo sapiens, and something that derives from a b cell.
GM19238
Natural Language Generator 8th April 2010
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158715&type=germplasm
CS57691 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158715&type=germplasm
CS57691
James Malone
CCFSTTG1
James Malone
Ele Holloway
MA:0001068
superior colliculus
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158644&type=germplasm
CS57620 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158644&type=germplasm
CS57620
James Malone
Kin-S49
James Malone
HCC1008
James Malone
Ele Holloway
YPAC
James Malone
Ele Holloway
etanercept
ENBREL
MO_447
genetic modification design
Tomasz Adamusiak
FMA:54510
Ele Holloway
Oculomotor nuclear complex
Nucleus of oculomotor nerve[accessedResource: FMA:54510][accessDate: 10-05-2010]
James Malone
Third cranial nerve nucleus[accessedResource: FMA:54510][accessDate: 10-05-2010]
Nucleus of oculomotor nerve
Oculomotor nuclear complex[accessedResource: FMA:54510][accessDate: 10-05-2010]
Nucleus of third cranial nerve[accessedResource: FMA:54510][accessDate: 10-05-2010]
Nucleus of third cranial nerve
EV:0100250
Third cranial nerve nucleus
oculomotor nucleus
FMAID:7394
windpipe[accessedResource: BTO:0001388][accessDate: 10-05-2010]
MAT:0000137
James Malone
tracheal tubule[accessedResource: BTO:0001388][accessDate: 10-05-2010]
1: The cartilaginous and membranous tube descending from the larynx and branching into the right and left main bronchi. It is kept patent by a series of about twenty transverse horseshoe-shaped cartilages. Called also windpipe. n2: One of a system of minute tubes ramifying throughout the body of a terrestrial arthropod and delivering air to the tissues. Called also tracheal tubule.[accessedResource: BTO:0001388][accessDate: 10-05-2010]
MA:0000441
TADS:000315
SAEL:111
trachea
windpipe
XAO:0000118
EHDAA:3078
1: The cartilaginous and membranous tube descending from the larynx and branching into the right and left main bronchi. It is kept patent by a series of about twenty transverse horseshoe-shaped cartilages. Called also windpipe. n2: One of a system of minute tubes ramifying throughout the body of a terrestrial arthropod and delivering air to the tissues. Called also tracheal tubule.
EMAPA:16853
FBbt:00005043
EV:0100040
BTO:0001388
tracheal tubule
second
A time unit which is equal to the duration of 9 192 631 770 periods of the radiation corresponding to the transition between the two hyperfine levels of the ground state of the caesium 133 atom.
true
s
UO:0000010
James Malone
A second is a time unit which is equal to the duration of 9 192 631 770 periods of the radiation corresponding to the transition between the two hyperfine levels of the ground state of the caesium 133 atom.
http://www.ebi.ac.uk/efo/EFO_0001687
Occipital lobe is the one of five lobes of the cerebral hemisphere which occupies the posterior-most portion of the hemisphere. Anteriorly, it shares an arbitrary border with the parietal lobe and temporal lobe. Medially, it is bounded by the longitudinal cerebral fissure.[accessedResource: FMAID:67325][accessDate: 10-05-2010]
occipital lobe
Occipital lobe is the one of five lobes of the cerebral hemisphere which occupies the posterior-most portion of the hemisphere. Anteriorly, it shares an arbitrary border with the parietal lobe and temporal lobe. Medially, it is bounded by the longitudinal cerebral fissure.
This lobe is located at the back of the head and is involved in vision and reading.
EV:0100170
occipital cortex
BTO:0000293
James Malone
Occipital region
This lobe is located at the back of the head and is involved in vision and reading.[accessedResource: BTO:0000293][accessDate: 10-05-2010]
MAT:0000507
Occipital region[accessedResource: FMAID:67325][accessDate: 10-05-2010]
FMAID:67325
occipital cortex[accessedResource: BTO:0000293][accessDate: 10-05-2010]
MA:0000309
FMA:9914
Irregular bone that articulates with other vertebrae, or with one other vertebra and the skull or the sacrum
Irregular bone that articulates with other vertebrae, or with one other vertebra and the skull or the sacrum[accessedResource: FMA:9914][accessDate: 10-05-2010]
vertebra
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158871&type=germplasm
CS57847 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158871&type=germplasm
CS57847
James Malone
Seminiferous Tubule[accessedResource: NCIt:C13047][accessDate: 10-05-2010]
BTO:0001235
NCIt:C13047
One of two or three twisted, curved tubules in each lobule of the testis in which spermatozoa develop.
One of two or three twisted, curved tubules in each lobule of the testis in which spermatozoa develop.[accessedResource: BTO:0001235][accessDate: 10-05-2010]
James Malone
seminiferous tubules
Seminiferous Tubule
FBbt:00001433
Any ganglion mother cell (FBbt:00005149) that is part of some embryo (FBbt:00000052).
Any ganglion mother cell (FBbt:00005149) that is part of some embryo (FBbt:00000052).[accessedResource: FBbt:00001433][accessDate: 10-05-2010]
embryonic ganglion mother cell
James Malone
MO_519
operator variation design
Tomasz Adamusiak
A shoot component is a plant component which is specifically part of a plant shoot.
shoot component
CardMes
James Malone
cardiogenic mesoderm
CardMes[accessedResource: FBbt:00005541][accessDate: 10-05-2010]
P2 CardMes
cardiac mesoderm primordium
FBbt:00005541
cardiac mesoderm
cardiac mesoderm[accessedResource: FBbt:00005541][accessDate: 10-05-2010]
P2 CardMes[accessedResource: FBbt:00005541][accessDate: 10-05-2010]
cardiogenic mesoderm[accessedResource: FBbt:00005541][accessDate: 10-05-2010]
R11
James Malone
Ele Holloway
A leaf component is a plant component which is part of a leaf.
leaf component
James Malone
cancer cell line
Natural Language Generator 8th April 2010
James Malone
A cancer cell line is defined as something that is bearer of a cancer.
A cancer cell line is a cell line.
duplication: use EFO_0000945
MA:0000688
limb skeleton[accessedResource: MAT:0000151][accessDate: 10-05-2010]
limb bone[accessedResource: MAT:0000151][accessDate: 10-05-2010]
limb skeleton
obsolete_limb bone
MAT:0000151
James Malone
limb bone
true
1.4
http://www.arabidopsis.org/servlets/TairObject?id=1005158874&type=germplasm
CS57850 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158874&type=germplasm
CS57850
James Malone
antipsychotic drugs
major tranquilizing agents
neuroleptic
neuroleptiques
http://www.ebi.ac.uk/efo/EFO_0001486
antipsychotic drug
Tomasz Adamusiak
Neuroleptikum
neuroleptic agents
major tranquilizers
antipsychotics
antipsychotiques
NIFSTD:nlx_chem_20090603
Antipsychotic drugs are agents that control agitated psychotic behaviour, alleviate acute psychotic states, reduce psychotic symptoms, and exert a quieting effect.
antipsychotic
antipsychotic[accessedResource: NIFSTD:nlx_chem_20090603][accessDate: 10-05-2010]
neuroleptics
grosser Tranquilizer
antipsychotic agents
neuroleptique
acute monocytic leukemia, FAB M5 (disorder)
Leukemia, Acute Monocytic
acute monocytic leukemia, FAB M5 (disorder)[accessedResource: DOID:8864][accessDate: 10-05-2010]
GeneRIF:12547160
acute Monoblastic Leukemia and acute Monocytic Leukemia
Myeloid Leukemia, Schilling Type
Leukemias, Acute Monocytic[accessedResource: MSH:D007948][accessDate: 10-05-2010]
acute monoblastic leukemia (disorder)[accessedResource: DOID:8864][accessDate: 10-05-2010]
GeneRIF:15145445
Myeloid Leukemia, Acute, M5
acute monocytic leukemia, morphology (morphologic abnormality)
acute Monoblastic Leukemia and acute Monocytic Leukemia[accessedResource: DOID:8864][accessDate: 10-05-2010]
Leukemias, Acute Monoblastic
acute monoblastic leukemia (disorder)
Acute Monoblastic Leukemias[accessedResource: MSH:D007948][accessDate: 10-05-2010]
Leukemias, Acute Monocytic
acute monocytic leukemia without mention of remission
Myeloid Leukemia, Acute, M5[accessedResource: MSH:D007948][accessDate: 10-05-2010]
acute monocytic leukaemia[accessedResource: DOID:8864][accessDate: 10-05-2010]
acute monocytic leukemia, morphology (morphologic abnormality)[accessedResource: DOID:8864][accessDate: 10-05-2010]
acute monoblastic leukemia
acute monocytic leukemia without mention of remission[accessedResource: DOID:8864][accessDate: 10-05-2010]
Acute Monocytic Leukemia[accessedResource: MSH:D007948][accessDate: 10-05-2010]
Myeloid Leukemia, Schilling-Type[accessedResource: MSH:D007948][accessDate: 10-05-2010]
James Malone
MYELOID LEUKEMIA ACUTE M 05[accessedResource: MSH:D007948][accessDate: 10-05-2010]
acute monocytic leukaemia
ICD9:206.0
An acute myeloid leukemia in which 80% or more of the leukemic cells are of monocytic lineage including monoblasts, promonocytes, and MONOCYTES.
An acute myeloid leukemia in which 80% or more of the leukemic cells are of monocytic lineage including monoblasts, promonocytes, and MONOCYTES.[accessedResource: MSH:D007948][accessDate: 10-05-2010]
MSH:D007948
DOID:8864
LEUKEMIA MYELOID ACUTE M 05
The vascular organ in mammals except monotremes and marsupials that unites the fetus to the maternal uterus and mediates its metabolic exchanges through a more or less intimate association of uterine mucosal with chorionic and usually allantoic tissues; also: an analogous organ in another animal.[accessedResource: BTO:0001078][accessDate: 10-05-2010]
placenta
MAT:0000279
BTO:0001078
The vascular organ in mammals except monotremes and marsupials that unites the fetus to the maternal uterus and mediates its metabolic exchanges through a more or less intimate association of uterine mucosal with chorionic and usually allantoic tissues; also: an analogous organ in another animal.
EVM:2000256
EV:3000466
James Malone
SAEL:84
EV:0100119
MA:0000386
FMAID:63934
http://www.arabidopsis.org/servlets/TairObject?id=1005158605&type=germplasm
CS57581 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158605&type=germplasm
CS57581
James Malone
https://www.cbil.upenn.edu/RADQuerier/php/displayStudy.php?study_id=2424
Tomasz Adamusiak
Jie Zheng
C57Bl/10 derived nonobese diabetic (NOD) mouse strain.
NOD.B10
BTO:0000052
stomatal complex
James Malone
MAT:0000346
PO:0002000
GRO:0005350
The epidermal complex consisting of two guard cells and the pore between them.
The epidermal complex consisting of two guard cells and the pore between them.[accessedResource: BTO:0000052][accessDate: 10-05-2010]
GRO:0005350[accessedResource: BTO:0000052][accessDate: 10-05-2010]
stoma
stoma[accessedResource: BTO:0000052][accessDate: 10-05-2010]
http://www.ebi.ac.uk/efo/EFO_0001861
CHEBI:37848
plant growth hormone
James Malone
MAT:0000493
ventral striatum
Ventral is a geometric modifier describing parts pertaining to the front or anterior of any structure, for example ventral striatum.
ventral
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158604&type=germplasm
CS57580 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158604&type=germplasm
CS57580
James Malone
Olive Baboon
http://www.ebi.ac.uk/efo/EFO_0002652
Papio anubis
James Malone
Sporadic amyotrophic lateral sclerosis is a amyotrophic lateral sclerosis in which there is no known cause, such as no family history.
sporadic amyotrophic lateral sclerosis
James Malone
MO_555
compound treatment design
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158661&type=germplasm
CS57637 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158661&type=germplasm
CS57637
James Malone
TAO:0000471
cardiac atrium[accessedResource: BTO:0000903][accessDate: 10-05-2010]
The paired upper chambers of the heart. The left atrium receives oxygenated blood from the pulmonary vein and pumps blood into the left ventricle. The right atrium receives venous deoxygenated blood from the entire body via the superior and inferior vena cavae and pumps blood into the right ventricle.
FBbt:00005615
mouth cavity
mouth cavity[accessedResource: FBbt:00005615][accessDate: 10-05-2010]
MAT:0000496
BTO:0000903
General anatomical term which refers to a chamber or cavity to which are connected one or more chambers or passageways. Examples: right atrium of heart, atrium of middle nasal meatus, atrium of tympanic cavity, atrium of alveolus.[accessedResource: FMAID:85574][accessDate: 10-05-2010]
James Malone
MA:0000073
atrial tissue[accessedResource: BTO:0000903][accessDate: 10-05-2010]
In the heart, the atrium is an upper chamber found on both sides of the heart. The left atrium receives red, oxygenated blood from the lungs by way of the pulmonary veins. The right atrium receives dark red blood from the other parts of the body.[accessedResource: BTO:0000903][accessDate: 10-05-2010]
atrial tissue
EMAPA:16688
In the heart, the atrium is an upper chamber found on both sides of the heart. The left atrium receives red, oxygenated blood from the lungs by way of the pulmonary veins. The right atrium receives dark red blood from the other parts of the body.
atrium
General anatomical term which refers to a chamber or cavity to which are connected one or more chambers or passageways. Examples: right atrium of heart, atrium of middle nasal meatus, atrium of tympanic cavity, atrium of alveolus.
ZFA0000471
EHDAA:1265
One of four heart chambers.
FMAID:85574
MFO:0080900
EV:0100018
cardiac atrium
One of four heart chambers.[accessedResource: TAO:0000471][accessDate: 10-05-2010]
CL:0000542
obsolete_T lymphocyte
A cell of the B cell, T cell, or natural killer cell lineage.
T lymphoma cell
James Malone
1.7
Duplicate: use EFO_0000208
A cell of the B cell, T cell, or natural killer cell lineage.[accessedResource: CL:0000542][accessDate: 10-05-2010]
true
Tomasz Adamusiak
Sprague Dawley
RGD:70508
James Malone
Sprague-Dawley rat
NIFSTD:birnlex_266
Sprague-Dawley rat[accessedResource: NIFSTD:birnlex_266][accessDate: 10-05-2010]
NIFSTD:birnlex_214
Rats, Sprague Dawley
Rats, Sprague Dawley[accessedResource: NIFSTD:birnlex_266][accessDate: 10-05-2010]
Stanolone
androstanolone
[H][C@@]12CC[C@@]3([H])[C@]4([H])CC[C@H](O)[C@@]4(C)CC[C@]3([H])[C@@]1(C)CCC(=O)C2
CHEBI:16330
Dihydrotestosteron
androstanolonum
James Malone
dihydrotestoterone
InChI=1/C19H30O2/c1-18-9-7-13(20)11-12(18)3-4-14-15-5-6-17(21)19(15,2)10-8-16(14)18/h12,14-17,21H,3-11H2,1-2H3/t12-,14-,15-,16-,17-,18-,19-/m0/s1
androstanolona
5alpha-Dihydrotestosterone
An androgen that has formula C19H30O2.
InChIKey=NVKAWKQGWWIWPM-ABEVXSGRBZ
http://www.ebi.ac.uk/efo/EFO_0002007
17beta-hydroxy-5alpha-androstan-3-one
C19H30O2
DIHYDROTESTOSTERONE
17beta-hydroxyandrostan-3-one
FMA:10635
external carotid artery
James Malone
MAT:0000351
gall tissue
James Malone
1.8
true
obsolete_strain factor
James Malone
consolodated all strains into organism hierarchy
Tomasz Adamusiak
NIFSTD:sao196989303
PATO:0000918
NIFSTD:birnlex_2391
A volume is a size quality which describes the amount of 3-dimensional space an object occupies.
A 3-D extent quality inhering in a bearer by virtue of the bearer's amount of 3-dimensional space it occupies.
volume
James Malone
A 3-D extent quality inhering in a bearer by virtue of the bearer's amount of 3-dimensional space it occupies.[accessedResource: PATO:0000918][accessDate: 10-05-2010]
A Lbeta T2 is a cell line.
A Lbeta T2 is both something that derives from a mus musculus, and something that derives from a pituitary.
MCC:0000292
LbetaT2
Ele Holloway
James Malone
Natural Language Generator 8th April 2010
CL:0000171
alpha cell
pancreatic alpha cell[accessedResource: CL:0000171][accessDate: 10-05-2010]
Jie Zheng
pancreatic A cell[accessedResource: CL:0000171][accessDate: 10-05-2010]
pancreatic alpha cell
Tomasz Adamusiak
pancreatic A cell
NCIH1650
James Malone
Ele Holloway
James Malone
EMAPA:17174
pericardial sac[accessedResource: ZFA:0000054][accessDate: 10-05-2010]
BTO:0000717
1: The conical sac of serous membrane that encloses the heart and the roots of the great blood vessels of vertebrates.n2: A cavity or space that contains the heart of an invertebrate and in arthropods is a part of the hemocoel.[accessedResource: BTO:0000717][accessDate: 10-05-2010]
pericardial sac
Organ cluster which has as its parts the fibrous pericardium and the pericardial sac.
ZFA:0000054
EV:0100023
FMAID:9869
EHDAA:5376
MAT:0000454
pericardium
Organ cluster which has as its parts the fibrous pericardium and the pericardial sac.[accessedResource: FMAID:9869][accessDate: 10-05-2010]
1: The conical sac of serous membrane that encloses the heart and the roots of the great blood vessels of vertebrates.n2: A cavity or space that contains the heart of an invertebrate and in arthropods is a part of the hemocoel.
JAX:004460
BDC2.5/NOD is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/004460.html
A mouse strain developed by selection for diabetes (high fasting blood glucose) from F6 of the CTS strain
BDC2.5/NOD
Tomasz Adamusiak
Jie Zheng
James Malone
SW837
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0001448
Bacteria
James Malone
AB140H is an Ara-C-resistant murine leukemia.
B140H
Natural Language Generator 8th April 2010
James Malone
Ele Holloway
Tuberculosis of other organs NOS (disorder)
Tuberculosis of other specified organs (disorder)
Tuberculosis of other specified organs, bacteriological or histological examination not done
GeneRIF:16267303
GeneRIF:15322009
GeneRIF:15774900
ICD9:017.94
GeneRIF:12296850
GeneRIF:11907104
GeneRIF:15860225
GeneRIF:14979495
GeneRIF:14568951
GeneRIF:15882420
Tuberculoma (finding)[accessedResource: DOID:399][accessDate: 10-05-2010]
SNOMEDCT:186271001
TB OF ORGAN NEC-UNSPEC[accessedResource: ICD9:017.90][accessDate: 10-05-2010]
TB - Tuberculosis
GeneRIF:12077261
GeneRIF:12075004
Tuberculosis of other specified organs, tubercle bacilli not found by bacteriological examination, but tuberculosis confirmed histologically
ICD9:017.95
GeneRIF:15061663
GeneRIF:12714269
TB OF ORGAN NEC-CULT DX
ICD9:010-018.99
GeneRIF:12244136
Tuberculosis of other organs[accessedResource: SNOMEDCT:186247008][accessDate: 10-05-2010]
Mycobacterium tuberculosis infection[accessedResource: SNOMEDCT:56717001][accessDate: 10-05-2010]
Tuberculous[accessedResource: SNOMEDCT:371569005][accessDate: 10-05-2010]
GeneRIF:14500465
Tuberculosis of other specified organs NOS (disorder)
GeneRIF:15649891
Tuberculosis of other specified organs
tuberculous abscess
[X]Tuberculosis of other specified organs (disorder)[accessedResource: SNOMEDCT:187292005][accessDate: 10-05-2010]
Tuberculosis of other specified organs, tubercle bacilli not found (in sputum) by microscopy, but found by bacterial culture[accessedResource: ICD9:017.94][accessDate: 10-05-2010]
GeneRIF:15500449
Tuberculosis of other specified organs NOS (disorder)[accessedResource: SNOMEDCT:186274009][accessDate: 10-05-2010]
tuberculous abscess[accessedResource: DOID:399][accessDate: 10-05-2010]
GeneRIF:16224188
Tuberculosis of other specified organs, bacteriological or histological examination unknown (at present)[accessedResource: ICD9:017.92][accessDate: 10-05-2010]
GeneRIF:12942785
SNOMEDCT:56717001
DOID:399
Tuberculosis, antepartum[accessedResource: DOID:399][accessDate: 10-05-2010]
Tuberculosis NOS (disorder)
Tuberculosis pregnancy
Tuberculosis of other organs (disorder)
Infection due to Mycobacterium tuberculosis (disorder)
Tuberculosis, antepartum
ICD9:017.90
Tuberculosis NOS (disorder)[accessedResource: SNOMEDCT:186282009][accessDate: 10-05-2010]
Tuberculosis of other specified organs, bacteriological or histological examination unknown (at present)
TB OF ORGAN NEC-NO EXAM
GeneRIF:15187146
Tuberculosis of other specified organs, unspecified examination[accessedResource: ICD9:017.90][accessDate: 10-05-2010]
tuberculoma
Infection due to Mycobacterium tuberculosis[accessedResource: SNOMEDCT:56717001][accessDate: 10-05-2010]
Tuberculosis of other specified organs, tubercle bacilli not found by bacteriological or histological examination, but tuberculosis confirmed by other methods [inoculation of animals][accessedResource: ICD9:017.96][accessDate: 10-05-2010]
[X]Tuberculosis of other specified organs (disorder)
Tuberculosis of other organs NOS (disorder)[accessedResource: SNOMEDCT:186275005][accessDate: 10-05-2010]
Tuberculosis of other specified organs (disorder)[accessedResource: SNOMEDCT:186271001][accessDate: 10-05-2010]
GeneRIF:11791667
GeneRIF:15599404
ICD9:017.91
Tuberculous (qualifier value)
GeneRIF:12751024
Tuberculosis of other specified organs NOS[accessedResource: SNOMEDCT:186274009][accessDate: 10-05-2010]
GeneRIF:12531774
GeneRIF:12646604
GeneRIF:12934195
GeneRIF:12753505
SNOMEDCT:186275005
GeneRIF:15478069
GeneRIF:15680239
Tuberculosis pregnancy[accessedResource: DOID:399][accessDate: 10-05-2010]
SNOMEDCT:371569005
GeneRIF:12516771
Tuberculosis of other organs NOS
A chronic, recurrent infection caused by the bacterium Mycobacterium tuberculosis. Tuberculosis (TB) may affect almost any tissue or organ of the body with the lungs being the most common site of infection. The clinical stages of TB are primary or initial infection, latent or dormant infection, and recrudescent or adult-type TB. Ninety to 95% of primary TB infections may go unrecognized. Histopathologically, tissue lesions consist of granulomas which usually undergo central caseation necrosis. Local symptoms of TB vary according to the part affected; acute symptoms include hectic fever, sweats, and emaciation; serious complications include granulomatous erosion of pulmonary bronchi associated with hemoptysis. If untreated, progressive TB may be associated with a high degree of mortality. This infection is frequently observed in immunocompromised individuals with AIDS or a history of illicit IV drug use. --2004[accessedResource: NCIt:C3423][accessDate: 10-05-2010]
GeneRIF:12195379
NCIt:C3423
TB OF ORGAN NEC-HISTO DX
MTB - Mycobacterium tuberculosis infection
GeneRIF:12496428
[X]Tuberculosis of other specified organs[accessedResource: SNOMEDCT:187292005][accessDate: 10-05-2010]
Mycobacterium tuberculosis infection
GeneRIF:11801672
Tuberculous (qualifier value)[accessedResource: SNOMEDCT:371569005][accessDate: 10-05-2010]
GeneRIF:16077122
GeneRIF:15686559
ICD9:017.96
Tuberculous
GeneRIF:12391840
Tuberculoma (finding)
GeneRIF:12117995
GeneRIF:14551880
Tuberculosis of other organs
GeneRIF:15993364
Tuberculosis of other specified organs, tubercle bacilli not found (in sputum) by microscopy, but found by bacterial culture
GeneRIF:12596048
GeneRIF:15804490
GeneRIF:12218133
Tuberculosis of other specified organs, tubercle bacilli not found by bacteriological or histological examination, but tuberculosis confirmed by other methods [inoculation of animals]
Tuberculosis of mother, with delivery[accessedResource: DOID:399][accessDate: 10-05-2010]
ICD9:017.92
TB[accessedResource: NCIt:C3423][accessDate: 10-05-2010]
SNOMEDCT:186274009
TB ORGAN NEC-EXAM UNKN[accessedResource: ICD9:017.92][accessDate: 10-05-2010]
Tuberculosis (disorder)[accessedResource: SNOMEDCT:56717001][accessDate: 10-05-2010]
GeneRIF:12391841
GeneRIF:15879136
GeneRIF:15295696
Tuberculosis of other organs NOS[accessedResource: SNOMEDCT:186275005][accessDate: 10-05-2010]
GeneRIF:16136464
ICD9:017.93
TB ORGAN NEC-EXAM UNKN
SNOMEDCT:187292005
GeneRIF:16002675
Tuberculosis of other specified organs, bacteriological or histological examination not done[accessedResource: ICD9:017.91][accessDate: 10-05-2010]
Tuberculosis of other specified organs NOS
Tuberculosis of other specified organs, unspecified examination
Tuberculosis (disorder)
Tuberculosis of other specified organs, tubercle bacilli not found by bacteriological examination, but tuberculosis confirmed histologically[accessedResource: ICD9:017.95][accessDate: 10-05-2010]
GeneRIF:15879133
TB
GeneRIF:16177361
TB OF ORGAN NEC-OTH TEST
Infection due to Mycobacterium tuberculosis
TB OF ORGAN NEC-OTH TEST[accessedResource: ICD9:017.96][accessDate: 10-05-2010]
GeneRIF:16103355
Tuberculosis of other specified organs, tubercle bacilli found (in sputum) by microscopy
GeneRIF:15863395
SNOMEDCT:373576009
Tuberculosis of mother, with delivery
GeneRIF:15498158
SNOMEDCT:186282009
TB OF ORGAN NEC-UNSPEC
GeneRIF:12368450
Infection due to Mycobacterium tuberculosis (disorder)[accessedResource: SNOMEDCT:373576009][accessDate: 10-05-2010]
GeneRIF:12234259
GeneRIF:15050961
ICD9:017
Tuberculosis, postpartum
Tuberculosis NOS[accessedResource: SNOMEDCT:186282009][accessDate: 10-05-2010]
GeneRIF:15138193
ICD9:017.9
GeneRIF:15866927
GeneRIF:15385470
TB OF ORGAN NEC-HISTO DX[accessedResource: ICD9:017.95][accessDate: 10-05-2010]
TB OF ORGAN NEC-NO EXAM[accessedResource: ICD9:017.91][accessDate: 10-05-2010]
TB OF ORGAN NEC-CULT DX[accessedResource: ICD9:017.94][accessDate: 10-05-2010]
tuberculosis
James Malone
Tuberculosis NOS
tuberculoma[accessedResource: DOID:399][accessDate: 10-05-2010]
Tuberculosis of other specified organs, tubercle bacilli found (in sputum) by microscopy[accessedResource: ICD9:017.93][accessDate: 10-05-2010]
A chronic, recurrent infection caused by the bacterium Mycobacterium tuberculosis. Tuberculosis (TB) may affect almost any tissue or organ of the body with the lungs being the most common site of infection. The clinical stages of TB are primary or initial infection, latent or dormant infection, and recrudescent or adult-type TB. Ninety to 95% of primary TB infections may go unrecognized. Histopathologically, tissue lesions consist of granulomas which usually undergo central caseation necrosis. Local symptoms of TB vary according to the part affected; acute symptoms include hectic fever, sweats, and emaciation; serious complications include granulomatous erosion of pulmonary bronchi associated with hemoptysis. If untreated, progressive TB may be associated with a high degree of mortality. This infection is frequently observed in immunocompromised individuals with AIDS or a history of illicit IV drug use. --2004
MTB - Mycobacterium tuberculosis infection[accessedResource: SNOMEDCT:56717001][accessDate: 10-05-2010]
Tuberculosis, postpartum[accessedResource: DOID:399][accessDate: 10-05-2010]
Tuberculosis of other specified organs[accessedResource: SNOMEDCT:186271001][accessDate: 10-05-2010]
[X]Tuberculosis of other specified organs
GeneRIF:12960337
GeneRIF:15039368
SNOMEDCT:186247008
GeneRIF:12825894
GeneRIF:15695641
TB OF ORGAN NEC-MICRO DX[accessedResource: ICD9:017.93][accessDate: 10-05-2010]
Tuberculosis of other organs (disorder)[accessedResource: SNOMEDCT:186247008][accessDate: 10-05-2010]
TB OF ORGAN NEC-MICRO DX
TB - Tuberculosis[accessedResource: SNOMEDCT:56717001][accessDate: 10-05-2010]
GeneRIF:12068984
true
NIFSTD:birnlex_2117
obsolete_experiment
Tomasz Adamusiak
Bowel
The tubular part of the alimentary canal that extends from the stomach to the anus.[accessedResource: BTO:0000648][accessDate: 10-05-2010]
intestines[accessedResource: MAT:0000043][accessDate: 10-05-2010]
MAT:0000043
The tubular part of the alimentary canal that extends from the stomach to the anus.
James Malone
Bowel[accessedResource: FMAID:7199][accessDate: 10-05-2010]
FMAID:7199
EHDAA:518
intestines
WBbt:0005772
intestine
gut[accessedResource: MAT:0000043][accessDate: 10-05-2010]
MFO:0003040
The fluid-feeding habit of adult mosquitoes is reflected in the structure and ultrastructure of the alimentary canal.[accessedResource: TGMA:0001819][accessDate: 10-05-2010]
adult alimentary canal
XAO:0000129
adult alimentary canal[accessedResource: MAT:0000043][accessDate: 10-05-2010]
BTO:0000648
MA:0000328
gut
TADS:0000165
TGMA:0001819
EV:0100071
TAO:0001338
ZFA:0001338
AAO:0000246
SAEL:55
The fluid-feeding habit of adult mosquitoes is reflected in the structure and ultrastructure of the alimentary canal.
XAO:0000238
MAT:0000050
SAEL:88
EMAPA:17896
James Malone
The bladder-like rectum is bounded by a layer of circular muscle fibres and by sparser longitudinal fibres.
TGMA:0001028
rectal sac[accessedResource: MAT:0000050][accessDate: 10-05-2010]
FBbt:00005756
MA:0000336
BTO:0001158
The terminal part of the intestine from the sigmoid flexure to the anus.[accessedResource: BTO:0001158][accessDate: 10-05-2010]
TADS:0000166
WBbt:0005773
The terminal part of the intestine from the sigmoid flexure to the anus.
rectum
EV:0100081
The bladder-like rectum is bounded by a layer of circular muscle fibres and by sparser longitudinal fibres.[accessedResource: TGMA:0001028][accessDate: 10-05-2010]
intestinum rectum[accessedResource: BTO:0001158][accessDate: 10-05-2010]
rectal sac
EHDAA:EHDAA\:5836
intestinum rectum
FMAID:14544
http://jaxmice.jax.org/strain/009264.html
ILSXISS22/TejJ
Tomasz Adamusiak
3rd instar larva
C6H6O
carbolic acid
Phenic acid
Ele Holloway
James Malone
InChI=1/C6H6O/c7-6-4-2-1-3-5-6/h1-5,7H
PhOH
acide carbolique
Hydroxybenzene
acide phenique
CHEBI:15882
Phenylic acid
A phenol that has formula C6H6O.
http://www.ebi.ac.uk/efo/EFO_0002417
Oc1ccccc1
Karbolsaeure
Benzenol
phenol
InChIKey=ISWSIDIOOBJBQZ-UHFFFAOYAI
Carbolsaeure
FBbt:00005748
embryonic anal pad
James Malone
FBbt:00005556
apoptotic amnioserosa
James Malone
James Malone
ZEA:0015175
MAT:0000004
PO:0009004
The individual or generation of a plant exhibiting alternation of generations that bears sex organs.
The individual or generation of a plant exhibiting alternation of generations that bears sex organs.[accessedResource: BTO:0000495][accessDate: 10-05-2010]
gametophyte
BTO:0000495
2-(ACETYLOXY)BENZOIC ACID
salicylic acid acetate
Acetylsalicylate
Easprin
CHEBI:15365
A benzoic acid derivative carrying an acetoxy group at the 2-position.
http://www.ebi.ac.uk/efo/EFO_0001462
CC(=O)Oc1ccccc1C(O)=O
acetylsalicylic acid
acido acetilsalicilico
ASA
o-acetoxybenzoic acid
2-acetoxybenzoic acid
http://www.ebi.ac.uk/efo/EFO_0001463
C9H8O4
InChIKey=BSYNRYMUTXBXSQ-WXRBYKJCCW
o-carboxyphenyl acetate
O-acetylsalicylic acid
acidum acetylsalicylicum
acide acetylsalicylique
Acetylsalicylsaeure
2-Acetoxybenzenecarboxylic acid
Azetylsalizylsaeure
aspirin
acide 2-(acetyloxy)benzoique
InChI=1/C9H8O4/c1-6(10)13-8-5-3-2-4-7(8)9(11)12/h2-5H,1H3,(H,11,12)/f/h11H
aggressive insulitis
James Malone
Ele Holloway
An actinomycin that has formula C62H86N12O16.
CHEBI:27666
[H][C@@]12CCCN1C(=O)[C@H](NC(=O)[C@@H](NC(=O)c1ccc(C)c3oc4c(C)c(=O)c(N)c(C(=O)N[C@H]5[C@@H](C)OC(=O)[C@H](C(C)C)N(C)C(=O)CN(C)C(=O)[C@]6([H])CCCN6C(=O)[C@H](NC5=O)C(C)C)c4nc13)[C@@H](C)OC(=O)[C@H](C(C)C)N(C)C(=O)CN(C)C2=O)C(C)C
InChI=1/C62H86N12O16/c1-27(2)42-59(84)73-23-17-19-36(73)57(82)69(13)25-38(75)71(15)48(29(5)6)61(86)88-33(11)44(55(80)65-42)67-53(78)35-22-21-31(9)51-46(35)64-47-40(41(63)50(77)32(10)52(47)90-51)54(79)68-45-34(12)89-62(87)49(30(7)8)72(16)39(76)26-70(14)58(83)37-20-18-24-74(37)60(85)43(28(3)4)66-56(45)81/h21-22,27-30,33-34,36-37,42-45,48-49H,17-20,23-26,63H2,1-16H3,(H,65,80)(H,66,81)(H,67,78)(H,68,79)/t33-,34-,36+,37+,42-,43-,44+,45+,48+,49+/m1/s1/f/h65-68H
actinomycin IV
2-amino-4,6-dimethyl-3-oxo-1-N,9-N-bis-[(18aS)-10c,14,17-trimethyl-5,8,12,15,18-pentaoxo-6c,13t-di(propan-2-yl)-18ar-hexadecahydro-1H-pyrrolo[2,1-i][1,4,7,10,13]oxatetraazacyclohexadecin-9c-yl]-3H-phenoxazine-1,9-dicarboxamide
2-amino-N,N'-bis(hexadecahydro-2,5,9-trimethyl-6,13-bis(1-methylethyl)-1,4,7,11,14-pentaoxo-1H-pyrrolo(2,1-i)(1,4,7,10,13)oxatetra-azacyclohexadecin-10-yl)-4,6-dimethyl-3-oxo-3H-phenoxazine-1,9-dicarboxamide
C62H86N12O16
James Malone
http://www.ebi.ac.uk/efo/EFO_0001478
ActD
actinomycin D
InChIKey=RJURFGZVJUQBHK-HQANWYOLDQ
Dactinomycin
actinomycin C1
cardiovascular drugs
cardiovascular agent
http://www.ebi.ac.uk/efo/EFO_0001846
CHEBI:35554
A drug that affects the rate or intensity of cardiac contraction, blood vessel diameter or blood volume.
cardiovascular drug
James Malone
NCIt:C16731
NIFSTD:birnlex_429
NIFSTD:birnlex_699
Newborn[accessedResource: NIFSTD:birnlex_429][accessDate: 10-05-2010]
Tomasz Adamusiak
Newborn
neonate
An infant during the first month after birth.[accessedResource: NCIt:C16731][accessDate: 10-05-2010]
NEWBORN (0-27 DAYS)[accessedResource: NCIt:C16731][accessDate: 10-05-2010]
Neonatal[accessedResource: NCIt:C16731][accessDate: 10-05-2010]
An infant during the first month after birth.
Neonatal
James Malone
NEWBORN (0-27 DAYS)
NCIt:C53310
A study in which participants are examined at only a single time for characteristics of a disease.
A study in which participants are examined at only a single time for characteristics of a disease.[accessedResource: NCIt:C53310][accessDate: 10-05-2010]
cross sectional study
Tomasz Adamusiak
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158756&type=germplasm
CS57732 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158756&type=germplasm
CS57732
James Malone
COLO320HSR
James Malone
Ele Holloway
Tomasz Adamusiak
NCIt:C32885
islet cell
Jie Zheng
An Islet cell is a pancreatic cell that produces and secretes hormones such as insulin and glucagon.
A pancreatic cell that produces and secretes hormones such as insulin and glucagon.
A pancreatic cell that produces and secretes hormones such as insulin and glucagon.[accessedResource: NCIt:C32885][accessDate: 10-05-2010]
auxins
http://www.ebi.ac.uk/efo/EFO_0001818
CHEBI:22676
to grow
auxin
James Malone
Org 31710
antiprogestin
intestinal endoderm
Tomasz Adamusiak
Jie Zheng
http://www.arabidopsis.org/servlets/TairObject?id=1005158610&type=germplasm
CS57586 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158610&type=germplasm
CS57586
James Malone
NCIt:C12774
An artery arising from the right ventricle of the heart that carries deoxygenated blood to the lungs.[accessedResource: NCIt:C12774][accessDate: 10-05-2010]
pulmonary artery
Pulmonary Trunk[accessedResource: NCIt:C12774][accessDate: 10-05-2010]
An artery arising from the right ventricle of the heart that carries deoxygenated blood to the lungs.
An artery that conveys venous blood from the heart to the lungs.
BTO:0000778
James Malone
An artery that conveys venous blood from the heart to the lungs.[accessedResource: BTO:0000778][accessDate: 10-05-2010]
Pulmonary Trunk
true
A unit of measurement is a standardized quantity of a physical quality.
NIFSTD:birnlex_2015
http://www.ebi.ac.uk/efo/EFO_0001446
Jie Zheng
James Malone
MO_3
unit
Tomasz Adamusiak
(1S)-2-{[(1E)-1-[(3R,4R,5S)-3-(acetyloxy)-4-hydroxy-1-azabicyclo[3.1.0]hex-2-ylidene]-2-{[(1Z)-1-(hydroxymethylidene)-2-oxopropyl]amino}-2-oxoethyl]amino}-1-[(2S)-2-methyloxiran-2-yl]-2-oxoethyl 3-methoxy-5-methylnaphthalene-1-carboxylate
James Malone
InChI=1/C31H33N3O11/c1-14-7-6-8-18-19(14)9-17(42-5)10-20(18)30(41)45-27(31(4)13-43-31)29(40)33-23(28(39)32-21(12-35)15(2)36)24-26(44-16(3)37)25(38)22-11-34(22)24/h6-10,12,22,25-27,35,38H,11,13H2,1-5H3,(H,32,39)(H,33,40)/b21-12-,24-23+/t22-,25+,26+,27+,31-,34-/m0/s1/f/h32-33H
A naphthalene that has formula C31H33N3O11.
C31H33N3O11
InChIKey=QIKVYJOCQXXRSJ-CKKAGOBJDQ
[H][C@@]12C[N@@H]1C(\\[C@@H](OC(C)=O)[C@@H]2O)=C(\\NC(=O)[C@@H](OC(=O)c3cc(OC)cc4c(C)cccc34)[C@]5(C)CO5)C(=O)N\\C(=C/O)C(C)=O
azinomycin B
Ele Holloway
CHEBI:50862
http://www.ebi.ac.uk/efo/EFO_0002005
http://www.ebi.ac.uk/efo/EFO_0002400
REC1
James Malone
Ele Holloway
SAEL:112
1: The human or animal body apart from the head and appendages.n2: The thorax of an insect.[accessedResource: BTO:0001493][accessDate: 10-05-2010]
Organism subdivision which is the part of the body posterior to the head and anterior to the tail.
MAT:0000296
Organism subdivision which is the part of the body posterior to the head and anterior to the tail.[accessedResource: TAO:0001115][accessDate: 10-05-2010]
trunk
Tomasz Adamusiak
James Malone
Torso
NIFSTD:sao1078172392
FMAID:7181
1: The human or animal body apart from the head and appendages.n2: The thorax of an insect.
TAO:0001115
Torso[accessedResource: FMAID:7181][accessDate: 10-05-2010]
MFO:0001720
XAO:0003025
BTO:0001493
Subdivision of body proper, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with the ribcage, thoracic and lumbar vertebral column, sacrum and coccyx, it is partially surrounded by skin of trunk. Examples: There is only one trunk.
Subdivision of body proper, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with the ribcage, thoracic and lumbar vertebral column, sacrum and coccyx, it is partially surrounded by skin of trunk. Examples: There is only one trunk.[accessedResource: FMAID:7181][accessDate: 10-05-2010]
DOID:4887
rotavirus infection
Tomasz Adamusiak
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158834&type=germplasm
CS57810 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158834&type=germplasm
CS57810
James Malone
CCCC([O-])=O
n-butyrate
C4H7O2
butanoic acid, ion(1-)
CH3-[CH2]2-COO(-)
InChIKey=FERIUCNNQQJTOY-PAXZUDBGCU
butyrate
http://www.ebi.ac.uk/efo/EFO_0001496
butanoate
CHEBI:17968
A straight-chain saturated fatty acid anion that has formula C4H7O2.
InChI=1/C4H8O2/c1-2-3-4(5)6/h2-3H2,1H3,(H,5,6)/p-1/fC4H7O2/q-1
A fatty acid anion that has formula C4H7O2.
MAT:0000482
intestinal primordium
A primordium is a tissue modifier describing an organ or tissue in its earliest recognizable stage of development. For example, intestinal primordium.
primordium
James Malone
The area of the plant from where the stamen is shed.
stamen abscission zone
James Malone
<WEB> http://en.wikipedia.org/wiki/ChIP-on-chip
An experiment where chromatin immunoprecipitation (ChIP) is used in combination with microarray technology.
ChIP-Chip
James Malone
http://neurolex.org/wiki/Category:Hilus_of_dentate_gyrus
MA:0000953
hippocampus CA4
Tomasz Adamusiak
RM82
James Malone
Ele Holloway
A RM 82 is a cell line.
A RM 82 is both something that is bearer of a 39 s sarcoma, and something that derives from a Homo
sapiens.
RM 82
SNOMEDCT:30496006
Dilated cardiomyopathy secondary to viral myocarditis (disorder)
Dilated cardiomyopathy secondary to viral myocarditis
Dilated cardiomyopathy secondary to viral myocarditis[accessedResource: SNOMEDCT:30496006][accessDate: 10-05-2010]
Dilated cardiomyopathy secondary to viral myocarditis (disorder)[accessedResource: SNOMEDCT:30496006][accessDate: 10-05-2010]
viral cardiomyopathy
Tomasz Adamusiak
spiracle
spiracular gland[accessedResource: MAT:0000208][accessDate: 10-05-2010]
TGMA:0000578
The mostly slit-like opening on the body surface of the insects through which air is taken into the respiratory system.
FBbt:00005054
The mostly slit-like opening on the body surface of the insects through which air is taken into the respiratory system.[accessedResource: FBbt:00005054][accessDate: 10-05-2010]
"spiraculum"
spiracular gland
TADS:0000524
In its simplest form, the aperture or opening into a trachea (primary tracheal orifice); in most insects, sunken below the surface of the integument (secondary orifice) thus comprising a chamber, the spiracular atrium, and the external opening into this chamber, the spiracular opening.
"spiraculum"[accessedResource: TGMA:0000578][accessDate: 10-05-2010]
MAT:0000208
James Malone
In its simplest form, the aperture or opening into a trachea (primary tracheal orifice); in most insects, sunken below the surface of the integument (secondary orifice) thus comprising a chamber, the spiracular atrium, and the external opening into this chamber, the spiracular opening.[accessedResource: TGMA:0000578][accessDate: 10-05-2010]
BTO:0000497
ganglia
MAT:0000343
A group of nerve cell bodies located outside the central nervous system. The term is occasionally applied to certain nuclear groups within the brain or spinal cord, such as the basal ganglia.
Structures containing a collection of nerve cell bodies. (Source: BioGlossary, www.Biology-Text.com)[accessedResource: TAO:0000190][accessDate: 10-05-2010]
James Malone
TAO:0000190
ganglia[accessedResource: TAO:0000190][accessDate: 10-05-2010]
XAO:0000209
neural ganglion
EMAPA:16658
EHDAA:918
A group of nerve cell bodies located outside the central nervous system. The term is occasionally applied to certain nuclear groups within the brain or spinal cord, such as the basal ganglia.[accessedResource: BTO:0000497][accessDate: 10-05-2010]
ganglion
Structures containing a collection of nerve cell bodies. (Source: BioGlossary, www.Biology-Text.com)
neural ganglion[accessedResource: BTO:0000497][accessDate: 10-05-2010]
KYSE30
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158565&type=germplasm
CS57541 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158565&type=germplasm
CS57541
James Malone
http://www.ebi.ac.uk/efo/EFO_0001860
CHEBI:37733
cholinesterase inhibitor
James Malone
A7
James Malone
Ele Holloway
TAO:0000036
MA:0000324
EHDAA:2189
EV:0100088
EMAPA:16840
MAT:0000024
ZFA:0000036
James Malone
XAO:0000132
liver and biliary system
https://www.cbil.upenn.edu/RADQuerier/php/displayStudy.php?study_id=2424
C57Bl/6 derived nonobese diabetic (NOD) mouse strain.
NOD.B6
Tomasz Adamusiak
Jie Zheng
nervous system developmental tissue
rosette stage
C57BL6
JAX:000664
1.8
James Malone
Duplicate use EFO_0000605
obsolete_C57BL/6J
true
A/J is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/000664.html
Ductal Carcinoma of the Breast[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
Ductal Carcinoma[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
Duct Adenocarcinoma
Ductal Adenocarcinoma
NCIt:C4017
Ductal Carcinoma of Breast[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
obsolete_ductal breast carcinoma
DOID:3008
Duct Adenocarcinoma[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
A carcinoma arising from the ducts. While ductal carcinomas can arise at other sites, this term is universally used to refer to carcinomas of the breast. Ductal carcinomas account for about two thirds of all breast cancers. Two types of ductal carcinomas have been described: Ductal carcinoma in situ (DCIS) and invasive ductal carcinoma, not otherwise specified. The latter often spreads to the axillary lymph nodes and other anatomic sites. The two forms of ductal carcinoma often coexist.
A carcinoma arising from the ducts. While ductal carcinomas can arise at other sites, this term is universally used to refer to carcinomas of the breast. Ductal carcinomas account for about two thirds of all breast cancers. Two types of ductal carcinomas have been described: Ductal carcinoma in situ (DCIS) and invasive ductal carcinoma, not otherwise specified. The latter often spreads to the axillary lymph nodes and other anatomic sites. The two forms of ductal carcinoma often coexist.[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
Ductal Breast Carcinoma
ductal carcinoma
ductal breast carcinoma[accessedResource: DOID:3008][accessDate: 10-05-2010]
Duct Carcinoma
Ductal Carcinoma of the Breast
Ductal Carcinoma of Breast
Duct Carcinoma[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
1.5
James Malone
Duplicate with invasive ductal carcinoma (EFO_0000186)
true
ductal adenocarcinoma[accessedResource: DOID:3008][accessDate: 10-05-2010]
Medullary Breast Carcinoma with Lymphoid Stroma
Invasive Medullary Carcinoma of the Breast[accessedResource: NCIt:C9119][accessDate: 10-05-2010]
Invasive Medullary Carcinoma of the Breast
An infiltrating breast carcinoma with a relatively favorable prognosis. It is an uncommon carcinoma, accounting for fewer than 1% of all infiltrating breast carcinomas. It is well circumscribed, with soft cut surface and often of considerable size. Microscopically, the predominant growth pattern is syncytial with broad anastomosing bands or sheets of malignant cells. The malignant cells are round with abundant cytoplasm and vesicular nuclei. The sheets of malignant cells are associated with a marked lymphoplasmacytic infiltrate. Glandular or tubular structures are absent.[accessedResource: NCIt:C9119][accessDate: 10-05-2010]
An infiltrating breast carcinoma with a relatively favorable prognosis. It is an uncommon carcinoma, accounting for fewer than 1% of all infiltrating breast carcinomas. It is well circumscribed, with soft cut surface and often of considerable size. Microscopically, the predominant growth pattern is syncytial with broad anastomosing bands or sheets of malignant cells. The malignant cells are round with abundant cytoplasm and vesicular nuclei. The sheets of malignant cells are associated with a marked lymphoplasmacytic infiltrate. Glandular or tubular structures are absent.
Medullary Breast Carcinoma with Lymphoid Stroma[accessedResource: NCIt:C9119][accessDate: 10-05-2010]
Medullary Carcinoma of the Breast[accessedResource: NCIt:C9119][accessDate: 10-05-2010]
Medullary carcinoma of breast
Infiltrating Medullary Carcinoma of Breast
Infiltrating Medullary Carcinoma of the Breast[accessedResource: NCIt:C9119][accessDate: 10-05-2010]
Medullary Carcinoma of the Breast
medullary breast carcinoma
Invasive Medullary Breast Carcinoma[accessedResource: NCIt:C9119][accessDate: 10-05-2010]
Invasive Medullary Carcinoma of Breast[accessedResource: NCIt:C9119][accessDate: 10-05-2010]
Invasive Medullary Breast Carcinoma
Medullary carcinoma of breast[accessedResource: DOID:5605][accessDate: 10-05-2010]
Invasive Medullary Carcinoma of Breast
Infiltrating Medullary Carcinoma of the Breast
Infiltrating Medullary Carcinoma of Breast[accessedResource: NCIt:C9119][accessDate: 10-05-2010]
James Malone
DOID:5605
NCIt:C9119
An assay in which the transcriptome of a biological sample is analysed using array technology.
transcription profiling by array
BxPC3 cell[accessedResource: BTO:0001861][accessDate: 10-05-2010]
Human pancreatic adenocarcinoma cell line, established from a 61 year old human female.[accessedResource: BTO:0001861][accessDate: 10-05-2010]
HTL96012
BTO:0001861
Human pancreatic adenocarcinoma cell line, established from a 61 year old human female.
BxPC3 cell
BxPC-3
BxPC-3 cell
Ele Holloway
BxPC3
Bx-PC3 cell[accessedResource: BTO:0001861][accessDate: 10-05-2010]
BxPC-3 cell[accessedResource: BTO:0001861][accessDate: 10-05-2010]
Bx-PC3 cell
James Malone
mitochondrial complex I inhibitors
mitochondrial complex I inhibitor
mitochondrial NADH dehydrogenase inhibitor
http://www.ebi.ac.uk/efo/EFO_0001869
CHEBI:38498
mitochondrial NADH:ubiquinone reductase inhibitor
James Malone
CRISP Thesaurus 2006, Term Number 2000-0386, http://crisp.cit.nih.gov/Thesaurus/00000107.htm Date accessed: 1st Novemeber 2007
A type of carcinoma derived from glandular tissue or in which tumor cells form recognizable glandular structures.
adenocarcinoma
James Malone
SNB19
James Malone
Ele Holloway
Western gorilla
http://www.ebi.ac.uk/efo/EFO_0002641
Gorilla gorilla
James Malone
precursor B cell[accessedResource: CL:0000817][accessDate: 10-05-2010]
CL:0000817
A precursor B cell is a B cell with the phenotype CD10-positive (P08473/NEP_HUMAN; PIRSF001194).[accessedResource: CL:0000817][accessDate: 10-05-2010]
B-cell precursor
James Malone
pre-B cell
A precursor B cell is a B cell with the phenotype CD10-positive (P08473/NEP_HUMAN; PIRSF001194).
pre-BI cell
sham therapy[accessedResource: NCIt:C753][accessDate: 10-05-2010]
An inactive substance, treatment or procedure that is intended to provide baseline measurements for the experimental protocol of a clinical trial.
sham therapy
James Malone
An inactive substance, treatment or procedure that is intended to provide baseline measurements for the experimental protocol of a clinical trial.[accessedResource: NCIt:C753][accessDate: 10-05-2010]
NCIt:C753
PLCB[accessedResource: NCIt:C753][accessDate: 10-05-2010]
PLCB
placebo
FBbt:00005662
embryonic central brain
James Malone
(CH3)2SO
InChIKey=IAZDPXIOMUYVGZ-UHFFFAOYAR
methylsulfinylmethane
dimethyli sulfoxidum
InChI=1/C2H6OS/c1-4(2)3/h1-2H3
CS(C)=O
James Malone
dimethyl sulfoxide
Dimethylsulfoxid
dimetil sulfoxido
CHEBI:28262
A 2-carbon sulfoxide in which the sulfur atom has two methyl substituents.
dimethyl sulphoxide
C2H6OS
(methanesulfinyl)methane
dimethyl sulfur oxide
dimethylsulfoxyde
S(O)Me2
DMSO
http://www.ebi.ac.uk/efo/EFO_0001523
sulfinylbis(methane)
A sulfoxide that has formula C2H6OS.
AU565
James Malone
Ele Holloway
F13
Normal pancreatic cell line
James Malone
FMAID:3897
proximal portion of circumflex branch of left coronary artery
Tomasz Adamusiak
Jie Zheng
DOID:4989
INFLAMMATION of the PANCREAS. Pancreatitis is classified as acute unless there are computed tomographic or endoscopic retrograde cholangiopancreatographic findings of CHRONIC PANCREATITIS (International Symposium on Acute Pancreatitis, Atlanta, 1992). The two most common forms of acute pancreatitis are ALCOHOLIC PANCREATITIS and gallstone pancreatitis.[accessedResource: MSH:D010195][accessDate: 10-05-2010]
SNOMEDCT:75694006
Inflammation of the pancreas.[accessedResource: NCIt:C3306][accessDate: 10-05-2010]
GeneRIF:12011155
GeneRIF:12825076
GeneRIF:12765848
GeneRIF:12401800
GeneRIF:11961487
GeneRIF:15215328
GeneRIF:12360463
INFLAMMATION of the PANCREAS. Pancreatitis is classified as acute unless there are computed tomographic or endoscopic retrograde cholangiopancreatographic findings of CHRONIC PANCREATITIS (International Symposium on Acute Pancreatitis, Atlanta, 1992). The two most common forms of acute pancreatitis are ALCOHOLIC PANCREATITIS and gallstone pancreatitis.
GeneRIF:12227654
MSH:D010195
Pancreatitis (disorder)
GeneRIF:15237442
GeneRIF:11702203
GeneRIF:11462247
Pancreatitis (disorder)[accessedResource: DOID:4989][accessDate: 10-05-2010]
Pancreatitis NOS
GeneRIF:16038043
NCIt:C3306
James Malone
GeneRIF:14526128
GeneRIF:15775704
Pancreatitides
GeneRIF:14762792
GeneRIF:11825647
Pancreatitis, NOS[accessedResource: SNOMEDCT:75694006][accessDate: 10-05-2010]
pancreatitis
GeneRIF:14688470
Inflammation of the pancreas.
GeneRIF:16230078
Pancreatitides[accessedResource: MSH:D010195][accessDate: 10-05-2010]
GeneRIF:15184081
GeneRIF:15458925
GeneRIF:12120224
GeneRIF:15786540
GeneRIF:12360464
GeneRIF:15572849
GeneRIF:15316224
true
obsolete_biomaterial factor
redundant use material entity
WE-68
James Malone
Ele Holloway
A volume unit which is equal to one tenth of a liter or 10^[-1] L.
James Malone
Tomasz Adamusiak
MO_624
dl
http://www.ebi.ac.uk/efo/EFO_0001716
Jie Zheng
true
deciliter
A deciliter is a volume unit which is equal to one tenth of a liter or 10^-1 L.
The largest of the three paired salivary glands, located in front of the ear.
Parotid[accessedResource: NCIt:C12427][accessDate: 10-05-2010]
Jie Zheng
The largest of the three paired salivary glands, located in front of the ear.[accessedResource: NCIt:C12427][accessDate: 10-05-2010]
Parotid
parotid gland
NCIt:C12427
Tomasz Adamusiak
RGD:1359002
Wistar-Kyoto
James Malone
FBbt:00005665
embryonic central brain neuron
James Malone
FBbt:00005527
James Malone
dorsal ectodermal primordium
dorEcP2[accessedResource: FBbt:00005527][accessDate: 10-05-2010]
dorsal ectoderm primordium
dorsal ectodermal primordium[accessedResource: FBbt:00005527][accessDate: 10-05-2010]
dorEcP2
James Malone
bronchial epithelial
alveolar epithelial type I
bronchoalveolar lavage cell
bronchial epithelial cells
alveolar epithelial type II
true
1.9
obsolete_epithelial cell of lung
CL:0000082
compound term epithelial cell + lung
HSSultan
James Malone
Ele Holloway
esophageal endoderm
Tomasz Adamusiak
Jie Zheng
mass spectrometry assay
SKNFI
James Malone
Ele Holloway
CHEBI:53461
http://www.ebi.ac.uk/efo/EFO_0002737
neuropeptide S
Tomasz Adamusiak
Ele Holloway
Organism subdivision which is the part of the body which consists of the cranial and pharyngeal regions.[accessedResource: ZFA:0001114][accessDate: 10-05-2010]
craniofacial tissue
head tissue
Organism subdivision which is the part of the body which consists of the cranial and pharyngeal regions.
epicranial plate[accessedResource: MAT:0000017][accessDate: 10-05-2010]
James Malone
head tissue[accessedResource: MAT:0000017][accessDate: 10-05-2010]
MAT:0000017
MA:0000316
The larval cranium exclusive of the dorsal apotome.
FBbt:00003007
TGMA:0000720
epicranial plate
The larval cranium exclusive of the dorsal apotome.[accessedResource: TGMA:0000720][accessDate: 10-05-2010]
ZFA:0001114
http://www.ebi.ac.uk/efo/EFO_0002700
A mass spectrometer is an instrument which is used to measure the mass to charge ratio of ions. All mass spectrometers consist of three basic parts: an ion source, a mass analyzer, and a detector system. The stages within the mass spectrometer are: 1. Production of ions from the sample 2. Separation of ions with different masses 3. Detection of the number of ions of each mass produced 4.Collection of data to generate the mass spectrum
mass spectrometer
PATO:0000117
Size is a morphology quality which describes a material entity's physical magnitude.
A morphology quality inhering in a bearer by virtue of the bearer's physical magnitude.
A morphology quality inhering in a bearer by virtue of the bearer's physical magnitude.[accessedResource: PATO:0000117][accessDate: 10-05-2010]
size
James Malone
Hb-SS disease without crisis[accessedResource: DOID:10923][accessDate: 10-05-2010]
GeneRIF:12850481
ICD9:282.69
SNOMEDCT:127040003
GeneRIF:15834635
Haemoglobin S disease
Sickle cell anaemia[accessedResource: SNOMEDCT:127040003][accessDate: 10-05-2010]
Drepanocythemia[accessedResource: SNOMEDCT:127040003][accessDate: 10-05-2010]
Hereditary hemoglobinopathy disorder homozygous for hemoglobin S[accessedResource: SNOMEDCT:127040003][accessDate: 10-05-2010]
GeneRIF:14579408
Hemoglobin S-S disease[accessedResource: SNOMEDCT:127040003][accessDate: 10-05-2010]
Haemoglobin S-S disease
GeneRIF:15153712
Sickle cell anemia NOS (disorder)[accessedResource: SNOMEDCT:191199004][accessDate: 10-05-2010]
Sickle-cell disease, unspecified[accessedResource: ICD9:282.60][accessDate: 10-05-2010]
Sickle cell anemia of unspecified type (disorder)
Hemoglobin S disease
DOID:10923
Hemoglobin S disease without crisis (disorder)[accessedResource: DOID:10923][accessDate: 10-05-2010]
ICD9:282.6
GeneRIF:15297857
GeneRIF:11869935
Hemoglobin SS disease without crisis (disorder)
Hemoglobin S-S disease
GeneRIF:15388579
Sickle cell anaemia NOS
Other sickle-cell disease without crisis[accessedResource: ICD9:282.68][accessDate: 10-05-2010]
Drepanocythemia
HB-SS DIS NEC W CRISIS
Haemoglobin S disease[accessedResource: SNOMEDCT:127040003][accessDate: 10-05-2010]
Other sickle-cell disease without crisis
GeneRIF:15609334
GeneRIF:12677174
Hemoglobin S disease without crisis (disorder)
Other sickle-cell disease with crisis
A blood disorder characterized by the appearance of sickle-shaped red blood cells and anemia.[accessedResource: NCIt:C34383][accessDate: 10-05-2010]
Sickle cell syndrome[accessedResource: SNOMEDCT:127040003][accessDate: 10-05-2010]
ICD9:282.68
Hb S disease
Sickle cell anaemia NOS[accessedResource: SNOMEDCT:191199004][accessDate: 10-05-2010]
GeneRIF:15556687
SNOMEDCT:191195005
Sickle cell anemia NOS (disorder)
Hb S disease[accessedResource: SNOMEDCT:127040003][accessDate: 10-05-2010]
SNOMEDCT:191199004
Sickle cell anemia of unspecified type[accessedResource: SNOMEDCT:191195005][accessDate: 10-05-2010]
Hemoglobin SS disease without crisis (disorder)[accessedResource: DOID:10923][accessDate: 10-05-2010]
GeneRIF:15023184
GeneRIF:14967817
GeneRIF:12773623
Hemoglobin S disease[accessedResource: SNOMEDCT:127040003][accessDate: 10-05-2010]
Drepanocythaemia[accessedResource: SNOMEDCT:127040003][accessDate: 10-05-2010]
Sickle cell anemia NOS
GeneRIF:12714517
GeneRIF:15271798
GeneRIF:12549821
GeneRIF:12673836
Sickle-cell disease, unspecified
GeneRIF:12928439
Sickle cell anemia of unspecified type
Hereditary hemoglobinopathy disorder homozygous for hemoglobin S (disorder)
Hereditary hemoglobinopathy disorder homozygous for hemoglobin S
Hb-SS disease without crisis
SICKLE CELL DISEASE NOS
sickle cell disease
GeneRIF:14683458
Sickle cell anemia of unspecified type (disorder)[accessedResource: SNOMEDCT:191195005][accessDate: 10-05-2010]
HB-S DIS W/O CRISIS NEC[accessedResource: ICD9:282.68][accessDate: 10-05-2010]
Sickle cell anaemia of unspecified type[accessedResource: SNOMEDCT:191195005][accessDate: 10-05-2010]
Other sickle-cell disease with crisis[accessedResource: ICD9:282.69][accessDate: 10-05-2010]
Sickle Cell Anemia
SICKLE CELL DISEASE NOS[accessedResource: ICD9:282.60][accessDate: 10-05-2010]
GeneRIF:12601490
NCIt:C34383
GeneRIF:15586174
GeneRIF:15855323
Hb SS disease[accessedResource: SNOMEDCT:127040003][accessDate: 10-05-2010]
ICD9:282.60
Sickle cell anemia NOS[accessedResource: SNOMEDCT:191199004][accessDate: 10-05-2010]
Sickle cell anemia[accessedResource: SNOMEDCT:127040003][accessDate: 10-05-2010]
Drepanocythaemia
HB-SS DIS NEC W CRISIS[accessedResource: ICD9:282.69][accessDate: 10-05-2010]
Sickle cell syndrome
Hb SS disease
James Malone
Hereditary hemoglobinopathy disorder homozygous for hemoglobin S (disorder)[accessedResource: SNOMEDCT:127040003][accessDate: 10-05-2010]
A blood disorder characterized by the appearance of sickle-shaped red blood cells and anemia.
GeneRIF:15662557
GeneRIF:14755370
Haemoglobin S-S disease[accessedResource: SNOMEDCT:127040003][accessDate: 10-05-2010]
Sickle cell anaemia of unspecified type
Sickle cell anaemia
GeneRIF:15556291
HB-S DIS W/O CRISIS NEC
CL:0000784
plasmacytoid T cell[accessedResource: CL:0000784][accessDate: 10-05-2010]
A dendritic cell type of distinct morphology, localization, and surface marker expression from other dendritic cell types and associated with early stage immune responses, particularly the release of physiologically abundant amounts of type I interferons in response to infection.[accessedResource: CL:0000784][accessDate: 10-05-2010]
T-associated plasma cell[accessedResource: CL:0000784][accessDate: 10-05-2010]
plasmacytoid dendritic cell
IPC[accessedResource: CL:0000784][accessDate: 10-05-2010]
DC2
A dendritic cell type of distinct morphology, localization, and surface marker expression from other dendritic cell types and associated with early stage immune responses, particularly the release of physiologically abundant amounts of type I interferons in response to infection.
James Malone
lymphoid dendritic cell
T-associated plasma cell
DC2[accessedResource: CL:0000784][accessDate: 10-05-2010]
plasmacytoid monocyte[accessedResource: CL:0000784][accessDate: 10-05-2010]
lymphoid dendritic cell[accessedResource: CL:0000784][accessDate: 10-05-2010]
IPC
interferon-producing cell[accessedResource: CL:0000784][accessDate: 10-05-2010]
plasmacytoid T cell
pDC[accessedResource: CL:0000784][accessDate: 10-05-2010]
pDC
plasmacytoid monocyte
interferon-producing cell
[X]Chronic and other pulmonary manifestations due to radiation
Respiratory conditions due to other specified external agents[accessedResource: ICD9:508.8][accessDate: 10-05-2010]
LUNG INVOLV IN OTH DIS[accessedResource: ICD9:517.8][accessDate: 10-05-2010]
MEDIASTINUM DISEASE NEC[accessedResource: ICD9:519.3][accessDate: 10-05-2010]
Respiratory disease
Disease of respiratory system, NOS
Unspecified alveolar and parietoalveolar pneumonopathy
NCIt:C26871
RESP SYSTEM DISEASE NOS
Respiratory system diseases NOS (disorder)
ICD9:517.8
James Malone
Respiratory conditions due to unspecified external agent[accessedResource: ICD9:508.9][accessDate: 10-05-2010]
[X]Respiratory conditions due to unspecified external agent[accessedResource: SNOMEDCT:196244004][accessDate: 10-05-2010]
[X]Other diseases of the respiratory system
[X]Respiratory conditions due to unspecified external agent (disorder)[accessedResource: SNOMEDCT:196244004][accessDate: 10-05-2010]
RESP COND: EXT AGENT NEC
ALVEOL PNEUMONOPATHY NOS
Respiratory system diseases NOS
Respiratory conditions due to unspecified external agent
Other specified alveolar and parietoalveolar pneumonopathies[accessedResource: ICD9:516.8][accessDate: 10-05-2010]
Disorder of respiratory system[accessedResource: SNOMEDCT:50043002][accessDate: 10-05-2010]
Other diseases of mediastinum, not elsewhere classified[accessedResource: ICD9:519.3][accessDate: 10-05-2010]
Respiratory system diseases NOS (disorder)[accessedResource: SNOMEDCT:196185004][accessDate: 10-05-2010]
SNOMEDCT:196244004
Respiratory disorder[accessedResource: SNOMEDCT:50043002][accessDate: 10-05-2010]
[X]Respiratory conditions due to other specified external agents
Other diseases of respiratory system, not elsewhere classified
RESP SYSTEM DISEASE NEC
ICD9:519.1
respiratory system disease
[X]Other diseases of the respiratory system (disorder)
Disease of respiratory system
Respiratory disease[accessedResource: SNOMEDCT:50043002][accessDate: 10-05-2010]
SNOMEDCT:196255004
[X]Other diseases of the respiratory system (disorder)[accessedResource: SNOMEDCT:196255004][accessDate: 10-05-2010]
SNOMEDCT:50043002
Other respiratory system diseases (disorder)
[X]Chronic and other pulmonary manifestations due to radiation (disorder)[accessedResource: SNOMEDCT:196241007][accessDate: 10-05-2010]
Respiratory Disorder
Disorder of respiratory system (disorder)[accessedResource: SNOMEDCT:50043002][accessDate: 10-05-2010]
ICD9:519.9
CHR PUL MANIF D/T RADIAT
Other diseases of respiratory system, not elsewhere classified[accessedResource: ICD9:519.8][accessDate: 10-05-2010]
Pneumoconiosis due to other inorganic dust
Disease of respiratory system (disorder)
Other diseases of respiratory system NOS (disorder)[accessedResource: SNOMEDCT:196184000][accessDate: 10-05-2010]
RESP COND: EXT AGENT NOS[accessedResource: ICD9:508.9][accessDate: 10-05-2010]
RESP SYSTEM DISEASE NEC[accessedResource: ICD9:519.8][accessDate: 10-05-2010]
Disease of respiratory system, NOS[accessedResource: SNOMEDCT:50043002][accessDate: 10-05-2010]
Other respiratory system diseases NOS[accessedResource: SNOMEDCT:266373008][accessDate: 10-05-2010]
ICD9:508
Other specified alveolar and parietoalveolar pneumonopathies
ICD9:516.8
[X]Respiratory conditions due to other specified external agents (disorder)[accessedResource: SNOMEDCT:196243005][accessDate: 10-05-2010]
SNOMEDCT:196185004
Other diseases of respiratory system NOS[accessedResource: SNOMEDCT:196184000][accessDate: 10-05-2010]
Unspecified disease of respiratory system[accessedResource: ICD9:519.9][accessDate: 10-05-2010]
INORG DUST PNEUMOCON NEC[accessedResource: ICD9:503][accessDate: 10-05-2010]
DOID:1579
Lung involvement in other diseases classified elsewhere[accessedResource: ICD9:517.8][accessDate: 10-05-2010]
ICD9:516.9
ALVEOL PNEUMONOPATHY NEC
ICD9:500-508.99
Other diseases of respiratory system NOS
Other diseases of respiratory system NOS (disorder)
Disorder of respiratory system (disorder)
ICD9:508.9
ICD9:519
ICD9:519.3
ICD9:508.1
[X]Other diseases of the respiratory system[accessedResource: SNOMEDCT:196255004][accessDate: 10-05-2010]
Disease of respiratory system (disorder)[accessedResource: SNOMEDCT:50043002][accessDate: 10-05-2010]
Respiratory disorder, NOS[accessedResource: SNOMEDCT:50043002][accessDate: 10-05-2010]
RESP SYSTEM DISEASE NOS[accessedResource: ICD9:519.9][accessDate: 10-05-2010]
Other respiratory system diseases NOS (disorder)[accessedResource: SNOMEDCT:266373008][accessDate: 10-05-2010]
ICD9:516
Chronic and other pulmonary manifestations due to radiation
Other respiratory system diseases NOS
SNOMEDCT:196184000
SNOMEDCT:196241007
Respiratory system diseases NOS[accessedResource: SNOMEDCT:196185004][accessDate: 10-05-2010]
RESP COND: EXT AGENT NOS
INORG DUST PNEUMOCON NEC
RESP COND: EXT AGENT NEC[accessedResource: ICD9:508.8][accessDate: 10-05-2010]
SNOMEDCT:266373008
MEDIASTINUM DISEASE NEC
Pneumoconiosis due to other inorganic dust[accessedResource: ICD9:503][accessDate: 10-05-2010]
SNOMEDCT:196243005
ICD9:519.8
Respiratory disorder, NOS
A body system disease that occurs in different organs functioning in respiration and consisting especially of the nose, nasal passages, nasopharynx, larynx, trachea, bronchi, and lungs.[accessedResource: DOID:1579][accessDate: 10-05-2010]
ALVEOL PNEUMONOPATHY NEC[accessedResource: ICD9:516.8][accessDate: 10-05-2010]
Chronic and other pulmonary manifestations due to radiation[accessedResource: ICD9:508.1][accessDate: 10-05-2010]
Unspecified alveolar and parietoalveolar pneumonopathy[accessedResource: ICD9:516.9][accessDate: 10-05-2010]
[X]Respiratory conditions due to unspecified external agent (disorder)
SNOMEDCT:196057004
Other diseases of mediastinum, not elsewhere classified
Other respiratory system diseases
[X]Respiratory conditions due to unspecified external agent
Other respiratory system diseases NOS (disorder)
Lung involvement in other diseases classified elsewhere
Disorder of respiratory system
[X]Chronic and other pulmonary manifestations due to radiation[accessedResource: SNOMEDCT:196241007][accessDate: 10-05-2010]
LUNG INVOLV IN OTH DIS
ICD9:517
[X]Chronic and other pulmonary manifestations due to radiation (disorder)
Disease of respiratory system[accessedResource: SNOMEDCT:50043002][accessDate: 10-05-2010]
Other respiratory system diseases (disorder)[accessedResource: SNOMEDCT:196057004][accessDate: 10-05-2010]
[X]Respiratory conditions due to other specified external agents[accessedResource: SNOMEDCT:196243005][accessDate: 10-05-2010]
Other respiratory system diseases[accessedResource: SNOMEDCT:196057004][accessDate: 10-05-2010]
A body system disease that occurs in different organs functioning in respiration and consisting especially of the nose, nasal passages, nasopharynx, larynx, trachea, bronchi, and lungs.
Respiratory conditions due to other specified external agents
ALVEOL PNEUMONOPATHY NOS[accessedResource: ICD9:516.9][accessDate: 10-05-2010]
Unspecified disease of respiratory system
[X]Respiratory conditions due to other specified external agents (disorder)
ICD9:460-519.99
ICD9:503
CHR PUL MANIF D/T RADIAT[accessedResource: ICD9:508.1][accessDate: 10-05-2010]
ICD9:508.8
ICD9:510-519.99
MO_347
in vitro design
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158738&type=germplasm
CS57714 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158738&type=germplasm
CS57714
James Malone
A CADO ES1 is a cell line.
A CADO ES1 is both something that is bearer of a 39 s sarcoma, and something that derives from Homo sapiens.
CADO ES1
James Malone
Ele Holloway
cAMP
Adenosine 3',5'-phosphate
Cyclic adenylic acid
CHEBI:17489
InChIKey=IVOMOUWHDPKRLL-BJEHYBLCDS
(2R,4aR,6R,7R,7aS)-6-(6-amino-9H-purin-9-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol 2-oxide
A 3',5'-cyclic purine nucleotide that has formula C10H12N5O6P.
Cyclic AMP
InChI=1/C10H12N5O6P/c11-8-5-9(13-2-12-8)15(3-14-5)10-6(16)7-4(20-10)1-19-22(17,18)21-7/h2-4,6-7,10,16H,1H2,(H,17,18)(H2,11,12,13)/t4-,6-,7-,10-/m1/s1/f/h17H,11H2
Nc1ncnc2n(cnc12)[C@@H]1O[C@@H]2COP(O)(=O)O[C@H]2[C@H]1O
ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
3',5'-cyclic AMP
C10H12N5O6P
adenosine 3',5'-(hydrogen phosphate)
http://www.ebi.ac.uk/efo/EFO_0001471
The antibody used to precipitate an antigen out of a solution during the process of immunoprecipitation.
immunoprecipitate
James Malone
A temperature unit is a base unit which is a standard measure of the average kinetic energy of the particles in a sample of matter.
Tomasz Adamusiak
MO_48
http://www.ebi.ac.uk/efo/EFO_0001682
A base unit which is a standard measure of the average kinetic energy of the particles in a sample of matter.
James Malone
temperature unit
Jie Zheng
true
raphe magnus
James Malone
Ele Holloway
IDOMAL:0000296
The distinct stages of the life cycle of a protozoon of the genus Plasmodium.
The distinct stages of the life cycle of a protozoon of the genus Plasmodium.[accessedResource: IDOMAL:0000296][accessDate: 10-05-2010]
plasmodium parasite stage
Tomasz Adamusiak
Jie Zheng
Squamous Cell Carcinoma of the Head and Neck[accessedResource: NCIt:C34447][accessDate: 10-05-2010]
SCCHN
Carcinoma of the Head and Neck[accessedResource: NCIt:C35850][accessDate: 10-05-2010]
James Malone
SCCHN[accessedResource: NCIt:C34447][accessDate: 10-05-2010]
Squamous Cell Carcinoma of the Head and Neck
Carcinoma of Head and Neck[accessedResource: NCIt:C35850][accessDate: 10-05-2010]
Squamous Cell Carcinoma of Head and Neck[accessedResource: NCIt:C34447][accessDate: 10-05-2010]
NCIt:C35850
head and neck squamous cell carcinoma
NCIt:C34447
Head and Neck Carcinoma
A carcinoma of any tissue within the head and neck region.[accessedResource: NCIt:C35850][accessDate: 10-05-2010]
DOID:5520
Carcinoma of the Head and Neck
Carcinoma of Head and Neck
A carcinoma of any tissue within the head and neck region.
Squamous Cell Carcinoma of Head and Neck
Head and Neck Carcinoma[accessedResource: NCIt:C35850][accessDate: 10-05-2010]
Bornean Orangutan
http://www.ebi.ac.uk/efo/EFO_0002653
Pongo pygmaeus
James Malone
The outer non-living layer of the integumentary system derived from the epidermis.
cuticle[accessedResource: MAT:0000150][accessDate: 10-05-2010]
The outer non-living layer of the integumentary system derived from the epidermis.[accessedResource: FBbt:00004970][accessDate: 10-05-2010]
MAT:0000150
exoskeleton
James Malone
cuticle
FBbt:00004970
MO_953
organism part comparison design
Tomasz Adamusiak
urinary system
renal system
EMAPA:17366
excretory system[accessedResource: MAT:0000027][accessDate: 10-05-2010]
FBbt:00005056
SAEL:116
WBbt:0005736
Systema urinaria
Systema urinaria[accessedResource: FMAID:7159][accessDate: 10-05-2010]
ZFA:0000163
EV:0100095
MAT:0000027
renal/urinary system[accessedResource: MAT:0000027][accessDate: 10-05-2010]
EHDAA:5901
renal/urinary system
FMAID:7159
urinary system[accessedResource: MAT:0000027][accessDate: 10-05-2010]
James Malone
excretory system
XAO:0000143
TADS:0000162
TAO:0000163
Tomasz Adamusiak
cingulate cortex
NIFSTD:birnlex_934
James Malone
cingulate cortex homogenate
NCIt:C52713
James Malone
1: The lower jaw of a vertebrate animal. n2. Either the upper or lower part of the beak in birds.
1: The lower jaw of a vertebrate animal. n2. Either the upper or lower part of the beak in birds.[accessedResource: BTO:0001748][accessDate: 10-05-2010]
BTO:0001748
mandible
lower jaw bone
mandibula[accessedResource: BTO:0001748][accessDate: 10-05-2010]
mandibula
http://www.ebi.ac.uk/efo/EFO_0001529
estradiol
Calu-6
Calu6
James Malone
Ele Holloway
CL:0000679
glutamatergic neuron
James Malone
GeneRIF:15002062
GeneRIF:14763917
Obesities, Morbid
Morbid Obesities[accessedResource: MSH:D009767][accessDate: 10-05-2010]
Morbid obesity (disorder)
DOID:11981
morbid obesity
GeneRIF:16160866
ICD9:278.01
Extreme form of obesity where body bass index is 40 or more, which is roughly equivalent to 100 pounds or more over ideal body weight.[accessedResource: NIFSTD:nlx_dys_20090303][accessDate: 10-05-2010]
The condition of weighing two, three, or more times the ideal weight, so called because it is associated with many serious and life-threatening disorders. In the BODY MASS INDEX, morbid obesity is defined as having a BMI greater than 40.0 kg/m2.
GeneRIF:12870165
GeneRIF:14764818
NIFSTD:nlx_dys_20090303
GeneRIF:12032643
GeneRIF:15235769
Extreme form of obesity where body bass index is 40 or more, which is roughly equivalent to 100 pounds or more over ideal body weight.
James Malone
GeneRIF:12883487
The condition of weighing two, three, or more times the ideal weight, so called because it is associated with many serious and life-threatening disorders. In the BODY MASS INDEX, morbid obesity is defined as having a BMI greater than 40.0 kg/m2.[accessedResource: MSH:D009767][accessDate: 10-05-2010]
GeneRIF:15919838
Severe obesity
GeneRIF:12032749
MSH:D009767
Tomasz Adamusiak
Severe obesity[accessedResource: DOID:11981][accessDate: 10-05-2010]
GeneRIF:12148087
SNOMEDCT:238136002
Morbid obesity (disorder)[accessedResource: DOID:11981][accessDate: 10-05-2010]
GeneRIF:12647279
GeneRIF:16253647
GeneRIF:12822042
MERGED DEFINITION:nTARGET DEFINITION: The small, non-neural, interstitial cells of mesodermal origin that form part of the supporting structure of the central nervous system. They are of various forms and may have slender branched processes. They are migratory and act as phagocytes to waste products of nerve tissue. n--------------------nSOURCE DEFINITION: One of the small interstitial phagocytic cells of the microglia.
microgliocyte
MERGED DEFINITION:nTARGET DEFINITION: The small, non-neural, interstitial cells of mesodermal origin that form part of the supporting structure of the central nervous system. They are of various forms and may have slender branched processes. They are migratory and act as phagocytes to waste products of nerve tissue. n--------------------nSOURCE DEFINITION: One of the small interstitial phagocytic cells of the microglia.[accessedResource: BTO:0000078][accessDate: 10-05-2010]
mixed glial cells (predominantly microglia)
NIFSTD:sao789292116
James Malone
microgliocyte[accessedResource: BTO:0000078][accessDate: 10-05-2010]
BTO:0000078
microglial cell
microglia[accessedResource: NIFSTD:sao789292116][accessDate: 10-05-2010]
microglia
A central nervous system macrophage found in the parenchyma of the central nervous system.
A small, migratory, phagocytic, interstitial cell of hematopoietic origin found in the central nervous system. Microglial cells are of various forms and may have slender branched processes.
Hortega cell
A central nervous system macrophage found in the parenchyma of the central nervous system.[accessedResource: CL:0000129][accessDate: 10-05-2010]
A small, migratory, phagocytic, interstitial cell of hematopoietic origin found in the central nervous system. Microglial cells are of various forms and may have slender branched processes.[accessedResource: NIFSTD:sao789292116][accessDate: 10-05-2010]
Tomasz Adamusiak
CL:0000129
Hortega cell[accessedResource: BTO:0000078][accessDate: 10-05-2010]
The pressure exerted by a liquid as a result of its potential energy, ignoring its kinetic energy.
hydrostatic pressure
James Malone
InChIKey=KVWDHTXUZHCGIO-UHFFFAOYAQ
InChI=1/C17H20N4S/c1-12-11-13-16(21-9-7-20(2)8-10-21)18-14-5-3-4-6-15(14)19-17(13)22-12/h3-6,11,19H,7-10H2,1-2H3
olanzapine
James Malone
FBbt:00005668
embryonic frontal ganglion
James Malone
HTLV-Associated Leukemia-Lymphomas
GeneRIF:15827121
ATLL[accessedResource: MSH:D015459][accessDate: 10-05-2010]
GeneRIF:15990867
T-Cell Type Acute Leukemia[accessedResource: NCIt:C3183][accessDate: 10-05-2010]
Leukemia-Lymphomas, HTLV-Associated[accessedResource: MSH:D015459][accessDate: 10-05-2010]
Leukemia-Lymphomas, Adult T-Cell[accessedResource: MSH:D015459][accessDate: 10-05-2010]
MSH:D015459
HTLV Associated Leukemia Lymphoma
Aggressive T-Cell malignancy with adult onset, caused by HUMAN T-LYMPHOTROPIC VIRUS 1. It is endemic in Japan, the Caribbean basin, Southeastern United States, Hawaii, and parts of Central and South America and sub-Saharan Africa.
T Acute Lymphoblastic Leukemia[accessedResource: NCIt:C3183][accessDate: 10-05-2010]
T Cell Leukemia Lymphoma, HTLV I Associated[accessedResource: MSH:D015459][accessDate: 10-05-2010]
NCIt:C3183
T Acute Lymphoblastic Leukemia
Acute T Cell Lymphocytic Leukemia[accessedResource: NCIt:C3183][accessDate: 10-05-2010]
T-Cell Type Acute Leukemia
Precursor T-Lymphoblastic Leukemia[accessedResource: NCIt:C3183][accessDate: 10-05-2010]
Precursor T-cell lymphoblastic leukaemia
Acute lymphoblastic leukemia of T-cell origin. It comprises about 15% of childhood cases and 25% of adult cases. It is more common in males than females. (WHO, 2001)[accessedResource: NCIt:C3183][accessDate: 10-05-2010]
T-Cell Leukemia, Adult
ATLL
Adult T-Cell Leukemia-Lymphomas
T-ALL[accessedResource: NCIt:C3183][accessDate: 10-05-2010]
Acute T-Cell Leukemia
GeneRIF:12970786
T-cell acute lymphoblastic leukaemia[accessedResource: SNOMEDCT:277575008][accessDate: 10-05-2010]
Human T-Cell Leukemia-Lymphomas[accessedResource: MSH:D015459][accessDate: 10-05-2010]
Precursor T Lymphoblastic Leukemia
Human T Cell Leukemia Lymphoma
HTLV-I-Associated T-Cell Leukemia-Lymphomas
Acute T-Cell Leukemia[accessedResource: NCIt:C3183][accessDate: 10-05-2010]
This type of acute lymphoblastic leukemia comprises about 15% of childhood cases and 25% of adult cases. It is more common in males than females. (WHO, 2001)
Precursor T-cell lymphoblastic leukemia
HTLV-Associated Leukemia-Lymphoma[accessedResource: MSH:D015459][accessDate: 10-05-2010]
Human T Lymphotropic Virus Associated Leukemia Lymphoma
T-cell acute lymphoblastic leukemia (disorder)
James Malone
T-cell acute lymphoblastic leukemia (disorder)[accessedResource: DOID:5603][accessDate: 10-05-2010]
T-cell acute lymphoblastic leukaemia
Leukemias, Adult T-Cell
GeneRIF:16326981
Aggressive T-Cell malignancy with adult onset, caused by HUMAN T-LYMPHOTROPIC VIRUS 1. It is endemic in Japan, the Caribbean basin, Southeastern United States, Hawaii, and parts of Central and South America and sub-Saharan Africa.[accessedResource: MSH:D015459][accessDate: 10-05-2010]
T-Cell Leukemia-Lymphomas, HTLV-I-Associated[accessedResource: MSH:D015459][accessDate: 10-05-2010]
GeneRIF:16079893
Adult T-Cell Leukemias[accessedResource: MSH:D015459][accessDate: 10-05-2010]
GeneRIF:16287841
Precursor T-cell lymphoblastic leukaemia[accessedResource: SNOMEDCT:277575008][accessDate: 10-05-2010]
Adult T-Cell Leukemia-Lymphoma[accessedResource: MSH:D015459][accessDate: 10-05-2010]
Leukemia, Adult T-Cell[accessedResource: MSH:D015459][accessDate: 10-05-2010]
DOID:5603
Adult T-Cell Leukemia-Lymphoma
Acute T Cell Lymphocytic Leukemia
HTLV ALL
T-ALL
Leukemia-Lymphomas, Human T-Cell
Acute lymphoblastic leukemia of T-cell origin. It comprises about 15% of childhood cases and 25% of adult cases. It is more common in males than females. (WHO, 2001)
Human T Cell Leukemia Lymphoma[accessedResource: MSH:D015459][accessDate: 10-05-2010]
SNOMEDCT:277575008
HTLV ALL[accessedResource: MSH:D015459][accessDate: 10-05-2010]
Leukemia-Lymphoma, HTLV-I-Associated T-Cell
Leukemia Lymphoma, T Cell, Acute, HTLV I Associated[accessedResource: MSH:D015459][accessDate: 10-05-2010]
Leukemia Lymphoma, T Cell, Acute, HTLV I Associated
T-cell acute lymphoblastic leukemia
Precursor T-cell lymphoblastic leukemia[accessedResource: SNOMEDCT:277575008][accessDate: 10-05-2010]
GeneRIF:15472075
Human T Lymphotropic Virus-Associated Leukemia-Lymphoma[accessedResource: MSH:D015459][accessDate: 10-05-2010]
GeneRIF:11937265
NCIH1975
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158649&type=germplasm
CS57625 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158649&type=germplasm
CS57625
James Malone
true
CNS - Brain - Hippocampus (MMHCC)[accessedResource: NCIt:C22615][accessDate: 10-05-2010]
Hippocampus
Hippocampus[accessedResource: NCIt:C22615][accessDate: 10-05-2010]
CNS - Brain - Hippocampus (MMHCC)
NCIt:C22615
Obsolete - term hippocampus already exists
obsolete_CNS brain hippocampus MMHCC
1.8
true
obsolete_cell factor
James Malone
class no longer needed for organizational purposes. Also hard to decide what an instance of a cell factor is.
http://www.arabidopsis.org/servlets/TairObject?id=1005158872&type=germplasm
CS57848 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158872&type=germplasm
CS57848
James Malone
apoplast[accessedResource: MAT:0000348][accessDate: 10-05-2010]
The fluid between the cell wall and the plasma membrane[accessedResource: MAT:0000348][accessDate: 10-05-2010]
MAT:0000348
apoplast
apoplasm
James Malone
The fluid between the cell wall and the plasma membrane
Natural Language Generator 8th April 2010
Ele Holloway
An ab2.2 is a cell line.
An ab2.2 is both something that derives from a mus musculus, and something that derives from an embryonic stem cell.
AB2.2
James Malone
An embryonic specific part is an organism part which is specific to embryos.
BTO:0000174
James Malone
An anatomical structure that exists only before the organism is fully formed. In mammals, for example, a structure that exists only prior to the birth of the organism. This structure may be normal or abnormal.[accessedResource: BTO:0000174][accessDate: 10-05-2010]
embryonic structure
developmental structure
An anatomical structure that exists only before the organism is fully formed. In mammals, for example, a structure that exists only prior to the birth of the organism. This structure may be normal or abnormal.
http://www.arabidopsis.org/servlets/TairObject?id=1005158573&type=germplasm
CS57549 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158573&type=germplasm
CS57549
James Malone
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311932
CS57511 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311932.
CS57511
James Malone
A role played by a a biological sample in the context of a microarray experiment where the intent is that biological or technical variation is measured.
replicate
James Malone
exposure to cigarette smoke
The act of subjecting someone or something to an influencing experience. E.g. exposure to cigarette smoke
exposure
James Malone
Common Chimpanzee
http://www.ebi.ac.uk/efo/EFO_0002651
Pan troglodytes
James Malone
QG56
James Malone
Ele Holloway
PMID:15356126
C57BL/6 congenically expressing H2g7 mouse strain.
B6.H2_g7
Tomasz Adamusiak
Jie Zheng
MSH:D046152
Stromal Tumors, Gastrointestinal[accessedResource: MSH:D046152][accessDate: 10-05-2010]
GIST
GANT[accessedResource: DOID:9253][accessDate: 10-05-2010]
Stromal tumor of Gastrointestinal tract
DOID:9253
GIST[accessedResource: DOID:9253][accessDate: 10-05-2010]
gastrointestinal stromal tumor
All tumors in the GASTROINTESTINAL TRACT arising from mesenchymal cells (MESODERM) except those of smooth muscle cells (LEIOMYOMA) or Schwann cells (SCHWANNOMA).[accessedResource: MSH:D046152][accessDate: 10-05-2010]
All tumors in the GASTROINTESTINAL TRACT arising from mesenchymal cells (MESODERM) except those of smooth muscle cells (LEIOMYOMA) or Schwann cells (SCHWANNOMA).
Neoplasm, Gastrointestinal Stromal[accessedResource: MSH:D046152][accessDate: 10-05-2010]
Gastrointestinal Stromal Tumors
Stromal Neoplasms, Gastrointestinal[accessedResource: MSH:D046152][accessDate: 10-05-2010]
James Malone
Gastrointestinal Stromal Neoplasms
Gastrointestinal Stromal Neoplasm
Stromal tumor of gastrointestinal tract[accessedResource: DOID:9253][accessDate: 10-05-2010]
GANT
NIFSTD:birnlex_2110
antibodies
Jie Zheng
antibodies[accessedResource: NIFSTD:birnlex_2110][accessDate: 10-05-2010]
antibody
An antibody function (or antigen binding function) is an infection-fighting protein molecule in blood or secretory fluids that tags, neutralizes, and helps destroy pathogenic microorganisms such as bacteria, viruses and toxins.
James Malone
MO_833
Tomasz Adamusiak
GM12057
James Malone
stage II endometrioid carcinoma
James Malone
http://jaxmice.jax.org/strain/009301.html
ILSXISS25/TejJ
Tomasz Adamusiak
Familial amyotrophic lateral sclerosis is a amyotrophic lateral sclerosis in which a family history of the disease exists.
familial amyotrophic lateral sclerosis
James Malone
true
g/m^2
gram per metre squared
gram per square meter
gram per meter squared
James Malone
http://www.ebi.ac.uk/efo/EFO_0001863
CHEBI:37890
alpha-adrenergic receptor blockaders
An agent that binds to but does not activate alpha-adrenergic receptors thereby blocking the actions of endogenous or exogenous alpha-adrenergic agonists. alpha-Adrenergic antagonists are used in the treatment of hypertension, vasospasm, peripheral vascular disease, shock, and pheochromocytoma.
alpha-adrenergic antagonist
alpha-adrenergic blockers
James Malone
alpha-adrenergic antagonists
alpha-adrenoceptor antagonists
alpha-adrenergic blocker
HBL100
James Malone
http://www.ebi.ac.uk/efo/EFO_0002604
drug
647V
James Malone
Ele Holloway
A phytoestrogenic isoflavone with antioxidant properties.
James Malone
Sophoricol
C15H10O5
genistein
A hydroxyisoflavone that has formula C15H10O5.
5,7-dihydroxy-3-(4-hydroxyphenyl)-4H-chromen-4-one
InChIKey=TZBJGXHYKVUXJN-UHFFFAOYAH
http://www.ebi.ac.uk/efo/EFO_0001542
CHEBI:28088
InChI=1/C15H10O5/c16-9-3-1-8(2-4-9)11-7-20-13-6-10(17)5-12(18)14(13)15(11)19/h1-7,16-18H
4',5,7-trihydroxyisoflavone
Oc1ccc(cc1)-c1coc2cc(O)cc(O)c2c1=O
Prunetol
One of the two parietal lobes of the brain located behind the frontal lobe at the top of the brain. Parietal Lobe, Right - Damage to this area can cause visuo-spatial deficits (e.g., the patient may have difficulty finding their way around new, or even familiar, places). Parietal Lobe, Left - Damage to this area may disrupt a patient's ability to understand spoken and/or written language. The parietal lobes contain the primary sensory cortex which controls sensation (touch, pressure). Behind the primary sensory cortex is a large association area that controls fine sensation (judgment of texture, weight, size, shape).[accessedResource: BTO:0001355][accessDate: 10-05-2010]
temporal cortex[accessedResource: BTO:0001355][accessDate: 10-05-2010]
James Malone
BTO:0001355
Temporal lobe is the ventrolateral lobe of five lobes comprising each cerebral hemisphere. It is bounded dorsally by the lateral fissure and posteriorly by an arbitrary border shared with the occipital lobe.
MAT:0000508
temporal lobe
One of the two parietal lobes of the brain located behind the frontal lobe at the top of the brain. Parietal Lobe, Right - Damage to this area can cause visuo-spatial deficits (e.g., the patient may have difficulty finding their way around new, or even familiar, places). Parietal Lobe, Left - Damage to this area may disrupt a patient's ability to understand spoken and/or written language. The parietal lobes contain the primary sensory cortex which controls sensation (touch, pressure). Behind the primary sensory cortex is a large association area that controls fine sensation (judgment of texture, weight, size, shape).
Temporal cortex
Temporal lobe is the ventrolateral lobe of five lobes comprising each cerebral hemisphere. It is bounded dorsally by the lateral fissure and posteriorly by an arbitrary border shared with the occipital lobe.[accessedResource: FMAID:61825][accessDate: 10-05-2010]
EMAPA:18797
FMAID:61825
EV:0100169
ZFS:0000037
larval day 5
James Malone
GM12146
James Malone
NIFSTD:nifext_171
Tomasz Adamusiak
Mural Cell
pericyte
CL:0000184
Rouget Cell
A slender, contractile, mesenchymal-like cell found in close association with capillary walls. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells. (From Stedman, 26th ed).
Rouget Cell[accessedResource: NIFSTD:nifext_171][accessDate: 10-05-2010]
*Slender, contractile, mesenchymal-like cell found in close association with capillary walls. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells. (From OBO Cell Type Ontology).
*A flattened, or elongated, stellate-shaped solitary cell with multiple cytoplasmic processes encircling the capillary endothelium and contacting a large abluminal vessel area. It may be equivalent to the vascular smooth muscle cell, although this identify has not been conclusively determined yet (Armulik et al., Circ Res 97: 512, 2005).
*Slender, contractile, mesenchymal-like cell found in close association with capillary walls. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells. (From OBO Cell Type Ontology).
*A flattened, or elongated, stellate-shaped solitary cell with multiple cytoplasmic processes encircling the capillary endothelium and contacting a large abluminal vessel area. It may be equivalent to the vascular smooth muscle cell, although this identify has not been conclusively determined yet (Armulik et al., Circ Res 97: 512, 2005).[accessedResource: NIFSTD:nifext_171][accessDate: 10-05-2010]
A slender, contractile, mesenchymal-like cell found in close association with capillary walls. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells. (From Stedman, 26th ed).[accessedResource: CL:0000184][accessDate: 10-05-2010]
Mural Cell[accessedResource: NIFSTD:nifext_171][accessDate: 10-05-2010]
Tomasz Adamusiak
N-Methyl-formamide
A formamide compound having an N-methyl substituent.
[H]C(=O)NC
HCONHCH3
C2H5NO
CHEBI:7438
InChIKey=ATHHXGZTWNVVOU-TULZNQERCH
Methylformamide
Monomethylformamide
N-methylformamide
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0002732
N-Monomethylformamide
InChI=1/C2H5NO/c1-3-2-4/h2H,1H3,(H,3,4)/f/h3H
NMF
MAT:0000221
PO:0006308
ZEA:0015158
James Malone
lateral root meristem
OntologyMappingImporter following MAT:0000221
A derived unit which represents a standard measurement of how much of a given substance there is mixed with another substance.
concentration unit
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001803
MO_61
A concentration unit is a dervied unit which represents a standard measurement of how much of a given substance there is mixed with another substance.
Jie Zheng
James Malone
MO_86
true
http://www.ebi.ac.uk/efo/EFO_0001888
CHEBI:50504
Compound that increase urine volume by increasing the amount of osmotically active solute in the urine. It also increases the osmolarity of plasma.
osmotic diuretic
James Malone
http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
129/Sv is a substrain of the mouse strain 129 as described in Jackson Laboratory http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
129/Sv
James Malone
Carcinoma, predominantly squamous cell, arising from epithelial cells of the hypopharynx
carcinoma of the hypopharynx
cancer of Hypopharynx
hypopharyngeal carcinoma
A normal pancreas cell line.
KIF5
James Malone
Ele Holloway
MO_832
clinical history design
Tomasz Adamusiak
MO_490
self vs self design
Tomasz Adamusiak
C15H20O4
CC(\\C=C\\C1(O)C(C)=CC(=O)CC1(C)C)=C\\C(O)=O
InChIKey=JLIDBLDQVAYHNE-RGWLVKBGDZ
An apo carotenoid sesquiterpenoid that has formula C15H20O4.
CHEBI:22152
InChI=1/C15H20O4/c1-10(7-13(17)18)5-6-15(19)11(2)8-12(16)9-14(15,3)4/h5-8,19H,9H2,1-4H3,(H,17,18)/b6-5+,10-7-/f/h17H
Abscisinsaeure
acide abscissique
Abszisinsaeure
acido abscisico
(2Z,4E)-5-(1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl)-3-methylpenta-2,4-dienoic acid
abscisic acid
http://www.ebi.ac.uk/efo/EFO_0001477
http://jaxmice.jax.org/strain/009257.html
ILSXISS3/TejJ
Tomasz Adamusiak
experimental cell is a cell which is experimentally derived such as a cell line cell, or a cell differentiated in culture
experimental cell
Helen Parkinson
ll[accessedResource: ZFA:0000034][accessDate: 10-05-2010]
ll
TAO:0000282
XAO:0000095
James Malone
A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.)[accessedResource: ZFA:0000034][accessDate: 10-05-2010]
a line of neuroblasts along the sides of fish and amphibia that detect vibrations and pressure changes
sensory systems[accessedResource: TAO:0000282][accessDate: 10-05-2010]
sensory system[accessedResource: TAO:0000282][accessDate: 10-05-2010]
ZFA:0000034
MAT:0000249
sensory systems
sensory system
a line of neuroblasts along the sides of fish and amphibia that detect vibrations and pressure changes[accessedResource: MAT:0000249][accessDate: 10-05-2010]
A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.)
MFO:0003620
AAO:0000269
lateral line system
true
UO:0000036
http://www.ebi.ac.uk/efo/EFO_0001725
A year is a derived time unit which is equal to 365.25 days.
A time unit which is equal to 12 months which is science is taken to be equal to 365.25 days.
year
James Malone
James Malone
HCC1187
true
UO:0000004
http://www.ebi.ac.uk/efo/EFO_0001681
An electric current unit is a base unit which is a standard measure of the flow of electric charge.
A base unit which is a standard measure of the flow of electric charge.
electric current unit
James Malone
U937
James Malone
umbilical cord blood
Cord Blood[accessedResource: NCIt:C13300][accessDate: 10-05-2010]
James Malone
Blood present in the umbilical vessels at the time of delivery. If cryopreserved at birth, cord blood can serve as a source of autologous lymphocytes for transplantation to a patient later diagnosed and treated for leukemia or lymphoma.
NCIt:C13300
Cord Blood
Blood present in the umbilical vessels at the time of delivery. If cryopreserved at birth, cord blood can serve as a source of autologous lymphocytes for transplantation to a patient later diagnosed and treated for leukemia or lymphoma.[accessedResource: NCIt:C13300][accessDate: 10-05-2010]
NCIt:C8851
DLBCL
Tomasz Adamusiak
DLBCL[accessedResource: NCIt:C8851][accessDate: 10-05-2010]
A non-Hodgkin lymphoma characterized by a diffuse proliferation of predominantly large neoplastic B lymphocytes. It is the most frequently seen type of non-Hodgkin lymphoma, representing 30%-40% of the cases. Morphologic variants include centroblastic lymphoma, immunoblastic lymphoma, and anaplastic lymphoma. Subtypes/entities include T-cell/histiocyte rich large B-cell lymphoma, primary diffuse large B-cell lymphoma of the central nervous system, plasmablastic lymphoma, primary cutaneous diffuse large B-cell lymphoma, leg type, and ALK-positive large B-cell lymphoma.[accessedResource: NCIt:C8851][accessDate: 10-05-2010]
A non-Hodgkin lymphoma characterized by a diffuse proliferation of predominantly large neoplastic B lymphocytes. It is the most frequently seen type of non-Hodgkin lymphoma, representing 30%-40% of the cases. Morphologic variants include centroblastic lymphoma, immunoblastic lymphoma, and anaplastic lymphoma. Subtypes/entities include T-cell/histiocyte rich large B-cell lymphoma, primary diffuse large B-cell lymphoma of the central nervous system, plasmablastic lymphoma, primary cutaneous diffuse large B-cell lymphoma, leg type, and ALK-positive large B-cell lymphoma.
diffuse large B-cell lymphoma
Mouse, C57BL/6, T-lymphocyte cell line.
Ele Holloway
CTLL-2
Mouse, C57BL/6, T-lymphocyte cell line.[accessedResource: BTO:0001482][accessDate: 10-05-2010]
BTO:0001482
James Malone
PUBMED ID: 15015938
129xC57BL/6 is a substrain of the mouse strain 129 as described in article PUBMED ID 15015938
129xC57BL/6
James Malone
InChIKey=LNAZSHAWQACDHT-XIYTZBAFBM
Methylcellulosum
Cellulose methylate
cellulose methyl ether
CHEBI:53448
Tomasz Adamusiak
A (1->4)-beta-D-glucan compound formed by methylating cellulose through exposure to NaOH/CH3Cl.
Metilcelulosa
Methylcellulose
methylated cellulose
InChI=1/C29H54O16/c1-30-12-15-18(33-4)21(34-5)25(38-9)28(42-15)45-20-17(14-32-3)43-29(26(39-10)23(20)36-7)44-19-16(13-31-2)41-27(40-11)24(37-8)22(19)35-6/h15-29H,12-14H2,1-11H3/t15-,16-,17-,18-,19-,20-,21+,22+,23+,24-,25-,26-,27-,28+,29+/m1/s1
E461
http://www.ebi.ac.uk/efo/EFO_0002735
(C9H16O5)n
methyl cellulose
Ele Holloway
NCIH2405
James Malone
Ele Holloway
Brown Adipose Tissue[accessedResource: NCIt:C22704][accessDate: 10-05-2010]
MA:0000057
James Malone
Adipose Tissue - Brown (MMHCC)
BTO:0000156
Brown Adipose Tissue
A mammalian heat-producing tissue occurring especially in human newborns and in hibernators.[accessedResource: BTO:0000156][accessDate: 10-05-2010]
MAT:0000198
NCIt:C22704
Adipose Tissue - Brown (MMHCC)[accessedResource: NCIt:C22704][accessDate: 10-05-2010]
brown fat
A mammalian heat-producing tissue occurring especially in human newborns and in hibernators.
Ancient neurilemoma
NCIt:C3269
GeneRIF:12444102
Neurilemoma (morphologic abnormality)[accessedResource: SNOMEDCT:985004][accessDate: 10-05-2010]
Neurinoma
Pigmented Schawnnoma[accessedResource: SNOMEDCT:985004][accessDate: 10-05-2010]
Ancient Neurilemmoma[accessedResource: NCIt:C6556][accessDate: 10-05-2010]
SNOMEDCT:985004
A neoplasm that arises from SCHWANN CELLS of the cranial, peripheral, and autonomic nerves. Clinically, these tumors may present as a cranial neuropathy, abdominal or soft tissue mass, intracranial lesion, or with spinal cord compression. Histologically, these tumors are encapsulated, highly vascular, and composed of a homogenous pattern of biphasic fusiform-shaped cells that may have a palisaded appearance (MeSH).[accessedResource: NIFSTD:birnlex_12603][accessDate: 10-05-2010]
Ancient Schwannoma
NCIt:C6556
Ancient neurilemmoma (disorder)
Psammomatous schwannoma
Plexiform Schwannomatoses
Pigmented Schawnnoma
Neurilemmoma (disorder)[accessedResource: SNOMEDCT:404022001][accessDate: 10-05-2010]
Neurilemoma
SNOMEDCT:409704009
Neurilemomas
Neurilemmomas
Malignant Neurilemoma[accessedResource: MSH:D009442][accessDate: 10-05-2010]
Neurilemomas[accessedResource: MSH:D009442][accessDate: 10-05-2010]
Neurilemmosarcoma
Schwannoma, NOS
Neurilemmosarcomas[accessedResource: MSH:D009442][accessDate: 10-05-2010]
Acoustic neuroma
Neurinoma[accessedResource: SNOMEDCT:985004][accessDate: 10-05-2010]
A tumor of the peripheral nervous system composed of neoplastic Schwann cells. The vast majority of schwannomas follow a benign clinical course. Only rare cases associated with a malignant clinical course have been reported.[accessedResource: NCIt:C3269][accessDate: 10-05-2010]
Plexiform schwannoma
Degenerated Neurilemmoma
GeneRIF:15837555
GeneRIF:14566860
Schwannomatosis, Plexiform
A neoplasm that arises from SCHWANN CELLS of the cranial, peripheral, and autonomic nerves. Clinically, these tumors may present as a cranial neuropathy, abdominal or soft tissue mass, intracranial lesion, or with spinal cord compression. Histologically, these tumors are encapsulated, highly vascular, and composed of a homogenous pattern of biphasic fusiform-shaped cells that may have a palisaded appearance (MeSH).
Schwannomas[accessedResource: MSH:D009442][accessDate: 10-05-2010]
Cellular schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 10-05-2010]
Neurilemmoma, NOS[accessedResource: SNOMEDCT:985004][accessDate: 10-05-2010]
Neurilemmoma
Neurilemmoma[accessedResource: SNOMEDCT:404022001][accessDate: 10-05-2010]
Plexiform Schwannomatoses[accessedResource: MSH:D009442][accessDate: 10-05-2010]
Melanocytic Schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 10-05-2010]
SNOMEDCT:404023006
Schwannoma, NOS[accessedResource: SNOMEDCT:985004][accessDate: 10-05-2010]
Ancient neurilemoma[accessedResource: SNOMEDCT:409704009][accessDate: 10-05-2010]
GeneRIF:13679444
NIFSTD:birnlex_12603
MSH:D009442
Neurilemoma (morphologic abnormality)
Neurilemmosarcomas
A neoplasm that arises from SCHWANN CELLS of the cranial, peripheral, and autonomic nerves. Clinically, these tumors may present as a cranial neuropathy, abdominal or soft tissue mass, intracranial lesion, or with spinal cord compression. Histologically, these tumors are encapsulated, highly vascular, and composed of a homogenous pattern of biphasic fusiform-shaped cells that may have a palisaded appearance. (From DeVita Jr et al., Cancer: Principles and Practice of Oncology, 5th ed, pp964-5)[accessedResource: MSH:D009442][accessDate: 10-05-2010]
A neoplasm that arises from SCHWANN CELLS of the cranial, peripheral, and autonomic nerves. Clinically, these tumors may present as a cranial neuropathy, abdominal or soft tissue mass, intracranial lesion, or with spinal cord compression. Histologically, these tumors are encapsulated, highly vascular, and composed of a homogenous pattern of biphasic fusiform-shaped cells that may have a palisaded appearance. (From DeVita Jr et al., Cancer: Principles and Practice of Oncology, 5th ed, pp964-5)
Neurilemmosarcoma[accessedResource: NIFSTD:birnlex_12603][accessDate: 10-05-2010]
A tumor of the peripheral nervous system composed of neoplastic Schwann cells. The vast majority of schwannomas follow a benign clinical course. Only rare cases associated with a malignant clinical course have been reported.
Malignant Neurilemoma
GeneRIF:15850583
GeneRIF:12665675
Ancient neurilemmoma (disorder)[accessedResource: SNOMEDCT:404023006][accessDate: 10-05-2010]
Neurilemoma[accessedResource: NIFSTD:birnlex_12603][accessDate: 10-05-2010]
Ancient schwannoma (morphologic abnormality)
GeneRIF:12118253
schwannoma
Degenerated Schwannoma
Ancient Neurilemmoma
Schwannomas
Melanotic schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 10-05-2010]
Pigmented schwannoma
Neurilemmomas[accessedResource: MSH:D009442][accessDate: 10-05-2010]
Melanotic schwannoma
Neurilemmoma, NOS
Malignant Neurilemomas
Ancient schwannoma (morphologic abnormality)[accessedResource: SNOMEDCT:409704009][accessDate: 10-05-2010]
DOID:3192
Plexiform schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 10-05-2010]
Plexiform Schwannomatosis[accessedResource: MSH:D009442][accessDate: 10-05-2010]
Neurilemmoma (disorder)
Neurinomas
Psammomatous schwannoma[accessedResource: DOID:3192][accessDate: 10-05-2010]
James Malone
GeneRIF:14612918
Degenerated Neurilemmoma[accessedResource: NCIt:C6556][accessDate: 10-05-2010]
Degenerated Schwannoma[accessedResource: NCIt:C6556][accessDate: 10-05-2010]
Melanocytic Schwannoma
Ancient schwannoma[accessedResource: SNOMEDCT:409704009][accessDate: 10-05-2010]
Tomasz Adamusiak
Neurilemomas, Malignant[accessedResource: MSH:D009442][accessDate: 10-05-2010]
Acoustic neuroma[accessedResource: SNOMEDCT:985004][accessDate: 10-05-2010]
SNOMEDCT:404022001
Pigmented schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 10-05-2010]
Cellular schwannoma
Neurinomas[accessedResource: MSH:D009442][accessDate: 10-05-2010]
A SCN2.2 is a cell line.
A SCN2.2 is both something that derives from a rattus norvegicus, and something that derives from a
suprachiasmatic nucleus.
SCN2.2
Natural Language Generator 8th April 2010
James Malone
Ele Holloway
BTO:0001408
locus caeruleus[accessedResource: BTO:0001408][accessDate: 10-05-2010]
locus cinereus[accessedResource: BTO:0001408][accessDate: 10-05-2010]
locus caeruleus
locus coeruleus
locus ceruleus
James Malone
locus cinereus
locus ceruleus[accessedResource: BTO:0001408][accessDate: 10-05-2010]
An aldopentose, found in the embryos of most edible plants and used in medicine to test for malabsorption by administration in water to the patient.
InChI=1/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h1,3-5,7-10H,2H2/t3-,4+,5+/m0/s1
InChIKey=PYMYPHUHKUWMLA-VPENINKCBR
OC[C@@H](O)[C@H](O)[C@@H](O)C=O
CHEBI:18222
xylose
C5H10O5
xylo-pentose
Xyl
http://www.ebi.ac.uk/efo/EFO_0002681
http://en.wikipedia.org/wiki/Pancreas
progenitor cell of endocrine pancreas
Tomasz Adamusiak
Jie Zheng
SNU5
James Malone
Ele Holloway
GM12716
James Malone
NCIt:C53482
An acute viral infection of the respiratory tract, occurring in isolated cases, in epidemics, or in pandemics; it is caused by serologically different strains of viruses (influenzaviruses) designated A, B, and C, has a 3-day incubation period, and usually lasts for 3 to 10 days. It is marked by inflammation of the nasal mucosa, pharynx, and conjunctiva; headache; myalgia; often fever, chills, and prostration; and occasionally involvement of the myocardium or central nervous system.
An acute viral infection of the respiratory tract, occurring in isolated cases, in epidemics, or in pandemics; it is caused by serologically different strains of viruses (influenzaviruses) designated A, B, and C, has a 3-day incubation period, and usually lasts for 3 to 10 days. It is marked by inflammation of the nasal mucosa, pharynx, and conjunctiva; headache; myalgia; often fever, chills, and prostration; and occasionally involvement of the myocardium or central nervous system.[accessedResource: NCIt:C53482][accessDate: 10-05-2010]
influenza
James Malone
EMAPA:17528
A cellular, multilayered epithelium derived from the ectoderm. Zebrafish epidermis consists only of living cells unlike terrestrial vertebrates in which dead, keratinized cells are present.
EV:0100153
A cellular, multilayered epithelium derived from the ectoderm. Zebrafish epidermis consists only of living cells unlike terrestrial vertebrates in which dead, keratinized cells are present.[accessedResource: ZFA:0000105][accessDate: 10-05-2010]
FBbt:00005401
AAO:0000143
James Malone
SAEL:35
hypodermis
FMAID:70596
MAT:0000154
TADS:0000109
The outer epithelial layer of the external integument of the animal body that is derived from the embryonic epiblast; specifically: the outer nonsensitive and nonvascular layer of the skin of a vertebrate that overlies the dermis.[accessedResource: BTO:0000404][accessDate: 10-05-2010]
hypodermis[accessedResource: MAT:0000154][accessDate: 10-05-2010]
The outer epithelial layer of the external integument of the animal body that is derived from the embryonic epiblast; specifically: the outer nonsensitive and nonvascular layer of the skin of a vertebrate that overlies the dermis.
MA:0000153
BTO:0000404
ZFA:0000105
epidermis
WBbt:0005733
http://www.arabidopsis.org/servlets/TairObject?id=1005158755&type=germplasm
CS57731 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158755&type=germplasm
CS57731
James Malone
http://jaxmice.jax.org/strain/009280.html
ILSXISS86/TejJ
Tomasz Adamusiak
benign insulitis
James Malone
Ele Holloway
primary cells
NCIH1395
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0001829
CHEBI:26158
phytohormone
James Malone
MO_497
http://www.ebi.ac.uk/efo/EFO_0002020
An instrument which is used to maintain the temperature of one or more hybridization_chamber(s) at a defined, constant temperature.
hybridization station
James Malone
MDAMB175VII
James Malone
James Malone
SMC cell
smooth muscle cell[accessedResource: BTO:0001260][accessDate: 10-05-2010]
smooth muscle
smooth muscle cell
MAT:0000303
Muscle tissue that lacks cross striations, that is made up of elongated spindle-shaped cells having a central nucleus, and that is found in vertebrate visceral structures (as the stomach and bladder) as thin sheets performing functions not subject to conscious control by the mind and in all or most of the musculature of invertebrates other than arthropods.
SMC cell[accessedResource: BTO:0001260][accessDate: 10-05-2010]
Muscle tissue that lacks cross striations, that is made up of elongated spindle-shaped cells having a central nucleus, and that is found in vertebrate visceral structures (as the stomach and bladder) as thin sheets performing functions not subject to conscious control by the mind and in all or most of the musculature of invertebrates other than arthropods.[accessedResource: BTO:0001260][accessDate: 10-05-2010]
FBbt:00003525
adult visceral muscle[accessedResource: MAT:0000303][accessDate: 10-05-2010]
adult visceral muscle
EV:0100378
SAEL:97
BTO:0001260
XAO:0000175
Knock in expression is a process in which a gene is replaced by an altered version of the same gene using homologous recombination resulting in a gain of function.
knock in expression
James Malone
P3HR1
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158928&type=germplasm
CS57904 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158928&type=germplasm
CS57904
James Malone
SW982
James Malone
Ele Holloway
2.1
true
obsolete_GM12892
James Malone
duplicate with EFO_0002786
BJABK3
James Malone
EV:0100377
James Malone
skeletal muscle
MAT:0000302
adult somatic muscle[accessedResource: MAT:0000302][accessDate: 10-05-2010]
A usually voluntary muscle made up of elongated, multinucleated, transversely striated muscle fibers, having principally bony attachments.
adult somatic muscle
FMAID:5022
Nonparenchymatous organ that primarily consists of skeletal muscle tissue aggregated into macroscopic fasciculi by connective tissue; together with other muscles, it constitutes the muscular system. Examples: biceps, diaphragm, masseter, right third external intercostal muscle, external oblique, levator ani, serratus anterior.[accessedResource: FMAID:5022][accessDate: 10-05-2010]
skeletal muscle system[accessedResource: MAT:0000302][accessDate: 10-05-2010]
skeletal muscle cell
muscle organ - human[accessedResource: MAT:0000302][accessDate: 10-05-2010]
striated muscle
XAO:0000174
muscle organ - human
skeletal muscle system
A usually voluntary muscle made up of elongated, multinucleated, transversely striated muscle fibers, having principally bony attachments.[accessedResource: BTO:0001103][accessDate: 10-05-2010]
EMAPA:17745
BFBbt:00003259
SAEL:94
Nonparenchymatous organ that primarily consists of skeletal muscle tissue aggregated into macroscopic fasciculi by connective tissue; together with other muscles, it constitutes the muscular system. Examples: biceps, diaphragm, masseter, right third external intercostal muscle, external oblique, levator ani, serratus anterior.
EHDAA:5031
skeletal muscle cell[accessedResource: BTO:0001103][accessDate: 10-05-2010]
striated muscle[accessedResource: BTO:0001103][accessDate: 10-05-2010]
BTO:0001103
hypophysis[accessedResource: BTO:0001073][accessDate: 10-05-2010]
pituitary gland
MA:0000127
A small oval endocrine organ that is attached to the infundibulum of the brain, consists of an epithelial anterior lobe joined by an intermediate part to a posterior lobe of nervous origin, and produces various internal secretions directly or indirectly impinging on most basic body functions.[accessedResource: BTO:0001073][accessDate: 10-05-2010]
James Malone
pituitary gland[accessedResource: BTO:0001073][accessDate: 10-05-2010]
FMAID:13889
A compound organ which is an endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin.[accessedResource: ZFA:0000118][accessDate: 10-05-2010]
Hypophysis cerebri
XAO:0000161
hypophysis
A compound organ which is an endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin.
EMAPA:16724
A small oval endocrine organ that is attached to the infundibulum of the brain, consists of an epithelial anterior lobe joined by an intermediate part to a posterior lobe of nervous origin, and produces various internal secretions directly or indirectly impinging on most basic body functions.
Hypophysis cerebri[accessedResource: FMAID:13889][accessDate: 10-05-2010]
MAT:0000077
pituitary body
BTO:0001073
SAEL:83
EV:0100132
pituitary body[accessedResource: BTO:0001073][accessDate: 10-05-2010]
ZFA:0000118
pituitary
EHDAA:2183
ICD9:691.8
OTHER ATOPIC DERMATITIS[accessedResource: ICD9:691.8][accessDate: 10-05-2010]
James Malone
atopic eczema
Atopic dermatitis and related conditions[accessedResource: SNOMEDCT:200769008][accessDate: 10-05-2010]
Other atopic dermatitis and related conditions[accessedResource: ICD9:691.8][accessDate: 10-05-2010]
OTHER ATOPIC DERMATITIS
DOID:2771
SNOMEDCT:200769008
Other atopic dermatitis and related conditions
ICD9:691
Atopic dermatitis and related conditions (disorder)
Atopic dermatitis and related conditions
Atopic dermatitis and related conditions (disorder)[accessedResource: SNOMEDCT:200769008][accessDate: 10-05-2010]
James Malone
A milligram is a mass unit which is equal to one-millionth of a kilogram.
MO_949
milligram
A mass unit which is equal to one thousandth of a gram or 10^[-3] g.
Jie Zheng
true
Tomasz Adamusiak
mg
http://www.ebi.ac.uk/efo/EFO_0001706
B140P
James Malone
Ele Holloway
vulvar carcinoma
http://www.arabidopsis.org/servlets/TairObject?id=1005158866&type=germplasm
CS57842 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158866&type=germplasm
CS57842
James Malone
EB1
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158723&type=germplasm
CS57699 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158723&type=germplasm
CS57699
James Malone
SR
James Malone
Ele Holloway
MO_184
Tests and results for pathogens infecting organism from which the biosource is derived
pathogen test
Tomasz Adamusiak
Jie Zheng
birn_anat:nlx_anat_20090306
FMAID:77383
nucleus accumbens core
Tomasz Adamusiak
BTO:0001188
MAT:0000005
GRO:0005338[accessedResource: BTO:0001188][accessDate: 10-05-2010]
PO:0009005
root
The usually underground part of a seed plant body that originates usually from the hypocotyl, functions as an organ of absorption, aeration, and food storage or as a means of anchorage and support, and differs from a stem especially in lacking nodes, buds, and leaves.
The usually underground part of a seed plant body that originates usually from the hypocotyl, functions as an organ of absorption, aeration, and food storage or as a means of anchorage and support, and differs from a stem especially in lacking nodes, buds, and leaves.[accessedResource: BTO:0001188][accessDate: 10-05-2010]
James Malone
GRO:0005338
ZEA:0015034
SNOMEDCT:2492009
Nutritional Disorders[accessedResource: MSH:D009748][accessDate: 10-05-2010]
NUTRITION DIS
NUTRITION DIS[accessedResource: MSH:D009748][accessDate: 10-05-2010]
James Malone
Nutritional disorder (disorder)[accessedResource: DOID:374][accessDate: 10-05-2010]
Nutritional disease
NCIt:C26836
Nutritional disorder, NOS[accessedResource: SNOMEDCT:2492009][accessDate: 10-05-2010]
Nutritional Disorders
Malnutrition[accessedResource: SNOMEDCT:2492009][accessDate: 10-05-2010]
Nutrition Disorders[accessedResource: MSH:D009748][accessDate: 10-05-2010]
NUTRITIONAL DIS
Disorders caused by nutritional imbalance, either overnutrition or undernutrition.
Nutritional disorder, NOS
Nutritional disease, NOS
MSH:D009748
Disorders caused by nutritional imbalance, either overnutrition or undernutrition.[accessedResource: MSH:D009748][accessDate: 10-05-2010]
Nutritional disorder (disorder)
nutritional disorder
Nutrition disorder
NUTRITIONAL DIS[accessedResource: MSH:D009748][accessDate: 10-05-2010]
Nutritional disease[accessedResource: SNOMEDCT:2492009][accessDate: 10-05-2010]
disorder of nutrition
DOID:374
Disorder of nutrition[accessedResource: SNOMEDCT:2492009][accessDate: 10-05-2010]
Nutrition Disorders
Malnutrition
Nutritional disease, NOS[accessedResource: SNOMEDCT:2492009][accessDate: 10-05-2010]
Nutrition Disorder[accessedResource: MSH:D009748][accessDate: 10-05-2010]
First segment of right coronary artery[accessedResource: FMAID:3804][accessDate: 10-05-2010]
proximal portion of right coronary artery
Anterior segment of right coronary artery[accessedResource: FMAID:3804][accessDate: 10-05-2010]
Jie Zheng
FMAID:3804
Tomasz Adamusiak
Anterior segment of right coronary artery
First segment of right coronary artery
Helen Parkinson
fibrocystic breast disease
diffuse cystic mastopathy
fibrocystic disease of breast
breast fibrocystic disease is a benign mammary displasia characterised by breast discomfort and 'lumpiness'
breast fibrocystic disease
one-cell stage
Small but distinctive epithelial sac containing fluid, located midventrally posterior to the yolk cell or its extension, and transiently present during most of the segmentation period. Kupffer's vesicle has been compared to the mouse embryonic node.[accessedResource: ZFA:0000001][accessDate: 10-05-2010]
MAT:0000074
zygote[accessedResource: MAT:0000074][accessDate: 10-05-2010]
EMAPA:16033
XAO:0000035
FBdv:00005288
ZFA:0000001
Small but distinctive epithelial sac containing fluid, located midventrally posterior to the yolk cell or its extension, and transiently present during most of the segmentation period. Kupffer's vesicle has been compared to the mouse embryonic node.
zygote
EHDAA:27
ZFS:0000001
one-cell stage[accessedResource: MAT:0000074][accessDate: 10-05-2010]
James Malone
EVM:2990001
MFO:0005280
fertilized egg stage
saline
HDMYZ
James Malone
Ele Holloway
birnlex_7062
Theiler stage 11
Tomasz Adamusiak
Jie Zheng
GeneRIF:14566823
Colonic carcinoma[accessedResource: DOID:1520][accessDate: 10-05-2010]
colon carcinoma
NCIt:C4910
GeneRIF:12517779
GeneRIF:15655830
GeneRIF:11731434
GeneRIF:15637741
GeneRIF:12149254
GeneRIF:12515621
GeneRIF:11819805
GeneRIF:16164044
GeneRIF:12847090
GeneRIF:12466967
Colon Cancer
Colonic carcinoma
GeneRIF:12427560
Carcinoma of colon[accessedResource: SNOMEDCT:269533000][accessDate: 10-05-2010]
DOID:1520
GeneRIF:16199102
GeneRIF:12189558
Colon Cancer[accessedResource: NCIt:C4910][accessDate: 10-05-2010]
GeneRIF:14691449
GeneRIF:12055189
GeneRIF:12090473
GeneRIF:12664617
GeneRIF:15559761
Carcinoma of the Colon[accessedResource: NCIt:C4910][accessDate: 10-05-2010]
carcinoma of colon (disorder)
GeneRIF:15454490
GeneRIF:15750621
GeneRIF:12151344
GeneRIF:11920461
GeneRIF:12820726
GeneRIF:12209584
GeneRIF:15259074
Carcinoma of the Colon
GeneRIF:16278666
GeneRIF:14500642
GeneRIF:15688023
GeneRIF:14581351
James Malone
GeneRIF:15492751
A malignant tumor usually arising from the epithelium lining the large intestinal mucosa. Colon carcinoma is one of the most common malignancies in both males and females, and is especially common in North America and Europe. Grossly, most colon carcinomas are polypoid or ulcerating lesions. Microscopically, adenocarcinoma is the most frequently seen morphologic subtype. Prognosis depends on the stage of the disease (depth of invasion, metastasis to regional/distal lymph nodes or other anatomic sites). -- 2004[accessedResource: NCIt:C4910][accessDate: 10-05-2010]
GeneRIF:14533006
GeneRIF:15942645
GeneRIF:14707484
GeneRIF:16192633
GeneRIF:12957362
GeneRIF:12030384
Carcinoma of colon
GeneRIF:12670495
GeneRIF:15480430
A malignant tumor usually arising from the epithelium lining the large intestinal mucosa. Colon carcinoma is one of the most common malignancies in both males and females, and is especially common in North America and Europe. Grossly, most colon carcinomas are polypoid or ulcerating lesions. Microscopically, adenocarcinoma is the most frequently seen morphologic subtype. Prognosis depends on the stage of the disease (depth of invasion, metastasis to regional/distal lymph nodes or other anatomic sites). -- 2004
GeneRIF:12697807
SNOMEDCT:269533000
GeneRIF:12210751
GeneRIF:12185585
GeneRIF:15632146
GeneRIF:14715257
carcinoma of colon (disorder)[accessedResource: DOID:1520][accessDate: 10-05-2010]
C4I
James Malone
Ele Holloway
NCI Metathesaurus: C0038445
stria vascularis
stria vascularis ductus cochlearis
vascular stria of cochlear duct[accessedResource: BTO:0001819][accessDate: 10-05-2010]
NIFSTD:birnlex_2525
A stria vascularis is part of a cochlea and is the upper part of the spiral ligament of thescala media that contains numerous small blood vessels.
Tomasz Adamusiak
stria vascularis ductus cochlearis[accessedResource: BTO:0001819][accessDate: 10-05-2010]
The upper part of the spiral ligament of the scala media that contains numerous small blood vessels;nA layer of vascular tissue consisting of epithelial cells, mesothelial cells, and probably some neuroectoderm; it covers the outer wall of the cochlear duct and is thought to secrete the endolymph.[accessedResource: BTO:0001819][accessDate: 10-05-2010]
vascular stria of cochlear duct
BTO:0001819
James Malone
The upper part of the spiral ligament of the scala media that contains numerous small blood vessels;nA layer of vascular tissue consisting of epithelial cells, mesothelial cells, and probably some neuroectoderm; it covers the outer wall of the cochlear duct and is thought to secrete the endolymph.
GeneRIF:15292466
GeneRIF:14713387
GeneRIF:15070960
GeneRIF:15111497
GeneRIF:12882938
GeneRIF:16204364
GeneRIF:15448103
GeneRIF:15472174
GeneRIF:14742836
GeneRIF:12436346
GeneRIF:16005429
GeneRIF:15340111
GeneRIF:15919838
GeneRIF:12037740
GeneRIF:15936463
GeneRIF:14642613
GeneRIF:13129857
GeneRIF:12393670
GeneRIF:15979049
GeneRIF:12466947
GeneRIF:15845877
GeneRIF:12401709
GeneRIF:15841306
GeneRIF:15978107
GeneRIF:16167150
GeneRIF:11739396
GeneRIF:15897474
GeneRIF:12086965
GeneRIF:15635487
GeneRIF:11896485
GeneRIF:12429884
GeneRIF:15806395
GeneRIF:11816701
GeneRIF:15616040
GeneRIF:15780823
GeneRIF:12720538
GeneRIF:12424252
GeneRIF:15070774
GeneRIF:15472203
GeneRIF:15323067
GeneRIF:12529499
GeneRIF:16123197
GeneRIF:15281018
An eating-related disorder in which excess body fat has accumulated to such an extent that health may be negatively affected. It is commonly defined as a body mass index (weight divided by height squared) of 30 kg/m2 or higher.[accessedResource: NIFSTD:nlx_dys_20090302][accessDate: 10-05-2010]
GeneRIF:15126243
GeneRIF:12399252
GeneRIF:15889232
GeneRIF:9205417
ICD9:278.00
GeneRIF:14504270
GeneRIF:15867334
GeneRIF:12805399
GeneRIF:15009470
GeneRIF:12488352
GeneRIF:12634434
GeneRIF:12429880
GeneRIF:15076153
GeneRIF:15946750
GeneRIF:14602788
GeneRIF:15806598
GeneRIF:12597523
GeneRIF:16030156
GeneRIF:15367397
GeneRIF:12856128
GeneRIF:12660878
GeneRIF:12045256
GeneRIF:12869354
GeneRIF:15942768
GeneRIF:12193546
GeneRIF:12658019
GeneRIF:15254878
GeneRIF:15601967
GeneRIF:15369797
GeneRIF:14525909
GeneRIF:16092047
GeneRIF:12375583
GeneRIF:12524228
GeneRIF:16046411
GeneRIF:15795809
GeneRIF:12899679
GeneRIF:12791674
GeneRIF:15955385
GeneRIF:12765968
GeneRIF:12133430
GeneRIF:15795426
GeneRIF:16180331
GeneRIF:14646408
GeneRIF:15731326
Tomasz Adamusiak
GeneRIF:15331533
GeneRIF:14715842
GeneRIF:15870101
GeneRIF:15930442
GeneRIF:14993225
OBESITY NOS[accessedResource: ICD9:278.00][accessDate: 10-05-2010]
GeneRIF:15355432
GeneRIF:16222046
GeneRIF:15114524
GeneRIF:14663468
GeneRIF:12075569
GeneRIF:16054046
GeneRIF:12364441
GeneRIF:16200066
GeneRIF:12690079
GeneRIF:16048795
Obesity (disorder)[accessedResource: DOID:9970][accessDate: 10-05-2010]
GeneRIF:15292306
GeneRIF:12499395
GeneRIF:12519856
GeneRIF:15536594
An eating-related disorder in which excess body fat has accumulated to such an extent that health may be negatively affected. It is commonly defined as a body mass index (weight divided by height squared) of 30 kg/m2 or higher.
GeneRIF:15090636
GeneRIF:15292322
GeneRIF:12603007
GeneRIF:12968669
GeneRIF:15864530
GeneRIF:12435081
GeneRIF:15677498
GeneRIF:15240652
GeneRIF:12488961
GeneRIF:12033496
GeneRIF:12915696
GeneRIF:15055256
GeneRIF:14968297
GeneRIF:15476445
GeneRIF:12079879
GeneRIF:15939106
GeneRIF:15789277
GeneRIF:16054069
GeneRIF:15778720
GeneRIF:15070936
GeneRIF:15001632
GeneRIF:15331535
GeneRIF:12619866
GeneRIF:12925533
GeneRIF:12970296
GeneRIF:15886715
GeneRIF:15897476
GeneRIF:16135994
GeneRIF:15588160
GeneRIF:15596147
GeneRIF:12519848
GeneRIF:12508940
GeneRIF:15181046
GeneRIF:15002062
GeneRIF:12093799
GeneRIF:12083814
GeneRIF:15297289
GeneRIF:15220220
GeneRIF:15193430
GeneRIF:15959417
GeneRIF:15576462
GeneRIF:15798948
GeneRIF:15169894
GeneRIF:12569166
GeneRIF:12601637
GeneRIF:15277448
GeneRIF:15972581
GeneRIF:12217430
GeneRIF:15944845
GeneRIF:14693717
GeneRIF:12050239
GeneRIF:12050272
GeneRIF:15208271
GeneRIF:12213872
GeneRIF:15604363
GeneRIF:11866034
GeneRIF:15550470
GeneRIF:15834545
GeneRIF:15533384
GeneRIF:15336575
GeneRIF:12490667
GeneRIF:14660752
GeneRIF:12788932
GeneRIF:12529498
GeneRIF:14674682
GeneRIF:15063110
GeneRIF:14657411
GeneRIF:14726256
GeneRIF:11890967
GeneRIF:12829658
GeneRIF:11941369
GeneRIF:12055326
obesity
GeneRIF:15811564
GeneRIF:12767044
GeneRIF:12053815
GeneRIF:14742837
GeneRIF:11872365
GeneRIF:15042014
GeneRIF:12540600
GeneRIF:15466016
A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY).[accessedResource: MSH:D009765][accessDate: 10-05-2010]
GeneRIF:12855752
GeneRIF:12888635
GeneRIF:16054054
GeneRIF:12925701
GeneRIF:15166310
GeneRIF:15051828
GeneRIF:14660566
GeneRIF:12006640
GeneRIF:14693721
GeneRIF:15878965
SNOMEDCT:414915002
GeneRIF:16224049
GeneRIF:15654325
Obesity [Ambiguous]
GeneRIF:15292330
GeneRIF:14746672
Obesity (disorder)
GeneRIF:15613432
GeneRIF:12949354
GeneRIF:15916056
GeneRIF:12920182
GeneRIF:15660115
GeneRIF:12765950
GeneRIF:15156315
GeneRIF:11956156
GeneRIF:15797871
GeneRIF:16030142
GeneRIF:12574803
GeneRIF:15365617
GeneRIF:12086946
GeneRIF:15919794
GeneRIF:14671185
GeneRIF:15985479
GeneRIF:12609752
GeneRIF:15181539
GeneRIF:16102992
GeneRIF:15563274
GeneRIF:12728641
GeneRIF:11829746
GeneRIF:15063799
GeneRIF:15910756
GeneRIF:12865257
GeneRIF:11718682
GeneRIF:12226142
GeneRIF:15685173
GeneRIF:15855349
GeneRIF:15220187
GeneRIF:12660883
GeneRIF:15044674
GeneRIF:15087473
GeneRIF:12730403
GeneRIF:15862893
GeneRIF:15070922
GeneRIF:15292320
GeneRIF:12531492
GeneRIF:12101250
GeneRIF:16288749
GeneRIF:12032748
GeneRIF:12843170
GeneRIF:15601970
GeneRIF:12910269
Adiposity[accessedResource: SNOMEDCT:414916001][accessDate: 10-05-2010]
GeneRIF:12483461
GeneRIF:12951617
GeneRIF:12769595
GeneRIF:15337759
GeneRIF:12429872
GeneRIF:16166222
GeneRIF:15231997
GeneRIF:12810555
GeneRIF:15181048
GeneRIF:12133431
GeneRIF:12765952
GeneRIF:12163041
GeneRIF:16021472
GeneRIF:16027245
SNOMEDCT:414916001
GeneRIF:15034227
GeneRIF:15583845
GeneRIF:15382608
GeneRIF:12447443
GeneRIF:12529491
GeneRIF:12189588
Obesity [Ambiguous][accessedResource: DOID:9970][accessDate: 10-05-2010]
GeneRIF:12032760
GeneRIF:12161541
GeneRIF:12824951
GeneRIF:14600075
GeneRIF:15314024
GeneRIF:15314181
GeneRIF:15198934
GeneRIF:12788860
GeneRIF:12161058
GeneRIF:12900437
GeneRIF:12860835
GeneRIF:14567496
Adiposis[accessedResource: SNOMEDCT:414916001][accessDate: 10-05-2010]
GeneRIF:16222047
GeneRIF:12530526
GeneRIF:12365916
NIFSTD:nlx_dys_20090302
GeneRIF:11996962
GeneRIF:12552573
GeneRIF:12727947
GeneRIF:11800057
GeneRIF:12385894
GeneRIF:15168018
GeneRIF:15518421
GeneRIF:15102885
GeneRIF:15864349
GeneRIF:12540594
GeneRIF:12716769
GeneRIF:15520868
GeneRIF:15869602
GeneRIF:15048662
GeneRIF:12097321
GeneRIF:14970363
GeneRIF:12402973
GeneRIF:15037865
GeneRIF:15223990
GeneRIF:12484512
GeneRIF:12746756
GeneRIF:15191885
GeneRIF:15123613
GeneRIF:15823758
GeneRIF:12851317
James Malone
GeneRIF:15220914
Adiposity
GeneRIF:15994342
GeneRIF:14627764
GeneRIF:15769985
GeneRIF:15010337
GeneRIF:15070954
GeneRIF:12370125
GeneRIF:15598678
GeneRIF:12734779
GeneRIF:16186392
GeneRIF:12960041
GeneRIF:15743038
GeneRIF:14739355
GeneRIF:12882843
GeneRIF:14701677
GeneRIF:15448102
GeneRIF:15533361
GeneRIF:12175706
GeneRIF:11923308
GeneRIF:15494612
GeneRIF:15024085
GeneRIF:15382611
GeneRIF:15292348
GeneRIF:11912547
GeneRIF:15905321
GeneRIF:12031976
GeneRIF:15467829
GeneRIF:11791158
GeneRIF:15579796
GeneRIF:15601832
GeneRIF:12663465
GeneRIF:15735230
GeneRIF:15386812
OBESITY NOS
GeneRIF:16186414
GeneRIF:15854142
GeneRIF:15331532
Obesity, unspecified
GeneRIF:12213628
GeneRIF:12690102
GeneRIF:12213908
GeneRIF:12401727
GeneRIF:15298982
GeneRIF:12855762
GeneRIF:12660874
GeneRIF:14671186
GeneRIF:12507421
GeneRIF:11970899
GeneRIF:12177411
GeneRIF:14747205
GeneRIF:14747301
GeneRIF:16186410
GeneRIF:12364457
GeneRIF:15653680
GeneRIF:12409311
GeneRIF:12161552
GeneRIF:12086939
GeneRIF:14642615
GeneRIF:12902351
GeneRIF:15889231
GeneRIF:14551151
GeneRIF:15941924
GeneRIF:14707164
GeneRIF:15070752
GeneRIF:15522943
GeneRIF:15855321
GeneRIF:14715869
GeneRIF:12353079
GeneRIF:15181040
GeneRIF:11821707
GeneRIF:14625134
GeneRIF:12582011
GeneRIF:15919839
GeneRIF:14722031
GeneRIF:14764817
GeneRIF:15678704
GeneRIF:15897480
GeneRIF:16249436
GeneRIF:12068290
GeneRIF:15292352
GeneRIF:12642576
GeneRIF:12855749
GeneRIF:12387862
MSH:D009765
GeneRIF:15500001
GeneRIF:15770500
GeneRIF:12746327
GeneRIF:15637293
GeneRIF:15928242
GeneRIF:15919834
GeneRIF:15919835
GeneRIF:15746153
GeneRIF:15248831
GeneRIF:15983230
GeneRIF:12165561
GeneRIF:15890776
GeneRIF:14747283
GeneRIF:15334374
GeneRIF:15331564
ICD9:278.0
GeneRIF:12756299
GeneRIF:12480555
GeneRIF:14642408
GeneRIF:12739015
Obese
GeneRIF:12213871
GeneRIF:12865337
GeneRIF:15277400
GeneRIF:15845623
GeneRIF:14759071
GeneRIF:11739957
GeneRIF:15271881
GeneRIF:12376184
GeneRIF:14657196
GeneRIF:12075576
GeneRIF:12829631
GeneRIF:12679463
GeneRIF:15220189
Obese[accessedResource: SNOMEDCT:414915002][accessDate: 10-05-2010]
GeneRIF:12716767
GeneRIF:15688209
GeneRIF:11972291
GeneRIF:16260612
GeneRIF:15538935
GeneRIF:11882520
GeneRIF:14715497
GeneRIF:11882596
GeneRIF:15315911
GeneRIF:12032749
GeneRIF:12032642
GeneRIF:15677759
GeneRIF:15459958
GeneRIF:15620432
GeneRIF:15522935
GeneRIF:11916923
GeneRIF:15797955
GeneRIF:12598526
GeneRIF:12429873
GeneRIF:12634439
GeneRIF:12958061
GeneRIF:12055319
GeneRIF:15625086
GeneRIF:12861009
GeneRIF:12923129
GeneRIF:15070780
GeneRIF:16009937
GeneRIF:15781751
GeneRIF:12161655
GeneRIF:14637275
DOID:9970
GeneRIF:15057669
GeneRIF:14691540
GeneRIF:15920074
Obese (finding)
GeneRIF:15570174
GeneRIF:11822583
GeneRIF:12099975
GeneRIF:14682470
GeneRIF:15855351
Adiposis
GeneRIF:14683458
GeneRIF:15358131
Obesity, unspecified[accessedResource: DOID:9970][accessDate: 10-05-2010]
GeneRIF:15202783
GeneRIF:12160996
Obese (finding)[accessedResource: SNOMEDCT:414915002][accessDate: 10-05-2010]
GeneRIF:15616037
GeneRIF:12364415
GeneRIF:12885755
GeneRIF:15820771
GeneRIF:15111524
GeneRIF:12727933
GeneRIF:12165748
GeneRIF:12805252
GeneRIF:12730030
GeneRIF:12080444
GeneRIF:15055467
GeneRIF:11738809
GeneRIF:15855322
GeneRIF:16123358
GeneRIF:15531738
GeneRIF:12649573
GeneRIF:12032637
GeneRIF:16123374
GeneRIF:12869545
A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY).
GeneRIF:15923630
GeneRIF:12145151
GeneRIF:12716739
GeneRIF:12750152
GeneRIF:14673524
GeneRIF:15001633
GeneRIF:15983201
A disease is a disposition that describes states of disease associated with a particular sample and/or organism.
disease
James Malone
BC-2
James Malone
Ele Holloway
MOLT16
James Malone
Ele Holloway
ACT ERTH/ERYLK W/O RMSON[accessedResource: ICD9:207.00][accessDate: 10-05-2010]
James Malone
Acute erythremia and erythroleukemia without mention of remission[accessedResource: ICD9:207.00][accessDate: 10-05-2010]
acute erythroid leukemia
DOID:1239
Acute erythremia and erythroleukemia without mention of remission
ACT ERTH/ERYLK W/O RMSON
ICD9:207.00
ICD9:207.0
MO_663
http://www.ebi.ac.uk/efo/EFO_0002017
A heating block is an instrument or part of an instrument which raises or maintains the temperature of a sample to a defined constant temperature during certain parts of an assay
heating block
James Malone
ZFS:0000042
juvenile days 30-44
James Malone
dietilestilbestrol
alpha,alpha'-diethyl-(E)-4,4'-stilbenediol
CHEBI:41922
4,4'-(3E)-hex-3-ene-3,4-diyldiphenol
trans-Diethylstilbesterol
InChI=1/C18H20O2/c1-3-17(13-5-9-15(19)10-6-13)18(4-2)14-7-11-16(20)12-8-14/h5-12,19-20H,3-4H2,1-2H3/b18-17+
(E)-3,4-bis(4-hydroxyphenyl)-3-hexene
C18H20O2
4,4'-dihydroxy-alpha,beta-diethylstilbene
trans-Diethylstilbestrol
An estrogen that has formula C18H20O2.
trans-4,4'-(1,2-diethyl-1,2-ethenediyl)bisphenol
trans-Diethylstilboesterol
Distilbene
(E)-4,4'-(1,2-diethyl-1,2-ethenediyl)bisphenol
http://www.ebi.ac.uk/efo/EFO_0001522
diethylstilbestrol
InChIKey=RGLYKWWBQGJZGM-ISLYRVAYBW
James Malone
diethylstilbestrolum
CC\\C(c1ccc(O)cc1)=C(\\CC)c1ccc(O)cc1
sarcoblast
James Malone
An embryonic cell that becomes a cell of muscle fiber.
myoblast
An embryonic (precursor) cell of the myogenic lineage that develops from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes.
An embryonic cell that becomes a cell of muscle fiber.[accessedResource: BTO:0000222][accessDate: 10-05-2010]
sarcoblast[accessedResource: BTO:0000222][accessDate: 10-05-2010]
BTO:0000222
An embryonic (precursor) cell of the myogenic lineage that develops from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes.[accessedResource: CL:0000056][accessDate: 10-05-2010]
CL:0000056
SN56.B5.G4
James Malone
Ele Holloway
oligodendroglia[accessedResource: CL:0000128][accessDate: 10-05-2010]
oligodendrocyte
A class of large neuroglial (macroglial) cells in the central nervous system. Form the insulating myelin sheath of axons in the central nervous system.[accessedResource: CL:0000128][accessDate: 10-05-2010]
A class of large neuroglial (macroglial) cells in the central nervous system. Oligodendroglia may be called interfascicular, perivascular, or perineuronal (not the same as satellite cells, perineuronal of ganglia) according to their location. They form the insulating myelin sheath of axons in the central nervous system (MSH).[accessedResource: NIFSTD:sao844118448][accessDate: 10-05-2010]
oligodendroglia
A class of large neuroglial (macroglial) cells in the central nervous system. Form the insulating myelin sheath of axons in the central nervous system.
Tomasz Adamusiak
A class of large neuroglial (macroglial) cells in the central nervous system. Oligodendroglia may be called interfascicular, perivascular, or perineuronal (not the same as satellite cells, perineuronal of ganglia) according to their location. They form the insulating myelin sheath of axons in the central nervous system (MSH).
NIFSTD:sao844118448
CL:0000128
NIFSTD:sao2146594471
MAT:0000481
muscle precursor cell
A precursor is a tissue modifier describing a substance, cell, or cellular component from which another substance, cell, or cellular component is formed. For example, muscle precursor cell.
precursor
Tomasz Adamusiak
James Malone
meninx[accessedResource: BTO:0000144][accessDate: 10-05-2010]
MA:0000113
EV:0100312
BTO:0000144
FMAID:9589
Any of the three membranes that envelop the brain and spinal cord.[accessedResource: BTO:0000144][accessDate: 10-05-2010]
SAEL:66
meninx
MAT:0000113
James Malone
EMAPA:17764
EHDAA:3688
meninges
Any of the three membranes that envelop the brain and spinal cord.
GeneRIF:14514642
SNOMEDCT:315299009
GeneRIF:12196481
GeneRIF:12149242
GeneRIF:15561954
Hyperglycemias, Postprandial
GeneRIF:15845625
GeneRIF:14984315
GeneRIF:14578285
[D]Hyperglycemia[accessedResource: SNOMEDCT:315299009][accessDate: 10-05-2010]
GeneRIF:14749287
Hyperglycaemia[accessedResource: SNOMEDCT:80394007][accessDate: 10-05-2010]
GeneRIF:12963802
Abnormally high BLOOD GLUCOSE level after a meal.
GeneRIF:12376320
GeneRIF:12759458
GeneRIF:15855318
GeneRIF:11959624
GeneRIF:12645629
Hyperglycemia, Postprandial
Hyperglycemia (disorder)
GeneRIF:12453975
[D]Hyperglycemia (situation)
GeneRIF:15259033
GeneRIF:15486815
GeneRIF:15985479
GeneRIF:15868137
Abnormally high BLOOD GLUCOSE level.
Postprandial Hyperglycemias[accessedResource: MSH:D006943][accessDate: 10-05-2010]
GeneRIF:15662550
hyperglycemia (context-dependent category)[accessedResource: DOID:4195][accessDate: 10-05-2010]
Hyperglycaemia, NOS[accessedResource: SNOMEDCT:80394007][accessDate: 10-05-2010]
[D]Elevated blood glucose level[accessedResource: SNOMEDCT:315299009][accessDate: 10-05-2010]
Abnormally high BLOOD GLUCOSE level.[accessedResource: MSH:D006943][accessDate: 10-05-2010]
GeneRIF:12107734
Hyperglycemia, NOS
DOID:4195
GeneRIF:12464674
GeneRIF:12522068
GeneRIF:15899886
GeneRIF:14534319
[D]Hyperglycemia (context-dependent category)
Hyperglycemias[accessedResource: MSH:D006943][accessDate: 10-05-2010]
GeneRIF:15561908
[D]Hyperglycemia (context-dependent category)[accessedResource: SNOMEDCT:315299009][accessDate: 10-05-2010]
Hyperglycaemia
GeneRIF:12137596
GeneRIF:12736712
GeneRIF:15277392
GeneRIF:15993383
GeneRIF:15899957
GeneRIF:14678947
Hyperglycemia (context-dependent category)
GeneRIF:12655575
[D]Hyperglycemia
Hyperglycemia, Postprandial[accessedResource: MSH:D006943][accessDate: 10-05-2010]
GeneRIF:15148392
[D]Hyperglycaemia
Hyperglycaemia, NOS
James Malone
SNOMEDCT:80394007
GeneRIF:12765965
GeneRIF:15920055
GeneRIF:15501243
GeneRIF:14673082
hyperglycemia
GeneRIF:15616014
GeneRIF:16301823
GeneRIF:15033467
GeneRIF:15677479
Hyperglycemia, NOS[accessedResource: SNOMEDCT:80394007][accessDate: 10-05-2010]
Abnormally high BLOOD GLUCOSE level after a meal.[accessedResource: MSH:D006943][accessDate: 10-05-2010]
Hyperglycemias
GeneRIF:15191885
GeneRIF:12819007
GeneRIF:12482638
[D]Hyperglycemia (situation)[accessedResource: SNOMEDCT:315299009][accessDate: 10-05-2010]
GeneRIF:15848159
[D]Elevated blood glucose level
Hyperglycemia (disorder)[accessedResource: SNOMEDCT:80394007][accessDate: 10-05-2010]
MSH:D006943
[D]Hyperglycaemia[accessedResource: SNOMEDCT:315299009][accessDate: 10-05-2010]
GeneRIF:14751239
GeneRIF:15010337
GeneRIF:15956778
GeneRIF:14698990
GeneRIF:12860835
corpora pedunculata[accessedResource: FBbt:00005801][accessDate: 10-05-2010]
Paired neuropil structure, situated postero-dorsally in the protocerebrum, which are thought to be crucial to olfactory associative learning and memory. Mushroom bodies are divided into: the calyx, closest to the cortex, which receives sensory interneuron afferents; a thick axon bundle called the pedunculus, which extends from the calyx to the base of the lobes; the mushroom body lobe system consisting of a vertical branch composed of two intertwined lobes (alpha and alpha') and a medial branch consisting of three parallel lobes (beta, beta' and gamma).
BTO:0002675
MAT:0000336
corpora pedunculata
FBbt:00005801
Paired neuropil structure situated postero-dorsally in the protocerebrum, which are thought to be crucial to olfactory associative learning and memory. The mushroom body is divided into: the calyx, which is closest to the cortex and receives sensory interneuron afferents; the pedunculus, which is a thick axon bundle extending from the calyx to the base of the lobes; the mushroom body lobe system, which consists of a vertical branch composed of two intertwined lobes (alpha and alpha') and a medial branch consisting of three parallel lobes (beta, beta' and gamma).[accessedResource: FBbt:00005801][accessDate: 10-05-2010]
Paired neuropil structure situated postero-dorsally in the protocerebrum, which are thought to be crucial to olfactory associative learning and memory. The mushroom body is divided into: the calyx, which is closest to the cortex and receives sensory interneuron afferents; the pedunculus, which is a thick axon bundle extending from the calyx to the base of the lobes; the mushroom body lobe system, which consists of a vertical branch composed of two intertwined lobes (alpha and alpha') and a medial branch consisting of three parallel lobes (beta, beta' and gamma).
James Malone
mushroom body
The Drosophila mushroom bodies (MBs), paired brain structures composed of vertical and medial lobes, achieve their final organization at metamorphosis.[accessedResource: BTO:0002675][accessDate: 10-05-2010]
The Drosophila mushroom bodies (MBs), paired brain structures composed of vertical and medial lobes, achieve their final organization at metamorphosis.
http://www.arabidopsis.org/servlets/TairObject?id=1005158690&type=germplasm
CS57664 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158690&type=germplasm
CS57666
James Malone
GLI72
James Malone
NCIt:C26788
chronic granulomatous disease
A recessive X-linked defect of leukocyte function in which phagocytic cells ingest but fail to digest bacteria, resulting in recurring bacterial infections with granuloma formation.
GRANULOMATOUS DIS CHRONIC
GeneRIF:15777347
Congenital dysphagocytosis[accessedResource: DOID:3265][accessDate: 10-05-2010]
MSH:D006105
Chronic granulomatous disease (disorder)[accessedResource: SNOMEDCT:387759001][accessDate: 10-05-2010]
GeneRIF:16138344
GRANULOMATOUS DIS CHRONIC[accessedResource: MSH:D006105][accessDate: 10-05-2010]
James Malone
CGD[accessedResource: NCIt:C26788][accessDate: 10-05-2010]
GeneRIF:12817011
GeneRIF:12073015
GeneRIF:11462241
CGD - Chronic granulomatous disease[accessedResource: SNOMEDCT:387759001][accessDate: 10-05-2010]
Congenital dysphagocytosis (disorder)[accessedResource: SNOMEDCT:191352003][accessDate: 10-05-2010]
A recessive X-linked defect of leukocyte function in which phagocytic cells ingest but fail to digest bacteria, resulting in recurring bacterial infections with granuloma formation.[accessedResource: MSH:D006105][accessDate: 10-05-2010]
GeneRIF:12589359
Chronic Granulomatous Diseases
CGD - Chronic granulomatous disease
GeneRIF:15507755
CGD
SNOMEDCT:387759001
Chronic Granulomatous Diseases[accessedResource: MSH:D006105][accessDate: 10-05-2010]
Congenital dysphagocytosis (disorder)
DOID:3265
chronic granulomatous disease (disorder)
GeneRIF:12213046
SNOMEDCT:191352003
Congenital dysphagocytosis
SQ-5
James Malone
Ele Holloway
SW948
James Malone
Ele Holloway
ZFS:0000026
segmentation 14-19 somites
James Malone
MAT:0000338
The peripheral nervous system (PNS) connects the central nervous system (CNS) to sensory organs (such as the eye and ear), other organs of the body, muscles, blood vessels and glands.
EHDAA:2893
The peripheral nervous system (PNS) connects the central nervous system (CNS) to sensory organs (such as the eye and ear), other organs of the body, muscles, blood vessels and glands.[accessedResource: BTO:0001028][accessDate: 10-05-2010]
TADS:0000221
XAO:0000178
PNS[accessedResource: BTO:0001028][accessDate: 10-05-2010]
peripheral nervous system
EMAPA:16665
BTO:0001028
AAO:0000429
FBbt:00005098
The outer parts of the nervous system that perform sensory and motor functions.
James Malone
The outer parts of the nervous system that perform sensory and motor functions.[accessedResource: FBbt:00005098][accessDate: 10-05-2010]
PNS
A673
James Malone
Ele Holloway
James Malone
HCC1569
4-(4-(para-chlorophenyl)-4-hydroxypiperidino)-4'-fluorobutyrophenone
CHEBI:5613
A compound composed of a central piperidine structure with hydroxy and p-chlorophenyl substituents at position 4; and an N-linked p-fluorobutyrophenone moiety.
OC1(CCN(CCCC(=O)c2ccc(F)cc2)CC1)c1ccc(Cl)cc1
1-(3-p-fluorobenzoylpropyl)-4-p-chlorophenyl-4-hydroxypiperidine
C21H23ClFNO2
InChI=1/C21H23ClFNO2/c22-18-7-5-17(6-8-18)21(26)11-14-24(15-12-21)13-1-2-20(25)16-3-9-19(23)10-4-16/h3-10,26H,1-2,11-15H2
Haldol
haloperidolum
4-[4-(4-chlorophenyl)-4-hydroxypiperidin-1-yl]-1-(4-fluorophenyl)butan-1-one
4'-fluoro-4-(4-hydroxy-4-(4'-chlorophenyl)piperidino)butyrophenone
haloperidol
InChIKey=LNEPOXFFQSENCJ-UHFFFAOYAL
gamma-(4-(p-chlorophenyl)-4-hydroxpiperidino)-p-fluorbutyrophenone
A hydroxypiperidine that has formula C21H23ClFNO2.
http://www.ebi.ac.uk/efo/EFO_0001549
4'-fluoro-4-(4-(p-chlorophenyl)-4-hydroxypiperidinyl)butyrophenone
4-[4-(4-chlorophenyl)-4-hydroxy-1-piperidyl]-1-(4-fluorophenyl)-butan-1-one
muscles[accessedResource: TAO:0000548][accessDate: 10-05-2010]
James Malone
musculature[accessedResource: MAT:0000025][accessDate: 10-05-2010]
muscle system[accessedResource: MAT:0000025][accessDate: 10-05-2010]
MAT:0000025
AAO:0000307
MA:0000015
musculature
TAO:0000548
The bodily system that is composed of skeletal, smooth, and cardiac muscle tissue and functions in movement of the body or of materials through the body, maintenance of posture, and heat production.[accessedResource: BTO:0001485][accessDate: 10-05-2010]
MFO:0002100
ZFA:0000548
muscular system
BTO:0001485
TADS:0000324
muscle system
EV:0100146
The bodily system that is composed of skeletal, smooth, and cardiac muscle tissue and functions in movement of the body or of materials through the body, maintenance of posture, and heat production.
motor system[accessedResource: MAT:0000025][accessDate: 10-05-2010]
muscles
WBbt:0005737
FBbt:00005069
motor system
musculature system
muscle
muscule system
musculature system[accessedResource: MAT:0000025][accessDate: 10-05-2010]
muscle[accessedResource: MAT:0000025][accessDate: 10-05-2010]
James Malone
HepG2
interstitial cell[accessedResource: CL:0000178][accessDate: 10-05-2010]
interstitial cell
CL:0000178
Leydig cell
James Malone
testis - leydig cell
A gene list is a report of the names or identifiers of genes that are the outcome of an analysis or have been put together for the purpose of an analysis.
gene list
Chris Stoeckert
PO:0000014
rosette leaf
James Malone
TADS:0000172
MAT:0000051
James Malone
EV:0100070
TGMA:0001041
stomach
MA:00000353
A flask-shaped posterior region, which retains the blood meal, and which in culicines is capable of much distension.
BTO:0001307
gaster
Organ with organ cavity which is continuous proximally with the esophagus and distally with the small intestine. Examples: There is only one stomach.
EMAPA:17021
Organ with organ cavity which is continuous proximally with the esophagus and distally with the small intestine. Examples: There is only one stomach.[accessedResource: FMAID:7148][accessDate: 10-05-2010]
MFO:0003120
A dilatation of the alimentary canal of a vertebrate communicating anteriorly with the esophagus and posteriorly with the duodenum.
A dilatation of the alimentary canal of a vertebrate communicating anteriorly with the esophagus and posteriorly with the duodenum.[accessedResource: BTO:0001307][accessDate: 10-05-2010]
A flask-shaped posterior region, which retains the blood meal, and which in culicines is capable of much distension.[accessedResource: TGMA:0001041][accessDate: 10-05-2010]
EHDAA:2993
SAEL:102
FMAID:7148
AAO:0000579
gaster[accessedResource: BTO:0001307][accessDate: 10-05-2010]
XAO:0000128
Classic Invasive Lobular Carcinoma[accessedResource: NCIt:C7950][accessDate: 10-05-2010]
James Malone
Infiltrating Lobular Adenocarcinoma[accessedResource: NCIt:C7950][accessDate: 10-05-2010]
Invasive Lobular Carcinoma of the Breast[accessedResource: NCIt:C7950][accessDate: 10-05-2010]
Infiltrating Lobular Carcinoma of Breast[accessedResource: NCIt:C7950][accessDate: 10-05-2010]
Infiltrating Lobular Breast Carcinoma[accessedResource: NCIt:C7950][accessDate: 10-05-2010]
Invasive Lobular Carcinoma, Classic Type[accessedResource: NCIt:C7950][accessDate: 10-05-2010]
Infiltrating Lobular Carcinoma of Breast
An infiltrating lobular adenocarcinoma. The malignant cells lack cohesion and are arranged individually or in a linear manner (Indian files), or as narrow trabeculae within the stroma. The malignant cells are usually smaller than those of ductal carcinoma, are less pleomorphic, and have fewer mitotic figures.
Invasive Lobular Carcinoma, Classic Type
An infiltrating lobular adenocarcinoma. The malignant cells lack cohesion and are arranged individually or in a linear manner (Indian files), or as narrow trabeculae within the stroma. The malignant cells are usually smaller than those of ductal carcinoma, are less pleomorphic, and have fewer mitotic figures.[accessedResource: NCIt:C7950][accessDate: 10-05-2010]
Invasive Lobular carcinoma of breast[accessedResource: DOID:3460][accessDate: 10-05-2010]
Invasive Lobular Carcinoma of the Breast
Infiltrating Lobular Adenocarcinoma
Invasive Lobular Adenocarcinoma
Invasive Lobular Breast Carcinoma[accessedResource: NCIt:C7950][accessDate: 10-05-2010]
Classic Invasive Lobular Carcinoma
Invasive Lobular Adenocarcinoma[accessedResource: NCIt:C7950][accessDate: 10-05-2010]
Infiltrating Lobular Carcinoma of the Breast
infiltrating lobular carcinoma
Infiltrating Lobular Carcinoma of the Breast[accessedResource: NCIt:C7950][accessDate: 10-05-2010]
Infiltrating Lobular Breast Carcinoma
Invasive Lobular Breast Carcinoma
invasive lobular carcinoma
DOID:3460
NCIt:C7950
Invasive Lobular Carcinoma of Breast
BY5251
James Malone
Juvenile Diabetes[accessedResource: NCIt:C2986][accessDate: 10-05-2010]
GeneRIF:12663624
GeneRIF:12004163
GeneRIF:12021142
GeneRIF:12187923
Juvenile Diabetes
GeneRIF:14563018
GeneRIF:12351486
GeneRIF:15928253
GeneRIF:11916169
Type 1 Diabetes[accessedResource: NCIt:C2986][accessDate: 10-05-2010]
Type 1 Diabetes Mellitus
GeneRIF:12479587
Diabetes mellitus type I [insulin dependent type] [IDDM] [juvenile type], not stated as uncontrolled, with unspecified complication
GeneRIF:11286636
Type 1 Diabetes Mellitus[accessedResource: NCIt:C2986][accessDate: 10-05-2010]
GeneRIF:12107733
GeneRIF:12185534
GeneRIF:15208781
GeneRIF:12189440
Insulin dependent diabetes mellitus
Type 1 Diabetes
GeneRIF:15483661
Insulin Dependent Diabetes[accessedResource: NCIt:C2986][accessDate: 10-05-2010]
DMI UNSPF NT ST UNCNTRLD[accessedResource: ICD9:250.91][accessDate: 10-05-2010]
GeneRIF:12221281
IDDM - Insulin-dependent diabetes mellitus[accessedResource: SNOMEDCT:46635009][accessDate: 10-05-2010]
Diabetes mellitus type I [insulin dependent type] [IDDM] [juvenile type], uncontrolled, with unspecified complication
GeneRIF:12200073
GeneRIF:11914751
GeneRIF:11975985
GeneRIF:14614560
GeneRIF:12743700
IDDM
GeneRIF:12457456
James Malone
ICD9:250.93
DMI UNSPF NT ST UNCNTRLD
Insulin Dependent Diabetes Mellitus[accessedResource: NCIt:C2986][accessDate: 10-05-2010]
Type I Diabetes[accessedResource: NCIt:C2986][accessDate: 10-05-2010]
GeneRIF:12039523
DOID:9744
GeneRIF:12083814
GeneRIF:15189740
GeneRIF:12153746
GeneRIF:12622777
GeneRIF:14557453
NCIt:C2986
Type I Diabetes
Insulin Dependent Diabetes
GeneRIF:16054858
SNOMEDCT:46635009
GeneRIF:12878786
ICD9:250.91
Diabetes mellitus type I [insulin dependent type] [IDDM] [juvenile type], not stated as uncontrolled, with unspecified complication[accessedResource: ICD9:250.91][accessDate: 10-05-2010]
GeneRIF:12021143
GeneRIF:11981430
GeneRIF:14583186
type I diabetes mellitus
GeneRIF:12874455
Diabetes mellitus type 1 (disorder)[accessedResource: SNOMEDCT:46635009][accessDate: 10-05-2010]
Diabetes mellitus type I [insulin dependent type] [IDDM] [juvenile type], uncontrolled, with unspecified complication[accessedResource: ICD9:250.93][accessDate: 10-05-2010]
GeneRIF:12187924
GeneRIF:12351483
GeneRIF:12021138
GeneRIF:14633852
IDDM[accessedResource: SNOMEDCT:46635009][accessDate: 10-05-2010]
GeneRIF:11916171
GeneRIF:15950078
Juvenile onset diabetes mellitus[accessedResource: SNOMEDCT:46635009][accessDate: 10-05-2010]
GeneRIF:12381897
GeneRIF:12118252
Diabetes mellitus characterized by insulin deficiency, sudden onset, severe hyperglycemia, rapid progression to ketoacidosis, and death unless treated with insulin. The disease may occur at any age, but is most common in childhood or adolescence.
Juvenile onset diabetes mellitus
GeneRIF:11845233
GeneRIF:12788886
GeneRIF:15786423
Diabetes mellitus type 1 (disorder)
GeneRIF:12951629
GeneRIF:12086959
IDDM - Insulin-dependent diabetes mellitus
DMI UNSPF UNCNTRLD
GeneRIF:11466400
DMI UNSPF UNCNTRLD[accessedResource: ICD9:250.93][accessDate: 10-05-2010]
GeneRIF:11943852
GeneRIF:12819903
Diabetes mellitus characterized by insulin deficiency, sudden onset, severe hyperglycemia, rapid progression to ketoacidosis, and death unless treated with insulin. The disease may occur at any age, but is most common in childhood or adolescence.[accessedResource: NCIt:C2986][accessDate: 10-05-2010]
GeneRIF:11841494
GeneRIF:14962949
InChI=1/V
vanadio
CHEBI:27698
James Malone
23V
Vanadium
A vanadium group element that has formula V.
InChIKey=LEONUFNNVUYDNQ-UHFFFAOYAR
V
vanadium atom
http://www.ebi.ac.uk/efo/EFO_0001635
A vanadium group element atom that has formula V.
MO_476
http://www.ebi.ac.uk/efo/EFO_0002013
A centrifuge is an instrument, generally driven by a motor, that puts an object in rotation around a fixed axis, applying force perpendicular to the axis. The centrifuge works using the sedimentation principle, where the centripetal acceleration is used to separate substances of greater and lesser density.
centrifuge
James Malone
OE21
James Malone
Ele Holloway
Tomasz Adamusiak
mM
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001806
James Malone
A unit of molarity which is equal to one thousandth of a molar or 10^[-3] M.
MO_509
millimolar
true
A millimolar is a unit of molarity which is equal to one thousandth of a molar or 10^-3 M.
http://jaxmice.jax.org/strain/009302.html
ILSXISS26/TejJ
Tomasz Adamusiak
The act of regarding attentively and studying facts and occurrences, gathering data through analyzing, measuring, and drawing conclusions
observation study
James Malone
abscisin II
(7E,9Z)-(6S)-6-hydroxy-3-oxo-11-apo-epsilon-caroten-11-oic acid
CHEBI:2365
http://www.ebi.ac.uk/efo/EFO_0001464
2-cis,4-trans-abscisic acid
The naturally occurring (1'S)-(+) enantiomer of abscisic acid. It is an important sesquiterpenoid plant hormone which acts as a regulator of plant responses to environmental stresses such as drought and cold.
InChIKey=JLIDBLDQVAYHNE-MPLKMVHTDC
(2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid
ABA
(S)-(+)-abscisic acid
An abscisic acid that has formula C15H20O4.
James Malone
CC(\\C=C\\[C@@]1(O)C(C)=CC(=O)CC1(C)C)=C\\C(O)=O
(+)-abscisic acid
C15H20O4
InChI=1/C15H20O4/c1-10(7-13(17)18)5-6-15(19)11(2)8-12(16)9-14(15,3)4/h5-8,19H,9H2,1-4H3,(H,17,18)/b6-5+,10-7-/t15-/m1/s1/f/h17H
Actinic keratosis (morphologic abnormality)
James Malone
actinic keratosis (disorder)
actinic keratosis (disorder)[accessedResource: DOID:8866][accessDate: 10-05-2010]
Senile hyperkeratosis
actinic keratosis (morphologic abnormality)[accessedResource: DOID:8866][accessDate: 10-05-2010]
actinic keratosis
Ele Holloway
DOID:8866
SK - Solar keratosis[accessedResource: DOID:8866][accessDate: 10-05-2010]
actinic (Solar) Keratosis[accessedResource: DOID:8866][accessDate: 10-05-2010]
actinic (Solar) Keratosis
SK - Solar keratosis
Solar keratosis
Senile hyperkeratosis[accessedResource: DOID:8866][accessDate: 10-05-2010]
Solar keratosis[accessedResource: DOID:8866][accessDate: 10-05-2010]
true
A specifically dependent continuant [snap:SpecificallyDependentContinuant] that is exhibited if it inheres in an entity or entities at all (a categorical property).
http://www.ebi.ac.uk/efo/EFO_0001436
A quality is an entity that describes some aspect which is intrinsic to that particular object and is dependent on or more material entities in which it inheres in or is borne by. Example the color of a tomato, the ambient temperature of air, the circumference of a waist, the shape of a nose, the mass of a piece of gold, the weight of a chimpanzee
quality
James Malone
UO:0000026
true
http://www.ebi.ac.uk/efo/EFO_0001709
fg
femtogram
James Malone
A mass unit which is equal to 10^[-15] g.
A microgram is a mass unit which is equal to 1 gram x 10^-15
glitazones
tiazolidinedionas
James Malone
insulin-sensitizing drug
An agent which overcomes insulin resistance by activation of the peroxisome proliferator activated receptor gamma (PPAR-gamma).
glitazone drug
CHEBI:50864
thiazolidinediones
glitazonas
insulin sensitizers
http://www.ebi.ac.uk/efo/EFO_0001839
HUVEC cell line
Ele Holloway
GDM 1
James Malone
GDM1
A cell line derived from a human patient with Philadelphia chromosome negative myeloproliferative disorder, after transformation to acute myelomonoblastic leukemia.http://www.ncbi.nlm.nih.gov/pubmed/6296552
TE85
James Malone
Ele Holloway
BT483
James Malone
neurointermediate lobe
James Malone
Ele Holloway
SNU16
James Malone
Ele Holloway
HCT-15
HCT15
James Malone
Ele Holloway
stigma
James Malone
GRO:0005433
GRO:0005433[accessedResource: BTO:0001303][accessDate: 10-05-2010]
The usually apical part of the pistil of a flower which receives the pollen grains and on which they germinate.
MAT:0000524
The usually apical part of the pistil of a flower which receives the pollen grains and on which they germinate.[accessedResource: BTO:0001303][accessDate: 10-05-2010]
BTO:0001303
PO:0009073
TAO:0001105
animal developmental tissue
Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.
.[accessedResource: FBbt:00000052][accessDate: 10-05-2010]
James Malone
FBbt:00000052
Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[accessedResource: TAO:0001105][accessDate: 10-05-2010]
.
Tomasz Adamusiak
oxidane
[H]O[H]
http://www.ebi.ac.uk/efo/EFO_0001637
water
InChI=1/H2O/h1H2
eau
An inorganic hydroxy compound that has formula H2O.
James Malone
Jie Zheng
InChIKey=XLYOFNOQVPJJNP-UHFFFAOYAF
BOUND WATER
acqua
hydrogen hydroxide
aqua
Wasser
HOH
[OH2]
dihydrogen oxide
dihydridooxygen
MO_380
agua
H2O
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Form the myelin insulation of nervous pathways, guide neuronal migration during development, and exchange metabolites with neurons. Neuroglia have high-affinity transmitter uptake systems, voltage-dependent and transmitter-gated ion channels, and can release transmitters, but their role in signaling (as in many other functions) is unclear.[accessedResource: CL:0000243][accessDate: 10-05-2010]
James Malone
CL:0000243
true
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Form the myelin insulation of nervous pathways, guide neuronal migration during development, and exchange metabolites with neurons. Neuroglia have high-affinity transmitter uptake systems, voltage-dependent and transmitter-gated ion channels, and can release transmitters, but their role in signaling (as in many other functions) is unclear.
use EFO_0000517
obsolete_glial cell (sensu Vertebrata)
1.9
http://www.arabidopsis.org/servlets/TairObject?id=1005158849&type=germplasm
CS57825 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158849&type=germplasm
CS57825
James Malone
CL:0000099
GABAergic interneuron
Most generally any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region as contrasted with projection neurons which have axons projecting to other brain regions.
Most generally any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region as contrasted with projection neurons which have axons projecting to other brain regions.[accessedResource: CL:0000099][accessDate: 10-05-2010]
interneuron
James Malone
James Malone
A realizable entity [snap:RealizableEntity] that essentially causes a specific process or transformation in the object [snap:Object] in which it inheres, under specific circumstances and in conjunction with the laws of nature. A general formula for dispositions is: X (object [snap:Object] has the disposition D to (transform, initiate a process) R under conditions C.
http://www.ebi.ac.uk/efo/EFO_0001438
For example, the disposition of vegetables to decay when not refrigerated, the disposition of blood to coagulate, the disposition of a patient with a weakened immune system to contract disease.
A disposition is an entity that essentially causes a specific process or transformation in an entity in which it inheres, under specific circumstances and in conjunction with the laws of nature. For example, the disposition of vegetables to decay when not refrigerated, the disposition of blood to coagulate, the disposition of a patient with a weakened immune system to contract disease.
disease property
true
disposition
James Malone
colony forming unit hematopoietic[accessedResource: CL:0000037][accessDate: 10-05-2010]
hematopoietic stem cell
hemopoietic progenitor cell
CL:0000037
hemopoietic stem cell[accessedResource: CL:0000037][accessDate: 10-05-2010]
hematopoietic progenitor cell
hemopoietic stem cell
hemopoietic progenitor cell[accessedResource: CL:0000037][accessDate: 10-05-2010]
HSC[accessedResource: CL:0000037][accessDate: 10-05-2010]
colony forming unit hematopoietic
A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.
HSC
hematopoietic progenitor cell[accessedResource: CL:0000037][accessDate: 10-05-2010]
A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.[accessedResource: CL:0000037][accessDate: 10-05-2010]
http://www.arabidopsis.org/servlets/TairObject?id=1005158910&type=germplasm
CS57886 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158910&type=germplasm
CS57886
James Malone
MO_675
species design
Tomasz Adamusiak
FBbt:00005629
embryonic gastric caecum
James Malone
ArrayExpress production team
An assay in which a microRNA array is used to analyse the microRNA component of the transcriptome.
microRNA profiling by array
James Malone
C10H17N3O6S
glutathione
5-L-Glutamyl-L-cysteinylglycine
A tripeptide compound consisting of glutamic acid attached via its side chain to the N-terminus of cysteinylglycine.
GSH
Reduced glutathione
N-(N-gamma-L-Glutamyl-L-cysteinyl)glycine
L-gamma-glutamyl-L-cysteinylglycine
NIFSTD:nlx_mol_20090201
N[C@@H](CCC(=O)N[C@@H](CS)C(=O)NCC(O)=O)C(O)=O
InChI=1/C10H17N3O6S/c11-5(10(18)19)1-2-7(14)13-6(4-20)9(17)12-3-8(15)16/h5-6,20H,1-4,11H2,(H,12,17)(H,13,14)(H,15,16)(H,18,19)/t5-,6-/m0/s1/f/h12-13,15,18H
GSH Glutathione is a tripeptide. It contains an unusual peptide linkage between the amine group of cysteine and the carboxyl group of the glutamate side chain. It is an antioxidant that protects cells from toxins such as free radicals.
http://www.ebi.ac.uk/efo/EFO_0001547
GSH Glutathione is a tripeptide. It contains an unusual peptide linkage between the amine group of cysteine and the carboxyl group of the glutamate side chain. It is an antioxidant that protects cells from toxins such as free radicals.[accessedResource: NIFSTD:nlx_mol_20090201][accessDate: 10-05-2010]
InChIKey=RWSXRVCMGQZWBV-VSCBVDDUDG
gamma-L-Glutamyl-L-cysteinyl-glycine
Tomasz Adamusiak
FBbt:00001056
embryonic central nervous system
James Malone
4470
James Malone
Ele Holloway
true
A derived unit which is a standard measure of physical quantity consisting of only a numerical number without any units.
dimensionless unit
Squamous cell carcinoma of lung[accessedResource: SNOMEDCT:254634000][accessDate: 10-05-2010]
DOID:3907
SNOMEDCT:254634000
Epidermoid carcinoma of lung
SCC - Squamous cell carcinoma of lung[accessedResource: SNOMEDCT:254634000][accessDate: 10-05-2010]
SCC - Squamous cell carcinoma of lung
GeneRIF:12107845
Epidermoid Cell Carcinoma of the Lung
Epidermoid Cell Carcinoma of the Lung[accessedResource: NCIt:C3493][accessDate: 10-05-2010]
squamous cell carcinoma of lung (disorder)[accessedResource: DOID:3907][accessDate: 10-05-2010]
Epidermoid Cell Carcinoma of Lung
A carcinoma arising from malignant squamous bronchial epithelial cells and characterized by the presence of keratinization and/or intercellular bridges. Cigarette smoking and arsenic exposure are strongly associated with squamous cell lung carcinoma.[accessedResource: NCIt:C3493][accessDate: 10-05-2010]
GeneRIF:15889794
James Malone
NCIt:C3493
Epidermoid carcinoma of lung[accessedResource: SNOMEDCT:254634000][accessDate: 10-05-2010]
Epidermoid Cell Lung Carcinoma[accessedResource: NCIt:C3493][accessDate: 10-05-2010]
A carcinoma arising from malignant squamous bronchial epithelial cells and characterized by the presence of keratinization and/or intercellular bridges. Cigarette smoking and arsenic exposure are strongly associated with squamous cell lung carcinoma.
squamous cell lung carcinoma
Squamous Cell Carcinoma of the Lung[accessedResource: NCIt:C3493][accessDate: 10-05-2010]
Squamous cell carcinoma of lung (disorder)
Epidermoid Cell Lung Carcinoma
Squamous Cell Carcinoma of Lung
Epidermoid Cell Carcinoma of Lung[accessedResource: NCIt:C3493][accessDate: 10-05-2010]
Squamous Cell Carcinoma of the Lung
NCIH1563
James Malone
Ele Holloway
JCRB0819
SBC-5
James Malone
Ele Holloway
submaxillary gland
submandibular gland
submaxillary gland[accessedResource: BTO:0001316][accessDate: 10-05-2010]
One of two salivary glands in the neck, located in the space bound by the two bellies of the digastric muscle and the angle of the mandible. It discharges through the submandibular duct. (MeSH)
One of the three chief, paired salivary glands, predominantly serous, lying partly above and partly below the posterior half of the base of the mandible.
One of the three chief, paired salivary glands, predominantly serous, lying partly above and partly below the posterior half of the base of the mandible.[accessedResource: BTO:0001316][accessDate: 10-05-2010]
BTO:0001316
One of two salivary glands in the neck, located in the space bound by the two bellies of the digastric muscle and the angle of the mandible. It discharges through the submandibular duct. (MeSH)[accessedResource: NCIt:C12233][accessDate: 10-05-2010]
James Malone
NCIt:C12233
MO_520
funder
Tomasz Adamusiak
CL:0000337
neuroblast
adrenal neuroblast
neuroblast[accessedResource: CL:0000337][accessDate: 10-05-2010]
neuroblast (sensu Vertebrata)
James Malone
https://www.cbil.upenn.edu/RADQuerier/php/sampleInfo.php?assay_id=8649&&study_id=2424
C57Bl/10 derived non-diabetic mouse strain expressing H2g7.
B10.NOD_H2g7
Tomasz Adamusiak
Jie Zheng
true
MO_548
Jie Zheng
James Malone
Tomasz Adamusiak
A cell type is a distinct morphological or functional form of cell. Examples are epithelial, glial etc.
epithelial, glial.
cell type
large adipocyte
Tomasz Adamusiak
Jie Zheng
Daudi
James Malone
Ele Holloway
A principal or polar form of LEPROSY in which the skin lesions are few and are sharply demarcated. Peripheral nerve involvement is pronounced and may be severe. Unlike lepromatous leprosy (LEPROSY, LEPROMATOUS), the lepromin test is positive. Tuberculoid leprosy is rarely a source of infection to others.[accessedResource: MSH:D015441][accessDate: 10-05-2010]
Leprosies, Neural
Nodular leprosy[accessedResource: SNOMEDCT:70143003][accessDate: 10-05-2010]
Tuberculoid leprosy [type T]
TT - Full tuberculoid leprosy
Leprosy, Neural[accessedResource: MSH:D015441][accessDate: 10-05-2010]
James Malone
Neural Leprosies[accessedResource: MSH:D015441][accessDate: 10-05-2010]
Neural Leprosy
Leprosies, Tuberculoid
Tuberculoid leprosy (disorder)[accessedResource: SNOMEDCT:70143003][accessDate: 10-05-2010]
TT - Full tuberculoid leprosy[accessedResource: SNOMEDCT:70143003][accessDate: 10-05-2010]
Smooth leprosy
Tuberculoid leprosy (disorder)
Tuberculoid Leprosies[accessedResource: MSH:D015441][accessDate: 10-05-2010]
Type TT leprosy
Type TT leprosy[accessedResource: SNOMEDCT:70143003][accessDate: 10-05-2010]
Smooth leprosy[accessedResource: DOID:1025][accessDate: 10-05-2010]
type T leprosy
A principal or polar form of LEPROSY in which the skin lesions are few and are sharply demarcated. Peripheral nerve involvement is pronounced and may be severe. Unlike lepromatous leprosy (LEPROSY, LEPROMATOUS), the lepromin test is positive. Tuberculoid leprosy is rarely a source of infection to others.
type T leprosy[accessedResource: DOID:1025][accessDate: 10-05-2010]
SNOMEDCT:70143003
Leprosy, Macular
ICD9:030.1
MSH:D015441
tuberculoid leprosy
Macular Leprosies[accessedResource: MSH:D015441][accessDate: 10-05-2010]
DOID:1025
Full tuberculoid leprosy
Full tuberculoid leprosy[accessedResource: SNOMEDCT:70143003][accessDate: 10-05-2010]
Nodular leprosy
Tuberculoid leprosy [type T][accessedResource: ICD9:030.1][accessDate: 10-05-2010]
Macular Leprosy[accessedResource: MSH:D015441][accessDate: 10-05-2010]
Leprosies, Macular
The assemblage of physical properties or qualities by which male is distinguished from female; the physical difference between male and female; the distinguishing peculiarity of male or female.
An organismal quality inhering in a bearer by virtue of the bearer's ability to undergo sexual reproduction in order to differentiate the individuals or types involved.
PATO:0000047
MO_680
James Malone
The assemblage of physical properties or qualities by which male is distinguished from female; the physical difference between male and female; the distinguishing peculiarity of male or female.[accessedResource: NCIt:C28421][accessDate: 10-05-2010]
NCIt:C28421
Jie Zheng
Term applied to any organism able to undergo sexual reproduction in order to differentiate the individuals or types involved. Sexual reproduction is defined as the ability to exchange genetic material with the potential of recombinant progeny.
Tomasz Adamusiak
sex
An organismal quality inhering in a bearer by virtue of the bearer's ability to undergo sexual reproduction in order to differentiate the individuals or types involved.[accessedResource: PATO:0000047][accessDate: 10-05-2010]
James Malone
MDAMB231
ZFS:0000011
blastula 1k-cell
James Malone
.
respiratory tract
FMAID:7158
EMAPA:16727
AAO:0000541
A system of organs subserving the function of respiration and in air-breathing vertebrates consisting typically of the lungs and their nervous and circulatory supply and the channels by which these are continuous with the outer air.[accessedResource: BTO:0000203][accessDate: 10-05-2010]
respiratory system[accessedResource: BTO:0000203][accessDate: 10-05-2010]
XAO:0000117
respiratory tract[accessedResource: BTO:0000203][accessDate: 10-05-2010]
MA:0000327
Functional system which consists of structures involved in respiration.[accessedResource: FMAID:7158][accessDate: 10-05-2010]
TADS:0000043
Functional system which consists of structures involved in respiration.
TAO:0000272
James Malone
Apparatus respiratorius[accessedResource: FMAID:7158][accessDate: 10-05-2010]
tracheal system[accessedResource: MAT:0000030][accessDate: 10-05-2010]
EHDAA:2203
Apparatus respiratorius
MFO:0003160
respiratory system
EV:0100036
tracheal system
SAEL:90
BTO:0000203
MAT:0000030
A system of organs subserving the function of respiration and in air-breathing vertebrates consisting typically of the lungs and their nervous and circulatory supply and the channels by which these are continuous with the outer air.
FBbt:00005024
respiratory system structure
.[accessedResource: FBbt:00005024][accessDate: 10-05-2010]
[H][C@]12[C@H](OC(=O)c3ccccc3)[C@]3(O)C[C@H](OC(=O)[C@H](O)[C@@H](NC(=O)c4ccccc4)c4ccccc4)C(C)=C([C@@H](OC(C)=O)C(=O)[C@]1(C)[C@@H](O)C[C@H]1OC[C@@]21OC(C)=O)C3(C)C
http://www.ebi.ac.uk/efo/EFO_0001622
CHEBI:45863
James Malone
4alpha,10beta-bis(acetyloxy)-13alpha-[(2S,3S)-3-(benzoylamino)-2-hydroxy-3-phenylpropanoyloxy]-1,7beta-dihydroxy-9-oxo-5beta,20-epoxytax-11-en-2alpha-yl benzoate
(2aR-(2aalpha,4beta,4abeta,6beta,9alpha(alpha R*,betaS*),11alpha,12alpha,12balpha))-beta-(Benzoylamino)-alpha-hydroxybenzenepropanoic acid 6,12b-bis(acetyloxy)-12-(benzoyloxy)-2a,3,4,4a,5,6,9,10,11,12,12a,12b-dodecahydro-4,11-dihydroxy-4a,8,13,13-tetramethyl-5-oxo-7,11-methano-1H-cyclodeca(3,4)benz(1,2-b)oxet-9-yl ester
Taxol A
5beta,20-Epoxy-1,2-alpha,4,7beta,10beta,13alpha-hexahydroxytax-11-en-9-one 4,10-diacetate 2-benzoate 13-ester with (2R,3S)-N-benzoyl-3-phenylisoserine
InChIKey=RCINICONZNJXQF-GXKQXQCDDN
Paclitaxel
Antineoplastic agent isolated from the bark of the Pacific yew tree, Taxus brevifolia.
InChI=1/C47H51NO14/c1-25-31(60-43(56)36(52)35(28-16-10-7-11-17-28)48-41(54)29-18-12-8-13-19-29)23-47(57)40(61-42(55)30-20-14-9-15-21-30)38-45(6,32(51)22-33-46(38,24-58-33)62-27(3)50)39(53)37(59-26(2)49)34(25)44(47,4)5/h7-21,31-33,35-38,40,51-52,57H,22-24H2,1-6H3,(H,48,54)/t31-,32-,33+,35-,36+,37+,38-,40-,45+,46-,47+/m0/s1/f/h48H
taxol
C47H51NO14
An experiment where proteins in a sample are detected, quantified or otherwise analysed, e.g. antibody profiling using an array based technology
proteomic profiling by array
MA:0000717
cardiovascular system endothelium
Tomasz Adamusiak
Jie Zheng
fibroma
Front part of the brain; involved in planning, organizing, problem solving, selective attention, personality and a variety of "higher cognitive functions" including behavior and emotions.[accessedResource: BTO:0000484][accessDate: 10-05-2010]
Front part of the brain; involved in planning, organizing, problem solving, selective attention, personality and a variety of "higher cognitive functions" including behavior and emotions.
Anterior portion of the frontal cortex, lying anterior to the central sulcus in humans. It is bounded by the parietal cortex posteriorly and the temporal cortex laterally.[accessedResource: NIFSTD:nlx_anat_20090601][accessDate: 10-05-2010]
NIFSTD:nlx_anat_20090601
Tomasz Adamusiak
Frontal region
frontal lobe
Frontal region[accessedResource: FMAID:61824][accessDate: 10-05-2010]
Frontal lobe is the anterior-most of five lobes of the cerebral hemisphere. It is bounded by the central sulcus on its posterior border and by the longitudinal cerebral fissure on its medial border.
Frontal cortex
MAT:0000505
Frontal lobe is the anterior-most of five lobes of the cerebral hemisphere. It is bounded by the central sulcus on its posterior border and by the longitudinal cerebral fissure on its medial border.[accessedResource: FMAID:61824][accessDate: 10-05-2010]
BTO:0000484
Anterior portion of the frontal cortex, lying anterior to the central sulcus in humans. It is bounded by the parietal cortex posteriorly and the temporal cortex laterally.
frontal cortex[accessedResource: BTO:0000484][accessDate: 10-05-2010]
James Malone
[accessedResource: NIFSTD:birnlex_928][accessDate: 10-05-2010]
FMAID:61824
EV:0100167
NIFSTD:birnlex_928
James Malone
The back; especially : the entire dorsal surface of an animal.[accessedResource: BTO:0001713][accessDate: 10-05-2010]
dorsum[accessedResource: BTO:0001713][accessDate: 10-05-2010]
NCIt:C13062
BTO:0001713
Back of body proper[accessedResource: FMAID:14181][accessDate: 10-05-2010]
dorsum
The dorsal area between the base of the neck and the sacrum.[accessedResource: NCIt:C13062][accessDate: 10-05-2010]
FMAID:14181
The dorsal area between the base of the neck and the sacrum.
back
Back of body proper
The back; especially : the entire dorsal surface of an animal.
Jie Zheng
James Malone
organization
An organization is a continuant entity which can play roles, has members, and has a set of organization rules. Members of organizations are either organizations themselves or individual people. Members can bear specific organization member roles that are determined in the organization rules. The organization rules also determine how decisions are made on behalf of the organization by the organization members.
MO_177
organisation
http://www.ebi.ac.uk/efo/EFO_0002010
Tomasz Adamusiak
http://www.cbil.upenn.edu/RAD/DGAP/php/displayStudy.php?study_id=2340&&download=1#study2340
Mouse strain with deficiency of the leptin gene (ObOb).
ObOb
Tomasz Adamusiak
Jie Zheng
GM07056
James Malone
BC-5
James Malone
Ele Holloway
Organ with organ cavity which connects the renal sinus to the urinary bladder. Examples: There are only two ureters, the right and the left ureters.[accessedResource: FMAID:9704][accessDate: 10-05-2010]
James Malone
EMAPA:17950
EHDAA:7009
The tube that carries urine from the kidney to the bladder.[accessedResource: BTO:0001409][accessDate: 10-05-2010]
EV:0100097
BTO:0001409
FMAID:9704
MA:0000378
Organ with organ cavity which connects the renal sinus to the urinary bladder. Examples: There are only two ureters, the right and the left ureters.
The tube that carries urine from the kidney to the bladder.
WBbt:0005777
WBbt:0004540
XAO:0000144
ureter
Ele Holloway
Pituitary adenoma, no ICD-O subtype (morphologic abnormality)
pituitary adenoma
Pituitary adenoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:3829][accessDate: 10-05-2010]
DOID:3829
Tomasz Adamusiak
adenoma of the Pituitary gland[accessedResource: DOID:3829][accessDate: 10-05-2010]
adenoma of the Pituitary gland
Pituitary adenoma (disorder)[accessedResource: DOID:3829][accessDate: 10-05-2010]
Pituitary adenoma (disorder)
James Malone
BTO:0000575
hepatocyte
CL:0000182
The main structural component of the liver. They are specialized epithelial cells that are organized into interconnected plates called lobules.[accessedResource: CL:0000182][accessDate: 10-05-2010]
A liver cell.
A liver cell.[accessedResource: BTO:0000575][accessDate: 10-05-2010]
The main structural component of the liver. They are specialized epithelial cells that are organized into interconnected plates called lobules.
A male organ of copulation that in male mammals including humans usually functions as the channel by which urine leaves the body.
phallus
A male organ of copulation that in male mammals including humans usually functions as the channel by which urine leaves the body.[accessedResource: BTO:0000405][accessDate: 10-05-2010]
Distal part of the aedeagus consisting of a median, scleratised, pointed lobe through which the ejaculatory duct discharges.
FBbt:00004852
EMAPA:18682
Distal part of the aedeagus consisting of a median, scleratised, pointed lobe through which the ejaculatory duct discharges.[accessedResource: FBbt:00004852][accessDate: 10-05-2010]
MA:0000408
BTO:0000405
MAT:0000186
penis
EHDAA:9380
FMAID:9707
James Malone
EV:0100107
SAEL:80
phallus[accessedResource: FBbt:00004852][accessDate: 10-05-2010]
AsPC1
James Malone
Ele Holloway
RPMI8226
James Malone
Ele Holloway
SNOMEDCT:254915003
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.[accessedResource: DOID:4467][accessDate: 10-05-2010]
Carcinoma, Nephroid
Clear Cell Renal Cell Carcinoma
DOID:4467
James Malone
Clear Cell Adenocarcinoma of Kidney
Hypernephroma
Clear cell carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
NCIt:C4033
Carcinomas, Collecting Duct (Kidney)
GeneRIF:15062033
MSH:D002292
GeneRIF:15709172
Adenocarcinoma of kidney
Carcinoma of kidney
Papillary Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Clear cell carcinoma of kidney (disorder)[accessedResource: DOID:4467][accessDate: 10-05-2010]
Hypernephroid Carcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Adenocarcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Renal Clear Cell Adenocarcinoma
Grawitz tumour
Hypernephroid Carcinoma
Tumor, Grawitz
Conventional (Clear Cell) Renal Cell Adenocarcinoma
Kidney Clear Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Carcinoma, Collecting Duct (Kidney)
conventional (Clear cell) renal cell carcinoma
Hypernephroid Carcinomas
Conventional (Clear Cell) Renal Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Kidney Clear Cell Carcinoma
Kidney Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Duct Carcinoma, Collecting (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
conventional (Clear cell) renal cell carcinoma[accessedResource: DOID:4467][accessDate: 10-05-2010]
conventional renal cell carcinoma
Nephroid Carcinomas
Renal Cell Adenocarcinomas
Carcinomas, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephroma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
Conventional Renal Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Clear Cell Adenocarcinoma of Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Carcinomas, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Cell Carcinomas
Clear cell carcinoma of kidney is a renal cell carcinoma described as the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
Hypernephromas
Clear Cell Carcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Chromophobe Renal Cell Carcinoma
Clear Cell Renal Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Carcinoma, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Adenocarcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
clear cell renal carcinoma
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.
Grawitz tumour[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Sarcomatoid Renal Cell Carcinoma
Clear Cell Adenocarcinoma, Kidney
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephromas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
GeneRIF:12576453
Renal Cell Adenocarcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophobe Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:14550470
Clear cell carcinoma of kidney (disorder)
Sarcomatoid Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Clear Cell Carcinoma of the Kidney
Collecting Duct Carcinomas (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Adenocarcinoma, Renal Cell
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.
Clear Cell Adenocarcinoma of the Kidney
clear cell carcinoma of kidney
Clear Cell Adenocarcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Hypernephroid Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Grawitz Tumor[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Carcinoma, Renal Cell
Papillary Renal Cell Carcinoma
Natural Language Generator 8th April 2010
LC-1F
Ele Holloway
James Malone
A LC-1F is a cell line.
A LC-1F is both something that is bearer of a squamous cell lung carcinoma, and something that derives from
a Homo sapiens.
MAT:0000479
cranial placodes
A placode is a tissue modifier describing the thickening of embryonic ectoderm from which a definitive structure develops. For example, the cranial placodes.
placode
James Malone
DOID:2694
CMF - Chondromyxoid fibroma
Chondromyxoid fibroma (morphologic abnormality)[accessedResource: DOID:2694][accessDate: 10-05-2010]
An uncommon benign neoplasm arising from the bone. It is characterized by the presence of spindle-shaped or stellate chondrocytes, a lobulated growth pattern, myxoid stroma formation, and sometimes multinucleated giant cells. It has been associated with chromosomal rearrangement of 6q13 and 6q25 bands. The most common clinical symptom is mild, localized pain.[accessedResource: NCIt:C3830][accessDate: 10-05-2010]
James Malone
SNOMEDCT:39553005
Chondromyxoid fibroma (morphologic abnormality)
chondromyxoid fibroma
An uncommon benign neoplasm arising from the bone. It is characterized by the presence of spindle-shaped or stellate chondrocytes, a lobulated growth pattern, myxoid stroma formation, and sometimes multinucleated giant cells. It has been associated with chromosomal rearrangement of 6q13 and 6q25 bands. The most common clinical symptom is mild, localized pain.
NCIt:C3830
CMF - Chondromyxoid fibroma[accessedResource: SNOMEDCT:39553005][accessDate: 10-05-2010]
InChI=1/Fe
InChIKey=XEEYBQQBJWHFJM-UHFFFAOYAG
Fe
http://www.ebi.ac.uk/efo/EFO_0002410
ferrum
CHEBI:18248
James Malone
An iron group element that has formula Fe.
Eisen
fer
iron atom
Ele Holloway
An iron group element atom that has formula Fe.
26Fe
iron
hierro
GM12892
A GM12892 is a cell line.
A GM12892 is all of the following: something that has as quality a female, something that derives from Homo sapiens, and something that derives from a b cell.
Natural Language Generator 8th April 2010
James Malone
characterization of functional areas of human genome
Tha HapMap Project webpage <http://hapmap.ncbi.nlm.nih.gov>
The International HapMap Project is a partnership of scientists and funding agencies from Canada, China, Japan, Nigeria, the United Kingdom and the United States to develop a public resource that will help researchers find genes associated with human disease and response to pharmaceuticals.
The International HapMap Project
James Malone
WM115
James Malone
Ele Holloway
A data transformation is a process which produces output data from input data
data processing
http://www.ebi.ac.uk/efo/EFO_0000393
data analysis
A data transformation is a process which produces output data from input data - e.g. the application of a clustering protocol to microarray data or the application of a statistical testing method on a primary data set to determine a p-value.
James Malone
OBI_0200000
data transformation
http://www.arabidopsis.org/servlets/TairObject?id=1005158751&type=germplasm
CS57727 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158751&type=germplasm
CS57727
James Malone
NCIH358
James Malone
Ele Holloway
MOLT4
MOLT-4
James Malone
2-chloro-2-difluoromethoxy-1,1,1-trifluoroethane
James Malone
An organofluorine compound that has formula C3H2ClF5O.
InChI=1/C3H2ClF5O/c4-1(3(7,8)9)10-2(5)6/h1-2H
isofluranum
1-chloro-2,2,2-trifluoroethyl difluoromethyl ether
Ethane
InChIKey=PIWKPBJCKXDKJR-UHFFFAOYAP
http://www.ebi.ac.uk/efo/EFO_0001559
CHEBI:6015
isoflurano
isoflurane
FC(F)OC(Cl)C(F)(F)F
Aerrane
Forane
Forene
C3H2ClF5O
DOID:2608
phyllodes tumor
Phyllodes neoplasm[accessedResource: DOID:2608][accessDate: 10-05-2010]
Phyllodes tumor, borderline[accessedResource: SNOMEDCT:71232009][accessDate: 10-05-2010]
Cystosarcoma Phyllodes[accessedResource: MSH:D003557][accessDate: 10-05-2010]
[M]Cystosarcoma phyllodes NOS (morphologic abnormality)
Cystosarcoma phyllodes NOS (morphologic abnormality)[accessedResource: DOID:2608][accessDate: 10-05-2010]
MSH:D003557
Phyllodes Neoplasm
Cystosarcoma phyllodes, NOS[accessedResource: SNOMEDCT:71232009][accessDate: 10-05-2010]
Phyllodes tumor, NOS[accessedResource: SNOMEDCT:71232009][accessDate: 10-05-2010]
Phyllodes tumour
NCIt:C2977
Phyllodes Tumors
Cystosarcoma phyllodes, NOS
Malignant Cystosarcoma Phyllodes
[M]Cystosarcoma phyllodes NOS[accessedResource: SNOMEDCT:189825002][accessDate: 10-05-2010]
SNOMEDCT:71232009
A type of connective tissue neoplasm arising from intralobular stroma of the BREAST. It is characterized by the rapid enlargement of an asymmetric firm mobile mass. Histologically, its leaf-like stromal clefts are lined by EPITHELIAL CELLS.[accessedResource: MSH:D003557][accessDate: 10-05-2010]
Phyllodes Tumors[accessedResource: MSH:D003557][accessDate: 10-05-2010]
Phyllodes tumor, borderline
A type of connective tissue neoplasm arising from intralobular stroma of the BREAST. It is characterized by the rapid enlargement of an asymmetric firm mobile mass. Histologically, its leaf-like stromal clefts are lined by EPITHELIAL CELLS.
Phyllodes tumour[accessedResource: SNOMEDCT:71232009][accessDate: 10-05-2010]
James Malone
[M]Cystosarcoma phyllodes NOS
Cystosarcoma phyllodes
Phyllodes tumor, NOS
[M]Cystosarcoma phyllodes NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189825002][accessDate: 10-05-2010]
GeneRIF:15044924
Cystosarcoma phyllodes NOS (morphologic abnormality)
Phyllodes tumour, borderline
A benign, borderline, or malignant fibroepithelial neoplasm arising from the breast and rarely the prostate gland. It may recur following resection. The recurrence rates are higher for borderline and malignant phyllodes tumors. In borderline and malignant phyllodes tumors metastases to distant anatomic sites can occur. The incidence of metastases is higher in malignant phyllodes tumors.
Phyllodes tumor, borderline (morphologic abnormality)[accessedResource: SNOMEDCT:71232009][accessDate: 10-05-2010]
Phyllodes tumor, borderline (morphologic abnormality)
SNOMEDCT:189825002
Phyllodes tumour, borderline[accessedResource: SNOMEDCT:71232009][accessDate: 10-05-2010]
Cystosarcoma Phylloides
Cystosarcoma Phylloides[accessedResource: MSH:D003557][accessDate: 10-05-2010]
A benign, borderline, or malignant fibroepithelial neoplasm arising from the breast and rarely the prostate gland. It may recur following resection. The recurrence rates are higher for borderline and malignant phyllodes tumors. In borderline and malignant phyllodes tumors metastases to distant anatomic sites can occur. The incidence of metastases is higher in malignant phyllodes tumors.[accessedResource: NCIt:C2977][accessDate: 10-05-2010]
Malignant Cystosarcoma Phyllodes[accessedResource: MSH:D003557][accessDate: 10-05-2010]
James Malone
lateral geniculate nucleus
Lateral geniculate body
MA:0000869
Lateral geniculate body[accessedResource: FMA:62209][accessDate: 10-05-2010]
Lateral geniculate complex[accessedResource: FMA:62209][accessDate: 10-05-2010]
FMA:62209
Lateral geniculate complex
Narcoleptic Syndromes
Syndrome, Narcolepsy-Cataplexy
Narcolepsy NOS[accessedResource: DOID:8986][accessDate: 10-05-2010]
Narcolepsy NOS
Syndrome, Narcoleptic[accessedResource: MSH:D009290][accessDate: 10-05-2010]
GeneRIF:12601524
DOID:8986
Narcolepsy Cataplexy Syndrome[accessedResource: MSH:D009290][accessDate: 10-05-2010]
GeneRIF:14769912
A condition characterized by recurrent episodes of daytime somnolence and lapses in consciousness (microsomnias) that may be associated with automatic behaviors and AMNESIA. CATAPLEXY; SLEEP PARALYSIS, and hypnagogic HALLUCINATIONS frequently accompany narcolepsy. The pathophysiology of this disorder includes sleep-onset rapid eye movement (REM) sleep, which normally follows stage III or IV sleep. (From Neurology 1998 Feb;50(2 Suppl 1):S2-S7)[accessedResource: MSH:D009290][accessDate: 10-05-2010]
GeneRIF:15453542
Syndrome, Narcoleptic
Syndromes, Gelineau's
GeneRIF:15070772
Narcolepsy (disorder)
narcolepsy
James Malone
Narcolepsy, without cataplexy[accessedResource: DOID:8986][accessDate: 10-05-2010]
A condition characterized by recurrent episodes of daytime somnolence and lapses in consciousness (microsomnias) that may be associated with automatic behaviors and AMNESIA. CATAPLEXY; SLEEP PARALYSIS, and hypnagogic HALLUCINATIONS frequently accompany narcolepsy. The pathophysiology of this disorder includes sleep-onset rapid eye movement (REM) sleep, which normally follows stage III or IV sleep. (From Neurology 1998 Feb;50(2 Suppl 1):S2-S7)
GeneRIF:15985489
paroxysmal sleep
ICD9:347.0
Narcolepsy (disorder)[accessedResource: DOID:8986][accessDate: 10-05-2010]
GeneRIF:11796186
Syndromes, Narcolepsy-Cataplexy[accessedResource: MSH:D009290][accessDate: 10-05-2010]
Narcolepsy, without cataplexy
Gelineaus Syndrome[accessedResource: MSH:D009290][accessDate: 10-05-2010]
Syndromes, Gelineau's[accessedResource: MSH:D009290][accessDate: 10-05-2010]
MSH:D009290
Syndrome, Gelineau[accessedResource: MSH:D009290][accessDate: 10-05-2010]
Syndrome, Gelineau's
Syndromes, Narcoleptic[accessedResource: MSH:D009290][accessDate: 10-05-2010]
GeneRIF:15091316
GeneRIF:12414876
paroxysmal sleep[accessedResource: DOID:8986][accessDate: 10-05-2010]
GeneRIF:12535955
Syndromes, Narcolepsy-Cataplexy
GeneRIF:12823767
GeneRIF:15157381
Syndrome, Gelineau
HP:0008200
DOID:11202
primary hyperparathyroidism (disorder)
primary hyperparathyroidism (disorder)[accessedResource: DOID:11202][accessDate: 10-05-2010]
primary hyperparathyroidism
Tomasz Adamusiak
Ele Holloway
1.8
true
obsolete_THP1
James Malone
duplicate of EFO_0001253
A biological agent that causes disease or illness to its host
pathogen
James Malone
A drug used to treat rheumatoid arthritis.
CHEBI:35842
http://www.ebi.ac.uk/efo/EFO_0001487
James Malone
antirheumatic drugs
antirheumatic agent
anti-rheumatic drugs
antirheumatic drug
CHEBI:35842
Chondroblastoma of bone[accessedResource: DOID:2649][accessDate: 10-05-2010]
James Malone
Chondromatous giant cell tumor
Codman's tumour
Chondroblastoma (morphologic abnormality)
Chondroblastoma, NOS
SNOMEDCT:189887007
MSH:D002804
Chondromatous giant cell tumor[accessedResource: SNOMEDCT:9001003][accessDate: 10-05-2010]
DOID:2649
chondroblastoma
Codman's tumor
Chondroblastomas
NCIt:C2945
A usually benign tumor composed of cells which arise from chondroblasts or their precursors and which tend to differentiate into cartilage cells. It occurs primarily in the epiphyses of adolescents. It is relatively rare and represents less than 2% of all primary bone tumors. The peak incidence is in the second decade of life; it is about twice as common in males as in females. (From Dorland, 27th ed; Holland et al., Cancer Medicine, 3d ed, p1846)
[M]Chondroblastoma NOS
[M]Chondroblastoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189887007][accessDate: 10-05-2010]
Chondroblastoma morphology[accessedResource: SNOMEDCT:9001003][accessDate: 10-05-2010]
Chondroblastoma NOS (morphologic abnormality)[accessedResource: DOID:2649][accessDate: 10-05-2010]
Chondromatous giant cell tumour
Chondroblastoma (morphologic abnormality)[accessedResource: DOID:2649][accessDate: 10-05-2010]
A benign, lytic neoplasm usually arising from the cartilage in epiphysis and metaphysis of bone. It is a well circumscribed tumor characterized by the presence of chondroblasts, osteoclast-like giant cells, myxoid stroma formation, calcification, and mitotic activity. In aggressive cases, there is rearrangement of the 8q21 chromosome band. The tumor occurs most frequently in children and young adults.[accessedResource: NCIt:C2945][accessDate: 10-05-2010]
[M]Chondroblastoma NOS[accessedResource: SNOMEDCT:189887007][accessDate: 10-05-2010]
Chondroblastoma NOS (morphologic abnormality)
Codman's tumor[accessedResource: SNOMEDCT:9001003][accessDate: 10-05-2010]
GeneRIF:13680221
Chondroblastoma, NOS[accessedResource: SNOMEDCT:9001003][accessDate: 10-05-2010]
[M]Chondroblastoma NOS (morphologic abnormality)
A benign, lytic neoplasm usually arising from the cartilage in epiphysis and metaphysis of bone. It is a well circumscribed tumor characterized by the presence of chondroblasts, osteoclast-like giant cells, myxoid stroma formation, calcification, and mitotic activity. In aggressive cases, there is rearrangement of the 8q21 chromosome band. The tumor occurs most frequently in children and young adults.
Chondroblastoma morphology
Chondromatous giant cell tumour[accessedResource: SNOMEDCT:9001003][accessDate: 10-05-2010]
Chondroblastomas[accessedResource: MSH:D002804][accessDate: 10-05-2010]
SNOMEDCT:9001003
A usually benign tumor composed of cells which arise from chondroblasts or their precursors and which tend to differentiate into cartilage cells. It occurs primarily in the epiphyses of adolescents. It is relatively rare and represents less than 2% of all primary bone tumors. The peak incidence is in the second decade of life; it is about twice as common in males as in females. (From Dorland, 27th ed; Holland et al., Cancer Medicine, 3d ed, p1846)[accessedResource: MSH:D002804][accessDate: 10-05-2010]
Codman's tumour[accessedResource: SNOMEDCT:9001003][accessDate: 10-05-2010]
Chondroblastoma of bone
Juvenile rheumatoid arthritis (disorder)[accessedResource: DOID:677][accessDate: 10-05-2010]
Juvenile idiopathic arthritis (disorder)
Juvenile rheumatoid a.
Ele Holloway
juvenile arthritis[accessedResource: DOID:677][accessDate: 10-05-2010]
DOID:677
Juvenile rheumatoid arthritis NOS (disorder)[accessedResource: DOID:677][accessDate: 10-05-2010]
Juvenile seropositive polyarthritis[accessedResource: DOID:677][accessDate: 10-05-2010]
Juvenile rheumatoid a.[accessedResource: DOID:677][accessDate: 10-05-2010]
Juvenile rheumatoid arthritis NOS[accessedResource: DOID:677][accessDate: 10-05-2010]
Juvenile rheumatoid arthritis (disorder)
Juvenile Rheumatoid Arthritis[accessedResource: DOID:677][accessDate: 10-05-2010]
Juvenile chronic arthritis (disorder)
Juvenile rheumatoid arthritis NOS (disorder)
Juvenile Rheumatoid Arthritis
Juvenile seropositive polyarthritis
juvenile arthritis
Tomasz Adamusiak
Juvenile chronic arthritis (disorder)[accessedResource: DOID:677][accessDate: 10-05-2010]
Juvenile rheumatoid arthritis NOS
Juvenile idiopathic arthritis (disorder)[accessedResource: DOID:677][accessDate: 10-05-2010]
chronic childhood arthritis
NCIt:C2855
A neoplasm arising from the epithelium. It may be encapsulated or non-encapsulated but non-invasive. The neoplastic epithelial cells may or may not display cellular atypia or dysplasia. In the gastrointestinal tract, when dysplasia becomes severe it is sometimes called carcinoma in situ. Representative examples are pituitary gland adenoma, follicular adenoma of the thyroid gland, and adenomas (or adenomatous polyps) of the gastrointestinal tract.
A neoplasm arising from the epithelium. It may be encapsulated or non-encapsulated but non-invasive. The neoplastic epithelial cells may or may not display cellular atypia or dysplasia. In the gastrointestinal tract, when dysplasia becomes severe it is sometimes called carcinoma in situ. Representative examples are pituitary gland adenoma, follicular adenoma of the thyroid gland, and adenomas (or adenomatous polyps) of the gastrointestinal tract.[accessedResource: NCIt:C2855][accessDate: 10-05-2010]
adenoma
James Malone
RAW264.7
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158572&type=germplasm
CS57548 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158572&type=germplasm
CS57548
James Malone
A lateral outgrowth from a plant stem that is typically a flattened expanded variably shaped greenish organ, constitutes a unit of the foliage, and functions primarily in food manufacture by photosynthesis.[accessedResource: BTO:0000713][accessDate: 10-05-2010]
1.8
leaf of a moss or liverwort[accessedResource: MAT:0000276][accessDate: 10-05-2010]
obsolete_phyllid
BTO:0000713
GRO:0005306[accessedResource: BTO:0000713][accessDate: 10-05-2010]
A lateral outgrowth from a plant stem that is typically a flattened expanded variably shaped greenish organ, constitutes a unit of the foliage, and functions primarily in food manufacture by photosynthesis.
MAT:0000276
James Malone
leaf of a moss or liverwort
true
leaf[accessedResource: BTO:0000713][accessDate: 10-05-2010]
GRO:0005306
leaf
duplication
A phthalate ester that has formula C16H22O4.
phthalic acid, 2-ethylhexyl ester
(2-ethylhexyl) hydrogen phthalate
http://www.ebi.ac.uk/efo/EFO_0001574
InChIKey=DJDSLBVSSOQSLW-HCKMINDGCL
C16H22O4
2-Ethylhexyl phthalate
InChI=1/C16H22O4/c1-3-5-8-12(4-2)11-20-16(19)14-10-7-6-9-13(14)15(17)18/h6-7,9-10,12H,3-5,8,11H2,1-2H3,(H,17,18)/f/h17H
1,2-benzenedicarboxylic acid, mono(2-ethylhexyl) ester
monoethylhexyl phthalate
2-([(2-ethylhexyl)oxy]carbonyl)benzoic acid
MEHP
CCCCC(CC)COC(=O)c1ccccc1C(O)=O
mono-2-ethylhexyl phthalate
2-(2-ethylhexyloxycarbonyl)benzoic acid
CHEBI:17243
FMAID:3786
Thoracic part of aorta
Thoracic part of aorta[accessedResource: FMAID:3786][accessDate: 10-05-2010]
thoracic aorta
Tomasz Adamusiak
Jie Zheng
EV:0100106
MAT:0000171
Either of a pair of glandular pouches that lie one on either side of the male reproductive tract and in the human male secrete a sugar- and protein-containing fluid into the ejaculatory duct.
James Malone
glandula seminalis
vas efferens
Seminal gland
seminal vesicle
FBbt:00004958
glandula vesiculosa[accessedResource: BTO:0001234][accessDate: 10-05-2010]
BTO:0001234
vas efferens[accessedResource: FBbt:00004958][accessDate: 10-05-2010]
Seminal gland[accessedResource: FMAID:19386][accessDate: 10-05-2010]
vesicula seminalis[accessedResource: BTO:0001234][accessDate: 10-05-2010]
vesicula seminalis
glandula seminalis[accessedResource: BTO:0001234][accessDate: 10-05-2010]
glandula vesiculosa
Either of a pair of glandular pouches that lie one on either side of the male reproductive tract and in the human male secrete a sugar- and protein-containing fluid into the ejaculatory duct.[accessedResource: BTO:0001234][accessDate: 10-05-2010]
FMAID:19386
true
UO:0000046
http://www.ebi.ac.uk/efo/EFO_0001692
A unit which is derived from base units.
A derived unit is a unit which is derived from base units.
derived unit
James Malone
HT-3
HT3
James Malone
Ele Holloway
NIFSTD:birnlex_695
NIFSTD:birnlex_438
MIAA:0000402
infant
Tomasz Adamusiak
James Malone
NCIt:C33223
organ of corti
The organ, resting on the basilar membrane in the cochlear duct, that contains the special sensory receptors for hearing; it consists of neuroepithelial hair cells and several types of supporting cells, including the inner and outer pillar cells, inner and outer phalangeal cells, border cells, and Hensen's cells.
basilar papilla
BTO:0001691
Corti's organ
James Malone
Corti's organ[accessedResource: BTO:0001691][accessDate: 10-05-2010]
organum spirale[accessedResource: BTO:0001691][accessDate: 10-05-2010]
Spiral Organ of Corti[accessedResource: NCIt:C33223][accessDate: 10-05-2010]
Spiral Organ of Corti
spiral organ[accessedResource: BTO:0001691][accessDate: 10-05-2010]
organum spirale
The organ, resting on the basilar membrane in the cochlear duct, that contains the special sensory receptors for hearing; it consists of neuroepithelial hair cells and several types of supporting cells, including the inner and outer pillar cells, inner and outer phalangeal cells, border cells, and Hensen's cells.[accessedResource: BTO:0001691][accessDate: 10-05-2010]
spiral organ
basilar papilla[accessedResource: BTO:0001691][accessDate: 10-05-2010]
http://jaxmice.jax.org/strain/009289.html
ILSXISS103/TejJ
Tomasz Adamusiak
http://en.wikipedia.org/wiki/Chip-Sequencing
Helen Parkinson
ChIP-seq is an assay in which chromatin immunoprecipitation with high throughput sequencing to identify the cistrome of DNA-associated proteins.
ChIP-seq
DOID:5521
squamous cell carcinoma, keratinizing (morphologic abnormality)
Epidermoid carcinoma, keratinising[accessedResource: SNOMEDCT:18048008][accessDate: 10-05-2010]
[M]Squamous cell carcinoma, keratinising type NOS[accessedResource: SNOMEDCT:18048008][accessDate: 10-05-2010]
Squamous cell carcinomas with morphologically prominent production of keratin.[accessedResource: NCIt:C4105][accessDate: 10-05-2010]
NCIt:C4105
Squamous cell carcinoma, keratinizing, NOS[accessedResource: SNOMEDCT:18048008][accessDate: 10-05-2010]
keratinizing squamous cell carcinoma
SNOMEDCT:18048008
Squamous cell carcinomas with morphologically prominent production of keratin.
Squamous cell carcinoma, keratinizing, NOS
Keratinising squamous cell carcinoma - large cell[accessedResource: SNOMEDCT:18048008][accessDate: 10-05-2010]
Squamous cell carcinoma, large cell, keratinizing
[M]Squamous cell carcinoma, keratinising type NOS
James Malone
Keratinising squamous cell carcinoma
squamous cell carcinoma, keratinizing (morphologic abnormality)[accessedResource: DOID:5521][accessDate: 10-05-2010]
Epidermoid carcinoma, keratinizing[accessedResource: SNOMEDCT:18048008][accessDate: 10-05-2010]
Squamous cell carcinoma, large cell, keratinizing[accessedResource: SNOMEDCT:18048008][accessDate: 10-05-2010]
[M]Squamous cell carcinoma, keratinizing type NOS
Keratinising epidermoid carcinoma
Squamous cell carcinoma, keratinising[accessedResource: SNOMEDCT:18048008][accessDate: 10-05-2010]
[M]Squamous cell carcinoma, keratinizing type NOS[accessedResource: SNOMEDCT:18048008][accessDate: 10-05-2010]
Keratinizing epidermoid carcinoma
Squamous cell carcinoma, large cell, keratinising
adult
EV:0300070
OntologyMappingImporter following MAT:0000403
WBIs:0000041
NIFSTD:birnlex_681
MAT:0000403
James Malone
EVM:2990028
Tomasz Adamusiak
A maturity quality inhering in an individual by virtue of the individual having attained sexual maturity and full growth[accessedResource: NIFSTD:birnlex_681][accessDate: 10-05-2010]
XAO:1000009
NIFSTD:birnlex_228
A maturity quality inhering in an individual by virtue of the individual having attained sexual maturity and full growth
FBdv:00005369
Ele Holloway
James Malone
CAL54
http://jaxmice.jax.org/strain/009261.html
ILSXISS14/TejJ
Tomasz Adamusiak
male genital system
male[accessedResource: MAT:0000029][accessDate: 10-05-2010]
male genitalia
MA:0000396
Gonochoristic organism that can produce male gametes.
FMAID:45664
male genitalia[accessedResource: MAT:0000029][accessDate: 10-05-2010]
EMAPA:17968
TADS:0000460
XAO:0000155
EV:0100101
male
male reproductive system
The reproductive system in men includes the prostate, the testes, and the penis.[accessedResource: BTO:0000082][accessDate: 10-05-2010]
BTO:0000082
EHDAA:8136
ZFA:0000242
MAT:0000029
WBbt:0005574
male genital system[accessedResource: MAT:0000029][accessDate: 10-05-2010]
The reproductive system in men includes the prostate, the testes, and the penis.
Gonochoristic organism that can produce male gametes.[accessedResource: ZFA:0000242][accessDate: 10-05-2010]
James Malone
GeneRIF:12011132
SNOMEDCT:190105009
ICD9:172.3
Malignant Melanoma of Skin
Malignant melanoma of other specified skin site (disorder)[accessedResource: SNOMEDCT:188080004][accessDate: 10-05-2010]
Malignant melanoma of skin, NOS
GeneRIF:15057044
Melanoma of skin, site unspecified
Malignant melanoma of other specified sites of skin
DOID:8923
MALIG MELANOMA SKIN NEC
MALIG MELANOMA SKIN NOS
Malignant Cutaneous Melanoma
SNOMEDCT:188080004
ICD9:172
Malignant melanoma of other specified skin site
MAL MELANOM FACE NEC/NOS
Melanoma of the Skin
[X]Malignant melanoma of skin, unspecified (disorder)
Malignant Melanoma (of Skin), Stage Unspecified
GeneRIF:14714570
GeneRIF:12376526
[X]Malignant melanoma of skin, unspecified[accessedResource: SNOMEDCT:190105009][accessDate: 10-05-2010]
A primary melanoma arising from atypical melanocytes in the skin. Precursor lesions include acquired and congenital melanocytic nevi, and dysplastic nevi. Several histologic variants have been recognized, including superficial spreading melanoma, acral lentiginous melanoma, nodular melanoma, and lentigo maligna melanoma.[accessedResource: NCIt:C3510][accessDate: 10-05-2010]
Malignant melanoma of skin (disorder)
GeneRIF:12067203
ICD9:172.8
Malignant melanoma of other specified skin site (disorder)
Malignant melanoma of skin, NOS[accessedResource: SNOMEDCT:93655004][accessDate: 10-05-2010]
cancer of skin
MM - Malignant melanoma of skin[accessedResource: SNOMEDCT:93655004][accessDate: 10-05-2010]
Melanoma of the Skin[accessedResource: NCIt:C3510][accessDate: 10-05-2010]
Malignant melanoma of skin NOS (disorder)
NCIt:C3510
GeneRIF:12459644
[X]Malignant melanoma of skin, unspecified
MALIG MELANOMA SKIN NOS[accessedResource: ICD9:172.9][accessDate: 10-05-2010]
GeneRIF:15751018
GeneRIF:11841484
Malignant melanoma of skin of other and unspecified parts of face[accessedResource: ICD9:172.3][accessDate: 10-05-2010]
SNOMEDCT:188082007
MM - Malignant melanoma of skin
James Malone
ICD9:172.9
MALIG MELANOMA SKIN NEC[accessedResource: ICD9:172.8][accessDate: 10-05-2010]
GeneRIF:15743033
Skin Melanoma[accessedResource: NCIt:C3510][accessDate: 10-05-2010]
Malignant melanoma of other specified skin site[accessedResource: SNOMEDCT:188080004][accessDate: 10-05-2010]
GeneRIF:12778069
Malignant melanoma of skin NOS (disorder)[accessedResource: SNOMEDCT:188082007][accessDate: 10-05-2010]
Malignant melanoma of skin (disorder)[accessedResource: SNOMEDCT:93655004][accessDate: 10-05-2010]
Melanoma of Skin
A primary melanoma arising from atypical melanocytes in the skin. Precursor lesions include acquired and congenital melanocytic nevi, and dysplastic nevi. Several histologic variants have been recognized, including superficial spreading melanoma, acral lentiginous melanoma, nodular melanoma, and lentigo maligna melanoma.
[X]Malignant melanoma of skin, unspecified (disorder)[accessedResource: SNOMEDCT:190105009][accessDate: 10-05-2010]
Skin, Melanoma
Melanoma of Skin[accessedResource: NCIt:C3510][accessDate: 10-05-2010]
SNOMEDCT:93655004
Malignant melanoma of skin of other and unspecified parts of face
Malignant melanoma of other specified sites of skin[accessedResource: ICD9:172.8][accessDate: 10-05-2010]
Malignant Cutaneous Melanoma[accessedResource: NCIt:C3510][accessDate: 10-05-2010]
cutaneous melanoma
Melanoma of skin, site unspecified[accessedResource: ICD9:172.9][accessDate: 10-05-2010]
Malignant melanoma of skin[accessedResource: SNOMEDCT:93655004][accessDate: 10-05-2010]
Malignant Melanoma of Skin Stage Unspecified[accessedResource: NCIt:C3510][accessDate: 10-05-2010]
MAL MELANOM FACE NEC/NOS[accessedResource: ICD9:172.3][accessDate: 10-05-2010]
SKNDZ
James Malone
Ele Holloway
MO_588
growth condition design
Tomasz Adamusiak
colony forming unit erythroid
erythroid stem cell
colony forming unit erythroid[accessedResource: CL:0000038][accessDate: 10-05-2010]
Tomasz Adamusiak
A progenitor cell committed to the erythroid lineage.[accessedResource: CL:0000038][accessDate: 10-05-2010]
blast forming unit erythroid[accessedResource: CL:0000038][accessDate: 10-05-2010]
burst forming unit erythroid
CL:0000038
erythroid stem cell[accessedResource: CL:0000038][accessDate: 10-05-2010]
blast forming unit erythroid
CFU-E
BFU-E
A progenitor cell committed to the erythroid lineage.
CFU-E[accessedResource: CL:0000038][accessDate: 10-05-2010]
burst forming unit erythroid[accessedResource: CL:0000038][accessDate: 10-05-2010]
erythroid progenitor cell
BFU-E[accessedResource: CL:0000038][accessDate: 10-05-2010]
ArrayExpress production team
An assay where an antigen array is used (antigens deposited on the array) to detect, quantify or otherwise analyse antibodies in solution.
antigen profiling
James Malone
IMR-32
An IMR 32 is a cell line.
An IMR 32 is both something that is bearer of a neuroblastoma, and something that derives from a
neuroblast sensu vertebrata.
Natural Language Generator 8th April 2010
James Malone
precursor B-cell
T-cell neoplasm
neoplasm of immature B and T cells
Tomasz Adamusiak
James Malone
CHEBI:34005
OPDA
12-oxophytodienoic acid
http://www.ebi.ac.uk/efo/EFO_0002482
(9R,13R)-12-oxo-phytodienoic acid
James Malone
Ele Holloway
Human gastric adenocarcinoma, established from the poorly differentiated adenocarcinoma of the stomach (medullary type) of a 62-year-old woman.[accessedResource: BTO:0001225][accessDate: 10-05-2010]
MKN45 cell
MKN-45 cell[accessedResource: BTO:0001225][accessDate: 10-05-2010]
JCRB0254
James Malone
MKN45 cell[accessedResource: BTO:0001225][accessDate: 10-05-2010]
MKN-45
Human gastric adenocarcinoma, established from the poorly differentiated adenocarcinoma of the stomach (medullary type) of a 62-year-old woman.
MKN45
BTO:0001225
MKN-45 cell
Ele Holloway
true
The genotype of the individual organism from which the biomaterial was derived. Individual genetic characteristics include polymorphisms, disease alleles, and haplotypes.
obsolete_individual genetic characteristic
SW1463
James Malone
Ele Holloway
KLE
James Malone
Ele Holloway
An epidermal cell which synthesizes keratin and undergoes a characteristic change as it moves upward from the basal layers of the epidermis to the cornified (horny) layer of the skin. Successive stages of differentiation of the keratinocytes forming the epidermal layers are basal cell, spinous or prickle cell, and the granular cell.
James Malone
Skin cell, of the keratinized layer of epidermis: its characteristic intermediate filament protein is cytokeratin.
CL:0000312
An epidermal cell which synthesizes keratin and undergoes a characteristic change as it moves upward from the basal layers of the epidermis to the cornified (horny) layer of the skin. Successive stages of differentiation of the keratinocytes forming the epidermal layers are basal cell, spinous or prickle cell, and the granular cell.[accessedResource: CL:0000312][accessDate: 10-05-2010]
Skin cell, of the keratinized layer of epidermis: its characteristic intermediate filament protein is cytokeratin.[accessedResource: BTO:0000667][accessDate: 10-05-2010]
malpighian cell
malpighian cell[accessedResource: CL:0000312][accessDate: 10-05-2010]
keratinocyte
BTO:0000667
Drug resistance to insulin (disorder)
diminished effectiveness of insulin in lowering plasma glucose levels
diminished effectiveness of insulin in lowering plasma glucose levels[accessedResource: MP:0005331][accessDate: 10-05-2010]
insulin resistance
DOID:2017
HP:0000855
Drug resistance to insulin (disorder)[accessedResource: DOID:2017][accessDate: 10-05-2010]
MP:0005331
Tomasz Adamusiak
Ele Holloway
BTO:0000212
A centrally-located portion of the brain affected by Huntington's Disease. The putamen is structurally similar to the caudate nucleus together with which it composes what is termed the striatum.
A centrally-located portion of the brain affected by Huntington's Disease. The putamen is structurally similar to the caudate nucleus together with which it composes what is termed the striatum.[accessedResource: BTO:0000212][accessDate: 10-05-2010]
caudate putamen
James Malone
A human embryonal carcinoma (EC) stem cell line used as a model system for the study of neuronal differentiation and differentiated into neuronal like cells
NTera2 derived dopaminergic neuronal like cells
dendritic cell-derived osteoclast
Strain or line specific to yeast
yeast
James Malone
N-(3-chloro-4-((3-fluorophenyl)methoxy)phenyl)-6-(5-(((2-(methylsulfonyl)ethyl)amino)methyl)-2-furanyl)-4-quinazolinamine
N-[3-chloro-4-(3-fluorobenzyloxy)phenyl]-6-[5-({[2-(methanesulfonyl)ethyl]amino}methyl)furan-2-yl]quinazolin-4-amine
N-{3-CHLORO-4-[(3-FLUOROBENZYL)OXY]PHENYL}-6-[5-({[2-(METHYLSULFONYL)ETHYL]AMINO}METHYL)-2-FURYL]-4-QUINAZOLINAMINE
C29H26ClFN4O4S
http://www.ebi.ac.uk/efo/EFO_0001562
lapatinib
CS(=O)(=O)CCNCc1ccc(o1)-c1ccc2ncnc(Nc3ccc(OCc4cccc(F)c4)c(Cl)c3)c2c1
A quinazoline that has formula C29H26ClFN4O4S.
CHEBI:49603
GW 572016
InChI=1/C29H26ClFN4O4S/c1-40(36,37)12-11-32-16-23-7-10-27(39-23)20-5-8-26-24(14-20)29(34-18-33-26)35-22-6-9-28(25(30)15-22)38-17-19-3-2-4-21(31)13-19/h2-10,13-15,18,32H,11-12,16-17H2,1H3,(H,33,34,35)/f/h35H
Tykerb
InChIKey=BCFGMOOMADDAQU-CSKMVECVCB
Sarcoidoses[accessedResource: MSH:D012507][accessDate: 10-05-2010]
Boecks Disease
GeneRIF:14597055
Disease, Schaumann[accessedResource: MSH:D012507][accessDate: 10-05-2010]
An idiopathic inflammatory disorder characterized by the formation of non-necrotizing epithelioid granulomas which contain giant cells. It usually affects the lungs, lymph nodes, liver, and skin.
GeneRIF:15332393
GeneRIF:12091241
BESNIER BOECK DIS[accessedResource: MSH:D012507][accessDate: 10-05-2010]
Sarcoidoses
GeneRIF:14601651
DOID:11335
An idiopathic systemic inflammatory granulomatous disorder comprised of epithelioid and multinucleated giant cells with little necrosis. It usually invades the lungs with fibrosis and may also involve lymph nodes, skin, liver, spleen, eyes, phalangeal bones, and parotid glands.
Miliary lupoid of Boeck
Boeck Sarcoid, any site[accessedResource: DOID:11335][accessDate: 10-05-2010]
Boeck Sarcoid, any site
Benign lymphogranulomatosis of Schaumann[accessedResource: SNOMEDCT:31541009][accessDate: 10-05-2010]
Miliary lupoid of Boeck[accessedResource: SNOMEDCT:31541009][accessDate: 10-05-2010]
GeneRIF:16053028
Darier-Roussy sarcoid[accessedResource: SNOMEDCT:31541009][accessDate: 10-05-2010]
SCHAUMANN DIS
Sarcoidosis (disorder)
Schaumann's Syndromes
GeneRIF:12180727
Uveoparotid fever
Boeck's Sarcoid
GeneRIF:14551164
GeneRIF:15459013
Schaumann Syndrome[accessedResource: MSH:D012507][accessDate: 10-05-2010]
Boecks Disease[accessedResource: MSH:D012507][accessDate: 10-05-2010]
GeneRIF:15750046
GeneRIF:15004750
GeneRIF:12366781
Boeck's sarcoidosis
GeneRIF:16236915
GeneRIF:12047365
Uveoparotid fever[accessedResource: SNOMEDCT:31541009][accessDate: 10-05-2010]
Sarcoidosis, NOS
James Malone
Besnier-Boeck Disease
Boeck Disease[accessedResource: MSH:D012507][accessDate: 10-05-2010]
Boeck's sarcoidosis[accessedResource: SNOMEDCT:31541009][accessDate: 10-05-2010]
Darier-Roussy sarcoid
Benign lymphogranulomatosis of Schaumann
Syndrome, Schaumann
Sarcoidosis (disorder)[accessedResource: SNOMEDCT:31541009][accessDate: 10-05-2010]
Boeck Sarcoid
Boeck Disease
Besnier-Boeck Disease[accessedResource: MSH:D012507][accessDate: 10-05-2010]
Syndrome, Schaumann's
Disease, Schaumann
Boeck Sarcoid[accessedResource: MSH:D012507][accessDate: 10-05-2010]
GeneRIF:15019280
GeneRIF:15083893
GeneRIF:15702130
GeneRIF:15713215
Lupus pernio of Besnier[accessedResource: SNOMEDCT:31541009][accessDate: 10-05-2010]
SCHAUMANN DIS[accessedResource: MSH:D012507][accessDate: 10-05-2010]
GeneRIF:16053025
Boecks Sarcoid[accessedResource: MSH:D012507][accessDate: 10-05-2010]
sarcoidosis
MSH:D012507
GeneRIF:12068984
lymphogranulomatosis[accessedResource: DOID:11335][accessDate: 10-05-2010]
GeneRIF:12413001
GeneRIF:15942292
NCIt:C34995
SNOMEDCT:31541009
Schaumann's Syndrome[accessedResource: MSH:D012507][accessDate: 10-05-2010]
Besnier Boeck Schaumann Syndrome
Boeck's Disease[accessedResource: MSH:D012507][accessDate: 10-05-2010]
Lupus pernio of Besnier
An idiopathic systemic inflammatory granulomatous disorder comprised of epithelioid and multinucleated giant cells with little necrosis. It usually invades the lungs with fibrosis and may also involve lymph nodes, skin, liver, spleen, eyes, phalangeal bones, and parotid glands.[accessedResource: MSH:D012507][accessDate: 10-05-2010]
Schaumann's Syndromes[accessedResource: MSH:D012507][accessDate: 10-05-2010]
BESNIER BOECK DIS
lymphogranulomatosis
Boeck's Disease
An idiopathic inflammatory disorder characterized by the formation of non-necrotizing epithelioid granulomas which contain giant cells. It usually affects the lungs, lymph nodes, liver, and skin.[accessedResource: NCIt:C34995][accessDate: 10-05-2010]
GeneRIF:15976369
GeneRIF:14508706
GeneRIF:15735647
ICD9:135
Sarcoidosis, NOS[accessedResource: SNOMEDCT:31541009][accessDate: 10-05-2010]
Besnier Boeck Schaumann Syndrome[accessedResource: MSH:D012507][accessDate: 10-05-2010]
GeneRIF:12039524
CL:0000477
follicle cell
James Malone
An organochlorine acaricide that has formula C9H11Cl3NO3PS.
o,o-Diethyl-o-(3,5,6-trichloro-2-pyridyl)phosphorothioate
C9H11Cl3NO3PS
CCOP(=S)(OCC)Oc1nc(Cl)c(Cl)cc1Cl
Chlorpyrifos-ethyl
James Malone
chlorpyrifos
O,O-diethyl O-(3,5,6-trichloropyridin-2-yl) phosphorothioate
Trichlorpyrphos
O,O-diethyl O-(3,5,6-trichloropyridin-2-yl) thiophosphate
Phosphorothioic acid, O,O-diethyl O-(3,5,6-trichloro-2-pyridinyl) ester
Chlorpyriphos
m-Chlorpyrifos
InChI=1/C9H11Cl3NO3PS/c1-3-14-17(18,15-4-2)16-9-7(11)5-6(10)8(12)13-9/h5H,3-4H2,1-2H3
CHEBI:34631
InChIKey=SBPBAQFWLVIOKP-UHFFFAOYAG
http://www.ebi.ac.uk/efo/EFO_0001504
BTO:0001376
1: The proximal segment of the vertebrate hind limb extending from the hip to the knee and supported by a single large bone. n2: The segment of the leg immediately distal to the thigh in a bird or in a quadruped in which the true thigh is obscured.
1: The proximal segment of the vertebrate hind limb extending from the hip to the knee and supported by a single large bone. n2: The segment of the leg immediately distal to the thigh in a bird or in a quadruped in which the true thigh is obscured.[accessedResource: BTO:0001376][accessDate: 10-05-2010]
thigh
James Malone
hypoglycemic agent
antidiabetic
http://www.ebi.ac.uk/efo/EFO_0001844
CHEBI:35526
A drug which lowers the blood glucose level.
hypoglycemic drug
James Malone
Ele Holloway
KPL1
James Malone
CL:0000077
mesothelial cell
James Malone
B cell derived cell line
SW900
James Malone
Ele Holloway
GM11992
James Malone
ArrayExpress Team
RNA-seq
An assay in which sequencing technology (e.g. Solexa/454) is used to generate RNA sequence, analyse the transcibed regions of the genome, and or to quantitate transcript abundance
transcription profiling by high throughput sequencing
James Malone
FMA:69072
mesoderm
James Malone
An assay with input protein
protein assay
James Malone
CHEBI:15929
methyl {(1R,2R)-3-oxo-2-[(2Z)-pent-2-en-1-yl]cyclopentyl}acetate
3-oxo-2-(2-pentenyl)cyclopentaneacetic acid methyl ester
Ele Holloway
methyl (-)-jasmonate
CC\\C=C/C[C@@H]1[C@H](CCC1=O)CC(=O)OC
InChIKey=GEWDNTWNSAZUDX-WQMVXFAEBM
C13H20O3
James Malone
http://www.ebi.ac.uk/efo/EFO_0002413
InChI=1/C13H20O3/c1-3-4-5-6-11-10(7-8-12(11)14)9-13(15)16-2/h4-5,10-11H,3,6-9H2,1-2H3/b5-4-/t10-,11-/m1/s1
A jasmonate ester that has formula C13H20O3.
James Malone
HMEC S1
microliter
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001717
A volume unit which is equal to one millionth of a liter or 10^[-6] L.
true
Tomasz Adamusiak
A microliter is a volume unit which is equal to one millionth of a liter or 10^-6 L.
MO_926
James Malone
ul
µl
CL:0000765
normoblast
A nucleated precursor of an erythrocyte.[accessedResource: CL:0000765][accessDate: 10-05-2010]
erythroblast
normoblast[accessedResource: CL:0000765][accessDate: 10-05-2010]
A nucleated precursor of an erythrocyte.
James Malone
CORL 23
CORL-23
CORL23
James Malone
Ele Holloway
N(6),2'-O-dibutyryl cAMP
N(6),O(2')-dibutyryl adenosine 3',5'-cyclic monophosphate
InChI=1/C18H24N5O8P/c1-3-5-11(24)22-16-13-17(20-8-19-16)23(9-21-13)18-15(30-12(25)6-4-2)14-10(29-18)7-28-32(26,27)31-14/h8-10,14-15,18H,3-7H2,1-2H3,(H,26,27)(H,19,20,22,24)/t10-,14-,15-,18-/m1/s1/f/h22,26H
bucladesine
N(6),O(2')-dibutyryladenosine 3',5'-monophosphate
dibutyryladenosine cyclic monophosphate
CCCC(=O)Nc1ncnc2n(cnc12)[C@@H]1O[C@@H]2COP(O)(=O)O[C@H]2[C@H]1OC(=O)CCC
dibutyryl cyclic 3',5'-adenylic acid
bucladesinum
dibutyryl cyclic AMP
dibutyryl-3',5'-AMP
dibutyryl adenosine 3',5'-monophosphate
CHEBI:50095
dibutyryl cAMP
dibutyryl cyclic adenosine 3',5'-monophosphate
http://www.ebi.ac.uk/efo/EFO_0001495
C18H24N5O8P
3',5'-cyclic AMP dibutyrate
N(6),O(2')-dibutyryl cyclic AMP
bucladesina
dibutyryladenosine 3',5'-cyclic monophosphate
InChIKey=CJGYSWNGNKCJSB-NOICQAOIDM
dibutyryl adenosine 3',5'-cyclic phosphate
6-N-butanoyl-2'-O-butanoyladenosine 3',5'-(hydrogen phosphate)
dibutyryl 3',5'-cyclic AMP
N(6),O(2')-dibutyryl cyclic 3',5'-AMP
Hemorrhages, Aneurysmal Subarachnoid
GeneRIF:15381648
Perinatal Subarachnoid Hemorrhages
Spontaneous Subarachnoid Hemorrhage[accessedResource: MSH:D013345][accessDate: 10-05-2010]
Hemorrhages, Spontaneous Subarachnoid[accessedResource: MSH:D013345][accessDate: 10-05-2010]
Bleeding into the intracranial or spinal SUBARACHNOID SPACE, most resulting from INTRACRANIAL ANEURYSM rupture. It can occur after traumatic injuries (SUBARACHNOID HEMORRHAGE, TRAUMATIC). Clinical features include HEADACHE; NAUSEA; VOMITING, nuchal rigidity, variable neurological deficits and reduced mental status.[accessedResource: MSH:D013345][accessDate: 10-05-2010]
DOID:11236
SAHs (Subarachnoid Hemorrhage)[accessedResource: MSH:D013345][accessDate: 10-05-2010]
Subarachnoid hemorrhage NOS
GeneRIF:15091109
Subarachnoid hemorrhage (disorder)
SAH - Subarachnoid haemorrhage
SAH (Subarachnoid Hemorrhage)
Subarachnoid Hemorrhages, Spontaneous
Subarachnoid haemorrhage
ICD9:430
Subarachnoid haemorrhage NOS
James Malone
MSH:D013345
Subarachnoid Hemorrhage, Intracranial
SAH - Subarachnoid haemorrhage[accessedResource: SNOMEDCT:21454007][accessDate: 10-05-2010]
Subarachnoid hemorrhage NOS (disorder)[accessedResource: SNOMEDCT:195162008][accessDate: 10-05-2010]
SNOMEDCT:195162008
GeneRIF:15665056
Subarachnoid Hemorrhage, Intracranial[accessedResource: MSH:D013345][accessDate: 10-05-2010]
GeneRIF:14753493
GeneRIF:15947258
Subarachnoid Hemorrhages, Aneurysmal[accessedResource: MSH:D013345][accessDate: 10-05-2010]
Hemorrhages, Subarachnoid
SAHs (Subarachnoid Hemorrhage)
SNOMEDCT:21454007
GeneRIF:15297630
Intracranial Subarachnoid Hemorrhages
Hemorrhages, Subarachnoid[accessedResource: MSH:D013345][accessDate: 10-05-2010]
GeneRIF:15331787
GeneRIF:15947264
Perinatal Subarachnoid Hemorrhage[accessedResource: MSH:D013345][accessDate: 10-05-2010]
Perinatal Subarachnoid Hemorrhages[accessedResource: MSH:D013345][accessDate: 10-05-2010]
Subarachnoid Hemorrhages, Intracranial[accessedResource: MSH:D013345][accessDate: 10-05-2010]
Subarachnoid hemorrhage NOS[accessedResource: SNOMEDCT:195162008][accessDate: 10-05-2010]
GeneRIF:12677022
Subarachnoid Hemorrhage, Aneurysmal[accessedResource: MSH:D013345][accessDate: 10-05-2010]
Subarachnoid haemorrhage NOS[accessedResource: SNOMEDCT:195162008][accessDate: 10-05-2010]
Subarachnoid haemorrhage[accessedResource: SNOMEDCT:21454007][accessDate: 10-05-2010]
Subarachnoid hemorrhage NOS (disorder)
Subarachnoid hemorrhage (disorder)[accessedResource: DOID:11236][accessDate: 10-05-2010]
Hemorrhage, Aneurysmal Subarachnoid
Subarachnoid Hemorrhage, Perinatal
subarachnoid hemorrhage
Hemorrhage, Spontaneous Subarachnoid
SAH - Subarachnoid hemorrhage[accessedResource: SNOMEDCT:21454007][accessDate: 10-05-2010]
Bleeding into the intracranial or spinal SUBARACHNOID SPACE, most resulting from INTRACRANIAL ANEURYSM rupture. It can occur after traumatic injuries (SUBARACHNOID HEMORRHAGE, TRAUMATIC). Clinical features include HEADACHE; NAUSEA; VOMITING, nuchal rigidity, variable neurological deficits and reduced mental status.
MSH:D011470
GeneRIF:12111704
GeneRIF:12595443
GeneRIF:15129425
James Malone
NCIt:C2897
GeneRIF:14678983
GeneRIF:12530058
Benign enlargement of prostate, NOS
Hyperplasia, Prostatic[accessedResource: MSH:D011470][accessDate: 10-05-2010]
GeneRIF:15314639
Benign enlargement of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 10-05-2010]
SNOMEDCT:367483003
Adenomyomatous hyperplasia of prostate gland
GeneRIF:15599946
Benign myoma of prostate
ICD9:600.0
Benign prostatic hypertrophy
Lobular hyperplasia of prostate gland
GeneRIF:15515049
Hyperplasia of prostate
Prostatic hypertrophy[accessedResource: SNOMEDCT:266569009][accessDate: 10-05-2010]
Hypertrophy (benign) of prostate
Prostatic hyper -benign
Increase in constituent cells in the PROSTATE, leading to enlargement of the organ (hypertrophy) and adverse impact on the lower urinary tract function. This can be caused by increased rate of cell proliferation, reduced rate of cell death, or both.[accessedResource: MSH:D011470][accessDate: 10-05-2010]
BEP - Benign enlargement of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 10-05-2010]
benign prostatic hyperplasia (disorder)[accessedResource: DOID:11131][accessDate: 10-05-2010]
Glandular, stromal and muscular hyperplasia of prostate gland[accessedResource: SNOMEDCT:367483003][accessDate: 10-05-2010]
benign prostatic hypertrophy[accessedResource: DOID:11131][accessDate: 10-05-2010]
Hyperplasia of prostate, NOS
Glandular, stromal AND/OR muscular hyperplasia of prostate gland
Prostatic hypertrophy
Prostatic area hypertrophy
Benign adenoma of prostate
Benign Hyperplasia of the Prostate[accessedResource: NCIt:C2897][accessDate: 10-05-2010]
Benign Hyperplasia of Prostate[accessedResource: NCIt:C2897][accessDate: 10-05-2010]
Benign enlargement of prostate, NOS[accessedResource: SNOMEDCT:367483003][accessDate: 10-05-2010]
GeneRIF:15999119
Benign fibroma of prostate
GeneRIF:15178433
BEP - Benign enlargement of prostate
benign hypertrophy of prostate NOS
Glandular, stromal and muscular hyperplasia of prostate gland
hypertrophy (benign) of prostate[accessedResource: DOID:11131][accessDate: 10-05-2010]
Benign prostatic hyperplasia (disorder)
Prostatic Adenomas
Nodular hyperplasia of prostate gland[accessedResource: SNOMEDCT:266569009][accessDate: 10-05-2010]
Benign Prostate Hyperplasia
GeneRIF:16114059
GeneRIF:12552318
Benign prostatic hyperplasia, NOS
BPH
GeneRIF:15492805
GeneRIF:12111701
SNOMEDCT:266569009
Fibromuscular hyperplasia of prostate gland
Enlarged prostate - benign[accessedResource: DOID:11131][accessDate: 10-05-2010]
Hyperplasia of prostate[accessedResource: SNOMEDCT:367483003][accessDate: 10-05-2010]
Prostatic Adenoma
Hyperplasia of prostate (disorder)[accessedResource: SNOMEDCT:367483003][accessDate: 10-05-2010]
GeneRIF:15611997
GeneRIF:12142541
Hyperplasia of prostate, NOS[accessedResource: SNOMEDCT:367483003][accessDate: 10-05-2010]
Adenoma, Prostatic[accessedResource: MSH:D011470][accessDate: 10-05-2010]
GeneRIF:14604900
Enlarged prostate - benign
Benign prostatic hyperplasia, NOS[accessedResource: SNOMEDCT:367483003][accessDate: 10-05-2010]
Prostatauxe[accessedResource: SNOMEDCT:367483003][accessDate: 10-05-2010]
A disease caused by hyperplastic process of non-transformed prostatic cells.
BPH - Benign prostatic hypertrophy[accessedResource: SNOMEDCT:266569009][accessDate: 10-05-2010]
Benign Prostate Hyperplasia[accessedResource: NCIt:C2897][accessDate: 10-05-2010]
Prostatic Hyperplasia
GeneRIF:12399530
Benign enlargement of prostate
A non-cancerous nodular enlargement of the prostate gland. It is characterized by the presence of epithelial cell nodules, and stromal nodules containing fibrous and smooth muscle elements. It is the most common urologic disorder in men, causing blockage of urine flow.
Benign fibroma of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 10-05-2010]
GeneRIF:12771801
Prostatic area hypertrophy[accessedResource: SNOMEDCT:266569009][accessDate: 10-05-2010]
GeneRIF:11550212
Glandular, stromal AND/OR muscular hyperplasia of prostate gland[accessedResource: SNOMEDCT:367483003][accessDate: 10-05-2010]
Adenofibromatous hypertrophy of prostate, NOS
Adenofibromatous hypertrophy of prostate, NOS[accessedResource: SNOMEDCT:367483003][accessDate: 10-05-2010]
benign hypertrophy of prostate NOS[accessedResource: DOID:11131][accessDate: 10-05-2010]
benign prostatic hyperplasia
Benign adenoma of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 10-05-2010]
GeneRIF:15621731
GeneRIF:12673556
GeneRIF:15678497
A non-cancerous nodular enlargement of the prostate gland. It is characterized by the presence of epithelial cell nodules, and stromal nodules containing fibrous and smooth muscle elements. It is the most common urologic disorder in men, causing blockage of urine flow.[accessedResource: NCIt:C2897][accessDate: 10-05-2010]
Benign Hyperplasia of the Prostate
Prostatic Adenomas[accessedResource: MSH:D011470][accessDate: 10-05-2010]
Increase in constituent cells in the PROSTATE, leading to enlargement of the organ (hypertrophy) and adverse impact on the lower urinary tract function. This can be caused by increased rate of cell proliferation, reduced rate of cell death, or both.
Benign myoma of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 10-05-2010]
Benign Hyperplasia of Prostate
BPH - Benign prostatic hypertrophy
Prostatauxe
Lobular hyperplasia of prostate gland[accessedResource: SNOMEDCT:367483003][accessDate: 10-05-2010]
GeneRIF:15083213
Hyperplasia of prostate (disorder)
DOID:11131
Prostatic hyper -benign[accessedResource: DOID:11131][accessDate: 10-05-2010]
Adenofibromatous hypertrophy of prostate
GeneRIF:15136785
Nodular hyperplasia of prostate gland
Adenofibromatous hypertrophy of prostate[accessedResource: SNOMEDCT:367483003][accessDate: 10-05-2010]
GeneRIF:16018939
A disease caused by hyperplastic process of non-transformed prostatic cells.[accessedResource: MSH:D011470][accessDate: 10-05-2010]
Fibromuscular hyperplasia of prostate gland[accessedResource: SNOMEDCT:367483003][accessDate: 10-05-2010]
BPH[accessedResource: NCIt:C2897][accessDate: 10-05-2010]
Adenomyomatous hyperplasia of prostate gland[accessedResource: SNOMEDCT:367483003][accessDate: 10-05-2010]
C7H7NO3
Asacol
Mesasal
5-amino-2-hydroxybenzoic acid
5-Aminosalicylic acid
Rowasa
5-ASA
Claversal
Pentasa
Canasa
mesalamine
An aromatic amine that has formula C7H7NO3.
CHEBI:6775
Asacolitin
InChI=1/C7H7NO3/c8-4-1-2-6(9)5(3-4)7(10)11/h1-3,9H,8H2,(H,10,11)/f/h10H
Mesalazinum
mesalazine
InChIKey=KBOPZPXVLCULAV-KZFATGLACE
p-Aminosalicylsaeure
Nc1ccc(O)c(c1)C(O)=O
3-carboxy-4-hydroxyaniline
Salofalk
m-Aminosalicylic acid
Mesalazina
Fisalamine
Lixacol
Iialda
http://www.ebi.ac.uk/efo/EFO_0001569
trichostatin A
TSA
CHEBI:46024
A trichostatin that has formula C17H22N2O3.
InChIKey=RTKIYFITIVXBLE-LPBLKGKXDH
(2E,4E,6R)-7-(4-(dimethylamino)phenyl)-N-hydroxy-4,6-dimethyl-7-oxo-2,4-heptadienamide
C17H22N2O3
James Malone
(2E,4E,6R)-7-[4-(dimethylamino)phenyl]-N-hydroxy-4,6-dimethyl-7-oxohepta-2,4-dienamide
C[C@@H](C(=O)c1ccc(cc1)N(C)C)\\C=C(C)\\C=C\\C(=O)NO
http://www.ebi.ac.uk/efo/EFO_0001630
InChI=1/C17H22N2O3/c1-12(5-10-16(20)18-22)11-13(2)17(21)14-6-8-15(9-7-14)19(3)4/h5-11,13,22H,1-4H3,(H,18,20)/b10-5+,12-11+/t13-/m1/s1/f/h18H
An inorganic peroxide that has formula H2O2.
[OH(OH)]
dihydrogen peroxide
Oxydol
dihydrogen dioxide
[H]OO[H]
H2O2
dioxidane
H(2)O(2)
bis(hydridooxygen)(O--O)
InChI=1/H2O2/c1-2/h1-2H
InChIKey=MHAJPDPJQMAIIY-UHFFFAOYAL
CHEBI:16240
http://www.ebi.ac.uk/efo/EFO_0001553
hydrogen peroxide
HOOH
MO_928
The process of obtaining quantifiable values from the scanned image of the array. Exact synonyms: image analysis, image quantification
feature extraction
Tomasz Adamusiak
Jie Zheng
James Malone
Also known as chromophil carcinoma, it represents a minority of renal cell carcinomas. It can be hereditary or sporadic. The sporadic papillary renal cell carcinoma is characterized by trisomy of chromosomes 7, 16, and 17, and loss of chromosome Y. The peak incidence is in the sixth and seven decades. It is classified as type 1 or 2, based on the cytoplasmic volume and the thickness of the lining neoplastic cells. The prognosis is more favorable than for conventional (clear cell) renal cell carcinoma. -- 2003[accessedResource: NCIt:C6975][accessDate: 10-05-2010]
Tumor, Grawitz
Sarcomatoid Renal Cell Carcinoma
MSH:D002292
Chromophil Carcinoma of the Kidney[accessedResource: NCIt:C6975][accessDate: 10-05-2010]
Nephroid Carcinomas
Clear Cell Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophil Renal Cell Carcinoma[accessedResource: NCIt:C6975][accessDate: 10-05-2010]
Chromophobe Renal Cell Carcinoma
Clear Cell Renal Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Cell Carcinomas
Carcinoma, Nephroid
Papillary (Chromophil) Renal Cell Carcinoma
Adenocarcinoma, Renal Cell
DOID:4465
Sarcomatoid Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephromas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophobe Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Nephroid Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephroid Carcinomas
Papillary (Chromophil) Renal Cell Carcinoma[accessedResource: NCIt:C6975][accessDate: 10-05-2010]
Hypernephroid Carcinoma
Papillary renal cell carcinoma is a renal cell carcinoma characterized as the second most common type of renal cell carcinoma. The cancerous cells form some projections in a finger shape, called papillae, in the tumor. This type of cancer is more common among African Americans and has a good prognosis if treated with surgery in its early stages.
Clear Cell Renal Cell Carcinoma
GeneRIF:15073597
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.[accessedResource: MSH:D002292][accessDate: 10-05-2010]
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.
Renal Cell Adenocarcinomas
Clear Cell Renal Carcinoma
GeneRIF:15502805
Carcinomas, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinoma, Collecting Duct (Kidney)
Chromophil Carcinoma of kidney
Tumor, Grawitz[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:15579033
Carcinoma, Collecting Duct (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephroma
Hypernephromas
Duct Carcinomas, Collecting (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophil Renal Cell Carcinoma
Adenocarcinomas, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophil Carcinoma of the Kidney
Also known as chromophil carcinoma, it represents a minority of renal cell carcinomas. It can be hereditary or sporadic. The sporadic papillary renal cell carcinoma is characterized by trisomy of chromosomes 7, 16, and 17, and loss of chromosome Y. The peak incidence is in the sixth and seven decades. It is classified as type 1 or 2, based on the cytoplasmic volume and the thickness of the lining neoplastic cells. The prognosis is more favorable than for conventional (clear cell) renal cell carcinoma. -- 2003
Carcinomas, Collecting Duct (Kidney)
NCIt:C6975
Hypernephroid Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophil Carcinoma of Kidney[accessedResource: NCIt:C6975][accessDate: 10-05-2010]
Carcinoma, Renal Cell
Carcinomas, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Papillary renal cell carcinoma is a renal cell carcinoma characterized as the second most common type of renal cell carcinoma. The cancerous cells form some projections in a finger shape, called papillae, in the tumor. This type of cancer is more common among African Americans and has a good prognosis if treated with surgery in its early stages.[accessedResource: DOID:4465][accessDate: 10-05-2010]
James Malone
Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
papillary renal cell carcinoma
Hypernephroid Carcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephroma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Cell Adenocarcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
http://sig.biostr.washington.edu/fma3.0#Retroperitoneal_space
retroperitoneum space
The retroperitoneum (or extraperitoneum) is the anatomical space in the abdominal cavity behind (retro) the peritoneum. [wikipedia: http://en.wikipedia.org/wiki/Retroperitoneum]
retroperitoneum
James Malone
InChI=1/C16H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16(17)18/h2-15H2,1H3,(H,17,18)/f/h17H
palmitic acid
CCCCCCCCCCCCCCCC(O)=O
A straight-chain saturated fatty acid that has formula C16H32O2.
InChIKey=IPCSVZSSVZVIGE-HCKMINDGCQ
Hexadecanoic acid
http://www.ebi.ac.uk/efo/EFO_0001552
CHEBI:15756
GeneRIF:12711118
large cell neuroendocrine carcinoma
SNOMEDCT:128628002
Large cell neuroendocrine carcinoma (morphologic abnormality)
A usually aggressive carcinoma composed of large malignant cells which display neuroendocrine characteristics. It is characterized by the presence of high mitotic activity and necrotic changes. The vast majority of cases are positive for neuron-specific enolase. Representative examples include lung, breast, cervical, and thymic neuroendocrine carcinomas.[accessedResource: NCIt:C6875][accessDate: 10-05-2010]
NCIt:C6875
DOID:5721
James Malone
A usually aggressive carcinoma composed of large malignant cells which display neuroendocrine characteristics. It is characterized by the presence of high mitotic activity and necrotic changes. The vast majority of cases are positive for neuron-specific enolase. Representative examples include lung, breast, cervical, and thymic neuroendocrine carcinomas.
large cell neuroendocrine carcinoma (morphologic abnormality)[accessedResource: DOID:5721][accessDate: 10-05-2010]
GeneRIF:12605092
N-[(E)-AMINO(IMINO)METHYL]-N-METHYLGLYCINE
N-methyl-N-guanylglycine
CN(CC(O)=O)C(N)=N
creatine
N-amidinosarcosine
Methylglycocyamine
InChI=1/C4H9N3O2/c1-7(4(5)6)2-3(8)9/h2H2,1H3,(H3,5,6)(H,8,9)/f/h5,8H,6H2
alpha-Methylguanidino acetic acid
A glycine derivative that has formula C4H9N3O2.
(N-methylcarbamimidamido)acetic acid
Creatin
(alpha-methylguanido)acetic acid
N-(aminoiminomethyl)-N-methylglycine
Kreatin
InChIKey=CVSVTCORWBXHQV-FVNFBLHMCI
C4H9N3O2
http://www.ebi.ac.uk/efo/EFO_0001514
CHEBI:16919
NCIt:C14172
For neoplasms, a non-infiltrating and non-metastasizing neoplastic process that is characterized by the absence of morphologic features associated with malignancy (e.g., severe atypia, nuclear pleomorphism, tumor cell necrosis, and abnormal mitoses). For other conditions, a process that is mild in nature and not dangerous to health.
For neoplasms, a non-infiltrating and non-metastasizing neoplastic process that is characterized by the absence of morphologic features associated with malignancy (e.g., severe atypia, nuclear pleomorphism, tumor cell necrosis, and abnormal mitoses). For other conditions, a process that is mild in nature and not dangerous to health.[accessedResource: NCIt:C14172][accessDate: 10-05-2010]
benign
Tomasz Adamusiak
Jie Zheng
http://www.arabidopsis.org/servlets/TairObject?id=1005164919&type=germplasm
CS57923 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005164919&type=germplasm
CS57923
James Malone
R18
James Malone
http://jaxmice.jax.org/strain/009310.html
ILSXISS56/TejJ
Tomasz Adamusiak
birnlex_7083
Theiler stage 28
Tomasz Adamusiak
Jie Zheng
true
Tomasz Adamusiak
A meter is a length unit which is equal to the length of the path traveled by light in vacuum during a time interval of 1/299 792 458 of a second.
Jie Zheng
James Malone
MO_367
meter
m
A length unit which is equal to the length of the path traveled by light in vacuum during a time interval of 1/299 792 458 of a second.
metre
http://www.ebi.ac.uk/efo/EFO_0001685
PO:0000256
A filamentous extension of an epidermal cell near the tip of a rootlet that functions in absorption of water and minerals.nSpecialized unicellular trichome found in roots.
James Malone
root hair
BTO:0001804
MAT:0000352
A filamentous extension of an epidermal cell near the tip of a rootlet that functions in absorption of water and minerals.nSpecialized unicellular trichome found in roots.[accessedResource: BTO:0001804][accessDate: 10-05-2010]
birn_anat:nlx_anat_20090307
FMAID:77387
nucleus accumbens shell
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158679&type=germplasm
CS57655 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158679&type=germplasm
CS57655
James Malone
lisinopril
James Malone
N(2)-[(1S)-1-carboxy-3-phenylpropyl]-L-lysyl-L-proline
http://www.ebi.ac.uk/efo/EFO_0001566
A dipeptide that has formula C21H31N3O5.
[N2-[(S)-1-CARBOXY-3-PHENYLPROPYL]-L-LYSYL-L-PROLINE
CHEBI:43755
(S)-1-(N(2)-(1-carboxy-3-phenylpropyl)-L-lysyl)-L-proline
NCCCC[C@H](N[C@@H](CCc1ccccc1)C(O)=O)C(=O)N1CCC[C@H]1C(O)=O
C21H31N3O5
InChI=1/C21H31N3O5/c22-13-5-4-9-16(19(25)24-14-6-10-18(24)21(28)29)23-17(20(26)27)12-11-15-7-2-1-3-8-15/h1-3,7-8,16-18,23H,4-6,9-14,22H2,(H,26,27)(H,28,29)/t16-,17-,18-/m0/s1/f/h26,28H
InChIKey=RLAWWYSOJDYHDC-YMXGEOMKDH
lisinopril anhydrous
ArrayExpress production team
An assay in which variation in the genome is analysed
genotyping
James Malone
FBbt:00001690
crystal cell
James Malone
MS428
James Malone
Ele Holloway
DMS153
James Malone
Ele Holloway
1.8
true
obsolete_WI38
James Malone
Ele Holloway
Duplicate use EFO_0001260
Planocellular Carcinoma
Malignant Epidermoid Cell Tumor
Carcinomas, Epidermoid[accessedResource: MSH:D002294][accessDate: 10-05-2010]
GeneRIF:12452003
GeneRIF:15001836
GeneRIF:12168821
GeneRIF:15363037
GeneRIF:15920558
squamous cell carcinoma (disorder)[accessedResource: DOID:1749][accessDate: 10-05-2010]
GeneRIF:14555508
GeneRIF:12860293
GeneRIF:14985402
GeneRIF:15180941
GeneRIF:15830715
GeneRIF:15811118
GeneRIF:12190814
GeneRIF:13679863
GeneRIF:12413951
GeneRIF:14961580
GeneRIF:12722480
GeneRIF:11875739
GeneRIF:14760079
GeneRIF:15252855
GeneRIF:12926130
GeneRIF:14707456
GeneRIF:14734465
[M]Squamous cell carcinoma NOS (morphologic abnormality)
Carcinomas, Epidermoid
Squamous Cell Epithelioma
GeneRIF:15754018
GeneRIF:16201750
GeneRIF:14676802
GeneRIF:15568401
GeneRIF:15740587
GeneRIF:15579456
[M]Squamous cell carcinoma NOS[accessedResource: SNOMEDCT:189566008][accessDate: 10-05-2010]
GeneRIF:14871981
Carcinomas, Planocellular
Squamous Carcinoma
GeneRIF:15756447
GeneRIF:14708636
GeneRIF:15870689
Epidermoid carcinoma, NOS[accessedResource: SNOMEDCT:28899001][accessDate: 10-05-2010]
Squamous Carcinoma[accessedResource: NCIt:C2929][accessDate: 10-05-2010]
GeneRIF:12174888
GeneRIF:12115476
Malignant Epidermoid Cell Neoplasm
GeneRIF:15094779
GeneRIF:15585623
NCIt:C8999
GeneRIF:15197677
GeneRIF:15625067
GeneRIF:15878916
Epidermoid Cell Cancer
Squamous cell carcinoma (morphologic abnormality)
GeneRIF:12958179
GeneRIF:15184245
Squamous cell carcinoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:28899001][accessDate: 10-05-2010]
Malignant Epidermoid Cell Tumor[accessedResource: NCIt:C2929][accessDate: 10-05-2010]
GeneRIF:15365571
GeneRIF:12194986
GeneRIF:15205458
GeneRIF:12632084
GeneRIF:12823440
GeneRIF:12174890
GeneRIF:15254682
GeneRIF:12668285
GeneRIF:12879021
GeneRIF:12429789
GeneRIF:15170282
GeneRIF:12112307
GeneRIF:14981906
GeneRIF:14719077
GeneRIF:15059221
GeneRIF:15609307
SNOMEDCT:402815007
GeneRIF:12169394
GeneRIF:15551738
GeneRIF:11779227
GeneRIF:11788901
GeneRIF:12447480
GeneRIF:15184269
GeneRIF:12115490
GeneRIF:15767556
GeneRIF:11959846
A carcinoma derived from stratified squamous epithelium. It may also occur in sites where glandular or columnar epithelium is normally present. (From Stedman, 25th ed)[accessedResource: MSH:D002294][accessDate: 10-05-2010]
Squamous cell carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:28899001][accessDate: 10-05-2010]
Epidermoid Carcinoma
GeneRIF:15200479
GeneRIF:12579289
SCC - Squamous cell carcinoma
GeneRIF:16024014
James Malone
GeneRIF:12787042
GeneRIF:15375751
GeneRIF:15832405
GeneRIF:14981901
GeneRIF:12579497
Malignant Squamous Cell Neoplasm
GeneRIF:12474056
Squamous Cell Cancer[accessedResource: NCIt:C2929][accessDate: 10-05-2010]
GeneRIF:12408753
Squamous cell carcinoma, NOS[accessedResource: SNOMEDCT:28899001][accessDate: 10-05-2010]
GeneRIF:14607337
GeneRIF:16327980
GeneRIF:12748469
GeneRIF:16091114
GeneRIF:12700631
SNOMEDCT:28899001
GeneRIF:12824922
GeneRIF:15073598
GeneRIF:15567470
GeneRIF:12878090
GeneRIF:16142392
GeneRIF:12929940
Epidermoid Carcinoma[accessedResource: MSH:D002294][accessDate: 10-05-2010]
GeneRIF:15817070
GeneRIF:12029498
GeneRIF:11956617
GeneRIF:15492752
GeneRIF:12841867
GeneRIF:12372346
GeneRIF:12676577
squamous cell carcinoma (disorder)
Carcinomas, Squamous Cell
GeneRIF:14767526
Squamous cell carcinoma, no ICD-O subtype
GeneRIF:15033492
squamous cell carcinoma NOS (morphologic abnormality)
GeneRIF:15331608
GeneRIF:15930346
GeneRIF:15173661
GeneRIF:14633701
GeneRIF:16035618
A carcinoma derived from stratified squamous epithelium. It may also occur in sites where glandular or columnar epithelium is normally present. (From Stedman, 25th ed)
MSH:D002294
GeneRIF:12269988
GeneRIF:12607604
GeneRIF:15161058
GeneRIF:12969350
Epidermoid Cell Cancer[accessedResource: NCIt:C2929][accessDate: 10-05-2010]
GeneRIF:14517347
GeneRIF:15329319
Malignant Epidermoid Cell Neoplasm[accessedResource: NCIt:C2929][accessDate: 10-05-2010]
Carcinomas, Squamous
Squamous cell carcinoma, no ICD-O subtype (morphologic abnormality)
GeneRIF:15856454
Carcinomas, Planocellular[accessedResource: MSH:D002294][accessDate: 10-05-2010]
GeneRIF:14750174
Malignant Squamous Cell Neoplasm[accessedResource: NCIt:C2929][accessDate: 10-05-2010]
GeneRIF:11836590
GeneRIF:14604894
GeneRIF:12060398
GeneRIF:12738984
Squamous cell carcinoma, NOS
GeneRIF:11814623
GeneRIF:12694349
GeneRIF:15254763
GeneRIF:12720100
GeneRIF:12527941
GeneRIF:15061963
GeneRIF:14702179
GeneRIF:15638360
Carcinoma, Planocellular[accessedResource: MSH:D002294][accessDate: 10-05-2010]
GeneRIF:11957139
Malignant Squamous Cell Tumor
squamous cell carcinoma
GeneRIF:15254691
GeneRIF:15515019
GeneRIF:15201990
GeneRIF:15218300
GeneRIF:15328184
GeneRIF:15328914
GeneRIF:16211299
GeneRIF:15241500
GeneRIF:14997212
GeneRIF:16172916
Squamous Cell Cancer
Malignant Squamous Cell Tumor[accessedResource: NCIt:C2929][accessDate: 10-05-2010]
GeneRIF:14676801
GeneRIF:15709189
GeneRIF:11920472
GeneRIF:12452059
SNOMEDCT:189566008
GeneRIF:14993646
Epidermoid carcinoma, NOS
GeneRIF:12565178
GeneRIF:15201986
GeneRIF:15526353
GeneRIF:12599217
GeneRIF:12954496
[M]Squamous cell carcinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189566008][accessDate: 10-05-2010]
GeneRIF:14733907
GeneRIF:15776189
Squamous cell carcinoma, no ICD-O subtype[accessedResource: SNOMEDCT:28899001][accessDate: 10-05-2010]
GeneRIF:15254686
SCC - Squamous cell carcinoma[accessedResource: SNOMEDCT:28899001][accessDate: 10-05-2010]
GeneRIF:15390192
GeneRIF:16127291
GeneRIF:15826242
GeneRIF:15140235
GeneRIF:12851677
GeneRIF:14529662
GeneRIF:15217930
GeneRIF:15754020
GeneRIF:15774758
GeneRIF:14604896
GeneRIF:12670508
GeneRIF:12727836
NCIt:C2929
GeneRIF:11960918
GeneRIF:15388813
GeneRIF:15943786
squamous cell carcinoma NOS (morphologic abnormality)[accessedResource: DOID:1749][accessDate: 10-05-2010]
GeneRIF:16077964
GeneRIF:12479097
GeneRIF:11887018
Squamous cell epithelioma[accessedResource: SNOMEDCT:28899001][accessDate: 10-05-2010]
GeneRIF:14567988
GeneRIF:12743035
GeneRIF:12964017
GeneRIF:15662526
Carcinomas, Squamous Cell[accessedResource: MSH:D002294][accessDate: 10-05-2010]
Carcinomas, Squamous[accessedResource: MSH:D002294][accessDate: 10-05-2010]
A carcinoma arising from squamous epithelial cells. Morphologically, it is characterized by the proliferation of atypical, often pleomorphic squamous cells. Squamous cell carcinomas are graded by the degree of cellular differentiation as well, moderately, or poorly differentiated. Well differentiated carcinomas are usually associated with keratin production and the presence of intercellular bridges between adjacent cells. Representative examples are lung squamous cell carcinoma, skin squamous cell carcinoma, and cervical squamous cell carcinoma.
GeneRIF:15151617
GeneRIF:16012760
GeneRIF:16022908
GeneRIF:12841598
GeneRIF:12792768
[M]Squamous cell carcinoma NOS
GeneRIF:14991744
GeneRIF:12270344
GeneRIF:12681285
A carcinoma arising from squamous epithelial cells. Morphologically, it is characterized by the proliferation of atypical, often pleomorphic squamous cells. Squamous cell carcinomas are graded by the degree of cellular differentiation as well, moderately, or poorly differentiated. Well differentiated carcinomas are usually associated with keratin production and the presence of intercellular bridges between adjacent cells. Representative examples are lung squamous cell carcinoma, skin squamous cell carcinoma, and cervical squamous cell carcinoma.[accessedResource: NCIt:C2929][accessDate: 10-05-2010]
GeneRIF:11982752
DOID:1749
GeneRIF:15816843
multipotent adult progenitor cell
multi fate stem cell[accessedResource: CL:0000048][accessDate: 10-05-2010]
CL:0000048
multi fate stem cell
A stem cell that can give rise to mulitple lineages of cells.[accessedResource: CL:0000048][accessDate: 10-05-2010]
multipotent stem cell
James Malone
A stem cell that can give rise to mulitple lineages of cells.
NCIH2171
James Malone
Ele Holloway
The prefrontal cortex is the anterior part of the frontal lobes of the brain, lying in front of the motor and premotor areas.
prefrontal cortex
The prefrontal cortex is the anterior part of the frontal lobes of the brain, lying in front of the motor and premotor areas.[accessedResource: BTO:0002807][accessDate: 10-05-2010]
Prefrontal association cortex
BTO:0002807
FMAID:224850
Tomasz Adamusiak
Prefrontal association cortex[accessedResource: FMAID:224850][accessDate: 10-05-2010]
James Malone
antifungal drugs
antifungal agent
http://www.ebi.ac.uk/efo/EFO_0001855
CHEBI:35718
A substance that destroys fungi by suppressing their ability to grow or reproduce. Antifungal drugs differ from industrial fungicides in that they defend against fungi present in human or animal tissues.
antifungal drug
James Malone
FBst0000001Â
Canton S
James Malone
R1 is a mouse embryonic stem cell line.
James Malone
Ele Holloway
R1
MO_575
sex design
Tomasz Adamusiak
Caudal is a geometric modifier which indicates a position towards the tail.
caudal
James Malone
The soft tissue surrounding the neck of individual teeth as well as covering the alveolar bone. The tissue is fibrous and continuous with the periodontal ligament and mucosal covering.[accessedResource: NCIt:C32677][accessDate: 10-05-2010]
NCIt:C32677
James Malone
The tissue that surrounds the necks of teeth and covers the alveolar parts of the jaws; broadly: the alveolar portion of a jaw with its enveloping soft tissues.
The tissue that surrounds the necks of teeth and covers the alveolar parts of the jaws; broadly: the alveolar portion of a jaw with its enveloping soft tissues.[accessedResource: BTO:0000519][accessDate: 10-05-2010]
gingiva
gum
FMA:59762
The soft tissue surrounding the neck of individual teeth as well as covering the alveolar bone. The tissue is fibrous and continuous with the periodontal ligament and mucosal covering.
gingiva[accessedResource: BTO:0000519][accessDate: 10-05-2010]
BTO:0000519
MAT:0000034
Arterial vessel
arterial system[accessedResource: ZFA:0000005][accessDate: 10-05-2010]
Arterial vessel[accessedResource: FMAID:50720][accessDate: 10-05-2010]
TAO:0000005
ZFA:0000005
Vessels that carry blood away from the heart.
EMAPA:16201
Arterial tree organ part[accessedResource: FMAID:50720][accessDate: 10-05-2010]
Any of the tubular branching muscular- and elastic-walled vessels that carry blood from the heart through the body.
artery
XAO:0000114
Any of the tubular branching muscular- and elastic-walled vessels that carry blood from the heart through the body.[accessedResource: BTO:0000573][accessDate: 10-05-2010]
MA:0000061
Subdivision of arterial tree (organ) which consists of branching sets of tubes (arterial trunk) that form a tree; together with other arterial trees (organ part), it constitutes an arterial tree (organ). Examples: pulmonary arterial tree, right coronary arterial tree, superior mesenteric tree.
Arterial subtree
Arterial subtree[accessedResource: FMAID:50720][accessDate: 10-05-2010]
Vessels that carry blood away from the heart.[accessedResource: ZFA:0000005][accessDate: 10-05-2010]
FMAID:50720
BTO:0000573
arterial system
EV:0100026
Arterial tree organ part
EHDAA:396
James Malone
Subdivision of arterial tree (organ) which consists of branching sets of tubes (arterial trunk) that form a tree; together with other arterial trees (organ part), it constitutes an arterial tree (organ). Examples: pulmonary arterial tree, right coronary arterial tree, superior mesenteric tree.[accessedResource: FMAID:50720][accessDate: 10-05-2010]
MFO:0002900
[H][C@](C)(NC(=O)[C@@]([H])(NC(=O)c1nc(nc(N)c1C)[C@H](CC(N)=O)NC[C@H](N)C(N)=O)[C@@]([H])(O[C@@H]1O[C@@H](CO)[C@@H](O)[C@H](O)[C@@H]1O[C@H]1O[C@H](CO)[C@@H](O)[C@H](OC(N)=O)[C@@H]1O)c1c[nH]cn1)[C@@H](O)[C@H](C)C(=O)N[C@]([H])(C(=O)NCCc1nc(cs1)-c1nc(cs1)C(=O)NCCC[S+](C)C)[C@@]([H])(C)O
(betaR)-N(alpha)-{[6-amino-2-((1S)-3-amino-1-{[(2S)-2,3-diamino-3-oxopropyl]amino}-3-oxopropyl)-5-methylpyrimidin-4-yl]carbonyl}-beta-{2-O-[3-O-(aminocarbonyl)-alpha-D-mannopyranosyl]-alpha-L-gulopyranosyloxy}-N-[(1R,2S,3S)-5-({(1S,2R)-1-[({2-[4-({[3-(dimethylsulfonio)propyl]amino}carbonyl)-2,4'-bi-1,3-thiazol-2'-yl]ethyl}amino)carbonyl]-2-hydroxypropyl}amino)-3-hydroxy-4-methyl-5-oxopentan-2-yl]-L-histidinamide
InChIKey=OYVAGSVQBOHSSS-IIMGSDJHDB
CHEBI:3139
A bleomycin that has formula C55H84N17O21S3.
C55H84N17O21S3
InChI=1/C55H83N17O21S3/c1-20-33(69-46(72-44(20)58)25(12-31(57)76)64-13-24(56)45(59)82)50(86)71-35(41(26-14-61-19-65-26)91-54-43(39(80)37(78)29(15-73)90-54)92-53-40(81)42(93-55(60)88)38(79)30(16-74)89-53)51(87)66-22(3)36(77)21(2)47(83)70-34(23(4)75)49(85)63-10-8-32-67-28(18-94-32)52-68-27(17-95-52)48(84)62-9-7-11-96(5)6/h14,17-19,21-25,29-30,34-43,53-54,64,73-75,77-81H,7-13,15-16,56H2,1-6H3,(H13-,57,58,59,60,61,62,63,65,66,69,70,71,72,76,82,83,84,85,86,87,88)/p+1/t21-,22+,23+,24-,25-,29-,30+,34-,35-,36-,37+,38+,39-,40-,41-,42-,43-,53+,54-/m0/s1/fC55H84N17O21S3/h61-63,66,70-71H,57-60H2/q+1
Bleomycin
http://www.ebi.ac.uk/efo/EFO_0001494
bleomycin A2
N(1)-[3-(dimethylsulfonio)propyl]bleomycinamide
A plant body that is characteristic of thallophytes , lacks differentiation into distinct members (as stem, leaves, and roots), and does not grow from an apical point.[accessedResource: BTO:0001366][accessDate: 10-05-2010]
A plant body that is characteristic of thallophytes , lacks differentiation into distinct members (as stem, leaves, and roots), and does not grow from an apical point.
James Malone
BTO:0001366
thallus
a primitive plant body of gametophytes that has not differentiated into roots, stems or leaves
MAT:0000248
a primitive plant body of gametophytes that has not differentiated into roots, stems or leaves[accessedResource: MAT:0000248][accessDate: 10-05-2010]
Ele Holloway
AZ521
JCRB0061
James Malone
AZ-521
adipose tissue
FBbt:00005065
SAEL:2
BTO:0001487
The system of organs and cells involved in fat storage.
fat tissue
Connective tissue in which fat is stored and which has the cells distended by droplets of fat.
The system of organs and cells involved in fat storage.[accessedResource: FBbt:00005065][accessDate: 10-05-2010]
James Malone
MA:0000009
Connective tissue in which fat is stored and which has the cells distended by droplets of fat.[accessedResource: BTO:0001487][accessDate: 10-05-2010]
adipose tissue[accessedResource: BTO:0001487][accessDate: 10-05-2010]
EV:0100382
An organ system pertaining to fat.
MAT:0000488
Lateral is a geometric modifier describing something which is of or pertaining to the side.
lateral
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158746&type=germplasm
CS57722 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158746&type=germplasm
CS57722
James Malone
MO_694
secreted protein identification design
Tomasz Adamusiak
ZFS:0000024
segmentation 5-9 somites
James Malone
true
obsolete_pretreatment
dioxidosulfur
A sulfur oxide that has formula O2S.
oxosulfane oxide
SULFUR DIOXIDE
Schwefeldioxid
sulphur dioxide
InChI=1/O2S/c1-3-2
sulfurous oxide
Schwefel(IV)-oxid
http://www.ebi.ac.uk/efo/EFO_0001619
CHEBI:18422
O=S=O
O2S
InChIKey=RAHZWNYVWXNFOC-UHFFFAOYAT
sulfurous anhydride
SO2
S1
James Malone
Ele Holloway
primary motor cortex
somatomotor cortex
James Malone
Ele Holloway
myelodysplastic syndrome
James Malone
CL:0000162
oxyntic cell
oxyntic cell[accessedResource: CL:0000162][accessDate: 10-05-2010]
parietal cell
James Malone
HPAC
James Malone
Ele Holloway
GA10
James Malone
Ele Holloway
MFO:0003460
central posterior thalamic nucleus[accessedResource: TAO:0000182][accessDate: 10-05-2010]
sensory system
WBbt:0005832
sense organ
Multicellular anatomical structure with largely bona-fide boundary that transduces some sensory stimulus to the nervous system.
sense organ[accessedResource: MAT:0000031][accessDate: 10-05-2010]
sensory systems[accessedResource: ZFA:0000282][accessDate: 10-05-2010]
MAT:0000031
TAO:0000182
central posterior thalamic nucleus
central caudal thalamic nucleus
James Malone
AAO:0000555
central caudal thalamic nucleus[accessedResource: TAO:0000182][accessDate: 10-05-2010]
ZFA:0000282
sensory systems
FBbt:00005155
Multicellular anatomical structure with largely bona fide boundary that transduces some sensory stimulus to the nervous system.[accessedResource: FBbt:00005155][accessDate: 10-05-2010]
MA:0002442
MO_353
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Microgram_per_Kilogram_per_Day
milligram per kilogram per day
NCIH2195
James Malone
Ele Holloway
A biopsy number is an information entity about the numerical label given to a partciular biopsy obtained.
biopsy number
James Malone
James Malone
pm
picometre
A picometer is a length unit which is equal to 1m x 10^-12.
picometer
http://www.ebi.ac.uk/efo/EFO_0001722
true
UO:0000020
A length unit which is equal to 10^[-12] m.
mammary gland cell line
CHEBI:2666
InChI=1/C20H23N/c1-21(2)15-7-12-20-18-10-5-3-8-16(18)13-14-17-9-4-6-11-19(17)20/h3-6,8-12H,7,13-15H2,1-2H3
3-(10,11-dihydro-5H-dibenzo[a,d]cyclohepten-5-ylidene)-N,N-dimethylpropan-1-amine
http://www.ebi.ac.uk/efo/EFO_0001483
InChIKey=KRMDCWKBEZIMAB-UHFFFAOYAI
James Malone
A tricyclic antidepressant that has formula C20H23N.
C20H23N
5-(3-dimethylaminopropylidene)-10,11-dihydro-5H-dibenzo(a,d)cycloheptene
3-(10,11-dihydro-5H-dibenzo[a,d][7]annulen-5-ylidene)-N,N-dimethylpropan-1-amine
10,11-dihydro-N,N-dimethyl-5H-dibenzo(a,d)heptalene-Delta(5),gamma-propylamine
5-(3-dimethylaminopropylidene)-10,11-dihydro-5H-dibenzo(a,d)cycloheptatriene
5-(gamma-dimethylaminopropylidene)-5H-dibenzo[a,d][1,4]cycloheptadiene
3-(10,11-dihydro-5H-dibenzo(a,d)cyclohepten-5-ylidene)-N,N-dimethyl-1-propanamine
10,11-dihydro-5-(gamma-dimethylaminopropylidene)-5H-dibenzo(a,d)cycloheptene
Amitriptylin
amitriptyline
CN(C)CCC=C1c2ccccc2CCc2ccccc12
http://www.ebi.ac.uk/efo/EFO_0001876
CHEBI:48354
polar solvent
James Malone
C5H11NO2S
Hmet
2-amino-4-(methylthio)butanoic acid
A sulfur-containing amino acid that has formula C5H11NO2S.
2-amino-4-(methylsulfanyl)butanoic acid
InChIKey=FFEARJCKVFRZRR-QDQILVOLCH
CSCCC(N)C(O)=O
InChI=1/C5H11NO2S/c1-9-3-2-4(6)5(7)8/h4H,2-3,6H2,1H3,(H,7,8)/f/h7H
methionine
alpha-amino-gamma-methylmercaptobutyric acid
2-Amino-4-(methylthio)butyric acid
metionina
Methionin
hindlimb
SAEL:49
EMAPA:17458
James Malone
XAO:0003031
Lower limb
Lower extremity
MAT:0000395
EHDAA:6094
Inferior member[accessedResource: FMAID:7184][accessDate: 10-05-2010]
lower limb[accessedResource: MAT:0000395][accessDate: 10-05-2010]
Inferior member
BTO:0002345
Either of two extremities of four-footed non-primate land animals. It usually consists of a femur, tibia and fibula, tarsals, metatarsals, and toes.
Either of two extremities of four-footed non-primate land animals. It usually consists of a femur, tibia and fibula, tarsals, metatarsals, and toes.[accessedResource: BTO:0002345][accessDate: 10-05-2010]
FMAID:7184
Lower extremity[accessedResource: FMAID:7184][accessDate: 10-05-2010]
MA:0000026
EV:0100015
Cell that line the inner and outer surfaces of the body by forming cellular layers (epithelium) or masses (MSH).[accessedResource: NIFSTD:sao441624014][accessDate: 10-05-2010]
epithelial
James Malone
Tomasz Adamusiak
A cell that is usually found in a two-dimensional sheet with a free surface.
Cell that cover the surface of the body and line its cavities.[accessedResource: BTO:0000414][accessDate: 10-05-2010]
epithelial cell
BTO:0000414
Cell that cover the surface of the body and line its cavities.
NIFSTD:sao441624014
CL:0000066
A cell that is usually found in a two-dimensional sheet with a free surface.[accessedResource: CL:0000066][accessDate: 10-05-2010]
Cell that line the inner and outer surfaces of the body by forming cellular layers (epithelium) or masses (MSH).
OntologyMappingImporter following MAT:0000220
PO:0020147
apical root meristem
MAT:0000220
ZEA:0015150
James Malone
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0002729
InChIKey=QUEDXNHFTDJVIY-DQCZWYHMBO
(2R)-3,4-dihydro-2,7,8-trimethyl-2-[(4R,8R)-4,8,12-trimethyltridecyl]-2H-1-benzopyran-6-ol
7,8-dimethyltocol
CC(C)CCC[C@@H](C)CCC[C@@H](C)CCC[C@]1(C)CCc2cc(O)c(C)c(C)c2O1
(2R)-2,7,8-trimethyl-2-[(4R,8R)-4,8,12-trimethyltridecyl]-3,4-dihydro-2H-chromen-6-ol
C28H48O2
gamma-tocopherol
CHEBI:18185
A tocopherol that has formula C28H48O2.
D-gamma-tocopherol
Ele Holloway
InChI=1/C28H48O2/c1-20(2)11-8-12-21(3)13-9-14-22(4)15-10-17-28(7)18-16-25-19-26(29)23(5)24(6)27(25)30-28/h19-22,29H,8-18H2,1-7H3/t21-,22-,28-/m1/s1
ZFS:0000022
gastrula bud
James Malone
ZFS:0000016
blastula 30%-epiboly
James Malone
James Malone
A biconvex mass of gray matter on the medial side of the junction of the internal capsule and the crus cerebri; its chief connections are with the globus pallidus.[accessedResource: BTO:0002252][accessDate: 10-05-2010]
Lens-shaped structure on the inner aspect of the internal capsule. The subthalamic nucleus and pathways traversing this region are concerned with the integration of somatic motor function. (MeSH)
subthalamic nucleus
Luys' body[accessedResource: BTO:0002252][accessDate: 10-05-2010]
nucleus subthalamicus[accessedResource: BTO:0002252][accessDate: 10-05-2010]
A biconvex mass of gray matter on the medial side of the junction of the internal capsule and the crus cerebri; its chief connections are with the globus pallidus.
nucleus subthalamicus
Luys' body
nucleus of Luys[accessedResource: BTO:0002252][accessDate: 10-05-2010]
BTO:0002252
NCIt:C12454
Lens-shaped structure on the inner aspect of the internal capsule. The subthalamic nucleus and pathways traversing this region are concerned with the integration of somatic motor function. (MeSH)[accessedResource: NCIt:C12454][accessDate: 10-05-2010]
nucleus of Luys
BTO:0002382
JCRB1025
MKN7 cell[accessedResource: BTO:0002382][accessDate: 10-05-2010]
MKN7
MKN-7 cell[accessedResource: BTO:0002382][accessDate: 10-05-2010]
MKN7 cell
Ele Holloway
MKN-7 cell
Well differentiated human gastric adenocarcinoma cell line.
Well differentiated human gastric adenocarcinoma cell line.[accessedResource: BTO:0002382][accessDate: 10-05-2010]
MKN-7
James Malone
MO_498
The atmospheric conditions used to culture or grow an organism.
atmosphere
Tomasz Adamusiak
Jie Zheng
James Malone
CHEBI:50845
doxiciclina
doxycycline (anhydrous)
http://www.ebi.ac.uk/efo/EFO_0001528
5-hydroxy-alpha-6-deoxytetracycline
doxycyclinum
Doxycyclin
A tetracycline that has formula C22H24N2O8.
doxycycline
Supracyclin
Vibramycin
6alpha-deoxy-5-oxytetracycline
Jenacyclin
InChIKey=JBIWCJUYHHGXTC-RFTRKGKODR
C22H24N2O8
[H][C@@]12[C@@H](C)c3cccc(O)c3C(=O)C1=C(O)[C@]4(O)C(=O)C(C(N)=O)=C(O)[C@@H](N(C)C)[C@]4([H])[C@H]2O
InChI=1/C22H24N2O8/c1-7-8-5-4-6-9(25)11(8)16(26)12-10(7)17(27)14-15(24(2)3)18(28)13(21(23)31)20(30)22(14,32)19(12)29/h4-7,10,14-15,17,25,27-29,32H,1-3H3,(H2,23,31)/t7-,10+,14+,15-,17-,22-/m0/s1/f/h23H2
(4S,4aR,5S,5aR,6R,12aS)-4-(dimethylamino)-3,5,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-1,4,4a,5,5a,6,11,12a-octahydrotetracene-2-carboxamide
http://www.arabidopsis.org/servlets/TairObject?id=1005158701&type=germplasm
CS57677 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158695&type=germplasm
CS57677
James Malone
primary antiphospholipid syndrome
Antiphospholipid syndrome
antiphospholipid antibody syndrome
Antiphospholipid syndrome (disorder)[accessedResource: DOID:2988][accessDate: 10-05-2010]
DOID:2988
Antiphospholipid syndrome (disorder)
Antiphospholipid syndrome[accessedResource: DOID:2988][accessDate: 10-05-2010]
antiphospholipid antibody syndrome[accessedResource: DOID:2988][accessDate: 10-05-2010]
antiphospholipid syndrome
systemic lupus erythematosus
EV:0400043
systemic lupus erythematosus
James Malone
NCIt:C12445
Tomasz Adamusiak
BTO:0000232
A large dorsally projecting part of the brain concerned especially with the coordination of muscles and the maintenance of bodily equilibrium, situated between the brain stem and the back of the cerebrum , and formed in humans of two lateral lobes and a median lobe.
A large dorsally projecting part of the brain concerned especially with the coordination of muscles and the maintenance of bodily equilibrium, situated between the brain stem and the back of the cerebrum , and formed in humans of two lateral lobes and a median lobe.[accessedResource: BTO:0000232][accessDate: 10-05-2010]
NIFSTD:birnlex_1489
Cerebellar[accessedResource: NCIt:C12445][accessDate: 10-05-2010]
The portion of the brain located at the base of the skull that is responsible for balance, equilibrium and movement.
Cerebellar
The portion of the brain located at the base of the skull that is responsible for balance, equilibrium and movement.[accessedResource: NCIt:C12445][accessDate: 10-05-2010]
cerebellum
FMAID:85519
Embryonic endoderm
Embryonic endoderm[accessedResource: FMAID:85519][accessDate: 10-05-2010]
definitive endoderm
Tomasz Adamusiak
Jie Zheng
CL:0000218
A neuroglial cell of the peripheral nervous system which forms the insulating myelin sheaths of peripheral axons.
A neuroglial cell of the peripheral nervous system which forms the insulating myelin sheaths of peripheral axons.[accessedResource: CL:0000218][accessDate: 10-05-2010]
Schwann cell
James Malone
CTCL
Cutaneous T-cell lymphoma
true
Use of spiked in controls in a measurement of the spiked in external/internal ratio
external control ratio
HuNS-1
HuNS1
James Malone
Ele Holloway
James Malone
http://www.ebi.ac.uk/efo/EFO_0001852
xenobiotics
foreign"; bios "life
A xenobiotic (Greek, xenos "foreign"; bios "life") is a compound that is foreign to a living organism. Principal xenobiotics include: drugs, carcinogens and various compounds that have been introduced into the environment by artificial means.
CHEBI:35703
xenobiotic
xenobiotic compounds
NCIH1573
James Malone
Ele Holloway
Publication in preparation before submitting to a journal.
in preparation
Tomasz Adamusiak
ZFS:0000007
cleavage 64-cell
James Malone
PO:0004006
mesophyll cell
Tomasz Adamusiak
Cyclosporine
James Malone
A homodetic cyclic peptide that has formula C62H111N11O12.
InChI=1/C62H111N11O12/c1-25-27-28-40(15)52(75)51-56(79)65-43(26-2)58(81)67(18)33-48(74)68(19)44(29-34(3)4)55(78)66-49(38(11)12)61(84)69(20)45(30-35(5)6)54(77)63-41(16)53(76)64-42(17)57(80)70(21)46(31-36(7)8)59(82)71(22)47(32-37(9)10)60(83)72(23)50(39(13)14)62(85)73(51)24/h25,27,34-47,49-52,75H,26,28-33H2,1-24H3,(H,63,77)(H,64,76)(H,65,79)(H,66,78)/b27-25+/t40-,41+,42+,43-,44+,45-,46+,47+,49+,50-,51+,52-/m1/s1/f/h63-66H
ciclosporin
30-ethyl-33-[(4E)-1-hydroxy-2-methylhex-4-en-1-yl]-1,4,7,10,12,15,19,25,28-nonamethyl-6,9,18,24-tetrakis(2-methylpropyl)-3,21-bis(propan-2-yl)-1,4,7,10,13,16,19,22,25,28,31-undecaazacyclotritriacontane-2,5,8,11,14,17,20,23,26,29,32-undecone
CHEBI:4031
cyclosporin A
Neoral
(R-[R*,R*-(E)])-Cyclic(L-alanyl-D-alanyl-N-methyl-L-leucyl-N-methyl-L-leucyl-N-methyl-L-valyl-3-hydroxy-N,4-dimethyl-L-2-amino-6-octenoyl-L-alpha-aminobutyryl-N-methylglycyl-N-methyl-L-leucyl-L-valyl-N-methyl-L-leucyl)
1,11-cyclo[L-alanyl-D-alanyl-N-methyl-L-leucyl-N-methyl-L-leucyl-N-methyl-L-valyl-(E)-(2S,3R,4R)-2-amino-3-hydroxy-N,4-dimethyloct-6-enoyl-L-2-aminobutanoyl-N-methylglycyl-N-methyl-L-leucyl-L-valyl-N-methyl-L-leucine]
ciclosporina
Gengraf
C62H111N11O12
30-ethyl-33-[(4E)-1-hydroxy-2-methylhex-4-en-1-yl]-6,9,18,24-tetraisobutyl-3,21-diisopropyl-1,4,7,10,12,15,19,25,28-nonamethyl-1,4,7,10,13,16,19,22,25,28,31-undecaazacyclotritriacontane-2,5,8,11,14,17,20,23,26,29,32-undecone
http://www.ebi.ac.uk/efo/EFO_0001506
ciclosporine
CC[C@H]1NC(=O)[C@H]([C@H](O)[C@H](C)C\\C=C\\C)N(C)C(=O)[C@@H](C(C)C)N(C)C(=O)[C@H](CC(C)C)N(C)C(=O)[C@H](CC(C)C)N(C)C(=O)[C@H](C)NC(=O)[C@H](C)NC(=O)[C@@H](CC(C)C)N(C)C(=O)[C@@H](NC(=O)[C@H](CC(C)C)N(C)C(=O)CN(C)C1=O)C(C)C
Sandimmune
Cyclo(L-alanyl-D-alanyl-N-methyl-L-leucyl-N-methyl-L-leucyl-N-methyl-L-valyl-((3R,4R,6E)-6,7-didehydro-3-hydroxy-N,4-dimethyl-L-2-aminooctanoyl)-L-2-aminobutanoyl-N-methylglycyl-N-methyl-L-leucyl-L-valyl-N-methylleucyl)
Antibiotic S 7481F1
ciclosporinum
InChIKey=PMATZTZNYRCHOR-MDVWSCMIDT
http://www.ebi.ac.uk/efo/EFO_0001816
CHEBI:22333
Highly reactive chemical that introduces alkyl radicals into biologically active molecules and thereby prevents their proper functioning. It could be used as an antineoplastic agent, but it might be very toxic, with carcinogenic, mutagenic, teratogenic, and immunosuppressant actions. It could also be used as a component of poison gases.
alkylating agent
James Malone
Intervention or Procedure
NCIt:C25218
Tomasz Adamusiak
Procedure[accessedResource: NCIt:C25218][accessDate: 10-05-2010]
Jie Zheng
Intervention[accessedResource: NCIt:C25218][accessDate: 10-05-2010]
medical procedure
SURGICAL AND MEDICAL PROCEDURES
Interventional[accessedResource: NCIt:C25218][accessDate: 10-05-2010]
An activity that produces an effect, or that is intended to alter the course of a disease in a patient or population. This is a general term that encompasses the medical, social, behavioral, and environmental acts that can have preventive, therapeutic, or palliative effects.[accessedResource: NCIt:C25218][accessDate: 10-05-2010]
An activity that produces an effect, or that is intended to alter the course of a disease in a patient or population. This is a general term that encompasses the medical, social, behavioral, and environmental acts that can have preventive, therapeutic, or palliative effects.
Intervention Strategies
SURGICAL AND MEDICAL PROCEDURES[accessedResource: NCIt:C25218][accessDate: 10-05-2010]
Interventional
Intervention Strategies[accessedResource: NCIt:C25218][accessDate: 10-05-2010]
Intervention or Procedure[accessedResource: NCIt:C25218][accessDate: 10-05-2010]
Procedure
Intervention
information content entity
An information entity is an entity that represents information about some other entity. For example, a measurement, a clustered data set.
information
James Malone
true
information entity
an information content entity is an entity that is generically dependent on some artifact and stands in relation of aboutness to some entity
http://www.ebi.ac.uk/efo/EFO_0001435
BC1
James Malone
BC-1
Ele Holloway
N(6)-(benzylamino)purine
Cytokinin B
benzyladenine
http://www.ebi.ac.uk/efo/EFO_0001577
BAP
N-benzyladenine
C(Nc1ncnc2[nH]cnc12)c1ccccc1
InChIKey=NWBJYWHLCVSVIJ-YENFCIRVCT
6-(benzylamino)purine
N-benzyl-9H-purin-6-amine
InChI=1/C12H11N5/c1-2-4-9(5-3-1)6-13-11-10-12(15-7-14-10)17-8-16-11/h1-5,7-8H,6H2,(H2,13,14,15,16,17)/f/h13,15H
6-BAP
A 6-aminopurine that has formula C12H11N5.
N6-Benzyladenine
6-[(phenylmethyl)amino]-9H-purine
CHEBI:29022
C12H11N5
SKIN AND SUBCUTANEOUS TISSUE DISORDERS
Skin Diseases and Manifestations
Cutaneous Disorder
skin disease
Skin Disorder
Cutaneous Disorder[accessedResource: NCIt:C3371][accessDate: 10-05-2010]
SKIN AND SUBCUTANEOUS TISSUE DISORDERS[accessedResource: NCIt:C3371][accessDate: 10-05-2010]
Skin Diseases and Manifestations[accessedResource: NCIt:C3371][accessDate: 10-05-2010]
Any deviation from the normal structure or function of the skin or subcutaneous tissue that is manifested by a characteristic set of symptoms and signs.
NCIt:C3371
Skin Disorder[accessedResource: NCIt:C3371][accessDate: 10-05-2010]
James Malone
Any deviation from the normal structure or function of the skin or subcutaneous tissue that is manifested by a characteristic set of symptoms and signs.[accessedResource: NCIt:C3371][accessDate: 10-05-2010]
GLI60
James Malone
hematological neoplasm
hematological cancer
blood cancer
lymphoid neoplasm
Tomasz Adamusiak
James Malone
anti-inflammatory drugs
anti-inflammatory agent
http://www.ebi.ac.uk/efo/EFO_0001837
CHEBI:35472
A substance that reduces or suppresses inflammation.
anti-inflammatory drug
James Malone
GeneRIF:15793859
GeneRIF:15292938
GeneRIF:15655821
GeneRIF:11987129
GeneRIF:15946916
Other ulcerative colitis (disorder)
ULCERATVE COLITIS UNSPCF
GeneRIF:12725330
ICD9:556.9
UC - ulcerative colitis
Other ulcerative colitis
GeneRIF:15007304
GeneRIF:11904678
GeneRIF:12112311
GeneRIF:12139949
MSH:D003093
GeneRIF:12133438
ICD9:556
GeneRIF:12878361
ulcerative colitis (disorder)[accessedResource: DOID:8577][accessDate: 10-05-2010]
GeneRIF:15188158
GeneRIF:12100519
GeneRIF:15550998
GeneRIF:11956656
GeneRIF:15288468
GeneRIF:12133437
GeneRIF:11953203
GeneRIF:12465728
GeneRIF:15944317
GeneRIF:14627676
GeneRIF:12572877
Other ulcerative colitis (disorder)[accessedResource: DOID:8577][accessDate: 10-05-2010]
GeneRIF:12842452
GeneRIF:16149136
GeneRIF:16015687
GeneRIF:12730867
GeneRIF:12109441
GeneRIF:14597776
GeneRIF:14611908
GeneRIF:15628695
GeneRIF:15973119
GeneRIF:15685540
UC - ulcerative colitis[accessedResource: DOID:8577][accessDate: 10-05-2010]
Inflammation of the COLON that is predominantly confined to the MUCOSA. Its major symptoms include DIARRHEA, rectal BLEEDING, the passage of MUCUS, and ABDOMINAL PAIN.
GeneRIF:14731353
Inflammation of the COLON that is predominantly confined to the MUCOSA. Its major symptoms include DIARRHEA, rectal BLEEDING, the passage of MUCUS, and ABDOMINAL PAIN.[accessedResource: MSH:D003093][accessDate: 10-05-2010]
GeneRIF:12486609
GeneRIF:15905704
GeneRIF:12460892
GeneRIF:14617036
GeneRIF:15102868
James Malone
GeneRIF:15188166
GeneRIF:15046221
GeneRIF:12707342
Ulcerative colitis (disorder)
GeneRIF:15052696
GeneRIF:12598727
GeneRIF:11737306
GeneRIF:12011151
Ulcerative colitis, unspecified
Ulcerative colitis, unspecified[accessedResource: ICD9:556.9][accessDate: 10-05-2010]
Other ulcerative colitis[accessedResource: DOID:8577][accessDate: 10-05-2010]
GeneRIF:15146247
GeneRIF:11920497
GeneRIF:15248378
ULCERATVE COLITIS UNSPCF[accessedResource: ICD9:556.9][accessDate: 10-05-2010]
ulcerative colitis
GeneRIF:15935984
GeneRIF:15284119
DOID:8577
GeneRIF:14525977
GeneRIF:12617879
GeneRIF:12512026
GeneRIF:15755919
GeneRIF:14669348
GeneRIF:16158332
http://www.arabidopsis.org/servlets/TairObject?id=1005158639&type=germplasm
CS57615 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158639&type=germplasm
CS57615
James Malone
InChI=1/C27H44O6/c1-15(2)6-7-23(31)26(5,32)22-9-11-27(33)17-12-19(28)18-13-20(29)21(30)14-24(18,3)16(17)8-10-25(22,27)4/h12,15-16,18,20-23,29-33H,6-11,13-14H2,1-5H3/t16-,18-,20+,21-,22-,23+,24+,25+,26+,27+/m0/s1
(22R)-2beta,3beta,14,20,22-pentahydroxy-5beta-cholest-7-en-6-one
InChIKey=PJYYBCXMCWDUAZ-JJJZTNILBL
[H][C@]12CC[C@]3(C)[C@]([H])(CC[C@@]3(O)C1=CC(=O)[C@]1([H])C[C@@H](O)[C@@H](O)C[C@]21C)[C@@](C)(O)[C@H](O)CCC(C)C
ponasterone A
C27H44O6
CHEBI:28135
http://www.ebi.ac.uk/efo/EFO_0001594
A 14alpha-hydroxy steroid that has formula C27H44O6.
25-Deoxycedysterone
GM12874
James Malone
GM12144
James Malone
NCIt:C12669
FMAID:3734
aorta
dorsal aortic root[accessedResource: ZFA:0000014][accessDate: 10-05-2010]
BTO:0000135
SAEL:6
MAT:0000035
Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery.
Aortic
Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery. Kimmel et al, 1995.[accessedResource: TAO:0000014][accessDate: 10-05-2010]
dorsal aorta[accessedResource: MAT:0000035][accessDate: 10-05-2010]
Aortic[accessedResource: NCIt:C12669][accessDate: 10-05-2010]
James Malone
Trunk of aortic tree
TAO:0000014
Trunk of systemic arterial tree[accessedResource: FMAID:3734][accessDate: 10-05-2010]
ZFA:0000014
Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery.[accessedResource: ZFA:0000014][accessDate: 10-05-2010]
The great arterial trunk that carries blood from the heart to be distributed by branch arteries through the body.[accessedResource: BTO:0000135][accessDate: 10-05-2010]
dorsal aortic root
Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery. Kimmel et al, 1995.
DA
MA:0000476
DA[accessedResource: TAO:0000014][accessDate: 10-05-2010]
TADS:0000154
dorsal aorta
EV:0100027
The major arterial trunk that carries oxygenated blood from the left ventricle into the ascending aorta behind the heart, the aortic arch, through the thorax as the descending aorta and through the abdomen as the abdominal aorta; it bifurcates into the left and right common iliac arteries.
The great arterial trunk that carries blood from the heart to be distributed by branch arteries through the body.
Trunk of systemic arterial tree
Trunk of aortic tree[accessedResource: FMAID:3734][accessDate: 10-05-2010]
The major arterial trunk that carries oxygenated blood from the left ventricle into the ascending aorta behind the heart, the aortic arch, through the thorax as the descending aorta and through the abdomen as the abdominal aorta; it bifurcates into the left and right common iliac arteries.[accessedResource: NCIt:C12669][accessDate: 10-05-2010]
XAO:0003010
FBbt:00003153
MO_697
http://www.ebi.ac.uk/efo/EFO_0002016
An arrayer is an instrument which deposits biological material onto a substrate in a defined pattern.
arrayer
James Malone
The specialized accessory gland of the skin of female mammals that secretes milk. In the human female, it is a compound tubuloalveolar gland composed of 15 to 25 lobes arranged radially about the nipple and separated by connective and adipose tissue, each lobe having its own excretory (lactiferous) duct opening on the nipple. The lobes are subdivided into lobules, with the alveolar ducts and alveoli being the secretory portion of the gland.[accessedResource: BTO:0000817][accessDate: 10-05-2010]
SAEL:64
Lactiferous gland
glandula mammaria
Lobe of mammary gland
MAT:0000073
mamma
Lobe of mammary gland[accessedResource: FMAID:62088][accessDate: 10-05-2010]
lactiferous gland[accessedResource: MAT:0000073][accessDate: 10-05-2010]
EMAPA:17759
mamma[accessedResource: BTO:0000817][accessDate: 10-05-2010]
MA:0000145
Lobe of breast
Lobular organ which consist of a lactiferous duct tree and the set of lactiferous acini that are connected to duct tree. Examples: There are variable numbers of lactiferous duct trees.
The specialized accessory gland of the skin of female mammals that secretes milk. In the human female, it is a compound tubuloalveolar gland composed of 15 to 25 lobes arranged radially about the nipple and separated by connective and adipose tissue, each lobe having its own excretory (lactiferous) duct opening on the nipple. The lobes are subdivided into lobules, with the alveolar ducts and alveoli being the secretory portion of the gland.
EHDAA:6522
Lobular organ which consist of a lactiferous duct tree and the set of lactiferous acini that are connected to duct tree. Examples: There are variable numbers of lactiferous duct trees.[accessedResource: FMAID:62088][accessDate: 10-05-2010]
James Malone
BTO:0000817
FMAID:62088
Lobe of breast[accessedResource: FMAID:62088][accessDate: 10-05-2010]
EV:0100125
mammary gland
glandula mammaria[accessedResource: BTO:0000817][accessDate: 10-05-2010]
http://en.wikipedia.org/wiki/Grivet
grivet
African green monkey
http://www.ebi.ac.uk/efo/EFO_0002638
The Grivet (Chlorocebus aethiops) is an Old World monkey with long white tufts of hair along the sides of the face.
Chlorocebus aethiops
James Malone
Pons Cerebelli
Pons Cerebelli[accessedResource: NCIt: C12511][accessDate: 10-05-2010]
A broad mass of chiefly transverse nerve fibers conspicuous on the ventral surface of the brain of man and lower mammals at the anterior end of the medulla oblongata.
Pons Varolii[accessedResource: NCIt: C12511][accessDate: 10-05-2010]
NCIt: C12511
James Malone
Pons Varolii
NIFSTD:birnlex_733
The middle portion of the brainstem located between the midbrain and the medulla oblongata. The fourth ventricle lies dorsal to the pons which also contains the motor trigeminal nuclei and the abducens nuclei. The cerebellum contributes a large number of afferent fibers to the pons.
The middle portion of the brainstem located between the midbrain and the medulla oblongata. The fourth ventricle lies dorsal to the pons which also contains the motor trigeminal nuclei and the abducens nuclei. The cerebellum contributes a large number of afferent fibers to the pons.[accessedResource: NCIt: C12511][accessDate: 10-05-2010]
A broad mass of chiefly transverse nerve fibers conspicuous on the ventral surface of the brain of man and lower mammals at the anterior end of the medulla oblongata.[accessedResource: BTO:0001101][accessDate: 10-05-2010]
BTO:0001101
Tomasz Adamusiak
pons
Cerebral Cortex[accessedResource: NCIt:C12443][accessDate: 10-05-2010]
cortex is ambiguous as class under brain so removed
Cortical
brain cortex
true
Cortex[accessedResource: NCIt:C12443][accessDate: 10-05-2010]
Cortical[accessedResource: NCIt:C12443][accessDate: 10-05-2010]
Cerebral Cortex
James Malone
Cortex
brain cortex[accessedResource: BTO:0000233][accessDate: 10-05-2010]
The surface layer of gray matter of the cerebrum that functions chiefly in coordination of sensory and motor information.[accessedResource: BTO:0000233][accessDate: 10-05-2010]
1.8
NCIt:C12443
BTO:0000233
The surface layer of gray matter of the cerebrum that functions chiefly in coordination of sensory and motor information.
NIFSTD:birnlex_1494
Tomasz Adamusiak
obsolete_cortex
O3
Ozon
ozone
CHEBI:25812
A triatomic oxygen that has formula O3.
ozono
trioxygene
[OO2]
http://www.ebi.ac.uk/efo/EFO_0002676
InChI=1/O3/c1-3-2
Trisauerstoff
[O-][O+]=O
InChIKey=CBENFWSGALASAD-UHFFFAOYAY
trioxygen
gastrula 80%-epiboly
Tomasz Adamusiak
Jie Zheng
birnlex_7072
Theiler stage 17
Tomasz Adamusiak
Jie Zheng
renal Wilms tumor
Nephroblastoma (disorder)[accessedResource: DOID:2154][accessDate: 10-05-2010]
renal Wilms tumor[accessedResource: DOID:2154][accessDate: 10-05-2010]
Tomasz Adamusiak
Nephroblastoma (disorder)
Nephroblastoma (morphologic abnormality)[accessedResource: DOID:2154][accessDate: 10-05-2010]
Nephroblastoma NOS[accessedResource: DOID:2154][accessDate: 10-05-2010]
Nephroblastoma (morphologic abnormality)
A malignant mixed tumor that affects the kidneys and typically occurs in children.
DOID:2154
nephroblastoma
nephroblastoma[accessedResource: DOID:2154][accessDate: 10-05-2010]
A malignant mixed tumor that affects the kidneys and typically occurs in children.[accessedResource: DOID:2154][accessDate: 10-05-2010]
Wilms tumor
Nephroblastoma NOS
GeneRIF:12399463
GeneRIF:12739786
GeneRIF:15325803
GeneRIF:12684695
GeneRIF:12784384
GeneRIF:15241467
Proliferative arthritis
GeneRIF:15077293
GeneRIF:12913926
GeneRIF:12870871
GeneRIF:12823854
GeneRIF:12509789
GeneRIF:15313475
GeneRIF:11961170
Rheumatoid arthritis NOS
GeneRIF:12937131
GeneRIF:11472854
GeneRIF:15031666
GeneRIF:12858434
GeneRIF:15986374
GeneRIF:15641088
GeneRIF:12913938
GeneRIF:16192646
GeneRIF:15794197
NCIt:C27206
GeneRIF:11294880
GeneRIF:12115161
GeneRIF:12571844
GeneRIF:11856352
SNOMEDCT:69896004
GeneRIF:16215318
GeneRIF:15272075
rheumatoid arthritis
GeneRIF:15464974
GeneRIF:12486608
GeneRIF:15603867
GeneRIF:12672182
GeneRIF:12193472
GeneRIF:15077296
GeneRIF:15890884
GeneRIF:12966588
GeneRIF:12847682
GeneRIF:12879272
GeneRIF:12723989
GeneRIF:14872483
GeneRIF:12115177
GeneRIF:14707104
GeneRIF:15338479
GeneRIF:12846056
GeneRIF:12060849
GeneRIF:15290725
GeneRIF:15950180
GeneRIF:15593216
Rheumatoid arthritis is a rheumatologic disorder described as an autoimmune disease that is usually a chronic disease and is characterized especially by pain, stiffness, inflammation, swelling, and sometimes destruction of joints.[accessedResource: DOID:7148][accessDate: 10-05-2010]
GeneRIF:14558082
GeneRIF:12508778
GeneRIF:16200580
GeneRIF:12242722
GeneRIF:15188357
GeneRIF:12826377
GeneRIF:12846052
GeneRIF:15167967
GeneRIF:14687710
GeneRIF:12808103
GeneRIF:12571842
GeneRIF:12140750
MSH:D001172
GeneRIF:15457473
GeneRIF:14630402
Rheumatoid arthritis NOS (disorder)
GeneRIF:15751070
GeneRIF:12039073
DOID:7148
GeneRIF:15208781
GeneRIF:15535837
GeneRIF:15290745
GeneRIF:14994383
GeneRIF:12651614
NCIt:C2884
GeneRIF:15877293
GeneRIF:12632415
GeneRIF:14532992
GeneRIF:15759013
GeneRIF:12413610
GeneRIF:14734742
A chronic systemic disease, primarily of the joints, marked by inflammatory changes in the synovial membranes and articular structures, widespread fibrinoid degeneration of the collagen fibers in mesenchymal tissues, and by atrophy and rarefaction of bony structures. Etiology is unknown, but autoimmune mechanisms have been implicated.
GeneRIF:15638044
Chronic rheumatic arthritis[accessedResource: SNOMEDCT:69896004][accessDate: 10-05-2010]
GeneRIF:12115181
GeneRIF:12905469
GeneRIF:11466388
GeneRIF:12784383
GeneRIF:11708406
GeneRIF:14749527
GeneRIF:12913925
GeneRIF:14558087
GeneRIF:11916172
GeneRIF:12705898
GeneRIF:16014623
GeneRIF:12401808
GeneRIF:15967793
GeneRIF:15184985
GeneRIF:12610796
GeneRIF:14976209
GeneRIF:11949889
GeneRIF:12454286
GeneRIF:15022344
GeneRIF:15457447
GeneRIF:12847274
GeneRIF:16175503
GeneRIF:16014635
Rheumatic gout[accessedResource: SNOMEDCT:69896004][accessDate: 10-05-2010]
GeneRIF:15875058
SNOMEDCT:287010008
GeneRIF:12553721
GeneRIF:11838837
GeneRIF:15007027
GeneRIF:15083890
atrophic Arthritis[accessedResource: DOID:7148][accessDate: 10-05-2010]
GeneRIF:12209506
GeneRIF:12070776
GeneRIF:11733367
GeneRIF:14730602
GeneRIF:12114257
GeneRIF:15725578
GeneRIF:15290728
GeneRIF:11983200
Rheumatoid arthritis (disorder)[accessedResource: DOID:7148][accessDate: 10-05-2010]
GeneRIF:16052590
GeneRIF:15529384
Rheumatoid disease
GeneRIF:15971427
GeneRIF:15077295
GeneRIF:15517620
GeneRIF:15896202
GeneRIF:12635863
GeneRIF:15591039
GeneRIF:14608356
GeneRIF:15188353
GeneRIF:15457444
GeneRIF:12208866
GeneRIF:15743888
GeneRIF:16098099
Rheumatoid arthritis is a rheumatologic disorder described as an autoimmune disease that is usually a chronic disease and is characterized especially by pain, stiffness, inflammation, swelling, and sometimes destruction of joints.
GeneRIF:12193736
GeneRIF:15254248
GeneRIF:12574395
GeneRIF:14994386
GeneRIF:11971877
GeneRIF:12739037
GeneRIF:16107870
GeneRIF:15022318
James Malone
GeneRIF:12091338
GeneRIF:12374691
GeneRIF:14979058
GeneRIF:12119414
GeneRIF:15940757
Rheumatoid arthritis NOS[accessedResource: SNOMEDCT:287010008][accessDate: 10-05-2010]
GeneRIF:12833157
GeneRIF:12097415
GeneRIF:15022314
Rheumatic gout
GeneRIF:15641039
GeneRIF:15284119
GeneRIF:11857065
GeneRIF:15634264
GeneRIF:15641066
GeneRIF:12643440
GeneRIF:12444174
GeneRIF:12782719
GeneRIF:12847677
GeneRIF:16151416
GeneRIF:12067756
GeneRIF:12847280
GeneRIF:16142859
GeneRIF:15742432
GeneRIF:15850806
GeneRIF:15248212
GeneRIF:12528108
Chronic rheumatic arthritis
A chronic systemic disease, primarily of the joints, marked by inflammatory changes in the synovial membranes and articular structures, widespread fibrinoid degeneration of the collagen fibers in mesenchymal tissues, and by atrophy and rarefaction of bony structures. Etiology is unknown, but autoimmune mechanisms have been implicated.[accessedResource: NCIt:C2884][accessDate: 10-05-2010]
GeneRIF:12702665
RA - Rheumatoid arthritis
Rheumatoid disease[accessedResource: SNOMEDCT:69896004][accessDate: 10-05-2010]
GeneRIF:14984939
GeneRIF:16127156
GeneRIF:12465141
GeneRIF:14617033
GeneRIF:12235453
GeneRIF:12114309
GeneRIF:16320327
Arthritis or polyarthritis, rheumatic[accessedResource: DOID:7148][accessDate: 10-05-2010]
GeneRIF:12089610
GeneRIF:15632153
GeneRIF:12707342
GeneRIF:12759455
GeneRIF:12847680
Proliferative arthritis[accessedResource: SNOMEDCT:69896004][accessDate: 10-05-2010]
ICD9:714.0
RhA - Rheumatoid arthritis[accessedResource: SNOMEDCT:69896004][accessDate: 10-05-2010]
GeneRIF:14647385
RhA - Rheumatoid arthritis
GeneRIF:11920278
GeneRIF:15259375
GeneRIF:15753214
GeneRIF:15723199
GeneRIF:15045639
GeneRIF:12697270
GeneRIF:15569925
GeneRIF:11906819
GeneRIF:15146412
GeneRIF:12047361
GeneRIF:15170914
GeneRIF:11861275
GeneRIF:14578453
GeneRIF:12054474
GeneRIF:12135431
GeneRIF:16287870
Rheumatoid arthritis NOS (disorder)[accessedResource: DOID:7148][accessDate: 10-05-2010]
GeneRIF:11708408
GeneRIF:12175089
GeneRIF:11801682
GeneRIF:15381082
GeneRIF:14705216
GeneRIF:16038875
GeneRIF:15761492
GeneRIF:12183385
GeneRIF:16134725
GeneRIF:15389525
Arthritis or polyarthritis, rheumatic
GeneRIF:12165497
GeneRIF:11922198
GeneRIF:15794198
GeneRIF:12913922
GeneRIF:15205567
GeneRIF:15163116
GeneRIF:15841095
GeneRIF:12070782
GeneRIF:12564836
GeneRIF:16200584
GeneRIF:14505215
GeneRIF:16288117
GeneRIF:12847683
GeneRIF:12508775
GeneRIF:12734884
GeneRIF:11966773
GeneRIF:12064825
GeneRIF:15146416
GeneRIF:12168808
GeneRIF:14726963
GeneRIF:15641073
GeneRIF:13130464
RA - Rheumatoid arthritis[accessedResource: SNOMEDCT:69896004][accessDate: 10-05-2010]
GeneRIF:12928381
GeneRIF:15879144
GeneRIF:15515123
GeneRIF:11881821
Rheumatoid arthritis (disorder)
GeneRIF:15859024
GeneRIF:15077297
GeneRIF:12846053
atrophic Arthritis
GeneRIF:12517948
GeneRIF:15022325
GeneRIF:12594835
GeneRIF:12793199
GeneRIF:12508786
GeneRIF:15470519
GeneRIF:14558083
GeneRIF:12233877
GeneRIF:12846065
GeneRIF:11725485
GeneRIF:15022315
GeneRIF:16200608
GeneRIF:15146411
GeneRIF:14991531
GeneRIF:15457442
GeneRIF:16329077
GeneRIF:15934099
GeneRIF:16002730
GeneRIF:12610797
GeneRIF:12718750
GeneRIF:15959531
GeneRIF:12095257
GeneRIF:14872281
GeneRIF:14749980
GeneRIF:15170913
GeneRIF:12233873
GeneRIF:16366416
Formerly class "current milliamperes"
The measure of movement of electrical charges in a conductor measured in milliamperes.
electrical current
James Malone
L3055
James Malone
GeneRIF:12816863
GeneRIF:11771735
James Malone
GeneRIF:12576745
GeneRIF:15804423
Partial Trisomy 21 Down Syndrome
T21 - Trisomy 21[accessedResource: SNOMEDCT:41040004][accessDate: 10-05-2010]
Down's syndrome - trisomy 21
GeneRIF:15068237
GeneRIF:12957488
GeneRIF:15068254
Down's Syndrome
DOID:14250
GeneRIF:11824616
GeneRIF:12400059
Complete trisomy 21 syndrome (disorder)
GeneRIF:12796830
GeneRIF:15068242
Complete trisomy 21 syndrome[accessedResource: SNOMEDCT:41040004][accessDate: 10-05-2010]
GeneRIF:12393509
GeneRIF:11771751
Trisomy 21, Mitotic Nondisjunction
GeneRIF:15169762
GeneRIF:14678752
GeneRIF:12628594
GeneRIF:11565556
Down's syndrome NOS
G Trisomy
GeneRIF:12650976
GeneRIF:12943237
GeneRIF:15255950
GeneRIF:11856873
GeneRIF:16222229
Down's syndrome NOS[accessedResource: SNOMEDCT:254263008][accessDate: 10-05-2010]
ICD9:758.0
GeneRIF:12200143
GeneRIF:15184603
Trisomy 21
GeneRIF:14701734
GeneRIF:12032275
GeneRIF:15820773
GeneRIF:14738882
A chromosomal dysgenesis syndrome resulting from a triplication or translocation of chromosome 21. Down syndrome occurs in approximately 1:700 live births. Abnormalities are variable from individual to individual and may include mental retardation, retarded growth, flat hypoplastic face with short nose, prominent epicanthic skin folds, small low-set ears with prominent antihelix, fissured and thickened tongue, laxness of joint ligaments, pelvic dysplasia, broad hands and feet, stubby fingers, transverse palmar crease, lenticular opacities and heart disease. Patients with Down syndrome have an estimated 10 to 30-fold increased risk for leukemia; most have symptoms of Alzheimer's disease by age 40. Also known as trisomy 21 syndrome. --2004[accessedResource: NCIt:C2993][accessDate: 10-05-2010]
Mongolism
GeneRIF:11331941
GeneRIF:12172547
GeneRIF:15103709
GeneRIF:12586620
GeneRIF:15946822
GeneRIF:11771755
GeneRIF:12931206
GeneRIF:11771736
trisomy 21 syndrome[accessedResource: DOID:14250][accessDate: 10-05-2010]
T21 - Trisomy 21
GeneRIF:11879646
Trisomy 21, Meiotic Nondisjunction[accessedResource: MSH:D004314][accessDate: 10-05-2010]
GeneRIF:16231093
GeneRIF:14636651
GeneRIF:11771746
Down's syndrome NOS (disorder)
GeneRIF:12499044
GeneRIF:15068244
GeneRIF:12923861
Mongolism[accessedResource: SNOMEDCT:41040004][accessDate: 10-05-2010]
GeneRIF:15068241
GeneRIF:12895444
Trisomy 21[accessedResource: MSH:D004314][accessDate: 10-05-2010]
GeneRIF:15661359
Complete trisomy 21 syndrome
SNOMEDCT:41040004
GeneRIF:16274669
GeneRIF:15068251
GeneRIF:15694837
Down's syndrome - trisomy 21[accessedResource: DOID:14250][accessDate: 10-05-2010]
Trisomy 21, Meiotic Nondisjunction
Trisomy 21, Mitotic Nondisjunction[accessedResource: MSH:D004314][accessDate: 10-05-2010]
Tomasz Adamusiak
Partial Trisomy 21 Down Syndrome[accessedResource: MSH:D004314][accessDate: 10-05-2010]
Trisomy 21 NOS
Trisomy 21 Syndrome
A chromosome disorder associated either with an extra chromosome 21 or an effective trisomy for chromosome 21. Clinical manifestations include hypotonia, short stature, brachycephaly, upslanting palpebral fissures, epicanthus, Brushfield spots on the iris, protruding tongue, small ears, short, broad hands, fifth finger clinodactyly, Simian crease, and moderate to severe MENTAL RETARDATION. Cardiac and gastrointestinal malformations, a marked increase in the incidence of LEUKEMIA, and the early onset of ALZHEIMER DISEASE are also associated with this condition. Pathologic features include the development of NEUROFIBRILLARY TANGLES in neurons and the deposition of AMYLOID BETA-PROTEIN, similar to the pathology of ALZHEIMER DISEASE. (Menkes, Textbook of Child Neurology, 5th ed, p213)[accessedResource: MSH:D004314][accessDate: 10-05-2010]
GeneRIF:12070657
NIFSTD:nlx_dys_20090502
A disorder caused by the presence of all or part of an extra 21st chromosome, characterized by structural abnormalities throughout the body. Often Down syndrome is associated with some impairment of cognitive ability and physical growth as well as facial appearance. (Adapted from Wikipedia)
GeneRIF:11920898
GeneRIF:12109594
GeneRIF:11771757
GeneRIF:15068245
GeneRIF:11771738
GeneRIF:14656875
GeneRIF:12080391
GeneRIF:12459318
GeneRIF:11771745
A chromosomal dysgenesis syndrome resulting from a triplication or translocation of chromosome 21. Down syndrome occurs in approximately 1:700 live births. Abnormalities are variable from individual to individual and may include mental retardation, retarded growth, flat hypoplastic face with short nose, prominent epicanthic skin folds, small low-set ears with prominent antihelix, fissured and thickened tongue, laxness of joint ligaments, pelvic dysplasia, broad hands and feet, stubby fingers, transverse palmar crease, lenticular opacities and heart disease. Patients with Down syndrome have an estimated 10 to 30-fold increased risk for leukemia; most have symptoms of Alzheimer's disease by age 40. Also known as trisomy 21 syndrome. --2004
Down's syndrome[accessedResource: NIFSTD:nlx_dys_20090502][accessDate: 10-05-2010]
GeneRIF:11771762
GeneRIF:15068243
GeneRIF:11771750
MSH:D004314
GeneRIF:12771203
GeneRIF:11771764
GeneRIF:11810642
GeneRIF:12767918
G Trisomy[accessedResource: DOID:14250][accessDate: 10-05-2010]
GeneRIF:12359327
Complete trisomy 21 syndrome (disorder)[accessedResource: SNOMEDCT:41040004][accessDate: 10-05-2010]
NCIt:C2993
GeneRIF:14615042
GeneRIF:14512321
GeneRIF:11771749
GeneRIF:12529699
Trisomy 21 NOS[accessedResource: SNOMEDCT:254263008][accessDate: 10-05-2010]
GeneRIF:12145461
GeneRIF:12515899
GeneRIF:15082224
A disorder caused by the presence of all or part of an extra 21st chromosome, characterized by structural abnormalities throughout the body. Often Down syndrome is associated with some impairment of cognitive ability and physical growth as well as facial appearance. (Adapted from Wikipedia)[accessedResource: NIFSTD:nlx_dys_20090502][accessDate: 10-05-2010]
SNOMEDCT:254263008
GeneRIF:15358155
GeneRIF:11771758
GeneRIF:12469345
GeneRIF:15068239
Down syndrome
A chromosome disorder associated either with an extra chromosome 21 or an effective trisomy for chromosome 21. Clinical manifestations include hypotonia, short stature, brachycephaly, upslanting palpebral fissures, epicanthus, Brushfield spots on the iris, protruding tongue, small ears, short, broad hands, fifth finger clinodactyly, Simian crease, and moderate to severe MENTAL RETARDATION. Cardiac and gastrointestinal malformations, a marked increase in the incidence of LEUKEMIA, and the early onset of ALZHEIMER DISEASE are also associated with this condition. Pathologic features include the development of NEUROFIBRILLARY TANGLES in neurons and the deposition of AMYLOID BETA-PROTEIN, similar to the pathology of ALZHEIMER DISEASE. (Menkes, Textbook of Child Neurology, 5th ed, p213)
Down's syndrome NOS (disorder)[accessedResource: SNOMEDCT:254263008][accessDate: 10-05-2010]
plant growth retardants
plant growth inhibitors
plant growth inhibitor
http://www.ebi.ac.uk/efo/EFO_0001833
CHEBI:35219
plant growth retardant
James Malone
AN3CA
James Malone
Ele Holloway
Made obsolete: considered as synonym to invasive lobular carcinoma
true
obsolete_infiltrating lobular carcinoma
mouse cell line
ovalbumin
James Malone
floor of mouth
Floor of the Mouth[accessedResource: NCIt:C54187][accessDate: 10-05-2010]
NCIt:C54187
Floor of the Mouth
The area of the mouth under the ventral surface of the tongue.
The area of the mouth under the ventral surface of the tongue.[accessedResource: NCIt:C54187][accessDate: 10-05-2010]
DOID:4468
[M]Clear cell adenocarcinoma NOS
GeneRIF:15102668
SNOMEDCT:189633003
GeneRIF:15884099
clear cell adenocarcinoma
GeneRIF:12937142
Mesonephroid Clear Cell Carcinoma
clear cell carcinoma
An adenocarcinoma characterized by the presence of varying combinations of clear and hobnail-shaped tumor cells. There are three predominant patterns described as tubulocystic, solid, and papillary. These tumors, usually located in the female reproductive organs, have been seen more frequently in young women since 1970 as a result of the association with intrauterine exposure to diethylstilbestrol. (From Holland et al., Cancer Medicine, 3d ed)
Mesonephroid clear cell adenocarcinoma[accessedResource: SNOMEDCT:30546008][accessDate: 10-05-2010]
[M]Clear cell adenocarcinoma NOS[accessedResource: SNOMEDCT:189633003][accessDate: 10-05-2010]
GeneRIF:14559803
A malignant neoplasm composed of glandular epithelial clear cells. Various architectural patterns may be seen, including papillary, tubulocystic, and solid.
Mesonephroid Clear cell carcinoma[accessedResource: DOID:4468][accessDate: 10-05-2010]
A malignant neoplasm composed of glandular epithelial clear cells. Various architectural patterns may be seen, including papillary, tubulocystic, and solid.[accessedResource: NCIt:C3766][accessDate: 10-05-2010]
MSH:D018262
Clear cell adenocarcinoma NOS (morphologic abnormality)[accessedResource: DOID:4468][accessDate: 10-05-2010]
Clear cell adenocarcinoma, NOS
Adenocarcinomas, Clear Cell[accessedResource: MSH:D018262][accessDate: 10-05-2010]
Clear cell adenocarcinoma, NOS[accessedResource: SNOMEDCT:30546008][accessDate: 10-05-2010]
[M]Clear cell adenocarcinoma NOS (morphologic abnormality)
GeneRIF:15297970
GeneRIF:12086860
James Malone
An adenocarcinoma characterized by the presence of varying combinations of clear and hobnail-shaped tumor cells. There are three predominant patterns described as tubulocystic, solid, and papillary. These tumors, usually located in the female reproductive organs, have been seen more frequently in young women since 1970 as a result of the association with intrauterine exposure to diethylstilbestrol. (From Holland et al., Cancer Medicine, 3d ed)[accessedResource: MSH:D018262][accessDate: 10-05-2010]
Clear cell adenocarcinoma (morphologic abnormality)[accessedResource: DOID:4468][accessDate: 10-05-2010]
GeneRIF:12970394
Clear cell adenocarcinoma NOS (morphologic abnormality)
GeneRIF:14729622
Clear cell adenocarcinoma (morphologic abnormality)
Mesonephroid clear cell adenocarcinoma
GeneRIF:14722919
SNOMEDCT:30546008
NCIt:C3766
Clear cell carcinoma[accessedResource: SNOMEDCT:30546008][accessDate: 10-05-2010]
GeneRIF:15489654
GeneRIF:14633622
Clear Cell Adenocarcinomas
[M]Clear cell adenocarcinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189633003][accessDate: 10-05-2010]
uterine carcinoma
GM12812
James Malone
http://jaxmice.jax.org/strain/009287.html
ILSXISS100/TejJ
Tomasz Adamusiak
4483
James Malone
Ele Holloway
A heterogenous group of inherited muscular dystrophy without the involvement of nervous system. The disease is characterized by MUSCULAR ATROPHY; MUSCLE WEAKNESS; CONTRACTURE of the elbows; ACHILLES TENDON; and posterior cervical muscles; with or without cardiac features. There are several INHERITANCE PATTERNS including X-linked (X CHROMOSOME), autosomal dominant, and autosomal recessive gene mutations.[accessedResource: MSH:D020389][accessDate: 10-05-2010]
GeneRIF:12467752
DOID:11726
Muscular Dystrophy, Scapuloperoneal[accessedResource: MSH:D020389][accessDate: 10-05-2010]
Muscular Dystrophy, Emery-Dreifuss Type
Autosomal Recessive Emery-Dreifuss Muscular Dystrophy[accessedResource: MSH:D020389][accessDate: 10-05-2010]
EMD - Emery-Dreifuss muscular dystrophy[accessedResource: SNOMEDCT:111508004][accessDate: 10-05-2010]
Hauptmann Thannhauser Muscular Dystrophy[accessedResource: MSH:D020389][accessDate: 10-05-2010]
Benign scapuloperoneal muscular dystrophy with early contractures
Emery Dreifuss Syndrome[accessedResource: MSH:D020389][accessDate: 10-05-2010]
X Linked Emery Dreifuss Muscular Dystrophy[accessedResource: MSH:D020389][accessDate: 10-05-2010]
Scapuloperoneal Syndrome, X Linked
Emery-Dreifuss Muscular Dystrophy, Autosomal Recessive
Scapuloperoneal muscular dystrophy (disorder)[accessedResource: SNOMEDCT:129620000][accessDate: 10-05-2010]
Hauptmann-Thannhauser Muscular Dystrophy
A heterogenous group of inherited muscular dystrophy without the involvement of nervous system. The disease is characterized by MUSCULAR ATROPHY; MUSCLE WEAKNESS; CONTRACTURE of the elbows; ACHILLES TENDON; and posterior cervical muscles; with or without cardiac features. There are several INHERITANCE PATTERNS including X-linked (X CHROMOSOME), autosomal dominant, and autosomal recessive gene mutations.
Scapuloperoneal muscular dystrophy (disorder)
SNOMEDCT:129620000
GeneRIF:12755701
Emery-Dreifuss muscular dystrophy
James Malone
Scapuloilioperoneal Atrophy with Cardiopathy[accessedResource: MSH:D020389][accessDate: 10-05-2010]
SNOMEDCT:111508004
Scapuloperoneal Syndrome, X Linked[accessedResource: MSH:D020389][accessDate: 10-05-2010]
Muscular Dystrophy, Emery-Dreifuss, Autosomal Dominant
Muscular Dystrophy, Emery-Dreifuss, X-Linked
Benign scapuloperoneal muscular dystrophy with early contractures[accessedResource: SNOMEDCT:111508004][accessDate: 10-05-2010]
EMD - Emery-Dreifuss muscular dystrophy
GeneRIF:12684533
Emery-Dreifuss muscular dystrophy (disorder)[accessedResource: SNOMEDCT:111508004][accessDate: 10-05-2010]
Emery Dreifuss Muscular Dystrophy 2[accessedResource: MSH:D020389][accessDate: 10-05-2010]
Emery-Dreifuss Muscular Dystrophy 2
Scapuloilioperoneal Atrophy with Cardiopathy
Muscular Dystrophy, Emery-Dreifuss Type[accessedResource: MSH:D020389][accessDate: 10-05-2010]
MSH:D020389
Autosomal Dominant Emery Dreifuss Muscular Dystrophy[accessedResource: MSH:D020389][accessDate: 10-05-2010]
GeneRIF:15009215
GeneRIF:11973618
Emery-Dreifuss muscular dystrophy (disorder)
Muscular Dystrophy, Scapuloperoneal
Emery Dreifuss Syndrome
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Adenocarcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephroid Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:15062033
Kidney Clear Cell Carcinoma
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinoma, Renal Cell
Conventional (Clear Cell) Renal Cell Adenocarcinoma
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.[accessedResource: DOID:4467][accessDate: 10-05-2010]
1.8
Papillary Renal Cell Carcinoma
Clear Cell Renal Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Cell Carcinomas
Clear Cell Carcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Carcinoma, Collecting Duct (Kidney)
Hypernephromas
Sarcomatoid Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
clear cell carcinoma of kidney
Conventional (Clear Cell) Renal Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Clear cell carcinoma of kidney is a renal cell carcinoma described as the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
obsolete_renal clear cell carcinoma
Carcinoma, Nephroid
James Malone
Grawitz Tumor[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.
Carcinoma, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
conventional (Clear cell) renal cell carcinoma[accessedResource: DOID:4467][accessDate: 10-05-2010]
Hypernephroma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Hypernephroid Carcinomas
GeneRIF:14550470
Duct Carcinoma, Collecting (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:15709172
Clear Cell Adenocarcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Clear Cell Adenocarcinoma of the Kidney
conventional renal cell carcinoma
NCIt:C4033
Hypernephroid Carcinoma
true
conventional (Clear cell) renal cell carcinoma
Grawitz tumour[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Carcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Tumor, Grawitz
Chromophobe Renal Cell Carcinoma
Clear Cell Carcinoma of the Kidney
Hypernephroid Carcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephroma
Carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Nephroid Carcinomas
Clear cell carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Renal Cell Adenocarcinomas
Kidney Clear Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
DOID:4467
SNOMEDCT:254915003
Sarcomatoid Renal Cell Carcinoma
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
Renal Cell Adenocarcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Clear Cell Carcinoma
Clear Cell Renal Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Clear Cell Adenocarcinoma of Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Carcinomas, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Clear cell carcinoma of kidney (disorder)[accessedResource: DOID:4467][accessDate: 10-05-2010]
Kidney Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
GeneRIF:12576453
Collecting Duct Carcinomas (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Adenocarcinoma, Renal Cell
Renal Clear Cell Adenocarcinoma
Carcinomas, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Clear cell carcinoma of kidney (disorder)
Clear Cell Adenocarcinoma, Kidney
Conventional Renal Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.
Hypernephromas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Papillary Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Clear Cell Renal Cell Carcinoma
Chromophobe Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinomas, Collecting Duct (Kidney)
Adenocarcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
duplicate of EFO_0000349 (clear cell renal carcinoma)
Grawitz tumour
Adenocarcinoma of kidney
Clear Cell Adenocarcinoma of Kidney
MSH:D002292
Carcinoma of kidney
hemopoietic cell
CL:0000988
blood cell[accessedResource: BTO:0000574][accessDate: 10-05-2010]
Tomasz Adamusiak
haemopoietic cell
haematopoietic cell[accessedResource: CL:0000988][accessDate: 10-05-2010]
A blood cell.
A cell of a hematopoietic lineage.[accessedResource: CL:0000988][accessDate: 10-05-2010]
hemopoietic cell[accessedResource: BTO:0000574][accessDate: 10-05-2010]
hematopoietic cell
BTO:0000574
blood cell
haematopoietic cell
haemopoietic cell[accessedResource: CL:0000988][accessDate: 10-05-2010]
A cell of a hematopoietic lineage.
A blood cell.[accessedResource: BTO:0000574][accessDate: 10-05-2010]
WHIPPLES DIS[accessedResource: MSH:D008061][accessDate: 10-05-2010]
James Malone
Intestinal Lipodystrophy[accessedResource: MSH:D008061][accessDate: 10-05-2010]
Whipple Disease
Whipple's disease
WHIPPLE DIS
WD - Whipple's disease[accessedResource: SNOMEDCT:41545003][accessDate: 10-05-2010]
WHIPPLES DIS
WD - Whipple's disease
ICD9:040.2
Whipples Disease
A chronic systemic infection by a gram-positive bacterium, Tropheryma whippelii, mainly affecting the SMALL INTESTINE but also the JOINTS; CARDIOVASCULAR SYSTEM; and the CENTRAL NERVOUS SYSTEM. The disease is characterized by fat deposits in the INTESTINAL MUCOSA and LYMPH NODES, malabsorption, DIARRHEA with fatty stools, MALNUTRITION, and ARTHRITIS.[accessedResource: MSH:D008061][accessDate: 10-05-2010]
Whipples Disease[accessedResource: MSH:D008061][accessDate: 10-05-2010]
Whipple Disease[accessedResource: MSH:D008061][accessDate: 10-05-2010]
DOID:8476
Intestinal lipodystrophy
Whipple's disease (disorder)[accessedResource: SNOMEDCT:41545003][accessDate: 10-05-2010]
A chronic systemic infection by a gram-positive bacterium, Tropheryma whippelii, mainly affecting the SMALL INTESTINE but also the JOINTS; CARDIOVASCULAR SYSTEM; and the CENTRAL NERVOUS SYSTEM. The disease is characterized by fat deposits in the INTESTINAL MUCOSA and LYMPH NODES, malabsorption, DIARRHEA with fatty stools, MALNUTRITION, and ARTHRITIS.
MSH:D008061
SNOMEDCT:41545003
Intestinal Whipple's disease
Intestinal Whipple's disease[accessedResource: SNOMEDCT:41545003][accessDate: 10-05-2010]
Whipple's disease (disorder)
WHIPPLE DIS[accessedResource: MSH:D008061][accessDate: 10-05-2010]
MAT:0000020
animal fluid
James Malone
NIFSTD:sao658938043
cardiac muscle cell
cardiomyocyte[accessedResource: CL:0000746][accessDate: 10-05-2010]
cardiocyte
A heart muscle cell.
Striated muscle cells found in the heart. They are derived from cardiac myoblasts (myoblasts, cardiac (MSH).
cardiocyte[accessedResource: BTO:0001539][accessDate: 10-05-2010]
Tomasz Adamusiak
A heart muscle cell.[accessedResource: BTO:0001539][accessDate: 10-05-2010]
cardiomyocyte
CL:0000746
Striated muscle cells found in the heart. They are derived from cardiac myoblasts (myoblasts, cardiac (MSH).[accessedResource: NIFSTD:sao658938043][accessDate: 10-05-2010]
James Malone
Cardiac Muscle Cell[accessedResource: NIFSTD:sao658938043][accessDate: 10-05-2010]
BTO:0001539
cardiac myocyte
Fc1c[nH]c(=O)[nH]c1=O
5-fluorouracil
http://www.ebi.ac.uk/efo/EFO_0001474
InChIKey=GHASVSINZRGABV-ZDKSUBDRCT
C4H3FN2O2
Ele Holloway
5-FU
5-fluoropyrimidine-2,4(1H,3H)-dione
CHEBI:46345
An organofluorine compound that has formula C4H3FN2O2.
James Malone
Fluorouracil
5-Fluoropyrimidine-2,4-dione
http://www.ebi.ac.uk/efo/EFO_0002488
InChI=1/C4H3FN2O2/c5-2-1-6-4(9)7-3(2)8/h1H,(H2,6,7,8,9)/f/h6-7H
An assay with input RNA
RNA assay
James Malone
NCI Metathesaurus: C0038404
Enterococcus faecalis infection
James Malone
ZFS:0000004
cleavage 8-cell
James Malone
ZFA:0000311
Is a mandibular muscle that consists of three subdivisions A1, A2, and A3. All three originate on the hyomandibula and suspensorium but each has a distinct insertion. A1 inserts on the maxilla, A2 inserts along the caudal margin of the articular and A3 inserts on the medial surface of the articular.
Is a mandibular muscle that consists of three subdivisions A1, A2, and A3. All three originate on the hyomandibula and suspensorium but each has a distinct insertion. A1 inserts on the maxilla, A2 inserts along the caudal margin of the articular and A3 inserts on the medial surface of the articular.[accessedResource: ZFA:0000311][accessDate: 10-05-2010]
adductor mandibulae complex
James Malone
1.8
true
obsolete_T-cell lymphoblastic lymphoma
James Malone
duplicate of T-cell lymphoblastic lymphoma EFO_0000209
http://www.arabidopsis.org/servlets/TairObject?id=1005158655&type=germplasm
CS57631 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158655&type=germplasm
CS57631
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158814&type=germplasm
CS57790 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158814&type=germplasm
CS57790
James Malone
ITM-E6E7
James Malone
Ele Holloway
true
An independent continuant [snap:IndependentContinuant] consisting of a characteristic spatial shape in relation to some arrangement of other continuant [snap:Continuant] entities and of the medium which is enclosed in whole or in part by this characteristic spatial shape. Site [snap:Site] entities are entities that can be occupied by other continuant [snap:Continuant] entities.
http://www.ebi.ac.uk/efo/EFO_0001437
A site is an entity which consists of a characteristic spatial shape in relation to some arrangement of other material entities.
site
James Malone
Preadipocyte cell line.
F442A
Preadipocyte cell line.[accessedResource: BTO:0001169][accessDate: 10-05-2010]
BTO:0001169
3T3-F442A
James Malone
Ele Holloway
CL:0000449
A cell from the thermogenic form of adipose tissue found in newborns of many species, including humans, and in hibernating mammals. Brown fat is capable of rapid liberation of energy and seems to be important in the maintenance of body temperature immediately after birth and upon waking from hibernation.
A cell from the thermogenic form of adipose tissue found in newborns of many species, including humans, and in hibernating mammals. Brown fat is capable of rapid liberation of energy and seems to be important in the maintenance of body temperature immediately after birth and upon waking from hibernation.[accessedResource: CL:0000449][accessDate: 10-05-2010]
brown fat cell
James Malone
mating type h minus
h -
A S. pombe mating type determined by the mat1-Mc and mat1-Mi on the mat1 locus.
A S. pombe mating type determined by the mat1-Mc and mat1-Mi on the mat1 locus.[accessedResource: PATO:0001345][accessDate: 10-05-2010]
h minus
M[accessedResource: PATO:0001345][accessDate: 10-05-2010]
James Malone
h minus[accessedResource: PATO:0001345][accessDate: 10-05-2010]
M
PATO:0001345
MO_407
h -[accessedResource: PATO:0001345][accessDate: 10-05-2010]
true
umol/kg
micromole per kilogram
James Malone
NCIH1793
James Malone
Ele Holloway
ZFA:0000208
FMAID:7202
EHDAA:8062
gall bladder
MFO:0003020
Organ with organ cavity which is continuous proximally with the cystic duct and distally terminates in the fundus of the gallbladder. Examples: There is only one gallbladder.[accessedResource: FMAID:7202][accessDate: 10-05-2010]
TAO:0000208
Organ with organ cavity which is continuous proximally with the cystic duct and distally terminates in the fundus of the gallbladder. Examples: There is only one gallbladder.
SAEL:44
MAT:0000072
MA:000356
Gallbladder
BTO:0000493
EV:0100090
A small, pear-shaped muscular sac, located under the right lobe of the liver, in which bile secreted by the liver is stored until needed by the body for digestion.[accessedResource: BTO:0000493][accessDate: 10-05-2010]
Gallbladder[accessedResource: FMAID:7202][accessDate: 10-05-2010]
James Malone
A small, pear-shaped muscular sac, located under the right lobe of the liver, in which bile secreted by the liver is stored until needed by the body for digestion.
EMAPA:17202
XAO:0000135
http://jaxmice.jax.org/strain/009263.html
ILSXISS19/TejJ
Tomasz Adamusiak
MAT:0000151
MA:0000688
limb skeleton
limb skeleton[accessedResource: MAT:0000151][accessDate: 10-05-2010]
limb bone
James Malone
antihistaminics
histamine receptor blocker
antihistamine
antihistaminico
http://www.ebi.ac.uk/efo/EFO_0001865
James Malone
CHEBI:37956
histamine antagonist
antihistamines
histamine receptor blockers
Histamine antagonists are the drugs that bind to but do not activate histamine receptors, thereby blocking the actions of histamine or histamine agonists.
Lobular organ the parenchyma of which consists of glandular acini which communicate via a duct system with the duodenum. Examples: There is only one pancreas.
EMAPA:18816
MA:0001582
pancreas
EHDAA:6893
BTO:0000988
SAEL:80
MA:0002415
EV:0100092
James Malone
TAO:0000140
MAT:0000075
A large lobulated gland of vertebrates that secretes digestive enzymes and the hormones insulin and glucagon.[accessedResource: BTO:0000988][accessDate: 10-05-2010]
A large lobulated gland of vertebrates that secretes digestive enzymes and the hormones insulin and glucagon.
ZFA:0000140
XAO:0000136
Lobular organ the parenchyma of which consists of glandular acini which communicate via a duct system with the duodenum. Examples: There is only one pancreas.[accessedResource: FMAID:7198][accessDate: 10-05-2010]
FMAID:7198
Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form.[accessedResource: ZFA:0000279][accessDate: 10-05-2010]
ZFA:0000279
XAO:0000057
presomitic mesoderm
PSM
James Malone
PSM[accessedResource: TAO:0000279][accessDate: 10-05-2010]
Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.[accessedResource: TAO:0000279][accessDate: 10-05-2010]
Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form.
TAO:0000279
Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.
segmental plate
segmental plate[accessedResource: ZFA:0000279][accessDate: 10-05-2010]
Redundant
true
A clincal factors is a biomaterial factor that concerns the observation, treatment or measurement of disease within subjects.
obsolete_clinical factor
James Malone
stomach endoderm
Tomasz Adamusiak
Jie Zheng
4T1
James Malone
Ele Holloway
GM11839
James Malone
CHEBI:35666
thiopurine
sulfanylpurines
mercaptopurines
http://www.ebi.ac.uk/efo/EFO_0001624
http://www.ebi.ac.uk/efo/EFO_0001568
thiopurines
hardware
true
instrument
An instrument is a device which provides a mechanical or electronic function.
OBI_0400003
James Malone
Jie Zheng
Tomasz Adamusiak
MO_134
MO_113
http://www.arabidopsis.org/servlets/TairObject?id=1005158611&type=germplasm
CS57587 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158611&type=germplasm
CS57587
James Malone
A unit of molarity which is equal to 10^[-12] M.
picomolar
pM
James Malone
MO_628
true
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001813
Jie Zheng
EBV Infection
INFECT EPSTEIN BARR VIRUS[accessedResource: MSH:D020031][accessDate: 10-05-2010]
GeneRIF:14747532
GeneRIF:15368517
Human Herpes Virus 4 Infections
Herpesvirus 4 Infections, Human
SNOMEDCT:402121009
Epstein-Barr Virus Infections
HUMAN HERPES VIRUS 4 INFECT
Epstein-Barr Virus Infections[accessedResource: MSH:D020031][accessDate: 10-05-2010]
GeneRIF:15650182
GeneRIF:12163590
HERPESVIRUS 4 INFECT HUMAN
GeneRIF:12050395
Infections, EBV[accessedResource: MSH:D020031][accessDate: 10-05-2010]
GeneRIF:15808506
HERPESVIRUS 4 INFECT HUMAN[accessedResource: MSH:D020031][accessDate: 10-05-2010]
Human Herpes Virus 4 Infections[accessedResource: MSH:D020031][accessDate: 10-05-2010]
Epstein-Barr virus infectious disease[accessedResource: DOID:2938][accessDate: 10-05-2010]
MSH:D020031
Epstein-Barr virus infection (disorder)[accessedResource: SNOMEDCT:402121009][accessDate: 10-05-2010]
HUMAN HERPES VIRUS 4 INFECT[accessedResource: MSH:D020031][accessDate: 10-05-2010]
GeneRIF:11979459
EBV Infection[accessedResource: DOID:2938][accessDate: 10-05-2010]
INFECT EBV
GeneRIF:15929169
INFECT EBV[accessedResource: MSH:D020031][accessDate: 10-05-2010]
Epstein-Barr virus infection
Human Herpesvirus 4 Infections[accessedResource: MSH:D020031][accessDate: 10-05-2010]
GeneRIF:11813981
GeneRIF:15170639
DOID:2938
INFECT EPSTEIN BARR VIRUS
Epstein-Barr virus infectious disease
NCIt:C38759
GeneRIF:15047814
GeneRIF:14747531
GeneRIF:14607922
James Malone
Epstein-Barr virus infection (disorder)
GeneRIF:12707047
Infection with human herpesvirus 4 (HERPESVIRUS 4, HUMAN); which may facilitate the development of various lymphoproliferative disorders. These include BURKITT LYMPHOMA (African type), INFECTIOUS MONONUCLEOSIS, and oral hairy leukoplakia (LEUKOPLAKIA, HAIRY).
GeneRIF:15356108
EBV Infections
Infection with human herpesvirus 4 (HERPESVIRUS 4, HUMAN); which may facilitate the development of various lymphoproliferative disorders. These include BURKITT LYMPHOMA (African type), INFECTIOUS MONONUCLEOSIS, and oral hairy leukoplakia (LEUKOPLAKIA, HAIRY).[accessedResource: MSH:D020031][accessDate: 10-05-2010]
GeneRIF:15324931
non-steroidal anti-inflammatory drugs
non-steroidal anti-inflammatory agent
NSAIDs
NSAID
http://www.ebi.ac.uk/efo/EFO_0001582
An anti-inflammatory drug that is not a steroid. In addition to anti-inflammatory actions, non-steroidal anti-inflammatory drugs have analgesic, antipyretic, and platelet-inhibitory actions. They act by blocking the synthesis of prostaglandins by inhibiting cyclooxygenase, which converts arachidonic acid to cyclic endoperoxides, precursors of prostaglandins.
non-steroidal anti-inflammatory drug
ZFS:0000034
hatching pec-fin
James Malone
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Unit_per_Kilogram
U/kg
unit per kilogram
http://www.arabidopsis.org/servlets/TairObject?id=1005158900&type=germplasm
CS57876 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158900&type=germplasm
CS57876
James Malone
The portion of the colon between the left colic flexure and the sigmoid colon at the pelvic brim; the portion of the descending colon lying in the left iliac fossa is sometimes called the iliac colon.
FMAID:14547
colon descendens[accessedResource: BTO:0000641][accessDate: 10-05-2010]
MAT:0000313
James Malone
BTO:0000641
descending colon
The portion of the colon between the left colic flexure and the sigmoid colon at the pelvic brim; the portion of the descending colon lying in the left iliac fossa is sometimes called the iliac colon.[accessedResource: BTO:0000641][accessDate: 10-05-2010]
colon descendens
http://www.arabidopsis.org/servlets/TairObject?id=1005158800&type=germplasm
CS57776 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158800&type=germplasm
CS57776
James Malone
Autoimmune disease, not elsewhere classified
[X]Disorder involving the immune mechanism, unspecified (disorder)
NCIt:C27351
Immunodeficiency and Immunosuppression Disorders[accessedResource: NCIt:C27351][accessDate: 10-05-2010]
ICD9:279.1
Other specified disorders of the immune mechanism (disorder)[accessedResource: SNOMEDCT:191017001][accessDate: 10-05-2010]
ICD9:279.4
Other specified disorders involving the immune mechanism
A group of non-neoplastic and neoplastic disorders resulting from the deregulation and/or deficiency of immune system functions. It includes autoimmune disorders (e.g., lupus erythematosus, dermatomyositis, rheumatoid arthritis), congenital and acquired immunodeficiency syndromes including the acquired immune deficiency syndrome (AIDS), and neoplasms (e.g., lymphomas and malignancies secondary to transplantation.)[accessedResource: NCIt:C27351][accessDate: 10-05-2010]
ICD9:279.9
AUTOIMMUNE DISEASE NEC[accessedResource: ICD9:279.4][accessDate: 10-05-2010]
ICD9:279.19
Other specified disorders of the immune mechanism (disorder)
DEFIC CELL IMMUNITY NOS
Other deficiency of cell-mediated immunity
Immunodeficiency with predominant T-cell defect, unspecified[accessedResource: ICD9:279.10][accessDate: 10-05-2010]
Disorder of the immune mechanism NOS (disorder)[accessedResource: SNOMEDCT:191019003][accessDate: 10-05-2010]
Immunodeficiency and Immunosuppression Disorders
Other specified disorders of the immune mechanism
IMMUNE MECHANISM DIS NEC[accessedResource: ICD9:279.8][accessDate: 10-05-2010]
SNOMEDCT:191019003
ICD9:279
[X]Disorder involving the immune mechanism, unspecified (disorder)[accessedResource: SNOMEDCT:191035005][accessDate: 10-05-2010]
Unspecified disorder of immune mechanism[accessedResource: ICD9:279.9][accessDate: 10-05-2010]
Immune System and Related Disorders
Other deficiency of cell-mediated immunity[accessedResource: ICD9:279.19][accessDate: 10-05-2010]
AUTOIMMUNE DISEASE NEC
IMMUNDEF T-CELL DEF NOS
IMMUNDEF T-CELL DEF NOS[accessedResource: ICD9:279.10][accessDate: 10-05-2010]
James Malone
Other specified disorders involving the immune mechanism[accessedResource: ICD9:279.8][accessDate: 10-05-2010]
DEFIC CELL IMMUNITY NOS[accessedResource: ICD9:279.19][accessDate: 10-05-2010]
IMMUNE MECHANISM DIS NEC
SNOMEDCT:191035005
Autoimmune disease, not elsewhere classified[accessedResource: ICD9:279.4][accessDate: 10-05-2010]
ICD9:279.10
Disorder of the immune mechanism NOS[accessedResource: SNOMEDCT:191019003][accessDate: 10-05-2010]
ICD9:279.8
Immunodeficiency with predominant T-cell defect, unspecified
Other specified disorders of the immune mechanism[accessedResource: SNOMEDCT:191017001][accessDate: 10-05-2010]
Disorder of the immune mechanism NOS (disorder)
[X]Disorder involving the immune mechanism, unspecified[accessedResource: SNOMEDCT:191035005][accessDate: 10-05-2010]
IMMUNE MECHANISM DIS NOS[accessedResource: ICD9:279.9][accessDate: 10-05-2010]
IMMUNE MECHANISM DIS NOS
immune system disease
SNOMEDCT:191017001
Immune System and Related Disorders[accessedResource: NCIt:C27351][accessDate: 10-05-2010]
DOID:2914
Unspecified disorder of immune mechanism
A group of non-neoplastic and neoplastic disorders resulting from the deregulation and/or deficiency of immune system functions. It includes autoimmune disorders (e.g., lupus erythematosus, dermatomyositis, rheumatoid arthritis), congenital and acquired immunodeficiency syndromes including the acquired immune deficiency syndrome (AIDS), and neoplasms (e.g., lymphomas and malignancies secondary to transplantation.)
[X]Disorder involving the immune mechanism, unspecified
Disorder of the immune mechanism NOS
MAT:0000003
plant component
James Malone
DOID:423
muscular disease
Tomasz Adamusiak
MO_779
A mix of specimens from multiple individuals.
pool
Tomasz Adamusiak
Jie Zheng
James Malone
period of infection
James Malone
PancTu-I
PancTUI
James Malone
Ele Holloway
A protocol description in which a material separation to recover the nucleic acid fraction of an input material is performed
nucleic acid extraction protocol
James Malone
GeneRIF:12881718
[M]Gliomas[accessedResource: SNOMEDCT:189908003][accessDate: 10-05-2010]
GeneRIF:15948146
1.5
GeneRIF:15015772
GeneRIF:12231538
GeneRIF:15973152
[M]Glioma NOS
true
Glioma, NOS (except Nasal glioma, not neoplastic)[accessedResource: SNOMEDCT:74532006][accessDate: 10-05-2010]
GeneRIF:15273738
Tumor of the Neuroglia
GeneRIF:15201971
glial tumors[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
Neuroglial tumor[accessedResource: DOID:2627][accessDate: 10-05-2010]
GeneRIF:15469737
GeneRIF:12810672
GeneRIF:12198774
GeneRIF:12907597
GeneRIF:15088070
GeneRIF:11809417
Glioma, Mixed
GeneRIF:12545160
GeneRIF:15332324
Glial Tumor[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:15774464
Glioma, malignant (morphologic abnormality)
A benign or malignant brain and spinal cord tumor that arises from glial cells (astrocytes, oligodendrocytes, ependymal cells). Tumors that arise from astrocytes are called astrocytic tumors or astrocytomas. Tumors that arise from oligodendrocytes are called oligodendroglial tumors. Tumors that arise from ependymal cells are called ependymomas. -- 2004
SNOMEDCT:189926000
GeneRIF:12850541
GeneRIF:14530312
A benign or malignant brain and spinal cord tumor that arises from glial cells (astrocytes, oligodendrocytes, ependymal cells). Tumors that arise from astrocytes are called astrocytic tumors or astrocytomas. Tumors that arise from oligodendrocytes are called oligodendroglial tumors. Tumors that arise from ependymal cells are called ependymomas.
GeneRIF:16389900
GeneRIF:16033775
GeneRIF:11716067
GeneRIF:12388547
GeneRIF:15160992
Glial Tumor
GeneRIF:16215635
Mixed Gliomas[accessedResource: MSH:D005910][accessDate: 10-05-2010]
GeneRIF:15509526
GeneRIF:15657358
GeneRIF:11949822
Gliomas (morphologic abnormality)
GeneRIF:15958622
GeneRIF:15072448
GeneRIF:12130632
GeneRIF:15056287
GeneRIF:15580296
GeneRIF:11705870
[M]Gliomas (morphologic abnormality)[accessedResource: SNOMEDCT:189908003][accessDate: 10-05-2010]
Glioma, malignant (morphologic abnormality)[accessedResource: SNOMEDCT:74532006][accessDate: 10-05-2010]
Neoplasm of Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
Gliomas, Malignant
GeneRIF:12843260
GeneRIF:11859970
GeneRIF:12684632
GeneRIF:14997014
GeneRIF:11930164
glioma[accessedResource: DOID:2627][accessDate: 10-05-2010]
GeneRIF:12735302
GeneRIF:12962281
GeneRIF:16098466
DOID:2627
GeneRIF:12496285
Gliomas (morphologic abnormality)[accessedResource: DOID:2627][accessDate: 10-05-2010]
GeneRIF:12764090
Glioma (except Nasal glioma, not neoplastic)[accessedResource: SNOMEDCT:74532006][accessDate: 10-05-2010]
GeneRIF:15557754
GeneRIF:14597411
GeneRIF:12576462
Malignant Glioma[accessedResource: MSH:D005910][accessDate: 10-05-2010]
GeneRIF:15737330
GeneRIF:12509854
GeneRIF:15383564
GeneRIF:15254085
MSH:D005910
GeneRIF:16084492
GeneRIF:12125964
Glial Cell Tumors[accessedResource: MSH:D005910][accessDate: 10-05-2010]
GeneRIF:16049340
Gliomas
Glioma (except Nasal glioma, not neoplastic)
GeneRIF:15882793
GeneRIF:11836615
GeneRIF:12821932
GeneRIF:15047712
SNOMEDCT:189908003
GeneRIF:15256062
GeneRIF:15184909
GeneRIF:15816541
[M]Gliomas (morphologic abnormality)
GeneRIF:12133571
A benign or malignant brain and spinal cord tumor that arises from glial cells (astrocytes, oligodendrocytes, ependymal cells). Tumors that arise from astrocytes are called astrocytic tumors or astrocytomas. Tumors that arise from oligodendrocytes are called oligodendroglial tumors. Tumors that arise from ependymal cells are called ependymomas.[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
Glioma, NOS (except Nasal glioma, not neoplastic)
Glial Neoplasm
[M]Glioma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189926000][accessDate: 10-05-2010]
GeneRIF:16264179
Tumor, Glial Cell[accessedResource: MSH:D005910][accessDate: 10-05-2010]
GeneRIF:16304992
Neuroglial Tumor
Tumor of Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:15269346
glioma NOS (morphologic abnormality)[accessedResource: DOID:2627][accessDate: 10-05-2010]
Neoplasm of the Neuroglia
GeneRIF:15126357
SNOMEDCT:115240006
Glial Neoplasm[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:15809742
GeneRIF:15527101
GeneRIF:12738994
GeneRIF:15989758
Malignant glioma
Neoplasm of the Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:11844831
GeneRIF:15812817
GeneRIF:11920587
Neuroglial Neoplasms
Tumors, Glial Cell
Tumors of Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:15469871
GeneRIF:15123617
Neuroglial Neoplasms[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
Benign and malignant central nervous system neoplasms derived from glial cells (i.e., astrocytes, oligodendrocytes, and ependymocytes). Astrocytes may give rise to astrocytomas (ASTROCYTOMA) or glioblastoma multiforme (see GLIOBLASTOMA). Oligodendrocytes give rise to oligodendrogliomas (OLIGODENDROGLIOMA) and ependymocytes may undergo transformation to become EPENDYMOMA; CHOROID PLEXUS NEOPLASMS; or colloid cysts of the third ventricle. (From Escourolle et al., Manual of Basic Neuropathology, 2nd ed, p21)
GeneRIF:15893739
GeneRIF:15198128
GeneRIF:15580288
GeneRIF:14504888
GeneRIF:14719118
GeneRIF:15814461
Neoplasm of Neuroglia
GeneRIF:15218947
GeneRIF:15870690
Gliomas[accessedResource: MSH:D005910][accessDate: 10-05-2010]
GeneRIF:14705150
GeneRIF:15684595
GeneRIF:12629150
GeneRIF:14991747
GeneRIF:13130092
GeneRIF:15015771
GeneRIF:15696967
GeneRIF:15361550
SNOMEDCT:74532006
GeneRIF:12084351
GeneRIF:15547763
GeneRIF:15671555
Neoplasms of Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:12507885
GeneRIF:12518988
GeneRIF:11716069
glial tumors
GeneRIF:12843258
GeneRIF:12963026
GeneRIF:15867349
GeneRIF:14603470
Glioma
GeneRIF:11716065
GeneRIF:12651906
GeneRIF:12507886
[M]Glioma NOS[accessedResource: SNOMEDCT:189926000][accessDate: 10-05-2010]
[M]Glioma NOS (morphologic abnormality)
GeneRIF:11948808
Glioma NOS
James Malone
GeneRIF:12778072
GeneRIF:12932816
Tumors of Neuroglia
GeneRIF:16033774
GeneRIF:14633698
Neoplasms of Neuroglia
GeneRIF:9109541
GeneRIF:12957651
GeneRIF:12651623
Tumor of Neuroglia
Neuroglial Neoplasm[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:15161654
GeneRIF:12698196
GeneRIF:15138575
Glioma, Mixed[accessedResource: MSH:D005910][accessDate: 10-05-2010]
GeneRIF:12783249
GeneRIF:15201989
[M]Gliomas
GeneRIF:15589840
GeneRIF:15592495
GeneRIF:15696973
glioma NOS[accessedResource: DOID:2627][accessDate: 10-05-2010]
GeneRIF:11856869
GeneRIF:12856717
Gliomas, Mixed
Glial Cell Tumor
GeneRIF:12118245
GeneRIF:14676120
GeneRIF:15193433
GeneRIF:15788675
Glioma (morphologic abnormality)[accessedResource: SNOMEDCT:115240006][accessDate: 10-05-2010]
GeneRIF:16027728
Glioma NOS (morphologic abnormality)
GeneRIF:13130506
GeneRIF:15094455
Tumor of the Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:15743799
glioma (morphologic abnormality)
GeneRIF:12600989
GeneRIF:15791479
Replaced with central nervous system cancer (EFO_0000326)
obsolete_glioma
GeneRIF:12609716
GeneRIF:12061725
GeneRIF:15041728
GeneRIF:16092940
GeneRIF:14558597
GeneRIF:11913980
GeneRIF:15915502
GeneRIF:12799382
NCIt:C3059
GeneRIF:15867356
Neuroglial Neoplasm
GeneRIF:15334059
GeneRIF:12883693
GeneRIF:15531913
Gliomas, Malignant[accessedResource: MSH:D005910][accessDate: 10-05-2010]
Glioma, malignant, no ICD-O subtype
GeneRIF:12730958
GeneRIF:15178645
GeneRIF:12388552
GeneRIF:15451022
GeneRIF:15469933
Glioma, malignant, no ICD-O subtype[accessedResource: SNOMEDCT:74532006][accessDate: 10-05-2010]
Benign and malignant central nervous system neoplasms derived from glial cells (i.e., astrocytes, oligodendrocytes, and ependymocytes). Astrocytes may give rise to astrocytomas (ASTROCYTOMA) or glioblastoma multiforme (see GLIOBLASTOMA). Oligodendrocytes give rise to oligodendrogliomas (OLIGODENDROGLIOMA) and ependymocytes may undergo transformation to become EPENDYMOMA; CHOROID PLEXUS NEOPLASMS; or colloid cysts of the third ventricle. (From Escourolle et al., Manual of Basic Neuropathology, 2nd ed, p21)[accessedResource: MSH:D005910][accessDate: 10-05-2010]
SUDHL5
James Malone
Ele Holloway
MO_763
hardware manufacturer
Tomasz Adamusiak
MO_939
translational bias design
Tomasz Adamusiak
An organ of corti derived cell line
UBOC-1
UBOC1
James Malone
Beas2B
BEAS-2B
James Malone
Tomasz Adamusiak
A mole is a substance unit which is equal to the amount of substance of a molecular system which contains as many elementary entities as there are atoms in 0.012 kilogram of carbon 12.
mole
Jie Zheng
mol
true
http://www.ebi.ac.uk/efo/EFO_0001690
James Malone
MO_998
A substance unit which is equal to the amount of substance of a molecular system which contains as many elementary entities as there are atoms in 0.012 kilogram of carbon 12.
http://jaxmice.jax.org/strain/009293.html
ILSXISS115/TejJ
Tomasz Adamusiak
GeneRIF:14562119
GeneRIF:15607368
acute myeloid leukemia without mention of remission[accessedResource: DOID:9119][accessDate: 10-05-2010]
GeneRIF:15674343
ANLL in Remission[accessedResource: DOID:9119][accessDate: 10-05-2010]
GeneRIF:15749074
GeneRIF:15203865
GeneRIF:12760263
AML - acute Myeloid Leukemia
GeneRIF:11986950
GeneRIF:12112533
GeneRIF:15659725
acute non-lymphocytic leukaemia
GeneRIF:12969963
GeneRIF:15621793
acute myeloblastic leukemia (disorder)[accessedResource: DOID:9119][accessDate: 10-05-2010]
GeneRIF:12096348
GeneRIF:16107886
Leukemia, Myelocytic, acute[accessedResource: DOID:9119][accessDate: 10-05-2010]
GeneRIF:14737076
GeneRIF:15208643
GeneRIF:12481903
GeneRIF:12699896
GeneRIF:12393447
GeneRIF:12921955
GeneRIF:12427969
acute myeloid leukemia in remission[accessedResource: DOID:9119][accessDate: 10-05-2010]
GeneRIF:15297415
GeneRIF:12393285
GeneRIF:11823047
GeneRIF:16105979
GeneRIF:12931227
GeneRIF:14662338
GeneRIF:15575056
GeneRIF:14615365
GeneRIF:11986944
GeneRIF:15385933
GeneRIF:11964319
GeneRIF:12209593
GeneRIF:12163055
GeneRIF:12496475
acute myeloid leukaemia - category
GeneRIF:12091906
GeneRIF:16094422
GeneRIF:15840695
acute myeloid leukemia in remission (disorder)[accessedResource: DOID:9119][accessDate: 10-05-2010]
GeneRIF:15855281
GeneRIF:15978940
GeneRIF:12554803
GeneRIF:11782354
GeneRIF:12935959
GeneRIF:14977832
GeneRIF:15735013
GeneRIF:12351377
GeneRIF:12529664
GeneRIF:15985538
GeneRIF:12031912
GeneRIF:15103390
acute myeloid leukaemia
GeneRIF:12661007
GeneRIF:15085153
GeneRIF:12411058
GeneRIF:12557231
GeneRIF:15718420
GeneRIF:15674355
GeneRIF:12200377
GeneRIF:11921279
GeneRIF:15604885
acute myeloid leukaemia, disease
GeneRIF:12239147
GeneRIF:12393438
GeneRIF:14654525
GeneRIF:12127405
GeneRIF:15388581
GeneRIF:15282682
GeneRIF:15304385
GeneRIF:12239146
GeneRIF:14737077
GeneRIF:15451031
GeneRIF:15569991
GeneRIF:15522959
GeneRIF:12351411
GeneRIF:12145704
GeneRIF:15334552
GeneRIF:11999574
GeneRIF:14689061
GeneRIF:12171774
AML
GeneRIF:16239914
GeneRIF:12130514
GeneRIF:12676584
GeneRIF:15289327
GeneRIF:15921740
GeneRIF:12161354
AML - acute Myeloid Leukemia[accessedResource: DOID:9119][accessDate: 10-05-2010]
GeneRIF:12855590
GeneRIF:15725483
GeneRIF:16115907
GeneRIF:12433286
acute myeloid leukaemia[accessedResource: DOID:9119][accessDate: 10-05-2010]
GeneRIF:12393383
GeneRIF:12187073
GeneRIF:12171773
GeneRIF:12417632
GeneRIF:12738986
GeneRIF:12145683
GeneRIF:15607361
GeneRIF:12926083
GeneRIF:15983063
GeneRIF:12691136
GeneRIF:14959847
GeneRIF:12008077
GeneRIF:11920209
GeneRIF:12461747
GeneRIF:15489901
GeneRIF:12970781
GeneRIF:15849776
GeneRIF:12393450
GeneRIF:14726504
GeneRIF:11847008
GeneRIF:15959531
GeneRIF:14966562
GeneRIF:15061191
GeneRIF:15988004
GeneRIF:11986947
MSH:D015470
GeneRIF:12543865
GeneRIF:12660026
GeneRIF:12696071
GeneRIF:11986951
GeneRIF:15146183
GeneRIF:15203866
GeneRIF:14580777
GeneRIF:14749703
GeneRIF:15902282
GeneRIF:12970762
GeneRIF:15618958
GeneRIF:12036858
GeneRIF:16138343
James Malone
GeneRIF:12665971
GeneRIF:11714811
GeneRIF:11830489
acute myeloid leukaemia - category[accessedResource: DOID:9119][accessDate: 10-05-2010]
GeneRIF:15325104
GeneRIF:12717436
GeneRIF:14628086
acute myeloid leukaemia, disease[accessedResource: DOID:9119][accessDate: 10-05-2010]
GeneRIF:15039279
GeneRIF:15234575
GeneRIF:12560229
GeneRIF:15772702
ICD9:205.0
GeneRIF:14615378
GeneRIF:12082641
GeneRIF:15054042
GeneRIF:14654079
DOID:9119
GeneRIF:12008078
GeneRIF:12389613
GeneRIF:14654075
GeneRIF:12799277
GeneRIF:15604894
GeneRIF:12031914
GeneRIF:14506644
GeneRIF:12854887
acute non-lymphocytic leukaemia[accessedResource: DOID:9119][accessDate: 10-05-2010]
GeneRIF:12618766
GeneRIF:12408767
ANLL in Remission
acute myeloblastic leukemia (disorder)
GeneRIF:12369998
GeneRIF:15309527
Leukemia, Myelocytic, acute
GeneRIF:14674243
GeneRIF:12637330
GeneRIF:12453880
GeneRIF:12152989
GeneRIF:14630076
acute myeloid leukemia in remission
GeneRIF:12060632
GeneRIF:15849769
GeneRIF:16012335
GeneRIF:15735743
GeneRIF:14623259
acute myeloid leukemia
AML[accessedResource: DOID:9119][accessDate: 10-05-2010]
GeneRIF:14966519
GeneRIF:11809673
GeneRIF:12604403
GeneRIF:14738146
GeneRIF:14762685
GeneRIF:12186696
acute myelogenous leukemia
GeneRIF:15313458
GeneRIF:11755471
GeneRIF:15128421
GeneRIF:12208746
GeneRIF:15831697
GeneRIF:14576828
GeneRIF:12070009
GeneRIF:15717688
GeneRIF:11911810
acute myeloid leukemia without mention of remission
acute myeloid leukemia in remission (disorder)
GeneRIF:16136505
µm
true
Jie Zheng
um
http://www.ebi.ac.uk/efo/EFO_0001724
micrometre
MO_421
A length unit which is equal to one millionth of a meter or 10^[-6] m.
Tomasz Adamusiak
A micrometer is a length unit which is equal to 1m x 10^-6.
James Malone
micrometer
tadpole stage[accessedResource: MAT:0000400][accessDate: 10-05-2010]
larval stage
tadpole stage
WBIs:0000023
FBdv:00005336
XAO:1000008
MAT:0000400
James Malone
HeLa-S3
Ele Holloway
Caki1
Caki-1
James Malone
PEL-5 is a human primary effusion lymphoma cell line
PEL-5
James Malone
Ele Holloway
MALT lymphoma
James Malone
embryonic day 14.5
Tomasz Adamusiak
Jie Zheng
The role of a chemical to be an anti-inflammatory drug.
http://www.ebi.ac.uk/efo/EFO_0001815
http://purl.org/obo/owl/CHEBI#CHEBI_51086
A role played by the molecular entity or part thereof within a chemical context.
chemical role
James Malone
U266
James Malone
Familiar breast and Ovarian cancer syndrome[accessedResource: DOID:5683][accessDate: 10-05-2010]
BRCA2[accessedResource: DOID:5683][accessDate: 10-05-2010]
DOID:5683
hereditary breast and ovarian cancer
BRCA1
BRCA2
Ele Holloway
hereditary breast ovarian cancer[accessedResource: DOID:5683][accessDate: 10-05-2010]
Tomasz Adamusiak
hereditary breast ovarian cancer
Familiar breast and Ovarian cancer syndrome
BRCA1[accessedResource: DOID:5683][accessDate: 10-05-2010]
SNOMEDCT:276803003
Adenocarcinoma of oesophagus
NCIt:C4025
A malignant tumor with glandular differentiation arising predominantly from Barrett mucosa in the lower third of the esophagus. Rare examples of esophageal adenocarcinoma deriving from ectopic gastric mucosa in the upper esophagus have also been reported. Grossly, esophageal adenocarcinomas are similar to esophageal squamous cell carcinomas. Microscopically, adenocarcinomas arising in the setting of Barrett esophagus are typically papillary and/or tubular. The prognosis is poor.[accessedResource: NCIt:C4025][accessDate: 10-05-2010]
GeneRIF:15526353
GeneRIF:15720819
A malignant tumor with glandular differentiation arising predominantly from Barrett mucosa in the lower third of the esophagus. Rare examples of esophageal adenocarcinoma deriving from ectopic gastric mucosa in the upper esophagus have also been reported. Grossly, esophageal adenocarcinomas are similar to esophageal squamous cell carcinomas. Microscopically, adenocarcinomas arising in the setting of Barrett esophagus are typically papillary and/or tubular. The prognosis is poor.
Adenocarcinoma of the Esophagus
GeneRIF:12771886
GeneRIF:15688381
Adenocarcinoma of oesophagus[accessedResource: SNOMEDCT:276803003][accessDate: 10-05-2010]
Adenocarcinoma of Esophagus[accessedResource: NCIt:C4025][accessDate: 10-05-2010]
adenocarcinoma of esophagus (disorder)[accessedResource: DOID:4914][accessDate: 10-05-2010]
DOID:4914
GeneRIF:15680394
Oesophageal adenocarcinoma NOS[accessedResource: DOID:4914][accessDate: 10-05-2010]
GeneRIF:15517897
Adenocarcinoma of the Esophagus[accessedResource: NCIt:C4025][accessDate: 10-05-2010]
Esophagus Adenocarcinoma[accessedResource: NCIt:C4025][accessDate: 10-05-2010]
adenocarcinoma of esophagus (disorder)
Oesophageal Adenocarcinoma NOS
GeneRIF:12112555
Esophagus Adenocarcinoma
Adenocarcinoma of esophagus
James Malone
GeneRIF:16040301
esophageal adenocarcinoma
Undifferentiated sarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:128734000][accessDate: 10-05-2010]
DOID:6191
NCIt:C27096
Undifferentiated (Embryonal) sarcoma[accessedResource: DOID:6191][accessDate: 10-05-2010]
SNOMEDCT:128734000
James Malone
Embryonal Sarcoma[accessedResource: NCIt:C27096][accessDate: 10-05-2010]
Undifferentiated (Embryonal) sarcoma
A rare malignant tumor of the liver, the incidence of which is highest in children between 6 and 10 years of age.[accessedResource: NCIt:C27096][accessDate: 10-05-2010]
A rare malignant tumor of the liver, the incidence of which is highest in children between 6 and 10 years of age.
SNOMEDCT:59583009
Undifferentiated sarcoma (morphologic abnormality)
undifferentiated sarcoma
Embryonal sarcoma
Embryonal sarcoma (morphologic abnormality)[accessedResource: DOID:6191][accessDate: 10-05-2010]
Embryonal sarcoma (morphologic abnormality)
NCIH2107
James Malone
Ele Holloway
GM12813
James Malone
BTO:0002322
CD8+
An attribute of a cell e.g. CD8+
cell property
James Malone
MAT:0000242
branchial arch
One of a series of bony or cartilaginous arches that develop in the walls of the mouth cavity and pharynx of a vertebrate embryo, consist typically of a curved segmented bar or rod on each side meeting the contralateral bar or rod at the ventral end, and correspond to the gill arches of fishes and amphibians.
visceral arch
One of a series of bony or cartilaginous arches that develop in the walls of the mouth cavity and pharynx of a vertebrate embryo, consist typically of a curved segmented bar or rod on each side meeting the contralateral bar or rod at the ventral end, and correspond to the gill arches of fishes and amphibians.[accessedResource: BTO:0001785][accessDate: 10-05-2010]
ZFA:0001306
pharyngeal arches
pharyngeal arch
James Malone
branchial arch[accessedResource: BTO:0001785][accessDate: 10-05-2010]
visceral arch[accessedResource: BTO:0001785][accessDate: 10-05-2010]
pharyngeal arches[accessedResource: ZFA:0001306][accessDate: 10-05-2010]
BTO:0001785
http://www.arabidopsis.org/servlets/TairObject?id=1005158860&type=germplasm
CS57836 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158860&type=germplasm
CS57836
James Malone
HCC1954
James Malone
HPAF-II
HPAFII
James Malone
Ele Holloway
floral transition
Nerve sheath tumour[accessedResource: SNOMEDCT:115242003][accessDate: 10-05-2010]
Neurofibroma NOS (morphologic abnormality)[accessedResource: DOID:962][accessDate: 10-05-2010]
Nerve sheath tumor
James Malone
Neurofibroma (morphologic abnormality)[accessedResource: SNOMEDCT:89084002][accessDate: 10-05-2010]
Neurofibroma (disorder)[accessedResource: SNOMEDCT:404029005][accessDate: 10-05-2010]
Neurofibroma, NOS[accessedResource: SNOMEDCT:89084002][accessDate: 10-05-2010]
A moderately firm, benign, encapsulated tumor resulting from proliferation of SCHWANN CELLS and FIBROBLASTS that includes portions of nerve fibers. The tumors usually develop along peripheral or cranial nerves and are a central feature of NEUROFIBROMATOSIS 1, where they may occur intracranially or involve spinal roots. Pathologic features include fusiform enlargement of the involved nerve. Microscopic examination reveals a disorganized and loose cellular pattern with elongated nuclei intermixed with fibrous strands (MeSH).[accessedResource: NIFSTD:birnlex_12604][accessDate: 10-05-2010]
[M]Neurofibroma NOS
Neurofibroma, no ICD-O subtype (morphologic abnormality)
Nerve sheath tumor (morphologic abnormality)
An intraneural or extraneural neoplasm arising from nerve tissues and neural sheaths. It is composed of perineurial-like fibroblasts and Schwann cells. It usually presents as a localized cutaneous lesion and less often as a circumscribed peripheral nerve mass. Patients with neurofibromatosis type 1 present with multiple masses. Neurofibromas which arise from major nerves and plexiform neurofibromas are precursor lesions to malignant peripheral nerve sheath tumors.
NIFSTD:birnlex_12604
[M]Neurofibroma NOS[accessedResource: SNOMEDCT:189947001][accessDate: 10-05-2010]
[M]Neurofibroma NOS (morphologic abnormality)
[M]Neurofibroma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189947001][accessDate: 10-05-2010]
NCIt:C3272
Nerve sheath tumor[accessedResource: SNOMEDCT:115242003][accessDate: 10-05-2010]
Nerve sheath tumour
A moderately firm, benign, encapsulated tumor resulting from proliferation of SCHWANN CELLS and FIBROBLASTS that includes portions of nerve fibers. The tumors usually develop along peripheral or cranial nerves and are a central feature of NEUROFIBROMATOSIS 1, where they may occur intracranially or involve spinal roots. Pathologic features include fusiform enlargement of the involved nerve. Microscopic examination reveals a disorganized and loose cellular pattern with elongated nuclei intermixed with fibrous strands (MeSH).
Neurofibroma, no ICD-O subtype
A moderately firm, benign, encapsulated tumor resulting from proliferation of SCHWANN CELLS and FIBROBLASTS that includes portions of nerve fibers. The tumors usually develop along peripheral or cranial nerves and are a central feature of NEUROFIBROMATOSIS 1, where they may occur intracranially or involve spinal roots. Pathologic features include fusiform enlargement of the involved nerve. Microscopic examination reveals a disorganized and loose cellular pattern with elongated nuclei intermixed with fibrous strands. (From Adams et al., Principles of Neurology, 6th ed, p1016)
Neurofibroma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:89084002][accessDate: 10-05-2010]
Neurofibromas
SNOMEDCT:404029005
Neurofibroma (morphologic abnormality)
MSH:D009455
Neurofibroma, no ICD-O subtype[accessedResource: SNOMEDCT:89084002][accessDate: 10-05-2010]
Neurofibromas[accessedResource: DOID:962][accessDate: 10-05-2010]
[M]Neurofibromas
SNOMEDCT:189947001
DOID:962
A moderately firm, benign, encapsulated tumor resulting from proliferation of SCHWANN CELLS and FIBROBLASTS that includes portions of nerve fibers. The tumors usually develop along peripheral or cranial nerves and are a central feature of NEUROFIBROMATOSIS 1, where they may occur intracranially or involve spinal roots. Pathologic features include fusiform enlargement of the involved nerve. Microscopic examination reveals a disorganized and loose cellular pattern with elongated nuclei intermixed with fibrous strands. (From Adams et al., Principles of Neurology, 6th ed, p1016)[accessedResource: MSH:D009455][accessDate: 10-05-2010]
neurofibroma
Tomasz Adamusiak
Nerve sheath tumor (morphologic abnormality)[accessedResource: SNOMEDCT:115242003][accessDate: 10-05-2010]
SNOMEDCT:89084002
An intraneural or extraneural neoplasm arising from nerve tissues and neural sheaths. It is composed of perineurial-like fibroblasts and Schwann cells. It usually presents as a localized cutaneous lesion and less often as a circumscribed peripheral nerve mass. Patients with neurofibromatosis type 1 present with multiple masses. Neurofibromas which arise from major nerves and plexiform neurofibromas are precursor lesions to malignant peripheral nerve sheath tumors.[accessedResource: NCIt:C3272][accessDate: 10-05-2010]
Neurofibroma (disorder)
Neurofibroma, NOS
[M]Neurofibromas[accessedResource: SNOMEDCT:115242003][accessDate: 10-05-2010]
GeneRIF:15652750
Neurofibroma NOS (morphologic abnormality)
GeneRIF:14679180
SNOMEDCT:115242003
ES2
James Malone
Ele Holloway
N-Methyl aspartic acid
N-Methylaspartate
InChI=1/C5H9NO4/c1-6-3(5(9)10)2-4(7)8/h3,6H,2H2,1H3,(H,7,8)(H,9,10)/t3-/m1/s1/f/h7,9H
C5H9NO4
http://www.ebi.ac.uk/efo/EFO_0002731
CN[C@H](CC(O)=O)C(O)=O
N-methyl-D-aspartic acid
An aspartic acid derivative having an N-methyl substituent and D-configuration.
CHEBI:31882
Ele Holloway
N-Methyl-D-aspartate
2-Methylamino-succinic acid
InChIKey=HOKKHZGPKSLGJE-VCKMXKKJDP
Tomasz Adamusiak
(R)-2-Methylamino-succinic acid
NMDA
Methyl aspartic acid
MO_881
biosequence provider
Tomasz Adamusiak
GRO:0005352
xylem
MAT:0000363
BTO:0001468
GRO:0005352[accessedResource: BTO:0001468][accessDate: 10-05-2010]
PO:0005352
A complex tissue in the vascular system of higher plants that consists of vessels, tracheids, or both usually together with wood fibers and parenchyma cells, functions chiefly in conduction of water and dissolved minerals but also in support and food storage, and typically constitutes the woody element (as of a plant stem).
James Malone
A complex tissue in the vascular system of higher plants that consists of vessels, tracheids, or both usually together with wood fibers and parenchyma cells, functions chiefly in conduction of water and dissolved minerals but also in support and food storage, and typically constitutes the woody element (as of a plant stem).[accessedResource: BTO:0001468][accessDate: 10-05-2010]
NC37
James Malone
Ele Holloway
James Malone
CORL105
CORL 105
Ele Holloway
CORL-105
protein kinase inhibitors
http://www.ebi.ac.uk/efo/EFO_0001858
CHEBI:37699
An agent that inhibits protein kinases.
protein kinase inhibitor
James Malone
WBbt:0005255
FBbt:00003126
"valve"[accessedResource: TGMA:0000131][accessDate: 10-05-2010]
Oral part of face
EV:0100057
James Malone
The natural opening through which food passes into the body of an animal and which in vertebrates is typically bounded externally by the lips and internally by the pharynx and encloses the tongue, gums, and teeth.[accessedResource: BTO:0001090][accessDate: 10-05-2010]
"Rima oris"[accessedResource: TGMA:0000131][accessDate: 10-05-2010]
mouth structure
"pharyngeal valve"[accessedResource: TGMA:0000131][accessDate: 10-05-2010]
adult mouth
"pharyngeal valve"
"anatomische Mund"[accessedResource: TGMA:0000131][accessDate: 10-05-2010]
Oral part of face[accessedResource: FMAID:49184][accessDate: 10-05-2010]
The anterior opening of the stomodeum located between the cibarium and pharynx; not to be confused with the secondary mouth (anterior opening of the cibarium) or the tertiary mouth (anterior opening of the food meatus).[accessedResource: TGMA:0000131][accessDate: 10-05-2010]
TAO:0000547
EMAPA:16262
XAO:0000126
adult mouth[accessedResource: TGMA:0000131][accessDate: 10-05-2010]
AAO:0000053
TGMA:0000131
The natural opening through which food passes into the body of an animal and which in vertebrates is typically bounded externally by the lips and internally by the pharynx and encloses the tongue, gums, and teeth.
Mouth
oral cavity
"valve"
oral region
MA:0000341
"Rima oris"
"anatomische Mund"
buccal cavity
FMAID:49184
XAO:0003029
ZFA:0000547
TADS:0000040
MAT:0000038
oral cavity[accessedResource: BTO:0001090][accessDate: 10-05-2010]
oral region[accessedResource: MAT:0000038][accessDate: 10-05-2010]
BTO:0001090
The anterior opening of the stomodeum located between the cibarium and pharynx; not to be confused with the secondary mouth (anterior opening of the cibarium) or the tertiary mouth (anterior opening of the food meatus).
buccal cavity[accessedResource: MAT:0000038][accessDate: 10-05-2010]
Mouth[accessedResource: FMAID:49184][accessDate: 10-05-2010]
mature T cell[accessedResource: CL:0000084][accessDate: 10-05-2010]
T cell
pancreatic T effector cell
Th2
immature T cell
A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.
Th1
T lymphocyte
T-lymphocyte[accessedResource: CL:0000084][accessDate: 10-05-2010]
James Malone
A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.[accessedResource: CL:0000084][accessDate: 10-05-2010]
CL:0000084
immature T cell[accessedResource: CL:0000084][accessDate: 10-05-2010]
mature T cell
peripheral nervous system
pns
Parasympathetic part of autonomic division of nervous system
One of the two divisions of the vertebrate autonomic nervous sytem. Parasympathetic nerves emerge cranially as pre-ganglionic fibres from oculomotor, facial, glossopharyngeal and vagus, and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic acetylcholine receptors. The parasympathetic system innervates, for example, salivary glands, thoracic and abdominal viscera, bladder and genitalia.
PNS - parasympathetic
ZFA:0000142
EMAPA:17270
BTO:0001833
pns[accessedResource: ZFA:0000142][accessDate: 10-05-2010]
MAT:0000101
One of the two divisions of the vertebrate autonomic nervous sytem. Parasympathetic nerves emerge cranially as pre-ganglionic fibres from oculomotor, facial, glossopharyngeal and vagus, and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic acetylcholine receptors. The parasympathetic system innervates, for example, salivary glands, thoracic and abdominal viscera, bladder and genitalia.[accessedResource: BTO:0001833][accessDate: 10-05-2010]
Parasympathetic part of autonomic division of nervous system[accessedResource: FMAID:9907][accessDate: 10-05-2010]
FMAID:9907
James Malone
MA:0000223
parasympathetic nervous system
Nervous structures including ganglia outside of the central nervous system.[accessedResource: ZFA:0000142][accessDate: 10-05-2010]
Nervous structures including ganglia outside of the central nervous system.
TAO:0001575
EHDAA:4655
PNS - parasympathetic[accessedResource: MAT:0000101][accessDate: 10-05-2010]
peripheral nervous system[accessedResource: ZFA:0000142][accessDate: 10-05-2010]
birn_anat:birnlex_1204
MA:0000952
hippocampus CA3
Tomasz Adamusiak
Uterus, corpus[accessedResource: NCIt:C12316][accessDate: 10-05-2010]
Corpus[accessedResource: NCIt:C12316][accessDate: 10-05-2010]
Uterus, corpus
The Corpus uteri, or body of uterus, is the part of the uterus above the isthmus, comprising about two thirds of the non-pregnant organ.
corpus uteri
James Malone
Uterine Body[accessedResource: NCIt:C12316][accessDate: 10-05-2010]
Uterine Body
NCIt:C12316
The Corpus uteri, or body of uterus, is the part of the uterus above the isthmus, comprising about two thirds of the non-pregnant organ.[accessedResource: NCIt:C12316][accessDate: 10-05-2010]
corpus
YCC3
James Malone
Ele Holloway
James Malone
EV:0100075
intestinum ileum
The last division of the small intestine extending between the jejunum and large intestine.
The final section of the small intestine.[accessedResource: NCIt:C12387][accessDate: 10-05-2010]
The last division of the small intestine extending between the jejunum and large intestine.[accessedResource: BTO:0000620][accessDate: 10-05-2010]
The final section of the small intestine.
XAO:0000237
BTO:0000620
intestinum ileum[accessedResource: BTO:0000620][accessDate: 10-05-2010]
MAT:0000282
SAEL:53
FMAID:7208
NCIt:C12387
MA:0000339
ileum
truncus encephalicus
BTO:0000146
brain stem
The part of the brain composed of the mesencephalon, pons, and medulla oblongata and connecting the spinal cord with the forebrain and cerebrum.
James Malone
The part of the brain composed of the mesencephalon, pons, and medulla oblongata and connecting the spinal cord with the forebrain and cerebrum.[accessedResource: BTO:0000146][accessDate: 10-05-2010]
Tomasz Adamusiak
truncus encephalicus[accessedResource: BTO:0000146][accessDate: 10-05-2010]
NIFSTD:birnlex_1565
SNU423
James Malone
Ele Holloway
GeneRIF:14576477
Barrett's esophagus
Barrett Epithelium
Barretts Esophagus
Barrett's esophagus with esophagitis (disorder)[accessedResource: DOID:9206][accessDate: 10-05-2010]
GeneRIF:15041721
Barrett's oesophagus[accessedResource: DOID:9206][accessDate: 10-05-2010]
GeneRIF:15810620
Barrett Syndrome
GeneRIF:15167938
Barrett's esophagus (disorder)[accessedResource: DOID:9206][accessDate: 10-05-2010]
James Malone
Barretts Esophagus[accessedResource: MSH:D001471][accessDate: 10-05-2010]
Barrett's esophagus (disorder) [Ambiguous]
Syndrome, Barrett[accessedResource: MSH:D001471][accessDate: 10-05-2010]
Barrett's ulcer of esophagus (disorder)[accessedResource: DOID:9206][accessDate: 10-05-2010]
(ulcerative esophagitis) or (Barrett's esophagus)[accessedResource: DOID:9206][accessDate: 10-05-2010]
DOID:9206
Barretts syndrome
Barrett's esophagus (disorder)
A condition with damage to the lining of the lower ESOPHAGUS resulting from chronic acid reflux (ESOPHAGITIS, REFLUX). Through the process of metaplasia, the squamous cells are replaced by a columnar epithelium with cells resembling those of the INTESTINE or the salmon-pink mucosa of the STOMACH. Barrett's columnar epithelium is a marker for severe reflux and precursor to ADENOCARCINOMA of the esophagus.
CLE[accessedResource: DOID:9206][accessDate: 10-05-2010]
GeneRIF:15824739
Barrett's oesophagus
Barrett Esophagus
GeneRIF:15231484
GeneRIF:15013707
Barrett's ulcer of esophagus (disorder)
A condition with damage to the lining of the lower ESOPHAGUS resulting from chronic acid reflux (ESOPHAGITIS, REFLUX). Through the process of metaplasia, the squamous cells are replaced by a columnar epithelium with cells resembling those of the INTESTINE or the salmon-pink mucosa of the STOMACH. Barrett's columnar epithelium is a marker for severe reflux and precursor to ADENOCARCINOMA of the esophagus.[accessedResource: MSH:D001471][accessDate: 10-05-2010]
Barrett's esophagus (disorder) [Ambiguous][accessedResource: DOID:9206][accessDate: 10-05-2010]
ICD9:530.85
MSH:D001471
GeneRIF:15878911
GeneRIF:11857318
Esophagus, Barrett[accessedResource: MSH:D001471][accessDate: 10-05-2010]
GeneRIF:15716603
CLE
(Ulcerative esophagitis) or (Barrett's esophagus)
GeneRIF:15967118
Barrett's esophagus with esophagitis (disorder)
Barretts syndrome[accessedResource: DOID:9206][accessDate: 10-05-2010]
Epithelium, Barrett[accessedResource: MSH:D001471][accessDate: 10-05-2010]
GeneRIF:16291394
InChI=1/C12H10O2/c13-12(14)8-10-6-3-5-9-4-1-2-7-11(9)10/h1-7H,8H2,(H,13,14)/f/h13H
alpha-naphthaleneacetic acid
NAPHTHALEN-1-YL-ACETIC ACID
NAA
OC(=O)Cc1cccc2ccccc12
InChIKey=PRPINYUDVPFIRX-NDKGDYFDCS
1-naphthaleneacetic acid
naphthalene-1-acetic acid
A naphthylacetic acid that has formula C12H10O2.
1-naphthylacetic acid
C12H10O2
James Malone
Ele Holloway
naphthalen-1-ylacetic acid
CHEBI:32918
alpha-NAA
http://www.ebi.ac.uk/efo/EFO_0002394
N-Ethylnitrosourea
N-Ethyl-N-nitroso carbamide
ENU
CHEBI:23995
InChIKey=FUSGACRLAFQQRL-LGEMBHMGCE
http://www.ebi.ac.uk/efo/EFO_0001533
N-ethyl-N-nitrosourea
C3H7N3O2
NEU
1-(Aminocarbonyl)-1-ethyl-2-oxohydrazine
A urea compound having ethyl and nitroso substituents in the 1-position.
CCN(N=O)C(N)=O
Aethylnitroso-harnstoff
InChI=1/C3H7N3O2/c1-2-6(5-8)3(4)7/h2H2,1H3,(H2,4,7)/f/h4H2
ethyl nitrosourea
1-ethyl-1-nitrosourea
InChI=1/C22H18Cl2FNO3/c1-22(2)15(11-19(23)24)20(22)21(27)29-18(12-26)13-8-9-16(25)17(10-13)28-14-6-4-3-5-7-14/h3-11,15,18,20H,1-2H3
James Malone
CC1(C)C(C=C(Cl)Cl)C1C(=O)OC(C#N)c1ccc(F)c(Oc2ccccc2)c1
InChIKey=QQODLKZGRKWIFG-UHFFFAOYAM
CHEBI:4034
cyano(4-fluoro-3-phenoxyphenyl)methyl 3-(2,2-dichloroethenyl)-2,2-dimethylcyclopropanecarboxylate
(R,S)-alpha-Cyano-4-fluoro-3-phenoxybenzyl-(1R,S)-cis,trans-3-(2,2-dichlorovinyl)-2,2-dimethylcyclopropanecarboxylate
http://www.ebi.ac.uk/efo/EFO_0001515
C22H18Cl2FNO3
cyfluthrin
The malignant human B-cell-line BJAB is a EBV-negative Burkitt-like lymphoma cell line.
Ele Holloway
James Malone
BJAB
BTO:0001931
The malignant human B-cell-line BJAB is a EBV-negative Burkitt-like lymphoma cell line.[accessedResource: BTO:0001931][accessDate: 10-05-2010]
GM12751
James Malone
A temporal mesurement of an occurrence of a metastasis measured from some defined time point.
event distant metastases
James Malone
CNS
Organ with organ cavity which consists of gray matter and white matter. Examples: There is only one neuraxis.
TAO:0000012
BTO:0000227
ZFA:0000012
EV:0100163
EMAPA:16470
Organ with organ cavity which consists of gray matter and white matter. Examples: There is only one neuraxis.[accessedResource: FMAID:55675][accessDate: 10-05-2010]
Neuraxis[accessedResource: FMAID:55675][accessDate: 10-05-2010]
Neuraxis
The central nervous system is that part of the nervous system that consists of the brain and spinal cord. The central nervous system (CNS) is one of the two major divisions of the nervous system. The other is the peripheral nervous system (PNS) which is outside the brain and spinal cord.
Cerebrospinal axis[accessedResource: FMAID:55675][accessDate: 10-05-2010]
EHDAA:828
The brain and spinal cord. Kimmel et al, 1995.
FMAID:55675
James Malone
The brain and spinal cord.[accessedResource: ZFA:0000012][accessDate: 10-05-2010]
The brain and spinal cord.
central nervous system
MA:0000167
NIFSTD:birnlex_1099
MAT:0000457
The brain and spinal cord. Kimmel et al, 1995.[accessedResource: TAO:0000012][accessDate: 10-05-2010]
Cerebrospinal axis
The central nervous system is that part of the nervous system that consists of the brain and spinal cord. The central nervous system (CNS) is one of the two major divisions of the nervous system. The other is the peripheral nervous system (PNS) which is outside the brain and spinal cord.[accessedResource: BTO:0000227][accessDate: 10-05-2010]
CNS[accessedResource: FMAID:55675][accessDate: 10-05-2010]
Tomasz Adamusiak
James Malone
HMEC
GeneRIF:15024701
Leiomyosarcoma, no subtype
Leiomyosarcoma, NOS
Leiomyosarcoma NOS (morphologic abnormality)
SNOMEDCT:51549004
GeneRIF:15051038
Leiomyomosarcoma, no subtype (morphologic abnormality)[accessedResource: DOID:1967][accessDate: 10-05-2010]
Myxoid Leiomyosarcomas
Leiomyosarcoma, Myxoid[accessedResource: MSH:D007890][accessDate: 10-05-2010]
LMS - Leiomyosarcoma[accessedResource: SNOMEDCT:51549004][accessDate: 10-05-2010]
Leiomyosarcomas, Epithelioid[accessedResource: MSH:D007890][accessDate: 10-05-2010]
A malignant smooth muscle cancer that can arise almost anywhere in the body, but is most common in the uterus, abdomen, or pelvis.
[M]Leiomyosarcoma NOS (morphologic abnormality)
[M]Leiomyosarcoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189790006][accessDate: 10-05-2010]
Epithelioid Leiomyosarcoma
A malignant smooth muscle cancer that can arise almost anywhere in the body, but is most common in the uterus, abdomen, or pelvis.[accessedResource: DOID:1967][accessDate: 10-05-2010]
leiomyosarcoma
A sarcoma containing large spindle cells of smooth muscle. Although it rarely occurs in soft tissue, it is common in the viscera. It is the most common soft tissue sarcoma of the gastrointestinal tract and uterus. The median age of patients is 60 years. (From Dorland, 27th ed; Holland et al., Cancer Medicine, 3d ed, p1865)[accessedResource: MSH:D007890][accessDate: 10-05-2010]
GeneRIF:12177782
Leiomyosarcoma, Myxoid
Leiomyomosarcoma, no subtype (morphologic abnormality)
Leiomyosarcoma, no subtype (morphologic abnormality)[accessedResource: SNOMEDCT:51549004][accessDate: 10-05-2010]
NCIt:C3158
[M]Leiomyosarcoma NOS
Leiomyosarcomas[accessedResource: MSH:D007890][accessDate: 10-05-2010]
Leiomyosarcoma, Epithelioid[accessedResource: MSH:D007890][accessDate: 10-05-2010]
[M]Leiomyosarcoma NOS[accessedResource: SNOMEDCT:189790006][accessDate: 10-05-2010]
Leiomyosarcoma, no subtype (morphologic abnormality)
Leiomyosarcoma, no subtype[accessedResource: SNOMEDCT:51549004][accessDate: 10-05-2010]
An uncommon, aggressive malignant smooth muscle neoplasm, usually occurring in post-menopausal women. It is characterized by a proliferation of neoplastic spindle cells. Morphologic variants include epithelioid, granular cell, inflammatory and myxoid leimyosarcomas.[accessedResource: NCIt:C3158][accessDate: 10-05-2010]
Epithelioid Leiomyosarcomas
Leiomyosarcomas
James Malone
An uncommon, aggressive malignant smooth muscle neoplasm, usually occurring in post-menopausal women. It is characterized by a proliferation of neoplastic spindle cells. Morphologic variants include epithelioid, granular cell, inflammatory and myxoid leimyosarcomas.
A sarcoma containing large spindle cells of smooth muscle. Although it rarely occurs in soft tissue, it is common in the viscera. It is the most common soft tissue sarcoma of the gastrointestinal tract and uterus. The median age of patients is 60 years. (From Dorland, 27th ed; Holland et al., Cancer Medicine, 3d ed, p1865)
leiomyosarcoma NOS (morphologic abnormality)[accessedResource: DOID:1967][accessDate: 10-05-2010]
GeneRIF:15051039
MSH:D007890
Leiomyosarcomas, Myxoid[accessedResource: MSH:D007890][accessDate: 10-05-2010]
LMS - Leiomyosarcoma
GeneRIF:11759055
DOID:1967
Leiomyosarcoma, NOS[accessedResource: SNOMEDCT:51549004][accessDate: 10-05-2010]
SNOMEDCT:189790006
gene name
petal
GRO:0005667
MAT:0000354
The often showy flower component attached just inside the sepals; petals are usually colorful to attract pollinators.
James Malone
BTO:0001040
The often showy flower component attached just inside the sepals; petals are usually colorful to attract pollinators.[accessedResource: BTO:0001040][accessDate: 10-05-2010]
GRO:0005667[accessedResource: BTO:0001040][accessDate: 10-05-2010]
PO:0009032
FBbt:00005612
embryonic esophagus
James Malone
CFT-2
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158739&type=germplasm
CS57715 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158739&type=germplasm
CS57715
James Malone
http://www.ebi.ac.uk/efo/EFO_0001718
picoliter
Jie Zheng
true
MO_905
Tomasz Adamusiak
James Malone
pl
A volume unit which is equal to 10^[-12] L.
A picoliter is a volume unit which is equal to 10^-12 L.
Helen Parkinson
renal system disease
nephropathy
A disease affecting the kidneys
kidney disease
TT
James Malone
Ele Holloway
http://en.wikipedia.org/wiki/DNA_microarray#Uses_and_types
Helen Parkinson
An array consisting of DNA probes bound to a substrate
DNA array
TGMA:0000164
The walking appendages of each segment of the ventral adult external thorax.
FBbt:00004640
In animals, one of the paired appendages ordinarily used in locomotion and support. In insects, applied only to the three pairs of thoracic legs; in most insects, composed of the coxa, trochanter, femur, tibia, tarsus and posttarsus.[accessedResource: TGMA:0000164][accessDate: 10-05-2010]
invertebrata limb
MAT:0000095
invertebrate limb
In animals, one of the paired appendages ordinarily used in locomotion and support. In insects, applied only to the three pairs of thoracic legs; in most insects, composed of the coxa, trochanter, femur, tibia, tarsus and posttarsus.
The walking appendages of each segment of the ventral adult external thorax.[accessedResource: FBbt:00004640][accessDate: 10-05-2010]
TADS:0000002
James Malone
Publication published in a journal.
published
Tomasz Adamusiak
A germ layer lying remote from the surface of the embryo that gives rise to internal tissues such as gut.[accessedResource: BTO:0000800][accessDate: 10-05-2010]
endoderm
Jie Zheng
BTO:0000800
hypoblast[accessedResource: BTO:0000800][accessDate: 10-05-2010]
hypoblast
Tomasz Adamusiak
A germ layer lying remote from the surface of the embryo that gives rise to internal tissues such as gut.
FMAID:69071
2,2-Di(4-hydroxyphenyl)propane
http://www.ebi.ac.uk/efo/EFO_0001493
InChIKey=IISBACLAFKSPIT-UHFFFAOYAI
4,4'-Isopropylidenediphenol
bisphenol A
2,2-Bis(4-Hydroxyphenyl)propane
A bisphenol that has formula C15H16O2.
C15H16O2
CHEBI:33216
2,2-Bis(p-hydroxyphenyl)propane
4,4'-(propane-2,2-diyl)diphenol
InChI=1/C15H16O2/c1-15(2,11-3-7-13(16)8-4-11)12-5-9-14(17)10-6-12/h3-10,16-17H,1-2H3
CC(C)(c1ccc(O)cc1)c1ccc(O)cc1
2,2-Di(4-phenylol)propane
4,4'-(1-Methylethylidene)bisphenol
4,4'-Bisphenol A
Ramos
Ramos cell line is an EBV-negative, HLA class 1 positive B-lymphoblastoid cell line derived from a Burkitt lymphoma
James Malone
Ele Holloway
is equivalent to an instance of class organism
true
Identifier or name of the individual organism from which the biomaterial was derived.
obsolete_individual
BTO:0000486
GRO:0005250[accessedResource: BTO:0000486][accessDate: 10-05-2010]
GRO:0005250
fruit
MAT:0000232
The mature ovary or ovaries of a seed-bearing plant, together with accessory parts, containing the seeds and occurring in a wide variety of forms.
PO:0009001
James Malone
silique
The mature ovary or ovaries of a seed-bearing plant, together with accessory parts, containing the seeds and occurring in a wide variety of forms.[accessedResource: BTO:0000486][accessDate: 10-05-2010]
FMAID:3768
Arch of aorta
Arch of aorta[accessedResource: FMAID:3768][accessDate: 10-05-2010]
aortic arch
Tomasz Adamusiak
Jie Zheng
FMAID:7409
bronchus
main bronchus
Bronchial trunk
James Malone
MAT:0000133
EV:0100041
main bronchus[accessedResource: MAT:0000133][accessDate: 10-05-2010]
EMAPA:16849
BTO:0001340
Either of the two primary divisions of the trachea that lead respectively into the right and the left lung.
Bronchial trunk[accessedResource: FMAID:7409][accessDate: 10-05-2010]
MA:0000436
Either of the two primary divisions of the trachea that lead respectively into the right and the left lung.[accessedResource: BTO:0001340][accessDate: 10-05-2010]
EHDAA:3072
XAO:0000121
SAEL:14
James Malone
antiserotonergic agents
http://www.ebi.ac.uk/efo/EFO_0001875
serotonin antagonists
Drugs that bind to but do not activate serotonin receptors, thereby blocking the actions of serotonin or serotonergic agonists.
5-HT antagonists
serotonergic antagonist
5-hydroxytryptamine antagonists
CHEBI:48279
serotonin blockaders
Stratified squamous epithelium that covers the outer surface of the cornea. (MeSH)
anterior endothelium of cornea[accessedResource: BTO:0000287][accessDate: 10-05-2010]
endothelium corneale
corneal endothelium
corneal epithelium
endothelium anterius corneae[accessedResource: BTO:0000287][accessDate: 10-05-2010]
endothelium camerae anterioris bulbi
anterior endothelium of cornea
epithelium posterius corneae
NCIt:C12928
James Malone
Stratified squamous epithelium that covers the outer surface of the cornea. (MeSH)[accessedResource: NCIt:C12928][accessDate: 10-05-2010]
Posterior epithelium of cornea: the mesothelial layer covering the posterior surface of the posterior limiting lamina of the cornea; it was once believed to extend to the anterior surface of the stroma of the iris.[accessedResource: BTO:0000287][accessDate: 10-05-2010]
endothelium corneale[accessedResource: BTO:0000287][accessDate: 10-05-2010]
endothelium anterius corneae
Posterior epithelium of cornea: the mesothelial layer covering the posterior surface of the posterior limiting lamina of the cornea; it was once believed to extend to the anterior surface of the stroma of the iris.
endothelium camerae anterioris bulbi[accessedResource: BTO:0000287][accessDate: 10-05-2010]
epithelium posterius corneae[accessedResource: BTO:0000287][accessDate: 10-05-2010]
BTO:0000287
corneal endothelium[accessedResource: BTO:0000287][accessDate: 10-05-2010]
nasal cavity olfactory epithelium
An epithelium located in the roof, superior conchae, and septum of the nasal cavity. It is formed by ciliated olfactory receptor cells, supporting cells and basal cells. Olfactory glands in the epithelium produce and secrete mucus which forms a layer over the epithelium. The cilia of the receptor cells protrude into the mucous layer where molecular reception with odors occurs and sensory transduction begins.
olfactory mucosa[accessedResource: BTO:0000108][accessDate: 10-05-2010]
NCIt:C33203
BTO:0000108
Olfactory sensory epithelium[accessedResource: FMA:64803][accessDate: 10-05-2010]
James Malone
nasal epithelium[accessedResource: BTO:0000108][accessDate: 10-05-2010]
olfactory epithelium
FMA:64803
An epithelium located in the roof, superior conchae, and septum of the nasal cavity. It is formed by ciliated olfactory receptor cells, supporting cells and basal cells. Olfactory glands in the epithelium produce and secrete mucus which forms a layer over the epithelium. The cilia of the receptor cells protrude into the mucous layer where molecular reception with odors occurs and sensory transduction begins.[accessedResource: NCIt:C33203][accessDate: 10-05-2010]
nasal epithelium
nasal cavity olfactory epithelium[accessedResource: BTO:0000108][accessDate: 10-05-2010]
Olfactory sensory epithelium
olfactory mucosa
Pseudostratified epithelium lining the olfactory region of the nasal cavity, and containing the receptors for the sense of smell.
Pseudostratified epithelium lining the olfactory region of the nasal cavity, and containing the receptors for the sense of smell.[accessedResource: BTO:0000108][accessDate: 10-05-2010]
A red blood cell. In mammals, mature erythrocytes are non-nucleated, biconcave disks containing hemoglobin whose function is to transport oxygen.[accessedResource: CL:0000232][accessDate: 10-05-2010]
Any of the hemoglobin-containing cells that carry oxygen to the tissues and are responsible for the red color of vertebrate blood.
Any of the hemoglobin-containing cells that carry oxygen to the tissues and are responsible for the red color of vertebrate blood.[accessedResource: BTO:0000424][accessDate: 10-05-2010]
BTO:0000424
red blood corpuscle[accessedResource: BTO:0000424][accessDate: 10-05-2010]
red blood corpuscle
erythrocyte
CL:0000232
red blood cell[accessedResource: BTO:0000424][accessDate: 10-05-2010]
RBC[accessedResource: CL:0000232][accessDate: 10-05-2010]
red blood cell
RBC
A red blood cell. In mammals, mature erythrocytes are non-nucleated, biconcave disks containing hemoglobin whose function is to transport oxygen.
James Malone
naphthalene-1,5-diamine
A naphthalenediamine compound having amino substituents in the 1- and 5-positions.
http://www.ebi.ac.uk/efo/EFO_0002492
Nc1cccc2c(N)cccc12
C10H10N2
Ele Holloway
CHEBI:53003
1,5-diaminonaphthalene
1,5-Naphthylenediamine
InChIKey=KQSABULTKYLFEV-UHFFFAOYAR
James Malone
1,5-Naphthalenediamine
InChI=1/C10H10N2/c11-9-5-1-3-7-8(9)4-2-6-10(7)12/h1-6H,11-12H2
https://www.cbil.upenn.edu/RADQuerier/php/sampleInfo.php?assay_id=8647&&study_id=2424
C57Bl/10 derived non-diabetic mouse strain expressing H2g7 and Idd3
B10.NOD_H2g7_Idd3
Tomasz Adamusiak
Jie Zheng
InChIKey=FBOZXECLQNJBKD-SGDZJVHDDX
InChI=1/C20H22N8O5/c1-28(9-11-8-23-17-15(24-11)16(21)26-20(22)27-17)12-4-2-10(3-5-12)18(31)25-13(19(32)33)6-7-14(29)30/h2-5,8,13H,6-7,9H2,1H3,(H,25,31)(H,29,30)(H,32,33)(H4,21,22,23,26,27)/t13-/m0/s1/f/h25,29,32H,21-22H2
http://www.ebi.ac.uk/efo/EFO_0001572
N-[4-[[(2,4-diamino-6-pteridinyl)methyl]methylamino]benzoyl]-L-glutamic acid
Emtexate
Rheumatrex
James Malone
methotrexatum
Ledertrexate
metotrexato
C20H22N8O5
MTX
CN(Cc1cnc2nc(N)nc(N)c2n1)c1ccc(cc1)C(=O)N[C@@H](CCC(O)=O)C(O)=O
Trexall
A pteridine that has formula C20H22N8O5.
CHEBI:44185
4-amino-N(10)-methylpteroylglutamic acid
4-amino-10-methylfolic acid
N-[(4-{[(2,4-diaminopteridin-6-yl)methyl](methyl)amino}phenyl)carbonyl]-L-glutamic acid
methotrexate
N-(4-{[(2,4-diaminopteridin-6-yl)methyl](methyl)amino}benzoyl)-L-glutamic acid
BTO:0001301
MAT:0000360
bark
The tough exterior covering of a woody root or stem; specifically: the tissues outside the cambium that include an inner layer especially of secondary phloem and an outer layer of periderm.
The tough exterior covering of a woody root or stem; specifically: the tissues outside the cambium that include an inner layer especially of secondary phloem and an outer layer of periderm.[accessedResource: BTO:0001301][accessDate: 10-05-2010]
James Malone
PO:0004518
benign tumor
benign neoplasm
Tomasz Adamusiak
James Malone
MO_770
The process of treating a material with radiation
irradiate
Tomasz Adamusiak
Jie Zheng
James Malone
Cirrhosis of liver NOS
NCIt:C2951
Cirrhosis of liver without mention of alcohol[accessedResource: SNOMEDCT:19943007][accessDate: 10-05-2010]
GeneRIF:12829439
GeneRIF:12127815
GeneRIF:16015705
Cirrhoses, Hepatic
GeneRIF:12829997
Liver disease in which the normal microcirculation, the gross vascular anatomy, and the hepatic architecture have been variably destroyed and altered with fibrous septa surrounding regenerated or regenerating parenchymal nodules.
GeneRIF:14961153
MSH:D008103
James Malone
CL - Cirrhosis of liver[accessedResource: SNOMEDCT:19943007][accessDate: 10-05-2010]
GeneRIF:15982324
GeneRIF:15765409
Cirrhosis of liver NOS[accessedResource: DOID:5082][accessDate: 10-05-2010]
GeneRIF:15094940
A disorder characterized by replacement of the liver parenchyma with fibrous tissue and regenerative nodules. It is usually caused by alcoholisms, hepatitis B, and hepatitis C. Complications include the development of ascites, esophageal varices, bleeding, and hepatic encephalopathy.
Hepatic cirrhosis, NOS
Cirrhosis of liver NOS (disorder)
GeneRIF:12532467
GeneRIF:11953887
Liver disease in which the normal microcirculation, the gross vascular anatomy, and the hepatic architecture have been variably destroyed and altered with fibrous septa surrounding regenerated or regenerating parenchymal nodules.[accessedResource: MSH:D008103][accessDate: 10-05-2010]
GeneRIF:15239259
Hepatic cirrhosis[accessedResource: SNOMEDCT:19943007][accessDate: 10-05-2010]
GeneRIF:15808312
Cirrhosis, Hepatic
cirrhosis[accessedResource: DOID:5082][accessDate: 10-05-2010]
SNOMEDCT:235891006
GeneRIF:15104370
GeneRIF:14768003
GeneRIF:16255765
Cirrhosis of liver (disorder)
Cirrhoses, Liver
cirrhosis of liver
GeneRIF:15956070
Liver Cirrhoses[accessedResource: MSH:D008103][accessDate: 10-05-2010]
A disorder characterized by replacement of the liver parenchyma with fibrous tissue and regenerative nodules. It is usually caused by alcoholisms, hepatitis B, and hepatitis C. Complications include the development of ascites, esophageal varices, bleeding, and hepatic encephalopathy.[accessedResource: NCIt:C2951][accessDate: 10-05-2010]
GeneRIF:12945872
Cirrhosis of liver NOS (disorder)[accessedResource: SNOMEDCT:235891006][accessDate: 10-05-2010]
Cirrhoses, Hepatic[accessedResource: MSH:D008103][accessDate: 10-05-2010]
GeneRIF:15742396
GeneRIF:12631357
Hepatic cirrhosis, NOS[accessedResource: SNOMEDCT:19943007][accessDate: 10-05-2010]
GeneRIF:15222038
GeneRIF:15172884
GeneRIF:16098781
GeneRIF:12971960
Liver Cirrhosis
Cirrhosis of liver (disorder)[accessedResource: DOID:5082][accessDate: 10-05-2010]
Liver Cirrhosis[accessedResource: DOID:5082][accessDate: 10-05-2010]
GeneRIF:12757931
GeneRIF:12842454
Cirrhosis of liver without mention of alcohol
SNOMEDCT:19943007
Cirrhosis
GeneRIF:15710227
GeneRIF:15550559
GeneRIF:15737463
CL - Cirrhosis of liver
DOID:5082
GeneRIF:15368451
GeneRIF:14669345
Liver Fibrosis
Liver Fibroses
Liver Fibroses[accessedResource: MSH:D008103][accessDate: 10-05-2010]
GeneRIF:15094224
GeneRIF:15956705
Fibrosis, Liver[accessedResource: MSH:D008103][accessDate: 10-05-2010]
diet
The customary allowance of food and drink taken by a person or an animal from day to day, particularly one especially planned to meet specific requirements of the individual, including or excluding certain items of food; a prescribed course of eating and drinking in which the amount and kind of food, as well as the times at which it is to be taken, are regulated for therapeutic purposes or selected with reference to a particular state of health.
Jie Zheng
Dietary
Dietary[accessedResource: NCIt:C15222][accessDate: 10-05-2010]
NCIt:C15222
The customary allowance of food and drink taken by a person or an animal from day to day, particularly one especially planned to meet specific requirements of the individual, including or excluding certain items of food; a prescribed course of eating and drinking in which the amount and kind of food, as well as the times at which it is to be taken, are regulated for therapeutic purposes or selected with reference to a particular state of health.[accessedResource: NCIt:C15222][accessDate: 10-05-2010]
Tomasz Adamusiak
NCIt:C12346
tear gland
An acinous gland that is about the size and shape of an almond, secretes tears, and is situated laterally and superiorly to the bulb of the eye in a shallow depression on the inner surface of the frontal bone.[accessedResource: BTO:0000044][accessDate: 10-05-2010]
lacrimal gland
Paired, almond-shaped exocrine glands situated superior and posterior to each orbit of the eye that produce and secrete the watery serous component of tears.
James Malone
BTO:0000044
tear gland[accessedResource: BTO:0000044][accessDate: 10-05-2010]
Paired, almond-shaped exocrine glands situated superior and posterior to each orbit of the eye that produce and secrete the watery serous component of tears.[accessedResource: NCIt:C12346][accessDate: 10-05-2010]
An acinous gland that is about the size and shape of an almond, secretes tears, and is situated laterally and superiorly to the bulb of the eye in a shallow depression on the inner surface of the frontal bone.
http://www.arabidopsis.org/servlets/TairObject?id=1005158593&type=germplasm
CS57569 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158593&type=germplasm
CS57569
James Malone
monocyte-derived intermediate cell
MAT:0000478
stomach anlage
An anlage is a tissue modifier describing some tissue which precedes something other, such as a precursor or forerunner for a more mature structure. For example, the stomach anlage.
anlage
James Malone
WI38
James Malone
Glioblastoma H54 is a cell line derived from
H54
glioblastoma H54
An Ara-C-resistant murine leukemia is a cell line.
A b117h, and a b140h are kinds of Ara-C-resistant murine leukemias.
Ara-C-resistant murine leukemia
Natural Language Generator 8th April 2010
James Malone
YCC11
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158846&type=germplasm
CS57822 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158846&type=germplasm
CS57822
James Malone
MCC:0000290
LNCAP
LNCaP cell
Human prostate carcinoma, established from the left supraclavicular lymph node metastasis from a 50-year-old man with prostate carcinoma in 1977; cells were described to be androgen-sensitive.[accessedResource: BTO:0001321][accessDate: 10-05-2010]
LNCAP cell[accessedResource: BTO:0001321][accessDate: 10-05-2010]
Ele Holloway
James Malone
BTO:0001321
Human prostate carcinoma, established from the left supraclavicular lymph node metastasis from a 50-year-old man with prostate carcinoma in 1977; cells were described to be androgen-sensitive.
DOID:7474
malignant pleural mesothelioma
malignant Mesothelioma of the Pleura
GeneRIF:15829320
GeneRIF:14719068
Malignant mesothelioma of pleura (disorder)[accessedResource: SNOMEDCT:254645002][accessDate: 10-05-2010]
Mesothelioma (malignant) of pleura (disorder)
James Malone
malignant mesothelioma of pleura[accessedResource: DOID:7474][accessDate: 10-05-2010]
GeneRIF:15014036
malignant mesothelioma of pleura
NCIt:C7376
malignant Mesothelioma of the Pleura[accessedResource: DOID:7474][accessDate: 10-05-2010]
SNOMEDCT:254645002
GeneRIF:12080392
GeneRIF:12393799
GeneRIF:12968670
GeneRIF:14727813
GeneRIF:12111646
Deafness NOS (disorder)
Deafness NOS (finding)[accessedResource: SNOMEDCT:267678002][accessDate: 10-05-2010]
GeneRIF:12527136
Deafness NOS (disorder)[accessedResource: SNOMEDCT:267678002][accessDate: 10-05-2010]
GeneRIF:12022040
GeneRIF:14648237
GeneRIF:15099592
GeneRIF:12107438
Deafness NOS
GeneRIF:12172392
GeneRIF:15710493
GeneRIF:12471561
SNOMEDCT:267678002
GeneRIF:12865758
GeneRIF:11584050
GeneRIF:15944150
GeneRIF:11977173
GeneRIF:11870684
NCIt:C27644
GeneRIF:12746400
GeneRIF:15855033
GeneRIF:12384781
GeneRIF:12382103
GeneRIF:12687499
GeneRIF:12910270
GeneRIF:15891640
GeneRIF:12620969
GeneRIF:12081719
GeneRIF:12505163
GeneRIF:11907649
GeneRIF:12621333
GeneRIF:12642503
GeneRIF:12068628
Deafness NOS (finding)
GeneRIF:15286153
GeneRIF:12403827
GeneRIF:12062767
GeneRIF:11333869
GeneRIF:15314067
GeneRIF:15226564
An inherited or acquired condition characterized by the complete loss of the ability to hear from one or both ears.[accessedResource: NCIt:C27644][accessDate: 10-05-2010]
GeneRIF:11807148
GeneRIF:12032315
GeneRIF:15905332
DOID:10005
GeneRIF:14985365
GeneRIF:12161469
GeneRIF:11976689
Deafness NOS[accessedResource: DOID:10005][accessDate: 10-05-2010]
GeneRIF:14556203
GeneRIF:14570705
GeneRIF:12920079
GeneRIF:12792423
GeneRIF:11709538
GeneRIF:12687421
GeneRIF:14532115
GeneRIF:11924819
GeneRIF:15015131
GeneRIF:12393794
GeneRIF:11850618
GeneRIF:12107817
GeneRIF:12176036
GeneRIF:16155570
GeneRIF:15996220
GeneRIF:15490091
GeneRIF:12419304
GeneRIF:15464308
GeneRIF:12136232
GeneRIF:12370316
GeneRIF:12140191
GeneRIF:11972037
GeneRIF:12560944
GeneRIF:12833159
GeneRIF:12075507
GeneRIF:15579465
deafness
GeneRIF:12651873
GeneRIF:12655418
GeneRIF:16088916
GeneRIF:11432967
GeneRIF:15083701
GeneRIF:11896458
GeneRIF:15326186
GeneRIF:14644237
GeneRIF:12522556
GeneRIF:12145746
GeneRIF:15857852
An inherited or acquired condition characterized by the complete loss of the ability to hear from one or both ears.
GeneRIF:12904681
GeneRIF:15044642
GeneRIF:12189487
GeneRIF:15350283
GeneRIF:12114484
GeneRIF:12325029
GeneRIF:14684684
GeneRIF:12810983
GeneRIF:11668644
GeneRIF:15482471
GeneRIF:12127154
GeneRIF:15300860
James Malone
GeneRIF:12064630
GeneRIF:15886106
GeneRIF:12490528
GeneRIF:14585957
GeneRIF:12654476
GeneRIF:12189493
GeneRIF:12746422
GeneRIF:14552423
GeneRIF:12717441
GeneRIF:15542390
GeneRIF:12169891
GeneRIF:12483295
GeneRIF:12121736
GeneRIF:12393046
A TERV is a cell line.
A TERV derives from a kidney.
TERV
Natural Language Generator 8th April 2010
James Malone
NCIt:C14165
Being approximately average or within certain limits; conforming with or constituting a norm or standard or level or type or social norm.
A normal class is a special type of disease factor used as a control, that is, one which is not known to be affected by any disease; being approximately average or within certain limits; conforming with or constituting a norm or standard or level or type or social norm.
Being approximately average or within certain limits; conforming with or constituting a norm or standard or level or type or social norm.[accessedResource: NCIt:C14165][accessDate: 10-05-2010]
normal
James Malone
Invasive Ductal Breast Carcinoma[accessedResource: NCIt:C4194][accessDate: 10-05-2010]
Infiltrating Ductal Carcinoma of the Breast[accessedResource: NCIt:C4194][accessDate: 10-05-2010]
Invasive Ductal Carcinoma, No Specific Type
The most common type of invasive breast carcinoma, accounting for approximately 70% of breast carcinomas. The gross appearance is usually typical with an irregular stellate outline. Microscopically, randomly arranged epithelial elements are seen. When large sheets of malignant cells are present, necrosis may be seen. With adequate tissue sampling, in situ carcinoma can be demonstrated in association with the infiltrating carcinoma. The in situ component is nearly always ductal but occasionally may be lobular or both.
Invasive Ductal Adenocarcinoma[accessedResource: NCIt:C4194][accessDate: 10-05-2010]
Invasive Ductal Carcinoma, NST
Invasive Ductal Breast Carcinoma
Infiltrating Ductal Carcinoma of Breast[accessedResource: NCIt:C4194][accessDate: 10-05-2010]
Infiltrating Ductal Adenocarcinoma[accessedResource: NCIt:C4194][accessDate: 10-05-2010]
Infiltrating Ductal Breast Carcinoma[accessedResource: NCIt:C4194][accessDate: 10-05-2010]
Invasive Ductal Carcinoma of Breast[accessedResource: NCIt:C4194][accessDate: 10-05-2010]
Invasive Ductal Carcinoma, NOS
The most common type of invasive breast carcinoma, accounting for approximately 70% of breast carcinomas. The gross appearance is usually typical with an irregular stellate outline. Microscopically, randomly arranged epithelial elements are seen. When large sheets of malignant cells are present, necrosis may be seen. With adequate tissue sampling, in situ carcinoma can be demonstrated in association with the infiltrating carcinoma. The in situ component is nearly always ductal but occasionally may be lobular or both.[accessedResource: NCIt:C4194][accessDate: 10-05-2010]
Invasive Ductal Carcinoma, NOS[accessedResource: NCIt:C4194][accessDate: 10-05-2010]
Infiltrating Ductal Carcinoma
Infiltrating Ductal Breast Carcinoma
Invasive Ductal Carcinoma, Not Otherwise Specified[accessedResource: NCIt:C4194][accessDate: 10-05-2010]
NCIt:C4194
Invasive Ductal Adenocarcinoma
Tomasz Adamusiak
Infiltrating Ductal Carcinoma of the Breast
invasive ductal carcinoma
Infiltrating Ductal Adenocarcinoma
Infiltrating Ductal Carcinoma of Breast
Invasive Ductal Carcinoma of Breast
Invasive Ductal Carcinoma, No Specific Type[accessedResource: NCIt:C4194][accessDate: 10-05-2010]
Invasive Ductal Carcinoma, NST[accessedResource: NCIt:C4194][accessDate: 10-05-2010]
Infiltrating Ductal Carcinoma[accessedResource: NCIt:C4194][accessDate: 10-05-2010]
Invasive Ductal Carcinoma of the Breast
Invasive Ductal Carcinoma of the Breast[accessedResource: NCIt:C4194][accessDate: 10-05-2010]
James Malone
Invasive Ductal Carcinoma, Not Otherwise Specified
SW403
James Malone
Ele Holloway
ch
ch[accessedResource: FBbt:00005215][accessDate: 10-05-2010]
scolopophorous organ
An auditory and vibration detector in insects
James Malone
Mechanosensory organ, generally attached to the body wall and consisting of one or more scolopidia.
chordotonal organ
scolopophorous organ[accessedResource: FBbt:00005215][accessDate: 10-05-2010]
FBbt:00005215
Mechanosensory organ, generally attached to the body wall and consisting of one or more scolopidia.[accessedResource: FBbt:00005215][accessDate: 10-05-2010]
MAT:0000209
Chordotonal organs are arthropod sensory structures consisting of special sensilla called the scolopidia, which are mechano-transducers and respond mainly to stretch or flexion. In insects, they consist of bundles of internal sensilla, each of which has a cap cell, an enveloping cell and one or more sense cells. The distal end of the organ is usually attached to the cuticle of the body wall, marked by a pit, a thickened disc or a nodule of chitin, and the base of the organ is connected with the hypodermis, often by a special ligament.
An auditory and vibration detector in insects[accessedResource: MAT:0000209][accessDate: 10-05-2010]
cardiotonic drugs
http://www.ebi.ac.uk/efo/EFO_0001866
CHEBI:38147
A drug that has a strengthening effect on the heart or that can increase cardiac output.
cardiotonic drug
James Malone
Ele Holloway
A Jiyoye is a cell line.
A Jiyoye is bearer of a Burkitt's lymphoma.
Natural Language Generator 8th April 2010
James Malone
Jiyoye
GeneRIF:15100674
Pneumopathy due to inhalation of other dust NOS (disorder)[accessedResource: SNOMEDCT:196015005][accessDate: 10-05-2010]
A bronchial disease that is characterized by chronic inflammation and narrowing of the airways, which is caused by a combination of environmental and genetic factors resulting in recurring periods of wheezing (a whistling sound while breathing), chest tightness, shortness of breath, mucus production and coughing. The symptoms appear due to a variety of triggers such as allergens, irritants, respiratory infections, weather changes, excercise, stress, reflux disease, medications, foods and emotional anxiety.
ASTHMA NOS W (AC) EXAC
GeneRIF:15356575
GeneRIF:16123393
GeneRIF:15066132
GeneRIF:16210640
Asthma (disorder)
GeneRIF:15976383
Asthmatic
GeneRIF:12642833
Bronchial asthma
Asthma NOS
GeneRIF:11940068
Asthma unspecified (disorder)
GeneRIF:15723126
GeneRIF:16027362
GeneRIF:11801688
GeneRIF:15528385
ASTHMA NOS[accessedResource: ICD9:493.90][accessDate: 10-05-2010]
Exercise induced asthma
GeneRIF:15087305
James Malone
GeneRIF:15604153
bronchial hyperreactivity[accessedResource: DOID:2841][accessDate: 10-05-2010]
Bronchial hyperreactivity
GeneRIF:15115168
Asthma NOS (disorder)[accessedResource: SNOMEDCT:266365004][accessDate: 10-05-2010]
Bronchial asthma[accessedResource: SNOMEDCT:195967001][accessDate: 10-05-2010]
GeneRIF:12915772
GeneRIF:15722346
DOID:2841
GeneRIF:12847279
GeneRIF:12751728
GeneRIF:14764726
GeneRIF:14734765
GeneRIF:15677460
GeneRIF:12373000
GeneRIF:11709756
chronic obstructive asthma with acute exacerbation[accessedResource: DOID:2841][accessDate: 10-05-2010]
GeneRIF:11466391
GeneRIF:15223611
Asthma (disorder)[accessedResource: SNOMEDCT:195967001][accessDate: 10-05-2010]
GeneRIF:15696081
GeneRIF:11786643
GeneRIF:12672051
GeneRIF:15944327
GeneRIF:12575459
chronic obstructive asthma with status asthmaticus[accessedResource: DOID:2841][accessDate: 10-05-2010]
SNOMEDCT:195967001
GeneRIF:15585884
GeneRIF:11692107
GeneRIF:15531759
chronic obstructive asthma with status asthmaticus
GeneRIF:15020290
GeneRIF:14520724
GeneRIF:12225952
Asthma, unspecified type, without mention of status asthmaticus
GeneRIF:11907117
GeneRIF:12847242
GeneRIF:16168397
Pneumopathy due to inhalation of other dust[accessedResource: SNOMEDCT:196013003][accessDate: 10-05-2010]
GeneRIF:12110844
GeneRIF:15059480
chronic obstructive asthma[accessedResource: DOID:2841][accessDate: 10-05-2010]
GeneRIF:14610476
GeneRIF:14657864
GeneRIF:12530117
GeneRIF:14657873
GeneRIF:16148052
GeneRIF:15153795
GeneRIF:16304252
GeneRIF:11839568
GeneRIF:12620968
GeneRIF:15612961
Pneumopathy due to inhalation of other dust NOS (disorder)
ASTHMA NOS W (AC) EXAC[accessedResource: ICD9:493.92][accessDate: 10-05-2010]
chronic obstructive asthma with acute exacerbation
SNOMEDCT:195979001
GeneRIF:12897738
Asthma, unspecified type, with acute exacerbation[accessedResource: ICD9:493.92][accessDate: 10-05-2010]
GeneRIF:15007350
GeneRIF:12063528
GeneRIF:12938094
GeneRIF:12406828
GeneRIF:12165540
GeneRIF:12876407
GeneRIF:15059478
GeneRIF:15179560
GeneRIF:11744622
GeneRIF:11898000
Exercise induced asthma[accessedResource: DOID:2841][accessDate: 10-05-2010]
Airway hyperreactivity
GeneRIF:14734780
GeneRIF:15764725
GeneRIF:14692664
asthma
GeneRIF:12047364
GeneRIF:12091879
GeneRIF:15879427
GeneRIF:16143586
GeneRIF:16115819
GeneRIF:12915771
Bronchial hypersensitivity[accessedResource: DOID:2841][accessDate: 10-05-2010]
Asthma, unspecified type, without mention of status asthmaticus[accessedResource: ICD9:493.90][accessDate: 10-05-2010]
GeneRIF:12209087
GeneRIF:16215326
GeneRIF:16026590
GeneRIF:16081847
GeneRIF:15207712
GeneRIF:12682233
SNOMEDCT:196015005
GeneRIF:12813022
GeneRIF:12077275
Asthma unspecified[accessedResource: SNOMEDCT:195979001][accessDate: 10-05-2010]
SNOMEDCT:196013003
GeneRIF:15947423
GeneRIF:11956218
GeneRIF:15318163
GeneRIF:16043121
NCIt:C28397
GeneRIF:16081038
GeneRIF:12900517
Asthma unspecified (disorder)[accessedResource: SNOMEDCT:195979001][accessDate: 10-05-2010]
DUST PNEUMONOPATHY NEC
Asthma unspecified
GeneRIF:12530118
DUST PNEUMONOPATHY NEC[accessedResource: ICD9:504][accessDate: 10-05-2010]
GeneRIF:14633511
GeneRIF:15356558
GeneRIF:15454733
GeneRIF:16034130
Hyperreactive airways disease[accessedResource: SNOMEDCT:195979001][accessDate: 10-05-2010]
GeneRIF:12524255
GeneRIF:11897983
GeneRIF:11813133
ICD9:493.92
BHR - Bronchial hyperreactivity[accessedResource: SNOMEDCT:195967001][accessDate: 10-05-2010]
Asthmatic[accessedResource: SNOMEDCT:195967001][accessDate: 10-05-2010]
GeneRIF:15007351
GeneRIF:11710537
GeneRIF:15003938
A chronic respiratory disease manifested as difficulty breathing due to the narrowing of bronchial passageways.[accessedResource: NCIt:C28397][accessDate: 10-05-2010]
GeneRIF:11842300
Asthma NOS (disorder)
GeneRIF:11972612
GeneRIF:11972486
GeneRIF:12370400
GeneRIF:16236836
GeneRIF:12145647
GeneRIF:12774669
GeneRIF:12083965
GeneRIF:15709049
Pneumopathy due to inhalation of other dust NOS[accessedResource: SNOMEDCT:196015005][accessDate: 10-05-2010]
BHR - Bronchial hyperreactivity
Bronchial hypersensitivity
GeneRIF:12671058
Pneumopathy due to inhalation of other dust NOS
Hyperreactive airway disease
GeneRIF:14564349
Bronchial hyperresponsiveness
GeneRIF:15557163
GeneRIF:14564352
Exercise-induced asthma (disorder)
GeneRIF:11994485
GeneRIF:15051937
GeneRIF:15007353
GeneRIF:16036415
GeneRIF:15496624
GeneRIF:12861851
GeneRIF:15300848
GeneRIF:12237016
GeneRIF:12482203
ICD9:493.90
GeneRIF:15744536
GeneRIF:14707054
GeneRIF:15548573
GeneRIF:12325261
GeneRIF:11896460
GeneRIF:15282200
Pneumopathy due to inhalation of other dust
GeneRIF:16098057
GeneRIF:15345705
GeneRIF:14597484
GeneRIF:15696078
GeneRIF:15602630
GeneRIF:12204890
GeneRIF:15059493
GeneRIF:11668616
GeneRIF:15356557
GeneRIF:15743779
GeneRIF:15192232
GeneRIF:11907124
GeneRIF:15961692
GeneRIF:12234263
GeneRIF:16236890
GeneRIF:12530121
GeneRIF:12897754
GeneRIF:16150927
Exercise-induced asthma (disorder)[accessedResource: DOID:2841][accessDate: 10-05-2010]
GeneRIF:16024972
GeneRIF:12376349
GeneRIF:14761934
GeneRIF:15817799
Airway hyperreactivity[accessedResource: SNOMEDCT:195967001][accessDate: 10-05-2010]
GeneRIF:11725301
Pneumonopathy due to inhalation of other dust
GeneRIF:15579447
GeneRIF:12204872
Hyperreactive airways disease
GeneRIF:16000330
A chronic respiratory disease manifested as difficulty breathing due to the narrowing of bronchial passageways.
GeneRIF:12646606
GeneRIF:11912176
ICD9:493
Pneumonopathy due to inhalation of other dust[accessedResource: ICD9:504][accessDate: 10-05-2010]
GeneRIF:12794006
chronic obstructive asthma
GeneRIF:12063521
GeneRIF:11842292
GeneRIF:15853952
Pneumopathy due to inhalation of other dust (disorder)
Hyperreactive airway disease[accessedResource: SNOMEDCT:195967001][accessDate: 10-05-2010]
GeneRIF:11953202
Bronchial hyperresponsiveness[accessedResource: SNOMEDCT:195967001][accessDate: 10-05-2010]
A bronchial disease that is characterized by chronic inflammation and narrowing of the airways, which is caused by a combination of environmental and genetic factors resulting in recurring periods of wheezing (a whistling sound while breathing), chest tightness, shortness of breath, mucus production and coughing. The symptoms appear due to a variety of triggers such as allergens, irritants, respiratory infections, weather changes, excercise, stress, reflux disease, medications, foods and emotional anxiety.[accessedResource: DOID:2841][accessDate: 10-05-2010]
SNOMEDCT:266365004
GeneRIF:12789231
GeneRIF:15282199
GeneRIF:12396623
ICD9:493.8
GeneRIF:15201134
Asthma, unspecified type, with acute exacerbation
GeneRIF:14718253
GeneRIF:12045241
GeneRIF:15105161
GeneRIF:15039137
GeneRIF:14682393
GeneRIF:12091169
Pneumopathy due to inhalation of other dust (disorder)[accessedResource: SNOMEDCT:196013003][accessDate: 10-05-2010]
GeneRIF:15941840
GeneRIF:15478389
GeneRIF:11466392
ICD9:504
GeneRIF:15988535
GeneRIF:15634264
GeneRIF:12594058
GeneRIF:12754192
ICD9:493.9
GeneRIF:16021473
GeneRIF:15073379
GeneRIF:12754510
GeneRIF:12170265
GeneRIF:15148962
GeneRIF:14754534
GeneRIF:15467329
GeneRIF:12626595
GeneRIF:11692112
GeneRIF:15131571
GeneRIF:15710598
GeneRIF:12568496
GeneRIF:12730147
Digit
true
Duplicated class, use digit EFO_0000881
obsolete_digit
A finger or toe in human beings or corresponding part in other vertebrates.[accessedResource: NCIt:C40186][accessDate: 10-05-2010]
NCIt:C40186
A finger or toe in human beings or corresponding part in other vertebrates.
Digital
Digital[accessedResource: NCIt:C40186][accessDate: 10-05-2010]
Digit[accessedResource: NCIt:C40186][accessDate: 10-05-2010]
JAX:000659
C3H/HeJ is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/000659.html
C3H/HeJ
James Malone
FMAID:9597
A pair of salivary glands is present in the thorax, just above the forelegs and flanking the oesophagus. In both sexes of most species each gland normally consists of three lobes, two lateral and one median.
A pair of salivary glands is present in the thorax, just above the forelegs and flanking the oesophagus. In both sexes of most species each gland normally consists of three lobes, two lateral and one median.[accessedResource: TGMA:0001804][accessDate: 10-05-2010]
TGMA:0001804
EHDAA:7987
salivary gland
BTO:0001203
James Malone
TADS:0000119
SAEL:92
The glands of the oral cavity whose combined secretion constitutes the saliva.[accessedResource: BTO:0001203][accessDate: 10-05-2010]
MAT:0000079
FBbt:00005382
Lobular organ the parenchyma of which consists of glandular acini which communicate the oral cavity. Examples: parotid gland, sublingual gland, lingual salivary gland.[accessedResource: FMAID:9597][accessDate: 10-05-2010]
The glands of the oral cavity whose combined secretion constitutes the saliva.
EMAPA:17751
MA:0000346
Lobular organ the parenchyma of which consists of glandular acini which communicate the oral cavity. Examples: parotid gland, sublingual gland, lingual salivary gland.
1.8
true
obsolete_K562
James Malone
Ele Holloway
duplicate of EFO_0002067 (K562)
A mononuclear phagocyte which differentiates from monocytes, is typically resident in a particular tissue, and capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells (Cell Ontology).[accessedResource: NIFSTD:sao185843373][accessDate: 10-05-2010]
BTO:0000801
macrophage
A mononuclear phagocyte present in variety of tissues, typically differentiated from monocytes, capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells.[accessedResource: CL:0000235][accessDate: 10-05-2010]
Relatively long-lived phagocytic cell of mammalian tissues, derived from blood monocyte. Macrophages from different sites have distinctly different properties. Main types are peritoneal and alveolar macrophages, tissue macrophages (histiocytes), Kuppfer cells of the liver, and osteoclasts. In response to foreign materials may become stimulated or activated. Macrophages play an important role in killing of some bacteria, protozoa, and tumour cells, release substances that stimulate other cells of the immune system, and are involved in antigen presentation. May further differentiate within chronic inflammatory lesions to epithelioid cells or may fuse to form foreign body giant cells or Langhans' giant cells.
monocyte-derived macrophage
CL:0000235
macrophagocyte
histiocyte
histiocyte[accessedResource: CL:0000235][accessDate: 10-05-2010]
A mononuclear phagocyte present in variety of tissues, typically differentiated from monocytes, capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells.
Tomasz Adamusiak
NIFSTD:sao185843373
Relatively long-lived phagocytic cell of mammalian tissues, derived from blood monocyte. Macrophages from different sites have distinctly different properties. Main types are peritoneal and alveolar macrophages, tissue macrophages (histiocytes), Kuppfer cells of the liver, and osteoclasts. In response to foreign materials may become stimulated or activated. Macrophages play an important role in killing of some bacteria, protozoa, and tumour cells, release substances that stimulate other cells of the immune system, and are involved in antigen presentation. May further differentiate within chronic inflammatory lesions to epithelioid cells or may fuse to form foreign body giant cells or Langhans' giant cells.[accessedResource: BTO:0000801][accessDate: 10-05-2010]
A mononuclear phagocyte which differentiates from monocytes, is typically resident in a particular tissue, and capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells (Cell Ontology).
James Malone
bone marrow-derived macrophage
macrophagocyte[accessedResource: BTO:0000801][accessDate: 10-05-2010]
ZFS:0000019
gastrula shield
James Malone
http://www.ebi.ac.uk/efo/EFO_0002031
A biexponential transformation is a data transformation that, for each (one dimensional) real number input x, outputs an approximation (found, e.g. with the Newton's method) to a solution y of the equation B(y)-x=0, where B denotes a b transformation.
biexponential transformation
James Malone
A biopterin that has formula C9H15N5O3.
Tetrahydrobiopterin
C9H15N5O3
Ele Holloway
CHEBI:15372
CC(O)C(O)C1CNc2nc(N)[nH]c(=O)c2N1
http://www.ebi.ac.uk/efo/EFO_0002397
5,6,7,8-tetrahydrobiopterin
2-amino-6-(1,2-dihydroxypropyl)-5,6,7,8-tetrahydropteridin-4(3H)-one
2-Amino-6-(1,2-dihydroxypropyl)-5,6,7,8-tetrahydoro-4(1H)-pteridinone
InChIKey=FNKQXYHWGSIFBK-JFOIYUNLCJ
InChI=1/C9H15N5O3/c1-3(15)6(16)4-2-11-7-5(12-4)8(17)14-9(10)13-7/h3-4,6,12,15-16H,2H2,1H3,(H4,10,11,13,14,17)/f/h11,14H,10H2
BH4
James Malone
CaHPV10
James Malone
Ele Holloway
InChIKey=QDLHCMPXEPAAMD-QAIWCSMKBP
James Malone
wortmannin
InChI=1/C23H24O8/c1-10(24)30-13-7-22(2)12(5-6-14(22)25)16-18(13)23(3)15(9-28-4)31-21(27)11-8-29-20(17(11)23)19(16)26/h8,12-13,15H,5-7,9H2,1-4H3/t12-,13+,15+,22-,23-/m0/s1
Ele Holloway
C23H24O8
http://www.ebi.ac.uk/efo/EFO_0002494
An organic heteropentacyclic compound that has formula C23H24O8.
[H][C@@]12CCC(=O)[C@@]1(C)C[C@@H](OC(C)=O)C1=C2C(=O)c2occ3C(=O)O[C@H](COC)[C@@]1(C)c23
Wartmannin
(1S,6bR,9aS,11R,11bR)-9a,11b-dimethyl-1-[(methyloxy)methyl]-3,6,9-trioxo-1,6,6b,7,8,9,9a,10,11,11b-decahydro-3H-furo[4,3,2-de]indeno[4,5-h]isochromen-11-yl acetate
CHEBI:52289
PO:0004542
BTO:0001181
James Malone
rhizome
A somewhat elongate usually horizontal subterranean plant stem that is often thickened by deposits of reserve food material, produces shoots above and roots below, and is distinguished from a true root in possessing buds, nodes, and usually scalelike leaves.[accessedResource: BTO:0001181][accessDate: 10-05-2010]
A somewhat elongate usually horizontal subterranean plant stem that is often thickened by deposits of reserve food material, produces shoots above and roots below, and is distinguished from a true root in possessing buds, nodes, and usually scalelike leaves.
GRO:0005811
MAT:0000219
GRO:0005811[accessedResource: BTO:0001181][accessDate: 10-05-2010]
James Malone
BTO:0001580
FMAID:19325
EMAPA:19088
FBbt:00004965
Either of the paired ducts in the human male that are formed by the junction of the duct from the seminal vesicle with the vas deferens, pass through the prostate, and open into or close to the prostatic utricle.[accessedResource: BTO:0001580][accessDate: 10-05-2010]
TADS:0000489
MAT:0000170
Either of the paired ducts in the human male that are formed by the junction of the duct from the seminal vesicle with the vas deferens, pass through the prostate, and open into or close to the prostatic utricle.
ejaculatory duct
ductus ejaculatorius[accessedResource: BTO:0001580][accessDate: 10-05-2010]
ductus ejaculatorius
FBbt:00005418
A0antEndo
A0antEndo[accessedResource: FBbt:00005418][accessDate: 10-05-2010]
anterior endoderm anlage in statu nascendi
James Malone
NCIt:C28147
embryo early (growth) stage
Embryologic
Embryologic[accessedResource: NCIt:C28147][accessDate: 10-05-2010]
embryo
James Malone
true
volume percent
GM12873
James Malone
WBbt:0005332
TAO:0001573
trunk ganglion
Ganglion which is located in the trunk.
Ganglion which is located in the trunk.[accessedResource: TAO:0001573][accessDate: 10-05-2010]
body ganglion
James Malone
MO_563
http://www.ebi.ac.uk/efo/EFO_0002019
A container which is used to maintain constant contact of a liquid on an array. This can be either a glass vial or slide.
hybridization chamber
James Malone
BTO:0001295
EHDAA:6029
MAT:0000340
"head capsule"[accessedResource: TGMA:0000003][accessDate: 10-05-2010]
The sclerotized skull-like part of the head.
"head capsule"
cranium
skull[accessedResource: TAO:0000737][accessDate: 10-05-2010]
James Malone
The sclerotized skull-like part of the head.[accessedResource: TGMA:0000003][accessDate: 10-05-2010]
FMAID:87596
"Kopfkapsel"
skeletal system of head[accessedResource: MAT:0000340][accessDate: 10-05-2010]
TAO:0000737
EMAPA:17680
skeletal system of head
"Kopfkapsel"[accessedResource: TGMA:0000003][accessDate: 10-05-2010]
adult cranium[accessedResource: TGMA:0000003][accessDate: 10-05-2010]
Skeletal system that is part of the head, including the splanchnocranium, chondrocranium, and dermatocranium.[accessedResource: ZFA:0000737][accessDate: 10-05-2010]
cranial skeleton
ZFA:0000737
TGMA:0000003
Skeletal system which is part of the skull, including the splanchnocranium, chondrocranium, and dermatocranium.[accessedResource: TAO:0000737][accessDate: 10-05-2010]
craniofacial skeleton bone
1: The skull of a vertebrate.n2: The portion of the skull enclosing the brain; the braincase.
cranial skeleton[accessedResource: MAT:0000340][accessDate: 10-05-2010]
Skeletal system that is part of the head, including the splanchnocranium, chondrocranium, and dermatocranium.
MA:0000316
adult cranium
Skeletal system which is part of the skull, including the splanchnocranium, chondrocranium, and dermatocranium.
skull
1: The skull of a vertebrate.n2: The portion of the skull enclosing the brain; the braincase.[accessedResource: BTO:0001295][accessDate: 10-05-2010]
DOID:3458
breast adenocarcinoma
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158596&type=germplasm
CS57572 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158596&type=germplasm
CS57572
James Malone
DMS-79
DMS79
James Malone
Ele Holloway
primary dilated cardiomyopathy (disorder)[accessedResource: DOID:12930][accessDate: 10-05-2010]
CCM - Congestive cardiomyopathy
CCM - Congestive cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
GeneRIF:15833432
GeneRIF:12912811
GeneRIF:11846417
Cardiomyopathy, Dilated, CMD1A
Primary dilated cardiomyopathy
SNOMEDCT:399020009
Congestive Cardiomyopathies
Congestive cardiomyopathy (disorder)[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
GeneRIF:15601645
GeneRIF:14625273
MP:0002795
Primary dilated cardiomyopathy[accessedResource: SNOMEDCT:195021004][accessDate: 10-05-2010]
GeneRIF:15735644
Cardiomyopathy, Dilated, CMD1A[accessedResource: MSH:D002311][accessDate: 10-05-2010]
GeneRIF:14660611
Congestive dilated cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
GeneRIF:15146952
Congestive dilated cardiomyopathy
James Malone
Cardiomyopathy, Dilated, LMNA
A form of CARDIAC MUSCLE disease that is characterized by ventricular dilation, VENTRICULAR DYSFUNCTION, and HEART FAILURE. Risk factors include SMOKING; ALCOHOL DRINKING; HYPERTENSION; INFECTION; PREGNANCY; and mutations in the LMNA gene encoding LAMIN TYPE A, a NUCLEAR LAMINA protein.
Primary dilated cardiomyopathy (disorder)
GeneRIF:12642359
GeneRIF:12644006
GeneRIF:12197595
Cardiomyopathy, Dilated, with Conduction Deffect1
A form of CARDIAC MUSCLE disease that is characterized by ventricular dilation, VENTRICULAR DYSFUNCTION, and HEART FAILURE. Risk factors include SMOKING; ALCOHOL DRINKING; HYPERTENSION; INFECTION; PREGNANCY; and mutations in the LMNA gene encoding LAMIN TYPE A, a NUCLEAR LAMINA protein.[accessedResource: MSH:D002311][accessDate: 10-05-2010]
GeneRIF:15080529
GeneRIF:11792810
Cardiomyopathy, Familial Idiopathic[accessedResource: MSH:D002311][accessDate: 10-05-2010]
GeneRIF:11950896
MSH:D002311
GeneRIF:15238456
GeneRIF:15034580
GeneRIF:11984589
GeneRIF:16288714
GeneRIF:12869376
Cardiomyopathies, Congestive[accessedResource: MSH:D002311][accessDate: 10-05-2010]
GeneRIF:12177436
Familial Idiopathic Cardiomyopathies
Cardiomyopathies, Dilated
Cardiomyopathy, Congestive[accessedResource: MSH:D002311][accessDate: 10-05-2010]
DCM - Dilated cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
GeneRIF:11897440
GeneRIF:15340063
SNOMEDCT:195021004
Cardiomyopathy, Dilated, with Conduction Deffect1[accessedResource: MSH:D002311][accessDate: 10-05-2010]
GeneRIF:12072561
GeneRIF:12628721
decreased function of the heart associated with cardiac enlargement and congestive heart failure
Tomasz Adamusiak
Congestive cardiomyopathy (disorder)
DCM - Dilated cardiomyopathy
decreased function of the heart associated with cardiac enlargement and congestive heart failure[accessedResource: MP:0002795][accessDate: 10-05-2010]
HP:0001644
GeneRIF:12163370
Idiopathic Cardiomyopathies, Familial[accessedResource: MSH:D002311][accessDate: 10-05-2010]
GeneRIF:15347805
GeneRIF:15485910
GeneRIF:15763499
Cardiomyopathy, Congestive
COCM - Congestive cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
GeneRIF:12610310
GeneRIF:11896212
GeneRIF:12359139
Cardiomyopathies, Dilated[accessedResource: MSH:D002311][accessDate: 10-05-2010]
dilated cardiomyopathy
GeneRIF:14575316
DOID:12930
GeneRIF:12920582
GeneRIF:12628722
COCM - Congestive cardiomyopathy
GeneRIF:11972068
Cardiomyopathy, Dilated, LMNA[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Familial Idiopathic Cardiomyopathy
GeneRIF:15345656
UO:0000047
A derived unit which is a standard measure of the amount of a 2-dimensional flat surface.
http://www.ebi.ac.uk/efo/EFO_0001693
area unit
true
James Malone
An area unit is a derived unit which is a standard measure of the amount of a 2-dimensional flat surface.
Tumor Royale
Tumor Royale[accessedResource: MSH:D018318][accessDate: 10-05-2010]
A type of neurofibroma manifesting as a diffuse overgrowth of subcutaneous tissue, usually involving the face, scalp, neck, and chest but occasionally occurring in the abdomen or pelvis. The tumors tend to progress, and may extend along nerve roots to eventually involve the spinal roots and spinal cord. This process is almost always a manifestation of NEUROFIBROMATOSIS 1. (From Adams et al., Principles of Neurology, 6th ed, p1016; J Pediatr 1997 Nov;131(5):678-82)[accessedResource: MSH:D018318][accessDate: 10-05-2010]
Neuromas, Plexiform[accessedResource: MSH:D018318][accessDate: 10-05-2010]
Plexiform Neurofibromas
GeneRIF:11857752
GeneRIF:12782393
SNOMEDCT:403818001
plexiform neurofibroma
A type of neurofibroma manifesting as a diffuse overgrowth of subcutaneous tissue, usually involving the face, scalp, neck, and chest but occasionally occurring in the abdomen or pelvis. The tumors tend to progress, and may extend along nerve roots to eventually involve the spinal roots and spinal cord. This process is almost always a manifestation of NEUROFIBROMATOSIS 1. (From Adams et al., Principles of Neurology, 6th ed, p1016; J Pediatr 1997 Nov;131(5):678-82)
Neuroma, Plexiform
Tomasz Adamusiak
Plexiform Neuroma[accessedResource: MSH:D018318][accessDate: 10-05-2010]
Elephantiasis Neuromatosis
A type of neurofibroma manifesting as a diffuse overgrowth of subcutaneous tissue, usually involving the face, scalp, neck, and chest but occasionally occurring in the abdomen or pelvis. The tumors tend to progress, and may extend along nerve roots to eventually involve the spinal roots and spinal cord. This process is almost always a manifestation of NEUROFIBROMATOSIS 1 (MeSH).[accessedResource: NIFSTD:birnlex_12606][accessDate: 10-05-2010]
Elephantiasis Neuromatoses
Plexiform neurofibroma (morphologic abnormality)
SNOMEDCT:41252002
Plexiform neurofibroma (disorder)
Pachydermatoceles[accessedResource: MSH:D018318][accessDate: 10-05-2010]
Pachydermatocele[accessedResource: NIFSTD:birnlex_12606][accessDate: 10-05-2010]
Plexiform neurofibroma (disorder)[accessedResource: SNOMEDCT:403818001][accessDate: 10-05-2010]
A type of neurofibroma manifesting as a diffuse overgrowth of subcutaneous tissue, usually involving the face, scalp, neck, and chest but occasionally occurring in the abdomen or pelvis. The tumors tend to progress, and may extend along nerve roots to eventually involve the spinal roots and spinal cord. This process is almost always a manifestation of NEUROFIBROMATOSIS 1 (MeSH).
Pachydermatoceles
Pachydermatocele
Neuromas, Plexiform
Plexiform Neurofibromas[accessedResource: MSH:D018318][accessDate: 10-05-2010]
An elongated and multinodular neurofibroma, formed when the tumor involves either multiple trunks of a plexus or multiple fascicles of a large nerve, such as the sciatic. Some plexiform neurofibromas resemble a bag of worms, others produce a massive ropy enlargement of the nerve. (Adapted from WHO.)
NIFSTD:birnlex_12606
Plexiform neurofibroma (morphologic abnormality)[accessedResource: DOID:5151][accessDate: 10-05-2010]
James Malone
MSH:D018318
Elephantiasis Neuromatosis[accessedResource: MSH:D018318][accessDate: 10-05-2010]
An elongated and multinodular neurofibroma, formed when the tumor involves either multiple trunks of a plexus or multiple fascicles of a large nerve, such as the sciatic. Some plexiform neurofibromas resemble a bag of worms, others produce a massive ropy enlargement of the nerve. (Adapted from WHO.)[accessedResource: NCIt:C3797][accessDate: 10-05-2010]
Elephantiasis Neuromatoses[accessedResource: MSH:D018318][accessDate: 10-05-2010]
DOID:5151
NCIt:C3797
HL-60 cell[accessedResource: BTO:0000738][accessDate: 10-05-2010]
HL60 cell
HL-60 cell
BTO:0000738
obsolete_HL60
HL60 cell[accessedResource: BTO:0000738][accessDate: 10-05-2010]
James Malone
Human acute myeloid leukemia established from the peripheral blood of a 35-year-old woman with acute myeloid leukemia (AML FAB M2) in 1976.
Ele Holloway
duplicate with EFO_0002793
Human acute myeloid leukemia established from the peripheral blood of a 35-year-old woman with acute myeloid leukemia (AML FAB M2) in 1976.[accessedResource: BTO:0000738][accessDate: 10-05-2010]
2.1
HL-60
true
hormone role
James Malone
JCRB0815
ABC-1
James Malone
Ele Holloway
HuT78
James Malone
Ele Holloway
tempol
http://www.ebi.ac.uk/efo/EFO_0001894
nutraceutical
CHEBI:50733
Dietary Supplement
James Malone
Food Supplementation
Nutritional supplement
A product in capsule, tablet or liquid form that provide essential nutrients, such as a vitamin, an essential mineral, a protein, an herb, or similar nutritional substance.
Y. Apidianakis, M.N. Mindrinos, W. Xiao, G.W. Lau, R.L. Baldini, R.W. Davis and L.G. Rahme, Profiling early infection responses: Pseudomonas aeruginosa eludes host defenses by suppressing antimicrobial peptide gene expression, Proc. Natl. Acad. Sci. USA 102 (2005), pp. 2573–2578
A Pseudomonas aeruginosa CF5 infection is a Pseudomonas infection of strain CF5.
Pseudomonas aeruginosa CF5 infection
James Malone
SCaBER
James Malone
Ele Holloway
male gonad
orchis[accessedResource: BTO:0001363][accessDate: 10-05-2010]
SAEL:93
BTO:0001363
A typically paired male reproductive gland that produces sperm and that in most mammals is contained within the scrotum at sexual maturity.
testiculus
James Malone
orchis
testicle
testiculus[accessedResource: BTO:0001363][accessDate: 10-05-2010]
A typically paired male reproductive gland that produces sperm and that in most mammals is contained within the scrotum at sexual maturity.[accessedResource: BTO:0001363][accessDate: 10-05-2010]
testicle[accessedResource: BTO:0001363][accessDate: 10-05-2010]
testis
WBbt:0005321
MA:0002765
NCIt:C15421
postmenopausal
James Malone
A carrier or inert medium used as a solvent (or diluent) in which some compound is formulated and or administered.
vehicle
James Malone
A brain structure developmental tissue is a nervous system developmental tissue from which mature, fully developed brain structures will emerge during growth of an organism.
brain structure developmental tissue
James Malone
MAT:0000487
dorsal fin
Dorsal is a geometric modifier describing parts of an organism relating to or situated near or on the back. For example, dorsal fin.
dorsal
James Malone
acute Gastritis
Other specified gastritis (disorder)
Idiopathic erosive/hemorrhagic gastritis (disorder)[accessedResource: DOID:4032][accessDate: 10-05-2010]
Other specified gastritis, without mention of hemorrhage
NCIt:C26929
CG - Chronic gastritis[accessedResource: SNOMEDCT:8493009][accessDate: 10-05-2010]
Other specified gastritis[accessedResource: DOID:4032][accessDate: 10-05-2010]
Hemorrhagic Gastritis
GeneRIF:11642721
Gastritis (disorder)[accessedResource: DOID:4032][accessDate: 10-05-2010]
acute hemorrhagic gastritis [dup] (disorder)[accessedResource: DOID:4032][accessDate: 10-05-2010]
Gastritis [Ambiguous]
SNOMEDCT:8493009
acute gastritis, without mention of hemorrhage
Other specified gastritis NOS (disorder)
Chronic gastritis, NOS
acute haemorrhagic gastritis[accessedResource: DOID:4032][accessDate: 10-05-2010]
chronic gastritis
SNOMEDCT:196736000
Chronic gastritis, NOS[accessedResource: SNOMEDCT:8493009][accessDate: 10-05-2010]
acute gastritis, without mention of hemorrhage[accessedResource: DOID:4032][accessDate: 10-05-2010]
acute gastric mucosal erosion (disorder)[accessedResource: DOID:4032][accessDate: 10-05-2010]
Gastritis (disorder)
GASTRITIS HEMORRHAGIC[accessedResource: DOID:4032][accessDate: 10-05-2010]
acute gastritis (disorder)
GeneRIF:12738381
Gastritis unspecified (disorder)
chronic gastritis NOS (disorder)[accessedResource: DOID:4032][accessDate: 10-05-2010]
Erosive gastropathy (disorder)
acute hemorrhagic gastritis [dup] (disorder)
acute hemorrhagic gastritis (disorder)[accessedResource: DOID:4032][accessDate: 10-05-2010]
Erosive gastropathy (disorder)[accessedResource: DOID:4032][accessDate: 10-05-2010]
Other specified gastritis, without mention of hemorrhage[accessedResource: DOID:4032][accessDate: 10-05-2010]
CG - Chronic gastritis
Gastritis [Ambiguous][accessedResource: DOID:4032][accessDate: 10-05-2010]
Idiopathic erosive/hemorrhagic gastritis (disorder)
Erosive Gastritis
gastritis
acute gastritis (disorder)[accessedResource: DOID:4032][accessDate: 10-05-2010]
Erosive Gastritis[accessedResource: DOID:4032][accessDate: 10-05-2010]
GeneRIF:15104366
DOID:4032
Gastritis unspecified (disorder)[accessedResource: DOID:4032][accessDate: 10-05-2010]
acute haemorrhagic gastritis
gastritis[accessedResource: DOID:4032][accessDate: 10-05-2010]
acute hemorrhagic gastritis (disorder)
chronic gastritis NOS (disorder)
acute gastric mucosal erosion (disorder)
Chronic gastritis (disorder)
Other specified gastritis NOS (disorder)[accessedResource: DOID:4032][accessDate: 10-05-2010]
acute gastritis[accessedResource: DOID:4032][accessDate: 10-05-2010]
acute gastritis, with hemorrhage[accessedResource: DOID:4032][accessDate: 10-05-2010]
Other specified gastritis, with hemorrhage
Other specified gastritis, with hemorrhage[accessedResource: DOID:4032][accessDate: 10-05-2010]
James Malone
Other specified gastritis (disorder)[accessedResource: DOID:4032][accessDate: 10-05-2010]
GeneRIF:12508351
acute gastritis with hemorrhage
Other specified gastritis
chronic gastritis (disorder)[accessedResource: DOID:4032][accessDate: 10-05-2010]
GeneRIF:15962365
66cl4
James Malone
Ele Holloway
RGD:1578703
Syracuse Low Avoidance
James Malone
EHDAA:3694
Organ component of neuraxis that has as its parts the tectum, cerebral peduncle, midbrain tegmentum and cerebral aqueduct. Examples: There is only one midbrain.
The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally.
midbrain
Mesencephalon
The middle of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain.[accessedResource: BTO:0000138][accessDate: 10-05-2010]
EV:0100242
SAEL:68
TAO:0000128
FMAID:61993
The middle of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain.
Tomasz Adamusiak
Organ component of neuraxis that has as its parts the tectum, cerebral peduncle, midbrain tegmentum and cerebral aqueduct. Examples: There is only one midbrain.[accessedResource: FMAID:61993][accessDate: 10-05-2010]
The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally. Kimmel et al, 1995.
MFO:0002420
NIFSTD:birnlex_1667
BTO:0000138
MAT:0000106
XAO:0000014
The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally.[accessedResource: ZFA:0000128][accessDate: 10-05-2010]
The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally. Kimmel et al, 1995.[accessedResource: TAO:0000128][accessDate: 10-05-2010]
EMAPA:16974
MA:0000207
James Malone
mesencephalon[accessedResource: BTO:0000138][accessDate: 10-05-2010]
ZFA:0000128
The transparent part of the coat of the eyeball that covers the iris and pupil and admits light to the interior.
A dome-shaped, transparent, avascular tissue covering the front of the eye. It is composed of five layers: squamous epithelium, Bowman's membrane, stroma, Descemet's membrane, and endothelium. Refraction of light contributing to eye's focusing ability is its characteristic function. It contains unmyelinated nerve endings which are responsible for the high sensitivity of the tissue.
James Malone
BTO:0000286
A dome-shaped, transparent, avascular tissue covering the front of the eye. It is composed of five layers: squamous epithelium, Bowman's membrane, stroma, Descemet's membrane, and endothelium. Refraction of light contributing to eye's focusing ability is its characteristic function. It contains unmyelinated nerve endings which are responsible for the high sensitivity of the tissue.[accessedResource: NCIt:C12342][accessDate: 10-05-2010]
cornea structure
The transparent part of the coat of the eyeball that covers the iris and pupil and admits light to the interior.[accessedResource: BTO:0000286][accessDate: 10-05-2010]
NCIt:C12342
cornea
A549
James Malone
Natural Language Generator 8th April 2010
James Malone
A BDCM is a cell line.
A BDCM is all of the following: something that is bearer of an acute myeloid leukemia, something that derives from a homo sapiens, and something that derives from a lymphatic system.
BDCM
Ele Holloway
GM07034
James Malone
MO_454
in vivo design
Tomasz Adamusiak
The probabilty of continuance of life or existence especially under adverse conditions; Probably need a parent survival metric or similar
survival probability
James Malone
The structure into which a haploid microspore develops; contains a halpoid tube nucleus and two haploid sperm nuclei at maturity.[accessedResource: BTO:0001097][accessDate: 10-05-2010]
GRO:0005650
pollen grain
pollen grain[accessedResource: BTO:0001097][accessDate: 10-05-2010]
GRO:0005650[accessedResource: BTO:0001097][accessDate: 10-05-2010]
BTO:0001097
PO:0020097
generative cell (male)[accessedResource: MAT:0000216][accessDate: 10-05-2010]
James Malone
MAT:0000216
The structure into which a haploid microspore develops; contains a halpoid tube nucleus and two haploid sperm nuclei at maturity.
pollen
generative cell (male)
MKN-1 cell
MKN1
MKN-1
Human gastric adenosquamous carcinoma cell line.
James Malone
MKN1 cell
JCRB0252
MKN1 cell[accessedResource: BTO:0002384][accessDate: 10-05-2010]
MKN-1 cell[accessedResource: BTO:0002384][accessDate: 10-05-2010]
Human gastric adenosquamous carcinoma cell line.[accessedResource: BTO:0002384][accessDate: 10-05-2010]
Ele Holloway
BTO:0002384
FBbt:00001778
wing disc
wing disc[accessedResource: FBbt:00001778][accessDate: 10-05-2010]
dorsal mesothoracic disc
James Malone
C57BL/6J
http://phenome.jax.org/db/q?rtn=strains/details&strainid=7
NIFSTD:birnlex_393
C57BL6J[accessedResource: NIFSTD:birnlex_393][accessDate: 10-05-2010]
Tomasz Adamusiak
C57BL/6J is a mouse strain as described in Jackson Laboratory http://phenome.jax.org/db/q?rtn=strains/details&strainid=7
James Malone
C57BL6J
http://en.wikipedia.org/wiki/Tiling_array
Helen Parkinson
genome tiling array
A tiling array is an array which has short fragments of nucleic acid immobilized on a substrate. These are designed to cover the whole genome of the target species. Tiling arrays are used to determine genome binding in ChIP assays or to identify transcribed regions.
tiling array
CHEBI:26764
hormone steroide
hormona esteroide
Any steroid that act as hormone.
hormones steroides
Steroidhormone
http://www.ebi.ac.uk/efo/EFO_0001614
hormonas esteroideas
steroid hormones
Steroidhormon
steroid hormone
mesendoderm[accessedResource: ZFA:0000117][accessDate: 10-05-2010]
TAO:0000117
The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm. Kimmel et al, 1995.
hypoblast
mesendoderm
The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm.
ZFA:0000117
The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm.[accessedResource: ZFA:0000117][accessDate: 10-05-2010]
James Malone
The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm. Kimmel et al, 1995.[accessedResource: TAO:0000117][accessDate: 10-05-2010]
perchloride of mercury
InChIKey=LWJROJCJINYWOX-ZZJRNXLTCY
mercury dichloride
dichlorure de mercure
ClHgCl
chlorure mercurique
corrosive sublimate
mercury(II) chloride
CHEBI:31823
James Malone
InChI=1/2ClH.Hg/h2*1H;/q;;+2/p-2/f2Cl.Hg/h2*1h;/q2*-1;m
mercury(2+) chloride
A mercury coordination entity that has formula Cl2Hg.
mercuric bichloride
Mercuric chloride
mercury perchloride
bichlorure de mercure
hydrargyrum bichloratum
HgCl2
corrosive mercury chloride
Cl2Hg
Quecksilber(II)-chlorid
Sulema
Sublimat
Cl[Hg]Cl
http://www.ebi.ac.uk/efo/EFO_0001671
mercury bichloride
dichloromercury
sublimate
Increased pressure in the eyeball due to obstruction of the outflow of aqueous humor.
GeneRIF:15342693
GeneRIF:12655282
Glaucoma associated with other ocular disorders NOS[accessedResource: SNOMEDCT:193565002][accessDate: 10-05-2010]
DOID:1686
Unspecified glaucoma
GeneRIF:12687498
SNOMEDCT:23986001
GeneRIF:12073024
Glaucoma associated with other ocular disorders NOS (disorder)
Other specified glaucoma NOS[accessedResource: SNOMEDCT:193568000][accessDate: 10-05-2010]
Glaucoma associated with other ocular disorders NOS (disorder)[accessedResource: SNOMEDCT:193565002][accessDate: 10-05-2010]
Glaucoma associated with other ocular disorders (disorder)[accessedResource: SNOMEDCT:193559002][accessDate: 10-05-2010]
Increased pressure in the eyeball due to obstruction of the outflow of aqueous humor.[accessedResource: NCIt:C26782][accessDate: 10-05-2010]
Glaucoma associated with other ocular disorders NOS
GeneRIF:15723004
GeneRIF:16043855
GeneRIF:14725620
GeneRIF:15579465
SNOMEDCT:193559002
Other specified glaucoma NOS (disorder)
GeneRIF:15823921
Glaucoma NOS (disorder)
GeneRIF:15509533
ICD9:365.8
James Malone
GeneRIF:15557444
GeneRIF:12676895
GeneRIF:12060848
Other specified glaucoma[accessedResource: ICD9:365.89][accessDate: 10-05-2010]
GeneRIF:16103353
Other specified forms of glaucoma
GeneRIF:15498064
GeneRIF:12789547
ICD9:365.6
GLAUCOMA NOS
NCIt:C26782
GeneRIF:11774072
Other specified glaucoma
GeneRIF:12811537
Glaucoma (disorder)[accessedResource: SNOMEDCT:23986001][accessDate: 10-05-2010]
GeneRIF:12828935
GLAUCOMA NEC[accessedResource: ICD9:365.89][accessDate: 10-05-2010]
GeneRIF:14740993
GLAUCOMA NEC
GeneRIF:11910561
ICD9:365.9
GeneRIF:15638362
Other specified forms of glaucoma (disorder)
SNOMEDCT:193566001
Other specified glaucoma NOS (disorder)[accessedResource: SNOMEDCT:193568000][accessDate: 10-05-2010]
Glaucoma associated with other ocular disorders (disorder)
GeneRIF:15895394
GeneRIF:15326130
glaucoma
GeneRIF:12920093
Glaucoma associated with other ocular disorders
SNOMEDCT:193565002
Glaucoma NOS (disorder)[accessedResource: SNOMEDCT:193569008][accessDate: 10-05-2010]
Other specified forms of glaucoma (disorder)[accessedResource: SNOMEDCT:193566001][accessDate: 10-05-2010]
GeneRIF:15304601
ICD9:365
GeneRIF:15519534
Other specified forms of glaucoma[accessedResource: SNOMEDCT:193566001][accessDate: 10-05-2010]
Other specified glaucoma NOS
Glaucoma associated with other ocular disorders[accessedResource: SNOMEDCT:193559002][accessDate: 10-05-2010]
SNOMEDCT:193568000
GeneRIF:15677485
Glaucoma (disorder)
Glaucoma NOS[accessedResource: SNOMEDCT:193569008][accessDate: 10-05-2010]
SNOMEDCT:193569008
GeneRIF:15370540
Unspecified glaucoma[accessedResource: ICD9:365.9][accessDate: 10-05-2010]
ICD9:365.89
C33A
James Malone
Ele Holloway
inhibiteur
inhibidor
http://www.ebi.ac.uk/efo/EFO_0001898
A substance that diminishes the rate of a chemical reaction.
inhibitor
James Malone
http://jaxmice.jax.org/strain/009257.html
PMID:15457343
The ILSXISS#/Tej recombinant inbred (RI) strains originate from crosses between ILS/IbgTejJ (009324) and ISS/IbgTejJ (009325) They may be used to study the genetics of neurogenetic, neuropharmacological and behavioral phenotypes involved in alcohol-related traits and complex or potentially complex physiologic phenotypes (including differences in longevity under ad libitum and dietary restriction conditions, aging, body temperature and body weight).
ILSXISS#/Tej
Tomasz Adamusiak
EMF-19
EFM19
James Malone
Ele Holloway
MSH:D002282
Bronchiolo-alveolar adenocarcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:112677002][accessDate: 10-05-2010]
Bronchioloalveolar Adenocarcinoma of the Lung[accessedResource: NCIt:C2923][accessDate: 10-05-2010]
Carcinoma, Bronchiolar[accessedResource: MSH:D002282][accessDate: 10-05-2010]
Alveolar adenocarcinoma (morphologic abnormality)
Alveolar Adenocarcinomas
[M]Bronchiolo-alveolar adenocarcinoma[accessedResource: SNOMEDCT:112677002][accessDate: 10-05-2010]
Bronchioloalveolar Carcinomas[accessedResource: MSH:D002282][accessDate: 10-05-2010]
Bronchiolo-Alveolar Carcinoma of Lung
Bronchioloalveolar carcinoma - disorder
Bronchiolo-Alveolar Carcinoma
Carcinomas, Bronchiolo-Alveolar[accessedResource: MSH:D002282][accessDate: 10-05-2010]
Bronchioloalveolar Lung Adenocarcinoma
Bronchiolo-Alveolar Adenocarcinomas[accessedResource: MSH:D002282][accessDate: 10-05-2010]
[M]Bronchiolo-alveolar adenocarcinoma
Alveolar Adenocarcinoma[accessedResource: MSH:D002282][accessDate: 10-05-2010]
Bronchioalveolar Adenocarcinoma of Lung[accessedResource: NCIt:C2923][accessDate: 10-05-2010]
A carcinoma thought to be derived from epithelium of terminal bronchioles, in which the neoplastic tissue extends along the alveolar walls and grows in small masses within the alveoli. Involvement may be uniformly diffuse and massive, or nodular, or lobular. The neoplastic cells are cuboidal or columnar and form papillary structures. Mucin may be demonstrated in some of the cells and in the material in the alveoli, which also includes denuded cells. Metastases in regional lymph nodes, and in even more distant sites, are known to occur, but are infrequent. (From Stedman, 25th ed)
A well or moderately differentiated morphologic variant of lung adenocarcinoma characterized by tumor growth along the alveolar structures without stromal, vascular, or pleural invasion.[accessedResource: NCIt:C2923][accessDate: 10-05-2010]
A carcinoma thought to be derived from epithelium of terminal bronchioles, in which the neoplastic tissue extends along the alveolar walls and grows in small masses within the alveoli. Involvement may be uniformly diffuse and massive, or nodular, or lobular. The neoplastic cells are cuboidal or columnar and form papillary structures. Mucin may be demonstrated in some of the cells and in the material in the alveoli, which also includes denuded cells. Metastases in regional lymph nodes, and in even more distant sites, are known to occur, but are infrequent. (From Stedman, 25th ed)[accessedResource: MSH:D002282][accessDate: 10-05-2010]
Bronchiolo-Alveolar Carcinoma[accessedResource: MSH:D002282][accessDate: 10-05-2010]
Carcinoma, Bronchioloalveolar[accessedResource: MSH:D002282][accessDate: 10-05-2010]
Carcinomas, Bronchioloalveolar
Bronchioloalveolar adenocarcinoma
Alveolar Carcinomas
SNOMEDCT:373627005
Carcinomas, Bronchiolo-Alveolar
SNOMEDCT:112677002
Alveolar Carcinomas[accessedResource: MSH:D002282][accessDate: 10-05-2010]
Bronchiolo-Alveolar Lung Carcinoma[accessedResource: NCIt:C2923][accessDate: 10-05-2010]
Alveolar Adenocarcinomas[accessedResource: MSH:D002282][accessDate: 10-05-2010]
Carcinomas, Bronchiolar
Bronchiolo-alveolar adenocarcinoma[accessedResource: SNOMEDCT:112677002][accessDate: 10-05-2010]
NCIt:C2923
Bronchiolo-Alveolar Lung Carcinoma
Bronchiolo-Alveolar Carcinoma of the Lung
BAC[accessedResource: NCIt:C2923][accessDate: 10-05-2010]
BAC
Bronchioloalveolar adenocarcinoma[accessedResource: DOID:4926][accessDate: 10-05-2010]
Bronchioloalveolar Adenocarcinoma of Lung
Bronchioalveolar Adenocarcinoma of Lung
James Malone
Bronchiolo-Alveolar Carcinoma of Lung[accessedResource: NCIt:C2923][accessDate: 10-05-2010]
Bronchiolo-Alveolar Adenocarcinomas
Bronchioalveolar Lung Carcinoma
Alveolar cell carcinoma[accessedResource: SNOMEDCT:112677002][accessDate: 10-05-2010]
Alveolar adenocarcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:36310008][accessDate: 10-05-2010]
Bronchioloalveolar Lung Adenocarcinoma[accessedResource: NCIt:C2923][accessDate: 10-05-2010]
Bronchioloalveolar Carcinoma
Bronchiolar carcinoma
Bronchioalveolar Adenocarcinoma of the Lung[accessedResource: NCIt:C2923][accessDate: 10-05-2010]
Bronchioalveolar Lung Carcinoma[accessedResource: NCIt:C2923][accessDate: 10-05-2010]
Alveolar cell carcinoma
bronchoalveolar adenocarcinoma
bronchiolo-alveolar adenocarcinoma
Alveolar Adenocarcinoma
A well or moderately differentiated morphologic variant of lung adenocarcinoma characterized by tumor growth along the alveolar structures without stromal, vascular, or pleural invasion.
Bronchiolo-Alveolar Carcinoma of the Lung[accessedResource: NCIt:C2923][accessDate: 10-05-2010]
Bronchiolar Carcinomas[accessedResource: MSH:D002282][accessDate: 10-05-2010]
Alveolar carcinoma[accessedResource: SNOMEDCT:36310008][accessDate: 10-05-2010]
Bronchioloalveolar Adenocarcinoma of the Lung
DOID:4926
Bronchioloalveolar Adenocarcinoma of Lung[accessedResource: NCIt:C2923][accessDate: 10-05-2010]
Bronchioloalveolar carcinoma (disorder)[accessedResource: DOID:4926][accessDate: 10-05-2010]
Bronchioalveolar Adenocarcinoma of the Lung
Bronchiolar adenocarcinoma[accessedResource: SNOMEDCT:112677002][accessDate: 10-05-2010]
Alveolar Carcinoma
Bronchiolo-alveolar adenocarcinoma (morphologic abnormality)
SNOMEDCT:36310008
Bronchiolar adenocarcinoma
FBbt:00005476
dorsal apodeme specific anlage
James Malone
hemopoietic progenitor cell
A progenitor cell of any hematopoietic lineage, potentially multipotent.[accessedResource: CL:0000837][accessDate: 10-05-2010]
Tomasz Adamusiak
Jie Zheng
A progenitor cell of any hematopoietic lineage, potentially multipotent.
hemopoietic progenitor cell[accessedResource: CL:0000837][accessDate: 10-05-2010]
CL:0000837
hematopoietic progenitor cell
RCHACV
James Malone
Ele Holloway
true
NCIt:C52733
Accumbens Nucleus
obsolete_accumbens nucleus
duplicated use class EFO_0000906
GeneRIF:12855673
GeneRIF:15861005
GeneRIF:14575314
Infarction of heart[accessedResource: SNOMEDCT:22298006][accessDate: 10-05-2010]
Cardiac infarction[accessedResource: SNOMEDCT:22298006][accessDate: 10-05-2010]
GeneRIF:15193812
Infarction of heart
GeneRIF:12482844
Myocardial infarction, NOS[accessedResource: SNOMEDCT:22298006][accessDate: 10-05-2010]
GeneRIF:14986172
GeneRIF:15140581
GeneRIF:12649084
GeneRIF:11816707
GeneRIF:14652632
GeneRIF:11861414
GeneRIF:11834491
GeneRIF:12456499
GeneRIF:14993131
Heart attack, NOS[accessedResource: SNOMEDCT:22298006][accessDate: 10-05-2010]
GeneRIF:12958147
GeneRIF:11994975
GeneRIF:15009479
GeneRIF:12081989
GeneRIF:15808838
GeneRIF:14770184
GeneRIF:12426569
GeneRIF:12697693
GeneRIF:15170085
GeneRIF:12165563
GeneRIF:15175818
GeneRIF:12535745
GeneRIF:14656915
GeneRIF:15520319
GeneRIF:15458948
GeneRIF:15297380
GeneRIF:14646971
Heart attack, NOS
GeneRIF:15931235
GeneRIF:15467919
GeneRIF:15665106
GeneRIF:12362496
Cardiac infarction
GeneRIF:12819031
GeneRIF:14575298
GeneRIF:12818419
GeneRIF:12070000
GeneRIF:15678273
GeneRIF:11926892
Myocardial infarction (disorder)
GeneRIF:11903359
Gross necrosis of the myocardium, as a result of interruption of the blood supply to the area, as in coronary thrombosis.[accessedResource: NCIt:C27996][accessDate: 10-05-2010]
MSH:D009203
GeneRIF:15081319
GeneRIF:12746412
Infarction of heart, NOS
Gross necrosis of the myocardium, as a result of interruption of the blood supply to the area, as in coronary thrombosis.
GeneRIF:12969888
GeneRIF:12452318
GeneRIF:16186408
GeneRIF:16102106
GeneRIF:12771003
GeneRIF:15883205
GeneRIF:14729404
NCIt:C27996
GeneRIF:15699461
GeneRIF:12081984
GeneRIF:15298543
GeneRIF:15583729
GeneRIF:14966366
GeneRIF:12663371
Myocardial infarct
GeneRIF:11858502
GeneRIF:15213208
GeneRIF:15466927
myocardial infarction
GeneRIF:15075297
GeneRIF:14631138
GeneRIF:12011770
GeneRIF:12600920
GeneRIF:15226628
GeneRIF:15376321
GeneRIF:15533863
GeneRIF:12514664
GeneRIF:15319210
GeneRIF:15129282
GeneRIF:15998711
GeneRIF:15681698
Myocardial infarction NOS
GeneRIF:15234427
GeneRIF:16159602
GeneRIF:14517168
GeneRIF:15269835
GeneRIF:15793582
GeneRIF:14530192
Myocardial Infarcts
GeneRIF:16116695
GeneRIF:12760310
GeneRIF:12745799
Cardiac infarction, NOS
GeneRIF:14717963
GeneRIF:12535806
GeneRIF:12483464
GeneRIF:12395208
GeneRIF:12855229
GeneRIF:12615902
GeneRIF:12891167
DOID:5844
NECROSIS of the MYOCARDIUM caused by an obstruction of the blood supply to the heart (CORONARY CIRCULATION).[accessedResource: MSH:D009203][accessDate: 10-05-2010]
GeneRIF:11871391
GeneRIF:15842378
GeneRIF:15616022
GeneRIF:12898814
SNOMEDCT:22298006
GeneRIF:14871556
GeneRIF:12805025
GeneRIF:15907784
Heart attack[accessedResource: SNOMEDCT:22298006][accessDate: 10-05-2010]
GeneRIF:15201542
GeneRIF:14500723
MI, MYOCARDIAL INFARCTION
Myocardial Infarctions[accessedResource: DOID:5844][accessDate: 10-05-2010]
GeneRIF:15466009
GeneRIF:15533859
GeneRIF:15292372
NECROSIS of the MYOCARDIUM caused by an obstruction of the blood supply to the heart (CORONARY CIRCULATION).
Infarction of heart, NOS[accessedResource: SNOMEDCT:22298006][accessDate: 10-05-2010]
GeneRIF:11999647
GeneRIF:12714332
Myocardial Infarctions
Cardiac infarction, NOS[accessedResource: SNOMEDCT:22298006][accessDate: 10-05-2010]
Myocardial infarction (disorder)[accessedResource: DOID:5844][accessDate: 10-05-2010]
GeneRIF:15764682
GeneRIF:14556196
GeneRIF:12844196
MI
GeneRIF:15140146
heart attack
GeneRIF:14983241
GeneRIF:12860906
GeneRIF:15210453
GeneRIF:15576653
GeneRIF:15754085
GeneRIF:16087130
GeneRIF:12430844
GeneRIF:14962947
GeneRIF:15256074
GeneRIF:12200370
GeneRIF:12824724
GeneRIF:12392996
GeneRIF:15763077
GeneRIF:12514663
GeneRIF:14600184
GeneRIF:14581297
Infarcts, Myocardial[accessedResource: MSH:D009203][accessDate: 10-05-2010]
GeneRIF:14645853
GeneRIF:14693682
GeneRIF:12469616
GeneRIF:15150438
GeneRIF:11934213
GeneRIF:15539626
MI[accessedResource: NCIt:C27996][accessDate: 10-05-2010]
GeneRIF:12237129
GeneRIF:15978110
GeneRIF:15949932
Myocardial Infarct[accessedResource: NCIt:C27996][accessDate: 10-05-2010]
GeneRIF:15520258
GeneRIF:12719858
INFARCTION (MI), MYOCARDIAL[accessedResource: NCIt:C27996][accessDate: 10-05-2010]
GeneRIF:16276010
James Malone
GeneRIF:12855940
GeneRIF:11820456
GeneRIF:12853162
GeneRIF:12226742
GeneRIF:14653443
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311941
CS57520 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311941
CS57520
James Malone
http://jaxmice.jax.org/strain/009259.html
ILSXISS7/TejJ
Tomasz Adamusiak
YCC6
James Malone
Ele Holloway
293T
James Malone
C6H11NOS2
CS(=O)CCCCN=C=S
http://www.ebi.ac.uk/efo/EFO_0001617
InChIKey=SUVMJBTUFCVSAD-UHFFFAOYAY
sulforaphane
CHEBI:47807
InChI=1/C6H11NOS2/c1-10(8)5-3-2-4-7-6-9/h2-5H2,1H3
1-isothiocyanato-4-(methylsulfinyl)butane
4-isothiocyanatobutyl methyl sulfoxide
A sulfoxide that has formula C6H11NOS2.
Sulforafan
PC-14
James Malone
Ele Holloway
Acetylcysteine
(R)-mercapturic acid
(2R)-2-acetylamino-3-sulfanylpropanoic acid
acetylcysteinum
N-acetyl-L-cysteine
C5H9NO3S
N-acetylcysteine
CHEBI:28939
CC(=O)N[C@@H](CS)C(O)=O
(R)-2-acetylamino-3-mercaptopropanoic acid
An acetylcysteine that has formula C5H9NO3S.
L-acetylcysteine
The N-acetylated derivative of natural amino acid L-cysteine.
mercapturic acid
L-alpha-acetamido-beta-mercaptopropionic acid
http://www.ebi.ac.uk/efo/EFO_0001576
acetilcisteina
InChI=1/C5H9NO3S/c1-3(7)6-4(2-10)5(8)9/h4,10H,2H2,1H3,(H,6,7)(H,8,9)/t4-/m0/s1/f/h6,8H
InChIKey=PWKSKIMOESPYIA-JVBVHTJODB
WBbt:0005440
MAT:0000341
pharyngeal nervous system
James Malone
A motility assay is an assay which measures the controlled movement of a population of cells.
motility assay
James Malone
Flora Logan
MA:0001067
inferior colliculus
James Malone
Ele Holloway
NCIt:C15294
Jie Zheng
Excision of the Pancreas[accessedResource: NCIt:C15294][accessDate: 10-05-2010]
Pancreas Excision
Tomasz Adamusiak
pancreatectomy
Surgical removal of part or all of the pancreas.
Pancreas Excision[accessedResource: NCIt:C15294][accessDate: 10-05-2010]
Excision of the Pancreas
Surgical removal of part or all of the pancreas.[accessedResource: NCIt:C15294][accessDate: 10-05-2010]
NCIt:C33073
A lymph node located in the mediastinum. Mediastinal lymph nodes are arranged in three groups, one on the lateral, another on the medial, and a third on the anterior aspect of the vessels; the third group is, however, sometimes absent.
A lymph node located in the mediastinum. Mediastinal lymph nodes are arranged in three groups, one on the lateral, another on the medial, and a third on the anterior aspect of the vessels; the third group is, however, sometimes absent.[accessedResource: NCIt:C33073][accessDate: 10-05-2010]
mediastinal lymph node
James Malone
MO_807
pathogenicity design
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158630&type=germplasm
CS57606 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158630&type=germplasm
CS57606
James Malone
NCI Metathesaurus http://ncimeta.nci.nih.gov/MetaServlet/ResultServlet?cui=C0019247 Date Accessed: 30th October 2007
Genetic Diseases are diseases in which inherited genes predispose to increased risk. The genetic disorders associated with cancer often result from an alteration or mutation in a single gene. The diseases range from rare dominant cancer family syndrome to familial tendencies in which low-penetrance genes may interact with other genes or environmental factors to induce cancer. Research may involve clinical, epidemiologic, and laboratory studies of persons, families, and populations at high risk of these disorders.
genetic disorder
James Malone
SJRH30
James Malone
Ele Holloway
GRO:0005441[accessedResource: BTO:0000072][accessDate: 10-05-2010]
carpel
PO:0009030
James Malone
pistil[accessedResource: BTO:0000072][accessDate: 10-05-2010]
GRO:0005441
MAT:0000516
BTO:0000072
pistil
The female reproductive part of a flower, consisting of stigma, style, and ovary.
The female reproductive part of a flower, consisting of stigma, style, and ovary.[accessedResource: BTO:0000072][accessDate: 10-05-2010]
The process of applying a solvent (e.g. water) or some solution (e.g. SSC/SDS) to a BioMaterial or an array to remove impurities or unwanted compounds.
washing
James Malone
vulva sarcoma
MO_572
A luminous intensity unit which equal to the luminous intensity, in a given direction, of a source that emits monochromatic radiation of frequency 540 x 1012 hertz and that has a radiant intensity in that direction of 1/683 watt per steradian.
A candela is a luminous intensity unit which equal to the luminous intensity, in a given direction, of a source that emits monochromatic radiation of frequency 540 x 1012 hertz and that has a radiant intensity in that direction of 1/683 watt per steradian.
http://www.ebi.ac.uk/efo/EFO_0001691
James Malone
Jie Zheng
cd
candela
Tomasz Adamusiak
true
James Malone
tiling path by array
An assay in which a tiling path array (where probes are arrayed covering target regions e.g. a genome or chromosome at very high density) is used to identify transcribed regions.
ArrayExpress production team
I am trying to determine the difference between a process and a behaviour. Is behaviour dancing any different from the process dancing?
Fixed action pattern courtship behaviour in Drosophila. Forager behaviour in honey bees.
behaviour
The actions or reactions of an object or organism, usually in relation to the environment or surrounding world of stimuli. E.g. Fixed action pattern courtship behaviour in Drosophila. Forager behaviour in honey bees.
behavior
James Malone
GM07000
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158836&type=germplasm
CS57812 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158836&type=germplasm
CS57812
James Malone
(Deoxyribonucleotide)n+m
DNAn+1
High molecular weight, linear polymers, composed of nucleotides containing deoxyribose and linked by phosphodiester bonds; DNA contain the genetic information of organisms.
NIFSTD:sao454034570
deoxyribonucleic acids
Deoxyribonucleic acid
Desoxyribonukleinsaeure
James Malone
DNS
Tomasz Adamusiak
(Deoxyribonucleotide)n
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001453
(Deoxyribonucleotide)m
A deoxyribonucleotide polymer that is the primary genetic material of all cells. Eukaryotic and prokaryotic organisms normally contain DNA in a double-stranded state, yet several important biological processes transiently involve single-stranded regions. DNA, which consists of a polysugar-phosphate backbone possessing projections of purines (adenine and guanine) and pyrimidines (thymine and cytosine), forms a double helix that is held together by hydrogen bonds between these purines and pyrimidines (adenine to thymine and guanine to cytosine) (MSH).[accessedResource: NIFSTD:sao454034570][accessDate: 10-05-2010]
thymus nucleic acid
DNA
A deoxyribonucleotide polymer that is the primary genetic material of all cells. Eukaryotic and prokaryotic organisms normally contain DNA in a double-stranded state, yet several important biological processes transiently involve single-stranded regions. DNA, which consists of a polysugar-phosphate backbone possessing projections of purines (adenine and guanine) and pyrimidines (thymine and cytosine), forms a double helix that is held together by hydrogen bonds between these purines and pyrimidines (adenine to thymine and guanine to cytosine) (MSH).
DNA is a chemical compound which has a high molecular weight, linear polymers and is composed of nucleotides containing deoxyribose and linked by phosphodiester bonds; DNA contains the genetic information of organisms.
MO_945
DNAn
desoxyribose nucleic acid
HCC2157
James Malone
GeneRIF:15502806
Small Cell Neuroendocrine Carcinoma of Lung
GeneRIF:15217946
SCLC - Small cell lung cancer[accessedResource: SNOMEDCT:254632001][accessDate: 10-05-2010]
GeneRIF:15864740
A highly aggressive subtype of lung carcinoma characterized by the presence of malignant small cells and necrosis. Metastatic disease is usually present at the time of diagnosis.
Small cell lung cancer[accessedResource: SNOMEDCT:254632001][accessDate: 10-05-2010]
SNOMEDCT:254633006
Carcinoma, Small Cell[accessedResource: MSH:D018288][accessDate: 10-05-2010]
SCLC[accessedResource: DOID:5409][accessDate: 10-05-2010]
Oat cell carcinoma of lung (disorder)[accessedResource: SNOMEDCT:254633006][accessDate: 10-05-2010]
Oat cell carcinoma of lung (disorder)
GeneRIF:12079519
GeneRIF:15806155
GeneRIF:15514966
GeneRIF:12555074
SCLC - Small cell lung cancer
Oat Cell Carcinoma
GeneRIF:11804687
GeneRIF:15112277
GeneRIF:14560006
GeneRIF:11839685
Small Cell Carcinomas[accessedResource: MSH:D018288][accessDate: 10-05-2010]
GeneRIF:16222316
Small Cell Carcinoma of Lung
A highly aggressive subtype of lung carcinoma characterized by the presence of malignant small cells and necrosis. Metastatic disease is usually present at the time of diagnosis. (NCI05)
GeneRIF:12792791
Small Cell Lung Cancer
GeneRIF:14592434
GeneRIF:12579323
GeneRIF:12177731
GeneRIF:14672915
GeneRIF:16125276
Small Cell Carcinoma of the Lung
small cell carcinoma of lung (disorder)[accessedResource: DOID:5409][accessDate: 10-05-2010]
GeneRIF:12569360
SCLC
GeneRIF:16077988
Small Cell Carcinomas
GeneRIF:16242000
GeneRIF:12356726
GeneRIF:16226111
GeneRIF:11782387
GeneRIF:12629521
GeneRIF:12611639
SNOMEDCT:254632001
GeneRIF:15205330
GeneRIF:15942654
GeneRIF:12605092
A highly aggressive subtype of lung carcinoma characterized by the presence of malignant small cells and necrosis. Metastatic disease is usually present at the time of diagnosis.[accessedResource: NCIt:C4917][accessDate: 10-05-2010]
Carcinoma, Oat Cell[accessedResource: MSH:D018288][accessDate: 10-05-2010]
An anaplastic, highly malignant, and usually bronchogenic carcinoma composed of small ovoid cells with scanty neoplasm. It is characterized by a dominant, deeply basophilic nucleus, and absent or indistinct nucleoli. (From Stedman, 25th ed; Holland et al., Cancer Medicine, 3d ed, p1286-7)[accessedResource: MSH:D018288][accessDate: 10-05-2010]
Carcinoma, Small Cell
GeneRIF:12767512
Small Cell Carcinoma of the Lung[accessedResource: NCIt:C4917][accessDate: 10-05-2010]
Lung Small Cell Neuroendocrine Carcinoma
Small Cell Neuroendocrine Carcinoma of the Lung[accessedResource: NCIt:C4917][accessDate: 10-05-2010]
GeneRIF:15184245
Small cell carcinoma of lung[accessedResource: SNOMEDCT:254632001][accessDate: 10-05-2010]
Oat Cell Carcinomas[accessedResource: MSH:D018288][accessDate: 10-05-2010]
GeneRIF:15387368
GeneRIF:15671551
GeneRIF:16140931
GeneRIF:12474049
GeneRIF:14614010
Lung Oat Cell Carcinoma
Oat Cell Carcinoma of the Lung
GeneRIF:14507113
GeneRIF:14515059
GeneRIF:12393872
Small Cell Neuroendocrine Carcinoma of the Lung
GeneRIF:12636057
Lung Small Cell Neuroendocrine Carcinoma[accessedResource: NCIt:C4917][accessDate: 10-05-2010]
DOID:5409
GeneRIF:14661059
GeneRIF:15279903
An anaplastic, highly malignant, and usually bronchogenic carcinoma composed of small ovoid cells with scanty neoplasm. It is characterized by a dominant, deeply basophilic nucleus, and absent or indistinct nucleoli. (From Stedman, 25th ed; Holland et al., Cancer Medicine, 3d ed, p1286-7)
small cell neuroendocrine carcinoma of lung[accessedResource: DOID:5409][accessDate: 10-05-2010]
GeneRIF:11948117
GeneRIF:14758730
Lung Oat Cell Carcinoma[accessedResource: NCIt:C4917][accessDate: 10-05-2010]
GeneRIF:15041716
GeneRIF:15870700
GeneRIF:12796027
small cell lung carcinoma
Oat cell carcinoma of lung
GeneRIF:14997382
GeneRIF:12499091
GeneRIF:12001123
GeneRIF:12432558
GeneRIF:11836568
GeneRIF:11955647
GeneRIF:12771999
NCIt:C4917
GeneRIF:15709164
GeneRIF:15623596
MSH:D018288
GeneRIF:16115696
Oat Cell Carcinomas
GeneRIF:16052521
GeneRIF:12684632
GeneRIF:12820319
James Malone
GeneRIF:15205342
GeneRIF:12820318
GeneRIF:16103065
Oat Cell Carcinoma of Lung[accessedResource: NCIt:C4917][accessDate: 10-05-2010]
GeneRIF:15026553
GeneRIF:12700635
Small cell carcinoma of lung (disorder)
GeneRIF:12757855
GeneRIF:12591723
Oat Cell Carcinoma of the Lung[accessedResource: NCIt:C4917][accessDate: 10-05-2010]
BG02ES is a cell line dervied from human embryonic stem cells.
BG02ES
James Malone
BG02
GeneRIF:12707933
GeneRIF:14623370
GeneRIF:12643442
GeneRIF:15211634
GeneRIF:15194506
GeneRIF:15337252
GeneRIF:12960753
[X]Schizophrenia, unspecified (disorder)
GeneRIF:16005437
GeneRIF:15768050
GeneRIF:12762588
GeneRIF:12911617
GeneRIF:15820319
Other specified types of schizophrenia, subchronic state
GeneRIF:16176390
Schizophrenia (disorder)[accessedResource: SNOMEDCT:58214004][accessDate: 10-05-2010]
Schizophrenia NOS[accessedResource: SNOMEDCT:191579000][accessDate: 10-05-2010]
GeneRIF:16139171
GeneRIF:12707930
GeneRIF:14572619
GeneRIF:12210271
GeneRIF:12851458
GeneRIF:15670788
SCHIZO NEC-SUBCHR/EXACER[accessedResource: ICD9:295.83][accessDate: 10-05-2010]
GeneRIF:15707951
GeneRIF:15719395
GeneRIF:15248869
GeneRIF:16027740
GeneRIF:12476325
GeneRIF:15340354
SCHIZO NOS-CHR/EXACERB[accessedResource: ICD9:295.94][accessDate: 10-05-2010]
GeneRIF:12111645
GeneRIF:12815739
GeneRIF:12824740
ICD9:295.90
SCHIZOPHRENIA NEC-REMISS[accessedResource: ICD9:295.85][accessDate: 10-05-2010]
GeneRIF:12808428
GeneRIF:15739191
GeneRIF:15768049
Schizophrenia NOS
GeneRIF:11880198
GeneRIF:12145742
GeneRIF:15276698
GeneRIF:12497607
GeneRIF:14767724
Schizophrenia NOS (disorder)[accessedResource: SNOMEDCT:191579000][accessDate: 10-05-2010]
GeneRIF:12555232
GeneRIF:15838535
GeneRIF:14960334
GeneRIF:15364420
GeneRIF:15318035
GeneRIF:15756053
GeneRIF:15124027
Other specified types of schizophrenia, chronic state with acute exacerbation[accessedResource: ICD9:295.84][accessDate: 10-05-2010]
GeneRIF:14623375
A major psychotic disorder characterized by abnormalities in the perception or expression of reality. It affects the cognitive and psychomotor functions. Common clinical signs and symptoms include delusions, hallucinations, disorganized thinking, and retreat from reality.
GeneRIF:12399140
GeneRIF:11922883
GeneRIF:15041036
GeneRIF:14623369
GeneRIF:11986986
GeneRIF:12746393
GeneRIF:12364586
GeneRIF:14684836
ICD9:295.82
GeneRIF:15522253
SCHIZO NEC-CHR/EXACERB
GeneRIF:12624948
SCHIZO NEC-CHR/EXACERB[accessedResource: ICD9:295.84][accessDate: 10-05-2010]
GeneRIF:12782967
GeneRIF:14699440
GeneRIF:11840505
GeneRIF:12874601
GeneRIF:11959925
GeneRIF:16044173
GeneRIF:15231749
GeneRIF:15211624
GeneRIF:11979062
GeneRIF:15261699
GeneRIF:15184063
GeneRIF:14973229
Other specified types of schizophrenia, chronic state
GeneRIF:12799614
GeneRIF:16139173
GeneRIF:14532331
GeneRIF:12149917
GeneRIF:12207142
Schizophrenia NOS (disorder)
GeneRIF:15532024
SCHIZOPHRENIA NOS-UNSPEC
GeneRIF:15545978
GeneRIF:15781144
GeneRIF:14684465
GeneRIF:15184103
GeneRIF:15793701
GeneRIF:12363390
GeneRIF:16223700
GeneRIF:15705354
GeneRIF:15913960
GeneRIF:14732600
GeneRIF:15961543
Other specified types of schizophrenia, in remission
GeneRIF:15564895
GeneRIF:12921913
Unspecified schizophrenia, subchronic state with acute exacerbation
Tomasz Adamusiak
GeneRIF:12627459
GeneRIF:12082567
GeneRIF:15362566
GeneRIF:12724619
GeneRIF:12454527
GeneRIF:12496953
GeneRIF:11807413
GeneRIF:12815737
SCHIZOPHRENIA NOS-UNSPEC[accessedResource: ICD9:295.90][accessDate: 10-05-2010]
SCHIZOPHRENIA NEC-SUBCHR[accessedResource: ICD9:295.81][accessDate: 10-05-2010]
GeneRIF:15162166
GeneRIF:14699426
GeneRIF:15913964
GeneRIF:12815738
GeneRIF:15363474
GeneRIF:14755437
GeneRIF:16056147
GeneRIF:16046005
GeneRIF:12915235
GeneRIF:15953671
GeneRIF:15917270
GeneRIF:14729827
GeneRIF:11959426
ICD9:295.9
Dementia Praecox[accessedResource: NIFSTD:birnlex_2104][accessDate: 10-05-2010]
GeneRIF:15318034
GeneRIF:12476323
GeneRIF:11920853
ICD9:295.80
GeneRIF:15121479
Schizophrenic disorders
GeneRIF:15338334
GeneRIF:15211626
GeneRIF:12223255
GeneRIF:16026766
GeneRIF:15274031
GeneRIF:15091315
GeneRIF:11986985
GeneRIF:12090821
GeneRIF:15647480
GeneRIF:15653269
SCHIZOPHRENIA NEC-UNSPEC[accessedResource: ICD9:295.80][accessDate: 10-05-2010]
GeneRIF:15303101
GeneRIF:12808432
GeneRIF:15329799
GeneRIF:15882913
GeneRIF:11803524
GeneRIF:15197397
GeneRIF:16044171
GeneRIF:15318033
GeneRIF:15671176
SNOMEDCT:192327003
GeneRIF:15289817
GeneRIF:15305151
GeneRIF:15522255
GeneRIF:12884975
GeneRIF:12210277
GeneRIF:11840504
GeneRIF:15274030
GeneRIF:12082558
GeneRIF:14569272
GeneRIF:15660667
GeneRIF:11803525
GeneRIF:14744462
GeneRIF:12402217
GeneRIF:15219469
GeneRIF:15098000
GeneRIF:12634474
GeneRIF:15820318
GeneRIF:11104840
SCHIZO NOS-CHR/EXACERB
GeneRIF:14732601
SCHIZOPHRENIA NEC-SUBCHR
GeneRIF:15694262
GeneRIF:11803513
GeneRIF:15091314
GeneRIF:15631889
GeneRIF:14732589
A major psychotic disorder characterized by abnormalities in the perception or expression of reality. It affects the cognitive and psychomotor functions. Common clinical signs and symptoms include delusions, hallucinations, disorganized thinking, and retreat from reality.[accessedResource: NCIt:C3362][accessDate: 10-05-2010]
GeneRIF:14754787
GeneRIF:12149916
GeneRIF:12425946
GeneRIF:15870291
Other specified types of schizophrenia, unspecified state[accessedResource: ICD9:295.80][accessDate: 10-05-2010]
GeneRIF:12140778
Other specified types of schizophrenia, chronic state[accessedResource: ICD9:295.82][accessDate: 10-05-2010]
GeneRIF:15318028
GeneRIF:15630410
GeneRIF:12812986
GeneRIF:14985387
GeneRIF:15774266
GeneRIF:14755440
GeneRIF:12815736
Schizophrenia (disorder)
GeneRIF:12109966
GeneRIF:12270648
GeneRIF:15939883
GeneRIF:15820227
NCIt:C3362
GeneRIF:12799619
GeneRIF:12506198
GeneRIF:15900221
ICD9:295
GeneRIF:11891283
GeneRIF:11840510
SCHIZO NOS-SUBCHR/EXACER[accessedResource: ICD9:295.93][accessDate: 10-05-2010]
GeneRIF:15858820
Unspecified schizophrenia, subchronic state with acute exacerbation[accessedResource: ICD9:295.93][accessDate: 10-05-2010]
GeneRIF:12815735
GeneRIF:15449241
Other specified types of schizophrenia, subchronic state[accessedResource: ICD9:295.81][accessDate: 10-05-2010]
GeneRIF:15167695
SCHIZOPHRENIA NEC-CHR[accessedResource: ICD9:295.82][accessDate: 10-05-2010]
SNOMEDCT:191526005
ICD9:295.81
Other specified types of schizophrenia, subchronic state with acute exacerbation
ICD9:295.8
GeneRIF:12474144
GeneRIF:15998189
GeneRIF:12097806
GeneRIF:12098102
Other specified types of schizophrenia, unspecified state
GeneRIF:11952921
GeneRIF:14647391
GeneRIF:15927374
GeneRIF:15940296
GeneRIF:15465982
GeneRIF:14623371
GeneRIF:12691788
Unspecified schizophrenia (disorder)[accessedResource: SNOMEDCT:191528006][accessDate: 10-05-2010]
GeneRIF:12605097
[X]Schizophrenia, unspecified[accessedResource: SNOMEDCT:192327003][accessDate: 10-05-2010]
GeneRIF:15007393
GeneRIF:16084002
GeneRIF:12192610
Other specified types of schizophrenia, in remission[accessedResource: ICD9:295.85][accessDate: 10-05-2010]
GeneRIF:15841096
GeneRIF:15737668
GeneRIF:15038995
GeneRIF:12082559
GeneRIF:15219467
GeneRIF:12648734
ICD9:295.85
ICD9:295.94
DOID:5419
GeneRIF:15219675
GeneRIF:15576061
GeneRIF:16039051
GeneRIF:16152568
GeneRIF:14618545
GeneRIF:15464270
GeneRIF:14741324
GeneRIF:12808430
GeneRIF:11807415
GeneRIF:12782962
GeneRIF:15048642
GeneRIF:12605094
GeneRIF:12399954
GeneRIF:15124015
GeneRIF:14966479
GeneRIF:16011574
GeneRIF:15211620
GeneRIF:15221639
GeneRIF:11042361
GeneRIF:15601604
Other specified types of schizophrenia, chronic state with acute exacerbation
Unspecified schizophrenia, chronic state with acute exacerbation[accessedResource: ICD9:295.94][accessDate: 10-05-2010]
GeneRIF:14642436
GeneRIF:12627456
GeneRIF:12814864
GeneRIF:14509080
GeneRIF:14755439
GeneRIF:15292665
GeneRIF:15211629
GeneRIF:15151706
GeneRIF:16056149
GeneRIF:15066891
GeneRIF:12875921
GeneRIF:16037677
GeneRIF:11681838
[X]Schizophrenia, unspecified (disorder)[accessedResource: SNOMEDCT:192327003][accessDate: 10-05-2010]
GeneRIF:15194870
SCHIZOPHRENIA NEC-CHR
GeneRIF:15363473
GeneRIF:15389752
GeneRIF:11807409
Dementia Praecox
GeneRIF:15885920
GeneRIF:15668720
GeneRIF:12591580
GeneRIF:15861039
GeneRIF:15508520
Schizophrenic disorders[accessedResource: SNOMEDCT:191526005][accessDate: 10-05-2010]
GeneRIF:15211628
GeneRIF:15362017
GeneRIF:14729256
GeneRIF:12815733
GeneRIF:15274033
GeneRIF:15617864
GeneRIF:15254796
GeneRIF:15694236
SNOMEDCT:191528006
GeneRIF:12722515
GeneRIF:12140776
GeneRIF:12950712
GeneRIF:15318026
GeneRIF:15271586
GeneRIF:12439825
GeneRIF:12478479
schizophrenia
[X]Schizophrenia, unspecified
GeneRIF:15310849
Schizophrenic Disorder
GeneRIF:15564899
GeneRIF:12682740
SCHIZO NOS-SUBCHR/EXACER
GeneRIF:12218662
GeneRIF:15657645
SCHIZOPHRENIA NEC-REMISS
GeneRIF:11702055
GeneRIF:15271585
GeneRIF:15539862
GeneRIF:15167690
GeneRIF:12610647
GeneRIF:12960750
Unspecified schizophrenia[accessedResource: SNOMEDCT:191528006][accessDate: 10-05-2010]
GeneRIF:14755443
GeneRIF:14582144
GeneRIF:15450681
SCHIZOPHRENIA NEC-UNSPEC
Unspecified schizophrenia, chronic state with acute exacerbation
Unspecified schizophrenia
GeneRIF:15009827
GeneRIF:15945063
GeneRIF:12782960
ICD9:295.93
GeneRIF:12898568
GeneRIF:15738936
Unspecified schizophrenia, unspecified state
GeneRIF:11840500
GeneRIF:14623376
GeneRIF:15900227
Schizophrenic disorders (disorder)[accessedResource: SNOMEDCT:191526005][accessDate: 10-05-2010]
GeneRIF:15531077
GeneRIF:15564900
GeneRIF:15660663
GeneRIF:12497630
GeneRIF:15048641
Unspecified schizophrenia, unspecified state[accessedResource: ICD9:295.90][accessDate: 10-05-2010]
GeneRIF:14518171
Other specified types of schizophrenia, subchronic state with acute exacerbation[accessedResource: ICD9:295.83][accessDate: 10-05-2010]
Schizophrenic disorders (disorder)
GeneRIF:15094474
GeneRIF:15653259
ICD9:295.84
GeneRIF:12815740
GeneRIF:14639047
SNOMEDCT:191579000
GeneRIF:14755438
GeneRIF:15820333
GeneRIF:15940305
GeneRIF:15820226
GeneRIF:12007452
SNOMEDCT:58214004
NIFSTD:birnlex_2104
GeneRIF:14699424
Unspecified schizophrenia (disorder)
GeneRIF:16082709
GeneRIF:12873802
GeneRIF:14623368
GeneRIF:12867516
ICD9:295.83
GeneRIF:11803454
GeneRIF:12436019
GeneRIF:15452587
GeneRIF:14732590
GeneRIF:15277408
GeneRIF:15652872
GeneRIF:15824744
GeneRIF:15124004
GeneRIF:15726117
Schizophrenic Disorder[accessedResource: NIFSTD:birnlex_2104][accessDate: 10-05-2010]
James Malone
GeneRIF:15305146
GeneRIF:15211633
GeneRIF:15114630
GeneRIF:16039057
SCHIZO NEC-SUBCHR/EXACER
GeneRIF:12931209
GeneRIF:13129656
TAO:0001114
EV:0100475
Cardinal body part, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with the skull, it is partially surrounded by skin of head. Examples: There is only one head.
adult head[accessedResource: MAT:0000294][accessDate: 10-05-2010]
WBbt:0005739
MAT:0000294
The anterior section (tagma) of the insect body bearing the compound eyes, antennae and mouthparts; separated from the thorax by the cervix.
FBbt:00000004
XAO:0003024
NIFSTD:birnlex_1230
MFO:0001660
Tomasz Adamusiak
The anterior section (tagma) of the insect body bearing the compound eyes, antennae and mouthparts; separated from the thorax by the cervix.[accessedResource: TGMA:0000002][accessDate: 10-05-2010]
BTO:0000282
The upper or anterior division of the animal body that contains the brain, the chief sense organs, and the mouth.
Head (volume)[accessedResource: FMAID:7154][accessDate: 10-05-2010]
James Malone
Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[accessedResource: TAO:0001114][accessDate: 10-05-2010]
TGMA:0000002
Head (volume)
FMAID:7154
Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.
SAEL:46
head
adult head
The upper or anterior division of the animal body that contains the brain, the chief sense organs, and the mouth.[accessedResource: BTO:0000282][accessDate: 10-05-2010]
Cardinal body part, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with the skull, it is partially surrounded by skin of head. Examples: There is only one head.[accessedResource: FMAID:7154][accessDate: 10-05-2010]
SW684
James Malone
Ele Holloway
Ele Holloway
James Malone
CESS
Colloid Adenocarcinoma of the Colon
Colon Colloid Adenocarcinoma[accessedResource: NCIt:C7966][accessDate: 10-05-2010]
Mucinous Adenocarcinoma of the Colon
Colonic Mucinous Adenocarcinoma[accessedResource: NCIt:C7966][accessDate: 10-05-2010]
Mucinous Adenocarcinoma of Colon[accessedResource: NCIt:C7966][accessDate: 10-05-2010]
NCIt:C7966
Colonic Colloid Adenocarcinoma[accessedResource: NCIt:C7966][accessDate: 10-05-2010]
Colloidal Adenocarcinoma of Colon[accessedResource: NCIt:C7966][accessDate: 10-05-2010]
Colonic Colloidal Adenocarcinoma[accessedResource: NCIt:C7966][accessDate: 10-05-2010]
Colloidal Adenocarcinoma of the Colon[accessedResource: NCIt:C7966][accessDate: 10-05-2010]
James Malone
An invasive adenocarcinoma of the colon characterized by the presence of pools of extracellular mucin. Malignant glandular epithelial cells are present in the mucin collections. Mucin constitutes more than 50% of the lesion.[accessedResource: NCIt:C7966][accessDate: 10-05-2010]
DOID:3029
Colloidal Adenocarcinoma of the Colon
Mucinous Adenocarcinoma of Colon
Colonic Colloid Adenocarcinoma
Colloidal Colon Adenocarcinoma[accessedResource: NCIt:C7966][accessDate: 10-05-2010]
Colloid Adenocarcinoma of Colon
Colonic Mucinous Adenocarcinoma
colon mucinous adenocarcinoma
Colonic Colloidal Adenocarcinoma
mucinous adenocarcinoma of the colon[accessedResource: DOID:3029][accessDate: 10-05-2010]
Colloidal Colon Adenocarcinoma
An invasive adenocarcinoma of the colon characterized by the presence of pools of extracellular mucin. Malignant glandular epithelial cells are present in the mucin collections. Mucin constitutes more than 50% of the lesion.
Colloid Adenocarcinoma of the Colon[accessedResource: NCIt:C7966][accessDate: 10-05-2010]
Colloidal Adenocarcinoma of Colon
Colon Colloid Adenocarcinoma
Colloid Adenocarcinoma of Colon[accessedResource: NCIt:C7966][accessDate: 10-05-2010]
Tomasz Adamusiak
NIFSTD:sao1843715402
RNS
ribose nucleic acid
A polynucleotide consisting essentially of chains with a repeating backbone of phosphate and ribose units to which nitrogenous bases are attached. RNA is unique among biological macromolecules in that it can encode genetic information, serve as an abundant structural component of cells, and also possesses catalytic activity. (Rieger et al., Glossary of Genetics: Classical and Molecular, 5th ed) (MSH)
http://www.ebi.ac.uk/efo/EFO_0001454
yeast nucleic acid
Jie Zheng
ribonucleic acids
James Malone
Ribonukleinsaeure
A polynucleotide consisting essentially of chains with a repeating backbone of phosphate and ribose units to which nitrogenous bases are attached. RNA is unique among biological macromolecules in that it can encode genetic information, serve as an abundant structural component of cells, and also possesses catalytic activity. (Rieger et al., Glossary of Genetics: Classical and Molecular, 5th ed) (MSH)[accessedResource: NIFSTD:sao1843715402][accessDate: 10-05-2010]
RNA
RNA is a chemical compound which are naturally occurring polyribonucleotides.
ribonucleic acid
pentosenucleic acids
High molecular weight, linear polymers, composed of nucleotides containing ribose and linked by phosphodiester bonds; RNA is central to the synthesis of proteins.
MO_594
http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
NIFSTD:birnlex_174
129S6/SvEvTac
129S6 is a substrain of the mouse strain 129 as described in Jackson Laboratory http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
129S6
Tomasz Adamusiak
James Malone
A population in which a grouping of subjects in some study grouped on the basis of the probable outcome of some disease e.g. by gene expression, by physiological indicators etc
prognostic subgroup
James Malone
Pt45P1
James Malone
Ele Holloway
SKO007
James Malone
Ele Holloway
NCIH2228
James Malone
Ele Holloway
SAEL:63
MA:0000139
FMAID:5034
EMAPA:18248
EHDAA:8677
lymphatic system
James Malone
true
UO:0000006
http://www.ebi.ac.uk/efo/EFO_0001683
A substance unit is a base unit which is a standardised quantity of an element or compound with uniform composition.
A base unit which is a standardized quantity of an element or compound with uniform composition.
substance unit
James Malone
FMAID:7203
excretory canal
AAO:0000250
MAT:0000119
metanephros
EMAPA:17373
SAEL:57
MA:0000368
EV:0100096
1: One of a pair of vertebrate organs situated in the body cavity near the spinal column that excrete waste products of metabolism, in humans are bean-shaped organs about 4 1/2 inches (11 1/2 centimeters) long lying behind the peritoneum in a mass of fatty tissue, and consist chiefly of nephrons by which urine is secreted, collected, and discharged into a main cavity whence it is conveyed by the ureter to the bladder.n2: Any of various excretory organs of invertebrate animals.[accessedResource: BTO:0000671][accessDate: 10-05-2010]
metanephros[accessedResource: MAT:0000119][accessDate: 10-05-2010]
kidney
EHDAA:5911
excretory canal[accessedResource: MAT:0000119][accessDate: 10-05-2010]
1: One of a pair of vertebrate organs situated in the body cavity near the spinal column that excrete waste products of metabolism, in humans are bean-shaped organs about 4 1/2 inches (11 1/2 centimeters) long lying behind the peritoneum in a mass of fatty tissue, and consist chiefly of nephrons by which urine is secreted, collected, and discharged into a main cavity whence it is conveyed by the ureter to the bladder.n2: Any of various excretory organs of invertebrate animals.
WBbt:0005775
James Malone
BTO:0000671
A blood cell especially of an invertebrate animal.
BTO:0000571
hemocyte
CL:0000387
Tomasz Adamusiak
haemocyte
haemocyte[accessedResource: BTO:0000571][accessDate: 10-05-2010]
A blood cell especially of an invertebrate animal.[accessedResource: BTO:0000571][accessDate: 10-05-2010]
Failure of the heart to pump a sufficient amount of blood to meet the needs of the body tissues, resulting in tissue congestion and edema. Signs and symptoms include shortness of breath, pitting edema, enlarged tender liver, engorged neck veins, and pulmonary rales.
Heart Failure[accessedResource: MSH:D006333][accessDate: 10-05-2010]
CCF - Congestive cardiac failure[accessedResource: SNOMEDCT:42343007][accessDate: 10-05-2010]
Failure of the heart to pump a sufficient amount of blood to meet the needs of the body tissues, resulting in tissue congestion and edema. Signs and symptoms include shortness of breath, pitting edema, enlarged tender liver, engorged neck veins, and pulmonary rales.[accessedResource: NCIt:C3080][accessDate: 10-05-2010]
Heart failure involving the RIGHT VENTRICLE.[accessedResource: MSH:D006333][accessDate: 10-05-2010]
NCIt:C3080
GeneRIF:12234945
GeneRIF:12133421
Heart failure involving the RIGHT VENTRICLE.
GeneRIF:12948841
GeneRIF:15458431
GeneRIF:14685701
Congestive heart failure, unspecified
CHF NOS[accessedResource: ICD9:428.0][accessDate: 10-05-2010]
1. inadequacy of the heart so that as a pump it fails to maintain the circulation of blood, with the result that congestion and edema develop in the tissues; SEE ALSO forward heart failure, backward heart failure, right ventricular failure, left ventricular failure. SYN cardiac failure, cardiac insufficiency, congestive heart failure, myocardial insufficiency. 2. resulting clinical syndromes including shortness of breath, pitting edema, enlarged tender liver, engorged neck veins, and pulmonary rales in various combinations.
GeneRIF:15007012
A heterogeneous condition in which the heart is unable to pump out sufficient blood to meet the metabolic need of the body. Heart failure can be caused by structural defects, functional abnormalities (VENTRICULAR DYSFUNCTION), or a sudden overload beyond its capacity. Chronic heart failure is more common than acute heart failure which results from sudden insult to cardiac function, such as MYOCARDIAL INFARCTION.[accessedResource: MSH:D006333][accessDate: 10-05-2010]
GeneRIF:12376296
Myocardial Failure[accessedResource: MSH:D006333][accessDate: 10-05-2010]
Congetive cardiac failure[accessedResource: DOID:395][accessDate: 10-05-2010]
GeneRIF:11972292
GeneRIF:12392981
CCF - Congestive cardiac failure
CHF - Congestive heart failure
A heterogeneous condition in which the heart is unable to pump out sufficient blood to meet the metabolic need of the body. Heart failure can be caused by structural defects, functional abnormalities (VENTRICULAR DYSFUNCTION), or a sudden overload beyond its capacity. Chronic heart failure is more common than acute heart failure which results from sudden insult to cardiac function, such as MYOCARDIAL INFARCTION.
Left Sided Heart Failure[accessedResource: MSH:D006333][accessDate: 10-05-2010]
GeneRIF:12133434
CHF - Congestive heart failure[accessedResource: SNOMEDCT:42343007][accessDate: 10-05-2010]
Heart failure involving the LEFT VENTRICLE.
CHF[accessedResource: DOID:395][accessDate: 10-05-2010]
GeneRIF:15321927
ICD9:428.0
GeneRIF:12967639
Congestive heart disease[accessedResource: SNOMEDCT:42343007][accessDate: 10-05-2010]
Decompensation, Heart[accessedResource: MSH:D006333][accessDate: 10-05-2010]
congestive heart failure
Congestive heart failure, unspecified[accessedResource: ICD9:428.0][accessDate: 10-05-2010]
Myocardial Failure
MSH:D006333
GeneRIF:15475532
Congetive cardiac failure
GeneRIF:12388270
Heart failure caused by dysfunction of the MYOCARDIUM, leading to defective cardiac emptying (contraction) or filling (relaxation).[accessedResource: MSH:D006333][accessDate: 10-05-2010]
Heart failure accompanied by EDEMA, such as swelling of the legs and ankles and congestion in the lungs.
Cardiac Failure
SNOMEDCT:42343007
James Malone
CHF NOS
GeneRIF:12835956
Cardiac Failure Congestive[accessedResource: NCIt:C3080][accessDate: 10-05-2010]
Heart failure caused by dysfunction of the MYOCARDIUM, leading to defective cardiac emptying (contraction) or filling (relaxation).
Heart Decompensation
Congestive cardiac failure
Cardiac Failure[accessedResource: MSH:D006333][accessDate: 10-05-2010]
GeneRIF:15704067
Heart Failure
DOID:395
GeneRIF:12468107
Right-Sided Heart Failure
GeneRIF:15861037
GeneRIF:15319210
GeneRIF:15601581
Heart failure involving the LEFT VENTRICLE.[accessedResource: MSH:D006333][accessDate: 10-05-2010]
Heart failure accompanied by EDEMA, such as swelling of the legs and ankles and congestion in the lungs.[accessedResource: MSH:D006333][accessDate: 10-05-2010]
GeneRIF:14729387
GeneRIF:12364464
Congestive heart failure (disorder)
Heart Failure, Right Sided[accessedResource: MSH:D006333][accessDate: 10-05-2010]
GeneRIF:12610310
GeneRIF:14575298
CHF
GeneRIF:15802562
Congestive heart failure (disorder)[accessedResource: SNOMEDCT:42343007][accessDate: 10-05-2010]
GeneRIF:12135128
GeneRIF:12791592
Heart Failure, Left-Sided
Congestive heart disease
histology
Microscopic morphology of tissues.
morphology
James Malone
1.8
true
obsolete_BY4741
James Malone
Duplicate use EFO_0000099
fibroblast derived cell line
HHV-8[accessedResource: NCIt:C14327][accessDate: 10-05-2010]
Kaposi Sarcoma-Associated Herpes Virus[accessedResource: NCIt:C14327][accessDate: 10-05-2010]
Kaposi Sarcoma Herpes Virus[accessedResource: NCIt:C14327][accessDate: 10-05-2010]
human herpesvirus 8
HHV8
HHV-8
KSHV
Kaposi Sarcoma-Associated Herpes Virus
A gammaherpesvirus that contributes to the development of Kaposi sarcoma.[accessedResource: NCIt:C14327][accessDate: 10-05-2010]
Ele Holloway
A gammaherpesvirus that contributes to the development of Kaposi sarcoma.
Kaposi Sarcoma Herpes Virus
Virus-HHV8
KSHV[accessedResource: NCIt:C14327][accessDate: 10-05-2010]
Tomasz Adamusiak
Virus-HHV8[accessedResource: NCIt:C14327][accessDate: 10-05-2010]
NCIt:C14327
HHV8[accessedResource: NCIt:C14327][accessDate: 10-05-2010]
FBbt:00005515
.
.[accessedResource: FBbt:00005515][accessDate: 10-05-2010]
adult eye primordium
James Malone
The state of being infected such as from the introduction of a foreign agent such as serum, vaccine, antigenic substance or organism.
infection
James Malone
A 1205 lu is a cell line.
A 1205 lu is both something that is bearer of a melanoma, and something that derives from a homo sapiens.
Natural Language Generator 8th April 2010
1205-Lu
James Malone
Ele Holloway
ZFA:0001198
pituitary placode
pituitary placode[accessedResource: ZFA:0001198][accessDate: 10-05-2010]
adenohypophyseal placode
James Malone
A property of a cell which is no longer pluripotent
differentiated
IDOMAL:0000306
The stage of a sporozoan cell that reproduces by schizogony, producing a varied number of daughter trophozoites or merozoites.
A sporozoan cell that reproduces by schizogony, producing a varied number of daughter trophozoites or merozoites.
The stage of a sporozoan cell that reproduces by schizogony, producing a varied number of daughter trophozoites or merozoites.[accessedResource: IDOMAL:0000306][accessDate: 10-05-2010]
erythrocytic schizont
Tomasz Adamusiak
Jie Zheng
http://www.arabidopsis.org/servlets/TairObject?id=1005158803&type=germplasm
CS57779 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158803&type=germplasm
CS57779
James Malone
MO_890
array manufacturer
Tomasz Adamusiak
true
PERSON: James Malone
fm
femtometre
A femtometer is a length unit which is equal to 1m x 10^-15.
femtometer
James Malone
MO_676
James Malone
http://www.ebi.ac.uk/efo/EFO_0002015
A DNA sequencer is an instrument that determines the order of deoxynucleotides in deoxyribonucleic acid sequences.
DNA sequencer
the A. thaliana Ecotype Ler
Jie Zheng
obsolete_ecotype
2.4
A biotype resulting from selection in a particular habitat, e.g. the A. thaliana Ecotype Ler
true
James Malone
using strain instead to hang ecotypes off
MO_71
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158730&type=germplasm
CS57706 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158730&type=germplasm
CS57706
James Malone
Deficiency of vitamin B>12<[accessedResource: SNOMEDCT:190634004][accessDate: 10-05-2010]
Deficiency of vitamin B<sub>12</sub>[accessedResource: SNOMEDCT:190634004][accessDate: 10-05-2010]
DEFIC VITAMIN B12[accessedResource: MSH:D014806][accessDate: 10-05-2010]
Cobalamin deficiency[accessedResource: SNOMEDCT:190634004][accessDate: 10-05-2010]
Vitamin B 12 Deficiency[accessedResource: MSH:D014806][accessDate: 10-05-2010]
Deficiency of vitamin B>12< (disorder)
A nutritional condition produced by a deficiency of VITAMIN B 12 in the diet, characterized by megaloblastic anemia. Since vitamin B 12 is not present in plants, humans have obtained their supply from animal products, from multivitamin supplements in the form of pills, and as additives to food preparations. A wide variety of neuropsychiatric abnormalities is also seen in vitamin B 12 deficiency and appears to be due to an undefined defect involving myelin synthesis. (From Cecil Textbook of Medicine, 19th ed, p848)[accessedResource: MSH:D014806][accessDate: 10-05-2010]
James Malone
VITAMIN B A 12 DEFICIENCY[accessedResource: MSH:D014806][accessDate: 10-05-2010]
Cobalamin deficiency
Deficiency of vitamin B12[accessedResource: SNOMEDCT:190634004][accessDate: 10-05-2010]
Cobalamin deficiency (disorder)[accessedResource: SNOMEDCT:190634004][accessDate: 10-05-2010]
VITAMIN B 12 DEFIC
VITAMIN B A 12 DEFICIENCY
DOID:8459
Deficiencies, Vitamin B12
VITAMIN B 12 DEFIC[accessedResource: MSH:D014806][accessDate: 10-05-2010]
deficiency of vitamin B>12< (disorder)[accessedResource: DOID:8459][accessDate: 10-05-2010]
Deficiency of vitamin B>12<
vitamin B 12 deficiency
A nutritional condition produced by a deficiency of VITAMIN B 12 in the diet, characterized by megaloblastic anemia. Since vitamin B 12 is not present in plants, humans have obtained their supply from animal products, from multivitamin supplements in the form of pills, and as additives to food preparations. A wide variety of neuropsychiatric abnormalities is also seen in vitamin B 12 deficiency and appears to be due to an undefined defect involving myelin synthesis. (From Cecil Textbook of Medicine, 19th ed, p848)
Deficiencies, Vitamin B12[accessedResource: MSH:D014806][accessDate: 10-05-2010]
Deficiency of vitamin B<sub>12</sub>
Cobalamin deficiency (disorder)
VITAMIN B12 DEFIC
vitamin B12 deficiency
Deficiency of vitamin B12
SNOMEDCT:190634004
MSH:D014806
Tiny blood vessels that connect the arterioles with the venules.
A capillary tube; especially: any of the smallest blood vessels connecting arterioles with venules and forming networks throughout the body.[accessedResource: BTO:0002045][accessDate: 10-05-2010]
BTO:0002045
Tiny blood vessels that connect the arterioles with the venules.[accessedResource: NCIt:C12685][accessDate: 10-05-2010]
capillary
James Malone
NCIt:C12685
A capillary tube; especially: any of the smallest blood vessels connecting arterioles with venules and forming networks throughout the body.
The delicate serous membrane that lines each half of the thorax of mammals and is folded back over the surface of the lung of the same side.[accessedResource: BTO:0001791][accessDate: 10-05-2010]
The tissue that lines the wall of the thoracic cavity and the surface of the lungs.
The delicate serous membrane that lines each half of the thorax of mammals and is folded back over the surface of the lung of the same side.
Pleural Tissue
The tissue that lines the wall of the thoracic cavity and the surface of the lungs.[accessedResource: NCIt:C12469][accessDate: 10-05-2010]
Pleural Tissue[accessedResource: NCIt:C12469][accessDate: 10-05-2010]
James Malone
BTO:0001791
pleura
NCIt:C12469
2102ep
2102ep is an embryonal cell line
2102Ep
http://www.arabidopsis.org/servlets/TairObject?id=1005158850&type=germplasm
CS57826 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158850&type=germplasm
CS57826
James Malone
OE19
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158794&type=germplasm
CS57770 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158794&type=germplasm
CS57770
James Malone
U373
James Malone
BJ
BT549
James Malone
MO_223
a compound or solution for treatment.
A description of the method used to deliver e.g. a compound or solution for treatment.
delivery method
Tomasz Adamusiak
Jie Zheng
MAT:0000492
right arm
Right is a geometric modifier describing something which is to the right of the median of an organism or organism part, for example right arm.
right
James Malone
BTO:0000124
PO:0020048
microspore
James Malone
Haploid cells produced by meiosis in the anthers of angiosperms; four microspores are produced from a single microsporocyte.[accessedResource: BTO:0000124][accessDate: 10-05-2010]
MAT:0000215
Haploid cells produced by meiosis in the anthers of angiosperms; four microspores are produced from a single microsporocyte.
FBbt:00005670
embryonic esophageal ganglion
James Malone
FBbt:00005463
crystal cell specific anlage
James Malone
NCIH2081
James Malone
Ele Holloway
C6H3FN2O4
CHEBI:53049
DNFB
InChIKey=LOTKRQAVGJMPNV-UHFFFAOYAZ
2,4-Dinitrofluorobenzene
1-fluoro-2,4-dinitrobenzene
2,4-Dnfb
A fluorobenzene compound with two nitro substituents in the 2- and 4-positions.
1,2,4-Fluorodinitrobenzene
Fluorodinitrobenzene
2,4-Dinitrobenzenefluoride
http://www.ebi.ac.uk/efo/EFO_0002722
[O-][N+](=O)c1ccc(F)c(c1)[N+]([O-])=O
2,4-Dinitro-1-fluorobenzene
Fluoro-2,4-dinitrobenzene
Tomasz Adamusiak
Ele Holloway
FDNB
DFB
InChI=1/C6H3FN2O4/c7-5-2-1-4(8(10)11)3-6(5)9(12)13/h1-3H
Dinitrofluorobenzene
2,4-Dinitrophenyl fluoride
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311984
CS57563 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311984
CS57563
James Malone
obsolete platform because the distinction between instrument and platform is very fuzzy
true
The specific version (such as manufacturer, model, etc.) of a technology that is used to carry out a laboratory or computational experiment.
obsolete_platform
BTO:0000392
plasma cell
A terminally differentiated cell of the B lymphocyte lineage that produces antibodies; plasma cells are oval or round with extensive rough endoplasmic reticulum, a well-developed Golgi apparatus, and a round nucleus having a characteristic cartwheel heterochromatin pattern.
A terminally differentiated cell of the B lymphocyte lineage that produces antibodies; plasma cells are oval or round with extensive rough endoplasmic reticulum, a well-developed Golgi apparatus, and a round nucleus having a characteristic cartwheel heterochromatin pattern.[accessedResource: BTO:0000392][accessDate: 10-05-2010]
plasmocyte[accessedResource: BTO:0000392][accessDate: 10-05-2010]
A terminally differentiated, post-mitotic, antibody secreting cell of the B cell lineage with the phenotype CD138-positive, surface immunonoglobulin-negative, and MHC Class II-negative. Plasma cells are oval or round with extensive rough endoplasmic reticulum, a well-developed Golgi apparatus, and a round nucleus having a characteristic cartwheel heterochromatin pattern and are devoted to producing large amounts of immunoglobulin.
CL:0000786
A terminally differentiated, post-mitotic, antibody secreting cell of the B cell lineage with the phenotype CD138-positive, surface immunonoglobulin-negative, and MHC Class II-negative. Plasma cells are oval or round with extensive rough endoplasmic reticulum, a well-developed Golgi apparatus, and a round nucleus having a characteristic cartwheel heterochromatin pattern and are devoted to producing large amounts of immunoglobulin.[accessedResource: CL:0000786][accessDate: 10-05-2010]
plasmacyte
James Malone
plasmacyte[accessedResource: CL:0000786][accessDate: 10-05-2010]
plasmocyte
abdominal cavity
adult abdomen
Abdominopelvic region[accessedResource: FMAID:9577][accessDate: 10-05-2010]
The third large region of the insect body, which originally comprised twelve segments, each segment is usually formed by a dorsal tergite and a ventral sternite and carries on both sides a spiracle, sometimes, both the dorsal and the ventral plates are further subdivided to give rise to latero-tergites and latero-sternites. In the context of Drosophila refers to the most posterior of the three main tagmata or divisions of the body plan, after the head and the thorax.
abdomen
EV:0100011
The third, posterior division (tagma) of the insect body. In adult mosquitoes, consisting of ten apparent segments.
The most posterior of the three tagma (FBbt:00000002).
The most posterior of the three tagma (FBbt:00000002).[accessedResource: FBbt:00000020][accessDate: 10-05-2010]
Abdominopelvis[accessedResource: FMAID:9577][accessDate: 10-05-2010]
Abdominopelvis
BTO:0000020
SAEL:1
Subdivision of trunk proper, which is demarcated from the thorax internally by the inferior surface of the sternocostal part of the diaphragm and externally by the costal margin, from the back of abdomen by the external surface of the posterior abdominal wall, from the perineum by the superior surface of the urogenital diaphragm and from the lower limbs by the inguinal folds; together with the thorax, and perineum, it constitutes the trunk proper. Examples: There is only one abdomen.
abdominal cavity[accessedResource: BTO:0000020][accessDate: 10-05-2010]
1: The part of the body between the thorax and the pelvis; also: the cavity of this part of the trunk containing the chief viscera.n2: The posterior section of the body behind the thorax in an arthropod.
1: The part of the body between the thorax and the pelvis; also: the cavity of this part of the trunk containing the chief viscera.n2: The posterior section of the body behind the thorax in an arthropod.[accessedResource: BTO:0000020][accessDate: 10-05-2010]
FMAID:9577
adult abdomen[accessedResource: MAT:0000298][accessDate: 10-05-2010]
FBbt:00000020
James Malone
Abdominopelvic region
Subdivision of trunk proper, which is demarcated from the thorax internally by the inferior surface of the sternocostal part of the diaphragm and externally by the costal margin, from the back of abdomen by the external surface of the posterior abdominal wall, from the perineum by the superior surface of the urogenital diaphragm and from the lower limbs by the inguinal folds; together with the thorax, and perineum, it constitutes the trunk proper. Examples: There is only one abdomen.[accessedResource: FMAID:9577][accessDate: 10-05-2010]
MAT:0000298
The third, posterior division (tagma) of the insect body. In adult mosquitoes, consisting of ten apparent segments.[accessedResource: TGMA:0000524][accessDate: 10-05-2010]
TGMA:0000524
SHP77
James Malone
Ele Holloway
uterine sarcoma
NCIH1792
James Malone
Ele Holloway
atopy
1: A slender threadlike outgrowth of the epidermis of an animal; especially: one of the usually pigmented filaments that form the characteristic coat of a mammal.n2: The hairy covering of an animal or a body part; especially: the coating of hairs on a human head.[accessedResource: BTO:0001501][accessDate: 10-05-2010]
FMAID:53667
EMAPA:17529
EV:0100157
MA:0000155
James Malone
vibrissa[accessedResource: MAT:0000160][accessDate: 10-05-2010]
MAT:0000160
EMAPA:18769
vibrissa
hair
BTO:0001501
1: A slender threadlike outgrowth of the epidermis of an animal; especially: one of the usually pigmented filaments that form the characteristic coat of a mammal.n2: The hairy covering of an animal or a body part; especially: the coating of hairs on a human head.
ZFS:0000025
segmentation 10-13 somites
James Malone
true
MO_23
A process in which the act is intended to modify or alter some other material entity,
treatment
Tomasz Adamusiak
Jie Zheng
(3R,4aR,5S,6S,6aS,10S,10aR,10bS)-3-ethenyl-6,10,10b-trihydroxy-3,4a,7,7,10a-pentamethyl-1-oxododecahydro-1H-benzo[f]chromen-5-yl acetate
colforsine
colforsinum
7beta-acetoxy-8,13-epoxy-1alpha,6beta,9alpha-trihydroxylabd-14-en-11-one
A labdane diterpenoid that has formula C22H34O7.
colforsina
InChI=1/C22H34O7/c1-8-19(5)11-14(25)22(27)20(6)13(24)9-10-18(3,4)16(20)15(26)17(28-12(2)23)21(22,7)29-19/h8,13,15-17,24,26-27H,1,9-11H2,2-7H3/t13-,15-,16-,17-,19-,20-,21+,22-/m0/s1
CHEBI:42471
[H][C@@]12[C@H](O)[C@H](OC(C)=O)[C@@]3(C)O[C@](C)(CC(=O)[C@]3(O)[C@@]1(C)[C@@H](O)CCC2(C)C)C=C
colforsin
http://www.ebi.ac.uk/efo/EFO_0001539
forskolin
InChIKey=OHCQJHSOBUTRHG-KGGHGJDLBB
C22H34O7
MO_934
optimization design
Tomasz Adamusiak
Intraepithelial Neoplasia of the Vulva[accessedResource: NCIt:C4756][accessDate: 10-05-2010]
NCIt:C4756
Intraepithelial Neoplasia of Vulva[accessedResource: NCIt:C4756][accessDate: 10-05-2010]
Vulva Intraepithelial Neoplasia
vulvar intraepithelial neoplasia
Dysplasia of Vulva[accessedResource: NCIt:C4756][accessDate: 10-05-2010]
Vulvar Dysplasia
Vulva Intraepithelial Neoplasia[accessedResource: NCIt:C4756][accessDate: 10-05-2010]
Vulval Intraepithelial Neoplasia[accessedResource: NCIt:C4756][accessDate: 10-05-2010]
Dysplasia of the Vulva[accessedResource: NCIt:C4756][accessDate: 10-05-2010]
VIN[accessedResource: NCIt:C4756][accessDate: 10-05-2010]
Intraepithelial Neoplasia of the Vulva
Vulvar Dysplasia[accessedResource: NCIt:C4756][accessDate: 10-05-2010]
Vulval Dysplasia[accessedResource: NCIt:C4756][accessDate: 10-05-2010]
Dysplasia of Vulva
Vulva Dysplasia[accessedResource: NCIt:C4756][accessDate: 10-05-2010]
Vulval Dysplasia
VIN
Vulva Dysplasia
Vulval Intraepithelial Neoplasia
Tomasz Adamusiak
Dysplasia of the Vulva
Intraepithelial Neoplasia of Vulva
Ele Holloway
A caudal ganglionic eminence is a transitory brain structure present in the embryonic and fetal stages of brain development and that is located towards the caudal end.
caudal ganglionic eminence
James Malone
MA:0000319
EV:0100142
FMAID:228659
set of all joints[accessedResource: MAT:0000188][accessDate: 10-05-2010]
James Malone
BTO:0001686
articular joint
TAO:0000367
set of all joints
FBbt:00004645
FMAID:7490
The point of contact between elements of an animal skeleton with the parts that surround and support it.[accessedResource: BTO:0001686][accessDate: 10-05-2010]
XAO:0000171
joint
Anatomical junction which consists of parts of two or more adjacent bones or cartilages which are interconnected by organs and/or organ parts that consist of various types of connective tissue. Together with other joints and bones, a joint constitutes the skeletal system. Examples: pubic symphysis, knee joint, temporomandibular joint.
Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[accessedResource: TAO:0000367][accessDate: 10-05-2010]
articular joint[accessedResource: BTO:0001686][accessDate: 10-05-2010]
Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.
Anatomical junction which consists of parts of two or more adjacent bones or cartilages which are interconnected by organs and/or organ parts that consist of various types of connective tissue. Together with other joints and bones, a joint constitutes the skeletal system. Examples: pubic symphysis, knee joint, temporomandibular joint.[accessedResource: FMAID:7490][accessDate: 10-05-2010]
The point of contact between elements of an animal skeleton with the parts that surround and support it.
MAT:0000188
true
MO_557
genetic factor
Tomasz Adamusiak
Jie Zheng
epiphysis cerebri[accessedResource: BTO:0001067][accessDate: 10-05-2010]
pineal body
Circumventricular organ of neuraxis which is shaped like a pine cone and attached on the midline near the posterior and habenular commissures of the epithalamus.[accessedResource: FMAID:62033][accessDate: 10-05-2010]
MAT:0000448
BTO:0001067
pineal organ
pineal gland
FMAID:62033
MFO:0079940
pineal organ[accessedResource: BTO:0001067][accessDate: 10-05-2010]
XAO:0000160
EV:0100131
A small, cone-shaped organ in the brain of most vertebrates that secretes the hormone melatonin.
Circumventricular organ of neuraxis which is shaped like a pine cone and attached on the midline near the posterior and habenular commissures of the epithalamus.
epiphysis cerebri
pineal body[accessedResource: BTO:0001067][accessDate: 10-05-2010]
A small, cone-shaped organ in the brain of most vertebrates that secretes the hormone melatonin.[accessedResource: BTO:0001067][accessDate: 10-05-2010]
James Malone
MA:0000175
CHEBI:30911
sorbitol
rel-(2R,3R,4R,5S)-hexane-1,2,3,4,5,6-hexol
gulitol
C6H14O6
http://www.ebi.ac.uk/efo/EFO_0001543
glucitol
JEG3
James Malone
Ele Holloway
WIDR
James Malone
Ele Holloway
An assay where chromatin immunoprecipitation (ChIP) is used in combination with SNP microarray technology
ChIP-chip by SNP array
Second segment of circumflex branch of left coronary artery[accessedResource: FMAID:3906][accessDate: 10-05-2010]
Jie Zheng
Second segment of circumflex branch of left coronary artery
Tomasz Adamusiak
Posterior segment of circumflex branch of left coronary artery
FMAID:3906
Posterior segment of circumflex branch of left coronary artery[accessedResource: FMAID:3906][accessDate: 10-05-2010]
distal portion of circumflex branch of left coronary artery
Chorioepithelioma NOS[accessedResource: DOID:3594][accessDate: 10-05-2010]
DOID:3594
An aggressive malignant tumor arising from trophoblastic cells. The vast majority of cases arise in the uterus and represent gestational choriocarcinomas that derive from placental trophoblastic cells. Approximately half of the cases develop from a complete hydatidiform mole. A minority of cases arise in the testis or the ovaries. There is often marked elevation of human chorionic gonadotropin (hCG) in the blood. Choriocarcinomas disseminate rapidly through the hematogenous route; the lungs are most frequently affected.
chorioepithelioma
NCIt:C2948
Chorioepithelioma NOS
An aggressive malignant tumor arising from trophoblastic cells. The vast majority of cases arise in the uterus and represent gestational choriocarcinomas that derive from placental trophoblastic cells. Approximately half of the cases develop from a complete hydatidiform mole. A minority of cases arise in the testis or the ovaries. There is often marked elevation of human chorionic gonadotropin (hCG) in the blood. Choriocarcinomas disseminate rapidly through the hematogenous route; the lungs are most frequently affected.[accessedResource: NCIt:C2948][accessDate: 10-05-2010]
choriocarcinoma
Choriocarcinoma, no ICD-O subtype (morphologic abnormality)
Choriocarcinoma (disorder)
Choriocarcinoma (disorder)[accessedResource: DOID:3594][accessDate: 10-05-2010]
Chorioepithelioma[accessedResource: DOID:3594][accessDate: 10-05-2010]
Choriocarcinoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:3594][accessDate: 10-05-2010]
SCHNEIDER S2 Cell[accessedResource: BTO:0001677][accessDate: 10-05-2010]
Insect - fruitfly (Drosophila melanogaster) cell line, established from the late embryo of a Drosophila melanogaster (fruitfly) in 1972; originally the cells were diploid with 5-10% XY, currently the cell line has only XX cells that are now 60-80% tetraploid.[accessedResource: BTO:0001677][accessDate: 10-05-2010]
S-2 cell
BTO:0001677
Schneider's Line S2 cell
SCHNEIDER-2 cell
James Malone
S2 cell
Schneider's Line S2 cell[accessedResource: BTO:0001677][accessDate: 10-05-2010]
SL2
S2 cell[accessedResource: BTO:0001677][accessDate: 10-05-2010]
S-2 cell[accessedResource: BTO:0001677][accessDate: 10-05-2010]
Insect - fruitfly (Drosophila melanogaster) cell line, established from the late embryo of a Drosophila melanogaster (fruitfly) in 1972; originally the cells were diploid with 5-10% XY, currently the cell line has only XX cells that are now 60-80% tetraploid.
SCHNEIDER S2 Cell
Schneider
S2
SCHNEIDER-2 cell[accessedResource: BTO:0001677][accessDate: 10-05-2010]
CL:0000041
Any fully developed granular leukocyte whose nucleus contains multiple lobes joined by filamentous connections, especially a neutrophil.
mature eosinocyte
mature eosinophil
mature eosinocyte[accessedResource: CL:0000041][accessDate: 10-05-2010]
polymorphonuclear leukocyte
PML
A fully differentiated eosinophil, a granular leukocyte with a nucleus that usually has two lobes connected by one or more slender threads of chromatin, and cytoplasm containing coarse, round granules that are uniform in size and which can be stained by the dye eosin.
James Malone
mature eosinophil leucocyte[accessedResource: CL:0000041][accessDate: 10-05-2010]
BTO:0001026
mature eosinophil leukocyte[accessedResource: CL:0000041][accessDate: 10-05-2010]
polymorphonuclear leucocyte
mature eosinophil leukocyte
mature eosinophil leucocyte
A fully differentiated eosinophil, a granular leukocyte with a nucleus that usually has two lobes connected by one or more slender threads of chromatin, and cytoplasm containing coarse, round granules that are uniform in size and which can be stained by the dye eosin.[accessedResource: CL:0000041][accessDate: 10-05-2010]
PML[accessedResource: BTO:0001026][accessDate: 10-05-2010]
polymorphonuclear leucocyte[accessedResource: CL:0000041][accessDate: 10-05-2010]
mature eosinophil[accessedResource: CL:0000041][accessDate: 10-05-2010]
Any fully developed granular leukocyte whose nucleus contains multiple lobes joined by filamentous connections, especially a neutrophil.[accessedResource: BTO:0001026][accessDate: 10-05-2010]
HP:0002758
EV:0400132
osteoarthritis
James Malone
Ele Holloway
Activity that requires physical or mental exertion, especially when performed to develop or maintain fitness.
exercise
James Malone
GeneRIF:15920728
GeneRIF:15929040
GeneRIF:15050683
GeneRIF:15843584
GeneRIF:14975582
GeneRIF:12146799
GeneRIF:11847479
GeneRIF:11721059
Allergic encephalomyelitis (disorder)[accessedResource: SNOMEDCT:50776006][accessDate: 10-05-2010]
GeneRIF:15778395
GeneRIF:14988414
EXPER AUTOIMMUNE ENCEPH
GeneRIF:14662853
GeneRIF:14662901
ALLERGIC ENCEPH EXPER[accessedResource: MSH:D004681][accessDate: 10-05-2010]
GeneRIF:15837577
Allergic encephalomyelitis[accessedResource: SNOMEDCT:50776006][accessDate: 10-05-2010]
GeneRIF:15100315
GeneRIF:11908949
SNOMEDCT:50776006
Experimental Allergic Encephalomyelitides[accessedResource: MSH:D004681][accessDate: 10-05-2010]
GeneRIF:15925413
GeneRIF:15501390
GeneRIF:14766173
GeneRIF:12196270
GeneRIF:16272284
GeneRIF:12387457
ALLERGIC ENCEPH[accessedResource: MSH:D004681][accessDate: 10-05-2010]
ALLERGIC ENCEPH EXPER
GeneRIF:15265890
Allergic encephalomyelitis (disorder)
Allergic encephalomyelitis
EAE[accessedResource: DOID:3046][accessDate: 10-05-2010]
experimental autoimmune encephalomyelitis
EAE
Experimental allergic encephalomyelitis (disorder)[accessedResource: SNOMEDCT:27040004][accessDate: 10-05-2010]
Experimental allergic encephalomyelitis (disorder)
GeneRIF:15728477
GeneRIF:12538686
GeneRIF:16081797
GeneRIF:12097407
GeneRIF:11985514
GeneRIF:12471147
GeneRIF:16005524
GeneRIF:12925695
GeneRIF:15926914
GeneRIF:11859094
GeneRIF:15081250
GeneRIF:14644025
AUTOIMMUNE EXPER ENCEPH[accessedResource: MSH:D004681][accessDate: 10-05-2010]
GeneRIF:12594253
GeneRIF:12791309
GeneRIF:12799016
GeneRIF:15328042
GeneRIF:14999816
GeneRIF:15494405
An experimental animal model for central nervous system demyelinating disease. Inoculation with a white matter emulsion combined with FREUND'S ADJUVANT, myelin basic protein, or purified central myelin triggers a T cell-mediated immune response directed towards central myelin. The pathologic features are similar to MULTIPLE SCLEROSIS, including perivascular and periventricular foci of inflammation and demyelination. Subpial demyelination underlying meningeal infiltrations also occurs, which is also a feature of ENCEPHALOMYELITIS, ACUTE DISSEMINATED. Passive immunization with T-cells from an afflicted animal to a normal animal also induces this condition. (From Immunol Res 1998;17(1-2):217-27; Raine CS, Textbook of Neuropathology, 2nd ed, p604-5)[accessedResource: MSH:D004681][accessDate: 10-05-2010]
SNOMEDCT:27040004
GeneRIF:15843539
GeneRIF:14507666
GeneRIF:12817031
GeneRIF:12613667
DOID:3046
GeneRIF:16172261
GeneRIF:12429207
GeneRIF:16172262
GeneRIF:15778405
ENCEPH ALLERGIC
GeneRIF:12115610
An experimental animal model for central nervous system demyelinating disease. Inoculation with a white matter emulsion combined with FREUND'S ADJUVANT, myelin basic protein, or purified central myelin triggers a T cell-mediated immune response directed towards central myelin. The pathologic features are similar to MULTIPLE SCLEROSIS, including perivascular and periventricular foci of inflammation and demyelination. Subpial demyelination underlying meningeal infiltrations also occurs, which is also a feature of ENCEPHALOMYELITIS, ACUTE DISSEMINATED. Passive immunization with T-cells from an afflicted animal to a normal animal also induces this condition. (From Immunol Res 1998;17(1-2):217-27; Raine CS, Textbook of Neuropathology, 2nd ed, p604-5)
GeneRIF:12626533
GeneRIF:16049338
GeneRIF:15835266
GeneRIF:14991835
GeneRIF:12486171
GeneRIF:15390104
GeneRIF:15710471
GeneRIF:14634082
GeneRIF:12819359
MSH:D004681
Allergic Encephalomyelitis, Experimental[accessedResource: MSH:D004681][accessDate: 10-05-2010]
GeneRIF:16177127
GeneRIF:11932923
GeneRIF:15850576
GeneRIF:12147621
James Malone
GeneRIF:12960295
GeneRIF:15878627
GeneRIF:15383583
Encephalomyelitis, Experimental Allergic
Experimental Allergic Encephalomyelitides
GeneRIF:16002731
GeneRIF:12372981
GeneRIF:12207354
GeneRIF:11477542
GeneRIF:15383607
GeneRIF:11908941
GeneRIF:15522913
GeneRIF:14688366
keratocyte
James Malone
Ele Holloway
1.8
true
MO_902
obsolete_disease state design
Tomasz Adamusiak
duplication with EFO_0001756
NIFSTD:sao279801585
James Malone
Tomasz Adamusiak
true
A measurement is an information entity that is a recording of the output of a measurement such as produced by an instrument.
Jie Zheng
MO_144
measurement
The part of the alimentary canal derived from the endoderm.[accessedResource: FBbt:00005383][accessDate: 10-05-2010]
The middle part of an alimentary canal.
midgut
FBbt:00005383
BTO:0000863
The part of the alimentary canal derived from the endoderm.
James Malone
The middle part of an alimentary canal.[accessedResource: BTO:0000863][accessDate: 10-05-2010]
fasting
Abstaining from food.[accessedResource: NCIt:C63663][accessDate: 10-05-2010]
Fast
NCIt:C63663
Jie Zheng
Tomasz Adamusiak
Fast[accessedResource: NCIt:C63663][accessDate: 10-05-2010]
Abstaining from food.
TC71
James Malone
Ele Holloway
true
PERSON: James Malone
A dervied mass unit is a derived unit which is a measure of the the amount of matter/energy of a physical object, derived from the base unit for mass.
derived mass unit
James Malone
Extrinsic muscle of eyeball
Any of six small voluntary muscles that pass between the eyeball and the orbit and control the movement of the eyeball in relation to the orbit.
FMA:49033
extraocular muscle
Any of six small voluntary muscles that pass between the eyeball and the orbit and control the movement of the eyeball in relation to the orbit.[accessedResource: BTO:0001579][accessDate: 10-05-2010]
BTO:0001579
Extra-ocular muscle
Extrinsic muscle of eyeball[accessedResource: FMA:49033][accessDate: 10-05-2010]
Extra-ocular muscle[accessedResource: FMA:49033][accessDate: 10-05-2010]
TADS:0000089
A simple epithelial sense organ of an invertebrate (as an insect) usually in the form of a spine, plate, rod, cone, or peg that is composed of one or a few cells with a nerve connection.[accessedResource: BTO:0001237][accessDate: 10-05-2010]
BTO:0001237
seta
TGMA:0000540
MAT:0000163
seta[accessedResource: MAT:0000163][accessDate: 10-05-2010]
a simple sense organ, or one of the structural units of a compound sense organ," and by Schneider as "a specialized area of the integument, consisting of formative cells, the sensory nerve cells, and, in some cases, auxiliary cells
TADS:0000301
A simple epithelial sense organ of an invertebrate (as an insect) usually in the form of a spine, plate, rod, cone, or peg that is composed of one or a few cells with a nerve connection.
sensillum
WBbt:0006929
Defined by Snodgrass as "a simple sense organ, or one of the structural units of a compound sense organ," and by Schneider as "a specialized area of the integument, consisting of formative cells, the sensory nerve cells, and, in some cases, auxiliary cells".[accessedResource: TGMA:0000540][accessDate: 10-05-2010]
James Malone
Defined by Snodgrass as "a simple sense organ, or one of the structural units of a compound sense organ," and by Schneider as "a specialized area of the integument, consisting of formative cells, the sensory nerve cells, and, in some cases, auxiliary cells".
GM06993
James Malone
birnlex_484
NIFSTD:birnlex_484
mouse prenatal
Tomasz Adamusiak
Jie Zheng
InChIKey=KWGKDLIKAYFUFQ-HPRMROJMCO
A lithium salt that has formula ClLi.
lithium chloride
[Li+].[Cl-]
A metal chloride salt with a Li(+) counterion.
CHEBI:48607
Lithiumchlorid
cloruro de litio
lithii chloridum
chlorure de lithium
LiCl
InChI=1/ClH.Li/h1H;/q;+1/p-1/fCl.Li/h1h;/q-1;m
http://www.ebi.ac.uk/efo/EFO_0001567
((4-Chloro-6-((2,3-dimethylphenyl)amino)-2-pyrimidinyl)thio)acetic acid
WY-14,643
An aryl sulfide that has formula C14H14ClN3O2S.
(4-Chloro-6-(2,3-xylidino)-2-pyrimidinylthio)acetic acid
Cc1cccc(Nc2cc(Cl)nc(SCC(O)=O)n2)c1C
({4-chloro-6-[(2,3-dimethylphenyl)amino]pyrimidin-2-yl}sulfanyl)acetic acid
C14H14ClN3O2S
pirinixic acid
InChIKey=SZRPDCCEHVWOJX-YSFRZULJCA
http://www.ebi.ac.uk/efo/EFO_0001593
InChI=1/C14H14ClN3O2S/c1-8-4-3-5-10(9(8)2)16-12-6-11(15)17-14(18-12)21-7-13(19)20/h3-6H,7H2,1-2H3,(H,19,20)(H,16,17,18)/f/h16,19H
CHEBI:32509
birn_anat:birnlex_1706
preoptic area
Tomasz Adamusiak
Jie Zheng
A temperature derived unit which is equal to 5/9ths of a kelvin. Negative 40 degrees Fahrenheit is equal to negative 40 degrees Celsius.
Tomasz Adamusiak
MO_812
F
Jie Zheng
true
degree fahrenheit
http://www.ebi.ac.uk/efo/EFO_0001701
James Malone
1.8
true
temp holding class to be placed as hierarchy is restructured
obsolete_temp bin organism part
James Malone
temporary place holder class, no longer needed
http://www.arabidopsis.org/servlets/TairObject?id=1005158725&type=germplasm
CS57701 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158725&type=germplasm
CS57701
James Malone
estrogen
NIFSTD:nifext_5156
estrogenos
[accessedResource: NIFSTD:nifext_5156][accessDate: 10-05-2010]
http://www.ebi.ac.uk/efo/EFO_0001530
estrogenes Hormon
estrogenes
James Malone
estrogens
oestrogenes
Oestrogene
Tomasz Adamusiak
estrogene
oestrogens
A steroid hormone that stimulates or controls the development and maintenance of female sex characteristics in mammals by binding to oestrogen receptors. The oestrogens are named for their importance in the oestrous cycle.
Oestrogen
estrogeno
pancreatic cell
GM11829
James Malone
James Malone
(7E,9E,11E,13Z)-retinoic acid
Neovitamin A acid
isotretinoin
Accutane
InChIKey=SHGAZHPCJJPHSC-WWZGNHTLDJ
CC1=C(\\C=C\\C(C)=C\\C=C\\C(C)=C/C(O)=O)C(C)(C)CCC1
13-cis-Vitamin A acid
http://www.ebi.ac.uk/efo/EFO_0002411
isotretinoino
13-RA
A retinoic acid that has formula C20H28O2.
Amnesteem
isotretinoinum
InChI=1/C20H28O2/c1-15(8-6-9-16(2)14-19(21)22)11-12-18-17(3)10-7-13-20(18,4)5/h6,8-9,11-12,14H,7,10,13H2,1-5H3,(H,21,22)/b9-6+,12-11+,15-8+,16-14-/f/h21H
Claravis
CHEBI:6067
13-cis-retinoic acid
Ele Holloway
C20H28O2
(2Z,4E6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraenoic acid
isotretinoine
James Malone
http://www.ebi.ac.uk/efo/EFO_0001676
An androstanoid having 17beta-hydroxy and 3-oxo groups, together with unsaturation at C-4-C-5.
[H][C@@]12CCC3=CC(=O)CC[C@]3(C)[C@@]1([H])CC[C@]1(C)[C@@H](O)CC[C@@]21[H]
4-androsten-17beta-ol-3-one
Testosteron
C19H28O2
testosteronum
Androderm
testosterona
testosterone
InChIKey=MUMGGOZAMZWBJJ-DYKIIFRCBC
(8alpha,10alpha,13alpha,14beta,17alpha)-17-hydroxyandrost-4-en-3-one
17beta-hydroxyandrost-4-en-3-one
17beta-hydroxy-4-androsten-3-one
InChI=1/C19H28O2/c1-18-9-7-13(20)11-12(18)3-4-14-15-5-6-17(21)19(15,2)10-8-16(14)18/h11,14-17,21H,3-10H2,1-2H3/t14-,15-,16-,17-,18-,19-/m0/s1
CHEBI:17347
An androgen that has formula C19H28O2.
carbon(II) oxide
A carbon oxide that has formula CO.
James Malone
[C-]#[O+]
carbon monooxide
InChIKey=UGFAIRIUMAVXCW-UHFFFAOYAT
http://www.ebi.ac.uk/efo/EFO_0001500
InChI=1/CO/c1-2
CHEBI:17245
carbon monoxide
Publication submitted to a journal for publication.
submitted
Tomasz Adamusiak
Ele Holloway
HCT-8
James Malone
HCT8
"Praepharynx"[accessedResource: TGMA:0000132][accessDate: 10-05-2010]
The part of the vertebrate alimentary canal between the cavity of the mouth and the esophagus.nThe pharynx of Nematodes is an efficient pump and forces food into the intestines.[accessedResource: BTO:0001049][accessDate: 10-05-2010]
TGMA:0000132
pharynx
"pump"
FMAID:46688
pharynx structure
MFO:0003080
Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills. Kimmel et al, 1995.[accessedResource: TAO:0000056][accessDate: 10-05-2010]
FBbt:00005380
EHDAA:2947
"oesophagus"
"posterior pharynx"[accessedResource: TGMA:0000132][accessDate: 10-05-2010]
"pharyngeal valve"
"antlia"
EV:0100065
"posterior pharynx"
"Postpharynx"[accessedResource: TGMA:0000132][accessDate: 10-05-2010]
"Pumporgan"[accessedResource: TGMA:0000132][accessDate: 10-05-2010]
"pumping organ"
The part of the vertebrate alimentary canal between the cavity of the mouth and the esophagus.nThe pharynx of Nematodes is an efficient pump and forces food into the intestines.
"pumping organ"[accessedResource: TGMA:0000132][accessDate: 10-05-2010]
"antlia"[accessedResource: TGMA:0000132][accessDate: 10-05-2010]
"anterior pharynx"[accessedResource: TGMA:0000132][accessDate: 10-05-2010]
The part of the stomodeum between the mouth and the oesophagus.[accessedResource: TGMA:0000132][accessDate: 10-05-2010]
"Praepharynx"
TADS:0000042
"post-pharynx"
James Malone
The part of the stomodeum between the mouth and the oesophagus.
adult pharynx[accessedResource: TGMA:0000132][accessDate: 10-05-2010]
"oesophagus"[accessedResource: TGMA:0000132][accessDate: 10-05-2010]
"Postpharynx"
WBbt:0003681
SAEL:82
"pharyngeal valve"[accessedResource: TGMA:0000132][accessDate: 10-05-2010]
"muscular dilation of the oesophagus"
MA:0000432
"post-pharynx"[accessedResource: TGMA:0000132][accessDate: 10-05-2010]
"muscular dilation of the oesophagus"[accessedResource: TGMA:0000132][accessDate: 10-05-2010]
Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills. Kimmel et al, 1995.
"pump"[accessedResource: TGMA:0000132][accessDate: 10-05-2010]
EMAPA:16706
"Pumporgan"
TAO:0000056
"anterior pharynx"
MAT:0000049
BTO:0001049
adult pharynx
James Malone
InChIKey=OGWKCGZFUXNPDA-XQKSVPLYBW
22-Oxovincaleukoblastine
InChI=1/C46H56N4O10/c1-7-42(55)22-28-23-45(40(53)58-5,36-30(14-18-48(24-28)25-42)29-12-9-10-13-33(29)47-36)32-20-31-34(21-35(32)57-4)50(26-51)38-44(31)16-19-49-17-11-15-43(8-2,37(44)49)39(60-27(3)52)46(38,56)41(54)59-6/h9-13,15,20-21,26,28,37-39,47,55-56H,7-8,14,16-19,22-25H2,1-6H3/t28-,37+,38-,39-,42+,43-,44-,45+,46+/m1/s1
CHEBI:28445
http://www.ebi.ac.uk/efo/EFO_0002421
A vinca alkaloid that has formula C46H56N4O10.
vincristine
Ele Holloway
C46H56N4O10
[H][C@@]12N3CC[C@@]11c4cc(c(OC)cc4N(C=O)[C@@]1([H])[C@](O)([C@H](OC(C)=O)[C@]2(CC)C=CC3)C(=O)OC)[C@]1(C[C@@H]2C[N@](CCc3c1[nH]c1ccccc31)C[C@](O)(CC)C2)C(=O)OC
leurocristine
Tomasz Adamusiak
James Malone
Mole NOS[accessedResource: DOID:2681][accessDate: 10-05-2010]
nevus
nevus (disorder)
skin mole, NOS
Mole of skin[accessedResource: DOID:2681][accessDate: 10-05-2010]
nevus (disorder)[accessedResource: DOID:2681][accessDate: 10-05-2010]
Mole of skin
nevus, NOS
Mole NOS
DOID:2681
skin mole, NOS[accessedResource: DOID:2681][accessDate: 10-05-2010]
nevus, NOS[accessedResource: DOID:2681][accessDate: 10-05-2010]
SAEL:37
FBbt:00003214
James Malone
A cell, group of cells, or organ of endothelial origin that selectively removes materials from the blood, concentrates or alters them, and secretes them for further use in the body or for elimination from the body.[accessedResource: BTO:0000522][accessDate: 10-05-2010]
BTO:0000522
XAO:0000158
TAO:0001158
MA:0002564
MA:0002563
SAEL:33
A cell, group of cells, or organ of endothelial origin that selectively removes materials from the blood, concentrates or alters them, and secretes them for further use in the body or for elimination from the body.
gland
http://www.arabidopsis.org/servlets/TairObject?id=1005158653&type=germplasm
CS57629 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158653&type=germplasm
CS57629
James Malone
NALM1
James Malone
Ele Holloway
A172
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158716&type=germplasm
CS57692 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158716&type=germplasm
CS57692
James Malone
The rapidly proliferating mass of cells at the caudal extremity of the embryo; remnant of the primitive node.[accessedResource: BTO:0001445][accessDate: 10-05-2010]
tailbud
end bud
tailbud[accessedResource: BTO:0001445][accessDate: 10-05-2010]
Jie Zheng
end bud[accessedResource: BTO:0001445][accessDate: 10-05-2010]
The rapidly proliferating mass of cells at the caudal extremity of the embryo; remnant of the primitive node.
Tomasz Adamusiak
tail bud
BTO:0001445
adrenergic antagonists
adrenergic blockers
James Malone
http://www.ebi.ac.uk/efo/EFO_0001862
adrenergic blockaders
adrenergic blocker
adrenoceptor antagonists
An agent that binds to but does not activate adrenergic receptors thereby blocking the actions of endogenous or exogenous adrenergic agonists.
CHEBI:37887
adrenergic receptor blockaders
adrenergic antagonist
R28
James Malone
RKO
James Malone
Natural Language Generator 8th April 2010
James Malone
ARH77
An arh77 is a cell line.
An arh77 is both something that is bearer of a plasma cell neoplasm, and something that derives from a lymphatic system.
Ele Holloway
KELLY
A KELLY is a cell line.
A KELLY is all of the following: something that is bearer of a neuroblastoma, something that derives from a Homo sapiens, and something that derives from a brain.
Natural Language Generator 8th April 2010
James Malone
Ele Holloway
James Malone
Central Nervous System Disease[accessedResource: NCIt:C2934][accessDate: 10-05-2010]
Central Nervous System Disorder[accessedResource: NCIt:C2934][accessDate: 10-05-2010]
nervous system disease
Central Nervous System Disease
Central Nervous System Disorder
NCIt:C2934
K562
A K562 is a cell line.
A K562 is bearer of a chronic myelogenous leukemia.
Natural Language Generator 8th April 2010
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158615&type=germplasm
CS57591 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158615&type=germplasm
CS57591
James Malone
CHEBI:17234
gluco-hexose
Glukose
Glc
C6H12O6
http://www.ebi.ac.uk/efo/EFO_0001545
glucose
CHEBI:5417
C6H13NO5
2-Amino-2-deoxy-glucose
http://www.ebi.ac.uk/efo/EFO_0001544
glucosamine
Glucosamin
GlcN
Glukosamin
A glycosyl glycoside that has formula C12H22O11.
sucrose
InChI=1/C12H22O11/c13-1-4-6(16)8(18)9(19)11(21-4)23-12(3-15)10(20)7(17)5(2-14)22-12/h4-11,13-20H,1-3H2/t4-,5-,6-,7-,8+,9-,10+,11-,12+/m1/s1
beta-D-Fruf-(2<->1)-alpha-D-Glcp
C12H22O11
beta-D-fructofuranosyl alpha-D-glucopyranoside
Sacharose
sacarosa
Saccharose
Cane sugar
table sugar
OC[C@H]1O[C@H](O[C@]2(CO)O[C@H](CO)[C@@H](O)[C@@H]2O)[C@H](O)[C@@H](O)[C@@H]1O
1-alpha-D-Glucopyranosyl-2-beta-D-fructofuranoside
CHEBI:17992
InChIKey=CZMRCDWAGMRECN-UGDNZRGBBE
http://www.ebi.ac.uk/efo/EFO_0001616
http://www.arabidopsis.org/servlets/TairObject?id=1005158764&type=germplasm
CS57740 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158764&type=germplasm
CS57740
James Malone
Follicular adenocarcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:5257006][accessDate: 10-05-2010]
Thyroid Gland Adenocarcinoma
Follicular Carcinoma of Thyroid Gland
Follicular thyroid carcinoma (disorder)[accessedResource: SNOMEDCT:255028004][accessDate: 10-05-2010]
Follicular thyroid carcinoma (disorder)
Well-Differentiated Follicular Adenocarcinoma[accessedResource: NCIt:C8054][accessDate: 10-05-2010]
Adenocarcinomas, Follicular
Follicular Cancer of the Thyroid
James Malone
follicular thyroid carcinoma
Thyroid Adenocarcinoma
Follicular Carcinoma of Thyroid
Follicular carcinoma, well differentiated
Follicular Cancer of the Thyroid Gland
FTC - Follicular thyroid carcinoma[accessedResource: SNOMEDCT:255028004][accessDate: 10-05-2010]
SNOMEDCT:28173006
follicular thyroid cancer
MSH:D018263
Follicular carcinoma[accessedResource: SNOMEDCT:5257006][accessDate: 10-05-2010]
Follicular Cancer of Thyroid
NCIt:C27380
Follicular adenocarcinoma, well differentiated (morphologic abnormality)[accessedResource: SNOMEDCT:28173006][accessDate: 10-05-2010]
[M]Follicular carcinoma[accessedResource: SNOMEDCT:189642005][accessDate: 10-05-2010]
SNOMEDCT:255028004
An adenocarcinoma arising from the follicular cells of the thyroid gland. According to the degree of differentiation, it is classified either as differentiated carcinoma (extensive evidence of follicular cell differentiation), or poorly differentiated carcinoma (limited evidence of follicular cell differentiation). (NCI05)[accessedResource: NCIt:C27380][accessDate: 10-05-2010]
Follicular Thyroid Cancer[accessedResource: NCIt:C8054][accessDate: 10-05-2010]
Follicular carcinoma, NOS
NCIt:C8054
Follicular carcinoma
Thyroid Gland Adenocarcinoma[accessedResource: NCIt:C27380][accessDate: 10-05-2010]
Follicular carcinoma of the Thyroid gland
A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. The nuclear features which characterise the thyroid gland papillary carcinoma are absent. It is linked to radiation and comprises approximately 10% to 15% of thyroid cancers. Clinically, it usually presents as a solitary mass in the thyroid gland. It is generally unifocal and thickly encapsulated and shows invasion of the capsule or the vessels. Diagnostic procedures include: thyroid function tests, thyroid radioisotope scanning, thyroid ultrasound and fine needle biopsy. Treatment options include: partial or complete thyroidectomy. Adjuvant treatment options include: radioiodine therapy, TSH suppression and external radiation.
Follicular Cancer of Thyroid[accessedResource: NCIt:C8054][accessDate: 10-05-2010]
Follicular carcinoma, NOS[accessedResource: SNOMEDCT:5257006][accessDate: 10-05-2010]
Adenocarcinomas, Follicular[accessedResource: MSH:D018263][accessDate: 10-05-2010]
GeneRIF:14568171
SNOMEDCT:189642005
[M]Follicular carcinoma
Follicular Adenocarcinoma[accessedResource: NCIt:C8054][accessDate: 10-05-2010]
FTC - Follicular thyroid carcinoma
Follicular carcinoma - well differentiated[accessedResource: SNOMEDCT:28173006][accessDate: 10-05-2010]
Thyroid Gland Follicular Carcinoma[accessedResource: NCIt:C8054][accessDate: 10-05-2010]
Well-Differentiated Follicular Adenocarcinoma
Follicular adenocarcinoma, NOS[accessedResource: SNOMEDCT:5257006][accessDate: 10-05-2010]
Follicular adenocarcinoma, well differentiated (morphologic abnormality)
Follicular Cancer of the Thyroid Gland[accessedResource: NCIt:C8054][accessDate: 10-05-2010]
Follicular Carcinoma of Thyroid[accessedResource: NCIt:C8054][accessDate: 10-05-2010]
[M]Follicular adenocarcinoma NOS
Follicular Carcinoma of the Thyroid Gland[accessedResource: NCIt:C8054][accessDate: 10-05-2010]
[M]Follicular adenocarcinoma NOS[accessedResource: SNOMEDCT:189642005][accessDate: 10-05-2010]
DOID:3962
Follicular Carcinoma of Thyroid Gland[accessedResource: NCIt:C8054][accessDate: 10-05-2010]
Follicular Cancer of Thyroid Gland[accessedResource: NCIt:C8054][accessDate: 10-05-2010]
Follicular adenocarcinoma (morphologic abnormality)
An adenocarcinoma arising from the follicular cells of the thyroid gland. According to the degree of differentiation, it is classified either as differentiated carcinoma (extensive evidence of follicular cell differentiation), or poorly differentiated carcinoma (limited evidence of follicular cell differentiation). (NCI05)
Thyroid adenocarcinoma[accessedResource: DOID:3962][accessDate: 10-05-2010]
An adenocarcinoma of the thyroid gland, in which the cells are arranged in the form of follicles. (From Dorland, 27th ed)
A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. The nuclear features which characterise the thyroid gland papillary carcinoma are absent. It is linked to radiation and comprises approximately 10% to 15% of thyroid cancers. Clinically, it usually presents as a solitary mass in the thyroid gland. It is generally unifocal and thickly encapsulated and shows invasion of the capsule or the vessels. Diagnostic procedures include: thyroid function tests, thyroid radioisotope scanning, thyroid ultrasound and fine needle biopsy. Treatment options include: partial or complete thyroidectomy. Adjuvant treatment options include: radioiodine therapy, TSH suppression and external radiation.[accessedResource: NCIt:C8054][accessDate: 10-05-2010]
[M]Follicular adenocarcinoma NOS (morphologic abnormality)
[M]Follicular adenocarcinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189642005][accessDate: 10-05-2010]
Follicular Adenocarcinoma
Follicular Cancer of Thyroid Gland
GeneRIF:14666683
SNOMEDCT:5257006
Follicular Carcinoma of the Thyroid
Follicular Carcinoma of the Thyroid[accessedResource: NCIt:C8054][accessDate: 10-05-2010]
Thyroid Gland Follicular Carcinoma
Follicular Cancer of the Thyroid[accessedResource: NCIt:C8054][accessDate: 10-05-2010]
An adenocarcinoma of the thyroid gland, in which the cells are arranged in the form of follicles. (From Dorland, 27th ed)[accessedResource: MSH:D018263][accessDate: 10-05-2010]
Follicular adenocarcinoma, NOS
http://www.arabidopsis.org/servlets/TairObject?id=1005158695&type=germplasm
CS57671 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158695&type=germplasm
CS57671
James Malone
MS589
James Malone
Ele Holloway
distal renal arthery
Tomasz Adamusiak
Jie Zheng
James Malone
HCC1500
Lymphoma, African[accessedResource: MSH:D002051][accessDate: 10-05-2010]
malignant lymphoma, Burkitt's type
Burkitt's tumor NOS (morphologic abnormality)[accessedResource: DOID:8584][accessDate: 10-05-2010]
James Malone
Burkitt's lymphoma - disorder[accessedResource: DOID:8584][accessDate: 10-05-2010]
Lymphoma, Burkitt[accessedResource: MSH:D002051][accessDate: 10-05-2010]
Burkitt's tumor NOS (morphologic abnormality)
GeneRIF:15728515
Leukemia, L3 Lymphocytic[accessedResource: MSH:D002051][accessDate: 10-05-2010]
Burkitt's tumor
Leukemia, Lymphoblastic, Burkitt-Type
L3 Lymphocytic Leukemias
Burkitt's tumor[accessedResource: DOID:8584][accessDate: 10-05-2010]
small Non-Cleaved cell Lymphoma, Burkitt's type[accessedResource: DOID:8584][accessDate: 10-05-2010]
GeneRIF:12604406
Burkitt's lymphoma - disorder
Burkitt's tumour [obs]
Burkitts Leukemia[accessedResource: MSH:D002051][accessDate: 10-05-2010]
GeneRIF:16169462
Tumor, Burkitt
Burkitt lymphoma/leukaemia[accessedResource: DOID:8584][accessDate: 10-05-2010]
Leukemia, Burkitt
Leukemia, Burkitt's
Burkitts Leukemia
Cell Leukemia, Burkitt[accessedResource: MSH:D002051][accessDate: 10-05-2010]
African Lymphoma
DOID:8584
Leukemia, Burkitt[accessedResource: MSH:D002051][accessDate: 10-05-2010]
GeneRIF:15520469
A form of undifferentiated malignant LYMPHOMA usually found in central Africa, but also reported in other parts of the world. It is commonly manifested as a large osteolytic lesion in the jaw or as an abdominal mass. B-cell antigens are expressed on the immature cells that make up the tumor in virtually all cases of Burkitt lymphoma. The Epstein-Barr virus (HERPESVIRUS 4, HUMAN) has been isolated from Burkitt lymphoma cases in Africa and it is implicated as the causative agent in these cases; however, most non-African cases are EBV-negative.
GeneRIF:14697225
ICD9:200.2
Leukemia, Lymphocytic, L3
Burkitts Lymphoma[accessedResource: MSH:D002051][accessDate: 10-05-2010]
GeneRIF:15498855
Burkitt's tumor or lymphoma[accessedResource: DOID:8584][accessDate: 10-05-2010]
GeneRIF:14707079
GeneRIF:12410315
Burkitts lymphoma
GeneRIF:11964311
A form of undifferentiated malignant LYMPHOMA usually found in central Africa, but also reported in other parts of the world. It is commonly manifested as a large osteolytic lesion in the jaw or as an abdominal mass. B-cell antigens are expressed on the immature cells that make up the tumor in virtually all cases of Burkitt lymphoma. The Epstein-Barr virus (HERPESVIRUS 4, HUMAN) has been isolated from Burkitt lymphoma cases in Africa and it is implicated as the causative agent in these cases; however, most non-African cases are EBV-negative.[accessedResource: MSH:D002051][accessDate: 10-05-2010]
GeneRIF:12672960
GeneRIF:15940251
GeneRIF:11783945
Leukemia, Burkitt's[accessedResource: MSH:D002051][accessDate: 10-05-2010]
GeneRIF:15061213
Burkitt's lymphoma NOS (disorder)[accessedResource: DOID:8584][accessDate: 10-05-2010]
Burkitt's lymphoma NOS (disorder)
Burkitts Lymphoma
GeneRIF:15384174
small Non-Cleaved cell Lymphoma, Burkitt's type
Tumor, Burkitt[accessedResource: MSH:D002051][accessDate: 10-05-2010]
Burkitt Lymphoma
GeneRIF:12594826
Burkitt's tumour [obs][accessedResource: DOID:8584][accessDate: 10-05-2010]
GeneRIF:12808131
Burkitt's tumors (morphologic abnormality)[accessedResource: DOID:8584][accessDate: 10-05-2010]
Burkitt's lymphoma of unspecified site (disorder)[accessedResource: DOID:8584][accessDate: 10-05-2010]
MSH:D002051
Burkitt lymphoma/leukaemia
malignant lymphoma, Burkitt's type[accessedResource: DOID:8584][accessDate: 10-05-2010]
GeneRIF:11869962
GeneRIF:11443860
Burkitt's tumor or lymphoma
GeneRIF:14980076
Burkitt's lymphoma of unspecified site (disorder)
Leukemias, L3 Lymphocytic[accessedResource: MSH:D002051][accessDate: 10-05-2010]
Burkitt's tumors (morphologic abnormality)
Leukemia, Lymphoblastic, Burkitt-Type[accessedResource: MSH:D002051][accessDate: 10-05-2010]
Burkitt Cell Leukemia
GeneRIF:12070030
NCIt:C3113
James Malone
An abnormal increase in the number of cells in an organ or a tissue with consequent enlargement.[accessedResource: NCIt:C3113][accessDate: 10-05-2010]
Tomasz Adamusiak
Hyperplastic
Hyperplastic[accessedResource: NCIt:C3113][accessDate: 10-05-2010]
An abnormal increase in the number of cells in an organ or a tissue with consequent enlargement.
An abnormal increase in the number of (otherwise normal) cells in an organ or a tissue with consequent enlargement.
hyperplasia
D-(-)-2,2-dichloro-N-(beta-hydroxy-alpha-(hydroxymethyl)-p-nitrophenylethyl)acetamide
C11H12Cl2N2O5
Chlorocol
chloramphenicolum
levomicetina
http://www.ebi.ac.uk/efo/EFO_0002403
2,2-dichloro-N-[(1R,2R)-2-hydroxy-1-(hydroxymethyl)-2-(4-nitrophenyl)ethyl]acetamide
James Malone
CHEBI:17698
Sificetina
A dichloro-substituted acetamide containing a nitrobenzene ring, an amide bond and an alcohol function.
Halomycetin
Oleomycetin
InChI=1/C11H12Cl2N2O5/c12-10(13)11(18)14-8(5-16)9(17)6-1-3-7(4-2-6)15(19)20/h1-4,8-10,16-17H,5H2,(H,14,18)/t8-,9-/m1/s1/f/h14H
Chloromycetin
Chlorocid
Globenicol
Ele Holloway
chloramphenicol
OC[C@@H](NC(=O)C(Cl)Cl)[C@H](O)c1ccc(cc1)N(=O)=O
Chloramex
laevomycetinum
Fenicol
InChIKey=WIIZWVCIJKGZOK-TUYINDPHDP
levomycetin
D-(-)-threo-1-p-nitrophenyl-2-dichloroacetylamino-1,3-propanediol
cloramfenicol
MCCAR
James Malone
Ele Holloway
MO_471
The process of marking a material in some way for experimental purposes. E.g. the labelling of a nucleic acid with biotin in a microarray experiment
labelling
Tomasz Adamusiak
Jie Zheng
James Malone
COLO320DM
James Malone
Ele Holloway
growth hormones
Wachstumshormon
http://www.ebi.ac.uk/efo/EFO_0001548
A hormone that specifically regulates growth.
growth hormone
MAT:0000518
plant developmental tissue
James Malone
true
UO:0000033
http://www.ebi.ac.uk/efo/EFO_0001789
A time unit which is equal to 24 hours.
A day is a derived time unit which is equal to 24 hours.
day
James Malone
ZEA:0015085
PO:0020136
male inflorescence
James Malone
BTO:0000887
A body tissue consisting of long cells that contract when stimulated and produce motion.
A body tissue consisting of long cells that contract when stimulated and produce motion.[accessedResource: BTO:0000887][accessDate: 10-05-2010]
muscle
James Malone
HT1080
James Malone
Ele Holloway
YCC7
James Malone
Ele Holloway
BCKN-1
James Malone
Ele Holloway
WBbt:0005178
MAT:0000165
hermaphrodite gonad
OntologyMappingImporter following MAT:0000165
James Malone
http://www.ebi.ac.uk/efo/EFO_0001826
CHEBI:24937
jasmonic acids
James Malone
JAX:000654
CBA/CaJ is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/000654.html
CBA/CaJ
James Malone
C3042
A poorly circumscribed neoplasm arising from the soft tissues. It is characterized by the presence of spindle-shaped fibroblasts and an infiltrative growth pattern.
A poorly circumscribed neoplasm arising from the soft tissues. It is characterized by the presence of spindle-shaped fibroblasts and an infiltrative growth pattern.[accessedResource: C3042][accessDate: 10-05-2010]
fibromatosis
James Malone
camptothecin
C20H16N2O4
InChIKey=VSJKWCGYPAHWDS-FQEVSTJZBY
(4S)-4-ethyl-4-hydroxy-1H-pyrano[3',4':6,7]indolizino[1,2-b]quinoline-3,14(4H,12H)-dione
20(S)-camptothecine
(+)-camptothecine
CC[C@@]1(O)C(=O)OCc2c1cc1-c3nc4ccccc4cc3Cn1c2=O
A pyranoindolizinoquinoline that has formula C20H16N2O4.
(S)-(+)-camptothecin
InChI=1/C20H16N2O4/c1-2-20(25)14-8-16-17-12(7-11-5-3-4-6-15(11)21-17)9-22(16)18(23)13(14)10-26-19(20)24/h3-8,25H,2,9-10H2,1H3/t20-/m0/s1
D-camptothecin
http://www.ebi.ac.uk/efo/EFO_0001498
James Malone
CHEBI:27656
CPT
21,22-Secocamptothecin-21-oic acid lactone
A LY2 is a cell line.
A LY2 is all of the following: something that is bearer of a breast carcinoma, something that derives from an
epithelial cell, and something that derives from a mammary gland.
James Malone
Natural Language Generator 8th April 2010
LY2
PMID:9844629
IR(lox/lox) transfection mouse strain maintained on a mixed (C57BL/6 x 129/Sv) genetic background.
IR (lox/lox)
Tomasz Adamusiak
Jie Zheng
true
ArrayExpress Production Team
RNA-sequencing
An assay in which sequencing technology (e.g. Solexa/454) is used to generate RNA sequence, analyse the transcibed regions of the genome, and or to quantitate transcript abundance
obsolete_RNA-seq
http://www.ebi.ac.uk/efo/EFO_0001603
retinoic acid
CHEBI:26536
InChI=1/C20H28O2/c1-15(8-6-9-16(2)14-19(21)22)11-12-18-17(3)10-7-13-20(18,4)5/h6,8-9,11-12,14H,7,10,13H2,1-5H3,(H,21,22)/f/h21H
CC(C=CC1=C(C)CCCC1(C)C)=CC=CC(C)=CC(O)=O
InChIKey=SHGAZHPCJJPHSC-PKSOQXRJCZ
C20H28O2
3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraenoic acid
A retinoid that has formula C20H28O2.
1.5
The lower part of the pharynx that connects to the esophagus.
Obsolete - duplication use laryngopharynx EFO_0001388 instead
pars laryngea pharyngis
pars laryngea pharyngis[accessedResource: BTO:0001740][accessDate: 10-05-2010]
true
laryngopharynx
hypopharynx[accessedResource: BTO:0001740][accessDate: 10-05-2010]
BTO:0001740
James Malone
obsolete_hypopharynx
NCIt:C12246
The lower part of the pharynx that connects to the esophagus.[accessedResource: NCIt:C12246][accessDate: 10-05-2010]
hypopharynx
The hypopharynx is part of the pharynx that lies below the upper edge of the epiglottis and opens into the larynx and esophagus.
The portion of the pharynx that lies below the upper edge of the epiglottis and opens into the larynx and esophagus.
The portion of the pharynx that lies below the upper edge of the epiglottis and opens into the larynx and esophagus.[accessedResource: BTO:0001740][accessDate: 10-05-2010]
laryngopharynx[accessedResource: BTO:0001740][accessDate: 10-05-2010]
NCIt:C32365
conjunctival epithelium
James Malone
1.8
true
Strain or line specific to virus
obsolete_virus strain
James Malone
embryonic day 17.5
Tomasz Adamusiak
Jie Zheng
Spinal column[accessedResource: FMAID:13478][accessDate: 10-05-2010]
postcranial axial skeleton
EMAPA:17214
SAEL:121
NIFSTD:sao1145756102
The post-cranial structural components forming the long axis of the vertebrate body; usually consists of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.
The post-cranial structural components forming the long axis of the vertebrate body; usually consists of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.[accessedResource: TAO:0000317][accessDate: 10-05-2010]
TAO:0000317
Vertebral column[accessedResource: FMAID:13478][accessDate: 10-05-2010]
ZFA:0000317
Tomasz Adamusiak
Spinal column
vertebral column
The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.[accessedResource: ZFA:0000317][accessDate: 10-05-2010]
FMAID:13478
The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.
James Malone
AAO:0000034
vertebral column structure
postcranial axial skeleton[accessedResource: TAO:0000317][accessDate: 10-05-2010]
Spine
Spine[accessedResource: FMAID:13478][accessDate: 10-05-2010]
Backbone[accessedResource: FMAID:13478][accessDate: 10-05-2010]
Backbone
MA:0000308
axial skeleton
EHDAA:5049
axial skeleton[accessedResource: TAO:0000317][accessDate: 10-05-2010]
Kaposi's Sarcoma
A malignant neoplasm characterized by a vascular proliferation which usually contains blunt endothelial cells. Erythrocyte extravasation and hemosiderin deposition are frequently present. The most frequent site of involvement is the skin; however it may also occur internally. It generally develops in people with compromised immune systems including those with acquired immune deficiency syndrome (AIDS).
Multiple Hemorrhagic Sarcoma
Kaposi's sarcoma cell
multiple idiopathic hemorrhagic sarcoma cell[accessedResource: BTO:0002071][accessDate: 10-05-2010]
multiple idiopathic hemorrhagic sarcoma cell
idiopathic multiple pigmented hemorrhagic sarcoma cell[accessedResource: BTO:0002071][accessDate: 10-05-2010]
A multicentric, malignant neoplastic vascular proliferation characterized by bluish-red cutaneous nodules, usually on the legs, toes, or feet, that slowly increase in size and number and spread to more proximal sites. The tumors have endothelium-lined channels and vascular spaces mixed with aggregates of spindle-shaped cells; they may remain confined to skin and subcutaneous tissue, but widespread visceral involvement may occur.
Kaposi Sarcoma
KS[accessedResource: NCIt:C9087][accessDate: 10-05-2010]
Kaposi - Kaposi's Sarcoma
Kaposi - Kaposi's Sarcoma[accessedResource: NCIt:C9087][accessDate: 10-05-2010]
James Malone
A malignant neoplasm characterized by a vascular proliferation which usually contains blunt endothelial cells. Erythrocyte extravasation and hemosiderin deposition are frequently present. The most frequent site of involvement is the skin; however it may also occur internally. It generally develops in people with compromised immune systems including those with acquired immune deficiency syndrome (AIDS).[accessedResource: NCIt:C9087][accessDate: 10-05-2010]
Kaposi's Sarcoma[accessedResource: NCIt:C9087][accessDate: 10-05-2010]
Multiple Hemorrhagic Sarcoma[accessedResource: NCIt:C9087][accessDate: 10-05-2010]
BTO:0002071
idiopathic multiple pigmented hemorrhagic sarcoma cell
KS
A multicentric, malignant neoplastic vascular proliferation characterized by bluish-red cutaneous nodules, usually on the legs, toes, or feet, that slowly increase in size and number and spread to more proximal sites. The tumors have endothelium-lined channels and vascular spaces mixed with aggregates of spindle-shaped cells; they may remain confined to skin and subcutaneous tissue, but widespread visceral involvement may occur.[accessedResource: BTO:0002071][accessDate: 10-05-2010]
Kaposi Sarcoma[accessedResource: NCIt:C9087][accessDate: 10-05-2010]
NCIt:C9087
FBdv:00005317
EVM:2990009
gastrula[accessedResource: MAT:0000063][accessDate: 10-05-2010]
MAT:0000063
gastrulating mbryo[accessedResource: MAT:0000063][accessDate: 10-05-2010]
WBIs:0000010
XAO:1000005
James Malone
gastrulating mbryo
gastrula
gastrula stage
http://www.arabidopsis.org/servlets/TairObject?id=1005158643&type=germplasm
CS57619 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158643&type=germplasm
CS57619
James Malone
FBbt:00005482
anal pad specific anlage
James Malone
plant germ
The early developmental stage that, through embryological development, ultimately becomes an adult individual. In plants, that portion of a seed that will form the growing seedling following germination; it has a radicle, apical meristem, and embryonic leaf or leaves.[accessedResource: BTO:0001233][accessDate: 10-05-2010]
plant embryo
MAT:0000226
plant germ[accessedResource: BTO:0001233][accessDate: 10-05-2010]
ZEA:0015179
The early developmental stage that, through embryological development, ultimately becomes an adult individual. In plants, that portion of a seed that will form the growing seedling following germination; it has a radicle, apical meristem, and embryonic leaf or leaves.
James Malone
PO:0009009
BTO:0001233
GRO:0005343[accessedResource: BTO:0001233][accessDate: 10-05-2010]
GRO:0005343
MAT:0000347
plant fluid
James Malone
FMA:35175
knee
knee joint
James Malone
MO_738
timepoint
Tomasz Adamusiak
Jie Zheng
James Malone
A Daudi Burkitt's lymphoma cell line is a cell line.
A Daudi Burkitt's lymphoma cell line is bearer of Daudi Burkitt's lymphoma.
Daudi Burkitt's lymphoma cell line
Natural Language Generator 8th April 2010
James Malone
A 267b1 ki ras is a cell line.
A 267b1 ki ras derives from a prostate.
267B1
Natural Language Generator 8th April 2010
James Malone
The part of an animal that connects the head with the body.[accessedResource: BTO:0000420][accessDate: 10-05-2010]
Neck (volume)
BTO:0000420
pedicle
NIFSTD:sao1642908940
Tomasz Adamusiak
James Malone
Subdivision of body proper, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with the cervical vertebral coumn, it is partially surrounded by skin of neck. Examples: There is only one neck.
SAEL:70
FMAID:7155
The membranous tube that attaches the thorax to the margins of the occipital foramen.
EV:0100476
Neck (volume)[accessedResource: FMAID:7155][accessDate: 10-05-2010]
The membranous tube that attaches the thorax to the margins of the occipital foramen.[accessedResource: TGMA:0000005][accessDate: 10-05-2010]
pedicle[accessedResource: NIFSTD:sao1642908940][accessDate: 10-05-2010]
Spine Neck
The part of an animal that connects the head with the body.
Spine Neck[accessedResource: NIFSTD:sao1642908940][accessDate: 10-05-2010]
TGMA:0000005
MAT:0000297
Subdivision of body proper, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with the cervical vertebral coumn, it is partially surrounded by skin of neck. Examples: There is only one neck.[accessedResource: FMAID:7155][accessDate: 10-05-2010]
neck
JCRB0081
RERF-LC-MS
James Malone
Ele Holloway
GeneRIF:12893022
GeneRIF:15879687
GeneRIF:16088850
CORONARY DIS
Heart Diseases, Coronary[accessedResource: MSH:D003327][accessDate: 10-05-2010]
GeneRIF:14747236
CAD[accessedResource: NCIt:C26732][accessDate: 10-05-2010]
GeneRIF:12588779
GeneRIF:15607533
GeneRIF:12074827
An imbalance between myocardial functional requirements and the capacity of the CORONARY VESSELS to supply sufficient blood flow. It is a form of MYOCARDIAL ISCHEMIA (insufficient blood supply to the heart muscle) caused by a decreased capacity of the coronary vessels.
Coronary Disease[accessedResource: MSH:D003327][accessDate: 10-05-2010]
GeneRIF:12151850
GeneRIF:11859854
GeneRIF:14695459
GeneRIF:15598085
GeneRIF:12362314
GeneRIF:12594357
GeneRIF:11889198
DOID:3393
GeneRIF:12151853
GeneRIF:15920035
GeneRIF:12588754
CHD
GeneRIF:12801611
CHD (coronary heart disease)
GeneRIF:15199365
GeneRIF:12207101
GeneRIF:12879153
GeneRIF:15692099
GeneRIF:15585218
GeneRIF:15585208
GeneRIF:15887860
GeneRIF:15784171
MSH:D003327
coronary heart disease
GeneRIF:12117730
GeneRIF:12925562
GeneRIF:12818402
Coronary Artery Disease
NCIt:C26732
Disease, Coronary
GeneRIF:15837082
Coronary Artery Disease[accessedResource: NCIt:C26732][accessDate: 10-05-2010]
GeneRIF:12666851
GeneRIF:15877284
GeneRIF:16159602
James Malone
Coronary Heart Diseases
An imbalance between myocardial functional requirements and the capacity of the CORONARY VESSELS to supply sufficient blood flow. It is a form of MYOCARDIAL ISCHEMIA (insufficient blood supply to the heart muscle) caused by a decreased capacity of the coronary vessels.[accessedResource: MSH:D003327][accessDate: 10-05-2010]
CORONARY HEART DIS
GeneRIF:15585206
GeneRIF:14576201
Coronary heart disease is a cardiovascular disease in which there is a failure of coronary circulation to supply adequate circulation to cardiac muscle and surrounding tissue.
Coronary Diseases
GeneRIF:12030385
GeneRIF:11947914
GeneRIF:15825968
GeneRIF:14592833
Diseases, Coronary[accessedResource: MSH:D003327][accessDate: 10-05-2010]
CAD
GeneRIF:15379752
GeneRIF:12104085
GeneRIF:11972304
GeneRIF:11916624
GeneRIF:15193812
Narrowing of the coronary arteries due to fatty deposits inside the arterial walls.[accessedResource: NCIt:C26732][accessDate: 10-05-2010]
CORONARY DIS[accessedResource: MSH:D003327][accessDate: 10-05-2010]
GeneRIF:16113535
GeneRIF:15454272
GeneRIF:12408999
GeneRIF:12842840
GeneRIF:12676816
GeneRIF:11919305
Narrowing of the coronary arteries due to fatty deposits inside the arterial walls.
GeneRIF:15653107
GeneRIF:11862316
GeneRIF:14967821
CHD - Coronary heart disease[accessedResource: DOID:3393][accessDate: 10-05-2010]
GeneRIF:15920055
CORONARY HEART DIS[accessedResource: MSH:D003327][accessDate: 10-05-2010]
plant cell
Adenocarcinoma of Cervix Uteri[accessedResource: NCIt:C4029][accessDate: 10-05-2010]
Adenocarcinoma of Cervix[accessedResource: NCIt:C4029][accessDate: 10-05-2010]
Adenocarcinoma of Cervix Uteri
Cervix Adenocarcinoma
cervical adenocarcinoma
DOID:3702
NCIt:C4029
An adenocarcinoma arising from the cervical epithelium. It accounts for approximately 15% of invasive cervical carcinomas. Increased numbers of sexual partners and human papilloma virus (HPV) infection are risk factors. Grossly, advanced cervical adenocarcinoma may present as an exophytic mass, an ulcerated lesion, or diffuse cervical enlargement. Microscopically, the majority of cervical adenocarcinomas are of the endocervical (mucinous) type.
James Malone
Adenocarcinoma of the Cervix Uteri
Cervix Uteri Adenocarcinoma[accessedResource: NCIt:C4029][accessDate: 10-05-2010]
Adenocarcinoma of the Cervix Uteri[accessedResource: NCIt:C4029][accessDate: 10-05-2010]
Cervix Adenocarcinoma[accessedResource: NCIt:C4029][accessDate: 10-05-2010]
Adenocarcinoma of the Cervix
An adenocarcinoma arising from the cervical epithelium. It accounts for approximately 15% of invasive cervical carcinomas. Increased numbers of sexual partners and human papilloma virus (HPV) infection are risk factors. Grossly, advanced cervical adenocarcinoma may present as an exophytic mass, an ulcerated lesion, or diffuse cervical enlargement. Microscopically, the majority of cervical adenocarcinomas are of the endocervical (mucinous) type.[accessedResource: NCIt:C4029][accessDate: 10-05-2010]
Adenocarcinoma of the Uterine Cervix
Adenocarcinoma of the Cervix[accessedResource: NCIt:C4029][accessDate: 10-05-2010]
Uterine Cervix Adenocarcinoma[accessedResource: NCIt:C4029][accessDate: 10-05-2010]
Adenocarcinoma of Uterine Cervix[accessedResource: NCIt:C4029][accessDate: 10-05-2010]
Adenocarcinoma of Uterine Cervix
Adenocarcinoma of the Uterine Cervix[accessedResource: NCIt:C4029][accessDate: 10-05-2010]
Cervix Uteri Adenocarcinoma
Adenocarcinoma of Cervix
Uterine Cervix Adenocarcinoma
accelerated neurological senescence
James Malone
Ele Holloway
MO_541
http://www.ebi.ac.uk/efo/EFO_0002089
A water bath is a temperature control bath in which a water acts as contact medium enabling temperature transfer from the heating element or cooling element to the sample. The temperature can be controlled in the 0 to 100 degree centigrade range (under normal pressure).
water bath
James Malone
ZFA:0001058
Fin that is the most posterior median fin. It is composed of a complex of three modified centra and modified neural and hemal arches and spines.
Fin that is the most posterior median fin. It is composed of a complex of three modified centra and modified neural and hemal arches and spines.[accessedResource: ZFA:0001058][accessDate: 10-05-2010]
tail[accessedResource: ZFA:0001058][accessDate: 10-05-2010]
caudal fin
tail fin[accessedResource: ZFA:0001058][accessDate: 10-05-2010]
tail
James Malone
tail fin
James Malone
Tomasz Adamusiak
true
Jie Zheng
1.6
Acute Lymphocytic Leukemia
Duplicate with 'disease factor' EFO_0000408.
obsolete_disease state
The name of the pathology diagnosed in the organism from which the biomaterial was derived. The disease state is normal if no disease has been diagnosed. E.g Acute Lymphocytic Leukemia
MO_787
IMR-90
James Malone
carbonyl dichloride
phosgene
http://www.arabidopsis.org/servlets/TairObject?id=1005158897&type=germplasm
CS57873 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158897&type=germplasm
CS57873
James Malone
R46
James Malone
SNU449
James Malone
Ele Holloway
Quality? Is this intrinsic to the organism?
MO_43
The number of cell passages if the organism or organism part that is cultured is unicellular or a cell culture; otherwise the number of generations.
generation
Tomasz Adamusiak
Jie Zheng
James Malone
true
epigenetic factor
NCIt:C3771
true
1.5
Lobular carcinoma (morphologic abnormality)
Lobular carcinoma of breast (disorder)
Lobular carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:89740008][accessDate: 10-05-2010]
James Malone
obsolete_lobular breast carcinoma
Infiltrating lobular carcinoma[accessedResource: SNOMEDCT:89740008][accessDate: 10-05-2010]
DOID:3457
Lobular carcinoma NOS (morphologic abnormality)
SNOMEDCT:189713007
[M]Lobular carcinoma NOS[accessedResource: SNOMEDCT:189713007][accessDate: 10-05-2010]
Lobular carcinoma NOS (morphologic abnormality)[accessedResource: DOID:3457][accessDate: 10-05-2010]
An adenocarcinoma of the breast arising from the lobules. This is a relatively uncommon carcinoma, represents approximately 10% of the breast adenocarcinomas and is often bilateral or multifocal.[accessedResource: NCIt:C3771][accessDate: 10-05-2010]
An adenocarcinoma of the breast arising from the lobules. This is a relatively uncommon carcinoma, represents approximately 10% of the breast adenocarcinomas and is often bilateral or multifocal.
Lobular carcinoma, NOS[accessedResource: SNOMEDCT:89740008][accessDate: 10-05-2010]
Lobular carcinoma of the breast[accessedResource: DOID:3457][accessDate: 10-05-2010]
Carcinoma, Lobular
Lobular carcinoma of breast (disorder)[accessedResource: DOID:3457][accessDate: 10-05-2010]
[M]Lobular carcinoma NOS (morphologic abnormality)
Lobular carcinoma, NOS
A infiltrating (invasive) breast cancer, relatively uncommon, accounting for only 5%-10% of breast tumors in most series. It is often an area of ill-defined thickening in the breast, in contrast to the dominant lump characteristic of ductal carcinoma. It is typically composed of small cells in a linear arrangement with a tendency to grow around ducts and lobules. There is likelihood of axillary nodal involvement with metastasis to meningeal and serosal surfaces. (DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p1205)[accessedResource: MSH:D018275][accessDate: 10-05-2010]
Lobular Breast Carcinoma
GeneRIF:15803365
Duplicate with invasive lobular carcinoma (EFO_0000553)
MSH:D018275
[M]Lobular carcinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189713007][accessDate: 10-05-2010]
Lobular Carcinoma of Breast[accessedResource: NCIt:C3771][accessDate: 10-05-2010]
GeneRIF:15695379
Lobular carcinoma of the breast
[M]Lobular carcinoma NOS
Lobular Carcinomas
GeneRIF:12661036
Infiltrating lobular carcinoma
Lobular Breast Carcinoma[accessedResource: NCIt:C3771][accessDate: 10-05-2010]
Carcinomas, Lobular[accessedResource: MSH:D018275][accessDate: 10-05-2010]
Lobular Carcinoma[accessedResource: MSH:D018275][accessDate: 10-05-2010]
A infiltrating (invasive) breast cancer, relatively uncommon, accounting for only 5%-10% of breast tumors in most series. It is often an area of ill-defined thickening in the breast, in contrast to the dominant lump characteristic of ductal carcinoma. It is typically composed of small cells in a linear arrangement with a tendency to grow around ducts and lobules. There is likelihood of axillary nodal involvement with metastasis to meningeal and serosal surfaces. (DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p1205)
SNOMEDCT:278054005
Lobular carcinoma of breast
GeneRIF:12907138
SNOMEDCT:89740008
Lobular adenocarcinoma
Lobular Adenocarcinoma[accessedResource: NCIt:C3771][accessDate: 10-05-2010]
http://www.ebi.ac.uk/efo/EFO_0001811
MO_740
uM
James Malone
micromolar
true
µM
Tomasz Adamusiak
Jie Zheng
A unit of molarity which is equal to one millionth of a molar or 10^[-6] M.
An assay in which the methylation state of DNA is determined and is compared between samples using sequencing based technology
methylation profiling by high throughput sequencing
HEC-1-A
HEC-1A
HEC1A
Ele Holloway
James Malone
RD
James Malone
Ele Holloway
CL:0000010
cell line cell
James Malone
Ele Holloway
James Malone
The underside concavity where the arm and the shoulder are joined.
Underarm[accessedResource: NCIt:C12674][accessDate: 10-05-2010]
axilla
Underarm
Armpit
The underside concavity where the arm and the shoulder are joined.[accessedResource: NCIt:C12674][accessDate: 10-05-2010]
NCIt:C12674
Armpit[accessedResource: NCIt:C12674][accessDate: 10-05-2010]
MO_1019
cell component comparison design
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158891&type=germplasm
CS57867 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158891&type=germplasm
CS57867
James Malone
Algerian Mouse
http://www.ebi.ac.uk/efo/EFO_0002649
Mus spretus
James Malone
ovarian serous adenocarcinoma
NCIH226
James Malone
Ele Holloway
sciatic nerve
NCIt:C52810
The longest single nerve that is formed by the merging of the ventral rami of the L4, L5, and S1 in the pelvis and passes down the lower limb where it divides into the common peroneal and tibial nerves.
James Malone
nervus ischiadicus[accessedResource: BTO:0001221][accessDate: 10-05-2010]
FMA:19034
nervus sciaticus[accessedResource: BTO:0001221][accessDate: 10-05-2010]
nervus ischiadicus
nervus sciaticus
The largest nerve of the body: origin, sacral plexus-L4-S3; it leaves the pelvis through the greater sciatic foramen; branches, divides into the tibial and common peroneal nerves, usually in lower third of thigh; distribution-see individual branches, in this table; modality, general sensory and motor.[accessedResource: BTO:0001221][accessDate: 10-05-2010]
The longest single nerve that is formed by the merging of the ventral rami of the L4, L5, and S1 in the pelvis and passes down the lower limb where it divides into the common peroneal and tibial nerves.[accessedResource: NCIt:C52810][accessDate: 10-05-2010]
BTO:0001221
The largest nerve of the body: origin, sacral plexus-L4-S3; it leaves the pelvis through the greater sciatic foramen; branches, divides into the tibial and common peroneal nerves, usually in lower third of thigh; distribution-see individual branches, in this table; modality, general sensory and motor.
MM1
James Malone
NCIt:C53147
A muscle in the back of the thigh. Its action involves the knee flexion and hip extension.
A muscle in the back of the thigh. Its action involves the knee flexion and hip extension.[accessedResource: NCIt:C53147][accessDate: 10-05-2010]
biceps femoris
James Malone
Tomasz Adamusiak
One of a pair of cells flanking the stomatal pore and causing the opening and closing of the pore by changes in turgor.
guard cell
One of a pair of cells flanking the stomatal pore and causing the opening and closing of the pore by changes in turgor.[accessedResource: CL:0000292][accessDate: 10-05-2010]
stomatal guard cell
stomatal guard cell[accessedResource: CL:0000292][accessDate: 10-05-2010]
CL:0000292
NCIH522
James Malone
Ele Holloway
interventricular septum of heart[accessedResource: BTO:0002483][accessDate: 10-05-2010]
interventriculare cordis
Cardiac septum which separates the right ventricle from the left ventricle.[accessedResource: FMA:7133][accessDate: 10-05-2010]
interventricular septum of heart
FMA:7133
ventricular septum[accessedResource: BTO:0002483][accessDate: 10-05-2010]
ventricular septum
The partition that separates the left ventricle from the right ventricle, consisting of a muscular and a membranous part.
interventriculare cordis[accessedResource: BTO:0002483][accessDate: 10-05-2010]
BTO:0002483
James Malone
The partition that separates the left ventricle from the right ventricle, consisting of a muscular and a membranous part.[accessedResource: BTO:0002483][accessDate: 10-05-2010]
interventricular septum
Cardiac septum which separates the right ventricle from the left ventricle.
(2R)-N-[4-cyano-3-(trifluoromethyl)phenyl]-3-[(4-fluorophenyl)sulfonyl]-2-hydroxy-2-methylpropanamide
InChI=1/C18H14F4N2O4S/c1-17(26,10-29(27,28)14-6-3-12(19)4-7-14)16(25)24-13-5-2-11(9-23)15(8-13)18(20,21)22/h2-8,26H,10H2,1H3,(H,24,25)/t17-/m0/s1/f/h24H
InChIKey=LKJPYSCBVHEWIU-ARSKLOKFDL
James Malone
CHEBI:3090
Casodex
bicalutamide
http://www.ebi.ac.uk/efo/EFO_0002006
C18H14F4N2O4S
C[C@](O)(CS(=O)(=O)c1ccc(F)cc1)C(=O)Nc2ccc(C#N)c(c2)C(F)(F)F
An amide that has formula C18H14F4N2O4S.
bicalutamida
bicalutamidum
A cell that composes the bulk of the islets of Langerhans and secretes insulin.
beta cell
A cell that composes the bulk of the islets of Langerhans and secretes insulin.[accessedResource: NCIt:C32199][accessDate: 10-05-2010]
Insulin Cell
Insulin Secreting Cell[accessedResource: NCIt:C32199][accessDate: 10-05-2010]
beta cell islets
James Malone
NCIt:C32199
Insulin Secreting Cell
Insulin Cell[accessedResource: NCIt:C32199][accessDate: 10-05-2010]
adrenergic uptake inhibitors
http://www.ebi.ac.uk/efo/EFO_0001850
CHEBI:35640
Adrenergic uptake inhibitors are drugs that block the transport of adrenergic transmitters into axon terminals or into storage vesicles within terminals. The tricyclic antidepressants and amphetamines are among the therapeutically important drugs that may act via inhibition of adrenergic transport. Many of these drugs also block transport of serotonin.
adrenergic uptake inhibitor
James Malone
PC3 cell
James Malone
MCC:0000380
Human prostate carcinoma cell line; established from the bone marrow metastasis isolated post-mortem from a 62-year-old Caucasian man with grade IV prostate cancer (poorly differentiated adenocarcinoma) after androgen suppression therapy; described to form tumors in nude mice, to grow in soft agar, and to be unresponsive to androgen treatment.
PC3 cell[accessedResource: BTO:0001061][accessDate: 10-05-2010]
PC-3 cell
Human prostate carcinoma cell line; established from the bone marrow metastasis isolated post-mortem from a 62-year-old Caucasian man with grade IV prostate cancer (poorly differentiated adenocarcinoma) after androgen suppression therapy; described to form tumors in nude mice, to grow in soft agar, and to be unresponsive to androgen treatment.[accessedResource: BTO:0001061][accessDate: 10-05-2010]
Ele Holloway
BTO:0001061
PC-3
PC3
PC-3 cell[accessedResource: BTO:0001061][accessDate: 10-05-2010]
BTO:0001572
BTO:0001572
A thin layer of cartilage, usually hyaline, on the articular surface of bones in synovial joints.
A thin layer of cartilage, usually hyaline, on the articular surface of bones in synovial joints.[accessedResource: BTO:0001572][accessDate: 10-05-2010]
articular cartilage
James Malone
Tretinoine (French) (EINECS)
all-trans-Vitamin A1 acid
Renova
Retin-A
A retinoic acid that has formula C20H28O2.
InChIKey=SHGAZHPCJJPHSC-FWNNKZREDV
all-trans-Vitamin A acid
all-trans-Tretinoin
Tretin M
(2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraenoic acid
Stieva-A
Ro 1-5488
http://www.ebi.ac.uk/efo/EFO_0001481
CHEBI:15367
AGN 100335
Retinoic acid
Vesanoid
CC(\\C=C\\C1=C(C)CCCC1(C)C)=C/C=C/C(C)=C/C(O)=O
(all-E)-3,7-Dimethyl-9-(2,6,6-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid
Acide retinoique (French) (DSL)
all-trans-retinoic acid
3,7-Dimethyl-9-(2,6,6-trimethyl-1-cyclohexene-1-yl)-2,4,6,8-nonatetraenoic acid (ECL)
all-trans-beta-Retinoic acid
InChI=1/C20H28O2/c1-15(8-6-9-16(2)14-19(21)22)11-12-18-17(3)10-7-13-20(18,4)5/h6,8-9,11-12,14H,7,10,13H2,1-5H3,(H,21,22)/b9-6+,12-11+,15-8+,16-14+/f/h21H
trans-Retinoic acid
tretinoin
C20H28O2
beta-Retinoic acid
all-(E)-Retinoic acid
Vitamin A acid
Retisol-A
MO_984
consultant
Tomasz Adamusiak
MAT:0000367
BTO:0000159
A resting stage of a plant (as the lily, onion, hyacinth, or tulip) that is usually formed underground and consists of a short stem base bearing one or more buds enclosed in overlapping membranous or fleshy leaves.
A resting stage of a plant (as the lily, onion, hyacinth, or tulip) that is usually formed underground and consists of a short stem base bearing one or more buds enclosed in overlapping membranous or fleshy leaves.[accessedResource: BTO:0000159][accessDate: 10-05-2010]
bulb
James Malone
http://www.ebi.ac.uk/efo/EFO_0001688
UO:0000011
true
An electric current unit which is equal to the constant current which, if maintained in two straight parallel conductors of infinite length, of negligible circular cross-section, and placed 1 m apart in vacuum, would produce between these conductors a force equal to 2 x 10^[-7] newton per meter of length.
An ampere is an electric current unit which is equal to the constant current which, if maintained in two straight parallel conductors of infinite length, of negligible circular cross-section, and placed 1 m apart in vacuum, would produce between these conductors a force equal to 2 x 10^[-7] newton per meter of length.
A
James Malone
ampere
BTO:0000772
James Malone
An immature lymphocyte that has enlarged in response to antigenic stimulation.
lymphoblast
Often referred to as a blast cell. Unlike other usages of the suffix -blast a lymphoblast is a further differentiation of a lymphocyte, T- or B-, occasioned by an antigenic stimulus. The lymphoblast usually develops by enlargement of a lymphocyte, active re-entry to the S phase of the cell cycle, mitogenesis and production of much m-RNA and ribosomes.[accessedResource: BTO:0000772][accessDate: 10-05-2010]
NCIt:C13013
Often referred to as a blast cell. Unlike other usages of the suffix -blast a lymphoblast is a further differentiation of a lymphocyte, T- or B-, occasioned by an antigenic stimulus. The lymphoblast usually develops by enlargement of a lymphocyte, active re-entry to the S phase of the cell cycle, mitogenesis and production of much m-RNA and ribosomes.
An immature lymphocyte that has enlarged in response to antigenic stimulation.[accessedResource: NCIt:C13013][accessDate: 10-05-2010]
agrochemicals
agrichemicals
James Malone
agrichemical
agricultural chemicals
agrochemical
http://www.ebi.ac.uk/efo/EFO_0001832
An agrochemical is a substance that is used in agriculture or horticulture.
CHEBI:33286
http://www.arabidopsis.org/servlets/TairObject?id=1005158795&type=germplasm
CS57771 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158795&type=germplasm
CS57771
James Malone
http://www.ebi.ac.uk/efo/EFO_0002670
epigallocatechin gallate
SAEL:106
MAT:0000295
A small, slender, rigid, needle- or thornlike spicule.[accessedResource: TGMA:000136][accessDate: 10-05-2010]
1: The part of the mammalian body between the neck and the abdomen; also: its cavity in which the heart and lungs lie.n2: The middle of the three chief divisions of the body of an insect; also: the corresponding part of a crustacean or an arachnid.
The main middle section of the insect body comprising three thoracic rings: the pro-, the meso- and the metathoraces which are more or less well fused and cask-like sometimes having on the upper lateral part one of two pairs of wings, while on the ventrolateral part each thoracic ring bears a pair of legs.[accessedResource: FBbt:00000015][accessDate: 10-05-2010]
BTO:0001368
Chest
thorax
EV:0100010
FMAID:9576
James Malone
TGMA:000136
Any blade with a few short branches arising apically or subapically.
FBbt:00000015
The main middle section of the insect body comprising three thoracic rings: the pro-, the meso- and the metathoraces which are more or less well fused and cask-like sometimes having on the upper lateral part one of two pairs of wings, while on the ventrolateral part each thoracic ring bears a pair of legs.
1: The part of the mammalian body between the neck and the abdomen; also: its cavity in which the heart and lungs lie.n2: The middle of the three chief divisions of the body of an insect; also: the corresponding part of a crustacean or an arachnid.[accessedResource: BTO:0001368][accessDate: 10-05-2010]
Chest[accessedResource: FMAID:9576][accessDate: 10-05-2010]
A small, slender, rigid, needle- or thornlike spicule.
Subdivision of trunk proper, which is demarcated from the neck by the plane of the superior thoracic aperture and from the abdomen internally by the inferior surface of the diaphragm and externally by the costal margin and associated with the thoracic vertebral column and ribcage and from the back of the thorax by the external surface of the posterolateral part of the rib cage, the anterior surface of the thoracic vertebral column and the posterior axillary lines; together with the abdomen and the perineum, it constitutes the trunk proper. Examples: There is only one thorax.
Subdivision of trunk proper, which is demarcated from the neck by the plane of the superior thoracic aperture and from the abdomen internally by the inferior surface of the diaphragm and externally by the costal margin and associated with the thoracic vertebral column and ribcage and from the back of the thorax by the external surface of the posterolateral part of the rib cage, the anterior surface of the thoracic vertebral column and the posterior axillary lines; together with the abdomen and the perineum, it constitutes the trunk proper. Examples: There is only one thorax.[accessedResource: FMAID:9576][accessDate: 10-05-2010]
James Malone
Ele Holloway
dibenzazepine
dibenzoazepine
CHEBI:47804
dibenzazepines
dibenzoazepines
http://www.ebi.ac.uk/efo/EFO_0002491
kelvin
http://www.ebi.ac.uk/efo/EFO_0001689
A thermodynamic temperature unit which is equal to the fraction 1/273.16 of the thermodynamic temperature of the triple point of water.
James Malone
Jie Zheng
A kelvin is a thermodynamic temperature unit which is equal to the fraction 1/273.16 of the thermodynamic temperature of the triple point of water.
Tomasz Adamusiak
true
MO_614
K
A Giant Cell Tumor (GCT) cell line derived from a human fibrous histiocytoma lung metastasis
GCT
James Malone
Ele Holloway
EV:0100456
MFO:0002960
vasculature[accessedResource: TAO:0001079][accessDate: 10-05-2010]
blood vessels[accessedResource: TAO:0001079][accessDate: 10-05-2010]
TAO:0001079
blood vessels
BTO:0001102
SAEL:9
James Malone
blood vessel
Any of the vessels through which blood circulates in the body.
Any of the vessels through which blood circulates in the body.[accessedResource: BTO:0001102][accessDate: 10-05-2010]
circulatory system[accessedResource: TAO:0001079][accessDate: 10-05-2010]
vasculature
vessel
vessel[accessedResource: MAT:0000393][accessDate: 10-05-2010]
MAT:0000393
circulatory system
embryonic day 16.5
Tomasz Adamusiak
Jie Zheng
https://www.cbil.upenn.edu/RADQuerier/php/displayStudy.php?study_id=449
Athero-susceptible regions of aorta.
disturbed flow regions
Tomasz Adamusiak
Jie Zheng
http://jaxmice.jax.org/strain/009309.html
ILSXISS50/TejJ
Tomasz Adamusiak
NIH3T3-L1
James Malone
RGD:1582190
Dahl salt-sensitive
James Malone
MCF12A
James Malone
Skin[accessedResource: NCIt:C12470][accessDate: 10-05-2010]
integumental cell
Integument
An organ that constitutes the external surface of the body. It consists of the epidermis, dermis, and skin appendages.[accessedResource: NCIt:C12470][accessDate: 10-05-2010]
Integument[accessedResource: NCIt:C12470][accessDate: 10-05-2010]
Skin
An organ that constitutes the external surface of the body. It consists of the epidermis, dermis, and skin appendages.
NCIt:C12470
James Malone
NCIH187
James Malone
Ele Holloway
TAO:0000107
eyeball
eyeball[accessedResource: TAO:0000107][accessDate: 10-05-2010]
A light-perceptive organ consisting of an aggregation of optic elements (ommatidia) generally located on each side of the head; the cuticular part (cornea) consists of several hundred circular corneal facets (lenses); bounded by the ocular sclerite.[accessedResource: TGMA:0000024][accessDate: 10-05-2010]
"Facettenauge"
compound eye[accessedResource: FBbt:00004508][accessDate: 10-05-2010]
EMAPA:16198
"Komplexauge"[accessedResource: TGMA:0000024][accessDate: 10-05-2010]
Orbital region[accessedResource: FMAID:54448][accessDate: 10-05-2010]
An organ of sight; especially: a nearly spherical hollow organ that is lined with a sensitive retina, is lodged in a bony orbit in the skull, is the vertebrate organ of sight, and is normally paired.n2: All the visible structures within and surrounding the orbit and including eyelids, eyelashes, and eyebrows.[accessedResource: BTO:0000439][accessDate: 10-05-2010]
FMAID:54448
BTO:0000439
A light-perceptive organ consisting of an aggregation of optic elements (ommatidia) generally located on each side of the head; the cuticular part (cornea) consists of several hundred circular corneal facets (lenses); bounded by the ocular sclerite.
compound eye
Tomasz Adamusiak
TGMA:0000024
Orbital part of face
adult compound eye
visual apparatus[accessedResource: MAT:0000140][accessDate: 10-05-2010]
MA:0000261
XAO:0000179
visual apparatus
The compound eye is a light sensing organ composed of ommatidia.[accessedResource: FBbt:00004508][accessDate: 10-05-2010]
eyes
EHDAA:936
An organ of sight; especially: a nearly spherical hollow organ that is lined with a sensitive retina, is lodged in a bony orbit in the skull, is the vertebrate organ of sight, and is normally paired.n2: All the visible structures within and surrounding the orbit and including eyelids, eyelashes, and eyebrows.
"zusammengesetztes Auge"[accessedResource: TGMA:0000024][accessDate: 10-05-2010]
"Facettenauge"[accessedResource: TGMA:0000024][accessDate: 10-05-2010]
TAO:0001127
eye structure
adult compound eye[accessedResource: TGMA:0000024][accessDate: 10-05-2010]
Cavitated compound organ that consists of the neural retina, lens, cornea and iris and is the sensory apparatus of the visual system.
MFO:0003480
MAT:0000140
"Komplexauge"
AAO:0000632
visual_system
NIFSTD:birnlex_1169
The compound eye is a light sensing organ composed of ommatidia.
TADS:0000061
FBbt:00004508
Cavitated compound organ that consists of the neural retina, lens, cornea and iris and is the sensory apparatus of the visual system.[accessedResource: ZFA:0000107][accessDate: 10-05-2010]
Orbital part of face[accessedResource: FMAID:54448][accessDate: 10-05-2010]
eye
visual_system[accessedResource: MAT:0000140][accessDate: 10-05-2010]
Orbital region
James Malone
ZFA:0000107
eye[accessedResource: FBbt:00004508][accessDate: 10-05-2010]
"zusammengesetztes Auge"
EV:0100336
eyes[accessedResource: MAT:0000140][accessDate: 10-05-2010]
http://www.ebi.ac.uk/efo/EFO_0001841
CHEBI:35481
A drug that has principally analgesic, antipyretic and anti-inflammatory actions. Non-narcotic analgesics do not bind to opioid receptors.
non-narcotic analgesic
James Malone
FMA:77536
inferior parietal lobule
James Malone
ArrayExpress production team
An assay in which the transcriptome of a biological sample is analysed.
transcription profiling
James Malone
esophageal carcinoma
obsolete_rat strain
NIFSTD:birnlex_203
2.0.1
consolodation of strain with taxon. rat strain subclasses moved to subclasses of rattus
Tomasz Adamusiak
true
Strain or line specific to rat.
James Malone
HCC2218
James Malone
Ele Holloway
MO_769
investigator
Tomasz Adamusiak
An organization role is a role which is borne by an organization.
organization role
James Malone
Any of the rounded masses of lymphoid tissue that are surrounded by a capsule of connective tissue, are distributed along the lymphatic vessels, and contain numerous lymphocytes which filter the flow of lymph.
James Malone
MA:00000139
lymph gland[accessedResource: BTO:0000784][accessDate: 10-05-2010]
EV:0100050
Any of the rounded masses of lymphoid tissue that are surrounded by a capsule of connective tissue, are distributed along the lymphatic vessels, and contain numerous lymphocytes which filter the flow of lymph.[accessedResource: BTO:0000784][accessDate: 10-05-2010]
lymph node
BTO:0000784
lymph gland
FMAID:5034
MAT:0000442
1-benzofuran
InChI=1/C8H6O/c1-2-4-8-7(3-1)5-6-9-8/h1-6H
http://www.ebi.ac.uk/efo/EFO_0002486
2,3-benzofuran
cumarone
InChIKey=IANQTJSKSUMEQM-UHFFFAOYAU
James Malone
coumaron
benzo[b]furan
A benzofuran that has formula C8H6O.
C8H6O
c1ccc2occc2c1
BENZOFURAN
coumarone
Ele Holloway
CHEBI:35260
NCIH810
James Malone
Ele Holloway
colleterial gland[accessedResource: FBbt:00004914][accessDate: 10-05-2010]
female accessory gland
FBbt:00004914
parovarium
parovarium[accessedResource: FBbt:00004914][accessDate: 10-05-2010]
Small, bilaterally paired gland that lies behind the spermathecae and is connected to the uterus by a duct. The gland wall consists of a single layer of polygonal cells, each with a large vacuole and a minute acidophillic granule towards the gland lumen.[accessedResource: FBbt:00004914][accessDate: 10-05-2010]
colleterial gland
ACgl
ACgl[accessedResource: FBbt:00004914][accessDate: 10-05-2010]
Develops from male repressed primordium.
Small, bilaterally paired gland that lies behind the spermathecae and is connected to the uterus by a duct. The gland wall consists of a single layer of polygonal cells, each with a large vacuole and a minute acidophillic granule towards the gland lumen.
CL:0000047
neural stem cell
neural stem progenitor cell
neuronal stem cell
James Malone
androgeno
androgen
James Malone
androgenos
androgenes
Androgene
http://www.ebi.ac.uk/efo/EFO_0001484
androgens
A steroid hormone that stimulates or controls the development and maintenance of masculine characteristics in vertebrates by binding to androgen receptors.
CHEBI:50113
Malignant Tumor of the CNS
Glial Cell Tumor
Malignant Neoplasm of the Central Nervous System[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
Cancer of Central Nervous System[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
Benign and malignant central nervous system neoplasms derived from glial cells (i.e., astrocytes, oligodendrocytes, and ependymocytes). Astrocytes may give rise to astrocytomas ( ASTROCYTOMA) or glioblastoma multiforme (see GLIOBLASTOMA). Oligodendrocytes give rise to oligodendrogliomas ( OLIGODENDROGLIOMA) and ependymocytes may undergo transformation to become EPENDYMOMA; CHOROID PLEXUS NEOPLASMS; or colloid cysts of the third ventricle (MeSH).[accessedResource: NIFSTD:birnlex_12618][accessDate: 10-05-2010]
Central Nervous System Neoplasms, Malignant
Malignant Tumor of Central Nervous System[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
Malignant Neoplasm of the CNS[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
NCIt:C4627
Malignant Tumor of the Central Nervous System[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
NIFSTD:birnlex_12618
Malignant CNS Tumor[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
James Malone
Cancer of the Central Nervous System[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
Cancer of CNS
central nervous system cancer
Malignant Central Nervous System Tumor
Malignant Tumor of CNS[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
Cancer of the CNS
CNS Neoplasms, Malignant[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
CNS Cancer
Malignant Central Nervous System Neoplasm[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
Tomasz Adamusiak
Glial Cell Tumor[accessedResource: NIFSTD:birnlex_12618][accessDate: 10-05-2010]
Malignant Neoplasm of CNS[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
Malignant Central Nervous System Tumor[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
Malignant CNS Neoplasm
Malignant Central Nervous System Neoplasm
Malignant Neoplasm of CNS
Malignant CNS Tumor
CNS Cancer[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
Cancer of Central Nervous System
Malignant CNS Neoplasm[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
Malignant CNS Neoplasms
Cancer of CNS[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
Malignant Neoplasm of Central Nervous System[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
Glioma
Central Nervous System Neoplasms, Malignant[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
Malignant Tumor of CNS
Malignant Tumor of Central Nervous System
Malignant Neoplasm of the Central Nervous System
Cancer of the CNS[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
A primary or metastatic malignant neoplasm involving the brain or spinal cord. Representative examples include anaplastic astrocytoma, glioblastoma, anaplastic (malignant) meningioma, lymphoma, and metastatic carcinoma from another anatomic site.
A primary or metastatic malignant neoplasm involving the brain or spinal cord. Representative examples include anaplastic astrocytoma, glioblastoma, anaplastic (malignant) meningioma, lymphoma, and metastatic carcinoma from another anatomic site.[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
Glioma[accessedResource: NIFSTD:birnlex_12618][accessDate: 10-05-2010]
Malignant Tumor of the Central Nervous System
Cancer of the Central Nervous System
Benign and malignant central nervous system neoplasms derived from glial cells (i.e., astrocytes, oligodendrocytes, and ependymocytes). Astrocytes may give rise to astrocytomas ( ASTROCYTOMA) or glioblastoma multiforme (see GLIOBLASTOMA). Oligodendrocytes give rise to oligodendrogliomas ( OLIGODENDROGLIOMA) and ependymocytes may undergo transformation to become EPENDYMOMA; CHOROID PLEXUS NEOPLASMS; or colloid cysts of the third ventricle (MeSH).
Malignant Tumor of the CNS[accessedResource: NCIt:C4627][accessDate: 10-05-2010]
Malignant Neoplasm of the CNS
Malignant Neoplasm of Central Nervous System
https://www.cbil.upenn.edu/RADQuerier/php/sampleInfo.php?assay_id=10943&&study_id=3144
Severe Combined Immunodeficiency (SCID) mutant in C57BL6 genetic background mouse strain.
C57BL/6-scid
Tomasz Adamusiak
Jie Zheng
The temperature that a biosource is exposed to.
exposure temperature
James Malone
James Malone
NCIt:C33346
Posterior central gyrus[accessedResource: FMA:61896][accessDate: 10-05-2010]
Posterior central gyrus
Postrolandic gyrus[accessedResource: FMA:61896][accessDate: 10-05-2010]
postcentral gyrus
FMA:61896
Postcentral convolution[accessedResource: FMA:61896][accessDate: 10-05-2010]
Postrolandic gyrus
Postcentral convolution
James Malone
NCI Metathesaurus
tumour
merged with neoplasm EFO_0000616
An abnormal mass of tissue that results from excessive cell division. Tumors perform no useful body function. They may be benign (not cancerous) or malignant (cancerous).
Breast_Tumor_Luminal
obsolete_tumor
1.8
true
NCIH2052
James Malone
Ele Holloway
InChI=1/C21H24F3N3S/c1-25-11-13-26(14-12-25)9-4-10-27-17-5-2-3-6-19(17)28-20-8-7-16(15-18(20)27)21(22,23)24/h2-3,5-8,15H,4,9-14H2,1H3
http://www.ebi.ac.uk/efo/EFO_0001631
10-[3-(4-methylpiperazin-1-yl)propyl]-2-(trifluoromethyl)-10H-phenothiazine
10-[3-(4-methyl-1-piperazinyl)propyl]-2-(trifluoromethyl)-10H-phenothiazine
trifluoroperazine
CHEBI:45951
C21H24F3N3S
trifluperazine
10-[3-(4-METHYL-PIPERAZIN-1-YL)-PROPYL]-2-TRIFLUOROMETHYL-10H-PHENOTHIAZINE
trifluoperazinum
CN1CCN(CCCN2c3ccccc3Sc3ccc(cc23)C(F)(F)F)CC1
trifluoperazina
InChIKey=ZEWQUBUPAILYHI-UHFFFAOYAS
James Malone
A phenothiazine that has formula C21H24F3N3S.
trifluoperazine
trifluoromethyl-10-(3'-(1-methyl-4-piperazinyl)propyl)phenothiazine
A phenothiazine derivative having a trifluoromethyl subsitituent at the 2-position and a 3-(4-methylpiperazin-1-yl)propyl group at the N-10 position.
James Malone
dermatologic drugs
dermatologic drug
dermatological agent
http://www.ebi.ac.uk/efo/EFO_0001884
CHEBI:50177
dermatologic agent
A drug used to treat or prevent skin disorders or for the routine care of skin.
RGD:1582184
Dahl salt-resistant
James Malone
ZFS:0000039
larval day 7-13
James Malone
ZFS:0000023
segmentation 1-4 somites
James Malone
cervical neck region
James Malone
The outer layer of the adrenal gland. It secretes mineralocorticoids, androgens, and glucocorticoids. (MeSH)[accessedResource: NCIt:C12396][accessDate: 10-05-2010]
NCIt:C12396
BTO:0000045
Cortex of suprarenal gland
Cortex of adrenal gland[accessedResource: NCIt:C12396][accessDate: 10-05-2010]
Cortical[accessedResource: NCIt:C12396][accessDate: 10-05-2010]
EMAPA:18427
cortex glandulae suprarenalis
Cortical
James Malone
XAO:0000165
MA:0000118
The outer portion of the adrenal glands that produces several steroid hormones, including cortisol and aldosterone.[accessedResource: BTO:0000045][accessDate: 10-05-2010]
Cortex of adrenal gland
The outer portion of the adrenal glands that produces several steroid hormones, including cortisol and aldosterone.
adrenal cortex
MAT:0000494
suprarenal cortex
The outer layer of the adrenal gland. It secretes mineralocorticoids, androgens, and glucocorticoids. (MeSH)
suprarenal cortex[accessedResource: BTO:0000045][accessDate: 10-05-2010]
cortex glandulae suprarenalis[accessedResource: BTO:0000045][accessDate: 10-05-2010]
EV:0100136
MO_462
strain or line design
Tomasz Adamusiak
allergen
http://www.ebi.ac.uk/efo/EFO_0002398
allergenic agent
A role played by a chemical compound in the onset of allergic reaction and interacting with molecular pathways involved in allergy.
alergeno
Ele Holloway
allergene
James Malone
CHEBI:50904
pigment cell
MFO:0003360
pigment
AAO:0000430
NIFSTD:sao1231384859
MAT:0000159
http://www.ebi.ac.uk/efo/EFO_0000957
pigment cells[accessedResource: MAT:0000159][accessDate: 10-05-2010]
pigment cells
Tomasz Adamusiak
James Malone
ZFA:0009090
chromatophore
chromatophore[accessedResource: ZFA:0009090][accessDate: 10-05-2010]
chromatocyte[accessedResource: ZFA:0009090][accessDate: 10-05-2010]
pigment cell[accessedResource: ZFA:0009090][accessDate: 10-05-2010]
chromatocyte
pigmentation
pigmentation[accessedResource: MAT:0000159][accessDate: 10-05-2010]
DOID:14691
Benign pseudohypertrophic muscular dystrophy
Becker's muscular dystrophy
Tomasz Adamusiak
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158672&type=germplasm
CS57648 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158672&type=germplasm
CS57648
James Malone
CHEBI:50249
anticoagulants
anticoagulante
An agent that prevents blood clotting.
anticoagulant
http://www.ebi.ac.uk/efo/EFO_0001885
James Malone
GeneRIF:15581626
Ewing's Sarcoma/Peripheral Primitive Neuroectodermal Tumor[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
Tumors of the Ewing's Family
Ewing's Family of Tumours
NCIt:C4817
Ewing Family of Tumors[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms.
Ewings Tumor
A small round cell tumor that lacks morphologic, immunohistochemical, and electron microscopic evidence of neuroectodermal differentiation. It represents one of the two ends of the spectrum called Ewing's sarcoma/peripheral neuroectodermal tumor. It affects mostly males under age 20, and it can occur in soft tissue or bone. Pain and the presence of a mass are the most common clinical symptoms.[accessedResource: NCIt:C4817][accessDate: 10-05-2010]
DOID:3369
Ewing sarcoma
GeneRIF:12172985
Ewing Sarcoma/Peripheral Primitive Neuroectodermal Tumor[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
Ewing's tumour[accessedResource: SNOMEDCT:76909002][accessDate: 10-05-2010]
Ewing Tumor
Ewing Family of Tumors
GeneRIF:11956622
ES[accessedResource: NCIt:C4817][accessDate: 10-05-2010]
Ewing's Family of Tumors[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
GeneRIF:15282325
GeneRIF:11992404
Ewing's sarcoma
A malignant tumor of the bone which always arises in the medullary tissue, occurring more often in cylindrical bones. There are conspicuous foci of necrosis in association with irregular masses of small, regular, rounded or ovoid cells with very scanty cytoplasm. The tumor occurs usually before the age of 20, about twice as frequently in males as in females. (From Dorland, 27th ed; Stedman, 25th ed)
ES
GeneRIF:11313995
Ewing Tumor[accessedResource: MSH:D012512][accessDate: 10-05-2010]
Tumors of the Ewing's Family[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
MSH:D012512
GeneRIF:15919668
GeneRIF:12527902
Ewing's Family of Tumours[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
GeneRIF:15273724
NCIt:C27291
GeneRIF:14528100
Ewings sarcoma[accessedResource: DOID:3369][accessDate: 10-05-2010]
James Malone
GeneRIF:12447693
GeneRIF:12054564
Ewing Sarcoma/Peripheral Primitive Neuroectodermal Tumor
A malignant tumor of the bone which always arises in the medullary tissue, occurring more often in cylindrical bones. There are conspicuous foci of necrosis in association with irregular masses of small, regular, rounded or ovoid cells with very scanty cytoplasm. The tumor occurs usually before the age of 20, about twice as frequently in males as in females. (From Dorland, 27th ed; Stedman, 25th ed)[accessedResource: MSH:D012512][accessDate: 10-05-2010]
GeneRIF:12557222
GeneRIF:15044653
Tomasz Adamusiak
A small round cell tumor that lacks morphologic, immunohistochemical, and electron microscopic evidence of neuroectodermal differentiation. It represents one of the two ends of the spectrum called Ewing's sarcoma/peripheral neuroectodermal tumor. It affects mostly males under age 20, and it can occur in soft tissue or bone. Pain and the presence of a mass are the most common clinical symptoms.
Tumor, Ewing's[accessedResource: MSH:D012512][accessDate: 10-05-2010]
GeneRIF:15328192
Ewing's sarcoma (morphologic abnormality)
GeneRIF:15748890
GeneRIF:15310753
GeneRIF:15077162
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms. -- 2004
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms.[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
GeneRIF:14977835
Ewing's tumour
Ewing's sarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:76909002][accessDate: 10-05-2010]
Ewing's Sarcoma/Peripheral Primitive Neuroectodermal Tumor
Ewing's Family of Tumors
GeneRIF:12700668
SNOMEDCT:76909002
Obsolete: No longer required in EFO
true
NCIt:C22729
Bladder (MMHCC)
obsolete_bladder MMHCC
James Malone
ZFA:0000706
The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates.
colon
XAO:0000243
EV:0100079
SAEL:22
EMAPA:18939
FMAID:14543
The part of the large intestine measured from the cecum to the rectum consisting of ascending, transverse, descending and sigmoid portions. The purpose of the colon is to remove water from digested food prior to excretion.
The part of the large intestine that extends from the cecum to the rectum.[accessedResource: BTO:0000269][accessDate: 10-05-2010]
BTO:0000269
The part of the large intestine that extends from the cecum to the rectum.
James Malone
The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates.[accessedResource: ZFA:0000706][accessDate: 10-05-2010]
MA:0000335
MAP:0000001
James Malone
ZR7530
CROAP-2
CROAP2
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158807&type=germplasm
CS57783 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158807&type=germplasm
CS57783
James Malone
immune cell
leucocyte
leukocyte
James Malone
A nucleated cell of the myeloid or lymphoid lineages, found in blood or other tissue.[accessedResource: CL:0000738][accessDate: 10-05-2010]
use leukocyte EFO_0000566
CL:0000738
obsolete_white blood cell
leucocyte[accessedResource: CL:0000738][accessDate: 10-05-2010]
A nucleated cell of the myeloid or lymphoid lineages, found in blood or other tissue.
white blood cell
true
leukocyte[accessedResource: CL:0000738][accessDate: 10-05-2010]
white blood cell[accessedResource: CL:0000738][accessDate: 10-05-2010]
immune cell[accessedResource: CL:0000738][accessDate: 10-05-2010]
NCIH1048
James Malone
Ele Holloway
MO_485
dose response design
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158584&type=germplasm
CS57560 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158584&type=germplasm
CS57560
James Malone
H0287 is a cell line derived from normal lymphoblastoid cells
H0287
colon ascendens
EV:0100450
Organ part which is continuous with the cecum proximally and the transverse colon distally.
colon ascendens[accessedResource: BTO:0000270][accessDate: 10-05-2010]
FMAID:14545
The portion of the colon between the cecum and the right colic flexure.[accessedResource: BTO:0000270][accessDate: 10-05-2010]
ascending colon
Organ part which is continuous with the cecum proximally and the transverse colon distally.[accessedResource: FMAID:14545][accessDate: 10-05-2010]
James Malone
The portion of the colon between the cecum and the right colic flexure.
BTO:0000270
MAT:0000311
NCIH1437
James Malone
Ele Holloway
C32TG
James Malone
Ele Holloway
CCCCC\\C=C/C\\C=C/C\\C=C/C\\C=C/CCCC(=O)C(F)(F)F
Arachidonyltrifluoromethane
C21H31F3O
An organofluorine compound that has formula C21H31F3O.
Arachidonic acid trifluoromethyl ketone
http://www.ebi.ac.uk/efo/EFO_0001476
Arachidonyl trifluoromethyl ketone
James Malone
CHEBI:2341
AACOCF3
(6Z,9Z,12Z,15Z)-1,1,1-trifluorohenicosa-6,9,12,15-tetraen-2-one
InChI=1/C21H31F3O/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20(25)21(22,23)24/h6-7,9-10,12-13,15-16H,2-5,8,11,14,17-19H2,1H3/b7-6-,10-9-,13-12-,16-15-
InChIKey=PLWROONZUDKYKG-DOFZRALJBM
lung endoderm
Tomasz Adamusiak
Jie Zheng
Calu3
James Malone
Ele Holloway
A moderately malignant neoplasm composed of primitive neuroectodermal cells dispersed in myxomatous or fibrous stroma intermixed with mature ganglion cells. It may undergo transformation into a neuroblastoma. It arises from the sympathetic trunk or less frequently from the adrenal medulla, cerebral cortex, and other locations. Cervical ganglioneuroblastomas may be associated with HORNER SYNDROME and the tumor may occasionally secrete vasoactive intestinal peptide, resulting in chronic diarrhea.[accessedResource: MSH:D018305][accessDate: 10-05-2010]
James Malone
NIFSTD:birnlex_12633
Ganglioneuroblastomas[accessedResource: MSH:D018305][accessDate: 10-05-2010]
Ganglioneuroblastoma (morphologic abnormality)
A neuroblastic tumor characterized by the presence of neuroblastic cells, ganglion cells, and a stroma with Schwannian differentiation constituting more than fifty-percent of the tumor volume. There are two histologic subtypes identified: ganglioneuroblastoma, intermixed and ganglioneuroblastoma, nodular.
NCIt:C3790
A neuroblastic tumor characterized by the presence of neuroblastic cells, ganglion cells, and a stroma with Schwannian differentiation constituting more than fifty-percent of the tumor volume. There are two histologic subtypes identified: ganglioneuroblastoma, intermixed and ganglioneuroblastoma, nodular.[accessedResource: NCIt:C3790][accessDate: 10-05-2010]
A moderately malignant neoplasm composed of primitive neuroectodermal cells dispersed in myxomatous or fibrous stroma intermixed with mature ganglion cells. It may undergo transformation into a neuroblastoma. It arises from the sympathetic trunk or less frequently from the adrenal medulla, cerebral cortex, and other locations. Cervical ganglioneuroblastomas may be associated with HORNER SYNDROME and the tumor may occasionally secrete vasoactive intestinal peptide, resulting in chronic diarrhea (MeSH).
Ganglioneuroblastoma (morphologic abnormality)[accessedResource: SNOMEDCT:69515008][accessDate: 10-05-2010]
GeneRIF:12185600
A moderately malignant neoplasm composed of primitive neuroectodermal cells dispersed in myxomatous or fibrous stroma intermixed with mature ganglion cells. It may undergo transformation into a neuroblastoma. It arises from the sympathetic trunk or less frequently from the adrenal medulla, cerebral cortex, and other locations. Cervical ganglioneuroblastomas may be associated with HORNER SYNDROME and the tumor may occasionally secrete vasoactive intestinal peptide, resulting in chronic diarrhea (MeSH).[accessedResource: NIFSTD:birnlex_12633][accessDate: 10-05-2010]
A neuroblastic tumor characterized by the presence of neuroblastic cells, ganglion cells, and a stroma with Schwannian differentiation constituting more than fifty-percent of the tumor volume. There are two histologic subtypes identified: ganglioneuroblastoma, intermixed and ganglioneuroblastoma, and nodular.
ganglioneuroblastoma
A moderately malignant neoplasm composed of primitive neuroectodermal cells dispersed in myxomatous or fibrous stroma intermixed with mature ganglion cells. It may undergo transformation into a neuroblastoma. It arises from the sympathetic trunk or less frequently from the adrenal medulla, cerebral cortex, and other locations. Cervical ganglioneuroblastomas may be associated with HORNER SYNDROME and the tumor may occasionally secrete vasoactive intestinal peptide, resulting in chronic diarrhea.
MSH:D018305
Ganglioneuroblastomas
DOID:4163
SNOMEDCT:69515008
Tomasz Adamusiak
true
ppm
A dimensionless concentration notation which denotes the amount of a given substance in a total amount of 1,000,000 regardless of the units of measure used as long as they are the same or 1 part in 10^[6].
parts per million
RL952
James Malone
Ele Holloway
whole organism
MO_841
organism status design
Tomasz Adamusiak
NCI-N87
James Malone
Ele Holloway
birn_anat:birnlex_1362
MA:0000951
hippocampus CA2
Tomasz Adamusiak
Plotnikova, J. M., Rahme, L. G., Ausubel, F. M. (2000). Pathogenesis of the Human Opportunistic Pathogen Pseudomonas aeruginosa PA14 in Arabidopsis. Plant Physiol. 124: 1766-1774
A Pseudomonas aeruginosa PA14 infection is a Pseudomonas infection of strain PA14.
Pseudomonas aeruginosa PA14 infection
James Malone
NCIH2347
James Malone
Ele Holloway
NCI Thesaurus:C25742
The state or condition of having a developing embryo or fetus in the body (uterus), after union of an ovum and spermatozoon, during the period from conception to birth.
pregnancy
nongranular leukocyte[accessedResource: BTO:0000876][accessDate: 10-05-2010]
Myeloid mononuclear recirculating leukocyte that can act as a precursor of tissue macrophages, osteoclasts and some populations of tissue dendritic cells.
monocyte
A mononuclear phagocytic leukocyte, 13 to 25 mm in diameter, with an ovoid or kidney-shaped nucleus, containing lacy, linear chromatin and abundant gray-blue cytoplasm filled with fine reddish and azurophilic granules. Formed in the bone marrow from promonocytes, monocytes are transported to tissues such as the lung and liver, where they develop into macrophages.
CL:0000576
Myeloid mononuclear recirculating leukocyte that can act as a precursor of tissue macrophages, osteoclasts and some populations of tissue dendritic cells.[accessedResource: CL:0000576][accessDate: 10-05-2010]
nongranular leukocyte
A mononuclear phagocytic leukocyte, 13 to 25 mm in diameter, with an ovoid or kidney-shaped nucleus, containing lacy, linear chromatin and abundant gray-blue cytoplasm filled with fine reddish and azurophilic granules. Formed in the bone marrow from promonocytes, monocytes are transported to tissues such as the lung and liver, where they develop into macrophages.[accessedResource: BTO:0000876][accessDate: 10-05-2010]
mononuclear leukocyte[accessedResource: BTO:0000876][accessDate: 10-05-2010]
BTO:0000876
James Malone
mononuclear leukocyte
Celiac disease (disorder)[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
GeneRIF:12559633
GeneRIF:11869041
ICD9:579.0
GeneRIF:15617864
GeneRIF:11908704
Coeliac disease[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
Celiac Sprue[accessedResource: NCIt:C26714][accessDate: 10-05-2010]
Coeliac sprue[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
GeneRIF:14991945
CS - Coeliac sprue[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
CS - Celiac sprue
Coeliac syndrome
Wheat-sensitive enteropathy
Coeliac disease
NCIt:C26714
Gluten-Induced Enteropathy[accessedResource: NCIt:C26714][accessDate: 10-05-2010]
SNOMEDCT:396331005
GeneRIF:12959221
Celiac disease (disorder)
Celiac disease NOS[accessedResource: SNOMEDCT:197481005][accessDate: 10-05-2010]
Celiac syndrome[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
GeneRIF:15657618
GeneRIF:15826953
GeneRIF:12439623
Nontropical Sprue
James Malone
A malabsorption syndrome that is precipitated by the ingestion of GLUTEN-containing foods, such as wheat, rye, and barley. It is characterized by INFLAMMATION of the SMALL INTESTINE, loss of MICROVILLI structure, failed INTESTINAL ABSORPTION, and MALNUTRITION.[accessedResource: MSH:D002446][accessDate: 10-05-2010]
GeneRIF:12743709
Sprue
Celiac disease NOS (disorder)[accessedResource: SNOMEDCT:197481005][accessDate: 10-05-2010]
Coeliac disease [Ambiguous][accessedResource: DOID:10608][accessDate: 10-05-2010]
Celiac syndrome
Enteropathies, Gluten
Idiopathic steatorrhoea[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
GeneRIF:12759242
Celiac rickets (disorder)[accessedResource: SNOMEDCT:275404008][accessDate: 10-05-2010]
GeneRIF:16026592
Coeliac disease NOS
CD - Coeliac disease[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
GeneRIF:15215891
CD - Celiac disease
GeneRIF:15174785
CELIAC DIS
CD - Celiac disease[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
celiac disease
Celiac rickets[accessedResource: SNOMEDCT:275404008][accessDate: 10-05-2010]
Non-tropical sprue
Enteropathies, Gluten-Sensitive[accessedResource: MSH:D002446][accessDate: 10-05-2010]
Gluten-induced enteropathy syndrome[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
Sprue, Nontropical[accessedResource: MSH:D002446][accessDate: 10-05-2010]
GeneRIF:12074713
Celiac rickets (disorder)
GeneRIF:11972887
GeneRIF:12410804
GeneRIF:16285941
Coeliac disease NOS[accessedResource: SNOMEDCT:197481005][accessDate: 10-05-2010]
Enteropathies, Gluten[accessedResource: MSH:D002446][accessDate: 10-05-2010]
GeneRIF:15645196
GeneRIF:15324937
DOID:10608
Coeliac rickets
SNOMEDCT:275404008
Idiopathic steatorrhoea
Enteropathy, Gluten-Sensitive
Idiopathic steatorrhea[accessedResource: DOID:10608][accessDate: 10-05-2010]
GeneRIF:12755416
Wheat-sensitive enteropathy[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
MSH:D002446
Non-tropical sprue[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
GeneRIF:11826026
GSE - Gluten-sensitive enteropathy[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
GeneRIF:12093810
GeneRIF:12788988
Gluten-Induced Enteropathy
GeneRIF:14675396
Gluten-Sensitive Enteropathies
GSE - Gluten-sensitive enteropathy
CS - Celiac sprue[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
GeneRIF:16112033
Gluten-induced enteropathy syndrome
GeneRIF:12675238
GeneRIF:12732349
Idiopathic steatorrhea
GeneRIF:12039527
Celiac disease NOS
Gluten enteropathy
Coeliac syndrome[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
Celiac disease NOS (disorder)
Gluten-sensitive enteropathy[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
CELIAC DIS[accessedResource: MSH:D002446][accessDate: 10-05-2010]
Celiac rickets
Coeliac disease [Ambiguous]
Coeliac rickets[accessedResource: SNOMEDCT:275404008][accessDate: 10-05-2010]
Coeliac sprue
Sprue[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
GeneRIF:15746535
Gluten-responsive sprue
Gluten Enteropathy[accessedResource: MSH:D002446][accessDate: 10-05-2010]
GeneRIF:12542746
CS - Coeliac sprue
GeneRIF:12421937
GeneRIF:15120190
CD - Coeliac disease
GeneRIF:12698366
SNOMEDCT:197481005
celiac sprue
A malabsorption syndrome that is precipitated by the ingestion of GLUTEN-containing foods, such as wheat, rye, and barley. It is characterized by INFLAMMATION of the SMALL INTESTINE, loss of MICROVILLI structure, failed INTESTINAL ABSORPTION, and MALNUTRITION.
Gluten-responsive sprue[accessedResource: SNOMEDCT:396331005][accessDate: 10-05-2010]
SW1573
James Malone
Ele Holloway
A thick muscle in the cheek that closes the jaws during chewing.
Muscles arising in the zygomatic arch that close the jaw. (MeSH)
James Malone
masseter
Masticatory Muscles[accessedResource: NCIt:C13074][accessDate: 10-05-2010]
A thick muscle in the cheek that closes the jaws during chewing.[accessedResource: BTO:0001755][accessDate: 10-05-2010]
Muscles arising in the zygomatic arch that close the jaw. (MeSH)[accessedResource: NCIt:C13074][accessDate: 10-05-2010]
BTO:0001755
masseter[accessedResource: BTO:0001755][accessDate: 10-05-2010]
Masticatory Muscle[accessedResource: NCIt:C13074][accessDate: 10-05-2010]
Masticatory Muscle
NCIt:C13074
masseter muscle
Masticatory Muscles
The quality of an organism that has never been sexually active.
virgin
HuPT4
James Malone
Ele Holloway
http://jaxmice.jax.org/strain/009323.html
ILSXISS112/TejJ
Tomasz Adamusiak
http://jaxmice.jax.org/strain/009281.html
ILSXISS89/TejJ
Tomasz Adamusiak
James Malone
MRC5 cell[accessedResource: BTO:0001590][accessDate: 10-05-2010]
Homo sapiens (human) lung; fibroblast; normal cell line. The MRC-5 cell line was derived from normal lung tissue of a 14-week-old male fetus by J.P. Jacobs in September of 1966.[accessedResource: BTO:0001590][accessDate: 10-05-2010]
MRC-5 cell[accessedResource: BTO:0001590][accessDate: 10-05-2010]
BTO:0001590
Ele Holloway
MRC-5 cell
MRC5 cell
Homo sapiens (human) lung; fibroblast; normal cell line. The MRC-5 cell line was derived from normal lung tissue of a 14-week-old male fetus by J.P. Jacobs in September of 1966.
MRC5
MRC-5
The development of the mushroom body proceeds as follows: Axonogenesis of embryonic Kenyon cells starts late in embryonic stage 14. The axons from these cells extend towards the lateral proto-cerebral tract (LTP). During stage 16, a second set of kenyon cell fibres form a second tract, closely apposed to the first. By late stage 16, both tracts extend anteriorly beyond the LTP to form the distal part of the peduncle. These tracts make a sharp medial turn close to the boundary with the deutocerebrum to form the medial lobe. By late stage 17 the dorsal lobe has emerged as a collateral outgrowth from the point where these tracts bend. Finally, the calyx forms near to the end of embryogenesis.
FBbt:00005508
embryonic central brain mushroom body
Embryonic structure from which the mushroom body is derived. The development of the mushroom body proceeds as follows: Axonogenesis of embryonic Kenyon cells starts late in embryonic stage 14. The axons from these cells extend towards the lateral protocerebral tract (LTP). During stage 16, a second set of Kenyon cell fibers form a second tract, closely apposed to the first. By late stage 16, both tracts extend anteriorly beyond the LTP to form the distal part of the peduncle. These tracts make a sharp medial turn close to the boundary with the deutocerebrum to form the medial lobe. By late stage 17 the dorsal lobe has emerged as a collateral outgrowth from the point where these tracts bend. Finally, the calyx forms near to the end of embryogenesis.[accessedResource: FBbt:00005508][accessDate: 10-05-2010]
mushroom body primordium[accessedResource: FBbt:00005508][accessDate: 10-05-2010]
Embryonic structure from which the mushroom body is derived. The development of the mushroom body proceeds as follows: Axonogenesis of embryonic Kenyon cells starts late in embryonic stage 14. The axons from these cells extend towards the lateral protocerebral tract (LTP). During stage 16, a second set of Kenyon cell fibers form a second tract, closely apposed to the first. By late stage 16, both tracts extend anteriorly beyond the LTP to form the distal part of the peduncle. These tracts make a sharp medial turn close to the boundary with the deutocerebrum to form the medial lobe. By late stage 17 the dorsal lobe has emerged as a collateral outgrowth from the point where these tracts bend. Finally, the calyx forms near to the end of embryogenesis.
James Malone
mushroom body primordium
mRNA
messenger RNA
Primary visual cortex[accessedResource: FMAID:236871][accessDate: 10-05-2010]
Striate cortex
visual cortex
Primary visual cortex
striate cortex[accessedResource: MAT:0000509][accessDate: 10-05-2010]
MAT:0000509
The area of the occipital lobe of the cerebral cortex concerned with vision; it consists of the first visual area or striate c. (Brodmann's area 17) and two other areas, the second visual area or parastriate area (Brodmann's area 18) and the third visual area or peristriate area (Brodmann's area 19).[accessedResource: BTO:0001857][accessDate: 10-05-2010]
MA:0000914
BTO:0001857
EV:0100469
FMAID:236871
The area of the occipital lobe of the cerebral cortex concerned with vision; it consists of the first visual area or striate c. (Brodmann's area 17) and two other areas, the second visual area or parastriate area (Brodmann's area 18) and the third visual area or peristriate area (Brodmann's area 19).
James Malone
Tylenol
p-acetamidophenol
p-hydroxyacetanilide
Acetaminophen
paracetamol
N-acetyl-p-aminophenol
p-Acetylaminophenol
InChI=1/C8H9NO2/c1-6(10)9-7-2-4-8(11)5-3-7/h2-5,11H,1H3,(H,9,10)/f/h9H
acetaminophene
paracetamolum
N-(4-hydroxyphenyl)acetamide
http://www.ebi.ac.uk/efo/EFO_0001589
C8H9NO2
4'-hydroxyacetanilide
Acetaminofen
InChIKey=RZVAJINKPMORJF-BGGKNDAXCW
An acetamide that has formula C8H9NO2.
p-acetaminophenol
4-(Acetylamino)phenol
CHEBI:46195
A derivative of phenol which has an acetamido substituent located para to the phenolic -OH group.
James Malone
Acenol
4-acetamidophenol
CC(=O)Nc1ccc(O)cc1
APAP
p-hydroxyphenolacetamide
A204
James Malone
Ele Holloway
Progressive muscular dystrophy
GeneRIF:14741210
Myodystrophica
GeneRIF:12654965
GeneRIF:12091319
MD - Muscular dystrophy[accessedResource: SNOMEDCT:73297009][accessDate: 10-05-2010]
Hereditary progressive muscular dystrophy NOS (disorder)
Muscular Dystrophies[accessedResource: MSH:D009136][accessDate: 10-05-2010]
Muscular dystrophy NOS[accessedResource: DOID:9884][accessDate: 10-05-2010]
GeneRIF:12798793
Myodystrophicas
GeneRIF:16115818
MSH:D009136
GeneRIF:12011280
GeneRIF:12609503
GeneRIF:12145747
MD - Muscular dystrophy
PMD - Progressive muscular dystrophy[accessedResource: SNOMEDCT:73297009][accessDate: 10-05-2010]
Progressive muscular dystrophy[accessedResource: SNOMEDCT:73297009][accessDate: 10-05-2010]
GeneRIF:12657835
GeneRIF:15221789
GeneRIF:15371336
ICD9:359.1
Myodystrophies[accessedResource: MSH:D009136][accessDate: 10-05-2010]
GeneRIF:16286249
GeneRIF:16130093
Hereditary progressive muscular dystrophy, NOS[accessedResource: DOID:9884][accessDate: 10-05-2010]
GeneRIF:12189167
HERED PROG MUSC DYSTRPHY[accessedResource: ICD9:359.1][accessDate: 10-05-2010]
HERED PROG MUSC DYSTRPHY
GeneRIF:12783988
A heterogeneous group of inherited MYOPATHIES, characterized by wasting and weakness of the SKELETAL MUSCLE. They are categorized by the sites of MUSCLE WEAKNESS; AGE OF ONSET; and INHERITANCE PATTERNS.
Hereditary progressive muscular dystrophy[accessedResource: DOID:9884][accessDate: 10-05-2010]
GeneRIF:16098969
GeneRIF:15833432
GeneRIF:15848172
Myodystrophies
Muscular dystrophy NOS
GeneRIF:14652796
PMD - Progressive muscular dystrophy
James Malone
GeneRIF:12387816
SNOMEDCT:193236007
Hereditary progressive muscular dystrophy
Muscular dystrophy (disorder)
Myodystrophicas[accessedResource: MSH:D009136][accessDate: 10-05-2010]
Myodystrophica[accessedResource: MSH:D009136][accessDate: 10-05-2010]
GeneRIF:12736685
Hereditary progressive muscular dystrophy (disorder)[accessedResource: DOID:9884][accessDate: 10-05-2010]
Myodystrophy[accessedResource: MSH:D009136][accessDate: 10-05-2010]
GeneRIF:11792810
muscular dystrophy
Hereditary progressive muscular dystrophy NOS
DOID:9884
GeneRIF:15668457
GeneRIF:12196663
GeneRIF:12192640
GeneRIF:12057917
SNOMEDCT:193225000
GeneRIF:14985349
Muscular Dystrophies
SNOMEDCT:73297009
GeneRIF:14512171
Myodystrophy
GeneRIF:16084089
GeneRIF:15365169
A heterogeneous group of inherited MYOPATHIES, characterized by wasting and weakness of the SKELETAL MUSCLE. They are categorized by the sites of MUSCLE WEAKNESS; AGE OF ONSET; and INHERITANCE PATTERNS.[accessedResource: MSH:D009136][accessDate: 10-05-2010]
Muscular dystrophy (disorder)[accessedResource: DOID:9884][accessDate: 10-05-2010]
GeneRIF:11829483
Hereditary progressive muscular dystrophy (disorder)
Hereditary progressive muscular dystrophy NOS (disorder)[accessedResource: SNOMEDCT:193236007][accessDate: 10-05-2010]
GeneRIF:12609502
http://www.ebi.ac.uk/efo/EFO_0002646
"Mus castaneus"
James Malone
"Mus casteneus"
Mus musculus castaneus
"Mus musculus castenus"
southeast Asian house mouse
"southeastern Asian house mouse"
1.5
true
obsolete_B-precursor acute lymphoblastic leukemia
James Malone
Duplicate with B-cell acute lymphoblastic leukemia (EFO_0000094) use this instead
A dermal neurofibroma is a neurofibroma that occurs in situ of the skin.
dermal neurofibroma
James Malone
FBbt:00005568
embryonic antennal sense organ
James Malone
FBbt:00005159
taste system
Gustatory system[accessedResource: FMAID:7194][accessDate: 10-05-2010]
Any sense organ (FBbt:00005155) that has function 'detection of chemical stimulus involved in sensory perception of taste (GO:0050912)'.
MAT:0000275
gustatory sensory organ
Any sense organ (FBbt:00005155) that functions in (some) detection of chemical stimulus involved in sensory perception of taste (GO:0050912).
gustatory sensory organ[accessedResource: MAT:0000275][accessDate: 10-05-2010]
Gustatory organ system[accessedResource: FMAID:7194][accessDate: 10-05-2010]
ZFA:0001101
James Malone
gustatory system
FMAID:7194
Any sense organ (FBbt:00005155) that functions in (some) detection of chemical stimulus involved in sensory perception of taste (GO:0050912).[accessedResource: FBbt:00005159][accessDate: 10-05-2010]
Gustatory organ system
TAO:0001101
MO_892
development or differentiation design
Tomasz Adamusiak
zebrafish cell line
TADS:0000245
BTO:0002106
A system of neurons that has the specialized function to produce and secrete hormones, and that constitutes, in whole or in part, an endocrine organ or system.
A system of neurons that has the specialized function to produce and secrete hormones, and that constitutes, in whole or in part, an endocrine organ or system.[accessedResource: BTO:0002106][accessDate: 10-05-2010]
neurohemal organ
James Malone
leaf vascular tissue
James Malone
WM793
James Malone
Ele Holloway
ZFS:0000040
larval day 14-20
James Malone
Mature contractile cells, commonly known as myocytes, that form one of three kinds of muscle. The three types of muscle cells are skeletal (muscle fibers), cardiac (myocytes, cardiac), and smooth (myocytes, smooth muscle). They are derived from embryonic (precursor) muscle cells called myoblasts (MSH).[accessedResource: NIFSTD:sao519252327][accessDate: 10-05-2010]
CL:0000187
myocyte
NIFSTD:sao519252327
A mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle.[accessedResource: CL:0000187][accessDate: 10-05-2010]
Tomasz Adamusiak
James Malone
A mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle.
muscle cell
Mature contractile cells, commonly known as myocytes, that form one of three kinds of muscle. The three types of muscle cells are skeletal (muscle fibers), cardiac (myocytes, cardiac), and smooth (myocytes, smooth muscle). They are derived from embryonic (precursor) muscle cells called myoblasts (MSH).
myocyte[accessedResource: CL:0000187][accessDate: 10-05-2010]
http://www.arabidopsis.org/servlets/TairObject?id=1005158741&type=germplasm
CS57717 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158741&type=germplasm
CS57717
James Malone
GeneRIF:12839562
GeneRIF:15833746
GeneRIF:15855645
GeneRIF:12858451
GeneRIF:12618866
GeneRIF:16109415
GeneRIF:16098034
GeneRIF:12847692
MSH:D012595
SNOMEDCT:89155008
Systemic sclerosis (disorder)[accessedResource: SNOMEDCT:89155008][accessDate: 10-05-2010]
Scleroderma syndrome
GeneRIF:12757775
SS - Systemic sclerosis
GeneRIF:15797863
GeneRIF:15654958
GeneRIF:15247510
Scleroderma
GeneRIF:12888869
GeneRIF:12777465
Scleroderma (& [systemic sclerosis])
Systemic sclerosis (disorder)
GeneRIF:14764526
GeneRIF:14662895
systemic scleroderma
GeneRIF:15471851
GeneRIF:16025105
GeneRIF:15500643
PSS - Progressive systemic sclerosis
GeneRIF:15722417
GeneRIF:12609057
A chronic multi-system disorder of CONNECTIVE TISSUE. It is characterized by SCLEROSIS in the SKIN, the LUNGS, the HEART, the GASTROINTESTINAL TRACT, the KIDNEYS, and the MUSCULOSKELETAL SYSTEM. Other important features include diseased small BLOOD VESSELS and AUTOANTIBODIES. The disorder is named for its most prominent feature (hard skin), and classified into subsets by the extent of skin thickening: LIMITED SCLERODERMA and DIFFUSE SCLERODERMA.[accessedResource: MSH:D012595][accessDate: 10-05-2010]
GeneRIF:15468358
GeneRIF:12692352
GeneRIF:12528118
GeneRIF:15068249
GeneRIF:12493731
GeneRIF:15345711
GeneRIF:16081813
GeneRIF:14872500
GeneRIF:15110723
GeneRIF:16112028
GeneRIF:14729510
GeneRIF:16081426
ICD9:710.1
GeneRIF:11904440
PSS (progressive systemic sclerosis)[accessedResource: DOID:418][accessDate: 10-05-2010]
GeneRIF:12233882
GeneRIF:12847691
James Malone
GeneRIF:12508774
Thibierge-Weissenbach syndrome[accessedResource: SNOMEDCT:89155008][accessDate: 10-05-2010]
GeneRIF:15641797
GeneRIF:14730633
GeneRIF:15593213
GeneRIF:14722617
GeneRIF:15215176
progressive systemic sclerosis
GeneRIF:14730619
GeneRIF:12843267
GeneRIF:15149850
SS - Systemic sclerosis[accessedResource: SNOMEDCT:89155008][accessDate: 10-05-2010]
GeneRIF:12015245
GeneRIF:11796184
GeneRIF:15818662
GeneRIF:14705224
GeneRIF:16049784
GeneRIF:12388554
Scleroderma[accessedResource: SNOMEDCT:89155008][accessDate: 10-05-2010]
GeneRIF:12925209
systemic sclerosis[accessedResource: DOID:418][accessDate: 10-05-2010]
GeneRIF:12374741
DOID:418
GeneRIF:15622541
GeneRIF:12009077
A chronic multi-system disorder of CONNECTIVE TISSUE. It is characterized by SCLEROSIS in the SKIN, the LUNGS, the HEART, the GASTROINTESTINAL TRACT, the KIDNEYS, and the MUSCULOSKELETAL SYSTEM. Other important features include diseased small BLOOD VESSELS and AUTOANTIBODIES. The disorder is named for its most prominent feature (hard skin), and classified into subsets by the extent of skin thickening: LIMITED SCLERODERMA and DIFFUSE SCLERODERMA.
GeneRIF:12007723
Scleroderma (& [systemic sclerosis])[accessedResource: DOID:418][accessDate: 10-05-2010]
Progressive systemic sclerosis[accessedResource: SNOMEDCT:89155008][accessDate: 10-05-2010]
Scleroderma syndrome[accessedResource: DOID:418][accessDate: 10-05-2010]
GeneRIF:15896720
Thibierge-Weissenbach syndrome
GeneRIF:15146426
GeneRIF:12629514
GeneRIF:12784398
GeneRIF:14613297
GeneRIF:12091308
Sclerosis, Systemic
GeneRIF:12913118
GeneRIF:12528119
GeneRIF:14705223
GeneRIF:14613485
GeneRIF:15146427
[X]Dermatopolymyositis, unspecified[accessedResource: SNOMEDCT:203795006][accessDate: 10-05-2010]
SNOMEDCT:396230008
James Malone
Dermatomyositis, Childhood Type
Dermatopolymyositis, unspecified
Dermatopolymyositis, unspecified[accessedResource: DOID:10223][accessDate: 10-05-2010]
Polymyositis-Dermatomyositides
A subacute or chronic inflammatory disease of muscle and skin, marked by proximal muscle weakness and a characteristic skin rash. The illness occurs with approximately equal frequency in children and adults. The skin lesions usually take the form of a purplish rash (or less often an exfoliative dermatitis) involving the nose, cheeks, forehead, upper trunk, and arms. The disease is associated with a complement mediated intramuscular microangiopathy, leading to loss of capillaries, muscle ischemia, muscle-fiber necrosis, and perifascicular atrophy. The childhood form of this disease tends to evolve into a systemic vasculitis. Dermatomyositis may occur in association with malignant neoplasms. (From Adams et al., Principles of Neurology, 6th ed, pp1405-6)
[X]Dermatopolymyositis, unspecified (disorder)[accessedResource: SNOMEDCT:203795006][accessDate: 10-05-2010]
Polymyositis-Dermatomyositides[accessedResource: MSH:D003882][accessDate: 10-05-2010]
Dermatomyositis (disorder)
Adult Type Dermatomyositides
GeneRIF:16097959
Adult Type Dermatomyositis
GeneRIF:15146429
Adult Type Dermatomyositis[accessedResource: MSH:D003882][accessDate: 10-05-2010]
Polymyositis Dermatomyositis[accessedResource: MSH:D003882][accessDate: 10-05-2010]
ICD9:710.3
Dermatomyositides, Childhood Type
Dermatomyositis, Childhood Type[accessedResource: MSH:D003882][accessDate: 10-05-2010]
Dermatomyositides
GeneRIF:15752564
Dermatopolymyositides
Polymyositis with skin involvement[accessedResource: DOID:10223][accessDate: 10-05-2010]
Wagner-Unverricht syndrome
Dermatopolymyositides[accessedResource: MSH:D003882][accessDate: 10-05-2010]
dermatomyositis
Dermatomyositides[accessedResource: MSH:D003882][accessDate: 10-05-2010]
NCIt:C26744
MSH:D003882
Childhood Type Dermatomyositides[accessedResource: MSH:D003882][accessDate: 10-05-2010]
Wagner-Unverricht syndrome[accessedResource: SNOMEDCT:396230008][accessDate: 10-05-2010]
Dermatomyositides, Adult Type[accessedResource: MSH:D003882][accessDate: 10-05-2010]
A subacute or chronic inflammatory disease of muscle and skin, marked by proximal muscle weakness and a characteristic skin rash. The illness occurs with approximately equal frequency in children and adults. The skin lesions usually take the form of a purplish rash (or less often an exfoliative dermatitis) involving the nose, cheeks, forehead, upper trunk, and arms. The disease is associated with a complement mediated intramuscular microangiopathy, leading to loss of capillaries, muscle ischemia, muscle-fiber necrosis, and perifascicular atrophy. The childhood form of this disease tends to evolve into a systemic vasculitis. Dermatomyositis may occur in association with malignant neoplasms. (From Adams et al., Principles of Neurology, 6th ed, pp1405-6)[accessedResource: MSH:D003882][accessDate: 10-05-2010]
[X]Dermatopolymyositis, unspecified
SNOMEDCT:203795006
GeneRIF:16047841
GeneRIF:14631123
Dermatopolymyositis, unspecified (disorder)
DOID:10223
Dermatopolymyositis
DM - Dermatomyositis
Dermatomyositis (disorder)[accessedResource: DOID:10223][accessDate: 10-05-2010]
Dermatopolymyositis, unspecified (disorder)[accessedResource: DOID:10223][accessDate: 10-05-2010]
Polymyositis with skin involvement
GeneRIF:12147628
[X]Dermatopolymyositis, unspecified (disorder)
DM - Dermatomyositis[accessedResource: SNOMEDCT:396230008][accessDate: 10-05-2010]
Polymyositis Dermatomyositis
Dermatopolymyositis[accessedResource: MSH:D003882][accessDate: 10-05-2010]
Astrogliomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Duplicate with astrocytic tumor (EFO_0000272)
Astrocytoma, Cerebral[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12829373
GeneRIF:14729615
Astrocytoma, Anaplastic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytic tumour of brain
Astrocytoma, Intracranial
Intracranial Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytomas, Cerebral
Astrocytoma of brain[accessedResource: SNOMEDCT:254938000][accessDate: 10-05-2010]
GeneRIF:12023424
Astroglioma
Fibrillary Astrocytoma
Oligoastrocytomas, Mixed
Astrocytomas, Intracranial
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation. (From Devita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2013-7; Holland et al., Cancer Medicine, 3d ed, p1082)[accessedResource: MSH:D001254][accessDate: 10-05-2010]
true
astrocytoma of brain (disorder)
Astrocytoma, low grade[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
GeneRIF:15494521
Astrocytomas, Gemistocytic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Diffuse astrocytoma[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Astrocytomas, Protoplasmic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Pilocytic Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:14654927
Astrocytoma, no ICD-O subtype[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Astrocytoma, Grade I
Subependymal Giant Cell Astrocytoma
Astrocytic tumour of brain[accessedResource: SNOMEDCT:254938000][accessDate: 10-05-2010]
Astrocytoma, Protoplasmic
astrocytoma of brain (disorder)[accessedResource: DOID:3069][accessDate: 10-05-2010]
astroglioma[accessedResource: DOID:3069][accessDate: 10-05-2010]
Pilocytic Astrocytomas
Glioma, Astrocytic
Pilocytic Astrocytoma, Juvenile
astrocytoma[accessedResource: DOID:3069][accessDate: 10-05-2010]
Childhood Cerebral Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12740910
Intracranial Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytomas, Grade I
Juvenile Pilocytic Astrocytomas
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation. (From Devita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2013-7; Holland et al., Cancer Medicine, 3d ed, p1082)
Astrocytomas, Grade II[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:15652402
GeneRIF:14603438
Astrocytic Neoplasm
Astrocytoma, Juvenile Pilocytic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma, Gemistocytic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Pilocytic Astrocytomas, Juvenile[accessedResource: MSH:D001254][accessDate: 10-05-2010]
A glial tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, subependymal giant cell astrocytoma, and glioblastoma.[accessedResource: NCIt:C6958][accessDate: 10-05-2010]
Oligoastrocytomas, Mixed[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma of brain
Astrocytomas, Childhood Cerebral[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma, Grade II
Astrocytoma, NOS[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Gemistocytic Astrocytomas
Astrocytoma, no ICD-O subtype (morphologic abnormality)
GeneRIF:11922706
Oligoastrocytoma, Mixed[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytic glioma[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Cerebral Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma, NOS
Mixed Oligoastrocytoma
Cerebral Astrocytomas, Childhood
GeneRIF:12237771
Cystic astrocytoma[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
[M]Astrocytoma NOS
Astrocytic tumor of brain[accessedResource: SNOMEDCT:254938000][accessDate: 10-05-2010]
Grade III Astrocytomas
GeneRIF:15643521
DOID:3069
astrocytoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:3069][accessDate: 10-05-2010]
Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Fibrillary Astrocytomas
Cerebral Astrocytoma
A glial tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, subependymal giant cell astrocytoma, and glioblastoma.
GeneRIF:12850541
GeneRIF:15973775
MSH:D001254
SNOMEDCT:38713004
[M]Astrocytoma NOS[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
GeneRIF:12203396
SNOMEDCT:254938000
GeneRIF:12916719
Protoplasmic Astrocytomas
Astrocytomas, Anaplastic
Astrogliomas
GeneRIF:12819022
Astrocytic tumor of brain
GeneRIF:12385586
Astrocytoma, no ICD-O subtype
Grade II Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytomas, Grade II
Astrocytomas, Pilocytic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
James Malone
Astrocytic Neoplasm[accessedResource: NCIt:C6958][accessDate: 10-05-2010]
Diffuse astrocytoma
GeneRIF:12747804
Grade III Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12168116
GeneRIF:12133571
Astrocytomas, Fibrillary[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:11836615
NCIt:C6958
Subependymal Giant Cell Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Anaplastic Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12077339
Astrocytic Gliomas
Grade III Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12185598
GeneRIF:11958417
Astrocytoma, low grade
Diffuse astrocytoma, low grade
GeneRIF:12519873
Astrocytoma, Fibrillary[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Cystic astrocytoma
Astrocytoma, Gemistocytic
Astrocytic tumor
Protoplasmic Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Anaplastic Astrocytoma
Astrocytoma, Pilocytic
obsolete_astrocytic tumor
Astrocytomas
GeneRIF:12435805
Astrocytoma, Grade III
GeneRIF:11783119
GeneRIF:15799819
GeneRIF:16103883
GeneRIF:12111824
GeneRIF:15289301
Childhood Cerebral Astrocytoma
1.5
Astrocytomas, Grade I[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma
Grade I Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:15902504
GeneRIF:15178645
Astrocytic Gliomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytic Tumor[accessedResource: NCIt:C6958][accessDate: 10-05-2010]
Diffuse astrocytoma, low grade[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
GeneRIF:12393263
surfactants
surface active agent
http://www.ebi.ac.uk/efo/EFO_0001620
A substance which lowers the surface tension of the medium in which it is dissolved, and/or the interfacial tension with other phases, and, accordingly, is positively adsorbed at the liquid/vapour and/or at other interfaces.
surfactant
James Malone
MO_716
http://www.ebi.ac.uk/efo/EFO_0002024
A spectrophotometer is an instrument that measures the intensity of light as a function of the color, or more specifically, the wavelength of light, transmitted by a substance.
spectrophotometer
James Malone
idiopathic pulmonary fibrosis
Chronic and progressive fibrosis of the lung parenchyma of unknown cause.[accessedResource: NCIt:C35716][accessDate: 10-05-2010]
Chronic and progressive fibrosis of the lung parenchyma of unknown cause.
cryptogenic fibrosing alveolitis
NCIt:C35716
IPF
IPF[accessedResource: NCIt:C35716][accessDate: 10-05-2010]
James Malone
coronary artery disease
CAD[accessedResource: NCIt:C26732][accessDate: 10-05-2010]
Narrowing of the coronary arteries due to fatty deposits inside the arterial walls.[accessedResource: NCIt:C26732][accessDate: 10-05-2010]
NCIt:C26732
CAD
Narrowing of the coronary arteries due to fatty deposits inside the arterial walls.
Tomasz Adamusiak
Coronary Disease
Coronary Disease[accessedResource: NCIt:C26732][accessDate: 10-05-2010]
AS
DOID:1712
GeneRIF:15311863
Aortic valve stenosis, NOS
Aortic valve stenosis is a aortic valve disease caused by the incomplete opening of the aortic valve. The aortic valve controls the direction of blood flow from the left ventricle to the aorta. When in good working order, the aortic valve does not impede the flow of blood between these two spaces. Under some circumstances, the aortic valve becomes narrower than normal, impeding the flow of blood. This is known as aortic valve stenosis, or aortic stenosis, often abbreviated AS.[accessedResource: DOID:1712][accessDate: 10-05-2010]
James Malone
aortic stenosis
Valve Stenoses, Aortic[accessedResource: MSH:D001024][accessDate: 10-05-2010]
Stenosed aortic valve
Stenoses, Aortic[accessedResource: MSH:D001024][accessDate: 10-05-2010]
Aortic valve stenosis is a aortic valve disease caused by the incomplete opening of the aortic valve. The aortic valve controls the direction of blood flow from the left ventricle to the aorta. When in good working order, the aortic valve does not impede the flow of blood between these two spaces. Under some circumstances, the aortic valve becomes narrower than normal, impeding the flow of blood. This is known as aortic valve stenosis, or aortic stenosis, often abbreviated as AS.
SNOMEDCT:60573004
Aortic valve stenosis (disorder)[accessedResource: SNOMEDCT:60573004][accessDate: 10-05-2010]
AS[accessedResource: DOID:1712][accessDate: 10-05-2010]
A pathological constriction that can occur above (supravalvular stenosis), below (subvalvular stenosis), or at the AORTIC VALVE. It is characterized by restricted outflow from the LEFT VENTRICLE into the AORTA.
AS - Aortic stenosis[accessedResource: SNOMEDCT:60573004][accessDate: 10-05-2010]
Stenosed aortic valve[accessedResource: SNOMEDCT:60573004][accessDate: 10-05-2010]
Stenosis, Aortic Valve[accessedResource: MSH:D001024][accessDate: 10-05-2010]
Aortic valve stenosis, NOS[accessedResource: SNOMEDCT:60573004][accessDate: 10-05-2010]
Valve Stenoses, Aortic
GeneRIF:11903341
Aortic valve stenosis (disorder)
Aortic valve stenosis is a aortic valve disease caused by the incomplete opening of the aortic valve. The aortic valve controls the direction of blood flow from the left ventricle to the aorta. When in good working order, the aortic valve does not impede the flow of blood between these two spaces. Under some circumstances, the aortic valve becomes narrower than normal, impeding the flow of blood. This is known as aortic valve stenosis, or aortic stenosis, often abbreviated AS.
GeneRIF:14734048
A pathological constriction that can occur above (supravalvular stenosis), below (subvalvular stenosis), or at the AORTIC VALVE. It is characterized by restricted outflow from the LEFT VENTRICLE into the AORTA.[accessedResource: MSH:D001024][accessDate: 10-05-2010]
AS - Aortic stenosis
Stenoses, Aortic
MSH:D001024
Valve Stenosis, Aortic
HRE
Human Renal Epithelial cell line
cranium
chondocranium
chondrocranium[accessedResource: TAO:0001424][accessDate: 10-05-2010]
MAT:0000149
Anatomical cluster that is part of the cranium and composed of cartilage and cartilage replacement bones.[accessedResource: TAO:0001424][accessDate: 10-05-2010]
James Malone
ZFA:0000737
skull bone
Skeletal system that is part of the head, including the splanchnocranium, chondrocranium, and dermatocranium.[accessedResource: ZFA:0000737][accessDate: 10-05-2010]
obsolete_craniofacial skeleton bone
Anatomical cluster that is part of the cranium and composed of cartilage and cartilage replacement bones.
TAO:0001424
true
neurocranium[accessedResource: TAO:0001424][accessDate: 10-05-2010]
Synonym with cranium, use cranium instead.
AAO:0000109
craniofacial skeleton bone[accessedResource: MAT:0000149][accessDate: 10-05-2010]
FMAID:87596
Subdivision of skeletal system which consists of the skeleton of the head and its joints.
skeletal system of head
chondrocranium
FMAID:46565
EMAPA:17680
Skeletal system that is part of the head, including the splanchnocranium, chondrocranium, and dermatocranium.
1.8
skull bone[accessedResource: MAT:0000149][accessDate: 10-05-2010]
Subdivision of skeletal system which consists of the skeleton of the head and its joints.[accessedResource: FMAID:46565][accessDate: 10-05-2010]
chondocranium[accessedResource: TAO:0001424][accessDate: 10-05-2010]
cranial skeleton[accessedResource: MAT:0000149][accessDate: 10-05-2010]
cranium[accessedResource: ZFA:0000737][accessDate: 10-05-2010]
neurocranium
cranial skeleton
EHDAA:6029
MA:0000316
skeletal system of head[accessedResource: MAT:0000149][accessDate: 10-05-2010]
craniofacial skeleton bone
[H]C(Cl)(Br)C(F)(F)F
1-bromo-1-chloro-2,2,2-trifluoroethane
InChI=1/C2HBrClF3/c3-1(4)2(5,6)7/h1H
http://www.ebi.ac.uk/efo/EFO_0001550
A haloalkane that has formula C2HBrClF3.
CHEBI:5615
Fluothane
halothane
Rhodialothan
InChIKey=BCQZXOMGPXTTIC-UHFFFAOYAO
bromochlorotrifluoroethane
2,2,2-trifluoro-1-chloro-1-bromoethane
1,1,1-trifluoro-2-chloro-2-bromoethane
2-bromo-2-chloro-1,1,1-trifluoroethane
Narcotane
1,1,1-trifluoro-2-bromo-2-chloroethane
Phthorothanum
C2HBrClF3
James Malone
James Malone
HPV
NCIt:C27851
Human Papilloma Virus Infection
human papilloma virus
cololrectal tumor
James Malone
true
mg/kg
milligram per kilogram
James Malone
"eastern European house mouse"
"Mus musculus hortulanus"
http://www.ebi.ac.uk/efo/EFO_0002648
Mus musculus musculus
James Malone
SUDHL10
James Malone
Ele Holloway
protocol parameter
H209
James Malone
monocyte-derived osteoclast
BC-3
James Malone
Ele Holloway
Disorder of liver (disorder)[accessedResource: SNOMEDCT:235856003][accessDate: 10-05-2010]
Disorder of liver[accessedResource: SNOMEDCT:235856003][accessDate: 10-05-2010]
GeneRIF:12148114
GeneRIF:12557137
[X]Diseases of the liver
disease of the liver (disorder)
GeneRIF:16339124
GeneRIF:15842357
Any disease or dysfunction of the liver and the intrahepatic bile ducts.[accessedResource: NCIt:C3196][accessDate: 10-05-2010]
Liver Dysfunction
GeneRIF:15661915
GeneRIF:11929053
GeneRIF:15286165
[X]Diseases of the liver (disorder)[accessedResource: SNOMEDCT:197551000][accessDate: 10-05-2010]
Liver disorder in pregnancy
liver disorder in pregnancy - delivered[accessedResource: DOID:409][accessDate: 10-05-2010]
GeneRIF:12006706
Diseases, Liver
GeneRIF:12085365
[X]Diseases of the liver (disorder)
Liver disorder in pregnancy (disorder)
GeneRIF:15112358
Disorder of liver (disorder)
Pathological processes of the LIVER.[accessedResource: MSH:D008107][accessDate: 10-05-2010]
Unspecified disorder of liver[accessedResource: ICD9:573.9][accessDate: 10-05-2010]
Liver disorder in pregnancy unspecified (disorder)[accessedResource: DOID:409][accessDate: 10-05-2010]
GeneRIF:12000722
GeneRIF:15719405
Hepatopathy[accessedResource: SNOMEDCT:235856003][accessDate: 10-05-2010]
disease of liver [Ambiguous][accessedResource: DOID:409][accessDate: 10-05-2010]
GeneRIF:12794718
Unspecified disorder of liver
NCIt:C3196
liver disorder antepartum[accessedResource: DOID:409][accessDate: 10-05-2010]
GeneRIF:12143056
hepatic disorder[accessedResource: DOID:409][accessDate: 10-05-2010]
ICD9:573.9
SNOMEDCT:197375001
liver disorder in pregnancy - delivered
GeneRIF:12823590
GeneRIF:12149233
Any disease or dysfunction of the liver and the intrahepatic bile ducts.
SNOMEDCT:235856003
DOID:409
GeneRIF:12823592
Liver disorder in pregnancy NOS (disorder)
LIVER DISORDER NOS
LIVER DIS
GeneRIF:12724528
liver disorder[accessedResource: DOID:409][accessDate: 10-05-2010]
SNOMEDCT:197551000
Liver disorder in pregnancy (disorder)[accessedResource: DOID:409][accessDate: 10-05-2010]
GeneRIF:15969449
GeneRIF:12532447
GeneRIF:11898128
[X]Diseases of the liver[accessedResource: SNOMEDCT:197551000][accessDate: 10-05-2010]
liver disorder antepartum
Liver disorder in pregnancy, with delivery
Disorder of liver
Dysfunctions, Liver
liver disease
disease of liver [Ambiguous]
Liver disorder NOS[accessedResource: SNOMEDCT:197375001][accessDate: 10-05-2010]
Pathological processes of the LIVER.
Liver disorder in pregnancy[accessedResource: DOID:409][accessDate: 10-05-2010]
GeneRIF:12029628
James Malone
Dysfunctions, Liver[accessedResource: MSH:D008107][accessDate: 10-05-2010]
Liver disorder in pregnancy unspecified (disorder)
GeneRIF:15246202
MSH:D008107
GeneRIF:14624764
LIVER DIS[accessedResource: MSH:D008107][accessDate: 10-05-2010]
Liver disorder in pregnancy, unspecified as to episode of care[accessedResource: DOID:409][accessDate: 10-05-2010]
GeneRIF:12705907
Disease of liver
Hepatopathy
GeneRIF:11929052
GeneRIF:15235035
Liver disorder NOS (disorder)[accessedResource: DOID:409][accessDate: 10-05-2010]
LD - Liver disease[accessedResource: SNOMEDCT:235856003][accessDate: 10-05-2010]
LD - Liver disease
GeneRIF:12830005
GeneRIF:15377291
disease of the liver (disorder)[accessedResource: DOID:409][accessDate: 10-05-2010]
Liver disorder NOS (disorder)
Liver disorder in pregnancy - delivered (disorder)
Liver disorder in pregnancy, unspecified as to episode of care
Hepatic Disorder
Disease of liver[accessedResource: SNOMEDCT:235856003][accessDate: 10-05-2010]
Liver disorder in pregnancy - delivered (disorder)[accessedResource: DOID:409][accessDate: 10-05-2010]
GeneRIF:12445411
Liver disorder in pregnancy, with delivery[accessedResource: DOID:409][accessDate: 10-05-2010]
Dysfunction, Liver[accessedResource: MSH:D008107][accessDate: 10-05-2010]
liver disorder
GeneRIF:15774823
GeneRIF:15944310
Liver Diseases[accessedResource: MSH:D008107][accessDate: 10-05-2010]
GeneRIF:15653097
GeneRIF:11810299
GeneRIF:12297838
Liver disorder in pregnancy NOS (disorder)[accessedResource: DOID:409][accessDate: 10-05-2010]
SW756
James Malone
Ele Holloway
An assay where chromatin immunoprecipitation (ChIP) is used in combination with microarray technology
ChIP-chip by array
Fu97
James Malone
Ele Holloway
long-tailed macaque
crab-eating macaque
http://www.ebi.ac.uk/efo/EFO_0002642
The Crab-eating Macaque (Macaca fascicularis) is a primarily arboreal macaque native to Southeast Asia.
Macaca fascicularis
James Malone
true
An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity.
http://www.ebi.ac.uk/efo/EFO_0001433
A process is an entity that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity during the time it occurs.
process
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158848&type=germplasm
CS57824 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158848&type=germplasm
CS57824
James Malone
SNU387
James Malone
Ele Holloway
Capan-2
Capan2
James Malone
Ele Holloway
GM12005
James Malone
Caudate Nucleus
NCIt:C12451
obsolete_caudate nucleus
Nucleus Caudatus
An elongated gray mass of the neostriatum located adjacent to the lateral ventricle of the brain. (MeSH)
Nucleus Caudatus[accessedResource: NCIt:C12451][accessDate: 10-05-2010]
Caudate Nucleus[accessedResource: NCIt:C12451][accessDate: 10-05-2010]
An elongated gray mass of the neostriatum located adjacent to the lateral ventricle of the brain. (MeSH)[accessedResource: NCIt:C12451][accessDate: 10-05-2010]
Duplicated term, use EFO_0000907
true
http://www.ebi.ac.uk/efo/EFO_0001838
CHEBI:50855
antiatherogenic agent
James Malone
MO_912
loop design
Tomasz Adamusiak
[H]C(=C([H])c1cc(O)cc(O)c1)c1ccc(O)cc1
http://www.ebi.ac.uk/efo/EFO_0002419
resveratrol
3,4',5-Trihydroxystilbene
C14H12O3
A stilbenol that has formula C14H12O3.
CHEBI:27881
Ele Holloway
James Malone
InChI=1/C14H12O3/c15-12-5-3-10(4-6-12)1-2-11-7-13(16)9-14(17)8-11/h1-9,15-17H
5-[2-(4-hydroxyphenyl)ethenyl]benzene-1,3-diol
InChIKey=LUKBXSAWLPMMSZ-UHFFFAOYAJ
mature sperm cell
male gamete
A mature, haploid male gamete.
spermatozoon[accessedResource: FBbt:00004954][accessDate: 10-05-2010]
semen
A mature male germ cell that develops from a spermatid.
sperm cell
spermatozoid[accessedResource: ZFA:0009006][accessDate: 10-05-2010]
sperm
Definitive germ cell of the male sex.
spermatozoon
spermatozoid
FMAID:67338
FBbt:00004954
mature sperm cell[accessedResource: MAT:0000131][accessDate: 10-05-2010]
Definitive germ cell of the male sex.[accessedResource: FMAID:67338][accessDate: 10-05-2010]
SAEL:93
A mature, haploid male gamete.[accessedResource: FBbt:00004954][accessDate: 10-05-2010]
ZFA:0009006
male gamete[accessedResource: MAT:0000131][accessDate: 10-05-2010]
A mature male germ cell that develops from a spermatid.[accessedResource: ZFA:0009006][accessDate: 10-05-2010]
WBbt:0005321
MAT:0000131
James Malone
spermatazoon[accessedResource: MAT:0000131][accessDate: 10-05-2010]
spermatazoon
semen[accessedResource: MAT:0000131][accessDate: 10-05-2010]
sperm cell[accessedResource: ZFA:0009006][accessDate: 10-05-2010]
MA:0002765
prepuce[accessedResource: BTO:0001113][accessDate: 10-05-2010]
BTO:0001113
prepuce
A fold of skin that covers the glans of the penis.
foreskin
James Malone
A fold of skin that covers the glans of the penis.[accessedResource: BTO:0001113][accessDate: 10-05-2010]
suppressor T-lymphocyte[accessedResource: CL:0000815][accessDate: 10-05-2010]
regulatory T-lymphocyte[accessedResource: CL:0000815][accessDate: 10-05-2010]
CL:0000815
suppressor T-lymphocyte
regulatory T-lymphocyte
James Malone
suppressor T cell[accessedResource: CL:0000815][accessDate: 10-05-2010]
pancreatic T regulatory cell
A T cell which regulates overall immune responses as well as the responses of other T cell subsets through direct cell-cell contact and cytokine release.[accessedResource: CL:0000815][accessDate: 10-05-2010]
regulatory T-cell
suppressor T-cell
A T cell which regulates overall immune responses as well as the responses of other T cell subsets through direct cell-cell contact and cytokine release.
CROAP-5
James Malone
CroAP5
CROAP5
Ele Holloway
MO_893
curator
Tomasz Adamusiak
James Malone
A GM19240 is a cell line.
A GM19240 is all of the following: something that has as quality a female, something that derives from a Homo sapiens, and something that derives from a b cell.
GM19240
Natural Language Generator 8th April 2010
The lower region of the anterior abdominal wall located laterally to the pubic region.[accessedResource: NCIt:C12726][accessDate: 10-05-2010]
Inguinal
inguinal region
The lower region of the anterior abdominal wall located laterally to the pubic region.
NCIt:C12726
James Malone
iliac region
Inguinal[accessedResource: NCIt:C12726][accessDate: 10-05-2010]
Groin
Groin[accessedResource: NCIt:C12726][accessDate: 10-05-2010]
paraventricular nucleus
James Malone
Ele Holloway
C2C12
James Malone
http://en.wikipedia.org/wiki/Protein_microarray
Helen Parkinson
protein binding array
A protein array is an array which provides a multiplex approach to identify protein–protein interactions, to identify the substrates of protein kinases, to identify transcription factor protein-activation, or to identify the targets of biologically active small molecules. The array is a substrate (e.g. glass) on which different molecules of protein or specific DNA binding sequences (as capture probes for the proteins) have been affixed at separate locations in an ordered manner thus forming a microscopic array. The most common protein microarray is the antibody microarray, where antibodies are spotted onto the protein chip and are used as capture molecules to detect proteins from cell lysate solutions.
protein array
MAT:0000098
FMAID:50801
MA:0000168
CNS
synganglion
NCIt:C12439
TAO:0000008
Nervous System, Brain[accessedResource: NCIt:C12439][accessDate: 10-05-2010]
Segment of neuraxis that has as its parts gray matter and white matter that surround the cerebral ventricular system; Examples: There is only one brain.[accessedResource: FMAID:50801][accessDate: 10-05-2010]
NIFSTD:birnlex_796
An organ composed of grey and white matter containing billions of neurons that is the center for intelligence and reasoning. It is protected by the bony cranium.
The part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube.
* Subdivision of neuraxis that consists of neural tissue (which is organized into gray matter and white matter) and the cerebral ventricular system (cavity of organ part); it is embryologically derived from the rostral part of the neural tube; together with the spinal cord, the brain constitutes the organ neuraxis. Examples: There is only one brain. (UWDA) * That part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube. Functions include muscle control and coordination, sensory reception and integration, speech production, memory storage, and the elaboration of thought and emotions. (NCI) * The part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube. (MSH) * portion of the vertebrate central nervous system that is enclosed within the cranium, continuous with the spinal cord, and composed of gray matter and white matter; the primary center for the regulation and control of bodily activities, receiving and interpreting sensory impulses, and transmitting information to the muscles and body organs; also the seat of consciousness, thought, memory, and emotion; includes the functionally similar portion of the invertebrate nervous system. (CSP)[accessedResource: NIFSTD:birnlex_796][accessDate: 10-05-2010]
Tomasz Adamusiak
The central nervous system is that part of the nervous system that consists of the brain and spinal cord. The central nervous system (CNS) is one of the two major divisions of the nervous system. The other is the peripheral nervous system (PNS) which is outside the brain and spinal cord.[accessedResource: BTO:0000227][accessDate: 10-05-2010]
EV:0100164
James Malone
synganglion[accessedResource: MAT:0000098][accessDate: 10-05-2010]
TADS:0000188
SAEL:12
Nervous System, Brain
Cavitated compound organ which is comprised of gray and white matter and surrounds the cerebral ventricular system.[accessedResource: TAO:0000008][accessDate: 10-05-2010]
WBbt:0005440
An organ composed of grey and white matter containing billions of neurons that is the center for intelligence and reasoning. It is protected by the bony cranium.[accessedResource: NCIt:C12439][accessDate: 10-05-2010]
FBbt:00003624
The part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube.
* Subdivision of neuraxis that consists of neural tissue (which is organized into gray matter and white matter) and the cerebral ventricular system (cavity of organ part); it is embryologically derived from the rostral part of the neural tube; together with the spinal cord, the brain constitutes the organ neuraxis. Examples: There is only one brain. (UWDA) * That part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube. Functions include muscle control and coordination, sensory reception and integration, speech production, memory storage, and the elaboration of thought and emotions. (NCI) * The part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube. (MSH) * portion of the vertebrate central nervous system that is enclosed within the cranium, continuous with the spinal cord, and composed of gray matter and white matter; the primary center for the regulation and control of bodily activities, receiving and interpreting sensory impulses, and transmitting information to the muscles and body organs; also the seat of consciousness, thought, memory, and emotion; includes the functionally similar portion of the invertebrate nervous system. (CSP)
brain structure
brain
brain structure[accessedResource: ZFA:0000008][accessDate: 10-05-2010]
central nervous system[accessedResource: BTO:0000227][accessDate: 10-05-2010]
central nervous system
EHDAA:2641
MFO:0002240
Segment of neuraxis that has as its parts gray matter and white matter that surround the cerebral ventricular system; Examples: There is only one brain.
The central nervous system is that part of the nervous system that consists of the brain and spinal cord. The central nervous system (CNS) is one of the two major divisions of the nervous system. The other is the peripheral nervous system (PNS) which is outside the brain and spinal cord.
ZFA:0000008
BTO:0000227
Cavitated compound organ which is comprised of gray and white matter and surrounds the cerebral ventricular system.
CNS[accessedResource: BTO:0000227][accessDate: 10-05-2010]
MSH:D013920
Essential thrombocythaemia (clinical disorder)[accessedResource: SNOMEDCT:109994006][accessDate: 10-05-2010]
NCIt:C3407
Essential Thrombocytemia
Thrombocythemia, Hemorrhagic
Essential thrombocytosis (disorder)[accessedResource: DOID:2224][accessDate: 10-05-2010]
Essential thrombocythemia (clinical disorder)[accessedResource: SNOMEDCT:109994006][accessDate: 10-05-2010]
Thrombocythemias, Hemorrhagic[accessedResource: MSH:D013920][accessDate: 10-05-2010]
A chronic myeloproliferative neoplasm that involves primarily the megakaryocytic lineage. It is characterized by sustained thrombocytosis in the blood, increased numbers of large, mature megakaryocytes in the bone marrow, and episodes of thrombosis and/or hemorrhage. The cause is unknown. Median survival times of 10-15 years are commonly reported. (WHO, 2008)[accessedResource: NCIt:C3407][accessDate: 10-05-2010]
Idiopathic hemorrhagic thrombocythemia[accessedResource: SNOMEDCT:128844009][accessDate: 10-05-2010]
GeneRIF:12091373
Thrombocythemias, Idiopathic
Essential haemorrhagic thrombocythaemia
Essential thrombocytosis (disorder)
Essential (hemorrhagic) thrombocythemia
Essential thrombocythemia (clinical)
Thrombocythemia, Idiopathic
Essential thrombocythemia (clinical disorder)
A chronic myeloproliferative disorder that involves primarily the megakaryocytic lineage. It is characterized by sustained thrombocytosis in the blood, increased numbers of large, mature megakaryocytes in the bone marrow, and episodes of thrombosis and/or hemorrhage. The cause is unknown. Median survival times of 10-15 years are commonly reported. (WHO, 2001)
Idiopathic haemorrhagic thrombocythaemia
A chronic myeloproliferative neoplasm that involves primarily the megakaryocytic lineage. It is characterized by sustained thrombocytosis in the blood, increased numbers of large, mature megakaryocytes in the bone marrow, and episodes of thrombosis and/or hemorrhage. The cause is unknown. Median survival times of 10-15 years are commonly reported. (WHO, 2008)
Essential haemorrhagic thrombocythaemia[accessedResource: SNOMEDCT:128844009][accessDate: 10-05-2010]
DOID:2224
Idiopathic thrombocythemia (disorder)[accessedResource: DOID:2224][accessDate: 10-05-2010]
Essential thrombocythemia (morphologic abnormality)[accessedResource: DOID:2224][accessDate: 10-05-2010]
Essential thrombocythaemia[accessedResource: SNOMEDCT:109994006][accessDate: 10-05-2010]
Idiopathic thrombocythaemia
[M]Idiopathic thrombocythemia
idiopathic thrombocythemia[accessedResource: DOID:2224][accessDate: 10-05-2010]
A clinical syndrome characterized by repeated spontaneous hemorrhages and a remarkable increase in the number of circulating platelets.[accessedResource: MSH:D013920][accessDate: 10-05-2010]
primary Thrombocytosis[accessedResource: DOID:2224][accessDate: 10-05-2010]
Thrombocythemias, Idiopathic[accessedResource: MSH:D013920][accessDate: 10-05-2010]
GeneRIF:14764528
Essential thrombocythaemia (disorder)[accessedResource: DOID:2224][accessDate: 10-05-2010]
Thrombocythemias, Essential[accessedResource: MSH:D013920][accessDate: 10-05-2010]
GeneRIF:12221665
Essential thrombocythaemia (clinical)[accessedResource: SNOMEDCT:109994006][accessDate: 10-05-2010]
[M]Idiopathic thrombocythaemia
Essential hemorrhagic thrombocythemia[accessedResource: SNOMEDCT:128844009][accessDate: 10-05-2010]
Essential thrombocythaemia (disorder)
Idiopathic thrombocythaemia[accessedResource: SNOMEDCT:128844009][accessDate: 10-05-2010]
Essential Thrombocytemia[accessedResource: NCIt:C3407][accessDate: 10-05-2010]
GeneRIF:12377969
GeneRIF:11860444
A clinical syndrome characterized by repeated spontaneous hemorrhages and a remarkable increase in the number of circulating platelets.
Essential Thrombocytosis
Hemorrhagic Thrombocythemia[accessedResource: MSH:D013920][accessDate: 10-05-2010]
GeneRIF:12010817
Essential thrombocythemia (morphologic abnormality)
Essential Thrombocythemias
[M]Idiopathic thrombocythemia[accessedResource: SNOMEDCT:109994006][accessDate: 10-05-2010]
Essential thrombocytosis[accessedResource: SNOMEDCT:109994006][accessDate: 10-05-2010]
Thrombocythemia, Primary
GeneRIF:14966468
GeneRIF:15837627
[M]Idiopathic thrombocythaemia[accessedResource: SNOMEDCT:109994006][accessDate: 10-05-2010]
Idiopathic hemorrhagic thrombocythemia
Idiopathic haemorrhagic thrombocythaemia[accessedResource: SNOMEDCT:128844009][accessDate: 10-05-2010]
Essential thrombocythaemia (clinical)
SNOMEDCT:128844009
Essential thrombocythaemia (clinical disorder)
Primary Thrombocythemia[accessedResource: NCIt:C3407][accessDate: 10-05-2010]
Thrombocythemias, Primary[accessedResource: MSH:D013920][accessDate: 10-05-2010]
Hemorrhagic Thrombocythemias
Primary Thrombocythemias
GeneRIF:12756017
essential thrombocythemia
Idiopathic thrombocythemia (disorder)
Essential thrombocythemia (disorder)[accessedResource: SNOMEDCT:109994006][accessDate: 10-05-2010]
James Malone
GeneRIF:11891801
primary Thrombocytosis
Essential thrombocythemia (disorder)
SNOMEDCT:109994006
Essential thrombocythaemia
Essential thrombocythemia (clinical)[accessedResource: SNOMEDCT:109994006][accessDate: 10-05-2010]
FMAID:19234
James Malone
TADS:0000486
MA:0000413
MAT:0000129
SAEL:120
vas deferens
vasa deferentia[accessedResource: MAT:0000129][accessDate: 10-05-2010]
Deferent duct[accessedResource: FMAID:19234][accessDate: 10-05-2010]
WBbt:0005337
EV:0100105
Deferent duct
FBbt:00004968
ductus deferens
vasa deferentia
EMAPA:18681
Vas deferens[accessedResource: FMAID:19234][accessDate: 10-05-2010]
topoisomerase I inhibitors
http://www.ebi.ac.uk/efo/EFO_0001886
CHEBI:50276
An inhibitor of bacterial enzymes of the DNA topoisomerases, Type I class that catalyze ATP-independent breakage of one of the two strands of DNA, passage of the unbroken strand through the break, and rejoining of the broken strand. These bacterial enzymes reduce the topological stress in the DNA structure by relaxing negatively, but not positively, supercoiled DNA.
topoisomerase I inhibitor
James Malone
http://www.ebi.ac.uk/efo/EFO_0001820
CHEBI:23366
compatible osmolytes
James Malone
true
A dimensionless concentration unit which denotes the mass of a substance in a mixture as a percentage of the mass of the entire mixture.
mass percent
Damage inflicted on the body as the direct or indirect result of an external force, with or without disruption of structural continuity
injury
James Malone
NCIH82
James Malone
Ele Holloway
MAT:0000207
FBbt:00005137
Any of a number of aggregations of neurons, glial cells and their processes, surrounded by a glial cell and connective tissue sheath (plural: ganglia).
Any of a number of aggregations of neurons, glial cells and their processes, and surrounded by a glial cell and connective tissue sheath (plural: ganglia).
Any of a number of aggregations of neurons, glial cells and their processes, and surrounded by a glial cell and connective tissue sheath (plural: ganglia).[accessedResource: FBbt:00005137][accessDate: 10-05-2010]
invertebrate ganglion
James Malone
embryonic day 13.5
Tomasz Adamusiak
Jie Zheng
tyrosine kinase inhibitors
protein tyrosine kinase inhibitor
http://www.ebi.ac.uk/efo/EFO_0001870
CHEBI:38637
tyrosine kinase inhibitor
James Malone
General anatomical term which refers to a chamber of an organ with cavitated organ parts. Examples: right ventricle of heart, lateral ventricle of brain.[accessedResource: FMAID:82553][accessDate: 10-05-2010]
Cavitated compound organ that receives blood flow from the atrium and delivers blood to the body via the aorta. Valves are present to direct flow. There are only two chambers present in the fish heart.
MAT:0000497
The lower right and left chambers of the heart. The right pumps venous blood into the lungs and the left pumps oxygenated blood into the systemic arterial circulation. (MeSH)[accessedResource: NCIt:C12730][accessDate: 10-05-2010]
A chamber of the heart which receives blood from a corresponding atrium and from which blood is forced into the arteries.[accessedResource: BTO:0000862][accessDate: 10-05-2010]
ZFA:0000009
MA:0000091
FMAID:82553
Ventricles, Heart
NCIt:C12730
ventricle
Cavitated compound organ that receives blood flow from the atrium and delivers blood to the body via the aorta. Valves are present to direct flow. There are only two chambers present in the fish heart.[accessedResource: ZFA:0000009][accessDate: 10-05-2010]
cardiac ventricle
Cardiac Ventricle[accessedResource: NCIt:C12730][accessDate: 10-05-2010]
Cardiac Ventricles[accessedResource: NCIt:C12730][accessDate: 10-05-2010]
Cardiac Ventricles
MFO:0080920
The lower right and left chambers of the heart. The right pumps venous blood into the lungs and the left pumps oxygenated blood into the systemic arterial circulation. (MeSH)
A chamber of the heart which receives blood from a corresponding atrium and from which blood is forced into the arteries.
Ventricles, Heart[accessedResource: NCIt:C12730][accessDate: 10-05-2010]
Heart Ventricle
One of four heart chambers.
General anatomical term which refers to a chamber of an organ with cavitated organ parts. Examples: right ventricle of heart, lateral ventricle of brain.
EMAPA:17331
Tomasz Adamusiak
BTO:0000862
One of four heart chambers.[accessedResource: TAO:0000009][accessDate: 10-05-2010]
EV:0100020
heart ventricle[accessedResource: BTO:0000862][accessDate: 10-05-2010]
EHDAA:1900
TAO:0000009
true
For example, the role of a person as a surgeon, the role of an artificial heart in pumping blood, the role of a chemical compound in an experiment, the role of a drug in the treatment of a disease.
A realizable entity [snap:RealizableEntity] the manifestation of which brings about some result or end that is not essential to a continuant [snap:Continuant] in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant [snap:Continuant] in some kinds of natural, social or institutional contexts.
http://www.ebi.ac.uk/efo/EFO_0001440
A role is an entity which is borne in a material entity in some kinds of natural, social or institutional contexts, but which is not essential to the fundamental definition of that material entity (i.e. the material entity exists with or without the role). For example, the role of a person as a surgeon, the role of an artificial heart in pumping blood, the role of a chemical compound in an experiment, the role of a drug in the treatment of a disease.
role
James Malone
NCIt:C12366
FMAID:30317
Bones[accessedResource: NCIt:C12366][accessDate: 10-05-2010]
osseous tissue[accessedResource: BTO:0000140][accessDate: 10-05-2010]
Connective tissue that forms the skeletal components of the body.[accessedResource: NCIt:C12366][accessDate: 10-05-2010]
Connective tissue that forms the skeletal components of the body.
The hard form of connective tissue that constitutes the majority of the skeleton of most vertebrates; it consists of an organic component (the cells and matrix) and an inorganic, or mineral, component; the matrix contains a framework of collagenous fibers and is impregnated with the mineral component, chiefly calcium phosphate (85 per cent) and calcium carbonate (10 per cent), which imparts the quality of rigidity to bone.[accessedResource: BTO:0000140][accessDate: 10-05-2010]
Portion of tissue which is calcified connective tissue making up the structural elements of the skeletal system.
BTO:0000140
James Malone
bone
Osseous
The hard form of connective tissue that constitutes the majority of the skeleton of most vertebrates; it consists of an organic component (the cells and matrix) and an inorganic, or mineral, component; the matrix contains a framework of collagenous fibers and is impregnated with the mineral component, chiefly calcium phosphate (85 per cent) and calcium carbonate (10 per cent), which imparts the quality of rigidity to bone.
MAT:0000299
Bones
XAO:0000169
SAEL:10
Osseous[accessedResource: NCIt:C12366][accessDate: 10-05-2010]
osseous tissue
TAO:0001514
EV:0100140
Portion of tissue which is calcified connective tissue making up the structural elements of the skeletal system.[accessedResource: TAO:0001514][accessDate: 10-05-2010]
FBbt:00005413
A0
anlagen in statu nascendi
A0[accessedResource: FBbt:00005413][accessDate: 10-05-2010]
"anlagen in statu nascendi" are domains that do not yet coincide 1:1 with a later organ. Anlagen in statu nascendi are typically defined for the early blastoderm by the expression domains of genes which, in the late blastoderm or later, are expressed in specific anlagen, but initially come on in larger domains.[accessedResource: FBbt:00005413][accessDate: 10-05-2010]
anlage in statu nascendi
James Malone
CL:0000549
early normoblast[accessedResource: CL:0000549][accessDate: 10-05-2010]
A nucleated immature erythrocyte, having cytoplasm generally similar to that of the earlier proerythroblast but sometimes even more basophilic, and usually regular in outline. The nucleus is still relatively large, but the chromatin strands are thicker and more deeply staining, giving a coarser appearance; the nucleoli have disappeared.[accessedResource: CL:0000549][accessDate: 10-05-2010]
basophilic normoblast
early erythroblast[accessedResource: CL:0000549][accessDate: 10-05-2010]
prorubricyte
prorubricyte[accessedResource: CL:0000549][accessDate: 10-05-2010]
basophilic erythroblast
early erythroblast
early normoblast
Jie Zheng
basophilic normoblast[accessedResource: CL:0000549][accessDate: 10-05-2010]
A nucleated immature erythrocyte, having cytoplasm generally similar to that of the earlier proerythroblast but sometimes even more basophilic, and usually regular in outline. The nucleus is still relatively large, but the chromatin strands are thicker and more deeply staining, giving a coarser appearance; the nucleoli have disappeared.
Tomasz Adamusiak
MAT:0000402
child
child[accessedResource: MAT:0000402][accessDate: 10-05-2010]
XAO:1000010
juvenile stage
James Malone
EV:0300051
young adult[accessedResource: MAT:0000402][accessDate: 10-05-2010]
young adult
GeneRIF:15894926
colon adenocarcinoma
Colonic Adenocarcinoma
GeneRIF:14666619
adenocarcinoma of colon
Colonic adenocarcinoma[accessedResource: DOID:234][accessDate: 10-05-2010]
GeneRIF:15546874
GeneRIF:15161648
adenocarcinoma of colon[accessedResource: DOID:234][accessDate: 10-05-2010]
GeneRIF:12918105
NCIt:C4349
An adenocarcinoma arising from the colon. It is more frequently seen in populations with a Western type diet and in patients with a history of chronic inflammatory bowel disease. Signs and symptoms include intestinal bleeding, anemia, and change in bowel habits. According to the degree of cellular differentiation, colonic adenocarcinomas are divided into well differentiated, moderately, and poorly differentiated. Morphologic variants include the mucinous adenocarcinoma and signet-ring adenocarcinoma. Lymphatic or hematogenous spread can occur early in the process and lead to systemic disease.
James Malone
GeneRIF:12019353
GeneRIF:15069532
GeneRIF:15517914
GeneRIF:15526283
GeneRIF:12878221
An adenocarcinoma arising from the colon. It is more frequently seen in populations with a Western type diet and in patients with a history of chronic inflammatory bowel disease. Signs and symptoms include intestinal bleeding, anemia, and change in bowel habits. According to the degree of cellular differentiation, colonic adenocarcinomas are divided into well differentiated, moderately, and poorly differentiated. Morphologic variants include the mucinous adenocarcinoma and signet-ring adenocarcinoma. Lymphatic or hematogenous spread can occur early in the process and lead to systemic disease.[accessedResource: NCIt:C4349][accessDate: 10-05-2010]
adenocarcinoma of the colon
DOID:234
GeneRIF:15865210
adenocarcinoma of the colon[accessedResource: DOID:234][accessDate: 10-05-2010]
GeneRIF:12383707
GeneRIF:11731423
teratozoospermia
Ele Holloway
teratospermia
presence of structurally anomalous spermatozoa in the semen; malformations include the physical bending of the sperm to produce kinks or bends
presence of structurally anomalous spermatozoa in the semen; malformations include the physical bending of the sperm to produce kinks or bends[accessedResource: MP:0005578][accessDate: 10-05-2010]
teratospermia[accessedResource: MP:0005578][accessDate: 10-05-2010]
MP:0005578
Tomasz Adamusiak
NIFSTD:sao676858164
A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast).
A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast).[accessedResource: CL:0000192][accessDate: 10-05-2010]
Non-striated, elongated, spindle-shaped cells found lining the digestive tract, uterus, and blood vessels. They are derived from specialized myoblasts (myoblasts, smooth muscle) (MSH).
non-striated muscle cell[accessedResource: NIFSTD:sao676858164][accessDate: 10-05-2010]
CL:0000192
Tomasz Adamusiak
smooth muscle cell
Non-striated, elongated, spindle-shaped cells found lining the digestive tract, uterus, and blood vessels. They are derived from specialized myoblasts (myoblasts, smooth muscle) (MSH).[accessedResource: NIFSTD:sao676858164][accessDate: 10-05-2010]
non-striated muscle cell
James Malone
NCIt:C43423
conditioned mesenchymal stem cell
mesenchymal stem cell
James Malone
[1,4-(N-Acetyl-beta-D-glucosaminyl)]n
CHEBI:17029
InChIKey=WZZVUHWLNMNWLW-IRGKDUGGDK
An aminoglycan that has formula (C8H13NO5)n.
http://www.ebi.ac.uk/efo/EFO_0001502
InChI=1/C24H41N3O16/c1-7(31)25-13-18(36)20(11(5-29)39-22(13)38)42-24-15(27-9(3)33)19(37)21(12(6-30)41-24)43-23-14(26-8(2)32)17(35)16(34)10(4-28)40-23/h10-24,28-30,34-38H,4-6H2,1-3H3,(H,25,31)(H,26,32)(H,27,33)/t10-,11-,12-,13-,14-,15-,16-,17-,18-,19-,20-,21-,22-,23+,24+/m1/s1/f/h25-27H
chitin
(1->4)-2-acetamido-2-deoxy-beta-D-glucan
(C8H13NO5)n
beta-1,4-Poly-N-acetyl-D-glucosamine
[4)-beta-D-GlcpNAc(1->]n
CHEBI:23527
http://www.ebi.ac.uk/efo/EFO_0001517
cytochalasin B
CHEBI:22707
http://www.ebi.ac.uk/efo/EFO_0001665
benzenetriols
James Malone
NCIH2170
James Malone
Ele Holloway
CHEBI:22978
cadmium molecular entity
cadmium molecular entities
http://www.ebi.ac.uk/efo/EFO_0001497
cadmium compounds
Adenosquamous Cell Lung Carcinoma[accessedResource: NCIt:C9133][accessDate: 10-05-2010]
An aggressive carcinoma with a poor prognosis characterized by a presence of both malignant squamous cells and glandular cells.
Adenosquamous Cell Lung Carcinoma
adenosquamous lung carcinoma
NCIt:C9133
James Malone
DOID:4829
An aggressive carcinoma with a poor prognosis characterized by a presence of both malignant squamous cells and glandular cells.[accessedResource: NCIt:C9133][accessDate: 10-05-2010]
GeneRIF:14671199
Multicystic ovaries
PCOD - Polycystic ovarian disease[accessedResource: SNOMEDCT:69878008][accessDate: 10-05-2010]
GeneRIF:15695318
POLYCYSTIC OVARIES
PCOS[accessedResource: DOID:11612][accessDate: 10-05-2010]
GeneRIF:15926113
A complex disorder characterized by infertility, HIRSUTISM; OBESITY; and various menstrual disturbances such as OLIGOMENORRHEA; AMENORRHEA; ANOVULATION. Polycystic ovary syndrome is usually associated with bilateral enlarged ovaries studded with atretic follicles, not with cysts. The term, polycystic ovary, is misleading.
Multicystic ovaries[accessedResource: SNOMEDCT:69878008][accessDate: 10-05-2010]
GeneRIF:15588467
GeneRIF:14764797
GeneRIF:15057670
GeneRIF:12857431
PCOS
GeneRIF:16213847
NCIt:C27086
Polycystic ovaries (disorder)
polycystic ovary syndrome
PCO - Polycystic ovaries[accessedResource: SNOMEDCT:69878008][accessDate: 10-05-2010]
GeneRIF:15516780
GeneRIF:15862282
GeneRIF:15240646
PCOS - Polycystic ovarian syndrome[accessedResource: SNOMEDCT:69878008][accessDate: 10-05-2010]
Cystic disease of ovaries[accessedResource: SNOMEDCT:69878008][accessDate: 10-05-2010]
James Malone
Cystic disease of ovaries
Stein Leventhal Syndrome
MSH:D011085
GeneRIF:14688155
GeneRIF:16084882
Ovaries, Sclerocystic
Polycystic ovarian syndrome[accessedResource: SNOMEDCT:69878008][accessDate: 10-05-2010]
Sclerocystic Ovary Syndrome
GeneRIF:14669168
GeneRIF:12574198
GeneRIF:12849814
GeneRIF:15533361
GeneRIF:12050223
GeneRIF:12364442
GeneRIF:15292352
PCO - Polycystic ovaries
Polycystic ovaries[accessedResource: ICD9:256.4][accessDate: 10-05-2010]
GeneRIF:15598676
GeneRIF:12161545
GeneRIF:12213887
GeneRIF:14671189
GeneRIF:15653207
GeneRIF:12923129
GeneRIF:15731326
GeneRIF:14671186
GeneRIF:12396555
Polycystic ovarian syndrome
GeneRIF:12615821
Sclerocystic Ovarian Degeneration[accessedResource: MSH:D011085][accessDate: 10-05-2010]
Ovaries, Sclerocystic[accessedResource: MSH:D011085][accessDate: 10-05-2010]
NCIt:C26862
GeneRIF:12857430
GeneRIF:12477518
GeneRIF:14602801
GeneRIF:12679434
GeneRIF:15178661
GeneRIF:14684846
GeneRIF:15985479
PCOD - Polycystic ovarian disease
Polycystic Ovarian disease
GeneRIF:14671196
GeneRIF:15950665
GeneRIF:12620441
Stein-Leventhal Syndrome[accessedResource: MSH:D011085][accessDate: 10-05-2010]
GeneRIF:15191349
polycystic ovary
GeneRIF:15233555
Sclerocystic Ovary
GeneRIF:15624269
Sclerocystic Ovary[accessedResource: MSH:D011085][accessDate: 10-05-2010]
GeneRIF:12519859
ICD9:256.4
GeneRIF:14561641
GeneRIF:15950642
GeneRIF:15010862
PCOS - Polycystic ovarian syndrome
GeneRIF:16159937
SNOMEDCT:69878008
GeneRIF:15886251
GeneRIF:14764802
polycystic ovary[accessedResource: DOID:11612][accessDate: 10-05-2010]
GeneRIF:15155816
GeneRIF:15374726
GeneRIF:14644808
Polycystic ovaries (disorder)[accessedResource: DOID:11612][accessDate: 10-05-2010]
Stein-Leventhal synd.[accessedResource: DOID:11612][accessDate: 10-05-2010]
Sclerocystic ovary syndrome[accessedResource: SNOMEDCT:69878008][accessDate: 10-05-2010]
Ovarian Degeneration, Sclerocystic
DOID:11612
GeneRIF:11809921
GeneRIF:15757855
GeneRIF:16030171
GeneRIF:14715867
GeneRIF:16275260
Polycystic ovarian disease[accessedResource: SNOMEDCT:69878008][accessDate: 10-05-2010]
GeneRIF:15333250
GeneRIF:15705377
A complex disorder characterized by infertility, HIRSUTISM; OBESITY; and various menstrual disturbances such as OLIGOMENORRHEA; AMENORRHEA; ANOVULATION. Polycystic ovary syndrome is usually associated with bilateral enlarged ovaries studded with atretic follicles, not with cysts. The term, polycystic ovary, is misleading.[accessedResource: MSH:D011085][accessDate: 10-05-2010]
GeneRIF:15579759
GeneRIF:15533384
GeneRIF:12727985
Stein-Leventhal synd.
GeneRIF:12161543
GeneRIF:12502516
N-(1,2,3,10-tetramethoxy-9-oxo-5,6,7,9-tetrahydrobenzo[a]heptalen-7-yl)acetamide
colchicine
C22H25NO6
COC1=CC=C2C(=CC1=O)C(CCc3cc(OC)c(OC)c(OC)c23)NC(C)=O
http://www.ebi.ac.uk/efo/EFO_0001512
InChI=1/C22H25NO6/c1-12(24)23-16-8-6-13-10-19(27-3)21(28-4)22(29-5)20(13)14-7-9-18(26-2)17(25)11-15(14)16/h7,9-11,16H,6,8H2,1-5H3,(H,23,24)/f/h23H
CHEBI:23359
InChIKey=IAKHMKGGTNLKSZ-MPIMZMORCX
A carbotricyclic compound that has formula C22H25NO6.
THP1
THP-1
James Malone
CHEBI:25048
linolenic acids
linolenic acid
http://www.ebi.ac.uk/efo/EFO_0001563
linoleic acids
JAR
James Malone
Ele Holloway
(22R,23R)-2alpha,3alpha,22,23-tetrahydroxy-7a-homo-7-oxa-5alpha-campestan-6-one
C28H48O6
A brassinosteroid that has formula C28H48O6.
http://www.ebi.ac.uk/efo/EFO_0002401
InChI=1/C28H48O6/c1-14(2)15(3)24(31)25(32)16(4)18-7-8-19-17-13-34-26(33)21-11-22(29)23(30)12-28(21,6)20(17)9-10-27(18,19)5/h14-25,29-32H,7-13H2,1-6H3/t15-,16-,17-,18+,19-,20-,21+,22-,23+,24+,25+,27+,28+/m0/s1
(22R,23R)-2alpha,3alpha,22,23-tetrahydroxy-6,7-seco-5alpha-campestano-6,7-lactone
CHEBI:28277
brassinolide
Ele Holloway
[H][C@@]1(CC[C@@]2([H])[C@]3([H])COC(=O)[C@@]4([H])C[C@H](O)[C@H](O)C[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)[C@@H](O)[C@H](O)[C@@H](C)C(C)C
InChIKey=IXVMHGVQKLDRKH-KNBKMWSGBW
James Malone
4-hydroxy-2-nonenal
InChI=1/C9H16O2/c1-2-3-4-6-9(11)7-5-8-10/h5,7-9,11H,2-4,6H2,1H3
4-Hydroxynonenal
A hydroxyaldehyde that has formula C9H16O2.
C9H16O2
4-Hydroxy-2,3-nonenal
http://www.ebi.ac.uk/efo/EFO_0001472
CHEBI:32585
InChIKey=JVJFIQYAHPMBBX-UHFFFAOYAI
4-hydroxynon-2-enal
[H]C(=CC=O)C(O)CCCCC
birnlex_7077
Theiler stage 22
Tomasz Adamusiak
Jie Zheng
Sicca (Sjogren's) syndrome[accessedResource: DOID:12894][accessDate: 10-05-2010]
Sjogren's syndrome (disorder)[accessedResource: SNOMEDCT:83901003][accessDate: 10-05-2010]
Sjogren syndrome
Sjögren's disease
SJOGREN'S SYNDROME
An autoimmune disorder affecting the salivary and lacrimal glands. Morphologically, it is characterized by the presence of lymphocytic and plasmacytic infiltrates which cause destruction of these glands. It results in dry mouth and dry eyes. It may be associated with the presence of other autoimmune disorders, including rheumatoid arthritis and lupus erythematosus.[accessedResource: NCIt:C26883][accessDate: 10-05-2010]
Sjogren's disease[accessedResource: SNOMEDCT:83901003][accessDate: 10-05-2010]
Syndrome, Sicca
NCIt:C26883
Sicca Syndrome[accessedResource: MSH:D012859][accessDate: 10-05-2010]
James Malone
Sicca (Sjogren's) syndrome
Sjogren's disease
Chronic inflammatory and autoimmune disease in which the salivary and lacrimal glands undergo progressive destruction by lymphocytes and plasma cells resulting in decreased production of saliva and tears. The primary form, often called sicca syndrome, involves both KERATOCONJUNCTIVITIS SICCA and XEROSTOMIA. The secondary form includes, in addition, the presence of a connective tissue disease, usually rheumatoid arthritis.[accessedResource: MSH:D012859][accessDate: 10-05-2010]
An autoimmune disorder affecting the salivary and lacrimal glands. Morphologically, it is characterized by the presence of lymphocytic and plasmacytic infiltrates which cause destruction of these glands. It results in dry mouth and dry eyes. It may be associated with the presence of other autoimmune disorders, including rheumatoid arthritis and lupus erythematosus.
Sjgren's syndrome (disorder)
Sjögren's syndrome (disorder)
Sjogrens Syndrome[accessedResource: MSH:D012859][accessDate: 10-05-2010]
Mikulicz disease
MSH:D012859
DOID:12894
Sjögren's syndrome[accessedResource: SNOMEDCT:83901003][accessDate: 10-05-2010]
SNOMEDCT:83901003
Sjögren's syndrome
Sjogrens Syndrome
Sjogren's syndrome (disorder)
Chronic inflammatory and autoimmune disease in which the salivary and lacrimal glands undergo progressive destruction by lymphocytes and plasma cells resulting in decreased production of saliva and tears. The primary form, often called sicca syndrome, involves both KERATOCONJUNCTIVITIS SICCA and XEROSTOMIA. The secondary form includes, in addition, the presence of a connective tissue disease, usually rheumatoid arthritis.
Sjgren's syndrome (disorder)[accessedResource: DOID:12894][accessDate: 10-05-2010]
Sjögren's syndrome (disorder)[accessedResource: SNOMEDCT:83901003][accessDate: 10-05-2010]
SJOGREN'S SYNDROME[accessedResource: NCIt:C26883][accessDate: 10-05-2010]
Sjögren's disease[accessedResource: SNOMEDCT:83901003][accessDate: 10-05-2010]
FBbt:00005538
ClyP2
ClyP2[accessedResource: FBbt:00005538][accessDate: 10-05-2010]
clypeo-labral primordium
James Malone
Ele Holloway
JURKAT cell
JM cell
Human T cell leukemia, established from the peripheral blood of a 14-year-old boy with acute lymphoblastic leukemia (ALL) at first relapse in 1976; often this cell line is called "JM (JURKAT and JM are derived from the same patient and are sister clones), occasionally JM may be a subclone with somewhat divergent features.[accessedResource: BTO:0000661][accessDate: 10-05-2010]
true
BTO:0000661
JM cell[accessedResource: BTO:0000661][accessDate: 10-05-2010]
Duplicate with EFO_0002796
2.2
JM
JURKAT cell[accessedResource: BTO:0000661][accessDate: 10-05-2010]
James Malone
obsolete_Jurkat
Human T cell leukemia, established from the peripheral blood of a 14-year-old boy with acute lymphoblastic leukemia (ALL) at first relapse in 1976; often this cell line is called "JM (JURKAT and JM are derived from the same patient and are sister clones), occasionally JM may be a subclone with somewhat divergent features.
A cell of the B cell, T cell, or natural killer cell lineage.[accessedResource: CL:0000542][accessDate: 10-05-2010]
Any of the colorless weakly motile cells originating from stem cells and differentiating in lymphoid tissue (as of the thymus or bone marrow) that are the typical cellular elements of lymph, include the cellular mediators of immunity, and constitute 20 to 30 percent of the white blood cells of normal human blood.[accessedResource: BTO:0000775][accessDate: 10-05-2010]
lymphocyte
Any of the colorless weakly motile cells originating from stem cells and differentiating in lymphoid tissue (as of the thymus or bone marrow) that are the typical cellular elements of lymph, include the cellular mediators of immunity, and constitute 20 to 30 percent of the white blood cells of normal human blood.
James Malone
CL:0000542
BTO:0000775
A cell of the B cell, T cell, or natural killer cell lineage.
A disease of or relating to the manner that an organism conducts itself involving action and response to stimulation or the response of an individual, group, or species to its environment.
Other disorders of eating[accessedResource: ICD9:307.59][accessDate: 10-05-2010]
GeneRIF:12556907
EATING DISORDER NEC[accessedResource: ICD9:307.59][accessDate: 10-05-2010]
Psychiatric disorder
SNOMEDCT:192639003
ICD9:307
Other disorders of eating
Mental disorders NOS (disorder)
ICD9:307.9
GeneRIF:15386212
true
EATING DISORDER NEC
Mental disease[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
Other and unspecified special symptoms or syndromes, not elsewhere classified[accessedResource: ICD9:307.9][accessDate: 10-05-2010]
Mental disorder, NOS[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
[X]Mental illness NOS
GeneRIF:12082566
Psychiatric illness
[X]Mental illness NOS[accessedResource: SNOMEDCT:192637001][accessDate: 10-05-2010]
GeneRIF:14744462
[X]Other eating disorders (disorder)
SNOMEDCT:74732009
Other and unspecified special symptoms or syndromes, not elsewhere classified
SPECIAL SYMPTOM NEC/NOS
[X]Mental disorder, not otherwise specified
Mental health disorder
GeneRIF:12218657
DOID:150
James Malone
Mental disorder[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
GeneRIF:11884350
Mental health disorder[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
GeneRIF:14645456
[X]Other eating disorders (disorder)[accessedResource: SNOMEDCT:268721001][accessDate: 10-05-2010]
obsolete_behavioural disease
ICD9:307.59
Mental disorders NOS
behavioral disease
SNOMEDCT:268721001
[X]Other eating disorders
SPECIAL SYMPTOM NEC/NOS[accessedResource: ICD9:307.9][accessDate: 10-05-2010]
GeneRIF:14966479
Mental disease
[X]Other eating disorders[accessedResource: SNOMEDCT:268721001][accessDate: 10-05-2010]
GeneRIF:12605098
[X]Mental disorder, not otherwise specified (disorder)[accessedResource: SNOMEDCT:192637001][accessDate: 10-05-2010]
GeneRIF:14523627
ICD9:290-319.99
[X]Mental disorder, not otherwise specified[accessedResource: SNOMEDCT:192637001][accessDate: 10-05-2010]
Mental disorders NOS[accessedResource: SNOMEDCT:192639003][accessDate: 10-05-2010]
GeneRIF:12814372
GeneRIF:15341606
Psychiatric illness[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
Mental disorder, NOS
Mental disorder (disorder)[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
ICD9:307.5
Mental illness[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
Mental illness
ICD9:300-316.99
Mental disorder (disorder)
A disease of or relating to the manner that an organism conducts itself involving action and response to stimulation or the response of an individual, group, or species to its environment.[accessedResource: DOID:150][accessDate: 10-05-2010]
Mental disorder
Mental disorders NOS (disorder)[accessedResource: SNOMEDCT:192639003][accessDate: 10-05-2010]
Psychiatric disorder[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
merged with EFO_0000677
SNOMEDCT:192637001
2.5
[X]Mental disorder, not otherwise specified (disorder)
3-Indolylessigsaeure
C10H9NO2
James Malone
http://www.ebi.ac.uk/efo/EFO_0001556
heteroauxin
1H-indol-3-ylacetic acid
(indol-3-yl)acetic acid
OC(=O)Cc1c[nH]c2ccccc12
Indoleacetic acid
InChI=1/C10H9NO2/c12-10(13)5-7-6-11-9-4-2-1-3-8(7)9/h1-4,6,11H,5H2,(H,12,13)/f/h12H
CHEBI:16411
2-(indol-3-yl)ethanoic acid
IAA
An indole-3-acetic acid that has formula C10H9NO2.
InChIKey=SEOVTRFCIGRIMH-XWKXFZRBCL
indole-3-acetic acid
IES
GM12891
In adult pterygotous insects, one of the paired organs of flight occurring on the mesothoracic segment.
James Malone
adult mesothoracic wing
A flight organ of the adult external thorax that is derived from a dorsal mesothoracic disc.
adult metathoracic wing
TGMA:0000197
wing
FBbt:00004729
In adult pterygotous insects, the paired organs of flight occurring on the metathoracic segment. In Diptera, the metathoracic wings are represented by the halteres.
A flight organ of the adult external thorax that is derived from a dorsal mesothoracic disc.[accessedResource: FBbt:00004729][accessDate: 10-05-2010]
TGMA:0000196
1: One of the movable feathered or membranous paired appendages by means of which a bird, bat, or insect is able to fly; also: such an appendage even though rudimentary if possessed by an animal belonging to a group characterized by the power of flight.n2: Any of various anatomical structures especially of a flying fish or flying lemur providing means of limited flight.[accessedResource: BTO:0001463][accessDate: 10-05-2010]
In adult pterygotous insects, one of the paired organs of flight occurring on the mesothoracic segment.[accessedResource: TGMA:0000196][accessDate: 10-05-2010]
adult mesothoracic wing[accessedResource: MAT:0000202][accessDate: 10-05-2010]
BTO:0001463
MAT:0000202
In adult pterygotous insects, the paired organs of flight occurring on the metathoracic segment. In Diptera, the metathoracic wings are represented by the halteres.[accessedResource: TGMA:0000197][accessDate: 10-05-2010]
1: One of the movable feathered or membranous paired appendages by means of which a bird, bat, or insect is able to fly; also: such an appendage even though rudimentary if possessed by an animal belonging to a group characterized by the power of flight.n2: Any of various anatomical structures especially of a flying fish or flying lemur providing means of limited flight.
adult metathoracic wing[accessedResource: MAT:0000202][accessDate: 10-05-2010]
James Malone
SNOMEDCT:362968007
Disorder of reproductive system (disorder)
Disorder of reproductive system[accessedResource: SNOMEDCT:362968007][accessDate: 10-05-2010]
reproductive system disease
genital system disease[accessedResource: DOID:15][accessDate: 10-05-2010]
Non-neoplastic Reproductive system disease[accessedResource: DOID:15][accessDate: 10-05-2010]
Disorder of reproductive system
Disorder of reproductive system (disorder)[accessedResource: SNOMEDCT:362968007][accessDate: 10-05-2010]
Tomasz Adamusiak
DOID:15
genital system disease
Non-neoplastic Reproductive system disease
true
chronic lymphoid leukemia
CLL
obsolete_chronic lymphocytic leukemia
OntologyMappingImporter following DOID:1040
James Malone
Duplicate with chronic lymphocytic leukemia (EFO_0000095) use this instead
time to development of distant metastases
James Malone
oral squamous cell carcinoma
James Malone
CEMC1
Ele Holloway
James Malone
CHEBI:46661
asbesto
Asbest
http://www.ebi.ac.uk/efo/EFO_0001490
Fibrous incombustible mineral composed of magnesium and calcium silicates with or without other elements.
asbestos
Caco-2
James Malone
polycythemia vera
Tomasz Adamusiak
James Malone
NCIt:C32231
BTO:0001845
bronchial epithelium
James Malone
B-0 B cell[accessedResource: CL:0000822][accessDate: 10-05-2010]
A conventional B cell subject to antigenic stimulation and dependent on T cell help and with a distinct surface marker expression pattern from B-1 B cells. These cells are CD43-negative.
B-2 B cell
small pre-BII cell
follicular B cell
B-0 B cell
CL:0000822
large pre-BII cell
B-2 B lymphocyte[accessedResource: CL:0000822][accessDate: 10-05-2010]
James Malone
follicular B cell[accessedResource: CL:0000822][accessDate: 10-05-2010]
B-2 B lymphocyte
A conventional B cell subject to antigenic stimulation and dependent on T cell help and with a distinct surface marker expression pattern from B-1 B cells. These cells are CD43-negative.[accessedResource: CL:0000822][accessDate: 10-05-2010]
http://www.arabidopsis.org/servlets/TairObject?id=1005158908&type=germplasm
CS57884 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158908&type=germplasm
CS57884
James Malone
NCIt:C55427
Memory Impairment Adverse Event
Memory Impairment Adverse Event[accessedResource: NCIt:C55427][accessDate: 10-05-2010]
memory impairment
James Malone
http://en.wikipedia.org/wiki/Rhesus_Macaque
Rhesus Macaque
http://www.ebi.ac.uk/efo/EFO_0002643
The Rhesus Macaque (Macaca mulatta), often called the Rhesus Monkey, is one of the best known species of Old World monkeys.
Macaca mulatta
James Malone
A leukocyte with a single non-segmented nucleus in the mature form.[accessedResource: CL:0000842][accessDate: 10-05-2010]
James Malone
A cell having only one nucleus, especially: MONOCYTE.
CL:0000842
A leukocyte with a single non-segmented nucleus in the mature form.
A cell having only one nucleus, especially: MONOCYTE.[accessedResource: BTO:0000878][accessDate: 10-05-2010]
BTO:0000878
mononuclear cell
SKMEL5
James Malone
Ele Holloway
NCIt:C15716
Population Study
Multidisciplinary study done at the population level or among the population groups, generally to find the cause, incidence or spread of the disease or to see the response to the treatment, nutrition or environment.
Multidisciplinary study done at the population level or among the population groups, generally to find the cause, incidence or spread of the disease or to see the response to the treatment, nutrition or environment.[accessedResource: NCIt:C15716][accessDate: 10-05-2010]
population based study
Tomasz Adamusiak
James Malone
MAT:0000350
sap
James Malone
DMS273
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0001590
C19H24N4O2
A carboxamidine that has formula C19H24N4O2.
4,4'-(1,5-pentanediylbis(oxy))bis-benzenecarboximidamide
4,4'-[pentane-1,5-diylbis(oxy)]dibenzenecarboximidamide
p,p'-(pentamethylenedioxy)dibenzamidine
CHEBI:45081
InChIKey=XDRYMKDFEDOLFX-JODGMDMNCA
InChI=1/C19H24N4O2/c20-18(21)14-4-8-16(9-5-14)24-12-2-1-3-13-25-17-10-6-15(7-11-17)19(22)23/h4-11H,1-3,12-13H2,(H3,20,21)(H3,22,23)/f/h20,22H,21,23H2
pentamidine
4,4'-(pentamethylenedioxy)dibenzamidine
1,5-bis(4-amidinophenoxy)pentane
NC(=N)c1ccc(OCCCCCOc2ccc(cc2)C(N)=N)cc1
http://www.arabidopsis.org/servlets/TairObject?id=1005158594&type=germplasm
CS57570 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158594&type=germplasm
CS57570
James Malone
PMID: 12753
972h- is a yeast strain as described in article PMID 12753
972h-
James Malone
ZR75B
James Malone
NCIt:C32824
FMA:13354
Respiratory Muscles
Respiratory Muscles[accessedResource: NCIt:C32824][accessDate: 10-05-2010]
intercostal muscle
James Malone
WB-F344
James Malone
Ele Holloway
simple cystadenoma
James Malone
Ele Holloway
NIFSTD:sao1703115805
MAT:0000484
lung apical
Apical is a geometric modifier describing the tip of a pyramidal or rounded structure. For example, lung apical.
apical
Tomasz Adamusiak
James Malone
NCIH2126
James Malone
Ele Holloway
NCIH1092
James Malone
Ele Holloway
suprachiasmatic nucleus
James Malone
Ele Holloway
ENCODE cell line
embryonic cell
urocortin I
http://jaxmice.jax.org/strain/009292.html
ILSXISS114/TejJ
Tomasz Adamusiak
2.5
true
obsolete_myelodysplastic syndrome (MDS)-like
use EFO_0000198
JCRB0137
RERF-LC-KJ
James Malone
Ele Holloway
BTO:0001143
An intermediate usually quiescent stage of a metamorphic insect (as a bee, moth, or beetle) that occurs between the larva and the imago, is usually enclosed in a cocoon or protective covering, and undergoes internal changes by which larval structures are replaced by those typical of the imago.
An intermediate usually quiescent stage of a metamorphic insect (as a bee, moth, or beetle) that occurs between the larva and the imago, is usually enclosed in a cocoon or protective covering, and undergoes internal changes by which larval structures are replaced by those typical of the imago.[accessedResource: BTO:0001143][accessDate: 10-05-2010]
pupa
The most common type of liposarcoma. It is composed of round to oval mesenchymal cells, small signet ring lipoblasts, and a rich network of capillaries in a myxoid stroma.
The most common type of liposarcoma. It is composed of round to oval mesenchymal cells, small signet ring lipoblasts, and a rich network of capillaries in a myxoid stroma.[accessedResource: NCIt:C3735][accessDate: 10-05-2010]
Myxoid liposarcoma (disorder)[accessedResource: DOID:5363][accessDate: 10-05-2010]
Liposarcomas, Myxoid
SNOMEDCT:404069006
A liposarcoma containing myxomatous tissue. (Dorland, 27th ed)
Myxoliposarcoma
SNOMEDCT:27849002
Liposarcomas, Myxoid[accessedResource: MSH:D018208][accessDate: 10-05-2010]
Myxoid liposarcoma (disorder)
NCIt:C3735
Myxoliposarcoma[accessedResource: SNOMEDCT:27849002][accessDate: 10-05-2010]
DOID:5363
A liposarcoma containing myxomatous tissue. (Dorland, 27th ed)[accessedResource: MSH:D018208][accessDate: 10-05-2010]
myxoid liposarcoma
Myxoid liposarcoma (morphologic abnormality)
Myxoid liposarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:27849002][accessDate: 10-05-2010]
MSH:D018208
GeneRIF:12915480
James Malone
RGD:10044
NIFSTD:birnlex_320
Wistar
Tomasz Adamusiak
James Malone
12-Tetradecanoylphorbol 13-acetate
phorbol 13-acetate 12-myristate
A phorbol ester that has formula C36H56O8.
12-O-Tetradecanoylphorbol 13-acetate
C36H56O8
InChI=1/C36H56O8/c1-7-8-9-10-11-12-13-14-15-16-17-18-29(39)43-32-24(3)35(42)27(30-33(5,6)36(30,32)44-25(4)38)20-26(22-37)21-34(41)28(35)19-23(2)31(34)40/h19-20,24,27-28,30,32,37,41-42H,7-18,21-22H2,1-6H3/t24-,27+,28-,30-,32-,34-,35-,36-/m1/s1
CHEBI:37537
phorbol 12-tetradecanoate 13-acetate
[H][C@@]12C=C(CO)C[C@]3(O)C(=O)C(C)=C[C@@]3([H])[C@@]1(O)[C@H](C)[C@@H](OC(=O)CCCCCCCCCCCCC)[C@]1(OC(C)=O)[C@@]2([H])C1(C)C
http://www.ebi.ac.uk/efo/EFO_0002493
InChIKey=PHEDXBVPIONUQT-RGYGYFBIBK
PMA
(1aR,1bS,4aR,7aS,7bS,8R,9R,9aS)-9a-acetoxy-4a,7b-dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1a,1b,4,4a,5,7a,7b,8,9,9a-decahydro-1H-cyclopropa[3,4]benzo[1,2-e]azulen-9-yl tetradecanoate
James Malone
Ele Holloway
tetradecanoylphorbol acetate
TT3E
James Malone
Ele Holloway
RWPE1
Ele Holloway
James Malone
NCIH2122
James Malone
Ele Holloway
MO_568
stimulus or stress design
Tomasz Adamusiak
true
Medial geniculate nuclei
Medial geniculate complex[accessedResource: FMA:62211][accessDate: 10-05-2010]
Medial geniculate body
James Malone
Medial geniculate body[accessedResource: FMA:62211][accessDate: 10-05-2010]
Medial geniculate nuclei[accessedResource: FMA:62211][accessDate: 10-05-2010]
FMA:62211
Medial geniculate complex
Medial geniculate nucleus
1.6
obsolete_medial geniculate nucleus
Duplication: use class EFO_0001968
Medial geniculate nucleus[accessedResource: FMA:62211][accessDate: 10-05-2010]
MO_179
Tomasz Adamusiak
James Malone
MO_155
A derived unit which is a standard measure of the amount of space occupied by any substance, whether solid, liquid, or gas.
volume unit
http://www.ebi.ac.uk/efo/EFO_0001711
A volume unit is a derived unit which is a standard measure of the amount of space occupied by any substance, whether solid, liquid, or gas.
true
Jie Zheng
lipoxin A4
5S,6R,15S-Trihydroxy-7E,9E,11Z,13E-eicosatetraenoic acid
LXA4
5S,6R-LipoxinA4
NIFSTD:nifext_5168
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001565
(7E,9E,11Z,13E)-(5S,6R,15S)-5,6,15-Trihydroxyicosa-7,9,11,13-tetraenoic acid
CCCCC[C@H](O)\\C=C\\C=C/C=C/C=C/[C@@H](O)[C@@H](O)CCCC(O)=O
InChI=1/C20H32O5/c1-2-3-8-12-17(21)13-9-6-4-5-7-10-14-18(22)19(23)15-11-16-20(24)25/h4-7,9-10,13-14,17-19,21-23H,2-3,8,11-12,15-16H2,1H3,(H,24,25)/b6-4-,7-5+,13-9+,14-10+/t17-,18+,19-/m0/s1/f/h24H
A lipoxin that has formula C20H32O5.
InChIKey=IXAQOQZEOGMIQS-RKIRPOAEDD
C20H32O5
A fat body is an insect gland dorsal to the insect gut, with a function analogous to that of the vertebrate liver. It is a storage organ for fats, glycogen and protein and is a major site of intermediary metabolism.
An invertebrate tissue which serves as a store of lipids and in nwhich a great deal of catabolic and anabolic activity occurs
.
A fat body is an insect gland dorsal to the insect gut, with a function analogous to that of the vertebrate liver. It is a storage organ for fats, glycogen and protein and is a major site of intermediary metabolism.[accessedResource: TGMA:0001856][accessDate: 10-05-2010]
.[accessedResource: FBbt:00005066][accessDate: 10-05-2010]
TGMA:0001856
MAT:0000096
TADS:0000321
An invertebrate tissue which serves as a store of lipids and in nwhich a great deal of catabolic and anabolic activity occurs[accessedResource: MAT:0000096][accessDate: 10-05-2010]
fat body sensu invertebrata
FBbt:00005066
James Malone
Lepromatous leprosy [type L]
Full lepromatous leprosy
MSH:D015440
type L leprosy[accessedResource: DOID:10887][accessDate: 10-05-2010]
Type LL leprosy[accessedResource: SNOMEDCT:21560005][accessDate: 10-05-2010]
Full lepromatous leprosy[accessedResource: SNOMEDCT:21560005][accessDate: 10-05-2010]
Leprosy, Nodular[accessedResource: MSH:D015440][accessDate: 10-05-2010]
A chronic communicable infection which is a principal or polar form of LEPROSY. This disorder is caused by MYCOBACTERIUM LEPRAE and produces diffuse granulomatous skin lesions in the form of nodules, macules, or papules. The peripheral nerves are involved symmetrically and neural sequelae occur in the advanced stage.[accessedResource: MSH:D015440][accessDate: 10-05-2010]
Lepromatous leprosy [type L][accessedResource: DOID:10887][accessDate: 10-05-2010]
GeneRIF:15726416
Leprosy, Cutaneous[accessedResource: MSH:D015440][accessDate: 10-05-2010]
James Malone
LL - Full lepromatous leprosy[accessedResource: SNOMEDCT:21560005][accessDate: 10-05-2010]
Type LL leprosy
ICD9:030.0
type L leprosy
Nodular Leprosy
Lepromatous leprosy (disorder)
Leprosies, Lepromatous
Leprosies, Cutaneous
GeneRIF:12743658
LL - Full lepromatous leprosy
Lepromatous leprosy (disorder)[accessedResource: SNOMEDCT:21560005][accessDate: 10-05-2010]
Leprosies, Nodular
Lepromatous Leprosies[accessedResource: MSH:D015440][accessDate: 10-05-2010]
Cutaneous Leprosy
SNOMEDCT:21560005
Nodular Leprosies[accessedResource: MSH:D015440][accessDate: 10-05-2010]
GeneRIF:12445799
lepromatous leprosy
Leprosies, Cutaneous[accessedResource: MSH:D015440][accessDate: 10-05-2010]
A chronic communicable infection which is a principal or polar form of LEPROSY. This disorder is caused by MYCOBACTERIUM LEPRAE and produces diffuse granulomatous skin lesions in the form of nodules, macules, or papules. The peripheral nerves are involved symmetrically and neural sequelae occur in the advanced stage.
DOID:10887
An alpha-tocopherol that has formula C29H50O2.
(2R)-2,5,7,8-tetramethyl-2-[(4R,8R)-4,8,12-trimethyltridecyl]-3,4-dihydro-2H-chromen-6-ol
CHEBI:18145
InChI=1/C29H50O2/c1-20(2)12-9-13-21(3)14-10-15-22(4)16-11-18-29(8)19-17-26-25(7)27(30)23(5)24(6)28(26)31-29/h20-22,30H,9-19H2,1-8H3/t21-,22-,29-/m1/s1
(2R,4'R,8'R)-alpha-tocopherol
CC(C)CCC[C@@H](C)CCC[C@@H](C)CCC[C@]1(C)CCc2c(C)c(O)c(C)c(C)c2O1
5,7,8-trimethyltocol
(2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL
InChIKey=GVJHHUAWPYXKBD-IEOSBIPEBS
d-alpha-tocopherol
(R,R,R)-alpha-tocopherol
James Malone
(+)-alpha-tocopherol
Vitamin E
C29H50O2
http://www.ebi.ac.uk/efo/EFO_0001465
IBL4
James Malone
Ele Holloway
James Malone
EMAPA:17550
BTO:0000041
Brain structure that is located ventrocaudal to the cerebellum and just anterior to the spinal cord and contains the sensory and motor nuclei of six cranial nerves. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished here.
Organ component of neuraxis that has as its parts the medullary reticular formation, inferior olivary complex and cochlear nuclear complex, among other structures. Examples: There is only one medulla oblongata.
EHDAA:7588
medulla oblonmgata
medulla oblonmgata[accessedResource: MAT:0000111][accessDate: 10-05-2010]
myelencephalon[accessedResource: NIFSTD:birnlex_957][accessDate: 10-05-2010]
brainstem[accessedResource: MAT:0000111][accessDate: 10-05-2010]
NIFSTD:birnlex_957
Bulb
Tomasz Adamusiak
The part of the vertebrate brain that is continuous posteriorly with the spinal cord and that contains the centers controlling involuntary vital functions.[accessedResource: BTO:0000041][accessDate: 10-05-2010]
The part of the vertebrate brain that is continuous posteriorly with the spinal cord and that contains the centers controlling involuntary vital functions.
brainstem
medulla oblongata
SAEL:13
SAEL:65
FMAID:62004
Brain structure that is located ventrocaudal to the cerebellum and just anterior to the spinal cord and contains the sensory and motor nuclei of six cranial nerves. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished here.[accessedResource: ZFA:0000545][accessDate: 10-05-2010]
myelencephalon
Metepencephalon[accessedResource: FMAID:62004][accessDate: 10-05-2010]
Bulb[accessedResource: FMAID:62004][accessDate: 10-05-2010]
MAT:0000111
MA:0000206
EV:0100275
Metepencephalon
Organ component of neuraxis that has as its parts the medullary reticular formation, inferior olivary complex and cochlear nuclear complex, among other structures. Examples: There is only one medulla oblongata.[accessedResource: FMAID:62004][accessDate: 10-05-2010]
ZFA:0000545
TAO:0000545
http://www.arabidopsis.org/servlets/TairObject?id=1005158847&type=germplasm
CS57823 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158847&type=germplasm
CS57823
James Malone
http://www.ebi.ac.uk/efo/EFO_0001535
2-phenyl-4H-benzopyran-4-one
2-phenyl-4H-1-benzopyran-4-one
A flavone that has formula C15H10O2.
CHEBI:42491
2-phenyl-gamma-benzopyrone
C15H10O2
Flavon
O=c1cc(oc2ccccc12)-c1ccccc1
InChIKey=VHBFFQKBGNRLFZ-UHFFFAOYAG
2-phenyl-4H-chromen-4-one
InChI=1/C15H10O2/c16-13-10-15(11-6-2-1-3-7-11)17-14-9-5-4-8-12(13)14/h1-10H
flavone
2-phenylchromone
CL:0000080
A cell which moves among different tissues of the body, via blood, lymph, or other medium.
A cell which moves among different tissues of the body, via blood, lymph, or other medium.[accessedResource: CL:0000080][accessDate: 10-05-2010]
circulating cell
James Malone
Ele Holloway
true
A derived unit which is a standard measure of the mass of a homogeneous substance containing 6.02 x 1023 atoms or molecules.
molar mass unit
FMAID:3884
Distal portion of anterior descending branch of left coronary artery
Distal portion of anterior descending branch of left coronary artery[accessedResource: FMAID:3884][accessDate: 10-05-2010]
distal portion of anterior interventricular branch of left coronary artery
Tomasz Adamusiak
Jie Zheng
James Malone
HCC3153
pyrethroid ester insecticides
http://www.ebi.ac.uk/efo/EFO_0001873
CHEBI:39116
pyrethroid ester insecticide
James Malone
FBbt:00005072
circular visceral muscle fiber
circular visceral muscle fiber[accessedResource: FBbt:00005072][accessDate: 10-05-2010]
circular visceral muscle fibers
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158607&type=germplasm
CS57583 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158607&type=germplasm
CS57583
James Malone
DOID:13315
recurrent pancreatitis (disorder)
GeneRIF:12131767
Relapsing pancreatitis
relapsing pancreatitis[accessedResource: DOID:13315][accessDate: 10-05-2010]
chronic pancreatitis (disorder) [Ambiguous][accessedResource: DOID:13315][accessDate: 10-05-2010]
SNOMEDCT:235494005
GeneRIF:14657708
INFLAMMATION of the PANCREAS that is characterized by recurring or persistent ABDOMINAL PAIN with or without STEATORRHEA or DIABETES MELLITUS. It is characterized by the irregular destruction of the pancreatic parenchyma which may be focal, segmental, or diffuse.
GeneRIF:11950817
ICD9:577.1
CP - chronic pancreatitis[accessedResource: DOID:13315][accessDate: 10-05-2010]
INFLAMMATION of the PANCREAS that is characterized by recurring or persistent ABDOMINAL PAIN with or without STEATORRHEA or DIABETES MELLITUS. It is characterized by the irregular destruction of the pancreatic parenchyma which may be focal, segmental, or diffuse.[accessedResource: MSH:D050500][accessDate: 10-05-2010]
GeneRIF:15097871
Pancreatitis, recurrent
GeneRIF:15855826
GeneRIF:12647793
GeneRIF:15802940
Recurrent pancreatitis[accessedResource: SNOMEDCT:233870001][accessDate: 10-05-2010]
GeneRIF:15097853
GeneRIF:12142743
Relapsing pancreatitis (disorder)
CP - chronic pancreatitis
Relapsing pancreatitis (disorder)[accessedResource: SNOMEDCT:234689009][accessDate: 10-05-2010]
chronic pancreatitis (disorder)[accessedResource: DOID:13315][accessDate: 10-05-2010]
SNOMEDCT:233870001
MSH:D050500
GeneRIF:15749232
GeneRIF:12808117
SNOMEDCT:234689009
chronic pancreatitis (disorder) [Ambiguous]
Recurrent pancreatitis (disorder)[accessedResource: SNOMEDCT:233870001][accessDate: 10-05-2010]
James Malone
Chronic pancreatitis (disorder)
GeneRIF:15066699
chronic pancreatitis
1.8
true
ArrayExpress production team
An experiment in which re-sequencing technology (Solexa/454) is used to generate sequence which can be used to determine nucleic acid sequence, analyse the transcibed regions of the genome, or to quantitate transcript abundance
obsolete_re-sequencing
James Malone
Split into two terms. RNA-seq and DNA-seq
ZFS:0000033
hatching stage
James Malone
BTO:0000028
pancreatic acinar cell[accessedResource: BTO:0000028][accessDate: 10-05-2010]
Cells of the pancreas that secrete digestive enzymes, the archetypal secretory cell upon which much of the early work on the sequence of events in the secretory process was done.
exocrine pancreas cell
pancreatic acinar cell
pancreatic acinus
Cells of the pancreas that secrete digestive enzymes, the archetypal secretory cell upon which much of the early work on the sequence of events in the secretory process was done.[accessedResource: BTO:0000028][accessDate: 10-05-2010]
pancreatic acinus[accessedResource: BTO:0000028][accessDate: 10-05-2010]
Tomasz Adamusiak
Jie Zheng
http://www.informatics.jax.org/searches/reference.cgi?7550
C57BL/10 is a mouse strain as described in Jackson Laboratory http://www.informatics.jax.org/searches/reference.cgi?7550
C57BL/10
James Malone
PLB985
James Malone
Ele Holloway
C22H24ClFN4O3
Iressa
James Malone
N-(3-chloro-4-fluorophenyl)-7-methoxy-6-(3-morpholin-4-ylpropoxy)quinazolin-4-amine
gefitinib
CHEBI:49668
A quinazoline that has formula C22H24ClFN4O3.
InChI=1/C22H24ClFN4O3/c1-29-20-13-19-16(12-21(20)31-8-2-5-28-6-9-30-10-7-28)22(26-14-25-19)27-15-3-4-18(24)17(23)11-15/h3-4,11-14H,2,5-10H2,1H3,(H,25,26,27)/f/h27H
http://www.ebi.ac.uk/efo/EFO_0001541
N-(3-chloro-4-fluorophenyl)-7-methoxy-6-(3-(4-morpholinyl)propoxy)-4-quinazolinamine
COc1cc2ncnc(Nc3ccc(F)c(Cl)c3)c2cc1OCCCN1CCOCC1
4-(3'-chloro-4'-fluoroanilino)-7-methoxy-6-(3-morpholinopropoxy)quinazoline
ZD 1839
InChIKey=XGALLCVXEZPNRQ-LELJVTLKCM
GM11832
James Malone
GM11830
James Malone
an increase in size of the cardiac tissue, not due to increased cell number[accessedResource: MP:0001625][accessDate: 10-05-2010]
an increase in size of the cardiac tissue, not due to increased cell number
James Malone
MP:0001625
myocardial hypertrophy[accessedResource: MP:0001625][accessDate: 10-05-2010]
myocardial hypertrophy
cardiac hypertrophy
Ele Holloway
auditory hair cell
A mechanoreceptor cell located in the inner ear that is sensitive to auditory stimuli. The accessory sensory structures are arranged so that appropriate stimuli cause movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system.
auditory hair cell[accessedResource: CL:0000202][accessDate: 10-05-2010]
A mechanoreceptor cell located in the organ of Corti that is sensitive to auditory stimuli and in the vestibular apparatus that is sensitive to movement of the head. In each case the accessory sensory structures are arranged so that appropriate stimuli cause movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system.
NIFSTD:sao630986029
Tomasz Adamusiak
cochlear hair cell
James Malone
CL:0000202
A mechanoreceptor cell located in the inner ear that is sensitive to auditory stimuli. The accessory sensory structures are arranged so that appropriate stimuli cause movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system.[accessedResource: CL:0000202][accessDate: 10-05-2010]
MO_902
disease state design
Tomasz Adamusiak
anticholesteremic
A substance used to lower plasma cholesterol levels.
anticholesteremic drugs
http://www.ebi.ac.uk/efo/EFO_0001856
anticholesteremic drug
hypocholesteremic agent
James Malone
anticholesteremic agent
CHEBI:35821
cholesterol inhibitor
[OEtH]
http://www.ebi.ac.uk/efo/EFO_0001531
InChI=1/C2H6O/c1-2-3/h3H,2H2,1H3
alcohol etilico
alcool ethylique
C2H5OH
Dehydrated ethanol
ethanol
Aethylalkohol
spiritus vini
NIFSTD:nlx_chem_20090205
etanol
Methylcarbinol
Aethanol
InChIKey=LFQSCWFLJHTTHZ-UHFFFAOYAB
alcohol
An ethanol that has formula C2H6O.
1-hydroxyethane
Alkohol
hydroxyethane
EtOH
CCO
Tomasz Adamusiak
C2H6O
[CH2Me(OH)]
James Malone
Ethyl alcohol
cleavage stage
James Malone
1,10-phenanthroline
o-Phenanthroline
phen
A phenanthroline that has formula C12H8N2.
http://www.ebi.ac.uk/efo/EFO_0002483
Ele Holloway
InChIKey=DGEZNRSVGBDHLK-UHFFFAOYAW
c1cnc2c(c1)ccc1cccnc21
CHEBI:44975
4,5-diazaphenanthrene
James Malone
orthophenanthroline
C12H8N2
InChI=1/C12H8N2/c1-3-9-5-6-10-4-2-8-14-12(10)11(9)13-7-1/h1-8H
GeneRIF:12736724
GeneRIF:15140234
GeneRIF:15827341
GeneRIF:12239452
GeneRIF:15572761
GeneRIF:15150307
GeneRIF:11962515
GeneRIF:12459645
GeneRIF:15833878
GeneRIF:15547691
Malignant melanoma (morphologic abnormality)
Malignant Melanoma[accessedResource: MSH:D008545][accessDate: 10-05-2010]
GeneRIF:15208686
GeneRIF:14991539
GeneRIF:12243754
GeneRIF:15073111
GeneRIF:14719109
GeneRIF:14713106
GeneRIF:15161053
GeneRIF:15146471
GeneRIF:12482591
Naevocarcinoma
GeneRIF:12189238
GeneRIF:12230496
GeneRIF:12704387
Melanosarcoma[accessedResource: SNOMEDCT:372244006][accessDate: 10-05-2010]
GeneRIF:15592448
GeneRIF:14666660
GeneRIF:15024080
GeneRIF:11992541
GeneRIF:15716025
GeneRIF:11992548
GeneRIF:15466193
GeneRIF:12939282
GeneRIF:15210734
GeneRIF:15998788
GeneRIF:11809675
GeneRIF:12183361
GeneRIF:15848191
GeneRIF:15184373
GeneRIF:15856458
GeneRIF:12789289
GeneRIF:12759390
GeneRIF:14695152
GeneRIF:14727087
GeneRIF:15724013
GeneRIF:11828258
GeneRIF:12072543
GeneRIF:12014625
GeneRIF:12665595
GeneRIF:15607961
GeneRIF:14646619
GeneRIF:12198771
GeneRIF:15855653
malignant melanoma NOS (morphologic abnormality)[accessedResource: DOID:1909][accessDate: 10-05-2010]
GeneRIF:15753377
GeneRIF:12894561
GeneRIF:11801603
GeneRIF:12140376
GeneRIF:14732231
GeneRIF:16272362
GeneRIF:11830592
GeneRIF:15856464
GeneRIF:15897876
Melanomas[accessedResource: MSH:D008545][accessDate: 10-05-2010]
GeneRIF:15093732
GeneRIF:12702150
GeneRIF:15809735
GeneRIF:12777976
GeneRIF:12170182
GeneRIF:16129781
GeneRIF:15277467
SNOMEDCT:372244006
GeneRIF:15362372
Malignant melanoma (disorder)[accessedResource: SNOMEDCT:372244006][accessDate: 10-05-2010]
GeneRIF:12619120
GeneRIF:12028585
GeneRIF:15856016
GeneRIF:15386421
GeneRIF:12208877
GeneRIF:15313890
malignant melanoma, morphology (morphologic abnormality)[accessedResource: DOID:1909][accessDate: 10-05-2010]
GeneRIF:15782137
GeneRIF:15608673
MM - Malignant melanoma[accessedResource: SNOMEDCT:2092003][accessDate: 10-05-2010]
GeneRIF:15009102
GeneRIF:12783933
Malignant Melanomas
GeneRIF:16189525
GeneRIF:16021575
GeneRIF:12516095
GeneRIF:14581607
GeneRIF:14618632
GeneRIF:14583455
Malignant melanoma (disorder)
[M]Malignant melanoma NOS (morphologic abnormality)
GeneRIF:12682852
GeneRIF:15694309
GeneRIF:14961576
GeneRIF:11828253
GeneRIF:15998953
GeneRIF:14555513
GeneRIF:12655789
GeneRIF:12883362
GeneRIF:16040804
GeneRIF:12376466
GeneRIF:12067988
GeneRIF:12218055
GeneRIF:12230495
GeneRIF:12439754
GeneRIF:14508519
GeneRIF:15492811
Malignant melanoma
GeneRIF:12168790
GeneRIF:12538712
GeneRIF:15714116
GeneRIF:12068308
GeneRIF:12821780
Malignant melanoma, NOS
GeneRIF:12060397
GeneRIF:12631591
GeneRIF:12750156
GeneRIF:11844832
GeneRIF:16232302
GeneRIF:15140228
GeneRIF:15014019
GeneRIF:12021307
GeneRIF:11807902
GeneRIF:11822878
GeneRIF:12018852
GeneRIF:15107545
GeneRIF:15161700
GeneRIF:16354196
Melanosarcoma
GeneRIF:14500642
GeneRIF:15009703
GeneRIF:11828257
GeneRIF:15187113
GeneRIF:16081848
Malignant melanoma (morphologic abnormality)[accessedResource: SNOMEDCT:2092003][accessDate: 10-05-2010]
GeneRIF:12606943
GeneRIF:15814740
GeneRIF:15832175
GeneRIF:12777979
GeneRIF:15373782
GeneRIF:12696065
GeneRIF:12124804
GeneRIF:12618768
Malignant melanoma, no ICD-O subtype (morphologic abnormality)
GeneRIF:15743794
GeneRIF:14559981
GeneRIF:10449755
GeneRIF:12017286
MSH:D008545
GeneRIF:16103065
GeneRIF:15491322
GeneRIF:12706526
GeneRIF:11500805
GeneRIF:12454511
GeneRIF:16277028
GeneRIF:12823444
GeneRIF:11891198
SNOMEDCT:2092003
GeneRIF:16140982
GeneRIF:15383569
[M]Malignant melanoma NOS[accessedResource: SNOMEDCT:269503007][accessDate: 10-05-2010]
GeneRIF:12058259
GeneRIF:15834638
GeneRIF:12710945
GeneRIF:15149859
GeneRIF:15001714
GeneRIF:15993843
GeneRIF:15305155
GeneRIF:12161512
GeneRIF:15009726
GeneRIF:12459643
GeneRIF:12082534
GeneRIF:14675203
GeneRIF:16211213
GeneRIF:15714119
GeneRIF:12972299
GeneRIF:12490317
GeneRIF:14729600
GeneRIF:12080186
[M]Malignant melanoma NOS
GeneRIF:12533668
GeneRIF:11930117
Melanoma, NOS
GeneRIF:12096926
GeneRIF:12459646
GeneRIF:15024700
GeneRIF:15064726
GeneRIF:15026369
GeneRIF:15265913
GeneRIF:12445207
GeneRIF:15645118
GeneRIF:14630948
GeneRIF:15851010
GeneRIF:15328193
GeneRIF:15305164
GeneRIF:12074634
GeneRIF:14522897
GeneRIF:16098042
GeneRIF:12485936
GeneRIF:12209993
melanoma
NCIt:C3224
GeneRIF:12362978
GeneRIF:12140380
GeneRIF:15009721
GeneRIF:15557124
GeneRIF:15843590
GeneRIF:15564140
GeneRIF:15721302
GeneRIF:12920221
GeneRIF:15832174
GeneRIF:15373802
GeneRIF:14506702
GeneRIF:12235125
GeneRIF:16007121
GeneRIF:11936276
GeneRIF:12230498
GeneRIF:15955107
GeneRIF:12095976
GeneRIF:16098052
GeneRIF:15373781
GeneRIF:12875987
MM - Malignant melanoma
GeneRIF:15551350
GeneRIF:12670917
GeneRIF:15373779
GeneRIF:15843517
GeneRIF:12036934
GeneRIF:15305193
Melanoma, NOS[accessedResource: SNOMEDCT:2092003][accessDate: 10-05-2010]
GeneRIF:15210957
GeneRIF:15191558
A malignant neoplasm derived from cells that are capable of forming melanin, which may occur in the skin of any part of the body, in the eye, or, rarely, in the mucous membranes of the genitalia, anus, oral cavity, or other sites. It occurs mostly in adults and may originate de novo or from a pigmented nevus or malignant lentigo. Melanomas frequently metastasize widely, and the regional lymph nodes, liver, lungs, and brain are likely to be involved. The incidence of malignant skin melanomas is rising rapidly in all parts of the world. (Stedman, 25th ed; from Rook et al., Textbook of Dermatology, 4th ed, p2445)
GeneRIF:14612926
GeneRIF:12716902
GeneRIF:12883368
GeneRIF:11918086
GeneRIF:12883358
Malignant melanoma, morphology (morphologic abnormality)
GeneRIF:15201995
GeneRIF:12687014
GeneRIF:12384558
Melanomas, Malignant[accessedResource: MSH:D008545][accessDate: 10-05-2010]
GeneRIF:12950144
GeneRIF:11962738
GeneRIF:12072536
GeneRIF:15610525
GeneRIF:11992404
GeneRIF:14726258
GeneRIF:15832775
GeneRIF:15179189
GeneRIF:15880589
GeneRIF:12664607
GeneRIF:15201991
GeneRIF:15257316
Malignant melanoma, NOS[accessedResource: SNOMEDCT:2092003][accessDate: 10-05-2010]
GeneRIF:15781639
GeneRIF:12140383
GeneRIF:12855667
GeneRIF:12810628
GeneRIF:15816840
Melanomas
GeneRIF:12140378
GeneRIF:15610528
GeneRIF:11839575
[M]Malignant melanoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:269503007][accessDate: 10-05-2010]
GeneRIF:12927791
GeneRIF:15688405
GeneRIF:16008690
GeneRIF:15366927
GeneRIF:12850810
GeneRIF:15009731
Malignant melanoma NOS (morphologic abnormality)
GeneRIF:11884449
GeneRIF:15987741
GeneRIF:12208865
GeneRIF:15577328
GeneRIF:15869411
GeneRIF:12848854
James Malone
GeneRIF:14757863
GeneRIF:12670907
GeneRIF:14634801
Naevocarcinoma[accessedResource: DOID:1909][accessDate: 10-05-2010]
GeneRIF:12438452
GeneRIF:15014028
Malignant melanoma, no ICD-O subtype[accessedResource: SNOMEDCT:2092003][accessDate: 10-05-2010]
GeneRIF:15273735
GeneRIF:12839565
GeneRIF:15817166
GeneRIF:15469480
GeneRIF:15657897
GeneRIF:14735200
A malignant, usually aggressive tumor composed of atypical, neoplastic melanocytes. Most often, melanomas arise in the skin (cutaneous melanomas) and include the following histologic subtypes: superficial spreading melanoma, nodular melanoma, acral lentiginous melanoma, and lentigo maligna melanoma. Cutaneous melanomas may arise from acquired or congenital melanocytic or dysplastic nevi. Melanomas may also arise in other anatomic sites including the gastrointestinal system, eye, urinary tract, and reproductive system. Melanomas frequently metastasize to lymph nodes, liver, lungs, and brain.[accessedResource: NCIt:C3224][accessDate: 10-05-2010]
DOID:1909
GeneRIF:14585195
GeneRIF:15999103
GeneRIF:12530093
GeneRIF:11812790
GeneRIF:11996105
GeneRIF:14602237
GeneRIF:12107107
GeneRIF:12296515
GeneRIF:12170178
GeneRIF:15760339
GeneRIF:15955106
GeneRIF:12920225
GeneRIF:12777984
GeneRIF:15166498
SNOMEDCT:269503007
GeneRIF:14676121
GeneRIF:15907783
GeneRIF:12747754
GeneRIF:15649154
GeneRIF:15509546
GeneRIF:15618925
GeneRIF:15024079
GeneRIF:15009113
GeneRIF:14704859
GeneRIF:14962105
GeneRIF:15577313
Malignant melanoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:2092003][accessDate: 10-05-2010]
GeneRIF:12949795
GeneRIF:12650606
GeneRIF:12086670
GeneRIF:15557758
GeneRIF:16033529
GeneRIF:12405287
GeneRIF:12793438
GeneRIF:15880581
GeneRIF:12366697
GeneRIF:15743795
GeneRIF:14999777
Malignant melanoma, no ICD-O subtype
GeneRIF:15179190
GeneRIF:15133491
GeneRIF:15610524
A malignant neoplasm derived from cells that are capable of forming melanin, which may occur in the skin of any part of the body, in the eye, or, rarely, in the mucous membranes of the genitalia, anus, oral cavity, or other sites. It occurs mostly in adults and may originate de novo or from a pigmented nevus or malignant lentigo. Melanomas frequently metastasize widely, and the regional lymph nodes, liver, lungs, and brain are likely to be involved. The incidence of malignant skin melanomas is rising rapidly in all parts of the world. (Stedman, 25th ed; from Rook et al., Textbook of Dermatology, 4th ed, p2445)[accessedResource: MSH:D008545][accessDate: 10-05-2010]
GeneRIF:12729801
GeneRIF:15305153
GeneRIF:14632199
GeneRIF:15634901
GeneRIF:11500806
GeneRIF:11959101
GeneRIF:12950721
GeneRIF:15979576
GeneRIF:15983061
GeneRIF:12958194
A malignant, usually aggressive tumor composed of atypical, neoplastic melanocytes. Most often, melanomas arise in the skin (cutaneous melanomas) and include the following histologic subtypes: superficial spreading melanoma, nodular melanoma, acral lentiginous melanoma, and lentigo maligna melanoma. Cutaneous melanomas may arise from acquired or congenital melanocytic or dysplastic nevi. Melanomas may also arise in other anatomic sites including the gastrointestinal system, eye, urinary tract, and reproductive system. Melanomas frequently metastasize to lymph nodes, liver, lungs, and brain.
GeneRIF:12538723
GeneRIF:15897908
GeneRIF:16234564
GeneRIF:15330192
GeneRIF:12824159
GeneRIF:14696968
GeneRIF:12684636
GeneRIF:15009718
GeneRIF:15991050
GeneRIF:15221796
GeneRIF:12170183
GeneRIF:11781826
GeneRIF:12650602
GeneRIF:15299072
GeneRIF:12115481
GeneRIF:12579526
GeneRIF:14744083
GeneRIF:15475451
GeneRIF:15492257
GeneRIF:15009714
A bipyridine that has formula C10H8N2.
alpha,alpha'-bipyridine
alpha,alpha'-dipyridine
Ele Holloway
2-(2-pyridyl)pyridine
c1ccc(nc1)-c1ccccn1
alpha,alpha'-bipyridyl
2,2'-bipyridine
2,2'-dipyridine
2,2'-bipyridyl
InChI=1/C10H8N2/c1-3-7-11-9(5-1)10-6-2-4-8-12-10/h1-8H
http://www.ebi.ac.uk/efo/EFO_0002723
C10H8N2
alpha,alpha'-dipyridyl
2,2'-dipyridyl
bpy
CHEBI:30351
Tomasz Adamusiak
2,2'-Bipyridin
InChIKey=ROFVEXUMMXZLPA-UHFFFAOYAP
TIVE is a human cell line.
TIVE
James Malone
Ele Holloway
MO_726
injury design
Tomasz Adamusiak
CC531
James Malone
ZFS:0000021
gastrula 90%-epiboly
James Malone
phenotype is synonymous with quality
true
obsolete_phenotypic factor
ArrayExpress production team
metabolimic profiling
An assay in which one or more metabolites are analysed.
metabolomic profiling
James Malone
InChIKey=JLRGJRBPOGGCBT-KGCNKATMCC
http://www.ebi.ac.uk/efo/EFO_0001626
C12H18N2O3S
CCCCNC(=O)NS(=O)(=O)c1ccc(C)cc1
tolbutamide
CHEBI:27999
N-Butyl-N'-(4-methylphenylsulfonyl)urea
1-Butyl-3-(p-tolylsulfonyl)urea
N-Butyl-N'-(p-tolylsulfonyl)urea
N-[(butylamino)carbonyl]-4-methylbenzenesulfonamide
InChI=1/C12H18N2O3S/c1-3-4-9-13-12(15)14-18(16,17)11-7-5-10(2)6-8-11/h5-8H,3-4,9H2,1-2H3,(H2,13,14,15)/f/h13-14H
1-Butyl-3-tosylurea
An urea that has formula C12H18N2O3S.
N-n-Butyl-N'-tosylurea
N-(4-Methylphenylsulfonyl)-N'-butylurea
Orinase (TN)
1-Butyl-3-(p-methylphenylsulfonyl)urea
house mouse
http://www.ebi.ac.uk/efo/EFO_0001993
Mus musculus
James Malone
MO_527
genotype design
Tomasz Adamusiak
An instrument design which describes the design of the array.
array design
James Malone
GM18507
Natural Language Generator 8th April 2010
James Malone
A GM18507 is a cell line.
A GM18507 is all of the following: something that has as quality a male, something that derives from a Homo sapiens, and something that derives from a lymphoblast.
639V
James Malone
Ele Holloway
The part of the axis of a plant embryo or seedling below the cotyledon.[accessedResource: BTO:0000613][accessDate: 10-05-2010]
James Malone
GRO:0005342[accessedResource: BTO:0000613][accessDate: 10-05-2010]
GRO:0005342
PO:0020100
BTO:0000613
The part of the axis of a plant embryo or seedling below the cotyledon.
hypocotyl
HMEC184
James Malone
Tomasz Adamusiak
The total sum of the genetic information of an organism that is known and relevant to the experiment being performed, including chromosomal, plasmid, viral or other genetic material which has been introduced into the organism either prior to or during the experiment.
Information, making the distinction between the actual physical material (e.g. a cell) and the information about the genetic content (genotype).
NIFSTD:birnlex_2023
James Malone
genotype
Jie Zheng
MO_51
PATO:0001323
An area is a size quality which describes the two dimensional extent of a material entity.
A 2-D extent quality inhering in a bearer by virtue of the bearer's two dimensional extent.
A 2-D extent quality inhering in a bearer by virtue of the bearer's two dimensional extent.[accessedResource: PATO:0001323][accessDate: 10-05-2010]
area
James Malone
FMAID:6670
renal branch of vagus nerve
Tomasz Adamusiak
Jie Zheng
vasodilator agents
vasodilator
http://www.ebi.ac.uk/efo/EFO_0001848
CHEBI:35620
A drug used to cause dilation of the blood vessels.
vasodilator agent
James Malone
SAEL:115
A membranous sac in animals that serves as the receptacle of a liquid or contains gas.[accessedResource: BTO:0000123][accessDate: 10-05-2010]
Organ with organ cavity which is continuous proximally with the right and left ureters and distally with the urethra. Examples: There is only one urinary bladder.[accessedResource: FMAID:15900][accessDate: 10-05-2010]
MA:0000380
James Malone
bladder
Urinary Bladder
Organ with organ cavity which is continuous proximally with the right and left ureters and distally with the urethra. Examples: There is only one urinary bladder.
Urinary System, Bladder
MAT:0000122
EV:0100098
Urinary bladder[accessedResource: FMAID:15900][accessDate: 10-05-2010]
A membranous sac in animals that serves as the receptacle of a liquid or contains gas.
BTO:0000123
The distensible sac-like organ that functions as a reservoir of urine, collecting from the kidneys and eliminating via the urethra.
The distensible sac-like organ that functions as a reservoir of urine, collecting from the kidneys and eliminating via the urethra.[accessedResource: NCIt:C12414][accessDate: 10-05-2010]
XAO:0000154
NCIt:C12414
FMAID:15900
EHDAA:9328
Urinary System, Bladder[accessedResource: NCIt:C12414][accessDate: 10-05-2010]
AAO:0000623
EMAPA:18321
Germplasm:4652085
SALK_049497 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=germplasm&id=4652085
SALK_049497
James Malone
anticolinergicos
acetylcholine receptor antagonist
anticholinergic agents
James Malone
agent anticholinergique
cholinergic antagonist
cholinergic-blocking agents
anticholinergics
anticholinergiques
agente anticolinergico
Anticholinergika
acetylcholine antagonists
CHEBI:48873
agentes anticolinergicos
Anticholinergikum
http://www.ebi.ac.uk/efo/EFO_0001880
Any drug that binds to but does not activate cholinergic receptors, thereby blocking the actions of acetylcholine or cholinergic agonists.
A sensillum with a long, unicellular, setiform outgrowth that is strongly chitinized.[accessedResource: FBbt:00005177][accessDate: 10-05-2010]
MAT:0000152
sensillum chaeticum[accessedResource: FBbt:00005177][accessDate: 10-05-2010]
FBbt:00005177
chaeta
A sensillum with a long, unicellular, setiform outgrowth that is strongly chitinized.
James Malone
sensory bristle
chaeta[accessedResource: FBbt:00005177][accessDate: 10-05-2010]
sensillum chaeticum
GM12004
James Malone
SKNEP1
James Malone
Ele Holloway
InChI=1/Cu
copper atom
Kupfer
http://www.ebi.ac.uk/efo/EFO_0002406
cuivre
29Cu
[Cu]
Ele Holloway
cuprum
A copper group element atom that has formula Cu.
A copper group element that has formula Cu.
James Malone
InChIKey=RYGMFSIKBFXOCR-UHFFFAOYAN
copper
cobre
CHEBI:28694
C15H10O2
CHEBI:18220
isoflavone
InChIKey=GOMNOOKGLZYEJT-UHFFFAOYAO
3-Phenylchromone
3-phenyl-4H-1-benzopyran-4-one
3-phenyl-4H-chromen-4-one
O=c1c(coc2ccccc12)-c1ccccc1
An isoflavone that has formula C15H10O2.
InChI=1/C15H10O2/c16-15-12-8-4-5-9-14(12)17-10-13(15)11-6-2-1-3-7-11/h1-10H
http://www.ebi.ac.uk/efo/EFO_0001558
Isoflavon
CHEBI:50527
arsenic oxide
http://www.ebi.ac.uk/efo/EFO_0002004
arsenic oxides
James Malone
A class of traumatic stress disorders with symptoms that last more than one month. There are various forms of post-traumatic stress disorder, depending on the time of onset and the duration of these stress symptoms. In the acute form, the duration of the symptoms is between 1 to 3 months. In the chronic form, symptoms last more than 3 months. With delayed onset, symptoms develop more than 6 months after the traumatic event (MeSH).
Stress Disorders, Post Traumatic
SNOMEDCT:47505003
Acute Post-Traumatic Stress Disorder[accessedResource: MSH:D013313][accessDate: 10-05-2010]
Stress Disorder, Posttraumatic
CHRONIC POST TRAUMATIC STRESS DIS
ACUTE POST TRAUMATIC STRESS DIS
Acute Post Traumatic Stress Disorder
POSTTRAUMATIC STRESS DISORDERS
CHRONIC POST TRAUMATIC STRESS DIS[accessedResource: MSH:D013313][accessDate: 10-05-2010]
POSTTRAUMATIC STRESS DIS
PTSD - Post-traumatic stress disorder
Chronic Post-Traumatic Stress Disorder
PTSD - Post-traumatic stress disorder[accessedResource: SNOMEDCT:47505003][accessDate: 10-05-2010]
NCIt:C3389
POSTTRAUMATIC STRESS DISORDERS[accessedResource: MSH:D013313][accessDate: 10-05-2010]
A class of traumatic stress disorders with symptoms that last more than one month. There are various forms of post-traumatic stress disorder, depending on the time of onset and the duration of these stress symptoms. In the acute form, the duration of the symptoms is between 1 to 3 months. In the chronic form, symptoms last more than 3 months. With delayed onset, symptoms develop more than 6 months after the traumatic event (MeSH).[accessedResource: NIFSTD:birnlex_12679][accessDate: 10-05-2010]
Posttraumatic Neuroses
Posttraumatic stress disorder (disorder)[accessedResource: DOID:2055][accessDate: 10-05-2010]
traumatic neurosis
A class of traumatic stress disorders with symptoms that last more than one month. There are various forms of post-traumatic stress disorder, depending on the time of onset and the duration of these stress symptoms. In the acute form, the duration of the symptoms is between 1 to 3 months. In the chronic form, symptoms last more than 3 months. With delayed onset, symptoms develop more than 6 months after the traumatic event.[accessedResource: MSH:D013313][accessDate: 10-05-2010]
Post-Traumatic Neurosis[accessedResource: NIFSTD:birnlex_12679][accessDate: 10-05-2010]
Delayed Onset Post Traumatic Stress Disorder[accessedResource: MSH:D013313][accessDate: 10-05-2010]
Posttraumatic stress disorder NOS
Stress Disorder, Posttraumatic[accessedResource: MSH:D013313][accessDate: 10-05-2010]
post-traumatic stress disorder
Posttraumatic stress disorder (disorder)
MSH:D013313
Post-traumatic stress syndrome
PTSD[accessedResource: MSH:D013313][accessDate: 10-05-2010]
Post-traumatic stress syndrome[accessedResource: SNOMEDCT:47505003][accessDate: 10-05-2010]
GeneRIF:12232785
Stress Disorders, Post-Traumatic[accessedResource: MSH:D013313][accessDate: 10-05-2010]
Posttraumatic stress disorder, NOS[accessedResource: SNOMEDCT:47505003][accessDate: 10-05-2010]
POST TRAUMATIC STRESS DIS[accessedResource: MSH:D013313][accessDate: 10-05-2010]
DELAYED ONSET POST TRAUMATIC STRESS DIS[accessedResource: MSH:D013313][accessDate: 10-05-2010]
NIFSTD:birnlex_12679
Chronic Post-Traumatic Stress Disorder[accessedResource: MSH:D013313][accessDate: 10-05-2010]
Tomasz Adamusiak
Posttraumatic Neuroses[accessedResource: MSH:D013313][accessDate: 10-05-2010]
James Malone
ACUTE POST TRAUMATIC STRESS DIS[accessedResource: MSH:D013313][accessDate: 10-05-2010]
POSTTRAUMATIC STRESS DIS[accessedResource: ICD9:309.81][accessDate: 10-05-2010]
PTSD
Traumatic neurosis[accessedResource: SNOMEDCT:47505003][accessDate: 10-05-2010]
DOID:2055
Post-Traumatic Neurosis
DELAYED ONSET POST TRAUMATIC STRESS DIS
ICD9:309.81
Delayed Onset Post Traumatic Stress Disorder
STRESS DIS POST TRAUMATIC
A class of traumatic stress disorders with symptoms that last more than one month. There are various forms of post-traumatic stress disorder, depending on the time of onset and the duration of these stress symptoms. In the acute form, the duration of the symptoms is between 1 to 3 months. In the chronic form, symptoms last more than 3 months. With delayed onset, symptoms develop more than 6 months after the traumatic event.
http://www.arabidopsis.org/servlets/TairObject?id=1005158774&type=germplasm
CS57750 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158774&type=germplasm
CS57750
James Malone
MAT:0000189
BTO:0000206
SAEL:17
A specialized, fibrous connective tissue, forming most of the temporary skeleton of the embryo, providing a model in which most of the bones develop, and constituting an important part of the growth mechanism of the organism. It exists in several types, the most important of which are hyaline cartilage, elastic cartilage, and fibrocartilage. Also used as a general term to designate a mass of such tissue in a particular site in the body.
MA:0000104
EV:0100141
Portion of tissue which is connective tissue composed of collagen and/or elastin fibers and chondrocytes. Cartilage is avascular and provides both skeletal functions and a framework upon which bone is deposited.[accessedResource: TAO:0001501][accessDate: 10-05-2010]
Portion of tissue which is connective tissue composed of collagen and/or elastin fibers and chondrocytes. Cartilage is avascular and provides both skeletal functions and a framework upon which bone is deposited.
TAO:0001501
cartilage
A specialized, fibrous connective tissue, forming most of the temporary skeleton of the embryo, providing a model in which most of the bones develop, and constituting an important part of the growth mechanism of the organism. It exists in several types, the most important of which are hyaline cartilage, elastic cartilage, and fibrocartilage. Also used as a general term to designate a mass of such tissue in a particular site in the body.[accessedResource: BTO:0000206][accessDate: 10-05-2010]
James Malone
XAO:0000170
http://www.arabidopsis.org/servlets/TairObject?id=1005158645&type=germplasm
CS57621 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158645&type=germplasm
CS57621
James Malone
NCI Metathesaurus http://ncimeta.nci.nih.gov/MetaServlet/ResultServlet?cui=C0039082 Date accessed: 30th October 2007
A set of symptoms or conditions that occur together and suggest the presence of a certain disease or an increased chance of developing the disease.
doesnt' fit in the revised disease classification
true
James Malone
2.5
obsolete_syndrome
copper(2+) sulfate
CHEBI:23414
InChIKey=ARUVKPQLZAKDPS-NJTCMIMLCU
InChI=1/Cu.H2O4S/c;1-5(2,3)4/h;(H2,1,2,3,4)/q+2;/p-2/fCu.O4S/qm;-2
copper(II) sulfate
copper sulfate
A metal sulfate compound having copper(2+) as the counterion.
Cupric sulfate
CuSO4
http://www.ebi.ac.uk/efo/EFO_0001513
cupric sulfate anhydrous
CuO4S
[Cu++].[O-]S([O-])(=O)=O
GeneRIF:15070774
GeneRIF:12900510
GeneRIF:15820830
GeneRIF:15340140
GeneRIF:16048634
GeneRIF:15044606
James Malone
GeneRIF:15220464
Inability to reproduce after a specified period of unprotected intercourse. Reproductive sterility is permanent infertility.[accessedResource: MSH:D007246][accessDate: 10-05-2010]
GeneRIF:12606378
GeneRIF:15345679
GeneRIF:12960071
GeneRIF:12877256
GeneRIF:12479028
GeneRIF:15019807
Inability to reproduce after a specified period of unprotected intercourse. Reproductive sterility is permanent infertility.
GeneRIF:11868623
GeneRIF:12811541
GeneRIF:11352070
GeneRIF:14511213
GeneRIF:16295654
GeneRIF:15820792
GeneRIF:12042278
GeneRIF:15890676
GeneRIF:15749517
GeneRIF:15811073
GeneRIF:12591952
GeneRIF:15546993
GeneRIF:15070965
Reproductive Sterility
GeneRIF:12297552
GeneRIF:15659488
MSH:D007246
GeneRIF:11870081
GeneRIF:15954500
infertility
GeneRIF:14667896
GeneRIF:12648179
GeneRIF:12818258
Infertile[accessedResource: DOID:5223][accessDate: 10-05-2010]
GeneRIF:12801998
GeneRIF:12297480
GeneRIF:12692150
Infertile (finding)[accessedResource: DOID:5223][accessDate: 10-05-2010]
GeneRIF:14687743
GeneRIF:15820831
GeneRIF:15208629
GeneRIF:15229204
GeneRIF:11925379
Infertile
GeneRIF:12816981
GeneRIF:12086470
sterile
GeneRIF:12606444
GeneRIF:15474074
Sterility[accessedResource: MSH:D007246][accessDate: 10-05-2010]
GeneRIF:14978268
GeneRIF:15569941
DOID:5223
Sterility, Reproductive[accessedResource: MSH:D007246][accessDate: 10-05-2010]
GeneRIF:15139971
GeneRIF:15166129
Sterility
GeneRIF:15572448
GeneRIF:12149515
Infertile (finding)
GeneRIF:12072412
GeneRIF:16169419
GeneRIF:12773415
GeneRIF:14673081
GM12872
James Malone
birnlex_7076
Theiler stage 21
Tomasz Adamusiak
Jie Zheng
James Malone
CCRFCEM
Ele Holloway
Glioblastoma[accessedResource: NCIt:C3058][accessDate: 10-05-2010]
Grade IV Astrocytic Tumor
NIFSTD:birnlex_12620
GeneRIF:11593297
GeneRIF:14654927
GeneRIF:15493013
Glioblastoma NOS (morphologic abnormality)
GeneRIF:15867231
Glioblastoma, NOS
GeneRIF:14676120
Malignant Optic Nerve Astrocytoma
Grade IV Astrocytic Tumor[accessedResource: NCIt:C3058][accessDate: 10-05-2010]
GeneRIF:12704666
GeneRIF:15094455
Glioblastoma, Giant Cell
SNOMEDCT:63634009
GeneRIF:12125737
Malignant Optic Nerve Astrocytoma[accessedResource: NIFSTD:birnlex_12621][accessDate: 10-05-2010]
GeneRIF:15986444
GeneRIF:14730346
GBM (Glioblastoma)[accessedResource: NCIt:C3058][accessDate: 10-05-2010]
GeneRIF:14712484
GeneRIF:15509542
Giant Cell Glioblastoma[accessedResource: MSH:D005909][accessDate: 10-05-2010]
GeneRIF:16078115
GeneRIF:15893739
[M]Glioblastoma NOS[accessedResource: SNOMEDCT:269506004][accessDate: 10-05-2010]
GeneRIF:15827123
GeneRIF:16150119
Grade IV Astrocytic Neoplasm
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures.[accessedResource: MSH:D005909][accessDate: 10-05-2010]
spongioblastoma multiforme[accessedResource: DOID:3068][accessDate: 10-05-2010]
GeneRIF:15332332
Glioblastoma (morphologic abnormality)
SNOMEDCT:269506004
GeneRIF:16171786
GeneRIF:12543796
GeneRIF:15364411
GeneRIF:16264179
Grade IV Astrocytic Neoplasm[accessedResource: NCIt:C3058][accessDate: 10-05-2010]
GeneRIF:15967113
[M]Glioblastoma NOS (morphologic abnormality)
GeneRIF:12483523
Glioblastoma (morphologic abnormality)[accessedResource: SNOMEDCT:63634009][accessDate: 10-05-2010]
GeneRIF:11980654
GeneRIF:12507886
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures (MeSH).
GeneRIF:14686729
Spongioblastoma multiforme
GeneRIF:15041700
Glioblastomas
GeneRIF:15967096
Glioblastomas, Giant Cell[accessedResource: MSH:D005909][accessDate: 10-05-2010]
glioblastoma multiforme
Glioblastoma NOS (morphologic abnormality)[accessedResource: DOID:3068][accessDate: 10-05-2010]
GeneRIF:15332324
GeneRIF:15696971
GeneRIF:14753494
Glioblastoma
[M]Glioblastoma NOS
DOID:3068
Glioblastomas, Giant Cell
GBM - Glioblastoma multiforme[accessedResource: SNOMEDCT:63634009][accessDate: 10-05-2010]
GeneRIF:15618223
GeneRIF:12783249
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures (MeSH).[accessedResource: NIFSTD:birnlex_12620][accessDate: 10-05-2010]
GeneRIF:12845671
Glioblastoma, NOS[accessedResource: SNOMEDCT:63634009][accessDate: 10-05-2010]
The most malignant astrocytic tumor (WHO grade IV). It is composed of poorly differentiated neoplastic astrocytes and it is characterized by the presence of cellular polymorphism, nuclear atypia, brisk mitotic activity, vascular thrombosis, microvascular proliferation and necrosis. It typically affects adults and is preferentially located in the cerebral hemispheres. It may develop from diffuse astrocytoma WHO grade II or anaplastic astrocytoma (secondary glioblastoma), but more frequently, it manifests after a short clinical history de novo, without evidence of a less malignant precursor lesion (primary glioblastoma). Two histologic variants are recognized: giant cell glioblastoma and gliosarcoma. (WHO)[accessedResource: NCIt:C3058][accessDate: 10-05-2010]
GeneRIF:15119015
GBM - Glioblastoma multiforme
GeneRIF:15928303
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures.
[M]Glioblastoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:269506004][accessDate: 10-05-2010]
Grade IV Astrocytomas
GeneRIF:11741977
GeneRIF:15029197
GeneRIF:15627206
Glial cell derived tumors arising from the optic nerve, usually presenting in childhood. Roughly 50% are associated with NEUROFIBROMATOSIS 1. Clinical manifestations include decreased visual acuity; EXOPHTHALMOS; NYSTAGMUS, PATHOLOGIC; STRABISMUS; pallor or swelling of the optic disc; and INTRACRANIAL HYPERTENSION. The tumor may extend into the optic chiasm and hypothalamus (MeSH).
GeneRIF:12169389
GeneRIF:12918061
GeneRIF:12084347
GeneRIF:11953893
Glioblastomas[accessedResource: MSH:D005909][accessDate: 10-05-2010]
GeneRIF:15153340
GLM - Glioblastoma multiforme
GeneRIF:15339919
GeneRIF:15719270
GeneRIF:14701753
Optic Glioma[accessedResource: NIFSTD:birnlex_12621][accessDate: 10-05-2010]
GeneRIF:11916499
Grade IV Astrocytomas[accessedResource: MSH:D005909][accessDate: 10-05-2010]
James Malone
GeneRIF:15561105
GeneRIF:12407114
GeneRIF:12133571
GeneRIF:15908427
GeneRIF:15122332
GeneRIF:16051185
GeneRIF:12517803
NIFSTD:birnlex_12621
GeneRIF:14692702
GBM (Glioblastoma)
Optic Glioma
GeneRIF:16251422
NCIt:C3058
GeneRIF:16051596
GeneRIF:14519668
GeneRIF:11856869
GeneRIF:15557280
Glial cell derived tumors arising from the optic nerve, usually presenting in childhood. Roughly 50% are associated with NEUROFIBROMATOSIS 1. Clinical manifestations include decreased visual acuity; EXOPHTHALMOS; NYSTAGMUS, PATHOLOGIC; STRABISMUS; pallor or swelling of the optic disc; and INTRACRANIAL HYPERTENSION. The tumor may extend into the optic chiasm and hypothalamus (MeSH).[accessedResource: NIFSTD:birnlex_12621][accessDate: 10-05-2010]
GeneRIF:16003758
GeneRIF:12082608
Tomasz Adamusiak
GeneRIF:11875718
MSH:D005909
GeneRIF:12850541
Astrocytoma, Grade IV
GeneRIF:15605984
GeneRIF:11809760
GeneRIF:12839970
GeneRIF:12414663
GeneRIF:12073047
The most malignant astrocytic tumor (WHO grade IV). It is composed of poorly differentiated neoplastic astrocytes and it is characterized by the presence of cellular polymorphism, nuclear atypia, brisk mitotic activity, vascular thrombosis, microvascular proliferation and necrosis. It typically affects adults and is preferentially located in the cerebral hemispheres. It may develop from diffuse astrocytoma WHO grade II or anaplastic astrocytoma (secondary glioblastoma), but more frequently, it manifests after a short clinical history de novo, without evidence of a less malignant precursor lesion (primary glioblastoma). Two histologic variants are recognized: giant cell glioblastoma and gliosarcoma. (WHO)
GeneRIF:15198128
GeneRIF:16215635
GeneRIF:14555979
GLM - Glioblastoma multiforme[accessedResource: SNOMEDCT:63634009][accessDate: 10-05-2010]
GeneRIF:12445161
GeneRIF:15975137
Optic Nerve Glioma[accessedResource: NIFSTD:birnlex_12621][accessDate: 10-05-2010]
Astrocytoma, Grade IV[accessedResource: MSH:D005909][accessDate: 10-05-2010]
GeneRIF:15906353
Optic Nerve Glioma
GeneRIF:11959893
BTO:0000470
A bud that will develop into a flower.
A bud that will develop into a flower.[accessedResource: BTO:0000470][accessDate: 10-05-2010]
flower bud
James Malone
true
An MMHCC (Mouse Models of Human Cancers Consortium) part is an organism part that has been modelled by the MMHCC, a program to develop and refine experimental models that reflect the etiology and progression of human cancer.
NCIt:C19750
obsolete_MMHCC part
MMHCC[accessedResource: NCIt:C19750][accessDate: 10-05-2010]
Mouse Models of Human Cancer Consortium[accessedResource: NCIt:C19750][accessDate: 10-05-2010]
A program to develop and refine experimental models that reflect the etiology and progression of human cancer.[accessedResource: NCIt:C19750][accessDate: 10-05-2010]
Obsolete: No longer required in EFO
Mouse Models of Human Cancer Consortium
James Malone
A program to develop and refine experimental models that reflect the etiology and progression of human cancer.
MMHCC
GeneRIF:15856430
GeneRIF:11859072
GeneRIF:12552965
GeneRIF:12784332
GeneRIF:14584041
carcinoma of breast NOS (disorder)[accessedResource: DOID:3459][accessDate: 10-05-2010]
GeneRIF:12538354
CANCER, BREAST[accessedResource: NCIt:C4872][accessDate: 10-05-2010]
GeneRIF:15550849
GeneRIF:12522268
GeneRIF:15693887
GeneRIF:12105188
Carcinoma of breast NOS (disorder)
Mammary Carcinoma
GeneRIF:10713110
A carcinoma that originates from breast tissue.
GeneRIF:11992405
GeneRIF:11802810
DOID:3459
Carcinoma of breast NOS
GeneRIF:12015771
Cancer of the Breast[accessedResource: NCIt:C4872][accessDate: 10-05-2010]
GeneRIF:16007173
Carcinoma of breast (disorder)
GeneRIF:15592496
Carcinoma of the Breast[accessedResource: NCIt:C4872][accessDate: 10-05-2010]
GeneRIF:11839578
GeneRIF:15856473
GeneRIF:12592371
GeneRIF:14966279
GeneRIF:15059886
GeneRIF:16273187
GeneRIF:12174926
GeneRIF:11909957
SNOMEDCT:254838004
Cancer of Breast[accessedResource: NCIt:C4872][accessDate: 10-05-2010]
GeneRIF:11986781
GeneRIF:15374639
GeneRIF:15999367
GeneRIF:15944917
GeneRIF:12637343
GeneRIF:15067342
GeneRIF:12566312
GeneRIF:15034868
GeneRIF:11724803
GeneRIF:15034014
GeneRIF:15578430
GeneRIF:15743035
GeneRIF:14729059
GeneRIF:11994274
breast carcinoma
GeneRIF:15156151
GeneRIF:15882617
GeneRIF:12034875
GeneRIF:15073116
GeneRIF:16295419
GeneRIF:15867228
GeneRIF:15168344
GeneRIF:14654792
GeneRIF:16024059
GeneRIF:15920544
GeneRIF:14519635
Carcinoma of breast NOS[accessedResource: SNOMEDCT:286898006][accessDate: 10-05-2010]
A carcinoma arising from the breast, most commonly the terminal ductal-lobular unit. It is the most common malignant tumor in females. Risk factors include country of birth, family history, menstrual and reproductive history, fibrocystic disease and epithelial hyperplasia, exogenous estrogens, contraceptive agents, and ionizing radiation. The vast majority of breast carcinomas are adenocarcinomas (ductal or lobular). Breast carcinoma spreads by direct invasion, by the lymphatic route, and by the blood vessel route. The most common site of lymph node involvement is the axilla.
GeneRIF:16049961
GeneRIF:15837735
GeneRIF:11962738
Mammary Carcinoma[accessedResource: NCIt:C4872][accessDate: 10-05-2010]
GeneRIF:15742334
GeneRIF:16000313
CA - Carcinoma of breast[accessedResource: SNOMEDCT:254838004][accessDate: 10-05-2010]
GeneRIF:15059510
GeneRIF:12490973
GeneRIF:14638862
NCIt:C4872
GeneRIF:14666627
GeneRIF:16054892
GeneRIF:12231533
carcinoma of breast (disorder)[accessedResource: DOID:3459][accessDate: 10-05-2010]
A carcinoma that originates from breast tissue.[accessedResource: DOID:3459][accessDate: 10-05-2010]
Cancer of Breast
GeneRIF:14871985
GeneRIF:12581744
GeneRIF:12653579
Cancer of the Breast
GeneRIF:15149158
GeneRIF:15241822
GeneRIF:14612940
GeneRIF:15102684
GeneRIF:15863392
GeneRIF:14692019
A carcinoma arising from the breast, most commonly the terminal ductal-lobular unit. It is the most common malignant tumor in females. Risk factors include country of birth, family history, menstrual and reproductive history, fibrocystic disease and epithelial hyperplasia, exogenous estrogens, contraceptive agents, and ionizing radiation. The vast majority of breast carcinomas are adenocarcinomas (ductal or lobular). Breast carcinoma spreads by direct invasion, by the lymphatic route, and by the blood vessel route. The most common site of lymph node involvement is the axilla.[accessedResource: NCIt:C4872][accessDate: 10-05-2010]
GeneRIF:14687724
GeneRIF:15353581
GeneRIF:12650602
GeneRIF:11891846
GeneRIF:15102687
Carcinoma of Breast
GeneRIF:15451571
GeneRIF:12037665
James Malone
GeneRIF:11759817
GeneRIF:15492258
GeneRIF:15193258
GeneRIF:12499259
GeneRIF:12648519
GeneRIF:12879463
GeneRIF:12529969
GeneRIF:11822878
SNOMEDCT:286898006
GeneRIF:14500350
GeneRIF:12496062
GeneRIF:16027728
CANCER, BREAST
GeneRIF:15935701
GeneRIF:12878859
GeneRIF:12640109
GeneRIF:12115372
GeneRIF:12462387
carcinoma OF breast[accessedResource: DOID:3459][accessDate: 10-05-2010]
GeneRIF:15671541
GeneRIF:12133473
CA - Carcinoma of breast
GeneRIF:16144914
GeneRIF:12197229
GeneRIF:12452027
Carcinoma of the Breast
GeneRIF:11948115
GeneRIF:14991534
GeneRIF:15241820
carbamohydroxamic acid
carbamoyl oxime
NC(=O)NO
carbamyl hydroxamate
CHEBI:44423
InChIKey=VSNHCAURESNICA-DTXNPOPMCG
N-HYDROXYUREA
carbamohydroximic acid
Hydroxyharnstoff
InChI=1/CH4N2O2/c2-1(4)3-5/h5H,(H3,2,3,4)/f/h3H,2H2
http://www.ebi.ac.uk/efo/EFO_0001554
oxyurea
CH4N2O2
N-carbamoylhydroxylamine
An urea that has formula CH4N2O2.
Hydroxycarbamid
Hydroxycarbamide
hydrea
hydroxyurea
true
UO:0000007
http://www.ebi.ac.uk/efo/EFO_0001684
A luminous intensity unit is a base unit which is a standard measure of the wavelength-weighted power emitted by a light source in a particular direction.
A base unit which is a standard measure of the wavelength-weighted power emitted by a light source in a particular direction.
luminous intensity unit
James Malone
MAT:0000156
BTO:0000447
Any of the light horny epidermal outgrowths that form the external covering of the body of birds and that consist of a shaft bearing on each side a series of barbs which bear barbules which in turn bear barbicels commonly ending in hooked hamuli and interlocking with the barbules of an adjacent barb to link the barbs into a continuous vane.
Any of the light horny epidermal outgrowths that form the external covering of the body of birds and that consist of a shaft bearing on each side a series of barbs which bear barbules which in turn bear barbicels commonly ending in hooked hamuli and interlocking with the barbules of an adjacent barb to link the barbs into a continuous vane.[accessedResource: BTO:0000447][accessDate: 10-05-2010]
feather
James Malone
A microscopy assay is an assay that provides images of molecules at various resolution depending on the technology used.
microscopy assay
James Malone
Flora Logan
Helen Parkinson
MO_10
Helen Parkinson
Tomasz Adamusiak
Tomasz Adamusiak
Concept naming convention is lower case natural naming with spaces, when necessary captials should be used, for example disease factor, HIV, breast carcinoma, Ewing's sarcoma
Jie Zheng
An experimental factor in Array Express.
James Malone
An experimental factor in Array Express which are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner.
James Malone
true
experimental factor
James Malone
Ele Holloway
CN1CCCC1c1cccnc1
CHEBI:18723
Nikotin
A pyrrolidine alkaloid that has formula C10H14N2.
InChIKey=SNICXCGAKADSCV-UHFFFAOYAX
nicotine
InChI=1/C10H14N2/c1-12-7-3-5-10(12)9-4-2-6-11-8-9/h2,4,6,8,10H,3,5,7H2,1H3
C10H14N2
(R,S)-nicotine
3-(1-methylpyrrolidin-2-yl)pyridine
http://www.ebi.ac.uk/efo/EFO_0002415
Nicotin
COLO357
James Malone
Ele Holloway
FBbt:00004905
CL:0000579
border cell
border cell[accessedResource: FBbt:00004905][accessDate: 10-05-2010]
border follicle cell
Tomasz Adamusiak
James Malone
plant ovary
MAT:0000517
PO:0009072
The enlarged rounded usually basal portion of the pistil or gynoecium of an angiospermous plant that bears the ovules and consists of one or more carpels[accessedResource: BTO:0000750][accessDate: 10-05-2010]
The enlarged rounded usually basal portion of the pistil or gynoecium of an angiospermous plant that bears the ovules and consists of one or more carpels
BTO:0000750
2.5
true
obsolete_liver carcinoma
James Malone
duplicate of EFO_0000182
Any cell line that is derived from the prostate.
prostate derived cell line
James Malone
A highly vascular ductless organ that is located in the left abdominal region near the stomach or intestine of most vertebrates and is concerned with final destruction of red blood cells, filtration and storage of blood, and production of lymphocytes.[accessedResource: BTO:0001281][accessDate: 10-05-2010]
FMAID:7196
EV:0100055
SAEL:101
BTO:0001281
James Malone
MFO:0003100
spleen
ZFA:0000436
MA:0000141
XAO:0000328
TAO:0000436
MAT:0000085
EMAPA:18767
A highly vascular ductless organ that is located in the left abdominal region near the stomach or intestine of most vertebrates and is concerned with final destruction of red blood cells, filtration and storage of blood, and production of lymphocytes.
true
obsolete_Beas2B
James Malone
Duplication, use EFO_0001089 instead
James Malone
http://www.ebi.ac.uk/efo/EFO_0001710
unified atomic mass unit
u
true
An independently to the base SI units defined mass unit which is equal to one twelfth of the mass of an unbound atom of the carbon-12 nuclide, at rest and in its ground state.
Da
UO:0000221
dalton
A dalton is a mass unit is an independent unit to the base SI units and is equal to one twelfth of the mass of an unbound atom of the carbon-12 nuclide, at rest and in its ground state.
Antimanic drugs are agents used to treat bipolar disorders or mania associated with other affective disorders.
CHEBI:35477
antimanics
antimanic agent
James Malone
antimanic drugs
antimanic drug
http://www.ebi.ac.uk/efo/EFO_0001840
1.9
true
obsolete_lymphoblastic leukemia MOLT-4
James Malone
duplicate of EFO_0001220
birn_anat:birnlex_1197
MA:0000950
hippocampus CA1
Tomasz Adamusiak
FMAID:9462
The middle and thickest layer of the heart wall, composed of cardiac muscle.
Heart muscle
XAO:0000065
ZFA:0001319
cardiac muscle
The principal muscle tissue of the vertebrate heart made up of striated fibers that appear to be separated from each other under the electron microscope but that function in long-term rhythmic contraction as if in protoplasmic continuity.
BTO:0000199
BTO:0000901
TAO:0001319
EMAPA:16208
EV:0100022
Muscle of heart
Muscle of heart[accessedResource: FMAID:9462][accessDate: 10-05-2010]
The principal muscle tissue of the vertebrate heart made up of striated fibers that appear to be separated from each other under the electron microscope but that function in long-term rhythmic contraction as if in protoplasmic continuity.[accessedResource: BTO:0000199][accessDate: 10-05-2010]
MA:0000080
Muscle layer of organ which has as its parts the myocardium proper and the conducting system of the heart.[accessedResource: FMAID:9462][accessDate: 10-05-2010]
Muscle layer of organ which has as its parts the myocardium proper and the conducting system of the heart.
The middle and thickest layer of the heart wall, composed of cardiac muscle.[accessedResource: BTO:0000901][accessDate: 10-05-2010]
James Malone
cardiac muscle[accessedResource: ZFA:0001319][accessDate: 10-05-2010]
heart muscle[accessedResource: BTO:0000199][accessDate: 10-05-2010]
MAT:0000453
myocardium
http://www.arabidopsis.org/servlets/TairObject?id=1005158650&type=germplasm
CS57626 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158650&type=germplasm
CS57626
James Malone
MO_764
cell type comparison design
Tomasz Adamusiak
carcinoma in situ of breast
DOID:8791
ductal carcinoma in situ
James Malone
drug role
James Malone
EPILEP NOS W/O INTR EPIL[accessedResource: ICD9:345.90][accessDate: 10-05-2010]
GeneRIF:15006707
Epilepsy (disorder)
SNOMEDCT:313307000
Epileptic convulsions, NOS
Epileptic convulsions, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 10-05-2010]
Epilectic attack, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 10-05-2010]
GeneRIF:12217514
GeneRIF:12000122
Seizure disorder (disorder)[accessedResource: SNOMEDCT:128613002][accessDate: 10-05-2010]
GeneRIF:15505174
GeneRIF:12270687
Epileptic seizures
Epilepsy, unspecified, without mention of intractable epilepsy
GeneRIF:12958597
SNOMEDCT:267593008
Epilepsy, unspecified, with intractable epilepsy[accessedResource: ICD9:345.91][accessDate: 10-05-2010]
Epileptic seizure
SNOMEDCT:193020001
ICD9:345.81
Epileptic fit
Epileptic convulsions
Epileptic attack
Other forms of epilepsy (disorder)
Epilectic attack, NOS
GeneRIF:12773553
GeneRIF:12746865
DOID:1826
GeneRIF:14597704
GeneRIF:15790563
[X]Other epilepsy (disorder)
[X]Other epilepsy[accessedResource: SNOMEDCT:194491006][accessDate: 10-05-2010]
Epileptic seizures, NOS
Epilepsy NOS (disorder)
Other forms of epilepsy NOS (disorder)
GeneRIF:12875997
GeneRIF:15115830
GeneRIF:12648752
Generalised seizure[accessedResource: SNOMEDCT:246545002][accessDate: 10-05-2010]
GeneRIF:15637270
GeneRIF:15342642
GeneRIF:12185771
Other forms of epilepsy NOS (disorder)[accessedResource: SNOMEDCT:193025006][accessDate: 10-05-2010]
GeneRIF:16129091
Epilepsy NOS
Epilepsy (disorder)[accessedResource: SNOMEDCT:84757009][accessDate: 10-05-2010]
ICD9:345.8
SNOMEDCT:84757009
SNOMEDCT:193025006
Other forms of epilepsy, without mention of intractable epilepsy
Epilepsy, unspecified, with intractable epilepsy
Epileptic fit[accessedResource: SNOMEDCT:246545002][accessDate: 10-05-2010]
GeneRIF:15461680
Generalized convulsion[accessedResource: SNOMEDCT:246545002][accessDate: 10-05-2010]
A disorder characterized by recurrent episodes of paroxysmal brain dysfunction due to a sudden, disorderly, and excessive neuronal discharge. Epilepsy classification systems are generally based upon: (1) clinical features of the seizure episodes (e.g., motor seizure), (2) etiology (e.g., post-traumatic), (3) anatomic site of seizure origin (e.g., frontal lobe seizure), (4) tendency to spread to other structures in the brain, and (5) temporal patterns (e.g., nocturnal epilepsy) (MeSH).
Generalized fit[accessedResource: SNOMEDCT:246545002][accessDate: 10-05-2010]
GeneRIF:12601092
ICD9:345
Epileptic seizures[accessedResource: SNOMEDCT:84757009][accessDate: 10-05-2010]
EPILEP NEC W/O INTR EPIL[accessedResource: ICD9:345.80][accessDate: 10-05-2010]
Epileptic attack, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 10-05-2010]
EF - Epileptic fit
GeneRIF:15215304
EP - Epilepsy
[X]Other epilepsy (disorder)[accessedResource: SNOMEDCT:194491006][accessDate: 10-05-2010]
GeneRIF:15979590
Epileptic disorder, NOS
EP - Epilepsy[accessedResource: SNOMEDCT:84757009][accessDate: 10-05-2010]
GeneRIF:15288497
GeneRIF:12702713
Generalized seizure
Generalized seizure (finding)[accessedResource: SNOMEDCT:246545002][accessDate: 10-05-2010]
Generalized seizure[accessedResource: SNOMEDCT:246545002][accessDate: 10-05-2010]
Generalised convulsion[accessedResource: SNOMEDCT:246545002][accessDate: 10-05-2010]
EPILEPSY NOS W INTR EPIL
Other forms of epilepsy, without mention of intractable epilepsy[accessedResource: ICD9:345.80][accessDate: 10-05-2010]
Epilepsy NOS (disorder)[accessedResource: SNOMEDCT:267593008][accessDate: 10-05-2010]
ICD9:345.80
GeneRIF:12086636
Epileptic seizure (finding)
GeneRIF:12205640
NCIt:C3020
Epileptic seizures, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 10-05-2010]
Epileptic disorder
Generalized fit
Epileptic seizure (finding)[accessedResource: SNOMEDCT:313307000][accessDate: 10-05-2010]
Epileptic disorder, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 10-05-2010]
GeneRIF:15120744
Epileptic fits[accessedResource: SNOMEDCT:84757009][accessDate: 10-05-2010]
GeneRIF:15937479
EF - Epileptic fit[accessedResource: SNOMEDCT:246545002][accessDate: 10-05-2010]
Epileptic fits
GeneRIF:12482897
GeneRIF:15254012
EPILEPSY NEC W INTR EPIL[accessedResource: ICD9:345.81][accessDate: 10-05-2010]
GeneRIF:16049933
James Malone
GeneRIF:14660671
GeneRIF:15970629
EPILEPSY NEC W INTR EPIL
Generalized seizure (finding)
GeneRIF:14985377
NIFSTD:birnlex_12718
GeneRIF:15159136
Seizure disorder[accessedResource: SNOMEDCT:128613002][accessDate: 10-05-2010]
GeneRIF:15009222
epilepsy
Generalized convulsion
GeneRIF:15665077
GeneRIF:16091474
GeneRIF:15567475
Seizure disorder (disorder)
GeneRIF:12686700
Epileptic disorder[accessedResource: SNOMEDCT:84757009][accessDate: 10-05-2010]
GeneRIF:12115687
GeneRIF:12435565
GeneRIF:12095917
Epileptic fits, NOS
Epileptic seizure[accessedResource: SNOMEDCT:313307000][accessDate: 10-05-2010]
Seizure disorder
ICD9:345.91
A brain disorder characterized by episodes of abnormally increased neuronal discharge resulting in transient episodes of sensory or motor neurological dysfunction, or psychic dysfunction. These episodes may or may not be associated with loss of consciousness or convulsions.[accessedResource: NCIt:C3020][accessDate: 10-05-2010]
GeneRIF:15492925
GeneRIF:15483119
Generalised seizure
Generalised convulsion
GeneRIF:14984901
A brain disorder characterized by episodes of abnormally increased neuronal discharge resulting in transient episodes of sensory or motor neurological dysfunction, or psychic dysfunction. These episodes may or may not be associated with loss of consciousness or convulsions.
GeneRIF:15304595
Epileptic[accessedResource: SNOMEDCT:84757009][accessDate: 10-05-2010]
Generalised fit[accessedResource: SNOMEDCT:246545002][accessDate: 10-05-2010]
GeneRIF:11889467
GeneRIF:15452324
Other forms of epilepsy NOS[accessedResource: SNOMEDCT:193025006][accessDate: 10-05-2010]
GeneRIF:15452306
EPILEP NOS W/O INTR EPIL
Epileptic attack[accessedResource: SNOMEDCT:84757009][accessDate: 10-05-2010]
GeneRIF:15160397
ICD9:345.9
Epileptic
Epilepsy, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 10-05-2010]
GeneRIF:15505175
Other forms of epilepsy[accessedResource: SNOMEDCT:193020001][accessDate: 10-05-2010]
EPILEP NEC W/O INTR EPIL
SNOMEDCT:128613002
Epilepsy, unspecified, without mention of intractable epilepsy[accessedResource: ICD9:345.90][accessDate: 10-05-2010]
GeneRIF:15026125
GeneRIF:12960023
Epileptic attack, NOS
Other forms of epilepsy, with intractable epilepsy[accessedResource: ICD9:345.81][accessDate: 10-05-2010]
Other forms of epilepsy (disorder)[accessedResource: SNOMEDCT:193020001][accessDate: 10-05-2010]
GeneRIF:12460603
GeneRIF:14646589
Other forms of epilepsy
ICD9:345.90
GeneRIF:15282290
Epileptic fits, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 10-05-2010]
Tomasz Adamusiak
EPILEPSY NOS W INTR EPIL[accessedResource: ICD9:345.91][accessDate: 10-05-2010]
GeneRIF:15772097
GeneRIF:14736855
Epileptic convulsions[accessedResource: SNOMEDCT:84757009][accessDate: 10-05-2010]
GeneRIF:16007083
A disorder characterized by recurrent episodes of paroxysmal brain dysfunction due to a sudden, disorderly, and excessive neuronal discharge. Epilepsy classification systems are generally based upon: (1) clinical features of the seizure episodes (e.g., motor seizure), (2) etiology (e.g., post-traumatic), (3) anatomic site of seizure origin (e.g., frontal lobe seizure), (4) tendency to spread to other structures in the brain, and (5) temporal patterns (e.g., nocturnal epilepsy) (MeSH).[accessedResource: NIFSTD:birnlex_12718][accessDate: 10-05-2010]
GeneRIF:15258581
Other forms of epilepsy NOS
SNOMEDCT:246545002
Generalised fit
GeneRIF:16095760
SNOMEDCT:194491006
GeneRIF:12533622
GeneRIF:15571623
[X]Other epilepsy
Other forms of epilepsy, with intractable epilepsy
MAT:0000477
A nasal placode
A tissue modifier is an anatomical modifier which describes some quality about a tissue.
tissue modifier
James Malone
Cecum
intestinum caecum[accessedResource: BTO:0000166][accessDate: 10-05-2010]
EV:0100397
Intestinum crassum caecum
blind intestine
SAEL:15
blindgut[accessedResource: BTO:0000166][accessDate: 10-05-2010]
intestinum caecum
blindgut
blind intestine[accessedResource: BTO:0000166][accessDate: 10-05-2010]
The first part of the large intestine, forming a dilated pouch into which open the ileum, colon, and appendix vermiformis.[accessedResource: BTO:0000166][accessDate: 10-05-2010]
caecum
James Malone
BTO:0000166
FMAID:14541
MAT:0000288
EHDAA:3913
MA:00000334
cecum[accessedResource: BTO:0000166][accessDate: 10-05-2010]
Intestinum crassum caecum[accessedResource: FMAID:14541][accessDate: 10-05-2010]
The first part of the large intestine, forming a dilated pouch into which open the ileum, colon, and appendix vermiformis.
DOID:4905
Carcinoma of pancreas (disorder)
carcinoma of pancreas
pancreatic carcinoma
Ele Holloway
A carcinoma that is manifested in cells found in the tissues of the pancreas.
Exocrine pancreas carcinoma
exocrine cancer[accessedResource: DOID:4905][accessDate: 10-05-2010]
Exocrine pancreas carcinoma[accessedResource: DOID:4905][accessDate: 10-05-2010]
carcinoma of pancreas[accessedResource: DOID:4905][accessDate: 10-05-2010]
Tomasz Adamusiak
A carcinoma that is manifested in cells found in the tissues of the pancreas.[accessedResource: DOID:4905][accessDate: 10-05-2010]
carcinoma of pancreas (disorder)[accessedResource: DOID:4905][accessDate: 10-05-2010]
exocrine cancer
CL:0000646
basal cell
James Malone
NCIH2030
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0002657
hormone
MO_674
A treatment applied to a sample where some behaviour is expected as a result e.g. avoidance
Jie Zheng
avoidance
James Malone
behavioural stimulus
Tomasz Adamusiak
behavioral stimulus
cbdca
A platinum coordination entity that has formula C6H12N2O4Pt.
InChIKey=OLESAACUTLOWQZ-DRGNIJNRCF
C6H12N2O4Pt
C6H6O4Pt.2H3N
cis-diammine(1,1-cyclobutanedicarboxylato)platinum(II)
carboplatin
(SP-4-2)-diammine[cyclobutane-1,1-dicarboxylato(2-)-kappa(2)O,O']platinum
InChI=1/C6H8O4.2H3N.Pt/c7-4(8)6(5(9)10)2-1-3-6;;;/h1-3H2,(H,7,8)(H,9,10);2*1H3;/q;;;+2/p-2/fC6H6O4.2H3N.Pt/q-2;;;m
Paraplatin
[H][N]([H])([H])[Pt]1(OC(=O)C2(CCC2)C(=O)O1)[N]([H])([H])[H]
cis-(1,1-cyclobutanedicarboxylato)diammineplatinum(II)
cis-diammine(1,1-cyclobutanedicarboxylato)platinum
James Malone
Ele Holloway
769P
oligodendroglioma
Tomasz Adamusiak
[M]Oligodendroglioma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189920006][accessDate: 10-05-2010]
GeneRIF:12908752
Mixed Oligodendroglioma-Astrocytomas
Oligodendrogliomas, Childhood[accessedResource: MSH:D009837][accessDate: 10-05-2010]
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms (MeSH).[accessedResource: NIFSTD:birnlex_12627][accessDate: 10-05-2010]
A well-differentiated (WHO grade II), diffusely infiltrating neuroglial tumor of adults, typically located in the cerebral hemispheres. It is composed predominantly of cells which morphologically resemble oligodendroglia. The neoplastic cells have rounded homogeneous nuclei and, on paraffin sections, a swollen, clear cytoplasm ('honeycomb' appearance). It generally recurs locally, with median post-operative survival times ranging from 3 to 5 years for patients with all histological grades. (Adapted from WHO.)
Childhood Oligodendrogliomas
DOID:3181
Mixed Oligodendroglioma-Ependymomas
GeneRIF:12635659
Oligodendroblastoma[accessedResource: NIFSTD:birnlex_12627][accessDate: 10-05-2010]
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms (MeSH).
Oligodendroblastomas
Oligodendroglioma, Childhood[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroglioma (morphologic abnormality)
GeneRIF:15834925
Well Differentiated Oligodendroglial Tumor[accessedResource: NCIt:C3288][accessDate: 10-05-2010]
Anaplastic Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Mixed Oligodendroglioma Astrocytoma
Oligodendroglioma (morphologic abnormality)[accessedResource: SNOMEDCT:73348003][accessDate: 10-05-2010]
GeneRIF:15993274
MSH:D009837
Oligodendroglioma, Anaplastic[accessedResource: MSH:D009837][accessDate: 10-05-2010]
[M]Oligodendroglioma NOS[accessedResource: SNOMEDCT:189920006][accessDate: 10-05-2010]
Oligodendroglioma, NOS
Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
SNOMEDCT:73348003
[M]Oligodendroglioma NOS (morphologic abnormality)
Oligodendroblastomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Anaplastic Oligodendroglioma
Mixed Oligodendroglioma Ependymoma
Oligodendrogliomas, Well-Differentiated[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Well Differentiated Oligodendroglioma[accessedResource: NCIt:C3288][accessDate: 10-05-2010]
Adult Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Adult Oligodendrogliomas
GeneRIF:15950764
Mixed Oligodendroglioma-Astrocytomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
OLIGODENDROGLIOMA WELL DIFFER[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroglioma, NOS[accessedResource: SNOMEDCT:73348003][accessDate: 10-05-2010]
NIFSTD:birnlex_12627
Oligodendroglioma NOS (morphologic abnormality)
Mixed Oligodendroglioma-Ependymomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Well-Differentiated Oligodendrogliomas
GeneRIF:12850541
WHO Grade II Oligodendroglial Neoplasm
WHO Grade II Oligodendroglial Neoplasm[accessedResource: NCIt:C3288][accessDate: 10-05-2010]
Mixed Oligodendroglioma Ependymoma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Childhood Oligodendroglioma
James Malone
Mixed Oligodendroglioma Astrocytoma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
GeneRIF:16103065
WELL DIFFER OLIGODENDROGLIOMA
Adult Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
A well-differentiated (WHO grade II), diffusely infiltrating neuroglial tumor, typically located in the cerebral hemispheres. It is composed predominantly of cells which morphologically resemble oligodendroglia. The neoplastic cells have rounded homogeneous nuclei and, on paraffin sections, a swollen, clear cytoplasm (&apos;honeycomb&apos; appearance). (Adapted from WHO.)
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroglioma, Adult
WHO Grade II Oligodendroglial Tumor[accessedResource: NCIt:C3288][accessDate: 10-05-2010]
Oligodendroglioma, Well Differentiated
GeneRIF:15484698
NCIt:C3288
Oligodendroblastoma
Oligodendroglioma NOS (morphologic abnormality)[accessedResource: DOID:3181][accessDate: 10-05-2010]
Well Differentiated Oligodendroglial Tumor
SNOMEDCT:189920006
WHO Grade II Oligodendroglial Tumor
A well-differentiated (WHO grade II), diffusely infiltrating neuroglial tumor, typically located in the cerebral hemispheres. It is composed predominantly of cells which morphologically resemble oligodendroglia. The neoplastic cells have rounded homogeneous nuclei and, on paraffin sections, a swollen, clear cytoplasm (&apos;honeycomb&apos; appearance). (Adapted from WHO.)[accessedResource: NCIt:C3288][accessDate: 10-05-2010]
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)
[M]Oligodendroglioma NOS
Oligodendrogliomas, Anaplastic
Oligodendrogliomas
FBbt:00005487
anterior spiracle specific anlage
James Malone
ZFS:0000010
blastula 512-cell
James Malone
NIFSTD:birnlex_734
A basal part of the diencephalon that lies beneath the thalamus on each side, forms the floor of the third ventricle, and includes vital autonomic regulatory centers.nThe ventral part of the diencephalon that forms the floor and part of the lateral wall of the third ventricle. Anatomically, it includes the preoptic area, optic tract, optic chiasm, mammillary bodies, tuber cinereum, infundibulum, and neurohypophysis, but for physiological purposes the neurohypophysis is considered a distinct structure. The hypothalamus may be divided into five regions or areas (area hypothalamica rostralis, area hypothalamica dorsalis, area hypothalamica intermedia, area hypothalamica lateralis and area hypothalamica posterior) or into three longitudinal zones (periventricular zone, medial zone, and lateral zone). The hypothalamic nuclei constitute that part of the corticodiencephalic mechanism that activates, controls and integrates the peripheral autonomic mechanisms, endocrine activity, and many somatic functions, e.g., a general regulation of water balance, body temperature, sleep, and food intake, and the development of secondary sex characteristics. The hypothalamus secretes vasopressin and oxytocin, which are stored in the pituitary, as well as many releasing factors (hypophysiotropic hormones), by means of which it exerts control over functions of the adenohypophysis.
CNS - Brain - Hypothalamus (MMHCC)[accessedResource: NCIt:C22616][accessDate: 10-05-2010]
Multi-tissue structure which is the largest portion of diencephalon and is ventrally located. The hypothalamus arises near the end of the segmentation period and the embryonic hypothalamic region gives rise to the neurohypophysis and other diencephalic nuclei.
Preoptico-hypothalamic region[accessedResource: FMAID:62008][accessDate: 10-05-2010]
MAT:0000112
CNS - Brain - Hypothalamus (MMHCC)
hypothalamus
ZFA:0000032
James Malone
BTO:0000614
EV:0100225
A basal part of the diencephalon that lies beneath the thalamus on each side, forms the floor of the third ventricle, and includes vital autonomic regulatory centers.nThe ventral part of the diencephalon that forms the floor and part of the lateral wall of the third ventricle. Anatomically, it includes the preoptic area, optic tract, optic chiasm, mammillary bodies, tuber cinereum, infundibulum, and neurohypophysis, but for physiological purposes the neurohypophysis is considered a distinct structure. The hypothalamus may be divided into five regions or areas (area hypothalamica rostralis, area hypothalamica dorsalis, area hypothalamica intermedia, area hypothalamica lateralis and area hypothalamica posterior) or into three longitudinal zones (periventricular zone, medial zone, and lateral zone). The hypothalamic nuclei constitute that part of the corticodiencephalic mechanism that activates, controls and integrates the peripheral autonomic mechanisms, endocrine activity, and many somatic functions, e.g., a general regulation of water balance, body temperature, sleep, and food intake, and the development of secondary sex characteristics. The hypothalamus secretes vasopressin and oxytocin, which are stored in the pituitary, as well as many releasing factors (hypophysiotropic hormones), by means of which it exerts control over functions of the adenohypophysis.[accessedResource: BTO:0000614][accessDate: 10-05-2010]
SAEL:52
EMAPA:17536
Multi-tissue structure which is the largest portion of diencephalon and is ventrally located. The hypothalamus arises near the end of the segmentation period and the embryonic hypothalamic region gives rise to the neurohypophysis and other diencephalic nuclei.[accessedResource: ZFA:0000032][accessDate: 10-05-2010]
A specialized brain region of the ventral diencephalon arising near the end of the segmentation period; the embryonic hypothalamic region will give rise to the posterior pituitary gland as well as a number of brain nuclei. Kimmel et al, 1995.[accessedResource: TAO:0000032][accessDate: 10-05-2010]
TAO:0000032
Preoptico-hypothalamic area[accessedResource: FMAID:62008][accessDate: 10-05-2010]
A specialized brain region of the ventral diencephalon arising near the end of the segmentation period; the embryonic hypothalamic region will give rise to the posterior pituitary gland as well as a number of brain nuclei. Kimmel et al, 1995.
NCIt:C22616
FMAID:62008
MA:0000173
EHDAA:5446
Preoptico-hypothalamic region
Preoptico-hypothalamic area
Tomasz Adamusiak
James Malone
SchneiderSL2
S49
SNU398
James Malone
Ele Holloway
PERSON: James Malone
twin study
A study type is an experimental factor describing the method of investigating particular types of research questions or solving particular types of problems.
study design
James Malone
agentes antimuscarinicos
agente antimuscarinico
Antimuskarinika
James Malone
CHEBI:48876
muscarinic antagonists
Antimuskarinikum
muscarinic acetylcholine receptor antagonist
http://www.ebi.ac.uk/efo/EFO_0001881
antimuscarinicos
muscarinic antagonist
agents antimuscariniques
antimuscarinic agents
A drug that binds to but does not activate muscarinic cholinergic receptors, thereby blocking the actions of endogenous acetylcholine or exogenous agonists.
MO_858
dye swap design
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158858&type=germplasm
CS57834 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158858&type=germplasm
CS57834
James Malone
MO_866
sampling time
Tomasz Adamusiak
Jie Zheng
James Malone
http://jaxmice.jax.org/strain/009260.html
ILSXISS13/TejJ
Tomasz Adamusiak
CL:0000101
sensory neuron
James Malone
Ele Holloway
Brown Adipose Tissue
bulbus arteriosus
obsolete_adipose tissue brown MMHCC
Brown Adipose Tissue[accessedResource: NCIt:C22704][accessDate: 10-05-2010]
true
Adipose Tissue - Brown (MMHCC)
Adipose Tissue - Brown (MMHCC)[accessedResource: NCIt:C22704][accessDate: 10-05-2010]
Use brown fat EFO_0000812 instead
Brown Fat[accessedResource: NCIt:C22704][accessDate: 10-05-2010]
Brown Fat
NCIt:C22704
DOID:10762
GeneRIF:15754412
PHT - Portal hypertension
GeneRIF:12730888
GeneRIF:15513950
SNOMEDCT:34742003
MSH:D006975
GeneRIF:12713865
Cruveilhier-Baumgarten Syndrome[accessedResource: MSH:D006975][accessDate: 10-05-2010]
GeneRIF:15222038
GeneRIF:14699044
GeneRIF:14525948
Liver cirrhosis with intrahepatic portal obstruction, HYPERTENSION, and patent UMBILICAL VEINS.[accessedResource: MSH:D006975][accessDate: 10-05-2010]
Hypertensions, Portal
Portal hypertension (disorder)
Abnormal increase of resistance to blood flow within the hepatic PORTAL SYSTEM, frequently seen in LIVER CIRRHOSIS and conditions with obstruction of the PORTAL VEIN.[accessedResource: MSH:D006975][accessDate: 10-05-2010]
Abnormal increase of resistance to blood flow within the hepatic PORTAL SYSTEM, frequently seen in LIVER CIRRHOSIS and conditions with obstruction of the PORTAL VEIN.
Liver cirrhosis with intrahepatic portal obstruction, HYPERTENSION, and patent UMBILICAL VEINS.
ICD9:572.3
Cruveilhier-Baumgarten Syndrome
James Malone
GeneRIF:14572769
GeneRIF:15513955
PHT - Portal hypertension[accessedResource: SNOMEDCT:34742003][accessDate: 10-05-2010]
GeneRIF:15849554
GeneRIF:15287858
Portal hypertension (disorder)[accessedResource: SNOMEDCT:34742003][accessDate: 10-05-2010]
Hypertensions, Portal[accessedResource: MSH:D006975][accessDate: 10-05-2010]
portal hypertension
GeneRIF:14990148
http://jaxmice.jax.org/strain/009317.html
ILSXISS84/TejJ
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158882&type=germplasm
CS57858 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158882&type=germplasm
CS57858
James Malone
http://jaxmice.jax.org/strain/001137.html
NIFSTD:birnlex_152
129P1/ReJ
Tomasz Adamusiak
James Malone
NIFSTD:birnlex_1710
EHDAA:5433
FMAID:62009
epithalamus
Tomasz Adamusiak
Brain structure which is part of the diencephalon and consists of the dorsal and ventral nuclei of the habenula, and two dorsal outgrowths, the epiphysis and the saccus dorsalis. From Neuroanatomy of the Zebrafish Brain.
MFO:0079980
ZFA:0000509
The caudal part of the roof and the adjoining lateral walls of the third ventricle of the diencephalon, comprising the habenular nuclei and their commissure, pineal body, and commissure of the epithalamus.
TAO:0000509
MA:0000172
BTO:0000175
James Malone
Brain structure which is part of the diencephalon and consists of the dorsal and ventral nuclei of the habenula, and two dorsal outgrowths, the epiphysis and the saccus dorsalis. From Neuroanatomy of the Zebrafish Brain.[accessedResource: ZFA:0000509][accessDate: 10-05-2010]
EMAPA:17532
MAT:0000422
The caudal part of the roof and the adjoining lateral walls of the third ventricle of the diencephalon, comprising the habenular nuclei and their commissure, pineal body, and commissure of the epithalamus.[accessedResource: BTO:0000175][accessDate: 10-05-2010]
MCF 10A
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158728&type=germplasm
CS57704 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158728&type=germplasm
CS57704
James Malone
GeneRIF:12827055
Pterygium (disorder)[accessedResource: SNOMEDCT:77489003][accessDate: 10-05-2010]
An abnormal triangular fold of membrane in the interpalpebral fissure, extending from the conjunctiva to the cornea, being immovably united to the cornea at its apex, firmly attached to the sclera throughout its middle portion, and merged with the conjunctiva at its base. (Dorland, 27th ed)[accessedResource: MSH:D011625][accessDate: 10-05-2010]
SNOMEDCT:193884009
ICD9:372.4
pterygium
MSH:D011625
GeneRIF:14533030
SNOMEDCT:193879003
GeneRIF:15523624
Pterygium, unspecified
GeneRIF:15273656
Pterygium (disorder)
Pterygiums[accessedResource: MSH:D011625][accessDate: 10-05-2010]
Conjunctival Pterygium[accessedResource: DOID:10526][accessDate: 10-05-2010]
Pterygium, NOS
Unspecified pterygium (disorder)
Web eye[accessedResource: SNOMEDCT:77489003][accessDate: 10-05-2010]
Web eye
Pterygium, NOS[accessedResource: SNOMEDCT:77489003][accessDate: 10-05-2010]
DOID:10526
Unspecified pterygium (disorder)[accessedResource: SNOMEDCT:193879003][accessDate: 10-05-2010]
Pterygiums
Conjunctival Pterygium
Pterygium NOS (disorder)
Pterygium NOS (disorder)[accessedResource: SNOMEDCT:193884009][accessDate: 10-05-2010]
SNOMEDCT:77489003
An abnormal triangular fold of membrane in the interpalpebral fissure, extending from the conjunctiva to the cornea, being immovably united to the cornea at its apex, firmly attached to the sclera throughout its middle portion, and merged with the conjunctiva at its base. (Dorland, 27th ed)
Pterygium, unspecified[accessedResource: ICD9:372.40][accessDate: 10-05-2010]
ICD9:372.40
James Malone
Waldenstrm macroglobulinemia (disorder)
primary macroglobulinemia
Waldenstrom's macroglob'naemia
macroglobulinemia
Waldenstrom's macroglob'naemia[accessedResource: DOID:9080][accessDate: 10-05-2010]
Macroglobulinemia (disorder)[accessedResource: DOID:9080][accessDate: 10-05-2010]
primary macroglobulinemia[accessedResource: DOID:9080][accessDate: 10-05-2010]
Waldenstrom's macroglobulinaemia
Lymphoplasmacytic Lymphoma/Waldenstrom Macroglobulinemia
Macroglobulinemia NOS (disorder)[accessedResource: DOID:9080][accessDate: 10-05-2010]
Waldenstrom's macroglobulinemia (morphologic abnormality)
Macroglobulinemia (disorder)
Tomasz Adamusiak
Lymphoplasmacytic Lymphoma/Waldenstrom Macroglobulinemia[accessedResource: DOID:9080][accessDate: 10-05-2010]
Waldenstrom's macroglobulinemia (disorder)[accessedResource: DOID:9080][accessDate: 10-05-2010]
Ele Holloway
Macroglobulinemia NOS (disorder)
DOID:9080
Waldenstrom's macroglobulinaemia[accessedResource: DOID:9080][accessDate: 10-05-2010]
Waldenstrm macroglobulinemia (disorder)[accessedResource: DOID:9080][accessDate: 10-05-2010]
Waldenstrom's macroglobulinemia (morphologic abnormality)[accessedResource: DOID:9080][accessDate: 10-05-2010]
Waldenstrom's macroglobulinemia (disorder)
reference sample
The act of directing or determining; regulation or maintenance of a function or action; a relation of constraint of one entity (thing or person or group) by another.
James Malone
A control role is borne by a material in a process in which results obtained from an experimental sample and a control sample are compared.
Controlling
NCIt:C61299
Controlled[accessedResource: NCIt:C61299][accessDate: 10-05-2010]
control
Controlling[accessedResource: NCIt:C61299][accessDate: 10-05-2010]
Controlled
The act of directing or determining; regulation or maintenance of a function or action; a relation of constraint of one entity (thing or person or group) by another.[accessedResource: NCIt:C61299][accessDate: 10-05-2010]
This is no longer needed - use process or study design (if the design is for study).
true
ChIP-Chip array
An experiment type is an experimental factor describing the area of technology that was used to perform an experiment.
obsolete_experiment type
http://jaxmice.jax.org/strain/009295.html
ILSXISS123/TejJ
Tomasz Adamusiak
MA:00001540
appendix
MAT:0000287
FMAID:14542
EV:0100080
Vermiform appendix
Organ with organ cavity which is continuous proximally with the cecum and distally terminates in the tip of the appendix. Examples: There is only one appendix.[accessedResource: FMAID:14542][accessDate: 10-05-2010]
James Malone
SAEL:7
Vermiform appendix[accessedResource: FMAID:14542][accessDate: 10-05-2010]
BTO:0000084
A narrow blind tube usually about three or four inches (7.6 to 10.2 centimeters) long that extends from the cecum in the lower right-hand part of the abdomen, has much lymphoid wall tissue, normally communicates with the cavity of the cecum, and represents an atrophied terminal part of the cecum.
Organ with organ cavity which is continuous proximally with the cecum and distally terminates in the tip of the appendix. Examples: There is only one appendix.
A narrow blind tube usually about three or four inches (7.6 to 10.2 centimeters) long that extends from the cecum in the lower right-hand part of the abdomen, has much lymphoid wall tissue, normally communicates with the cavity of the cecum, and represents an atrophied terminal part of the cecum.[accessedResource: BTO:0000084][accessDate: 10-05-2010]
Leukemia, disease (disorder)[accessedResource: SNOMEDCT:93143009][accessDate: 10-05-2010]
GeneRIF:15351976
Leukemia, no ICD-O subtype
Other specified leukaemia NOS[accessedResource: SNOMEDCT:188761009][accessDate: 10-05-2010]
GeneRIF:14996839
GeneRIF:11929767
GeneRIF:12096925
GeneRIF:15541480
GeneRIF:16179912
GeneRIF:15068389
Leukemia, disease[accessedResource: SNOMEDCT:93143009][accessDate: 10-05-2010]
A cancer that affects the blood or bone marrow characterized by an abnormal proliferation of blood cells.
[M]leukemia NOS (morphologic abnormality)
[X]Other specified leukaemias[accessedResource: SNOMEDCT:190161003][accessDate: 10-05-2010]
GeneRIF:14519654
GeneRIF:14607752
GeneRIF:12239155
GeneRIF:14512321
Other specified leukemia NOS[accessedResource: SNOMEDCT:188761009][accessDate: 10-05-2010]
GeneRIF:12127563
GeneRIF:15475071
chronic leukemia NOS (disorder)[accessedResource: DOID:1240][accessDate: 10-05-2010]
ICD9:207
GeneRIF:12203795
Leukaemia, no ICD-O subtype
GeneRIF:15388576
GeneRIF:15959530
GeneRIF:16088313
Leukemia NOS
GeneRIF:12773566
GeneRIF:14630792
Leukemia, disease (disorder)
Other specified leukaemia[accessedResource: SNOMEDCT:188751002][accessDate: 10-05-2010]
Leukemia of unspecified cell type (disorder)[accessedResource: SNOMEDCT:188762002][accessDate: 10-05-2010]
chronic leukemia - category (morphologic abnormality)[accessedResource: DOID:1240][accessDate: 10-05-2010]
Other leukemia of unspecified cell type (disorder)
leukemia
Leukemia NOS (disorder)
Other specified leukemia
GeneRIF:15860672
GeneRIF:11986947
GeneRIF:14726393
GeneRIF:15304397
Aleukemic leukemia [obs]
chronic leukemia NOS[accessedResource: DOID:1240][accessDate: 10-05-2010]
GeneRIF:12186695
SNOMEDCT:188767008
GeneRIF:14662771
[M]Leukemias unspecified
GeneRIF:12538698
chronic leukemia
GeneRIF:15512811
GeneRIF:14671643
[M]Leukemia NOS
[M]leukemia unspecified, NOS (morphologic abnormality)[accessedResource: SNOMEDCT:190029004][accessDate: 10-05-2010]
GeneRIF:12705477
GeneRIF:15833859
GeneRIF:12183458
GeneRIF:15516987
Leukemia NOS[accessedResource: SNOMEDCT:188767008][accessDate: 10-05-2010]
GeneRIF:14521941
[X]Other leukemia of unspecified cell type (disorder)[accessedResource: SNOMEDCT:190162005][accessDate: 10-05-2010]
GeneRIF:16130282
GeneRIF:15705792
GeneRIF:15687235
Leukaemia, disease[accessedResource: SNOMEDCT:93143009][accessDate: 10-05-2010]
GeneRIF:12515866
Leukaemia, NOS, without mention of remission
GeneRIF:12393632
GeneRIF:15144712
GeneRIF:15567461
GeneRIF:12700665
ICD9:208.9
SNOMEDCT:87163000
LEUKEMIA NOS W/O REMSION
Leukaemia morphology
GeneRIF:14691303
Other leukemia of unspecified cell type (disorder)[accessedResource: SNOMEDCT:188766004][accessDate: 10-05-2010]
Other specified leukaemia NOS
GeneRIF:15604256
GeneRIF:12592353
GeneRIF:12225794
GeneRIF:15298716
[X]Other specified leukaemias
Other leukemia of unspecified cell type
Leukemias, General[accessedResource: NCIt:C3161][accessDate: 10-05-2010]
OTH LEUK UNS CL W/O RMSN
[M]leukemias unspecified (morphologic abnormality)
Other leukemia of unspecified cell type[accessedResource: SNOMEDCT:188766004][accessDate: 10-05-2010]
[M]Leukaemia unspecified, NOS
GeneRIF:14988155
GeneRIF:16109713
GeneRIF:14990976
[M]Leukemia NOS[accessedResource: SNOMEDCT:190025005][accessDate: 10-05-2010]
[M]Leukaemia NOS[accessedResource: SNOMEDCT:190025005][accessDate: 10-05-2010]
GeneRIF:14689061
GeneRIF:15199122
Leukaemia NOS[accessedResource: SNOMEDCT:188767008][accessDate: 10-05-2010]
GeneRIF:16271957
Subacute leukemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 10-05-2010]
GeneRIF:15183893
SNOMEDCT:93143009
GeneRIF:15475073
chronic leukaemia NOS
[M]Leukemia unspecified, NOS[accessedResource: SNOMEDCT:190029004][accessDate: 10-05-2010]
GeneRIF:16005964
Other specified leukemia NOS
GeneRIF:12393620
GeneRIF:15193261
ICD9:207.8
chronic leukemia - category (morphologic abnormality)
Aleukemic leukemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 10-05-2010]
GeneRIF:12688322
GeneRIF:15735695
GeneRIF:14611815
Other leukaemia of unspecified cell type[accessedResource: SNOMEDCT:188766004][accessDate: 10-05-2010]
[M]Leukemia unspecified, NOS
Subacute leukaemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 10-05-2010]
[M]Leukaemias unspecified[accessedResource: SNOMEDCT:190024009][accessDate: 10-05-2010]
GeneRIF:15454492
GeneRIF:15895983
Chronic leukaemia [obs]
Other leukaemia of unspecified cell type
Other specified leukaemia
GeneRIF:16002684
GeneRIF:11986949
Aleukaemic leukaemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 10-05-2010]
GeneRIF:16210627
GeneRIF:15611294
GeneRIF:15583855
GeneRIF:12482966
[M]leukemia unspecified, NOS (morphologic abnormality)
GeneRIF:12665591
GeneRIF:12700639
LEUKEMIA NOS W/O REMSION[accessedResource: ICD9:208.90][accessDate: 10-05-2010]
GeneRIF:15674415
[M]leukemia NOS (morphologic abnormality)[accessedResource: SNOMEDCT:190025005][accessDate: 10-05-2010]
GeneRIF:12438221
Other specified leukemia NOS (disorder)
GeneRIF:11937542
Leukemia of unspecified cell type (disorder)
GeneRIF:12411326
Leukaemia[accessedResource: SNOMEDCT:87163000][accessDate: 10-05-2010]
Other specified leukemia NOS (disorder)[accessedResource: SNOMEDCT:188761009][accessDate: 10-05-2010]
Unspecified leukemia without mention of remission
Leukemia, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:87163000][accessDate: 10-05-2010]
GeneRIF:15723065
OTH SPF LEUK W/O REMSION[accessedResource: ICD9:207.80][accessDate: 10-05-2010]
Blood (Leukemia)
[X]Other leukaemia of unspecified cell type
[X]Other leukemia of unspecified cell type (disorder)
Other leukemia of unspecified cell type without mention of remission
GeneRIF:11999556
GeneRIF:12145702
GeneRIF:12002276
GeneRIF:12901974
Leukemias, General
Subacute leukemia [obs]
GeneRIF:12648450
GeneRIF:15585652
ICD9:207.81
GeneRIF:16081688
Leukemia, NOS, without mention of remission
Leukaemia of unspecified cell type[accessedResource: SNOMEDCT:188762002][accessDate: 10-05-2010]
GeneRIF:15004329
GeneRIF:15645140
GeneRIF:15723338
GeneRIF:11920534
Leukemia, NOS, without mention of remission[accessedResource: SNOMEDCT:93143009][accessDate: 10-05-2010]
SNOMEDCT:188751002
GeneRIF:12511424
OTH SPF LEUK W/O REMSION
SNOMEDCT:190024009
chronic leukemia NOS
GeneRIF:12506112
NCIt:C3161
GeneRIF:11855785
GeneRIF:15856017
GeneRIF:14737102
GeneRIF:11856346
GeneRIF:15187020
ICD9:207.80
GeneRIF:16139274
GeneRIF:12139489
chronic leukemia[accessedResource: DOID:1240][accessDate: 10-05-2010]
GeneRIF:15845894
Other leukemia of unspecified cell type in remission[accessedResource: ICD9:208.81][accessDate: 10-05-2010]
[M]Leukaemia NOS
Leukemia, morphology (morphologic abnormality)
OTH SPF LEUK W REMSION[accessedResource: ICD9:207.81][accessDate: 10-05-2010]
GeneRIF:12586625
GeneRIF:12613527
A malignant (clonal) hematologic disorder, involving hematopoietic stem cells and characterized by the presence of primitive or atypical myeloid or lymphoid cells in the bone marrow and the blood. Leukemias are classified as acute or chronic based on the degree of cellular differentiation and the predominant cell type present. Leukemia is usually associated with anemia, fever, hemorrhagic episodes, and splenomegaly. Common leukemias include acute myeloid leukemia, chronic myelogenous leukemia, acute lymphoblastic or precursor lymphoblastic leukemia, and chronic lymphocytic leukemia. Treatment is vital to patient survival; untreated, the natural course of acute leukemias is normally measured in weeks or months, while that of chronic leukemias is more often measured in months or years.
Other specified leukemia[accessedResource: SNOMEDCT:188751002][accessDate: 10-05-2010]
SNOMEDCT:188761009
GeneRIF:14578205
GeneRIF:12096343
OTH LEUK UNS CL W/O RMSN[accessedResource: ICD9:208.80][accessDate: 10-05-2010]
GeneRIF:12553058
GeneRIF:12496475
Leukaemia
ICD9:208.90
Leukaemia, disease
GeneRIF:12008082
GeneRIF:12646947
GeneRIF:15325703
Leukemia, disease
A malignant (clonal) hematologic disorder, involving hematopoietic stem cells and characterized by the presence of primitive or atypical myeloid or lymphoid cells in the bone marrow and the blood. Leukemias are classified as acute or chronic based on the degree of cellular differentiation and the predominant cell type present. Leukemia is usually associated with anemia, fever, hemorrhagic episodes, and splenomegaly. Common leukemias include acute myeloid leukemia, chronic myelogenous leukemia, acute lymphoblastic or precursor lymphoblastic leukemia, and chronic lymphocytic leukemia. Treatment is vital to patient survival; untreated, the natural course of acute leukemias is normally measured in weeks or months, while that of chronic leukemias is more often measured in months or years.[accessedResource: NCIt:C3161][accessDate: 10-05-2010]
[X]Other specified leukemias (disorder)[accessedResource: SNOMEDCT:190161003][accessDate: 10-05-2010]
chronic leukemia of unspecified cell type
GeneRIF:11999550
GeneRIF:15223639
James Malone
Leukemias
[X]Other specified leukemias (disorder)
GeneRIF:14615372
Leukemia, morphology (morphologic abnormality)[accessedResource: SNOMEDCT:87163000][accessDate: 10-05-2010]
[X]Other specified leukemias
GeneRIF:12239152
GeneRIF:11830488
Other leukemia of unspecified cell type in remission
GeneRIF:11764099
[M]Leukaemias unspecified
OTH LEUK UNS CL W RMSON
Aleukaemic leukaemia [obs]
GeneRIF:12138900
GeneRIF:15723339
GeneRIF:12799277
Other specified leukemia without mention of remission[accessedResource: ICD9:207.80][accessDate: 10-05-2010]
Leukemia NOS (disorder)[accessedResource: SNOMEDCT:188767008][accessDate: 10-05-2010]
SNOMEDCT:188766004
[X]Other specified leukemias[accessedResource: SNOMEDCT:190161003][accessDate: 10-05-2010]
Chronic leukemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 10-05-2010]
GeneRIF:15964800
SNOMEDCT:190161003
GeneRIF:12145704
Chronic leukaemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 10-05-2010]
Leukemias[accessedResource: NCIt:C3161][accessDate: 10-05-2010]
GeneRIF:12722639
chronic leukemia, disease (disorder)[accessedResource: DOID:1240][accessDate: 10-05-2010]
Leukaemia, NOS, without mention of remission[accessedResource: SNOMEDCT:93143009][accessDate: 10-05-2010]
SNOMEDCT:190029004
GeneRIF:15744340
Other specified leukemia without mention of remission
GeneRIF:15545599
GeneRIF:15298960
Leukemia of unspecified cell type[accessedResource: SNOMEDCT:188762002][accessDate: 10-05-2010]
[M]Leukaemia unspecified, NOS[accessedResource: SNOMEDCT:190029004][accessDate: 10-05-2010]
chronic leukaemia NOS[accessedResource: DOID:1240][accessDate: 10-05-2010]
GeneRIF:12682649
chronic leukemia NOS (disorder)
GeneRIF:15070702
Leukemia, no ICD-O subtype (morphologic abnormality)
This is potentially too broad as well as overlaps with lymphoma and should be obsoleted.
Other specified leukemia in remission[accessedResource: ICD9:207.81][accessDate: 10-05-2010]
[X]Other leukemia of unspecified cell type
GeneRIF:12663445
A cancer that affects the blood or bone marrow characterized by an abnormal proliferation of blood cells.[accessedResource: DOID:1240][accessDate: 10-05-2010]
chronic leukemia of unspecified cell type[accessedResource: DOID:1240][accessDate: 10-05-2010]
GeneRIF:14757439
Other leukemia of unspecified cell type without mention of remission[accessedResource: ICD9:208.80][accessDate: 10-05-2010]
GeneRIF:12208881
GeneRIF:10437917
OTH LEUK UNS CL W RMSON[accessedResource: ICD9:208.81][accessDate: 10-05-2010]
[M]Leukemias unspecified[accessedResource: SNOMEDCT:190024009][accessDate: 10-05-2010]
GeneRIF:11893077
DOID:1240
Leukemia, no ICD-O subtype[accessedResource: SNOMEDCT:87163000][accessDate: 10-05-2010]
Leukemia morphology[accessedResource: SNOMEDCT:87163000][accessDate: 10-05-2010]
Leukaemia NOS
Leukaemia of unspecified cell type
SNOMEDCT:190025005
ICD9:208.8
ICD9:208.80
GeneRIF:12533044
Other specified leukemia in remission
GeneRIF:11979742
GeneRIF:11823049
Blood (Leukemia)[accessedResource: NCIt:C3161][accessDate: 10-05-2010]
Subacute leukaemia [obs]
GeneRIF:15856008
GeneRIF:15073036
Leukaemia, no ICD-O subtype[accessedResource: SNOMEDCT:87163000][accessDate: 10-05-2010]
GeneRIF:12414343
Leukemia morphology
[X]Other leukaemia of unspecified cell type[accessedResource: SNOMEDCT:190162005][accessDate: 10-05-2010]
GeneRIF:15515013
GeneRIF:11489963
GeneRIF:12682273
GeneRIF:16103065
GeneRIF:12204872
[X]Other leukemia of unspecified cell type[accessedResource: SNOMEDCT:190162005][accessDate: 10-05-2010]
Unspecified leukemia without mention of remission[accessedResource: ICD9:208.90][accessDate: 10-05-2010]
GeneRIF:15026336
chronic leukemia, disease (disorder)
GeneRIF:12217801
GeneRIF:15704129
Leukemia of unspecified cell type
[M]leukemias unspecified (morphologic abnormality)[accessedResource: SNOMEDCT:190024009][accessDate: 10-05-2010]
GeneRIF:12592338
GeneRIF:15725473
GeneRIF:12816872
ICD9:208.81
GeneRIF:11869944
GeneRIF:12454742
GeneRIF:15815718
GeneRIF:15834506
GeneRIF:14704031
GeneRIF:12384147
GeneRIF:15676214
Leukaemia morphology[accessedResource: SNOMEDCT:87163000][accessDate: 10-05-2010]
GeneRIF:12002748
GeneRIF:11996108
OTH SPF LEUK W REMSION
GeneRIF:12091340
GeneRIF:11792409
Other specified leukemia (disorder)
ICD9:208
SNOMEDCT:188762002
Other specified leukemia (disorder)[accessedResource: SNOMEDCT:188751002][accessDate: 10-05-2010]
Chronic leukemia [obs]
GeneRIF:12082639
GeneRIF:11922610
GeneRIF:11042511
SNOMEDCT:190162005
GeneRIF:15756419
MO_885
replicate design
Tomasz Adamusiak
FBbt:00004959
paragonium
paragonium[accessedResource: FBbt:00004959][accessDate: 10-05-2010]
male accessory gland
James Malone
MO_565
all pairs
Tomasz Adamusiak
A plasma cell disorder in which an abnormal amount of a single immunoglobulin is present in the serum. Up to 25% of cases of monoclonal gammopathy of undetermined significance (MGUS) progress to a B-cell malignancy or myeloma. MGUS may occur in conjunction with various carcinomas, chronic inflammatory and infectious conditions, and other diseases.
MGUS - Monoclonal gammopathy of uncertain significance
Benign Monoclonal Gammopathy
monoclonal gammopathy of uncertain significance
Monoclonal gammopathy of undetermined significance (morphologic abnormality)[accessedResource: DOID:7442][accessDate: 10-05-2010]
Benign Monoclonal Gammopathy[accessedResource: NCIt:C3996][accessDate: 10-05-2010]
GeneRIF:14677065
DOID:7442
SNOMEDCT:277577000
monoclonal gammopathy
Monoclonal Gammopathy of Unknown Significance
James Malone
NCIt:C3996
Monoclonal Gammopathy of Unknown Significance[accessedResource: NCIt:C3996][accessDate: 10-05-2010]
MGUS
A plasma cell disorder in which an abnormal amount of a single immunoglobulin is present in the serum. Up to 25% of cases of monoclonal gammopathy of undetermined significance (MGUS) progress to a B-cell malignancy or myeloma. MGUS may occur in conjunction with various carcinomas, chronic inflammatory and infectious conditions, and other diseases.[accessedResource: NCIt:C3996][accessDate: 10-05-2010]
Monoclonal gammopathy of undetermined significance
Paraproteinaemia
Monoclonal gammopathy of undetermined significance[accessedResource: SNOMEDCT:35601003][accessDate: 10-05-2010]
monoclonal gammopathy of uncertain significance[accessedResource: DOID:7442][accessDate: 10-05-2010]
MGUS - Monoclonal gammopathy of uncertain significance[accessedResource: SNOMEDCT:277577000][accessDate: 10-05-2010]
SNOMEDCT:35601003
Paraproteinemia
Monoclonal gammopathy of uncertain significance (disorder)
Monoclonal gammopathy of uncertain significance (disorder)[accessedResource: SNOMEDCT:277577000][accessDate: 10-05-2010]
Paraproteinaemia[accessedResource: SNOMEDCT:35601003][accessDate: 10-05-2010]
Monoclonal gammopathy of undetermined significance (morphologic abnormality)
Paraproteinemia[accessedResource: SNOMEDCT:35601003][accessDate: 10-05-2010]
MGUS[accessedResource: SNOMEDCT:35601003][accessDate: 10-05-2010]
James Malone
HS578T
A lung structuret is a respiratory system component which is part of a lung.
lung structure
James Malone
breast tumor luminal
James Malone
mesangial cell[accessedResource: CL:0000777][accessDate: 10-05-2010]
A tissue-resident macrophage of the renal glomerular mesangium.[accessedResource: CL:0000777][accessDate: 10-05-2010]
CL:0000777
James Malone
mesangial phagocyte
mesangial cell
A tissue-resident macrophage of the renal glomerular mesangium.
CL:0000558
An immature erythrocyte showing a basophilic reticulum under vital staining.
An immature erythrocyte showing a basophilic reticulum under vital staining.[accessedResource: CL:0000558][accessDate: 10-05-2010]
reticulocyte
Tomasz Adamusiak
Jie Zheng
H4
James Malone
Ele Holloway
true
obsolete_percent oxygen concentration
embryonic day 12.5
Tomasz Adamusiak
Jie Zheng
Helen Parkinson
microarray
An instrument which consists of nucleic acid or protein molecules bound to a substrate
array
IB3-1
James Malone
HT1376
Ele Holloway
James Malone
HT-1376
HT 1376
Abdominal part of aorta
Pars abdominalis aortae[accessedResource: FMAID:3789][accessDate: 10-05-2010]
Jie Zheng
Descending abdominal aorta[accessedResource: FMAID:3789][accessDate: 10-05-2010]
abdominal aorta
Descending abdominal aorta
FMAID:3789
Abdominal part of aorta[accessedResource: FMAID:3789][accessDate: 10-05-2010]
Pars abdominalis aortae
Tomasz Adamusiak
2.5
true
obsolete_liver heptocellular carcinoma
James Malone
duplicate of EFO_0000182
http://www.arabidopsis.org/servlets/TairObject?id=1005158898&type=germplasm
CS57874 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158898&type=germplasm
CS57874
James Malone
Well differentiated human gastric adenocarcinoma cell line.[accessedResource: BTO:0002383][accessDate: 10-05-2010]
MKN74
MKN-74 cell
MKN-74 cell[accessedResource: BTO:0002383][accessDate: 10-05-2010]
Ele Holloway
MKN74 cell
Well differentiated human gastric adenocarcinoma cell line.
BTO:0002383
JCRB0255
MKN-74
MKN74 cell[accessedResource: BTO:0002383][accessDate: 10-05-2010]
James Malone
glandula suprarenalis[accessedResource: BTO:0000047][accessDate: 10-05-2010]
NCIt:C12666
glandula suprarenalis
adrenal capsule[accessedResource: BTO:0000047][accessDate: 10-05-2010]
Suprarenal gland[accessedResource: FMAID:9604][accessDate: 10-05-2010]
chromafin cell
Adrenals
epinephros
MAT:0000071
chromafin cell[accessedResource: TAO:0009167][accessDate: 10-05-2010]
adrenal
suprarenal capsule
suprarenal capsule[accessedResource: BTO:0000047][accessDate: 10-05-2010]
A flattened, roughly triangular body resting upon the upper end of each kidney; it is one of the ductless glands furnishing internal secretions (epinephrine and norepinephrine from the medulla and steroid hormones from the cortex).
A flattened, roughly triangular body resting upon the upper end of each kidney; it is one of the ductless glands furnishing internal secretions (epinephrine and norepinephrine from the medulla and steroid hormones from the cortex).[accessedResource: NCIt:C12666][accessDate: 10-05-2010]
XAO:0000164
atrabiliary capsule
BTO:0000047
Adrenal Glands[accessedResource: NCIt:C12666][accessDate: 10-05-2010]
atrabiliary capsule[accessedResource: BTO:0000047][accessDate: 10-05-2010]
Adrenals[accessedResource: NCIt:C12666][accessDate: 10-05-2010]
EV:0100135
adrenal medulla cell[accessedResource: TAO:0009167][accessDate: 10-05-2010]
SAEL:3
epinephros[accessedResource: BTO:0000047][accessDate: 10-05-2010]
Either of a pair of complex endocrine organs near the anterior medial border of the kidney consisting of a mesodermal cortex that produces glucocorticoid, mineralocorticoid, and androgenic hormones and an ectodermal medulla that produces epinephrine and norepinephrine.[accessedResource: BTO:0000047][accessDate: 10-05-2010]
adrenal capsule
adrenal[accessedResource: BTO:0000047][accessDate: 10-05-2010]
EMAPA:18426
Suprarenal gland
Either of a pair of complex endocrine organs near the anterior medial border of the kidney consisting of a mesodermal cortex that produces glucocorticoid, mineralocorticoid, and androgenic hormones and an ectodermal medulla that produces epinephrine and norepinephrine.
TAO:0009167
adrenal medulla cell
Adrenal glands
FMAID:9604
adrenal gland
MA:0000116
James Malone
NCIH1581
James Malone
Ele Holloway
Raji
James Malone
Ele Holloway
XAO:0000163
Thymus
Thymus[accessedResource: FMAID:9607][accessDate: 10-05-2010]
ZFA:0001078
TAO:0001078
MA:0000142
true
FMAID:9607
Thymus gland[accessedResource: FMAID:9607][accessDate: 10-05-2010]
EHDAA:9119
MFO:0003240
EV:0100138
Thymus gland
SAEL:107
obsolete_thymus
EMAPA:18768
MAT:0000080
pioglitazone
James Malone
CCc1ccc(CCOc2ccc(CC3SC(=O)NC3=O)cc2)nc1
(+-)-5-((4-(2-(5-ethyl-2-pyridinyl)ethoxy)phenyl)methyl)-2,4-thiazolidinedione
pioglitazonum
A thiazolidenedione that has formula C19H20N2O3S.
InChIKey=HYAFETHFCAUJAY-PKSOQXRJCR
http://www.ebi.ac.uk/efo/EFO_0001592
C19H20N2O3S
InChI=1/C19H20N2O3S/c1-2-13-3-6-15(20-12-13)9-10-24-16-7-4-14(5-8-16)11-17-18(22)21-19(23)25-17/h3-8,12,17H,2,9-11H2,1H3,(H,21,22,23)/f/h21H
5-{4-[2-(5-ethylpyridin-2-yl)ethoxy]benzyl}-1,3-thiazolidine-2,4-dione
CHEBI:8228
pioglitazona
NCIH295R
James Malone
Ele Holloway
Uninfected class is a disposition in which the bearer is not known to be affected by a disease withtin the context of a study
uninfected
James Malone
Psychiatric illness or diseases manifested by breakdowns in the adaptational process expressed primarily as abnormalities of thought, feeling, and behavior producing either distress or impairment of function (MeSH).[accessedResource: NIFSTD:birnlex_12669][accessDate: 10-05-2010]
Behavior Disorder
Behavior Disorder[accessedResource: NIFSTD:birnlex_12669][accessDate: 10-05-2010]
Mental Disorder
Psychiatric illness or diseases manifested by breakdowns in the adaptational process expressed primarily as abnormalities of thought, feeling, and behavior producing either distress or impairment of function (MeSH).
Tomasz Adamusiak
mental or behavioural disorder
NIFSTD:birnlex_12669
Mental Disorder[accessedResource: NIFSTD:birnlex_12669][accessDate: 10-05-2010]
James Malone
An immature B cell is a precursor B cell that has the phenotype surface IgM-positive and surface IgD-negative, and have not undergone class immunoglobulin class switching or peripheral encounter with antigen and activation.
James Malone
immature B cell
newly formed B Cell[accessedResource: CL:0000816][accessDate: 10-05-2010]
newly formed B Cell
CL:0000816
An immature B cell is a precursor B cell that has the phenotype surface IgM-positive and surface IgD-negative, and have not undergone class immunoglobulin class switching or peripheral encounter with antigen and activation.[accessedResource: CL:0000816][accessDate: 10-05-2010]
immature B lymphocyte
immature B lymphocyte[accessedResource: CL:0000816][accessDate: 10-05-2010]
DOID:9952
Precursor cell lymphoblastic leukaemia, not phenotyped[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
Acute lymphatic leukemia[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
Precursor cell lymphoblastic leukemia[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
Acute lymphoblastic leukemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
ALL
Acute lymphoblastic leukemia, L2 type
Precursor Lymphoblastic Leukemia[accessedResource: NCIt:C3167][accessDate: 10-05-2010]
Acute lymphoid leukaemia, disease[accessedResource: SNOMEDCT:91857003][accessDate: 10-05-2010]
GeneRIF:12065898
Acute lymphoblastic leukemia-lymphoma
Leukemia with an acute onset, characterized by the presence of lymphoblasts in the bone marrow and the peripheral blood. It includes the precursor B lymphoblastic leukemia and precursor T lymphoblastic leukemia.
GeneRIF:12408765
GeneRIF:15604885
GeneRIF:16138344
[M]Acute lymphoid leukemia[accessedResource: SNOMEDCT:190034000][accessDate: 10-05-2010]
GeneRIF:14959847
Lymphoblastic leukemia, L2 type
Leukemia with an acute onset, characterized by the presence of lymphoblasts in the bone marrow and the peripheral blood. It includes the acute B lymphoblastic leukemia and acute T lymphoblastic leukemia.
[M]Acute lymphoid leukemia
Acute lymphoid leukemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
[M]Acute lymphoid leukemia (morphologic abnormality)
Acute lymphoblastic leukaemia-lymphoma[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
Acute Lymphocytic Leukemia
Acute Lymphogenous Leukemia
SNOMEDCT:190034000
Precursor cell lymphoblastic leukemia (morphologic abnormality)[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
GeneRIF:14562113
Lymphoblastic leukaemia, L2 type
FAB L2[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
Acute lymphoid leukaemia, L2 type
Acute lymphoid leukaemia, disease
Acute lymphoid leukemia, disease (disorder)[accessedResource: SNOMEDCT:91857003][accessDate: 10-05-2010]
Acute lymphocytic leukaemia, L2 type
GeneRIF:15390181
James Malone
GeneRIF:12008081
GeneRIF:12091359
Acute lymphatic leukemia, L2 type
ALL - Acute Lymphocytic Leukemia[accessedResource: NCIt:C3167][accessDate: 10-05-2010]
ALL - Acute Lymphocytic Leukemia
Acute Lymphocytic Leukemias[accessedResource: NCIt:C3167][accessDate: 10-05-2010]
GeneRIF:14751048
ACT LYM LEUK W/O RMSION
Precursor cell lymphoblastic leukemia
Acute Lymphocytic Leukaemia[accessedResource: NCIt:C3167][accessDate: 10-05-2010]
Acute lymphatic leukaemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
Acute lymphoblastic leukaemia, precursor-cell type[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
Lymphoblastic Leukemia[accessedResource: NCIt:C3167][accessDate: 10-05-2010]
GeneRIF:12203795
GeneRIF:12163057
FAB L2
Acute lymphoid leukemia, disease (disorder)
Acute lymphatic leukemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
Acute lymphoblastic leukemia, precursor-cell type[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
Acute lymphoid leukemia[accessedResource: SNOMEDCT:91857003][accessDate: 10-05-2010]
Precursor cell lymphoblastic leukemia, no ICD-O subtype (morphologic abnormality)
Precursor Lymphoblastic Leukemia
GeneRIF:16012335
Acute Lymphogenous Leukemia[accessedResource: NCIt:C3167][accessDate: 10-05-2010]
GeneRIF:14613996
Acute lymphocytic leukemia, L2 type
Acute lymphoid leukemia, L2 type
Acute lymphocytic leukaemia
Acute lymphatic leukaemia[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
Acute lymphocytic leukemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
Precursor cell lymphoblastic leukaemia
Lymphoblastic leukaemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
GeneRIF:11964305
Precursor cell lymphoblastic leukemia, not phenotyped
Lymphoblastic leukaemia
Acute lymphatic leukaemia, L2 type
GeneRIF:15878620
Leukemia with an acute onset, characterized by the presence of lymphoblasts in the bone marrow and the peripheral blood. It includes the acute B lymphoblastic leukemia and acute T lymphoblastic leukemia.[accessedResource: NCIt:C3167][accessDate: 10-05-2010]
ALL - Acute lymphoblastic leukaemia[accessedResource: SNOMEDCT:91857003][accessDate: 10-05-2010]
[M]Acute lymphoid leukaemia[accessedResource: SNOMEDCT:190034000][accessDate: 10-05-2010]
Precursor cell lymphoblastic leukemia, not phenotyped[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
ALL - Acute lymphoblastic leukemia[accessedResource: SNOMEDCT:91857003][accessDate: 10-05-2010]
Acute lymphoblastic leukaemia, precursor-cell type
Acute lymphatic leukemia
Acute lymphoblastic leukaemia-lymphoma
Lymphoblastic leukaemia[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
GeneRIF:15001471
GeneRIF:14762685
GeneRIF:12958073
GeneRIF:12133444
Acute lymphoblastic leukaemia, L2 type
GeneRIF:15613101
Lymphoblastic leukemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
ICD9:204.00
SNOMEDCT:128822004
GeneRIF:15717687
Precursor cell lymphoblastic leukemia (morphologic abnormality)
ACT LYM LEUK W/O RMSION[accessedResource: ICD9:204.00][accessDate: 10-05-2010]
Acute lymphoblastic leukaemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
Acute lymphoblastic leukemia, precursor-cell type
ALL - Acute lymphoblastic leukemia
Acute lymphoid leukemia without mention of remission[accessedResource: ICD9:204.00][accessDate: 10-05-2010]
Acute lymphocytic leukaemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
GeneRIF:12879482
GeneRIF:15297414
[M]Acute lymphoid leukemia (morphologic abnormality)[accessedResource: SNOMEDCT:190034000][accessDate: 10-05-2010]
Acute lymphoblastic leukemia-lymphoma[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
Acute lymphoid leukemia without mention of remission
Precursor cell lymphoblastic leukemia, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
SNOMEDCT:91857003
Acute lymphoid leukemia, disease[accessedResource: SNOMEDCT:91857003][accessDate: 10-05-2010]
GeneRIF:12412576
Acute lymphoid leukaemia[accessedResource: SNOMEDCT:91857003][accessDate: 10-05-2010]
GeneRIF:12532332
Lymphoblastic Leukemia
Acute lymphoid leukemia, disease
GeneRIF:11855781
Acute lymphoid leukaemia
ALL[accessedResource: NCIt:C3167][accessDate: 10-05-2010]
Acute lymphoid leukaemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
Precursor cell lymphoblastic leukaemia[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
GeneRIF:14580777
NCIt:C3167
[M]Acute lymphoid leukaemia
GeneRIF:12142782
Precursor cell lymphoblastic leukaemia, not phenotyped
GeneRIF:12854903
GeneRIF:15353558
Acute lymphoid leukemia
ALL - Acute lymphoblastic leukaemia
GeneRIF:15618957
ICD9:204.0
Acute Lymphocytic Leukemias
Acute lymphoblastic leukaemia[accessedResource: SNOMEDCT:128822004][accessDate: 10-05-2010]
GeneRIF:14706337
acute lymphoblastic leukemia
Acute lymphatic leukaemia
Acute lymphoblastic leukaemia
Acute Lymphocytic Leukemia[accessedResource: NCIt:C3167][accessDate: 10-05-2010]
MO_626
A microarray wash station is an instrument used to wash or stain microarrays.
microarray wash station
James Malone
KS - Kaposi's sarcoma
GeneRIF:15280476
[M]Kaposi's sarcoma[accessedResource: SNOMEDCT:49937004][accessDate: 10-05-2010]
GeneRIF:15964376
GeneRIF:15220403
Kaposi - Kaposi's Sarcoma[accessedResource: NCIt:C9087][accessDate: 10-05-2010]
ICD9:176
GeneRIF:15471957
Kaposi's sarcoma
SPF STS - KPSI'S SARCOMA
GeneRIF:12719589
Multiple hemorrhagic sarcoma[accessedResource: SNOMEDCT:49937004][accessDate: 10-05-2010]
GeneRIF:12531804
A malignant neoplasm characterized by a vascular proliferation which usually contains blunt endothelial cells. Erythrocyte extravasation and hemosiderin deposition are frequently present. The most frequent site of involvement is the skin; however it may also occur internally. It generally develops in people with compromised immune systems including those with acquired immune deficiency syndrome (AIDS).
GeneRIF:15246275
Epidemic Kaposi's sarcoma[accessedResource: SNOMEDCT:109385007][accessDate: 10-05-2010]
GeneRIF:12513914
[X]Kaposi's sarcoma, unspecified[accessedResource: SNOMEDCT:190112000][accessDate: 10-05-2010]
KAPOSI'S SARCOMA NOS
ICD9:176.9
Multiple haemorrhagic sarcoma[accessedResource: SNOMEDCT:49937004][accessDate: 10-05-2010]
SNOMEDCT:109385007
A malignant neoplasm characterized by a vascular proliferation which usually contains blunt endothelial cells. Erythrocyte extravasation and hemosiderin deposition are frequently present. The most frequent site of involvement is the skin; however it may also occur internally. It generally develops in people with compromised immune systems including those with acquired immune deficiency syndrome (AIDS).[accessedResource: NCIt:C9087][accessDate: 10-05-2010]
[M]Kaposi's sarcoma
Kaposi Sarcoma[accessedResource: NCIt:C9087][accessDate: 10-05-2010]
Kaposi's sarcoma, morphology
Multiple hemorrhagic sarcoma
Kaposi's sarcoma, unspecified[accessedResource: ICD9:176.9][accessDate: 10-05-2010]
SNOMEDCT:49937004
GeneRIF:12875994
Kaposi's sarcoma, other specified sites
NCIt:C9087
James Malone
Kaposi's sarcoma, unspecified
GeneRIF:12750160
A sarcoma that is caused by human herpesvirus 8 (HHV8), which is also called Kaposi's sarcoma-associated herpesvirus (KSHV).[accessedResource: DOID:8632][accessDate: 10-05-2010]
Kaposi's sarcoma (morphologic abnormality)
GeneRIF:14627715
DOID:8632
GeneRIF:15765147
Kaposi's sarcoma (disorder)
Kaposi's sarcoma, morphology[accessedResource: SNOMEDCT:49937004][accessDate: 10-05-2010]
GeneRIF:15331727
KAPOSI'S SARCOMA NOS[accessedResource: ICD9:176.9][accessDate: 10-05-2010]
[X]Kaposi's sarcoma, unspecified (disorder)
Kaposi's sarcoma (disorder)[accessedResource: SNOMEDCT:109385007][accessDate: 10-05-2010]
GeneRIF:15194757
GeneRIF:15994556
GeneRIF:12915579
GeneRIF:12176919
Kaposi's sarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:49937004][accessDate: 10-05-2010]
SNOMEDCT:190112000
[X]Kaposi's sarcoma, unspecified (disorder)[accessedResource: SNOMEDCT:190112000][accessDate: 10-05-2010]
[X]Kaposi's sarcoma, unspecified
Kaposi's sarcoma, morphology (morphologic abnormality)
A sarcoma that is caused by human herpesvirus 8 (HHV8), which is also called Kaposi's sarcoma-associated herpesvirus (KSHV).
GeneRIF:12592400
Kaposi's sarcoma (clinical)
Kaposi's sarcoma (clinical)[accessedResource: SNOMEDCT:109385007][accessDate: 10-05-2010]
Multiple haemorrhagic sarcoma
KS
KS - Kaposi's sarcoma[accessedResource: SNOMEDCT:109385007][accessDate: 10-05-2010]
Kaposi's sarcoma, morphology (morphologic abnormality)[accessedResource: SNOMEDCT:49937004][accessDate: 10-05-2010]
GeneRIF:12388718
KS[accessedResource: NCIt:C9087][accessDate: 10-05-2010]
Kaposi's sarcoma, other specified sites[accessedResource: ICD9:176.8][accessDate: 10-05-2010]
SPF STS - KPSI'S SARCOMA[accessedResource: ICD9:176.8][accessDate: 10-05-2010]
ICD9:176.8
Epidemic Kaposi's sarcoma
Kaposi Sarcoma
GeneRIF:12915577
Kaposi - Kaposi's Sarcoma
GeneRIF:12388720
Nucleus of basis pedunculi[accessedResource: FMAID:67947][accessDate: 10-05-2010]
The substantia nigra is located in the mesencephalon (mid brain) region of the brain. It is part of the basal ganglia.[accessedResource: BTO:0000143][accessDate: 10-05-2010]
MAT:0000504
BTO:0000143
Subdivision of the midbrain anterior to the midbrain tegmentum which contains darkly pigmented neurons.
FMAID:67947
James Malone
Soemmering's substance
substantia nigra
Soemmering's substance[accessedResource: FMAID:67947][accessDate: 10-05-2010]
EV:0100247
MA:0000210
Nucleus of basis pedunculi
The substantia nigra is located in the mesencephalon (mid brain) region of the brain. It is part of the basal ganglia.
Subdivision of the midbrain anterior to the midbrain tegmentum which contains darkly pigmented neurons.[accessedResource: FMAID:67947][accessDate: 10-05-2010]
MAT:0000271
FBbt:00000003
One of the repeated divisions of the whole organism.
One of the repeated divisions of the whole organism.[accessedResource: FBbt:00000003][accessDate: 10-05-2010]
adult segment
James Malone
Ele Holloway
CA46
James Malone
nonionic surfactants
nonionic surfactant
http://www.ebi.ac.uk/efo/EFO_0001581
A surfactant with an uncharged hydrophilic headgroup.
non ionic surfactant
James Malone
CNS - Brain - Cerebellum (MMHCC)[accessedResource: NCIt:C22609][accessDate: 10-05-2010]
Cerebellum[accessedResource: NCIt:C22609][accessDate: 10-05-2010]
James Malone
CNS - Brain - Cerebellum (MMHCC)
true
obsolete_CNS brain cerebellum MMHCC
Obsolete: No longer required in EFO
NCIt:C22609
Cerebellum
kidney derived cell line
MV4II
James Malone
Ele Holloway
lateral shoot meristem
James Malone
OntologyMappingImporter following MAT:0000225
MAT:0000225
PO:0006344
Common carotid arterial subdivision[accessedResource: FMA:70504][accessDate: 10-05-2010]
division of carotid artery
FMA:70504
Subdivision of common carotid artery
Common carotid arterial subdivision
Subdivision of common carotid artery[accessedResource: FMA:70504][accessDate: 10-05-2010]
James Malone
GM12762
James Malone
Detroit 562
Detroit562
James Malone
Ele Holloway
GeneRIF:12521993
GeneRIF:12763926
GeneRIF:12855573
GeneRIF:14565662
GeneRIF:15514014
GeneRIF:15339846
GeneRIF:15160913
GeneRIF:14687619
GeneRIF:11986957
GeneRIF:14654078
GeneRIF:12592341
Chronic lymphocytic leukemia, morphology (morphologic abnormality)
ICD9:204.1
GeneRIF:11042507
SNOMEDCT:51092000
GeneRIF:14592423
B-cell chronic lymphocytic leukemia/small lymphocytic lymphoma (morphologic abnormality)
GeneRIF:12855567
Chronic lymphocytic leukaemia
GeneRIF:12860021
Chronic lymphocytic leukemia, morphology (morphologic abnormality)[accessedResource: SNOMEDCT:51092000][accessDate: 10-05-2010]
GeneRIF:12854897
Chronic lymphocytic leukemia, B-cell type
GeneRIF:16227675
CLL - Chronic lymphocytic leukemia
Chronic lymphoid leukemia
CHR LYM LEUK W/O RMSION[accessedResource: ICD9:204.10][accessDate: 10-05-2010]
Chronic lymphocytic leukemia, B-cell type[accessedResource: SNOMEDCT:51092000][accessDate: 10-05-2010]
CLL - Chronic lymphocytic leukaemia[accessedResource: SNOMEDCT:92814006][accessDate: 10-05-2010]
Chronic lymphoid leukaemia
GeneRIF:16014560
B-cell chronic lymphocytic leukaemia/small lymphocytic lymphoma[accessedResource: SNOMEDCT:51092000][accessDate: 10-05-2010]
GeneRIF:14692527
GeneRIF:12700638
GeneRIF:12176902
GeneRIF:12127555
GeneRIF:15672409
GeneRIF:14504101
GeneRIF:14687618
GeneRIF:15621797
Chronic lymphoid leukemia, disease (disorder)
GeneRIF:12351410
Chronic lymphoid leukemia, disease[accessedResource: SNOMEDCT:92814006][accessDate: 10-05-2010]
GeneRIF:12002755
GeneRIF:12187026
Chronic lymphoid leukemia, disease (disorder)[accessedResource: SNOMEDCT:92814006][accessDate: 10-05-2010]
Chronic lymphoid leukemia without mention of remission[accessedResource: ICD9:204.10][accessDate: 10-05-2010]
GeneRIF:15809452
GeneRIF:12393534
GeneRIF:15385937
GeneRIF:15466924
GeneRIF:15325703
GeneRIF:12359369
GeneRIF:12393602
GeneRIF:12011454
GeneRIF:12454749
GeneRIF:12144536
chronic lymphocytic leukemia
ICD9:204.10
GeneRIF:12447961
Chronic lymphocytic leukaemia, B-cell type[accessedResource: SNOMEDCT:51092000][accessDate: 10-05-2010]
Chronic lymphatic leukemia[accessedResource: SNOMEDCT:51092000][accessDate: 10-05-2010]
GeneRIF:12555221
B-cell chronic lymphocytic leukemia/small lymphocytic lymphoma[accessedResource: SNOMEDCT:51092000][accessDate: 10-05-2010]
DOID:1040
Chronic lymphocytic leukaemia, B-cell type
Chronic lymphocytic leukaemia[accessedResource: SNOMEDCT:51092000][accessDate: 10-05-2010]
GeneRIF:12835724
GeneRIF:16103882
GeneRIF:15470489
GeneRIF:11836173
GeneRIF:14574328
GeneRIF:11981828
GeneRIF:15158092
GeneRIF:12480711
GeneRIF:15613544
GeneRIF:12604404
GeneRIF:12379312
GeneRIF:15471955
Chronic lymphatic leukaemia[accessedResource: SNOMEDCT:51092000][accessDate: 10-05-2010]
GeneRIF:15861184
GeneRIF:15175625
SNOMEDCT:92814006
GeneRIF:15370248
B-cell chronic lymphocytic leukemia/small lymphocytic lymphoma (morphologic abnormality)[accessedResource: SNOMEDCT:51092000][accessDate: 10-05-2010]
GeneRIF:15059847
GeneRIF:12127553
GeneRIF:12010828
GeneRIF:12857600
GeneRIF:15541476
GeneRIF:15674425
Chronic lymphatic leukemia
GeneRIF:12091354
GeneRIF:12411322
CLL - Chronic lymphocytic leukemia[accessedResource: SNOMEDCT:92814006][accessDate: 10-05-2010]
B-cell chronic lymphocytic leukemia
GeneRIF:12010662
Chronic lymphoid leukaemia[accessedResource: SNOMEDCT:51092000][accessDate: 10-05-2010]
GeneRIF:15291354
Chronic lymphoid leukaemia, disease
GeneRIF:15488762
GeneRIF:15370246
B-cell chronic lymphocytic leukaemia/small lymphocytic lymphoma
Chronic lymphoid leukemia[accessedResource: SNOMEDCT:92814006][accessDate: 10-05-2010]
GeneRIF:15927846
B-cell chronic lymphocytic leukemia/small lymphocytic lymphoma
GeneRIF:11891278
GeneRIF:11986939
GeneRIF:15182336
GeneRIF:15183896
CLL
GeneRIF:11929789
GeneRIF:14637279
Chronic lymphoid leukemia, disease
GeneRIF:11839681
GeneRIF:12931211
CLL - Chronic lymphocytic leukaemia
Chronic lymphoid leukaemia, disease[accessedResource: SNOMEDCT:92814006][accessDate: 10-05-2010]
CHR LYM LEUK W/O RMSION
Chronic lymphatic leukaemia
GeneRIF:15759031
GeneRIF:15731179
GeneRIF:12481899
GeneRIF:15591116
GeneRIF:15972449
GeneRIF:15802535
Chronic lymphoid leukemia without mention of remission
GeneRIF:14996703
GeneRIF:12595313
GeneRIF:11943260
GeneRIF:15052938
James Malone
GeneRIF:16295759
GeneRIF:12644014
GeneRIF:14689061
GeneRIF:12100030
GeneRIF:15728130
GeneRIF:12958068
GeneRIF:15284121
mating type alpha
MO_637
alpha[accessedResource: PATO:0001344][accessDate: 10-05-2010]
alpha mating type (yeast)
James Malone
alpha mating type (yeast)[accessedResource: PATO:0001344][accessDate: 10-05-2010]
A S. cerevisiae mating type cells that secrete a pheromone that stimulates a haploids.[accessedResource: PATO:0001344][accessDate: 10-05-2010]
A S. cerevisiae mating type cells that secrete a pheromone that stimulates a haploids.
alpha
PATO:0001344
Homo sapiens cell line
Human mesothelioma cell line; established from the pleural effusion of a 62-year-old Caucasian man with mesothelioma (malignant biphasic) who did not have any prior therapy.[accessedResource: BTO:0002425][accessDate: 10-05-2010]
Ele Holloway
James Malone
Human mesothelioma cell line; established from the pleural effusion of a 62-year-old Caucasian man with mesothelioma (malignant biphasic) who did not have any prior therapy.
MSTO-211H
CRL-2081
BTO:0002425
NCIt:C49190
aorta endothelium
Tomasz Adamusiak
Jie Zheng
TO:0000542
CL:0000501
A supporting cell for the developing female gamete in the ovary of mammals. They develop from the coelomic epithelial cells of the gonadal ridge. Granulosa cells form a single layer around the mammalian oocyte in the primordial ovarian follicle and advance to form a multilayered cumulus oophorus surrounding the ovum in the Graafian follicle. The major functions of granulosa cells include the production of steroids and LH receptors.
A supporting cell for the developing female gamete in the ovary of mammals. They develop from the coelomic epithelial cells of the gonadal ridge. Granulosa cells form a single layer around the mammalian oocyte in the primordial ovarian follicle and advance to form a multilayered cumulus oophorus surrounding the ovum in the Graafian follicle. The major functions of granulosa cells include the production of steroids and LH receptors.[accessedResource: CL:0000501][accessDate: 10-05-2010]
granulosa cell
MO_699
reference design
Tomasz Adamusiak
musculo-skeletal system cell
http://www.arabidopsis.org/servlets/TairObject?id=1005158684&type=germplasm
CS57660 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158684&type=germplasm
CS57660
James Malone
CHEBI:48028
[H][C@]12CCCN1C(=O)[C@H](CCCCCC(=O)C1CO1)NC(=O)[C@@H](C)NC(=O)[C@H](C)NC2=O
InChIKey=GNYCTMYOHGBSBI-SWJGNPKQDK
InChI=1/C21H32N4O6/c1-12-18(27)22-13(2)19(28)24-14(7-4-3-5-9-16(26)17-11-31-17)21(30)25-10-6-8-15(25)20(29)23-12/h12-15,17H,3-11H2,1-2H3,(H,22,27)(H,23,29)(H,24,28)/t12-,13+,14-,15+,17?/m0/s1/f/h22-24H
http://www.ebi.ac.uk/efo/EFO_0001551
HC toxin
Internal carotid artery stenosis (disorder)[accessedResource: SNOMEDCT:233964008][accessDate: 10-05-2010]
Internal carotid artery stenosis (disorder)
Tomasz Adamusiak
ICA - Internal carotid artery stenosis[accessedResource: SNOMEDCT:233964008][accessDate: 10-05-2010]
Ele Holloway
internal carotid artery stenosis
ICA - Internal carotid artery stenosis
SNOMEDCT:233964008
A usually malignant and aggressive neoplasm of the mesothelium which is often associated with exposure to asbestos.
Mesothelioma, NOS[accessedResource: DOID:2645][accessDate: 10-05-2010]
[M]Mesothelioma, unspecified (morphologic abnormality)[accessedResource: SNOMEDCT:189837000][accessDate: 10-05-2010]
Mesotheliomas
Mesothelioma, malignant (morphologic abnormality)
Mesothelioma, NOS
SNOMEDCT:62064005
SNOMEDCT:189837000
[X]Mesothelioma, unspecified (disorder)[accessedResource: SNOMEDCT:190110008][accessDate: 10-05-2010]
SNOMEDCT:190110008
Mesothelioma, unspecified (morphologic abnormality)
A tumor derived from mesothelial tissue (peritoneum, pleura, pericardium). It appears as broad sheets of cells, with some regions containing spindle-shaped, sarcoma-like cells and other regions showing adenomatous patterns. Pleural mesotheliomas have been linked to exposure to asbestos. (Dorland, 27th ed)
[M]Mesothelioma, unspecified
Mesothelioma, unspecified (disorder)[accessedResource: DOID:2645][accessDate: 10-05-2010]
GeneRIF:15705870
Mesothelioma, malignant (morphologic abnormality)[accessedResource: SNOMEDCT:62064005][accessDate: 10-05-2010]
Mesothelioma, unspecified (disorder)
GeneRIF:15900580
GeneRIF:15777968
[M]Mesothelioma, unspecified (morphologic abnormality)
A usually malignant and aggressive neoplasm of the mesothelium which is often associated with exposure to asbestos.[accessedResource: NCIt:C3234][accessDate: 10-05-2010]
GeneRIF:15996160
GeneRIF:12082623
DOID:2645
mesothelioma
GeneRIF:15334061
MSH:D008654
A tumor derived from mesothelial tissue (peritoneum, pleura, pericardium). It appears as broad sheets of cells, with some regions containing spindle-shaped, sarcoma-like cells and other regions showing adenomatous patterns. Pleural mesotheliomas have been linked to exposure to asbestos. (Dorland, 27th ed)[accessedResource: MSH:D008654][accessDate: 10-05-2010]
Mesothelioma, malignant[accessedResource: SNOMEDCT:62064005][accessDate: 10-05-2010]
James Malone
GeneRIF:12082024
Mesothelioma, malignant
GeneRIF:14729617
GeneRIF:14960305
[X]Mesothelioma, unspecified[accessedResource: SNOMEDCT:190110008][accessDate: 10-05-2010]
[X]Mesothelioma, unspecified
Mesothelioma, unspecified (morphologic abnormality)[accessedResource: DOID:2645][accessDate: 10-05-2010]
Mesotheliomas[accessedResource: MSH:D008654][accessDate: 10-05-2010]
[M]Mesothelioma, unspecified[accessedResource: SNOMEDCT:189837000][accessDate: 10-05-2010]
GeneRIF:14576363
NCIt:C3234
[X]Mesothelioma, unspecified (disorder)
GeneRIF:12839939
Obsolete: No longer required in EFO
true
NCIt:C22552
Bone Marrow (MMHCC)
obsolete_bone marrow MMHCC
James Malone
GM12234
James Malone
An individual who does some experimental process.
experiment performer
James Malone
http://en.wikipedia.org/wiki/BALB/c
NIFSTD:birnlex_206
BALB/c is a mouse strain of albion mice.
BALB/c
Tomasz Adamusiak
James Malone
Pancreatic beta -cell line of rat origin.[accessedResource: BTO:0002135][accessDate: 10-05-2010]
Jie Zheng
INS-1
MCC:0000246
Pancreatic beta -cell line of rat origin.
Tomasz Adamusiak
BTO:0002135
FBbt:00004864
The reproductive system in women includes the ovaries, the fallopian tubes, the uterus (womb), the cervix, and the vagina (birth canal).
.
EMAPA:17959
gynaecological tissue[accessedResource: BTO:0000083][accessDate: 10-05-2010]
The reproductive system in women includes the ovaries, the fallopian tubes, the uterus (womb), the cervix, and the vagina (birth canal).[accessedResource: BTO:0000083][accessDate: 10-05-2010]
Gonochoristic organism that can produce female gametes.
gynaecological tissue
EV:0100110
BTO:0000083
James Malone
EHDAA:8116
TADS:0000352
MA:0000381
Gonochoristic organism that can produce female gametes.[accessedResource: ZFA:0000303][accessDate: 10-05-2010]
female reproductive system
ZFA:0000303
FMAID:45663
XAO:0000156
.[accessedResource: FBbt:00004864][accessDate: 10-05-2010]
James Malone
HP:0000590
chronic progressive external ophthalmoplegia [Ambiguous]
PEO syndrome
chronic progressive external ophthalmoplegia[accessedResource: DOID:12558][accessDate: 10-05-2010]
PEO
progressive external ophthalmoplegia
chronic progressive external ophthalmoplegia
chronic progressive external ophthalmoplegia [Ambiguous][accessedResource: DOID:12558][accessDate: 10-05-2010]
progressive external ophthalmoplegia (disorder)[accessedResource: DOID:12558][accessDate: 10-05-2010]
Ele Holloway
DOID:12558
Progressive external ophthalmoplegia (disorder)
ZR751
James Malone
Tomasz Adamusiak
James Malone
NIFSTD:birnlex_12617
Gangliocytoma[accessedResource: NIFSTD:birnlex_12617][accessDate: 10-05-2010]
A benign neuroblastic tumor of the sympathetic nervous system that occurs in childhood. Ganglioneuroma typically arises from the sympathetic trunk in the mediastinum. Histologic features include spindle cell proliferation (resembling a neurofibroma) and the presence of large ganglion cells. Common presenting features include a palpable abdominal mass, hepatomegaly, and a thoracic mass detected on routine chest X-ray.
A benign neoplasm that usually arises from the sympathetic trunk in the mediastinum. Histologic features include spindle cell proliferation (resembling a neurofibroma) and the presence of large ganglion cells. The tumor may present clinically with HORNER SYNDROME or diarrhea due to ectopic production of vasoactive intestinal peptide (MeSH).[accessedResource: NIFSTD:birnlex_12617][accessDate: 10-05-2010]
ganglioneuroma
Ganglioneuroma (Schwannian Stroma-Dominant)[accessedResource: NCIt:C3049][accessDate: 10-05-2010]
A benign neoplasm that usually arises from the sympathetic trunk in the mediastinum. Histologic features include spindle cell proliferation (resembling a neurofibroma) and the presence of large ganglion cells. The tumor may present clinically with HORNER SYNDROME or diarrhea due to ectopic production of vasoactive intestinal peptide (MeSH).
NCIt:C3049
Gangliocytoma
A benign neuroblastic tumor of the sympathetic nervous system that occurs in childhood. Ganglioneuroma typically arises from the sympathetic trunk in the mediastinum. Histologic features include spindle cell proliferation (resembling a neurofibroma) and the presence of large ganglion cells. Common presenting features include a palpable abdominal mass, hepatomegaly, and a thoracic mass detected on routine chest X-ray.[accessedResource: NCIt:C3049][accessDate: 10-05-2010]
Ganglioneuroma (Schwannian Stroma-Dominant)
GM07357
James Malone
MA:0000289
vomeronasal organ
James Malone
A tetrahydroxyflavone that has formula C15H10O6.
http://www.ebi.ac.uk/efo/EFO_0001534
InChI=1/C15H10O6/c16-8-2-3-9-12(6-8)21-15(14(20)13(9)19)7-1-4-10(17)11(18)5-7/h1-6,16-18,20H
Oc1ccc2c(c1)oc(-c1ccc(O)c(O)c1)c(O)c2=O
2-(3,4-Dihydroxyphenyl)-3,7-dihydroxy-4H-1-benzopyran-4-one
7,3',4'-Trihydroxyflavonol
InChIKey=XHEFDIBZLJXQHF-UHFFFAOYAQ
5-Desoxyquercetin
2-(3,4-dihydroxyphenyl)-3,7-dihydroxy-4H-chromen-4-one
fisetin
3,3',4',7-Tetrahydroxyflavone
CHEBI:42567
C15H10O6
CHEBI:53439
http://www.ebi.ac.uk/efo/EFO_0002734
calcineurin
Tomasz Adamusiak
Ele Holloway
MAT:0000217
BTO:0001276
The slender tube formed by the pollen grain that penetrates an ovule and releases the male gametes.
The slender tube formed by the pollen grain that penetrates an ovule and releases the male gametes.[accessedResource: BTO:0001276][accessDate: 10-05-2010]
James Malone
pollen tube
PO:0006345
A docosenoic acid that has formula C22H42O2.
InChI=1/C12H23NO2/c1-10(2)6-13-7-11(3,4)9-15-12(13,5)14-8-10/h6-9H2,1-5H3
3,3,7,7,9a-pentamethyltetrahydro-2H,6H-[1,3]oxazino[2,3-b][1,3]oxazine
James Malone
http://www.ebi.ac.uk/efo/EFO_0001878
3,3,6,6,8a-pentamethyltetrahydro-1,8-dioxa-4a-azanaphthalene
An oxazinooxazine that has formula C12H23NO2.
(13Z)-docos-13-enoic acid
CHEBI:4836
3,3,6,6,8a-Pentamethyl-tetrahydro-1,8-dioxa-4a-aza-naphthalene
erucic acid
amphiprotic solvent
InChIKey=HXCGBGUJRISVDD-UHFFFAOYAH
3,3,6,6,8a-pentamethyl-1,8-dioxaquinolizidine
C12H23NO2
CC1(C)COC2(C)OCC(C)(C)CN2C1
SKNAS
SK-N-AS
James Malone
Ele Holloway
esophagus
AAO:0000145
The part of the stomodeum following the pharynx.
TADS:0000057
Organ with organ cavity which is continuous superiorly with the pharynx and inferiorly with the stomach. Examples: There is only one esophagus.
A muscular tube that in humans is about nine inches (23 centimeters) long and passes from the pharynx down the neck between the trachea and the spinal column and behind the left bronchus where it pierces the diaphragm slightly to the left of the middle line and joins the cardiac end of the stomach.
ZFA:0000204
EV:0100069
A muscular tube that in humans is about nine inches (23 centimeters) long and passes from the pharynx down the neck between the trachea and the spinal column and behind the left bronchus where it pierces the diaphragm slightly to the left of the middle line and joins the cardiac end of the stomach.[accessedResource: BTO:0000959][accessDate: 10-05-2010]
EHDAA:2937
James Malone
FBbt:00005381
The part of the stomodeum following the pharynx.[accessedResource: TGMA:0000134][accessDate: 10-05-2010]
FMAID:7131
MAT:0000048
oesophagus
TAO:0000204
esophagus[accessedResource: FBbt:00005381][accessDate: 10-05-2010]
Gullet
XAO:0000127
MFO:0003000
BTO:0000959
Gullet[accessedResource: FMAID:7131][accessDate: 10-05-2010]
EMAPA:16833
Organ with organ cavity which is continuous superiorly with the pharynx and inferiorly with the stomach. Examples: There is only one esophagus.[accessedResource: FMAID:7131][accessDate: 10-05-2010]
TGMA:0000134
SAEL:74
ZFS:0000014
blastula sphere
James Malone
Hematoporphyria[accessedResource: DOID:13268][accessDate: 10-05-2010]
ICD9:277.1
Disorder of porphyrin and heme metabolism
Disorder of porphyrin metabolism[accessedResource: SNOMEDCT:29094004][accessDate: 10-05-2010]
A diverse group of metabolic diseases characterized by errors in the biosynthetic pathway of HEME in the LIVER, the BONE MARROW, or both. They are classified by the deficiency of specific enzymes, the tissue site of enzyme defect, or the clinical features that include neurological (acute) or cutaneous (skin lesions). Porphyrias can be hereditary or acquired as a result of toxicity to the hepatic or erythropoietic marrow tissues.
Disorders of porphyrin metabolism[accessedResource: ICD9:277.1][accessDate: 10-05-2010]
Porphyria (disorder)[accessedResource: DOID:13268][accessDate: 10-05-2010]
disorder of porphyrin and hem metabolism
MSH:D011164
A diverse group of metabolic diseases characterized by errors in the biosynthetic pathway of HEME in the LIVER, the BONE MARROW, or both. They are classified by the deficiency of specific enzymes, the tissue site of enzyme defect, or the clinical features that include neurological (acute) or cutaneous (skin lesions). Porphyrias can be hereditary or acquired as a result of toxicity to the hepatic or erythropoietic marrow tissues.[accessedResource: MSH:D011164][accessDate: 10-05-2010]
porphyrias
Disorder of porphyrin and heme metabolism[accessedResource: SNOMEDCT:29094004][accessDate: 10-05-2010]
Disorder of porphyrin metabolism (disorder)
Porphyrinopathy[accessedResource: SNOMEDCT:371628009][accessDate: 10-05-2010]
SNOMEDCT:29094004
Disorder of porphyrin and haem metabolism[accessedResource: SNOMEDCT:29094004][accessDate: 10-05-2010]
Disorders of porphyrin metabolism
James Malone
Hematoporphyria
SNOMEDCT:190916001
SNOMEDCT:371628009
DIS PORPHYRIN METABOLISM
Porphyria NOS (disorder)
disorder of porphyrin metabolism
porphyria
Disorder of porphyrin metabolism, NOS[accessedResource: SNOMEDCT:29094004][accessDate: 10-05-2010]
disorder of porphyrin and hem metabolism[accessedResource: DOID:13268][accessDate: 10-05-2010]
Porphyrinopathy (disorder)[accessedResource: SNOMEDCT:371628009][accessDate: 10-05-2010]
Porphyrinopathy
Porphyria (disorder)
Disorder of porphyrin and haem metabolism
GeneRIF:16026339
Porphyria NOS (disorder)[accessedResource: DOID:13268][accessDate: 10-05-2010]
disorder of porphyrin metabolism (disorder)[accessedResource: DOID:13268][accessDate: 10-05-2010]
Porphyrinopathy (disorder)
Porphyria NOS
Disorder of porphyrin metabolism, NOS
DIS PORPHYRIN METABOLISM[accessedResource: ICD9:277.1][accessDate: 10-05-2010]
Porphyrias[accessedResource: MSH:D011164][accessDate: 10-05-2010]
DOID:13268
Disorders of porphyrin metabolism (disorder)
Porphyria NOS[accessedResource: SNOMEDCT:190916001][accessDate: 10-05-2010]
MO_475
software manufacturer
Tomasz Adamusiak
embryonic day 18.5
Tomasz Adamusiak
Jie Zheng
thrombocyte[accessedResource: CL:0000233][accessDate: 10-05-2010]
CL:0000233
A non-nucleated disk-shaped cell formed by extrusion from megakaryocytes, found in the blood of all mammals, and mainly involved in blood coagulation.
James Malone
platelet
blood platelet
blood platelet[accessedResource: CL:0000233][accessDate: 10-05-2010]
A non-nucleated disk-shaped cell formed by extrusion from megakaryocytes, found in the blood of all mammals, and mainly involved in blood coagulation.[accessedResource: CL:0000233][accessDate: 10-05-2010]
thrombocyte
GM11995
James Malone
5637
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158627&type=germplasm
CS57603 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158627&type=germplasm
CS57603
James Malone
MAT:0000450
James Malone
MA:0000184
basal ganglion
Tomasz Adamusiak
BTO:0000235
basal nucleus\][accessedResource: MAT:0000450][accessDate: 10-05-2010]
Set of basal ganglia[accessedResource: FMAID:84013][accessDate: 10-05-2010]
Any of four deeply placed masses of gray matter (as the amygdala) in each cerebral hemisphere. Location: The basal ganglion is located deep within the cerebral hemispheres in the telencephalon region of the brain. It consists of the corpus stratium, subthalamic nucleus and the substantia nigra.[accessedResource: BTO:0000235][accessDate: 10-05-2010]
FMAID:84013
Set of basal ganglia
Basal ganglia set[accessedResource: FMAID:84013][accessDate: 10-05-2010]
Subcortical masses of gray matter in the forebrain and midbrain that are richly interconnected and so viewed as a functional system. The nuclei usually included are the caudate nucleus (caudoputamen in rodents), putamen, globus pallidus, substantia nigra (pars compacta and pars reticulata) and the subthalamic nucleus. Some also include the nucleus accumbens and ventral pallidum.
Basal ganglia[accessedResource: FMAID:84013][accessDate: 10-05-2010]
basal nucleus
Subcortical masses of gray matter in the forebrain and midbrain that are richly interconnected and so viewed as a functional system. The nuclei usually included are the caudate nucleus (caudoputamen in rodents), putamen, globus pallidus, substantia nigra (pars compacta and pars reticulata) and the subthalamic nucleus. Some also include the nucleus accumbens and ventral pallidum.[accessedResource: NIFSTD:birnlex_826][accessDate: 10-05-2010]
Any of four deeply placed masses of gray matter (as the amygdala) in each cerebral hemisphere. Location: The basal ganglion is located deep within the cerebral hemispheres in the telencephalon region of the brain. It consists of the corpus stratium, subthalamic nucleus and the substantia nigra.
Basal ganglia set
Basal ganglia
NIFSTD:birnlex_826
Innominate artery[accessedResource: FMAID:3932][accessDate: 10-05-2010]
Brachiocephalic trunk[accessedResource: FMAID:3932][accessDate: 10-05-2010]
Brachiocephalic trunk
Innominate artery
FMAID:3932
Tomasz Adamusiak
Jie Zheng
brachiocephalic artery
T98G cell[accessedResource: BTO:0001583][accessDate: 10-05-2010]
James Malone
T-98G cell[accessedResource: BTO:0001583][accessDate: 10-05-2010]
Human, Caucasian, glioblastoma cell line.[accessedResource: BTO:0001583][accessDate: 10-05-2010]
BTO:0001583
Human, Caucasian, glioblastoma cell line.
Ele Holloway
T98G
T98G cell
T-98G cell
MCC:0000457
CL:0000586
The reproductive cell in multicellular organisms.
The reproductive cell in multicellular organisms.[accessedResource: CL:0000586][accessDate: 10-05-2010]
germ cell
Tomasz Adamusiak
Jie Zheng
HUVEC cell
Tomasz Adamusiak
HUVEC[accessedResource: BTO:0001949][accessDate: 10-05-2010]
HUVEC
A convenient source of human endothelial cells are those that line the large vein in the umbilical cord which is usually discarded together with the placenta after childbirth. The cells can be removed as a fairly pure suspension by mild enzymatic treatment of the vein followed by some mechanical distraction and will grow relatively easily in culture, retaining their differentiated characteristics for several passages.
human umbilical vein endothelial cell
A convenient source of human endothelial cells are those that line the large vein in the umbilical cord which is usually discarded together with the placenta after childbirth. The cells can be removed as a fairly pure suspension by mild enzymatic treatment of the vein followed by some mechanical distraction and will grow relatively easily in culture, retaining their differentiated characteristics for several passages.[accessedResource: BTO:0001949][accessDate: 10-05-2010]
BTO:0001949
human umbilical vein endothelial cell[accessedResource: BTO:0001949][accessDate: 10-05-2010]
NCIt:C12705
FMAID:9668
endocrine system
endocrine system
assay by molecule
2.0.1
true
Strain or line specific to mouse
obsolete_mouse strain
James Malone
consolidation of strains with organism taxon. mouse strain subclasses are moved to mus musculus subclasses
http://www.arabidopsis.org/servlets/TairObject?id=1005158782&type=germplasm
CS57758 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158782&type=germplasm
CS57758
James Malone
PO:0009046
GRO:0005367
MAT:0000231
The reproductive structure of the anthophyta or angiosperms.
flower[accessedResource: BTO:0000469][accessDate: 10-05-2010]
James Malone
flower structure
flower
GRO:0005367[accessedResource: BTO:0000469][accessDate: 10-05-2010]
The reproductive structure of the anthophyta or angiosperms.[accessedResource: BTO:0000469][accessDate: 10-05-2010]
BTO:0000469
FBbt:00005537
antennal primordium2
James Malone
GM06985
James Malone
MO_60
The photoperiod and type (e.g., natural, restricted wavelength) of light exposure.
light
Tomasz Adamusiak
Jie Zheng
James Malone
CHEBI:50842
4-chloro-5-(methylamino)-2-[3-(trifluoromethyl)phenyl]-3(2H)-pyridazinone
Zorial
C12H9ClF3N3O
Ele Holloway
Solicam
CNC1=C(Cl)C(=O)N(N=C1)c2cccc(c2)C(F)(F)F
InChIKey=NVGOPFQZYCNLDU-UHFFFAOYAZ
http://www.ebi.ac.uk/efo/EFO_0002416
InChI=1/C12H9ClF3N3O/c1-17-9-6-18-19(11(20)10(9)13)8-4-2-3-7(5-8)12(14,15)16/h2-6,17H,1H3
4-chloro-5-(methylamino)-2-(alpha,alpha,alpha-trifluoro-m-tolyl)-3(2H)-pyridazinone
A pyridazinone that has formula C12H9ClF3N3O.
SAN 9789
norflurazon
James Malone
4-chloro-5-(methylamino)-2-[3-(trifluoromethyl)phenyl]pyridazin-3(2H)-one
DMS-53
DMS53
James Malone
Ele Holloway
MO_791
Tomasz Adamusiak
A physical quality of the thermal energy of a system.
Temperature is a physical quality of the thermal energy of a system.
PATO:0000146
Jie Zheng
temperature
James Malone
A physical quality of the thermal energy of a system.[accessedResource: PATO:0000146][accessDate: 10-05-2010]
embryonic day 18
Tomasz Adamusiak
Jie Zheng
mitochondrial respiratory chain inhibitors
mitochondrial electron-transport chain inhibitor
mitochondrial electron transport chain inhibitors
http://www.ebi.ac.uk/efo/EFO_0001827
CHEBI:25355
mitochondrial respiratory-chain inhibitor
James Malone
NCIt:C32161
James Malone
AV nodal muscle tissue
AV node[accessedResource: TAO:0005070][accessDate: 10-05-2010]
Subdivision of conducting system of heart which is located in the muscular part of the interatrial septum that is continuous with the atrioventricular bundle.
MAT:0000498
A-V Node
Atrioventricular nodal muscle tissue[accessedResource: FMAID:9478][accessDate: 10-05-2010]
Node of Tawara[accessedResource: FMAID:9478][accessDate: 10-05-2010]
MA:0000095
FMAID:9478
Subdivision of conducting system of heart which is located in the muscular part of the interatrial septum that is continuous with the atrioventricular bundle.[accessedResource: FMAID:9478][accessDate: 10-05-2010]
atriovetricular node[accessedResource: TAO:0005070][accessDate: 10-05-2010]
atriovetricular node
Portion of the somite giving rise to body wall muscle masses.[accessedResource: ZFA:0000044][accessDate: 10-05-2010]
atrioventricular node
ZFA:0000044
Atrioventricular nodal muscle tissue
TAO:0005070
Aschoff-Tawara node[accessedResource: FMAID:9478][accessDate: 10-05-2010]
Portion of the somite giving rise to body wall muscle masses.
AV nodal muscle tissue[accessedResource: FMAID:9478][accessDate: 10-05-2010]
Node of Tawara
Aschoff-Tawara node
A-V Node[accessedResource: NCIt:C32161][accessDate: 10-05-2010]
AV node
Adipose Tissue (MMHCC)
true
Fatty Tissue[accessedResource: NCIt:C22703][accessDate: 10-05-2010]
obsolete_adipose tissue MMHCC
James Malone
Fatty Tissue
NCIt:C22703
Adipose Tissue (MMHCC)[accessedResource: NCIt:C22703][accessDate: 10-05-2010]
No longer required in EFO (no supporting use case)
1-isothiocyanatonaphthalene
1-naphthyl isothiocyanate
http://www.ebi.ac.uk/efo/EFO_0001469
James Malone
alpha-Naphthyl isothiocyanate
CHEBI:35455
1-Naphthylisothiocyanate
InChIKey=JBDOSUUXMYMWQH-UHFFFAOYAA
S=C=Nc1cccc2ccccc12
InChI=1/C11H7NS/c13-8-12-11-7-3-5-9-4-1-2-6-10(9)11/h1-7H
ANIT
C4H11N5
InChIKey=XZWYZXLIPXDOLR-WXQAPKLBCT
CN(C)C(=N)NC(N)=N
A guanidine that has formula C4H11N5.
metformin
CHEBI:6801
1,1-Dimethylbiguanide
N,N-dimethylimidodicarbonimidic diamide
InChI=1/C4H11N5/c1-9(2)4(7)8-3(5)6/h1-2H3,(H5,5,6,7,8)/f/h5,7-8H,6H2
http://www.ebi.ac.uk/efo/EFO_0001570
NCIt:C32446
deltoid
James Malone
267B1 Ki-ras
James Malone
CHEBI:50295
InChIKey=ZKZMDXUDDJYAIB-SUCLLAFCBT
InChI=1/C22H34O5/c1-8-20(5)12-14(24)16-21(6)11-9-10-19(3,4)17(21)15(25)18(26-13(2)23)22(16,7)27-20/h8,15-18,25H,1,9-12H2,2-7H3/t15-,16+,17-,18-,20-,21+,22-/m0/s1
C22H34O5
(3R,4aS,5S,6S,6aS,10aS,10bR)-5-(acetyloxy)-3-ethenyldodecahydro-6-hydroxy-3,4a,7,7,10a-pentamethyl-1H-naphtho(2,1-b)pyran-1-one
7beta-acetoxy-8,13-epoxy-6beta-hydroxylabd-14-en-11-one
Ele Holloway
(3R,4aS,5S,6S,6aS,10aS,10bR)-3-ethenyl-6-hydroxy-3,4a,7,7,10a-pentamethyl-1-oxododecahydro-1H-benzo[f]chromen-5-yl acetate
James Malone
(3R-(3alpha,4abeta,5beta,6beta,6aalpha,10abeta,10balpha))-5-(acetyloxy)-3-ethenyldodecahydro-6-hydroxy-3,4a,7,7,10a-pentamethyl-1H-naphtho(2,1-b)pyran-1-one
1,9-dideoxyforskolin
http://www.ebi.ac.uk/efo/EFO_0002484
A labdane diterpenoid that has formula C22H34O5.
[H][C@@]12[C@H](O)[C@H](OC(C)=O)[C@@]3(C)O[C@](C)(CC(=O)[C@]3([H])[C@@]1(C)CCCC2(C)C)C=C
IDOMAL:0000304
A developmental stage of the Plasmodium life cycle found within the erythrocyte.
A developmental stage of the Plasmodium life cycle found within the erythrocyte.[accessedResource: IDOMAL:0000304][accessDate: 10-05-2010]
trophozoite
Tomasz Adamusiak
Jie Zheng
GeneRIF:15025215
Periodontitis, NOS
NCIt:C35326
SNOMEDCT:41565005
Periodontitides
Periodontitis, NOS[accessedResource: SNOMEDCT:41565005][accessDate: 10-05-2010]
Chronic periodontitis NOS (disorder)[accessedResource: SNOMEDCT:196369002][accessDate: 10-05-2010]
DOID:824
GeneRIF:12469211
Pericementitides[accessedResource: MSH:D010518][accessDate: 10-05-2010]
GeneRIF:15845467
GeneRIF:16208406
Chronic pericementitis (disorder)
GeneRIF:12595898
NCIt:C34918
James Malone
chronic periodontitis (disorder)[accessedResource: DOID:824][accessDate: 10-05-2010]
SNOMEDCT:196369002
GeneRIF:15974847
GeneRIF:14734770
Periodontitis (disorder)[accessedResource: DOID:824][accessDate: 10-05-2010]
Chronic periodontitis NOS[accessedResource: SNOMEDCT:196369002][accessDate: 10-05-2010]
GeneRIF:15312099
ICD9:523.4
GeneRIF:11846846
chronic periodontitis (disorder)
MSH:D010518
chronic periodontitis NOS (disorder)
chronic Periodontitis
GeneRIF:15491310
SNOMEDCT:196365008
SNOMEDCT:5689008
GeneRIF:12834496
chronic pericementitis (disorder)[accessedResource: DOID:824][accessDate: 10-05-2010]
Chronic periodontitis NOS
Pericementitides
Chronic periodontitis[accessedResource: SNOMEDCT:5689008][accessDate: 10-05-2010]
GeneRIF:12795790
Pericementitis[accessedResource: MSH:D010518][accessDate: 10-05-2010]
Inflammation and loss of connective tissues supporting or surrounding the teeth. This may involve any part of the PERIODONTIUM. Periodontitis is currently classified by disease progression (CHRONIC PERIODONTITIS; AGGRESSIVE PERIODONTITIS) instead of age of onset. (From 1999 International Workshop for a Classification of Periodontal Diseases and Conditions, American Academy of Periodontology)
Chronic pericementitis[accessedResource: SNOMEDCT:196365008][accessDate: 10-05-2010]
GeneRIF:15279649
periodontitis
Periodontitis (disorder)
GeneRIF:16052575
GeneRIF:12370398
chronic pericementitis
GeneRIF:12759451
GeneRIF:16018746
Inflammation and loss of connective tissues supporting or surrounding the teeth. This may involve any part of the PERIODONTIUM. Periodontitis is currently classified by disease progression (CHRONIC PERIODONTITIS; AGGRESSIVE PERIODONTITIS) instead of age of onset. (From 1999 International Workshop for a Classification of Periodontal Diseases and Conditions, American Academy of Periodontology)[accessedResource: MSH:D010518][accessDate: 10-05-2010]
Pericementitis
GeneRIF:12747454
Periodontitides[accessedResource: MSH:D010518][accessDate: 10-05-2010]
PO:0020019
MAT:0000214
megaspore
OntologyMappingImporter following MAT:0000214
James Malone
A class of large neuroglial (macroglial) cells in the central nervous system - the largest and most numerous neuroglial cells in the brain and spinal cord. Astrocytes (from "star" cells) are irregularly shaped with many long processes, including those with "end feet" which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and "reactive astrocytes" (along with microglia) respond to injury (MSH).
astrocyte
Tomasz Adamusiak
James Malone
NIFSTD:sao1394521419
A class of large neuroglial (macroglial) cells in the central nervous system - the largest and most numerous neuroglial cells in the brain and spinal cord. Astrocytes (from 'star' cells) are irregularly shaped with many long processes, including those with 'end feet' which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and 'reactive astrocytes' (along with microglia) respond to injury.
A class of large neuroglial (macroglial) cells in the central nervous system - the largest and most numerous neuroglial cells in the brain and spinal cord. Astrocytes (from 'star' cells) are irregularly shaped with many long processes, including those with 'end feet' which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and 'reactive astrocytes' (along with microglia) respond to injury.[accessedResource: CL:0000127][accessDate: 10-05-2010]
A class of large neuroglial (macroglial) cells in the central nervous system - the largest and most numerous neuroglial cells in the brain and spinal cord. Astrocytes (from "star" cells) are irregularly shaped with many long processes, including those with "end feet" which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and "reactive astrocytes" (along with microglia) respond to injury (MSH).[accessedResource: NIFSTD:sao1394521419][accessDate: 10-05-2010]
CL:0000127
Malme3M
James Malone
Ele Holloway
COLO201
James Malone
Ele Holloway
A malignant cystic serous or mucinous epithelial neoplasm characterized by the presence of malignant glandular epithelial cells forming papillary structures. Stromal invasion is present.[accessedResource: NCIt:C3777][accessDate: 10-05-2010]
[M]Papillary cystadenocarcinoma, NOS
Papillocystic adenocarcinoma
Papillary cystadenocarcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:2735009][accessDate: 10-05-2010]
Cystadenocarcinomas, Papillary[accessedResource: MSH:D018283][accessDate: 10-05-2010]
GeneRIF:12911720
Papillary cystadenocarcinoma, NOS[accessedResource: SNOMEDCT:2735009][accessDate: 10-05-2010]
An adenocarcinoma in which the tumor elements are arranged as finger-like processes or as a solid spherical nodule projecting from an epithelial surface.[accessedResource: MSH:D018283][accessDate: 10-05-2010]
[M]Papillary cystadenocarcinoma, NOS (morphologic abnormality)
Papillary cystadenocarcinoma, NOS
NCIt:C3777
Papillary cystadenocarcinoma (morphologic abnormality)
[M]Papillary cystadenocarcinoma, NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189687009][accessDate: 10-05-2010]
SNOMEDCT:189687009
MSH:D018283
SNOMEDCT:2735009
Papillary cystadenocarcinoma, NOS (morphologic abnormality)
Papillocystic adenocarcinoma[accessedResource: SNOMEDCT:2735009][accessDate: 10-05-2010]
An adenocarcinoma in which the tumor elements are arranged as finger-like processes or as a solid spherical nodule projecting from an epithelial surface.
Papillary cystadenocarcinoma, NOS (morphologic abnormality)[accessedResource: DOID:3110][accessDate: 10-05-2010]
A malignant cystic serous or mucinous epithelial neoplasm characterized by the presence of malignant glandular epithelial cells forming papillary structures. Stromal invasion is present.
Papillary Cystadenocarcinomas
DOID:3110
James Malone
[M]Papillary cystadenocarcinoma, NOS[accessedResource: SNOMEDCT:189687009][accessDate: 10-05-2010]
papillary cystadenocarcinoma
NHA
Normal Human Astrocytes
NHA is a cell line derived from normal (healthy) human astrocyte cells.
James Malone
A carbon group element atom that has formula Si.
silicio
silicon atom
InChI=1/Si
Jie Zheng
A carbon group element that has formula Si.
James Malone
Ele Holloway
InChIKey=XUIMIQQOPSSXEZ-UHFFFAOYAB
[Si]
silicon
Silizium
14Si
http://www.ebi.ac.uk/efo/EFO_0002420
Tomasz Adamusiak
MO_382
silicium
zebrafish
http://www.ebi.ac.uk/efo/EFO_0002639
Danio rerio
James Malone
Vagus nerve nodose ganglion[accessedResource: FMA:6230][accessDate: 10-05-2010]
Nodose ganglion
Inferior ganglion of vagus[accessedResource: FMA:6230][accessDate: 10-05-2010]
Ganglion inferius (Nervus vagus)
Ganglion inferius (Nervus vagus)[accessedResource: FMA:6230][accessDate: 10-05-2010]
FMA:6230
Tenth cranial nerve nodose ganglion
James Malone
Ele Holloway
Vagus nerve nodose ganglion
Tenth cranial nerve nodose ganglion[accessedResource: FMA:6230][accessDate: 10-05-2010]
Vagus nerve inferior ganglion
Nodose ganglion[accessedResource: FMA:6230][accessDate: 10-05-2010]
Inferior ganglion of vagus
Vagus nerve inferior ganglion[accessedResource: FMA:6230][accessDate: 10-05-2010]
inferior ganglion of vagus nerve
leaf's response to physical damage by a caterpillar on a plant leaf
Physiological response to e.g. leaf's response to physical damage by a caterpillar on a plant leaf
damage response
James Malone
TH-2
murine neuroblastoma cholinergic cell line
InChIKey=RZEKVGVHFLEQIL-QVUQFMIFCW
4-[5-(4-methylphenyl)-3-(trifluoromethyl)-1H-pyrazol-1-yl]benzenesulfonamide
p-(5-p-Tolyl-3-(trifluoromethyl)pyrazol-1-yl)benzenesulfonamide
celecoxib
CHEBI:41423
James Malone
http://www.ebi.ac.uk/efo/EFO_0001501
A pyrazole that has formula C17H14F3N3O2S.
Celebrex (TN)
InChI=1/C17H14F3N3O2S/c1-11-2-4-12(5-3-11)15-10-16(17(18,19)20)22-23(15)13-6-8-14(9-7-13)26(21,24)25/h2-10H,1H3,(H2,21,24,25)/f/h21H2
C17H14F3N3O2S
Cc1ccc(cc1)-c1cc(nn1-c1ccc(cc1)S(N)(=O)=O)C(F)(F)F
SNOMEDCT:200996000
Psoriasis and similar disorders NOS (disorder)
Other psoriasis and similar disorders excluding psoriatic arthropathy[accessedResource: ICD9:696.1][accessDate: 10-05-2010]
SNOMEDCT:200955003
James Malone
Psoriasis and similar disorders[accessedResource: SNOMEDCT:200955003][accessDate: 10-05-2010]
ICD9:696
psoriasis
Psoriasis and similar disorders (navigational concept)
Psoriasis and similar disorders NOS (disorder)[accessedResource: SNOMEDCT:200997009][accessDate: 10-05-2010]
Other psoriasis and similar disorders
Other psoriasis and similar disorders (disorder)[accessedResource: SNOMEDCT:200996000][accessDate: 10-05-2010]
PITYRIASIS NEC & NOS[accessedResource: ICD9:696.5][accessDate: 10-05-2010]
OTHER PSORIASIS[accessedResource: ICD9:696.1][accessDate: 10-05-2010]
ICD9:696.1
OTHER PSORIASIS
Psoriasis and similar disorders (navigational concept)[accessedResource: SNOMEDCT:200955003][accessDate: 10-05-2010]
Other and unspecified pityriasis[accessedResource: ICD9:696.5][accessDate: 10-05-2010]
Psoriasis and similar disorders NOS[accessedResource: SNOMEDCT:200997009][accessDate: 10-05-2010]
Other psoriasis and similar disorders excluding psoriatic arthropathy
SNOMEDCT:200997009
ICD9:696.8
Other and unspecified pityriasis
Other psoriasis and similar disorders (disorder)
Psoriasis and similar disorders (disorder)
DOID:8893
ICD9:696.5
Psoriasis and similar disorders
Psoriasis and similar disorders NOS
Other psoriasis and similar disorders[accessedResource: SNOMEDCT:200996000][accessDate: 10-05-2010]
PSORIAS RELATED DIS NEC
PITYRIASIS NEC & NOS
Psoriasis and similar disorders (disorder)[accessedResource: SNOMEDCT:200955003][accessDate: 10-05-2010]
PSORIAS RELATED DIS NEC[accessedResource: ICD9:696.8][accessDate: 10-05-2010]
L428
James Malone
Ele Holloway
COLO668
James Malone
Ele Holloway
NCIH1436
James Malone
Ele Holloway
FBbt:00005663
embryonic central brain glia
James Malone
FMA:22532
tibialis anterior muscle
James Malone
XAO:0003033
SAEL:72
AAO:0000334
MFO:0003640
Any sense organ (FBbt:00005155) that has function 'detection of chemical stimulus involved in sensory perception (GO:0050907)'.
1a: The part of the face that bears the nostrils and covers the anterior part of the nasal cavity; broadly: this part together with the nasal cavity.nb: The anterior part of the head at the top or end of the muzzle: snout, proboscis.n2. The vertebrate olfactory organ.[accessedResource: BTO:0000840][accessDate: 10-05-2010]
FBbt:00005157
EMAPA:16542
TAO:0001149
1a: The part of the face that bears the nostrils and covers the anterior part of the nasal cavity; broadly: this part together with the nasal cavity.nb: The anterior part of the head at the top or end of the muzzle: snout, proboscis.n2. The vertebrate olfactory organ.
Any sense organ (FBbt:00005155) that functions in (some) detection of chemical stimulus involved in sensory perception (GO:0050907).[accessedResource: FBbt:00005157][accessDate: 10-05-2010]
FMAID:46472
BTO:0000840
EHDAA:1502
nose structure
EV:0100037
James Malone
nose
ZFA:0001149
Any sense organ (FBbt:00005155) that functions in (some) detection of chemical stimulus involved in sensory perception (GO:0050907).
*Subdivision of face which consists of the nasal skeleton, nasal septum and nasal cavity.[accessedResource: FMAID:46472][accessDate: 10-05-2010]
*Subdivision of face which consists of the nasal skeleton, nasal septum and nasal cavity.
XAO:0000201
MA:0000281
Sclerocorneal junction[accessedResource: FMA:58342][accessDate: 10-05-2010]
Corneoscleral junction[accessedResource: FMA:58342][accessDate: 10-05-2010]
Corneoscleral Limbus
Corneoscleral junction
FMA:58342
James Malone
Limbus of cornea
corneal limbus
Limbus of cornea[accessedResource: FMA:58342][accessDate: 10-05-2010]
Corneoscleral Limbus[accessedResource: NCIt:C12823][accessDate: 10-05-2010]
Sclerocorneal junction
NCIt:C12823
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#International_Unit_of_Biological_Activity
MO_1011
International Unit
James Malone
true
A unit of molarity which is equal to one thousandth of one millionth of a molar or 10^[-9] M.
James Malone
Jie Zheng
nM
http://www.ebi.ac.uk/efo/EFO_0001812
MO_862
nanomolar
Tomasz Adamusiak
Eukaryota
Eucaryotae
Tomasz Adamusiak
Eukarya[accessedResource: NIFSTD:birnlex_399][accessDate: 10-05-2010]
eucaryotes[accessedResource: NIFSTD:birnlex_399][accessDate: 10-05-2010]
http://www.ebi.ac.uk/efo/EFO_0001449
NIFSTD:birnlex_399
eucaryotes
Eucaryotae[accessedResource: NIFSTD:birnlex_399][accessDate: 10-05-2010]
Eukarya
James Malone
nervous system cell
HCC1937
James Malone
CL:0000023
oocyte
Tomasz Adamusiak
James Malone
SAEL:36
BTO:0000408
MA:0000397
epididymus
A system of ductules emerging posteriorly from the testis that holds sperm during maturation and that forms a tangled mass before uniting into a single coiled duct which is continuous with the vas deferens.[accessedResource: BTO:0000408][accessDate: 10-05-2010]
EV:0100103
MAT:0000130
A system of ductules emerging posteriorly from the testis that holds sperm during maturation and that forms a tangled mass before uniting into a single coiled duct which is continuous with the vas deferens.
FMAID:18255
EMAPA:19290
1.5
obsolete - duplication with T cell acute lymphoblastic
leukemia EFO_0000209 use this instead
true
obsolete_precursor T lymphoblastic leukemia
James Malone
An assay in which the transcriptome of a biological sample is analysed by reverse transcription PCR (RT-PCR)
transcription profiling by RT-PCR
Anna Farne
SKUT1
James Malone
Ele Holloway
1.8
true
obsolete_Wi38
James Malone
Ele Holloway
Duplicate use EFO_0001260
CL:0000151
secretory cell
Tomasz Adamusiak
embryo late (growth) stage
EVM:2990031
embryo late (growth) stage[accessedResource: MAT:0000399][accessDate: 10-05-2010]
fetus
MAT:0000399
FBdv:0005333
James Malone
EV:0300011
SW1417
James Malone
Ele Holloway
JAX:100007
CB6F1 is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/100007.html
CB6F1
James Malone
A thin, transparent tissue divided into the palpebral conjunctiva (covering the inner side of the eye lid) and the bulbar conjunctiva (covering the eyeball).
A thin, transparent tissue divided into the palpebral conjunctiva (covering the inner side of the eye lid) and the bulbar conjunctiva (covering the eyeball).[accessedResource: NCIt:C12341][accessDate: 10-05-2010]
conjunctiva
James Malone
conjunctiva structure
NCIt:C12341
http://jaxmice.jax.org/strain/009291.html
ILSXISS110/TejJ
Tomasz Adamusiak
GeneRIF:14523459
GeneRIF:15213099
Myeloid Leukemia, Philadelphia-Positive
GeneRIF:11937267
GeneRIF:12576428
Leukemia, Myelogenous, Ph1-Positive
Clonal hematopoetic disorder caused by an acquired genetic defect in PLURIPOTENT STEM CELLS. It starts in MYELOID CELLS of the bone marrow, invades the blood and then other organs. The condition progresses from a stable, more indolent, chronic phase (LEUKEMIA, MYELOID, CHRONIC PHASE) lasting up to 7 years, to an advanced phase composed of an accelerated phase (LEUKEMIA, MYELOID, ACCELERATED PHASE) and BLAST CRISIS.
LEUKEMIA PHILA POS[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Leukemias, Chronic Myeloid
CML in Remission[accessedResource: DOID:8552][accessDate: 10-05-2010]
ICD9:205.1
chronic myeloid leukemia, disease (disorder)
GeneRIF:15790787
GeneRIF:12351404
chronic myeloid leukemia NOS (disorder)[accessedResource: DOID:8552][accessDate: 10-05-2010]
CML[accessedResource: DOID:8552][accessDate: 10-05-2010]
GeneRIF:12734675
chronic myeloid leukemia in remission (disorder)[accessedResource: DOID:8552][accessDate: 10-05-2010]
GeneRIF:15716990
Myeloid Leukemias, Philadelphia-Positive
chronic myeloid leukemia in remission[accessedResource: DOID:8552][accessDate: 10-05-2010]
chronic myeloid leukemia without mention of remission
GeneRIF:15676212
chronic myeloid leukaemia
Leukemias, Ph1-Positive Myeloid[accessedResource: MSH:D015464][accessDate: 10-05-2010]
MSH:D015464
Leukemia, Ph1-Positive Myelogenous[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:12821944
GeneRIF:15556610
chronic myelogenous leukemia, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:8552][accessDate: 10-05-2010]
GeneRIF:12130516
Myelogenous Leukemias, Chronic[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:15481444
Clonal hematopoetic disorder caused by an acquired genetic defect in PLURIPOTENT STEM CELLS. It starts in MYELOID CELLS of the bone marrow, invades the blood and then other organs. The condition progresses from a stable, more indolent, chronic phase (LEUKEMIA, MYELOID, CHRONIC PHASE) lasting up to 7 years, to an advanced phase composed of an accelerated phase (LEUKEMIA, MYELOID, ACCELERATED PHASE) and BLAST CRISIS.[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:15583852
chronic myeloid leukemia in remission (disorder)
Leukemia, Myelogenous, Chronic, BCR-ABL Positive
GeneRIF:12505259
GeneRIF:14656881
Obsolete: Duplication: use EFO_0000339 instead
Myeloid Leukemia, chronic[accessedResource: DOID:8552][accessDate: 10-05-2010]
CML
Leukemia, Myelogenous, Chronic, BCR-ABL Positive[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Leukemia, Chronic Granulocytic[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:12144533
Myelogenous Leukemias, Ph1-Positive
Ph1-Positive Myeloid Leukemias
GeneRIF:15388581
chronic myeloid leukaemia[accessedResource: DOID:8552][accessDate: 10-05-2010]
chronic myelogenous leukemia, no ICD-O subtype (morphologic abnormality)
Leukemia, Myeloid, Ph1 Positive
true
Leukemia, Myeloid, Ph1 Positive[accessedResource: MSH:D015464][accessDate: 10-05-2010]
CML - chronic Myelogenous Leukemia
Chronic Granulocytic Leukemia
CML - chronic Myelogenous Leukemia[accessedResource: DOID:8552][accessDate: 10-05-2010]
Myelogenous Leukemias, Ph1-Positive[accessedResource: MSH:D015464][accessDate: 10-05-2010]
chronic myeloid leukemia in remission
chronic myeloid leukemia, disease (disorder)[accessedResource: DOID:8552][accessDate: 10-05-2010]
GeneRIF:15735728
CML in Remission
GeneRIF:11830496
GeneRIF:11861294
Chronic Myelocytic Leukemias
GeneRIF:12393722
GeneRIF:15167915
Myelogenous Leukemia, Chronic
GeneRIF:16361542
James Malone
GeneRIF:12576338
Leukemias, Philadelphia-Positive Myeloid[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:15621754
chronic myeloid leukemia NOS (disorder)
Leukemia, Myelogenous, Chronic[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Leukemias, Chronic Myelocytic[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:12964051
Myeloid Leukemia, Chronic
GeneRIF:15569990
Granulocytic Leukemias, Chronic
Chronic Granulocytic Leukemias[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Leukemia, Myeloid, Philadelphia Positive[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Chronic Myelocytic Leukemia[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:12408765
DOID:8552
obsolete_chronic myeloid leukemia
GeneRIF:15626746
GeneRIF:12740446
chronic myeloid leukemia without mention of remission[accessedResource: DOID:8552][accessDate: 10-05-2010]
Myelogenous Leukemias, Chronic
LEUKEMIA PHILA POS
Chronic Myeloid Leukemias[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Leukemia, Myelocytic, Chronic
GeneRIF:14586403
GeneRIF:12594292
Infections, HTLV-III-LAV[accessedResource: MSH:D015658][accessDate: 10-05-2010]
GeneRIF:14502291
GeneRIF:15556689
GeneRIF:12482395
GeneRIF:12900520
HTLV-III-LAV Infection[accessedResource: MSH:D015658][accessDate: 10-05-2010]
GeneRIF:12514416
GeneRIF:15057492
GeneRIF:15018667
GeneRIF:12713059
HIV - Human immunodeficiency virus infection[accessedResource: SNOMEDCT:86406008][accessDate: 10-05-2010]
GeneRIF:12964117
GeneRIF:15735450
HTLV III INFECT[accessedResource: MSH:D015658][accessDate: 10-05-2010]
GeneRIF:12468426
GeneRIF:15829920
GeneRIF:12639247
Infection, HIV
GeneRIF:15741250
GeneRIF:11834941
GeneRIF:12131187
Human immunodeficiency virus disease (disorder)[accessedResource: DOID:526][accessDate: 10-05-2010]
GeneRIF:14501804
SNOMEDCT:86406008
GeneRIF:15452260
Infections, HIV
MSH:D015658
Human immunodeficiency virus disease
GeneRIF:15869407
GeneRIF:12803993
GeneRIF:11983108
GeneRIF:15564514
Human immunodeficiency virus infection (disorder)[accessedResource: SNOMEDCT:86406008][accessDate: 10-05-2010]
GeneRIF:12767990
HUMAN IMMUNO VIRUS DIS[accessedResource: ICD9:042][accessDate: 10-05-2010]
GeneRIF:14984591
An infection caused by the human immunodeficiency virus.
Human immunodeficiency virus disease[accessedResource: DOID:526][accessDate: 10-05-2010]
T LYMPHOTROPIC VIRUS TYPE III INFECT HUMAN
GeneRIF:16284526
LYMPHOTROPIC VIRUS TYPE III INFECTIONS HUMAN T[accessedResource: MSH:D015658][accessDate: 10-05-2010]
GeneRIF:12510154
GeneRIF:15297876
GeneRIF:11466339
Includes the spectrum of human immunodeficiency virus infections that range from asymptomatic seropositivity, thru AIDS-related complex (ARC), to acquired immunodeficiency syndrome (AIDS).[accessedResource: MSH:D015658][accessDate: 10-05-2010]
Human immunodeficiency virus infection (disorder)
GeneRIF:12751031
GeneRIF:12531788
GeneRIF:12610138
GeneRIF:12586555
GeneRIF:12640191
NCIt:C3108
GeneRIF:15555533
GeneRIF:15708596
GeneRIF:12847229
GeneRIF:15864119
[X]Human immunodeficiency virus disease (disorder)[accessedResource: SNOMEDCT:187438009][accessDate: 10-05-2010]
GeneRIF:15319853
Human immunodeficiency virus infection
HIV INFECT[accessedResource: MSH:D015658][accessDate: 10-05-2010]
SNOMEDCT:187453001
GeneRIF:15702055
GeneRIF:14978126
GeneRIF:12884293
[X]Unspecified human immunodeficiency virus [HIV] disease
Includes the spectrum of human immunodeficiency virus infections that range from asymptomatic seropositivity, thru AIDS-related complex (ARC), to acquired immunodeficiency syndrome (AIDS).
Human immunodeficiency virus infection, NOS[accessedResource: SNOMEDCT:86406008][accessDate: 10-05-2010]
HTLV-III Infections[accessedResource: MSH:D015658][accessDate: 10-05-2010]
Infection, HIV[accessedResource: MSH:D015658][accessDate: 10-05-2010]
GeneRIF:15661918
HTLV III LAV INFECT
HIV
GeneRIF:15879099
Unspecified human immunodeficiency virus [HIV] disease (disorder)
HTLV WIII LAV INFECTIONS
GeneRIF:11862398
T-Lymphotropic Virus Type III Infections, Human
GeneRIF:15660419
GeneRIF:12645627
ICD9:042
GeneRIF:15737629
[X]Human immunodeficiency virus disease (disorder)
GeneRIF:12815099
Human immunodeficiency virus [HIV] disease[accessedResource: ICD9:042][accessDate: 10-05-2010]
HTLV-III Infection
GeneRIF:12513914
GeneRIF:15242539
HTLV-III Infection[accessedResource: MSH:D015658][accessDate: 10-05-2010]
GeneRIF:12202149
GeneRIF:15585099
HIV infectious disease
GeneRIF:15326605
GeneRIF:15985194
GeneRIF:16156786
GeneRIF:15751767
GeneRIF:12193696
HUMAN IMMUNODEFICIENCY VIRUS [HIV] INFECTION
HIV infectious disease[accessedResource: DOID:526][accessDate: 10-05-2010]
GeneRIF:12167863
GeneRIF:15535131
GeneRIF:15596839
GeneRIF:11801693
human immunodeficiency virus
GeneRIF:15541354
James Malone
GeneRIF:16136472
GeneRIF:12834106
GeneRIF:14501803
GeneRIF:15272203
GeneRIF:12769187
GeneRIF:14764743
HTLV WIII LAV INFECTIONS[accessedResource: MSH:D015658][accessDate: 10-05-2010]
GeneRIF:12515722
GeneRIF:14645006
GeneRIF:14687494
GeneRIF:11466389
GeneRIF:14554087
GeneRIF:12639246
GeneRIF:15265023
GeneRIF:12960279
GeneRIF:11861282
GeneRIF:12100031
GeneRIF:12473840
HIV INFECT
GeneRIF:11709782
GeneRIF:11932418
GeneRIF:12192009
GeneRIF:15466648
Unspecified human immunodeficiency virus [HIV] disease (disorder)[accessedResource: DOID:526][accessDate: 10-05-2010]
GeneRIF:12829794
HUMAN IMMUNO VIRUS DIS
[X]Unspecified human immunodeficiency virus [HIV] disease (disorder)
GeneRIF:15128805
T LYMPHOTROPIC VIRUS TYPE III INFECT HUMAN[accessedResource: MSH:D015658][accessDate: 10-05-2010]
GeneRIF:12619446
GeneRIF:12237292
GeneRIF:12220649
GeneRIF:16015368
An infection caused by the human immunodeficiency virus.[accessedResource: NCIt:C3108][accessDate: 10-05-2010]
GeneRIF:14688346
GeneRIF:12427285
Infections, HTLV-III-LAV
GeneRIF:12767998
HTLV III LAV INFECT[accessedResource: MSH:D015658][accessDate: 10-05-2010]
SNOMEDCT:187438009
HTLV-III-LAV Infection
DOID:526
GeneRIF:12679439
GeneRIF:14985764
Human immunodeficiency virus disease (disorder)
ICD9:042-042.99
GeneRIF:14983032
GeneRIF:12051740
GeneRIF:11937573
Human immunodeficiency virus infection, NOS
Human immunodeficiency virus infection[accessedResource: DOID:526][accessDate: 10-05-2010]
[X]Human immunodeficiency virus disease[accessedResource: SNOMEDCT:187438009][accessDate: 10-05-2010]
GeneRIF:15175077
Human immunodeficiency virus [HIV] disease
HTLV WIII INFECTIONS
HTLV III Infections
GeneRIF:15181567
[X]Unspecified human immunodeficiency virus [HIV] disease[accessedResource: SNOMEDCT:187453001][accessDate: 10-05-2010]
GeneRIF:12368356
GeneRIF:15192272
GeneRIF:12552446
GeneRIF:16081817
HTLV WIII INFECTIONS[accessedResource: MSH:D015658][accessDate: 10-05-2010]
GeneRIF:15117454
GeneRIF:15821887
GeneRIF:12757260
GeneRIF:15156567
Infections, HIV[accessedResource: MSH:D015658][accessDate: 10-05-2010]
[X]Human immunodeficiency virus disease
HTLV III INFECT
[X]Unspecified human immunodeficiency virus [HIV] disease (disorder)[accessedResource: SNOMEDCT:187453001][accessDate: 10-05-2010]
"Rattus sp. strain Wistar"
Rattus norvegicus
Rattus norvegicus, commonly Brown or Norway rat, is a rat strain as described in http://www.informatics.jax.org/external/festing/rat/docs/BN.shtml
"Gunn rats"
"Norway rat"
http://www.informatics.jax.org/external/festing/rat/docs/BN.shtml
James Malone
BN
"rat"
http://www.ebi.ac.uk/efo/EFO_0000104
brown rat
"Rattus norvegicus8"
"Rattus norwegicus"
"rats"
"Rattus rattiscus"
common rat
Delta(1)-dehydrocortisol
(11beta)-11,17,21-trihydroxypregna-1,4-diene-3,20-dione
CHEBI:8378
InChI=1/C21H28O5/c1-19-7-5-13(23)9-12(19)3-4-14-15-6-8-21(26,17(25)11-22)20(15,2)10-16(24)18(14)19/h5,7,9,14-16,18,22,24,26H,3-4,6,8,10-11H2,1-2H3/t14-,15-,16-,18+,19-,20-,21-/m0/s1
hydroretrocortine
A glucocorticoid that has formula C21H28O5.
Delta(1)-dehydrohydrocortisone
11beta,17,21-trihydroxypregna-1,4-diene-3,20-dione
InChIKey=OIGNJSKKLXVSLS-VWUMJDOOBF
[H][C@@]12CCC3=CC(=O)C=C[C@]3(C)[C@@]1([H])[C@@H](O)C[C@@]1(C)[C@@]2([H])CC[C@]1(O)C(=O)CO
C21H28O5
http://www.ebi.ac.uk/efo/EFO_0001595
3,20-dioxo-11beta,17alpha,21-trihydroxy-1,4-pregnadiene
Delta(1)-hydrocortisone
metacortandralone
1,4-pregnadiene-3,20-dione-11beta,17alpha,21-triol
prednisolone
ZFS:0000005
cleavage 16-cell
James Malone
GATA-1-null erythroblast cell line
G1E
A GATA-1-null erythroblast is a cell line.
A g1e er4 is a GATA-1-null erythroblast.
Natural Language Generator 8th April 2010
Calu1
James Malone
Calu-1
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0001791
true
James Malone
A minute is a derived time unit which is equal to 60 seconds.
min
UO:0000031
minute
A time unit which is equal to 60 seconds.
Location of cancer, primary or metastatic
Jie Zheng
James Malone
cancer site
MO_26
This will be obsoleted in near future.
Tomasz Adamusiak
NCIH2009
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158734&type=germplasm
CS57710 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158734&type=germplasm
CS57710
James Malone
BTO:0001265
A broad flat muscle of the calf of the leg lying immediately below the gastrocnemius.
A broad flat muscle of the calf of the leg lying immediately below the gastrocnemius.[accessedResource: BTO:0001265][accessDate: 10-05-2010]
soleus muscle
James Malone
ZFS:0000009
blastula 256-cell
James Malone
red junglefowl
chicken
http://www.ebi.ac.uk/efo/EFO_0002640
Gallus gallus
James Malone
Shoulder girdle[accessedResource: FMAID:23217][accessDate: 10-05-2010]
Subdivision of free upper limb, which is the proximal segment of an upper limb and links the free upper limb to the trunk; it is demarcated by the plane of the surface of the glenoid fossa from the free upper limb; together with the free upper limb, it constitutes the upper limb. Examples: There are only two instances, right and left pectoral girdles.
Subdivision of free upper limb, which is the proximal segment of an upper limb and links the free upper limb to the trunk; it is demarcated by the plane of the surface of the glenoid fossa from the free upper limb; together with the free upper limb, it constitutes the upper limb. Examples: There are only two instances, right and left pectoral girdles.[accessedResource: FMAID:23217][accessDate: 10-05-2010]
shoulder bones[accessedResource: MAT:0000181][accessDate: 10-05-2010]
MA:0000292
Upper limb girdle
Upper limb girdle[accessedResource: FMAID:23217][accessDate: 10-05-2010]
James Malone
Shoulder girdle
FMAID:23217
MAT:0000181
shoulder bones
pectoral girdle
EMAPA:18025
EHDAA:6039
ZFS:0000029
pharyngula prim-5
James Malone
true
obsolete_clinical information
chromium atom
InChI=1/Cr
http://www.ebi.ac.uk/efo/EFO_0001505
Chrom
A chromium group element atom that has formula Cr.
cromo
[Cr]
InChIKey=VYZAMTAEIAYCRO-UHFFFAOYAB
24Cr
CHEBI:28073
A chromium group element that has formula Cr.
chromium
James Malone
chrome
Transudate contained in the lumen of lymphatic vessel.[accessedResource: FMAID:9671][accessDate: 10-05-2010]
FMAID:9671
James Malone
EV:0100049
Transudate contained in the lumen of lymphatic vessel.
BTO:0000855
A clear, watery, sometimes faintly yellowish fluid derived from body tissues that contains white blood cells and circulates throughout the lymphatic system, returning to the venous bloodstream through the thoracic duct. Lymph acts to remove bacteria and certain proteins from the tissues, transport fat from the small intestine, and supply mature lymphocytes to the blood.
MAT:0000055
A clear, watery, sometimes faintly yellowish fluid derived from body tissues that contains white blood cells and circulates throughout the lymphatic system, returning to the venous bloodstream through the thoracic duct. Lymph acts to remove bacteria and certain proteins from the tissues, transport fat from the small intestine, and supply mature lymphocytes to the blood.[accessedResource: BTO:0000855][accessDate: 10-05-2010]
lymph
MA:0002520
EV:0100072
MA:0000337
FMAID:14544
SAEL:96
The terminal region of the mid intestine is comprised of specialized enterocytes that appear to play a role in mucosal immunity.
The part of the intestine that lies between the stomach and colon, consists of duodenum, jejunum, and ileum, secretes digestive enzymes, and is the chief site of the absorption of digested nutrients. The proximal portion of the intestine.
intestinum tenue
mid intestine[accessedResource: MAT:0000047][accessDate: 10-05-2010]
The terminal region of the mid intestine is comprised of specialized enterocytes that appear to play a role in mucosal immunity.[accessedResource: ZFA:0001323][accessDate: 10-05-2010]
The anterior intestine is a rather narrow looped tube of the adult hindgut.[accessedResource: TGMA:0001024][accessDate: 10-05-2010]
BTO:0000651
ZFA:0001323
mid intestine
The part of the intestine that lies between the stomach and colon, consists of duodenum, jejunum, and ileum, secretes digestive enzymes, and is the chief site of the absorption of digested nutrients. The proximal portion of the intestine.[accessedResource: BTO:0000651][accessDate: 10-05-2010]
James Malone
XAO:0000130
anterior intestine[accessedResource: MAT:0000047][accessDate: 10-05-2010]
TGMA:0001024
intestinum tenue[accessedResource: BTO:0000651][accessDate: 10-05-2010]
The anterior intestine is a rather narrow looped tube of the adult hindgut.
MAT:0000047
anterior intestine
small intestine
urocortin II
James Malone
A benign epithelial neoplasm arising from the hepatocytes. Grossly, it appears as a soft, round mass which often contains areas of hemorrhage and necrosis. Morphologically, the neoplastic cells resemble normal hepatocytes and form plates separated by sinusoids. Most patients have a history of contraceptive or anabolic steroids use.
Liver Cell Adenoma[accessedResource: NCIt:C3758][accessDate: 10-05-2010]
A benign epithelial neoplasm arising from the hepatocytes. Grossly, it appears as a soft, round mass which often contains areas of hemorrhage and necrosis. Morphologically, the neoplastic cells resemble normal hepatocytes and form plates separated by sinusoids. Most patients have a history of contraceptive or anabolic steroids use.[accessedResource: NCIt:C3758][accessDate: 10-05-2010]
Adenoma of Liver Cells[accessedResource: NCIt:C3758][accessDate: 10-05-2010]
Liver Cell Adenoma
Adenoma of the Liver Cells[accessedResource: NCIt:C3758][accessDate: 10-05-2010]
HCA[accessedResource: NCIt:C3758][accessDate: 10-05-2010]
Adenoma of Liver Cells
NCIt:C3758
HCA
hepatocellular adenoma
Adenoma of the Liver Cells
R43
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158929&type=germplasm
CS57905 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158929&type=germplasm
CS57905
James Malone
James Malone
Natural Language Generator 8th April 2010
A NCI H929 is a cell line.
A NCI H929 is all of the following: something that is bearer of a multiple myeloma, something that derives
from a B cell, and something that derives from a bone marrow.
NCI-H929
MO_772
operon identification design
Tomasz Adamusiak
HCC1395
James Malone
Ele Holloway
GeneRIF:15469899
SNOMEDCT:21708004
Osteoblastic osteosarcoma[accessedResource: SNOMEDCT:21708004][accessDate: 10-05-2010]
osteoid sarcoma
GeneRIF:15221963
Osteosarcomas[accessedResource: MSH:D012516][accessDate: 10-05-2010]
NCIt:C9312
GeneRIF:14719070
Osteogenic Sarcomas
GeneRIF:14704791
GeneRIF:12376862
GeneRIF:11776394
GeneRIF:12709413
NCIt:C9145
Osteosarcoma of bone[accessedResource: SNOMEDCT:307576001][accessDate: 10-05-2010]
GeneRIF:15870699
GeneRIF:13678785
Osteosarcoma of bone (disorder)
Sarcomas, Osteogenic[accessedResource: MSH:D012516][accessDate: 10-05-2010]
GeneRIF:12544770
Osteosarcomas
GeneRIF:12009018
GeneRIF:15026342
GeneRIF:14584080
James Malone
A sarcoma originating in bone-forming cells, affecting the ends of long bones. It is the most common and most malignant of sarcomas of the bones, and occurs chiefly among 10- to 25-year-old youths. (From Stedman, 25th ed)[accessedResource: MSH:D012516][accessDate: 10-05-2010]
GeneRIF:12479099
Osseous Sarcoma
GeneRIF:11920494
GeneRIF:11606061
Osteosarcoma, no ICD-O subtype
GeneRIF:15796961
GeneRIF:12393937
Sarcoma of Bone[accessedResource: NCIt:C9312][accessDate: 10-05-2010]
GeneRIF:15662138
GeneRIF:12660817
GeneRIF:14524531
A malignant mesenchymal tumor arising from the bone.[accessedResource: NCIt:C9312][accessDate: 10-05-2010]
GeneRIF:15488761
osteosarcoma
GeneRIF:14710359
GeneRIF:12154052
GeneRIF:12209731
GeneRIF:15609301
Bone Sarcoma[accessedResource: NCIt:C9312][accessDate: 10-05-2010]
Osteogenic sarcoma, NOS[accessedResource: SNOMEDCT:21708004][accessDate: 10-05-2010]
Osteosarcoma - disorder[accessedResource: SNOMEDCT:307576001][accessDate: 10-05-2010]
Osteosarcoma, no ICD-O subtype[accessedResource: SNOMEDCT:21708004][accessDate: 10-05-2010]
Osteosarcoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:21708004][accessDate: 10-05-2010]
GeneRIF:15900593
GeneRIF:15448009
A malignant mesenchymal tumor arising from the bone.
Osteochondrosarcoma
Sarcoma of the Bone
Sarcoma of Bone
[M]Osteosarcoma NOS[accessedResource: SNOMEDCT:21708004][accessDate: 10-05-2010]
SNOMEDCT:307576001
GeneRIF:14645574
GeneRIF:15814634
GeneRIF:11746983
Osteosarcoma of bone (disorder)[accessedResource: SNOMEDCT:307576001][accessDate: 10-05-2010]
GeneRIF:11943335
GeneRIF:15310147
GeneRIF:15201972
GeneRIF:12237108
GeneRIF:15145525
Sarcoma, Osteogenic[accessedResource: MSH:D012516][accessDate: 10-05-2010]
Osteosarcoma, NOS
GeneRIF:15583032
GeneRIF:15087387
Bone Sarcoma
Osteoblastic osteosarcoma
GeneRIF:14679136
MSH:D012516
GeneRIF:16087680
GeneRIF:15476586
GeneRIF:12972634
Skeletal Sarcoma[accessedResource: NCIt:C9312][accessDate: 10-05-2010]
Osteosarcoma, NOS[accessedResource: SNOMEDCT:21708004][accessDate: 10-05-2010]
GeneRIF:15701832
GeneRIF:15580288
Skeletal sarcoma
GeneRIF:14528100
Osteoblastic sarcoma
GeneRIF:14598886
GeneRIF:16035619
[M]Osteosarcoma NOS
GeneRIF:12054567
GeneRIF:12663494
Osteosarcoma of bone
DOID:3347
Osseous Sarcoma[accessedResource: NCIt:C9312][accessDate: 10-05-2010]
osteoid sarcoma[accessedResource: DOID:3347][accessDate: 10-05-2010]
Sarcoma of the Bone[accessedResource: NCIt:C9312][accessDate: 10-05-2010]
Osteosarcoma - disorder
Osteogenic sarcoma, NOS
A sarcoma originating in bone-forming cells, affecting the ends of long bones. It is the most common and most malignant of sarcomas of the bones, and occurs chiefly among 10- to 25-year-old youths. (From Stedman, 25th ed)
Osteoblastic sarcoma[accessedResource: SNOMEDCT:21708004][accessDate: 10-05-2010]
GeneRIF:12792742
GeneRIF:15922739
GeneRIF:12788094
GeneRIF:15668906
GeneRIF:15210853
GeneRIF:16328004
GeneRIF:16157226
GeneRIF:11927012
A usually aggressive malignant bone-forming mesenchymal tumor, predominantly affecting adolescents and young adults. It usually involves bones and less frequently extraosseous sites. It often involves the long bones (particularly distal femur, proximal tibia, and proximal humerus). Pain with or without a palpable mass is the most frequent clinical symptom. It may spread to other anatomic sites, particularly the lungs.[accessedResource: NCIt:C9145][accessDate: 10-05-2010]
GeneRIF:15719069
Sarcoma, Osteogenic
Osteochondrosarcoma[accessedResource: SNOMEDCT:21708004][accessDate: 10-05-2010]
GeneRIF:16010425
Osteosarcoma, no ICD-O subtype (morphologic abnormality)
A usually aggressive malignant bone-forming mesenchymal tumor, predominantly affecting adolescents and young adults. It usually involves bones and less frequently extraosseous sites. It often involves the long bones (particularly distal femur, proximal tibia, and proximal humerus). Pain with or without a palpable mass is the most frequent clinical symptom. It may spread to other anatomic sites, particularly the lungs.
ZEA:0015151
OntologyMappingImporter following MAT:0000224
MAT:0000224
PO:0020148
apical shoot meristem
James Malone
Derived from BFO: Occurrent
The life of an organism, a surgical operation as processual context for a nosocomical infection, the spatiotemporal context occupied by a process of cellular meiosis, the spatiotemporal region occupied by the development of a cancer tumor.
A temporal entity is an entity that has temporal parts and that happens, unfolds or develops through time. An occurrent is something which exists over time, rather than existing completely at many times
temporal measurement
James Malone
thyroid primordium[accessedResource: MAT:0000081][accessDate: 10-05-2010]
TAO:0001081
thyroid follicle[accessedResource: ZFA:0001072][accessDate: 10-05-2010]
BTO:0001379
SAEL:108
EV:0100133
FMAID:9603
A two-lobed endocrine gland found in all vertebrates, located in front of and on either side of the trachea in humans, and producing various hormones, such as triiodothyronine and calcitonin.
thyroid follicle
thyroid primordium
A two-lobed endocrine gland found in all vertebrates, located in front of and on either side of the trachea in humans, and producing various hormones, such as triiodothyronine and calcitonin.[accessedResource: BTO:0001379][accessDate: 10-05-2010]
Lobular organ the parenchyma of which consists of ductless, glandular follicles filled with colloid. Examples: thyroid gland proper, accessory thyroid gland, lingual thyroid gland.[accessedResource: FMAID:9603][accessDate: 10-05-2010]
thyroid follicles[accessedResource: ZFA:0001072][accessDate: 10-05-2010]
ZFA:0001072
Lobular organ the parenchyma of which consists of ductless, glandular follicles filled with colloid. Examples: thyroid gland proper, accessory thyroid gland, lingual thyroid gland.
thyroid follicles
EMAPA:18827
thyroid
thyroid gland[accessedResource: BTO:0001379][accessDate: 10-05-2010]
MAT:0000081
James Malone
thyroid gland
MA:0000129
XAO:0000162
EHDAA:2975
SW1990
James Malone
Ele Holloway
NCIH661
James Malone
Ele Holloway
NCIH748
James Malone
Ele Holloway
A malignant tumor arising from the embryonic remains of the notochord. It is also called chordocarcinoma, chordoepithelioma, and notochordoma. (Dorland, 27th ed)
Chordoma (morphologic abnormality)
NCIt:C2947
Chordoma (morphologic abnormality)[accessedResource: SNOMEDCT:50007008][accessDate: 10-05-2010]
Chordomas[accessedResource: MSH:D002817][accessDate: 10-05-2010]
DOID:3302
SNOMEDCT:50007008
Chordomas
A malignant tumor arising from the embryonic remains of the notochord. It is also called chordocarcinoma, chordoepithelioma, and notochordoma. (Dorland, 27th ed)[accessedResource: MSH:D002817][accessDate: 10-05-2010]
MSH:D002817
notochordoma[accessedResource: DOID:3302][accessDate: 10-05-2010]
James Malone
notochordoma
A malignant bone tumor arising from the remnants of the fetal notochord. Although it can occur at all ages, it is more frequently seen in middle-aged adults. Most frequent sites of involvement are: sacrococcygeal area, spheno-occipital area, and the cervico-thoraco-lumbar spine. Microscopically, chordomas are composed of cells that form cords and lobules, separated by mucoid intercellular tissue. Some of the cells are large (physaliphorous) and have vacuolated cytoplasm and prominent vesicular nuclei. Other tumor cells are small with small nuclei without visible nucleoli. Chordomas tend to recur and may metastasize. The most common sites of metastasis are skin and bone.
chordoma
GeneRIF:16288985
A malignant bone tumor arising from the remnants of the fetal notochord. Although it can occur at all ages, it is more frequently seen in middle-aged adults. Most frequent sites of involvement are: sacrococcygeal area, spheno-occipital area, and the cervico-thoraco-lumbar spine. Microscopically, chordomas are composed of cells that form cords and lobules, separated by mucoid intercellular tissue. Some of the cells are large (physaliphorous) and have vacuolated cytoplasm and prominent vesicular nuclei. Other tumor cells are small with small nuclei without visible nucleoli. Chordomas tend to recur and may metastasize. The most common sites of metastasis are skin and bone.[accessedResource: NCIt:C2947][accessDate: 10-05-2010]
InChI=1/C20H15N3O2/c24-19-15-11-17(21-13-7-3-1-4-8-13)18(12-16(15)20(25)23-19)22-14-9-5-2-6-10-14/h1-12,21-22H,(H,23,24,25)/f/h23H
InChIKey=AAALVYBICLMAMA-MPIMZMORCI
DAPH1
5,6-bis(phenylamino)-1H-isoindole-1,3(2H)-dione
CHEBI:53110
Phthalimide substituted at the 4- and 5-positions by anilino groups.
Cgp 52411
James Malone
O=C1NC(=O)c2cc(Nc3ccccc3)c(Nc3ccccc3)cc12
DAPH
4,5-dianilinophthalimide
C20H15N3O2
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0002487
James Malone
LHSR is a cell line in which human prostate epithelial cells (PrEC) were infected with amphotropic retroviruses encoding the SV40 large T antigen (L), the telomerase catalytic subunit hTERT (H), the SV40 small T antigen (S) and an oncogenic allele of H-ras (R) to create LHSR cells.
LHSR
ZFS:0000008
blastula 128-cell
James Malone
Synovium
The inner layer of the connective tissue that seals the joint.
NCIt:C12473
The inner layer of the connective tissue that seals the joint.[accessedResource: NCIt:C12473][accessDate: 10-05-2010]
The inner membrane of a joint capsule surrounding a freely movable joint. It is loosely attached to the external fibrous capsule and secretes synovial fluid. (MeSH)
synovial membrane
Synovium[accessedResource: NCIt:C12473][accessDate: 10-05-2010]
James Malone
MO_899
array platform variation design
Tomasz Adamusiak
A syndrome characterized by multiple system abnormalities including DWARFISM; PHOTOSENSITIVITY DISORDERS; PREMATURE AGING; and HEARING LOSS. It is caused by mutations of a number of autosomal recessive genes encoding proteins that involve transcriptional-coupled DNA REPAIR processes. Cockayne syndrome is classified by the severity and age of onset. Type I (classical; CSA) is early childhood onset in the second year of life; type II (congenital; CSB) is early onset at birth with severe symptoms; type III (xeroderma pigmentosum; XP) is late childhood onset with mild symptoms.[accessedResource: MSH:D003057][accessDate: 10-05-2010]
Cockayne Syndrome, Group B
GeneRIF:12095617
Cockayne Syndrome, Type B
James Malone
Type III Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 10-05-2010]
A syndrome characterized by multiple system abnormalities including DWARFISM; PHOTOSENSITIVITY DISORDERS; PREMATURE AGING; and HEARING LOSS. It is caused by mutations of a number of autosomal recessive genes encoding proteins that involve transcriptional-coupled DNA REPAIR processes. Cockayne syndrome is classified by the severity and age of onset. Type I (classical; CSA) is early childhood onset in the second year of life; type II (congenital; CSB) is early onset at birth with severe symptoms; type III (xeroderma pigmentosum; XP) is late childhood onset with mild symptoms.
Cockayne Syndrome, Group A[accessedResource: MSH:D003057][accessDate: 10-05-2010]
Cockayne's syndrome
Cockayne syndrome (disorder)[accessedResource: SNOMEDCT:21086008][accessDate: 10-05-2010]
Dwarfism-retinal atrophy-deafness syndrome
GeneRIF:12748643
Cockayne Syndrome Type 3
cockayne syndrome
Cockayne syndrome (disorder)
An autosomal recessive syndrome caused by mutations in the ERCC8 and ERCC6 genes. It is characterized by growth and developmental delay, vision and hearing impairment, and impairment of the peripheral nervous system function.
Cokayne syndrome
Syndrome, Progeria-Like[accessedResource: MSH:D003057][accessDate: 10-05-2010]
Type III Cockayne Syndrome
Group C Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 10-05-2010]
GeneRIF:11809892
Cockayne Syndrome Type 3[accessedResource: MSH:D003057][accessDate: 10-05-2010]
Progeria-Like Syndrome
Cockayne Syndrome, Type II
Cokayne syndrome[accessedResource: SNOMEDCT:21086008][accessDate: 10-05-2010]
DOID:2962
An autosomal recessive syndrome caused by mutations in the ERCC8 and ERCC6 genes. It is characterized by growth and developmental delay, vision and hearing impairment, and impairment of the peripheral nervous system function.[accessedResource: NCIt:C9460][accessDate: 10-05-2010]
Cockayne Syndrome, Type A[accessedResource: MSH:D003057][accessDate: 10-05-2010]
A simple genetic disease that is caused by a rare autosomal recessive mutations in two DNA excision repair proteins, ERCC-8 and ERCC-6, and characterized by growth failure, impaired development of the nervous system, abnormal sensitivity to sunlight (photosensitivity), and premature aging.
NCIt:C9460
Caused by mutations of gene ERCC6.
Caused by mutations of gene CKN1.[accessedResource: MSH:D003057][accessDate: 10-05-2010]
Type II Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 10-05-2010]
Type I Cockayne Syndrome
Progeria-Like Syndromes
SNOMEDCT:21086008
Group B Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 10-05-2010]
Caused by mutations of gene ERCC6.[accessedResource: MSH:D003057][accessDate: 10-05-2010]
Type C is a rare form. Its genetic defect is not clear; appears to be a heterogeneous group. OMIM suggests that Type C should not be used anymore.[accessedResource: MSH:D003057][accessDate: 10-05-2010]
Cockayne Syndrome, Group C
Progeria-Like Syndromes[accessedResource: MSH:D003057][accessDate: 10-05-2010]
A simple genetic disease that is caused by a rare autosomal recessive mutations in two DNA excision repair proteins, ERCC-8 and ERCC-6, and characterized by growth failure, impaired development of the nervous system, abnormal sensitivity to sunlight (photosensitivity), and premature aging.[accessedResource: DOID:2962][accessDate: 10-05-2010]
GeneRIF:16246722
Type C is a rare form. Its genetic defect is not clear; appears to be a heterogeneous group. OMIM suggests that Type C should not be used anymore.
Type B Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 10-05-2010]
Cockayne Syndrome, Type I[accessedResource: MSH:D003057][accessDate: 10-05-2010]
GeneRIF:15082767
Type A Cockayne Syndrome
Cockayne's syndrome[accessedResource: DOID:2962][accessDate: 10-05-2010]
Cockayne Syndrome Type C[accessedResource: MSH:D003057][accessDate: 10-05-2010]
Group A Cockayne Syndrome
Cockayne Syndrome Type C
MSH:D003057
Caused by mutations of gene CKN1.
Dwarfism-retinal atrophy-deafness syndrome[accessedResource: SNOMEDCT:21086008][accessDate: 10-05-2010]
intestinal parasitism NOS (disorder)
Parasitic Diseases
intestinal parasitism, unspecified[accessedResource: DOID:1398][accessDate: 10-05-2010]
Parasitism, NOS
Parasitic endophthalmitis NOS (disorder)[accessedResource: DOID:1398][accessDate: 10-05-2010]
A disease by infectious agent that is carried out by parasite which by definition is a pathogen that simultaneously injures and derives sustenance from its host.
skin Infestation NOS[accessedResource: DOID:1398][accessDate: 10-05-2010]
DOID:1398
Parasitic endophthalmitis (disorder)
Parasitic disease, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 10-05-2010]
parasitic skin disorder
PARASITIC DIS[accessedResource: MSH:D010272][accessDate: 10-05-2010]
Parasitic endophthalmitis NOS
A successful invasion of a host by an organism that uses the host for food and shelter.
Parasitosis[accessedResource: SNOMEDCT:17322007][accessDate: 10-05-2010]
Parasitism
GeneRIF:12045244
Infestation, NOS
Ectoparasitic disease
Parasite infestation, NOS
Infestation, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 10-05-2010]
parasitic liver infectious disease
parasitic intestinal infectious disease[accessedResource: DOID:1398][accessDate: 10-05-2010]
Parasitic infection, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 10-05-2010]
A disease by infectious agent that is carried out by parasite which by definition is a pathogen that simultaneously injures and derives sustenance from its host.[accessedResource: DOID:1398][accessDate: 10-05-2010]
parasitic endophthalmitis[accessedResource: DOID:1398][accessDate: 10-05-2010]
intestinal parasitism, unspecified
Parasitic infectious disease, NOS
Parasitic infection of skin[accessedResource: DOID:1398][accessDate: 10-05-2010]
parasitic infestation of orbit[accessedResource: DOID:1398][accessDate: 10-05-2010]
intestinal parasitism, unspecified (disorder)[accessedResource: DOID:1398][accessDate: 10-05-2010]
Parasitic eye infection (disorder)
SNOMEDCT:17322007
Parasitosis
parasitic pregnancy complication
parasitic skin disorder[accessedResource: DOID:1398][accessDate: 10-05-2010]
parasitic infestation of orbit
Infections or infestations with parasitic organisms. They are often contracted through contact with an intermediate vector, but may occur as the result of direct exposure.
Parasite infestation, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 10-05-2010]
parasitic gastrointestinal disorder
Parasitism, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 10-05-2010]
psorospermiasis
parasitic lung infectious disease[accessedResource: DOID:1398][accessDate: 10-05-2010]
parasitic lung infectious disease
Parasitic disease
parasitic pregnancy complication[accessedResource: DOID:1398][accessDate: 10-05-2010]
Disease caused by parasite, NOS
parasitic intestinal infectious disease
parasitic skin infectious disease[accessedResource: DOID:1398][accessDate: 10-05-2010]
Disease caused by parasite (disorder)
Infestation
Parasitic infection of lung[accessedResource: DOID:1398][accessDate: 10-05-2010]
Parasitosis, NOS
Parasitic infection of lung
animal parasitic infectious disease[accessedResource: DOID:1398][accessDate: 10-05-2010]
parasitic Infection
intestinal parasitism (disorder)[accessedResource: DOID:1398][accessDate: 10-05-2010]
Psorospermiasis (disorder)
Disease caused by parasite, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 10-05-2010]
Disease, Parasitic[accessedResource: MSH:D010272][accessDate: 10-05-2010]
parasitic gastrointestinal disorder[accessedResource: DOID:1398][accessDate: 10-05-2010]
GeneRIF:15471863
Parasitic disease NOS
Parasitic eye infection (disorder)[accessedResource: DOID:1398][accessDate: 10-05-2010]
parasitic eye infection
parasitic liver disorder
James Malone
Disease caused by parasite (disorder)[accessedResource: SNOMEDCT:17322007][accessDate: 10-05-2010]
parasitic eye infectious disease
Parasite infestation
Parasitic infectious disease of the central nervous system (disorder)
Parasitic infectious disease of the central nervous system (disorder)[accessedResource: DOID:1398][accessDate: 10-05-2010]
parasitic animal[accessedResource: DOID:1398][accessDate: 10-05-2010]
parasitemia
Psorospermiasis (disorder)[accessedResource: DOID:1398][accessDate: 10-05-2010]
parasitic animal
intestinal parasitism (disorder)
Parasitic infectious disease, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 10-05-2010]
parasitic eye infection[accessedResource: DOID:1398][accessDate: 10-05-2010]
Parasitic endophthalmitis NOS (disorder)
parasitic infectious disease
central nervous system parasitic infectious disease
psorospermiasis[accessedResource: DOID:1398][accessDate: 10-05-2010]
MSH:D010272
parasitic eye infectious disease[accessedResource: DOID:1398][accessDate: 10-05-2010]
Parasite infestation[accessedResource: SNOMEDCT:17322007][accessDate: 10-05-2010]
Parasitosis, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 10-05-2010]
Parasitic endophthalmitis (disorder)[accessedResource: DOID:1398][accessDate: 10-05-2010]
Parasitic infection of skin
Infections or infestations with parasitic organisms. They are often contracted through contact with an intermediate vector, but may occur as the result of direct exposure.[accessedResource: MSH:D010272][accessDate: 10-05-2010]
parasitic skin infectious disease
Disease caused by parasite
skin Infestation NOS
Parasitic infestation of orbit (disorder)
Parasitic skin infestation (disorder)
Ectoparasitic disease[accessedResource: DOID:1398][accessDate: 10-05-2010]
intestinal parasitism, unspecified (disorder)
Parasitic infestation of orbit (disorder)[accessedResource: DOID:1398][accessDate: 10-05-2010]
Parasitic infection, NOS
GeneRIF:11444968
parasitic infectious disease[accessedResource: DOID:1398][accessDate: 10-05-2010]
Diseases, Parasitic[accessedResource: MSH:D010272][accessDate: 10-05-2010]
A successful invasion of a host by an organism that uses the host for food and shelter.[accessedResource: NCIt:C27864][accessDate: 10-05-2010]
Infestation[accessedResource: SNOMEDCT:17322007][accessDate: 10-05-2010]
parasitic liver infectious disease[accessedResource: DOID:1398][accessDate: 10-05-2010]
animal parasitic infectious disease
NCIt:C27864
PARASITIC DIS
Parasitism[accessedResource: SNOMEDCT:17322007][accessDate: 10-05-2010]
Parasitic skin infestation (disorder)[accessedResource: DOID:1398][accessDate: 10-05-2010]
Disease caused by parasite[accessedResource: SNOMEDCT:17322007][accessDate: 10-05-2010]
parasitic liver disorder[accessedResource: DOID:1398][accessDate: 10-05-2010]
Parasitic endophthalmitis NOS[accessedResource: DOID:1398][accessDate: 10-05-2010]
parasitic endophthalmitis
central nervous system parasitic infectious disease[accessedResource: DOID:1398][accessDate: 10-05-2010]
intestinal parasitism NOS (disorder)[accessedResource: DOID:1398][accessDate: 10-05-2010]
parasitemia[accessedResource: DOID:1398][accessDate: 10-05-2010]
James Malone
BTO:0000040
anterior lobe of pituitary
adenohypophysis
ZFA:0001282
The anterior glandular lobe of the pituitary gland.
anterior hypophysis
anterior pituitary gland
anterior lobe of pituitary[accessedResource: NIFSTD:birnlex_1581][accessDate: 10-05-2010]
The anterior lobe of the hypophysis (pituitary gland). This lobe contains cells that produce prolactin, growth hormone, thyroid-stimulating hormone, follicle-stimulating hormone and proopiomelanocortin. In contrast to mammalian vertebrates, the adenohypophysis remains in a subepithelial position and there exists no equivalent of Rathke's pouch in zebrafish.[accessedResource: ZFA:0001282][accessDate: 10-05-2010]
anterior hypophysis[accessedResource: ZFA:0001282][accessDate: 10-05-2010]
anterior pituitary[accessedResource: BTO:0000040][accessDate: 10-05-2010]
The anterior glandular lobe of the pituitary gland.[accessedResource: BTO:0000040][accessDate: 10-05-2010]
NIFSTD:birnlex_1581
Tomasz Adamusiak
anterior pituitary gland[accessedResource: BTO:0000040][accessDate: 10-05-2010]
anterior pituitary
The anterior lobe of the hypophysis (pituitary gland). This lobe contains cells that produce prolactin, growth hormone, thyroid-stimulating hormone, follicle-stimulating hormone and proopiomelanocortin. In contrast to mammalian vertebrates, the adenohypophysis remains in a subepithelial position and there exists no equivalent of Rathke's pouch in zebrafish.
ZFS:0000036
larval day 4
James Malone
PNS - sympathetic[accessedResource: MAT:0000100][accessDate: 10-05-2010]
peripheral nervous system[accessedResource: ZFA:0000142][accessDate: 10-05-2010]
sympathetic chain
peripheral nervous system
Sympathetic part of autonomic division of nervous system
pns
Nervous structures including ganglia outside of the central nervous system.
MA:0000225
sympathetic nervous system
Sympathetic part of autonomic division of nervous system[accessedResource: FMAID:9906][accessDate: 10-05-2010]
XAO:0000211
pns[accessedResource: ZFA:0000142][accessDate: 10-05-2010]
James Malone
ZFA:0000142
TAO:0001576
PNS - sympathetic
One of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord, and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera, and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter.
sympathetic chain[accessedResource: MAT:0000100][accessDate: 10-05-2010]
MAT:0000100
EHDAA:3769
FMAID:9906
Nervous structures including ganglia outside of the central nervous system.[accessedResource: ZFA:0000142][accessDate: 10-05-2010]
EMAPA:16985
EV:0100374
BTO:0001832
One of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord, and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera, and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter.[accessedResource: BTO:0001832][accessDate: 10-05-2010]
XAO:0003196
FMA:7190
TAO:0001149
olfactory system
chemosensory sensory organ
MA:0002445
ZFA:0001149
"western European house mouse"
"Mus domesticus"
http://www.ebi.ac.uk/efo/EFO_0002647
Mus musculus domesticus
James Malone
MAT:0000237
seedhead
James Malone
JCRB0253
BTO:0002381
MKN-28 cell[accessedResource: BTO:0002381][accessDate: 10-05-2010]
Well differentiated human gastric adenocarcinoma cell line.
MKN28
Well differentiated human gastric adenocarcinoma cell line.[accessedResource: BTO:0002381][accessDate: 10-05-2010]
MKN28 cell
MKN28 cell[accessedResource: BTO:0002381][accessDate: 10-05-2010]
Ele Holloway
MKN-28 cell
MKN-28
James Malone
MDAMB436
James Malone
HepaRG
James Malone
MA:0000663
AAO:0000222
hindlimb muscle
James Malone
Ewing Family of Tumors
A malignant tumor of the bone which always arises in the medullary tissue, occurring more often in cylindrical bones. There are conspicuous foci of necrosis in association with irregular masses of small, regular, rounded or ovoid cells with very scanty cytoplasm. The tumor occurs usually before the age of 20, about twice as frequently in males as in females. (From Dorland, 27th ed; Stedman, 25th ed)[accessedResource: MSH:D012512][accessDate: 10-05-2010]
ES[accessedResource: NCIt:C4817][accessDate: 10-05-2010]
duplicate of EFO_0000174 Ewing's sarcoma
GeneRIF:14977835
Sarcoma, Ewing
A malignant tumor of the bone which always arises in the medullary tissue, occurring more often in cylindrical bones. There are conspicuous foci of necrosis in association with irregular masses of small, regular, rounded or ovoid cells with very scanty cytoplasm. The tumor occurs usually before the age of 20, about twice as frequently in males as in females. (From Dorland, 27th ed; Stedman, 25th ed)
Ewing's sarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:76909002][accessDate: 10-05-2010]
MSH:D012512
Ewing's Family of Tumors
GeneRIF:12700668
Ewing's Sarcoma/Peripheral Primitive Neuroectodermal Tumor[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
GeneRIF:11956622
Ewing Sarcoma/Peripheral Primitive Neuroectodermal Tumor
Ewing's Family of Tumors[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
ES
GeneRIF:11313995
Ewings Tumor
Ewing Tumor[accessedResource: MSH:D012512][accessDate: 10-05-2010]
Ewing's Sarcoma/Peripheral Primitive Neuroectodermal Tumor
GeneRIF:15919668
GeneRIF:15328192
NCIt:C27291
GeneRIF:15581626
GeneRIF:14528100
GeneRIF:15748890
Ewing Family of Tumors[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
GeneRIF:12447693
GeneRIF:12557222
Ewing's tumour
A small round cell tumor that lacks morphologic, immunohistochemical, and electron microscopic evidence of neuroectodermal differentiation. It represents one of the two ends of the spectrum called Ewing's sarcoma/peripheral neuroectodermal tumor. It affects mostly males under age 20, and it can occur in soft tissue or bone. Pain and the presence of a mass are the most common clinical symptoms.[accessedResource: NCIt:C4817][accessDate: 10-05-2010]
Tumor, Ewing's[accessedResource: MSH:D012512][accessDate: 10-05-2010]
true
GeneRIF:11992404
GeneRIF:12172985
GeneRIF:12527902
Sarcoma, Ewing[accessedResource: MSH:D012512][accessDate: 10-05-2010]
Tumors of the Ewing's Family
obsolete_Ewing family tumor
Ewing's Family of Tumours
NCIt:C4817
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms.
Ewing Tumor
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms.[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
GeneRIF:12054564
GeneRIF:15044653
DOID:3369
GeneRIF:15282325
SNOMEDCT:76909002
Ewing's sarcoma
A small round cell tumor that lacks morphologic, immunohistochemical, and electron microscopic evidence of neuroectodermal differentiation. It represents one of the two ends of the spectrum called Ewing's sarcoma/peripheral neuroectodermal tumor. It affects mostly males under age 20, and it can occur in soft tissue or bone. Pain and the presence of a mass are the most common clinical symptoms.
Tumors of the Ewing's Family[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
Ewing Sarcoma/Peripheral Primitive Neuroectodermal Tumor[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
Ewing's Family of Tumours[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
GeneRIF:15273724
Ewing's sarcoma (morphologic abnormality)
Ewings sarcoma[accessedResource: DOID:3369][accessDate: 10-05-2010]
1.8
GeneRIF:15310753
Ewing's tumour[accessedResource: SNOMEDCT:76909002][accessDate: 10-05-2010]
GeneRIF:15077162
James Malone
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms. -- 2004
3T3-L1
James Malone
InChIKey=HMFKFHLTUCJZJO-UHFFFAOYAO
InChI=1/C26H50O10/c1-2-3-4-5-6-7-8-9-10-11-24(30)34-19-18-31-20-22(32-15-12-27)26-25(35-17-14-29)23(21-36-26)33-16-13-28/h22-23,25-29H,2-21H2,1H3
polysorbate 20
Anthrax (disorder)
Other specified manifestations of anthrax
Anthrax (disorder)[accessedResource: SNOMEDCT:409498004][accessDate: 10-05-2010]
Anthrax NOS (disorder)[accessedResource: SNOMEDCT:186304006][accessDate: 10-05-2010]
Other specified anthrax manifestations
[X]Anthrax, unspecified[accessedResource: SNOMEDCT:187302001][accessDate: 10-05-2010]
Anthrax, unspecified[accessedResource: ICD9:022.9][accessDate: 10-05-2010]
SNOMEDCT:186303000
Anthrax, unspecified
DOID:7427
Other specified anthrax manifestations (disorder)
GeneRIF:16194238
GeneRIF:15569923
Charbon[accessedResource: SNOMEDCT:409498004][accessDate: 10-05-2010]
Infection due to Bacillus anthracis
[X]Anthrax, unspecified (disorder)[accessedResource: SNOMEDCT:187302001][accessDate: 10-05-2010]
Anthrax NOS
[X]Anthrax, unspecified (disorder)
GeneRIF:16239556
OTHER ANTHRAX MANIFEST
James Malone
Other specified anthrax manifestations[accessedResource: SNOMEDCT:186303000][accessDate: 10-05-2010]
ICD9:022
Splenic fever[accessedResource: SNOMEDCT:409498004][accessDate: 10-05-2010]
ICD9:022.8
[X]Anthrax, unspecified
Splenic fever
SNOMEDCT:186304006
anthrax
Anthrax NOS[accessedResource: SNOMEDCT:186304006][accessDate: 10-05-2010]
Infection due to Bacillus anthracis[accessedResource: SNOMEDCT:409498004][accessDate: 10-05-2010]
Charbon
Other specified manifestations of anthrax[accessedResource: ICD9:022.8][accessDate: 10-05-2010]
Milzbrand
Other specified anthrax manifestations (disorder)[accessedResource: SNOMEDCT:186303000][accessDate: 10-05-2010]
OTHER ANTHRAX MANIFEST[accessedResource: ICD9:022.8][accessDate: 10-05-2010]
Anthrax NOS (disorder)
GeneRIF:15689409
SNOMEDCT:409498004
SNOMEDCT:187302001
ICD9:022.9
Milzbrand[accessedResource: SNOMEDCT:409498004][accessDate: 10-05-2010]
NCIt:C12731
The upper arm bone between the shoulder and elbow.
The upper arm bone between the shoulder and elbow.[accessedResource: NCIt:C12731][accessDate: 10-05-2010]
humerus
James Malone
NCI Thesaurus:C81317
The stage of the mother from immediately after the birth of offspring and extending for about six weeks
postnatal
NCIH1838
James Malone
Ele Holloway
FMAID:87217
descending thoracic aorta
Tomasz Adamusiak
Jie Zheng
SW1088
James Malone
Ele Holloway
UMC11
James Malone
Ele Holloway
FBbt:00005611
adult foregut precursor
James Malone
GeneRIF:12970064
Lipoma of other skin and subcutaneous tissue[accessedResource: ICD9:214.1][accessDate: 10-05-2010]
LIPOMA NEC
A benign, usually painless, well-circumscribed lipomatous tumor composed of adipose tissue.[accessedResource: NCIt:C3192][accessDate: 10-05-2010]
[M]Lipoma NOS[accessedResource: SNOMEDCT:189776008][accessDate: 10-05-2010]
Lipoma of unspecified body site[accessedResource: SNOMEDCT:93163002][accessDate: 10-05-2010]
DOID:9291
ICD9:214.8
SNOMEDCT:189013001
SNOMEDCT:93163002
SNOMEDCT:46720004
Lipoma (disorder)[accessedResource: SNOMEDCT:93163002][accessDate: 10-05-2010]
Lipoma, no ICD-O subtype (morphologic abnormality)
LIPOMA NEC[accessedResource: ICD9:214.8][accessDate: 10-05-2010]
Lipoma, unspecified site
Lipoma of other specified sites (disorder)
ICD9:214
Lipoma of other specified sites
Lipoma of other specified sites (disorder)[accessedResource: SNOMEDCT:189013001][accessDate: 10-05-2010]
LIPOMA NOS
Lipoma (clinical)
Lipoma, unspecified site[accessedResource: ICD9:214.9][accessDate: 10-05-2010]
Lipoma (clinical)[accessedResource: SNOMEDCT:93163002][accessDate: 10-05-2010]
lipoma
Lipoma of unspecified body site
[M]Lipoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189776008][accessDate: 10-05-2010]
Lipoma NOS (disorder)[accessedResource: SNOMEDCT:189018005][accessDate: 10-05-2010]
Lipoma, no ICD-O subtype
Lipoma NOS (disorder)
Lipoma of other skin and subcutaneous tissue
Lipoma (disorder)
LIPOMA SKIN NEC[accessedResource: ICD9:214.1][accessDate: 10-05-2010]
Lipoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:46720004][accessDate: 10-05-2010]
[M]Lipoma NOS
Lipoma of other specified sites[accessedResource: ICD9:214.8][accessDate: 10-05-2010]
ICD9:214.1
Lipoma, no ICD-O subtype[accessedResource: SNOMEDCT:46720004][accessDate: 10-05-2010]
NCIt:C3192
A benign, usually painless, well-circumscribed lipomatous tumor composed of adipose tissue.
James Malone
SNOMEDCT:189018005
Lipoma, NOS[accessedResource: SNOMEDCT:46720004][accessDate: 10-05-2010]
[M]Lipoma NOS (morphologic abnormality)
ICD9:214.9
LIPOMA SKIN NEC
SNOMEDCT:189776008
wikipedia:http://en.wikipedia.org/wiki/Basal-like_carcinoma
basal breast tumor is a high grade, triple-negative breast tumor, i.e. they express no estrogen receptor, progesterone receptor nor Her2/neu proteins.
basal-like carcinoma
Tomasz Adamusiak
James Malone
OntologyMappingImporter following MAT:0000277
axial fin skeleton
axial fin skeleton[accessedResource: ZFA:0001123][accessDate: 10-05-2010]
median fin skeleton
unpaired fin skeleton[accessedResource: ZFA:0001123][accessDate: 10-05-2010]
unpaired fin skeleton
James Malone
MAT:0000277
ZFA:0001123
GM12878
NCIH716
James Malone
Ele Holloway
2.2
true
obsolete_SKNAS
James Malone
Ele Holloway
duplicate of EFO_0002859
GM12043
James Malone
CORL88
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0001452
Analyte role is a role borne by a molecular entity and realized in an analyte assay which achieves the objective to measure the magnitude/concentration/amount of the analyte in the entity bearing evaluant role
Analyte role is a role borne by a material entity and realized by implementation of an analyte measuring assay with objective to detect the magnitude/concentration/ amount of the analyte in the entity bearing evaluant role.
analyte
James Malone
http://en.wikipedia.org/wiki/Peritonitis#Septic_peritonitis
septic peritonitis
Tomasz Adamusiak
Ele Holloway
GM11881
James Malone
NIFSTD:sao-282380853
MAT:0000485
basal ganglia
Basal is a geometric modifier describing areas associated with the base of an organism or organism part. For example, basal ganglia.
basal
Tomasz Adamusiak
James Malone
MAT:0000276
leaf of a moss or liverwort
leaf of a moss or liverwort[accessedResource: MAT:0000276][accessDate: 10-05-2010]
phyllid
James Malone
ArrayExpress production team
RNAi profiling is an assay in which double stranded RNA is synthesized with a sequence complementary to a gene(s) of interest and introduced into a cell or organism, where it is recognized as exogenous genetic material and activates the RNAi pathway resulting in knockdown of the transcripts and providing a means to study downstream changes in gene expression.
RNAi profiling by array
James Malone
Tomasz Adamusiak
proerythroblast
rubriblast[accessedResource: CL:0000547][accessDate: 10-05-2010]
CL:0000547
An immature, nucleated erythrocyte occupying the stage of erythropoeisis that follows formation of erythroid progenitor cells.
rubriblast
pronormoblast[accessedResource: CL:0000547][accessDate: 10-05-2010]
An immature, nucleated erythrocyte occupying the stage of erythropoeisis that follows formation of erythroid progenitor cells.[accessedResource: CL:0000547][accessDate: 10-05-2010]
pronormoblast
Jie Zheng
NCIH1623
James Malone
Ele Holloway
true
UO:0000001
http://www.ebi.ac.uk/efo/EFO_0001678
A length unit is a base unit which is a standard measure of the distance between two points.
A base unit which is a standard measure of the distance between two points.
length unit
James Malone
BTO:0000106
head ganglion
cranial ganglia
cranial ganglion
James Malone
RKOE6
James Malone
Ele Holloway
Pheochromocytoma
Phaeochromocytoma
Adrenal Medullary Pheochromocytoma[accessedResource: NCIt:C3326][accessDate: 10-05-2010]
Adrenal Gland Paraganglioma
A benign or malignant neuroendocrine neoplasm of the sympathetic nervous system that secretes catecholamines. It arises from the chromaffin cells of the adrenal medulla. Clinical presentation includes headaches, palpitations, chest and abdominal pain, hypertension, fever, and tremor. Microscopically, a characteristic nesting (zellballen) growth pattern is usually seen. Other growth patterns including trabecular pattern may also be present.[accessedResource: NCIt:C3326][accessDate: 10-05-2010]
Adrenal Gland Paraganglioma[accessedResource: NCIt:C3326][accessDate: 10-05-2010]
PCC[accessedResource: NCIt:C3326][accessDate: 10-05-2010]
Adrenal Gland Chromaffinoma[accessedResource: NCIt:C3326][accessDate: 10-05-2010]
Adrenal Medullary Paraganglioma
Pheochromocytoma[accessedResource: NCIt:C3326][accessDate: 10-05-2010]
James Malone
Adrenal Pheochromocytoma[accessedResource: NCIt:C3326][accessDate: 10-05-2010]
Chromaffin Paraganglioma of the Adrenal Gland
NCIt:C3326
A benign or malignant neuroendocrine neoplasm of the sympathetic nervous system that secretes catecholamines. It arises from the chromaffin cells of the adrenal medulla. Clinical presentation includes headaches, palpitations, chest and abdominal pain, hypertension, fever, and tremor. Microscopically, a characteristic nesting (zellballen) growth pattern is usually seen. Other growth patterns including trabecular pattern may also be present.
adrenal gland pheochromocytoma
Adrenal Medullary Pheochromocytoma
Adrenal Gland Chromaffin Paraganglioma
Adrenal Pheochromocytoma
Adrenal Medullary Paraganglioma[accessedResource: NCIt:C3326][accessDate: 10-05-2010]
Adrenal Gland Chromaffinoma
PCC
Phaeochromocytoma[accessedResource: NCIt:C3326][accessDate: 10-05-2010]
Chromaffin Paraganglioma of the Adrenal Gland[accessedResource: NCIt:C3326][accessDate: 10-05-2010]
Intraadrenal Paraganglioma[accessedResource: NCIt:C3326][accessDate: 10-05-2010]
Intraadrenal Paraganglioma
Adrenal Gland Chromaffin Paraganglioma[accessedResource: NCIt:C3326][accessDate: 10-05-2010]
EVM:2990005
blastoderm stage
XAO:1000003
WBIs:0000005
blastula embryo
blastula stage
FBdv:00005304
James Malone
A human cell line derived from a pediatric patient initially classified as Wilm's tumor, reclassified as deriving from a rhabdoid tumor of the kidney
G-401
James Malone
G401
Ele Holloway
MAT:0000356
tepal
PO:0009033
BTO:0001728
A division of the perianth of a flower having a virtually indistinguishable calyx and corolla, as in tulips and lilies.
GRO:0005131[accessedResource: BTO:0001728][accessDate: 10-05-2010]
James Malone
GRO:0005131
A division of the perianth of a flower having a virtually indistinguishable calyx and corolla, as in tulips and lilies.[accessedResource: BTO:0001728][accessDate: 10-05-2010]
A paired respiratory organ in fishes consisting of gill filaments on the gill arch in the posterior portion of the head and usually providing the primary exchange of gases between the blood and the surrounding water.
branchia
MAT:0000134
XAO:0000120
gills[accessedResource: ZFA:0000354][accessDate: 10-05-2010]
Compound organ that consists of gill filaments, gill lamellae, gill rakers and pharyngeal arches 3-7. The gills are responsible for primary gas exchange between the blood and the surrounding water.
gill
branchia[accessedResource: BTO:0000518][accessDate: 10-05-2010]
James Malone
Compound organ that consists of gill filaments, gill lamellae, gill rakers and pharyngeal arches 3-7. The gills are responsible for primary gas exchange between the blood and the surrounding water.[accessedResource: ZFA:0000354][accessDate: 10-05-2010]
gills
TAO:0000354
ZFA:0000354
A paired respiratory organ in fishes consisting of gill filaments on the gill arch in the posterior portion of the head and usually providing the primary exchange of gases between the blood and the surrounding water.[accessedResource: BTO:0000518][accessDate: 10-05-2010]
external gill[accessedResource: MAT:0000134][accessDate: 10-05-2010]
external gill
BTO:0000518
MFO:0003180
Myeloid Leukemia, chronic[accessedResource: DOID:8552][accessDate: 10-05-2010]
GeneRIF:12351404
Myelogenous Leukemias, Ph1-Positive
chronic myeloid leukemia in remission
Leukemias, Ph1-Positive Myeloid[accessedResource: MSH:D015464][accessDate: 10-05-2010]
MSH:D015464
CML - chronic Myelogenous Leukemia
GeneRIF:15556610
GeneRIF:11861294
GeneRIF:15583852
GeneRIF:14586403
LEUKEMIA PHILA POS[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Granulocytic Leukemias, Chronic
GeneRIF:12144533
GeneRIF:15213099
GeneRIF:15716990
GeneRIF:12576428
Myeloid Leukemias, Philadelphia-Positive
chronic myeloid leukemia in remission[accessedResource: DOID:8552][accessDate: 10-05-2010]
CML in Remission
GeneRIF:15621754
GeneRIF:12408765
GeneRIF:15790787
CML in Remission[accessedResource: DOID:8552][accessDate: 10-05-2010]
Leukemias, Chronic Myeloid
GeneRIF:11937267
chronic myeloid leukemia in remission (disorder)
chronic myelogenous leukemia
GeneRIF:12505259
GeneRIF:12740446
chronic myeloid leukemia NOS (disorder)[accessedResource: DOID:8552][accessDate: 10-05-2010]
Clonal hematopoetic disorder caused by an acquired genetic defect in PLURIPOTENT STEM CELLS. It starts in MYELOID CELLS of the bone marrow, invades the blood and then other organs. The condition progresses from a stable, more indolent, chronic phase (LEUKEMIA, MYELOID, CHRONIC PHASE) lasting up to 7 years, to an advanced phase composed of an accelerated phase (LEUKEMIA, MYELOID, ACCELERATED PHASE) and BLAST CRISIS.[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:12393722
chronic myeloid leukemia without mention of remission
Leukemia, Chronic Myelocytic
chronic myeloid leukemia without mention of remission[accessedResource: DOID:8552][accessDate: 10-05-2010]
Chronic Myeloid Leukemias[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:15167915
chronic myeloid leukaemia[accessedResource: DOID:8552][accessDate: 10-05-2010]
Leukemias, Philadelphia-Positive Myeloid[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Leukemia, Myelogenous, Chronic, BCR-ABL Positive[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Ph1-Positive Myeloid Leukemias
GeneRIF:12130516
Leukemia, Chronic Granulocytic[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:15481444
chronic myeloid leukaemia
Leukemia, Myeloid, Ph1 Positive[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:15388581
Chronic Granulocytic Leukemia
Myelogenous Leukemias, Chronic
Myelogenous Leukemias, Ph1-Positive[accessedResource: MSH:D015464][accessDate: 10-05-2010]
CML[accessedResource: DOID:8552][accessDate: 10-05-2010]
Chronic Granulocytic Leukemias[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Chronic Myelocytic Leukemias
Leukemia, Myeloid, Ph1 Positive
chronic myeloid leukemia, disease (disorder)[accessedResource: DOID:8552][accessDate: 10-05-2010]
GeneRIF:12734675
ICD9:205.1
DOID:8552
GeneRIF:14523459
GeneRIF:15626746
1.4
GeneRIF:14656881
CML - chronic Myelogenous Leukemia[accessedResource: DOID:8552][accessDate: 10-05-2010]
chronic myeloid leukemia, disease (disorder)
GeneRIF:12576338
Myeloid Leukemia, Chronic
GeneRIF:15676212
chronic myelogenous leukemia, no ICD-O subtype (morphologic abnormality)
Myeloid Leukemia, Philadelphia-Positive
Leukemia, Ph1-Positive Myelogenous[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:11830496
GeneRIF:15735728
James Malone
chronic myelogenous leukemia, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:8552][accessDate: 10-05-2010]
GeneRIF:15569990
Leukemias, Chronic Myelocytic[accessedResource: MSH:D015464][accessDate: 10-05-2010]
CML
Leukemia, Myelogenous, Chronic, BCR-ABL Positive
GeneRIF:12964051
LEUKEMIA PHILA POS
Myelogenous Leukemias, Chronic[accessedResource: MSH:D015464][accessDate: 10-05-2010]
chronic myeloid leukemia NOS (disorder)
Leukemia, Myeloid, Philadelphia Positive[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:16361542
GeneRIF:12821944
Clonal hematopoetic disorder caused by an acquired genetic defect in PLURIPOTENT STEM CELLS. It starts in MYELOID CELLS of the bone marrow, invades the blood and then other organs. The condition progresses from a stable, more indolent, chronic phase (LEUKEMIA, MYELOID, CHRONIC PHASE) lasting up to 7 years, to an advanced phase composed of an accelerated phase (LEUKEMIA, MYELOID, ACCELERATED PHASE) and BLAST CRISIS.
Chronic Myelocytic Leukemia[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Leukemia, Myelogenous, Ph1-Positive
chronic myeloid leukemia in remission (disorder)[accessedResource: DOID:8552][accessDate: 10-05-2010]
HH
James Malone
Ele Holloway
RGD:61103
WKY
James Malone
InChI=1/C18H19N3O3S/c1-21(16-4-2-3-9-19-16)10-11-24-14-7-5-13(6-8-14)12-15-17(22)20-18(23)25-15/h2-9,15H,10-12H2,1H3,(H,20,22,23)/f/h20H
InChIKey=YASAKCUCGLMORW-UYBDAZJACF
CN(CCOc1ccc(CC2SC(=O)NC2=O)cc1)c1ccccn1
BRL-49653
5-(4-{2-[methyl(pyridin-2-yl)amino]ethoxy}benzyl)-1,3-thiazolidine-2,4-dione
A thiazolidenedione that has formula C18H19N3O3S.
C18H19N3O3S
5-((4-(2-(methyl-2-pyridinylamino)ethoxy)phenyl)methyl)-2,4-thiazolidinedione
http://www.ebi.ac.uk/efo/EFO_0001605
rosiglitazona
James Malone
rosiglitazone
rosiglitazonum
CHEBI:50122
MAT:0000023
appendage
James Malone
GeneRIF:16267761
MSH:D003586
Cytomegalic Inclusion Disease[accessedResource: MSH:D003586][accessDate: 10-05-2010]
Cytomegalovirus infection, NOS[accessedResource: SNOMEDCT:28944009][accessDate: 10-05-2010]
CMV - Cytomegalovirus infection
Cytomagalovirus infection
CYTOMEGALIC INCLUSION DIS[accessedResource: MSH:D003586][accessDate: 10-05-2010]
[X]Cytomegaloviral disease, unspecified
GeneRIF:14962896
Inclusion Diseases[accessedResource: MSH:D003586][accessDate: 10-05-2010]
SALIVARY GLAND VIRUS DIS
Cytomagalovirus infection[accessedResource: DOID:11259][accessDate: 10-05-2010]
Cytomegalovirus infectious disease
GeneRIF:12370359
GeneRIF:15528370
Infection with CYTOMEGALOVIRUS, characterized by enlarged cells bearing intranuclear inclusions. Infection may be in almost any organ, but the salivary glands are the most common site in children, as are the lungs in adults.[accessedResource: MSH:D003586][accessDate: 10-05-2010]
James Malone
Salivary gland virus disease
GeneRIF:14990723
INFECT CYTOMEGALOVIRUS
INCLUSION DIS
Cytomegaloviral disease, unspecified (disorder)
GeneRIF:15452223
DOID:11259
Infection with CYTOMEGALOVIRUS, characterized by enlarged cells bearing intranuclear inclusions. Infection may be in almost any organ, but the salivary glands are the most common site in children, as are the lungs in adults.
GeneRIF:15021824
ICD9:078.5
Cytomegalovirus infection (disorder)
SALIVARY GLAND VIRUS DIS[accessedResource: MSH:D003586][accessDate: 10-05-2010]
GeneRIF:15890971
[X]Cytomegaloviral disease, unspecified[accessedResource: SNOMEDCT:187456009][accessDate: 10-05-2010]
Cytomegaloviral disease, unspecified
Cytomegaloviral disease
Human Herpesvirus 5
INFECT CYTOMEGALOVIRUS[accessedResource: MSH:D003586][accessDate: 10-05-2010]
Inclusion Diseases
CMV - Cytomegalovirus infection[accessedResource: SNOMEDCT:28944009][accessDate: 10-05-2010]
GeneRIF:12388817
INCLUSION DIS[accessedResource: MSH:D003586][accessDate: 10-05-2010]
GeneRIF:12478407
GeneRIF:15194307
Salivary gland virus disease[accessedResource: SNOMEDCT:28944009][accessDate: 10-05-2010]
Cytomegaloviral disease, unspecified[accessedResource: DOID:11259][accessDate: 10-05-2010]
Disease due to Cytomegalovirus
Infections, Cytomegalovirus[accessedResource: MSH:D003586][accessDate: 10-05-2010]
[X]Cytomegaloviral disease, unspecified (disorder)
Cytomegalovirus infectious disease[accessedResource: DOID:11259][accessDate: 10-05-2010]
Cytomegalovirus Infections
Cytomegalovirus infection
Inclusion Disease[accessedResource: MSH:D003586][accessDate: 10-05-2010]
Diseases, Cytomegalic Inclusion
Inclusion Disease
Cytomegalovirus infection, NOS
Diseases, Cytomegalic Inclusion[accessedResource: MSH:D003586][accessDate: 10-05-2010]
SNOMEDCT:187456009
cytomegalovirus
Inclusion Disease, Cytomegalic
Cytomegalovirus Infection[accessedResource: MSH:D003586][accessDate: 10-05-2010]
GeneRIF:14993594
HCMV
SNOMEDCT:28944009
[X]Cytomegaloviral disease, unspecified (disorder)[accessedResource: SNOMEDCT:187456009][accessDate: 10-05-2010]
CYTOMEGALIC INCLUSION DIS
Cytomegalovirus infection (disorder)[accessedResource: DOID:11259][accessDate: 10-05-2010]
GeneRIF:16272328
Disease due to Cytomegalovirus[accessedResource: SNOMEDCT:28944009][accessDate: 10-05-2010]
Cytomegaloviral disease, unspecified (disorder)[accessedResource: DOID:11259][accessDate: 10-05-2010]
CYTOMEGALOVIRAL DISEASE[accessedResource: ICD9:078.5][accessDate: 10-05-2010]
GeneRIF:12466474
CAL62
James Malone
Ele Holloway
ZFS:0000001
The stage at which a diploid cell is produced by the fusion of sperm cell nucleus and egg cell.
zygote
James Malone
lateral ventricle
An internal cavity in each cerebral hemisphere that consists of a central body and three cornua including an anterior one curving forward and outward, a posterior one curving backward, and an inferior one curving downward.[accessedResource: BTO:0000879][accessDate: 10-05-2010]
Lateral Ventricles[accessedResource: C12834][accessDate: 10-05-2010]
The rostral extensions of the ventricular system of the brain consisting of two cavities, one on each side of the brain within the central regions of each cerebral hemisphere. Cerebrospinal fluid flows from the lateral ventricles into the centrally third ventricle via the foramen of Monroe.
An internal cavity in each cerebral hemisphere that consists of a central body and three cornua including an anterior one curving forward and outward, a posterior one curving backward, and an inferior one curving downward.
Lateral Ventricle of Brain[accessedResource: C12834][accessDate: 10-05-2010]
Lateral Ventricle of Brain
BTO:0000879
C12834
The rostral extensions of the ventricular system of the brain consisting of two cavities, one on each side of the brain within the central regions of each cerebral hemisphere. Cerebrospinal fluid flows from the lateral ventricles into the centrally third ventricle via the foramen of Monroe.[accessedResource: C12834][accessDate: 10-05-2010]
NIFSTD:birnlex_1263
Tomasz Adamusiak
Lateral Ventricles
James Malone
Ele Holloway
Hep-3B
Hep3B
NIFSTD:birnlex_2085
MO_601
institution
Tomasz Adamusiak
growth assay
cell proliferation assay
A population growth assay is an assay that measures the multiplication or reproduction of cells, resulting in the rapid expansion of a cell population.
population growth assay
James Malone
Flora Logan
gastrocnemius muscle
A large muscle in the back of the lower leg. Its action involves the plantar flexion of the foot.
The largest and most superficial muscle of the calf of the leg arising by two heads from the condyles of the femur and attaching to a tendon that becomes part of the Achilles tendon.
gastrocnemius muscle[accessedResource: BTO:0000506][accessDate: 10-05-2010]
A large muscle in the back of the lower leg. Its action involves the plantar flexion of the foot.[accessedResource: NCIt:C32666][accessDate: 10-05-2010]
BTO:0000506
The largest and most superficial muscle of the calf of the leg arising by two heads from the condyles of the femur and attaching to a tendon that becomes part of the Achilles tendon.[accessedResource: BTO:0000506][accessDate: 10-05-2010]
NCIt:C32666
James Malone
gastrocnemius
ZFA:0000669
MAT:0000084
Medulla ossea[accessedResource: FMAID:9608][accessDate: 10-05-2010]
kidney marrow
The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis. Davidson and Zon 2004.
bone marrow cell[accessedResource: BTO:0000141][accessDate: 10-05-2010]
TAO:0000669
Medulla ossea
The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis.
bone marrow
XAO:0000123
James Malone
The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis. Davidson and Zon 2004.[accessedResource: TAO:0000669][accessDate: 10-05-2010]
bone marrow cell
EV:0100046
medulla ossium[accessedResource: BTO:0000141][accessDate: 10-05-2010]
anterior kidney
anterior kidney[accessedResource: TAO:0000669][accessDate: 10-05-2010]
The soft, fatty, vascular tissue that fills most bone cavities and is the source of red blood cells and many white blood cells.
FMAID:9608
head kidney[accessedResource: ZFA:0000669][accessDate: 10-05-2010]
SAEL:11
head kidney
The soft, fatty, vascular tissue that fills most bone cavities and is the source of red blood cells and many white blood cells.[accessedResource: BTO:0000141][accessDate: 10-05-2010]
kidney marrow[accessedResource: ZFA:0000669][accessDate: 10-05-2010]
medulla ossium
BTO:0000141
MA:0000134
The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis.[accessedResource: ZFA:0000669][accessDate: 10-05-2010]
GeneRIF:12115687
NIFSTD:birnlex_12733
A localization-related (focal) form of epilepsy characterized by recurrent seizures that arise from foci within the temporal lobe, most commonly from its mesial aspect. A wide variety of psychic phenomena may be associated, including illusions, hallucinations, dyscognitive states, and affective experiences. The majority of complex partial seizures (see EPILEPSY, COMPLEX PARTIAL) originate from the temporal lobes. Temporal lobe seizures may be classified by etiology as cryptogenic, familial, or symptomatic (i.e., related to an identified disease process or lesion) (MeSH).[accessedResource: NIFSTD:birnlex_12733][accessDate: 10-05-2010]
Uncinate Epilepsies[accessedResource: MSH:D004833][accessDate: 10-05-2010]
Epilepsies, Temporal Lobe
GeneRIF:12601092
Lateral Temporal Epilepsies
James Malone
Temporal lobe epilepsy (disorder)[accessedResource: DOID:3328][accessDate: 10-05-2010]
DOID:3328
Lateral Temporal Epilepsy[accessedResource: MSH:D004833][accessDate: 10-05-2010]
A localization-related (focal) form of epilepsy characterized by recurrent seizures that arise from foci within the temporal lobe, most commonly from its mesial aspect. A wide variety of psychic phenomena may be associated, including illusions, hallucinations, dyscognitive states, and affective experiences. The majority of complex partial seizures (see EPILEPSY, COMPLEX PARTIAL) originate from the temporal lobes. Temporal lobe seizures may be classified by etiology as cryptogenic, familial, or symptomatic (i.e., related to an identified disease process or lesion). (From Adams et al., Principles of Neurology, 6th ed, p321)
GeneRIF:15672539
GeneRIF:15246112
Benign Psychomotor Epilepsy, Childhood[accessedResource: MSH:D004833][accessDate: 10-05-2010]
GeneRIF:15111672
GeneRIF:15452305
GeneRIF:12686399
temporal lobe epilepsy
Temporal lobe epilepsy (disorder) [Ambiguous][accessedResource: DOID:3328][accessDate: 10-05-2010]
TLE - Temporal lobe epilepsy
GeneRIF:15193619
GeneRIF:15079010
MSH:D004833
SNOMEDCT:193000002
GeneRIF:15245492
GeneRIF:15716416
A localization-related (focal) form of epilepsy characterized by recurrent seizures that arise from foci within the temporal lobe, most commonly from its mesial aspect. A wide variety of psychic phenomena may be associated, including illusions, hallucinations, dyscognitive states, and affective experiences. The majority of complex partial seizures (see EPILEPSY, COMPLEX PARTIAL) originate from the temporal lobes. Temporal lobe seizures may be classified by etiology as cryptogenic, familial, or symptomatic (i.e., related to an identified disease process or lesion). (From Adams et al., Principles of Neurology, 6th ed, p321)[accessedResource: MSH:D004833][accessDate: 10-05-2010]
Psychomotor seizure[accessedResource: SNOMEDCT:193000002][accessDate: 10-05-2010]
GeneRIF:14503638
Epilepsy, Lateral Temporal
GeneRIF:11951051
GeneRIF:15048887
TLE - Temporal lobe epilepsy[accessedResource: SNOMEDCT:193000002][accessDate: 10-05-2010]
GeneRIF:16095760
GeneRIF:14510824
GeneRIF:14643764
GeneRIF:12470703
Temporal lobe epilepsy (disorder)
Uncinate Epilepsy[accessedResource: NIFSTD:birnlex_12733][accessDate: 10-05-2010]
GeneRIF:16254490
GeneRIF:14625043
GeneRIF:15799783
Childhood Benign Psychomotor Epilepsy
GeneRIF:12122039
Temporal Lobe Epilepsies[accessedResource: MSH:D004833][accessDate: 10-05-2010]
A localization-related (focal) form of epilepsy characterized by recurrent seizures that arise from foci within the temporal lobe, most commonly from its mesial aspect. A wide variety of psychic phenomena may be associated, including illusions, hallucinations, dyscognitive states, and affective experiences. The majority of complex partial seizures (see EPILEPSY, COMPLEX PARTIAL) originate from the temporal lobes. Temporal lobe seizures may be classified by etiology as cryptogenic, familial, or symptomatic (i.e., related to an identified disease process or lesion) (MeSH).
Epilepsies, Lateral Temporal[accessedResource: MSH:D004833][accessDate: 10-05-2010]
Uncinate Epilepsy
GeneRIF:12205652
Psychomotor seizure
Tomasz Adamusiak
GeneRIF:15592755
Epilepsies, Uncinate
GeneRIF:15145077
Temporal lobe epilepsy (disorder) [Ambiguous]
F9
Ele Holloway
Mouse cell line
F9 mouse embryonal carcinoma cell line
James Malone
posterior cingulate cortex
James Malone
InChI=1/C5H11NO2S/c1-5(2,9)3(6)4(7)8/h3,9H,6H2,1-2H3,(H,7,8)/t3-/m0/s1/f/h7H
(2S)-2-amino-3-methyl-3-sulfanylbutanoic acid
C5H11NO2S
Cuprimine
penicillaminum
(S)-2-amino-3-mercapto-3-methylbutanoic acid
InChIKey=VVNCNSJFMMFHPL-GFBCBKCJDA
3-sulfanyl-D-valine
(-)-penicillamine
3-mercapto-D-valine
D-beta,beta-dimethylcysteine
Depen
PA
(S)-3,3-dimethylcysteine
D-Penamine
CHEBI:7959
Tomasz Adamusiak
A trisubstituted carboxylic acid with amino, methyl and sulfanyl substituents. Pharmaceutical form (L-form is toxic) of chelating agent used to treat heavy metal poisoning.
Ele Holloway
penicilamina
http://www.ebi.ac.uk/efo/EFO_0002726
D-penicillamine
CC(C)(S)[C@@H](N)C(O)=O
GM12717
James Malone
AntP1
AntP1[accessedResource: FBbt:00005510][accessDate: 10-05-2010]
AntP2[accessedResource: FBbt:00005510][accessDate: 10-05-2010]
antennal primordium[accessedResource: FBbt:00005510][accessDate: 10-05-2010]
FBbt:00005510
antennal primordium
antennal primordium1
.
AntP2
antennal primordium2
James Malone
.[accessedResource: FBbt:00005510][accessDate: 10-05-2010]
antennal primordium2[accessedResource: FBbt:00005510][accessDate: 10-05-2010]
P3 AntOrg
P3 AntOrg[accessedResource: FBbt:00005510][accessDate: 10-05-2010]
Peripheral Blood
SAEL:8
circulating cell[accessedResource: MAT:0000083][accessDate: 10-05-2010]
whole blood
BTO:0000089
A liquid tissue; its major function is to transport oxygen throughout the body. It also supplies the tissues with nutrients, removes waste products, and contains various components of the immune system defending the body against infection. Several hormones also travel in the blood.
A cell which moves among different tissues of the body, via blood, lymph, or other medium.[accessedResource: ZFA:0009043][accessDate: 10-05-2010]
MAT:0000083
blood cells
TAO:0009044
MA:0000059
1: The fluid that circulates in the heart, arteries, capillaries, and veins of a vertebrate animal carrying nourishment and oxygen to and bringing away waste products from all parts of the body.n2: A comparable fluid of an invertebrate.
circulating cells
MO_409
circulating cells[accessedResource: ZFA:0009043][accessDate: 10-05-2010]
Jie Zheng
Peripheral Blood[accessedResource: NCIt:C12434][accessDate: 10-05-2010]
A liquid tissue; its major function is to transport oxygen throughout the body. It also supplies the tissues with nutrients, removes waste products, and contains various components of the immune system defending the body against infection. Several hormones also travel in the blood.[accessedResource: NCIt:C12434][accessDate: 10-05-2010]
blood cells[accessedResource: MAT:0000083][accessDate: 10-05-2010]
James Malone
Reticuloendothelial System, Blood
NCIt:C12434
ZFA:0009043
A cell found predominately in the blood.
blood
A cell found predominately in the blood.[accessedResource: TAO:0009044][accessDate: 10-05-2010]
A cell which moves among different tissues of the body, via blood, lymph, or other medium.
Tomasz Adamusiak
circulating cell
Reticuloendothelial System, Blood[accessedResource: NCIt:C12434][accessDate: 10-05-2010]
1: The fluid that circulates in the heart, arteries, capillaries, and veins of a vertebrate animal carrying nourishment and oxygen to and bringing away waste products from all parts of the body.n2: A comparable fluid of an invertebrate.[accessedResource: BTO:0000089][accessDate: 10-05-2010]
true
milligram per milliliter
A milligram per milliliter is a density unit which is equal to mass of an object in milligrams divided by the volume in milliliters.
http://www.ebi.ac.uk/efo/EFO_0001809
A mass unit density which is equal to mass of an object in milligrams divided by the volume in milliliters.
UO:0000176
mg/ml
James Malone
CL:0000514
satellite cell
A precursor cell destined to differentiate into smooth muscle myocytes.
satellite cell[accessedResource: CL:0000514][accessDate: 10-05-2010]
A precursor cell destined to differentiate into smooth muscle myocytes.[accessedResource: CL:0000514][accessDate: 10-05-2010]
smooth muscle myoblast
Tomasz Adamusiak
double-positive, alpha-beta immature T lymphocyte[accessedResource: CL:0000809][accessDate: 10-05-2010]
CL:0000809
nontransformed thymocyte
DP cell[accessedResource: CL:0000809][accessDate: 10-05-2010]
DP cell
double-positive, alpha-beta thymocyte
DP thymocyte
A thymocyte expressing the alpha-beta T cell receptor complex as well as both the CD4 and CD8 coreceptors.[accessedResource: CL:0000809][accessDate: 10-05-2010]
A thymocyte expressing the alpha-beta T cell receptor complex as well as both the CD4 and CD8 coreceptors.
James Malone
double-positive, alpha-beta immature T lymphocyte
double-positive, alpha-beta thymocyte[accessedResource: CL:0000809][accessDate: 10-05-2010]
CC\\C=C/C[C@@H]1[C@H](CCC1=O)CC(O)=O
(1R,2R)-3-oxo-2-(2Z)-2-penten-ylcyclopentanacetic acid
http://www.ebi.ac.uk/efo/EFO_0001560
Jasmonate
jasmonic acid
CHEBI:18292
InChI=1/C12H18O3/c1-2-3-4-5-10-9(8-12(14)15)6-7-11(10)13/h3-4,9-10H,2,5-8H2,1H3,(H,14,15)/b4-3-/t9-,10-/m1/s1/f/h14H
InChIKey=ZNJFBWYDHIGLCU-JXYCJCKWDR
{(1R,2R)-3-oxo-2-[(2Z)-pent-2-en-1-yl]cyclopentyl}acetic acid
(1R,2R)-3-oxo-2-(pent-2Z-enyl)-cyclopentaneacetic acid
2-{(1R,2R)-3-oxo-2-[(Z)-pent-2-enyl]cyclopentyl}acetate
An oxo monocarboxylic acid that has formula C12H18O3.
C12H18O3
MAT:0000001
animal component
James Malone
InChI=1/C18H24O2/c1-18-9-8-14-13-5-3-12(19)10-11(13)2-4-15(14)16(18)6-7-17(18)20/h3,5,10,14-17,19-20H,2,4,6-9H2,1H3/t14-,15-,16+,17-,18+/m1/s1
http://www.ebi.ac.uk/efo/EFO_0001467
InChIKey=VOXZDWNPVJITMN-SFFUCWETBJ
estra-1,3,5(10)-triene-3,17alpha-diol
C18H24O2
17alpha-estradiol
[H][C@]12CC[C@]3(C)[C@H](O)CC[C@@]3([H])[C@]1([H])CCc1cc(O)ccc21
An estradiol that has formula C18H24O2.
alpha-estradiol
estra-1,3,5(10)trien-3,17alpha-diol
CHEBI:17160
Abnormal cardiac rhythm that is characterized by rapid, uncoordinated firing of electrical impulses in the upper chambers of the heart (HEART ATRIA). In such case, blood cannot be effectively pumped into the lower chambers of the heart (HEART VENTRICLES). It is caused by abnormal impulse generation.[accessedResource: MSH:D001281][accessDate: 10-05-2010]
GeneRIF:12228786
GeneRIF:15028053
GeneRIF:9722616
GeneRIF:15671429
GeneRIF:12824162
GeneRIF:15705965
GeneRIF:14651967
GeneRIF:14574075
GeneRIF:15467744
Fibrillations, Atrial[accessedResource: MSH:D001281][accessDate: 10-05-2010]
GeneRIF:12554751
James Malone
GeneRIF:12920062
atrial fibrillation
auricular fibrillation[accessedResource: DOID:11276][accessDate: 10-05-2010]
Atrial fibrillation (disorder)[accessedResource: SNOMEDCT:49436004][accessDate: 10-05-2010]
MSH:D001281
DOID:11276
Abnormal cardiac rhythm that is characterized by rapid, uncoordinated firing of electrical impulses in the upper chambers of the heart (HEART ATRIA). In such case, blood cannot be effectively pumped into the lower chambers of the heart (HEART VENTRICLES). It is caused by abnormal impulse generation.
GeneRIF:15459252
GeneRIF:15289369
GeneRIF:15297374
GeneRIF:14678810
SNOMEDCT:49436004
GeneRIF:11748095
GeneRIF:15610520
AF - Atrial fibrillation[accessedResource: SNOMEDCT:49436004][accessDate: 10-05-2010]
Auricular Fibrillations
GeneRIF:16301177
GeneRIF:11839628
GeneRIF:15249499
GeneRIF:12089346
GeneRIF:16377932
Fibrillations, Auricular[accessedResource: MSH:D001281][accessDate: 10-05-2010]
GeneRIF:12205093
auricular fibrillation
Atrial fibrillation (disorder)
GeneRIF:15023884
GeneRIF:12607777
GeneRIF:12808105
GeneRIF:12093745
GeneRIF:15368194
GeneRIF:12522251
AF - Atrial fibrillation
GeneRIF:15922306
GeneRIF:12154005
ICD9:427.31
GeneRIF:14652651
GeneRIF:11956217
Atrial Fibrillations
http://www.ebi.ac.uk/efo/EFO_0001814
A unit of molarity which is equal to 10^[-15] M.
Tomasz Adamusiak
true
femtomolar
Jie Zheng
MO_898
fM
James Malone
MAT:0000495
Suprarenal medulla[accessedResource: FMAID:15633][accessDate: 10-05-2010]
XAO:0000166
Medulla of suprarenal gland[accessedResource: FMAID:15633][accessDate: 10-05-2010]
Medulla of suprarenal gland
EMAPA:18428
The inner, reddish-brown portion of the adrenal glands that synthesizes, stores, and releases epinephrine and norepinephrine.[accessedResource: BTO:0000049][accessDate: 10-05-2010]
Medulla of adrenal gland[accessedResource: FMAID:15633][accessDate: 10-05-2010]
The inner, reddish-brown portion of the adrenal glands that synthesizes, stores, and releases epinephrine and norepinephrine.
EV:0100135
MA:0000119
FMAID:15633
Medulla of adrenal gland
Suprarenal medulla
Medulla (Glandula suprarenalis)
BTO:0000049
adrenal medulla
Medulla (Glandula suprarenalis)[accessedResource: FMAID:15633][accessDate: 10-05-2010]
James Malone
A SKBR3 is a cell line.
A SKBR3 is all of the following: something that is bearer of a breast carcinoma, something that derives from
an epithelial cell, and something that derives from a mammary gland.
Natural Language Generator 8th April 2010
SKBR3
James Malone
true
umol/L
micromole per litre
micromole per liter
James Malone
MA:0000276
EHDAA:4757
TADS:0000551
SAEL:91
BTO:0001175
EMAPA:17168
Inner layer of eyeball
The array of photoreceptors and the cells that support them in a compound eye.
The array of photoreceptors and the cells that support them in a compound eye.[accessedResource: FBbt:00004200][accessDate: 10-05-2010]
The portion of the eye developing from the optic primordium and including the neural retina and the retinal pigment layer. Kimmel et al, 1995.
retinas[accessedResource: ZFA:0000152][accessDate: 10-05-2010]
Multi-tissue structure that contains the retinal neural layer and the retinal pigmented epithelium, and develops from the optic cup.
NIFSTD:birnlex_1153
FMAID:58301
Layer of wall of eyeball which is continuous with optic nerve.
Inner layer of eyeball[accessedResource: FMAID:58301][accessDate: 10-05-2010]
MFO:0003600
The array of photoreceptors & the cells that support them in a compound eye.
FBbt:00004200
The portion of the eye developing from the optic primordium and including the neural retina and the retinal pigment layer. Kimmel et al, 1995.[accessedResource: TAO:0000152][accessDate: 10-05-2010]
retina structure
Tunica interna of eyeball
James Malone
Multi-tissue structure that contains the retinal neural layer and the retinal pigmented epithelium, and develops from the optic cup.[accessedResource: ZFA:0000152][accessDate: 10-05-2010]
ZFA:0000152
Tomasz Adamusiak
MAT:0000142
Layer of wall of eyeball which is continuous with optic nerve.[accessedResource: FMAID:58301][accessDate: 10-05-2010]
Tunica interna of eyeball[accessedResource: FMAID:58301][accessDate: 10-05-2010]
The sensory membrane that lines the eye, is composed of several layers including one containing the rods and cones, and functions as the immediate instrument of vision by receiving the image formed by the lens and converting it into chemical and nervous signals which reach the brain by way of the optic nerve.[accessedResource: BTO:0001175][accessDate: 10-05-2010]
TAO:0000152
Retina
retina[accessedResource: ZFA:0000152][accessDate: 10-05-2010]
XAO:0000009
retinas
EV:0100348
The sensory membrane that lines the eye, is composed of several layers including one containing the rods and cones, and functions as the immediate instrument of vision by receiving the image formed by the lens and converting it into chemical and nervous signals which reach the brain by way of the optic nerve.
ZEA:0015084
PO:0020126
female inflorescence
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158568&type=germplasm
CS57544 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158568&type=germplasm
CS57544
James Malone
digit
forelimb digit
hindlimb digit
XAO:0003035
hindlimb digit[accessedResource: MAT:0000285][accessDate: 10-05-2010]
James Malone
SAEL:29
forelimb digit[accessedResource: MAT:0000285][accessDate: 10-05-2010]
XAO:0003036
MAT:0000285
Neoplasia[accessedResource: NCIt:C3262][accessDate: 10-05-2010]
An abnormal tissue growth resulted from uncontrolled cell proliferation. Benign neoplastic cells resemble normal cells without exhibiting significant cytologic atypia, while malignant ones exhibit overt signs such as dysplastic features, atypical mitotic figures, necrosis, nuclear pleomorphism, and anaplasia. Representative examples of benign neoplasms include papillomas, cystadenomas, and lipomas; malignant neoplasms include carcinomas, sarcomas, lymphomas, and leukemias.
NEOPLASMS BENIGN, MALIGNANT AND UNSPECIFIED (INCL CYSTS AND POLYPS)[accessedResource: NCIt:C3262][accessDate: 10-05-2010]
An abnormal tissue growth resulted from uncontrolled cell proliferation.
neoplasm
A benign or malignant tissue growth resulting from uncontrolled cell proliferation. Benign neoplastic cells resemble normal cells without exhibiting significant cytologic atypia, while malignant cells exhibit overt signs such as dysplastic features, atypical mitotic figures, necrosis, nuclear pleomorphism, and anaplasia. Representative examples of benign neoplasms include papillomas, cystadenomas, and lipomas; malignant neoplasms include carcinomas, sarcomas, lymphomas, and leukemias.[accessedResource: NCIt:C3262][accessDate: 10-05-2010]
Neoplastic Growth
Tumor[accessedResource: NCIt:C3262][accessDate: 10-05-2010]
Neoplasms
Neoplastic Growth[accessedResource: NCIt:C3262][accessDate: 10-05-2010]
NCIt:C3262
James Malone
Neoplasms[accessedResource: NCIt:C3262][accessDate: 10-05-2010]
Tumor
A benign or malignant tissue growth resulting from uncontrolled cell proliferation. Benign neoplastic cells resemble normal cells without exhibiting significant cytologic atypia, while malignant cells exhibit overt signs such as dysplastic features, atypical mitotic figures, necrosis, nuclear pleomorphism, and anaplasia. Representative examples of benign neoplasms include papillomas, cystadenomas, and lipomas; malignant neoplasms include carcinomas, sarcomas, lymphomas, and leukemias.
Neoplasia
NEOPLASMS BENIGN, MALIGNANT AND UNSPECIFIED (INCL CYSTS AND POLYPS)
CL:0000371
The cell protoplasm after removal of the cell wall.
The cell protoplasm after removal of the cell wall.[accessedResource: CL:0000371][accessDate: 10-05-2010]
protoplast
Tomasz Adamusiak
A sensory system disease is a disease which has as location the sensory system.
sensory system disease
James Malone
stem cell derived cell line
vitaminas
vitamin
CHEBI:33229
James Malone
vitamines
vitamine
vitamina
vitaminum
http://www.ebi.ac.uk/efo/EFO_0001831
vitamines
vitamins
GeneRIF:12860835
GeneRIF:15146954
GeneRIF:14701907
GeneRIF:14616762
SNOMEDCT:195537001
GeneRIF:12975385
GeneRIF:14697241
GeneRIF:15864120
GeneRIF:12566942
GeneRIF:12030900
GeneRIF:12443993
GeneRIF:15756929
GeneRIF:11803452
GeneRIF:15076153
GeneRIF:11792466
GeneRIF:11799081
GeneRIF:14633140
GeneRIF:11877320
ICD9:401-405.99
GeneRIF:12642508
DOID:10763
GeneRIF:15452033
GeneRIF:14736842
GeneRIF:14597849
(hypertensive disease) or (hypertension)[accessedResource: DOID:10763][accessDate: 10-05-2010]
GeneRIF:12172320
GeneRIF:12482634
GeneRIF:12023681
GeneRIF:11984003
GeneRIF:15048641
SURG COMP - HYPERTENSION
GeneRIF:15579504
GeneRIF:16115038
GeneRIF:16216916
GeneRIF:15596575
GeneRIF:15076188
GeneRIF:11849458
HTN - hypertension[accessedResource: DOID:10763][accessDate: 10-05-2010]
Hypertensive disease (disorder)
GeneRIF:12372003
GeneRIF:12399948
GeneRIF:15117826
GeneRIF:14514639
GeneRIF:15613621
GeneRIF:15950062
GeneRIF:12122115
GeneRIF:12023056
GeneRIF:12569260
GeneRIF:12388212
GeneRIF:15458945
GeneRIF:15121838
GeneRIF:15743788
GeneRIF:12025958
GeneRIF:15452029
GeneRIF:15797659
High blood pressure (& [essential hypertension])[accessedResource: DOID:10763][accessDate: 10-05-2010]
GeneRIF:12746411
GeneRIF:15662219
GeneRIF:11821707
GeneRIF:15563533
GeneRIF:15866055
GeneRIF:14622117
GeneRIF:12639805
(hypertensive disease) or (hypertension)
GeneRIF:15640278
GeneRIF:15766329
GeneRIF:14752100
High Blood Pressure[accessedResource: MSH:D006973][accessDate: 10-05-2010]
GeneRIF:15055249
GeneRIF:11882596
GeneRIF:14744461
GeneRIF:12878376
GeneRIF:12105146
GeneRIF:15042429
GeneRIF:14718360
GeneRIF:15920074
GeneRIF:15671602
GeneRIF:12536339
GeneRIF:12391843
GeneRIF:14643573
GeneRIF:12397037
GeneRIF:15097232
GeneRIF:15100095
GeneRIF:12730030
GeneRIF:12924622
GeneRIF:11986365
GeneRIF:14551242
GeneRIF:15738350
hyperpiesia
Persistently high systemic arterial BLOOD PRESSURE. Based on multiple readings (BLOOD PRESSURE DETERMINATION), hypertension is currently defined as when SYSTOLIC PRESSURE is consistently greater than 140 mm Hg or when DIASTOLIC PRESSURE is consistently 90 mm Hg or more.
GeneRIF:12782219
GeneRIF:15340111
GeneRIF:12511547
GeneRIF:11840488
GeneRIF:16132104
hypertensive disease NOS (disorder)
GeneRIF:12165748
GeneRIF:12566941
GeneRIF:16091581
GeneRIF:11864924
GeneRIF:14553964
GeneRIF:16166162
GeneRIF:16027245
Blood Pressure, High
GeneRIF:15583131
GeneRIF:15935077
GeneRIF:14515335
GeneRIF:12072411
GeneRIF:12476421
GeneRIF:16103266
GeneRIF:15797740
GeneRIF:15993631
GeneRIF:14697676
GeneRIF:12511523
GeneRIF:16230521
GeneRIF:15738346
GeneRIF:15110905
GeneRIF:12771048
GeneRIF:14993194
GeneRIF:14654758
GeneRIF:12484509
GeneRIF:12213905
GeneRIF:12574109
GeneRIF:15480095
GeneRIF:12506509
GeneRIF:16115223
GeneRIF:15195688
GeneRIF:15914769
GeneRIF:15956775
GeneRIF:15775784
GeneRIF:15621007
GeneRIF:12117726
GeneRIF:12388782
HTN[accessedResource: DOID:10763][accessDate: 10-05-2010]
MSH:D006973
GeneRIF:15489962
GeneRIF:15106800
GeneRIF:11924719
GeneRIF:11833851
GeneRIF:12695524
hypertensive disease[accessedResource: DOID:10763][accessDate: 10-05-2010]
GeneRIF:15890973
GeneRIF:15662218
GeneRIF:12677022
James Malone
GeneRIF:12729892
GeneRIF:15887114
[X]Hypertensive diseases (disorder)[accessedResource: SNOMEDCT:195537001][accessDate: 10-05-2010]
GeneRIF:12884521
GeneRIF:16172428
Hypertensive disease NOS[accessedResource: SNOMEDCT:194794002][accessDate: 10-05-2010]
GeneRIF:12011775
High Blood Pressures
GeneRIF:12460053
GeneRIF:12544440
GeneRIF:12670745
GeneRIF:15037565
GeneRIF:15050533
GeneRIF:15831367
GeneRIF:15141213
GeneRIF:15015152
GeneRIF:16209130
GeneRIF:15471983
GeneRIF:15975728
GeneRIF:11988231
GeneRIF:12484516
GeneRIF:14621190
SNOMEDCT:194794002
GeneRIF:15716853
GeneRIF:12627873
GeneRIF:15554460
GeneRIF:15201549
GeneRIF:15020309
GeneRIF:12484512
GeneRIF:12669427
GeneRIF:15451779
GeneRIF:15146952
GeneRIF:12719438
GeneRIF:14719182
GeneRIF:16221215
Persistently high systemic arterial BLOOD PRESSURE. Based on multiple readings (BLOOD PRESSURE DETERMINATION), hypertension is currently defined as when SYSTOLIC PRESSURE is consistently greater than 140 mm Hg or when DIASTOLIC PRESSURE is consistently 90 mm Hg or more.[accessedResource: MSH:D006973][accessDate: 10-05-2010]
GeneRIF:16051894
GeneRIF:15148501
GeneRIF:15194301
GeneRIF:12133472
GeneRIF:12145290
GeneRIF:16286571
GeneRIF:15896881
GeneRIF:15726836
GeneRIF:11952164
GeneRIF:15784171
GeneRIF:16037544
GeneRIF:15253101
GeneRIF:12181435
GeneRIF:15302839
GeneRIF:15886479
GeneRIF:15054141
GeneRIF:12457738
GeneRIF:14969735
GeneRIF:11976386
GeneRIF:12192616
GeneRIF:14506074
High blood pressure (& [essential hypertension])
GeneRIF:12732339
GeneRIF:12359981
GeneRIF:14693679
GeneRIF:12751759
GeneRIF:14967839
GeneRIF:15480094
GeneRIF:15994241
GeneRIF:12013496
SURG COMP - HYPERTENSION[accessedResource: ICD9:997.91][accessDate: 10-05-2010]
GeneRIF:11800057
GeneRIF:12244304
GeneRIF:12452334
GeneRIF:15967869
GeneRIF:15699473
GeneRIF:12844513
GeneRIF:14653307
GeneRIF:12218313
GeneRIF:12297007
GeneRIF:12450315
GeneRIF:15075196
GeneRIF:15492474
GeneRIF:12925562
GeneRIF:16115032
hypertension NOS
GeneRIF:14604995
GeneRIF:12468106
GeneRIF:15340103
GeneRIF:15831363
GeneRIF:15479166
GeneRIF:16203874
GeneRIF:11798846
GeneRIF:15469887
GeneRIF:15659047
GeneRIF:12364355
GeneRIF:15059935
GeneRIF:12566855
GeneRIF:15314687
GeneRIF:16172427
GeneRIF:16280269
GeneRIF:12050272
GeneRIF:15311109
GeneRIF:14506400
GeneRIF:16103269
hypertensive disease
GeneRIF:14742306
GeneRIF:16130282
GeneRIF:11880335
GeneRIF:15162499
GeneRIF:15809361
GeneRIF:15942458
GeneRIF:14707164
GeneRIF:15363817
GeneRIF:15850776
GeneRIF:12390711
hypertension
GeneRIF:16144986
GeneRIF:15304560
GeneRIF:16243970
GeneRIF:14499437
GeneRIF:12529502
GeneRIF:15598876
GeneRIF:12372791
GeneRIF:15773229
GeneRIF:15554451
[X]Hypertensive diseases
GeneRIF:12021582
GeneRIF:15758045
GeneRIF:12775885
hypertensive disease (disorder)[accessedResource: DOID:10763][accessDate: 10-05-2010]
GeneRIF:12480131
GeneRIF:12646192
GeneRIF:15126519
GeneRIF:15055253
GeneRIF:15244100
GeneRIF:15123570
GeneRIF:14688210
GeneRIF:14744925
GeneRIF:12911547
GeneRIF:15545843
GeneRIF:15638826
GeneRIF:12644270
GeneRIF:15944206
GeneRIF:15746214
GeneRIF:12518270
GeneRIF:15905889
GeneRIF:12968128
GeneRIF:14608379
GeneRIF:15678704
GeneRIF:15198480
GeneRIF:13679998
GeneRIF:15131114
GeneRIF:12754175
GeneRIF:14698468
GeneRIF:12950120
GeneRIF:14573316
hyperpiesia[accessedResource: DOID:10763][accessDate: 10-05-2010]
GeneRIF:12215468
GeneRIF:14618677
GeneRIF:16097364
GeneRIF:15292344
ICD9:997.91
GeneRIF:14699441
hypertensive disease NOS
GeneRIF:15728438
GeneRIF:15824199
GeneRIF:15831362
GeneRIF:12452325
GeneRIF:12817181
GeneRIF:12215464
Vascular Hypertensive disorder
GeneRIF:15643128
GeneRIF:11903302
GeneRIF:12865163
GeneRIF:15726642
hypertension NOS[accessedResource: DOID:10763][accessDate: 10-05-2010]
GeneRIF:12215473
GeneRIF:15076154
GeneRIF:14568996
GeneRIF:16280279
GeneRIF:11872379
HTN
GeneRIF:15996002
GeneRIF:14499940
GeneRIF:12429873
GeneRIF:11910303
GeneRIF:12742250
GeneRIF:12515852
GeneRIF:15498966
GeneRIF:15824463
GeneRIF:12706259
GeneRIF:15699451
GeneRIF:15753233
GeneRIF:11882615
[X]Hypertensive diseases[accessedResource: SNOMEDCT:195537001][accessDate: 10-05-2010]
GeneRIF:12419325
GeneRIF:14621188
GeneRIF:12670743
GeneRIF:12867255
GeneRIF:11882590
[X]Hypertensive diseases (disorder)
GeneRIF:15927846
GeneRIF:12446729
GeneRIF:15076189
GeneRIF:14988405
GeneRIF:16003175
GeneRIF:15190056
Hypertensive disease NOS (disorder)[accessedResource: SNOMEDCT:194794002][accessDate: 10-05-2010]
GeneRIF:15193619
GeneRIF:12872043
GeneRIF:15316241
HTN - hypertension
GeneRIF:15837834
GeneRIF:15737640
GeneRIF:14620922
GeneRIF:16377929
GeneRIF:15146950
GeneRIF:14970360
GeneRIF:12217425
GeneRIF:15611369
GeneRIF:12648304
GeneRIF:15059929
GeneRIF:12429553
GeneRIF:15233982
GeneRIF:15809299
GeneRIF:15894833
GeneRIF:15809359
GeneRIF:11956157
GeneRIF:11692154
GeneRIF:15136501
GeneRIF:15475025
GeneRIF:14744462
GeneRIF:12891286
GeneRIF:12540629
GeneRIF:16012192
GeneRIF:15908963
Blood Pressures, High[accessedResource: MSH:D006973][accessDate: 10-05-2010]
GeneRIF:15928032
vascular hypertensive disorder[accessedResource: DOID:10763][accessDate: 10-05-2010]
GeneRIF:14515341
GeneRIF:12032592
GeneRIF:12130711
GeneRIF:15966738
GeneRIF:15078565
GeneRIF:15097233
GeneRIF:15201550
GeneRIF:14871557
GeneRIF:11926353
GeneRIF:15952872
GeneRIF:15498972
GeneRIF:14966368
GeneRIF:16144989
GeneRIF:15480097
SCH
James Malone
Ele Holloway
Oligodendroglioma, anaplastic (morphologic abnormality)
Undifferentiated Oligodendroglioma
James Malone
anaplastic oligodendroglioma
DOID:7154
Undifferentiated Oligodendroglioma[accessedResource: DOID:7154][accessDate: 10-05-2010]
Oligodendroglioma, anaplastic (morphologic abnormality)[accessedResource: DOID:7154][accessDate: 10-05-2010]
Ele Holloway
HaCaT
James Malone
Ele Holloway
Dimorphous Leprosies[accessedResource: MSH:D015439][accessDate: 10-05-2010]
A form of LEPROSY in which there are clinical manifestations of both principal types (lepromatous and tuberculoid). The disease may shift toward one of these two polar or principal forms.[accessedResource: MSH:D015439][accessDate: 10-05-2010]
Borderline leprosy (disorder)[accessedResource: SNOMEDCT:400008009][accessDate: 10-05-2010]
Leprosy, Dimorphous
Leprosies, Borderline[accessedResource: MSH:D015439][accessDate: 10-05-2010]
DOID:1023
Borderline or dimorphous leprosy
Midborderline leprosy[accessedResource: SNOMEDCT:400154003][accessDate: 10-05-2010]
ICD9:030.3
Midborderline leprosy (disorder)
Group B leprosy[accessedResource: SNOMEDCT:400008009][accessDate: 10-05-2010]
Type BB leprosy
Midborderline leprosy (disorder)[accessedResource: SNOMEDCT:400154003][accessDate: 10-05-2010]
A form of LEPROSY in which there are clinical manifestations of both principal types (lepromatous and tuberculoid). The disease may shift toward one of these two polar or principal forms.
James Malone
Borderline leprosy [group B][accessedResource: DOID:1023][accessDate: 10-05-2010]
SNOMEDCT:400154003
BB - Borderline leprosy[accessedResource: SNOMEDCT:400154003][accessDate: 10-05-2010]
Borderline Leprosies
Borderline leprosy [group B]
SNOMEDCT:400008009
Dimorphous Leprosy[accessedResource: MSH:D015439][accessDate: 10-05-2010]
Type BB leprosy[accessedResource: SNOMEDCT:400154003][accessDate: 10-05-2010]
borderline leprosy
Borderline leprosy (disorder)
Borderline or dimorphous leprosy[accessedResource: DOID:1023][accessDate: 10-05-2010]
Midborderline leprosy
Group B leprosy
BB - Borderline leprosy
MSH:D015439
Leprosies, Dimorphous
ZFA:0000003
adaxial cell
adaxial cell[accessedResource: ZFA:0000003][accessDate: 10-05-2010]
adaxial cells
James Malone
A heart component is an animal component that is part of some heart.
heart component
James Malone
cerebral spinal fluid[accessedResource: BTO:0000237][accessDate: 10-05-2010]
CSF[accessedResource: BTO:0000237][accessDate: 10-05-2010]
cerebrospinal fluid
spinal fluid
The serumlike fluid that circulates through the ventricles of the brain, the cavity of the spinal cord, and the subarachnoid space, functioning in shock absorption.
CSF
The fluid that is contained within the brain ventricles, the subarachnoid space and the central canal of the spinal cord.
The fluid that is contained within the brain ventricles, the subarachnoid space and the central canal of the spinal cord.[accessedResource: NCIt:C12692][accessDate: 10-05-2010]
cerebral spinal fluid
NCIt:C12692
spinal fluid[accessedResource: BTO:0000237][accessDate: 10-05-2010]
BTO:0000237
James Malone
The serumlike fluid that circulates through the ventricles of the brain, the cavity of the spinal cord, and the subarachnoid space, functioning in shock absorption.[accessedResource: BTO:0000237][accessDate: 10-05-2010]
event free survival time
James Malone
InChIKey=XYNPYHXGMWJBLV-VXPJTDKGBR
(3beta,5alpha,22beta,25S)-spirosolan-3-ol
5alpha-tomatidan-3beta-ol
(22S,25S)-5alpha-spirosolan-3beta-ol
Tomatidin
C27H45NO2
http://www.ebi.ac.uk/efo/EFO_0001627
[H][C@@]12CC[C@]3([H])[C@]([H])(CC[C@@]4(C)[C@@]3([H])C[C@]3([H])O[C@@]5(CC[C@H](C)CN5)[C@@H](C)[C@]43[H])[C@@]1(C)CC[C@H](O)C2
InChI=1/C27H45NO2/c1-16-7-12-27(28-15-16)17(2)24-23(30-27)14-22-20-6-5-18-13-19(29)8-10-25(18,3)21(20)9-11-26(22,24)4/h16-24,28-29H,5-15H2,1-4H3/t16-,17-,18-,19-,20+,21-,22-,23-,24-,25-,26-,27-/m0/s1
tomatidine
CHEBI:9629
Jie Zheng
Tomasz Adamusiak
James Malone
The stage or progression of a disease in an organism. Includes pathological staging of cancers and other disease progression. E.g. Dukes C stage describing colon cancer
disease staging
Dukes C stage describing colon cancer
MO_792
CHEBI:16412
lipopolysaccharides
LPS
http://www.ebi.ac.uk/efo/EFO_0001564
Natural compounds consisting of a trisaccharide repeating unit (two heptose units and octulosonic acid) with oligosaccharide side chains and 3-hydroxytetradecanoic acid units (they are a major constituent of the cell walls of Gram-negative bacteria).
lipopolysaccharide
http://jaxmice.jax.org/strain/009290.html
ILSXISS107/TejJ
Tomasz Adamusiak
MO_689
Tomasz Adamusiak
Jie Zheng
true
A femtomole is a substance unit equal to 10^-15 mol.
James Malone
http://www.ebi.ac.uk/efo/EFO_0001797
A substance unit equal to 10^[-15] mol.
fmol
femtomole
3beta-hydroxy-20-oxopregn-5-ene-16alpha-carbonitrile
A nitrile that has formula C22H31NO2.
PCN
3beta-hydroxy-20-oxo-5-pregnene-16alpha-carbonitrile
[H][C@@]12CC=C3C[C@@H](O)CC[C@]3(C)[C@@]1([H])CC[C@]1(C)[C@H]([C@@H](C[C@@]21[H])C#N)C(C)=O
CHEBI:35591
http://www.ebi.ac.uk/efo/EFO_0001596
InChI=1/C22H31NO2/c1-13(24)20-14(12-23)10-19-17-5-4-15-11-16(25)6-8-21(15,2)18(17)7-9-22(19,20)3/h4,14,16-20,25H,5-11H2,1-3H3/t14-,16-,17+,18-,19-,20-,21-,22-/m0/s1
C22H31NO2
pregnenolone 16alpha-carbonitrile
InChIKey=VSBHRRMYCDQLJF-ZDNYCOCVBP
pregnenolone carbonitrile
liver endoderm
Tomasz Adamusiak
Jie Zheng
Optic Nerve Head
Optic Papilla
James Malone
Optic Papilla[accessedResource: NCIt:C12760][accessDate: 10-05-2010]
NCIt:C12760
optic disc
Optic Disk[accessedResource: NCIt:C12760][accessDate: 10-05-2010]
FMA:58634
Optic Nerve Head[accessedResource: NCIt:C12760][accessDate: 10-05-2010]
A portion of the retina at which the axons of the ganglion cells exit the eyeball to form the optic nerve. No light-sensitive photoreceptors are contained within this portion of the retina.[accessedResource: NCIt:C12760][accessDate: 10-05-2010]
A portion of the retina at which the axons of the ganglion cells exit the eyeball to form the optic nerve. No light-sensitive photoreceptors are contained within this portion of the retina.
Optic Disk
NIH3T3
James Malone
Lymphomas Non-Hodgkin's B-Cell
B-Cell Non-Hodgkin Lymphoma
peripheral B-cell neoplasm
B-Cell Non-Hodgkin's Lymphoma
C3457
B-Cell Non-Hodgkin Lymphoma[accessedResource: C3457][accessDate: 10-05-2010]
The most common type of non-Hodgkin lymphoma. It includes the most frequently seen morphologic variants which are: diffuse large B-cell lymphoma, follicular lymphoma, small lymphocytic lymphoma and marginal zone B-cell lymphoma. -- 2003
B-cell lymphoma
The most common type of non-Hodgkin lymphoma. It includes the most frequently seen morphologic variants which are: diffuse large B-cell lymphoma, follicular lymphoma, small lymphocytic lymphoma and marginal zone B-cell lymphoma. -- 2003[accessedResource: C3457][accessDate: 10-05-2010]
Lymphomas Non-Hodgkin's B-Cell[accessedResource: C3457][accessDate: 10-05-2010]
neoplasm of mature B-cells
Non-Hodgkin's Lymphoma B-Cell[accessedResource: C3457][accessDate: 10-05-2010]
James Malone
FMA:61857
James Malone
Marginal gyrus[accessedResource: FMA:61857][accessDate: 10-05-2010]
superior frontal gyrus
Marginal gyrus
Superior frontal convolution
Superior frontal convolution[accessedResource: FMA:61857][accessDate: 10-05-2010]
GeneRIF:15385448
Leyden-Mbius muscular dystrophy
limb-girdle muscular dystrophies
Erb's muscular dystrophy
A heterogenous group of inherited muscular dystrophy that can be autosomal dominant or autosomal recessive. There are many forms (called LGMDs) involving genes encoding muscle membrane proteins such as the sarcoglycan (SARCOGLYCANS) complex that interacts with DYSTROPHIN. The disease is characterized by progressing wasting and weakness of the proximal muscles of arms and legs around the HIPS and SHOULDERS (the pelvic and shoulder girdles).
GeneRIF:16344347
GeneRIF:15087111
Limb-girdle muscular dystrophy (disorder)
SNOMEDCT:93153005
GeneRIF:11891182
Leyden-Mbius muscular dystrophy[accessedResource: DOID:11724][accessDate: 10-05-2010]
GeneRIF:14981167
Leyden-Mobius muscular dystrophy[accessedResource: SNOMEDCT:93153005][accessDate: 10-05-2010]
limb-girdle muscular dystrophy
GeneRIF:11822024
Leyden-Möbius muscular dystrophy
James Malone
Limb-Girdle Muscular Dystrophies[accessedResource: MSH:D049288][accessDate: 10-05-2010]
Leyden-Möbius muscular dystrophy[accessedResource: SNOMEDCT:93153005][accessDate: 10-05-2010]
A heterogenous group of inherited muscular dystrophy that can be autosomal dominant or autosomal recessive. There are many forms (called LGMDs) involving genes encoding muscle membrane proteins such as the sarcoglycan (SARCOGLYCANS) complex that interacts with DYSTROPHIN. The disease is characterized by progressing wasting and weakness of the proximal muscles of arms and legs around the HIPS and SHOULDERS (the pelvic and shoulder girdles).[accessedResource: MSH:D049288][accessDate: 10-05-2010]
GeneRIF:15351423
GeneRIF:12499399
Limb-girdle muscular dystrophy (disorder)[accessedResource: SNOMEDCT:93153005][accessDate: 10-05-2010]
DOID:11724
GeneRIF:12428213
GeneRIF:11741828
GeneRIF:14600260
Leyden-Mobius muscular dystrophy
MSH:D049288
GeneRIF:12032588
DMS114
DMS 114
Ele Holloway
DMS
-114
James Malone
CL:0000333
A cell of the strip of specialized ectoderm flanking each side of the embryonal neural plate, which after the closure of the neural tube, forms a column of isolated cells along the dorsal aspect of the neural tube. Most of the cranial and all of the spinal sensory ganglion cells arise by differentiation of neural crest cells.
A cell of the strip of specialized ectoderm flanking each side of the embryonal neural plate, which after the closure of the neural tube, forms a column of isolated cells along the dorsal aspect of the neural tube. Most of the cranial and all of the spinal sensory ganglion cells arise by differentiation of neural crest cells.[accessedResource: CL:0000333][accessDate: 10-05-2010]
neural crest cell
James Malone
NCIH1666
James Malone
Ele Holloway
mesoblast[accessedResource: CL:0000222][accessDate: 10-05-2010]
mesoderm cell
mesoblast
mesodermal cell
A cell of the middle germ layer of the embryo.[accessedResource: CL:0000222][accessDate: 10-05-2010]
CL:0000222
mesoderm cell[accessedResource: CL:0000222][accessDate: 10-05-2010]
James Malone
A cell of the middle germ layer of the embryo.
The fifth set of paired nerves of the face that emerge from the brain steam. These nerves have sensory and motor functions in the face, oral cavity, and nasal cavity.
NCIt:C12806
trigeminus[accessedResource: BTO:0001072][accessDate: 10-05-2010]
Fifth Cranial Nerve[accessedResource: NCIt:C12806][accessDate: 10-05-2010]
The fifth set of paired nerves of the face that emerge from the brain steam. These nerves have sensory and motor functions in the face, oral cavity, and nasal cavity.[accessedResource: NCIt:C12806][accessDate: 10-05-2010]
Nervus Trigeminus
Fifth Cranial Nerve
trigeminal nerve
James Malone
trigeminus
Either of the fifth pair of cranial nerves, having sensory and motor functions in the face, teeth, mouth, and nasal cavity.[accessedResource: BTO:0001072][accessDate: 10-05-2010]
Either of the fifth pair of cranial nerves, having sensory and motor functions in the face, teeth, mouth, and nasal cavity.
Nervus Trigeminus[accessedResource: NCIt:C12806][accessDate: 10-05-2010]
BTO:0001072
Cranial Nerve V[accessedResource: NCIt:C12806][accessDate: 10-05-2010]
Cranial Nerve V
OV90
James Malone
Ele Holloway
MDAMB134VI
James Malone
(E)-(+-)-beta-((4-chlorophenyl)methylene)-alpha-(1,1-dimethylethyl)-1H-1,2,4-triazole-1-ethanol
uniconazole
C15H18ClN3O
(1E)-1-(4-chlorophenyl)-4,4-dimethyl-2-(1H-1,2,4-triazol-1-yl)pent-1-en-3-ol
InChI=1/C15H18ClN3O/c1-15(2,3)14(20)13(19-10-17-9-18-19)8-11-4-6-12(16)7-5-11/h4-10,14,20H,1-3H3/b13-8+
InChIKey=YNWVFADWVLCOPU-MDWZMJQEBY
A secondary alcohol that has formula C15H18ClN3O.
uniconazole-P
CHEBI:38000
http://www.ebi.ac.uk/efo/EFO_0001633
CC(C)(C)C(O)C(\\n1cncn1)=C/c1ccc(Cl)cc1
Encephalitis/myelitis NOS (disorder)
DOID:640
encephalomyelitis
Myeloencephalitis[accessedResource: MSH:D004679][accessDate: 10-05-2010]
GeneRIF:15310853
Encephalitis &/or myelitis
Encephalitis/myelitis NOS[accessedResource: DOID:640][accessDate: 10-05-2010]
INFLAMM ENCEPH[accessedResource: MSH:D004679][accessDate: 10-05-2010]
MSH:D004679
Encephalitis/myelitis NOS (disorder)[accessedResource: DOID:640][accessDate: 10-05-2010]
Encephalomyelitis NOS
Encephalitis/myelitis NOS
Encephalomyelitis (disorder)
Encephalomyelitis, Inflammatory
SNOMEDCT:62950007
NCIt:C34580
Myeloencephalitis
GeneRIF:12496452
SNOMEDCT:230196000
MYELOENCEPH
ENCEPH INFLAMM
Inflammatory Encephalomyelitis[accessedResource: MSH:D004679][accessDate: 10-05-2010]
Encephalitis &/or myelitis[accessedResource: DOID:640][accessDate: 10-05-2010]
Myeloencephalitides[accessedResource: MSH:D004679][accessDate: 10-05-2010]
Encephalomyelitis, NOS[accessedResource: SNOMEDCT:62950007][accessDate: 10-05-2010]
Encephalomyelitis NOS (disorder)[accessedResource: SNOMEDCT:230196000][accessDate: 10-05-2010]
A general term indicating inflammation of the BRAIN and SPINAL CORD, often used to indicate an infectious process, but also applicable to a variety of autoimmune and toxic-metabolic conditions. There is significant overlap regarding the usage of this term and ENCEPHALITIS in the literature.[accessedResource: MSH:D004679][accessDate: 10-05-2010]
Encephalomyelitis (disorder)[accessedResource: DOID:640][accessDate: 10-05-2010]
Encephalomyelitis NOS (disorder)
MYELOENCEPH[accessedResource: MSH:D004679][accessDate: 10-05-2010]
A general term indicating inflammation of the BRAIN and SPINAL CORD, often used to indicate an infectious process, but also applicable to a variety of autoimmune and toxic-metabolic conditions. There is significant overlap regarding the usage of this term and ENCEPHALITIS in the literature.
Myeloencephalitides
James Malone
GeneRIF:15221958
GeneRIF:12452048
DOID:3905
Lung Cancer
GeneRIF:15086519
A carcinoma originating in the lung. Lung carcinomas usually arise from the epithelium that lines the bronchial tree (bronchogenic carcinomas), and are classified as small cell or non-small cell carcinomas. Non-small cell lung carcinomas are usually adenocarcinomas, squamous cell carcinomas, or large cell carcinomas. Metastatic carcinomas to the lung are also common, and can be difficult to distinguish from primary tumors.
Carcinoma of the Lung[accessedResource: NCIt:C4878][accessDate: 10-05-2010]
GeneRIF:12581892
GeneRIF:15754326
lung carcinoma
GeneRIF:11807786
GeneRIF:15041706
NCIt:C4878
carcinoma of lung
GeneRIF:11920544
Cancer of the Lung
GeneRIF:16038795
GeneRIF:12819188
GeneRIF:12115568
GeneRIF:12162425
GeneRIF:16052521
GeneRIF:15756594
GeneRIF:11844598
GeneRIF:15242764
Lung Cancer[accessedResource: NCIt:C4878][accessDate: 10-05-2010]
Cancer of the Lung[accessedResource: NCIt:C4878][accessDate: 10-05-2010]
GeneRIF:12067477
GeneRIF:15456784
GeneRIF:11939413
Carcinoma of the Lung
A carcinoma originating in the lung. Lung carcinomas usually arise from the epithelium that lines the bronchial tree (bronchogenic carcinomas), and are classified as small cell or non-small cell carcinomas. Non-small cell lung carcinomas are usually adenocarcinomas, squamous cell carcinomas, or large cell carcinomas. Metastatic carcinomas to the lung are also common, and can be difficult to distinguish from primary tumors.[accessedResource: NCIt:C4878][accessDate: 10-05-2010]
Cancer of Lung[accessedResource: NCIt:C4878][accessDate: 10-05-2010]
cancer of lung
GeneRIF:16125822
Carcinoma of Lung[accessedResource: NCIt:C4878][accessDate: 10-05-2010]
GeneRIF:11857309
James Malone
GeneRIF:15782117
GeneRIF:12021930
NIFSTD:birnlex_516
human
http://www.ebi.ac.uk/efo/EFO_0001994
Homo sapiens
Tomasz Adamusiak
James Malone
Ele Holloway
ciprofibrato
http://www.ebi.ac.uk/efo/EFO_0002404
A ring assembly that has formula C13H14Cl2O3.
CHEBI:50867
2-[4-(2,2-dichlorocyclopropyl)phenoxy]-2-methylpropanoic acid
ciprofibratum
InChIKey=KPSRODZRAIWAKH-WYUMXYHSCN
InChI=1/C13H14Cl2O3/c1-12(2,11(16)17)18-9-5-3-8(4-6-9)10-7-13(10,14)15/h3-6,10H,7H2,1-2H3,(H,16,17)/f/h16H
C13H14Cl2O3
ciprofibrate
James Malone
CC(C)(Oc1ccc(cc1)C2CC2(Cl)Cl)C(O)=O
Precursor Lymphoblastic Leukemia/Lymphoma
Precursor Lymphoid Neoplasm[accessedResource: NCIt:C7055][accessDate: 10-05-2010]
true
Precursor Lymphoblastic Leukemia/Lymphoma[accessedResource: NCIt:C7055][accessDate: 10-05-2010]
A neoplasm of immature malignant lymphocytes (lymphoblasts) committed to the B-cell or T-cell lineage. Neoplasms involving the bone marrow and the peripheral blood are called precursor lymphoblastic leukemias or acute lymphoblastic leukemias. Neoplasms involving primarily lymph nodes or extranodal sites are called lymphoblastic lymphomas. -- 2003[accessedResource: NCIt:C7055][accessDate: 10-05-2010]
DOID:5600
ALL
obsolete_acute lymphoblastic leukemia
Precursor Lymphoid Neoplasm
A neoplasm of immature malignant lymphocytes (lymphoblasts) committed to the B-cell or T-cell lineage. Neoplasms involving the bone marrow and the peripheral blood are called precursor lymphoblastic leukemias or acute lymphoblastic leukemias. Neoplasms involving primarily lymph nodes or extranodal sites are called lymphoblastic lymphomas. -- 2003
1.5
James Malone
NCIt:C7055
Duplicate with acute lymphocytic leukemia (EFO_0000220)
Cell lines used in experiments under the HapMap Project
HapMap cell lines
acinar cell carcinoma
Acinic cell adenocarcinoma
GeneRIF:11891193
Acinic Cell Carcinoma
Carcinomas, Acinar Cell[accessedResource: MSH:D018267][accessDate: 10-05-2010]
MSH:D018267
DOID:3025
Acinar carcinoma[accessedResource: SNOMEDCT:45410002][accessDate: 10-05-2010]
Acinar Cell Carcinomas
A malignant glandular epithelial neoplasm consisting of secretory cells forming acinar patterns. Representative examples include the acinar cell carcinoma of the pancreas and the acinar adenocarcinoma of the prostate gland.
James Malone
Acinar Adenocarcinoma
Acinar Cell Adenocarcinoma[accessedResource: NCIt:C3768][accessDate: 10-05-2010]
Acinar adenocarcinoma[accessedResource: SNOMEDCT:45410002][accessDate: 10-05-2010]
Acinar Cell Adenocarcinoma
A malignant glandular epithelial neoplasm consisting of secretory cells forming acinar patterns. Representative examples include the acinar cell carcinoma of the pancreas and the acinar adenocarcinoma of the prostate gland.[accessedResource: NCIt:C3768][accessDate: 10-05-2010]
SNOMEDCT:45410002
acinar cell carcinoma (morphologic abnormality)[accessedResource: DOID:3025][accessDate: 10-05-2010]
Acinic Cell Adenocarcinoma[accessedResource: NCIt:C3768][accessDate: 10-05-2010]
A malignant tumor arising from secreting cells of a racemose gland, particularly the salivary glands. Racemose (Latin racemosus, full of clusters) refers, as does acinar (Latin acinus, grape), to small saclike dilatations in various glands. Acinar cell carcinomas are usually well differentiated and account for about 13% of the cancers arising in the parotid gland. Lymph node metastasis occurs in about 16% of cases. Local recurrences and distant metastases many years after treatment are common. This tumor appears in all age groups and is most common in women. (Stedman, 25th ed; Holland et al., Cancer Medicine, 3d ed, p1240; from DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p575)[accessedResource: MSH:D018267][accessDate: 10-05-2010]
A malignant tumor arising from secreting cells of a racemose gland, particularly the salivary glands. Racemose (Latin racemosus, full of clusters) refers, as does acinar (Latin acinus, grape), to small saclike dilatations in various glands. Acinar cell carcinomas are usually well differentiated and account for about 13% of the cancers arising in the parotid gland. Lymph node metastasis occurs in about 16% of cases. Local recurrences and distant metastases many years after treatment are common. This tumor appears in all age groups and is most common in women. (Stedman, 25th ed; Holland et al., Cancer Medicine, 3d ed, p1240; from DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p575)
acinar cell carcinoma (morphologic abnormality)
Acinar carcinoma
Acinic Cell Carcinoma[accessedResource: NCIt:C3768][accessDate: 10-05-2010]
NCIt:C3768
NCIt:C12246
pars laryngea pharyngis
The lower part of the pharynx that connects to the esophagus.[accessedResource: NCIt:C12246][accessDate: 10-05-2010]
The portion of the pharynx that lies below the upper edge of the epiglottis and opens into the larynx and esophagus.
laryngopharynx
pars laryngea pharyngis[accessedResource: BTO:0001740][accessDate: 10-05-2010]
hypopharynx
James Malone
The portion of the pharynx that lies below the upper edge of the epiglottis and opens into the larynx and esophagus.[accessedResource: BTO:0001740][accessDate: 10-05-2010]
The lower part of the pharynx that connects to the esophagus.
hypopharynx[accessedResource: BTO:0001740][accessDate: 10-05-2010]
BTO:0001740
HEK-293H
James Malone
An information entity about the status of a publication describing the experiment.
publication status
Tomasz Adamusiak
upper limb
Superior member
A limb (as an arm, wing, fin, or leg) that is situated anteriorly.
A limb (as an arm, wing, fin, or leg) that is situated anteriorly.[accessedResource: BTO:0001729][accessDate: 10-05-2010]
EHDAA:6208
EV:0100014
James Malone
forelimb
Upper extremity
SAEL:42
FMAID:7183
MAT:0000394
XAO:0003030
BTO:0001729
Upper extremity[accessedResource: FMAID:7183][accessDate: 10-05-2010]
Superior member[accessedResource: FMAID:7183][accessDate: 10-05-2010]
upper limb[accessedResource: MAT:0000394][accessDate: 10-05-2010]
EMAPA:17412
MA:0000025
metastatic prostate cancer
James Malone
GRO:0005417
MAT:0000364
James Malone
phloem
BTO:0001058
PO:0005417
GRO:0005417[accessedResource: BTO:0001058][accessDate: 10-05-2010]
A complex tissue in the vascular system of higher plants that consists mainly of sieve tubes and elongated parenchyma cells usually with fibers and that functions in translocation and in support and storage.[accessedResource: BTO:0001058][accessDate: 10-05-2010]
A complex tissue in the vascular system of higher plants that consists mainly of sieve tubes and elongated parenchyma cells usually with fibers and that functions in translocation and in support and storage.
endometrioid carcinoma
GeneRIF:15781627
DOID:3000
Endometrioid Carcinoma of the Female Reproductive System[accessedResource: NCIt:C3769][accessDate: 10-05-2010]
Endometrioid Carcinoma of the Female Reproductive System
endometrioid carcinoma (morphologic abnormality)[accessedResource: DOID:3000][accessDate: 10-05-2010]
Endometrioid Carcinomas
An adenocarcinoma characterized by the presence of malignant glandular epithelial cells resembling endometrial cells. It can arise from the uterine body, ovary, fallopian tube, cervix, vagina, and uterine ligament.
Endometrioid cystadenocarcinoma[accessedResource: SNOMEDCT:30289006][accessDate: 10-05-2010]
GeneRIF:14599866
Female Reproductive Endometrioid Carcinoma[accessedResource: NCIt:C3769][accessDate: 10-05-2010]
MSH:D018269
Female Reproductive Endometrioid Carcinoma
SNOMEDCT:30289006
GeneRIF:14559803
Endometrioid adenocarcinoma[accessedResource: SNOMEDCT:30289006][accessDate: 10-05-2010]
Endometrioid adenocarcinoma
Endometrioid cystadenocarcinoma
Endometrioid Carcinomas[accessedResource: MSH:D018269][accessDate: 10-05-2010]
James Malone
NCIt:C3769
Endometrioid Adenocarcinomas[accessedResource: MSH:D018269][accessDate: 10-05-2010]
An adenocarcinoma characterized by the presence of cells resembling the glandular cells of the ENDOMETRIUM. It is a common histological type of ovarian CARCINOMA and ENDOMETRIAL CARCINOMA. There is a high frequency of co-occurrence of this form of adenocarcinoma in both tissues.
Adenocarcinomas, Endometrioid
Endometrioid carcinoma (morphologic abnormality)
Endometrioid Carcinoma of Female Reproductive System
Endometrioid Carcinoma of Female Reproductive System[accessedResource: NCIt:C3769][accessDate: 10-05-2010]
GeneRIF:11957146
An adenocarcinoma characterized by the presence of malignant glandular epithelial cells resembling endometrial cells. It can arise from the uterine body, ovary, fallopian tube, cervix, vagina, and uterine ligament.[accessedResource: NCIt:C3769][accessDate: 10-05-2010]
GeneRIF:14559989
GeneRIF:11748987
An adenocarcinoma characterized by the presence of cells resembling the glandular cells of the ENDOMETRIUM. It is a common histological type of ovarian CARCINOMA and ENDOMETRIAL CARCINOMA. There is a high frequency of co-occurrence of this form of adenocarcinoma in both tissues.[accessedResource: MSH:D018269][accessDate: 10-05-2010]
CHEBI:2038
C8H12N4O5
A N-glycosyl-1,3,5-triazine that has formula C8H12N4O5.
InChI=1/C8H12N4O5/c9-7-10-2-12(8(16)11-7)6-5(15)4(14)3(1-13)17-6/h2-6,13-15H,1H2,(H2,9,11,16)/t3-,4-,5-,6-/m1/s1/f/h9H2
http://www.ebi.ac.uk/efo/EFO_0002667
4-Amino-1-beta-D-ribofuranosyl-s-triazin-2(1H)-one
Azacitidine
Nc1ncn([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)n1
4-amino-1-beta-D-ribofuranosyl-1,3,5-triazin-2(1H)-one
InChIKey=NMUSYJAQQFHJEW-QUSQBIOGDY
5-azacytidine
U2-OS
U2OS
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311936
CS57515 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311936
CS57515
James Malone
facioscapulohumeral muscular dystrophy
FSH - Facioscapulohumeral muscular dystrophy
Facioscapulohumeral Type Progressive Muscular Dystrophy
Landouzy Dejerine muscular dystrophy
Facioscapulohumeral Atrophies[accessedResource: MSH:D020391][accessDate: 10-05-2010]
Landouzy-Dejerine muscular dystrophy[accessedResource: DOID:11727][accessDate: 10-05-2010]
Fascioscapulohumeral muscular dystrophy[accessedResource: SNOMEDCT:399091004][accessDate: 10-05-2010]
Facioscapulohumeral muscular dystrophy (disorder)
FSH - Facioscapulohumeral muscular dystrophy[accessedResource: SNOMEDCT:399091004][accessDate: 10-05-2010]
Landouzy-Déjérine muscular dystrophy[accessedResource: SNOMEDCT:399091004][accessDate: 10-05-2010]
An autosomal dominant degenerative muscle disease characterized by slowly progressive weakness of the muscles of the face, upper-arm, and shoulder girdle. The onset of symptoms usually occurs in the first or second decade of life. Affected individuals usually present with impairment of upper extremity elevation. This tends to be followed by facial weakness, primarily involving the orbicularis oris and orbicularis oculi muscles. (Neuromuscul Disord 1997;7(1):55-62; Adams et al., Principles of Neurology, 6th ed, p1420)[accessedResource: MSH:D020391][accessDate: 10-05-2010]
GeneRIF:12874395
SNOMEDCT:399091004
DOID:11727
Progressive Muscular Dystrophy, Facioscapulohumeral Type[accessedResource: MSH:D020391][accessDate: 10-05-2010]
Landouzy-Dejerine Dystrophies[accessedResource: MSH:D020391][accessDate: 10-05-2010]
Landouzy Dejerine Dystrophy[accessedResource: MSH:D020391][accessDate: 10-05-2010]
GeneRIF:15520407
James Malone
Dystrophy, Landouzy-Dejerine
FSHD - Facioscapulohumeral muscular dystrophy
Facioscapulohumeral muscular dystrophy (disorder)[accessedResource: SNOMEDCT:399091004][accessDate: 10-05-2010]
Facioscapulohumeral Atrophy[accessedResource: MSH:D020391][accessDate: 10-05-2010]
Facioscapulohumeral Atrophy
MSH:D020391
Facioscapulohumeral Atrophies
Dystrophies, Facioscapulohumeral Muscular
Fascioscapulohumeral muscular dystrophy
GeneRIF:15551024
An autosomal dominant degenerative muscle disease characterized by slowly progressive weakness of the muscles of the face, upper-arm, and shoulder girdle. The onset of symptoms usually occurs in the first or second decade of life. Affected individuals usually present with impairment of upper extremity elevation. This tends to be followed by facial weakness, primarily involving the orbicularis oris and orbicularis oculi muscles. (Neuromuscul Disord 1997;7(1):55-62; Adams et al., Principles of Neurology, 6th ed, p1420)
Muscular Dystrophies, Facioscapulohumeral[accessedResource: MSH:D020391][accessDate: 10-05-2010]
FMD - Facioscapulohumeral muscular dystrophy[accessedResource: SNOMEDCT:399091004][accessDate: 10-05-2010]
Landouzy-Déjérine muscular dystrophy
FMD - Facioscapulohumeral muscular dystrophy
FSHD - Facioscapulohumeral muscular dystrophy[accessedResource: SNOMEDCT:399091004][accessDate: 10-05-2010]
Landouzy-Dejerine Dystrophies
ZFS:0000018
gastrula germ-ring
James Malone
gyrus dentatus
MAT:0000114
NIFSTD:birnlex_1178
A serrated strip of gray matter under the medial border of the hippocampus and in its depths; it is an archaeocortex which develops along the edge of the hippocampal fissure and which consists of molecular, granular, and polymorphic layers.
gyrus dentatus[accessedResource: BTO:0002496][accessDate: 10-05-2010]
fascia dentata[accessedResource: NIFSTD:birnlex_1178][accessDate: 10-05-2010]
Tomasz Adamusiak
A serrated strip of gray matter under the medial border of the hippocampus and in its depths; it is an archaeocortex which develops along the edge of the hippocampal fissure and which consists of molecular, granular, and polymorphic layers.[accessedResource: BTO:0002496][accessDate: 10-05-2010]
dentate gyrus
fascia dentata
MA:0000191
EMAPA:19148
SAEL:51
BTO:0002496
James Malone
EV:0100180
Caco-2/TC7
James Malone
Ele Holloway
C23H22O6
5'beta-rotenone
A chromenone that has formula C23H22O6.
James Malone
Noxfire
InChI=1/C23H22O6/c1-11(2)16-8-14-15(28-16)6-5-12-22(24)21-13-7-18(25-3)19(26-4)9-17(13)27-10-20(21)29-23(12)14/h5-7,9,16,20-21H,1,8,10H2,2-4H3/t16-,20-,21+/m1/s1
[2R-(2alpha,6aalpha,12aalpha)]-1,2,12,12a-tetrahydro-8,9-dimethoxy-2-(1-methylethenyl)[1]benzopyrano[3,4-b]furo[2,3-H][1]benzopyran-6(6aH)-one
http://www.ebi.ac.uk/efo/EFO_0001606
[H][C@@]1(Cc2c(O1)ccc1C(=O)[C@@]3([H])c4cc(OC)c(OC)cc4OC[C@@]3([H])Oc21)C(C)=C
Canex
InChIKey=JUVIOZPCNVVQFO-HBGVWJBIBF
Barbasco
(-)-cis-rotenone
CHEBI:28201
(2R,6aS,12aS)-8,9-dimethoxy-2-(prop-1-en-2-yl)-1,2,12,12a-tetrahydrochromeno[3,4-b]furo[2,3-h]chromen-6(6aH)-one
rotenone
1.5
true
obsolete_brain tumor glioblastoma
James Malone
duplication with glioblastoma (EFO_0000519)
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons.
glia[accessedResource: BTO:0000524][accessDate: 10-05-2010]
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons. (Reichenbach and Wolburg)[accessedResource: NIFSTD:sao313023570][accessDate: 10-05-2010]
MERGED DEFINITION:nTARGET DEFINITION: The delicate network of branched cells and fibers that supports the tissue of the central nervous system.n--------------------nSOURCE DEFINITION: The cells of the supportive tissue of the central nervous system (neuroglia). These non-neural cells are of three kinds: astrocytes, oligodendrocytes (collectively termed macroglia) and microglia.
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons.[accessedResource: CL:0000125][accessDate: 10-05-2010]
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons. (Reichenbach and Wolburg)
neuroglia cell
BTO:0000524
neuroglia
NIFSTD:sao313023570
neuroglia[accessedResource: CL:0000125][accessDate: 10-05-2010]
glia
Tomasz Adamusiak
mixed glial cells
glial cell
MERGED DEFINITION:nTARGET DEFINITION: The delicate network of branched cells and fibers that supports the tissue of the central nervous system.n--------------------nSOURCE DEFINITION: The cells of the supportive tissue of the central nervous system (neuroglia). These non-neural cells are of three kinds: astrocytes, oligodendrocytes (collectively termed macroglia) and microglia.[accessedResource: BTO:0000524][accessDate: 10-05-2010]
neuroglial cell[accessedResource: BTO:0000524][accessDate: 10-05-2010]
neuroglia cell[accessedResource: BTO:0000524][accessDate: 10-05-2010]
neuroglial cell
James Malone
CL:0000125
GeneRIF:14587027
A slowly growing malignant neoplasm derived from cartilage cells, occurring most frequently in pelvic bones or near the ends of long bones, in middle-aged and old people. Most chondrosarcomas arise de novo, but some may develop in a preexisting benign cartilaginous lesion or in patients with ENCHONDROMATOSIS. (Stedman, 25th ed)[accessedResource: MSH:D002813][accessDate: 10-05-2010]
SNOMEDCT:14990007
Chondrosarcoma morphology
GeneRIF:12736724
James Malone
[M]Chondrosarcoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189886003][accessDate: 10-05-2010]
GeneRIF:15694358
GeneRIF:15534109
chondrosarcoma of bone
Chondrosarcoma morphology[accessedResource: SNOMEDCT:14990007][accessDate: 10-05-2010]
Chondrosarcoma, NOS
chondrosarcoma
GeneRIF:16288985
Chondrosarcomas
GeneRIF:15796962
NCIt:C2946
[M]Chondrosarcoma NOS (morphologic abnormality)
GeneRIF:15316669
GeneRIF:12021923
A slowly growing malignant neoplasm derived from cartilage cells, occurring most frequently in pelvic bones or near the ends of long bones, in middle-aged and old people. Most chondrosarcomas arise de novo, but some may develop in a preexisting benign cartilaginous lesion or in patients with ENCHONDROMATOSIS. (Stedman, 25th ed)
[M]Chondrosarcoma NOS
Chondrosarcomas[accessedResource: MSH:D002813][accessDate: 10-05-2010]
GeneRIF:15499569
GeneRIF:11776394
Fibrochondrosarcoma[accessedResource: SNOMEDCT:14990007][accessDate: 10-05-2010]
[M]Chondrosarcoma NOS[accessedResource: SNOMEDCT:189886003][accessDate: 10-05-2010]
Fibrochondrosarcoma
GeneRIF:12618336
DOID:3371
chondrosarcoma NOS (morphologic abnormality)
MSH:D002813
Chondrosarcoma, NOS[accessedResource: SNOMEDCT:14990007][accessDate: 10-05-2010]
chondrosarcoma (morphologic abnormality)[accessedResource: DOID:3371][accessDate: 10-05-2010]
chondrosarcoma of bone[accessedResource: DOID:3371][accessDate: 10-05-2010]
chondrosarcoma NOS (morphologic abnormality)[accessedResource: DOID:3371][accessDate: 10-05-2010]
Chondrosarcoma (morphologic abnormality)
A malignant mesenchymal tumor arising from cartilage-forming tissues involving the bones. It affects middle-aged to elderly adults, and the pelvic bones, ribs, shoulder girdle, and long bones are the most common sites of involvement. Most chondrosarcomas arise de novo, but some may develop in a preexisting benign cartilaginous lesion.
GeneRIF:15226640
GeneRIF:15475194
GeneRIF:16157221
A malignant mesenchymal tumor arising from cartilage-forming tissues involving the bones. It affects middle-aged to elderly adults, and the pelvic bones, ribs, shoulder girdle, and long bones are the most common sites of involvement. Most chondrosarcomas arise de novo, but some may develop in a preexisting benign cartilaginous lesion.[accessedResource: NCIt:C2946][accessDate: 10-05-2010]
SNOMEDCT:189886003
A temporal measure of the length of time that a patient will remain alive without the disease getting worse.
distant metastasis free survival
James Malone
SAEL:119
Organ with organ cavity which is continuous proximally with the right and left uterine tubes and distally is connected to the vagina. Examples: There is only one uterus.[accessedResource: FMAID:17558][accessDate: 10-05-2010]
womb[accessedResource: BTO:0001424][accessDate: 10-05-2010]
Organ with organ cavity which is continuous proximally with the right and left uterine tubes and distally is connected to the vagina. Examples: There is only one uterus.
MAT:0000127
TADS:0000421
FMAID:17558
EV:0100113
uterus
BTO:0001424
WBbt:0006760
FBbt:00004924
uterine horns[accessedResource: MAT:0000127][accessDate: 10-05-2010]
uterine horn[accessedResource: MAT:0000127][accessDate: 10-05-2010]
womb
An organ of the female mammal for containing and usually for nourishing the young during development previous to birth.
EMAPA:18985
An organ of the female mammal for containing and usually for nourishing the young during development previous to birth.[accessedResource: BTO:0001424][accessDate: 10-05-2010]
MA:0000389
uterine horn
James Malone
uterine horns
granulocyte-macrophage progenitor
MAT:0000486
distal end of femur
Distal is a geometric modifier describing the point furthest from the point of attachment to the body or to some point of origin. For example, distal end of femur.
distal
James Malone
CL:0000622
pancreatic acinar cell
acinar cell
Tomasz Adamusiak
Jie Zheng
ARMD - Age-related macular degeneration
armD[accessedResource: DOID:10871][accessDate: 10-05-2010]
Macular Degenerations, Age-Related[accessedResource: MSH:D008268][accessDate: 10-05-2010]
DOID:10871
Senile macular retinal degeneration[accessedResource: SNOMEDCT:267718000][accessDate: 10-05-2010]
Maculopathies, Age-Related[accessedResource: MSH:D008268][accessDate: 10-05-2010]
GeneRIF:12742846
GeneRIF:12592048
NIFSTD:birnlex_12812
GeneRIF:15761121
Macular Dystrophies
MACULOPATHIES AGE RELAT[accessedResource: MSH:D008268][accessDate: 10-05-2010]
Macular degeneration (disorder)
Age-Related Maculopathies
Dystrophy, Macular[accessedResource: MSH:D008268][accessDate: 10-05-2010]
Age related macular degeneration (disorder) [Ambiguous]
GeneRIF:12242346
Macular degeneration (senile) of retina, unspecified
SNOMEDCT:302891003
ARMD - Age-related macular degeneration[accessedResource: SNOMEDCT:267718000][accessDate: 10-05-2010]
Age-related macular degeneration (disorder)[accessedResource: SNOMEDCT:267718000][accessDate: 10-05-2010]
GeneRIF:15111581
GeneRIF:12005165
AAMD - Age related macular degeneration
GeneRIF:12882809
Macular Degeneration
Dystrophies, Macular[accessedResource: MSH:D008268][accessDate: 10-05-2010]
Macular Degenerations[accessedResource: MSH:D008268][accessDate: 10-05-2010]
Tomasz Adamusiak
GeneRIF:15829498
ICD9:362.50
SNOMEDCT:267718000
Maculopathy, Age-Related
MSH:D008268
SMD - Senile macular degeneration[accessedResource: SNOMEDCT:267718000][accessDate: 10-05-2010]
Macular Degenerations
Macular Dystrophy
GeneRIF:14609921
Age-related macular degeneration (disorder)
MACULOPATHY AGE RELAT
Age related macular degeneration (disorder) [Ambiguous][accessedResource: DOID:10871][accessDate: 10-05-2010]
Degenerative changes in the macula lutea of the retina.
Unspecified senile macular degeneration
James Malone
GeneRIF:15208270
GeneRIF:15028284
GeneRIF:11919200
AMD - Age-related macular degeneration
AAMD - Age related macular degeneration[accessedResource: SNOMEDCT:267718000][accessDate: 10-05-2010]
Amended[accessedResource: DOID:10871][accessDate: 10-05-2010]
Senile macular retinal degeneration
Senile macular degeneration
Macular degeneration (disorder)[accessedResource: SNOMEDCT:302891003][accessDate: 10-05-2010]
Macular degeneration (senile) of retina, unspecified[accessedResource: ICD9:362.50][accessDate: 10-05-2010]
Senile macular degeneration[accessedResource: NIFSTD:birnlex_12812][accessDate: 10-05-2010]
Amended
GeneRIF:12099691
GeneRIF:14587307
Unspecified senile macular degeneration[accessedResource: DOID:10871][accessDate: 10-05-2010]
MACULAR DEGENERATION NOS[accessedResource: ICD9:362.50][accessDate: 10-05-2010]
Macular degeneration[accessedResource: SNOMEDCT:302891003][accessDate: 10-05-2010]
GeneRIF:15761120
Age-Related Macular Degenerations
AGE RELAT MACULOPATHY[accessedResource: MSH:D008268][accessDate: 10-05-2010]
GeneRIF:14597045
GeneRIF:12902384
GeneRIF:16079201
Maculopathy, Age-Related[accessedResource: MSH:D008268][accessDate: 10-05-2010]
age-related macular degeneration
Degenerative changes in the RETINA usually of older adults which results in a loss of vision in the center of the visual field (the MACULA LUTEA) because of damage to the retina. It occurs in dry and wet forms.
GeneRIF:15479453
GeneRIF:12427233
SMD - Senile macular degeneration
MACULAR DEGENERATION NOS
Degenerative changes in the RETINA usually of older adults which results in a loss of vision in the center of the visual field (the MACULA LUTEA) because of damage to the retina. It occurs in dry and wet forms.[accessedResource: MSH:D008268][accessDate: 10-05-2010]
Senile macular degeneration of retina
AGE RELAT MACULOPATHIES
ARMD
GeneRIF:15761122
Senile macular degeneration of retina[accessedResource: NIFSTD:birnlex_12812][accessDate: 10-05-2010]
AMD - Age-related macular degeneration[accessedResource: SNOMEDCT:267718000][accessDate: 10-05-2010]
KHOS240S
James Malone
Ele Holloway
James Malone
MO_983
A vortexer is an instrument that mixes small vials of liquid by creating a rotation of the liquid around its own center. It consists of an electric motor with the drive shaft oriented vertically and attached to a cupped rubber piece mounted slightly off-center. As the motor runs the rubber piece oscillates rapidly in a circular motion. When a test tube or other appropriate container is pressed into the rubber cup (or touched to its edge) the motion is transmitted to the liquid inside and a vortex is created.
vortexer
http://www.ebi.ac.uk/efo/EFO_0002027
Tomasz Adamusiak
vortex_mixer
Jie Zheng
The first part of the small intestine extending from the pylorus to the jejunum.
BTO:0000365
EHDAA:3830
The first part of the small intestine extending from the pylorus to the jejunum.[accessedResource: BTO:0000365][accessDate: 10-05-2010]
EMAPA:18852
duodenum
MAT:0000044
SAEL:31
XAO:0000236
FMAID:7206
MA:0000338
James Malone
EV:0100073
http://www.arabidopsis.org/servlets/TairObject?id=1005158837&type=germplasm
CS57813 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158837&type=germplasm
CS57813
James Malone
James Malone
OBI_0000070
measuring
A hybridization on a microarray.
scientific observation
An assay is a process with the objective to create as an output information about a material entity (bearing evaluant role).
assay
A planned process with the objective to produce information about some evaluant
http://www.ebi.ac.uk/efo/EFO_0001455
A planned process with the objective to produce information about some evaluant
FBbt:00005489
dorsal trunk specific anlage
James Malone
HL60 cell
HL-60
HL60 cell[accessedResource: BTO:0000738][accessDate: 10-05-2010]
BTO:0000738
HL60
Human acute myeloid leukemia established from the peripheral blood of a 35-year-old woman with acute myeloid leukemia (AML FAB M2) in 1976.
HL-60 is a cell line which is the bearer of human acute myeloid leukemia established from the peripheral blood of a 35-year-old woman with acute myeloid leukemia (AML FAB M2) in 1976.
Human acute myeloid leukemia established from the peripheral blood of a 35-year-old woman with acute myeloid leukemia (AML FAB M2) in 1976.[accessedResource: BTO:0000738][accessDate: 10-05-2010]
HL-60 cell
HL-60 cell[accessedResource: BTO:0000738][accessDate: 10-05-2010]
NCIt:C82393
The stage in life when sex glands become functional. It is characterized by the development of secondary sex characteristics, reproductive functions, and growth spurts.
The stage in life when sex glands become functional. It is characterized by the development of secondary sex characteristics, reproductive functions, and growth spurts.[accessedResource: NCIt:C82393][accessDate: 10-05-2010]
puberty
Tomasz Adamusiak
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158648&type=germplasm
CS57624 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158648&type=germplasm
CS57624
James Malone
A viral disease is a disease factor that is caused primarily by the infection or otherise hosting of a virus.
viral disease
James Malone
Ele Holloway
James Malone
UACC893
ovarian adenoma benign
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0001532
C=C
ethene
CHEBI:18153
Aethylen
H2C=CH2
ethylene
CH2=CH2
InChI=1/C2H4/c1-2/h1-2H2
InChIKey=VGGSQFUCUMXWEO-UHFFFAOYAE
James Malone
An alkene that has formula C2H4.
C2H4
Aethen
James Malone
SUM185PE
GeneRIF:15845485
sepsis
James Malone
GeneRIF:12947340
BLOOD POIS
GeneRIF:12480554
GeneRIF:11770048
GeneRIF:12052963
Septicemias[accessedResource: MSH:D018805][accessDate: 10-05-2010]
GeneRIF:15131465
GeneRIF:12946935
Septicemia
Sepsis, NOS
GeneRIF:16260097
GeneRIF:15383576
GeneRIF:12218141
GeneRIF:12219031
Poisoning, Blood
GeneRIF:14525968
GeneRIF:14659593
Pyohemias
GeneRIF:12117955
Systemic infection
GeneRIF:15030585
GeneRIF:12198614
GeneRIF:15645239
Pyemia
GeneRIF:12959973
Systemic inflammatory response syndrome with a proven or suspected infectious etiology. When sepsis is associated with organ dysfunction distant from the site of infection, it is called severe sepsis. When sepsis is accompanied by HYPOTENSION despite adequate fluid infusion, it is called SEPTIC SHOCK.
GeneRIF:12093893
GeneRIF:11876758
GeneRIF:12472775
Septicemia[accessedResource: MSH:D018805][accessDate: 10-05-2010]
GeneRIF:15717270
Pyaemias
GeneRIF:15128822
GeneRIF:12031601
Systemic infection[accessedResource: SNOMEDCT:91302008][accessDate: 10-05-2010]
Pyohemia[accessedResource: MSH:D018805][accessDate: 10-05-2010]
SNOMEDCT:91302008
Poisonings, Blood
GeneRIF:15634936
GeneRIF:16239554
GeneRIF:12946943
GeneRIF:15124023
GeneRIF:14688199
GeneRIF:15947070
Septicemia, NOS[accessedResource: SNOMEDCT:91302008][accessDate: 10-05-2010]
The presence of pathogenic microorganisms in the blood stream causing a rapidly progressing systemic reaction that may lead to shock. Symptoms include fever, chills, tachycardia, and increased respiratory rate. It is a medical emergency that requires urgent medical attention.[accessedResource: NCIt:C3364][accessDate: 10-05-2010]
GeneRIF:15557190
Sepsis associated with organ dysfunction distant from the site of infection.[accessedResource: MSH:D018805][accessDate: 10-05-2010]
Sepsis associated with organ dysfunction distant from the site of infection.
GeneRIF:15650061
GeneRIF:12219025
GeneRIF:15155262
Septicemia, NOS
Sepsis, NOS[accessedResource: SNOMEDCT:91302008][accessDate: 10-05-2010]
GeneRIF:12296849
GeneRIF:15504976
GeneRIF:12643861
Systemic inflammatory response syndrome with a proven or suspected infectious etiology. When sepsis is associated with organ dysfunction distant from the site of infection, it is called severe sepsis. When sepsis is accompanied by HYPOTENSION despite adequate fluid infusion, it is called SEPTIC SHOCK.[accessedResource: MSH:D018805][accessDate: 10-05-2010]
Systemic infection, NOS[accessedResource: SNOMEDCT:91302008][accessDate: 10-05-2010]
GeneRIF:15760677
GeneRIF:12615620
GeneRIF:12147224
Systemic disease associated with the presence of pathogenic microorganisms or their toxins in the blood.
GeneRIF:14991091
Septicemia caused by pyogenic microorganisms (e.g., STAPHYLOCOCCUS; BACILLUS), resulting in the formation of secondary foci of SUPPURATION and multiple ABSCESSES.[accessedResource: MSH:D018805][accessDate: 10-05-2010]
GeneRIF:12517942
GeneRIF:15563579
GeneRIF:15834314
GeneRIF:15845478
Pyohemias[accessedResource: MSH:D018805][accessDate: 10-05-2010]
GeneRIF:12022759
GeneRIF:15244040
GeneRIF:15634264
GeneRIF:15201701
GeneRIF:14993594
GeneRIF:15211109
BLOOD POIS[accessedResource: MSH:D018805][accessDate: 10-05-2010]
GeneRIF:12055255
GeneRIF:15472172
GeneRIF:15328161
GeneRIF:12006369
GeneRIF:15489631
GeneRIF:12117983
Septicemias
GeneRIF:15834309
GeneRIF:15803053
Systemic infection (disorder)
Poisoning, Blood[accessedResource: MSH:D018805][accessDate: 10-05-2010]
GeneRIF:15240146
GeneRIF:15545825
GeneRIF:11774822
Sepsis, Severe
GeneRIF:15034057
GeneRIF:15614130
GeneRIF:12027409
NCIt:C3364
GeneRIF:15890324
Pyaemia
GeneRIF:12604029
GeneRIF:15579460
A disease of infectious agent resulting from the presence of pathogenic microbial agents, including pathogenic viruses, pathogenic bacteria, fungi, protozoa, multicellular parasites, and aberrant proteins known as prions. These pathogens are able to cause disease in animals and/or plants. Infectious pathologies are usually qualified as contagious disease (also called communicable disease) due to their potentiality of transmission from one person or species to another.
GeneRIF:14517747
GeneRIF:12593995
GeneRIF:15489642
Pyemia[accessedResource: MSH:D018805][accessDate: 10-05-2010]
GeneRIF:12218091
GeneRIF:15545827
MSH:D018805
GeneRIF:12032273
Septicemia caused by pyogenic microorganisms (e.g., STAPHYLOCOCCUS; BACILLUS), resulting in the formation of secondary foci of SUPPURATION and multiple ABSCESSES.
GeneRIF:15129283
Systemic infection (disorder)[accessedResource: SNOMEDCT:91302008][accessDate: 10-05-2010]
Pyohemia
GeneRIF:12496437
The presence of pathogenic microorganisms in the blood stream causing a rapidly progressing systemic reaction that may lead to shock. Symptoms include fever, chills, tachycardia, and increased respiratory rate. It is a medical emergency that requires urgent medical attention.
GeneRIF:15585684
Septicaemia, NOS
Pyemias
Sepsis, Severe[accessedResource: MSH:D018805][accessDate: 10-05-2010]
GeneRIF:15319291
Systemic infection, NOS
GeneRIF:12571074
GeneRIF:16207247
GeneRIF:11956648
Systemic disease associated with the presence of pathogenic microorganisms or their toxins in the blood.[accessedResource: MSH:D018805][accessDate: 10-05-2010]
Pyemias[accessedResource: MSH:D018805][accessDate: 10-05-2010]
GeneRIF:15050965
GeneRIF:15733912
Poisonings, Blood[accessedResource: MSH:D018805][accessDate: 10-05-2010]
GeneRIF:12869495
Septicaemia, NOS[accessedResource: SNOMEDCT:91302008][accessDate: 10-05-2010]
GeneRIF:15187138
GeneRIF:12721157
Pyaemias[accessedResource: MSH:D018805][accessDate: 10-05-2010]
Pyaemia[accessedResource: MSH:D018805][accessDate: 10-05-2010]
GeneRIF:14966572
GeneRIF:11776298
GeneRIF:14660484
GeneRIF:15155612
GeneRIF:14634136
GeneRIF:15554961
true
millimole
http://www.ebi.ac.uk/efo/EFO_0001802
James Malone
A millimole is a substance unit equal to a thousandth of a mol or 10^[-3] mol.
UO:0000040
mmol
A substance unit equal to a thousandth of a mol or 10^[-3] mol.
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311933
CS57512 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311933
CS57512
James Malone
gene
protocol
MO_214
Tomasz Adamusiak
true
A protocol is an information entity which is a set of instructions that describe an how an experiment is done.
Jie Zheng
a protocol is a plan specification which has sufficient level of detail and quantitative information to communicate it between domain experts, so that different domain experts will reliably be able to independently reproduce the process.
http://www.ebi.ac.uk/efo/EFO_0001442
James Malone
plan specification
A large, flat, oval cell found in connective tissue and responsible for the formation of fibers.
NIFSTD:nlx_cell_20090201
fibroblast
A connective-tissue cell of mesenchymal origin that secretes proteins and especially molecular collagen from which the extracellular fibrillar matrix of connective tissue forms.
A large, flat, oval cell found in connective tissue and responsible for the formation of fibers.[accessedResource: NIFSTD:nlx_cell_20090201][accessDate: 10-05-2010]
A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules.[accessedResource: CL:0000057][accessDate: 10-05-2010]
A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules.
CL:0000057
primary dermal fibroblast
James Malone
mouse embryonic fibroblast
BTO:0000452
A connective-tissue cell of mesenchymal origin that secretes proteins and especially molecular collagen from which the extracellular fibrillar matrix of connective tissue forms.[accessedResource: BTO:0000452][accessDate: 10-05-2010]
Tomasz Adamusiak
Helen Parkinson
SNP array is a DNA array used to detect polymorphisms in DNA samples
SNP array
BTO:0001099
blastocyst
Blastosphere
An embryo made up of two groups of cells. One group will develop into the fetus and the other will become the placenta.
Blastula[accessedResource: NCIt:C13739][accessDate: 10-05-2010]
NCIt:C13739
Blastosphere[accessedResource: NCIt:C13739][accessDate: 10-05-2010]
The modified blastula of a placental mammal.
James Malone
The modified blastula of a placental mammal.[accessedResource: BTO:0001099][accessDate: 10-05-2010]
An embryo made up of two groups of cells. One group will develop into the fetus and the other will become the placenta.[accessedResource: NCIt:C13739][accessDate: 10-05-2010]
Blastula
ITM-E6E7-ST
James Malone
Ele Holloway
SW780
James Malone
Ele Holloway
Helen Parkinson
aggressive behaviour
aggression
Agressive behaviour is the process of engaging on hostile, affective, or retaliatory aggression and instrumental, predatory, or goal-oriented aggression towards other individuals.
aggressive behavior
FMA:30319
ligament
James Malone
http://sig.biostr.washington.edu/fma3.0#Pelvis
BTO:0001006
The inferior portion of the trunk of the body, bounded anteriorly and laterally by the two hip bones and posteriorly by the sacrum and coccyx. The pelvis is divided by a plane passing through the terminal lines into the p. major superiorly and the p. minor inferiorly.
Subdivision of abdomen, which is demarcated from the abdomen proper by the plane of the superior pelvic aperture, and from the perineum by the inferior surface of the pelvic diaphragm; together with the abdomen proper, it constitutes the abdomen. Examples: There is only one pelvis.
The inferior portion of the trunk of the body, bounded anteriorly and laterally by the two hip bones and posteriorly by the sacrum and coccyx. The pelvis is divided by a plane passing through the terminal lines into the p. major superiorly and the p. minor inferiorly.[accessedResource: BTO:0001006][accessDate: 10-05-2010]
pelvis
BTO:0000093
MCF-7 cell
MCF-7 cell[accessedResource: BTO:0000093][accessDate: 10-05-2010]
MCF7 cell[accessedResource: BTO:0000093][accessDate: 10-05-2010]
Human breast adenocarcinoma, established from the pleural effusion of a 69-year-old caucasian woman with metastatic mammary carcinoma (after radio- and hormone therapy) in 1970; cells were described of being positive for cytoplasmic estrogen receptors and having the capability to form domes.[accessedResource: BTO:0000093][accessDate: 10-05-2010]
James Malone
Human breast adenocarcinoma, established from the pleural effusion of a 69-year-old caucasian woman with metastatic mammary carcinoma (after radio- and hormone therapy) in 1970; cells were described of being positive for cytoplasmic estrogen receptors and having the capability to form domes.
MCF-7
MCF7 cell
MCC:0000307
MCF7
http://www.ebi.ac.uk/efo/EFO_0001892
CHEBI:50646
An agent that inhibits bone resorption and/or favor bone mineralization and bone regeneration. Used to heal bone fractures and to treat metabolic bone diseases.
bone density conservation agent
James Malone
The total quantity or strength of a substance administered at one time.
dose
James Malone
sulindac
cis-5-Fluoro-2-methyl-1-((4-(methylsulfinyl)phenyl)methylene)-1H-indene-3-acetic acid
InChI=1/C20H17FO3S/c1-12-17(9-13-3-6-15(7-4-13)25(2)24)16-8-5-14(21)10-19(16)18(12)11-20(22)23/h3-10H,11H2,1-2H3,(H,22,23)/b17-9-/f/h22H
CHEBI:9352
{(1Z)-5-fluoro-2-methyl-1-[4-(methylsulfinyl)benzylidene]-1H-inden-3-yl}acetic acid
Clinoril
cis-5-Fluoro-2-methyl-1-((p-methylsulfinyl)benzylidene)indene-3-acetic acid
James Malone
A sulfoxide that has formula C20H17FO3S.
C20H17FO3S
http://www.ebi.ac.uk/efo/EFO_0001618
InChIKey=MLKXDPUZXIRXEP-CFZDBRNIDX
Sulindacum
CC1=C(CC(O)=O)c2cc(F)ccc2\\C1=C/c3ccc(cc3)S(C)=O
sulindaco
(Z)-5-Fluoro-2-methyl-1-((p-(methylsulfinyl)phenyl)methylene)-1H-indene-3-acetic acid
birnlex_7079
Theiler stage 24
Tomasz Adamusiak
Jie Zheng
Substance produced by, and obtained from, certain living cells (especially bacteria, yeasts and moulds), or an equivalent synthetic substance, which is biostatic or biocidal at low concentrations to some other form of life, especially pathogenic or noxious organisms.
antibiotics
http://www.ebi.ac.uk/efo/EFO_0001485
antibiotique
James Malone
Antibiotika
Antibiotikum
antibiotic
GM07055
James Malone
true
Gy
An absorbed dose unit which is equal to the absorption of one joule of radiation energy by one kilogram of matter.
Gray
µmol
Tomasz Adamusiak
James Malone
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001801
true
umol
A substance unit equal to a millionth of a mol or 10^[-6] mol.
MO_752
micromole
thioridazinum
CSc1ccc2Sc3ccccc3N(CCC3CCCCN3C)c2c1
3-Methylmercapto-N-(2'-(N-methyl-2-piperidyl)ethyl)phenothiazine
Sonapax
Melleril
Malloryl
C21H26N2S2
Mellaril-S
CHEBI:9566
InChIKey=KLBQZWRITKRQQV-UHFFFAOYAE
2-Methylmercapto-10-(2-(N-methyl-2-piperidyl)ethyl)phenothiazine
Meleril
Mellerette
A phenothiazine derivative having a methylsulfanyl subsitituent at the 2-position and a (1-methylpiperidin-2-yl)ethyl] group at the N-10 position.
InChI=1/C21H26N2S2/c1-22-13-6-5-7-16(22)12-14-23-18-8-3-4-9-20(18)25-21-11-10-17(24-2)15-19(21)23/h3-4,8-11,15-16H,5-7,12-14H2,1-2H3
10-[2-(1-methyl-2-piperidyl)ethyl]-2-methylsulfanyl-phenothiazine
Thioridazin
A phenothiazine that has formula C21H26N2S2.
10-[2-(1-methylpiperidin-2-yl)ethyl]-2-(methylsulfanyl)-10H-phenothiazine
Mellerets
tioridazina
Mellaril
Mallorol
thioridazine
Orsanil
http://www.ebi.ac.uk/efo/EFO_0001625
James Malone
PO:0009062
BTO:0001733
GRO:000543[accessedResource: BTO:0001733][accessDate: 10-05-2010]
GRO:000543
gynoecium
The female reproductive organs of a flower; the pistil or pistils considered as a group.[accessedResource: BTO:0001733][accessDate: 10-05-2010]
The female reproductive organs of a flower; the pistil or pistils considered as a group.
ZFS:0000033
hatching long-pec
James Malone
CHEBI:25675
http://www.ebi.ac.uk/efo/EFO_0001586
oligomycins
plasma cell neoplasm
James Malone
Cardiovascular system disease[accessedResource: SNOMEDCT:49601007][accessDate: 10-05-2010]
GeneRIF:15375785
Other disorders of papillary muscle
[X]Cardiovascular disease, unspecified (disorder)[accessedResource: SNOMEDCT:195594006][accessDate: 10-05-2010]
GeneRIF:12943734
GeneRIF:12818409
GeneRIF:14967720
GeneRIF:15459608
CVD
ICD9:429
ICD9:423.8
Other diseases of endocardium[accessedResource: SNOMEDCT:266241000][accessDate: 10-05-2010]
SNOMEDCT:195646003
Other heart disease NOS (disorder)
GeneRIF:15780075
ICD9:429.79
Disease affecting entire cardiovascular system (disorder)[accessedResource: SNOMEDCT:105980002][accessDate: 10-05-2010]
GeneRIF:12669427
Cardiovascular disorder, NOS
Pathological conditions involving the CARDIOVASCULAR SYSTEM including the HEART; the BLOOD VESSELS; or the PERICARDIUM.
Disorder of cardiovascular system (disorder)
Disease affecting entire cardiovascular system[accessedResource: SNOMEDCT:105980002][accessDate: 10-05-2010]
Other diseases of pericardium
GeneRIF:15939053
SNOMEDCT:195588003
GeneRIF:12476328
GeneRIF:16102632
Other heart disease[accessedResource: SNOMEDCT:266309008][accessDate: 10-05-2010]
ICD9:429.2
GeneRIF:15627719
GeneRIF:15282206
Other ill-defined heart disease NOS (disorder)[accessedResource: SNOMEDCT:195150009][accessDate: 10-05-2010]
PAPILLARY MUSCLE DIS NEC
Other heart disease (disorder)[accessedResource: SNOMEDCT:266309008][accessDate: 10-05-2010]
SNOMEDCT:266309008
GeneRIF:12056504
Cardiovascular disorder, NOS[accessedResource: SNOMEDCT:49601007][accessDate: 10-05-2010]
[X]Other specified diseases of pericardium
CIRCULATORY DISEASE NOS
Disease of cardiovascular system, NOS[accessedResource: SNOMEDCT:49601007][accessDate: 10-05-2010]
GeneRIF:11935372
GeneRIF:12065317
Cardiovascular Disorders
GeneRIF:15340249
A body system disease which occurs in the blood, heart, blood vessels or the lymphatic system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells or lymph to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis.[accessedResource: DOID:1287][accessDate: 10-05-2010]
Other specified pericardial disease NOS (disorder)
ASCVD
A non-neoplastic or neoplastic disorder affecting the heart or the vessels (arteries, veins and lymph vessels). Representative examples of non-neoplastic cardiovascular disorders are endocarditis and hypertension. Representative examples of neoplastic cardiovascular disorders are endocardial myxoma and angiosarcoma. -- 2003
PAPILLARY MUSCLE DIS NEC[accessedResource: ICD9:429.81][accessDate: 10-05-2010]
Disorder of circulatory system, NOS[accessedResource: SNOMEDCT:49601007][accessDate: 10-05-2010]
GeneRIF:16161810
GeneRIF:15166781
Other ill-defined heart disease (disorder)[accessedResource: SNOMEDCT:266251004][accessDate: 10-05-2010]
ICD9:420-429.99
GeneRIF:12204797
Disorder of the circulatory system[accessedResource: SNOMEDCT:49601007][accessDate: 10-05-2010]
Disease of cardiovascular system
[X]Other forms of heart disease (disorder)
Pathological conditions involving the CARDIOVASCULAR SYSTEM including the HEART; the BLOOD VESSELS; or the PERICARDIUM.[accessedResource: MSH:D002318][accessDate: 10-05-2010]
GeneRIF:15856070
Other heart disease NOS[accessedResource: SNOMEDCT:195151008][accessDate: 10-05-2010]
GeneRIF:15780820
Other diseases of pericardium (disorder)[accessedResource: SNOMEDCT:194962004][accessDate: 10-05-2010]
ICD9:423
GeneRIF:15598684
Other diseases of endocardium (disorder)
Other ill-defined heart disease NOS
GeneRIF:15634270
[X]Other ill-defined heart diseases[accessedResource: SNOMEDCT:195588003][accessDate: 10-05-2010]
ICD9:429.8
SNOMEDCT:195553003
GeneRIF:12195022
CVS disease
GeneRIF:15619076
SNOMEDCT:105980002
SNOMEDCT:266241000
Cardiovascular Diseases
CARDIOVASC DIS[accessedResource: MSH:D002318][accessDate: 10-05-2010]
GeneRIF:15618240
GeneRIF:15116245
Disorder of circulatory system, NOS
GeneRIF:12606536
Other forms of heart disease[accessedResource: SNOMEDCT:194901009][accessDate: 10-05-2010]
[X]Cardiovascular disease, unspecified[accessedResource: SNOMEDCT:195594006][accessDate: 10-05-2010]
Cardiovascular disease, NOS
GeneRIF:12052841
SNOMEDCT:266251004
Other forms of heart disease (disorder)
Cardiovascular disease, NOS[accessedResource: SNOMEDCT:49601007][accessDate: 10-05-2010]
[X]Other ill-defined heart diseases
NCIt:C2931
GeneRIF:12431476
[X]Other specified diseases of pericardium (disorder)
Other forms of heart disease (disorder)[accessedResource: SNOMEDCT:194901009][accessDate: 10-05-2010]
GeneRIF:15302608
CVD[accessedResource: SNOMEDCT:49601007][accessDate: 10-05-2010]
GeneRIF:12365916
Cardiovascular system disease
GeneRIF:16103519
GeneRIF:12911596
GeneRIF:16224057
Other specified diseases of pericardium[accessedResource: ICD9:423.8][accessDate: 10-05-2010]
GeneRIF:15226189
Other diseases of pericardium (disorder)
SNOMEDCT:195151008
Unspecified circulatory system disorder[accessedResource: ICD9:459.9][accessDate: 10-05-2010]
GeneRIF:15576850
[X]Other forms of heart disease[accessedResource: SNOMEDCT:195551001][accessDate: 10-05-2010]
GeneRIF:15735209
ICD9:390-459.99
ICD9:429.89
Disorder of cardiovascular system
GeneRIF:15668644
Other ill-defined heart disease NOS (disorder)
GeneRIF:11821707
GeneRIF:15314690
GeneRIF:16159596
SNOMEDCT:195150009
Other heart disease (disorder)
A body system disease which occurs in the blood, heart, blood vessels or the lymphatic system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells or lymph to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis.
OTHER SEQUELAE OF MI NEC[accessedResource: ICD9:429.79][accessDate: 10-05-2010]
Other pericardial disease NOS (disorder)[accessedResource: SNOMEDCT:266240004][accessDate: 10-05-2010]
SNOMEDCT:49601007
ICD9:429.7
GeneRIF:15591764
Other ill-defined heart disease[accessedResource: SNOMEDCT:266251004][accessDate: 10-05-2010]
Unspecified circulatory system disorder
Disease affecting entire cardiovascular system
GeneRIF:15531184
[X]Other forms of heart disease
Circulatory system disease NOS[accessedResource: SNOMEDCT:195646003][accessDate: 10-05-2010]
SNOMEDCT:195594006
Circulatory system disease NOS (disorder)[accessedResource: SNOMEDCT:195646003][accessDate: 10-05-2010]
GeneRIF:11744804
GeneRIF:11934214
CVS disease[accessedResource: SNOMEDCT:49601007][accessDate: 10-05-2010]
GeneRIF:15648548
circulatory system disease
Circulatory system disease NOS (disorder)
GeneRIF:15565175
CVD, NOS[accessedResource: SNOMEDCT:49601007][accessDate: 10-05-2010]
Cardiovascular disease, unspecified
Other forms of heart disease
[X]Other ill-defined heart diseases (disorder)
ASCVD[accessedResource: ICD9:429.2][accessDate: 10-05-2010]
GeneRIF:15855354
A non-neoplastic or neoplastic disorder affecting the heart or the vessels (arteries, veins and lymph vessels). Representative examples of non-neoplastic cardiovascular disorders are endocarditis and hypertension. Representative examples of neoplastic cardiovascular disorders are endocardial myxoma and angiosarcoma.[accessedResource: NCIt:C2931][accessDate: 10-05-2010]
SNOMEDCT:194962004
Other heart disease NOS (disorder)[accessedResource: SNOMEDCT:195151008][accessDate: 10-05-2010]
ICD9:459.9
GeneRIF:15750260
Circulatory system disease NOS
Other heart disease
GeneRIF:16028070
GeneRIF:15528465
Other pericardial disease NOS[accessedResource: SNOMEDCT:266240004][accessDate: 10-05-2010]
Other sequelae of myocardial infarction, not elsewhere classified
Other specified diseases of pericardium
Other heart disease NOS
SNOMEDCT:195551001
ILL-DEFINED HRT DIS NEC[accessedResource: ICD9:429.89][accessDate: 10-05-2010]
disease of subdivision of hemolymphoid system[accessedResource: DOID:1287][accessDate: 10-05-2010]
GeneRIF:15683719
Other specified pericardial disease NOS (disorder)[accessedResource: SNOMEDCT:266239001][accessDate: 10-05-2010]
CARDIOVASC DIS
Other diseases of endocardium (disorder)[accessedResource: SNOMEDCT:266241000][accessDate: 10-05-2010]
Other pericardial disease NOS
GeneRIF:16109314
CIRCULATORY DISEASE NOS[accessedResource: ICD9:459.9][accessDate: 10-05-2010]
GeneRIF:15257013
SNOMEDCT:266240004
PERICARDIAL DISEASE NEC[accessedResource: ICD9:423.8][accessDate: 10-05-2010]
SNOMEDCT:194901009
A non-neoplastic or neoplastic disorder affecting the heart or the vessels (arteries, veins and lymph vessels). Representative examples of non-neoplastic cardiovascular disorders are endocarditis and hypertension. Representative examples of neoplastic cardiovascular disorders are endocardial myxoma and angiosarcoma.
GeneRIF:15240653
GeneRIF:12861348
GeneRIF:16046727
Cardiovascular Disorders[accessedResource: NCIt:C2931][accessDate: 10-05-2010]
Disorder of circulatory system[accessedResource: SNOMEDCT:49601007][accessDate: 10-05-2010]
GeneRIF:12187094
GeneRIF:12201209
CVD, NOS
Other diseases of endocardium
[X]Other specified diseases of pericardium[accessedResource: SNOMEDCT:195553003][accessDate: 10-05-2010]
GeneRIF:12743009
GeneRIF:11985486
[X]Other specified diseases of pericardium (disorder)[accessedResource: SNOMEDCT:195553003][accessDate: 10-05-2010]
DOID:1287
GeneRIF:16324215
Disorder of circulatory system
Other specified pericardial disease NOS[accessedResource: SNOMEDCT:266239001][accessDate: 10-05-2010]
GeneRIF:12898464
Other diseases of pericardium[accessedResource: SNOMEDCT:194962004][accessDate: 10-05-2010]
[X]Cardiovascular disease, unspecified (disorder)
GeneRIF:15010202
GeneRIF:15351863
Disorder of the circulatory system
James Malone
MSH:D002318
SNOMEDCT:266239001
Cardiovascular Diseases[accessedResource: NCIt:C2931][accessDate: 10-05-2010]
Disease of cardiovascular system[accessedResource: SNOMEDCT:49601007][accessDate: 10-05-2010]
GeneRIF:15653176
GeneRIF:15008790
Other ill-defined heart diseases
Other ill-defined heart disease (disorder)
[X]Other forms of heart disease (disorder)[accessedResource: SNOMEDCT:195551001][accessDate: 10-05-2010]
Disease of cardiovascular system (disorder)
Cardiovascular disorder
Disease affecting entire cardiovascular system (disorder)
GeneRIF:14983217
GeneRIF:16132053
Disease of cardiovascular system (disorder)[accessedResource: SNOMEDCT:49601007][accessDate: 10-05-2010]
GeneRIF:14998943
GeneRIF:12052142
[X]Other ill-defined heart diseases (disorder)[accessedResource: SNOMEDCT:195588003][accessDate: 10-05-2010]
PERICARDIAL DISEASE NEC
disease of subdivision of hemolymphoid system
Other ill-defined heart diseases[accessedResource: ICD9:429.89][accessDate: 10-05-2010]
GeneRIF:15342688
Other disorders of papillary muscle[accessedResource: ICD9:429.81][accessDate: 10-05-2010]
Disease of cardiovascular system, NOS
GeneRIF:12867276
GeneRIF:11912547
Disorder of cardiovascular system (disorder)[accessedResource: SNOMEDCT:49601007][accessDate: 10-05-2010]
GeneRIF:12690916
Other specified pericardial disease NOS
ILL-DEFINED HRT DIS NEC
cardiovascular disease
Cardiovascular disease, unspecified[accessedResource: ICD9:429.2][accessDate: 10-05-2010]
Disorder of cardiovascular system[accessedResource: SNOMEDCT:49601007][accessDate: 10-05-2010]
Other sequelae of myocardial infarction, not elsewhere classified[accessedResource: ICD9:429.79][accessDate: 10-05-2010]
GeneRIF:15823283
GeneRIF:16018179
GeneRIF:16159602
Cardiovascular disorder[accessedResource: SNOMEDCT:49601007][accessDate: 10-05-2010]
GeneRIF:11822583
Other pericardial disease NOS (disorder)
GeneRIF:16260427
GeneRIF:15869613
ICD9:429.81
GeneRIF:15859024
[X]Cardiovascular disease, unspecified
OTHER SEQUELAE OF MI NEC
Other ill-defined heart disease NOS[accessedResource: SNOMEDCT:195150009][accessDate: 10-05-2010]
ICD9:424
GeneRIF:15363820
Other ill-defined heart disease
true
UO:0000035
http://www.ebi.ac.uk/efo/EFO_0001726
A time unit which is approximately equal to the length of time of one of cycle of the moon's phases which is science is taken to be equal to 30 days.
A month is a derived time unit which is approximately equal to the length of time of one of cycle of the moon's phases which is science is taken to be equal to 30 days.
month
James Malone
FBbt:00005422
A0amnioser
A0amnioser[accessedResource: FBbt:00005422][accessDate: 10-05-2010]
amnioserosa anlage in statu nascendi
James Malone
http://www.ratmap.org/ShowStrainDetails.html?strain=72
F344
Fisher344 is a rat strain as described in http://www.ratmap.org/ShowStrainDetails.html?strain=72
Fischer 344
James Malone
A process whereby a stress state is applied parallel or tangential to a face of the material.
shear stressing
James Malone
RGD:1357955
Wistar-Furth
James Malone
phytogenic insecticides
http://www.ebi.ac.uk/efo/EFO_0001819
botanical insecticides
phytogenic insecticide
An insecticide compound naturally occurring in plants.
CHEBI:22917
James Malone
botanical insecticide
amoxicillin
CHEBI:2676
amoxicilina
Amopenixin
James Malone
6-(p-hydroxy-alpha-aminophenylacetamido)penicillanic acid
InChI=1/C16H19N3O5S/c1-16(2)11(15(23)24)19-13(22)10(14(19)25-16)18-12(21)9(17)7-3-5-8(20)6-4-7/h3-6,9-11,14,20H,17H2,1-2H3,(H,18,21)(H,23,24)/t9-,10-,11+,14-/m1/s1/f/h18,23H
amoxicillinum
amoxycillin
AX
(2S,5R,6R)-6-{[(2R)-2-amino-2-(4-hydroxyphenyl)acetyl]amino}-3,3-dimethyl-7-oxo-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylic acid
p-hydroxyampicillin
http://www.ebi.ac.uk/efo/EFO_0002003
C16H19N3O5S
6beta-[(2R)-2-amino-2-(4-hydroxyphenyl)acetamido]-2,2-dimethylpenam-3alpha-carboxylic acid
AMPC
Moxal
Amolin
A penicillin that has formula C16H19N3O5S.
amoxicilline
alpha-amino-p-hydroxybenzylpenicillin
A penicillin in which the substituent at position 6 of the penam ring is a 2-amino-2-(4-hydroxyphenyl)acetamido group.
Amoxicillin anhydrous
[H][C@]12SC(C)(C)[C@@H](N1C(=O)[C@H]2NC(=O)[C@H](N)c1ccc(O)cc1)C(O)=O
InChIKey=LSQZJLSUYDQPKJ-VLWBPTPADT
Clamoxyl
DOID:5864
dedifferentiated chondrosarcoma
James Malone
Dedifferentiated chondrosarcoma (morphologic abnormality)[accessedResource: DOID:5864][accessDate: 10-05-2010]
An aggressive morphologic variant of chondrosarcoma. It is composed of a low grade chondrosarcoma and a high grade non-cartilagenous sarcomatous component. Due to the aggressive nature of the disease, its prognosis is poor.[accessedResource: NCIt:C6476][accessDate: 10-05-2010]
SNOMEDCT:128776008
An aggressive morphologic variant of chondrosarcoma. It is composed of a low grade chondrosarcoma and a high grade non-cartilagenous sarcomatous component. Due to the aggressive nature of the disease, its prognosis is poor.
Dedifferentiated chondrosarcoma (morphologic abnormality)
NCIt:C6476
head and neck cancer, Thyroid[accessedResource: DOID:3963][accessDate: 10-05-2010]
thyroid carcinoma
DOID:3963
James Malone
head and neck cancer, Thyroid
thyroid cancer
http://www.arabidopsis.org/servlets/TairObject?id=1005158733&type=germplasm
CS57709 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158733&type=germplasm
CS57709
James Malone
animal reproductive system cell
http://www.arabidopsis.org/servlets/TairObject?id=1005158793&type=germplasm
CS57769 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158793&type=germplasm
CS57769
James Malone
SNOMEDCT:226097005
HF - High fat diet[accessedResource: SNOMEDCT:226097005][accessDate: 10-05-2010]
Jie Zheng
HF - High fat diet
High fat diet (finding)[accessedResource: SNOMEDCT:226097005][accessDate: 10-05-2010]
high fat diet
High fat diet (finding)
Tomasz Adamusiak
CC(C)c1cccc(C(C)C)c1O
Rapinovet
2,6-Diisopropylphenol
InChI=1/C12H18O/c1-8(2)10-6-5-7-11(9(3)4)12(10)13/h5-9,13H,1-4H3
A phenol that has formula C12H18O.
propofolum
2,6-bis(propan-2-yl)phenol
C12H18O
Diprivan
Disoprivan
http://www.ebi.ac.uk/efo/EFO_0001599
Disoprofol
propofol
2,6-bis(1-methylethyl)phenol
James Malone
CHEBI:44915
InChIKey=OLBCVFGFOZPWHH-UHFFFAOYAE
Mixed hyperlipidaemia[accessedResource: SNOMEDCT:267434003][accessDate: 10-05-2010]
GeneRIF:12401883
Hyperlipidemias, Familial Combined[accessedResource: MSH:D006950][accessDate: 10-05-2010]
GeneRIF:12738753
Multiple-type hyperlipidaemia[accessedResource: SNOMEDCT:267434003][accessDate: 10-05-2010]
type IIb hyperlipoproteinemia[accessedResource: DOID:13809][accessDate: 10-05-2010]
Type IIb Hyperlipoproteinemia
Familial multiple lipoprotein-type hyperlipidaemia[accessedResource: SNOMEDCT:299465007][accessDate: 10-05-2010]
Familial hyperlipoproteinaemia type IIb
GeneRIF:12468272
familial combined hyperlipidemia (disorder)
A type of familial lipid metabolism disorder characterized by a variable pattern of elevated plasma CHOLESTEROL and/or TRIGLYCERIDES. Multiple genes on different chromosomes may be involved, such as the major late transcription factor (UPSTREAM STIMULATORY FACTORS) on CHROMOSOME 1.[accessedResource: MSH:D006950][accessDate: 10-05-2010]
FCHL - Familial combined hyperlipidemia[accessedResource: SNOMEDCT:238040008][accessDate: 10-05-2010]
Fredrickson type IIb hyperlipoproteinemia[accessedResource: SNOMEDCT:238040008][accessDate: 10-05-2010]
Hyperapobetalipoproteinemia[accessedResource: SNOMEDCT:238040008][accessDate: 10-05-2010]
Multiple-type hyperlipidemia
mixed hyperlipidemia (disorder)[accessedResource: DOID:13809][accessDate: 10-05-2010]
Familial multiple lipoprotein-type hyperlipidemia (disorder)
ICD9:272.2
Familial multiple lipoprotein-type hyperlipidemia
A type of familial lipid metabolism disorder characterized by a variable pattern of elevated plasma CHOLESTEROL and/or TRIGLYCERIDES. Multiple genes on different chromosomes may be involved, such as the major late transcription factor (UPSTREAM STIMULATORY FACTORS) on CHROMOSOME 1.
Lipoprotein-Type Hyperlipidemia, Multiple
Familial combined hyperlipidemia (disorder)[accessedResource: SNOMEDCT:238040008][accessDate: 10-05-2010]
GeneRIF:16076849
Multiple-type hyperlipidaemia
Familial combined hyperlipidaemia
Familial multiple lipoprotein-type hyperlipidaemia
Hyperapobetalipoproteinaemia[accessedResource: SNOMEDCT:238040008][accessDate: 10-05-2010]
GeneRIF:15136067
Lipoprotein-Type Hyperlipidemia, Multiple[accessedResource: MSH:D006950][accessDate: 10-05-2010]
MSH:D006950
mixed hyperlipidemia (disorder)
Familial hyperlipoproteinemia type IIb
SNOMEDCT:267434003
familial combined hyperlipidemia (disorder) [Ambiguous]
Mixed hyperlipidemia
FCHL - Familial combined hyperlipidaemia
GeneRIF:12006395
GeneRIF:14680975
Hyperapobetalipoproteinemia
Fredrickson type IIb hyperlipoproteinaemia
Hyperapobetalipoproteinaemia
Familial hyperlipoproteinemia type IIb[accessedResource: SNOMEDCT:238040008][accessDate: 10-05-2010]
Multiple-type hyperlipidemia[accessedResource: SNOMEDCT:267434003][accessDate: 10-05-2010]
Familial combined hyperlipidaemia[accessedResource: SNOMEDCT:238040008][accessDate: 10-05-2010]
Combined Hyperlipidemias, Familial
hyperbetalipoproteinemia with prebetalipoproteinemia
familial combined hyperlipidemia (disorder) [Ambiguous][accessedResource: DOID:13809][accessDate: 10-05-2010]
DOID:13809
Mixed hyperlipidaemia
Familial multiple lipoprotein-type hyperlipidemia[accessedResource: SNOMEDCT:299465007][accessDate: 10-05-2010]
SNOMEDCT:238040008
familial combined hyperlipidemia
FCHL - Familial combined hyperlipidemia
FCHL - Familial combined hyperlipidaemia[accessedResource: SNOMEDCT:238040008][accessDate: 10-05-2010]
Fredrickson type IIb hyperlipoproteinemia
GeneRIF:14991056
James Malone
GeneRIF:12370850
SNOMEDCT:299465007
GeneRIF:15959806
Hyperlipidemias, Multiple Lipoprotein-Type[accessedResource: MSH:D006950][accessDate: 10-05-2010]
familial multiple lipoprotein-type hyperlipidemia (disorder)[accessedResource: DOID:13809][accessDate: 10-05-2010]
Familial hyperlipoproteinaemia type IIb[accessedResource: SNOMEDCT:238040008][accessDate: 10-05-2010]
Multiple Lipoprotein-Type Hyperlipidemias
Fredrickson type IIb hyperlipoproteinaemia[accessedResource: SNOMEDCT:238040008][accessDate: 10-05-2010]
GeneRIF:11979403
GeneRIF:15976322
hyperbetalipoproteinemia with prebetalipoproteinemia[accessedResource: DOID:13809][accessDate: 10-05-2010]
mixed hyperlipidemia[accessedResource: DOID:13809][accessDate: 10-05-2010]
SNOMEDCT:154771007
ICD9:273.4
DOID:13372
alpha-1-antitrypsin deficiency
Tomasz Adamusiak
Was originally considered to be a breast cancer cell line but has since been identified as a melanoma cell line.
MDAMB435
James Malone
ductal adenocarcinoma
Ductal Breast Carcinoma
Duct Carcinoma[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
Duct Carcinoma
Ductal Carcinoma of Breast
Ductal Carcinoma of Breast[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
Ductal Carcinoma of the Breast[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
A carcinoma arising from the ducts. While ductal carcinomas can arise at other sites, this term is universally used to refer to carcinomas of the breast. Ductal carcinomas account for about two thirds of all breast cancers. Two types of ductal carcinomas have been described: Ductal carcinoma in situ (DCIS) and invasive ductal carcinoma, not otherwise specified. The latter often spreads to the axillary lymph nodes and other anatomic sites. The two forms of ductal carcinoma often coexist.[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
Duct Adenocarcinoma
ductal breast carcinoma[accessedResource: DOID:3008][accessDate: 10-05-2010]
DOID:3008
James Malone
ductal carcinoma
Duct Adenocarcinoma[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
Ductal Carcinoma[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
NCIt:C4017
Ductal Carcinoma of the Breast
A carcinoma arising from the ducts. While ductal carcinomas can arise at other sites, this term is universally used to refer to carcinomas of the breast. Ductal carcinomas account for about two thirds of all breast cancers. Two types of ductal carcinomas have been described: Ductal carcinoma in situ (DCIS) and invasive ductal carcinoma, not otherwise specified. The latter often spreads to the axillary lymph nodes and other anatomic sites. The two forms of ductal carcinoma often coexist.
A g1e er4 is a GATA-1-null erythroblast.
G1E-ER4
Natural Language Generator 8th April 2010
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158766&type=germplasm
CS57742 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158766&type=germplasm
CS57742
James Malone
Stria terminalis nucleus
MA:0000925
Intercalate nucleus of stria terminalis[accessedResource: FMA:61884][accessDate: 10-05-2010]
Nucleus of stria terminalis[accessedResource: FMA:61884][accessDate: 10-05-2010]
Stria terminalis nucleus[accessedResource: FMA:61884][accessDate: 10-05-2010]
Nuclei of stria terminalis[accessedResource: FMA:61884][accessDate: 10-05-2010]
FMA:61884
Nucleus of stria terminalis
Intercalate nucleus of stria terminalis
Bed nucleus of stria terminalis[accessedResource: FMA:61884][accessDate: 10-05-2010]
nucleus of terminal stria
Bed nucleus of stria terminalis
Nuclei of stria terminalis
dexametasona
http://www.ebi.ac.uk/efo/EFO_0001519
A fluorinated steroid that has formula C22H29FO5.
Decadron
16alpha-Methyl-9alpha-fluoro-1-dehydrocortisol
[H][C@@]12C[C@@H](C)[C@](O)(C(=O)CO)[C@@]1(C)C[C@H](O)[C@@]1(F)[C@@]2([H])CCC2=CC(=O)C=C[C@]12C
9alpha-Fluoro-16alpha-methylprednisolone
C22H29FO5
dexamethasone
CHEBI:41879
InChI=1/C22H29FO5/c1-12-8-16-15-5-4-13-9-14(25)6-7-19(13,2)21(15,23)17(26)10-20(16,3)22(12,28)18(27)11-24/h6-7,9,12,15-17,24,26,28H,4-5,8,10-11H2,1-3H3/t12-,15+,16+,17+,19+,20+,21+,22+/m1/s1
InChIKey=UREBDLICKHMUKA-CXSFZGCWBM
dexamethasonum
James Malone
9-fluoro-11beta,17,21-trihydroxy-16alpha-methylpregna-1,4-diene-3,20-dione
1-Dehydro-16alpha-methyl-9alpha-fluorohydrocortisone
BTO:0000252
The outer membrane of the two membranes enclosing the embryo in reptiles, birds, and mammals. In placental mammals it contributes to the development of the placenta.
The chorion is one of the membranes that exists during pregnancy between the developing fetus and mother. It is formed by extraembryonic mesoderm and the two layers of trophoblast and surrounds the embryo and other membranes.
The outer membrane of the two membranes enclosing the embryo in reptiles, birds, and mammals. In placental mammals it contributes to the development of the placenta.[accessedResource: BTO:0000252][accessDate: 10-05-2010]
chorion
James Malone
NCIt:C27837
Crohn's disease
DOID:4039
James Malone
Crohn's Associated Gastritis
Gastritis Associated with Crohn Disease[accessedResource: NCIt:C27837][accessDate: 10-05-2010]
Gastritis Associated with Crohn's Disease
Crohn's Associated Gastritis[accessedResource: NCIt:C27837][accessDate: 10-05-2010]
Gastritis Associated with Crohn's Disease[accessedResource: NCIt:C27837][accessDate: 10-05-2010]
Gastritis Associated with Crohn Disease
iberin
MAT:0000415
James Malone
The lower part of the axis of a plant embryo or seedling.[accessedResource: BTO:0001152][accessDate: 10-05-2010]
BTO:0001152
The lower part of the axis of a plant embryo or seedling.
radicle
PO:0020031
Ele Holloway
A498
James Malone
PC-7
James Malone
Ele Holloway
Precentral convolution
precentral gyrus
James Malone
Prerolandic gyrus[accessedResource: FMA:61894][accessDate: 10-05-2010]
FMA:61894
Prerolandic gyrus
NCIt:C33393
Precentral convolution[accessedResource: FMA:61894][accessDate: 10-05-2010]
PMID: 11246871
nestin positive islet-derived progenitor cell
Tomasz Adamusiak
Jie Zheng
Selen
Se
James Malone
InChI=1/Se
A chalcogen that has formula Se.
selenium
selenium atom
http://www.ebi.ac.uk/efo/EFO_0001610
selenio
InChIKey=BUGBHKTXTAQXES-UHFFFAOYAK
CHEBI:27568
34Se
James Malone
FBbt:00001716
BTO:0000291
One of a pair of separate or fused bodies in many insects that are sometimes closely associated with the corpora cardiaca and that secrete hormones (as juvenile hormone).
MAT:0000210
FBbt:00005800
corpus allatum
corpora allata
A neurosecretory organ forming part of the retrocerebral complex.[accessedResource: FBbt:00005800][accessDate: 10-05-2010]
A neurosecretory organ forming part of the retrocerebral complex.
One of a pair of separate or fused bodies in many insects that are sometimes closely associated with the corpora cardiaca and that secrete hormones (as juvenile hormone).[accessedResource: BTO:0000291][accessDate: 10-05-2010]
corpora allata[accessedResource: BTO:0000291][accessDate: 10-05-2010]
BTO:0001231
Gasserian ganglion
A prominent collection of touch-sensory neurons of the trigeminal or fifth cranial nerve, positioned beside the brain between the eye and the ear. Kimmel et al, 1995.
gV[accessedResource: TAO:0000295][accessDate: 10-05-2010]
ganglion of trigeminal nerve
James Malone
EV:0100491
FMAID:52618
Gasser's ganglion[accessedResource: BTO:0001231][accessDate: 10-05-2010]
ganglion of trigeminal nerve[accessedResource: BTO:0001231][accessDate: 10-05-2010]
A prominent collection of touch-sensory neurons of the trigeminal or fifth cranial nerve, positioned beside the brain between the eye and the ear. Kimmel et al, 1995.[accessedResource: TAO:0000295][accessDate: 10-05-2010]
TAO:0000295
MA:0001080
Semilunar ganglion
XAO:0000428
Gasserian ganglion[accessedResource: FMAID:52618][accessDate: 10-05-2010]
MAT:0000511
A ganglion on the sensory root of the fifth cranial nerve, situated in a cleft within the dura mater (trigeminal cave) on the anterior surface of the petrous portion of the temporal bone, and giving off the ophthalmic and maxillary and part of the mandibular nerve; it contains the cells of origin of most of the sensory fibers of the trigeminal nerve.[accessedResource: BTO:0001231][accessDate: 10-05-2010]
gV
Gasser's ganglion
A ganglion on the sensory root of the fifth cranial nerve, situated in a cleft within the dura mater (trigeminal cave) on the anterior surface of the petrous portion of the temporal bone, and giving off the ophthalmic and maxillary and part of the mandibular nerve; it contains the cells of origin of most of the sensory fibers of the trigeminal nerve.
ganglion trigeminale
ganglion trigeminale[accessedResource: BTO:0001231][accessDate: 10-05-2010]
Semilunar ganglion[accessedResource: FMAID:52618][accessDate: 10-05-2010]
trigeminal ganglion
CHEBI:50148
fenpropimorph
4-[3-[4-(1,1-dimethylethyl)phenyl]-2-methylpropyl]-2,6-dimethylmorpholine
InChI=1/C20H33NO/c1-15(12-21-13-16(2)22-17(3)14-21)11-18-7-9-19(10-8-18)20(4,5)6/h7-10,15-17H,11-14H2,1-6H3
A morpholine that has formula C20H33NO.
Mistral
http://www.ebi.ac.uk/efo/EFO_0002408
James Malone
Corbel
CC(CN1CC(C)OC(C)C1)Cc1ccc(cc1)C(C)(C)C
C20H33NO
4-[3-(4-tert-butylphenyl)-2-methylpropyl]-2,6-dimethylmorpholine
InChIKey=RYAUSSKQMZRMAI-UHFFFAOYAY
Ele Holloway
foetal structure
http://www.arabidopsis.org/servlets/TairObject?id=1005158687&type=germplasm
CS57663 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158687&type=germplasm
CS57663
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158567&type=germplasm
CS57543 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158567&type=germplasm
CS57543
James Malone
GRO:0005358[accessedResource: BTO:0000300][accessDate: 10-05-2010]
cotyledon
PO:0020030
BTO:0000300
GRO:0005358
James Malone
A seed leaf; the first leaf formed in a seed.[accessedResource: BTO:0000300][accessDate: 10-05-2010]
MAT:0000359
A seed leaf; the first leaf formed in a seed.
NCIH838
James Malone
Ele Holloway
MO_560
genotyping design
Tomasz Adamusiak
true
MO_771
gene knock out
Tomasz Adamusiak
Jie Zheng
NCIt:C37417
NOD
NOD[accessedResource: NCIt:C37417][accessDate: 10-05-2010]
NOD mouse
Tomasz Adamusiak
Jie Zheng
tumour of cranial and spinal nerves
Tomasz Adamusiak
James Malone
NCIH446
James Malone
Ele Holloway
ZFS:0000015
blastula dome
James Malone
excitatory amino acid agonists
http://www.ebi.ac.uk/efo/EFO_0001882
CHEBI:50103
An agent that binds to and activates excitatory amino acid receptors.
excitatory amino acid agonist
James Malone
InChIKey=QKSKPIVNLNLAAV-UHFFFAOYAK
bis(2-chloroethyl) sulphide
sulfur mustard
Lost
Yperite
bis(2-chloroethyl) sulfide
1-chloro-2-[(2-chloroethyl)thio]ethane
James Malone
bis(2-chloroethyl)sulfane
mustard gas
1,1'-thiobis(2-chloroethane)
ClCCSCCCl
Senfgas
InChI=1/C4H8Cl2S/c5-1-3-7-4-2-6/h1-4H2
CHEBI:25434
An ethyl sulfide that has formula C4H8Cl2S.
C4H8Cl2S
http://www.ebi.ac.uk/efo/EFO_0001492
1-chloro-2-[(2-chloroethyl)sulfanyl]ethane
Asians[accessedResource: NCIt:C41260][accessDate: 10-05-2010]
NCIt:C41260
Asians
Jie Zheng
Denotes a person having origins in any of the original peoples of the Far East, Southeast Asia, or the Indian subcontinent, including Cambodia, China, India, Japan, Korea, Malaysia, Mongolia, Pakistan, the Philippine Islands, Thailand, and Vietnam.[accessedResource: NCIt:C41260][accessDate: 10-05-2010]
Tomasz Adamusiak
Denotes a person having origins in any of the original peoples of the Far East, Southeast Asia, or the Indian subcontinent, including Cambodia, China, India, Japan, Korea, Malaysia, Mongolia, Pakistan, the Philippine Islands, Thailand, and Vietnam.
Asian
CHEBI:28285
http://www.ebi.ac.uk/efo/EFO_0001585
oligomycin A
TANOUE
James Malone
Ele Holloway
CL:0000081
A cell found predominately in the blood.
A cell found predominately in the blood.[accessedResource: CL:0000081][accessDate: 10-05-2010]
blood cell
Tomasz Adamusiak
MO_930
http://www.ebi.ac.uk/efo/EFO_0002022
An instrument used to chemically synthesize oligonucleotides.
oligonucleotide synthesizer
James Malone
NCI Metathesaurus: C0318594
Drosophila C virus
James Malone
UMUC3
James Malone
Ele Holloway
sodium (o-(2,6-dichloroanilino)phenyl)acetate
(o-(2,6-dichloroanilino)phenyl)acetic acid monosodium salt
http://www.ebi.ac.uk/efo/EFO_0001520
(o-(2,6-dichloroanilino)phenyl)acetic acid sodium salt
InChI=1/C14H11Cl2NO2.Na/c15-10-5-3-6-11(16)14(10)17-12-7-2-1-4-9(12)8-13(18)19;/h1-7,17H,8H2,(H,18,19);/q;+1/p-1/fC14H10Cl2NO2.Na/q-1;m
[Na+].[O-]C(=O)Cc1ccccc1Nc1c(Cl)cccc1Cl
C14H10Cl2NO2.Na
2-((2,6-dichlorophenyl)amino)benzeneacetic acid monosodium salt
sodium {2-[(2,6-dichlorophenyl)amino]phenyl}acetate
InChIKey=KPHWPUGNDIVLNH-VDPPZFTLCG
diclofenac sodium
sodium (o-((2,6-dichlorophenyl)amino)phenyl)acetate
C14H10Cl2NNaO2
The sodium salt of diclofenac.
An organic sodium salt that has formula C14H10Cl2NNaO2.
CHEBI:4509
Cell line derived from squamous cell carcinoma of the hypopharynx.
James Malone
Ele Holloway
FaDu
BTO:0000258
The choroid plexus is tissue located in the spaces inside the brain called ventricles. The choroid plexus makes the fluid that fills the ventricles and surrounds the brain and spinal cord.
The choroid plexus is a brain structure located in the spaces inside the brain called ventricles. The choroid plexus makes the fluid that fills the ventricles and surrounds the brain and spinal cord.
The choroid plexus is tissue located in the spaces inside the brain called ventricles. The choroid plexus makes the fluid that fills the ventricles and surrounds the brain and spinal cord.[accessedResource: BTO:0000258][accessDate: 10-05-2010]
choroid plexus
James Malone
Tomasz Adamusiak
FMAID:5888
dorsal root ganglion
SAEL:30
WBbt:0005189
Spinal ganglion[accessedResource: FMAID:5888][accessDate: 10-05-2010]
Trunk ganglion which is located adjacent to the spine on a dorsal root and contains the cell bodies of afferent sensory nerves.
EMAPA:18372
dorsal root ganglia
Trunk ganglion which is located adjacent to the spine on a dorsal root and contains the cell bodies of afferent sensory nerves.[accessedResource: ZFA:0000200][accessDate: 10-05-2010]
NIFSTD:birnlex_2596
EMAPA:16668
DRG[accessedResource: TAO:0000200][accessDate: 10-05-2010]
MA:0000232
Spinal ganglion
Ganglion spinalis[accessedResource: FMAID:5888][accessDate: 10-05-2010]
EVM:2000213
DRG
ZFA:0000200
dorsal root ganglia[accessedResource: TAO:0000200][accessDate: 10-05-2010]
Ganglion spinalis
MAT:0000162
EHDAA:2899
James Malone
TAO:0000200
NALM6
James Malone
Ele Holloway
Doconexent
(4Z,7Z,10Z,13Z,16Z,19Z)-Docosahexaenoic acid
CC\\C=C/C\\C=C/C\\C=C/C\\C=C/C\\C=C/C\\C=C/CCC(O)=O
CHEBI:28125
C22H32O2
A docosahexaenoic acid that has formula C22H32O2.
DOCOSA-4,7,10,13,16,19-HEXAENOIC ACID
Docosahexaenoic acid
all-cis-docosa-4,7,10,13,16,19-hexaenoic acid
InChIKey=MBMBGCFOFBJSGT-YALXRAKKDU
(4Z,7Z,10Z,13Z,16Z,19Z)-docosa-4,7,10,13,16,19-hexaenoic acid
InChI=1/C22H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-22(23)24/h3-4,6-7,9-10,12-13,15-16,18-19H,2,5,8,11,14,17,20-21H2,1H3,(H,23,24)/b4-3-,7-6-,10-9-,13-12-,16-15-,19-18-/f/h23H
http://www.ebi.ac.uk/efo/EFO_0001480
GeneRIF:12185581
GeneRIF:12154078
DOID:769
GeneRIF:15328517
GeneRIF:15644444
GeneRIF:11807986
GeneRIF:14663483
GeneRIF:12557224
GeneRIF:15930276
GeneRIF:12118090
GeneRIF:12438307
Neuroblastoma, NOS[accessedResource: SNOMEDCT:87364003][accessDate: 10-05-2010]
GeneRIF:11861392
NIFSTD:birnlex_12631
GeneRIF:16177824
GeneRIF:16125842
GeneRIF:16051641
GeneRIF:15849504
Tomasz Adamusiak
GeneRIF:15375504
Neuroblastomas[accessedResource: MSH:D009447][accessDate: 10-05-2010]
GeneRIF:16092940
GeneRIF:14745549
GeneRIF:12031683
GeneRIF:12916719
GeneRIF:12829373
neuroblastoma (morphologic abnormality)[accessedResource: DOID:769][accessDate: 10-05-2010]
[M]Neuroblastoma NOS
GeneRIF:11877677
Sympathicoblastoma[accessedResource: SNOMEDCT:87364003][accessDate: 10-05-2010]
GeneRIF:12209604
GeneRIF:11737230
neuroblastoma (morphologic abnormality)
GeneRIF:12545167
GeneRIF:15607966
Sympathicoblastoma
[M]Neuroblastoma NOS[accessedResource: SNOMEDCT:269507008][accessDate: 10-05-2010]
GeneRIF:15322424
GeneRIF:12808116
GeneRIF:12576454
GeneRIF:12962147
GeneRIF:12598334
GeneRIF:15015775
GeneRIF:12239177
Neuroblastoma, NOS
GeneRIF:15547663
GeneRIF:12884264
GeneRIF:11877670
GeneRIF:15741235
GeneRIF:16228012
GeneRIF:15168079
Neuroblastoma (Schwannian Stroma-Poor)[accessedResource: NCIt:C3270][accessDate: 10-05-2010]
NCIt:C3270
James Malone
GeneRIF:15136145
GeneRIF:11836564
GeneRIF:15280446
neuroblastoma NOS (morphologic abnormality)[accessedResource: DOID:769][accessDate: 10-05-2010]
GeneRIF:14654552
SNOMEDCT:87364003
GeneRIF:14995074
GeneRIF:12907629
GeneRIF:15166121
GeneRIF:15827327
GeneRIF:11870543
GeneRIF:11744098
GeneRIF:16091745
GeneRIF:13679866
A common neoplasm of early childhood arising from neural crest cells in the sympathetic nervous system, and characterized by diverse clinical behavior, ranging from spontaneous remission to rapid metastatic progression and death. This tumor is the most common intraabdominal malignancy of childhood, but it may also arise from thorax, neck, or rarely occur in the central nervous system. Histologic features include uniform round cells with hyperchromatic nuclei arranged in nests and separated by fibrovascular septa. Neuroblastomas may be associated with the opsoclonus-myoclonus syndrome (MeSH).[accessedResource: NIFSTD:birnlex_12631][accessDate: 10-05-2010]
GeneRIF:15488758
GeneRIF:12675130
GeneRIF:15882878
GeneRIF:12647219
GeneRIF:16232196
GeneRIF:12629151
GeneRIF:15117961
GeneRIF:15240516
GeneRIF:12174591
A neuroblastic tumor characterized by the presence of neuroblastic cells, the absence of ganglion cells, and the absence of a prominent Schwannian stroma formation.
GeneRIF:15650242
Central neuroblastoma[accessedResource: SNOMEDCT:87364003][accessDate: 10-05-2010]
[M]Neuroblastoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:269507008][accessDate: 10-05-2010]
GeneRIF:15218241
GeneRIF:12964007
neuroblastoma
GeneRIF:15486895
GeneRIF:11705866
NB - Neuroblastoma
Central neuroblastoma
GeneRIF:14719101
GeneRIF:12629521
GeneRIF:15719172
GeneRIF:12888911
GeneRIF:15518890
GeneRIF:12593854
Neuroblastoma (Schwannian Stroma-Poor)
GeneRIF:15514946
GeneRIF:15994346
MSH:D009447
GeneRIF:15083193
GeneRIF:15316056
A common neoplasm of early childhood arising from neural crest cells in the sympathetic nervous system, and characterized by diverse clinical behavior, ranging from spontaneous remission to rapid metastatic progression and death. This tumor is the most common intraabdominal malignancy of childhood, but it may also arise from thorax, neck, or rarely occur in the central nervous system. Histologic features include uniform round cells with hyperchromatic nuclei arranged in nests and separated by fibrovascular septa. Neuroblastomas may be associated with the opsoclonus-myoclonus syndrome. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2099-2101; Curr Opin Oncol 1998 Jan;10(1):43-51)
A neuroblastic tumor characterized by the presence of neuroblastic cells, the absence of ganglion cells, and the absence of a prominent Schwannian stroma formation.[accessedResource: NCIt:C3270][accessDate: 10-05-2010]
GeneRIF:16098972
GeneRIF:15004408
GeneRIF:15998644
GeneRIF:15024693
GeneRIF:15448191
neuroblastoma NOS (morphologic abnormality)
GeneRIF:14645238
NB - Neuroblastoma[accessedResource: SNOMEDCT:87364003][accessDate: 10-05-2010]
GeneRIF:11928813
GeneRIF:14724587
[M]Neuroblastoma NOS (morphologic abnormality)
GeneRIF:15516980
GeneRIF:12163469
(Neuroblastoma NOS) or (sympathicoblastoma)
GeneRIF:12085233
GeneRIF:12672031
GeneRIF:11782392
A common neoplasm of early childhood arising from neural crest cells in the sympathetic nervous system, and characterized by diverse clinical behavior, ranging from spontaneous remission to rapid metastatic progression and death. This tumor is the most common intraabdominal malignancy of childhood, but it may also arise from thorax, neck, or rarely occur in the central nervous system. Histologic features include uniform round cells with hyperchromatic nuclei arranged in nests and separated by fibrovascular septa. Neuroblastomas may be associated with the opsoclonus-myoclonus syndrome. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2099-2101; Curr Opin Oncol 1998 Jan;10(1):43-51)[accessedResource: MSH:D009447][accessDate: 10-05-2010]
GeneRIF:16007146
GeneRIF:14988008
GeneRIF:15618969
GeneRIF:16166307
GeneRIF:11859407
GeneRIF:12717420
(neuroblastoma NOS) or (sympathicoblastoma)[accessedResource: DOID:769][accessDate: 10-05-2010]
Neuroblastomas
A common neoplasm of early childhood arising from neural crest cells in the sympathetic nervous system, and characterized by diverse clinical behavior, ranging from spontaneous remission to rapid metastatic progression and death. This tumor is the most common intraabdominal malignancy of childhood, but it may also arise from thorax, neck, or rarely occur in the central nervous system. Histologic features include uniform round cells with hyperchromatic nuclei arranged in nests and separated by fibrovascular septa. Neuroblastomas may be associated with the opsoclonus-myoclonus syndrome (MeSH).
GeneRIF:11881792
SNOMEDCT:269507008
GeneRIF:15735700
colorectal carcinoma
James Malone
adipocyte[accessedResource: CL:0000136][accessDate: 10-05-2010]
A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of triglycerides.[accessedResource: CL:0000136][accessDate: 10-05-2010]
James Malone
lipocyte
adipocyte
lipocyte[accessedResource: CL:0000136][accessDate: 10-05-2010]
fat cell
A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of tryglycerides.
CL:0000136
A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of triglycerides.
FBbt:00001720
embryonic corpus cardiacum
James Malone
Panc1
Ele Holloway
James Malone
PANC-1
JRT3T35
James Malone
Ele Holloway
InChI=1/C20H24ClN3S/c1-22-11-13-23(14-12-22)9-4-10-24-17-5-2-3-6-19(17)25-20-8-7-16(21)15-18(20)24/h2-3,5-8,15H,4,9-14H2,1H3
A N-methylpiperazine that has formula C20H24ClN3S.
proclorperazina
prochlorperazine
C20H24ClN3S
2-chloro-10-[3-(4-methylpiperazin-1-yl)propyl]-10H-phenothiazine
Procloperazine
CHEBI:8435
N-(gamma-(4'-Methylpiperazinyl-1')propyl)-3-chlorophenothiazine
2-Chloro-10-(3-(4-methyl-1-piperazinyl)propyl)phenothiazine
Chloro-3 (N-methylpiperazinyl-3 propyl)-10 phenothiazine
A phenothiazine derivative having a chloro subsitituent at the 2-position and a 3-(4-methylpiperazin-1-yl)propyl group at the N-10 position.
Prochlorpermazine
3-Chloro-10-(3-(1-methyl-4-piperazinyl)propyl)phenothiazine
prochlorperazinum
James Malone
http://www.ebi.ac.uk/efo/EFO_0001597
Prochlorperazin
InChIKey=WIKYUJGCLQQFNW-UHFFFAOYAF
Prochlorpromazine
CN1CCN(CCCN2c3ccccc3Sc3ccc(Cl)cc23)CC1
PERSON: James Malone
Time of survival is an information entity which is about the length of time a material entity has survived after some adverse event, such as infection from a disease.
time of survival
James Malone
http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
Simpson E. M., Linder C. C., Sargent E. E., Davisson M. T., Mobraaten L. E., and Sharp J. J. (1997) Genetic variation among 129 substrains and its importance for targeted mutagenesis in mice. Nature Genet. 16, 19-27.
129 is a mouse strain as described in Jackson Laboratory http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
129 mouse strain
James Malone
In most female insects, an ectodermal pouch derived from the posteroventral part of abdominal segment VIII (possibly IX in some insects) and sometimes adjacent parts of the abdominal venter; ending anteriorly at the posterior end of the common oviduct. In mosquitoes and some other insects, the roof of the vagina is formed by the venter of abdominal segment IX; partially divided transversely by the spermathecal eminence and sometimes the upper vaginal sclerites.
Organ with organ cavity which connects the cervical canal of uterus to the vestibule of vagina. Examples: There is only one vagina.[accessedResource: FMAID:19949][accessDate: 10-05-2010]
"genital atrium"[accessedResource: TGMA:0000607][accessDate: 10-05-2010]
"bursa copulatrix"[accessedResource: TGMA:0000607][accessDate: 10-05-2010]
"gemeinsamer Geschlechtsgang"[accessedResource: TGMA:0000607][accessDate: 10-05-2010]
In most female insects, an ectodermal pouch derived from the posteroventral part of abdominal segment VIII (possibly IX in some insects) and sometimes adjacent parts of the abdominal venter; ending anteriorly at the posterior end of the common oviduct. In mosquitoes and some other insects, the roof of the vagina is formed by the venter of abdominal segment IX; partially divided transversely by the spermathecal eminence and sometimes the upper vaginal sclerites.[accessedResource: TGMA:0000607][accessDate: 10-05-2010]
FMAID:19949
"vaginal atrium"[accessedResource: TGMA:0000607][accessDate: 10-05-2010]
MAT:0000128
"genital orifice"
"gemeinsamer Geschlechtsgang"
BTO:0000243
"genital chamber"[accessedResource: TGMA:0000607][accessDate: 10-05-2010]
"vaginal atrium"
FBbt:00004925
James Malone
"genital orifice"[accessedResource: TGMA:0000607][accessDate: 10-05-2010]
EMAPA:18986
Organ with organ cavity which connects the cervical canal of uterus to the vestibule of vagina. Examples: There is only one vagina.
MA:0000394
"genital chamber"
"caecum"[accessedResource: TGMA:0000607][accessDate: 10-05-2010]
"atrium"
"upper atrium"
TGMA:0000607
"upper atrium"[accessedResource: TGMA:0000607][accessDate: 10-05-2010]
A canal in a female mammal that leads from the uterus to the external orifice of the genital canal.[accessedResource: BTO:0000243][accessDate: 10-05-2010]
"atrium"[accessedResource: TGMA:0000607][accessDate: 10-05-2010]
"bursa"
EV:0100117
"bursa"[accessedResource: TGMA:0000607][accessDate: 10-05-2010]
"lower atrium"[accessedResource: TGMA:0000607][accessDate: 10-05-2010]
"caecum"
"bursa copulatrix"
"genital atrium"
TADS:0000441
vagina
A canal in a female mammal that leads from the uterus to the external orifice of the genital canal.
"lower atrium"
Organ component of neuraxis that has as its parts the pons, cerebellum and medulla oblongata . Examples: There is only one hindbrain.
TAO:0000029
James Malone
ZFA:0000029
SAEL:50
FMAID:67687
The posterior of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain that includes the cerebellum, the medulla oblongata, and in mammals the pons and that controls autonomic functions and equilibrium.[accessedResource: BTO:0000672][accessDate: 10-05-2010]
The most posterior of the three principal regions of the brain, forming the rhombencephalon and all or most of the metencephalon. Kimmel et al, 1995.[accessedResource: TAO:0000029][accessDate: 10-05-2010]
MA:0000195
rhombencephalon
MAT:0000107
XAO:0000015
The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished here. From Neuroanatomy of the Zebrafish Brain.
Tomasz Adamusiak
The most posterior of the three principal regions of the brain, forming the rhombencephalon and all or most of the metencephalon. Kimmel et al, 1995.
rhombencephalon[accessedResource: BTO:0000672][accessDate: 10-05-2010]
EMAPA:16916
EHDAA:3514
MFO:0002340
NIFSTD:birnlex_942
Organ component of neuraxis that has as its parts the pons, cerebellum and medulla oblongata . Examples: There is only one hindbrain.[accessedResource: FMAID:67687][accessDate: 10-05-2010]
The posterior of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain that includes the cerebellum, the medulla oblongata, and in mammals the pons and that controls autonomic functions and equilibrium.
hindbrain
BTO:0000672
The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished here. From Neuroanatomy of the Zebrafish Brain.[accessedResource: ZFA:0000029][accessDate: 10-05-2010]
cyclooxygenase inhibitors
http://www.ebi.ac.uk/efo/EFO_0001845
CHEBI:35544
A compound or agent that combines with cyclooxygenases and thereby prevents its substrate-enzyme combination with arachidonic acid and the formation of eicosanoids, prostaglandins, and thromboxanes.
cyclooxygenase inhibitor
James Malone
ZFS:0000030
pharyngula prim-15
James Malone
cysteine
C3H7NO2S
L-2-Amino-3-mercaptopropionic acid
C
FREE CYSTEINE
(2R)-2-amino-3-sulfanylpropanoic acid
L-cysteine
N[C@@H](CS)C(O)=O
L-Zystein
InChIKey=XUJNEKJLAYXESH-SNQCPAJUDK
CHEBI:17561
http://www.ebi.ac.uk/efo/EFO_0001516
(2R)-2-amino-3-mercaptopropanoic acid
(R)-2-amino-3-mercaptopropanoic acid
Cys
L-Cystein
InChI=1/C3H7NO2S/c4-2(1-7)3(5)6/h2,7H,1,4H2,(H,5,6)/t2-/m0/s1/f/h5H
A cysteine that has formula C3H7NO2S.
Multiple system atrophy (disorder)[accessedResource: DOID:4752][accessDate: 10-05-2010]
Tomasz Adamusiak
Multisystemic Atrophy
James Malone
A syndrome complex composed of three conditions which represent clinical variants of the same disease process: STRIATONIGRAL DEGENERATION; SHY-DRAGER SYNDROME; and the sporadic form of OLIVOPONTOCEREBELLAR ATROPHIES. Clinical features include autonomic, cerebellar, and basal ganglia dysfunction. Pathologic examination reveals atrophy of the basal ganglia, cerebellum, pons, and medulla, with prominent loss of autonomic neurons in the brain stem and spinal cord (MeSH).
Ele Holloway
Multisystem Atrophy
multiple system atrophy
DOID:4752
NIFSTD:birnlex_12573
A syndrome complex composed of three conditions which represent clinical variants of the same disease process: STRIATONIGRAL DEGENERATION; SHY-DRAGER SYNDROME; and the sporadic form of OLIVOPONTOCEREBELLAR ATROPHIES. Clinical features include autonomic, cerebellar, and basal ganglia dysfunction. Pathologic examination reveals atrophy of the basal ganglia, cerebellum, pons, and medulla, with prominent loss of autonomic neurons in the brain stem and spinal cord (MeSH).[accessedResource: NIFSTD:birnlex_12573][accessDate: 10-05-2010]
Multisystemic Atrophy[accessedResource: NIFSTD:birnlex_12573][accessDate: 10-05-2010]
Multiple System Atrophy Syndrome
Multisystem Atrophy[accessedResource: NIFSTD:birnlex_12573][accessDate: 10-05-2010]
Multiple system atrophy (disorder)
Multiple System Atrophy Syndrome[accessedResource: NIFSTD:birnlex_12573][accessDate: 10-05-2010]
Anal canal viewed anatomically
Anal canal
anal region
anal pad[accessedResource: MAT:0000042][accessDate: 10-05-2010]
Anatomical anal canal[accessedResource: FMAID:15703][accessDate: 10-05-2010]
EV:0100082
The anus is situated in a small area of membrane between the bases of the cerci.
XAO:0000244
cloacal chamber
The anus is situated in a small area of membrane between the bases of the cerci.[accessedResource: TGMA:0001279][accessDate: 10-05-2010]
FBbt:00005785
EMAPA:16831
Anal canal viewed anatomically[accessedResource: FMAID:15703][accessDate: 10-05-2010]
FMAID:15703
cloacal chamber[accessedResource: MAT:0000042][accessDate: 10-05-2010]
James Malone
anal pad
MAT:0000042
Anatomical anal canal
ZFA:0000330
cloaca[accessedResource: MAT:0000042][accessDate: 10-05-2010]
cloaca
anus
MA:0000328
TGMA:0001279
Anal canal[accessedResource: FMAID:15703][accessDate: 10-05-2010]
anus[accessedResource: MAT:0000042][accessDate: 10-05-2010]
Organ with organ cavity which is continuous proximally with the rectum and distally terminates with the anus. Examples: There is only one anal canal.[accessedResource: FMAID:15703][accessDate: 10-05-2010]
SAEL:5
WBbt:0005774
Organ with organ cavity which is continuous proximally with the rectum and distally terminates with the anus. Examples: There is only one anal canal.
Tomasz Adamusiak
Fundus of stomach[accessedResource: FMAID:14559][accessDate: 10-05-2010]
gastric fundus
Fundus gastricus (ventricularis)[accessedResource: FMAID:14559][accessDate: 10-05-2010]
Fundus gastricus (ventricularis)
FMAID:14559
Fundus of stomach
Jie Zheng
CHEBI:38877
i.v.-Anaesthetika
intravenous anaesthetic
intravenous anesthetics
http://www.ebi.ac.uk/efo/EFO_0001872
James Malone
i.v.-Anaesthetikum
corpus callosum
NCIt:C12446
BTO:0000615
The great band of commissural fibers uniting the cerebral hemispheres of higher mammals including humans.[accessedResource: BTO:0000615][accessDate: 10-05-2010]
James Malone
A white matter structure within the cleft that separates the left and right cerebral hemispheres in the mammalian brain. It is composed of a wide, flat bundle of 200-250 million axonal projections.
A white matter structure within the cleft that separates the left and right cerebral hemispheres in the mammalian brain. It is composed of a wide, flat bundle of 200-250 million axonal projections.[accessedResource: NCIt:C12446][accessDate: 10-05-2010]
The great band of commissural fibers uniting the cerebral hemispheres of higher mammals including humans.
BFTC905
James Malone
Ele Holloway
"roof rat"
"house rat"
"black rat"
http://www.ebi.ac.uk/efo/EFO_0002654
Rattus rattus
James Malone
Adenocarcinoma of the Prostate[accessedResource: NCIt:C2919][accessDate: 10-05-2010]
GeneRIF:15994952
prostate cancer
GeneRIF:12115574
GeneRIF:12664577
GeneRIF:15131044
GeneRIF:15073126
Adenocarcinoma of prostate[accessedResource: SNOMEDCT:399490008][accessDate: 10-05-2010]
James Malone
GeneRIF:14612932
GeneRIF:15041704
GeneRIF:16324197
adenocarcinoma of prostate (disorder)
GeneRIF:15256061
GeneRIF:12865322
GeneRIF:12433721
GeneRIF:15381379
GeneRIF:11550208
GeneRIF:11813207
SNOMEDCT:399490008
GeneRIF:11023533
Adenocarcinoma of Prostate
GeneRIF:15146458
GeneRIF:11790779
Adenocarcinoma of the Prostate
prostate adenocarcinoma
GeneRIF:15665279
GeneRIF:14559809
GeneRIF:15138198
adenocarcinoma of prostate (disorder)[accessedResource: DOID:2526][accessDate: 10-05-2010]
An adenocarcinoma arising from the prostate gland. It is one of the most common malignant tumors afflicting men. The majority of adenocarcinomas arise in the peripheral zone and a minority occurs in the central or the transitional zone of the prostate gland. Grading of prostatic adenocarcinoma predicts disease progression and correlates with survival. Several grading systems have been proposed, of which the Gleason system is the most commonly used. Gleason sums of 2 to 4 represent well-differentiated disease, 5 to 7 moderately differentiated disease and 8 to 10 poorly differentiated disease. Prostatic-specific antigen (PSA) serum test is widely used as a screening test for the early detection of prostatic adenocarcinoma. Treatment options include radical prostatectomy, radiation therapy, androgen ablation and cryotherapy. Watchful waiting or surveillance alone is an option for older patients with low-grade or low-stage disease.
GeneRIF:15609334
NCIt:C2919
An adenocarcinoma arising from the prostate gland. It is one of the most common malignant tumors afflicting men. The majority of adenocarcinomas arise in the peripheral zone and a minority occurs in the central or the transitional zone of the prostate gland. Grading of prostatic adenocarcinoma predicts disease progression and correlates with survival. Several grading systems have been proposed, of which the Gleason system is the most commonly used. Gleason sums of 2 to 4 represent well-differentiated disease, 5 to 7 moderately differentiated disease and 8 to 10 poorly differentiated disease. Prostatic-specific antigen (PSA) serum test is widely used as a screening test for the early detection of prostatic adenocarcinoma. Treatment options include radical prostatectomy, radiation therapy, androgen ablation and cryotherapy. Watchful waiting or surveillance alone is an option for older patients with low-grade or low-stage disease.[accessedResource: NCIt:C2919][accessDate: 10-05-2010]
DOID:2526
CHEBI:9168
http://www.ebi.ac.uk/efo/EFO_0001602
A macrolide that has formula C51H79NO13.
InChIKey=QFJCIRLUMZQUOT-KLHQEZAJBI
Sirolimus
(1R,9S,12S,15R,16E,18R,19R,21R,23S,24E,26E,28E,30S,32S,35R)-1,18-dihydroxy-12-{(2S)-1-[(1S,3R,4R)-4-hydroxy-3-methoxycyclohexyl]propan-2-yl}-19,30-dimethoxy-15,17,21,23,29,35-hexamethyl-11,36-dioxa-4-azatricyclo[30.3.1.0(4,9)]hexatriaconta-16,24,26,28-tetraene-2,3,10,14,20-pentone
InChI=1/C51H79NO13/c1-30-16-12-11-13-17-31(2)42(61-8)28-38-21-19-36(7)51(60,65-38)48(57)49(58)52-23-15-14-18-39(52)50(59)64-43(33(4)26-37-20-22-40(53)44(27-37)62-9)29-41(54)32(3)25-35(6)46(56)47(63-10)45(55)34(5)24-30/h11-13,16-17,25,30,32-34,36-40,42-44,46-47,53,56,60H,14-15,18-24,26-29H2,1-10H3/b13-11+,16-12+,31-17+,35-25+/t30-,32-,33+,34-,36-,37+,38+,39+,40-,42+,43+,44-,46-,47+,51-/m1/s1
James Malone
[H][C@]1(CC[C@@H](O)[C@@H](C1)OC)C[C@H](C)[C@]1([H])CC(=O)[C@H](C)\\C=C(C)\\[C@@H](O)[C@@H](OC)C(=O)[C@H](C)C[C@H](C)\\C=C\\C=C\\C=C(C)\\[C@H](C[C@]2([H])CC[C@@H](C)[C@@](O)(O2)C(=O)C(=O)N2CCCC[C@@]2([H])C(=O)O1)OC
C51H79NO13
rapamycin
Rapamune
Antibiotic AY 22989
SJSA1
James Malone
Ele Holloway
GLI56
James Malone
anaplastic oligoastrocytoma
Ele Holloway
anaplastic oligoastrocytoma (morphologic abnormality)
James Malone
WHO grade III mixed glioma[accessedResource: DOID:7306][accessDate: 10-05-2010]
WHO grade III mixed glioma
anaplastic oligoastrocytoma (morphologic abnormality)[accessedResource: DOID:7306][accessDate: 10-05-2010]
DOID:7306
NCIH1355
James Malone
Ele Holloway
http://www.genedb.org/genedb/Search?organism=cerevisiae&name=YPL262W&isid=true
FUM1 is a yeast strain as described in http://www.genedb.org/genedb/Search?organism=cerevisiae&name=YPL262W&isid=true
FUM1
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158625&type=germplasm
CS57601 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158625&type=germplasm
CS57601
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158619&type=germplasm
CS57595 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158619&type=germplasm
CS57595
James Malone
Met5A
James Malone
Blood plasma is a yellow liquid component of blood, in which the blood cells in whole blood would normally be suspended.
BTO:0000131
plasma
plasma[accessedResource: BTO:0000131][accessDate: 10-05-2010]
blood plasma
The fluid portion of the blood in which the particulate components are suspended.[accessedResource: BTO:0000131][accessDate: 10-05-2010]
James Malone
The fluid portion of the blood in which the particulate components are suspended.
BTO:0000131
ventral cord
subesophageal + T1 + T2 + T3 + A1 + A2 + A3 + A4 + A5 + A6 + A7 + A8 ganglia
larval ventral ganglion
subesophageal + T1 + T2 + T3 + A1 + A2 + A3 + A4 + A5 + A6 + A7 + A8 ganglia[accessedResource: FBbt:00001102][accessDate: 10-05-2010]
.[accessedResource: FBbt:00001102][accessDate: 10-05-2010]
James Malone
FBbt:00001102
MAT:0000339
BTO:0002328
ventral nerve cord
ventral cord[accessedResource: FBbt:00001102][accessDate: 10-05-2010]
larval ventral ganglion[accessedResource: FBbt:00001102][accessDate: 10-05-2010]
.
The pair of closely united ventral longitudinal nerves with their segmental ganglia that is characteristic of many elongate invertebrates (as earthworms).[accessedResource: BTO:0002328][accessDate: 10-05-2010]
The pair of closely united ventral longitudinal nerves with their segmental ganglia that is characteristic of many elongate invertebrates (as earthworms).
H720
James Malone
GM11831
James Malone
cinc
James Malone
http://www.ebi.ac.uk/efo/EFO_0001638
zinc atom
Zn
zincum
InChI=1/Zn
CHEBI:27363
A zinc group element that has formula Zn.
30Zn
A zinc group element atom that has formula Zn.
Zink
Zinc
InChIKey=HCHKCACWOHOZIP-UHFFFAOYAS
NCIt:C32205
bladder mucosa
James Malone
ZFS:0000013
blastula oblong
James Malone
CL:0000670
primordial germ cell
James Malone
CL:0000112
intermediolateral column motoneuron
columnar neuron
James Malone
SUM149PT
James Malone
BeWo
James Malone
Ele Holloway
troglitazone
Rezulin (TN)
Cc1c(C)c2OC(C)(CCc2c(C)c1O)COc1ccc(CC2SC(=O)NC2=O)cc1
5-{4-[(6-hydroxy-2,5,7,8-tetramethyl-3,4-dihydro-2H-chromen-2-yl)methoxy]benzyl}-1,3-thiazolidine-2,4-dione
A chromane that has formula C24H27NO5S.
C24H27NO5S
Romglizone
5-(4-(6-Hydroxy-2,5,7,8-tetramethylchroman-2-ylmethoxy)benzyl)thiazolidine-2,4-dione
troglitazona
(+-)-all-rac-5-(p-((6-Hydroxy-2,5,7,8-tetramethyl-2-chromanyl)methoxy)benzyl)-2,4-thiazolidinedione
troglitazonum
InChI=1/C24H27NO5S/c1-13-14(2)21-18(15(3)20(13)26)9-10-24(4,30-21)12-29-17-7-5-16(6-8-17)11-19-22(27)25-23(28)31-19/h5-8,19,26H,9-12H2,1-4H3,(H,25,27,28)/f/h25H
http://www.ebi.ac.uk/efo/EFO_0001632
InChIKey=GXPHKUHSUJUWKP-LNNLXFCOCP
James Malone
CHEBI:9753
FMA:242003
orbitofrontal cortex
James Malone
1.5
true
obsolete_promyelocytic leukemia
James Malone
Duplication with acute promyelocytic leukemia (EFO_0000224)
A mating type is a biomaterial factor which describes the type of sexual reproduction through isogamy occur in eukaryotes that undergo.
mating type
James Malone
true
UO:0000149
http://www.ebi.ac.uk/efo/EFO_0001727
A dervied time unit is a derived unit which is a standard measure of the dimension in which events occur in sequence.
A derived unit which is a standard measure of the dimension in which events occur in sequence.
derived time unit
James Malone
Acute Myelomonocytic Leukemia (FAB Type M4)
An acute leukemia characterized by the proliferation of both neutrophil and monocyte precursors. Patients typically present with anemia, thrombocytopenia, fever and fatigue. This type of leukemia frequently responds to aggressive therapy. (WHO, 2001) -- 2003[accessedResource: NCIt:C7463][accessDate: 10-05-2010]
acute myelomonocytic leukemia
An acute leukemia characterized by the proliferation of both neutrophil and monocyte precursors. Patients typically present with anemia, thrombocytopenia, fever and fatigue. This type of leukemia frequently responds to aggressive therapy. (WHO, 2001) -- 2003
Acute M4 Myeloid Leukemia[accessedResource: NCIt:C7463][accessDate: 10-05-2010]
James Malone
NCIt:C7463
AMML[accessedResource: NCIt:C7463][accessDate: 10-05-2010]
AMML
Acute M4 Myeloid Leukemia
Acute Myelomonocytic Leukemia (FAB Type M4)[accessedResource: NCIt:C7463][accessDate: 10-05-2010]
MO_355
innate behavior design
Tomasz Adamusiak
true
milliliter
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001712
ml
A milliliter is a volume unit which is equal to one thousandth of a liter or 10^-3 L, or to 1 cubic centimeter.
Tomasz Adamusiak
MO_488
James Malone
A volume unit which is equal to one thousandth of a liter or 10^[-3] L, or to 1 cubic centimeter.
NCIH1993
James Malone
Ele Holloway
An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.
motor neuron
motoneuron[accessedResource: CL:0000100][accessDate: 10-05-2010]
An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.[accessedResource: CL:0000100][accessDate: 10-05-2010]
CL:0000100
Neurons which activate muscle cells (MSH).
NIFSTD:sao1460710779
Neurons which activate muscle cells (MSH).[accessedResource: NIFSTD:sao1460710779][accessDate: 10-05-2010]
Tomasz Adamusiak
motoneuron
FBbt:00005625
embryonic cuprophilic cell
James Malone
CO[C@@H](\\C=C\\c1csc(n1)-c1csc(n1)C(C)\\C=C\\C=C\\C(C)C)[C@@H](C)C(\\OC)=C/C(N)=O
http://www.ebi.ac.uk/efo/EFO_0002672
(2E,4R,5S,6E)-3,5-dimethoxy-4-methyl-7-{2'-[(2S,3E,5E)-7-methylocta-3,5-dien-2-yl]-2,4'-bi-1,3-thiazol-4-yl}hepta-2,6-dienamide
InChI=1/C25H33N3O3S2/c1-16(2)9-7-8-10-17(3)24-28-20(15-33-24)25-27-19(14-32-25)11-12-21(30-5)18(4)22(31-6)13-23(26)29/h7-18,21H,1-6H3,(H2,26,29)/b9-7+,10-8+,12-11+,22-13+/t17?,18-,21+/m1/s1/f/h26H2
C25H33N3O3S2
A 2,4'-bi-1,3-thiazole substituted at the 4-position with a (1E,3S,4R,5E)-7-amino-3,5-dimethoxy-4-methyl-7-oxohepta-1,5-dien-1-yl] group and at the 2'-position with a (2S,3E,5E)-7-methylocta-3,5-dien-2-yl group. It is an inhibitor of coenzyme Q - cytochrome c reductase.
InChIKey=XKTFQMCPGMTBMD-WAZGDBOIDY
CHEBI:25461
myxothiazol
1,1,1,3,3,3-Hexafluoro-2-(fluoromethoxy)propane
Sevoflurano
Tomasz Adamusiak
Sevofluranum
C4H3F7O
CHEBI:9130
InChI=1/C4H3F7O/c5-1-12-2(3(6,7)8)4(9,10)11/h2H,1H2
FCOC(C(F)(F)F)C(F)(F)F
sevoflurane
InChIKey=DFEYYRMXOJXZRJ-UHFFFAOYAO
Sevofluran
http://www.ebi.ac.uk/efo/EFO_0002733
An ether compound having fluoromethyl and 1,1,1,3,3,3-hexafluoroisopropyl as the two alkyl groups.
Ele Holloway
MO_798
A treatment process in which a chemical compound is administered to the subject under investigation.
compound based treatment
Tomasz Adamusiak
Jie Zheng
James Malone
http://jaxmice.jax.org/strain/000691.html
NIFSTD:birnlex_557
129X1
129X1/SvJ is a substrain of the mouse strain 129 as described in Jackson Laboratory http://jaxmice.jax.org/strain/000691.html Note this strain was formerly called 129X1
129X1/SvJ
Tomasz Adamusiak
James Malone
The smooth muscle lining the uterus.[accessedResource: NCIt:C12314][accessDate: 10-05-2010]
The smooth muscle coat of the uterus, which forms the main mass of the organ.[accessedResource: BTO:0000907][accessDate: 10-05-2010]
NCIt:C12314
The smooth muscle lining the uterus.
BTO:0000907
James Malone
The smooth muscle coat of the uterus, which forms the main mass of the organ.
myometrium
Folic acid deficiency (disorder)
Folic Acid deficiency[accessedResource: DOID:8453][accessDate: 10-05-2010]
FOLIC ACID DEFIC[accessedResource: MSH:D005494][accessDate: 10-05-2010]
FOLIC ACID DEFIC
Deficiency of folic acid[accessedResource: SNOMEDCT:190633005][accessDate: 10-05-2010]
GeneRIF:12666851
GeneRIF:15817609
deficiency of folic acid (disorder)
Folic Acid Deficiency
James Malone
GeneRIF:12144527
SNOMEDCT:190633005
Deficiency of folic acid
deficiency of folic acid (disorder)[accessedResource: DOID:8453][accessDate: 10-05-2010]
MSH:D005494
DOID:8453
A nutritional condition produced by a deficiency of FOLIC ACID in the diet. Many plant and animal tissues contain folic acid, abundant in green leafy vegetables, yeast, liver, and mushrooms but destroyed by long-term cooking. Alcohol interferes with its intermediate metabolism and absorption. Folic acid deficiency may develop in long-term anticonvulsant therapy or with use of oral contraceptives. This deficiency causes anemia, macrocytic anemia, and megaloblastic anemia. It is indistinguishable from vitamin B 12 deficiency in peripheral blood and bone marrow findings, but the neurologic lesions seen in B 12 deficiency do not occur. (Merck Manual, 16th ed)[accessedResource: MSH:D005494][accessDate: 10-05-2010]
Deficiencies, Folic Acid
GeneRIF:16046705
A nutritional condition produced by a deficiency of FOLIC ACID in the diet. Many plant and animal tissues contain folic acid, abundant in green leafy vegetables, yeast, liver, and mushrooms but destroyed by long-term cooking. Alcohol interferes with its intermediate metabolism and absorption. Folic acid deficiency may develop in long-term anticonvulsant therapy or with use of oral contraceptives. This deficiency causes anemia, macrocytic anemia, and megaloblastic anemia. It is indistinguishable from vitamin B 12 deficiency in peripheral blood and bone marrow findings, but the neurologic lesions seen in B 12 deficiency do not occur. (Merck Manual, 16th ed)
Folic Acid Deficiencies[accessedResource: MSH:D005494][accessDate: 10-05-2010]
Folic acid deficiency (disorder)[accessedResource: DOID:8453][accessDate: 10-05-2010]
GeneRIF:15068241
GeneRIF:12887734
folate deficiency
A length unit which is equal to one thousandth of one millionth of a meter or 10^[-9] m.
UO:0000018
nm
A nanometer is a length unit which is equal to 1m x 10^-9.
true
James Malone
nanometer
http://www.ebi.ac.uk/efo/EFO_0001723
nanometre
NCIt:C34184
Gonadal Ridge
embryonic gonadal ridge
James Malone
NCI Metathesaurus: C0037658
somatosensory cortex
James Malone
HCC70
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158809&type=germplasm
CS57785 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158809&type=germplasm
CS57785
James Malone
Mixed Lobular and Ductal Carcinoma of Breast[accessedResource: NCIt:C5160][accessDate: 10-05-2010]
[M]Infiltrating duct and lobular carcinoma
ductal breast carcinoma In situ and Invasive Lobular carcinoma[accessedResource: DOID:6582][accessDate: 10-05-2010]
DCIS and Infiltrating Lobular Carcinoma
NCIt:C7689
Mixed Ductal and Lobular Carcinoma of Breast
mixed Lobular and ductal carcinoma
[M] Infiltrating duct and lobular carcinoma[accessedResource: SNOMEDCT:35232005][accessDate: 10-05-2010]
Invasive Ductal and Lobular Carcinoma In Situ
Infiltrating Ductal and Lobular Carcinoma in situ
Ductal Carcinoma in situ and Infiltrating Lobular Carcinoma
Infiltrating duct and lobular carcinoma
Lobular Carcinoma in situ and Invasive Ductal Carcinoma[accessedResource: NCIt:C7689][accessDate: 10-05-2010]
Mixed Ductal and Lobular Breast Carcinoma[accessedResource: NCIt:C5160][accessDate: 10-05-2010]
DCIS and Infiltrating Lobular Carcinoma[accessedResource: NCIt:C6939][accessDate: 10-05-2010]
James Malone
Mixed Ductal and Lobular Breast Carcinoma
Ductal Carcinoma in situ and Infiltrating Lobular Carcinoma[accessedResource: NCIt:C6939][accessDate: 10-05-2010]
NCIt:C6939
Lobular Carcinoma in situ and Invasive Ductal Carcinoma
Duplicate with invasive ductal and lobular carcinoma (EFO_0000552)
LCIS and Infiltrating Ductal Carcinoma[accessedResource: NCIt:C7689][accessDate: 10-05-2010]
Non-Infiltrating Ductal Carcinoma and Infiltrating Lobular Carcinoma
Infiltrating duct and lobular carcinoma in situ
Intraductal and lobular carcinoma
ductal breast carcinoma In situ and Invasive Lobular carcinoma
Lobular and ductal carcinoma[accessedResource: SNOMEDCT:35232005][accessDate: 10-05-2010]
Intraductal and lobular carcinoma[accessedResource: SNOMEDCT:35232005][accessDate: 10-05-2010]
Mixed Ductal and Lobular Carcinoma of the Breast[accessedResource: NCIt:C5160][accessDate: 10-05-2010]
obsolete_mixed lobular and ductal breast carcinoma
DCIS and ILC
Non-Infiltrating Ductal Carcinoma and ILC[accessedResource: NCIt:C6939][accessDate: 10-05-2010]
true
Mixed Ductal and Lobular Carcinoma of the Breast
SNOMEDCT:35232005
NCIt:C7690
DOID:6582
Infiltrating duct and lobular carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:35232005][accessDate: 10-05-2010]
Non-Infiltrating Ductal Carcinoma and Infiltrating Lobular Carcinoma[accessedResource: NCIt:C6939][accessDate: 10-05-2010]
LCIS and Infiltrating Ductal Carcinoma
Infiltrating duct and lobular carcinoma (morphologic abnormality)
Infiltrating Ductal and Lobular Carcinoma in situ[accessedResource: NCIt:C7689][accessDate: 10-05-2010]
1.5
Mixed Lobular and Ductal Carcinoma[accessedResource: NCIt:C5160][accessDate: 10-05-2010]
Infiltrating duct and lobular carcinoma[accessedResource: DOID:6582][accessDate: 10-05-2010]
NCIt:C5160
Infiltrating duct and lobular carcinoma in situ[accessedResource: SNOMEDCT:35232005][accessDate: 10-05-2010]
Ductal and Lobular Carcinoma
Invasive Ductal and Lobular Carcinoma In Situ[accessedResource: NCIt:C7689][accessDate: 10-05-2010]
DCIS and ILC[accessedResource: NCIt:C6939][accessDate: 10-05-2010]
Non-Infiltrating Ductal Carcinoma and ILC
James Malone
T47D
NCIH524
James Malone
Ele Holloway
The supportive and conductive tissue in plants, consisting of xylem and phloem.
BTO:0001432
vascular tissue
James Malone
MAT:0000362
The supportive and conductive tissue in plants, consisting of xylem and phloem.[accessedResource: BTO:0001432][accessDate: 10-05-2010]
PO:0009015
http://jaxmice.jax.org/strain/009321.html
ILSXISS98/TejJ
Tomasz Adamusiak
RERF-LC-AI
James Malone
Ele Holloway
ILSXISS117/TejJ
Tomasz Adamusiak
PC-1
James Malone
Ele Holloway
Natural Language Generator 8th April 2010
A 22rv1 is a cell line.
A 22rv1 is all of the following: something that is bearer of a prostate carcinoma, something that derives from a homo sapiens, and something that derives from a prostate.
Ele Holloway
James Malone
22Rv1
http://www.arabidopsis.org/servlets/TairObject?id=1005158831&type=germplasm
CS57807 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158831&type=germplasm
CS57807
James Malone
SAEC is a cell line derived from Small Airway Epithelial Cells
SAEC
FBbt:00005516
adult muscle precursor specific anlage
adult muscle precursor specific anlage[accessedResource: FBbt:00005516][accessDate: 10-05-2010]
adult muscle precursor primordium
James Malone
MO_510
http://www.ebi.ac.uk/efo/EFO_0002088
A computer is an instrument which manipulates (stores, retrieves, and processes) data according to a list of instructions.
computer
James Malone
FBbt:00005616
embryonic foregut sensory structure
James Malone
Second segment of right coronary artery[accessedResource: FMAID:3832][accessDate: 10-05-2010]
FMAID:3832
Tomasz Adamusiak
Second segment of right coronary artery
Posterior segment of right coronary artery[accessedResource: FMAID:3832][accessDate: 10-05-2010]
Posterior segment of right coronary artery
distal portion of right coronary artery
Jie Zheng
promegakaryocyte
The earliest cytologically identifiable precursor in the thrombocytic series.
megacaryoblast
megakaryocyte progenitor cell
James Malone
megakaryoblast[accessedResource: CL:0000553][accessDate: 10-05-2010]
megakaryoblast
megacaryocyte progenitor cell[accessedResource: CL:0000553][accessDate: 10-05-2010]
promegacaryocyte
promegakaryocyte[accessedResource: CL:0000553][accessDate: 10-05-2010]
megacaryocyte progenitor cell
megacaryoblast[accessedResource: CL:0000553][accessDate: 10-05-2010]
promegacaryocyte[accessedResource: CL:0000553][accessDate: 10-05-2010]
CL:0000553
The earliest cytologically identifiable precursor in the thrombocytic series.[accessedResource: CL:0000553][accessDate: 10-05-2010]
GeneRIF:15286433
GeneRIF:15539010
GeneRIF:12446618
GeneRIF:15232685
GeneRIF:15496156
GeneRIF:14610338
GeneRIF:14736962
GeneRIF:12757981
GeneRIF:14531794
GeneRIF:15830182
GeneRIF:16164635
GeneRIF:15502921
Diabetes-nephrosis syndrome[accessedResource: SNOMEDCT:54181000][accessDate: 10-05-2010]
GeneRIF:14514642
GeneRIF:12874455
Nephrotic syndrome in diabetes mellitus[accessedResource: SNOMEDCT:197605007][accessDate: 10-05-2010]
GeneRIF:15600254
GeneRIF:14521940
Diabetes mellitus type II [non-insulin dependent type] [NIDDM type] [adult-onset type] or unspecified type, not stated as uncontrolled, with renal manifestations
GeneRIF:15016802
GeneRIF:15793258
GeneRIF:12722028
GeneRIF:15327405
GeneRIF:15983325
GeneRIF:15745834
Nephrotic syndrome in diabetes mellitus (disorder)
GeneRIF:12938144
Diabetic renal disease
DMII RENAL UNCNTRLD[accessedResource: ICD9:250.42][accessDate: 10-05-2010]
GeneRIF:14586741
GeneRIF:16249462
James Malone
GeneRIF:15957132
Renal disorder associated with diabetes mellitus
GeneRIF:14694018
Nephrotic syndrome in diabetes mellitus (disorder)[accessedResource: SNOMEDCT:197605007][accessDate: 10-05-2010]
SNOMEDCT:197605007
ICD9:250.4
ICD9:250.40
GeneRIF:15153757
Nephrotic syndrome in diabetes mellitus
GeneRIF:14633865
SNOMEDCT:21858001
DOID:2370
GeneRIF:15942051
Diabetes-nephrosis syndrome
GeneRIF:12675860
GeneRIF:12171997
GeneRIF:12941731
GeneRIF:12500218
GeneRIF:15052533
GeneRIF:15322501
Diabetes mellitus type II [non-insulin dependent type] [NIDDM type] [adult-onset type] or unspecified type, uncontrolled, with renal manifestations[accessedResource: ICD9:250.42][accessDate: 10-05-2010]
Diabetic renal disease (disorder)
Diabetes with renal manifestations[accessedResource: SNOMEDCT:21858001][accessDate: 10-05-2010]
Diabetic renal disease[accessedResource: SNOMEDCT:127013003][accessDate: 10-05-2010]
GeneRIF:11845237
Diabetes mellitus type II [non-insulin dependent type] [NIDDM type] [adult-onset type] or unspecified type, uncontrolled, with renal manifestations
GeneRIF:12187087
GeneRIF:14747236
GeneRIF:15983323
GeneRIF:12086959
GeneRIF:12606536
GeneRIF:15915338
Kimmelstiel - Wilson disease
GeneRIF:14514644
GeneRIF:11770799
GeneRIF:15126006
GeneRIF:15888973
Kimmelstiel - Wilson disease[accessedResource: SNOMEDCT:197605007][accessDate: 10-05-2010]
GeneRIF:14694017
GeneRIF:15983219
GeneRIF:15946912
DMII RENL NT ST UNCNTRLD[accessedResource: ICD9:250.40][accessDate: 10-05-2010]
GeneRIF:12200076
GeneRIF:12610055
GeneRIF:15790669
GeneRIF:12505748
GeneRIF:12784186
DMII RENL NT ST UNCNTRLD
GeneRIF:12540629
GeneRIF:12413777
GeneRIF:15120704
GeneRIF:11940319
GeneRIF:15047636
GeneRIF:15345671
GeneRIF:14748439
GeneRIF:14578305
GeneRIF:12032186
GeneRIF:16211375
GeneRIF:15562008
Diabetes with renal manifestations
GeneRIF:14747204
SNOMEDCT:127013003
GeneRIF:14583183
GeneRIF:16301823
GeneRIF:12147786
GeneRIF:12147787
GeneRIF:12911551
GeneRIF:15308130
Diabetes with renal manifestations (disorder)[accessedResource: SNOMEDCT:21858001][accessDate: 10-05-2010]
ICD9:250.42
GeneRIF:15223229
SNOMEDCT:54181000
GeneRIF:15616804
GeneRIF:12436341
GeneRIF:16091581
GeneRIF:16164625
GeneRIF:12882872
GeneRIF:12631336
GeneRIF:15489960
GeneRIF:16249547
diabetic nephropathy
GeneRIF:14674716
DMII RENAL UNCNTRLD
GeneRIF:14633859
GeneRIF:12897091
Diabetes-nephrosis syndrome (disorder)[accessedResource: SNOMEDCT:54181000][accessDate: 10-05-2010]
Diabetes mellitus type II [non-insulin dependent type] [NIDDM type] [adult-onset type] or unspecified type, not stated as uncontrolled, with renal manifestations[accessedResource: ICD9:250.40][accessDate: 10-05-2010]
GeneRIF:16014032
GeneRIF:12105259
GeneRIF:15616035
GeneRIF:12630823
Diabetes with renal manifestations (disorder)
Diabetes-nephrosis syndrome (disorder)
GeneRIF:15610240
GeneRIF:15780082
Diabetic renal disease (disorder)[accessedResource: SNOMEDCT:127013003][accessDate: 10-05-2010]
GeneRIF:12644472
Renal disorder associated with diabetes mellitus[accessedResource: SNOMEDCT:127013003][accessDate: 10-05-2010]
true
1.5
Classical Hodgkin Lymphoma
cHL
A monoclonal B-cell lymphoproliferation in the vast majority of cases. It is characterized by a bimodal age distribution (15-30 years of life and late life) and is often associated with EBV infection. In less than 5% of cases it is a monoclonal proliferation of T-lymphocytes. Morphologically, it is characterized by the presence of Reed-Sternberg cells and mononuclear Hodgkin cells. The Reed-Sternberg and mononuclear Hodgkin cells are CD30 positive in nearly all cases and CD15 positive in the majority of cases.[accessedResource: C7164][accessDate: 10-05-2010]
Classical Hodgkin Lymphoma[accessedResource: C7164][accessDate: 10-05-2010]
obsolete_classical Hodgkin's lymphoma
CHL[accessedResource: C7164][accessDate: 10-05-2010]
Duplicate with Hodgkin's lymphoma (EFO_0000183)
A monoclonal B-cell lymphoproliferation in the vast majority of cases. It is characterized by a bimodal age distribution (15-30 years of life and late life) and is often associated with EBV infection. In less than 5% of cases it is a monoclonal proliferation of T-lymphocytes. Morphologically, it is characterized by the presence of Reed-Sternberg cells and mononuclear Hodgkin cells. The Reed-Sternberg and mononuclear Hodgkin cells are CD30 positive in nearly all cases and CD15 positive in the majority of cases.
Classical Hodgkin's Lymphoma
James Malone
C7164
Classical Hodgkin's Lymphoma[accessedResource: C7164][accessDate: 10-05-2010]
FBbt:00005646
adult hindgut precursor
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158668&type=germplasm
CS57644 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158668&type=germplasm
CS57644
James Malone
estrogen receptor antagonists
http://www.ebi.ac.uk/efo/EFO_0001897
CHEBI:50792
An antagonist at the estrogen receptor.
estrogen receptor antagonist
James Malone
James Malone
HCC1143
C8H12N4O4
InChI=1/C8H12N4O4/c9-7-10-3-12(8(15)11-7)6-1-4(14)5(2-13)16-6/h3-6,13-14H,1-2H2,(H2,9,11,15)/t4-,5+,6+/m0/s1/f/h9H2
http://www.ebi.ac.uk/efo/EFO_0001473
4-amino-1-(2-deoxy-beta-D-erythro-pentofuranosyl)-1,3,5-triazin-2(1H)-one
CHEBI:50131
decitabine
A 2'-deoxyribonucleoside that has formula C8H12N4O4.
4-amino-1-(2-deoxy-beta-D-erythro-pentofuranosyl)-s-triazin-2(1H)-one
5-aza-2'-deoxycytidine
InChIKey=XAUDJQYHKZQPEU-BRLQTKNBDS
5-azadeoxycytidine
Nc1ncn([C@H]2C[C@H](O)[C@@H](CO)O2)c(=O)n1
ENCODE functional genome mapping
Lymphatic vessel
A vessel that contains or conveys lymph, that originates as an interfibrillar or intercellular cleft or space in a tissue or organ, and that if small has no distinct walls or walls composed only of endothelial cells and if large resembles a vein in structure.
lymph vessel
Segment of lymphatic tree organ, the wall and lumen of which are continuous with those of the veins, directly or indirectly; together with other lymphatic vessels and lymph nodes, it constitutes the lymphatic tree organ. Examples: bronchomediastinal lymph duct, thoracic duct.[accessedResource: FMAID:30315][accessDate: 10-05-2010]
TAO:0005105
MAT:0000443
BTO:0000752
A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep.
MA:0000138
A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep.[accessedResource: TAO:0005105][accessDate: 10-05-2010]
Segment of lymphatic tree organ, the wall and lumen of which are continuous with those of the veins, directly or indirectly; together with other lymphatic vessels and lymph nodes, it constitutes the lymphatic tree organ. Examples: bronchomediastinal lymph duct, thoracic duct.
James Malone
XAO:0000375
A vessel that contains or conveys lymph, that originates as an interfibrillar or intercellular cleft or space in a tissue or organ, and that if small has no distinct walls or walls composed only of endothelial cells and if large resembles a vein in structure.[accessedResource: BTO:0000752][accessDate: 10-05-2010]
lymphatic vessel[accessedResource: MAT:0000443][accessDate: 10-05-2010]
FMAID:30315
Airflow Obstructions, Chronic
Chronic irreversible airway obstruction[accessedResource: SNOMEDCT:13645005][accessDate: 10-05-2010]
GeneRIF:16081882
SNOMEDCT:413846005
GeneRIF:14676438
CHRONIC OBSTRUCTIVE AIRWAY DIS[accessedResource: MSH:D029424][accessDate: 10-05-2010]
CHRONIC OBSTRUCTIVE AIRWAY DIS
chronic airway obstruction, not elsewhere classified[accessedResource: DOID:3083][accessDate: 10-05-2010]
GeneRIF:15718407
GeneRIF:15702235
Chronic airway obstruction
PULM DIS CHRONIC OBSTRUCTIVE
GeneRIF:12921631
GeneRIF:12137602
Dops[accessedResource: DOID:3083][accessDate: 10-05-2010]
GeneRIF:10413721
COPD, CHRONIC OBSTRUCTIVE PULMONARY DISEASE[accessedResource: NCIt:C3199][accessDate: 10-05-2010]
GeneRIF:15596681
COLD - Chronic obstructive lung disease[accessedResource: SNOMEDCT:13645005][accessDate: 10-05-2010]
chronic obstructive lung disease
GeneRIF:11829455
Dops
CAFL - Chronic airflow limitation
CAL - Chronic airflow limitation[accessedResource: SNOMEDCT:13645005][accessDate: 10-05-2010]
Chronic obstructive airways disease NOS
SNOMEDCT:13645005
GeneRIF:12816735
DISEASE (COPD), CHRONIC OBSTRUCTIVE
A disease of chronic diffuse irreversible airflow obstruction. Subcategories of COPD include CHRONIC BRONCHITIS and PULMONARY EMPHYSEMA.[accessedResource: MSH:D029424][accessDate: 10-05-2010]
Chronic airway disease[accessedResource: SNOMEDCT:13645005][accessDate: 10-05-2010]
COPD[accessedResource: NCIt:C3199][accessDate: 10-05-2010]
Chronic obstructive pulmonary disease NOS
GeneRIF:12853070
Chronic irreversible airway obstruction
Chronic airflow limitation[accessedResource: SNOMEDCT:13645005][accessDate: 10-05-2010]
NCIt:C3199
Chronic obstructive lung disease, NOS[accessedResource: SNOMEDCT:13645005][accessDate: 10-05-2010]
GeneRIF:15795697
GeneRIF:12884528
COAD - Chronic obstructive airways disease
COLD - Chronic obstructive lung disease
Chronic airway disease
Chronic Obstructive Airways Disease
James Malone
chronic obstructive pulmonary disease
COPD
CAO - Chronic airflow obstruction
GeneRIF:14718422
A disease of chronic diffuse irreversible airflow obstruction. Subcategories of COPD include CHRONIC BRONCHITIS and PULMONARY EMPHYSEMA.
Chronic obstructive pulmonary disease NOS[accessedResource: SNOMEDCT:196003006][accessDate: 10-05-2010]
CHRONIC OBSTRUCTIVE LUNG DIS[accessedResource: MSH:D029424][accessDate: 10-05-2010]
Chronic obstructive pulmonary disease finding (finding)[accessedResource: SNOMEDCT:413846005][accessDate: 10-05-2010]
MSH:D029424
chronic obstructive pulmonary disease and allied conditions
chronic obstructive lung disease [Ambiguous]
GeneRIF:12838617
A group of disorders affecting the bronchi and the lung parenchyma. It is characterized by chronic and irreversible obstruction of the airflow. It includes chronic bronchitis and pulmonary emphysema.
Chronic obstructive lung disease, NEC[accessedResource: SNOMEDCT:13645005][accessDate: 10-05-2010]
COAD
COPD NOS[accessedResource: DOID:3083][accessDate: 10-05-2010]
GeneRIF:15039137
GeneRIF:11953106
chronic airway obstruction, NEC in ICD9CM_2006
Chronic Obstructive Airways Disease[accessedResource: NCIt:C3199][accessDate: 10-05-2010]
Chronic obstructive lung disease, NOS
PULMONARY DISEASE (COPD), CHRONIC OBSTRUCTIVE
GeneRIF:12016104
GeneRIF:15843147
GeneRIF:15994391
Chronic obstructive airways disease NOS[accessedResource: SNOMEDCT:196003006][accessDate: 10-05-2010]
CHRONIC OBSTRUCTIVE PULM DIS[accessedResource: MSH:D029424][accessDate: 10-05-2010]
GeneRIF:11667971
GeneRIF:15038404
chronic obstructive pulmonary disease finding
CAL - Chronic airflow limitation
GeneRIF:14530202
GeneRIF:12761563
A group of disorders affecting the bronchi and the lung parenchyma. It is characterized by chronic and irreversible obstruction of the airflow. It includes chronic bronchitis and pulmonary emphysema.[accessedResource: NCIt:C3199][accessDate: 10-05-2010]
chronic obstructive airways disease NOS (disorder)
GeneRIF:16236890
Chronic obstructive airways disease NOS (disorder)[accessedResource: SNOMEDCT:196003006][accessDate: 10-05-2010]
GeneRIF:15820782
GeneRIF:15723202
chronic airway obstruction, not elsewhere classified
Chronic obstructive lung disease, NEC
Chronic Obstructive Airway Disease[accessedResource: MSH:D029424][accessDate: 10-05-2010]
GeneRIF:12838770
COPD NOS
CAFL - Chronic airflow limitation[accessedResource: SNOMEDCT:13645005][accessDate: 10-05-2010]
chronic obstructive lung disease (disorder)[accessedResource: DOID:3083][accessDate: 10-05-2010]
COLD[accessedResource: SNOMEDCT:13645005][accessDate: 10-05-2010]
COAD[accessedResource: MSH:D029424][accessDate: 10-05-2010]
COLD
GeneRIF:11757623
chronic obstructive lung disease (disorder)
chronic obstructive lung disease [Ambiguous][accessedResource: DOID:3083][accessDate: 10-05-2010]
Chronic obstructive pulmonary disease finding (finding)
DOID:3083
GeneRIF:16166745
CAO - Chronic airflow obstruction[accessedResource: SNOMEDCT:13645005][accessDate: 10-05-2010]
GeneRIF:14985398
Chronic airflow limitation
CHRONIC OBSTRUCTIVE LUNG DIS
DISEASE (COPD), CHRONIC OBSTRUCTIVE[accessedResource: NCIt:C3199][accessDate: 10-05-2010]
GeneRIF:16126934
GeneRIF:15766560
GeneRIF:12172904
COAD - Chronic obstructive airways disease[accessedResource: SNOMEDCT:13645005][accessDate: 10-05-2010]
GeneRIF:16002569
GeneRIF:14720432
GeneRIF:12861851
SNOMEDCT:196003006
Chronic airway obstruction[accessedResource: SNOMEDCT:13645005][accessDate: 10-05-2010]
chronic airway obstruction, NEC in ICD9CM_2006[accessedResource: DOID:3083][accessDate: 10-05-2010]
Chronic Airflow Obstruction
Airflow Obstructions, Chronic[accessedResource: MSH:D029424][accessDate: 10-05-2010]
chronic obstructive lung disease[accessedResource: DOID:3083][accessDate: 10-05-2010]
GeneRIF:15175276
Chronic obstructive pulmonary disease finding[accessedResource: SNOMEDCT:413846005][accessDate: 10-05-2010]
Chronic Obstructive Airway Disease
chronic obstructive pulmonary disease and allied conditions[accessedResource: DOID:3083][accessDate: 10-05-2010]
Chronic Airflow Obstruction[accessedResource: MSH:D029424][accessDate: 10-05-2010]
An assay where proteins in a sample are detected, quantified or otherwise analysed using mass spectrometry
proteomic profiling by mass spectrometer
A rapid onset form of SYSTEMIC SCLERODERMA with progressive widespread SKIN thickening over the arms, the legs and the trunk, resulting in stiffness and disability.[accessedResource: MSH:D045743][accessDate: 10-05-2010]
diffuse scleroderma
A rapid onset form of SYSTEMIC SCLERODERMA with progressive widespread SKIN thickening over the arms, the legs and the trunk, resulting in stiffness and disability.
Systemic sclerosis, diffuse (disorder)[accessedResource: SNOMEDCT:128460000][accessDate: 10-05-2010]
Diffuse cutaneous scleroderma
Diffuse cutaneous scleroderma[accessedResource: SNOMEDCT:128460000][accessDate: 10-05-2010]
DOID:1580
Scleroderma, Progressive
SNOMEDCT:128460000
GeneRIF:16320328
Systemic sclerosis, diffuse
diffuse systemic sclerosis[accessedResource: DOID:1580][accessDate: 10-05-2010]
Systemic Sclerosis, Progressive[accessedResource: MSH:D045743][accessDate: 10-05-2010]
Progressive Scleroderma[accessedResource: MSH:D045743][accessDate: 10-05-2010]
Sclerosis, Progressive Systemic
Systemic sclerosis, diffuse (disorder)
Diffuse cutaneous systemic sclerosis[accessedResource: SNOMEDCT:128460000][accessDate: 10-05-2010]
Diffuse cutaneous systemic sclerosis
MSH:D045743
James Malone
similar to CL:0000837, but in fetal liver
fetal liver hematopoietic progenitor cell
Tomasz Adamusiak
Jie Zheng
Kasumi2
James Malone
Ele Holloway
Mitochondrial Myopathy, Lactic Acidosis, Stroke-Like Episode
Mitochondrial Myopathy, Lactic Acidosis, Stroke-Like Episode[accessedResource: MSH:D017241][accessDate: 10-05-2010]
MELAS[accessedResource: MSH:D017241][accessDate: 10-05-2010]
A mitochondrial disorder characterized by focal or generalized seizures, episodes of transient or persistent neurologic dysfunction resembling strokes, and ragged-red fibers on muscle biopsy. Affected individuals tend to be normal at birth through early childhood, then experience growth failure, episodic vomiting, and recurrent cerebral insults resulting in visual loss and hemiparesis. The cortical lesions tend to occur in the parietal and occipital lobes and are not associated with vascular occlusion. VASCULAR HEADACHE is frequently associated and the disorder tends to be familial. (From Joynt, Clinical Neurology, 1992, Ch56, p117)
A mitochondrial disorder characterized by focal or generalized seizures, episodes of transient or persistent neurologic dysfunction resembling strokes, and ragged-red fibers on muscle biopsy. Affected individuals tend to be normal at birth through early childhood, then experience growth failure, episodic vomiting, and recurrent cerebral insults resulting in visual loss and hemiparesis. The cortical lesions tend to occur in the parietal and occipital lobes and are not associated with vascular occlusion. VASCULAR HEADACHE is frequently associated and the disorder tends to be familial. (From Joynt, Clinical Neurology, 1992, Ch56, p117)[accessedResource: MSH:D017241][accessDate: 10-05-2010]
MSH:D017241
James Malone
MELAS syndrome
MELAS
DOID:3687
GeneRIF:15466014
HP:0001643
FMA:79871
ductus Botalli
ductus arteriosus
James Malone
Ele Holloway
square meter
James Malone
A square meter is an area unit which is equal to an area enclosed by a square with sides each 1 meter long.
An area unit which is equal to an area enclosed by a square with sides each 1 meter long.
UO:0000080
true
m^2
square metre
http://www.ebi.ac.uk/efo/EFO_0001694
NCIH1770
James Malone
Ele Holloway
BTO:0001325
ganglion cervicale superius
The uppermost ganglion on the sympathetic trunk, lying behind the internal carotid artery and in front of the second and third cervical vertebrae; it gives rise to postganglionic fibers to the heart via cervical cardiac nerves, to the pharyngeal plexus and thence to the larynx and pharynx, and to the head via the external and internal carotid plexuses.
ganglion cervicale superius[accessedResource: BTO:0001325][accessDate: 10-05-2010]
The uppermost ganglion on the sympathetic trunk, lying behind the internal carotid artery and in front of the second and third cervical vertebrae; it gives rise to postganglionic fibers to the heart via cervical cardiac nerves, to the pharyngeal plexus and thence to the larynx and pharynx, and to the head via the external and internal carotid plexuses.[accessedResource: BTO:0001325][accessDate: 10-05-2010]
superior cervical ganglion
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158852&type=germplasm
CS57828 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158852&type=germplasm
CS57828
James Malone
Extra-Adrenal Chromaffinoma
James Malone
Extraadrenal Pheochromocytoma[accessedResource: NCIt:C48576][accessDate: 10-05-2010]
Extra-Adrenal Chromaffinoma[accessedResource: NCIt:C48576][accessDate: 10-05-2010]
A benign or malignant sympathetic paraganglioma arising from paraganglia outside the adrenal gland. Clinical symptoms are related to secretion of catecholamines. Representative examples include the superior and inferior paraaortic and bladder paragangliomas.
Extraadrenal Pheochromocytoma
A benign or malignant sympathetic paraganglioma arising from paraganglia outside the adrenal gland. Clinical symptoms are related to secretion of catecholamines. Representative examples include the superior and inferior paraaortic and bladder paragangliomas.[accessedResource: NCIt:C48576][accessDate: 10-05-2010]
NCIt:C48576
Extra-Adrenal Chromaffin Neoplasm
extra-adrenal sympathetic paraganglioma
Extra-Adrenal Sympathetic Paraganglionic Neoplasm[accessedResource: NCIt:C48576][accessDate: 10-05-2010]
Extra-Adrenal Pheochromocytoma
Extra-Adrenal Pheochromocytoma[accessedResource: NCIt:C48576][accessDate: 10-05-2010]
Extra-Adrenal Chromaffin Neoplasm[accessedResource: NCIt:C48576][accessDate: 10-05-2010]
Extra-Adrenal Sympathetic Paraganglionic Neoplasm
GM12154
James Malone
An assay in which the transcriptome of a biological sample is analysed by Massively Parallel Signature Sequencing (MPSS)
transcription profiling by MPSS
Anna Farne
http://jaxmice.jax.org/strain/009294.html
ILSXISS122/TejJ
Tomasz Adamusiak
ZFS:0000020
gastrula 75%-epiboly
James Malone
MCC:0000500
mIMCD3
mIMCD-3
James Malone
Ele Holloway
The organ of hearing.[accessedResource: BTO:0000368][accessDate: 10-05-2010]
auditory system
AAO:0000631
ZFA:0001138
ear
MFO:0003660
otic vesicle[accessedResource: MAT:0000138][accessDate: 10-05-2010]
XAO:0000189
Tomasz Adamusiak
EV:0100353
auris[accessedResource: BTO:0000368][accessDate: 10-05-2010]
NIFSTD:birnlex_1062
BTO:0000368
MAT:0000138
EHDAA:502
EMAPA:16193
vestibuloauditpry system
auris
auditory system[accessedResource: MAT:0000138][accessDate: 10-05-2010]
vestibuloauditpry system[accessedResource: MAT:0000138][accessDate: 10-05-2010]
The organ of hearing.
auditory apparatus
TAO:0001138
James Malone
FMAID:52780
otic vesicle
auditory apparatus[accessedResource: MAT:0000138][accessDate: 10-05-2010]
MA:0000236
United States Patent 20040023256
An assay in which surface-bound, translationally competent ribosome complexes are used to generate a translation profile for mRNA, which mRNA may be a single molecular species, or a combination of species, including complex mixtures such as those found in the set of mRNAs isolated from a cell or tissue. One or more components of the surface-bound ribosome complex may be labeled at specific positions to permit analysis of multiple or single molecules for determination of ribosomal conformational changes and translation kinetics. Translation profiles are used as the basis for comparison of an mRNA or set of mRNA species. The translation profile can be used to determine such characteristics as kinetics of initiation, kinetic of elongation, identity of the polypeptide product, and the like. Analysis of translation profiles may be used to determine differential gene expression, optimization of mRNA sequences for expression, screening drug candidates for an effect on translation.
translation profiling
James Malone
gastric cancer
ICD9:230.2
DOID:9138
gastric carcinoma
carcinoma in situ of stomach NOS (disorder)[accessedResource: DOID:9138][accessDate: 10-05-2010]
James Malone
gastric carcinoma in situ[accessedResource: DOID:9138][accessDate: 10-05-2010]
carcinoma in situ of stomach (disorder)
carcinoma in situ of stomach (disorder)[accessedResource: DOID:9138][accessDate: 10-05-2010]
carcinoma in situ of stomach[accessedResource: DOID:9138][accessDate: 10-05-2010]
CA IN SITU STOMACH
CA IN SITU STOMACH[accessedResource: ICD9:230.2][accessDate: 10-05-2010]
gastric carcinoma in situ
carcinoma in situ of stomach NOS (disorder)
Carcinoma in situ of stomach
MO_220
haploid, diploid, triploid
The number of single sets of chromosomes in the cell or an organism e.g., haploid, diploid, triploid, etc.
ploidy
Tomasz Adamusiak
Jie Zheng
James Malone
FMA:62211
MA:0000870
Medial geniculate nuclei[accessedResource: FMA:62211][accessDate: 10-05-2010]
Medial geniculate body
Medial geniculate nuclei
Medial geniculate complex
James Malone
Medial geniculate complex[accessedResource: FMA:62211][accessDate: 10-05-2010]
medial geniculate nucleus
MGN
Medial geniculate body[accessedResource: FMA:62211][accessDate: 10-05-2010]
true
MAT:0000000
anatomy basic component
James Malone
James Malone
colon sigmoideum
sigmoid colon
sigmoid flexure[accessedResource: BTO:0000645][accessDate: 10-05-2010]
BTO:0000645
MAT:0000314
FMAID:14548
sigmoid flexure
colon sigmoideum[accessedResource: BTO:0000645][accessDate: 10-05-2010]
pelvic colon
The S-shaped part of the colon which lies in the pelvis, extending from the pelvic brim to the third segment of the sacrum, and continuous above with the descending (or iliac) colon and below with the rectum.[accessedResource: BTO:0000645][accessDate: 10-05-2010]
pelvic colon[accessedResource: BTO:0000645][accessDate: 10-05-2010]
The S-shaped part of the colon which lies in the pelvis, extending from the pelvic brim to the third segment of the sacrum, and continuous above with the descending (or iliac) colon and below with the rectum.
substantia nigra and ventral tegmental area
Tomasz Adamusiak
Jie Zheng
GM12763
James Malone
normal cell line
MG63
James Malone
Ele Holloway
PO:0009013
A formative plant tissue usually made up of small cells capable of dividing indefinitely and giving rise to similar cells or to cells that differentiate to produce the definitive tissues and organs.
meristem
MAT:0000006
James Malone
Undifferentiated plant issue - the botanical equivalent of animal stem cells[accessedResource: MAT:0000006][accessDate: 10-05-2010]
Meristem is a plant component consisting of undifferentiated plant issue - the botanical equivalent of animal stem cells.
BTO:0000852
A formative plant tissue usually made up of small cells capable of dividing indefinitely and giving rise to similar cells or to cells that differentiate to produce the definitive tissues and organs.[accessedResource: BTO:0000852][accessDate: 10-05-2010]
Undifferentiated plant issue - the botanical equivalent of animal stem cells
deferrioxamine B
Deferrioxamine
InChIKey=UBQYURCVBFRUQT-VEORKLDJCD
deferoxamine
C25H48N6O8
deferoxaminum
An acyclic desferrioxamine that has formula C25H48N6O8.
Desferrioxamine
DFO
CC(=O)N(O)CCCCCNC(=O)CCC(=O)N(O)CCCCCNC(=O)CCC(=O)N(O)CCCCCN
CHEBI:4356
deferoxamina
N'-{5-[acetyl(hydroxy)amino]pentyl}-N-(5-{4-[(5-aminopentyl)(hydroxy)amino]-4-oxobutanamido}pentyl)-N-hydroxybutanediamide
InChI=1/C25H48N6O8/c1-21(32)29(37)18-9-3-6-16-27-22(33)12-14-25(36)31(39)20-10-4-7-17-28-23(34)11-13-24(35)30(38)19-8-2-5-15-26/h37-39H,2-20,26H2,1H3,(H,27,33)(H,28,34)/f/h27-28H
http://www.ebi.ac.uk/efo/EFO_0001518
desferrioxamine B
Deferoxamin
HEK293T
James Malone
4-(1-hydroxy-1-methylethyl)-2-propyl-1-{[2'-(1H-tetrazol-5-yl)[1,1'-biphenyl]-4-yl]methyl}-1H-imidazole-5-carboxylic acid
InChIKey=VTRAEEWXHOVJFV-NEQLIHFBCB
4-(hydroxy-1-methylethyl)-2-propyl-1-{[2'-(1H-tetrazol-5-yl)-1,1'-biphenyl-4-yl]methyl}-1H-imidazole-5-carboxylic acid
InChI=1/C24H26N6O3/c1-4-7-19-25-21(24(2,3)33)20(23(31)32)30(19)14-15-10-12-16(13-11-15)17-8-5-6-9-18(17)22-26-28-29-27-22/h5-6,8-13,33H,4,7,14H2,1-3H3,(H,31,32)(H,26,27,28,29)/f/h26,31H
C24H26N6O3
http://www.ebi.ac.uk/efo/EFO_0001587
olmesartan
CCCc1nc(c(C(O)=O)n1Cc1ccc(cc1)-c1ccccc1-c1nnn[nH]1)C(C)(C)O
CHEBI:48416
A biphenylyltetrazole that has formula C24H26N6O3.
4-(1-hydroxy-1-methylethyl)-2-propyl-1-{[2'-(1H-tetrazol-5-yl)biphenyl-4-yl]methyl}-1H-imidazole-5-carboxylic acid
GM12249
James Malone
NCIH720
James Malone
Ele Holloway
SNOMEDCT:268815007
FET GROWTH RETARD WTNOS
Microsomic baby
Microsomia[accessedResource: SNOMEDCT:22033007][accessDate: 10-05-2010]
Microsomic baby[accessedResource: SNOMEDCT:22033007][accessDate: 10-05-2010]
IUGR - Intrauterine growth retardation
Intrauterine growth retardation[accessedResource: SNOMEDCT:22033007][accessDate: 10-05-2010]
GeneRIF:12362237
FET GRWTH RET 1500-1749G
ICD9:764.96
Foetal growth retardation, NOS
GeneRIF:12433638
Intrauterine growth retardation, NOS[accessedResource: SNOMEDCT:22033007][accessDate: 10-05-2010]
FGR - Fetal growth retardation
Fetal growth retardation, unspecified, less than 500 grams
James Malone
Fetal growth retardation, unspecified, 750-999 grams
GeneRIF:12376298
Fetal growth retardation, unspecified, 1,000-1,249 grams
Fetal growth retardation, unspecified, 1,750-1,999 grams
ICD9:764.95
Intrauterine growth retardation, NOS
Fetal growth retardation, unspecified, 2,500+ grams
Fetal growth retardation, unspecified, 1,750-1,999 grams[accessedResource: ICD9:764.97][accessDate: 10-05-2010]
Fetal growth retardation, unspecified, 1,000-1,249 grams[accessedResource: ICD9:764.94][accessDate: 10-05-2010]
Fetal growth retardation
Fetal growth retardation, unspecified, 750-999 grams[accessedResource: ICD9:764.93][accessDate: 10-05-2010]
Fetal growth retardation, unspecified, 1,500-1,749 grams
Poor fetal growth
GeneRIF:12072378
Poor fetal growth state
Fetal growth retardation (disorder)
GeneRIF:11903419
Fetal growth retardation NOS (disorder)[accessedResource: SNOMEDCT:268815007][accessDate: 10-05-2010]
FET GRWTH RET 1000-1249G
ICD9:764.9
GeneRIF:11738801
FET GROWTH RET 750-999G
GeneRIF:12788896
ICD9:764.97
FET GRWTH RET 1750-1999G
Fetal growth retardation, unspecified, 500-749 grams[accessedResource: ICD9:764.92][accessDate: 10-05-2010]
ICD9:764.92
Fetal growth retardation[accessedResource: SNOMEDCT:22033007][accessDate: 10-05-2010]
Intrauterine growth retardation
FET GROWTH RET 500-749G[accessedResource: ICD9:764.92][accessDate: 10-05-2010]
Poor fetal growth[accessedResource: SNOMEDCT:22033007][accessDate: 10-05-2010]
IUGR - Intrauterine growth retardation[accessedResource: SNOMEDCT:22033007][accessDate: 10-05-2010]
FET GROWTH RET 2500+G[accessedResource: ICD9:764.99][accessDate: 10-05-2010]
GeneRIF:12920078
Fetal growth retardation, unspecified [weight]
ICD9:764.90
Microsomia
FET GROWTH RETARD WTNOS[accessedResource: ICD9:764.90][accessDate: 10-05-2010]
Fetal growth retardation NOS[accessedResource: SNOMEDCT:268815007][accessDate: 10-05-2010]
GeneRIF:15371566
FET GRWTH RET 1750-1999G[accessedResource: ICD9:764.97][accessDate: 10-05-2010]
Fetal growth retardation, unspecified, 2,000-2,499 grams[accessedResource: ICD9:764.98][accessDate: 10-05-2010]
Fetal growth retardation (disorder)[accessedResource: SNOMEDCT:22033007][accessDate: 10-05-2010]
Fetal growth retardation, unspecified, 1,250-1,499 grams[accessedResource: ICD9:764.95][accessDate: 10-05-2010]
Fetal growth retardation, unspecified, 500-749 grams
GeneRIF:12832488
ICD9:764.98
FET GROWTH RET 2500+G
FGR - Fetal growth retardation[accessedResource: SNOMEDCT:22033007][accessDate: 10-05-2010]
GeneRIF:12576245
GeneRIF:11924936
Fetal growth retardation, unspecified, 2,500+ grams[accessedResource: ICD9:764.99][accessDate: 10-05-2010]
Fetal growth retardation, unspecified, 1,500-1,749 grams[accessedResource: ICD9:764.96][accessDate: 10-05-2010]
FET GROWTH RETARD <500G[accessedResource: ICD9:764.91][accessDate: 10-05-2010]
SNOMEDCT:22033007
FET GRWTH RET 2000-2499G[accessedResource: ICD9:764.98][accessDate: 10-05-2010]
GeneRIF:15712600
GeneRIF:14692644
GeneRIF:15625086
FET GRWTH RET 1500-1749G[accessedResource: ICD9:764.96][accessDate: 10-05-2010]
Fetal growth retardation, unspecified, 1,250-1,499 grams
FET GRWTH RET 1250-1499G[accessedResource: ICD9:764.95][accessDate: 10-05-2010]
GeneRIF:11738800
Fetal growth retardation, NOS
ICD9:764.91
FET GRWTH RET 1000-1249G[accessedResource: ICD9:764.94][accessDate: 10-05-2010]
FET GROWTH RETARD <500G
Poor fetal growth state[accessedResource: SNOMEDCT:22033007][accessDate: 10-05-2010]
FET GROWTH RET 750-999G[accessedResource: ICD9:764.93][accessDate: 10-05-2010]
GeneRIF:14688210
GeneRIF:15166008
FET GROWTH RET 500-749G
FET GRWTH RET 2000-2499G
Fetal growth retardation, unspecified [weight][accessedResource: ICD9:764.90][accessDate: 10-05-2010]
Fetal growth retardation NOS (disorder)
Fetal growth retardation, unspecified, less than 500 grams[accessedResource: ICD9:764.91][accessDate: 10-05-2010]
DOID:13294
Fetal growth retardation, unspecified, 2,000-2,499 grams
FET GRWTH RET 1250-1499G
ICD9:764.99
ICD9:764.94
ICD9:764.93
Foetal growth retardation, NOS[accessedResource: SNOMEDCT:22033007][accessDate: 10-05-2010]
fetal growth restriction
GeneRIF:11809917
GeneRIF:15695771
The scalar number of injections administered to a material or organism.
number of injections
James Malone
EV:0100115
The mucous membrane lining the uterus.[accessedResource: BTO:0001422][accessDate: 10-05-2010]
Tunica mucosa (Endometrium)[accessedResource: FMAID:17742][accessDate: 10-05-2010]
James Malone
BTO:0001422
endometrium
uterine endometrium[accessedResource: BTO:0001422][accessDate: 10-05-2010]
Tunica mucosa (Endometrium)
uterine endometrium
FMAID:17742
MAT:0000319
The mucous membrane lining the uterus.
http://www.arabidopsis.org/servlets/TairObject?id=1005158775&type=germplasm
CS57751 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158775&type=germplasm
CS57751
James Malone
SNU182
James Malone
Ele Holloway
NT-1
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158883&type=germplasm
CS57859 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158883&type=germplasm
CS57859
James Malone
A highly potent opiate analgesic psychoactive drug, morphine acts directly on the central nervous system (CNS) to relieve pain. Morphine has a high potential for addiction; tolerance and both physical and psychological dependence develop rapidly.
InChIKey=BQJCRHHNABKAKU-KBQPJGBKBH
(5R,6S,9R,13S,14R)-4,5-epoxy-N-methyl-7-morphinen-3,6-diol
(7R,7AS,12BS)-3-METHYL-2,3,4,4A,7,7A-HEXAHYDRO-1H-4,12-METHANO[1]BENZOFURO[3,2-E]ISOQUINOLINE-7,9-DIOL
InChI=1/C17H19NO3/c1-18-7-6-17-10-3-5-13(20)16(17)21-15-12(19)4-2-9(14(15)17)8-11(10)18/h2-5,10-11,13,16,19-20H,6-8H2,1H3/t10-,11+,13-,16-,17-/m0/s1
morphium
morphine
James Malone
17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol
morfina
CHEBI:17303
(5alpha,6alpha)-didehydro-4,5-epoxy-17-methylmorphinan-3,6-diol
Ele Holloway
(5alpha,6alpha)-17-methyl-7,8-didehydro-4,5-epoxymorphinan-3,6-diol
Morphin
C17H19NO3
http://www.ebi.ac.uk/efo/EFO_0002414
morphinum
A morphinane alkaloid that has formula C17H19NO3.
[H][C@]12C=C[C@H](O)[C@@H]3Oc4c(O)ccc5C[C@H]1N(C)CC[C@@]23c45
Morphia
MA:0000395
Female pudendum[accessedResource: FMAID:20462][accessDate: 10-05-2010]
Female pudendum
Puboperineal region
EV:0100118
vulva
The external female genital organs, including the clitoris, vaginal lips, and the opening to the vagina.
BTO:0001055
Puboperineal region[accessedResource: FMAID:20462][accessDate: 10-05-2010]
MAT:0000169
James Malone
FBbt:00004926
The external female genital organs, including the clitoris, vaginal lips, and the opening to the vagina.[accessedResource: BTO:0001055][accessDate: 10-05-2010]
FMAID:20462
WBbt:0006748
OntologyMappingImporter following MAT:0000257
James Malone
scales
MO_108
scale
MAT:0000257
Jie Zheng
scales[accessedResource: ZFA:0000277][accessDate: 10-05-2010]
Tomasz Adamusiak
ZFA:0000277
A volume unit which is equal to one thousandth of one millionth of a liter or 10^[-9] L.
A nanoliter is a volume unit which is equal to one thousandth of one millionth of a liter or 10^-9 L.
nl
MO_754
Tomasz Adamusiak
James Malone
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001704
nanoliter
true
CL:0000138
Polymorphic cell that form cartilage.
Polymorphic cell that form cartilage.[accessedResource: CL:0000138][accessDate: 10-05-2010]
chondrocyte
James Malone
ITM-ST
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158729&type=germplasm
CS57705 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158729&type=germplasm
CS57705
James Malone
osteoma
Tomasz Adamusiak
James Malone
angiotensin-converting enzyme inhibitor
ACE inhibitor
http://www.ebi.ac.uk/efo/EFO_0001836
CHEBI:35457
angiotensin-converting enzyme inhibito
James Malone
GeneRIF:15149855
Liposarcoma, no ICD-O subtype (morphologic abnormality)
Liposarcomas
Liposarcoma NOS (morphologic abnormality)
James Malone
A malignant tumor derived from primitive or embryonal lipoblastic cells. It may be composed of well-differentiated fat cells or may be dedifferentiated: myxoid (LIPOSARCOMA, MYXOID), round-celled, or pleomorphic, usually in association with a rich network of capillaries. Recurrences are common and dedifferentiated liposarcomas metastasize to the lungs or serosal surfaces. (From Dorland, 27th ed; Stedman, 25th ed)
Liposarcomas, Pleomorphic
A malignant lipomatous neoplasm that arises in fat cells in deep soft tissue retroperitoneum.
[M]Liposarcoma NOS (morphologic abnormality)
Dedifferentiated Liposarcoma[accessedResource: MSH:D008080][accessDate: 10-05-2010]
Liposarcoma, NOS
GeneRIF:14989736
SNOMEDCT:189777004
DOID:3382
MSH:D008080
A usually painless malignant tumor that arises from adipose tissue. Microscopically, it may contain a spectrum of neoplastic adipocytes ranging from lipoblasts to pleomorphic malignant adipocytes. Representative morphologic variants include: well differentiated, dedifferentiated, pleomorphic, and myxoid/round cell liposarcoma. The metastatic potential is higher in less differentiated tumors.
Liposarcoma, Pleomorphic[accessedResource: MSH:D008080][accessDate: 10-05-2010]
Liposarcoma, NOS[accessedResource: SNOMEDCT:49430005][accessDate: 10-05-2010]
[M]Liposarcoma NOS[accessedResource: SNOMEDCT:189777004][accessDate: 10-05-2010]
Fibroliposarcoma
Dedifferentiated Liposarcomas[accessedResource: MSH:D008080][accessDate: 10-05-2010]
A usually painless malignant tumor that arises from adipose tissue. Microscopically, it may contain a spectrum of neoplastic adipocytes ranging from lipoblasts to pleomorphic malignant adipocytes. Representative morphologic variants include: well differentiated, dedifferentiated, pleomorphic, and myxoid/round cell liposarcoma. The metastatic potential is higher in less differentiated tumors.[accessedResource: NCIt:C3194][accessDate: 10-05-2010]
Liposarcoma, no ICD-O subtype
A malignant tumor derived from primitive or embryonal lipoblastic cells. It may be composed of well-differentiated fat cells or may be dedifferentiated: myxoid (LIPOSARCOMA, MYXOID), round-celled, or pleomorphic, usually in association with a rich network of capillaries. Recurrences are common and dedifferentiated liposarcomas metastasize to the lungs or serosal surfaces. (From Dorland, 27th ed; Stedman, 25th ed)[accessedResource: MSH:D008080][accessDate: 10-05-2010]
A malignant lipomatous neoplasm that arises in fat cells in deep soft tissue retroperitoneum.[accessedResource: DOID:3382][accessDate: 10-05-2010]
liposarcoma
[M]Liposarcoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189777004][accessDate: 10-05-2010]
Liposarcoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:49430005][accessDate: 10-05-2010]
Pleomorphic Liposarcomas[accessedResource: MSH:D008080][accessDate: 10-05-2010]
Liposarcoma (disorder)[accessedResource: SNOMEDCT:254829001][accessDate: 10-05-2010]
Liposarcoma (morphologic abnormality)
GeneRIF:15201968
Liposarcoma NOS (morphologic abnormality)[accessedResource: DOID:3382][accessDate: 10-05-2010]
Liposarcomas, Dedifferentiated
[M]Liposarcoma NOS
Dedifferentiated Liposarcoma
Pleomorphic Liposarcoma
Liposarcoma morphology[accessedResource: SNOMEDCT:49430005][accessDate: 10-05-2010]
Fibroliposarcoma[accessedResource: SNOMEDCT:49430005][accessDate: 10-05-2010]
NCIt:C3194
SNOMEDCT:49430005
Liposarcoma, no ICD-O subtype[accessedResource: SNOMEDCT:49430005][accessDate: 10-05-2010]
Liposarcoma morphology
Liposarcomas[accessedResource: MSH:D008080][accessDate: 10-05-2010]
SNOMEDCT:254829001
Liposarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:49430005][accessDate: 10-05-2010]
Liposarcoma (disorder)
Geniculate nucleus (body structure)
SNOMEDCT:279108008
Geniculate nucleus (body structure)[accessedResource: SNOMEDCT:279108008][accessDate: 10-05-2010]
James Malone
geniculate nucleus
Tomasz Adamusiak
CL:0000451
CL:0000451[accessedResource: BTO:0002042][accessDate: 10-05-2010]
James Malone
interdigitating cell
reticular cell
veiled cell[accessedResource: BTO:0002042][accessDate: 10-05-2010]
reticular cell[accessedResource: BTO:0002042][accessDate: 10-05-2010]
interdigitating cell[accessedResource: CL:0000451][accessDate: 10-05-2010]
BTO:0002042
A special type of cell that is a key regulator of the immune system, acting as a professional antigen-presenting cell (APC) capable of activating naive T cells and stimulating the growth and differentiation of B cells. Dendritic cells are found, for example, in the lymph nodes and spleen. As an APC, a dendritic cell can retain antigen for long periods on its surface, present the antigen to a T or B cell and so influence their behavior.
dendritic cell
A cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.
A special type of cell that is a key regulator of the immune system, acting as a professional antigen-presenting cell (APC) capable of activating naive T cells and stimulating the growth and differentiation of B cells. Dendritic cells are found, for example, in the lymph nodes and spleen. As an APC, a dendritic cell can retain antigen for long periods on its surface, present the antigen to a T or B cell and so influence their behavior.[accessedResource: BTO:0002042][accessDate: 10-05-2010]
A cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.[accessedResource: CL:0000451][accessDate: 10-05-2010]
CL:0000451
veiled cell
birnlex_7081
Theiler stage 26
Tomasz Adamusiak
Jie Zheng
A HGF is a cell line.
A HGF is all of the following: something that has as quality a normal, something that derives from a Homo
sapiens, and something that derives from a fibroblast.
Human Gingival Fibroblasts
HGF
Natural Language Generator 8th April 2010
James Malone
A biological sex quality inhering in an organism or a population with both male and female sexual organs in one individual.[accessedResource: PATO:0001340][accessDate: 10-05-2010]
PATO:0001340
MO_356
James Malone
hermaphrodite
NCIt:C45909
A biological sex quality inhering in an organism or a population with both male and female sexual organs in one individual.
intersex
An organism having both male and female sexual characteristics and organs.[accessedResource: NCIt:C45909][accessDate: 10-05-2010]
Tomasz Adamusiak
An organism having both male and female sexual characteristics and organs.
Jie Zheng
intersex[accessedResource: PATO:0001340][accessDate: 10-05-2010]
A viral disorder characterized by high FEVER, dry COUGH, shortness of breath (DYSPNEA) or breathing difficulties, and atypical PNEUMONIA. A virus in the genus CORONAVIRUS is the suspected agent.
GeneRIF:15243926
GeneRIF:12969506
GeneRIF:15187168
James Malone
SARS
A respiratory system infectious disease that is a severe respiratory illness characterized by fever, headache, body aches, a dry cough, and hypoxia and pneumonia caused by a single-stranded RNA virus of the genus SARS coronavirus (SARS-CoV).[accessedResource: DOID:2945][accessDate: 10-05-2010]
GeneRIF:15569689
GeneRIF:15749762
SARS-associated coronavirus[accessedResource: DOID:2945][accessDate: 10-05-2010]
A viral disorder characterized by high FEVER, dry COUGH, shortness of breath (DYSPNEA) or breathing difficulties, and atypical PNEUMONIA. A virus in the genus CORONAVIRUS is the suspected agent.[accessedResource: MSH:D045169][accessDate: 10-05-2010]
GeneRIF:15958670
GeneRIF:15788388
GeneRIF:15452265
Severe acute respiratory syndrome (disorder)[accessedResource: SNOMEDCT:398447004][accessDate: 10-05-2010]
A respiratory system infectious disease that is a severe respiratory illness characterized by fever, headache, body aches, a dry cough, and hypoxia and pneumonia caused by a single-stranded RNA virus of the genus SARS coronavirus (SARS-CoV).
GeneRIF:16195357
GeneRIF:15326590
GeneRIF:15766558
GeneRIF:14647384
GeneRIF:16299304
SARS ASSOC CORONAVIRUS
SARS-CoV infection
GeneRIF:15731040
ICD9:079.82
MSH:D045169
GeneRIF:15518555
SARS[accessedResource: DOID:2945][accessDate: 10-05-2010]
SNOMEDCT:398447004
GeneRIF:15345712
SARS-associated coronavirus
GeneRIF:15306699
GeneRIF:15522242
GeneRIF:15992957
Severe acute respiratory syndrome (disorder)
GeneRIF:15381116
GeneRIF:15840526
SARS-CoV infection[accessedResource: DOID:2945][accessDate: 10-05-2010]
SARS ASSOC CORONAVIRUS[accessedResource: ICD9:079.82][accessDate: 10-05-2010]
Severe acute respiratory syndrome is a respiratory tract infection described as a severe respiratory illness that is transmitted especially by contact with infectious material (as respiratory droplets or body fluids), is caused by a single-stranded RNA virus of the genus Coronavirus (SARS-CoV), is characterized by fever, headache, body aches, a dry cough, and hypoxia and usually by pneumonia.
severe acute respiratory syndrome
DOID:2945
MAT:0000153
BTO:0000294
dermis
A collagenous layer of the skin subjacent to the epidermis and covering the hypodermis. It contains various types of cells (e.g. fibroblasts, pigment cells, nerve, blood vessels and scales.
Dense irregular connective tissue which consists of a papillary layer and a reticular layer.[accessedResource: FMAID:70323][accessDate: 10-05-2010]
cutis[accessedResource: BTO:0000294][accessDate: 10-05-2010]
EMAPA:17527
corium
James Malone
The sensitive vascular inner mesodermic layer of the skin.
corium[accessedResource: BTO:0000294][accessDate: 10-05-2010]
MA:0000152
FMAID:70323
cutis
EV:0100154
AAO:0000128
SAEL:27
Dense irregular connective tissue which consists of a papillary layer and a reticular layer.
A collagenous layer of the skin subjacent to the epidermis and covering the hypodermis. It contains various types of cells (e.g. fibroblasts, pigment cells, nerve, blood vessels and scales.[accessedResource: ZFA:0001119][accessDate: 10-05-2010]
XAO:0000217
The sensitive vascular inner mesodermic layer of the skin.[accessedResource: BTO:0000294][accessDate: 10-05-2010]
ZFA:0001119
acetylcholinesterase inhibitors
acetylcholine esterase inhibitor
http://www.ebi.ac.uk/efo/EFO_0001868
CHEBI:38462
acetylcholinesterase inhibitor
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158654&type=germplasm
CS57630 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158654&type=germplasm
CS57630
James Malone
SNOMEDCT:35728003
familial cardiomyopathy
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158580&type=germplasm
CS57556 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158580&type=germplasm
CS57556
James Malone
SKLMS1
James Malone
Ele Holloway
ZF4
James Malone
Count, Low Sperm
James Malone
GeneRIF:15064832
GeneRIF:15379971
Low Sperm Counts
Low Sperm Counts[accessedResource: MSH:D009845][accessDate: 10-05-2010]
Oligozoospermia[accessedResource: MSH:D009845][accessDate: 10-05-2010]
MSH:D009845
Oligospermia
GeneRIF:15044259
GeneRIF:12634316
DOID:14227
GeneRIF:12399529
GeneRIF:16123080
GeneRIF:11499325
Azoospermia (finding)[accessedResource: DOID:14227][accessDate: 10-05-2010]
GeneRIF:16275267
GeneRIF:15253135
Oligozoospermia
Oligospermia[accessedResource: MSH:D009845][accessDate: 10-05-2010]
azoospermia
GeneRIF:12366783
Sperm Count, Low[accessedResource: MSH:D009845][accessDate: 10-05-2010]
Azoospermia (finding)
A condition of suboptimal concentration of SPERMATOZOA in the ejaculated SEMEN to ensure successful FERTILIZATION of an OVUM. In humans, oligospermia is defined as a sperm count below 20 million per milliliter semen.
GeneRIF:12161499
GeneRIF:11869379
GeneRIF:12399527
ICD9:606.0
GeneRIF:16213863
GeneRIF:15220464
A condition of suboptimal concentration of SPERMATOZOA in the ejaculated SEMEN to ensure successful FERTILIZATION of an OVUM. In humans, oligospermia is defined as a sperm count below 20 million per milliliter semen.[accessedResource: MSH:D009845][accessDate: 10-05-2010]
CL:0000148
BTO:0000847
A pigment cell derived from the neural crest. Contains melanin-filled pigment granules, which gives a brown to black appearance.
A pigment cell derived from the neural crest. Contains melanin-filled pigment granules, which gives a brown to black appearance.[accessedResource: CL:0000148][accessDate: 10-05-2010]
melanophore[accessedResource: CL:0000148][accessDate: 10-05-2010]
An epidermal cell that produces melanin.[accessedResource: BTO:0000847][accessDate: 10-05-2010]
An epidermal cell that produces melanin.
melanophore
melanocyte
Tomasz Adamusiak
NCI Metathesaurus: C1406910
acute quadriplegic myopathy
James Malone
ZFS:0000043
juvenile days 45-89
James Malone
Discrete abnormal tissue masses that protrude into the lumen of the DIGESTIVE TRACT or the RESPIRATORY TRACT. Polyps can be spheroidal, hemispheroidal, or irregular mound-shaped structures attached to the MUCOUS MEMBRANE of the lumen wall either by a stalk, pedunculus, or by a broad base.[accessedResource: MSH:D011127][accessDate: 10-05-2010]
GeneRIF:12916705
James Malone
GeneRIF:12351556
DOID:3475
A usually exophytic mass attached to the underlying tissue by a broad base or a thin stalk. Polyps can be neoplastic or non-neoplastic. Neoplastic polyps usually represent proliferations of the epithelium, and are commonly seen in the gastrointestinal tract. Polyps of the gastrointestinal tract are often called adenomas, are associated with dysplasia, and may eventually transform into carcinomas. Non-neoplastic polyps may be inflammatory, degenerative, or the result of malformations. -- 2004
polyps
GeneRIF:15017003
MSH:D011127
Discrete abnormal tissue masses that protrude into the lumen of the DIGESTIVE TRACT or the RESPIRATORY TRACT. Polyps can be spheroidal, hemispheroidal, or irregular mound-shaped structures attached to the MUCOUS MEMBRANE of the lumen wall either by a stalk, pedunculus, or by a broad base.
GeneRIF:11932925
A usually exophytic mass attached to the underlying tissue by a broad base or a thin stalk. Polyps can be neoplastic or non-neoplastic. Neoplastic polyps usually represent proliferations of the epithelium, and are commonly seen in the gastrointestinal tract. Polyps of the gastrointestinal tract are often called adenomas, are associated with dysplasia, and may eventually transform into carcinomas. Non-neoplastic polyps may be inflammatory, degenerative, or the result of malformations.
polyps[accessedResource: DOID:3475][accessDate: 10-05-2010]
GeneRIF:12218179
GeneRIF:12970739
GeneRIF:12151354
NCIt:C3340
A usually exophytic mass attached to the underlying tissue by a broad base or a thin stalk. Polyps can be neoplastic or non-neoplastic. Neoplastic polyps usually represent proliferations of the epithelium, and are commonly seen in the gastrointestinal tract. Polyps of the gastrointestinal tract are often called adenomas, are associated with dysplasia, and may eventually transform into carcinomas. Non-neoplastic polyps may be inflammatory, degenerative, or the result of malformations.[accessedResource: NCIt:C3340][accessDate: 10-05-2010]
GeneRIF:15489648
polyp (morphologic abnormality)
GeneRIF:12807720
polyp (morphologic abnormality)[accessedResource: DOID:3475][accessDate: 10-05-2010]
GeneRIF:12855642
polyp
GeneRIF:12841871
One of the modified leaves comprising a calyx.
PO:0009031
MAT:0000355
GRO:0005655
James Malone
One of the modified leaves comprising a calyx.[accessedResource: BTO:0001547][accessDate: 10-05-2010]
GRO:0005655[accessedResource: BTO:0001547][accessDate: 10-05-2010]
sepal
BTO:0001547
MFO:0002260
NIFSTD:birnlex_1509
TAO:0000109
The most anterior region the brain including both the telencephalon and diencephalon.[accessedResource: ZFA:0000109][accessDate: 10-05-2010]
prosencephalon[accessedResource: ZFA:0000109][accessDate: 10-05-2010]
Organ component of neuraxis that has as its parts the telencephalon, diencephalon, lateral ventricles and third ventricle. Examples: There is only one forebrain.[accessedResource: FMAID:61992][accessDate: 10-05-2010]
James Malone
The most anterior region the brain including both the telencephalon and diencephalon.
XAO:0000011
The anterior of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain that includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and that especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions.[accessedResource: BTO:0000478][accessDate: 10-05-2010]
EMAPA:16895
Organ component of neuraxis that has as its parts the telencephalon, diencephalon, lateral ventricles and third ventricle. Examples: There is only one forebrain.
ZFA:0000109
MA:0000170
Tomasz Adamusiak
forebrain
SAEL:43
The most anterior region the brain including both the telencephalon and diencephalon. Kimmel et al, 1995.
FMAID:61992
The anterior of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain that includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and that especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions.
The most anterior region the brain including both the telencephalon and diencephalon. Kimmel et al, 1995.[accessedResource: TAO:0000109][accessDate: 10-05-2010]
prosencephalon
EHDAA:3470
MAT:0000105
BTO:0000478
GM12239
James Malone
Use PATO qualities , e.g. dead
true
The stage premortem or postmortem at which the sample was processed for extraction of biomaterials. e.g. alive or dead
obsolete_organism status
http://www.arabidopsis.org/servlets/TairObject?id=1005158620&type=germplasm
CS57596 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158620&type=germplasm
CS57596
James Malone
James Malone
A leukocyte with abundant granules in the cytoplasm.
A polymorphonuclear white blood cell with granule-containing cytoplasm.
A polymorphonuclear white blood cell with granule-containing cytoplasm.[accessedResource: BTO:0000539][accessDate: 10-05-2010]
granulocyte
CL:0000094
A leukocyte with abundant granules in the cytoplasm.[accessedResource: CL:0000094][accessDate: 10-05-2010]
BTO:0000539
panicle
BTO:0000628
GRO:0005317
A flower cluster with a definite arrangement.[accessedResource: BTO:0000628][accessDate: 10-05-2010]
inflorescence
James Malone
panicle[accessedResource: BTO:0000628][accessDate: 10-05-2010]
GRO:0005317[accessedResource: BTO:0000628][accessDate: 10-05-2010]
A flower cluster with a definite arrangement.
PO:0009049
GeneRIF:12355402
HMSN V (Hereditary Motor and Sensory Neuropathy Type V)[accessedResource: MSH:D015419][accessDate: 10-05-2010]
Spastic Paraplegia, X-Linked Recessive, Hereditary[accessedResource: MSH:D015419][accessDate: 10-05-2010]
Strumpell disease[accessedResource: SNOMEDCT:39912006][accessDate: 10-05-2010]
Hereditary sensory-motor neuropathy, type V[accessedResource: SNOMEDCT:76043009][accessDate: 10-05-2010]
GeneRIF:12161613
HMSN V
Hereditary Spastic Paraplegias[accessedResource: MSH:D015419][accessDate: 10-05-2010]
HSP - Hereditary spastic paraplegia
GeneRIF:15159500
GeneRIF:15858810
Spastic congenital paraplegia[accessedResource: SNOMEDCT:39912006][accessDate: 10-05-2010]
HSMN V[accessedResource: DOID:2476][accessDate: 10-05-2010]
HSP - Hereditary spastic paraplegia[accessedResource: SNOMEDCT:39912006][accessDate: 10-05-2010]
A group of inherited diseases that share similar phenotypes but are genetically diverse. Different genetic loci for autosomal recessive, autosomal dominant, and x-linked forms of hereditary spastic paraplegia have been identified. Clinically, patients present with slowly progressive distal limb weakness and lower extremity spasticity. Peripheral sensory neurons may be affected in the later stages of the disease. (J Neurol Neurosurg Psychiatry 1998 Jan;64(1):61-6; Curr Opin Neurol 1997 Aug;10(4):313-8)
HERED SPASTIC PARAPLEGIA[accessedResource: ICD9:334.1][accessDate: 10-05-2010]
Spastic Paraplegia, Autosomal Dominant, Hereditary
Hereditary motor-sensory neuropathy with pyramidal signs[accessedResource: SNOMEDCT:76043009][accessDate: 10-05-2010]
Spastic congenital paraplegia
Hypertrophic Motor-Sensory Neuropathy-Spastic Paraplegia[accessedResource: MSH:D015419][accessDate: 10-05-2010]
Strumpell-Lorrain disease
A group of inherited diseases that share similar phenotypes but are genetically diverse. Different genetic loci for autosomal recessive, autosomal dominant, and x-linked forms of hereditary spastic paraplegia have been identified. Clinically, patients present with slowly progressive distal limb weakness and lower extremity spasticity. Peripheral sensory neurons may be affected in the later stages of the disease. (J Neurol Neurosurg Psychiatry 1998 Jan;64(1):61-6; Curr Opin Neurol 1997 Aug;10(4):313-8)[accessedResource: MSH:D015419][accessDate: 10-05-2010]
Strumpell disease
Hereditary motor and sensory neuropathy type V
GeneRIF:15248095
Hypertrophic Motor-Sensory Neuropathy-Spastic Paraplegia
DOID:2476
HMSN Type V[accessedResource: MSH:D015419][accessDate: 10-05-2010]
Hereditary Spastic Paraplegias
Familial spastic paraplegia syndrome[accessedResource: SNOMEDCT:39912006][accessDate: 10-05-2010]
Hereditary sensory-motor neuropathy, type V (disorder)
GeneRIF:16026783
Hereditary Motor Sensory Neuropathy with Pyramidal Signs
HSMN V
Spastic Paraplegia, X-Linked Recessive, Hereditary
GeneRIF:15452312
Hereditary sensory-motor neuropathy, type V
SNOMEDCT:39912006
Strumpell-Lorrain disease[accessedResource: SNOMEDCT:39912006][accessDate: 10-05-2010]
X-Linked, Spastic Paraplegia, Hereditary[accessedResource: MSH:D015419][accessDate: 10-05-2010]
GeneRIF:12490534
Hereditary spastic paraplegia (disorder)
X-Linked, Spastic Paraplegia, Hereditary
GeneRIF:15667412
GeneRIF:11898127
hereditary spastic paraplegia
Autosomal Recessive Spastic Paraplegia, Hereditary
Hereditary, Spastic Paraplegia, Autosomal Dominant[accessedResource: MSH:D015419][accessDate: 10-05-2010]
GeneRIF:11704932
Hereditary spastic paraplegia (disorder)[accessedResource: DOID:2476][accessDate: 10-05-2010]
GeneRIF:15939438
Type V, HMSN
HMSN V (Hereditary Motor and Sensory Neuropathy Type V)
Autosomal Recessive Hereditary Spastic Paraplegia[accessedResource: MSH:D015419][accessDate: 10-05-2010]
MSH:D015419
Hereditary sensory-motor neuropathy, type V (disorder)[accessedResource: SNOMEDCT:76043009][accessDate: 10-05-2010]
Spastic paraplegia with hypertrophic sensory-motor neuropathy, type V[accessedResource: SNOMEDCT:76043009][accessDate: 10-05-2010]
Hereditary motor and sensory neuropathy type V[accessedResource: SNOMEDCT:76043009][accessDate: 10-05-2010]
ICD9:334.1
SNOMEDCT:76043009
Familial spastic paraplegia syndrome
HERED SPASTIC PARAPLEGIA
GeneRIF:12134148
Spastic paraplegia with hypertrophic sensory-motor neuropathy, type V
HMSN V[accessedResource: SNOMEDCT:76043009][accessDate: 10-05-2010]
James Malone
Mucoviscidosis
GeneRIF:15184199
Mucoviscidosis[accessedResource: SNOMEDCT:190905008][accessDate: 10-05-2010]
Cystic fibrosis NOS
GeneRIF:15684701
GeneRIF:11845300
GeneRIF:15367919
GeneRIF:14695120
GeneRIF:15489228
GeneRIF:12142723
GeneRIF:11823525
GeneRIF:12692180
GeneRIF:15007059
GeneRIF:15024729
GeneRIF:12660625
cystic fibrosis with meconium ileus[accessedResource: DOID:1485][accessDate: 10-05-2010]
GeneRIF:16236890
Cystic fibrosis without mention of meconium ileus[accessedResource: ICD9:277.00][accessDate: 10-05-2010]
GeneRIF:12919146
GeneRIF:16281647
GeneRIF:15025720
GeneRIF:12370389
GeneRIF:12948935
GeneRIF:12297838
Fibrocystic disease
GeneRIF:11877474
Cystic fibrosis (disorder)[accessedResource: SNOMEDCT:190905008][accessDate: 10-05-2010]
cystic fibrosis with pulmonary manifestations
GeneRIF:12820707
GeneRIF:15070876
GeneRIF:15463895
cystic fibrosis with other manifestations (disorder)[accessedResource: DOID:1485][accessDate: 10-05-2010]
GeneRIF:12579467
GeneRIF:11872746
GeneRIF:16267280
cystic fibrosis with pulmonary manifestations[accessedResource: DOID:1485][accessDate: 10-05-2010]
Cystic fibrosis without mention of meconium ileus
CYSTIC FIBROS W/O ILEUS[accessedResource: ICD9:277.00][accessDate: 10-05-2010]
GeneRIF:15385508
GeneRIF:11667971
cystic fibrosis with combined manifestations
CYSTIC FIBROS W/O ILEUS
GeneRIF:15611333
CF[accessedResource: SNOMEDCT:190905008][accessDate: 10-05-2010]
ICD9:277.0
GeneRIF:12142724
GeneRIF:16207846
GeneRIF:15274124
cystic fibrosis with pulmonary manifestations (disorder)[accessedResource: DOID:1485][accessDate: 10-05-2010]
GeneRIF:12732620
GeneRIF:15579374
A congenital metabolic disorder affecting the exocrine glands, inherited as an autosomal trait. The secretions of exocrine glands are abnormal, resulting in excessively viscid mucus production which causes obstruction of passageways (including pancreatic and bile ducts, intestines, and bronchi). The sweat sodium and chloride content are increased. Symptoms usually appear in childhood and include meconium ileus, poor growth despite good appetite, malabsorption and foul bulky stools, chronic bronchitis with cough, recurrent pneumonia, bronchiectasis, emphysema, clubbing of the fingers, and salt depletion in hot weather. -- 2003
cystic fibrosis with meconium ileus (disorder)[accessedResource: DOID:1485][accessDate: 10-05-2010]
cystic fibrosis with meconium ileus (disorder)
cystic fibrosis with other manifestations[accessedResource: DOID:1485][accessDate: 10-05-2010]
cystic fibrosis
GeneRIF:11988083
CF - Cystic fibrosis[accessedResource: SNOMEDCT:190905008][accessDate: 10-05-2010]
GeneRIF:12847263
GeneRIF:15537723
GeneRIF:16137181
GeneRIF:15463896
Cystic fibrosis NOS (disorder)[accessedResource: SNOMEDCT:190911006][accessDate: 10-05-2010]
NCIt:C2975
cystic fibrosis with other manifestations
GeneRIF:11956211
SNOMEDCT:190905008
cystic fibrosis with combined manifestations[accessedResource: DOID:1485][accessDate: 10-05-2010]
cystic fibrosis with gastrointestinal manifestations[accessedResource: DOID:1485][accessDate: 10-05-2010]
cystic fibrosis with gastrointestinal manifestations
GeneRIF:12220181
GeneRIF:11809765
Cystic fibrosis NOS (disorder)
GeneRIF:15490240
DOID:1485
GeneRIF:15336594
GeneRIF:15781764
GeneRIF:14699484
ICD9:277.00
GeneRIF:12070134
cystic fibrosis with other manifestations (disorder)
SNOMEDCT:190911006
Meconium obstruction of intestine in mucoviscidosis
A congenital metabolic disorder affecting the exocrine glands, inherited as an autosomal trait. The secretions of exocrine glands are abnormal, resulting in excessively viscid mucus production which causes obstruction of passageways (including pancreatic and bile ducts, intestines, and bronchi). The sweat sodium and chloride content are increased. Symptoms usually appear in childhood and include meconium ileus, poor growth despite good appetite, malabsorption and foul bulky stools, chronic bronchitis with cough, recurrent pneumonia, bronchiectasis, emphysema, clubbing of the fingers, and salt depletion in hot weather.
GeneRIF:15107292
James Malone
GeneRIF:15638824
GeneRIF:14685937
Cystic fibrosis (disorder)
GeneRIF:15246975
GeneRIF:11984593
GeneRIF:12151438
GeneRIF:15025858
Meconium ileus in cystic fibrosis (disorder)
Meconium obstruction of intestine in mucoviscidosis[accessedResource: DOID:1485][accessDate: 10-05-2010]
GeneRIF:12000722
GeneRIF:15738290
cystic fibrosis with meconium ileus
GeneRIF:15964250
GeneRIF:15533353
CF - Cystic fibrosis
CF
Meconium ileus in cystic fibrosis (disorder)[accessedResource: DOID:1485][accessDate: 10-05-2010]
GeneRIF:15463893
GeneRIF:12547728
A congenital metabolic disorder affecting the exocrine glands, inherited as an autosomal trait. The secretions of exocrine glands are abnormal, resulting in excessively viscid mucus production which causes obstruction of passageways (including pancreatic and bile ducts, intestines, and bronchi). The sweat sodium and chloride content are increased. Symptoms usually appear in childhood and include meconium ileus, poor growth despite good appetite, malabsorption and foul bulky stools, chronic bronchitis with cough, recurrent pneumonia, bronchiectasis, emphysema, clubbing of the fingers, and salt depletion in hot weather.[accessedResource: NCIt:C2975][accessDate: 10-05-2010]
Fibrocystic disease[accessedResource: SNOMEDCT:190905008][accessDate: 10-05-2010]
Cystic fibrosis NOS[accessedResource: SNOMEDCT:190911006][accessDate: 10-05-2010]
cystic fibrosis with pulmonary manifestations (disorder)
GeneRIF:12026214
GeneRIF:15964894
BTO:0001639
James Malone
PO:0000055
Any small part of the embryo or adult metazoon more or less resembling the bud of a plant and presumed to have potential for growth and differentiation.[accessedResource: BTO:0001639][accessDate: 10-05-2010]
MAT:0000229
bud
Any small part of the embryo or adult metazoon more or less resembling the bud of a plant and presumed to have potential for growth and differentiation.
James Malone
Tumour of urinary bladder[accessedResource: SNOMEDCT:126885006][accessDate: 10-05-2010]
GeneRIF:12672029
Cancer of the Bladder
GeneRIF:15643502
tumor of the bladder
A benign or malignant, primary or metastatic neoplasm of the bladder. - 2003[accessedResource: NCIt:C2901][accessDate: 10-05-2010]
Urinary Bladder Tumors[accessedResource: NCIt:C2901][accessDate: 10-05-2010]
URINARY BLADDER NEOPL
Neoplasm of Urinary Bladder
neoplasm of bladder (disorder)[accessedResource: DOID:5428][accessDate: 10-05-2010]
GeneRIF:12926071
Tumor of the Bladder[accessedResource: NCIt:C2901][accessDate: 10-05-2010]
Neoplasm of the Urinary Bladder[accessedResource: NCIt:C2901][accessDate: 10-05-2010]
Bladder Cancers[accessedResource: MSH:D001749][accessDate: 10-05-2010]
GeneRIF:15541380
bladder tumor
DOID:5428
NGB - New growth of bladder
Neoplasm of Bladder[accessedResource: NCIt:C2901][accessDate: 10-05-2010]
GeneRIF:15122326
Tumor of the Urinary Bladder
Tumors or cancer of the URINARY BLADDER.[accessedResource: MSH:D001749][accessDate: 10-05-2010]
NEOPL BLADDER[accessedResource: MSH:D001749][accessDate: 10-05-2010]
MSH:D001749
Bladder Cancers
URINARY BLADDER NEOPL[accessedResource: MSH:D001749][accessDate: 10-05-2010]
GeneRIF:11888683
GeneRIF:12202941
GeneRIF:12783123
Neoplasm, Urinary Bladder[accessedResource: MSH:D001749][accessDate: 10-05-2010]
Neoplasm of the Bladder[accessedResource: NCIt:C2901][accessDate: 10-05-2010]
Urinary Bladder Cancer[accessedResource: MSH:D001749][accessDate: 10-05-2010]
SNOMEDCT:126885006
Urinary Bladder Tumors
Neoplasm of the Urinary Bladder
NEOPL BLADDER
A benign or malignant, primary or metastatic neoplasm of the bladder. - 2003
Neoplasm, Bladder
Neoplasm of the Bladder
GeneRIF:15273729
Bladder Tumors
Tumor of Bladder
Cancer of Bladder[accessedResource: MSH:D001749][accessDate: 10-05-2010]
NCIt:C2901
Bladder Cancer[accessedResource: MSH:D001749][accessDate: 10-05-2010]
Urinary Bladder Neoplasms[accessedResource: NCIt:C2901][accessDate: 10-05-2010]
Neoplasm, Urinary Bladder
Tumors or cancer of the URINARY BLADDER.
GeneRIF:15215162
Neoplasm of bladder (disorder)
Neoplasm of Bladder
Urinary Bladder Tumor
GeneRIF:12853839
Bladder Tumors[accessedResource: NCIt:C2901][accessDate: 10-05-2010]
Bladder Cancer
Bladder Neoplasms[accessedResource: MSH:D001749][accessDate: 10-05-2010]
Tumor of urinary bladder
GeneRIF:12115506
Tumor of Urinary Bladder[accessedResource: NCIt:C2901][accessDate: 10-05-2010]
Urinary Bladder Cancer
Urinary Bladder Tumor[accessedResource: NCIt:C2901][accessDate: 10-05-2010]
Neoplasms, Bladder
Cancer of Bladder
Tumour of urinary bladder
Neoplasm of Urinary Bladder[accessedResource: NCIt:C2901][accessDate: 10-05-2010]
GeneRIF:12820330
Urinary Bladder Neoplasms
NGB - New growth of bladder[accessedResource: DOID:5428][accessDate: 10-05-2010]
Cancer of the Bladder[accessedResource: MSH:D001749][accessDate: 10-05-2010]
Bladder Neoplasm[accessedResource: NCIt:C2901][accessDate: 10-05-2010]
Tumor of the Urinary Bladder[accessedResource: NCIt:C2901][accessDate: 10-05-2010]
Tumor of Bladder[accessedResource: NCIt:C2901][accessDate: 10-05-2010]
http://www.arabidopsis.org/servlets/TairObject?id=1005158932&type=germplasm
CS57908 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158932&type=germplasm
CS57908
James Malone
Adenocarcinoma of Kidney
kidney carcinoma
James Malone
Adenocarcinoma of the Kidney
RCC
kidney cancer
A carcinoma arising from the renal parenchyma. The incidence of renal cell carcinoma has increased by 35% from 1973 to 1991. There is a strong correlation between cigarette smoking and the development of renal cell carcinoma. The clinical presentation includes : hematuria, flank pain and a palpable lumbar mass. A high percentage of renal cell carcinomas are diagnosed when an ultrasound is performed for other purposes. Diagnostic procedures include: ultra sound, intravenous pyelography and computed tomography (CT). Radical nephrectomy is the standard intervention procedure. Renal cell carcinoma is generally considered to be resistant to radiation treatment and chemotherapy.
Kidney Adenocarcinoma[accessedResource: NCIt:C9385][accessDate: 10-05-2010]
Renal Cell Adenocarcinoma[accessedResource: NCIt:C9385][accessDate: 10-05-2010]
renal carcinoma
Renal Cell Carcinoma
Renal Cell Carcinoma, Stage Unspecified[accessedResource: NCIt:C9385][accessDate: 10-05-2010]
Renal Cell Carcinoma, Stage Unspecified
Renal Cell Carcinoma[accessedResource: NCIt:C9385][accessDate: 10-05-2010]
RCC[accessedResource: NCIt:C9385][accessDate: 10-05-2010]
NCIt:C9385
Adenocarcinoma of the Kidney[accessedResource: NCIt:C9385][accessDate: 10-05-2010]
renal cancer
Renal Cell Cancer
A carcinoma arising from the renal parenchyma. The incidence of renal cell carcinoma has increased by 35% from 1973 to 1991. There is a strong correlation between cigarette smoking and the development of renal cell carcinoma. The clinical presentation includes : hematuria, flank pain and a palpable lumbar mass. A high percentage of renal cell carcinomas are diagnosed when an ultrasound is performed for other purposes. Diagnostic procedures include: ultra sound, intravenous pyelography and computed tomography (CT). Radical nephrectomy is the standard intervention procedure. Renal cell carcinoma is generally considered to be resistant to radiation treatment and chemotherapy.[accessedResource: NCIt:C9385][accessDate: 10-05-2010]
Adenocarcinoma of Kidney[accessedResource: NCIt:C9385][accessDate: 10-05-2010]
Renal Cell Cancer[accessedResource: NCIt:C9385][accessDate: 10-05-2010]
Kidney Adenocarcinoma
Renal Cell Adenocarcinoma
http://jaxmice.jax.org/strain/009273.html
ILSXISS52/TejJ
Tomasz Adamusiak
James Malone
1A2
Ele Holloway
http://jaxmice.jax.org/strain/009282.html
ILSXISS90/TejJ
Tomasz Adamusiak
GeneRIF:15232358
Spastic colon
Functional bowel disease[accessedResource: SNOMEDCT:10743008][accessDate: 10-05-2010]
James Malone
GeneRIF:11877320
Adaptive colitis
Colitides, Mucous[accessedResource: MSH:D043183][accessDate: 10-05-2010]
Spastic colon[accessedResource: SNOMEDCT:10743008][accessDate: 10-05-2010]
Irritable Bowel Syndromes[accessedResource: MSH:D043183][accessDate: 10-05-2010]
Irritable colon (disorder)
Irritable bowel - IBS
IC - Irritable colon[accessedResource: SNOMEDCT:10743008][accessDate: 10-05-2010]
Irritable colon syndrome[accessedResource: SNOMEDCT:10743008][accessDate: 10-05-2010]
Mucous colitis
Colitides, Mucous
GeneRIF:15509739
GeneRIF:15188158
A disorder with chronic or recurrent colonic symptoms without a clearcut etiology. This condition is characterized by chronic or recurrent ABDOMINAL PAIN, bloating, MUCUS in FECES, and an erratic disturbance of DEFECATION.
irritable bowel syndrome
Mucous colitis[accessedResource: SNOMEDCT:10743008][accessDate: 10-05-2010]
Irritable colon
Colon spasm[accessedResource: SNOMEDCT:10743008][accessDate: 10-05-2010]
Membranous colitis
DOID:9778
Irritable bowel[accessedResource: SNOMEDCT:10743008][accessDate: 10-05-2010]
Syndromes, Irritable Bowel
Irritable colon (disorder)[accessedResource: SNOMEDCT:10743008][accessDate: 10-05-2010]
Irritable colon - Irritable bowel syndrome[accessedResource: DOID:9778][accessDate: 10-05-2010]
[X]Psychogenic IBS[accessedResource: SNOMEDCT:10743008][accessDate: 10-05-2010]
Irritable bowel - IBS[accessedResource: DOID:9778][accessDate: 10-05-2010]
Irritable colon syndrome
IBS
Psychogenic IBS[accessedResource: DOID:9778][accessDate: 10-05-2010]
IBS - Irritable bowel syndrome[accessedResource: SNOMEDCT:10743008][accessDate: 10-05-2010]
[X]Psychogenic IBS
IBD
IBS - Irritable bowel syndrome
A disorder with chronic or recurrent colonic symptoms without a clearcut etiology. This condition is characterized by chronic or recurrent ABDOMINAL PAIN, bloating, MUCUS in FECES, and an erratic disturbance of DEFECATION.[accessedResource: MSH:D043183][accessDate: 10-05-2010]
ICD9:564.1
Functional bowel disease
Psychogenic IBS
Nervous colitis
Irritable colon[accessedResource: DOID:9778][accessDate: 10-05-2010]
IC - Irritable colon
IBS[accessedResource: DOID:9778][accessDate: 10-05-2010]
Adaptive colitis[accessedResource: SNOMEDCT:10743008][accessDate: 10-05-2010]
SNOMEDCT:10743008
GeneRIF:15633223
Spastic colitis[accessedResource: SNOMEDCT:10743008][accessDate: 10-05-2010]
Nervous colitis[accessedResource: SNOMEDCT:10743008][accessDate: 10-05-2010]
Irritable bowel
Irritable colon - Irritable bowel syndrome
Membranous colitis[accessedResource: SNOMEDCT:10743008][accessDate: 10-05-2010]
MSH:D043183
Spastic colitis
Colon spasm
IBD[accessedResource: DOID:9778][accessDate: 10-05-2010]
A neoplastic proliferation of the epithelial cells that line the acini and the ducts of the prostate gland. The neoplastic epithelial cells are confined within the acini and the ducts and they do not invade the surrounding prostatic stroma. Morphologically, it is classified as low or high grade.[accessedResource: NCIt:C4064][accessDate: 10-05-2010]
Prostatic Intraepithelial Neoplasia
PIN[accessedResource: NCIt:C4064][accessDate: 10-05-2010]
PIN - Prostatic Intraepithelial Neoplasia
prostatic intraepithelial neoplasia[accessedResource: MP:0009219][accessDate: 10-05-2010]
MP:0009219
NCIt:C4064
prostate intraepithelial neoplasia
PIN - Prostatic Intraepithelial Neoplasia[accessedResource: NCIt:C4064][accessDate: 10-05-2010]
PIN
Ele Holloway
noninvasive prostate duct lesions that affect smaller caliber ducts[accessedResource: MP:0009219][accessDate: 10-05-2010]
noninvasive prostate duct lesions that affect smaller caliber ducts
A neoplastic proliferation of the epithelial cells that line the acini and the ducts of the prostate gland. The neoplastic epithelial cells are confined within the acini and the ducts and they do not invade the surrounding prostatic stroma. Morphologically, it is classified as low or high grade.
Tomasz Adamusiak
GM11882
James Malone
PO:0009088
The outer layer of a seed that is developed from the integuments of the ovule; the testa.[accessedResource: BTO:0001227][accessDate: 10-05-2010]
tegmen[accessedResource: BTO:0001227][accessDate: 10-05-2010]
GRO:0005359[accessedResource: BTO:0001227][accessDate: 10-05-2010]
GRO:0005359
MAT:0000228
The outer layer of a seed that is developed from the integuments of the ovule; the testa.
testa
BTO:0001227
James Malone
seed coat
testa[accessedResource: BTO:0001227][accessDate: 10-05-2010]
tegmen
NCI Metathesaurus: C0085491
Aeromonas hydrophila infection is a bacterial disease caused by infection from the Aeromonas hydrophila bacteria.
Aeromonas hydrophila infection
James Malone
MO_914
imprinting design
Tomasz Adamusiak
CHEBI:28368
http://www.ebi.ac.uk/efo/EFO_0001583
novobiocin
true
ug/ml
microgram per milliliter
acute hypotension
James Malone
Ele Holloway
green plants
http://www.ebi.ac.uk/efo/EFO_0002633
Viridiplantae are a clade comprising the green algae and land plants.
Viridiplantae
James Malone
BTO:0001464
wing imaginal disc
The entire dorsal mesothoracic disc (wing, notal, and pleural parts), in the larval stage of Drosophila.
wing imaginal disc[accessedResource: BTO:0001464][accessDate: 10-05-2010]
The entire dorsal mesothoracic disc (wing, notal, and pleural parts), in the larval stage of Drosophila.[accessedResource: BTO:0001464][accessDate: 10-05-2010]
wing disc
James Malone
Synonym with mouth, use mouth instead see: EFO_0000825
Head and Neck, Buccal Cavity
Buccal Cavity
Oral
Cavity of mouth
Oral[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
The cavity located at the upper end of the alimentary canal, behind the teeth and gums that is bounded on the outside by the lips, above by the hard and soft palates and below by the tongue.
FMA:20292
NCIt:C12421
Orally
Head and Neck, Buccal Cavity[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
Mouth[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
obsolete_oral cavity
Orally[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
true
Oral cavity[accessedResource: FMA:20292][accessDate: 10-05-2010]
1.8
James Malone
Cavity of mouth[accessedResource: FMA:20292][accessDate: 10-05-2010]
Mouth
Oral cavity
Buccal Cavity[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
The cavity located at the upper end of the alimentary canal, behind the teeth and gums that is bounded on the outside by the lips, above by the hard and soft palates and below by the tongue.[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
Insulin-Producing Neoplasm of Islet Cells
James Malone
Insulin-Producing Tumor of the Islet Cells
A benign tumor of the PANCREATIC BETA CELLS. Insulinoma secretes excess INSULIN resulting in HYPOGLYCEMIA.
Insulinoma NOS (morphologic abnormality)
Pancreatic Beta Cell Tumor[accessedResource: NCIt:C3140][accessDate: 10-05-2010]
DOID:3903
Insulin-Producing tumor of Islet cells[accessedResource: DOID:3903][accessDate: 10-05-2010]
Pancreatic Beta Cell Tumor
Beta cell adenoma[accessedResource: SNOMEDCT:25324008][accessDate: 10-05-2010]
GeneRIF:14602773
Insulinomas
A usually benign, well circumscribed neoplasm arising from the beta cells of the pancreas. Patients exhibit symptoms related to hypoglycemia due to inappropriate secretion of insulin.[accessedResource: NCIt:C3140][accessDate: 10-05-2010]
SNOMEDCT:134154009
Beta Cell Neoplasm of Pancreas[accessedResource: NCIt:C3140][accessDate: 10-05-2010]
[M]Insulinoma NOS[accessedResource: SNOMEDCT:134154009][accessDate: 10-05-2010]
GeneRIF:14656003
Insulinomas[accessedResource: MSH:D007340][accessDate: 10-05-2010]
GeneRIF:12475221
Insulinoma (morphologic abnormality)
Beta Cell Neoplasm of Pancreas
A benign tumor of the PANCREATIC BETA CELLS. Insulinoma secretes excess INSULIN resulting in HYPOGLYCEMIA.[accessedResource: MSH:D007340][accessDate: 10-05-2010]
Insulin-Producing Neoplasm of the Islet Cells
Insulomas[accessedResource: MSH:D007340][accessDate: 10-05-2010]
Insulin-Producing Neoplasm of the Islet Cells[accessedResource: NCIt:C3140][accessDate: 10-05-2010]
[M]Insulinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:134154009][accessDate: 10-05-2010]
Insulin-Producing Islet Cell Tumor[accessedResource: NCIt:C3140][accessDate: 10-05-2010]
[M]Insulinoma NOS
Beta Cell Tumor of Pancreas[accessedResource: NCIt:C3140][accessDate: 10-05-2010]
GeneRIF:11986368
Insulinoma, NOS[accessedResource: SNOMEDCT:25324008][accessDate: 10-05-2010]
Pancreatic Insulin Producing Neoplasm
Insulin-Producing Islet Cell Neoplasm
Insulin-Producing Tumor of the Islet Cells[accessedResource: NCIt:C3140][accessDate: 10-05-2010]
Beta Cell Tumor of Pancreas
Insulin-Producing Islet Cell Tumor
Insulinoma (disorder)[accessedResource: DOID:3903][accessDate: 10-05-2010]
Insulinoma (disorder)
Pancreatic Insulin Producing Neoplasm[accessedResource: NCIt:C3140][accessDate: 10-05-2010]
insulinoma
Insulin-Producing Islet Cell Neoplasm[accessedResource: NCIt:C3140][accessDate: 10-05-2010]
Insulomas
[M]Insulinoma NOS (morphologic abnormality)
beta Cell Tumor
Beta Cell Neoplasm
Insuloma[accessedResource: MSH:D007340][accessDate: 10-05-2010]
Beta Cell Tumor of the Pancreas[accessedResource: NCIt:C3140][accessDate: 10-05-2010]
Insulin-Producing Tumor of Islet Cells
beta-Cell Adenomas
A usually benign, well circumscribed neoplasm arising from the beta cells of the pancreas. Patients exhibit symptoms related to hypoglycemia due to inappropriate secretion of insulin.
NCIt:C3140
Beta Cell Neoplasm of the Pancreas[accessedResource: NCIt:C3140][accessDate: 10-05-2010]
beta-Cell Tumors[accessedResource: MSH:D007340][accessDate: 10-05-2010]
Beta Cell Neoplasm[accessedResource: NCIt:C3140][accessDate: 10-05-2010]
Insulinoma NOS (morphologic abnormality)[accessedResource: DOID:3903][accessDate: 10-05-2010]
GeneRIF:12688630
Insulinoma, NOS
Beta Cell Tumor of the Pancreas
SNOMEDCT:25324008
Pancreatic Insulin Producing Tumor[accessedResource: NCIt:C3140][accessDate: 10-05-2010]
Tumors, beta-Cell
Pancreatic Insulin Producing Tumor
Insulin-Producing Neoplasm of Islet Cells[accessedResource: NCIt:C3140][accessDate: 10-05-2010]
Beta Cell Neoplasm of the Pancreas
Insuloma
MSH:D007340
beta-Cell Adenomas[accessedResource: MSH:D007340][accessDate: 10-05-2010]
SNOMEDCT:302822000
beta Cell Tumor[accessedResource: MSH:D007340][accessDate: 10-05-2010]
Insulinoma (morphologic abnormality)[accessedResource: DOID:3903][accessDate: 10-05-2010]
GeneRIF:15060136
GeneRIF:12417605
beta-Cell Adenoma
RGD:1358153
Copenhagen
James Malone
dopaminergic antagonists
A drug that binds to but does not activate dopamine receptors, thereby blocking the actions of dopamine or exogenous agonists.
dopamine receptor antagonist
James Malone
http://www.ebi.ac.uk/efo/EFO_0001879
CHEBI:48561
dopamine blocker
dopaminergic antagonist
dopamine antagonist
large intestine
hindgut[accessedResource: MAT:0000046][accessDate: 10-05-2010]
MAT:0000046
Large bowel
The hindgut of adult mosquito consists of pyloric chamber, anterior intestine, rectum, anal canal and anus.[accessedResource: TGMA:0001020][accessDate: 10-05-2010]
The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates.[accessedResource: ZFA:0000706][accessDate: 10-05-2010]
EMAPA:19252
posterior intestine[accessedResource: MAT:0000046][accessDate: 10-05-2010]
XAO:0000131
hindgut
The hindgut of adult mosquito consists of pyloric chamber, anterior intestine, rectum, anal canal and anus.
The more terminal division of the vertebrate intestine that is wider and shorter than the small intestine, typically divided into cecum, colon, and rectum, and concerned especially with the resorption of water and the formation of feces.[accessedResource: BTO:0000706][accessDate: 10-05-2010]
BTO:0000706
ZFA:0000706
SAEL:58
posterior intestine
MA:0000333
EV:0100077
The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates.
James Malone
The more terminal division of the vertebrate intestine that is wider and shorter than the small intestine, typically divided into cecum, colon, and rectum, and concerned especially with the resorption of water and the formation of feces.
Organ with organ cavity which is continuous proximally with the small intestine and distally with the anal canal. Examples: There is only large intestine.
Organ with organ cavity which is continuous proximally with the small intestine and distally with the anal canal. Examples: There is only large intestine.[accessedResource: FMAID:7201][accessDate: 10-05-2010]
Large bowel[accessedResource: FMAID:7201][accessDate: 10-05-2010]
FMAID:7201
TGMA:0001020
true
UO:0000045
http://www.ebi.ac.uk/efo/EFO_0001677
A unit which is one of a particular measure to which all measures of that type can be related.
A base unit is a unit which is used to measure a paticular type which is independent from all other base units and from which all measures of that type can be derived, for example, a length base unit of the meter. This is akin to the SI base unit system.
base unit
James Malone
MO_189
Is an information entity about the material's (i.e., the patient's) medical record as background information relevant to the experiment.
clinical history
Tomasz Adamusiak
Jie Zheng
James Malone
A human embryonic stem cell line
BG03
HapMap haplotype mapping
http://en.wikipedia.org/wiki/Brassica_oleracea
http://www.ebi.ac.uk/efo/EFO_0002635
Brassica oleracea, commonly called Wild Mustard, is a species of Brassica native to coastal southern and western Europe, where its tolerance of salt and lime and its intolerance of competition from other plants typically restrict its natural occurrence to limestone sea cliffs, like the chalk cliffs on both sides of the English Channel.
Brassica oleracea
James Malone
SNOMEDCT:408647009
stomach adenocarcinoma
An adenocarcinoma arising from the stomach glandular epithelium. Gastric adenocarcinoma is primarily a disease of older individuals, most commonly develops after a long period of atrophic gastritis and is strongly associated with Helicobacter Pylori infection. The lack of early symptoms often delays the diagnosis of gastric cancer. The majority of patients present with advanced tumors which have poor rates of curability. Microscopically, two important histologic types of gastric adenocarcinoma are recognized: the intestinal and diffuse type. The overall prognosis of gastric adenocarcinomas is poor, even in patients who receive a "curative" resection (adapted from Sternberg's Surgical Pathology, 3rd ed., 1999).
Adenocarcinoma of the Stomach[accessedResource: NCIt:C4004][accessDate: 10-05-2010]
Adenocarcinoma of stomach (disorder)[accessedResource: SNOMEDCT:408647009][accessDate: 10-05-2010]
curative
NCIt:C4004
Adenocarcinoma of the Stomach
An adenocarcinoma arising from the stomach glandular epithelium. Gastric adenocarcinoma is primarily a disease of older individuals, most commonly develops after a long period of atrophic gastritis and is strongly associated with Helicobacter Pylori infection. The lack of early symptoms often delays the diagnosis of gastric cancer. The majority of patients present with advanced tumors which have poor rates of curability. Microscopically, two important histologic types of gastric adenocarcinoma are recognized: the intestinal and diffuse type. The overall prognosis of gastric adenocarcinomas is poor, even in patients who receive a "curative" resection (adapted from Sternberg's Surgical Pathology, 3rd ed., 1999).[accessedResource: NCIt:C4004][accessDate: 10-05-2010]
stomach adenocarcinoma[accessedResource: DOID:3717][accessDate: 10-05-2010]
adenocarcinoma of stomach (disorder)
gastric adenocarcinoma
DOID:3717
James Malone
Adenocarcinoma of Stomach
Adenocarcinoma of Stomach[accessedResource: NCIt:C4004][accessDate: 10-05-2010]
HMT3522S1
James Malone
GM12056
James Malone
FBbt:00000210
Asn/A antEndo
Asn/A antEndo[accessedResource: FBbt:00000210][accessDate: 10-05-2010]
anterior endoderm anlage
James Malone
James Malone
SUM159PT
NCIH508
James Malone
Ele Holloway
MAT:0000222
primary root[accessedResource: MAT:0000222][accessDate: 10-05-2010]
The main root of a plant, usually stouter than the lateral roots and growing straight downward from the stem.
The main root of a plant, usually stouter than the lateral roots and growing straight downward from the stem.[accessedResource: BTO:0002615][accessDate: 10-05-2010]
BTO:0002615
James Malone
ZEA:0015061
primary root
taproot
HP:0001952
abnormal glucose tolerance
Tomasz Adamusiak
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001540
InChIKey=VWUXBMIQPBEWFH-LQKBAPIOBA
[H][C@]12CC[C@]3(C)[C@@H](O)CC[C@@]3([H])C1[C@H](CCCCCCCCCS(=O)CCCC(F)(F)C(F)(F)F)Cc4cc(O)ccc24
C32H47F5O3S
James Malone
CHEBI:31638
A 3-hydroxy steroid that has formula C32H47F5O3S.
7alpha-{9-[(4,4,5,5,5-pentafluoropentyl)sulfinyl]nonyl}estra-1(10),2,4-triene-3,17beta-diol
InChI=1/C32H47F5O3S/c1-30-17-15-26-25-12-11-24(38)21-23(25)20-22(29(26)27(30)13-14-28(30)39)10-7-5-3-2-4-6-8-18-41(40)19-9-16-31(33,34)32(35,36)37/h11-12,21-22,26-29,38-39H,2-10,13-20H2,1H3/t22-,26-,27+,28+,29?,30+,41?/m1/s1
fulvestrant
MAT:0000490
medial meniscus
Medial is a geometric modifier describing something which is pertaining to, in or toward the middle, for example medial meniscus.
medial
James Malone
ZFS:0000017
gastrula 50%-epiboly
James Malone
SKGT4
James Malone
PO:0004525
MAT:0000365
wood parenchyma
OntologyMappingImporter following MAT:0000365
James Malone
SUDHL16
James Malone
Ele Holloway
A human embryonal carcinoma (EC) stem cell line used as a model system for the study of neuronal differentiation
NTera2
YCC10
James Malone
Ele Holloway
The most important structure of the insect's excretory organ, which may comprise cystiform or labyrinthine highly versatile tubules having their outlet into the initial section of the rectum.[accessedResource: FBbt:00005786][accessDate: 10-05-2010]
Any of a group of long blind vessels opening into the posterior part of the alimentary canal in most insects and some other arthropods and functioning primarily as excretory organs.[accessedResource: BTO:0000810][accessDate: 10-05-2010]
James Malone
FBbt:00005786
There are five Malpighian tubules that are attached to the alimentary canal posteriorly.[accessedResource: TGMA:0001038][accessDate: 10-05-2010]
Malpighian tubule
MAT:0000123
The most important structure of the insect's excretory organ, which may comprise cystiform or labyrinthine highly versatile tubules having their outlet into the initial section of the rectum.
There are five Malpighian tubules that are attached to the alimentary canal posteriorly.
FBbt:00005725
TGMA:0001038
BTO:0000810
TADS:0000163
malphigian tube
malphigian tube[accessedResource: BTO:0000810][accessDate: 10-05-2010]
Any of a group of long blind vessels opening into the posterior part of the alimentary canal in most insects and some other arthropods and functioning primarily as excretory organs.
lung cancer cell line
Ventral tegmental nucleus of Tsai
James Malone
Ventral tegmental nucleus of Tsai[accessedResource: FMA:72438][accessDate: 10-05-2010]
Ventral tegmental area of Tsai
Ventral tegmental nucleus (Tsai)
FMA:72438
Ventral tegmental area of Tsai[accessedResource: FMA:72438][accessDate: 10-05-2010]
ventral tegmental
Ventral tegmental nucleus (Tsai)[accessedResource: FMA:72438][accessDate: 10-05-2010]
ventral tegmental area
molecular oxygen
dioxygene
dioxygen
InChIKey=MYMOFIZGZYHOMD-UHFFFAOYAM
http://www.ebi.ac.uk/efo/EFO_0002675
O=O
Disauerstoff
InChI=1/O2/c1-2
oxygen
CHEBI:15379
OXYGEN MOLECULE
O2
A homoatomic molecule that has formula O2.
O(2)
mutagenos
An agent that increases the frequency of spontanenous mutation, usually by interacting directly with DNA and causing it damage, including base substitution.
CHEBI:25435
mutagenes
James Malone
mutagene
mutageno
http://www.ebi.ac.uk/efo/EFO_0001828
mutagen
mutagenic agent
mutagens
NCIH1930
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158827&type=germplasm
CS57803 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158827&type=germplasm
CS57803
James Malone
time before disease progression
James Malone
chronic myeloproliferative disorder
Tomasz Adamusiak
James Malone
RGD:737932
Lewis
James Malone
Whites[accessedResource: NCIt:C41261][accessDate: 10-05-2010]
White[accessedResource: NCIt:C41261][accessDate: 10-05-2010]
Caucasian
Whites
Caucasoid[accessedResource: NCIt:C41261][accessDate: 10-05-2010]
NCIt:C41261
Denotes person with European, Middle Eastern, or North African ancestral origin who identifies, or is identified, as White.
White
Jie Zheng
Denotes person with European, Middle Eastern, or North African ancestral origin who identifies, or is identified, as White.[accessedResource: NCIt:C41261][accessDate: 10-05-2010]
Caucasians[accessedResource: NCIt:C41261][accessDate: 10-05-2010]
Occidental
Tomasz Adamusiak
Caucasoid
Caucasians
Occidental[accessedResource: NCIt:C41261][accessDate: 10-05-2010]
developmental stage
puberty
Jie Zheng
A developmental stage is an information entity about some identifiable period in an organism's life cycle e.g. puberty
Tomasz Adamusiak
James Malone
true
MO_878
FBbt:00005606
embryonic foregut
James Malone
TERV-ST
James Malone
1.8
true
obsolete_MDAMB-157
James Malone
duplicate of EFO_0001206
time unit
A base unit which is a standard measure of the dimension in which events occur in sequence.
Tomasz Adamusiak
MO_103
MO_166
James Malone
http://www.ebi.ac.uk/efo/EFO_0001680
Jie Zheng
A time unit is a base unit which is a standard measure of the dimension in which events occur in sequence.
true
James Malone
Natural Language Generator 8th April 2010
A Jurkat is a cell line.
A Jurkat is all of the following: something that is bearer of a T cell acute lymphoblastic leukemia, something
that derives from a homo sapiens, and something that derives from a T cell.
JURKAT cell[accessedResource: BTO:0000661][accessDate: 10-05-2010]
Human T cell leukemia, established from the peripheral blood of a 14-year-old boy with acute lymphoblastic leukemia (ALL) at first relapse in 1976; often this cell line is called "JM (JURKAT and JM are derived from the same patient and are sister clones), occasionally JM may be a subclone with somewhat divergent features.[accessedResource: BTO:0000661][accessDate: 10-05-2010]
JM cell[accessedResource: BTO:0000661][accessDate: 10-05-2010]
JURKAT cell
Jurkat
Ele Holloway
JM cell
JM
BTO:0000661
Human T cell leukemia, established from the peripheral blood of a 14-year-old boy with acute lymphoblastic leukemia (ALL) at first relapse in 1976; often this cell line is called "JM (JURKAT and JM are derived from the same patient and are sister clones), occasionally JM may be a subclone with somewhat divergent features.
SKOV3
James Malone
Ele Holloway
InChI=1/C16H15ClN4O2/c1-19-12(8-7-10-5-4-6-11(17)9-10)18-14-13(19)15(22)21(3)16(23)20(14)2/h4-9H,1-3H3/b8-7+
8-(3-chlorostyryl) caffeine
CSC
C16H15ClN4O2
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0002490
8-[(E)-2-(3-chlorophenyl)ethenyl]-1,3,7-trimethyl-3,7-dihydro-1H-purine-2,6-dione
CHEBI:53115
InChIKey=WBWFIUAVMCNYPG-BQYQJAHWBU
James Malone
Caffeine substituted at its 8-position by an (E)-3-chlorostyryl group.
Cn1c(\\C=C\\c2cccc(Cl)c2)nc2n(C)c(=O)n(C)c(=O)c12
8-CSC
1,3,7-trimethyl-8-(3-chlorostyryl)xanthine
MO_882
submitter
Tomasz Adamusiak
Parietal region
Parietal lobe is the one of five lobes of the cerebral hemisphere which occupies the dorsal-posterior portion of the hemisphere. It is bounded by the central sulcus on its anterior border and and by the longitudinal cerebral fissure on its medial border. Posteriorly it shares an arbitrary border with the occipital lobe.[accessedResource: FMAID:61826][accessDate: 10-05-2010]
EV:0100166
MAT:0000506
Parietal lobe is the one of five lobes of the cerebral hemisphere which occupies the dorsal-posterior portion of the hemisphere. It is bounded by the central sulcus on its anterior border and and by the longitudinal cerebral fissure on its medial border. Posteriorly it shares an arbitrary border with the occipital lobe.
parietal cortex
BTO:0001001
Parietal region[accessedResource: FMAID:61826][accessDate: 10-05-2010]
FMAID:61826
James Malone
The upper central lobe of the cerebral hemisphere, separated from the temporal lobe below by the lateral sulcus, but continuous at the posterior end of that sulcus, and separated from the frontal lobe by the central sulcus. Behind, it is continuous with the occipital lobe on the lateral surface, but separated from it by the parietooccipital sulcus on the medial surface.
The upper central lobe of the cerebral hemisphere, separated from the temporal lobe below by the lateral sulcus, but continuous at the posterior end of that sulcus, and separated from the frontal lobe by the central sulcus. Behind, it is continuous with the occipital lobe on the lateral surface, but separated from it by the parietooccipital sulcus on the medial surface.[accessedResource: BTO:0001001][accessDate: 10-05-2010]
Parietal cortex[accessedResource: FMAID:61826][accessDate: 10-05-2010]
parietal lobe
http://www.ebi.ac.uk/efo/EFO_0001821
CHEBI:23530
cytokinins
James Malone
http://www.ebi.ac.uk/efo/EFO_0001877
CHEBI:48358
polar aprotic solvent
James Malone
http://jaxmice.jax.org/strain/009268.html
ILSXISS41/TejJ
Tomasz Adamusiak
FBbt:00005832
A0dorEC
A0dorEC[accessedResource: FBbt:00005832][accessDate: 10-05-2010]
dorsal ectoderm anlage in statu nascendi
James Malone
T24
James Malone
Ele Holloway
http://jaxmice.jax.org/strain/009286.html
ILSXISS99/TejJ
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0000628
James Malone
Jie Zheng
Tomasz Adamusiak
MO_867
The food provided to the organism (e.g., chow, fertilizer, DEMM 10%FBS, etc.).
this should become a quality of a material i think
nutrient
chow, fertilizer, DEMM 10%FBS
An assay in which the methylation state of DNA is determined and is compared between samples using array technology
methylation profiling by array
A cord arising from the navel that connects the fetus with the placenta; also: yolk stalk
connecting stalk
EVM:2000364
connecting stalk[accessedResource: MAT:0000280][accessDate: 10-05-2010]
EV:0100127
FMAID:85541
James Malone
EHDAA:158
MAT:0000280
A cord arising from the navel that connects the fetus with the placenta; also: yolk stalk[accessedResource: BTO:0001415][accessDate: 10-05-2010]
EV:3000467
SAEL:113
BTO:0001415
umbilical cord
Meningitides[accessedResource: MSH:D008581][accessDate: 10-05-2010]
Meningitis (disorder)
Meningitis is a nervous system infectious disease characterized as an inflammation of the pia-arachnoid meninges. It can be caused by growth of bacteria, fungi, or parasites within the subarachnoid space or by the growth of bacteria or viruses within the meningeal or ependymal cells. Meningitis is a diffuse infection caused by a variety of different agents.[accessedResource: DOID:9471][accessDate: 10-05-2010]
Meningitis of unspecified cause
Unspecified meningitis (disorder)
Pachymeningitis[accessedResource: MSH:D008581][accessDate: 10-05-2010]
GeneRIF:12707352
Meningitis of unspecified cause (disorder)
MENINGITIS NOS
Inflammation of the coverings of the brain and/or spinal cord, which consist of the PIA MATER; ARACHNOID; and DURA MATER. Infections (viral, bacterial, and fungal) are the most common causes of this condition, but subarachnoid hemorrhage (HEMORRHAGES, SUBARACHNOID), chemical irritation (chemical MENINGITIS), granulomatous conditions, neoplastic conditions (CARCINOMATOUS MENINGITIS), and other inflammatory conditions may produce this syndrome. (From Joynt, Clinical Neurology, 1994, Ch24, p6)[accessedResource: MSH:D008581][accessDate: 10-05-2010]
Meningitis, unspecified
Pachymeningitides[accessedResource: MSH:D008581][accessDate: 10-05-2010]
SNOMEDCT:7180009
Meningitis is a nervous system infection characterized as an inflammation of the pia-arachnoid meninges. It can be caused by growth of bacteria, fungi, or parasites within the subarachnoid space or by the growth of bacteria or viruses within the meningeal or ependymal cells. Meningitis is a diffuse infection caused by a variety of different agents.
A disorder characterized by acute inflammation of the meninges of the brain and/or spinal cord.[accessedResource: NCIt:C26828][accessDate: 10-05-2010]
Pachymeningitis
Meningitis of unspecified cause (disorder)[accessedResource: SNOMEDCT:192678004][accessDate: 10-05-2010]
A disorder characterized by acute inflammation of the meninges of the brain and/or spinal cord.
ICD9:322.9
Meningitis is a nervous system infectious disease characterized as an inflammation of the pia-arachnoid meninges. It can be caused by growth of bacteria, fungi, or parasites within the subarachnoid space or by the growth of bacteria or viruses within the meningeal or ependymal cells. Meningitis is a diffuse infection caused by a variety of different agents.
Pachymeningitides
Meningitides
SNOMEDCT:192678004
James Malone
GeneRIF:15449178
Unspecified meningitis (disorder)[accessedResource: SNOMEDCT:192681009][accessDate: 10-05-2010]
Meningitis (disorder)[accessedResource: DOID:9471][accessDate: 10-05-2010]
GeneRIF:11821235
NCIt:C26828
Inflammation of the coverings of the brain and/or spinal cord, which consist of the PIA MATER; ARACHNOID; and DURA MATER. Infections (viral, bacterial, and fungal) are the most common causes of this condition, but subarachnoid hemorrhage (HEMORRHAGES, SUBARACHNOID), chemical irritation (chemical MENINGITIS), granulomatous conditions, neoplastic conditions (CARCINOMATOUS MENINGITIS), and other inflammatory conditions may produce this syndrome. (From Joynt, Clinical Neurology, 1994, Ch24, p6)
Meningitis of unspecified cause[accessedResource: DOID:9471][accessDate: 10-05-2010]
MENINGITIS NOS[accessedResource: ICD9:322.9][accessDate: 10-05-2010]
DOID:9471
meningitis
MSH:D008581
meningitis due to organism
ICD9:322
GeneRIF:12198614
Meningitis, unspecified[accessedResource: DOID:9471][accessDate: 10-05-2010]
SNOMEDCT:192681009
meningitis due to organism[accessedResource: DOID:9471][accessDate: 10-05-2010]
Kobalt chlorid
cobalt(II) chloride
InChIKey=GVPFVAHMJGGAJG-ARVHXSLACZ
cobaltous chloride
cobaltous chloride anhydrous
http://www.ebi.ac.uk/efo/EFO_0001511
cobaltous dichloride
dichlorocobalt
Kobalt(II)-chlorid
cobalt muriate
CoCl2
cobalt dichloride
CHEBI:35696
Chloride of cobalt in which the metal is in the +2 oxidation state.
Kobaltdichlorid
[Cl-].[Cl-].[Co++]
cobalt(2+) chloride
Cl2Co
InChI=1/2ClH.Co/h2*1H;/q;;+2/p-2/f2Cl.Co/h2*1h;/q2*-1;m
Made obsolete: considered as synonym to invasive ductal carcinoma
true
obsolete_infiltrating ductal carcinoma
Tomasz Adamusiak
protein
polypeptide
MO_683
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001459
A protein is an (also known as polypeptides) organic compound made of amino acids arranged in a linear chain and folded into a globular form.
PRO:000000001
James Malone
GeneRIF:16021077
GeneRIF:15866083
GeneRIF:12908999
GeneRIF:15775999
SNOMEDCT:398254007
Toxemia of pregnancy
GeneRIF:14671210
GeneRIF:12892901
GeneRIF:12651901
GeneRIF:16091310
PREGN TOXEMIAS[accessedResource: MSH:D011225][accessDate: 10-05-2010]
NCIt:C34943
PET - Pre-eclamptic toxemia[accessedResource: SNOMEDCT:398254007][accessDate: 10-05-2010]
GeneRIF:15886253
GeneRIF:12911547
Pre-eclampsia, unspecified
EPH Toxemia
GeneRIF:15097012
GeneRIF:15544427
GeneRIF:15163465
GeneRIF:15901845
DOID:10591
GeneRIF:15140512
GeneRIF:16150277
GeneRIF:15135235
GeneRIF:15695771
GeneRIF:12897464
Proteinuria-Edema-Hypertension Gestosis
Toxemia of pregnancy, NOS
GeneRIF:16182107
GeneRIF:15817508
PE - Pre-eclampsia
Toxemias, EPH[accessedResource: MSH:D011225][accessDate: 10-05-2010]
Pre-eclampsia NOS
GeneRIF:12757936
GeneRIF:12324185
Proteinuria Edema Hypertension Gestosis[accessedResource: MSH:D011225][accessDate: 10-05-2010]
PET - Pre-eclamptic toxemia
EPH Complex[accessedResource: MSH:D011225][accessDate: 10-05-2010]
EPH - Oedema, proteinuria and hypertension of pregnancy[accessedResource: SNOMEDCT:398254007][accessDate: 10-05-2010]
PE - Pre-eclampsia[accessedResource: SNOMEDCT:398254007][accessDate: 10-05-2010]
EPH Toxemias
pregnancy toxemia[accessedResource: DOID:10591][accessDate: 10-05-2010]
GeneRIF:14634568
GeneRIF:11969342
GeneRIF:15110896
Pre-eclampsia (disorder)[accessedResource: DOID:10591][accessDate: 10-05-2010]
SNOMEDCT:15394000
GeneRIF:14967168
A complication of PREGNANCY, characterized by a complex of symptoms including maternal HYPERTENSION and PROTEINURIA with or without pathological EDEMA. Symptoms may range between mild and severe. Pre-eclampsia usually occurs after the 20th week of gestation, but may develop before this time in the presence of trophoblastic disease.
GeneRIF:12867763
GeneRIF:15784708
GeneRIF:12654717
GeneRIF:11905404
Toxaemia NOS[accessedResource: SNOMEDCT:237280005][accessDate: 10-05-2010]
GeneRIF:15364897
GeneRIF:12545206
GeneRIF:12104097
SNOMEDCT:237280005
GeneRIF:15974297
Gestosis, EPH[accessedResource: MSH:D011225][accessDate: 10-05-2010]
GeneRIF:14673478
A complication of PREGNANCY, characterized by a complex of symptoms including maternal HYPERTENSION and PROTEINURIA with or without pathological EDEMA. Symptoms may range between mild and severe. Pre-eclampsia usually occurs after the 20th week of gestation, but may develop before this time in the presence of trophoblastic disease.[accessedResource: MSH:D011225][accessDate: 10-05-2010]
Toxaemia of pregnancy
EPH - Edema, proteinuria and hypertension of pregnancy
Pre-Eclampsia[accessedResource: DOID:10591][accessDate: 10-05-2010]
Toxemia NOS (disorder)[accessedResource: DOID:10591][accessDate: 10-05-2010]
GeneRIF:16157088
Pre-eclamptic NOS
GeneRIF:15081636
Toxaemia of pregnancy[accessedResource: DOID:10591][accessDate: 10-05-2010]
GeneRIF:14605992
GeneRIF:12362237
GeneRIF:12634647
Pre-eclamptic toxaemia
Pre-eclamptic toxaemia[accessedResource: DOID:10591][accessDate: 10-05-2010]
Toxemias, Pregnancy
GeneRIF:15369653
GeneRIF:15569322
GeneRIF:15472115
GeneRIF:14746952
EPH Gestosis
Pre-eclamptic toxemia
Toxemia of pregnancy, NOS[accessedResource: SNOMEDCT:15394000][accessDate: 10-05-2010]
Pre-eclamptic toxemia[accessedResource: SNOMEDCT:398254007][accessDate: 10-05-2010]
Toxemia NOS (disorder)
GeneRIF:12044319
GeneRIF:15585559
GeneRIF:14517225
GeneRIF:12593997
GeneRIF:12727995
GeneRIF:11950065
GeneRIF:12867761
Pre-eclampsia NOS[accessedResource: DOID:10591][accessDate: 10-05-2010]
GeneRIF:15501905
GeneRIF:15097234
PREGN TOXEMIAS
Toxemia of pregnancy[accessedResource: SNOMEDCT:15394000][accessDate: 10-05-2010]
Pre-eclampsia, unspecified[accessedResource: SNOMEDCT:288201007][accessDate: 10-05-2010]
Toxemia of pregnancy (disorder)
PET - Pre-eclamptic toxaemia
SNOMEDCT:288201007
GeneRIF:12163461
GeneRIF:16021053
GeneRIF:14638622
Pre-eclampsia NOS (disorder)
Toxaemia NOS
GeneRIF:16059745
Pre-eclamptic NOS[accessedResource: DOID:10591][accessDate: 10-05-2010]
GeneRIF:14634580
GeneRIF:15193868
GeneRIF:12173035
Pre-eclampsia NOS (disorder)[accessedResource: DOID:10591][accessDate: 10-05-2010]
EPH Complex
Pre Eclampsia
Pre-eclampsia (disorder)
PET - Pre-eclamptic toxaemia[accessedResource: SNOMEDCT:398254007][accessDate: 10-05-2010]
Proteinuric hypertension of pregnancy[accessedResource: DOID:10591][accessDate: 10-05-2010]
Toxemia of pregnancy (disorder)[accessedResource: SNOMEDCT:15394000][accessDate: 10-05-2010]
GeneRIF:16036389
GeneRIF:14671202
EPH - Oedema, proteinuria and hypertension of pregnancy
Toxemias, Pregnancy[accessedResource: MSH:D011225][accessDate: 10-05-2010]
Toxemia NOS
Proteinuric hypertension of pregnancy
James Malone
EPH Toxemia[accessedResource: MSH:D011225][accessDate: 10-05-2010]
GeneRIF:12699878
GeneRIF:11854637
EPH - Edema, proteinuria and hypertension of pregnancy[accessedResource: SNOMEDCT:398254007][accessDate: 10-05-2010]
GeneRIF:15042014
GeneRIF:11969341
MSH:D011225
GeneRIF:15082899
GeneRIF:12859429
preeclampsia
Toxemia NOS[accessedResource: SNOMEDCT:237280005][accessDate: 10-05-2010]
Pregnancy Toxemia
Toxaemia of pregnancy, NOS[accessedResource: SNOMEDCT:15394000][accessDate: 10-05-2010]
Toxaemia of pregnancy, NOS
GeneRIF:14662163
GeneRIF:15085177
GeneRIF:16191421
embryonic day 15.5
Tomasz Adamusiak
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0002025
James Malone
thermal cycler
An instrument that is capable of repeatedly altering and maintaining specific temperatures for defined periods of time.
Polymerase_Chain_Reaction_ machine
thermocycler
MO_854
DNA_amplifier
PCR_machine
James Malone
UACC812
Ele Holloway
James Malone
HEC-1-B
HEC-1B
HEC1B
LS174T
James Malone
Ele Holloway
James Malone
Ele Holloway
ITV
1.8
true
obsolete_MOLT4
James Malone
duplicate of EFO_0001220
Cancer of Prostate
Prostate Cancer
Carcinoma of Prostate
Carcinoma of the Prostate[accessedResource: NCIt:C4863][accessDate: 10-05-2010]
DOID:10286
Tomasz Adamusiak
prostate carcinoma
One of the most common malignant tumors afflicting men. The majority of carcinomas arise in the peripheral zone and a minority occur in the central or the transitional zone of the prostate gland. Grossly, prostatic carcinomas appear as ill-defined yellow areas of discoloration in the prostate gland lobes. Adenocarcinomas represent the overwhelming majority of prostatic carcinomas. Prostatic-specific antigen (PSA) serum test is widely used as a screening test for the early detection of prostatic carcinoma. Treatment options include radical prostatectomy, radiation therapy, androgen ablation and cryotherapy. Watchful waiting or surveillance alone is an option for older patients with low-grade or low-stage disease. -- 2002
One of the most common malignant tumors afflicting men. The majority of carcinomas arise in the peripheral zone and a minority occur in the central or the transitional zone of the prostate gland. Grossly, prostatic carcinomas appear as ill-defined yellow areas of discoloration in the prostate gland lobes. Adenocarcinomas represent the overwhelming majority of prostatic carcinomas. Prostatic-specific antigen (PSA) serum test is widely used as a screening test for the early detection of prostatic carcinoma. Treatment options include radical prostatectomy, radiation therapy, androgen ablation and cryotherapy. Watchful waiting or surveillance alone is an option for older patients with low-grade or low-stage disease. -- 2002[accessedResource: NCIt:C4863][accessDate: 10-05-2010]
Cancer of Prostate[accessedResource: NCIt:C4863][accessDate: 10-05-2010]
Carcinoma of the Prostate
Prostate Cancer[accessedResource: NCIt:C4863][accessDate: 10-05-2010]
NCIt:C4863
Carcinoma of Prostate[accessedResource: NCIt:C4863][accessDate: 10-05-2010]
Cancer of the Prostate[accessedResource: NCIt:C4863][accessDate: 10-05-2010]
Cancer of the Prostate
James Malone
http://www.ebi.ac.uk/efo/EFO_0001609
InChIKey=COFLCBMDHTVQRA-DABHNVCVBQ
CHEBI:36779
c1cc2cc3ccc([nH]3)c3ccc(cc4ccc(cc5ccc(cc1n2)[nH]5)n4)[nH]3
InChI=1/C24H17N5/c1-2-16-12-18-4-6-20(27-18)14-22-8-10-24(29-22)23-9-7-21(28-23)13-19-5-3-17(26-19)11-15(1)25-16/h1-14,25,28-29H/b15-11-,16-12-,17-11-,18-12-,19-13-,20-14-,21-13-,22-14-,24-23-
C24H17N5
sapphyrin
A sapphyrin that has formula C24H17N5.
Jie Zheng
A volume unit which is equal to one thousandth of a cubic meter or 10^[-3] m^[3], or to 1 decimeter.
l
true
Tomasz Adamusiak
A liter is a volume unit which is equal to one thousandth of a cubic meter or 10^-3 m^3, or to 1 decimeter.
http://www.ebi.ac.uk/efo/EFO_0001713
James Malone
liter
MO_444
A chorion cell line is a cell line that is derived from the chorion.
chorion cell line
NCIt:C13740
Embryoblast
Embryoblast[accessedResource: NCIt:C13740][accessDate: 10-05-2010]
inner cell mass
James Malone
TAO:0000317
postcranial axial skeleton[accessedResource: TAO:0000317][accessDate: 10-05-2010]
vertebral column[accessedResource: MAT:0000148][accessDate: 10-05-2010]
The post-cranial structural components forming the long axis of the vertebrate body; usually consists of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.[accessedResource: TAO:0000317][accessDate: 10-05-2010]
EMAPA:17214
vertebral column
ZFA:0000317
postcranial axial skeleton
The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.[accessedResource: ZFA:0000317][accessDate: 10-05-2010]
*Subdivision of skeleton which consists of the bones of the vertebral column, the thoracic cage and the pelvis.
EHDAA:5049
axial skeleton[accessedResource: MAT:0000148][accessDate: 10-05-2010]
James Malone
The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.
MA:0000308
MAT:0000148
FMAID:71221
AAO:0000034
The post-cranial structural components forming the long axis of the vertebrate body; usually consists of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.
axial skeleton structure
SAEL:121
axial skeleton
*Subdivision of skeleton which consists of the bones of the vertebral column, the thoracic cage and the pelvis.[accessedResource: FMAID:71221][accessDate: 10-05-2010]
postcranial axia skelton
postcranial axia skelton[accessedResource: MAT:0000148][accessDate: 10-05-2010]
Other diseases of the intestines and peritoneum (disorder)[accessedResource: SNOMEDCT:197043006][accessDate: 10-05-2010]
Other specified disorders of rectum and anus[accessedResource: ICD9:569.49][accessDate: 10-05-2010]
[X]Other diseases of intestines (disorder)
[X]Other specified diseases of anus and rectum
[X]Other diseases of intestines
Other gallbladder disorders NOS (disorder)[accessedResource: SNOMEDCT:197435005][accessDate: 10-05-2010]
Other diseases of the intestines and peritoneum (disorder)
Disorder of digestive system[accessedResource: SNOMEDCT:53619000][accessDate: 10-05-2010]
SNOMEDCT:197407006
ICD9:569.4
Pilosebaceous Nevoid disorder
Other intestine disorders
ICD9:569.49
James Malone
SNOMEDCT:197043006
ICD9:569
ICD9:575
Disease of digestive system, NOS[accessedResource: SNOMEDCT:53619000][accessDate: 10-05-2010]
Disorder of digestive system (disorder)[accessedResource: SNOMEDCT:53619000][accessDate: 10-05-2010]
acne nevus
RECTAL & ANAL DIS NEC
Other intestinal disorders NOS (disorder)[accessedResource: SNOMEDCT:197264003][accessDate: 10-05-2010]
Digestive system diseases NOS (disorder)[accessedResource: SNOMEDCT:197575000][accessDate: 10-05-2010]
SNOMEDCT:197575000
SNOMEDCT:53619000
[X]Other diseases of the digestive system
ICD9:520-579.99
SNOMEDCT:197264003
Disorder of digestive system
Other diseases of the intestines and peritoneum
Other gallbladder disorders (disorder)[accessedResource: SNOMEDCT:197407006][accessDate: 10-05-2010]
Gastrointestinal and digestive disorder
GIT diseases[accessedResource: SNOMEDCT:53619000][accessDate: 10-05-2010]
ICD9:564.4
Other gallbladder disorders[accessedResource: SNOMEDCT:197407006][accessDate: 10-05-2010]
ICD9:560-569.99
nevus comedonicus (disorder)
Digestive system diseases NOS
[X]Other diseases of intestines (disorder)[accessedResource: SNOMEDCT:197538005][accessDate: 10-05-2010]
Other intestinal disorders NOS
Disease of digestive system, NOS
Other postoperative functional disorders
Disease of digestive system
Disease of digestive system (disorder)[accessedResource: SNOMEDCT:53619000][accessDate: 10-05-2010]
Other intestine disorders[accessedResource: SNOMEDCT:197209006][accessDate: 10-05-2010]
SNOMEDCT:197569009
DOID:27
[X]Other specified diseases of anus and rectum (disorder)
nevus comedonicus (disorder)[accessedResource: DOID:27][accessDate: 10-05-2010]
POSTOP GI FUNCT DIS NEC
[X]Other specified diseases of anus and rectum[accessedResource: SNOMEDCT:197543003][accessDate: 10-05-2010]
Other disorders of intestine (disorder)
Other intestinal disorders NOS (disorder)
Other intestinal disorders NOS[accessedResource: SNOMEDCT:197264003][accessDate: 10-05-2010]
digestive system disease
ICD9:570-579.99
[X]Other specified diseases of anus and rectum (disorder)[accessedResource: SNOMEDCT:197543003][accessDate: 10-05-2010]
Digestive system diseases NOS[accessedResource: SNOMEDCT:197575000][accessDate: 10-05-2010]
Gastrointestinal and digestive disorder[accessedResource: SNOMEDCT:53619000][accessDate: 10-05-2010]
Other gallbladder disorders
Disease of digestive system (disorder)
Digestive system diseases NOS (disorder)
Other gallbladder disorders NOS[accessedResource: SNOMEDCT:197435005][accessDate: 10-05-2010]
Disease of digestive system[accessedResource: SNOMEDCT:53619000][accessDate: 10-05-2010]
[X]Other diseases of intestines[accessedResource: SNOMEDCT:197538005][accessDate: 10-05-2010]
Other gallbladder disorders NOS (disorder)
[X]Other diseases of the digestive system[accessedResource: SNOMEDCT:197569009][accessDate: 10-05-2010]
Other disorders of intestine (disorder)[accessedResource: SNOMEDCT:197209006][accessDate: 10-05-2010]
Disorder of digestive system (disorder)
Other disorders of intestine[accessedResource: SNOMEDCT:197209006][accessDate: 10-05-2010]
Other diseases of the intestines and peritoneum[accessedResource: SNOMEDCT:197043006][accessDate: 10-05-2010]
Other specified disorders of rectum and anus
[X]Other diseases of the digestive system (disorder)
SNOMEDCT:197209006
GIT diseases
SNOMEDCT:197543003
SNOMEDCT:197538005
Other gallbladder disorders (disorder)
[X]Other diseases of the digestive system (disorder)[accessedResource: SNOMEDCT:197569009][accessDate: 10-05-2010]
Other postoperative functional disorders[accessedResource: ICD9:564.4][accessDate: 10-05-2010]
POSTOP GI FUNCT DIS NEC[accessedResource: ICD9:564.4][accessDate: 10-05-2010]
RECTAL & ANAL DIS NEC[accessedResource: ICD9:569.49][accessDate: 10-05-2010]
ICD9:564
Other disorders of intestine
acne nevus[accessedResource: DOID:27][accessDate: 10-05-2010]
SNOMEDCT:197435005
Pilosebaceous Nevoid disorder[accessedResource: DOID:27][accessDate: 10-05-2010]
Other gallbladder disorders NOS
http://www.ebi.ac.uk/efo/EFO_0001890
CHEBI:50629
A cyclooxygenase inhibitor with specificity for cyclooxygenase 2.
cyclooxygenase 2 inhibitor
James Malone
Antimycin A1
antimycin A1b
Virosin
InChIKey=UIFFUZWRFRDZJC-MBZNLELHDN
antimycin A
Antipiricullin
C28H40N2O9
CHEBI:22584
InChI=1/C28H40N2O9/c1-6-7-8-9-11-20-25(39-22(32)14-16(2)3)18(5)38-28(36)23(17(4)37-27(20)35)30-26(34)19-12-10-13-21(24(19)33)29-15-31/h10,12-13,15-18,20,23,25,33H,6-9,11,14H2,1-5H3,(H,29,31)(H,30,34)/t17-,18+,20-,23+,25+/m1/s1/f/h29-30H
http://www.ebi.ac.uk/efo/EFO_0002668
[H]C(=O)Nc1cccc(C(=O)N[C@H]2[C@@H](C)OC(=O)[C@H](CCCCCC)[C@@H](OC(=O)CC(C)C)[C@H](C)OC2=O)c1O
(2R,3S,6S,7R,8R)-3-[(3-formamido-2-hydroxybenzoyl)amino]-8-hexyl-2,6-dimethyl-4,9-dioxo-1,5-dioxonan-7-yl 3-methylbutanoate
A nine-membered bis-lactone having methyl substituents at the 2- and 6-positions, an n-hexyl substituent at the 8-position, an acyloxy substituent at the 7-position and an aroylamido substituent at the 3-position. It is produced by Streptomyces bacteria and has found commercial use as a fish poison.
Fintrol
Use corpus striatum instead (EFO_0000381)
true
obsolete_CNS brain striatum MMHCC
CNS - Brain - Striatum (MMHCC)[accessedResource: NCIt:C22622][accessDate: 10-05-2010]
NCIt:C22622
Striatum
Striatum[accessedResource: NCIt:C22622][accessDate: 10-05-2010]
CNS - Brain - Striatum (MMHCC)
Female reproductive organ.[accessedResource: ZFA:0000403][accessDate: 10-05-2010]
James Malone
FMAID:7209
ovary[accessedResource: TAO:0000403][accessDate: 10-05-2010]
TADS:0000400
ZFA:0000403
TAO:0000403
ovary
FBbt:00004865
Female reproductive organ.
animal ovary
AAO:0000371
SAEL:76
MA:0000384
MAT:0000125
EMAPA:17962
XAO:0000258
ovaries[accessedResource: ZFA:0000403][accessDate: 10-05-2010]
EV:0100111
ovaries
EHDAA:8124
FMAID:3866
Proximal portion of anterior descending branch of left coronary artery
Proximal portion of anterior descending branch of left coronary artery[accessedResource: FMAID:3866][accessDate: 10-05-2010]
proximal portion of anterior interventricular branch of left coronary artery
Tomasz Adamusiak
Jie Zheng
GM11993
James Malone
GM12156
James Malone
James Malone
ectoderm
The outer of the three germ layers of the embryo (the other two being mesoderm and endoderm). Ectoderm gives rise to epidermis and neural tissue.
The outer of the three germ layers of the embryo (the other two being mesoderm and endoderm). Ectoderm gives rise to epidermis and neural tissue.[accessedResource: BTO:0000315][accessDate: 10-05-2010]
BTO:0000315
FBbt:00005428
time
James Malone
http://www.ebi.ac.uk/efo/EFO_0002093
A loess transformation is a data transformation that takes as input a collection of real number pairs (x, y) and, after performing (one or more) loess fittings, utilizes the resulting curves to transform each (x, y) in the input into (x, y-f(x)) where f(x) is one of the fitted curves.
loess transformation
James Malone
A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland. Kimmel et al, 1995.
ZFA:0000026
James Malone
A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland. Kimmel et al, 1995.[accessedResource: TAO:0000026][accessDate: 10-05-2010]
TAO:0000026
hgg
hatching gland
A transversely oriented set of cells located deep to the enveloping layer on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland;The fish hatching gland is a unicellular holocrine gland. Although it has recently been found that the precursors or immature forms of the gland cells considerably migrate in the embryonic body during development (see later), the final location of the hatching gland cells in fish is generally restricted to anterior and/or dorsal regions of a well-grown prehatching embryo. In medaka, the final location is somewhat unique: The giant gland cells are mostly localized in the inner surface of the buccal (or pharyngeal) cavity.
MAT:0000180
A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland.[accessedResource: ZFA:0000026][accessDate: 10-05-2010]
hgg[accessedResource: TAO:0000026][accessDate: 10-05-2010]
BTO:0000558
A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland.
A transversely oriented set of cells located deep to the enveloping layer on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland;The fish hatching gland is a unicellular holocrine gland. Although it has recently been found that the precursors or immature forms of the gland cells considerably migrate in the embryonic body during development (see later), the final location of the hatching gland cells in fish is generally restricted to anterior and/or dorsal regions of a well-grown prehatching embryo. In medaka, the final location is somewhat unique: The giant gland cells are mostly localized in the inner surface of the buccal (or pharyngeal) cavity.[accessedResource: BTO:0000558][accessDate: 10-05-2010]
Ele Holloway
BV173
James Malone
embryonic day 8.25
Tomasz Adamusiak
Jie Zheng
Strain or line specific to Arabidopsis thaliana.
Arabidopsis thaliana
James Malone
N-(3-trifluoromethylphenyl)anthranilic acid
InChI=1/C14H10F3NO2/c15-14(16,17)9-4-3-5-10(8-9)18-12-7-2-1-6-11(12)13(19)20/h1-8,18H,(H,19,20)/f/h19H
Surika
flufenamic acid
N-(alpha,alpha,alpha-trifluoro-m-tolyl)anthranilic acid
3'-trifluoromethyldiphenylamine-2-carboxylic acid
Paraflu
Fullsafe
Ansatin
Tecramine
2-[[3-(TRIFLUOROMETHYL)PHENYL]AMINO] BENZOIC ACID
Ristogen
Arlef
acide flufenamique
acido flufenamico
Sastridex
Flufenaminsaeure
C14H10F3NO2
InChIKey=LPEPZBJOKDYZAD-LILDFLRNCJ
2-[3-(trifluoromethyl)anilino]benzoic acid
FFA
CHEBI:42638
acidum flufenamicum
Parlef
James Malone
fluphenamic acid
Achless
Meralen
http://www.ebi.ac.uk/efo/EFO_0001537
OC(=O)c1ccccc1Nc1cccc(c1)C(F)(F)F
MA:0001245
corneal stroma
James Malone
Ele Holloway
Cervical canal
Cervix of uterus[accessedResource: FMAID:17740][accessDate: 10-05-2010]
Neck of uterus
Uterine cervix
Cervical canal[accessedResource: FMAID:17740][accessDate: 10-05-2010]
EV:0100114
Cervical canal of uterus
Cervix of uterus
SAEL:118
James Malone
FMAID:17740
BTO:0001421
cervix
MAT:0000292
Uterine cervix[accessedResource: FMAID:17740][accessDate: 10-05-2010]
A constricted portion of an organ or part; especially: the narrow outer end of the uterus.[accessedResource: BTO:0001421][accessDate: 10-05-2010]
Neck of uterus[accessedResource: FMAID:17740][accessDate: 10-05-2010]
Cervical canal of uterus[accessedResource: FMAID:17740][accessDate: 10-05-2010]
A constricted portion of an organ or part; especially: the narrow outer end of the uterus.
http://www.arabidopsis.org/servlets/TairObject?id=1005158907&type=germplasm
CS57883 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158907&type=germplasm
CS57883
James Malone
CHEBI:39352
C6H4N2O5
http://www.ebi.ac.uk/efo/EFO_0001524
dinitrophenol
ovarian carcinoma
James Malone
primary myelofibrosis
Tomasz Adamusiak
James Malone
FBbt:00005745
embryonic dorsal apodeme
James Malone
RPMI6666
James Malone
Ele Holloway
A process by which totally or partially complementary, single-stranded nucleic acids are combined into a single molecule called heteroduplex or homoduplex to an extent depending on the amount of complementarity.
nucleic acid hybridization
SW962
James Malone
Ele Holloway
WEB:http://en.wikipedia.org/wiki/Cardiomyopathy#Ischemic_cardiomyopathy
Ischemic cardiomyopathy is a cardiomyopathy in which a weakness in the muscle of the heart due to inadequate oxygen delivery to the myocardium with coronary artery disease being the most common cause.
ischemic cardiomyopathy
James Malone
JVM3
James Malone
Ele Holloway
Human Skeletal Muscle Cells
SKMC
true
A derived unit which is a standard measure of the amount of radiation emitted by a given radiation source as well as the amount of radiation absorbed or deposited in a specific material by a radiation source.
radiation unit
HCC202
James Malone
NCIt:C13115
A cell derived from a promyelocyte. It differentiates into a metamyelocyte. It has a diameter of 10-18 micrometer, and an oval or round nucleus with finely granulated chromatin.
A cell derived from a promyelocyte. It differentiates into a metamyelocyte. It has a diameter of 10-18 micrometer, and an oval or round nucleus with finely granulated chromatin.[accessedResource: NCIt:C13115][accessDate: 10-05-2010]
myelocyte
Tomasz Adamusiak
Jie Zheng
James Malone
Ele Holloway
Caki2
Caki-2
BTO:0001442
Any of the system of communicating cavities in the brain that are continuous with the central canal of the spinal cord.
A brain ventricle is a brain structure consisting of communicating cavities in the brain that are continuous with the central canal of the spinal cord.
Any of the system of communicating cavities in the brain that are continuous with the central canal of the spinal cord.[accessedResource: BTO:0001442][accessDate: 10-05-2010]
brain ventricle
James Malone
MO_808
ex vivo design
Tomasz Adamusiak
true
http://www.ebi.ac.uk/efo/EFO_0000745
An obsolete class is any class which is no longer required in the ontology but is maintained within the ontology file so that an audit trail exists for legacy reasons. Obsolete class and its children is disjoint with the main body of the ontology.
obsolete class
The murine MIN6 cell line derived from in vivo immortalized insulin-secreting pancreatic beta cells.
MIN-6 cell
MIN6 cell[accessedResource: BTO:0002284][accessDate: 10-05-2010]
Natural Language Generator 8th April 2010
A MIN6 is a cell line.
A MIN6 derives from a mus musculus.
Ele Holloway
James Malone
MIN6
MIN6 cell
BTO:0002284
The murine MIN6 cell line derived from in vivo immortalized insulin-secreting pancreatic beta cells.[accessedResource: BTO:0002284][accessDate: 10-05-2010]
MIN-6 cell[accessedResource: BTO:0002284][accessDate: 10-05-2010]
umbilical vein
A vein that passes through the umbilical cord to the fetus and returns the oxygenated and nutrient blood from the placenta to the fetus.
BTO:0001509
NCIt:C33830
James Malone
A vein that passes through the umbilical cord to the fetus and returns the oxygenated and nutrient blood from the placenta to the fetus.[accessedResource: BTO:0001509][accessDate: 10-05-2010]
GeneRIF:15677734
Unspecified disorder of metabolism[accessedResource: DOID:0014667][accessDate: 10-05-2010]
SNOMEDCT:267456000
Generalized metabolic disorder[accessedResource: SNOMEDCT:30390004][accessDate: 10-05-2010]
Metabolic disorders
disease of metabolism[accessedResource: DOID:0014667][accessDate: 10-05-2010]
GeneRIF:12242462
Metabolic disorder, NOS[accessedResource: SNOMEDCT:75934005][accessDate: 10-05-2010]
Generalized metabolic disorder (disorder)
METABOLISM DISORDER NOS
NCIt:C3235
GeneRIF:15231871
disorder of metabolism NOS
DOID:0014667
Generic term for diseases caused by an abnormal metabolic process. It can be congenital due to inherited enzyme abnormality (METABOLISM, INBORN ERRORS) or acquired due to disease of an endocrine organ or failure of a metabolically important organ such as the liver. (Stedman, 26th ed)[accessedResource: MSH:D008659][accessDate: 10-05-2010]
Metabolic Disorder[accessedResource: NCIt:C3235][accessDate: 10-05-2010]
GeneRIF:15246202
MD - Metabolic disorders
GeneRIF:12093894
Generalized metabolic disorder
GeneRIF:12215968
GeneRIF:12707035
Unspecified disorder of metabolism
disease of metabolism
Generic term for diseases caused by an abnormal metabolic process. It can be congenital due to inherited enzyme abnormality (METABOLISM, INBORN ERRORS) or acquired due to disease of an endocrine organ or failure of a metabolically important organ such as the liver. (Stedman, 26th ed)
Metabolic disease, NOS[accessedResource: SNOMEDCT:75934005][accessDate: 10-05-2010]
disorder of metabolism NOS (disorder)
METABOLISM DISORDER NOS[accessedResource: ICD9:277.9][accessDate: 10-05-2010]
Metabolic disorder
A congenital (due to inherited enzyme abnormality) or acquired (due to failure of a metabolic important organ) disorder resulting from an abnormal metabolic process. -- 2003[accessedResource: NCIt:C3235][accessDate: 10-05-2010]
James Malone
Thesaurismoses
metabolism disorder[accessedResource: DOID:0014667][accessDate: 10-05-2010]
METAB DIS
Metabolic disease (disorder)[accessedResource: SNOMEDCT:75934005][accessDate: 10-05-2010]
MD - Metabolic disorders[accessedResource: SNOMEDCT:75934005][accessDate: 10-05-2010]
Diseases, Metabolic[accessedResource: MSH:D008659][accessDate: 10-05-2010]
Thesaurismoses[accessedResource: MSH:D008659][accessDate: 10-05-2010]
Thesaurismosis[accessedResource: MSH:D008659][accessDate: 10-05-2010]
Generalised metabolic disorder[accessedResource: SNOMEDCT:30390004][accessDate: 10-05-2010]
Generalized metabolic disorder (disorder)[accessedResource: SNOMEDCT:30390004][accessDate: 10-05-2010]
DIS METAB[accessedResource: MSH:D008659][accessDate: 10-05-2010]
GeneRIF:16018179
MSH:D008659
Disorder of metabolism NOS[accessedResource: SNOMEDCT:267456000][accessDate: 10-05-2010]
Disorder of metabolism NOS (disorder)[accessedResource: SNOMEDCT:267456000][accessDate: 10-05-2010]
Metabolic disorder, NOS
Metabolic disease, NOS
Generalised metabolic disorder
Thesaurismosis
GeneRIF:12824951
SNOMEDCT:75934005
GeneRIF:12815182
A congenital (due to inherited enzyme abnormality) or acquired (due to failure of a metabolic important organ) disorder resulting from an abnormal metabolic process. -- 2003
SNOMEDCT:30390004
metabolism disorder
Metabolic Diseases
GeneRIF:14592951
GeneRIF:15277400
metabolic disease
ICD9:277.9
Metabolic disease (disorder)
DoTc2 4510
DoTc2
James Malone
Ele Holloway
Tomasz Adamusiak
Jie Zheng
Gastric Antrum[accessedResource: NCIt:C12259][accessDate: 10-05-2010]
The initial part of the pyloric canal of the stomach. This site contains endocrine cells that produce gastrin and somatostatin.
Gastric Antrum
pyloric antrum
Antrum Pylori
Antrum Pylori[accessedResource: NCIt:C12259][accessDate: 10-05-2010]
NCIt:C12259
The initial part of the pyloric canal of the stomach. This site contains endocrine cells that produce gastrin and somatostatin.[accessedResource: NCIt:C12259][accessDate: 10-05-2010]
CGTHW1
James Malone
Ele Holloway
MO_109
IAO_0000010
software
Tomasz Adamusiak
Jie Zheng
InChI=1/C21H30O2/c1-13(22)17-6-7-18-16-5-4-14-12-15(23)8-10-20(14,2)19(16)9-11-21(17,18)3/h12,16-19H,4-11H2,1-3H3/t16-,17+,18-,19-,20-,21+/m0/s1
InChIKey=RJKFOVLPORLFTN-LEKSSAKUBC
A 3-oxo Delta(4)-steroid that has formula C21H30O2.
progesterone
Agolutin
(S)-Pregn-4-en-3,20-dione
CHEBI:17026
C21H30O2
Akrolutin
Delta(4)-pregnene-3,20-dione
4-Pregnene-3,20-dione
Crinone
17alpha-progesterone
Gelbkoerperhormon
(S)-4-Pregnene-3,20-dione
luteohormone
pregn-4-ene-3,20-dione
http://www.ebi.ac.uk/efo/EFO_0001598
corpus luteum hormone
Progesteron
(S)-Progesterone
[H][C@@]12CCC3=CC(=O)CC[C@]3(C)[C@@]1([H])CC[C@]1(C)[C@H](CC[C@@]21[H])C(C)=O
MESSA
James Malone
Ele Holloway
CNS - Brain - Hippocampus (MMHCC)
EMAPA:19148
Ammon's horn
FMAID:62493
NIFSTD:birnlex_721
Ammon's horn[accessedResource: NIFSTD:birnlex_726][accessDate: 10-05-2010]
MAT:0000114
hippocampus
Hippocampus major[accessedResource: FMAID:62493][accessDate: 10-05-2010]
Hippocampus major
NCIt:C22615
James Malone
Cornu Ammonis[accessedResource: NIFSTD:birnlex_726][accessDate: 10-05-2010]
hippocampus proper
CNS - Brain - Hippocampus (MMHCC)[accessedResource: NCIt:C22615][accessDate: 10-05-2010]
A curved elongated ridge that extends over the floor of the descending horn of each lateral ventricle of the brain and consists of gray matter covered on the ventricular surface with white matter;nThe hippocampus is a part of the temporal lobe, which has a well established role in learning, memory and emotion.[accessedResource: BTO:0000601][accessDate: 10-05-2010]
SAEL:51
Tomasz Adamusiak
EV:0100180
Cornu ammonis
A curved elongated ridge that extends over the floor of the descending horn of each lateral ventricle of the brain and consists of gray matter covered on the ventricular surface with white matter;nThe hippocampus is a part of the temporal lobe, which has a well established role in learning, memory and emotion.
MA:0000191
BTO:0000601
NIFSTD:birnlex_726
Hippocampus proper[accessedResource: NIFSTD:birnlex_726][accessDate: 10-05-2010]
FBbt:00005498
P1 ParMus
P1 ParMus[accessedResource: FBbt:00005498][accessDate: 10-05-2010]
dorsal pharyngeal muscle primordium
James Malone
AIDS with dementia (disorder)
DOID:1305
AIDS dementia
HIV associated cognitive and motor complex[accessedResource: DOID:1305][accessDate: 10-05-2010]
AIDS with dementia (disorder)[accessedResource: DOID:1305][accessDate: 10-05-2010]
AIDS dementia complex[accessedResource: DOID:1305][accessDate: 10-05-2010]
Tomasz Adamusiak
NCIt:C2864
Acquired immune deficiency syndrome dementia complex
AIDS dementia complex
acquired immune deficiency syndrome dementia complex[accessedResource: DOID:1305][accessDate: 10-05-2010]
Ele Holloway
HIV associated cognitive and motor complex
A427
James Malone
Ele Holloway
muriate of potash
Monopotassium chloride
A metal chloride salt with a K(+) counterion.
Ele Holloway
InChI=1/ClH.K/h1H;/q;+1/p-1/fCl.K/h1h;/q-1;m
potassium chloride
Klotrix
sylvite
[KCl]
http://www.ebi.ac.uk/efo/EFO_0002418
Kaon-Cl 10
Kaliumchlorid
CHEBI:32588
ClK
Klor-con
James Malone
InChIKey=WCUXLLCKKVVCTQ-UHVCZDMOCF
An inorganic chloride salt that has formula ClK.
true
UO:0000034
http://www.ebi.ac.uk/efo/EFO_0001788
A week is a derived time unit which is equal to 7 days.
A time unit which is equal to 7 days.
week
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158894&type=germplasm
CS57870 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158894&type=germplasm
CS57870
James Malone
NCIH1155
James Malone
Ele Holloway
JM1
James Malone
Ele Holloway
methanol
The simplest aliphatic alcohol, comprising a methyl and an alcohol group.
wood naphtha
MeOH
InChI=1/CH4O/c1-2/h2H,1H3
Methylalkohol
Methyl alcohol
wood spirit
http://www.ebi.ac.uk/efo/EFO_0001672
CH3OH
CH4O
InChIKey=OKKJLVBELUTLKV-UHFFFAOYAX
CHEBI:17790
wood alcohol
James Malone
carbinol
CO
Carcinoma of cervix
Carcinoma of the Cervix
GeneRIF:16298968
cervix carcinoma
Carcinoma of Uterine Cervix
GeneRIF:15856299
GeneRIF:15744560
GeneRIF:15066318
Uterine Cervix Carcinoma
Cancer of the Cervix[accessedResource: NCIt:C9039][accessDate: 10-05-2010]
GeneRIF:12894545
Carcinoma of cervix (disorder)[accessedResource: SNOMEDCT:285432005][accessDate: 10-05-2010]
GeneRIF:15619642
GeneRIF:15736426
A carcinoma that affects the cervix uteri or cervical area.
Cancer of the Uterine Cervix[accessedResource: NCIt:C9039][accessDate: 10-05-2010]
Cervix Uteri Carcinoma
GeneRIF:15131051
cervix carcinoma[accessedResource: DOID:2893][accessDate: 10-05-2010]
Cancer of Uterine Cervix[accessedResource: NCIt:C9039][accessDate: 10-05-2010]
Cancer of the Uterine Cervix
Carcinoma of Cervix Uteri[accessedResource: NCIt:C9039][accessDate: 10-05-2010]
Cervical Cancer[accessedResource: NCIt:C9039][accessDate: 10-05-2010]
GeneRIF:15001834
Cervical carcinoma may arise from either the exocervical squamous epithelium or the endocervical glandular epithelium. The major histologic types of cervical carcinoma are: squamous carcinoma, adenocarcinoma, adenosquamous carcinoma, adenoid cystic carcinoma and undifferentiated carcinoma.
SNOMEDCT:285432005
GeneRIF:15816636
GeneRIF:12820323
GeneRIF:11809691
Carcinoma of cervix (disorder)
GeneRIF:12007187
GeneRIF:15047823
Cancer of Uterine Cervix
GeneRIF:16047742
GeneRIF:12392301
A carcinoma arising from either the exocervical squamous epithelium or the endocervical glandular epithelium. The major histologic types of cervical carcinoma are: squamous carcinoma, adenocarcinoma, adenosquamous carcinoma, adenoid cystic carcinoma and undifferentiated carcinoma.[accessedResource: NCIt:C9039][accessDate: 10-05-2010]
cancer of cervix[accessedResource: DOID:2893][accessDate: 10-05-2010]
NCIt:C9039
GeneRIF:12451999
A carcinoma arising from either the exocervical squamous epithelium or the endocervical glandular epithelium. The major histologic types of cervical carcinoma are: squamous carcinoma, adenocarcinoma, adenosquamous carcinoma, adenoid cystic carcinoma and undifferentiated carcinoma.
A carcinoma that affects the cervix uteri or cervical area.[accessedResource: DOID:2893][accessDate: 10-05-2010]
Cervix Cancer
Uterine Cervix Cancer
Carcinoma of Uterine Cervix[accessedResource: NCIt:C9039][accessDate: 10-05-2010]
Cervix Cancer[accessedResource: NCIt:C9039][accessDate: 10-05-2010]
Carcinoma of the Cervix[accessedResource: NCIt:C9039][accessDate: 10-05-2010]
cervical carcinoma
DOID:2893
carcinoma of the Cervix Uteri
carcinoma cervix uteri[accessedResource: DOID:2893][accessDate: 10-05-2010]
cervical carcinoma (uterus)[accessedResource: DOID:2893][accessDate: 10-05-2010]
GeneRIF:11920583
Cervical Cancer
Cancer of cervix
Uterine Cervix Carcinoma[accessedResource: NCIt:C9039][accessDate: 10-05-2010]
Uterine Cervix Cancer[accessedResource: NCIt:C9039][accessDate: 10-05-2010]
GeneRIF:12893195
GeneRIF:12174873
Carcinoma of the Uterine Cervix[accessedResource: NCIt:C9039][accessDate: 10-05-2010]
Carcinoma of Cervix Uteri
GeneRIF:11957139
GeneRIF:14584072
GeneRIF:12057898
GeneRIF:14578179
carcinoma of the Cervix Uteri[accessedResource: DOID:2893][accessDate: 10-05-2010]
GeneRIF:15201979
Carcinoma of the Uterine Cervix
Carcinoma of cervix[accessedResource: SNOMEDCT:285432005][accessDate: 10-05-2010]
GeneRIF:15386342
GeneRIF:15702969
James Malone
GeneRIF:12748469
GeneRIF:11956602
cervical carcinoma (uterus)
Cancer of the Cervix
Ele Holloway
(2R)-2-amino-3-hydroxypropanoic acid
D-serine
(R)-2-amino-3-hydroxypropanoic acid
CHEBI:16523
InChIKey=MTCFGRXMJLQNBG-QKGSACKDDH
A serine that has formula C3H7NO3.
D-Serin
N[C@H](CO)C(O)=O
InChI=1/C3H7NO3/c4-2(1-5)3(6)7/h2,5H,1,4H2,(H,6,7)/t2-/m1/s1/f/h6H
http://www.ebi.ac.uk/efo/EFO_0002727
C3H7NO3
Tomasz Adamusiak
FMAID:9607
Thymus gland[accessedResource: FMAID:9607][accessDate: 10-05-2010]
XAO:0000163
EMAPA:18768
MFO:0003240
MAT:0000080
BTO:0001374
Thymus gland
EHDAA:9119
thymus
SAEL:107
MA:0000142
A glandular structure of largely lymphoid tissue that functions especially in the development of the body's immune system, is present in the young of most vertebrates typically in the upper anterior chest or at the base of the neck, and tends to atrophy in the adult.
TAO:0001078
A glandular structure of largely lymphoid tissue that functions especially in the development of the body's immune system, is present in the young of most vertebrates typically in the upper anterior chest or at the base of the neck, and tends to atrophy in the adult.[accessedResource: BTO:0001374][accessDate: 10-05-2010]
James Malone
ZFA:0001078
EV:0100138
KS-IMM cell[accessedResource: BTO:0002070][accessDate: 10-05-2010]
KSIMM cell[accessedResource: BTO:0002070][accessDate: 10-05-2010]
KS-IMM cell
KSIMM cell
A KS-IMM is a cell line.
A KS-IMM is bearer of a Kaposi's sarcoma.
The tumorigenic KS IMM cell line derives from Kaposi's sarcoma (KS), a highly angiogenic tumor.
BTO:0002070
James Malone
KS-IMM
Ele Holloway
The tumorigenic KS IMM cell line derives from Kaposi's sarcoma (KS), a highly angiogenic tumor.[accessedResource: BTO:0002070][accessDate: 10-05-2010]
http://www.ebi.ac.uk/efo/EFO_0002396
3-isobutyl-1-methyl-7H-xanthine
1-methyl-3-(propan-2-yl)-3,7-dihydro-1H-purine-2,6-dione
CHEBI:34795
James Malone
3-isobutyl-1-methylxanthine
A 3-isobutyl-1-methylxanthine that has formula C10H14N4O2.
IBMX
3-isobutyl-1-methyl-3,7-dihydro-1H-purine-2,6-dione
1-methyl-3-isobutylxanthine
3-Isobutyl-1-methyxanthine
InChIKey=APIXJSLKIYYUKG-WXRBYKJCCL
1-methyl-3-(2-methylpropyl)-7H-purine-2,6-dione
1-methyl-3-(2-methylpropyl)-3,7-dihydro-1H-purine-2,6-dione
C10H14N4O2
CC(C)Cn1c2nc[nH]c2c(=O)n(C)c1=O
Ele Holloway
InChI=1/C10H14N4O2/c1-6(2)4-14-8-7(11-5-12-8)9(15)13(3)10(14)16/h5-6H,4H2,1-3H3,(H,11,12)/f/h11H
2.0.1
true
Strain or line specific to Drosophila melanogaster
obsolete_Drosophila melanogaster strain
James Malone
consolodation of strain with taxon, all subclasses moved to Drosophila melanogaster
Ele Holloway
HMCB
James Malone
assay by instrument
A site from which a sample, i.e. a statistically representative of the whole, is extracted from the whole. e.g. a liver sample
sampling site
James Malone
Ryukyu mouse
http://www.ebi.ac.uk/efo/EFO_0002645
Mus caroli
James Malone
RL
James Malone
Ele Holloway
An assay in which high throughput sequencing technology is used to analyse the microRNA component of the transcriptome.
microRNA profiling by high throughput sequencing
James Malone
Neoplatin
Platamine
H6Cl2N2Pt
InChIKey=LXZZYRPGZAFOLE-WMUYXLCICY
James Malone
Briplatin
Platinex
cis-diammineplatinum(II) dichloride
(SP-4-2)-diamminedichloridoplatinum
cis-DDP
Peyrone's chloride
A platinum-containing anticancer drug that interacts with, and forms cross-links between, DNA and proteins. It is used as a neoplasm inhibitor to treat solid tumours, primarily of the testis and ovary.
Cismaplat
cis-diamminedichloridoplatinum(II)
Cl2H6N2Pt
[H][N]([H])([H])[Pt](Cl)(Cl)[N]([H])([H])[H]
Randa
cis-diamminedichloroplatinum(II)
cisplatine
http://www.ebi.ac.uk/efo/EFO_0001507
cis-dichlorodiammineplatinum(II)
cisplatino
(SP-4-2)-diamminedichloroplatinum
InChI=1/2ClH.2H3N.Pt/h2*1H;2*1H3;/q;;;;+2/p-2/f2Cl.2H3N.Pt/h2*1h;;;/q2*-1;;;m
CHEBI:27899
cisplatinum
cis-diamminedichloroplatinum
Lederplatin
cis-[PtCl2(NH3)2]
cisplatin
Platinol
Peyrone's salt
NCIt:C12778
renal artery
Tomasz Adamusiak
Jie Zheng
http://www.arabidopsis.org/servlets/TairObject?id=1005158682&type=germplasm
CS57658 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158682&type=germplasm
CS57658
James Malone
8-chloro-11-(4-methylpiperazin-1-yl)-5H-dibenzo[b,e][1,4]diazepine
InChI=1/C18H19ClN4/c1-22-8-10-23(11-9-22)18-14-4-2-3-5-15(14)20-16-7-6-13(19)12-17(16)21-18/h2-7,12,20H,8-11H2,1H3
clozapine
James Malone
Clozapin
A benzodiazepine that has formula C18H19ClN4.
CN1CCN(CC1)C2=Nc3cc(Cl)ccc3Nc4ccccc24
InChIKey=QZUDBNBUXVUHMW-UHFFFAOYAL
CHEBI:3766
http://www.ebi.ac.uk/efo/EFO_0001510
clozapina
clozapinum
C18H19ClN4
The surface layer of gray matter of the cerebrum that functions chiefly in coordination of sensory and motor information.[accessedResource: BTO:0000233][accessDate: 10-05-2010]
Superficial layer of the brain, composed of glia and the cell bodies of neurons (soma).
brain cortex[accessedResource: BTO:0000233][accessDate: 10-05-2010]
EHDAA:5464
James Malone
BTO:0000233
MAT:0000108
SAEL:20
EV:0100166
MA:0000185
Cortex of cerebral hemisphere[accessedResource: FMAID:61830][accessDate: 10-05-2010]
FMAID:61830
perikaryal rind[accessedResource: FBbt:00003625][accessDate: 10-05-2010]
cerebral cortex
FBbt:00003625
brain cortex
Cortex of cerebral hemisphere
Superficial layer of the brain, composed of glia and the cell bodies of neurons (soma).[accessedResource: FBbt:00003625][accessDate: 10-05-2010]
adult brain cortex[accessedResource: FBbt:00003625][accessDate: 10-05-2010]
EMAPA:17544
adult brain cortex
The surface layer of gray matter of the cerebrum that functions chiefly in coordination of sensory and motor information.
perikaryal rind
as-Dimethyl sulfite
Methyl mesylate
C2H6O3S
CB1540
methyl methanesulfonate
InChI=1/C2H6O3S/c1-5-6(2,3)4/h1-2H3
Methanesulfonic acid methyl ester
COS(C)(=O)=O
http://www.ebi.ac.uk/efo/EFO_0001573
MMS
InChIKey=MBABOKRGFJTBAE-UHFFFAOYAK
A methanesulfonate ester that has formula C2H6O3S.
CHEBI:25255
Synonym of environmental factor
true
The external elements and conditions which surround, influence, and affect the life and development of an organism or population.
obsolete_environment
James Malone
http://www.ebi.ac.uk/efo/EFO_0001874
CHEBI:48218
antiseptic drug
James Malone
MA:0000912
perirhinal cortex
James Malone
phospholipase A2 inhibitors
http://www.ebi.ac.uk/efo/EFO_0001887
CHEBI:50469
phospholipase A2 inhibitor
James Malone
MO_477
A sonicator is an instrument that converts a variable electrical current to mechanical vibration of a metalic probe. The instrument is used for the lysis of cells, the mixing of compounds or solutions, or to create emulsions. [accessedResource: http://purl.obolibrary.org/obo/OBI_0400114][accessDate: 2009-08-12]
http://www.ebi.ac.uk/efo/EFO_0002023
An instrument that converts a variable electrical current to mechanical vibration of a metallic probe. The instrument is used for the lysis of cells, the mixing of compounds or solutions, or to create emulsions.
sonicator
James Malone
NCIH2087
James Malone
Ele Holloway
2.1
true
obsolete_ChIP-seq by high throughput sequencing
Consolodated with ChiP-seq EFO_0002692
corpus Wolffi[accessedResource: BTO:0001542][accessDate: 10-05-2010]
middle kidney[accessedResource: BTO:0001542][accessDate: 10-05-2010]
mesonephron
The excretory organ of the embryo, arising caudal to the pronephros or pronephric rudiments and using its duct; it consists of a long tube in the lower part of the body cavity, running parallel with the vertebral axis and joined at right angles by a row of twisting tubes.
BTO:0001542
kidney
mesonephros
James Malone
mesonephrpric kidney
mesonephrpric kidney[accessedResource: MAT:0000118][accessDate: 10-05-2010]
corpus Wolffi
kidney[accessedResource: ZFA:0000529][accessDate: 10-05-2010]
kidney - fish
mesonephron[accessedResource: BTO:0001542][accessDate: 10-05-2010]
MFO:0003300
The functioning kidney in fish and amphibia[accessedResource: MAT:0000118][accessDate: 10-05-2010]
kidney - fish[accessedResource: MAT:0000118][accessDate: 10-05-2010]
MAT:0000118
ZFA:0000529
wolffian body[accessedResource: BTO:0001542][accessDate: 10-05-2010]
mesonephros - adult[accessedResource: MAT:0000118][accessDate: 10-05-2010]
wolffian body
The excretory organ of the embryo, arising caudal to the pronephros or pronephric rudiments and using its duct; it consists of a long tube in the lower part of the body cavity, running parallel with the vertebral axis and joined at right angles by a row of twisting tubes.[accessedResource: BTO:0001542][accessDate: 10-05-2010]
TAO:0000529
mesonephros - adult
XAO:0000154
The functioning kidney in fish and amphibia
middle kidney
CL:0000062
A bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone.
A bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone.[accessedResource: CL:0000062][accessDate: 10-05-2010]
osteoblast
James Malone
scapula
shoulder blade
The flat triangle-shaped bone that connects the humerus with the clavicle in the back of the shoulder.
BTO:0001218
Shoulder Blade[accessedResource: NCIt:C12783][accessDate: 10-05-2010]
Either of a pair of large triangular bones lying one in each dorsal lateral scapula: part of the thorax, being the principal bone of the corresponding half of the shoulder girdle, and articulating with the corresponding clavicle or coracoid.
NCIt:C12783
The flat triangle-shaped bone that connects the humerus with the clavicle in the back of the shoulder.[accessedResource: NCIt:C12783][accessDate: 10-05-2010]
scapula bone
Either of a pair of large triangular bones lying one in each dorsal lateral scapula: part of the thorax, being the principal bone of the corresponding half of the shoulder girdle, and articulating with the corresponding clavicle or coracoid.[accessedResource: BTO:0001218][accessDate: 10-05-2010]
scapula bone[accessedResource: BTO:0001218][accessDate: 10-05-2010]
James Malone
DKMG
James Malone
Ele Holloway
MO_753
data analyst
Tomasz Adamusiak
BTO:0001563
vastus lateralis
vastus externus[accessedResource: BTO:0001563][accessDate: 10-05-2010]
NCIt:C53073
James Malone
The division of the quadriceps muscle that covers the outer anterior aspect of the femur, arises chiefly from the femur, and inserts into the outer border of the patella by a flat tendon which blends with that of the other divisions of the muscle and sends an expansion to the capsule of the knee.[accessedResource: BTO:0001563][accessDate: 10-05-2010]
vastus externus
The division of the quadriceps muscle that covers the outer anterior aspect of the femur, arises chiefly from the femur, and inserts into the outer border of the patella by a flat tendon which blends with that of the other divisions of the muscle and sends an expansion to the capsule of the knee.
Acute Cerebrovascular Accident[accessedResource: MSH:D020521][accessDate: 10-05-2010]
Strokes, Cerebral[accessedResource: MSH:D020521][accessDate: 10-05-2010]
GeneRIF:15090053
GeneRIF:11570818
GeneRIF:15044955
A sudden loss of neurological function secondary to hemorrhage or ischemia in the brain parenchyma due to a vascular event.
Acute Cerebrovascular Accidents
GeneRIF:12122874
Strokes[accessedResource: MSH:D020521][accessDate: 10-05-2010]
GeneRIF:11926892
GeneRIF:16109906
Tomasz Adamusiak
GeneRIF:15677572
GeneRIF:15681302
GeneRIF:15056284
GeneRIF:15277638
CVA - Cerebrovascular accident unspecified[accessedResource: DOID:3455][accessDate: 10-05-2010]
Stroke and cerebrovascular accident unspecified[accessedResource: SNOMEDCT:270883006][accessDate: 10-05-2010]
Acute Stroke[accessedResource: MSH:D020521][accessDate: 10-05-2010]
SNOMEDCT:270883006
GeneRIF:16165118
GeneRIF:14644079
GeneRIF:15634282
GeneRIF:16051896
GeneRIF:15910856
GeneRIF:12508918
GeneRIF:14500739
Stroke/CVA - undefined[accessedResource: DOID:3455][accessDate: 10-05-2010]
GeneRIF:16262627
Stroke/CVA - undefined
Cerebrovascular Accidents[accessedResource: MSH:D020521][accessDate: 10-05-2010]
A group of pathological conditions characterized by sudden, non-convulsive loss of neurological function due to BRAIN ISCHEMIA or INTRACRANIAL HEMORRHAGES. Stroke is classified by the type of tissue NECROSIS, such as the anatomic location, vasculature involved, etiology, age of the affected individual, and hemorrhagic vs. non-hemorrhagic nature. (From Adams et al., Principles of Neurology, 6th ed, pp777-810)
GeneRIF:15516929
GeneRIF:12871362
Cerebral Stroke[accessedResource: NIFSTD:birnlex_12783][accessDate: 10-05-2010]
GeneRIF:15178823
GeneRIF:12598732
GeneRIF:16141422
Cerebrovascular accident (disorder) [Ambiguous][accessedResource: DOID:3455][accessDate: 10-05-2010]
Acute Cerebrovascular Accident
GeneRIF:14655755
GeneRIF:15731479
NCIt:C3390
Strokes
GeneRIF:12011770
A sudden loss of neurological function secondary to hemorrhage or ischemia in the brain parenchyma due to a vascular event.[accessedResource: NCIt:C3390][accessDate: 10-05-2010]
SNOMEDCT:313267000
GeneRIF:15080888
SNOMEDCT:230690007
CVA - Cerebrovascular accident[accessedResource: SNOMEDCT:230690007][accessDate: 10-05-2010]
Cerebrovascular Stroke[accessedResource: MSH:D020521][accessDate: 10-05-2010]
GeneRIF:15673342
Stroke NOS (disorder)
CVA (cerebral vascular accident)
GeneRIF:14512079
GeneRIF:15725398
GeneRIF:15890883
GeneRIF:14753448
GeneRIF:15896953
Cerebral Stroke
GeneRIF:15159412
Cerebrovascular Apoplexya
Cerebrovascular Accidents, Acute[accessedResource: MSH:D020521][accessDate: 10-05-2010]
GeneRIF:16085363
CVA (cerebral vascular accident)[accessedResource: DOID:3455][accessDate: 10-05-2010]
GeneRIF:12140663
Cerebrovascular Accidents
GeneRIF:11935032
GeneRIF:12456385
GeneRIF:15613145
GeneRIF:14681304
GeneRIF:14961162
A group of pathological conditions characterized by sudden, non-convulsive loss of neurological function due to BRAIN ISCHEMIA or INTRACRANIAL HEMORRHAGES. Stroke is classified by the type of tissue NECROSIS, such as the anatomic location, vasculature involved, etiology, age of the affected individual, and hemorrhagic vs. non-hemorrhagic nature. (From Adams et al., Principles of Neurology, 6th ed, pp777-810)[accessedResource: MSH:D020521][accessDate: 10-05-2010]
GeneRIF:16179580
Stroke and cerebrovascular accident unspecified
NIFSTD:birnlex_12783
A sudden, nonconvulsive loss of neurologic function due to an ischemic or hemorrhagic intracranial vascular event. In general, cerebrovascular accidents are classified by anatomic location in the brain, vascular distribution, etiology, age of the affected individual, and hemorrhagic vs. nonhemorrhagic nature (MeSH).
GeneRIF:15272143
Brain Vascular Accidents[accessedResource: MSH:D020521][accessDate: 10-05-2010]
DOID:3455
GeneRIF:15891996
MSH:D020521
GeneRIF:14507642
GeneRIF:11823528
Vascular Accident, Brain[accessedResource: MSH:D020521][accessDate: 10-05-2010]
GeneRIF:14517540
GeneRIF:15567334
Stroke, Acute
GeneRIF:14753436
GeneRIF:12586134
GeneRIF:16020760
CVAs (Cerebrovascular Accident)[accessedResource: MSH:D020521][accessDate: 10-05-2010]
Apoplexy
GeneRIF:15640973
GeneRIF:15108283
GeneRIF:15914769
GeneRIF:16131798
Cerebrovascular accident (disorder)[accessedResource: SNOMEDCT:230690007][accessDate: 10-05-2010]
Cerebrovascular Strokes[accessedResource: MSH:D020521][accessDate: 10-05-2010]
Cerebrovascular accident[accessedResource: SNOMEDCT:230690007][accessDate: 10-05-2010]
CVA
Stroke and cerebrovascular accident unspecified (disorder)
GeneRIF:15701167
Cerebrovascular Stroke
GeneRIF:15576653
Stroke NOS (disorder)[accessedResource: SNOMEDCT:313267000][accessDate: 10-05-2010]
James Malone
GeneRIF:14671240
GeneRIF:12393616
SYNDROME, STROKE
GeneRIF:12038800
GeneRIF:15829914
GeneRIF:15135928
GeneRIF:16131797
GeneRIF:15947272
GeneRIF:15916851
GeneRIF:15935385
GeneRIF:12515395
GeneRIF:15341589
Cerebrovascular accident (disorder) [Ambiguous]
GeneRIF:16051899
A sudden, nonconvulsive loss of neurologic function due to an ischemic or hemorrhagic intracranial vascular event. In general, cerebrovascular accidents are classified by anatomic location in the brain, vascular distribution, etiology, age of the affected individual, and hemorrhagic vs. nonhemorrhagic nature. (From Adams et al., Principles of Neurology, 6th ed, pp777-810)
GeneRIF:11822892
GeneRIF:12006921
Apoplexy[accessedResource: NIFSTD:birnlex_12783][accessDate: 10-05-2010]
A sudden, nonconvulsive loss of neurologic function due to an ischemic or hemorrhagic intracranial vascular event. In general, cerebrovascular accidents are classified by anatomic location in the brain, vascular distribution, etiology, age of the affected individual, and hemorrhagic vs. nonhemorrhagic nature (MeSH).[accessedResource: NIFSTD:birnlex_12783][accessDate: 10-05-2010]
GeneRIF:14574075
GeneRIF:15138244
Cerebrovascular Apoplexy
GeneRIF:12907815
Cerebrovascular accident
GeneRIF:12464678
GeneRIF:15155526
GeneRIF:14643574
Stroke NOS[accessedResource: SNOMEDCT:313267000][accessDate: 10-05-2010]
GeneRIF:12947326
Brain Vascular Accidents
Cerebrovascular accident (disorder)
Cerebral Strokes
Strokes, Acute
GeneRIF:15764676
GeneRIF:14605330
GeneRIF:15861005
Strokes, Cerebrovascular
GeneRIF:15947254
CEREBROVASCULAR ACCIDENT, (CVA)
GeneRIF:15494442
Apoplexy, Cerebrovascular[accessedResource: MSH:D020521][accessDate: 10-05-2010]
SYNDROME, STROKE[accessedResource: NCIt:C3390][accessDate: 10-05-2010]
CVA[accessedResource: NCIt:C3390][accessDate: 10-05-2010]
GeneRIF:15201542
GeneRIF:15623683
GeneRIF:15790561
Stroke NOS
GeneRIF:14770184
GeneRIF:15456942
GeneRIF:15009965
GeneRIF:15894537
Cerebrovascular Apoplexya[accessedResource: NIFSTD:birnlex_12783][accessDate: 10-05-2010]
GeneRIF:14500938
GeneRIF:12123486
GeneRIF:12855940
Stroke and cerebrovascular accident unspecified (disorder)[accessedResource: DOID:3455][accessDate: 10-05-2010]
Brain Vascular Accident
GeneRIF:16237435
GeneRIF:15232611
GeneRIF:15116266
GeneRIF:15114595
GeneRIF:12843357
stroke
CVAs (Cerebrovascular Accident)
Acute Strokes[accessedResource: MSH:D020521][accessDate: 10-05-2010]
GeneRIF:12695749
GeneRIF:16051894
CVA - Cerebrovascular accident unspecified
true
A drug, solvent, chemical, etc., with a property that can be measured such as concentration.
chemical compound
Tomasz Adamusiak
James Malone
A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes.
PATO:0000384
MO_652
A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes.[accessedResource: PATO:0000384][accessDate: 10-05-2010]
Jie Zheng
James Malone
male
CARO:0000027
Tomasz Adamusiak
GeneRIF:15998773
GeneRIF:15126572
Papillary Thyroid Cancer
Papillary adenocarcinoma, NOS
Papillary adenocarcinoma[accessedResource: SNOMEDCT:4797003][accessDate: 10-05-2010]
Papillary adenocarcinoma, NOS[accessedResource: SNOMEDCT:4797003][accessDate: 10-05-2010]
GeneRIF:11786418
GeneRIF:14584755
Papillary Thyroid Gland Carcinoma[accessedResource: NCIt:C4035][accessDate: 10-05-2010]
Papillary Carcinoma of Thyroid Gland[accessedResource: NCIt:C4035][accessDate: 10-05-2010]
Papillary Cancer of the Thyroid Gland
GeneRIF:15803188
GeneRIF:12203787
Papillary Cancer of the Thyroid[accessedResource: NCIt:C4035][accessDate: 10-05-2010]
GeneRIF:15709169
NCIt:C4035
Papillary Cancer of Thyroid
A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. It is linked to radiation exposure and is the most common malignant thyroid lesion, comprising 75% to 80% of all thyroid cancers in iodine sufficient countries. Diagnostic procedures include: thyroid function tests, thyroid radioisotope scanning, thyroid ultrasound, and fine needle biopsy. Microscopically, the diagnosis is based on the distinct characteristics of the malignant cells, which include enlargement, oval shape, elongation, and overlapping of the nuclei. The nuclei also display clearing or have a ground glass appearance. Depending on the size and spread of the disease, surgical options include lobectomy, and partial or complete thyroidectomy. Adjuvant treatment options include: radioiodine therapy, TSH suppression and external radiation.
GeneRIF:16007166
Papillary carcinoma of thyroid[accessedResource: DOID:3969][accessDate: 10-05-2010]
Papillary thyroid carcinoma (disorder)
Papillary adenocarcinoma
GeneRIF:15980887
GeneRIF:12964023
Papillary adenocarcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:4797003][accessDate: 10-05-2010]
GeneRIF:12640681
James Malone
papillary thyroid carcinoma
Papillary Carcinoma of the Thyroid Gland[accessedResource: NCIt:C4035][accessDate: 10-05-2010]
Papillary Cancer of the Thyroid Gland[accessedResource: NCIt:C4035][accessDate: 10-05-2010]
Papillary Cancer of Thyroid[accessedResource: NCIt:C4035][accessDate: 10-05-2010]
Papillary Thyroid Cancer[accessedResource: NCIt:C4035][accessDate: 10-05-2010]
GeneRIF:12670889
Papillary Carcinoma of Thyroid Gland
GeneRIF:15753666
Papillary carcinoma of the Thyroid gland
GeneRIF:12819023
GeneRIF:15785240
DOID:3969
SNOMEDCT:255029007
PTC - Papillary thyroid carcinoma
GeneRIF:14568171
Papillary renal cell carcinoma
Papillary Cancer of Thyroid Gland
GeneRIF:15192042
GeneRIF:15968271
Papillary renal cell carcinoma[accessedResource: SNOMEDCT:4797003][accessDate: 10-05-2010]
GeneRIF:12720532
GeneRIF:12140756
GeneRIF:14534696
GeneRIF:12538453
Papillary Cancer of the Thyroid
GeneRIF:12193298
Papillary Carcinoma of Thyroid
Papillary Cancer of Thyroid Gland[accessedResource: NCIt:C4035][accessDate: 10-05-2010]
A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. It is linked to radiation exposure and is the most common malignant thyroid lesion, comprising 75% to 80% of all thyroid cancers in iodine sufficient countries. Diagnostic procedures include: thyroid function tests, thyroid radioisotope scanning, thyroid ultrasound, and fine needle biopsy. Microscopically, the diagnosis is based on the distinct characteristics of the malignant cells, which include enlargement, oval shape, elongation, and overlapping of the nuclei. The nuclei also display clearing or have a ground glass appearance. Depending on the size and spread of the disease, surgical options include lobectomy, and partial or complete thyroidectomy. Adjuvant treatment options include: radioiodine therapy, TSH suppression and external radiation.[accessedResource: NCIt:C4035][accessDate: 10-05-2010]
Thyroid Gland Papillary Carcinoma
SNOMEDCT:4797003
GeneRIF:15716612
GeneRIF:15785245
GeneRIF:14761598
GeneRIF:15817909
Papillary Carcinoma of the Thyroid
Papillary adenocarcinoma (morphologic abnormality)
Papillary thyroid carcinoma (disorder)[accessedResource: SNOMEDCT:255029007][accessDate: 10-05-2010]
PTC - Papillary thyroid carcinoma[accessedResource: SNOMEDCT:255029007][accessDate: 10-05-2010]
GeneRIF:15277225
GeneRIF:14532972
GeneRIF:14586073
Papillary Carcinoma of the Thyroid[accessedResource: NCIt:C4035][accessDate: 10-05-2010]
GeneRIF:11994357
NK cell[accessedResource: BTO:0000914][accessDate: 10-05-2010]
NK cell
large granular lymphocyte[accessedResource: CL:0000623][accessDate: 10-05-2010]
large granular lymphocyte
A lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells.
null cell
A lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells.[accessedResource: CL:0000623][accessDate: 10-05-2010]
A large granular lymphocyte capable of killing a tumor or microbial cell without prior exposure to the target cell and without having it presented with or marked by a histocompatibility antigen.[accessedResource: BTO:0000914][accessDate: 10-05-2010]
A large granular lymphocyte capable of killing a tumor or microbial cell without prior exposure to the target cell and without having it presented with or marked by a histocompatibility antigen.
James Malone
natural killer cell
CL:0000623
natural killer
null cell[accessedResource: CL:0000623][accessDate: 10-05-2010]
BTO:0000914
dental plate
FMAID:12516
XAO:0000431
EV:0100063
EHDAA:8009
MA:0000348
1: One of the hard bony appendages that are borne on the jaws or in many of the lower vertebrates on other bones in the walls of the mouth or pharynx and serve especially for the prehension and mastication of food and as weapons of offense and defense.n2: Any of various usually hard and sharp processes especially about the mouth of an invertebrate.[accessedResource: BTO:0000397][accessDate: 10-05-2010]
EMAPA:17938
SAEL:110
1: One of the hard bony appendages that are borne on the jaws or in many of the lower vertebrates on other bones in the walls of the mouth or pharynx and serve especially for the prehension and mastication of food and as weapons of offense and defense.n2: Any of various usually hard and sharp processes especially about the mouth of an invertebrate.
tooth
Organ with a cavity which consist of dentine and enamel. Examples: incisor, molar.[accessedResource: FMAID:12516][accessDate: 10-05-2010]
dental plates[accessedResource: ZFA:0000644][accessDate: 10-05-2010]
BTO:0000397
dental plates
Organ with a cavity which consist of dentine and enamel. Examples: incisor, molar.
James Malone
dental plate[accessedResource: ZFA:0000644][accessDate: 10-05-2010]
ZFA:0000644
ILSXISS62/TejJ
Tomasz Adamusiak
S-[2,3-bis(palmitoyloxy)-(2RS)-propyl]-[R]-cysteinyl-[S]-seryl-[S]-lysyl-[S]-lysyl-[S]-lysyl-[S]-lysine
S-[2,3-bis(palmitoyloxy)propyl]-L-cysteinyl-L-seryl-L-lysyl-L-lysyl-L-lysyl-L-lysine
http://www.ebi.ac.uk/efo/EFO_0001607
S-[2,3-bis(palmitoyloxy)propyl]-Cys-Ser-Lys-Lys-Lys-Lys
CHEBI:46889
CCCCCCCCCCCCCCCC(=O)OCC(CSC[C@H](N)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(O)=O)OC(=O)CCCCCCCCCCCCCCC
S-[2,3-bis(hexadecanoyloxy)propyl]-L-cysteinyl-L-seryl-L-lysyl-L-lysyl-L-lysyl-L-lysine
C65H126N10O12S
Pam2CSK4
InChI=1/C65H126N10O12S/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-41-58(77)86-48-51(87-59(78)42-28-26-24-22-20-18-16-14-12-10-8-6-4-2)49-88-50-52(70)60(79)75-57(47-76)64(83)73-54(38-30-34-44-67)62(81)71-53(37-29-33-43-66)61(80)72-55(39-31-35-45-68)63(82)74-56(65(84)85)40-32-36-46-69/h51-57,76H,3-50,66-70H2,1-2H3,(H,71,81)(H,72,80)(H,73,83)(H,74,82)(H,75,79)(H,84,85)/t51?,52-,53-,54-,55-,56-,57-/m0/s1/f/h71-75,84H
A diacyl lipopeptide that has formula C65H126N10O12S.
InChIKey=LJUIOEFZFQRWJG-URZMOCQLDI
NIFSTD:birnlex_535
http://www.ebi.ac.uk/efo/EFO_0002036
Drosophila melanogaster
Tomasz Adamusiak
FMAID:7280
ZFA:0001320
Layer that lines the lumen of the heart.
Tunica intima which has as its parts the endothelium of endocardium and the fibroelastic connective tissue that surrounds the cavity of a cardiac chamber.[accessedResource: FMAID:7280][accessDate: 10-05-2010]
A thin serous membrane lining the cavities of the heart.
endocardium
James Malone
MA:0000076
MAT:0000455
A thin serous membrane lining the cavities of the heart.[accessedResource: BTO:0000387][accessDate: 10-05-2010]
EMAPA:17868
BTO:0000387
Tunica intima which has as its parts the endothelium of endocardium and the fibroelastic connective tissue that surrounds the cavity of a cardiac chamber.
TAO:0001320
Layer that lines the lumen of the heart.[accessedResource: ZFA:0001320][accessDate: 10-05-2010]
EV:0100021
NB4
James Malone
MDAMB361
InChIKey=PQSUYGKTWSAVDQ-ZVIOFETBBV
A pregnane-based steroidal hormone produced by the outer-section (zona glomerulosa) of the adrenal cortex in the adrenal gland, and acts on the distal tubules and collecting ducts of the kidney to cause the conservation of sodium, secretion of potassium, increased water retention, and increased blood pressure. The overall effect of aldosterone is to increase reabsorption of ions and water in the kidney.
InChI=1/C21H28O5/c1-20-7-6-13(24)8-12(20)2-3-14-15-4-5-16(18(26)10-22)21(15,11-23)9-17(25)19(14)20/h8,11,14-17,19,22,25H,2-7,9-10H2,1H3/t14-,15-,16+,17-,19+,20-,21+/m0/s1
CHEBI:27584
C21H28O5
aldosterone
(11beta)-11,21-dihydroxy-3,20-dioxopregn-4-en-18-al
[H][C@@]1(CC[C@@]2([H])[C@]3([H])CCC4=CC(=O)CC[C@]4(C)[C@@]3([H])[C@@H](O)C[C@]12C=O)C(=O)CO
http://www.ebi.ac.uk/efo/EFO_0001479
11beta,21-dihydroxy-3,20-dioxopregn-4-en-18-al
A 18-oxo steroid that has formula C21H28O5.
DG75
James Malone
Ele Holloway
An adenocarcinoma arising from the stomach. Microscopically, it is characterized by the presence of a diffuse infiltrate, composed of individual adenocarcinoma cells or groups of adenocarcinoma cells in a fibrous or mucoid stroma. Many cells contain mucin droplets, producing a signet-ring configuration.[accessedResource: NCIt:C9159][accessDate: 10-05-2010]
Diffuse Adenocarcinoma of Stomach
NCIt:C9159
Adenocarcinoma of the Linitis Plastica Type[accessedResource: NCIt:C9159][accessDate: 10-05-2010]
Diffuse Adenocarcinoma of Stomach[accessedResource: NCIt:C9159][accessDate: 10-05-2010]
Diffuse Adenocarcinoma of the Stomach[accessedResource: NCIt:C9159][accessDate: 10-05-2010]
Diffuse Stomach Adenocarcinoma
Adenocarcinoma of Linitis Plastica Type[accessedResource: NCIt:C9159][accessDate: 10-05-2010]
diffuse gastric adenocarcinoma
Adenocarcinoma of the Linitis Plastica Type
James Malone
An adenocarcinoma arising from the stomach. Microscopically, it is characterized by the presence of a diffuse infiltrate, composed of individual adenocarcinoma cells or groups of adenocarcinoma cells in a fibrous or mucoid stroma. Many cells contain mucin droplets, producing a signet-ring configuration.
Adenocarcinoma of Linitis Plastica Type
Diffuse Stomach Adenocarcinoma[accessedResource: NCIt:C9159][accessDate: 10-05-2010]
Diffuse Adenocarcinoma of the Stomach
ZFS:0000006
cleavage 32-cell
James Malone
An instrument design is an information entity that describes the setup and design of an instrument.
instrument design
James Malone
DOID:3277
Thymic tumor
thymic neoplasm[accessedResource: DOID:3277][accessDate: 10-05-2010]
Thymic tumor[accessedResource: DOID:3277][accessDate: 10-05-2010]
neoplasm of thymus (disorder)[accessedResource: DOID:3277][accessDate: 10-05-2010]
Tomasz Adamusiak
Ele Holloway
thymus neoplasm
thymic neoplasm
neoplasm of thymus (disorder)
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#International_Unit_per_Milliliter
A unit of arbitrary substance concentration (biologic activity concentration) defined as the concentration of one international unit per one milliliter of system volume.
International Unit per milliliter
http://jaxmice.jax.org/strain/009300.html
ILSXISS24/TejJ
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158575&type=germplasm
CS57551 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158575&type=germplasm
CS57551
James Malone
mucinous carcinoma
James Malone
A triploid nutritive tissue resulting from the fusion of a haploid sperm nucleus with the two haploid polar nuclei in the ovule of angiosperms.[accessedResource: BTO:0000390][accessDate: 10-05-2010]
James Malone
GRO:0005361[accessedResource: BTO:0000390][accessDate: 10-05-2010]
PO:0009089
GRO:0005361
MAT:0000227
A triploid nutritive tissue resulting from the fusion of a haploid sperm nucleus with the two haploid polar nuclei in the ovule of angiosperms.
endosperm
BTO:0000390
A lateral outgrowth from a plant stem that is typically a flattened expanded variably shaped greenish organ, constitutes a unit of the foliage, and functions primarily in food manufacture by photosynthesis.[accessedResource: BTO:0000713][accessDate: 10-05-2010]
BTO:0000713
GRO:0005306[accessedResource: BTO:0000713][accessDate: 10-05-2010]
James Malone
ZEA:0015031
MAT:0000234
A lateral outgrowth from a plant stem that is typically a flattened expanded variably shaped greenish organ, constitutes a unit of the foliage, and functions primarily in food manufacture by photosynthesis.
leaf
PO:0009025
GRO:0005306
InChI=1/C27H29NO11/c1-10-22(31)13(28)6-17(38-10)39-15-8-27(36,16(30)9-29)7-12-19(15)26(35)21-20(24(12)33)23(32)11-4-3-5-14(37-2)18(11)25(21)34/h3-5,10,13,15,17,22,29,31,33,35-36H,6-9,28H2,1-2H3/t10-,13-,15-,17-,22+,27-/m0/s1
14-hydroxydaunorubicine
http://www.ebi.ac.uk/efo/EFO_0001527
(8S-cis)-10-((3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranosyl)oxy)-7,8,9,10-tetrahydro-6,8,11-trihydroxy-8-(hydroxyacetyl)-1-methoxy-5,12-naphthacenedione
doxorubicin
doxorubicinum
doxorubicine
14-hydroxydaunomycin
COc1cccc2C(=O)c3c(O)c4C[C@](O)(C[C@H](O[C@H]5C[C@H](N)[C@H](O)[C@H](C)O5)c4c(O)c3C(=O)c12)C(=O)CO
Adriamycin
A deoxy hexoside that has formula C27H29NO11.
InChIKey=AOJJSUZBOXZQNB-TZSSRYMLBG
(1S,3S)-3-glycoloyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside
CHEBI:28748
(1S,3S)-3,5,12-trihydroxy-3-(hydroxyacetyl)-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside
C27H29NO11
NCIt:C12843
A principal artery that originates in the aorta. It supplies blood to the muscular tissue of the heart.
A principal artery that originates in the aorta. It supplies blood to the muscular tissue of the heart.[accessedResource: NCIt:C12843][accessDate: 10-05-2010]
coronary artery
Tomasz Adamusiak
Jie Zheng
HEK293
James Malone
A human cell line derived from some renal leiomyeloblastoma
G402
James Malone
Ele Holloway
James Malone
SK-ES-1
Ele Holloway
SK ES1
MO_796
ng
A mass unit which is equal to one thousandth of one millionth of a gram or 10^[-9] g.
A microgram is a mass unit which is equal to 1 gram x 10^-9
true
http://www.ebi.ac.uk/efo/EFO_0001708
Jie Zheng
Tomasz Adamusiak
nanogram
James Malone
hematolymphoid system[accessedResource: MAT:0000022][accessDate: 10-05-2010]
hematological system[accessedResource: MAT:0000022][accessDate: 10-05-2010]
hematolymphoid system
James Malone
XAO:0000122
SAEL:48
hematological system
MAT:0000022
haemopoietic system
MA:0002434
GM12814
James Malone
CHEBI:34165
http://www.ebi.ac.uk/efo/EFO_0002485
16-ketoestradiol
James Malone
Ele Holloway
James Malone
DEL[accessedResource: ZFA:0000711][accessDate: 10-05-2010]
DEL
A multilayer of deep cells of fairly uniform thickness that forms during early epiboly (at dome stage; upon conversion of the blastodisc to the blastoderm); during gastrulation the DEL (deep cell layer) gives rise to the epiblast and hypoblast.[accessedResource: ZFA:0000711][accessDate: 10-05-2010]
A multilayer of deep cells of fairly uniform thickness that forms during early epiboly (at dome stage; upon conversion of the blastodisc to the blastoderm); during gastrulation the DEL (deep cell layer) gives rise to the epiblast and hypoblast.
deep cell layer[accessedResource: ZFA:0000711][accessDate: 10-05-2010]
ZFA:0000711
DEL cells
deep cell layer
Natural Language Generator 8th April 2010
James Malone
A101D
An a101d is a cell line.
An a101d is all of the following: something that is bearer of a melanoma, something that derives from a homo sapiens, and something that derives from a skin.
Ele Holloway
Focal Myositides[accessedResource: MSH:D009220][accessDate: 10-05-2010]
Inflammatory disorder of muscle[accessedResource: SNOMEDCT:128496001][accessDate: 10-05-2010]
Inflammation of a muscle or muscle tissue.
INFLAMM MYOPATHIES IDIOPATHIC[accessedResource: MSH:D009220][accessDate: 10-05-2010]
Myositis (disorder)[accessedResource: DOID:633][accessDate: 10-05-2010]
MSH:D009220
MUSCLE DIS INFLAMM
Inflammation of a muscle or muscle tissue.[accessedResource: MSH:D009220][accessDate: 10-05-2010]
Mylagia and myositis, unspecified[accessedResource: ICD9:729.1][accessDate: 10-05-2010]
Muscle inflammation[accessedResource: SNOMEDCT:26889001][accessDate: 10-05-2010]
Inflammatory Muscle Disease
DOID:633
Infectious Myositides[accessedResource: MSH:D009220][accessDate: 10-05-2010]
Myositis (disorder)
James Malone
Infectious Myositides
ICD9:729.1
Focal Myositis[accessedResource: MSH:D009220][accessDate: 10-05-2010]
IDIOPATHIC INFLAMM MYOPATHIES
Myositis, NOS
Myositis, Infectious
MYALGIA AND MYOSITIS NOS
An inflammatory process affecting the skeletal muscles. Causes include infections, injuries, and autoimmune disorders.[accessedResource: NCIt:C27578][accessDate: 10-05-2010]
GeneRIF:15338498
Infectious Myositis[accessedResource: MSH:D009220][accessDate: 10-05-2010]
Inflammatory disorder of muscle
SNOMEDCT:128496001
GeneRIF:12618121
Inflammatory Myopathy[accessedResource: MSH:D009220][accessDate: 10-05-2010]
Focal Myositides
Proliferative Myositis[accessedResource: MSH:D009220][accessDate: 10-05-2010]
Inflammatory disorder of muscle (disorder)
Inflammatory Muscle Diseases
Proliferative Myositides
Muscle inflammation
An inflammatory process affecting the skeletal muscles. Causes include infections, injuries, and autoimmune disorders.
Myositis, NOS[accessedResource: SNOMEDCT:26889001][accessDate: 10-05-2010]
Myopathies, Inflammatory
GeneRIF:12937135
Mylagia and myositis, unspecified
GeneRIF:12667656
GeneRIF:14569203
MUSCLE DIS INFLAMM[accessedResource: MSH:D009220][accessDate: 10-05-2010]
MYOPATHY INFLAMM[accessedResource: MSH:D009220][accessDate: 10-05-2010]
GeneRIF:16115818
Myositis unspecified (disorder)
GeneRIF:11829483
Muscle Disease, Inflammatory[accessedResource: MSH:D009220][accessDate: 10-05-2010]
INFECT MYOSITIS[accessedResource: MSH:D009220][accessDate: 10-05-2010]
Idiopathic Inflammatory Myopathies[accessedResource: MSH:D009220][accessDate: 10-05-2010]
Myositis, Focal
Idiopathic Inflammatory Myopathies
Myopathy, Idiopathic Inflammatory[accessedResource: MSH:D009220][accessDate: 10-05-2010]
Myositis unspecified[accessedResource: SNOMEDCT:203110007][accessDate: 10-05-2010]
Muscle Diseases, Inflammatory[accessedResource: MSH:D009220][accessDate: 10-05-2010]
Myositis unspecified
NCIt:C27578
GeneRIF:14741210
Myositides[accessedResource: MSH:D009220][accessDate: 10-05-2010]
Proliferative Myositis
MYOSITIS INFECT
MUSCLE/LIGAMENT DIS NOS
Myositides
Unspecified disorder of muscle, ligament, and fascia[accessedResource: ICD9:728.9][accessDate: 10-05-2010]
Inflammatory disorder of muscle (disorder)[accessedResource: DOID:633][accessDate: 10-05-2010]
Myopathy, Inflammatory
myositis
SNOMEDCT:26889001
MYALGIA AND MYOSITIS NOS[accessedResource: ICD9:729.1][accessDate: 10-05-2010]
MUSCLE/LIGAMENT DIS NOS[accessedResource: ICD9:728.9][accessDate: 10-05-2010]
SNOMEDCT:203110007
MYOPATHY INFLAMM
Myositis unspecified (disorder)[accessedResource: SNOMEDCT:203110007][accessDate: 10-05-2010]
Unspecified disorder of muscle, ligament, and fascia
Myositides, Proliferative[accessedResource: MSH:D009220][accessDate: 10-05-2010]
GeneRIF:15950936
ICD9:728.9
GeneRIF:12742663
Inflammatory Myopathies[accessedResource: MSH:D009220][accessDate: 10-05-2010]
Idiopathic Inflammatory Myopathy
MDCC-MSB1
James Malone
Fat_bodies[accessedResource: MAT:0000456][accessDate: 10-05-2010]
An adipose tissue associated with the amphibiian gonad
fat body sensu amphibia
An adipose tissue associated with the amphibiian gonad[accessedResource: MAT:0000456][accessDate: 10-05-2010]
MAT:0000456
Fat_bodies
AAO:0000157
James Malone
A time unit which is equal to 3600 seconds or 60 minutes.
http://www.ebi.ac.uk/efo/EFO_0001790
true
An hour is a derived time unit which is equal to 3600 seconds or 60 minutes.
h
hour
UO:0000032
PAC2
James Malone
pygmy chimpanzee
Bonobo
http://www.ebi.ac.uk/efo/EFO_0002650
Pan paniscus
James Malone
MO_887
time series design
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001889
CHEBI:50505
Substance that sweeten food, beverages, medications, etc.
sweetening agent
James Malone
PRIM CARDIOMYOPATHY NEC[accessedResource: ICD9:425.4][accessDate: 10-05-2010]
SNOMEDCT:85898001
Myocardial disease (disorder)
PRIM CARDIOMYOPATHY NEC
[X]Cardiomyopathy in other diseases classified elsewhere
Cardiomyopathy (disorder)[accessedResource: SNOMEDCT:85898001][accessDate: 10-05-2010]
Cardiomyopathy NOS[accessedResource: SNOMEDCT:195037005][accessDate: 10-05-2010]
Cardiomyopathy in other diseases classified elsewhere[accessedResource: ICD9:425.8][accessDate: 10-05-2010]
Other primary cardiomyopathy NOS (disorder)
Myocardial disease
Cardiomyopathy in other diseases classified elsewhere
Cardiomyopathy, NOS
Other primary cardiomyopathies[accessedResource: SNOMEDCT:195017006][accessDate: 10-05-2010]
Other primary cardiomyopathy NOS
Myocardiopathy[accessedResource: SNOMEDCT:85898001][accessDate: 10-05-2010]
SNOMEDCT:195037005
Other primary cardiomyopathy NOS (disorder)[accessedResource: SNOMEDCT:195022006][accessDate: 10-05-2010]
A disease of the heart muscle or myocardium proper. Cardiomyopathies may be classified as either primary or secondary, on the basis of etiology, or on the pathophysiology of the lesion: hypertrophic, dilated, or restrictive.
DOID:3978
ICD9:425
Myocardial Disorder
[X]Cardiomyopathy in other diseases classified elsewhere (disorder)
James Malone
ICD9:425.8
Other primary cardiomyopathies
Disorder of heart muscle
SNOMEDCT:57809008
NCIt:C34830
[X]Cardiomyopathy in other diseases classified elsewhere[accessedResource: SNOMEDCT:195580005][accessDate: 10-05-2010]
Myocardiopathy
SNOMEDCT:195022006
Other primary cardiomyopathy NOS[accessedResource: SNOMEDCT:195022006][accessDate: 10-05-2010]
Cardiomyopathy NOS (disorder)[accessedResource: SNOMEDCT:195037005][accessDate: 10-05-2010]
cardiomyopathy
CARDIOMYOPATH IN OTH DIS
Cardiomyopathy NOS (disorder)
Disorder of myocardium[accessedResource: SNOMEDCT:57809008][accessDate: 10-05-2010]
Disorder of myocardium
A disease of the heart muscle or myocardium proper. Cardiomyopathies may be classified as either primary or secondary, on the basis of etiology, or on the pathophysiology of the lesion: hypertrophic, dilated, or restrictive.[accessedResource: NCIt:C34830][accessDate: 10-05-2010]
Myocardiopathy, NOS[accessedResource: SNOMEDCT:85898001][accessDate: 10-05-2010]
Myocardial disease, NOS
Myocardial disease (disorder)[accessedResource: SNOMEDCT:57809008][accessDate: 10-05-2010]
SNOMEDCT:195580005
Myocardiopathy, NOS
[X]Cardiomyopathy in other diseases classified elsewhere (disorder)[accessedResource: SNOMEDCT:195580005][accessDate: 10-05-2010]
Myocardial disease[accessedResource: SNOMEDCT:57809008][accessDate: 10-05-2010]
NCIt:C35544
CARDIOMYOPATH IN OTH DIS[accessedResource: ICD9:425.8][accessDate: 10-05-2010]
Cardiomyopathy (disorder)
ICD9:425.4
SNOMEDCT:195017006
Other primary cardiomyopathies (disorder)[accessedResource: SNOMEDCT:195017006][accessDate: 10-05-2010]
Myocardial disease, NOS[accessedResource: SNOMEDCT:57809008][accessDate: 10-05-2010]
Disorder of heart muscle[accessedResource: SNOMEDCT:57809008][accessDate: 10-05-2010]
Other primary cardiomyopathies (disorder)
cm
James Malone
http://www.ebi.ac.uk/efo/EFO_0001720
true
Jie Zheng
A length unit which is equal to one hundredth of a meter or 10^[-2] m.
Tomasz Adamusiak
centimeter
A centimeter is a length unit which is equal to one hundredth of a meter or 10^-2 m.
centimetre
MO_837
GM12145
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158640&type=germplasm
CS57616 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158640&type=germplasm
CS57616
James Malone
MAT:0000312
James Malone
FMAID:14546
transverse colon
BTO:0000272
The portion of the colon that runs transversely across the upper part of the abdomen, from the right to the left colic flexure.[accessedResource: BTO:0000272][accessDate: 10-05-2010]
The portion of the colon that runs transversely across the upper part of the abdomen, from the right to the left colic flexure.
erythroblastoid cell line
http://www.ebi.ac.uk/efo/EFO_0002489
5-fluorouridine
James Malone
Ele Holloway
Tomasz Adamusiak
NIFSTD:birnlex_2087
MO_192
The observable form taken by some character (or group of characters) in an individual or an organism, excluding pathology and disease. The detectable outward manifestations of a specific genotype.
phenotype
Tomasz Adamusiak
Jie Zheng
James Malone
MO_952
A biological replicate is a replicate role that consists of independent biological replicates made from different individual BioSources.
biological replicate
James Malone
SNU475
James Malone
Ele Holloway
Ele Holloway
James Malone
Lu135
Lu-135
JCRB0170
SHEP-SF
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0001699
A derived unit which represents a standard measurement of temperature in a particular temperature scale.
true
UO:0000126
A dervied temperature unit is a derived unit which represents a standard measurement of temperature in a particular temperature scale.
James Malone
derived temperature unit
limb sensu vertebrata
James Malone
EMAPA:16405
XAO:0003027
vertebrata limb
limb
Cardinal body part, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with a complete set of bones of the appendicular skeleton, it is partially surrounded by skin of limb. Examples: There are only four instances, right upper and lower limbs and left upper and lower limbs.
EHDAA:1697
limb[accessedResource: MAT:0000090][accessDate: 10-05-2010]
limb sensu vertebrata[accessedResource: MAT:0000090][accessDate: 10-05-2010]
MA:0000007
Extremity[accessedResource: FMAID:7182][accessDate: 10-05-2010]
vertebrate limb
FMAID:7182
EV:0100483
MAT:0000090
Cardinal body part, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with a complete set of bones of the appendicular skeleton, it is partially surrounded by skin of limb. Examples: There are only four instances, right upper and lower limbs and left upper and lower limbs.[accessedResource: FMAID:7182][accessDate: 10-05-2010]
Extremity
James Malone
Invasive Duct and Lobular Carcinoma[accessedResource: NCIt:C7688][accessDate: 10-05-2010]
Invasive duct and Lobular carcinoma
NCIt:C7688
An invasive ductal breast carcinoma associated with a lobular carcinomatous component. The lobular carcinomatous component may be in situ or invasive.[accessedResource: NCIt:C7688][accessDate: 10-05-2010]
invasive ductal and lobular carcinoma
DOID:6583
Infiltrating Ductal and Lobular Carcinoma[accessedResource: NCIt:C7688][accessDate: 10-05-2010]
Infiltrating Ductal and Lobular Carcinoma
An invasive ductal breast carcinoma associated with a lobular carcinomatous component. The lobular carcinomatous component may be in situ or invasive.
http://www.ebi.ac.uk/efo/EFO_0001842
CHEBI:35493
A drug that prevents or reduces fever by lowering the body temperature from a raised state. An antipyretic will not affect the normal body temperature if one does not have fever. Antipyretics cause the hypothalamus to override an interleukin-induced increase in temperature. The body will then work to lower the temperature and the result is a reduction in fever.
antipyretic
James Malone
SW954
James Malone
Ele Holloway
Blei
A carbon group element that has formula Pb.
InChIKey=WABPQHHGFIMREM-UHFFFAOYAT
Ele Holloway
plomo
plumbum
lead atom
82Pb
http://www.ebi.ac.uk/efo/EFO_0002412
InChI=1/Pb
CHEBI:25016
James Malone
A carbon group element atom that has formula Pb.
[Pb]
plomb
lead
http://jaxmice.jax.org/strain/009316.html
ILSXISS80/TejJ
Tomasz Adamusiak
GeneRIF:12707035
RCC
Renal Cell Adenocarcinomas
GeneRIF:15945081
GeneRIF:12584564
Adenocarcinoma of Kidney
Clear Cell Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinoma, Collecting Duct (Kidney)
Clear cell carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
GeneRIF:15502805
GeneRIF:14696115
GeneRIF:15893810
Clear Cell Renal Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:14517280
GeneRIF:15998523
GeneRIF:16213477
Tumor, Grawitz[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Sarcomatoid Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:15145526
GeneRIF:12695553
Papillary Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:15273700
A carcinoma arising from the renal parenchyma. The incidence of renal cell carcinoma has increased by 35% from 1973 to 1991. There is a strong correlation between cigarette smoking and the development of renal cell carcinoma. The clinical presentation includes : hematuria, flank pain and a palpable lumbar mass. A high percentage of renal cell carcinomas are diagnosed when an ultrasound is performed for other purposes. Diagnostic procedures include: ultra sound, intravenous pyelography and computed tomography (CT). Radical nephrectomy is the standard intervention procedure. Renal cell carcinoma is generally considered to be resistant to radiation treatment and chemotherapy.
Adenocarcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
GeneRIF:16061872
GeneRIF:12036906
GeneRIF:15809750
GeneRIF:14559244
GeneRIF:15930277
Renal Cell Carcinoma, Stage Unspecified[accessedResource: NCIt:C9385][accessDate: 10-05-2010]
GeneRIF:12496483
Carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
GeneRIF:12963978
DOID:4450
renal cell cancer
GeneRIF:15247770
Clear Cell Renal Cell Carcinoma
GeneRIF:12736050
NCIt:C9385
Renal cell carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:41607009][accessDate: 10-05-2010]
Nephroid Carcinomas
GeneRIF:12209602
Renal Cell Adenocarcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Sarcomatoid Renal Cell Carcinoma
Hypernephroma (disorder)
GeneRIF:15780567
GeneRIF:16221209
Carcinomas, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Adenocarcinoma of the Kidney
Hypernephroma[accessedResource: SNOMEDCT:188251003][accessDate: 10-05-2010]
GeneRIF:12016154
GeneRIF:15375503
GeneRIF:15671550
GeneRIF:12845675
GeneRIF:14666709
GeneRIF:14648699
GeneRIF:15358199
GeneRIF:15985433
Collecting Duct Carcinomas (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:14565870
Renal cell carcinoma - morphology[accessedResource: SNOMEDCT:41607009][accessDate: 10-05-2010]
GeneRIF:12025227
GeneRIF:15701841
GeneRIF:12750296
GeneRIF:11865300
GeneRIF:12697836
GeneRIF:15569051
GeneRIF:15900605
GeneRIF:11840338
GeneRIF:11597145
GeneRIF:16145471
GeneRIF:12684625
GeneRIF:15086915
GeneRIF:12375029
GeneRIF:11759057
GeneRIF:15826766
GeneRIF:12766581
GeneRIF:16244585
GeneRIF:12208877
GeneRIF:12474536
Duct Carcinoma, Collecting (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephroid Carcinomas
GeneRIF:15791570
GeneRIF:12631591
Clear cell carcinoma of kidney (disorder)
GeneRIF:14663360
renal cell carcinoma (morphologic abnormality)
Adenocarcinoma, Renal Cell
GeneRIF:11721640
GeneRIF:14981908
GeneRIF:12874014
GeneRIF:16157291
GeneRIF:15245963
Clear Cell Renal Carcinoma
Hypernephroma
GeneRIF:12402975
GeneRIF:12209956
GeneRIF:14534724
GeneRIF:14712483
GeneRIF:16015044
Hypernephromas
Grawitz tumour[accessedResource: SNOMEDCT:41607009][accessDate: 10-05-2010]
GeneRIF:15107966
GeneRIF:11920465
Clear cell carcinoma of kidney (disorder)[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
MSH:D002292
GeneRIF:15665272
Kidney Adenocarcinoma
Hypernephroid Carcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophobe Renal Cell Carcinoma
GeneRIF:12708469
GeneRIF:14676131
GeneRIF:11749694
RCC[accessedResource: NCIt:C9385][accessDate: 10-05-2010]
renal cell carcinoma
GeneRIF:15198927
Hypernephroma (disorder)[accessedResource: SNOMEDCT:188251003][accessDate: 10-05-2010]
GeneRIF:15319295
GeneRIF:11712081
GeneRIF:14519627
Grawitz tumour
GeneRIF:14520461
Carcinomas, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Cell Cancer[accessedResource: NCIt:C9385][accessDate: 10-05-2010]
GeneRIF:12452054
GeneRIF:12646256
GeneRIF:15350301
GeneRIF:12781449
GeneRIF:15709180
A carcinoma arising from the renal parenchyma. The incidence of renal cell carcinoma has increased by 35% from 1973 to 1991. There is a strong correlation between cigarette smoking and the development of renal cell carcinoma. The clinical presentation includes : hematuria, flank pain and a palpable lumbar mass. A high percentage of renal cell carcinomas are diagnosed when an ultrasound is performed for other purposes. Diagnostic procedures include: ultra sound, intravenous pyelography and computed tomography (CT). Radical nephrectomy is the standard intervention procedure. Renal cell carcinoma is generally considered to be resistant to radiation treatment and chemotherapy.[accessedResource: NCIt:C9385][accessDate: 10-05-2010]
GeneRIF:15578072
Papillary Renal Cell Carcinoma
GeneRIF:15086466
Tumor, Grawitz
GeneRIF:15448019
Renal cell carcinoma - morphology
GeneRIF:12115583
GeneRIF:15608669
GeneRIF:14559790
Renal Cell Carcinoma, Stage Unspecified
GeneRIF:12496484
GeneRIF:15285879
SNOMEDCT:254915003
Hypernephroid Carcinoma
GeneRIF:16254461
GeneRIF:11921283
GeneRIF:14693268
GeneRIF:12207901
GeneRIF:12970754
Carcinomas, Collecting Duct (Kidney)
GeneRIF:15300849
GeneRIF:16164647
GeneRIF:15365652
James Malone
GeneRIF:16237213
Carcinoma, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:15661050
Renal Cell Carcinomas
Adenocarcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:16077991
GeneRIF:15274119
GeneRIF:12640117
GeneRIF:12770739
GeneRIF:16210641
SNOMEDCT:41607009
Chromophobe Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.
Carcinoma of kidney
Hypernephroid Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:11896565
Carcinoma, Nephroid
GeneRIF:11714447
GeneRIF:12594819
GeneRIF:15102668
Clear cell carcinoma of kidney
GeneRIF:15867365
GeneRIF:12692265
GeneRIF:15747097
Hypernephromas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:15217953
GeneRIF:12597245
Kidney Adenocarcinoma[accessedResource: NCIt:C9385][accessDate: 10-05-2010]
GeneRIF:15906349
SNOMEDCT:188251003
GeneRIF:12893366
GeneRIF:14612902
Adenocarcinoma of the Kidney[accessedResource: NCIt:C9385][accessDate: 10-05-2010]
g/L
James Malone
http://www.ebi.ac.uk/efo/EFO_0001810
A mass unit density which is equal to mass of an object in grams divided by the volume in liters.
true
A gram per liter is a density unit which is equal to mass of an object in grams divided by the volume in liters.
gram per liter
UO:0000175
T3M4
Panc89
James Malone
Ele Holloway
GM06994
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158825&type=germplasm
CS57801 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158825&type=germplasm
CS57801
James Malone
NCCNCCNCCNCCN
3,6,9-triazaundecamethylenediamine
InChIKey=FAGUFWYHJQFNRV-UHFFFAOYAH
A polyazaalkane that has formula C8H23N5.
CHEBI:49798
tetraethylenepentamine
tetren
N-(2-aminoethyl)-N'-[2-[(2-aminoethyl)amino]ethyl]-1,2-ethanediamine
TEPA
http://www.ebi.ac.uk/efo/EFO_0001623
C8H23N5
3,6,9-triazaundecane-1,11-diamine
1,4,7,10,13-pentaazatridecane
1,11-Diamino-3,6,9-triazaundecane
InChI=1/C8H23N5/c9-1-3-11-5-7-13-8-6-12-4-2-10/h11-13H,1-10H2
N-(2-aminoethyl)-N'-{2-[(2-aminoethyl)amino]ethyl}ethane-1,2-diamine
Tetraethylenpentamin
FBbt:00004482
The fused compact cephalic plates that comprise the head, excluding the eyes, antennae and mouthparts.
The fused compact cephalic plates that comprise the head, excluding the eyes, antennae and mouthparts.[accessedResource: FBbt:00004482][accessDate: 10-05-2010]
head capsule
James Malone
EcR-RKO/KLF4
Ele Holloway
James Malone
malignant peripheral nerve sheath tumor (disorder)[accessedResource: DOID:5940][accessDate: 10-05-2010]
Peripheral Nerve Sheath Tumors[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Nerve Sheath Neoplasms[accessedResource: MSH:D018317][accessDate: 10-05-2010]
GeneRIF:12782393
Malignant Neoplasm of Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
Neoplasms which arise from nerve sheaths formed by SCHWANN CELLS in the PERIPHERAL NERVOUS SYSTEM or by OLIGODENDROCYTES in the CENTRAL NERVOUS SYSTEM. Malignant peripheral nerve sheath tumors, NEUROFIBROMA, and NEURILEMMOMA are relatively common tumors in this category.
DOID:5940
GeneRIF:12660952
Perineuriomas[accessedResource: MSH:D018317][accessDate: 10-05-2010]
malignant peripheral nerve sheath tumor (morphologic abnormality)[accessedResource: DOID:5940][accessDate: 10-05-2010]
Melanotic MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Neurosarcoma [obs]
Malignant Schwannoma[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
Neoplasm, Nerve Sheath
Malignant Neurilemmoma[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
Malignant Peripheral Nerve Sheath Neoplasm[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
malignant neoplasm of the peripheral nerve Sheath[accessedResource: DOID:5940][accessDate: 10-05-2010]
MPNSTs
Tumors of the Nerve Sheath
Epithelioid MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Malignant schwannoma
NERVE SHEATH NEOPL
Tumors of the Nerve Sheath[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Malignant Neurilemoma[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
NCIt:C3798
Neurosarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Melanotic psammomatous MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
GeneRIF:12152785
MPNST - Malignant peripheral nerve sheath tumor[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Neurofibrosarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Neurogenic sarcoma [obs]
Malignant Tumor of the Peripheral Nerve Sheath
Malignant peripheral nerve sheath tumor (disorder)
NEOPL NERVE SHEATH[accessedResource: MSH:D018317][accessDate: 10-05-2010]
MPNST - Malignant peripheral nerve sheath tumour[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Nerve Sheath Neoplasm[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Neurofibrosarcoma [obs]
James Malone
Malignant Tumor of Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
Nerve Sheath Tumors[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Malignant Neoplasm of Peripheral Nerve Sheath
Neurofibrosarcoma
malignant neoplasm of the peripheral nerve Sheath
Peripheral Nerve Sheath Tumors, Malignant[accessedResource: MSH:D018317][accessDate: 10-05-2010]
An uncommon, highly aggressive malignant tumor, arising from the peripheral nerves and affecting mostly adults in their third to sixth decades of life. It usually occurs in medium-sized and large nerves of the buttock, thigh, upper arm, or the paraspinal region. It may be associated with neurofibromatosis 1 (NF1).
An uncommon, highly aggressive malignant tumor, arising from the peripheral nerves and affecting mostly adults in their third to sixth decades of life. It usually occurs in medium-sized and large nerves of the buttock, thigh, upper arm, or the paraspinal region. It may be associated with neurofibromatosis 1 (NF1).[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
MPNST with mesenchymal differentiation[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
MPNST - Malignant peripheral nerve sheath tumor
Neurogenic sarcoma[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Neurosarcoma[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
GeneRIF:14991838
MPNST with mesenchymal differentiation
GeneRIF:11642720
Malignant Tumor of Peripheral Nerve Sheath
Malignant Peripheral Nerve Sheath Neoplasm
Peripheral Nerve Sheath Tumors
Neurosarcoma
MPNST - Malignant peripheral nerve sheath tumour
Neurofibrosarcoma[accessedResource: SNOMEDCT:404037002][accessDate: 10-05-2010]
malignant peripheral nerve sheath tumor [dup] (morphologic abnormality)[accessedResource: DOID:5940][accessDate: 10-05-2010]
Melanotic MPNST
Perineurioma[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Nerve Sheath Neoplasms
SNOMEDCT:19897006
GeneRIF:14519636
MPNST
Perineuriomas
MPNST[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Malignant Neurilemmoma
Peripheral Nerve Sheath Tumors, Malignant
Epithelioid MPNST
Malignant Tumor of the Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
GeneRIF:12917360
Neurogenic sarcoma
MPNST with glandular differentiation[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Neurogenic sarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
MPNST with glandular differentiation
SNOMEDCT:404037002
Malignant peripheral nerve sheath tumor [dup] (morphologic abnormality)
malignant peripheral nerve sheath tumor
MPNSTs[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Melanotic psammomatous MPNST
Malignant Neurilemoma
Perineurioma
Malignant Peripheral Nerve Sheath Tumour
Neoplasms which arise from nerve sheaths formed by SCHWANN CELLS in the PERIPHERAL NERVOUS SYSTEM or by OLIGODENDROCYTES in the CENTRAL NERVOUS SYSTEM. Malignant peripheral nerve sheath tumors, NEUROFIBROMA, and NEURILEMMOMA are relatively common tumors in this category.[accessedResource: MSH:D018317][accessDate: 10-05-2010]
MSH:D018317
GeneRIF:12730955
Nerve Sheath Tumors
Malignant peripheral nerve sheath tumour[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Malignant peripheral nerve sheath tumor (morphologic abnormality)
http://jaxmice.jax.org/strain/009270.html
ILSXISS48/TejJ
Tomasz Adamusiak
FBbt:00001719
embryonic corpus allatum
James Malone
CL:0000617
GABAergic neuron
James Malone
splanchopleura[accessedResource: FBbt:00017015][accessDate: 10-05-2010]
circular visceral muscle precursor
Primordium of the circular visceral muscle of the trunk. Becomes distinct from the rest of the trunk mesoderm by stage 11 when two distinct layers of trunk mesoderm are apparent, the inner of which is the circular visceral muscle primordium. By stage 12, these cells form a palisade consisting of a dorsal row an a ventral row of tightly packed cells. These cells adhere to the anterior and posterior midgut rudiments as they extend. During dorsal closure they spread out to encircle the midgut.[accessedResource: FBbt:00017015][accessDate: 10-05-2010]
P1 ViMus
circular visceral muscle primordium[accessedResource: FBbt:00017015][accessDate: 10-05-2010]
circular visceral muscle primordium
splanchopleura
Primordium of the circular visceral muscle of the trunk. Becomes distinct from the rest of the trunk mesoderm by stage 11 when 2 distinct layers of trunk mesoderm are apparent, the inner of which is the circular visceral muscle primordium. By stage 12, these cells form a palisade consisting of a dorsal row an a ventral row of tightly packed cells. These cells adhere to the anterior and posterior midgut rudiments as they extend. During dorsal closure they spread out to encircle the midgut.
Primordium of the circular visceral muscle of the trunk. Becomes distinct from the rest of the trunk mesoderm by stage 11 when two distinct layers of trunk mesoderm are apparent, the inner of which is the circular visceral muscle primordium. By stage 12, these cells form a palisade consisting of a dorsal row an a ventral row of tightly packed cells. These cells adhere to the anterior and posterior midgut rudiments as they extend. During dorsal closure they spread out to encircle the midgut.
P1 ViMus[accessedResource: FBbt:00017015][accessDate: 10-05-2010]
James Malone
FBbt:00017015
circular visceral muscle precursor[accessedResource: FBbt:00017015][accessDate: 10-05-2010]
circular visceral mesoderm primordium
NCIt:C45702
An epithelial cell located in the inner portion of the thymus where the T lymphocytes become mature and are released into the circulation.
An epithelial cell located in the inner portion of the thymus where the T lymphocytes become mature and are released into the circulation.[accessedResource: NCIt:C45702][accessDate: 10-05-2010]
medullary thymic epithelial cell
James Malone
FBbt:00005667
embryonic central brain pars intercerebralis
James Malone
carotid artery endothelium
Tomasz Adamusiak
Jie Zheng
HT-1197
HT1197
HT 1197
James Malone
Ele Holloway
DNA sequencing
An assay in which -sequencing technology (e.g. Solexa/454) is used to determine NDNA sequence
DNA-seq
ArrayExpress Production Team
germ cell tumor (disorder)
GeneRIF:15467433
MSH:D009373
GeneRIF:16188233
Neoplasms, Germ Cell and Embryonic[accessedResource: MSH:D009373][accessDate: 10-05-2010]
[M]Germ cell neoplasms (morphologic abnormality)[accessedResource: SNOMEDCT:189839002][accessDate: 10-05-2010]
Germinoma (morphologic abnormality)[accessedResource: SNOMEDCT:28307001][accessDate: 10-05-2010]
GeneRIF:12163388
Germ cell neoplasms (morphologic abnormality)
GERM CELL EMBRYONAL NEOPL
A cancer that is derived from germ cells.
Germ Cell Tumors
[M]Germ cell neoplasms (morphologic abnormality)
GeneRIF:15491742
GeneRIF:15896468
Tumor of the Germ Cell
Embryonal Neoplasms
malignant tumor of the germ cell
Neoplasms, Germ Cell
Germinoma[accessedResource: SNOMEDCT:28307001][accessDate: 10-05-2010]
Neoplasms, Germ Cell and Embryonal[accessedResource: MSH:D009373][accessDate: 10-05-2010]
NEOPL GERM CELL EMBRYONIC[accessedResource: MSH:D009373][accessDate: 10-05-2010]
germ cell neoplasm NOS (morphologic abnormality)[accessedResource: DOID:2994][accessDate: 10-05-2010]
Cancer, Embryonal
Neoplasms, Embryonal and Mixed[accessedResource: MSH:D009373][accessDate: 10-05-2010]
GeneRIF:12736724
SNOMEDCT:189839002
Germ Cell and Embryonal Neoplasms
Germ cell neoplasm NOS (morphologic abnormality)
Neoplasms composed of primordial GERM CELLS of embryonic GONADS or of elements of the germ layers of the EMBRYO, MAMMALIAN. The concept does not refer to neoplasms located in the gonads or present in an embryo or FETUS.[accessedResource: MSH:D009373][accessDate: 10-05-2010]
Germ cell tumor, NOS[accessedResource: SNOMEDCT:28307001][accessDate: 10-05-2010]
Neoplasm of Germ Cell
[M]Germ cell neoplasm NOS (morphologic abnormality)
germ cell tumor
Neoplasm, Embryonal[accessedResource: MSH:D009373][accessDate: 10-05-2010]
Cancer, Embryonal and Mixed[accessedResource: MSH:D009373][accessDate: 10-05-2010]
germ cell tumour[accessedResource: DOID:2994][accessDate: 10-05-2010]
NEOPL EMBRYONAL[accessedResource: MSH:D009373][accessDate: 10-05-2010]
Cancer, Embryonal and Mixed
[M]Germ cell neoplasm NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189854008][accessDate: 10-05-2010]
Germ Cell Cancers[accessedResource: MSH:D009373][accessDate: 10-05-2010]
Germ cell neoplasm (morphologic abnormality)
[M]Germ cell neoplasms[accessedResource: SNOMEDCT:189839002][accessDate: 10-05-2010]
GeneRIF:14633588
Neoplasm, Embryonal
Tumor of Germ Cell[accessedResource: NCIt:C3708][accessDate: 10-05-2010]
James Malone
Neoplasm of the Germ Cell
GeneRIF:14555521
Germ cell neoplasm
GeneRIF:12629412
GeneRIF:12727846
GeneRIF:12824871
GeneRIF:15691383
Neoplasms, Embryonal and Mixed
Neoplasms composed of primordial GERM CELLS of embryonic GONADS or of elements of the germ layers of the EMBRYO, MAMMALIAN. The concept does not refer to neoplasms located in the gonads or present in an embryo or FETUS.
NEOPL GERM CELL
Tumors, Germ Cell[accessedResource: MSH:D009373][accessDate: 10-05-2010]
Germ cell tumor, NOS
Germinoma (morphologic abnormality)
Germ Cell Cancer[accessedResource: MSH:D009373][accessDate: 10-05-2010]
Germ Cell Cancers
GeneRIF:15982323
Tumor of Germ Cell
Embryonal Neoplasms[accessedResource: MSH:D009373][accessDate: 10-05-2010]
GeneRIF:12777997
NEOPL GERM CELL EMBRYONIC
germ cell neoplasm (morphologic abnormality)[accessedResource: DOID:2994][accessDate: 10-05-2010]
NEOPL GERM CELL EMBRYONAL[accessedResource: MSH:D009373][accessDate: 10-05-2010]
Tumor of the Germ Cell[accessedResource: NCIt:C3708][accessDate: 10-05-2010]
SNOMEDCT:402878003
malignant tumor of the germ cell[accessedResource: DOID:2994][accessDate: 10-05-2010]
[M]Germ cell neoplasms
[M]Germ cell neoplasm NOS[accessedResource: SNOMEDCT:189854008][accessDate: 10-05-2010]
SNOMEDCT:28307001
Germ cell tumor (disorder)[accessedResource: SNOMEDCT:402878003][accessDate: 10-05-2010]
NCIt:C3708
Germinoma
Germ cell neoplasm[accessedResource: SNOMEDCT:115233005][accessDate: 10-05-2010]
Neoplasm of the Germ Cell[accessedResource: NCIt:C3708][accessDate: 10-05-2010]
A cancer that is derived from germ cells.[accessedResource: DOID:2994][accessDate: 10-05-2010]
Germ Cell Neoplasms[accessedResource: NCIt:C3708][accessDate: 10-05-2010]
GeneRIF:12620992
DOID:2994
Cancer, Embryonal[accessedResource: MSH:D009373][accessDate: 10-05-2010]
[M]Germ cell neoplasm NOS
germ cell tumour
Neoplasm of Germ Cell[accessedResource: NCIt:C3708][accessDate: 10-05-2010]
SNOMEDCT:115233005
Cancers, Embryonal[accessedResource: MSH:D009373][accessDate: 10-05-2010]
EMBRYONAL NEOPL
Germ Cell and Embryonic Neoplasms
NEOPL GERM CELL[accessedResource: MSH:D009373][accessDate: 10-05-2010]
Embryonal Cancers
GeneRIF:15330164
SNOMEDCT:189854008
germ cell cancer
Hypertrophy is the increase in the volume of an organ or tissue due to the enlargement of its component cells.
hypertrophy
James Malone
Malignant lymphoma (clinical)
A malignant (clonal) proliferation of B- lymphocytes or T- lymphocytes which involves the lymph nodes, bone marrow and/or extranodal sites. This category includes Non-Hodgkin lymphomas and Hodgkin lymphomas.[accessedResource: NCIt:C3208][accessDate: 10-05-2010]
GeneRIF:15889157
GeneRIF:12549480
GeneRIF:14998493
GeneRIF:15692060
GeneRIF:14654791
GeneRIF:15640350
GeneRIF:15263076
GeneRIF:12082638
A general term for various neoplastic diseases of the lymphoid tissue.
GeneRIF:12496417
GeneRIF:14702288
A malignant (clonal) proliferation of B- lymphocytes or T- lymphocytes which involves the lymph nodes, bone marrow and/or extranodal sites. This category includes Non-Hodgkin lymphomas and Hodgkin lymphomas.
GeneRIF:15744340
Malignant lymphoma NOS of unspecified site
GeneRIF:12884297
Germinoblastic Sarcomas
Microglioma [obs]
Malignant lymphoma, no ICD-O subtype
SNOMEDCT:118600007
GeneRIF:15743832
GeneRIF:15940251
A cancer that affects lymphocytes that reside in the lymphatic system and in blood-forming organs.
Lymphoma, NOS[accessedResource: SNOMEDCT:21964009][accessDate: 10-05-2010]
Malignant lymphoma[accessedResource: SNOMEDCT:21964009][accessDate: 10-05-2010]
Lymphomas, Malignant
GeneRIF:15226424
GeneRIF:15133473
Malignant lymphoma NOS (disorder)[accessedResource: SNOMEDCT:188694002][accessDate: 10-05-2010]
GeneRIF:12688322
GeneRIF:12915884
GeneRIF:15356104
GeneRIF:12393693
Germinoblastomas
GeneRIF:12469325
GeneRIF:15668399
SNOMEDCT:188694002
GeneRIF:12145697
GeneRIF:12438221
Malignant lymphoma, NOS
GeneRIF:12555065
This is potentially too broad as well as overlaps with leukemia and should be obsoleted.
Malignant lymphoma NOS of unspecified site[accessedResource: SNOMEDCT:188695001][accessDate: 10-05-2010]
GeneRIF:15890690
Malignant lymphoma, NOS[accessedResource: SNOMEDCT:21964009][accessDate: 10-05-2010]
GeneRIF:15551285
Sarcoma, Germinoblastic
GeneRIF:12539045
GeneRIF:12217802
GeneRIF:11720250
Microglioma [obs][accessedResource: SNOMEDCT:21964009][accessDate: 10-05-2010]
GeneRIF:14612522
GeneRIF:12569164
Lymphoma (Hodgkin's and Non-Hodgkin's)
Malignant lymphoma (clinical)[accessedResource: SNOMEDCT:118600007][accessDate: 10-05-2010]
GeneRIF:11937265
GeneRIF:12048235
malignant lymphoma (disorder)[accessedResource: DOID:353][accessDate: 10-05-2010]
Lymphoma (Hodgkin's and Non-Hodgkin's)[accessedResource: DOID:353][accessDate: 10-05-2010]
GeneRIF:12532453
GeneRIF:15735694
Lymphoma (clinical)
GeneRIF:15562971
GeneRIF:14666612
GeneRIF:11985791
malignant lymphoma NOS (disorder)
GeneRIF:15265020
GeneRIF:14767575
Lymphomas[accessedResource: MSH:D008223][accessDate: 10-05-2010]
GeneRIF:15713979
Lymphomas
NCIt:C3208
GeneRIF:12351407
GeneRIF:11999550
Reticulolymphosarcoma NOS
GeneRIF:15467748
A cancer that affects lymphocytes that reside in the lymphatic system and in blood-forming organs.[accessedResource: DOID:353][accessDate: 10-05-2010]
DOID:353
Malignant lymphoma NOS of unspecified site (disorder)
Lymphoma (clinical)[accessedResource: SNOMEDCT:118600007][accessDate: 10-05-2010]
GeneRIF:15215324
Lymphoma (Non-Hodgkin)
Sarcomas, Germinoblastic[accessedResource: MSH:D008223][accessDate: 10-05-2010]
SNOMEDCT:21964009
GeneRIF:15985538
GeneRIF:15325703
GeneRIF:15677569
Lymphoma (Hodgkin and Non-Hodgkin)[accessedResource: NCIt:C3208][accessDate: 10-05-2010]
GeneRIF:14724650
GeneRIF:12721791
GeneRIF:12532332
GeneRIF:11932403
Lymphomas, Malignant[accessedResource: MSH:D008223][accessDate: 10-05-2010]
GeneRIF:15474489
Reticulolymphosarcoma
GeneRIF:11920179
Malignant lymphoma
Sarcoma, Germinoblastic[accessedResource: MSH:D008223][accessDate: 10-05-2010]
GeneRIF:16108830
GeneRIF:11751994
GeneRIF:12149433
Malignant lymphoma, no ICD-O subtype[accessedResource: SNOMEDCT:21964009][accessDate: 10-05-2010]
GeneRIF:15522957
Malignant lymphoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:21964009][accessDate: 10-05-2010]
GeneRIF:12567186
GeneRIF:12218099
GeneRIF:14691303
GeneRIF:15705798
malignant lymphoma, no ICD-O subtype (morphologic abnormality)
A general term for various neoplastic diseases of the lymphoid tissue.[accessedResource: MSH:D008223][accessDate: 10-05-2010]
GeneRIF:15126346
GeneRIF:12807718
GeneRIF:15223017
James Malone
GeneRIF:11836626
GeneRIF:11869933
SNOMEDCT:188695001
Germinoblastoma
GeneRIF:15516976
GeneRIF:16201318
GeneRIF:12208847
GeneRIF:12897143
Germinoblastoma[accessedResource: MSH:D008223][accessDate: 10-05-2010]
lymphoma
GeneRIF:15649253
GeneRIF:12967477
GeneRIF:12682649
GeneRIF:15902285
GeneRIF:15569983
Reticulolymphosarcoma NOS[accessedResource: DOID:353][accessDate: 10-05-2010]
Reticulolymphosarcomas[accessedResource: MSH:D008223][accessDate: 10-05-2010]
GeneRIF:15121848
GeneRIF:16194892
GeneRIF:14662861
Lymphoma, NOS
Reticulolymphosarcoma[accessedResource: MSH:D008223][accessDate: 10-05-2010]
GeneRIF:15160902
GeneRIF:11866986
GeneRIF:15716988
GeneRIF:15762053
malignant lymphoma (disorder)
GeneRIF:16277027
GeneRIF:12604405
MSH:D008223
GeneRIF:12579309
Reticulolymphosarcomas
malignant lymphoma NOS of unspecified site (disorder)[accessedResource: DOID:353][accessDate: 10-05-2010]
Germinoblastomas[accessedResource: MSH:D008223][accessDate: 10-05-2010]
NCIH1694
James Malone
Ele Holloway
alveolus
Ele Holloway
Bronchial Alveolus[accessedResource: C12986][accessDate: 10-05-2010]
Alveoli[accessedResource: C12986][accessDate: 10-05-2010]
Bronchial Alveolus
James Malone
C12986
Alveoli
MDAMB157
MDAMB-157
James Malone
1.8
true
obsolete_HepG2
James Malone
Ele Holloway
Duplicate with EFO_0001187
Dopamin
Tomasz Adamusiak
Hydroxytyramin
Oxytyramine
InChIKey=VYFYYTLLBUKUHU-UHFFFAOYAA
4-(2-Aminoethyl)benzene-1,2-diol
C8H11NO2
Revimine
dopamina
Dopamine HCl[accessedResource: NIFSTD:sao2050279787][accessDate: 10-05-2010]
Hydroxytyramine[accessedResource: NIFSTD:sao2050279787][accessDate: 10-05-2010]
Hydroxytyramine
James Malone
Dophamine[accessedResource: NIFSTD:sao2050279787][accessDate: 10-05-2010]
2-(3,4-dihydroxyphenyl)ethylamine
Revimine[accessedResource: NIFSTD:sao2050279787][accessDate: 10-05-2010]
Intropin
dopaminum
One of the catecholamine neurotransmitters in the brain. It is derived from tyrosine and is the precursor to norepinephrine and epinephrin. Dopamine is a major transmitter in the extrapyramidal system of the brain, and important in regulating movement. A family of receptors (receptors, dopamine) mediate its action (MSH).[accessedResource: NIFSTD:sao2050279787][accessDate: 10-05-2010]
Oxytyramine[accessedResource: NIFSTD:sao2050279787][accessDate: 10-05-2010]
NIFSTD:sao2050279787
3,4-Dihydroxyphenethylamine
http://www.ebi.ac.uk/efo/EFO_0001526
Dophamine
InChI=1/C8H11NO2/c9-4-3-6-1-2-7(10)8(11)5-6/h1-2,5,10-11H,3-4,9H2
Dopamin[accessedResource: NIFSTD:sao2050279787][accessDate: 10-05-2010]
One of the catecholamine neurotransmitters in the brain. It is derived from tyrosine and is the precursor to norepinephrine and epinephrin. Dopamine is a major transmitter in the extrapyramidal system of the brain, and important in regulating movement. A family of receptors (receptors, dopamine) mediate its action (MSH).
3-Hydroxytyramine
4-(2-aminoethyl)catechol
NCCc1ccc(O)c(O)c1
Deoxyepinephrine
dopamine
Deoxyepinephrine[accessedResource: NIFSTD:sao2050279787][accessDate: 10-05-2010]
A catecholamine that has formula C8H11NO2.
Intropin[accessedResource: NIFSTD:sao2050279787][accessDate: 10-05-2010]
4-(2-aminoethyl)pyrocatechol
Dopamine HCl
An assay in which the transcriptome of a biological sample is analysed using a tiling path array.
transcription profiling by tiling array
A375
James Malone
Ele Holloway
An assay with input DNA
DNA assay
James Malone
HEL9217
James Malone
Ele Holloway
WM793-P2N1
James Malone
Ele Holloway
MO_38
A measurement of the effects of different investigators, laboratories, or organizations on experimental results are studied.
operator variation
James Malone
MA:0000385
EV:0100112
tuba uterina[accessedResource: BTO:0000980][accessDate: 10-05-2010]
EMAPA:18984
MAT:0000126
oviducts[accessedResource: ZFA:0000560][accessDate: 10-05-2010]
TADS:0000415
Organ with organ cavity which connects the uterine cavity to the peritoneal cavity. Examples: There are only two uterine tubes, the right and the left uterine tubes.[accessedResource: FMAID:18245][accessDate: 10-05-2010]
Uterine tube[accessedResource: FMAID:18245][accessDate: 10-05-2010]
Organ with organ cavity which connects the uterine cavity to the peritoneal cavity. Examples: There are only two uterine tubes, the right and the left uterine tubes.
tuba uterinae[accessedResource: BTO:0000980][accessDate: 10-05-2010]
salpinx
salpinx[accessedResource: BTO:0000980][accessDate: 10-05-2010]
uterine tube
fallopian tube[accessedResource: BTO:0000980][accessDate: 10-05-2010]
oviducts
tuba uterinae
A long slender tube that extends from the upper lateral cornu of the uterus to the region of the ovary of the same side; it is attached to the broad ligament by the mesosalpinx, and consists of an ampulla, an infundibulum, an isthmus, two ostia, and a pars uterina.
tuba uterina
TAO:0000560
A long slender tube that extends from the upper lateral cornu of the uterus to the region of the ovary of the same side; it is attached to the broad ligament by the mesosalpinx, and consists of an ampulla, an infundibulum, an isthmus, two ostia, and a pars uterina.[accessedResource: BTO:0000980][accessDate: 10-05-2010]
FMAID:18245
FBbt:00004911
oviduct
ZFA:0000560
BTO:0000980
James Malone
Fallopian tube
SiHa
James Malone
Ele Holloway
anticonvulsive agent
antiepileptiques
Antikonvulsivum
Antiepileptika
antiepileptique
A drug used to prevent seizures or reduce their severity.
http://www.ebi.ac.uk/efo/EFO_0001849
Antiepileptikum
CHEBI:35623
Antikonvulsiva
anticonvulsants
anticonvulsant
James Malone
antiepileptic
67NR
James Malone
Ele Holloway
Cardiomyopathy, constrictive[accessedResource: DOID:397][accessDate: 10-05-2010]
Restrictive cardiomyopathy (disorder)[accessedResource: DOID:397][accessDate: 10-05-2010]
Cardiomyopathy, constrictive
A type of heart disorder referring to the inability of the ventricles to fill with blood because the myocardium (heart muscle) stiffens and looses its flexibility. Causes include replacement of the myocardium with scar tissue, abnormal cellular infiltration of the myocardium, or deposition of a substance (e.g., amyloid) in the myocardium.[accessedResource: NCIt:C62798][accessDate: 10-05-2010]
A type of heart disorder referring to the inability of the ventricles to fill with blood because the myocardium (heart muscle) stiffens and looses its flexibility. Causes include replacement of the myocardium with scar tissue, abnormal cellular infiltration of the myocardium, or deposition of a substance (e.g., amyloid) in the myocardium.
restrictive cardiomyopathy
primary restrictive cardiomyopathy (disorder)
primary restrictive cardiomyopathy (disorder)[accessedResource: DOID:397][accessDate: 10-05-2010]
Restrictive cardiomyopathy (disorder)
Tomasz Adamusiak
NCIt:C62798
DOID:397
EM-2
EM2
James Malone
Ele Holloway
MAT:0000002
fungal component
James Malone
unspecified peripheral T-cell lymphoma
James Malone
HT-29
James Malone
CHEBI:3764
Clc1ccccc1C(c1ccccc1)(c1ccccc1)n1ccnc1
1-(alpha-(2-Chlorophenyl)benzhydryl)imidazole
Mycelex (TN)
InChIKey=VNFPBHJOKIVQEB-UHFFFAOYAO
1-(o-Chloro-alpha,alpha-diphenylbenzyl)imidazole
C22H17ClN2
An imidazole that has formula C22H17ClN2.
1-[(2-chlorophenyl)(diphenyl)methyl]-1H-imidazole
clotrimazole
InChI=1/C22H17ClN2/c23-21-14-8-7-13-20(21)22(25-16-15-24-17-25,18-9-3-1-4-10-18)19-11-5-2-6-12-19/h1-17H
Lotrimin (TN)
http://www.ebi.ac.uk/efo/EFO_0001509
1-(o-Chlorotrityl)imidazole
James Malone
1-((2-Chlorophenyl)diphenylmethyl)-1H-imidazole
NCI Metathesaurus: C0085485
Erwinia carotovora infection
Pectobacterium carotovorum infection
James Malone
FMA:22543
plantaris
plantaris muscle
CHEBI:22986
calcium ionophores
http://www.ebi.ac.uk/efo/EFO_0002402
calcium ionophore
James Malone
Ele Holloway
Germplasm:4640315
SALK_037727 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=germplasm&id=4640315
SALK_037727
James Malone
Mus musculus subspecies
Helen Parkinson
[1-(4-chlorobenzoyl)-5-methoxy-2-methyl-1H-indol-3-yl]acetic acid
InChIKey=CGIGDMFJXJATDK-QWOVJGMICU
An indole-3-acetic acid that has formula C19H16ClNO4.
InChI=1/C19H16ClNO4/c1-11-15(10-18(22)23)16-9-14(25-2)7-8-17(16)21(11)19(24)12-3-5-13(20)6-4-12/h3-9H,10H2,1-2H3,(H,22,23)/f/h22H
Indocin
http://www.ebi.ac.uk/efo/EFO_0001557
CHEBI:49662
COc1ccc2n(C(=O)c3ccc(Cl)cc3)c(C)c(CC(O)=O)c2c1
James Malone
1-(p-chlorobenzoyl)-5-methoxy-2-methylindole-3-acetic acid
Indometacin
C19H16ClNO4
indomethacin
material property
SpecificallyDependentContinuant
James Malone
true
An experimental factor which is a property or characteristic of some other entity. For example, the mouse has the colour white.
sample characteristic
A continuant [snap:Continuant] that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same.
http://www.ebi.ac.uk/efo/EFO_0001443
James Malone
EMAPA:18333
FMAID:55097
SAEL:59
Heterogeneous cluster that connects the pharynx to the tracheobronchial tree. Examples: There is only one larynx.[accessedResource: FMAID:55097][accessDate: 10-05-2010]
The modified upper part of the trachea of air-breathing vertebrates that in humans, most other mammals, and a few lower forms contains the vocal cords.[accessedResource: BTO:0001208][accessDate: 10-05-2010]
Heterogeneous cluster that connects the pharynx to the tracheobronchial tree. Examples: There is only one larynx.
larynx
BTO:0001208
The modified upper part of the trachea of air-breathing vertebrates that in humans, most other mammals, and a few lower forms contains the vocal cords.
MA:0000414
MAT:0000187
EV:0100039
AAO:0000268
Chlorophibrinic acid
Chlorofibrinic acid
clofibric acid
Chlorfibrinic acid
Ele Holloway
2-(4-chlorophenoxy)-2-methylpropanoic acid
Clofibrinsaeure
acide clofibrique
http://www.ebi.ac.uk/efo/EFO_0002405
Clofibrate free acid
CHEBI:34648
PCIB
CC(C)(Oc1ccc(Cl)cc1)C(O)=O
InChI=1/C10H11ClO3/c1-10(2,9(12)13)14-8-5-3-7(11)4-6-8/h3-6H,1-2H3,(H,12,13)/f/h12H
alpha-(4-chlorophenoxy)-alpha-methylpropionic acid
acidum clofibricum
James Malone
2-(4-Chlorophenoxy)-2-methylpropionic acid
InChIKey=TXCGAZHTZHNUAI-XWKXFZRBCH
C10H11ClO3
Acide (p-chlorophenoxy)-2 methyl-2 propionique
2-(p-Chlorophenoxy)-2-methylpropionic acid
alpha-(p-chlorophenoxy)isobutyric acid
PCPIB
2-(p-Chlorophenoxy)isobutyric acid
CPIB
4-CPIB
acido clofibrico
TMK1
James Malone
Ele Holloway
NIFSTD:birnlex_1202
FMA:62394
Peduncle of midbrain
Peduncle of midbrain[accessedResource: FMA:62394][accessDate: 10-05-2010]
cerebral peduncle
Tomasz Adamusiak
James Malone
S=C1SSC=C1
1,2-dithiol-3-thione
A 1,2-dithiole that has formula C3H2S3.
Ele Holloway
Tomasz Adamusiak
3H-1,2-dithiole-3-thione
http://www.ebi.ac.uk/efo/EFO_0002724
CHEBI:50866
C3H2S3
1,2-dithiole-3-thione
InChIKey=LZENMJMJWQSSNJ-UHFFFAOYAS
InChI=1/C3H2S3/c4-3-1-2-5-6-3/h1-2H
DOID:4358
metastatic melanoma
Tomasz Adamusiak
Ele Holloway
BTO:0001129
Lobular organ the parenchyma of which has as its parts glandular acini which are continuous with the prostatic part of the urethra. Examples: There is only one prostate.
James Malone
EV:0100104
prostate gland
A firm partly muscular partly glandular body that is situated about the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid.[accessedResource: BTO:0001129][accessDate: 10-05-2010]
EMAPA:19287
prostate
MA:0000404
Lobular organ the parenchyma of which has as its parts glandular acini which are continuous with the prostatic part of the urethra. Examples: There is only one prostate.[accessedResource: FMAID:9600][accessDate: 10-05-2010]
FMAID:9600
prostate gland[accessedResource: BTO:0001129][accessDate: 10-05-2010]
SAEL:87
MAT:0000078
A firm partly muscular partly glandular body that is situated about the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid.
NCIt:C27576
childhood Dermatomyositis
GeneRIF:15338511
Dermatopolymyositides
Adult Type Dermatomyositides[accessedResource: MSH:D003882][accessDate: 10-05-2010]
Dermatopolymyositis[accessedResource: MSH:D003882][accessDate: 10-05-2010]
MSH:D003882
Dermatomyositides[accessedResource: MSH:D003882][accessDate: 10-05-2010]
Childhood type dermatomyositis (disorder)[accessedResource: SNOMEDCT:1212005][accessDate: 10-05-2010]
Dermatomyositides
A subacute or chronic inflammatory disease of muscle and skin, marked by proximal muscle weakness and a characteristic skin rash. The illness occurs with approximately equal frequency in children and adults. The skin lesions usually take the form of a purplish rash (or less often an exfoliative dermatitis) involving the nose, cheeks, forehead, upper trunk, and arms. The disease is associated with a complement mediated intramuscular microangiopathy, leading to loss of capillaries, muscle ischemia, muscle-fiber necrosis, and perifascicular atrophy. The childhood form of this disease tends to evolve into a systemic vasculitis. Dermatomyositis may occur in association with malignant neoplasms. (From Adams et al., Principles of Neurology, 6th ed, pp1405-6)
DOID:14203
Adult Type Dermatomyositides
childhood Dermatomyositis[accessedResource: DOID:14203][accessDate: 10-05-2010]
Dermatomyositis[accessedResource: MSH:D003882][accessDate: 10-05-2010]
Dermatomyositis
Dermatomyositides, Childhood Type
Childhood Type Dermatomyositides[accessedResource: MSH:D003882][accessDate: 10-05-2010]
James Malone
Dermatomyositis, Childhood Type
Polymyositis-Dermatomyositides[accessedResource: MSH:D003882][accessDate: 10-05-2010]
Polymyositis Dermatomyositis
juvenile dermatomyositis
Dermatopolymyositis
SNOMEDCT:1212005
Childhood type dermatomyositis (disorder)
A subacute or chronic inflammatory disease of muscle and skin, marked by proximal muscle weakness and a characteristic skin rash. The illness occurs with approximately equal frequency in children and adults. The skin lesions usually take the form of a purplish rash (or less often an exfoliative dermatitis) involving the nose, cheeks, forehead, upper trunk, and arms. The disease is associated with a complement mediated intramuscular microangiopathy, leading to loss of capillaries, muscle ischemia, muscle-fiber necrosis, and perifascicular atrophy. The childhood form of this disease tends to evolve into a systemic vasculitis. Dermatomyositis may occur in association with malignant neoplasms. (From Adams et al., Principles of Neurology, 6th ed, pp1405-6)[accessedResource: MSH:D003882][accessDate: 10-05-2010]
Dermatopolymyositides[accessedResource: MSH:D003882][accessDate: 10-05-2010]
Polymyositis Dermatomyositis[accessedResource: MSH:D003882][accessDate: 10-05-2010]
Dermatomyositis, Adult Type[accessedResource: MSH:D003882][accessDate: 10-05-2010]
Adult Type Dermatomyositis
Polymyositis-Dermatomyositides
Childhood type dermatomyositis[accessedResource: SNOMEDCT:1212005][accessDate: 10-05-2010]
steroid
Aicardi's syndrome (disorder)
NCIt:C35256
DOID:8461
Aicardi's syndrome
AIC - Aicardi syndrome
James Malone
SNOMEDCT:80651009
Aicardi's syndrome (disorder)[accessedResource: DOID:8461][accessDate: 10-05-2010]
AIC - Aicardi syndrome[accessedResource: SNOMEDCT:80651009][accessDate: 10-05-2010]
Aicardi syndrome
Aicardi's syndrome[accessedResource: DOID:8461][accessDate: 10-05-2010]
skeleton component
skeletal system[accessedResource: MAT:0000032][accessDate: 10-05-2010]
Set of bones in the entire body.
Set of all bones[accessedResource: FMAID:23875][accessDate: 10-05-2010]
Set of all bones
James Malone
MA:0000018
Skeleton
skeleton component[accessedResource: MAT:0000032][accessDate: 10-05-2010]
FMAID:23875
Set of bones in the entire body.[accessedResource: FMAID:23875][accessDate: 10-05-2010]
EMAPA:17213
EHDAA:5047
MAT:0000032
Set of bones of body
skeletal system
ZFA:0000434
skeleton structure
TAO:0000434
Set of bones of body[accessedResource: FMAID:23875][accessDate: 10-05-2010]
Skeleton[accessedResource: FMAID:23875][accessDate: 10-05-2010]
CL:0000034
A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.
A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.[accessedResource: CL:0000034][accessDate: 10-05-2010]
stem cell
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158801&type=germplasm
CS57777 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158801&type=germplasm
CS57777
James Malone
rhabdomyosarcoma
MO_544
family history design
Tomasz Adamusiak
4475
James Malone
Ele Holloway
SKMEL1
James Malone
Ele Holloway
ZFS:0000031
pharyngula prim-25
James Malone
head disease
The name of the pathology diagnosed in the organism from which the biomaterial was derived. The disease state is normal if no disease has been diagnosed. E.g Acute Lymphocytic Leukemia
James Malone
disorder of head (disorder)[accessedResource: DOID:4149][accessDate: 10-05-2010]
disorder of head (disorder)
DOID:4149
James Malone
HCC1428
http://www.arabidopsis.org/servlets/TairObject?id=4473197&type=germplasm
CS8581 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=4473197&type=germplasm
CS8581
James Malone
NCIH650
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0001871
Inhalationsnarkotikum
CHEBI:38870
Inhalationsanaesthetikum
Inhalationsnarkotika
Inhalationsanaesthetika
James Malone
inhalation anaesthetic
anesthetic gases
inhalation anesthetics
MAT:0000476
An anatomical modifier is a quality which inheres in an organism part.
anatomical modifier
James Malone
WBls:0000035
The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch.
L3 larva
MO_778
consortium member
Tomasz Adamusiak
neuroblastoma cell line differentiated w/ retinoic acid
SK-N-SH_RA
MIA PaCa-2
James Malone
MIA Paca-2
Ele Holloway
NCIH69
James Malone
Ele Holloway
blood component
Venous tree organ part
Vessels that carry blood to the heart.[accessedResource: ZFA:0000082][accessDate: 10-05-2010]
venous system
EV:0100031
Venous vessel[accessedResource: FMAID:50723][accessDate: 10-05-2010]
Venous subtree
Vessels that carry blood to the heart.
BTO:0000234
venous system[accessedResource: ZFA:0000082][accessDate: 10-05-2010]
FMAID:50723
MA:0000066
vein
EHDAA:486
Any of the tubular branching vessels that carry blood from the capillaries toward the heart.[accessedResource: BTO:0000234][accessDate: 10-05-2010]
Venous vessel
EMAPA:16240
Subdivision of venous tree (organ) which consists of branching sets of tubes (venous trunks) that form a tree; together with other venous trees (organ part), it constitutes a venous tree (organ). Examples: subclavian venous tree, jugular tree, extrahepatic portal tree, common iliac venous tree.
Any of the tubular branching vessels that carry blood from the capillaries toward the heart.
TAO:0000082
James Malone
Venous tree organ part[accessedResource: FMAID:50723][accessDate: 10-05-2010]
XAO:0000115
Subdivision of venous tree (organ) which consists of branching sets of tubes (venous trunks) that form a tree; together with other venous trees (organ part), it constitutes a venous tree (organ). Examples: subclavian venous tree, jugular tree, extrahepatic portal tree, common iliac venous tree.[accessedResource: FMAID:50723][accessDate: 10-05-2010]
ZFA:0000082
Venous subtree[accessedResource: FMAID:50723][accessDate: 10-05-2010]
MAT:0000037
CL:0000352
epiblast stem cell
embryonic stem cell
embryonic stem cell[accessedResource: CL:0000352][accessDate: 10-05-2010]
epiblast cell
James Malone
1.4
James Malone
cardiac atrium
Heart Atria
atrial tissue
The paired upper chambers of the heart. The left atrium receives oxygenated blood from the pulmonary vein and pumps blood into the left ventricle. The right atrium receives venous deoxygenated blood from the entire body via the superior and inferior vena cavae and pumps blood into the right ventricle.[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
Atria, Cardiac
NCIt:C12728
obsolete_cardiac atrium
Atria of Heart
Atria of Heart[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
Atrium of Heart[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
atrium
Auricle of Heart
Heart Atria[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
The paired upper chambers of the heart. The left atrium receives oxygenated blood from the pulmonary vein and pumps blood into the left ventricle. The right atrium receives venous deoxygenated blood from the entire body via the superior and inferior vena cavae and pumps blood into the right ventricle.
Atrium of Heart
atrial tissue[accessedResource: BTO:0000903][accessDate: 10-05-2010]
atrial chamber
Cardiac Atrium[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
In the heart, the atrium is an upper chamber found on both sides of the heart. The left atrium receives red, oxygenated blood from the lungs by way of the pulmonary veins. The right atrium receives dark red blood from the other parts of the body.[accessedResource: BTO:0000903][accessDate: 10-05-2010]
Heart Atrium
In the heart, the atrium is an upper chamber found on both sides of the heart. The left atrium receives red, oxygenated blood from the lungs by way of the pulmonary veins. The right atrium receives dark red blood from the other parts of the body.
true
Heart Atrium[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
Auricle of Heart[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
BTO:0000903
Use atrium instead : EFO_0000277
Atria, Cardiac[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
Atrium[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
SKMES1
James Malone
Ele Holloway
FMA:61906
Intermediate temporal gyrus
Intermediate temporal gyrus[accessedResource: FMA:61906][accessDate: 10-05-2010]
middle temporal gyrus
James Malone
Ele Holloway
GM07022
James Malone
XAO:0000012
The anterior and dorsal forebrain neuromere, includes the olfactory bulb. Kimmel et al, 1995.[accessedResource: TAO:0000079][accessDate: 10-05-2010]
telencephalon
An enlarged anterior or upper part of the brain; especially: the expanded anterior portion of the brain that in higher mammals overlies the rest of the brain, consists of cerebral hemispheres and connecting structures, and is considered to be the seat of conscious mental processes.
EHDAA:3496
Tomasz Adamusiak
MAT:0000421
ZFA:0000079
TAO:0000079
EMAPA:16910
The anterior and dorsal forebrain neuromere. In ray-finned fishes and most pronounced in teleosts the roof plate of the embryonic telencephalon extends laterally with the effect that the paired alar plates forming the hemispheric walls roll out lateroventrally in a process called eversion. This is unlike the development in other vertebrate groups. From Neuroanatomy of the Zebrafish Brain.
The anterior and dorsal forebrain neuromere. In ray-finned fishes and most pronounced in teleosts the roof plate of the embryonic telencephalon extends laterally with the effect that the paired alar plates forming the hemispheric walls roll out lateroventrally in a process called eversion. This is unlike the development in other vertebrate groups. From Neuroanatomy of the Zebrafish Brain.[accessedResource: ZFA:0000079][accessDate: 10-05-2010]
The anterior and dorsal forebrain neuromere, includes the olfactory bulb. Kimmel et al, 1995.
FMAID:6200
NIFSTD:birnlex_1115
cerebrum
An enlarged anterior or upper part of the brain; especially: the expanded anterior portion of the brain that in higher mammals overlies the rest of the brain, consists of cerebral hemispheres and connecting structures, and is considered to be the seat of conscious mental processes.[accessedResource: BTO:0000239][accessDate: 10-05-2010]
BTO:0000239
MFO:0002300
James Malone
MA:0000183
cerebrum[accessedResource: BTO:0000239][accessDate: 10-05-2010]
http://www.arabidopsis.org/servlets/TairObject?id=1005158646&type=germplasm
CS57622 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158646&type=germplasm
CS57622
James Malone
GRO:0005429
GRO:0005429[accessedResource: BTO:0000039][accessDate: 10-05-2010]
James Malone
A thimble-shaped group of cells found at the tip of roots; it functions to protect the meristem.[accessedResource: BTO:0000039][accessDate: 10-05-2010]
BTO:0000039
PO:0020123
MAT:0000357
root cap
A thimble-shaped group of cells found at the tip of roots; it functions to protect the meristem.
true
MO_78
An irregularity in the number or structure of chromosomes, usually in the form of a gain (duplication), loss (deletion), exchange (translocation), or alteration in sequence (inversion) of genetic material.
chromosomal aberration
Tomasz Adamusiak
Jie Zheng
ArrayExpress production team
An assay in which changes in DNA sequence copy number are analysed using a microarray. For example the analysis of LOH in tumor cells vs a non diseased sample or the comparison of clinical isolated of disease causing bacteria.
comparative genomic hybridization by array
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158759&type=germplasm
CS57735 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158759&type=germplasm
CS57735
James Malone
STA ET1
STA-ET-1
James Malone
Ele Holloway
RDES
James Malone
Ele Holloway
CSBwt-rescued fibroblasts
James Malone
The probability that an event will occur generally with unfavorable outcome.
risk status
James Malone
SKMEL3
James Malone
Ele Holloway
CL:0000100
motoneuron[accessedResource: CL:0000100][accessDate: 10-05-2010]
An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.[accessedResource: CL:0000100][accessDate: 10-05-2010]
motor neuron
James Malone
1.8
obsolete_motoneuron
An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.
motoneuron
BTO:0000312
duplicate deprecated in favour of motor neurone
A neuron with a motor function; an efferent neuron conveying motor impulses.[accessedResource: BTO:0000312][accessDate: 10-05-2010]
lateral motoneuron
medial motoneuron
A neuron with a motor function; an efferent neuron conveying motor impulses.
true
motor neuron[accessedResource: CL:0000100][accessDate: 10-05-2010]
CHEBI:31593
http://www.ebi.ac.uk/efo/EFO_0002407
fasudil hydrochloride
James Malone
Ele Holloway
TH-1
SW1116
James Malone
Ele Holloway
HYPERTR OBSTR CARDIOMYOP[accessedResource: ICD9:425.1][accessDate: 10-05-2010]
hypertrophic myocardiopathy[accessedResource: DOID:11984][accessDate: 10-05-2010]
GeneRIF:12135130
hypertrophic cardiomyopathy
GeneRIF:11853553
Obstructive cardiomyopathy
Asymmetric Septal Hypertrophy
primary hypertrophic cardiomyopathy (disorder) [Ambiguous]
Hyper. obst. cardiomyopathy
IDIOPATHIC HYPERTROPHIC SUBVALV STENOSIS
GeneRIF:12642359
GeneRIF:15698845
GeneRIF:12810613
HOCM - Hypertrophic obstructive cardiomyopathy
HCM - Hypertrophic cardiomyopathy
Cardiomyopathies, Hypertrophic
hypertrophic obstructive cardiomyopathy (disorder)[accessedResource: DOID:11984][accessDate: 10-05-2010]
Idiopathic Hypertrophic Subvalvular Stenosis[accessedResource: MSH:D002312][accessDate: 10-05-2010]
IHSS
SNOMEDCT:233873004
Cardiomyopathies, Hypertrophic[accessedResource: MSH:D002312][accessDate: 10-05-2010]
primary hypertrophic cardiomyopathy (disorder) [Ambiguous][accessedResource: DOID:11984][accessDate: 10-05-2010]
ICD9:425.1
SUBVALV STENOSIS
hyper. obst. cardiomyopathy[accessedResource: DOID:11984][accessDate: 10-05-2010]
GeneRIF:12386147
GeneRIF:15056834
DOID:11984
GeneRIF:15317754
IHSSs[accessedResource: MSH:D002312][accessDate: 10-05-2010]
hypertrophic obstructive cardiomyopathy (disorder)
Idiopathic Hypertrophic Subaortic Stenosis[accessedResource: MSH:D002312][accessDate: 10-05-2010]
Hypertrophy, Asymmetric Septal[accessedResource: MSH:D002312][accessDate: 10-05-2010]
SUBVALV STENOSIS IDIOPATHIC HYPERTROPHIC[accessedResource: MSH:D002312][accessDate: 10-05-2010]
Hypertrophic cardiomyopathy (disorder)
HOCM - Hypertrophic obstructive cardiomyopathy[accessedResource: SNOMEDCT:45227007][accessDate: 10-05-2010]
GeneRIF:11955864
GeneRIF:12376254
Asymmetric Septal Hypertrophies[accessedResource: MSH:D002312][accessDate: 10-05-2010]
IHSS[accessedResource: MSH:D002312][accessDate: 10-05-2010]
A form of CARDIAC MUSCLE disease, characterized by left and/or right ventricular hypertrophy (HYPERTROPHY, LEFT VENTRICULAR; HYPERTROPHY, RIGHT VENTRICULAR), frequent asymmetrical involvement of the HEART SEPTUM, and normal or reduced left ventricular volume. Risk factors include HYPERTENSION; AORTIC STENOSIS; and gene MUTATION; (FAMILIAL HYPERTROPHIC CARDIOMYOPATHY).[accessedResource: MSH:D002312][accessDate: 10-05-2010]
James Malone
SUBVALV STENOSIS[accessedResource: MSH:D002312][accessDate: 10-05-2010]
Hypertrophic Obstructive Cardiomyopathies[accessedResource: MSH:D002312][accessDate: 10-05-2010]
HCM - Hypertrophic cardiomyopathy[accessedResource: SNOMEDCT:233873004][accessDate: 10-05-2010]
GeneRIF:15737656
IHSSs
GeneRIF:12110947
GeneRIF:12538779
Asymmetric Septal Hypertrophies
Hypertrophic Obstructive Cardiomyopathy[accessedResource: MSH:D002312][accessDate: 10-05-2010]
GeneRIF:14645200
HYPERTR OBSTR CARDIOMYOP
GeneRIF:12474143
A condition in which the myocardium is hypertrophied without an obvious cause. The hypertrophy is generally asymmetric and may be associated with obstruction of the ventricular outflow tract.[accessedResource: NCIt:C34449][accessDate: 10-05-2010]
Obstructive cardiomyopathy[accessedResource: SNOMEDCT:45227007][accessDate: 10-05-2010]
A condition in which the myocardium is hypertrophied without an obvious cause. The hypertrophy is generally asymmetric and may be associated with obstruction of the ventricular outflow tract.
SNOMEDCT:45227007
Idiopathic Hypertrophic Subvalvular Stenosis
Idiopathic Hypertrophic Subaortic Stenosis
A form of CARDIAC MUSCLE disease, characterized by left and/or right ventricular hypertrophy (HYPERTROPHY, LEFT VENTRICULAR; HYPERTROPHY, RIGHT VENTRICULAR), frequent asymmetrical involvement of the HEART SEPTUM, and normal or reduced left ventricular volume. Risk factors include HYPERTENSION; AORTIC STENOSIS; and gene MUTATION; (FAMILIAL HYPERTROPHIC CARDIOMYOPATHY).
GeneRIF:12169652
MSH:D002312
GeneRIF:12628722
GeneRIF:15856146
GeneRIF:12754703
NCIt:C34449
GeneRIF:15118286
hypertrophic cardiomyopathy (disorder)[accessedResource: DOID:11984][accessDate: 10-05-2010]
Primary hypertrophic cardiomyopathy[accessedResource: SNOMEDCT:233873004][accessDate: 10-05-2010]
GeneRIF:15314809
hypertrophic myocardiopathy
GeneRIF:15673802
GeneRIF:16288990
Obstructive Cardiomyopathies, Hypertrophic
hypertrophic obstructive cardiomyopathy
GeneRIF:16004897
Primary hypertrophic cardiomyopathy
GeneRIF:15582318
GeneRIF:12705874
Merged plan specification and protocol and made synonymous hence this class is redundant.
true
obsolete_protocol
immunosuppressant
inmunosupresor
immunosuppressive agent
immunosuppressive agents
CHEBI:35705
James Malone
An agent that suppresses immune function by one of several mechanisms of action. Classical cytotoxic immunosuppressants act by inhibiting DNA synthesis. Others may act through activation of T-cells or by inhibiting the activation of helper cells. In addition, an immunosuppressive agent is a role played by a compound which is exhibited by a capability to diminish the extent and/or voracity of an immune response.
http://www.ebi.ac.uk/efo/EFO_0001853
fission yeast
S. pombe
http://www.ebi.ac.uk/efo/EFO_0002656
Schizosaccharomyces pombe
James Malone
http://www.ebi.ac.uk/efo/EFO_0001546
InChI=1/C5H10N2O3/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2,(H2,7,8)(H,9,10)/f/h9H,7H2
NC(CCC(N)=O)C(O)=O
Glutaminsaeure-5-amid
CHEBI:28300
2,5-diamino-5-oxopentanoic acid
Glutamin
glutamic acid gamma-amide
C5H10N2O3
2-Aminoglutaramic acid
Hgln
An alpha-amino acid that has formula C5H10N2O3.
2-amino-4-carbamoylbutanoic acid
glutamine
InChIKey=ZDXPYRJPNDTMRX-HDAMEQSMCZ
FMA:77614
ventral striatum
James Malone
MCF-7aro
James Malone
Ele Holloway
true
g/kg
gram per kilogram
James Malone
MAT:0000358
A short fleshy usually underground stem bearing minute scale leaves each of which bears a bud in its axil and is potentially able to produce a new plant.[accessedResource: BTO:0001400][accessDate: 10-05-2010]
BTO:0001400
PO:0004543
tuber
A short fleshy usually underground stem bearing minute scale leaves each of which bears a bud in its axil and is potentially able to produce a new plant.
James Malone
This should become a material entity with the role of environment
true
environment factor
The external elements and conditions which surround, influence, and affect the life and development of an organism or population.
environmental factor
James Malone
ILSXISS79/TejJ
Tomasz Adamusiak
MO_981
quality control testing design
Tomasz Adamusiak
WBls:0000027
The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch.
L2 larva
James Malone
Infections with bacteria of the genus PSEUDOMONAS.
GeneRIF:14734763
Bacterial infection due to Pseudomonas
James Malone
PSEUDOMONAS INFECT[accessedResource: MSH:D011552][accessDate: 10-05-2010]
SNOMEDCT:63398001
Pseudomonas infectious disease
Pseudomonas Infections
MSH:D011552
Bacterial infectious disease due to Pseudomonas (disorder)[accessedResource: DOID:2903][accessDate: 10-05-2010]
Bacterial infectious disease due to Pseudomonas (disorder)
GeneRIF:15950065
GeneRIF:15375173
GeneRIF:11906036
Pseudomonas Infections[accessedResource: MSH:D011552][accessDate: 10-05-2010]
Infections with bacteria of the genus PSEUDOMONAS.[accessedResource: MSH:D011552][accessDate: 10-05-2010]
Bacterial infection due to Pseudomonas[accessedResource: SNOMEDCT:63398001][accessDate: 10-05-2010]
PSEUDOMONAS INFECT
DOID:2903
Pseudomonas infectious disease[accessedResource: DOID:2903][accessDate: 10-05-2010]
GeneRIF:14695625
Pseudomonas infection
GeneRIF:16299282
Bacterial infection due to Pseudomonas (disorder)[accessedResource: SNOMEDCT:63398001][accessDate: 10-05-2010]
Bacterial infection due to Pseudomonas (disorder)
FBbt:00005831
dorsal imaginal precursor
James Malone
MO_695
data coder
Tomasz Adamusiak
FBbt:00001060
embryonic brain
James Malone
http://en.wikipedia.org/wiki/Ethnic_group
James Malone
An ethnic group is a population whose members have a common heritage that is real or presumed such as common culture, language, religion, behaviour or biological trait.
A group of people with a common cultural heritage that sets them apart from others in a variety of social relationships. (MSH); A social group characterized by a distinctive social and cultural tradition maintained from generation to generation, a common history and origin and a sense of identification with the group; members of the group have distinctive features in their way of life, shared experiences and often a common genetic heritage; these features may be reflected in their experience of health and disease. (NCI); Ethnicity - an arbitrary classification of the social group a person belongs to, and either identifies with or is identified with by others, as a result of a complex of cultural, biological, geographical and other factors such as linguistic, dietary and religion traditions; ancestry, background, allegiance, or association; and physical characteristics traditionally associated with race. Increasingly the concept is used synonymously with race but this use trend has a pragmatic basis rather than scientific. (NCI); The concept of ethnic origin is an attempt to classify people, not according to their current ethnicity, but according to where their ancestors came from. Ethnic origin has become a popular classification in statistics, where the concept of race has been largely discarded. (from Wikipedia) (NCI); a group of people with a common cultural heritage that sets them apart from others in a variety of social relationships. (CSP)[accessedResource: NIFSTD:birnlex_3016][accessDate: 10-05-2010]
A group of people with a common cultural heritage that sets them apart from others in a variety of social relationships. (MSH); A social group characterized by a distinctive social and cultural tradition maintained from generation to generation, a common history and origin and a sense of identification with the group; members of the group have distinctive features in their way of life, shared experiences and often a common genetic heritage; these features may be reflected in their experience of health and disease. (NCI); Ethnicity - an arbitrary classification of the social group a person belongs to, and either identifies with or is identified with by others, as a result of a complex of cultural, biological, geographical and other factors such as linguistic, dietary and religion traditions; ancestry, background, allegiance, or association; and physical characteristics traditionally associated with race. Increasingly the concept is used synonymously with race but this use trend has a pragmatic basis rather than scientific. (NCI); The concept of ethnic origin is an attempt to classify people, not according to their current ethnicity, but according to where their ancestors came from. Ethnic origin has become a popular classification in statistics, where the concept of race has been largely discarded. (from Wikipedia) (NCI); a group of people with a common cultural heritage that sets them apart from others in a variety of social relationships. (CSP)
ethnicity
Tomasz Adamusiak
NIFSTD:birnlex_3016
ethnic group
myeloid cell
A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage.
Any of the immature blood cells that develop in the bone marrow, such as those involved in hematopoiesis.[accessedResource: BTO:0001441][accessDate: 10-05-2010]
CL:0000763
Any of the immature blood cells that develop in the bone marrow, such as those involved in hematopoiesis.
James Malone
BTO:0001441
marrow cell
A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage.[accessedResource: CL:0000763][accessDate: 10-05-2010]
marrow cell[accessedResource: BTO:0001441][accessDate: 10-05-2010]
The upper leg bone positioned between the pelvis and the knee.[accessedResource: NCIt:C12717][accessDate: 10-05-2010]
James Malone
thigh bone
os femorale[accessedResource: BTO:0001284][accessDate: 10-05-2010]
femur
os femorale
os femoris[accessedResource: BTO:0001284][accessDate: 10-05-2010]
thigh bone[accessedResource: BTO:0001284][accessDate: 10-05-2010]
NCIt:C12717
Femoral
The upper leg bone positioned between the pelvis and the knee.
The bone that extends from the pelvis to the knee, being the longest and largest bone in the body; its head articulates with the acetabulum of the hip bone, and distally, the femur, along with the patella and tibia, forms the knee joint.
os femoris
Femoral[accessedResource: NCIt:C12717][accessDate: 10-05-2010]
BTO:0001284
The bone that extends from the pelvis to the knee, being the longest and largest bone in the body; its head articulates with the acetabulum of the hip bone, and distally, the femur, along with the patella and tibia, forms the knee joint.[accessedResource: BTO:0001284][accessDate: 10-05-2010]
femoral bone
femoral bone[accessedResource: BTO:0001284][accessDate: 10-05-2010]
CaOv3
James Malone
Ele Holloway
MO_822
cell cycle design
Tomasz Adamusiak
Tomasz Adamusiak
NIDDM
Type 2 Diabetes Mellitus
DOID:9352
Type 2 Diabetes
A type of diabetes mellitus that is characterized by insulin resistance or desensitization and increased blood glucose levels. This is a chronic disease that can develop gradually over the life of a patient and can be linked to both environmental factors and heredity.
Non-Insulin Dependent Diabetes Mellitus
Type II Diabetes
Adult-Onset Diabetes[accessedResource: NCIt:C26747][accessDate: 10-05-2010]
NCIt:C26747
NIDDM[accessedResource: NCIt:C26747][accessDate: 10-05-2010]
Adult-Onset Diabetes
Non-Insulin Dependent Diabetes[accessedResource: NCIt:C26747][accessDate: 10-05-2010]
Non-Insulin Dependent Diabetes Mellitus[accessedResource: NCIt:C26747][accessDate: 10-05-2010]
Type 2 Diabetes Mellitus Non-Insulin Dependent[accessedResource: NCIt:C26747][accessDate: 10-05-2010]
Type 2 Diabetes Mellitus Non-Insulin Dependent
Type II Diabetes[accessedResource: NCIt:C26747][accessDate: 10-05-2010]
A type of diabetes mellitus that is characterized by insulin resistance or desensitization and increased blood glucose levels. This is a chronic disease that can develop gradually over the life of a patient and can be linked to both environmental factors and heredity.[accessedResource: NCIt:C26747][accessDate: 10-05-2010]
Type 2 Diabetes[accessedResource: NCIt:C26747][accessDate: 10-05-2010]
Non-Insulin Dependent Diabetes
type II diabetes mellitus
Type 2 Diabetes Mellitus[accessedResource: NCIt:C26747][accessDate: 10-05-2010]
http://www.arabidopsis.org/servlets/TairObject?id=1005158914&type=germplasm
CS57890 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158914&type=germplasm
CS57890
James Malone
http://jaxmice.jax.org/strain/009284.html
ILSXISS94/TejJ
Tomasz Adamusiak
MDAMB415
James Malone
GM06990 is a cell line derived from some lymphoblastoid cells from a CEPH familiy of UTAH/MORMON ethnicity. It is supplied by Corriell under catalogue number GM06990.
GM06990
http://www.arabidopsis.org/servlets/TairObject?id=1005158776&type=germplasm
CS57752 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158776&type=germplasm
CS57752
James Malone
C10H15N
InChIKey=MYWUZJCMWCOHBA-VIFPVBQEBN
d-N-methylamphetamine
(alphaS)-N,alpha-dimethylbenzeneethanamine
methyl-beta-phenylisopropylamine
(2S)-N-methyl-1-phenylpropan-2-amine
http://www.ebi.ac.uk/efo/EFO_0001571
methamphetamine
CHEBI:6809
d-phenylisopropylmethylamine
CN[C@@H](C)Cc1ccccc1
(+)-(S)-N-alpha-dimethylphenethylamine
d-desoxyephedrine
An amphetamine that has formula C10H15N.
InChI=1/C10H15N/c1-9(11-2)8-10-6-4-3-5-7-10/h3-7,9,11H,8H2,1-2H3/t9-/m0/s1
d-deoxyephedrine
(S)-N,alpha-dimethylbenzeneethanamine
d-1-phenyl-2-methylaminopropane
An assay in which the transcriptome of a biological sample is analysed by serial analysis of gene expression (SAGE)
transcription profiling by SAGE
Anna Farne
MO_901
A die swap replicate is a replicate role which is borne by one of a pair of replicate assays in which LabeledExtracts derived from the same BioMaterial used for both assays (e.g., a hybridization or a 2-D gel run) differ only in that the dyes used for labeling have been reversed, e.g., assay 1: A-Cy3 vs. B-Cy5, and assay 2: A-Cy5 vs. B-Cy3. The purpose of using dye-swap replicate pairs is to assess or remove dye-specific biases from the combined experimental results.
die swap replicate
James Malone
GM12815
James Malone
MO_643
software variation design
Tomasz Adamusiak
Phenobarbituric Acid
Phenobarbitol
5-Phenyl-5-ethylbarbituric acid
CHEBI:8069
5-Ethyl-5-phenyl-pyrimidine-2,4,6-trione
http://www.ebi.ac.uk/efo/EFO_0001591
A barbiturate that has formula C12H12N2O3.
James Malone
Phenylethylbarbituric Acid
CCC1(C(=O)NC(=O)NC1=O)c1ccccc1
5-Ethyl-5-phenylbarbituric acid
PHENYLETHYLMALONYLUREA
InChI=1/C12H12N2O3/c1-2-12(8-6-4-3-5-7-8)9(15)13-11(17)14-10(12)16/h3-7H,2H2,1H3,(H2,13,14,15,16,17)/f/h13-14H
Luminal
Phenylethylbarbitursaeure
Phenylaethylbarbitursaeure
Barbituric acid substituted at C-5 by ethyl and phenyl groups.
Phenylethylbarbiturate
Phenobarbitone
InChIKey=DDBREPKUVSBGFI-KGCNKATMCV
C12H12N2O3
phenobarbital
5-ethyl-5-phenyl-2,4,6(1H,3H,5H)-pyrimidinetrione
SELENATE ION
O4Se
[SeO4](2-)
tetraoxidoselenate(2-)
selenate
InChIKey=QYHFIVBSNOWOCQ-VMRORRRTCU
InChI=1/H2O4Se/c1-5(2,3)4/h(H2,1,2,3,4)/p-2/fO4Se/q-2
[O-][Se]([O-])(=O)=O
A selenium oxoanion that has formula O4Se.
antiemetico
http://www.ebi.ac.uk/efo/EFO_0001857
CHEBI:50919
A drug used to prevent nausea or vomiting. An antiemetic may act by a wide range of mechanisms: it might affect the medullary control centers (the vomiting center and the chemoreceptive trigger zone) or affect the peripheral receptors.
antiemetic
James Malone
fins
ZFA:0000108
fins[accessedResource: ZFA:0000108][accessDate: 10-05-2010]
XAO:0000002
MAT:0000087
OntologyMappingImporter following MAT:0000087
fin
MFO:0079180
TAO:0000108
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158813&type=germplasm
CS57789 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158813&type=germplasm
CS57789
James Malone
GM12155
James Malone
RNAi
The act of alteration or modification of a cell e.g. RNAi
cellular modification
James Malone
dorEpiP2
dorsal epidermis specific anlage[accessedResource: FBbt:00005526][accessDate: 10-05-2010]
dorsal epidermis primordium
dorEpiP2[accessedResource: FBbt:00005526][accessDate: 10-05-2010]
FBbt:00005526
dorsal epidermis specific anlage
James Malone
SNOMEDCT:281170005
Arrhythmogenic right ventricular dysplasia
Arrhythmogenic right ventricular cardiomyopathy (disorder)
Arrhythmogenic right ventricular dysplasia[accessedResource: SNOMEDCT:281170005][accessDate: 10-05-2010]
Arrhythmogenic right ventricular cardiomyopathy (disorder)[accessedResource: SNOMEDCT:281170005][accessDate: 10-05-2010]
arrhythmogenic right ventricular cardiomyopathy
Tomasz Adamusiak
CHL1
James Malone
Ele Holloway
adipose[accessedResource: NCIt:C12472][accessDate: 10-05-2010]
BODYFAT[accessedResource: NCIt:C12472][accessDate: 10-05-2010]
NCIt:C12472
adipose
adipose tissue
BTO:0001487
Connective tissue in which fat is stored and which has the cells distended by droplets of fat.
A specialized form of connective tissue consisting primarily of adipocytes (fat cells), surrounded by a meshwork of collagen fibers.
James Malone
fat tissue[accessedResource: BTO:0001487][accessDate: 10-05-2010]
A specialized form of connective tissue consisting primarily of adipocytes (fat cells), surrounded by a meshwork of collagen fibers.[accessedResource: NCIt:C12472][accessDate: 10-05-2010]
Connective tissue in which fat is stored and which has the cells distended by droplets of fat.[accessedResource: BTO:0001487][accessDate: 10-05-2010]
fat tissue
BODYFAT
Obsolete: No longer required in EFO
true
NCIt:C22682
Bone (MMHCC)
obsolete_bone MMHCC
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158757&type=germplasm
CS57733 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158757&type=germplasm
CS57733
James Malone
BY4741
James Malone
FMAID:54807
Mucous membrane of tongue
Tomasz Adamusiak
Mucosa of tongue[accessedResource: FMAID:54807][accessDate: 10-05-2010]
Mucosa of tongue
tongue mucosa
Jie Zheng
Lingual mucosa[accessedResource: FMAID:54807][accessDate: 10-05-2010]
Lingual mucosa
Mucous membrane of tongue[accessedResource: FMAID:54807][accessDate: 10-05-2010]
BTO:0002506
NIFSTD:birnlex_1166
FMAID:66070
TAO:0001155
James Malone
Two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gallbladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation.[accessedResource: BTO:0002506][accessDate: 10-05-2010]
MA:0000222
ZFA:0001155
enteric PNS
MAT:0000102
enteric nervous system
Tomasz Adamusiak
PNS - enteric[accessedResource: MAT:0000102][accessDate: 10-05-2010]
Two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gallbladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation.
DU4475
James Malone
Ele Holloway
GM12236
James Malone
James Malone
A material entity is an entity that exists in full during the length of time of its existence, persists through this time while maintaining its identity and has no temporal parts. For example a heart, a human, a fly, a microarray.
material entity
An independent continuant [snap:IndependentContinuant] that is spatially extended whose identity is independent of that of other entities and can be maintained through time. Note: Material entity [snap:MaterialEntity] subsumes object [snap:Object], fiat object part [snap:FiatObjectPart], and object aggregate [snap:ObjectAggregate], which assume a three level theory of granularity, which is inadequate for some domains, such as biology.
true
sample factor
http://www.ebi.ac.uk/efo/EFO_0001434
A heart, a human, a fly, a microarray.
use EFO_0000527
obsolete_hemopoietic progenitor cell
true
hematopoietic stem cell[accessedResource: CL:0000037][accessDate: 10-05-2010]
hematopoietic progenitor cell[accessedResource: CL:0000037][accessDate: 10-05-2010]
hemopoietic progenitor cell
CL:0000037
hematopoietic progenitor cell
James Malone
hemopoietic progenitor cell[accessedResource: CL:0000037][accessDate: 10-05-2010]
colony forming unit hematopoietic
A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.
HSC
A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.[accessedResource: CL:0000037][accessDate: 10-05-2010]
hematopoietic stem cell
hemopoietic stem cell[accessedResource: CL:0000037][accessDate: 10-05-2010]
colony forming unit hematopoietic[accessedResource: CL:0000037][accessDate: 10-05-2010]
hemopoietic stem cell
HSC[accessedResource: CL:0000037][accessDate: 10-05-2010]
Intestinal Gastric Adenocarcinoma
An adenocarcinoma of the stomach arising on a background of intestinal metaplasia. Microscopically, it is characterized by a glandular pattern and it closely resembles a colonic adenocarcinoma. Grossly, it tends to be nodular, polypoid or ulcerated.[accessedResource: NCIt:C9157][accessDate: 10-05-2010]
Intestinal Stomach Adenocarcinoma[accessedResource: NCIt:C9157][accessDate: 10-05-2010]
intestinal adenocarcinoma of the stomach
Intestinal Gastric Adenocarcinoma[accessedResource: NCIt:C9157][accessDate: 10-05-2010]
gastric intestinal type adenocarcinoma
Intestinal Stomach Adenocarcinoma
Intestinal Adenocarcinoma of the Stomach[accessedResource: NCIt:C9157][accessDate: 10-05-2010]
NCIt:C9157
Intestinal Adenocarcinoma of Stomach
Intestinal Adenocarcinoma of Stomach[accessedResource: NCIt:C9157][accessDate: 10-05-2010]
James Malone
DOID:8026
An adenocarcinoma of the stomach arising on a background of intestinal metaplasia. Microscopically, it is characterized by a glandular pattern and it closely resembles a colonic adenocarcinoma. Grossly, it tends to be nodular, polypoid or ulcerated.
CCc1c(CC)c2C=C3C(CCCO)=C(C)C4=[N]3[Gd]356(OC(C)=O)(OC(C)=O)[N](=CC7=[N]3C(=Cc1n25)C(CCCO)=C7C)c1cc(OCCOCCOCCOC)c(OCCOCCOCCOC)cc1[N]6=C4
InChI=1/C48H66N5O10.2C2H4O2.Gd/c1-7-35-36(8-2)40-28-42-38(12-10-14-55)34(4)46(53-42)32-50-44-30-48(63-26-24-61-22-20-59-18-16-57-6)47(62-25-23-60-21-19-58-17-15-56-5)29-43(44)49-31-45-33(3)37(11-9-13-54)41(52-45)27-39(35)51-40;2*1-2(3)4;/h27-32,54-55H,7-26H2,1-6H3;2*1H3,(H,3,4);/q-1;;;+3/p-2/b39-27-,40-28-,41-27-,42-28-,45-31-,46-32-,49-31+,49-43+,50-32+,50-44+;;;/fC48H66N5O10.2C2H3O2.Gd/qm;2*-1;m
CHEBI:50161
InChIKey=VAZLWPAHMORDGR-MPNKMPCTDC
Gd-Tex
C52H72GdN5O14
bis(acetato-kappaO){3,3'-[4,5-diethyl-16,17-bis{2-[2-(2-methoxyethoxy)ethoxy]ethoxy}-10,23-dimethyl-13,20,25,26,27-pentaazapentacyclo[20.2.1.1(3,6).1(8,11).0(14,19)]heptacosa-1,3,5,7,9,11(26),12,14,16,18,20,22(25),23-tridecaene-9,24-diyl-kappa(5)N(13),N(20),N(25),N(26),N(27)]dipropan-1-olato}gadolinium
A metallotexaphyrin that has formula C52H72GdN5O14.
Xcytrin
Gd texaphyrin
MGd
(PB-7-11-233'2'4)-bis(acetato-kappaO)(9,10-diethyl-20,21-bis(2-(2-(2-methoxyethoxy)ethoxy)ethoxy)-4,15-dimethyl-8,11-imino-3,6:16,13-dinitrilo-1,18-benzodiazacycloeicosine-5,14-dipropanolato-kappaN(1),kappaN(18),kappaN(23),kappaN(24),kappaN(25))gadolinium
motexafin gadolinium
http://www.ebi.ac.uk/efo/EFO_0001575
gadolinium texaphyrin
1.8
true
obsolete_HT1080
James Malone
Ele Holloway
duplicate with EFO_0002059
2.1
true
obsolete_GM12891
James Malone
duplicate with EFO_0002785
astragalus[accessedResource: BTO:0002354][accessDate: 10-05-2010]
The highest of the tarsal bones and the one that articulates with the tibia and fibula to form the ankle joint.[accessedResource: BTO:0002354][accessDate: 10-05-2010]
os tarsi tibiale
James Malone
astragalus
NCIt:C32078
Ankle Joint
ankle bone[accessedResource: BTO:0002354][accessDate: 10-05-2010]
os tarsi tibiale[accessedResource: BTO:0002354][accessDate: 10-05-2010]
astragaloid bone[accessedResource: BTO:0002354][accessDate: 10-05-2010]
BTO:0002354
A gliding joint between the distal ends of the tibia and fibula and the proximal end of the talus.
ankle bone
ankle
astragaloid bone
Ankle Joint[accessedResource: NCIt:C32078][accessDate: 10-05-2010]
talus
talus[accessedResource: BTO:0002354][accessDate: 10-05-2010]
The highest of the tarsal bones and the one that articulates with the tibia and fibula to form the ankle joint.
A gliding joint between the distal ends of the tibia and fibula and the proximal end of the talus.[accessedResource: NCIt:C32078][accessDate: 10-05-2010]
dendritic cell-derived intermediate cell
ssMCF7
James Malone
Ele Holloway
GeneRIF:15687131
Increased VASCULAR RESISTANCE in the PULMONARY CIRCULATION, usually secondary to HEART DISEASES or LUNG DISEASES.
Syndrome, Ayerza
GeneRIF:15979050
GeneRIF:15353500
A syndrome with pathological changes in the pulmonary arteries and impaired PULMONARY CIRCULATION that can be the result of PULMONARY HYPERTENSION. Ayerza syndrome is characterized by slowly developing ASTHMA; BRONCHITIS; DYSPNEA; and CYANOSIS in association with POLYCYTHEMIA.
GeneRIF:15761249
PULM HYPERTENSION
GeneRIF:15286002
GeneRIF:16215633
pulmonary hypertension (disorder)[accessedResource: DOID:6432][accessDate: 10-05-2010]
GeneRIF:15242552
GeneRIF:15217799
GeneRIF:15505094
GeneRIF:14507115
Ayerza Arrilaga Syndrome[accessedResource: MSH:D006976][accessDate: 10-05-2010]
GeneRIF:14970910
GeneRIF:14759414
DOID:6432
SNOMEDCT:70995007
GeneRIF:12714563
pulmonary hypertension (disorder)
Ayerza Syndrome[accessedResource: MSH:D006976][accessDate: 10-05-2010]
GeneRIF:12740218
GeneRIF:14684682
PHT - Pulmonary hypertension[accessedResource: SNOMEDCT:70995007][accessDate: 10-05-2010]
A syndrome with pathological changes in the pulmonary arteries and impaired PULMONARY CIRCULATION that can be the result of PULMONARY HYPERTENSION. Ayerza syndrome is characterized by slowly developing ASTHMA; BRONCHITIS; DYSPNEA; and CYANOSIS in association with POLYCYTHEMIA.[accessedResource: MSH:D006976][accessDate: 10-05-2010]
GeneRIF:15516492
GeneRIF:15358862
GeneRIF:15725412
pulmonary hypertension
Increased VASCULAR RESISTANCE in the PULMONARY CIRCULATION, usually secondary to HEART DISEASES or LUNG DISEASES.[accessedResource: MSH:D006976][accessDate: 10-05-2010]
GeneRIF:16113050
GeneRIF:12244304
GeneRIF:15824199
Ayerza's Syndrome[accessedResource: MSH:D006976][accessDate: 10-05-2010]
GeneRIF:12391106
GeneRIF:16236896
GeneRIF:12750401
GeneRIF:12909593
GeneRIF:12358323
GeneRIF:12016106
GeneRIF:12547729
GeneRIF:15192043
GeneRIF:15031260
GeneRIF:15295086
Ayerza's Syndrome
GeneRIF:14530202
GeneRIF:12391278
Pulmonary hypertension, NOS[accessedResource: SNOMEDCT:70995007][accessDate: 10-05-2010]
Pulmonary hypertension, NOS
GeneRIF:14726295
GeneRIF:15146952
GeneRIF:15155268
GeneRIF:12896876
GeneRIF:16085672
GeneRIF:15520307
GeneRIF:12835224
PULM HYPERTENSION[accessedResource: MSH:D006976][accessDate: 10-05-2010]
GeneRIF:14512515
James Malone
GeneRIF:12177436
MSH:D006976
Ayerza-Arrilaga Syndrome
GeneRIF:15364894
GeneRIF:15618545
GeneRIF:15331358
GeneRIF:14715505
PHT - Pulmonary hypertension
GeneRIF:15684702
NCIt:C15197
case control study
Tomasz Adamusiak
James Malone
C45H69N5O8S
apratoxin A
N-((2E)-3-((4S)-4,5-dihydro-2-((1S,2S,4S,6S)-2,6-dihydroxy-1,4,7,7-tetramethyloctyl)-4-thiazolyl)-2-methyl-1-oxo-2-propenyl)-O-methyl-L-tyrosyl-N-methyl-L-alanyl-N-methyl-L-isoleucyl-L-proline (4-16)-lactone
7'''.1,4-anhydro(N-{3-[2-(3,7-dihydroxy-5,8,8-trimethylnonan-2-yl)-4,5-dihydro-1,3-thiazol-4-yl]-2-methylpropenoyl}-O-methyl-L-tyrosyl-N-methyl-L-alanyl-N-methyl-L-isoleucyl-L-proline)
(2S,3S,5S,7S,10S,16S,19S,22S,25E,27S)-16-[(2S)-butan-2-yl]-7-tert-butyl-3-hydroxy-22-(4-methoxybenzyl)-2,5,17,19,20,25-hexamethyl-8-oxa-29-thia-14,17,20,23,30-pentaazatricyclo[25.2.1.0(10,14)]triaconta-1(30),25-diene-9,15,18,21,24-pentone
An apratoxin that has formula C45H69N5O8S.
[H]N1[C@@H](Cc2ccc(OC)cc2)C(=O)N(C)[C@@H](C)C(=O)N(C)[C@@H]([C@@H](C)CC)C(=O)N2CCC[C@H]2C(=O)O[C@@H](C[C@@H](C)C[C@H](O)[C@H](C)C2=N[C@H](CS2)\\C=C(C)\\C1=O)C(C)(C)C
InChI=1/C45H69N5O8S/c1-13-27(3)38-43(55)50-20-14-15-35(50)44(56)58-37(45(7,8)9)22-26(2)21-36(51)29(5)40-46-32(25-59-40)23-28(4)39(52)47-34(24-31-16-18-33(57-12)19-17-31)42(54)48(10)30(6)41(53)49(38)11/h16-19,23,26-27,29-30,32,34-38,51H,13-15,20-22,24-25H2,1-12H3,(H,47,52)/b28-23+/t26-,27-,29-,30-,32-,34-,35-,36-,37-,38-/m0/s1/f/h47H
CHEBI:35212
http://www.ebi.ac.uk/efo/EFO_0001488
InChIKey=KXUJXPZXILTXDA-WUCPXUHADD
lungs
EMAPA:16728
SAEL:62
James Malone
Lobular organ which has as its parts alveoli connected to the tracheobronchial tree. Examples: There are only two instances, right lung and left lung.[accessedResource: FMAID:7195][accessDate: 10-05-2010]
EV:0100042
MAT:0000135
lung
XAO:0000119
Lobular organ which has as its parts alveoli connected to the tracheobronchial tree. Examples: There are only two instances, right lung and left lung.
AAO:0000275
One of the usually paired compound saccular thoracic organs that constitute the basic respiratory organ of air-breathing vertebrates.
FMAID:7195
MA:0000415
lungs[accessedResource: MAT:0000135][accessDate: 10-05-2010]
One of the usually paired compound saccular thoracic organs that constitute the basic respiratory organ of air-breathing vertebrates.[accessedResource: BTO:0000763][accessDate: 10-05-2010]
BTO:0000763
EHDAA:2205
NHEK
James Malone
shoot tip[accessedResource: BTO:0000247][accessDate: 10-05-2010]
The terminal bud (0.1 - 1.0 mm) of a plant, which consists of the apical meristem (0.05 - 0.1 mm) and the immediate surrounding leaf primordia and developing leaves and adjacent stem tissue.[accessedResource: BTO:0000247][accessDate: 10-05-2010]
shoot tip
GRO:0000370[accessedResource: BTO:0000247][accessDate: 10-05-2010]
shoot apex
PO:0000037
BTO:0000247
GRO:0000370
The terminal bud (0.1 - 1.0 mm) of a plant, which consists of the apical meristem (0.05 - 0.1 mm) and the immediate surrounding leaf primordia and developing leaves and adjacent stem tissue.
http://jaxmice.jax.org/strain/009285.html
ILSXISS97/TejJ
Tomasz Adamusiak
FAB M3[accessedResource: NCIt:C3182][accessDate: 10-05-2010]
James Malone
Acute Promyelocytic Leukemia with t(15;17)(q22;q12); PML/RARA
APL
FAB M3
APML - Acute promyelocytic leukemia
APML
AML with t(15;17)(q22;q12)
APL[accessedResource: NCIt:C3182][accessDate: 10-05-2010]
Promyelocytic Leukemia
APML[accessedResource: NCIt:C3182][accessDate: 10-05-2010]
AML with t(15;17)(q22;q12)[accessedResource: NCIt:C3182][accessDate: 10-05-2010]
NCIt:C3182
Promyelocytic Leukemia[accessedResource: NCIt:C3182][accessDate: 10-05-2010]
APML - Acute promyelocytic leukemia[accessedResource: NCIt:C3182][accessDate: 10-05-2010]
An acute myeloid leukemia (AML) in which abnormal promyelocytes predominate. It is characterized by the t(15;17)(q22;q12) translocation. There are two variants: the typical and microgranular variant. This AML is particularly sensitive to treatment with all trans-retinoic acid and has a favorable prognosis. (WHO, 2001)
An acute myeloid leukemia (AML) in which abnormal promyelocytes predominate. It is characterized by the t(15;17)(q22;q12) translocation. There are two variants: the typical and microgranular variant. This AML is particularly sensitive to treatment with all trans-retinoic acid and has a favorable prognosis. (WHO, 2001)[accessedResource: NCIt:C3182][accessDate: 10-05-2010]
acute promyelocytic leukemia
Acute Promyelocytic Leukemia with t(15;17)(q22;q12); PML/RARA[accessedResource: NCIt:C3182][accessDate: 10-05-2010]
An acute myeloid leukemia (AML) in which abnormal promyelocytes predominate. It is characterized by the t(15;17)(q22;q12) translocation. There are two variants: the typical and micro granular (hypo granular) variant. This AML is particularly sensitive to treatment with all trans-retinoic acid and has a favorable prognosis. (WHO, 2001) -- 2003
FBbt:00005835
MAT:0000061
James Malone
extraembryonic tissue
Anatomical structure that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo.[accessedResource: ZFA:0000020][accessDate: 10-05-2010]
extraembryonic structure
extraembryonic structure[accessedResource: ZFA:0000020][accessDate: 10-05-2010]
extraembryonic component
extraembryonic structures[accessedResource: ZFA:0000020][accessDate: 10-05-2010]
SAEL:39
ZFA:0000020
EMAPA:16042
Anatomical structure that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo.
extraembryonic component[accessedResource: MAT:0000061][accessDate: 10-05-2010]
extraembryonic structures
NIC Thesaurus: C9160
childhood acute myeloid leukemia
James Malone
culm
stalk[accessedResource: BTO:0001300][accessDate: 10-05-2010]
The main trunk of a plant; specifically: a primary plant axis that develops buds and shoots instead of roots.
James Malone
PO:0009047
culm[accessedResource: BTO:0001300][accessDate: 10-05-2010]
The main trunk of a plant; specifically: a primary plant axis that develops buds and shoots instead of roots.[accessedResource: BTO:0001300][accessDate: 10-05-2010]
axis[accessedResource: BTO:0001300][accessDate: 10-05-2010]
axis
stalk
stem
BTO:0001300
MAT:0000239
MO_101
An animal or plant or part thereof that nourishes and supports a parasite either in a lab or natural environment.
host
Tomasz Adamusiak
Jie Zheng
James Malone
true
UO:0000182
http://www.ebi.ac.uk/efo/EFO_0001808
A derived unit which is a standard measure of the influence exerted by some mass.
A density unit is a derived unit which is a standard measure of the influence exerted by some mass.
density unit
James Malone
NCIt:C12232
FMA:55022
Uvula of palate
Uvula of palate[accessedResource: FMA:55022][accessDate: 10-05-2010]
uvula
James Malone
A gene expression hybridization on an Affymetrix U133 chip
An assay which uses array based technology to determine information about nucleic acids or proteins
array assay
JAX:8075Â Â Â Â
TBP-105Q is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/008075.html
TBP-105Q
James Malone
http://jaxmice.jax.org/strain/009275.html
ILSXISS66/TejJ
Tomasz Adamusiak
TERV-ST110
James Malone
Hereditary Leiomyomatosis and Renal Cell Carcinoma
James Malone
HLRCC
NCIt:C51302
Hereditary Leiomyomatosis and Renal Cell Carcinoma[accessedResource: NCIt:C51302][accessDate: 10-05-2010]
hereditary leiomyomatosis and renal cell cancer
HLRCC[accessedResource: NCIt:C51302][accessDate: 10-05-2010]
baker's yeast
http://www.ebi.ac.uk/efo/EFO_0002655
Saccharomyces cerevisiae
James Malone
NIFSTD:birnlex_982
nucleus raphes posterior
A large raphe nucleus extending from the anterior part of the pons through the mesencephalon; its neurons are serotoninergic.[accessedResource: BTO:0002434][accessDate: 10-05-2010]
posterior raphe nucleus[accessedResource: BTO:0002434][accessDate: 10-05-2010]
posterior raphe nucleus
James Malone
nucleus raphes dorsalis
BTO:0002434
nucleus raphes dorsalis[accessedResource: BTO:0002434][accessDate: 10-05-2010]
A large raphe nucleus extending from the anterior part of the pons through the mesencephalon; its neurons are serotoninergic.
nucleus raphes posterior[accessedResource: BTO:0002434][accessDate: 10-05-2010]
Tomasz Adamusiak
dorsal raphe nucleus
Not needed.
true
The type of nucleic acid obtained as a result of following a given protocol.
obsolete_nucleic acid extracted
InChIKey=DBUXSCUEGJMZAE-UHFFFAOYAW
monomethylmercury cation
A methylmercury compound that has formula CH3Hg.
C[Hg+]
[HgCH3](+)
CH3Hg
METHYL MERCURY ION
methylmercury(II) cation
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0002730
methylmercury(II)
methylmercury ion(1+)
CHEBI:49747
InChI=1/CH3.Hg/h1H3;/q;+1
[HgMe](+)
methylmercury(1+)
Ele Holloway
methylmercury
MO_696
http://www.ebi.ac.uk/efo/EFO_0002026
An instrument which removes liquid by the application of negative pressure, i.e. vacuum.
vacuum dryer
James Malone
µs
microsecond
http://www.ebi.ac.uk/efo/EFO_0001792
A microsecond is a time unit which is equal to one millionth of a second or 10^-6 s.
MO_795
Jie Zheng
us
James Malone
Tomasz Adamusiak
A time unit which is equal to one millionth of a second or 10^[-6] s.
true
An epithelial cell derived cell line is defined as something that derives from an epithelial cell.
epithelial cell derived cell line
Natural Language Generator 8th April 2010
James Malone
DB
James Malone
Ele Holloway
B-Lymphocyte
CL:0000236
B Cells
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.
B lymphocyte[accessedResource: CL:0000236][accessDate: 10-05-2010]
Bursa-Equivalent Lymphocyte
Bursa-Dependent Lymphocytes[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B cell
B-Lymphocytes[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
James Malone
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B Lymphocytes
NCIt:C12474
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.
B Cells[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
Bursa-Equivalent Lymphocyte[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.[accessedResource: CL:0000236][accessDate: 10-05-2010]
Bursa-Dependent Lymphocytes
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)
Oligodendroblastoma
Mixed Oligodendroglioma-Astrocytomas
A WHO grade II tumor composed of a conspicuous mixture of two distinct neoplastic cell types morphologically resembling the tumor cells in oligodendroglioma and diffuse astrocytoma. (WHO)
MSH:D009837
Oligodendroglioma, Well-Differentiated[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Mixed Oligodendroglioma-Ependymomas
Oligodendroglioma
Oligodendroblastomas
Oligodendroglioma, Childhood[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Mixed Oligodendroglioma-Astrocytoma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
DOID:7912
Oligodendroglioma, Childhood
Anaplastic Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Mixed Oligo-Astrocytoma
Mixed Oligo-Astrocytoma[accessedResource: NCIt:C4050][accessDate: 10-05-2010]
Oligodendrogliomas, Childhood[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Childhood Oligodendrogliomas
WELL DIFFER OLIGODENDROGLIOMA[accessedResource: MSH:D009837][accessDate: 10-05-2010]
WHO grade II Mixed Glioma
Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroblastomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Mixed Oligodendroglioma Ependymoma
true
Mixed Astrocytic-Oligodendroglial Tumor
Duplicate with oligoastrocytoma (EFO_0000630) use this instead
obsolete_oligoastroglioma
Oligodendrogliomas, Well-Differentiated[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Adult Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
James Malone
mixed Oligodendroglioma-astrocytoma
A WHO grade II tumor composed of a conspicuous mixture of two distinct neoplastic cell types morphologically resembling the tumor cells in oligodendroglioma and diffuse astrocytoma. (WHO)[accessedResource: NCIt:C4050][accessDate: 10-05-2010]
Mixed Astrocytic-Oligodendroglial Tumor[accessedResource: NCIt:C4050][accessDate: 10-05-2010]
Mixed Astrocytic-Oligodendroglial Neoplasm
Oligodendroglioma, Anaplastic[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
WHO grade II mixed glioma[accessedResource: DOID:7912][accessDate: 10-05-2010]
Well-Differentiated Oligodendrogliomas
Mixed Oligodendroglioma Ependymoma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Anaplastic Oligodendroglioma
Oligoastrocytoma
WELL DIFFER OLIGODENDROGLIOMA
Adult Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroglioma, Adult
Adult Oligodendrogliomas
Mixed Oligodendroglioma-Astrocytomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
NCIt:C4050
Oligoastrocytoma[accessedResource: DOID:7912][accessDate: 10-05-2010]
1.5
Oligodendroglioma, Well Differentiated
Mixed Oligodendroglioma-Ependymomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendrogliomas, Anaplastic
Mixed Astrocytic-Oligodendroglial Neoplasm[accessedResource: NCIt:C4050][accessDate: 10-05-2010]
Oligodendrogliomas
Oligodendroblastoma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Solexa sequencing of coding RNA
Helen Parkinson
An assay which uses high throughput sequencing technology to determine the sequence of nucleic acids
high throughput sequencing assay
http://www.ebi.ac.uk/efo/EFO_0001895
CHEBI:50739
A substance that possess antiestrogenic actions but can also produce estrogenic effects as well. It acts as complete or partial agonist or as antagonist. It can be either steroidal or nonsteroidal in structure.
estrogen receptor modulator
James Malone
http://jaxmice.jax.org/strain/009271.html
ILSXISS49/TejJ
Tomasz Adamusiak
A human role is a role that can be borne by a human.
human role
James Malone
The snail shell-shaped auditory component of the inner ear. It contains the sensory organ of hearing.
FMAID:60201
Cochlear
SAEL:21
Cochlear part of bony labyrinth[accessedResource: FMAID:60201][accessDate: 10-05-2010]
EV:0100363
NCIt:C12395
Cochlear Organ[accessedResource: NCIt:C12395][accessDate: 10-05-2010]
Tomasz Adamusiak
BTO:0000267
Cochlea[accessedResource: FMAID:60201][accessDate: 10-05-2010]
The snail shell-shaped auditory component of the inner ear. It contains the sensory organ of hearing.[accessedResource: NCIt:C12395][accessDate: 10-05-2010]
Cochlear[accessedResource: NCIt:C12395][accessDate: 10-05-2010]
Cochlear Organ
cochlea
Cochlear part of bony labyrinth
XAO:0000197
A division of the bony labyrinth of the inner ear of higher vertebrates that is usually coiled like a snail shell and is the seat of the hearing organ.
EHDAA:4716
James Malone
EMAPA:17597
MA:0000240
A division of the bony labyrinth of the inner ear of higher vertebrates that is usually coiled like a snail shell and is the seat of the hearing organ.[accessedResource: BTO:0000267][accessDate: 10-05-2010]
NIFSTD:birnlex_1190
cochlea structure
MAT:0000144
haemopoietic system cell line
small adipocyte
Tomasz Adamusiak
Jie Zheng
A malignant, invasive embryonal neoplasm arising from the cerebellum. It occurs predominantly in children and has the tendency to metastasize via the cerebrospinal fluid pathways. Signs and symptoms include truncal ataxia, disturbed gait, lethargy, headache, and vomiting. There are four histologic variants: classic medulloblastoma, desmoplastic medulloblastoma, large cell medulloblastoma, and medulloblastoma with extensive nodularity and advanced neuronal differentiation. (from NCI Thesuarus)
medulloblastoma
FBbt:00005414
ectoderm anlage in statu nascendi
James Malone
MAT:0000337
FBbt:00005802
A medial cleft or depression dividing the left and right protocerebrum and containing numerous large and small somata of neurosecretory and neuromodulatory neurons.
A medial cleft or depression dividing the left and right protocerebrum and containing numerous large and small somata of neurosecretory and neuromodulatory neurons.[accessedResource: FBbt:00005802][accessDate: 10-05-2010]
pars intercerebralis
James Malone
James Malone
Dorsal thalamus
Multi-tissue structure that is paired, and is situated one on either side of and forming part of the lateral wall of the third ventricle.
future thalamus
SAEL:105
Tomasz Adamusiak
The largest subdivision of the diencephalon that consists chiefly of an ovoid mass of nuclei in each lateral wall of the third ventricle and functions in the integration of sensory information.
ZFA:0001215
MA:0000179
thalamus
EV:0100195
thalami[accessedResource: ZFA:0001215][accessDate: 10-05-2010]
BTO:0001365
NIFSTD:birnlex_954
FMAID:62007
Multi-tissue structure that is paired, and is situated one on either side of and forming part of the lateral wall of the third ventricle.[accessedResource: ZFA:0001215][accessDate: 10-05-2010]
EMAPA:17540
Dorsal thalamus (Anthoney)
future thalamus[accessedResource: MAT:0000109][accessDate: 10-05-2010]
TAO:0001215
Dorsal thalamus[accessedResource: FMAID:62007][accessDate: 10-05-2010]
Dorsal thalamus (Anthoney)[accessedResource: FMAID:62007][accessDate: 10-05-2010]
MAT:0000109
thalami
The largest subdivision of the diencephalon that consists chiefly of an ovoid mass of nuclei in each lateral wall of the third ventricle and functions in the integration of sensory information.[accessedResource: BTO:0001365][accessDate: 10-05-2010]
EHDAA:3482
J82
James Malone
Ele Holloway
Cylindromas
MSH:D003528
Carcinomas, Adenoid Cystic
GeneRIF:11780226
adenoid cystic carcinoma
Cylindroma
Carcinoma characterized by bands or cylinders of hyalinized or mucinous stroma separating or surrounded by nests or cords of small epithelial cells. When the cylinders occur within masses of epithelial cells, they give the tissue a perforated, sievelike, or cribriform appearance. Such tumors occur in the mammary glands, the mucous glands of the upper and lower respiratory tract, and the salivary glands. They are malignant but slow-growing, and tend to spread locally via the nerves. (Dorland, 27th ed)[accessedResource: MSH:D003528][accessDate: 10-05-2010]
Cylindroma[accessedResource: MSH:D003528][accessDate: 10-05-2010]
Cylindroma (except Cylindroma of skin, M-82000)[accessedResource: SNOMEDCT:11671000][accessDate: 10-05-2010]
A malignant tumor arising from the epithelial cells. Microscopically, the neoplastic epithelial cells form cylindrical spatial configurations (cribriform or classic type of adenoid cystic carcinoma), cordlike structures (tubular type of adenoid cystic carcinoma), or solid structures (basaloid variant of adenoid cystic carcinoma). Adenoid cystic carcinomas mostly occur in the salivary glands. Other primary sites of involvement include the lacrimal gland, the larynx, and the lungs. Adenoid cystic carcinomas spread along nerve sheaths, resulting in severe pain, and they tend to recur. Lymph node metastases are unusual; hematogenous tumor spread is characteristic.
GeneRIF:12624503
Cylindroid Adenocarcinoma
Cylindroma NOS
Cylindroma (except Cylindroma of skin, M-82000)
adenoid cystic carcinoma (morphologic abnormality)[accessedResource: DOID:4866][accessDate: 10-05-2010]
GeneRIF:12452045
Cylindroma, NOS (except Cylindroma of skin, M-82000)
Adenoid cystic carcinoma (morphologic abnormality)
adenoid cystic cancer
GeneRIF:15943036
Adenocystic Carcinoma[accessedResource: NCIt:C2970][accessDate: 10-05-2010]
Cylindroma NOS[accessedResource: DOID:4866][accessDate: 10-05-2010]
GeneRIF:15529180
Bronchial adenoma, cylindroid[accessedResource: SNOMEDCT:11671000][accessDate: 10-05-2010]
Carcinoma characterized by bands or cylinders of hyalinized or mucinous stroma separating or surrounded by nests or cords of small epithelial cells. When the cylinders occur within masses of epithelial cells, they give the tissue a perforated, sievelike, or cribriform appearance. Such tumors occur in the mammary glands, the mucous glands of the upper and lower respiratory tract, and the salivary glands. They are malignant but slow-growing, and tend to spread locally via the nerves. (Dorland, 27th ed)
Cylindromas[accessedResource: MSH:D003528][accessDate: 10-05-2010]
Bronchial adenoma, cylindroid
Carcinomas, Adenoid Cystic[accessedResource: MSH:D003528][accessDate: 10-05-2010]
adenoid cystic cancer[accessedResource: DOID:4866][accessDate: 10-05-2010]
SNOMEDCT:11671000
A malignant tumor arising from the epithelial cells. Microscopically, the neoplastic epithelial cells form cylindrical spatial configurations (cribriform or classic type of adenoid cystic carcinoma), cordlike structures (tubular type of adenoid cystic carcinoma), or solid structures (basaloid variant of adenoid cystic carcinoma). Adenoid cystic carcinomas mostly occur in the salivary glands. Other primary sites of involvement include the lacrimal gland, the larynx, and the lungs. Adenoid cystic carcinomas spread along nerve sheaths, resulting in severe pain, and they tend to recur. Lymph node metastases are unusual; hematogenous tumor spread is characteristic.[accessedResource: NCIt:C2970][accessDate: 10-05-2010]
Cylindroma (morphologic abnormality)[accessedResource: DOID:4866][accessDate: 10-05-2010]
Cylindroma, NOS (except Cylindroma of skin, M-82000)[accessedResource: SNOMEDCT:11671000][accessDate: 10-05-2010]
GeneRIF:15370139
Adenocarcinoma, cylindroid[accessedResource: SNOMEDCT:11671000][accessDate: 10-05-2010]
GeneRIF:15292943
James Malone
Cylindroma (morphologic abnormality)
Adenocystic carcinoma
NCIt:C2970
DOID:4866
FMAID:13890
XAO:0000167
Any of usually four small endocrine glands that are adjacent to or embedded in the thyroid gland and produce parathyroid hormone.
parathyroid hormone secreting cell
chief cell
chief cell[accessedResource: TAO:0009207][accessDate: 10-05-2010]
parathyroid
MA:0000128
EV:0100134
James Malone
Any of usually four small endocrine glands that are adjacent to or embedded in the thyroid gland and produce parathyroid hormone.[accessedResource: BTO:0000997][accessDate: 10-05-2010]
TAO:0009207
EHDAA:3864
parathyroid hormone secreting cell[accessedResource: TAO:0009207][accessDate: 10-05-2010]
BTO:0000997
EHDAA:3870
James Malone
EHDAA:9144
MA:0000347
SAEL:109
MAT:0000040
EMAPA:18870
EV:0100058
A fleshy movable process of the floor of the mouths of most vertebrates that bears sensory end organs and small glands and functions especially in taking and swallowing food and in humans as a speech organ.
XAO:0000446
A fleshy movable process of the floor of the mouths of most vertebrates that bears sensory end organs and small glands and functions especially in taking and swallowing food and in humans as a speech organ.[accessedResource: BTO:0001385][accessDate: 10-05-2010]
FMAID:54640
BTO:0001385
tongue
http://www.ebi.ac.uk/efo/EFO_0001445
A data set is an information entity that is an aggregate of other information entities that have something in common and are considered to form a unit.
data set
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005164920&type=germplasm
CS57924 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005164920&type=germplasm
CS57924
James Malone
James Malone
HCC1007
Natural Language Generator 8th April 2010
A HCC1007 is a cell line.
A HCC1007 is all of the following: something that is bearer of a breast carcinoma, something that derives from an epithelial cell, and something that derives from a mammary gland.
NCIt:C32836
FMA:3947
internal carotid artery
James Malone
James Malone
An agent that selectively binds to and activates beta-adrenergic receptors.
beta-adrenergic receptor agonist
http://www.ebi.ac.uk/efo/EFO_0001843
beta-adrenergic agonists
ß-adrenergic agonist
beta-adrenergic agonist
CHEBI:35522
beta-adrenoceptor agonists
The quality of an organism that has successful reproduced.
parous
James Malone
Fetal Blood
Fetal Blood[accessedResource: NCIt:C22560][accessDate: 10-05-2010]
Jie Zheng
fetal blood cell
Tomasz Adamusiak
Blood (fetal) (MMHCC)[accessedResource: NCIt:C22560][accessDate: 10-05-2010]
Blood (fetal) (MMHCC)
NCIt:C22560
antioxidants
http://www.ebi.ac.uk/efo/EFO_0001817
CHEBI:22586
antoxidant
antioxydant
A substance that opposes oxidation or inhibits reactions brought about by dioxygen or peroxides.
James Malone
antioxidant
FBbt:00001791
dorsal histoblast nest abdominal
James Malone
Other cataract NOS (disorder)[accessedResource: SNOMEDCT:193622008][accessDate: 10-05-2010]
CATARACT W RADIATION
GeneRIF:11864421
Cataract form (observable entity)[accessedResource: SNOMEDCT:247053007][accessDate: 10-05-2010]
GeneRIF:12485166
Cataract associated with other syndromes
GeneRIF:15277496
GeneRIF:15570218
ICD9:366.44
Cataract associated with other syndromes (disorder)[accessedResource: SNOMEDCT:193608008][accessDate: 10-05-2010]
Other cataract NOS[accessedResource: SNOMEDCT:193622008][accessDate: 10-05-2010]
Cataract NOS[accessedResource: SNOMEDCT:193623003][accessDate: 10-05-2010]
GeneRIF:12944971
GeneRIF:12089525
GeneRIF:15016766
NCIt:C26713
SNOMEDCT:193622008
CATARACT W SYNDROME NEC
ICD9:366
SNOMEDCT:193623003
SNOMEDCT:193570009
GeneRIF:15041957
GeneRIF:11955914
GeneRIF:12620964
SNOMEDCT:128306009
GeneRIF:15623749
GeneRIF:16179416
Cataract associated with radiation and other physical influences
Other cataract[accessedResource: ICD9:366.8][accessDate: 10-05-2010]
Other cataract (disorder)[accessedResource: SNOMEDCT:193620000][accessDate: 10-05-2010]
Cataract (M-54510)
Cataract associated with other syndromes[accessedResource: ICD9:366.44][accessDate: 10-05-2010]
CATARACT W SYNDROME NEC[accessedResource: ICD9:366.44][accessDate: 10-05-2010]
SNOMEDCT:193608008
James Malone
GeneRIF:12079281
Cataract (morphologic abnormality)
Cat. - Cataract
Cataract (disorder)
GeneRIF:12475213
DOID:83
Cataract form (observable entity)
Cataract NOS
Lenticular opacity[accessedResource: SNOMEDCT:193570009][accessDate: 10-05-2010]
Lens opacity
GeneRIF:15286169
CATARACT NEC
cataract
GeneRIF:15249368
GeneRIF:12360425
GeneRIF:12426373
Cataract (morphologic abnormality)[accessedResource: SNOMEDCT:128306009][accessDate: 10-05-2010]
GeneRIF:9813099
Cataract form
SNOMEDCT:193620000
GeneRIF:15452067
Lenticular opacity
Cat. - Cataract[accessedResource: SNOMEDCT:193570009][accessDate: 10-05-2010]
Cataract NOS (disorder)
GeneRIF:15004872
Cataract (M-54510)[accessedResource: SNOMEDCT:128306009][accessDate: 10-05-2010]
SNOMEDCT:247053007
Partial or complete opacity of the crystalline lens of one or both eyes that decreases visual acuity and eventually results in blindness. Some cataracts appear in infancy or in childhood, but most develop in older individuals. (Sternberg Diagnostic Surgical Pathology, 3rd ed.)
GeneRIF:15347804
Other cataract NOS
CATARACT W RADIATION[accessedResource: ICD9:366.46][accessDate: 10-05-2010]
Cataract (disorder)[accessedResource: SNOMEDCT:193570009][accessDate: 10-05-2010]
GeneRIF:15322286
ICD9:366.8
ICD9:366.9
Other cataract
GeneRIF:15101113
GeneRIF:15064679
Unspecified cataract[accessedResource: ICD9:366.9][accessDate: 10-05-2010]
GeneRIF:16310481
Cataract associated with other syndromes (disorder)
Partial or complete opacity of the crystalline lens of one or both eyes that decreases visual acuity and eventually results in blindness. Some cataracts appear in infancy or in childhood, but most develop in older individuals. (Sternberg Diagnostic Surgical Pathology, 3rd ed.)[accessedResource: NCIt:C26713][accessDate: 10-05-2010]
GeneRIF:15342707
CATARACT NEC[accessedResource: ICD9:366.8][accessDate: 10-05-2010]
GeneRIF:12942049
ICD9:366.4
GeneRIF:11904300
GeneRIF:12724621
GeneRIF:15208569
GeneRIF:15709761
Other cataract NOS (disorder)
Cataract associated with radiation and other physical influences[accessedResource: ICD9:366.46][accessDate: 10-05-2010]
Lens opacity[accessedResource: SNOMEDCT:193570009][accessDate: 10-05-2010]
Other cataract (disorder)
GeneRIF:12356818
Unspecified cataract
Cataract form[accessedResource: SNOMEDCT:247053007][accessDate: 10-05-2010]
Cataract NOS (disorder)[accessedResource: SNOMEDCT:193623003][accessDate: 10-05-2010]
ICD9:366.46
NAMALWA
James Malone
Ele Holloway
JAX:008216
TBP-71Q-16 is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/008216.html
TBP-71Q-16
James Malone
true
%
A dimensionless ratio unit which denotes numbers as fractions of 100.
percent
FBbt:00000449
spindle cells
AMP
spindle cells[accessedResource: FBbt:00000449][accessDate: 10-05-2010]
AMP[accessedResource: FBbt:00000449][accessDate: 10-05-2010]
adult midgut precursor
James Malone
redundant now and is synonymous to material type.
true
population of an organism, organism, organism part, cell
Controlled terms for the state of the BioMaterial. Each state (BioSource, different BioSamples, and LabeledExtract) have MaterialTypes. Examples are population of an organism, organism, organism part, cell
obsolete_material type
FBbt:00005524
antEndoP2
antEndoP2[accessedResource: FBbt:00005524][accessDate: 10-05-2010]
anterior endoderm primordium
James Malone
aerial tissue[accessedResource: BTO:0001658][accessDate: 10-05-2010]
aerial part
James Malone
aerial body
Existing or growing in the air rather than in the ground or in water.
BTO:0001658
aerial body[accessedResource: BTO:0001658][accessDate: 10-05-2010]
aerial tissue
Existing or growing in the air rather than in the ground or in water.[accessedResource: BTO:0001658][accessDate: 10-05-2010]
A GM19239 is a cell line.
A GM19239 is all of the following: something that has as quality a male, something that derives from a Homo sapiens, and something that derives from a b cell.
Natural Language Generator 8th April 2010
James Malone
GM19239
InChIKey=HKSZLNNOFSGOKW-PULLEYNNDJ
An indolocarbazole alkaloid that has formula C28H26N4O3.
CHEBI:15738
James Malone
CN[C@@H]1C[C@H]2O[C@@](C)([C@@H]1OC)n1c3ccccc3c3c4CNC(=O)c4c4c5ccccc5n2c4c13
staurosporine
InChI=1/C28H26N4O3/c1-28-26(34-3)17(29-2)12-20(35-28)31-18-10-6-4-8-14(18)22-23-16(13-30-27(23)33)21-15-9-5-7-11-19(15)32(28)25(21)24(22)31/h4-11,17,20,26,29H,12-13H2,1-3H3,(H,30,33)/t17-,20-,26-,28+/m1/s1/f/h30H
Staurosporin
C28H26N4O3
http://www.ebi.ac.uk/efo/EFO_0001613
(5S,6R,7R,9R)-6-methoxy-5-methyl-7-methylamino-6,7,8,9,15,16-hexahydro-5H,14H-5,9-epoxy-4b,9a,15-triazadibenzo[b,h]cyclonona[1,2,3,4-jkl]cyclopenta[e]-as-indacen-14-one
metabolic syndrome
James Malone
thymocyte
An immature T cell located in the thymus.[accessedResource: CL:0000893][accessDate: 10-05-2010]
immature T cell
immature T-lymphocyte[accessedResource: CL:0000893][accessDate: 10-05-2010]
Tomasz Adamusiak
immature T lymphocyte
An immature T cell located in the thymus.
CL:0000893
immature T-cell[accessedResource: CL:0000893][accessDate: 10-05-2010]
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Unit_per_Milliliter
U/ml
unit per milliliter
293TsiLL
James Malone
A synovial sarcoma characterized by the presence of an epithelial or a spindle cell component only.[accessedResource: NCIt:C6534][accessDate: 10-05-2010]
NCIt:C6534
DOID:5495
Monophasic Sarcoma of the Synovium
Monophasic sarcoma of Synovium
James Malone
A synovial sarcoma characterized by the presence of an epithelial or a spindle cell component only.
monophasic synovial sarcoma
Monophasic Sarcoma of the Synovium[accessedResource: NCIt:C6534][accessDate: 10-05-2010]
Monophasic sarcoma of Synovium[accessedResource: DOID:5495][accessDate: 10-05-2010]
Totipotent cell cultured from early embryo. Have the advantage that following modification in vitrothey can be used to produce chimeric embryos and thus transgenic animals.[accessedResource: BTO:0001086][accessDate: 10-05-2010]
Totipotent cell cultured from early embryo. Have the advantage that following modification in vitrothey can be used to produce chimeric embryos and thus transgenic animals.
CL:0000352
James Malone
epiblast cell[accessedResource: CL:0000352][accessDate: 10-05-2010]
epiblast cell
BTO:0001086
ES cell
ES cell[accessedResource: BTO:0001086][accessDate: 10-05-2010]
embryonic stem cell
The laterally projecting region of each side of the lower or posterior part of the mammalian trunk formed by the lateral parts of the pelvis and upper part of the femur together with the fleshy parts covering them.[accessedResource: BTO:0001457][accessDate: 10-05-2010]
BTO:0001457
The lateral prominence of the pelvis from the waist to the thigh.[accessedResource: C64193][accessDate: 10-05-2010]
C64193
hip
The lateral prominence of the pelvis from the waist to the thigh.
The laterally projecting region of each side of the lower or posterior part of the mammalian trunk formed by the lateral parts of the pelvis and upper part of the femur together with the fleshy parts covering them.
James Malone
The hip is an animal body part which is the laterally projecting region of each side of the lower or posterior part of the mammalian trunk formed by the lateral parts of the pelvis and upper part of the femur together with the fleshy parts covering them.
https://www.cbil.upenn.edu/RADQuerier/php/displayStudy.php?study_id=449
Athero-protected regions of aorta.
undisturbed flow regions
Tomasz Adamusiak
Jie Zheng
The pharyngula is a developmental stage in embryonic development which follows the blastula, gastrula and neurula stages.
pharyngula stage
James Malone
HT
James Malone
Ele Holloway
MO_729
normalization testing design
Tomasz Adamusiak
SNU1
James Malone
Ele Holloway
ZFS:0000028
segmentation 26+ somites
James Malone
Any disease which affects part of the skeletal system.
skeletal system disease
James Malone
breast cancer cell line
Immunodeficiencies, Common Variable
Common variable hypogammaglobulinemia[accessedResource: SNOMEDCT:23238000][accessDate: 10-05-2010]
CVID[accessedResource: DOID:12177][accessDate: 10-05-2010]
GeneRIF:12759461
NCIt:C26725
GeneRIF:16007086
Common variable agammaglobulinemia
GeneRIF:15598813
CVID - Common variable immunodeficiency[accessedResource: SNOMEDCT:23238000][accessDate: 10-05-2010]
Common variable agammaglobulinemia[accessedResource: SNOMEDCT:23238000][accessDate: 10-05-2010]
Common variable agammaglobulinemia (disorder)
Acquired Agammaglobulinemia
acquired Agammaglobulinemia[accessedResource: DOID:12177][accessDate: 10-05-2010]
IMMUNODEFIC COMMON VARIABLE[accessedResource: MSH:D017074][accessDate: 10-05-2010]
CVI - Common variable immunodeficiency
COMMON VARIABL IMMUNODEF[accessedResource: ICD9:279.06][accessDate: 10-05-2010]
MSH:D017074
Acquired hypogammaglobulinaemia[accessedResource: SNOMEDCT:23238000][accessDate: 10-05-2010]
Late onset immunoglobulin deficiency[accessedResource: SNOMEDCT:23238000][accessDate: 10-05-2010]
Late onset immunoglobulin deficiency
common variable immunodeficiency
A hypogammaglobulinemia that is results in insufficient production of antibodies needed to respond to exposure of pathogens and is characterized by low Ig levels with phenotypically normal B cells that can proliferate but do not develop into Ig-producing cells. Patients with common variable immunodeficiency have marked reduction in serum levels of both immunoglobulin G (IgG) and immunoglobulin A (IgA); about half of these patients also have reduced immunoglobulin M (IgM).
Common variable hypogammaglobulinaemia[accessedResource: SNOMEDCT:23238000][accessDate: 10-05-2010]
James Malone
A hypogammaglobulinemia that is results in insufficient production of antibodies needed to respond to exposure of pathogens and is characterized by low Ig levels with phenotypically normal B cells that can proliferate but do not develop into Ig-producing cells. Patients with common variable immunodeficiency have marked reduction in serum levels of both immunoglobulin G (IgG) and immunoglobulin A (IgA); about half of these patients also have reduced immunoglobulin M (IgM).[accessedResource: DOID:12177][accessDate: 10-05-2010]
Sporadic hypogammaglobulinemia
Common variable agammaglobulinemia (disorder)[accessedResource: SNOMEDCT:23238000][accessDate: 10-05-2010]
GeneRIF:15507387
SNOMEDCT:23238000
Sporadic hypogammaglobulinemia[accessedResource: DOID:12177][accessDate: 10-05-2010]
CVAG
acquired hypogammaglobulinemia
GeneRIF:12100033
CVID - Common variable immunodeficiency
GeneRIF:15817684
CVI - Common variable immunodeficiency[accessedResource: SNOMEDCT:23238000][accessDate: 10-05-2010]
CVAG[accessedResource: SNOMEDCT:23238000][accessDate: 10-05-2010]
A primary immunodeficiency characterized by low levels or absence of all the immunoglobulin classes and lack of B-lymphocytes or plasma cells. It results in recurrent bacterial infections. Complications include autoimmune phenomena and cancer development.
Common variable agammaglobulinaemia
DOID:12177
A primary immunodeficiency characterized by low levels or absence of all the immunoglobulin classes and lack of B-lymphocytes or plasma cells. It results in recurrent bacterial infections. Complications include autoimmune phenomena and cancer development.[accessedResource: NCIt:C26725][accessDate: 10-05-2010]
Heterogeneous group of immunodeficiency syndromes characterized by hypogammaglobulinemia of most isotypes, variable B-cell defects, and the presence of recurrent bacterial infections.[accessedResource: MSH:D017074][accessDate: 10-05-2010]
Common variable hypogammaglobulinaemia
ICD9:279.06
CVID
Acquired hypogammaglobulinemia[accessedResource: SNOMEDCT:23238000][accessDate: 10-05-2010]
COMMON VARIABL IMMUNODEF
COMMON VARIABLE IMMUNODEFIC
Common variable agammaglobulinaemia[accessedResource: SNOMEDCT:23238000][accessDate: 10-05-2010]
Common Variable Immunodeficiencies[accessedResource: MSH:D017074][accessDate: 10-05-2010]
Heterogeneous group of immunodeficiency syndromes characterized by hypogammaglobulinemia of most isotypes, variable B-cell defects, and the presence of recurrent bacterial infections.
Common variable hypogammaglobulinemia
Acquired hypogammaglobulinaemia
GeneRIF:16007087
MHHPREB1
James Malone
Ele Holloway
true
BFO:function
A realizable entity [snap:RealizableEntity] the manifestation of which is an essentially end-directed activity of a continuant [snap:Continuant] entity in virtue of that continuant [snap:Continuant] entity being a specific kind of entity in the kind or kinds of contexts that it is made for.
http://www.ebi.ac.uk/efo/EFO_0001441
A function is an entity which is an essentially end-directed activity of a material entity in virtue of that entity being a specific kind of entity in the kind or kinds of contexts that it is made for. For example,
function
James Malone
insecticides
http://www.ebi.ac.uk/efo/EFO_0001825
CHEBI:24852
A substance used to destroy pests of the class Insecta.
insecticide
James Malone
InChIKey=RZJQGNCSTQAWON-UHFFFAOYAR
InChI=1/C17H14O4S/c1-22(19,20)14-9-7-12(8-10-14)15-11-21-17(18)16(15)13-5-3-2-4-6-13/h2-10H,11H2,1H3
Ceoxx
rofecoxib
http://www.ebi.ac.uk/efo/EFO_0001604
Vioxx
A butenolide that has formula C17H14O4S.
CHEBI:8887
3-phenyl-4-[4-(methylsulfonyl)phenyl]-2(5H)-furanone
4-[4-(methylsulfonyl)phenyl]-3-phenylfuran-2(5H)-one
CS(=O)(=O)c1ccc(cc1)C1=C(C(=O)OC1)c1ccccc1
A sulfone that has formula C17H14O4S.
C17H14O4S
LS1034
James Malone
Ele Holloway
hormone sexuelle
sex hormones
Sexualhormon
CHEBI:50112
Any hormone that is responsible for controlling sexual characteristics and reproductive function.
Sexualhormone
http://www.ebi.ac.uk/efo/EFO_0001883
sex hormone
hormones sexuelles
Geschlechtshormone
James Malone
Geschlechtshormon
http://www.arabidopsis.org/servlets/TairObject?id=1005158844&type=germplasm
CS57820 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158844&type=germplasm
CS57820
James Malone
Mitochondrial Respiratory Chain Deficiencies
RESPIRATORY CHAIN DEFIC MITOCHONDRIAL
mitochondrial disease/disorder[accessedResource: DOID:700][accessDate: 10-05-2010]
Diseases caused by abnormal function of the MITOCHONDRIA. They may be caused by mutations, acquired or inherited, in mitochondrial DNA or in nuclear genes that code for mitochondrial components. They may also be the result of acquired mitochondria dysfunction due to adverse effects of drugs, infections, or other environmental causes.
GeneRIF:15571233
GeneRIF:14746906
Mitochondrial Electron Transport Chain Deficiencies[accessedResource: MSH:D028361][accessDate: 10-05-2010]
mitochondrial disease/disorder
Deficiencies, Respiratory Chain
Mitochondrial Diseases[accessedResource: MSH:D028361][accessDate: 10-05-2010]
Deficiencies, Respiratory Chain[accessedResource: MSH:D028361][accessDate: 10-05-2010]
Phosphorylation Deficiency, Oxidative[accessedResource: MSH:D028361][accessDate: 10-05-2010]
Electron Transport Chain Deficiencies, Mitochondrial
Mitochondrial Disease[accessedResource: MSH:D028361][accessDate: 10-05-2010]
ELECTRON TRANSPORT CHAIN DEFIC MITOCHONDRIAL
Phosphorylation Deficiencies, Oxidative
MITOCHONDRIAL DIS[accessedResource: MSH:D028361][accessDate: 10-05-2010]
Diseases caused by abnormal function of the MITOCHONDRIA. They may be caused by mutations, acquired or inherited, in mitochondrial DNA or in nuclear genes that code for mitochondrial components. They may also be the result of acquired mitochondria dysfunction due to adverse effects of drugs, infections, or other environmental causes.[accessedResource: MSH:D028361][accessDate: 10-05-2010]
Respiratory Chain Deficiency
Mitochondrial Disorders
GeneRIF:12111367
hyperglycaemia
mitochondrial disease
Disorders, Mitochondrial[accessedResource: MSH:D028361][accessDate: 10-05-2010]
GeneRIF:14506721
Mitochondrial Diseases
OX PHOS DEFIC
James Malone
Respiratory Chain Deficiency[accessedResource: MSH:D028361][accessDate: 10-05-2010]
OX PHOS DEFIC[accessedResource: MSH:D028361][accessDate: 10-05-2010]
MITOCHONDRIAL DIS
Deficiency, Oxidative Phosphorylation
Deficiencies, Oxidative Phosphorylation[accessedResource: MSH:D028361][accessDate: 10-05-2010]
ELECTRON TRANSPORT CHAIN DEFIC MITOCHONDRIAL[accessedResource: MSH:D028361][accessDate: 10-05-2010]
RESPIRATORY CHAIN DEFIC MITOCHONDRIAL[accessedResource: MSH:D028361][accessDate: 10-05-2010]
Mitochondrial Respiratory Chain Deficiencies[accessedResource: MSH:D028361][accessDate: 10-05-2010]
mitochondrial disorder
DOID:700
MSH:D028361
calcium channel blockers
http://www.ebi.ac.uk/efo/EFO_0001867
CHEBI:38215
One of a class of drugs that acts by selective inhibition of calcium influx through cell membranes or on the release and binding of calcium in intracellular pools.
calcium channel blocker
James Malone
true
ng/ml
nanogram per milliliter
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158652&type=germplasm
CS57628 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158652&type=germplasm
CS57628
James Malone
SW620
James Malone
Ele Holloway
MO_59
Family history is a form of clinicaly history specifically about relevant aspects of genetic preconditions or family member's clinical history.
family history
Tomasz Adamusiak
Jie Zheng
James Malone
Gall-like structures on the roots of legumes that contain symbiotic nitrogen-fixing bacteria.
nodule
root nodule
Gall-like structures on the roots of legumes that contain symbiotic nitrogen-fixing bacteria.[accessedResource: BTO:0001190][accessDate: 10-05-2010]
BTO:0001190
James Malone
nodule[accessedResource: BTO:0001190][accessDate: 10-05-2010]
PO:0003023
MAT:0000353
PO:0008037
BTO:0001228
The embryonic product of the germination of a seed; the young shoot and root axis.
The embryonic product of the germination of a seed; the young shoot and root axis.[accessedResource: BTO:0001228][accessDate: 10-05-2010]
seedling
James Malone
GM12875
James Malone
proximal renal artery
Tomasz Adamusiak
Jie Zheng
BTO:0001435
A human upper limb; especially: the part between the shoulder and the wrist.
NCIt:C32141
A human upper limb; especially: the part between the shoulder and the wrist.[accessedResource: BTO:0001435][accessDate: 10-05-2010]
James Malone
The portion of the upper extremity between the shoulder and the elbow. For clinical purposes this term is also used to refer to the whole superior limb.[accessedResource: NCIt:C32141][accessDate: 10-05-2010]
arm
The portion of the upper extremity between the shoulder and the elbow. For clinical purposes this term is also used to refer to the whole superior limb.
ICD9:030
James Malone
LEPROSY NOS[accessedResource: ICD9:030.9][accessDate: 10-05-2010]
ICD9:030.9
GeneRIF:15880118
Leprosy NOS (disorder)[accessedResource: SNOMEDCT:186339006][accessDate: 10-05-2010]
GeneRIF:15072129
Mycobacterium leprae infection
GeneRIF:15755200
Leprosy (disorder)
GeneRIF:14737177
[X]Leprosy, unspecified (disorder)[accessedResource: SNOMEDCT:187316006][accessDate: 10-05-2010]
[X]Leprosy, unspecified[accessedResource: SNOMEDCT:187316006][accessDate: 10-05-2010]
[X]Leprosy, unspecified (disorder)
Leprosy, unspecified
GeneRIF:15306847
Hansen's disease
leprosy
Other specified leprosy[accessedResource: ICD9:030.8][accessDate: 10-05-2010]
Hansen's disease[accessedResource: SNOMEDCT:81004002][accessDate: 10-05-2010]
Leprosy NOS (disorder)
SNOMEDCT:186339006
Mycobacterium leprae infection[accessedResource: SNOMEDCT:81004002][accessDate: 10-05-2010]
Other specified leprosy
LEPROSY NEC[accessedResource: ICD9:030.8][accessDate: 10-05-2010]
SNOMEDCT:81004002
GeneRIF:12646604
SNOMEDCT:187316006
Leprosy, unspecified[accessedResource: ICD9:030.9][accessDate: 10-05-2010]
DOID:1024
Leprosy, NOS
ICD9:030.8
LEPROSY NEC
GeneRIF:15356162
Infection due to Mycobacterium leprae
GeneRIF:12447749
Infection due to Mycobacterium leprae[accessedResource: SNOMEDCT:81004002][accessDate: 10-05-2010]
[X]Leprosy, unspecified
Leprosy (disorder)[accessedResource: SNOMEDCT:81004002][accessDate: 10-05-2010]
Colliculus of caudate nucleus[accessedResource: FMAID:61889][accessDate: 10-05-2010]
Colliculus of caudate nucleus
accumbens nucleus
A nucleus forming the floor of the caudal part of the anterior prolongation of the lateral ventricle of the brain.
NCIt:C52733
MA:0000892
FMAID:61889
Nucleus accumbens septi[accessedResource: FMAID:61889][accessDate: 10-05-2010]
nucleus accumbens whole
A nucleus forming the floor of the caudal part of the anterior prolongation of the lateral ventricle of the brain.[accessedResource: BTO:0001862][accessDate: 10-05-2010]
Nucleus accumbens septi
MAT:0000512
James Malone
BTO:0001862
A type of malignant cancer that arises from epithelial cells tending to infiltrate the surrounding tissues and give rise to metastases.
carcinoma
James Malone
megalokaryocyte[accessedResource: CL:0000556][accessDate: 10-05-2010]
A giant cell 50 to 100 micron in diameter, with a greatly lobulated nucleus, found in the bone marrow; mature blood platelets are released from its cytoplasm.[accessedResource: CL:0000556][accessDate: 10-05-2010]
BTO:0000843
A large cell that has a lobulated nucleus, is found especially in the bone marrow, and is the source of blood platelets.[accessedResource: BTO:0000843][accessDate: 10-05-2010]
megacaryocyte[accessedResource: BTO:0000843][accessDate: 10-05-2010]
megakaryocyte
James Malone
CL:0000556
megalocaryocyte
A giant cell 50 to 100 micron in diameter, with a greatly lobulated nucleus, found in the bone marrow; mature blood platelets are released from its cytoplasm.
megalokaryocyte
A large cell that has a lobulated nucleus, is found especially in the bone marrow, and is the source of blood platelets.
megacaryocyte
megalocaryocyte[accessedResource: CL:0000556][accessDate: 10-05-2010]
MCIXC
James Malone
Ele Holloway
HCC38
James Malone
phenothiazine neuroleptics
phenothiazine antipsychotics
phenothiazine antipsychotic drugs
http://www.ebi.ac.uk/efo/EFO_0001864
CHEBI:37930
phenothiazine antipsychotic drug
James Malone
MAT:0000203
Paired dorsal 'appendage' of the adult mesothoracic segment. It is a freely movable, capitate stalk. It develops from the dorsal mesothoracic disc. It is used for flight balance.
FBbt:00004783
Paired dorsal 'appendage' of the adult mesothoracic segment. It is a freely movable, capitate stalk. It develops from the dorsal mesothoracic disc. It is used for flight balance.[accessedResource: FBbt:00004783][accessDate: 10-05-2010]
James Malone
balancer organ[accessedResource: MAT:0000203][accessDate: 10-05-2010]
balancer organ
haltere
Ele Holloway
HCC1599
James Malone
NCIt:C2985
James Malone
GeneRIF:12027924
Diabetes[accessedResource: NCIt:C2985][accessDate: 10-05-2010]
GeneRIF:15699510
GeneRIF:15563983
GeneRIF:15699511
diabetes
A heterogeneous group of disorders characterized by HYPERGLYCEMIA and GLUCOSE INTOLERANCE.
GeneRIF:12673582
GeneRIF:15639198
diabetes mellitus
GeneRIF:12783844
GeneRIF:15609025
GeneRIF:16098926
A metabolic disorder characterized by abnormally high blood sugar levels due to diminished production of insulin or insulin resistance/desensitization.
GeneRIF:11896938
SNOMEDCT:73211009
GeneRIF:15126243
GeneRIF:15699513
Diabetes mellitus, NOS
GeneRIF:12955714
MSH:D003920
GeneRIF:15251864
GeneRIF:15554360
GeneRIF:15790730
GeneRIF:12738401
GeneRIF:15281346
GeneRIF:15557196
GeneRIF:11822825
GeneRIF:12062816
GeneRIF:14714273
GeneRIF:14675060
GeneRIF:14716305
GeneRIF:12062854
GeneRIF:15800961
GeneRIF:12679462
GeneRIF:12118252
GeneRIF:11774208
GeneRIF:15699509
GeneRIF:11912494
GeneRIF:15940393
GeneRIF:11947965
GeneRIF:15476949
GeneRIF:12765847
DM - Diabetes mellitus[accessedResource: SNOMEDCT:73211009][accessDate: 10-05-2010]
Diabetes NOS[accessedResource: DOID:9351][accessDate: 10-05-2010]
GeneRIF:14658759
GeneRIF:12536206
GeneRIF:12095538
GeneRIF:12753312
GeneRIF:12529387
Diabetes mellitus (disorder)[accessedResource: SNOMEDCT:73211009][accessDate: 10-05-2010]
GeneRIF:12738397
GeneRIF:14998943
GeneRIF:12230824
A metabolic disorder characterized by abnormally high blood sugar levels due to diminished production of insulin or insulin resistance/desensitization.[accessedResource: NCIt:C2985][accessDate: 10-05-2010]
GeneRIF:11980626
GeneRIF:15662218
GeneRIF:12490143
GeneRIF:15355441
GeneRIF:12649573
GeneRIF:12012276
GeneRIF:16260427
GeneRIF:15699497
GeneRIF:11938023
GeneRIF:15516784
GeneRIF:15646011
GeneRIF:16002993
GeneRIF:15221640
GeneRIF:12148086
GeneRIF:12207164
GeneRIF:15286433
GeneRIF:14654370
GeneRIF:12679473
GeneRIF:15258348
GeneRIF:15173029
GeneRIF:12748907
GeneRIF:12719374
Diabetes mellitus (disorder)
GeneRIF:11882518
GeneRIF:15237707
GeneRIF:15156314
GeneRIF:15156315
GeneRIF:14674716
GeneRIF:15831366
GeneRIF:12639765
GeneRIF:11668623
GeneRIF:15128745
GeneRIF:15112906
DOID:9351
GeneRIF:12021129
GeneRIF:12787913
GeneRIF:12920574
GeneRIF:12706323
DM - Diabetes mellitus
A heterogeneous group of disorders characterized by HYPERGLYCEMIA and GLUCOSE INTOLERANCE.[accessedResource: MSH:D003920][accessDate: 10-05-2010]
GeneRIF:15699512
GeneRIF:14726620
GeneRIF:15538935
GeneRIF:12898475
GeneRIF:12021133
GeneRIF:14631138
Diabetes NOS
GeneRIF:12221327
GeneRIF:15046742
GeneRIF:12200076
GeneRIF:11916624
GeneRIF:14641003
GeneRIF:11916625
GeneRIF:12584444
GeneRIF:15959417
GeneRIF:12618277
GeneRIF:15166380
GeneRIF:15625086
GeneRIF:12574207
GeneRIF:16087164
GeneRIF:15123681
GeneRIF:12039697
GeneRIF:15797963
GeneRIF:15367890
GeneRIF:14766207
Diabetes mellitus, NOS[accessedResource: SNOMEDCT:73211009][accessDate: 10-05-2010]
GeneRIF:14764811
GeneRIF:11796176
GeneRIF:12500218
GeneRIF:11888844
GeneRIF:15887858
ICD9:250
GeneRIF:12589429
GeneRIF:11875060
GeneRIF:15070960
FBbt:00004011
dorsomedial neurosecretory cell
James Malone
C3A
James Malone
Ele Holloway
cow
http://www.ebi.ac.uk/efo/EFO_0002634
Bos taurus, commonly named cattle.
Bos taurus
James Malone
SUM52PE
James Malone
Wikipedia definition, modified by editor.
A twin study is a study design in behavior genetics which aid the study of individual differences between genetically identical twins by highlighting the role of environmental and genetic causes on behavior.
twin study
Tomasz Adamusiak
James Malone
mouse
mice
http://www.ebi.ac.uk/efo/EFO_0002644
Mus (commonly mice) is a small mammal belonging to the order of rodents.
Mus
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158777&type=germplasm
CS57753 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158777&type=germplasm
CS57753
James Malone
intracranial hemorrhage NOS (disorder)[accessedResource: DOID:1126][accessDate: 10-05-2010]
GeneRIF:15331795
Posterior Fossa Hemorrhages[accessedResource: MSH:D020300][accessDate: 10-05-2010]
ICD9:432.9
intracranial hemorrhage NOS (disorder)
SNOMEDCT:1386000
Unspecified intracranial hemorrhage
Bleeding within the SKULL, including hemorrhages in the brain and the three membranes of MENINGES. The escape of blood often leads to the formation of HEMATOMA in the cranial epidural, subdural, and subarachnoid spaces.[accessedResource: MSH:D020300][accessDate: 10-05-2010]
Posterior Fossa Hemorrhages
MSH:D020300
Intracranial haemorrhage
intracranial hemorrhage NOS
DOID:1126
intracranial hemorrhage (disorder)[accessedResource: DOID:1126][accessDate: 10-05-2010]
Intracranial haemorrhage[accessedResource: SNOMEDCT:1386000][accessDate: 10-05-2010]
Brain Hemorrhages
SNOMEDCT:195178005
Intracranial hemorrhage
Hemorrhage, Posterior Fossa
Intracranial haemorrhage NOS
INTRACRANIAL HEMORR NOS[accessedResource: ICD9:432.9][accessDate: 10-05-2010]
Unspecified intracranial hemorrhage[accessedResource: ICD9:432.9][accessDate: 10-05-2010]
intracranial hemorrhage (disorder)
Hemorrhage, Posterior Fossa[accessedResource: MSH:D020300][accessDate: 10-05-2010]
Brain Hemorrhage
INTRACRANIAL HEMORR NOS
Intracranial haemorrhage NOS[accessedResource: SNOMEDCT:195178005][accessDate: 10-05-2010]
Hemorrhage, Brain[accessedResource: MSH:D020300][accessDate: 10-05-2010]
Bleeding within the SKULL, including hemorrhages in the brain and the three membranes of MENINGES. The escape of blood often leads to the formation of HEMATOMA in the cranial epidural, subdural, and subarachnoid spaces.
Hemorrhages, Brain[accessedResource: MSH:D020300][accessDate: 10-05-2010]
Intracranial hemorrhage[accessedResource: SNOMEDCT:1386000][accessDate: 10-05-2010]
James Malone
Intracranial Hemorrhages
intracranial Hemorrhages[accessedResource: DOID:1126][accessDate: 10-05-2010]
FBbt:00005614
embryonic epipharynx
James Malone
MO_591
biomaterial provider
Tomasz Adamusiak
HPL1
James Malone
Ele Holloway
SW1353
James Malone
Ele Holloway
2.4
Jie Zheng
Tomasz Adamusiak
obsolete_cultivar
James Malone
MO_124
true
A cultivated plant variety selected and given a name because it has desirable characteristics that distinguish it from otherwise similar plants of the same species.
using strain to hang cultivar subclasses in future
ChaGoK1
James Malone
Ele Holloway
Glioblastomas[accessedResource: MSH:D005909][accessDate: 10-05-2010]
Glioblastomas, Giant Cell
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures.[accessedResource: MSH:D005909][accessDate: 10-05-2010]
Grade IV Astrocytomas
Glioblastoma
DOID:3074
Glioblastoma Multiforme
A rare histological variant of glioblastoma (WHO grade IV) with a predominance of bizarre, multinucleated giant cells, an occasionally abundant stromal reticulin network, and a high frequency of TP53 mutations. (WHO)
Monstrocellular sarcoma [obs]
obsolete_brain tumor glioblastoma
true
Giant cell glioblastoma (morphologic abnormality)[accessedResource: SNOMEDCT:44529004][accessDate: 10-05-2010]
Glioblastomas, Giant Cell[accessedResource: MSH:D005909][accessDate: 10-05-2010]
Giant cell glioblastoma (morphologic abnormality)
Astrocytomas, Grade IV[accessedResource: MSH:D005909][accessDate: 10-05-2010]
NCIt:C4325
Monstrocellular sarcoma [obs][accessedResource: DOID:3074][accessDate: 10-05-2010]
Glioblastoma Multiforme[accessedResource: MSH:D005909][accessDate: 10-05-2010]
Astrocytoma, Grade IV
Glioblastoma, Giant Cell[accessedResource: MSH:D005909][accessDate: 10-05-2010]
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures.
MSH:D005909
A rare histological variant of glioblastoma (WHO grade IV) with a predominance of bizarre, multinucleated giant cells, an occasionally abundant stromal reticulin network, and a high frequency of TP53 mutations. (WHO)[accessedResource: NCIt:C4325][accessDate: 10-05-2010]
Glioblastomas
Giant cell glioblastoma
Glioblastoma[accessedResource: MSH:D005909][accessDate: 10-05-2010]
SNOMEDCT:44529004
Grade IV Astrocytoma[accessedResource: MSH:D005909][accessDate: 10-05-2010]
Tomasz Adamusiak
James Malone
MO_846
kilogram
kg
true
A kilogram is a mass unit which is equal to the mass of the International Prototype Kilogram kept by the BIPM at Svres, France.
http://www.ebi.ac.uk/efo/EFO_0001686
Jie Zheng
A mass unit which is equal to the mass of the International Prototype Kilogram kept by the BIPM at Svres, France.
BTO:0000034
GRO:0000231
A group of cells at the tip of the stem and root that give rise by cell division to the primary tissues and are ultimately responsible for the structural organization of the entire primary plant body.
GRO:0000231[accessedResource: BTO:0000034][accessDate: 10-05-2010]
A group of cells at the tip of the stem and root that give rise by cell division to the primary tissues and are ultimately responsible for the structural organization of the entire primary plant body.[accessedResource: BTO:0000034][accessDate: 10-05-2010]
apical meristem
James Malone
ZFS:0000003
cleavage 4-cell
James Malone
An extrapolation into the future of data into a class with specified label.
classifier prediction
James Malone
NCI Metathesaurus: C0483368
MedlinePlus: 001381
Human granulocytic ehrlichiosis
human granulocytic anaplasmosis
James Malone
PATO:0001338
The total number of individuals inhabiting a particular region or area.
A biological sex quality inhering in a population of multiple sexes.
A biological sex quality inhering in a population of multiple sexes.[accessedResource: PATO:0001338][accessDate: 10-05-2010]
mixed sex population
James Malone
supraoptic nucleus
James Malone
Ele Holloway
retinal ganglion
true
A derived unit which is a standard measure of the energy imparted by ionizing radiation to unit mass of matter such as tissue.
abosrbed dose unit
ZFA:0000027
paired fin skeleton
appendicular skeleton
OntologyMappingImporter following MAT:0000278
TAO:0000027
appendicular skeleton[accessedResource: ZFA:0000027][accessDate: 10-05-2010]
James Malone
MAT:0000278
use synonym chemical compound
true
obsolete_compound factor
James Malone
EMAPA:18028
Subdivision of free lower limb, which is the proximal segment of a lower limb and links the free lower limb to the trunk; it is demarcated by the plane of the surface of the acetabular fossa from the free lower limb; together with the free lower limb, it constitutes the lower limb. Examples: There are only two instances, right and left pelvic girdles.[accessedResource: FMAID:16581][accessDate: 10-05-2010]
FMAID:16581
pelvic girdle
EHDAA:7149
MA:0000293
MAT:0000182
Subdivision of free lower limb, which is the proximal segment of a lower limb and links the free lower limb to the trunk; it is demarcated by the plane of the surface of the acetabular fossa from the free lower limb; together with the free lower limb, it constitutes the lower limb. Examples: There are only two instances, right and left pelvic girdles.
CORL279
James Malone
Ele Holloway
JAX:004435
B6.Cg-Tg(SOD1-G93A)1Gur/J is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/004435.html
B6.Cg-Tg(SOD1-G93A)1Gur/J
James Malone
segmentation stage
James Malone
Pituitary insufficiency
Hypopituitarism: [NOS] or [Sheehan's syndrome] or [Simmond's disease] or [Panhypopituitarism][accessedResource: DOID:9406][accessDate: 10-05-2010]
hypopituitarism
NCIt:C62591
Postpartum Panhypopituitarism
Hyposecretion Syndrome, Anterior Pituitary[accessedResource: MSH:D007018][accessDate: 10-05-2010]
Pituitary Insufficiency, Postpartum
HYPOSECRET SYNDROME ANTERIOR PITUITARY[accessedResource: MSH:D007018][accessDate: 10-05-2010]
Pituitary hypofunction[accessedResource: DOID:9406][accessDate: 10-05-2010]
SIMMONDS DIS
Hypopituitarism NOS
Hypopituitarism: [NOS] or [Sheehan's syndrome] or [Simmond's disease] or [Panhypopituitarism]
ANTERIOR PITUITARY HYPOSECRET SYNDROME
Insufficiency, Pituitary[accessedResource: MSH:D007018][accessDate: 10-05-2010]
ADENOHYPOPHYSEAL HYPOSECRET[accessedResource: MSH:D007018][accessDate: 10-05-2010]
GeneRIF:15928241
SIMMONDS DIS[accessedResource: MSH:D007018][accessDate: 10-05-2010]
Pituitary deficiency
MSH:D007018
Pituitary failure[accessedResource: SNOMEDCT:74728003][accessDate: 10-05-2010]
Deficient secretion of one or more pituitary hormones[accessedResource: SNOMEDCT:74728003][accessDate: 10-05-2010]
Panhypopituitarism, Postpartum[accessedResource: MSH:D007018][accessDate: 10-05-2010]
Hypopituitarism (disorder)[accessedResource: DOID:9406][accessDate: 10-05-2010]
Postpartum Hypopituitarism
Pituitary failure
GeneRIF:15800844
SNOMEDCT:74728003
GeneRIF:12651888
GeneRIF:14714741
Hypopituitarism NOS (disorder)
Hyposecretion, Adenohypophyseal[accessedResource: MSH:D007018][accessDate: 10-05-2010]
Sheehan's Syndrome[accessedResource: MSH:D007018][accessDate: 10-05-2010]
Hypopituitarism (disorder)
Sheehans Syndrome[accessedResource: MSH:D007018][accessDate: 10-05-2010]
Hyposecretion Syndrome, Anterior Pituitary
ADENOHYPOPHYSEAL HYPOSECRET
GeneRIF:14581620
Syndrome, Sheehan
GeneRIF:12717343
SNOMEDCT:237681002
Postpartum Pituitary Insufficiency[accessedResource: MSH:D007018][accessDate: 10-05-2010]
Pituitary hypofunction
Panhypopituitarism[accessedResource: MSH:D007018][accessDate: 10-05-2010]
Panhypopituitarism
A condition of diminution or cessation of secretion of one or more hormones from the anterior pituitary gland. This may result from surgical or radiation ablation, non-secretory pituitary neoplasms, metastatic tumors, infarction, pituitary apoplexy, infiltrative or granulomatous processes, and other conditions.[accessedResource: NCIt:C62591][accessDate: 10-05-2010]
Sheehan Syndrome[accessedResource: MSH:D007018][accessDate: 10-05-2010]
DOID:9406
Pituitary insufficiency, NOS
Deficient secretion of one OR more pituitary hormones
Postpartum Hypopituitarism[accessedResource: MSH:D007018][accessDate: 10-05-2010]
Sheehans Syndrome
A condition of diminution or cessation of secretion of one or more hormones from the anterior pituitary gland. This may result from surgical or radiation ablation, non-secretory pituitary neoplasms, metastatic tumors, infarction, pituitary apoplexy, infiltrative or granulomatous processes, and other conditions.
Diminution or cessation of secretion of one or more hormones from the anterior pituitary gland (including LH; FOLLICLE STIMULATING HORMONE; SOMATOTROPIN; and CORTICOTROPIN). This may result from surgical or radiation ablation, non-secretory PITUITARY NEOPLASMS, metastatic tumors, infarction, PITUITARY APOPLEXY, infiltrative or granulomatous processes, and other conditions.
Hypopituitarism NOS[accessedResource: SNOMEDCT:237681002][accessDate: 10-05-2010]
Hypopituitarism NOS (disorder)[accessedResource: SNOMEDCT:237681002][accessDate: 10-05-2010]
Simmond's Disease[accessedResource: MSH:D007018][accessDate: 10-05-2010]
James Malone
Pituitary deficiency[accessedResource: SNOMEDCT:74728003][accessDate: 10-05-2010]
Sheehan's Syndrome
Diminution or cessation of secretion of one or more hormones from the anterior pituitary gland (including LH; FOLLICLE STIMULATING HORMONE; SOMATOTROPIN; and CORTICOTROPIN). This may result from surgical or radiation ablation, non-secretory PITUITARY NEOPLASMS, metastatic tumors, infarction, PITUITARY APOPLEXY, infiltrative or granulomatous processes, and other conditions.[accessedResource: MSH:D007018][accessDate: 10-05-2010]
Pituitary insufficiency, NOS[accessedResource: SNOMEDCT:74728003][accessDate: 10-05-2010]
Simmond's Disease
Hyposecretion, Adenohypophyseal
Simmonds Disease
Simmonds' Disease[accessedResource: MSH:D007018][accessDate: 10-05-2010]
Oligodendroglioma, Childhood[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Adult Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Mixed Astrocytic-Oligodendroglial Tumor
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroglioma, Adult
Mixed Astrocytic-Oligodendroglial Neoplasm[accessedResource: NCIt:C4050][accessDate: 10-05-2010]
Anaplastic Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
A WHO grade II tumor composed of a conspicuous mixture of two distinct neoplastic cell types morphologically resembling the tumor cells in oligodendroglioma and diffuse astrocytoma. (WHO)[accessedResource: NCIt:C4050][accessDate: 10-05-2010]
Oligodendroglioma, Well Differentiated
Oligodendroblastoma
Oligodendroblastomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroglioma, Well-Differentiated[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendrogliomas, Well-Differentiated[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Adult Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Mixed Oligodendroglioma-Astrocytomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
WHO grade II mixed glioma[accessedResource: DOID:7912][accessDate: 10-05-2010]
Well-Differentiated Oligodendrogliomas
Mixed Oligodendroglioma-Astrocytomas
Childhood Oligodendrogliomas
Mixed Oligodendroglioma Ependymoma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
oligoastroglioma
MSH:D009837
WELL DIFFER OLIGODENDROGLIOMA
Oligodendroblastomas
NCIt:C4050
Oligodendroblastoma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroglioma, Childhood
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)
Mixed Astrocytic-Oligodendroglial Neoplasm
Oligodendroglioma, Anaplastic[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Mixed Oligo-Astrocytoma[accessedResource: NCIt:C4050][accessDate: 10-05-2010]
Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
WHO grade II Mixed Glioma
A WHO grade II tumor composed of a conspicuous mixture of two distinct neoplastic cell types morphologically resembling the tumor cells in oligodendroglioma and diffuse astrocytoma. (WHO)
WELL DIFFER OLIGODENDROGLIOMA[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroglioma
Anaplastic Oligodendroglioma
Mixed Oligodendroglioma Ependymoma
Oligodendrogliomas, Anaplastic
Oligodendrogliomas
Mixed Oligodendroglioma-Astrocytoma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
DOID:7912
Adult Oligodendrogliomas
James Malone
mixed Oligodendroglioma-astrocytoma
Mixed Astrocytic-Oligodendroglial Tumor[accessedResource: NCIt:C4050][accessDate: 10-05-2010]
Mixed Oligo-Astrocytoma
Oligodendrogliomas, Childhood[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Mixed Oligodendroglioma-Ependymomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Mixed Oligodendroglioma-Ependymomas
oligoastrocytoma
tectum opticum[accessedResource: ZFA:0001353][accessDate: 10-05-2010]
dorsal midbrain
tectum opticum
TAO:0001353
EMAPA:19051
tectum mesencephali[accessedResource: BTO:0001793][accessDate: 10-05-2010]
tectum
optic tectum[accessedResource: ZFA:0001353][accessDate: 10-05-2010]
MA:0000211
Midbrain tectum
optic tectum
tectal lobe
James Malone
mesencephalic tectum
The dorsal part of the midbrain including the corpora quadrigemina.
MFO:0080060
ZFA:0001353
Multi-tissue structure that is the dorsal part of the midbrain and develops from the alar plate and is the most complex layered structure in the zebrafish brain.[accessedResource: ZFA:0001353][accessDate: 10-05-2010]
The dorsal part of the midbrain including the corpora quadrigemina.[accessedResource: BTO:0001793][accessDate: 10-05-2010]
Midbrain tectum[accessedResource: FMAID:83902][accessDate: 10-05-2010]
mesencephalic tectum[accessedResource: ZFA:0001353][accessDate: 10-05-2010]
BTO:0001793
Multi-tissue structure that is the dorsal part of the midbrain and develops from the alar plate and is the most complex layered structure in the zebrafish brain.
Neuraxis tectum[accessedResource: FMAID:83902][accessDate: 10-05-2010]
MAT:0000451
Neuraxis tectum
tectal lobe[accessedResource: ZFA:0001353][accessDate: 10-05-2010]
FMAID:83902
dorsal midbrain[accessedResource: ZFA:0001353][accessDate: 10-05-2010]
tectum mesencephali
Progressive Supranuclear Ophthalmoplegia[accessedResource: NIFSTD:birnlex_12697][accessDate: 10-05-2010]
supranuclear palsy, progressive
Ele Holloway
Progressive supranuclear ophthalmoplegia
Tomasz Adamusiak
Steele-Richardson-Olszewski Disease
progressive supranuclear ophthalmoplegia (disorder)[accessedResource: DOID:678][accessDate: 10-05-2010]
Steele-Richardson-Olszewski Disease[accessedResource: NIFSTD:birnlex_12697][accessDate: 10-05-2010]
A degenerative disease of the central nervous system characterized by balance difficulties; OCULAR MOTILITY DISORDERS (supranuclear ophthalmoplegia); DYSARTHRIA; swallowing difficulties; and axial DYSTONIA. Onset is usually in the fifth decade and disease progression occurs over several years. Pathologic findings include neurofibrillary degeneration and neuronal loss in the dorsal MESENCEPHALON; SUBTHALAMIC NUCLEUS; RED NUCLEUS; pallidum; dentate nucleus; and vestibular nuclei (MeSH).
DOID:678
Steele-Richardson-Olszewski Syndrome
progressive supranuclear ophthalmoplegia (disorder)
NIFSTD:birnlex_12697
James Malone
A degenerative disease of the central nervous system characterized by balance difficulties; OCULAR MOTILITY DISORDERS (supranuclear ophthalmoplegia); DYSARTHRIA; swallowing difficulties; and axial DYSTONIA. Onset is usually in the fifth decade and disease progression occurs over several years. Pathologic findings include neurofibrillary degeneration and neuronal loss in the dorsal MESENCEPHALON; SUBTHALAMIC NUCLEUS; RED NUCLEUS; pallidum; dentate nucleus; and vestibular nuclei (MeSH).[accessedResource: NIFSTD:birnlex_12697][accessDate: 10-05-2010]
Steele-Richardson-Olszewski Syndrome[accessedResource: NIFSTD:birnlex_12697][accessDate: 10-05-2010]
JCRB1081
MS-1-L
MS-1
James Malone
Ele Holloway
NCIt:C14274
SIV
An HIV-like virus that infects monkeys, chimpanzees, and other non-human primates. (AIDS Info HIV Glossary)
SIV[accessedResource: NCIt:C14274][accessDate: 10-05-2010]
An HIV-like virus that infects monkeys, chimpanzees, and other non-human primates. (AIDS Info HIV Glossary)[accessedResource: NCIt:C14274][accessDate: 10-05-2010]
simian immunodeficiency virus
James Malone
James Malone
Human Caucasian lung small cell carcinoma cell line.
Ele Holloway
Human Caucasian lung small cell carcinoma cell line.[accessedResource: BTO:0000679][accessDate: 10-05-2010]
HTB-119
BTO:0000679
H69
RGD:1578695
Syracuse High Avoidance
James Malone
A measurement of the survival rate for a group of individuals suffering from a disease.
overall survival
James Malone
BTO:0001107
A precursor to an adipocyte.
A precursor to an adipocyte.[accessedResource: BTO:0001107][accessDate: 10-05-2010]
preadipocyte
James Malone
myeloid neoplasm
MAT:0000199
MA:0000058
white fat
James Malone
fibrosarcoma
NCIH441
James Malone
Ele Holloway
HOS
James Malone
Ele Holloway
n-DPA
acide valproique
acido valproico
CHEBI:39867
CCCC(CCC)C(O)=O
Depakene
valproic acid
2-PROPYL-PENTANOIC ACID
Di-n-propylessigsaeure
di-n-propylacetic acid
2-propylvaleric acid
2-propylpentanoic acid
C8H16O2
James Malone
InChIKey=NIJJYAXOARWZEE-BGGKNDAXCP
InChI=1/C8H16O2/c1-3-5-7(6-4-2)8(9)10/h7H,3-6H2,1-2H3,(H,9,10)/f/h9H
http://www.ebi.ac.uk/efo/EFO_0001634
dipropylacetic acid
2-n-propyl-n-valeric acid
4-heptanecarboxylic acid
acidum valproicum
DPA
Valproinsaeure
PC-6
James Malone
Ele Holloway
SUM1315MO2
James Malone
CaCl2
InChI=1/Ca.2ClH/h;2*1H/q+2;;/p-2/fCa.2Cl/h;2*1h/qm;2*-1
[Cl-].[Cl-].[Ca++]
calcium dichloride
An inorganic chloride salt that has formula CaCl2.
InChIKey=UXVMQQNJUSDDNG-HQDHFEKBCV
calcium chloride
Calcium chloride anhydrous
(2R,3R,4R,5R)-hexane-1,2,3,4,5,6-hexol
InChIKey=FBPFZTCFMRRESA-KVTDHHQDBH
CHEBI:16899
OC[C@@H](O)[C@@H](O)[C@H](O)[C@H](O)CO
Mannitol
James Malone
(2R,3R,4R,5R)-Hexane-1,2,3,4,5,6-hexaol
Osmitrol
C6H14O6
InChI=1/C6H14O6/c7-1-3(9)5(11)6(12)4(10)2-8/h3-12H,1-2H2/t3-,4-,5-,6-/m1/s1
http://www.ebi.ac.uk/efo/EFO_0001525
A mannitol that has formula C6H14O6.
The D-enantiomer of mannitol.
D-mannitol
James Malone
HCC2185
antilipemic
antihyperlipidemic
CHEBI:35679
A substance used to treat hyperlipidemia (an excess of lipids in the blood).
James Malone
http://www.ebi.ac.uk/efo/EFO_0001851
hypolipidemic agent
antilipemic drugs
antihyperlipemic
antilipemic drug
http://jaxmice.jax.org/strain/009265.html
ILSXISS23/TejJ
Tomasz Adamusiak
CL:0000499
A connective tissue cell of an organ found in the loose connective tissue. These are most often associated with the uterine mucosa and the ovary as well as the hematopoietic system and elsewhere.
A connective tissue cell of an organ found in the loose connective tissue. These are most often associated with the uterine mucosa and the ovary as well as the hematopoietic system and elsewhere.[accessedResource: CL:0000499][accessDate: 10-05-2010]
stromal cell
Tomasz Adamusiak
BHT101
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0002399
aluminium
aluminio
13Al
InChI=1/Al
Ele Holloway
aluminum
CHEBI:28984
InChIKey=XAGFODPZIPBFFR-UHFFFAOYAX
A boron group element atom that has formula Al.
aluminium atom
James Malone
[Al]
A boron group element that has formula Al.
true
Tomasz Adamusiak
malignant tumor
malignant neoplasia
James Malone
malignant tumour
cancer
ductal carcinoma in situ
NIFSTD:birnlex_406
A malignant neoplasm in which new abnormal tissue grow by excessive cellular division and proliferation more rapidly than normal and continues to grow after the stimuli that initiated the new growth cease.
BTO:0001226
PO:0009010
MAT:0000008
seed[accessedResource: BTO:0001226][accessDate: 10-05-2010]
GRO:0005339
James Malone
seed structure
ZEA:0015178
A matured ovule containing an embryo and food supply and covered by a seed coat.[accessedResource: BTO:0001226][accessDate: 10-05-2010]
seed
GRO:0005339[accessedResource: BTO:0001226][accessDate: 10-05-2010]
A matured ovule containing an embryo and food supply and covered by a seed coat.
MO_824
http://www.ebi.ac.uk/efo/EFO_0002014
An processed material which acquires images of fluorescence (induced with lasers) from labeled molecules on the surface of the microarray chip
array scanner
James Malone
tegument
XAO:0000176
MA:0000014
AAO:0000239
epithelial system - sensu C elegans[accessedResource: MAT:0000033][accessDate: 10-05-2010]
Something that covers or encloses; especially: an enveloping layer (as a skin, membrane, or husk) of an organism or one of its parts.
WBbt:0005730
FBbt:00004856
A division of the whole organism into specialized systems.[accessedResource: FBbt:00004856][accessDate: 10-05-2010]
EHDAA:6520
TADS:0000108
integument[accessedResource: BTO:0000634][accessDate: 10-05-2010]
Integumentary system
MAT:0000033
epithelial system - sensu C elegans
Something that covers or encloses; especially: an enveloping layer (as a skin, membrane, or husk) of an organism or one of its parts.[accessedResource: BTO:0000634][accessDate: 10-05-2010]
The taxon-independent term for the outer covering of an organism[accessedResource: MAT:0000033][accessDate: 10-05-2010]
dermal system[accessedResource: MAT:0000033][accessDate: 10-05-2010]
BTO:0000634
dermal system
FMAID:72979
integument
A division of the whole organism into specialized systems.
EMAPA:17524
tegument[accessedResource: BTO:0000634][accessDate: 10-05-2010]
EV:0100151
Integumentary system[accessedResource: FMAID:72979][accessDate: 10-05-2010]
The taxon-independent term for the outer covering of an organism
integumental system
James Malone
oropharynx
Oral part of pharynx
The part of the pharynx between the soft palate and the upper portion of the epiglottis.[accessedResource: NCIt:C12762][accessDate: 10-05-2010]
James Malone
NCIt:C12762
The part of the pharynx between the soft palate and the upper portion of the epiglottis.
Oral part of pharynx[accessedResource: FMA:54879][accessDate: 10-05-2010]
FMA:54879
http://www.arabidopsis.org/servlets/TairObject?id=1005158665&type=germplasm
CS57641 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158665&type=germplasm
CS57641
James Malone
GeneRIF:11741828
1.8
Muscular Dystrophies, Limb Girdle
limb girdle muscular dystrophy
Leyden-Möbius muscular dystrophy
GeneRIF:15351423
true
GeneRIF:15087111
GeneRIF:11891182
GeneRIF:12032588
GeneRIF:12499399
Leyden-Mobius muscular dystrophy
obsolete_calpainopathy
Leyden-Mbius muscular dystrophy[accessedResource: DOID:11724][accessDate: 10-05-2010]
GeneRIF:15385448
Leyden-Mbius muscular dystrophy
duplicate of limb-girdle muscular dystrophy EFO_0000758
Limb Girdle Muscular Dystrophy[accessedResource: MSH:D049288][accessDate: 10-05-2010]
Limb-girdle muscular dystrophy (disorder)[accessedResource: SNOMEDCT:93153005][accessDate: 10-05-2010]
SNOMEDCT:93153005
GeneRIF:14600260
James Malone
A heterogenous group of inherited muscular dystrophy that can be autosomal dominant or autosomal recessive. There are many forms (called LGMDs) involving genes encoding muscle membrane proteins such as the sarcoglycan (SARCOGLYCANS) complex that interacts with DYSTROPHIN. The disease is characterized by progressing wasting and weakness of the proximal muscles of arms and legs around the HIPS and SHOULDERS (the pelvic and shoulder girdles).[accessedResource: MSH:D049288][accessDate: 10-05-2010]
Leyden-Mobius muscular dystrophy[accessedResource: SNOMEDCT:93153005][accessDate: 10-05-2010]
GeneRIF:16344347
GeneRIF:14981167
MSH:D049288
DOID:11724
Limb-girdle muscular dystrophy (disorder)
GeneRIF:12428213
A heterogenous group of inherited muscular dystrophy that can be autosomal dominant or autosomal recessive. There are many forms (called LGMDs) involving genes encoding muscle membrane proteins such as the sarcoglycan (SARCOGLYCANS) complex that interacts with DYSTROPHIN. The disease is characterized by progressing wasting and weakness of the proximal muscles of arms and legs around the HIPS and SHOULDERS (the pelvic and shoulder girdles).
Leyden-Möbius muscular dystrophy[accessedResource: SNOMEDCT:93153005][accessDate: 10-05-2010]
GeneRIF:11822024
Limb-Girdle Muscular Dystrophies[accessedResource: MSH:D049288][accessDate: 10-05-2010]
limb-girdle muscular dystrophy type 2A
tamoxifenum
InChIKey=NKANXQFJJICGDU-QPLCGJKRBF
tamoxifeno
CC\\C(c1ccccc1)=C(/c1ccccc1)c1ccc(OCCN(C)C)cc1
Crisafeno
Apo-Tamox
tamoxifen
(Z)-2-(para-(1,2-Diphenyl-1-butenyl)phenoxy)-N,N-dimethylamine
1-para-beta-Dimethylaminoethoxyphenyl-trans-1,2-diphenylbut-1-ene
C26H29NO
http://www.ebi.ac.uk/efo/EFO_0001621
Diemon
A tertiary amine that has formula C26H29NO.
CHEBI:41774
trans-Tamoxifen
2-{4-[(1Z)-1,2-diphenylbut-1-en-1-yl]phenoxy}-N,N-dimethylethanamine
tamoxifene
InChI=1/C26H29NO/c1-4-25(21-11-7-5-8-12-21)26(22-13-9-6-10-14-22)23-15-17-24(18-16-23)28-20-19-27(2)3/h5-18H,4,19-20H2,1-3H3/b26-25-
(Z)-2-(4-(1,2-Diphenyl-1-butenyl)phenoxy)-N,N-dimethylethanamine
James Malone
1-p-beta-Dimethylaminoethoxyphenyl-trans-1,2-diphenylbut-1-ene
Jie Zheng
Tomasz Adamusiak
The part of organism's anatomy or substance arising from an organism from which the biomaterial was derived, excludes cells. E.g. tissue, organ, system, sperm, blood or body location (arm).
James Malone
true
tissue, organ, system, sperm, blood or body location (arm).
MO_954
organism part
James Malone
SUM225CWN
BTO:0001784
Peyer's gland[accessedResource: BTO:0001784][accessDate: 10-05-2010]
Peyer's gland
Any of numerous large oval patches of closely aggregated nodules of lymphoid tissue in the walls of the small intestine esp. in the ileum that partially or entirely disappear in advanced life and in typhoid fever become the seat of ulcers which may perforate the intestines.
Peyer's patch
Any of numerous large oval patches of closely aggregated nodules of lymphoid tissue in the walls of the small intestine esp. in the ileum that partially or entirely disappear in advanced life and in typhoid fever become the seat of ulcers which may perforate the intestines.[accessedResource: BTO:0001784][accessDate: 10-05-2010]
James Malone
NCIt:C22562
Peyers Patch (MMHCC)
GM12248
James Malone
FBbt:00005055
EV:0100056
FMAID:7152
EMAPA:16246
MAT:0000018
The organ system involved in the absorption of nutrients.
digestive system
digestive system component
James Malone
digestive system[accessedResource: MAT:0000018][accessDate: 10-05-2010]
TAO:0000339
MFO:0002980
ZFA:0000339
XAO:0000125
alimentary system
gastrointestinal system
TADS:0000170
EHDAA:514
gastrointestinal system[accessedResource: MAT:0000018][accessDate: 10-05-2010]
The organ system involved in the absorption of nutrients.[accessedResource: FBbt:00005055][accessDate: 10-05-2010]
AAO:0000129
SAEL:28
MA:0000323
Alimentary system[accessedResource: FMAID:7152][accessDate: 10-05-2010]
WBbt:0005748
by a caterpillar on a plant leaf
A measurement of physical damage, e.g. by a caterpillar on a plant leaf
damage intensity
James Malone
ML2
James Malone
Ele Holloway
NIFSTD:birnlex_160
rat
Mammals, Rats
http://www.ebi.ac.uk/efo/EFO_0001995
Rattus
Tomasz Adamusiak
CH2O
formaldehyde
The simplest aldehyde.
Formaldehyd
Methanal
Oxomethylene
Formalin
http://www.ebi.ac.uk/efo/EFO_0001538
CHEBI:16842
InChIKey=WSFSSNUMVMOOMR-UHFFFAOYAT
InChI=1/CH2O/c1-2/h1H2
An aldehyde that has formula CH2O.
Methylene oxide
[H]C([H])=O
Oxomethane
true
ppb
A dimensionless concentration notation which denotes the amount of a given substance in a total amount of 1,000,000,000 regardless of the units of measure as long as they are the same or 1 part in 10^[9].
parts per billion
MO_553
RNA stability design
Tomasz Adamusiak
NIFSTD:sao2254405550
population
Tomasz Adamusiak
true
http://www.ebi.ac.uk/efo/EFO_0000664
James Malone
A population is a material entity consisting of individuals which share a particular characteristic such as inhabiting a particular region or area or ability to interbreed.
A collection of independent organismal entities engaged in some form of spatio-temporal interaction or aggregate behavior
A collection of independent organismal entities engaged in some form of spatio-temporal interaction or aggregate behavior[accessedResource: NIFSTD:sao2254405550][accessDate: 10-05-2010]
a population is a collection of individuals from the same taxonomic class living, counted or sampled at a particular site or in a particular area
Endometriosis (clinical)[accessedResource: SNOMEDCT:129103003][accessDate: 10-05-2010]
GeneRIF:12042273
GeneRIF:12832381
GeneRIF:14556808
GeneRIF:11870103
GeneRIF:11883743
SNOMEDCT:396224008
GeneRIF:15242994
GeneRIF:15640252
GeneRIF:15861041
Endometriosis, site unspecified
GeneRIF:15746194
GeneRIF:12012624
GeneRIF:12009356
GeneRIF:15212674
GeneRIF:15705625
GeneRIF:12517591
GeneRIF:14980314
GeneRIF:14644829
GeneRIF:12062821
GeneRIF:15120697
GeneRIF:16084889
GeneRIF:12594002
GeneRIF:15212671
GeneRIF:15950672
GeneRIF:14989983
SNOMEDCT:198259004
Endometriosis NOS (disorder)
Endometriosis (disorder)
GeneRIF:12837926
ENDOMETRIOSIS NEC[accessedResource: ICD9:617.8][accessDate: 10-05-2010]
Endometriosis of other specified sites
Endometriosis NOS[accessedResource: SNOMEDCT:198259004][accessDate: 10-05-2010]
Endometriosis of other specified sites[accessedResource: ICD9:617.8][accessDate: 10-05-2010]
GeneRIF:15764806
GeneRIF:12571184
SNOMEDCT:129103003
GeneRIF:15083380
GeneRIF:14506926
GeneRIF:14645176
GeneRIF:14764801
GeneRIF:15193490
Endometriosis NOS
GeneRIF:12200463
GeneRIF:12372468
GeneRIF:16098858
Endometriosis, site unspecified[accessedResource: ICD9:617.9][accessDate: 10-05-2010]
GeneRIF:16144297
GeneRIF:15613411
GeneRIF:12372460
Endometriosis NOS (disorder)[accessedResource: SNOMEDCT:198259004][accessDate: 10-05-2010]
GeneRIF:15820792
GeneRIF:15665016
GeneRIF:15166131
GeneRIF:12587534
GeneRIF:15749523
GeneRIF:15319381
GeneRIF:15879464
ICD9:617.8
GeneRIF:11716965
GeneRIF:11925378
GeneRIF:16024248
GeneRIF:12699881
GeneRIF:15589849
GeneRIF:15588473
GeneRIF:15618253
DOID:289
Endometriosis (disorder)[accessedResource: SNOMEDCT:129103003][accessDate: 10-05-2010]
GeneRIF:15059587
GeneRIF:15602080
The growth of functional endometrial tissue in anatomic sites outside the uterine body. It most often occurs in the pelvic organs.[accessedResource: NCIt:C3014][accessDate: 10-05-2010]
Endometriosis (morphologic abnormality)[accessedResource: SNOMEDCT:396224008][accessDate: 10-05-2010]
GeneRIF:15866595
GeneRIF:15533352
GeneRIF:12620489
NCIt:C3014
GeneRIF:12571183
Endometriosis (morphologic abnormality)
GeneRIF:12525458
GeneRIF:15531592
GeneRIF:14505259
James Malone
GeneRIF:15236995
GeneRIF:12034345
GeneRIF:11756572
GeneRIF:12788899
GeneRIF:12700072
endometriosis
GeneRIF:16192641
GeneRIF:12568865
GeneRIF:11994543
GeneRIF:11968047
ICD9:617
GeneRIF:12372466
The growth of functional endometrial tissue in anatomic sites outside the uterine body. It most often occurs in the pelvic organs.
GeneRIF:12372458
ENDOMETRIOSIS NEC
GeneRIF:12529420
GeneRIF:15820794
GeneRIF:15749482
GeneRIF:16084898
GeneRIF:15166129
GeneRIF:12297480
GeneRIF:14967364
GeneRIF:14667896
GeneRIF:15878920
GeneRIF:11963839
GeneRIF:14998974
GeneRIF:15755869
GeneRIF:14667898
GeneRIF:15120698
GeneRIF:15044605
ICD9:617.9
GeneRIF:16210018
GeneRIF:11804955
GeneRIF:15105396
Endometriosis (clinical)
GeneRIF:15979997
GeneRIF:15979990
GeneRIF:16006475
GeneRIF:15302278
GeneRIF:12773447
GeneRIF:16169423
GeneRIF:15126568
GeneRIF:15734764
GeneRIF:15472211
GeneRIF:12112590
ethyl 2-(4-chlorophenoxy)-2-methylpropanoate
A propanoate ester that has formula C12H15ClO3.
Ethyl 2-(p-chlorophenoxy)isobutyrate
InChIKey=KNHUKKLJHYUCFP-UHFFFAOYAE
Lipofacton
2-(p-Chlorophenoxy)-2-methylpropionic acid ethyl ester
Ethyl chlorophenoxyisobutyrate
clofibrato
CHEBI:3750
InChI=1/C12H15ClO3/c1-4-15-11(14)12(2,3)16-10-7-5-9(13)6-8-10/h5-8H,4H2,1-3H3
C12H15ClO3
alpha-p-Chlorophenoxyisobutyryl ethyl ester
EPIB
clofibrate
Liprin
ELPI
alpha-(p-Chlorophenoxy)isobutyric acid, ethyl ester
http://www.ebi.ac.uk/efo/EFO_0001508
Ethyl clofibrate
clofibratum
CCOC(=O)C(C)(C)Oc1ccc(Cl)cc1
Atromid-S
2-(4-Chlorophenoxy)-2-methylpropanoic acid ethyl ester
CL:0000015
testis - germ cell
male germ cell
James Malone
Duchenne-Type Progressive Muscular Dystrophy[accessedResource: MSH:D020388][accessDate: 10-05-2010]
Dystrophy, Becker Muscular[accessedResource: MSH:D020388][accessDate: 10-05-2010]
Duchenne musc. dyst.
Pseudohypertrophic Muscular Dystrophies[accessedResource: MSH:D020388][accessDate: 10-05-2010]
GeneRIF:12031623
Muscular Dystrophy, Becker
GeneRIF:12619170
GeneRIF:11922612
DOID:11723
An X-linked recessive muscle disease caused by an inability to synthesize DYSTROPHIN, which is involved with maintaining the integrity of the sarcolemma. Muscle fibers undergo a process that features degeneration and regeneration. Clinical manifestations include proximal weakness in the first few years of life, pseudohypertrophy, cardiomyopathy (see MYOCARDIAL DISEASES), and an increased incidence of impaired mentation. Becker muscular dystrophy is a closely related condition featuring a later onset of disease (usually adolescence) and a slowly progressive course. (Adams et al., Principles of Neurology, 6th ed, p1415)
Pseudohypertrophic Muscular Dystrophy
An X-linked recessive muscle disease caused by an inability to synthesize DYSTROPHIN, which is involved with maintaining the integrity of the sarcolemma. Muscle fibers undergo a process that features degeneration and regeneration. Clinical manifestations include proximal weakness in the first few years of life, pseudohypertrophy, cardiomyopathy (see MYOCARDIAL DISEASES), and an increased incidence of impaired mentation. Becker muscular dystrophy is a closely related condition featuring a later onset of disease (usually adolescence) and a slowly progressive course. (Adams et al., Principles of Neurology, 6th ed, p1415)[accessedResource: MSH:D020388][accessDate: 10-05-2010]
GeneRIF:12609501
SNOMEDCT:76670001
GeneRIF:11968010
Duchenne musc. dyst.[accessedResource: DOID:11723][accessDate: 10-05-2010]
DMD - Duchenne muscular dystrophy
James Malone
GeneRIF:14511675
DMD - Duchenne muscular dystrophy[accessedResource: SNOMEDCT:76670001][accessDate: 10-05-2010]
GeneRIF:12920092
GeneRIF:12754415
GeneRIF:16295426
GeneRIF:15111323
GeneRIF:12798793
GeneRIF:12206800
GeneRIF:15328150
Pseudohypertrophic Muscular Dystrophy, Childhood[accessedResource: MSH:D020388][accessDate: 10-05-2010]
GeneRIF:12387876
Duchenne muscular dystrophy (disorder)[accessedResource: DOID:11723][accessDate: 10-05-2010]
GeneRIF:15616792
Pseudohypertrophic Muscular Dystrophy[accessedResource: MSH:D020388][accessDate: 10-05-2010]
MSH:D020388
GeneRIF:12754707
GeneRIF:14652441
Duchenne muscular dystrophy
GeneRIF:14631123
GeneRIF:12459784
Childhood Pseudohypertrophic Muscular Dystrophy
Duchenne-Type Progressive Muscular Dystrophy
Duchenne muscular dystrophy (disorder)
Dystrophies, Pseudohypertrophic Muscular
ES derived NSC
neural stem cells experimentally derived from ES cells
embryonic stem cell derived neuronal stem cell
diaphragm
James Malone
EV:0100376
future diaphragm
FMAID:13295
diaphragm muscle
BTO:0000341
Thoracic diaphragm
The thin muscle below the lungs and heart that separates the chest from the abdomen.
Thoracic diaphragm[accessedResource: FMAID:13295][accessDate: 10-05-2010]
EMAPA:17701
EHDAA:4104
MAT:0000502
diaphragm muscle[accessedResource: BTO:0000341][accessDate: 10-05-2010]
The thin muscle below the lungs and heart that separates the chest from the abdomen.[accessedResource: BTO:0000341][accessDate: 10-05-2010]
future diaphragm[accessedResource: MAT:0000502][accessDate: 10-05-2010]
CC(=C)[C@H]1CN[C@@H]([C@H]1CC(O)=O)C(O)=O
CHEBI:31746
A pyrrolidinemonocarboxylic acid that has formula C10H15NO4.
acidum kainicum
Digenin
Digensaeure
(2S-(2alpha,3beta,4beta))-2-carboxy-4-(1-methylethenyl)-3-pyrrolidineacetic acid
kainic acid
acido kainico
InChI=1/C10H15NO4/c1-5(2)7-4-11-9(10(14)15)6(7)3-8(12)13/h6-7,9,11H,1,3-4H2,2H3,(H,12,13)(H,14,15)/t6-,7+,9-/m0/s1/f/h12,14H
alpha-Kainic acid
Kainsaeure
digenic acid
acide kainique
InChIKey=VLSMHEGGTFMBBZ-WODSAOQMDB
James Malone
Helminal
http://www.ebi.ac.uk/efo/EFO_0001561
L-alpha-kainic acid
(3S,4R)-3-(carboxymethyl)-4-(prop-1-en-2-yl)-L-proline
DBTRG05MG
DBTRG05MG
James Malone
DBTRG-05MG
NCIH1651
James Malone
Ele Holloway
BL41K3
James Malone
SNOMEDCT:427608000
Left ventricular noncompaction (disorder)
Left ventricular noncompaction (disorder)[accessedResource: SNOMEDCT:427608000][accessDate: 10-05-2010]
left ventricular noncompaction
Tomasz Adamusiak
(3beta,5alpha,22beta,25S)-spirosolan-3-yl O-beta-D-glucopyranosyl-(1->2)-O-(beta-D-xylopyranosyl)-(1->3)-O-beta-D-glucopyranosyl-(1->4)-beta-D-galactopyranoside
CHEBI:9630
http://www.ebi.ac.uk/efo/EFO_0001628
A spirostanyl glycoside that has formula C50H83NO21.
InChIKey=REJLGAUYTKNVJM-SGXCCWNXBK
tomatine
lycopersicin
InChI=1/C50H83NO21/c1-20-7-12-50(51-15-20)21(2)32-28(72-50)14-26-24-6-5-22-13-23(8-10-48(22,3)25(24)9-11-49(26,32)4)65-45-40(63)37(60)41(31(18-54)68-45)69-47-43(71-46-39(62)36(59)34(57)29(16-52)66-46)42(35(58)30(17-53)67-47)70-44-38(61)33(56)27(55)19-64-44/h20-47,51-63H,5-19H2,1-4H3/t20-,21-,22-,23-,24+,25-,26-,27+,28-,29+,30+,31+,32-,33-,34+,35+,36-,37+,38+,39+,40+,41-,42-,43+,44-,45+,46-,47-,48-,49-,50-/m0/s1
A''-Tomatidine
C50H83NO21
James Malone
alpha-tomatine
[H][C@@]12CC[C@]3([H])[C@]([H])(CC[C@@]4(C)[C@@]3([H])C[C@]3([H])O[C@@]5(CC[C@H](C)CN5)[C@@H](C)[C@]43[H])[C@@]1(C)CC[C@@H](C2)O[C@@H]1O[C@H](CO)[C@H](O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O[C@@H]3OC[C@@H](O)[C@H](O)[C@H]3O)[C@H]2O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O
(22S,25S)-5alpha-spirosolan-3beta-yl beta-D-glucopyranosyl-(1->2)-[beta-D-xylopyranosyl-(1->3)]-beta-D-glucopyranosyl-(1->4)-beta-D-galactopyranoside
https://www.cbil.upenn.edu/RADQuerier/php/sampleInfo.php?assay_id=10939&&study_id=3144
http://www.criver.com/fr-FR/ProdServ/ByType/ResModOver/ResMod/Pages/NOD_SCID_mouse_J.aspx
Nonobese diabetic (NOD) mouse strain which is homozygous for the scid mutation.
NOD.scid
Tomasz Adamusiak
Jie Zheng
http://www.arabidopsis.org/servlets/TairObject?id=1005158634&type=germplasm
CS57610 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158634&type=germplasm
CS57610
James Malone
HCC
Carcinoma of Liver Cells
A malignant tumor that arises from hepatocytes. Hepatocellular carcinoma is relatively rare in the United States but very common in all African countries south of the Sahara and in Southeast Asia. Most cases are seen in patients over the age of 50 years, but this tumor can also occur in younger individuals and even in children. Hepatocellular carcinoma is more common in males than females and is associated with hepatitis B, hepatitis C, chronic alcohol abuse and cirrhosis. Serum elevation of alpha-fetoprotein occurs in a large percentage of patients with hepatocellular carcinoma. Grossly, hepatocellular carcinoma may present as a single mass, as multiple nodules, or as diffuse liver involvement. Microscopically, there is a wide range of differentiation from tumor to tumor (well differentiated to poorly differentiated tumors). Hepatocellular carcinomas quickly metastasize to regional lymph nodes and lung. The overall median survival of untreated liver cell carcinoma is about 4 months. The most effective treatment of hepatocellular carcinoma is complete resection of the tumor. Lately, an increasing number of tumors have been treated with liver transplantation.
A malignant tumor that arises from hepatocytes. Hepatocellular carcinoma is relatively rare in the United States but very common in all African countries south of the Sahara and in Southeast Asia. Most cases are seen in patients over the age of 50 years, but this tumor can also occur in younger individuals and even in children. Hepatocellular carcinoma is more common in males than females and is associated with hepatitis B, hepatitis C, chronic alcohol abuse and cirrhosis. Serum elevation of alpha-fetoprotein occurs in a large percentage of patients with hepatocellular carcinoma. Grossly, hepatocellular carcinoma may present as a single mass, as multiple nodules, or as diffuse liver involvement. Microscopically, there is a wide range of differentiation from tumor to tumor (well differentiated to poorly differentiated tumors). Hepatocellular carcinomas quickly metastasize to regional lymph nodes and lung. The overall median survival of untreated liver cell carcinoma is about 4 months. The most effective treatment of hepatocellular carcinoma is complete resection of the tumor. Lately, an increasing number of tumors have been treated with liver transplantation. --2002
HCC[accessedResource: NCIt:C3099][accessDate: 10-05-2010]
hepatocellular carcinoma
Liver Cell Carcinoma
Carcinoma of the Liver Cells
Liver Cell Carcinoma[accessedResource: NCIt:C3099][accessDate: 10-05-2010]
NCIt:C3099
Primary Carcinoma of the Liver Cells[accessedResource: NCIt:C3099][accessDate: 10-05-2010]
Carcinoma of Liver Cells[accessedResource: NCIt:C3099][accessDate: 10-05-2010]
A malignant tumor that arises from hepatocytes. Hepatocellular carcinoma is relatively rare in the United States but very common in all African countries south of the Sahara and in Southeast Asia. Most cases are seen in patients over the age of 50 years, but this tumor can also occur in younger individuals and even in children. Hepatocellular carcinoma is more common in males than females and is associated with hepatitis B, hepatitis C, chronic alcohol abuse and cirrhosis. Serum elevation of alpha-fetoprotein occurs in a large percentage of patients with hepatocellular carcinoma. Grossly, hepatocellular carcinoma may present as a single mass, as multiple nodules, or as diffuse liver involvement. Microscopically, there is a wide range of differentiation from tumor to tumor (well differentiated to poorly differentiated tumors). Hepatocellular carcinomas quickly metastasize to regional lymph nodes and lung. The overall median survival of untreated liver cell carcinoma is about 4 months. The most effective treatment of hepatocellular carcinoma is complete resection of the tumor. Lately, an increasing number of tumors have been treated with liver transplantation.[accessedResource: NCIt:C3099][accessDate: 10-05-2010]
Primary Carcinoma of the Liver Cells
hepatoma
James Malone
Hepatoma[accessedResource: NCIt:C3099][accessDate: 10-05-2010]
Primary Carcinoma of Liver Cells
Carcinoma of the Liver Cells[accessedResource: NCIt:C3099][accessDate: 10-05-2010]
Primary Carcinoma of Liver Cells[accessedResource: NCIt:C3099][accessDate: 10-05-2010]
SW480
James Malone
Ele Holloway
PO:0009029
BTO:0001559
The floral organ that produces pollen; consisting of an anther and filament.[accessedResource: BTO:0001559][accessDate: 10-05-2010]
ZEA:0015134
MAT:0000515
GRO:0005583
James Malone
stamen
The floral organ that produces pollen; consisting of an anther and filament.
GRO:0005583[accessedResource: BTO:0001559][accessDate: 10-05-2010]
embryonic day 11.5
Tomasz Adamusiak
Jie Zheng
InChI=1/C24H38O4/c1-5-9-13-19(7-3)17-27-23(25)21-15-11-12-16-22(21)24(26)28-18-20(8-4)14-10-6-2/h11-12,15-16,19-20H,5-10,13-14,17-18H2,1-4H3
Di-sec-octyl phthalate
DEHP
C24H38O4
A phthalate ester that has formula C24H38O4.
Dioctyl phthalate
diethylhexyl phthalate
CHEBI:17747
CCCCC(CC)COC(=O)c1ccccc1C(=O)OCC(CC)CCCC
bis(2-ethylhexyl) phthalate
InChIKey=BJQHLKABXJIVAM-UHFFFAOYAB
http://www.ebi.ac.uk/efo/EFO_0001521
Di(2-ethylhexyl)phthalate
CRL-2266
SH-SY5Y
James Malone
Ele Holloway
ZFS:0000032
pharyngula high-pec
James Malone
MA:0002716
zeugopod
middle part of limb[accessedResource: MAT:0000092][accessDate: 10-05-2010]
MAT:0000092
James Malone
The middle part of the limb (e.g. between the elbow and wrist)
middle part of limb
The middle part of the limb (e.g. between the elbow and wrist)[accessedResource: MAT:0000092][accessDate: 10-05-2010]
MO_183
A role that a material entity can play which enables particular conditions used to grow organisms or parts of the organism. This includes isolated environments such as cultures and open environments such as field studies.
growth condition
Tomasz Adamusiak
Jie Zheng
James Malone
A thin formative layer between the xylem and phloem of most vascular plants that gives rise to new cells and is responsible for secondary growth;nA lateral meristem in vascular plants, including the vascular cambium and cork cambium, that forms parallel rows of cells resulting in secondary tissues.
PO:0005597
cambium
James Malone
The layer of active cells between xylem and phloem that gives rise to secondary tissues (e.g. bark)[accessedResource: MAT:0000223][accessDate: 10-05-2010]
The layer of active cells between xylem and phloem that gives rise to secondary tissues (e.g. bark)
MAT:0000223
GRO:0005597[accessedResource: BTO:0000170][accessDate: 10-05-2010]
A thin formative layer between the xylem and phloem of most vascular plants that gives rise to new cells and is responsible for secondary growth;nA lateral meristem in vascular plants, including the vascular cambium and cork cambium, that forms parallel rows of cells resulting in secondary tissues.[accessedResource: BTO:0000170][accessDate: 10-05-2010]
GRO:0005597
BTO:0000170
goat
http://www.ebi.ac.uk/efo/EFO_0002637
Capra hircus
James Malone
GeneRIF:12217886
An autosomal dominant inherited form of amyloidosis.[accessedResource: NCIt:C34373][accessDate: 10-05-2010]
GeneRIF:12875980
motor neuron disease, bulbar[accessedResource: DOID:332][accessDate: 10-05-2010]
GeneRIF:14675609
Lou Gehrig Disease[accessedResource: MSH:D000690][accessDate: 10-05-2010]
GeneRIF:14642651
GeneRIF:15184633
GeneRIF:14985749
A degenerative disorder affecting upper MOTOR NEURONS in the brain and lower motor neurons in the brain stem and SPINAL CORD. Disease onset is usually after the age of 50 and the process is usually fatal within 3 to 6 years. Clinical manifestations include progressive weakness, atrophy, FASCICULATION, hyperreflexia, DYSARTHRIA, dysphagia, and eventual paralysis of respiratory function. Pathologic features include the replacement of motor neurons with fibrous ASTROCYTES and atrophy of anterior SPINAL NERVE ROOTS and corticospinal tracts (MeSH).[accessedResource: NIFSTD:birnlex_12566][accessDate: 10-05-2010]
GeneRIF:12502789
AMYOTROPHIC SCLEROSIS[accessedResource: ICD9:335.20][accessDate: 10-05-2010]
GeneRIF:15691826
GeneRIF:12730211
AMYOTROPHIC SCLEROSIS
GeneRIF:11860274
GeneRIF:11854285
GeneRIF:15978558
Gehrig Disease[accessedResource: MSH:D000690][accessDate: 10-05-2010]
GeneRIF:11675877
An autosomal dominant inherited form of amyloidosis.
GeneRIF:15910777
Lateral Scleroses, Amyotrophic[accessedResource: MSH:D000690][accessDate: 10-05-2010]
GeneRIF:15465081
ALS[accessedResource: DOID:332][accessDate: 10-05-2010]
NIFSTD:birnlex_12566
GeneRIF:15672551
Amyotrophic lateral sclerosis (disorder)
GeneRIF:15264227
GeneRIF:14511332
Lou Gehrig's disease
GeneRIF:15623718
GeneRIF:15076751
GeneRIF:14989597
Guam Form of Amyotrophic Lateral Sclerosis
Lateral Scleroses, Amyotrophic
GeneRIF:12437574
GeneRIF:15546588
amyotrophic lateral sclerosis
ICD9:335.20
Tomasz Adamusiak
GeneRIF:14991384
GeneRIF:14734542
GeneRIF:15037546
James Malone
A degenerative disorder affecting upper MOTOR NEURONS in the brain and lower motor neurons in the brain stem and SPINAL CORD. Disease onset is usually after the age of 50 and the process is usually fatal within 3 to 6 years. Clinical manifestations include progressive weakness, atrophy, FASCICULATION, hyperreflexia, DYSARTHRIA, dysphagia, and eventual paralysis of respiratory function. Pathologic features include the replacement of motor neurons with fibrous ASTROCYTES and atrophy of anterior SPINAL NERVE ROOTS and corticospinal tracts. (From Adams et al., Principles of Neurology, 6th ed, pp1089-94)[accessedResource: MSH:D000690][accessDate: 10-05-2010]
GeneRIF:14597108
GeneRIF:12694394
GeneRIF:12614934
GeneRIF:15106121
GeneRIF:12270696
GeneRIF:15652414
GeneRIF:15126567
GeneRIF:11991808
Guam Form of Amyotrophic Lateral Sclerosis[accessedResource: MSH:D000690][accessDate: 10-05-2010]
Disease, Lou-Gehrigs
GeneRIF:15475574
GeneRIF:12847526
Amyotrophic Lateral Sclerosis, Guam Form
GeneRIF:12230304
GeneRIF:15837590
GeneRIF:15388334
Gehrigs Disease
GeneRIF:12210393
GEHRIGS DIS
GeneRIF:15634772
GeneRIF:15657392
LOU GEHRIG DIS[accessedResource: MSH:D000690][accessDate: 10-05-2010]
GeneRIF:14970233
GeneRIF:15657798
ALS (Amyotrophic Lateral Sclerosis)[accessedResource: MSH:D000690][accessDate: 10-05-2010]
GeneRIF:15094483
GeneRIF:14978393
GeneRIF:15350647
GeneRIF:11943600
GEHRIGS DIS[accessedResource: MSH:D000690][accessDate: 10-05-2010]
GeneRIF:11996514
GeneRIF:12641746
GeneRIF:12235108
ALS (Amyotrophic Lateral Sclerosis)
GeneRIF:15313203
Amyotrophic lateral sclerosis (disorder)[accessedResource: DOID:332][accessDate: 10-05-2010]
GeneRIF:12679596
GeneRIF:13129803
GeneRIF:15488469
GeneRIF:15069187
Gehrig Disease
GeneRIF:12866199
DOID:332
GeneRIF:15006704
GeneRIF:14596848
GeneRIF:15568021
GeneRIF:12458194
GeneRIF:15789135
GeneRIF:11951178
A degenerative disorder affecting upper MOTOR NEURONS in the brain and lower motor neurons in the brain stem and SPINAL CORD. Disease onset is usually after the age of 50 and the process is usually fatal within 3 to 6 years. Clinical manifestations include progressive weakness, atrophy, FASCICULATION, hyperreflexia, DYSARTHRIA, dysphagia, and eventual paralysis of respiratory function. Pathologic features include the replacement of motor neurons with fibrous ASTROCYTES and atrophy of anterior SPINAL NERVE ROOTS and corticospinal tracts. (From Adams et al., Principles of Neurology, 6th ed, pp1089-94)
Motor Neuron Disease, Amyotrophic Lateral Sclerosis
GeneRIF:12441104
GeneRIF:15753080
GeneRIF:15109247
GeneRIF:12393885
GeneRIF:12870272
GeneRIF:15030390
LOU GEHRIGS DIS
GeneRIF:12770687
GeneRIF:15776280
GeneRIF:12972170
GeneRIF:15033789
Gehrigs Disease[accessedResource: MSH:D000690][accessDate: 10-05-2010]
GeneRIF:12843244
Lou Gehrig's Disease[accessedResource: NIFSTD:birnlex_12566][accessDate: 10-05-2010]
GeneRIF:15557516
Dementia With Amyotrophic Lateral Sclerosis
Lou-Gehrigs Disease[accessedResource: MSH:D000690][accessDate: 10-05-2010]
GeneRIF:12153483
GeneRIF:15330338
GeneRIF:12584731
GeneRIF:12644909
LOU GEHRIG DIS
GeneRIF:15829169
MOTOR NEURON DIS AMYOTROPHIC LATERAL SCLEROSIS
GeneRIF:12528821
GeneRIF:15233913
GeneRIF:16020530
GeneRIF:14676054
GeneRIF:12442272
GeneRIF:15048885
Amyotrophic Lateral Sclerosis, Guam Form[accessedResource: MSH:D000690][accessDate: 10-05-2010]
GeneRIF:16005901
GeneRIF:15509539
GeneRIF:12039658
Dementia With Amyotrophic Lateral Sclerosis[accessedResource: MSH:D000690][accessDate: 10-05-2010]
GeneRIF:12659845
Lou Gehrig Disease
GeneRIF:12138710
GeneRIF:12915461
GeneRIF:13678668
SNOMEDCT:86044005
GeneRIF:12475980
GeneRIF:12446576
GeneRIF:15326253
MSH:D000690
GeneRIF:11854284
GeneRIF:12707786
Motor neuron disease, bulbar
GeneRIF:12125045
NCIt:C34373
ALS
GeneRIF:15019581
Motor Neuron Disease, Amyotrophic Lateral Sclerosis[accessedResource: MSH:D000690][accessDate: 10-05-2010]
GeneRIF:14506936
GeneRIF:12677446
MOTOR NEURON DIS AMYOTROPHIC LATERAL SCLEROSIS[accessedResource: MSH:D000690][accessDate: 10-05-2010]
A degenerative disorder affecting upper MOTOR NEURONS in the brain and lower motor neurons in the brain stem and SPINAL CORD. Disease onset is usually after the age of 50 and the process is usually fatal within 3 to 6 years. Clinical manifestations include progressive weakness, atrophy, FASCICULATION, hyperreflexia, DYSARTHRIA, dysphagia, and eventual paralysis of respiratory function. Pathologic features include the replacement of motor neurons with fibrous ASTROCYTES and atrophy of anterior SPINAL NERVE ROOTS and corticospinal tracts (MeSH).
GeneRIF:16114275
LOU GEHRIGS DIS[accessedResource: MSH:D000690][accessDate: 10-05-2010]
GeneRIF:12127151
GeneRIF:12448348
GeneRIF:12783432
GeneRIF:12480087
T84
James Malone
Ele Holloway
true
obsolete_CTL sensitivity
BT474
James Malone
true
ug/kg
microgram per kilogram
C7H6O3
o-carboxyphenol
A hydroxybenzoic acid that has formula C7H6O3.
OC(=O)c1ccccc1O
James Malone
http://www.ebi.ac.uk/efo/EFO_0001608
salicylic acid
2-hydroxybenzoic acid
InChIKey=YGSDEFSMJLZEOE-BGGKNDAXCM
CHEBI:16914
ortho-Hydroxylated benzoic acid.
2-carboxyphenol
o-hydroxybenzoic acid
InChI=1/C7H6O3/c8-6-4-2-1-3-5(6)7(9)10/h1-4,8H,(H,9,10)/f/h9H
http://www.ebi.ac.uk/efo/EFO_0001896
CHEBI:50750
An inhibitor of DNA topoisomerase II, which catalyses ATP-dependent breakage of both strands of DNA, passage of the unbroken strands through the breaks, and rejoining of the broken strands.
topoisomerase II inhibitor
James Malone
MDAMB468
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158688&type=germplasm
CS57664 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158688&type=germplasm
CS57664
James Malone
Cocaine dependence, unspecified use[accessedResource: DOID:9975][accessDate: 10-05-2010]
Mental and behavioral disorder due to use of cocaine: dependence syndrome (disorder)
Cocaine dependence (disorder)
Cocaine dependence, unspecified (disorder)
Cocaine drug dependence NOS (disorder)[accessedResource: DOID:9975][accessDate: 10-05-2010]
Cocaine drug dependence NOS (disorder)
DOID:9975
Cocaine dependence, unspecified use
Cocaine dependence
cocaine addiction
Ele Holloway
Tomasz Adamusiak
Cocaine dependence, unspecified (disorder)[accessedResource: DOID:9975][accessDate: 10-05-2010]
Cocaine dependence (disorder)[accessedResource: DOID:9975][accessDate: 10-05-2010]
Cocaine Dependence[accessedResource: DOID:9975][accessDate: 10-05-2010]
Mental and behavioral disorder due to use of cocaine: dependence syndrome (disorder)[accessedResource: DOID:9975][accessDate: 10-05-2010]
MO_721
true
A femtoliter is a volume unit which is equal to 10^-15 L.
Tomasz Adamusiak
Jie Zheng
fl
femtoliter
James Malone
A volume unit which is equal to 10^[-12] L.
plant sperm
James Malone
sperm cell
sperm cell[accessedResource: MAT:0000218][accessDate: 10-05-2010]
sperm[accessedResource: MAT:0000218][accessDate: 10-05-2010]
sperm
OntologyMappingImporter following MAT:0000218
MAT:0000218
PO:0000084
FMA:72206
Thymus medulla
Thymus medulla[accessedResource: FMA:72206][accessDate: 10-05-2010]
medulla of thymus
James Malone
Striate Body[accessedResource: NCIt:C12448][accessDate: 10-05-2010]
Either of a pair of masses of nervous tissue within the brain that contain two large nuclei of gray matter separated by sheets of white matter.[accessedResource: BTO:0001311][accessDate: 10-05-2010]
NIFSTD:birnlex_1672
corpus striatum
James Malone
Striped gray and white matter consisting of the neostriatum and paleostriatum (globus pallidus). It is located in front of and lateral to the thalamus in each cerebral hemisphere. The gray substance is made up of the caudate nucleus and the lentiform nucleus. The white matter is the internal capsule. (MeSH)
Striped gray and white matter consisting of the neostriatum and paleostriatum (globus pallidus). It is located in front of and lateral to the thalamus in each cerebral hemisphere. The gray substance is made up of the caudate nucleus and the lentiform nucleus. The white matter is the internal capsule. (MeSH)[accessedResource: NCIt:C12448][accessDate: 10-05-2010]
Neostriatum[accessedResource: NIFSTD:birnlex_1672][accessDate: 10-05-2010]
Neostriatum
Striate Body
dorsal striatum
Either of a pair of masses of nervous tissue within the brain that contain two large nuclei of gray matter separated by sheets of white matter.
NCIt:C12448
BTO:0001311
striatum[accessedResource: BTO:0001311][accessDate: 10-05-2010]
Striatum
NIFSTD:nlx_anat_20090201
Tomasz Adamusiak
An attomole is a substance unit equal to 10^-18 mol.
MO_977
Tomasz Adamusiak
A substance unit equal to 10^[-18] mol.
http://www.ebi.ac.uk/efo/EFO_0001793
James Malone
attomole
amol
Jie Zheng
true
CHEBI:27300
http://www.ebi.ac.uk/efo/EFO_0001636
Vitamin D is a group of fat-soluble prohormones, which can be obtained from sun exposure, food and supplements. Vitamin D is biologically inactive and converted to the biologically active calcicitriol via double hydroxilation in the body.
Vitamin D3
Not needed.
true
The recorded value of the outcome of some test.
obsolete_test result
James Malone
C57BL/6 is a mouse strain as described in Jackson Laboratory http://www.informatics.jax.org/external/festing/mouse/docs/C57BL.shtml
obsolete_C57BL/6
duplicate of EFO_0000606
NIFSTD:birnlex_398
2.5
Tomasz Adamusiak
true
http://www.informatics.jax.org/external/festing/mouse/docs/C57BL.shtml
YCC1
James Malone
Ele Holloway
Ele Holloway
Human colon carcinoma cell line; established from the primary colon carcinoma of an adult man.
Human colon carcinoma cell line; established from the primary colon carcinoma of an adult man.[accessedResource: BTO:0002254][accessDate: 10-05-2010]
HCT-116 cell[accessedResource: BTO:0002254][accessDate: 10-05-2010]
BTO:0002254
HCT116
HCT-116 cell
HCT116 cell[accessedResource: BTO:0002254][accessDate: 10-05-2010]
James Malone
HCT116 cell
Dominantly-Inherited Spinocerebellar Ataxia[accessedResource: NIFSTD:birnlex_12648][accessDate: 10-05-2010]
Spinocerebellar Ataxias
Spinocerebellar ataxia (disorder)[accessedResource: DOID:1441][accessDate: 10-05-2010]
A group of dominantly inherited, predominatly late-onset, cerebellar ataxias which have been divided into multiple subtypes based on clinical features and genetic mapping. Progressive ataxia is a central feature of these conditions, and in certain subtypes POLYNEUROPATHY; DYSARTHRIA; visual loss; and other disorders may develop (MeSH).
Ele Holloway
Spinocerebellar Atrophy[accessedResource: NIFSTD:birnlex_12648][accessDate: 10-05-2010]
Spinocerebellar Atrophy
Spinocerebellar ataxia (disorder)
Dominantly-Inherited Spinocerebellar Ataxia
Tomasz Adamusiak
A group of dominantly inherited, predominatly late-onset, cerebellar ataxias which have been divided into multiple subtypes based on clinical features and genetic mapping. Progressive ataxia is a central feature of these conditions, and in certain subtypes POLYNEUROPATHY; DYSARTHRIA; visual loss; and other disorders may develop (MeSH).[accessedResource: NIFSTD:birnlex_12648][accessDate: 10-05-2010]
NIFSTD:birnlex_12648
Spinocerebellar Ataxias[accessedResource: DOID:1441][accessDate: 10-05-2010]
DOID:1441
spinocerebellar ataxia
http://www.arabidopsis.org/servlets/TairObject?id=1005158642&type=germplasm
CS57618 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158642&type=germplasm
CS57618
James Malone
Capan-1
Capan1
James Malone
Ele Holloway
Pneumococcal infectious disease
Infections with bacteria of the species STREPTOCOCCUS PNEUMONIAE.[accessedResource: MSH:D011008][accessDate: 10-05-2010]
Pneumococcal infectious disease[accessedResource: SNOMEDCT:16814004][accessDate: 10-05-2010]
INFECT STREP PNEUMONIAE
pneumoniae Infections, Streptococcus[accessedResource: MSH:D011008][accessDate: 10-05-2010]
DOID:9805
James Malone
PNEUMOCOCCAL INFECT[accessedResource: MSH:D011008][accessDate: 10-05-2010]
Infections, Pneumococcal[accessedResource: MSH:D011008][accessDate: 10-05-2010]
Infections with bacteria of the species STREPTOCOCCUS PNEUMONIAE.
Pneumococcal infectious disease, NOS[accessedResource: SNOMEDCT:16814004][accessDate: 10-05-2010]
pneumoniae Infections, Streptococcus
INFECT PNEUMOCOCCAL
Pneumococcal infection, NOS[accessedResource: SNOMEDCT:16814004][accessDate: 10-05-2010]
INFECT STREP PNEUMONIAE[accessedResource: MSH:D011008][accessDate: 10-05-2010]
SNOMEDCT:16814004
Pneumococcal infectious disease, NOS
MSH:D011008
Pneumococcal infection, NOS
Pneumococcal infectious disease (disorder)
Streptococcus pneumoniae Infection[accessedResource: MSH:D011008][accessDate: 10-05-2010]
Infections, Pneumococcal
GeneRIF:12569171
pneumoniae Infection, Streptococcus
Pneumococcal infectious disease (disorder)[accessedResource: DOID:9805][accessDate: 10-05-2010]
pneumococcal infection
There is possible overlap here with sample and perhaps should be merged.
The physical site from which tissue has been removed from a living organism. Does not imply any statistical significance, i.e. that it is a statistically representative sample of the whole.
biopsy site
James Malone
CHEBI:51953
http://www.ebi.ac.uk/efo/EFO_0002008
polyamide
James Malone
MAT:0000483
A dorsal fin
A geometric modifier is an anatomical modifier which describes some quality about the geometric position of some organism part.
geometric modifier
James Malone
D10.G4.1
James Malone
Ele Holloway
CL:0000813
Tomasz Adamusiak
A distinctly differentiated long-lived T cell that has the phenotype CD45RO-positive and CD127-positive.[accessedResource: CL:0000813][accessDate: 10-05-2010]
A distinctly differentiated long-lived T cell that has the phenotype CD45RO-positive and CD127-positive.
BTO:0003435
memory T lymphocyte
A T-cell that bears receptors for a specific foreign antigen encountered during a prior infection or vaccination. After an infection or a vaccination, some of the T-cells that participated in the response remain as memory T-cells, which can rapidly mobilize and clone themselves should the same antigen be re-encountered during a second infection at a later time.
memory T-lymphocyte[accessedResource: CL:0000813][accessDate: 10-05-2010]
A T-cell that bears receptors for a specific foreign antigen encountered during a prior infection or vaccination. After an infection or a vaccination, some of the T-cells that participated in the response remain as memory T-cells, which can rapidly mobilize and clone themselves should the same antigen be re-encountered during a second infection at a later time.[accessedResource: BTO:0003435][accessDate: 10-05-2010]
memory T-cell
NCI Metathesaurus: C1017212
Hibiscus chlorotic ringspot virus
James Malone
line
MO_859
obsolete_strain
Jie Zheng
this class was originally 'strain or line'
1.8
A population or type of organisms that is geneticaly different from others of the same species and possessing a set of defined characteristics.
Tomasz Adamusiak
true
consolodated into organism hierarchy
James Malone
ZFS:0000027
segmentation 20-25 somites
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158651&type=germplasm
CS57627 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158651&type=germplasm
CS57627
James Malone
true
A base unit which is a standard measure of the amount of matter/energy of a physical object.
MO_11
mass unit
James Malone
Jie Zheng
A mass unit is a base unit which is a standard measure of the amount of matter/energy of a physical object.
http://www.ebi.ac.uk/efo/EFO_0001679
Tomasz Adamusiak
MO_149
antimetabolites
http://www.ebi.ac.uk/efo/EFO_0001834
CHEBI:35221
Substance, structurally similar to a metabolite, which competes with it or replaces it, and so prevents or reduces its normal utilization.
antimetabolite
James Malone
Bursa-Dependent Lymphocytes[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B Lymphocytes
true
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.
obsolete_B-lymphocyte
Bursa-Equivalent Lymphocyte[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B-Lymphocytes[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B Cells[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
CL:0000236
B cell[accessedResource: CL:0000236][accessDate: 10-05-2010]
Bursa-Dependent Lymphocytes
B lymphocyte[accessedResource: CL:0000236][accessDate: 10-05-2010]
B-Cell
Bursa-Equivalent Lymphocyte
NCIt:C12474
B Cells
Consolidated with B cell (EFO_0000101), use B cell class instead.
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.[accessedResource: CL:0000236][accessDate: 10-05-2010]
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.
B lymphocyte
Natriumpyruvat
InChI=1/C3H4O3.Na/c1-2(4)3(5)6;/h1H3,(H,5,6);/q;+1/p-1/fC3H3O3.Na/q-1;m
An organic sodium salt that has formula C3H3NaO3.
InChIKey=DAEPDZWVDSPTHF-UFJSCRFPCI
pyruvic acid, sodium salt
[Na+].CC(=O)C([O-])=O
sodium 2-oxopropanoate
http://www.ebi.ac.uk/efo/EFO_0001612
C3H3NaO3
sodium pyruvate
CHEBI:50144
U266B1
James Malone
Ele Holloway
James Malone
polymorphonuclear cell[accessedResource: BTO:0000751][accessDate: 10-05-2010]
PMN cell[accessedResource: BTO:0000751][accessDate: 10-05-2010]
PMN cell
immune cell[accessedResource: CL:0000738][accessDate: 10-05-2010]
leucocyte
Any of the blood cells that are colorless, lack hemoglobin, contain a nucleus, and include the lymphocytes, monocytes, neutrophils, eosinophils, and basophils.
leucocyte[accessedResource: CL:0000738][accessDate: 10-05-2010]
CL:0000738
A nucleated cell of the myeloid or lymphoid lineages, found in blood or other tissue.[accessedResource: CL:0000738][accessDate: 10-05-2010]
polymorphonuclear cell
white blood cell
white blood cell[accessedResource: CL:0000738][accessDate: 10-05-2010]
BTO:0000751
A nucleated cell of the myeloid or lymphoid lineages, found in blood or other tissue.
immune cell
leukocyte
Any of the blood cells that are colorless, lack hemoglobin, contain a nucleus, and include the lymphocytes, monocytes, neutrophils, eosinophils, and basophils.[accessedResource: BTO:0000751][accessDate: 10-05-2010]
MO_868
liquid_handling_instrument
http://www.ebi.ac.uk/efo/EFO_0002021
A liquid_handler is an instrument used for automated liquid transfer and handling.
liquid handler
James Malone
MAT:0000491
proximal tibia
Proximal is a geometric modifier describing the point at which an appendage joins the body or the point nearest to some point of origin, for example proximal tibia.
proximal
James Malone
http://www.taconic.com/wmspage.cfm?parm1=757
Goto-Kakizaki is a rat strain as described in http://www.taconic.com/wmspage.cfm?parm1=757
Goto-Kakizaki
James Malone
http://jaxmice.jax.org/strain/000646.html
NIFSTD:birnlex_577
A/J is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/000646.html
A/J
Tomasz Adamusiak
James Malone
reproductive system cell
Any deviation from the normal structure or function of the endocrine system that is manifested by a characteristic set of symptoms and signs.[accessedResource: NCIt:C3009][accessDate: 10-05-2010]
MSH:D004700
Disorder of endocrine gland[accessedResource: SNOMEDCT:362969004][accessDate: 10-05-2010]
Disorder of endocrine gland
ENDOCRINE SYSTEM DIS
Endocrine disturbance[accessedResource: SNOMEDCT:362969004][accessDate: 10-05-2010]
SNOMEDCT:267489000
Hormone abnormality[accessedResource: SNOMEDCT:84452004][accessDate: 10-05-2010]
Endocrine disturbance NOS (disorder)[accessedResource: SNOMEDCT:267489000][accessDate: 10-05-2010]
Pathological processes of the ENDOCRINE GLANDS, and diseases resulting from abnormal level of available HORMONES.
SNOMEDCT:362969004
endocrine system disease
Endocrine diseases
Endocrine disturbance
ENDOCRINE DISORDERS[accessedResource: NCIt:C3009][accessDate: 10-05-2010]
Endocrinopathy, NOS
Non-Neoplastic Endocrine Disorder
Endocrine disorder[accessedResource: SNOMEDCT:362969004][accessDate: 10-05-2010]
Unspecified endocrine disorder[accessedResource: ICD9:259.9][accessDate: 10-05-2010]
Endocrine Diseases and Manifestations[accessedResource: NCIt:C3009][accessDate: 10-05-2010]
Endocrine gland disease NOS[accessedResource: SNOMEDCT:267475005][accessDate: 10-05-2010]
Disease, Endocrine[accessedResource: MSH:D004700][accessDate: 10-05-2010]
Endocrine disorder NOS (disorder)
Disorder of endocrine system[accessedResource: SNOMEDCT:362969004][accessDate: 10-05-2010]
ENDOCRINE DIS
ENDOCRINE DIS[accessedResource: MSH:D004700][accessDate: 10-05-2010]
Hormone disturbance NOS
NCIt:C27565
System Diseases, Endocrine
Endocrine gland disease NOS (disorder)[accessedResource: SNOMEDCT:267475005][accessDate: 10-05-2010]
GeneRIF:15296474
Diseases of Endocrine System
Diseases, Endocrine[accessedResource: MSH:D004700][accessDate: 10-05-2010]
Endocrine gland disease NOS (disorder)
GeneRIF:15736104
Endocrine System Diseases[accessedResource: MSH:D004700][accessDate: 10-05-2010]
GeneRIF:15240634
Endocrine disturbance NOS (disorder)
Any deviation from the normal structure or function of the endocrine system that is manifested by a characteristic set of symptoms and signs.
Endocrine disturbance NOS[accessedResource: SNOMEDCT:267489000][accessDate: 10-05-2010]
Disease, Endocrine
NCIt:C3009
Endocrine Disorder
Unspecified endocrine disorder
Disorder of endocrine system (disorder)
ICD9:259.9
Hormone abnormality (finding)[accessedResource: SNOMEDCT:84452004][accessDate: 10-05-2010]
ENDOCRINE DISORDERS
Hormone abnormality (finding)
SNOMEDCT:267475005
Disease of endocrine gland
Hormone disturbance[accessedResource: SNOMEDCT:362969004][accessDate: 10-05-2010]
Endocrine disturbance NOS
Pathological processes of the ENDOCRINE GLANDS, and diseases resulting from abnormal level of available HORMONES.[accessedResource: MSH:D004700][accessDate: 10-05-2010]
Endocrine disorder NOS (disorder)[accessedResource: SNOMEDCT:190594008][accessDate: 10-05-2010]
Disorder of endocrine system
Hormone abnormality
Diseases of Endocrine System[accessedResource: MSH:D004700][accessDate: 10-05-2010]
James Malone
ENDOCRINE SYSTEM DIS[accessedResource: MSH:D004700][accessDate: 10-05-2010]
Disease of endocrine gland[accessedResource: SNOMEDCT:362969004][accessDate: 10-05-2010]
Hormone disorders
Hormone disturbance
GeneRIF:15132716
Endocrinopathy[accessedResource: SNOMEDCT:362969004][accessDate: 10-05-2010]
Disorder of endocrine system (disorder)[accessedResource: SNOMEDCT:362969004][accessDate: 10-05-2010]
Endocrinopathy
Endocrine Diseases and Manifestations
Endocrine gland disease NOS
DOID:28
SNOMEDCT:84452004
ENDOCRINE DISORDER NOS[accessedResource: ICD9:259.9][accessDate: 10-05-2010]
ENDOCRINE DISORDER NOS
SNOMEDCT:190594008
MEC1
James Malone
Ele Holloway
DOID:6188
iatrogenic Kaposi's sarcoma
Tomasz Adamusiak
Ele Holloway
C4II
James Malone
Ele Holloway
DOID:2631
serous microcystic adenoma
serous cystadenoma NOS (morphologic abnormality)[accessedResource: DOID:2631][accessDate: 10-05-2010]
Serous Cystoma
serous cystadenoma
serous microcystic adenoma[accessedResource: DOID:2631][accessDate: 10-05-2010]
James Malone
Ele Holloway
serous cystadenoma NOS (morphologic abnormality)
serous Cystoma[accessedResource: DOID:2631][accessDate: 10-05-2010]
YCC16
James Malone
Ele Holloway
SW48
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0002409
James Malone
Haemin
protohemin
CHEBI:50385
InChIKey=BTIJJDXEELBZFS-MXZCRJNTDE
chloro[3,7,12,17-tetramethyl-8,13-divinylporphyrin-2,18-dipropanoato(2-)]iron(III)
chlorido(protoporphyrinato)iron(III)
chloro(protoporphyrinato)iron(III)
A heme b that has formula C34H32ClFeN4O4.
CC1=C(CCC(O)=O)C2=[N]3C1=Cc1c(C)c(C=C)c4C=C5C(C)=C(C=C)C6=[N]5[Fe]3(Cl)(n14)n1c(=C6)c(C)c(CCC(O)=O)c1=C2
hemin
Hemine
InChI=1/C34H34N4O4.ClH.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);1H;/q;;+3/p-3/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;;/fC34H32N4O4.Cl.Fe/h39,41H;1h;/q-2;-1;m
Ele Holloway
C34H32ClFeN4O4
enzyme inhibitors
inhibidores enzimaticos
enzyme inhibitor
inhibidor enzimatico
CHEBI:23924
A compound or agent that combines with an enzyme in such a manner as to prevent the normal substrate-enzyme combination and the catalytic reaction.
inhibiteurs enzymatiques
http://www.ebi.ac.uk/efo/EFO_0001822
James Malone
inhibiteur enzymatique
Tenth Cranial Nerve[accessedResource: NCIt:C12812][accessDate: 10-05-2010]
Tomasz Adamusiak
Pneumogastric Nerve[accessedResource: NCIt:C12812][accessDate: 10-05-2010]
NCIt:C12812
Cranial Nerve X[accessedResource: NCIt:C12812][accessDate: 10-05-2010]
Jie Zheng
Tenth Cranial Nerve
Cranial Nerve X
Pneumogastric Nerve
vagus nerve
Abdomen[accessedResource: NCIt:C12664][accessDate: 10-05-2010]
The portion of the body that lies between the thorax and the pelvis.[accessedResource: NCIt:C12664][accessDate: 10-05-2010]
The portion of the body that lies between the thorax and the pelvis.
James Malone
Abdomen
abdominal cavity
NCIt:C12664
MO_641
A technical replicate is a replicate role where the same BioSample is use e.g. the same pool of RNA used to assess technical (as opposed to biological) variation within an experiment.
technical replicate
James Malone
EB2
James Malone
Ele Holloway
STI 571
C29H31N7O
InChI=1/C29H31N7O/c1-21-5-10-25(18-27(21)34-29-31-13-11-26(33-29)24-4-3-12-30-19-24)32-28(37)23-8-6-22(7-9-23)20-36-16-14-35(2)15-17-36/h3-13,18-19H,14-17,20H2,1-2H3,(H,32,37)(H,31,33,34)/f/h32,34H
CN1CCN(CC1)Cc1ccc(cc1)C(=O)Nc1ccc(C)c(Nc2nccc(n2)-c2cccnc2)c1
CHEBI:45783
James Malone
imatinib
alpha-(4-methyl-1-piperazinyl)-3'-((4-(3-pyridyl)-2-pyrimidinyl)amino)-p-toluidide
A N-methylpiperazine that has formula C29H31N7O.
4-[(4-methylpiperazin-1-yl)methyl]-N-{4-methyl-3-[(4-pyridin-3-ylpyrimidin-2-yl)amino]phenyl}benzamide
http://www.ebi.ac.uk/efo/EFO_0001555
4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE
InChIKey=KTUFNOKKBVMGRW-RPGFEBOUCX
NCIH23
James Malone
Ele Holloway
ZFS:0000002
cleavage 2-cell
James Malone
Tomasz Adamusiak
amygdala central nucleus
amygdala
Amygdaloid complex
Archistriatum[accessedResource: FMAID:61841][accessDate: 10-05-2010]
MAT:0000289
archistriatum
corpus amygdaloideum
Subdivision of basal ganglion of telencephalon which is an almond-shaped gray mass in the dorsomedial part of the temporal lobe.
nucleus amygdalae[accessedResource: BTO:0001042][accessDate: 10-05-2010]
amygdaloid nucleus
NCIt:C12440
nucleus amygdalae
Amygdaloid nuclear complex[accessedResource: FMAID:61841][accessDate: 10-05-2010]
An almond-shaped group of basal nuclei anterior to the inferior horn of the lateral ventricle of the brain, within the temporal lobe. The amygdala is part of the limbic system. (MeSH)
The one of the four basal ganglia in each cerebral hemisphere that is part of the limbic system and consists of an almond-shaped mass of gray matter in the anterior extremity of the temporal lobe.
Amygdaloid nuclear groups
SAEL:4
EV:0100189
An almond-shaped group of basal nuclei anterior to the inferior horn of the lateral ventricle of the brain, within the temporal lobe. The amygdala is part of the limbic system. (MeSH)[accessedResource: NCIt:C12440][accessDate: 10-05-2010]
Subdivision of basal ganglion of telencephalon which is an almond-shaped gray mass in the dorsomedial part of the temporal lobe.[accessedResource: FMAID:61841][accessDate: 10-05-2010]
BTO:0001042
Amygdaloid nuclear complex
The one of the four basal ganglia in each cerebral hemisphere that is part of the limbic system and consists of an almond-shaped mass of gray matter in the anterior extremity of the temporal lobe.[accessedResource: BTO:0001042][accessDate: 10-05-2010]
corpus amygdaloideum[accessedResource: BTO:0001042][accessDate: 10-05-2010]
amygdaloid complex[accessedResource: BTO:0001042][accessDate: 10-05-2010]
FMAID:61841
Amygdaloid Body
Amygdaloid nuclear groups[accessedResource: FMAID:61841][accessDate: 10-05-2010]
amygdaloid nucleus[accessedResource: BTO:0001042][accessDate: 10-05-2010]
NIFSTD:birnlex_1241
amygdaloid body[accessedResource: BTO:0001042][accessDate: 10-05-2010]
James Malone
MA:0000887
http://www.arabidopsis.org/servlets/TairObject?id=1005158867&type=germplasm
CS57843 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158867&type=germplasm
CS57843
James Malone
ST486
James Malone
Ele Holloway
NCIt:C12949
Somatic Cells[accessedResource: NCIt:C12949][accessDate: 10-05-2010]
BTO:0001268
somatic cell
One of the cells of the body that compose the tissues, organs, and parts of that individual other than the germ cells.
One of the cells of the body that compose the tissues, organs, and parts of that individual other than the germ cells.[accessedResource: BTO:0001268][accessDate: 10-05-2010]
James Malone
Somatic Cells
periaqueductal gray
well-differentiated sarcoma
James Malone
James Malone
CHEBI:35444
A substance used in the treatment or control of nematode infestations.
antinematodal agent
http://www.ebi.ac.uk/efo/EFO_0001835
antinematodals
antinematodal drug
antinematodal drugs
A Kc is a cell line.
A Kc derives from a drosophila melanogaster.
Kc
Natural Language Generator 8th April 2010
James Malone
Ele Holloway
Astrocytic Tumor[accessedResource: NCIt:C6958][accessDate: 10-05-2010]
Astrocytoma, Grade I
Astrogliomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Subependymal Giant Cell Astrocytoma
Astrocytoma, Anaplastic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:15799819
GeneRIF:12023424
Pilocytic Astrocytomas
GeneRIF:12111824
Pilocytic Astrocytoma, Juvenile
Childhood Cerebral Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Intracranial Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Juvenile Pilocytic Astrocytomas
Astrocytoma of brain[accessedResource: SNOMEDCT:254938000][accessDate: 10-05-2010]
Tomasz Adamusiak
Astrocytomas, Grade II[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:15178645
Astroglioma
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation (MeSH).[accessedResource: NIFSTD:birnlex_12619][accessDate: 10-05-2010]
Astrocytomas, Intracranial
Astrocytoma, Gemistocytic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytomas, Childhood Cerebral[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma, Grade II
Astrocytoma, no ICD-O subtype (morphologic abnormality)
NIFSTD:birnlex_12619
Oligoastrocytoma, Mixed[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:14729615
Astrocytomas, Protoplasmic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Pilocytic Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma, no ICD-O subtype[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Mixed Oligoastrocytoma
Cerebral Astrocytomas, Childhood
Cystic astrocytoma[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
GeneRIF:12740910
Astrocytic tumour of brain[accessedResource: SNOMEDCT:254938000][accessDate: 10-05-2010]
Astrocytoma, Protoplasmic
astrocytoma of brain (disorder)[accessedResource: DOID:3069][accessDate: 10-05-2010]
astrocytoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:3069][accessDate: 10-05-2010]
GeneRIF:14603438
GeneRIF:15652402
Glioma, Astrocytic
Cerebral Astrocytoma
Intracranial Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytomas, Grade I
GeneRIF:15494521
GeneRIF:11922706
GeneRIF:14654927
Astrocytic Neoplasm
Astrocytoma, Juvenile Pilocytic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Pilocytic Astrocytomas, Juvenile[accessedResource: MSH:D001254][accessDate: 10-05-2010]
A glial tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, subependymal giant cell astrocytoma, and glioblastoma.[accessedResource: NCIt:C6958][accessDate: 10-05-2010]
Oligoastrocytomas, Mixed[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrogliomas
Astrocytoma of brain
Astrocytic tumor of brain
Grade II Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma, NOS[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Gemistocytic Astrocytomas
Astrocytomas, Pilocytic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytic Neoplasm[accessedResource: NCIt:C6958][accessDate: 10-05-2010]
Astrocytic Glioma[accessedResource: NIFSTD:birnlex_12619][accessDate: 10-05-2010]
Diffuse astrocytoma
GeneRIF:15643521
DOID:3069
Cerebral Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma, NOS
[M]Astrocytoma NOS
Astrocytic tumor of brain[accessedResource: SNOMEDCT:254938000][accessDate: 10-05-2010]
Grade III Astrocytomas
GeneRIF:15973775
SNOMEDCT:38713004
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation. (From Devita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2013-7; Holland et al., Cancer Medicine, 3d ed, p1082)
Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Diffuse astrocytoma, low grade
Astrocytoma, low grade
SNOMEDCT:254938000
Fibrillary Astrocytomas
Astrocytoma, Fibrillary[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12916719
Cystic astrocytoma
GeneRIF:12819022
Astrocytic tumor
GeneRIF:12385586
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation (MeSH).
[M]Astrocytoma NOS[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Astrocytoma, Pilocytic
GeneRIF:12747804
GeneRIF:12168116
Astrocytomas, Anaplastic
Protoplasmic Astrocytomas
Astrocytoma, Grade III
GeneRIF:12237771
Astrocytoma, no ICD-O subtype
Astrocytomas, Grade II
Grade III Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytomas, Grade I[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12185598
Astrocytomas, Fibrillary[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Subependymal Giant Cell Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12519873
A glial tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, subependymal giant cell astrocytoma, and glioblastoma.
Anaplastic Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12850541
Astrocytic Gliomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytic Gliomas
Grade III Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
MSH:D001254
Diffuse astrocytoma, low grade[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Astroglioma[accessedResource: NIFSTD:birnlex_12619][accessDate: 10-05-2010]
GeneRIF:12203396
astrocytoma
Astrocytoma, Cerebral[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12435805
Astrocytoma, Gemistocytic
Protoplasmic Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:11783119
Anaplastic Astrocytoma
GeneRIF:16103883
Astrocytic tumour of brain
GeneRIF:15289301
James Malone
Astrocytomas
Astrocytoma, Intracranial
GeneRIF:12133571
Astrocytomas, Cerebral
GeneRIF:11836615
GeneRIF:15902504
NCIt:C6958
Fibrillary Astrocytoma
Oligoastrocytomas, Mixed
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation. (From Devita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2013-7; Holland et al., Cancer Medicine, 3d ed, p1082)[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Childhood Cerebral Astrocytoma
GeneRIF:12077339
Grade I Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
astrocytoma of brain (disorder)
Astrocytoma, low grade[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
GeneRIF:11958417
GeneRIF:12393263
GeneRIF:12829373
Diffuse astrocytoma[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Astrocytomas, Gemistocytic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
"ventral flange"
"dorsale Fulcralapophyse"[accessedResource: TGMA:0000124][accessDate: 10-05-2010]
FBbt:00015288
oocyte
"chitinous wing"
egg
"dorsale Fulcralapophyse"
unfertiized egg[accessedResource: MAT:0000124][accessDate: 10-05-2010]
"ventral flange"[accessedResource: TGMA:0000124][accessDate: 10-05-2010]
female gamete
"fulcral cornu"
TGMA:0000124
lateral flange[accessedResource: TGMA:0000124][accessDate: 10-05-2010]
ZFA:0009008
"Fulcrum"[accessedResource: TGMA:0000124][accessDate: 10-05-2010]
MA:0000388
"ventrale Fulcralapophyse"[accessedResource: TGMA:0000124][accessDate: 10-05-2010]
unfertiized egg
MAT:0000124
The lateral expansion of the posterior part of the cibarium.
oocyte[accessedResource: ZFA:0009008][accessDate: 10-05-2010]
The lateral expansion of the posterior part of the cibarium.[accessedResource: TGMA:0000124][accessDate: 10-05-2010]
SAEL:114
egg[accessedResource: ZFA:0009008][accessDate: 10-05-2010]
"ventrale Fulcralapophyse"
"chitinous wing"[accessedResource: TGMA:0000124][accessDate: 10-05-2010]
lateral flange
"cornu"
unfertilized egg
"cornua"[accessedResource: TGMA:0000124][accessDate: 10-05-2010]
"fulcral cornu"[accessedResource: TGMA:0000124][accessDate: 10-05-2010]
James Malone
"Fulcrum"
unfertilised egg
female gamete[accessedResource: MAT:0000124][accessDate: 10-05-2010]
"cornua"
"cornu"[accessedResource: TGMA:0000124][accessDate: 10-05-2010]
N-1-Naphthalenyl-1,2-ethanediamine dihydrochloride
InChI=1/C12H14N2.2ClH/c13-8-9-14-12-7-3-5-10-4-1-2-6-11(10)12;;/h1-7,14H,8-9,13H2;2*1H/fC12H16N2.2Cl/h13-14H;2*1h/q+2;2*-1
InChIKey=MZNYWPRCVDMOJG-PEHGYZQZCO
N-(1-naphthyl)ethylenediamine dihydrochloride
N-(1-Napthyl)ethylene diamine HCl
N-(1-Naphthyl)ethylenediamine.2HCl
An ethylenediamine dihydrochloride compound having an N-(1-naphthyl) substituent.
CHEBI:53452
C12H16Cl2N2
Marshall's reagent
[Cl-].[Cl-].[NH3+]CC[NH2+]c1cccc2ccccc12
N-(1-Napthyl)ethylene diamine dihydrochloride
Tomasz Adamusiak
N-(1-naphthyl)ethane-1,2-diaminium dichloride
http://www.ebi.ac.uk/efo/EFO_0002736
Ele Holloway
AGS
James Malone
Ele Holloway
BTO:0000211
Nucleus Caudatus
An elongated gray mass of the neostriatum located adjacent to the lateral ventricle of the brain. (MeSH)
Caudatus[accessedResource: FMAID:61833][accessDate: 10-05-2010]
An elongated gray mass of the neostriatum located adjacent to the lateral ventricle of the brain. (MeSH)[accessedResource: NCIt:C12451][accessDate: 10-05-2010]
One of the centrally-located portions of the brain affected by Huntington's Disease. Speech and swallowing problems arise when this region and another region called the putamen are affected.
MA:0000893
NIFSTD:birnlex_1373
FMAID:61833
One of the centrally-located portions of the brain affected by Huntington's Disease. Speech and swallowing problems arise when this region and another region called the putamen are affected.[accessedResource: BTO:0000211][accessDate: 10-05-2010]
EV:0100185
caudate nucleus
James Malone
Nucleus of brain which is an elongated crescent-shaped mass lying parallel and adjacent to the lateral ventricle throughout its extent.[accessedResource: FMAID:61833][accessDate: 10-05-2010]
Nucleus Caudatus[accessedResource: NCIt:C12451][accessDate: 10-05-2010]
MAT:0000513
Tomasz Adamusiak
NCIt:C12451
EMAPA:18207
Caudatus
Nucleus of brain which is an elongated crescent-shaped mass lying parallel and adjacent to the lateral ventricle throughout its extent.
MAT:0000489
left arm
Left is a geometric modifier describing something which is to the left of the median of an organism or organism part, for example left arm.
left
James Malone
methylprednisolone
InChIKey=VHRSUDSXCMQTMA-PJHHCJLFBP
CHEBI:6888
metilprednisolona
InChI=1/C22H30O5/c1-12-8-14-15-5-7-22(27,18(26)11-23)21(15,3)10-17(25)19(14)20(2)6-4-13(24)9-16(12)20/h4,6,9,12,14-15,17,19,23,25,27H,5,7-8,10-11H2,1-3H3/t12-,14-,15-,17-,19+,20-,21-,22-/m0/s1
A 6-methylprednisolone that has formula C22H30O5.
1-dehydro-6alpha-methylhydrocortisone
Medrol
http://www.ebi.ac.uk/efo/EFO_0001475
methylprednisolonum
Medrate
6alpha-methylprednisolone
(6alpha,11beta)-11,17,21-trihydroxy-6-methylpregna-1,4-diene-3,20-dione
James Malone
Medrone
6alpha-methyl-11beta,17alpha,21-triol-1,4-pregnadiene-3,20-dione
Urbason
Delta(1)-6alpha-methylhydrocortisone
[H][C@@]12C[C@H](C)C3=CC(=O)C=C[C@]3(C)[C@@]1([H])[C@@H](O)C[C@@]1(C)[C@@]2([H])CC[C@]1(O)C(=O)CO
Solomet
Methylprednisolon
C22H30O5
11beta,17,21-trihydroxy-6alpha-methylpregna-1,4-diene-3,20-dione
http://www.arabidopsis.org/servlets/TairObject?id=1005158840&type=germplasm
CS57816 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158840&type=germplasm
CS57816
James Malone
http://jaxmice.jax.org/strain/002248.html
NIFSTD:birnlex_106
129S1/SvImJ
Tomasz Adamusiak
James Malone
JAX:100010
B6C3F1 is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/100010.html
B6C3F1
James Malone
CAMA1
James Malone
joint component
James Malone
PO:0020121
lateral root
true
MO_927
Examples of genetic modification include specification of a transgene or the gene knocked-out or details of transient transfection
The genetic modification introduced into the organism from which the biomaterial was derived. Examples of genetic modification include specification of a transgene or the gene knocked-out or details of transient transfection.
genetic modification
Tomasz Adamusiak
Jie Zheng
http://www.arabidopsis.org/servlets/TairObject?id=1005158925&type=germplasm
CS57901 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158925&type=germplasm
CS57901
James Malone
Endocarditis, NOS[accessedResource: SNOMEDCT:56819008][accessDate: 10-05-2010]
A heart disease involving non-infectious inflammation of the endocardium (inner layer of the heart).[accessedResource: DOID:10314][accessDate: 10-05-2010]
Endocarditis, Infective[accessedResource: MSH:D004696][accessDate: 10-05-2010]
A heart disease involving non-infectious inflammation of the endocardium (inner layer of the heart).
Endocarditis (disorder)[accessedResource: DOID:10314][accessDate: 10-05-2010]
DOID:10314
Infective Endocarditis
Endocarditis (disorder)
Inflammation of the inner lining of the heart (ENDOCARDIUM), the continuous membrane lining the four chambers and HEART VALVES. It is often caused by microorganisms including bacteria, viruses, fungi, and rickettsiae. Left untreated, endocarditis can damage heart valves and become life-threatening.
Inflammation of the inner lining of the heart (ENDOCARDIUM), the continuous membrane lining the four chambers and HEART VALVES. It is often caused by microorganisms including bacteria, viruses, fungi, and rickettsiae. Left untreated, endocarditis can damage heart valves and become life-threatening.[accessedResource: MSH:D004696][accessDate: 10-05-2010]
SNOMEDCT:56819008
Inflammation of the endocardium.
Infective Endocarditides[accessedResource: MSH:D004696][accessDate: 10-05-2010]
non-infective endocarditis[accessedResource: DOID:10314][accessDate: 10-05-2010]
endocarditis
non-infective endocarditis
Endocarditides[accessedResource: MSH:D004696][accessDate: 10-05-2010]
Endocarditides
MSH:D004696
James Malone
NCIt:C34582
Endocarditis, NOS
Endocarditides, Infective
Inflammation of the endocardium.[accessedResource: NCIt:C34582][accessDate: 10-05-2010]
TAO:0000151
archinephron[accessedResource: BTO:0001541][accessDate: 10-05-2010]
MAT:0000117
EMAPA:16579
kidney[accessedResource: TAO:0000151][accessDate: 10-05-2010]
head kidney
1. The primordial kidney; a vestigial excretory structure or its rudiments developing in the embryo at four weeks, before the mesonephros. Although nonfunctional, its duct is later used by the mesonephros, which arises caudal to it.n2. The definitive excretory organ of primitive fishes.[accessedResource: BTO:0001541][accessDate: 10-05-2010]
The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.Kimmel et al, 1995.
The first kidney is all vertebrates - it is transitional and disappears soon after it has formed.[accessedResource: MAT:0000117][accessDate: 10-05-2010]
1. The primordial kidney; a vestigial excretory structure or its rudiments developing in the embryo at four weeks, before the mesonephros. Although nonfunctional, its duct is later used by the mesonephros, which arises caudal to it.n2. The definitive excretory organ of primitive fishes.
The first kidney is all vertebrates - it is transitional and disappears soon after it has formed.
pronephric nephron[accessedResource: ZFA:0000151][accessDate: 10-05-2010]
EHDAA:1017
head kidney[accessedResource: BTO:0001541][accessDate: 10-05-2010]
MFO:0003340
embryonic kidney[accessedResource: TAO:0000151][accessDate: 10-05-2010]
pronephros
The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.[accessedResource: ZFA:0000151][accessDate: 10-05-2010]
The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.Kimmel et al, 1995.[accessedResource: TAO:0000151][accessDate: 10-05-2010]
kidney
James Malone
ZFA:0000151
pronephron
The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.
BTO:0001541
XAO:0002000
pronephric nephron
embryonic kidney
archinephron
pronephron[accessedResource: BTO:0001541][accessDate: 10-05-2010]
EV:3000635
Follicular adenoma (morphologic abnormality)[accessedResource: DOID:6204][accessDate: 10-05-2010]
Papillary Adenoma[accessedResource: MSH:D000236][accessDate: 10-05-2010]
A benign epithelial tumor with a glandular organization.[accessedResource: MSH:D000236][accessDate: 10-05-2010]
Papillary Adenoma
GeneRIF:14576819
James Malone
Adenoma, Microcystic[accessedResource: MSH:D000236][accessDate: 10-05-2010]
NCIt:C3684
Thyroid Gland Follicular Adenoma
Follicular Adenoma of Thyroid Gland
Microcystic Adenoma
SNOMEDCT:255034006
Thyroid follicular adenoma (disorder)[accessedResource: DOID:6204][accessDate: 10-05-2010]
DOID:6204
Adenomas, Microcystic
Follicular Adenomas[accessedResource: MSH:D000236][accessDate: 10-05-2010]
Adenomas, Follicular
follicular thyroid adenoma
SNOMEDCT:55021007
MSH:D000236
Adenomas, Monomorphic[accessedResource: MSH:D000236][accessDate: 10-05-2010]
Basal Cell Adenomas[accessedResource: MSH:D000236][accessDate: 10-05-2010]
GeneRIF:15887854
Adenoma, Monomorphic[accessedResource: MSH:D000236][accessDate: 10-05-2010]
Papillary Adenomas[accessedResource: MSH:D000236][accessDate: 10-05-2010]
Follicular adenoma of the Thyroid gland
Follicular Adenoma of the Thyroid[accessedResource: NCIt:C3684][accessDate: 10-05-2010]
Trabecular Adenomas
Follicular Adenoma of Thyroid
Trabecular Adenoma[accessedResource: MSH:D000236][accessDate: 10-05-2010]
Follicular Adenoma of Thyroid[accessedResource: NCIt:C3684][accessDate: 10-05-2010]
Thyroid follicular adenoma (disorder)
Adenomas, Basal Cell
Follicular Adenoma[accessedResource: NCIt:C3684][accessDate: 10-05-2010]
Adenomas[accessedResource: MSH:D000236][accessDate: 10-05-2010]
Trabecular Adenomas[accessedResource: MSH:D000236][accessDate: 10-05-2010]
Monomorphic Adenoma
Adenomas, Monomorphic
A benign epithelial tumor with a glandular organization.
Follicular Adenoma of the Thyroid Gland[accessedResource: NCIt:C3684][accessDate: 10-05-2010]
Adenomas
Adenoma
Follicular Adenoma of Thyroid Gland[accessedResource: NCIt:C3684][accessDate: 10-05-2010]
Follicular Adenoma of the Thyroid
Thyroid Gland Follicular Adenoma[accessedResource: NCIt:C3684][accessDate: 10-05-2010]
Adenoma, Basal Cell
Adenoma[accessedResource: MSH:D000236][accessDate: 10-05-2010]
GeneRIF:14666683
Papillary Adenomas
GeneRIF:11994357
Microcystic Adenomas[accessedResource: MSH:D000236][accessDate: 10-05-2010]
follicular adenoma
Adenoma, Basal Cell[accessedResource: MSH:D000236][accessDate: 10-05-2010]
Adenoma, Trabecular
Follicular adenoma (morphologic abnormality)
Wikipedia: http://en.wikipedia.org/wiki/Congenital_absence_of_the_vas_deferens
Congenital bilateral absence of the vas deferens (CAVD) is a condition in which the two vas deferens, male reproductive organs, fail to form properly prior to birth.
congenital bilateral absence of the vas deferens
James Malone
Rett's disorder (disorder)[accessedResource: SNOMEDCT:68618008][accessDate: 10-05-2010]
RETTS DIS[accessedResource: MSH:D015518][accessDate: 10-05-2010]
GeneRIF:12081725
Rett Disorder
GeneRIF:15057977
GeneRIF:11768391
Autism-Dementia-Ataxia-Loss of Purposeful Hand Use Syndrome
GeneRIF:12770674
DOID:1206
Rett syndrome
GeneRIF:14751287
Rett Disorder[accessedResource: NIFSTD:birnlex_12770][accessDate: 10-05-2010]
GeneRIF:12442230
NIFSTD:birnlex_12770
An inherited neurological developmental disorder that is associated with X-LINKED INHERITANCE and may be lethal in utero to hemizygous males. The affected female is normal until the age of 6-25 months when progressive loss of voluntary control of hand movements and communication skills; ATAXIA; SEIZURES; autistic behavior; intermittent HYPERVENTILATION; and HYPERAMMONEMIA appear. (From Menkes, Textbook of Child Neurology, 5th ed, p199)
GeneRIF:11432961
GeneRIF:16015284
GeneRIF:12107440
GeneRIF:14974082
James Malone
GeneRIF:12160743
GeneRIF:12111643
GeneRIF:12707946
Cerebroatrophic Hyperammonemias[accessedResource: MSH:D015518][accessDate: 10-05-2010]
GeneRIF:11896459
RETTS DIS
SNOMEDCT:68618008
GeneRIF:12449561
Cerebroatrophic hyperammonaemia
cerebroatrophic hyperammonemia[accessedResource: DOID:1206][accessDate: 10-05-2010]
Rett's Syndrome[accessedResource: MSH:D015518][accessDate: 10-05-2010]
Rett's Disorder
RTS - Rett syndrome[accessedResource: SNOMEDCT:68618008][accessDate: 10-05-2010]
An inherited neurological developmental disorder that is associated with X-LINKED INHERITANCE and may be lethal in utero to hemizygous males. The affected female is normal until the age of 6-25 months when progressive loss of voluntary control of hand movements and communication skills; ATAXIA; SEIZURES; autistic behavior; intermittent HYPERVENTILATION; and HYPERAMMONEMIA appear (MeSH).
GeneRIF:14649549
GeneRIF:16077729
RETT DIS
GeneRIF:15954098
Rett's disorder[accessedResource: SNOMEDCT:68618008][accessDate: 10-05-2010]
An inherited neurological developmental disorder that is associated with X-LINKED INHERITANCE and may be lethal in utero to hemizygous males. The affected female is normal until the age of 6-25 months when progressive loss of voluntary control of hand movements and communication skills; ATAXIA; SEIZURES; autistic behavior; intermittent HYPERVENTILATION; and HYPERAMMONEMIA appear. (From Menkes, Textbook of Child Neurology, 5th ed, p199)[accessedResource: MSH:D015518][accessDate: 10-05-2010]
RETT DIS[accessedResource: MSH:D015518][accessDate: 10-05-2010]
Cerebroatrophic hyperammonaemia[accessedResource: SNOMEDCT:68618008][accessDate: 10-05-2010]
GeneRIF:11955928
Syndrome, Rett's
GeneRIF:15809268
Rett's disorder (disorder)
GeneRIF:12170461
Tomasz Adamusiak
MSH:D015518
Hyperammonemia, Cerebroatrophic
Autism-Dementia-Ataxia-Loss of Purposeful Hand Use Syndrome[accessedResource: NIFSTD:birnlex_12770][accessDate: 10-05-2010]
An inherited neurological developmental disorder that is associated with X-LINKED INHERITANCE and may be lethal in utero to hemizygous males. The affected female is normal until the age of 6-25 months when progressive loss of voluntary control of hand movements and communication skills; ATAXIA; SEIZURES; autistic behavior; intermittent HYPERVENTILATION; and HYPERAMMONEMIA appear (MeSH).[accessedResource: NIFSTD:birnlex_12770][accessDate: 10-05-2010]
Hyperammonemias, Cerebroatrophic
GeneRIF:16077736
RTS - Rett syndrome
diencephalon
EMAPA:16896
James Malone
FMAID:62001
MFO:0002280
Mature diencephalon
Between brain[accessedResource: FMAID:62001][accessDate: 10-05-2010]
Organ component of neuraxis that has as its parts the epithalamus, thalamus, hypothalamus, subthalamus. There is only one diencephalon.[accessedResource: FMAID:62001][accessDate: 10-05-2010]
MAT:0000420
The posterior subdivision of the forebrain.[accessedResource: BTO:0000342][accessDate: 10-05-2010]
Tomasz Adamusiak
betweenbrain
The posterior subdivision of the forebrain.
ZFA:0000101
Organ component of neuraxis that has as its parts the epithalamus, thalamus, hypothalamus, subthalamus. There is only one diencephalon.
The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis). Kimmel et al, 1995.
Interbrain[accessedResource: FMAID:62001][accessDate: 10-05-2010]
The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis). Kimmel et al, 1995.[accessedResource: TAO:0000101][accessDate: 10-05-2010]
XAO:0000013
NIFSTD:birnlex_1503
Mature diencephalon[accessedResource: FMAID:62001][accessDate: 10-05-2010]
Interbrain
The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis).[accessedResource: ZFA:0000101][accessDate: 10-05-2010]
EHDAA:3472
BTO:0000342
TAO:0000101
MA:0000171
The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis).
true
James Malone
A picomole is a substance unit equal to 10^-12 mol.
http://www.ebi.ac.uk/efo/EFO_0001798
picomole
Tomasz Adamusiak
MO_688
Jie Zheng
pmol
A substance unit equal to 10^[-12] mol.
true
obsolete_percent oxygen
SAEL:81
PNS - somatic
peripheral nervous system - human
peripheral nerve[accessedResource: MAT:0000099][accessDate: 10-05-2010]
PNS - somatic[accessedResource: MAT:0000099][accessDate: 10-05-2010]
ZFA:0000070
MA:0000230
peripheral nervous system - human[accessedResource: MAT:0000099][accessDate: 10-05-2010]
peripheral nerve
James Malone
somatic nervous system
WBbt:0005760
FMAID:9903
MAT:0000099
NIFSTD:birnlex_2103
toxins
http://www.ebi.ac.uk/efo/EFO_0001629
Poisonous substance produced by a biological organism such as a microbe, animal or plant.
toxin
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158740&type=germplasm
CS57716 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158740&type=germplasm
CS57716
James Malone
Diet - low in fat[accessedResource: SNOMEDCT:16208003][accessDate: 10-05-2010]
Low fat diet (finding)[accessedResource: SNOMEDCT:16208003][accessDate: 10-05-2010]
Low fat diet (finding)
Jie Zheng
LF - Low fat diet[accessedResource: SNOMEDCT:16208003][accessDate: 10-05-2010]
Low fat diet, NOS[accessedResource: SNOMEDCT:16208003][accessDate: 10-05-2010]
low fat diet
Low fat diet, NOS
Tomasz Adamusiak
LF - Low fat diet
LFD - Low fat diet
SNOMEDCT:16208003
Diet - low in fat
LFD - Low fat diet[accessedResource: SNOMEDCT:16208003][accessDate: 10-05-2010]
NIFSTD:birnlex_376
James Malone
A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs. E.g Drosophila melanogaster
organism
A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs.
MO_508
Tomasz Adamusiak
Drosophila melanogaster
true
http://www.ebi.ac.uk/efo/EFO_0000634
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0002030
A normalization data transformation is a data transformation that has objective normalization.
normalization data transformation
James Malone
James Malone
BTO:0001419
urine
Waste material that is secreted by the kidney in vertebrates, is rich in end products of protein metabolism together with salts and pigments, and forms a clear amber and usually slightly acid fluid in mammals but is semisolid in birds and reptiles.
Tomasz Adamusiak
MO_399
Waste material that is secreted by the kidney in vertebrates, is rich in end products of protein metabolism together with salts and pigments, and forms a clear amber and usually slightly acid fluid in mammals but is semisolid in birds and reptiles.[accessedResource: BTO:0001419][accessDate: 10-05-2010]
Jie Zheng
ZFS:0000012
blastula high
James Malone
rectal carcinoma
FMA:82493
Bronchial Alveolus
pulmonary alveolus
James Malone
Anatomical structure which is a primary subdivision of whole organism. The mereological sum of these is the whole organism.[accessedResource: TAO:0001308][accessDate: 10-05-2010]
anatomical site
Principal body part subdivision
Anatomical structure, which is a subdivision of a cardinal body part; it may exclude bones; is demarcated from other subdivisions of the same cardinal body part by anatomical surfaces or lines or topographical references; together with other contiguous subdivisions of the same cardinal body part, it constitutes a cardinal body part. Examples: thorax, perineum, back of neck, forearm, hand, phalanx, nose, auricle of ear, scrotum.[accessedResource: FMAID:67504][accessDate: 10-05-2010]
Principal body part subdivision[accessedResource: FMAID:67504][accessDate: 10-05-2010]
Subdivision of cardinal body part
TAO:0001308
body part
organism subdivision
anatomical site[accessedResource: MAT:0000293][accessDate: 10-05-2010]
MAT:0000293
subdivision of cardinal body part[accessedResource: MAT:0000293][accessDate: 10-05-2010]
animal body part
organism subdivision[accessedResource: MAT:0000293][accessDate: 10-05-2010]
FMAID:67504
EV:0100008
James Malone
XAO:0003013
body part[accessedResource: MAT:0000293][accessDate: 10-05-2010]
Anatomical structure, which is a subdivision of a cardinal body part; it may exclude bones; is demarcated from other subdivisions of the same cardinal body part by anatomical surfaces or lines or topographical references; together with other contiguous subdivisions of the same cardinal body part, it constitutes a cardinal body part. Examples: thorax, perineum, back of neck, forearm, hand, phalanx, nose, auricle of ear, scrotum.
Anatomical structure which is a primary subdivision of whole organism. The mereological sum of these is the whole organism.
COC(=O)Nc1nc2cc(ccc2[nH]1)C(=O)c1cccs1
nocodazol
methyl [5-(2-thienylcarbonyl)-1H-benzimidazol-2-yl]carbamate
N-(5-(2-thenoyl)-2-benzimidazolyl)carbamic acid methyl ester
C14H11N3O3S
http://www.ebi.ac.uk/efo/EFO_0001580
InChIKey=KYRVNWMVYQXFEU-KJQBJTEXCI
CHEBI:34892
A thiophene that has formula C14H11N3O3S.
nocodazolum
(5-(2-thienylcarbonyl)-1H-benzimidazol-2-yl)-carbamic acid methyl ester
methyl (5-(2-thienylcarbonyl))-1H-benzimidazole-2-ylcarbamate
InChI=1/C14H11N3O3S/c1-20-14(19)17-13-15-9-5-4-8(7-10(9)16-13)12(18)11-3-2-6-21-11/h2-7H,1H3,(H2,15,16,17,19)/f/h15,17H
nocodazole
MO_734
hardware variation design
Tomasz Adamusiak
Duplicate use EFO_0000900
NCIt:C12462
Ganglion with sensory function within the vertebral column.[accessedResource: NCIt:C12462][accessDate: 10-05-2010]
true
obsolete_dorsal root ganglion
Sensory ganglia located on the dorsal spinal roots within the vertebral column. (MeSH)
Ganglion with sensory function within the vertebral column.
Dorsal Root Ganglion
polymorphonuclear neutrophil[accessedResource: CL:0000775][accessDate: 10-05-2010]
poly
CL:0000775
polynuclear neutrophilic leukocyte[accessedResource: CL:0000775][accessDate: 10-05-2010]
James Malone
polymorphonuclear leukocyte[accessedResource: CL:0000775][accessDate: 10-05-2010]
neutrocyte
Any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes.
neutrophil leukocyte
neutrocyte[accessedResource: CL:0000775][accessDate: 10-05-2010]
Ele Holloway
PMN[accessedResource: CL:0000775][accessDate: 10-05-2010]
polymorphonuclear leukocyte
PMN
polymorphonuclear leucocyte[accessedResource: CL:0000775][accessDate: 10-05-2010]
neutrophilic leukocyte[accessedResource: CL:0000775][accessDate: 10-05-2010]
neutrophilic leucocyte
neutrophil leucocyte[accessedResource: CL:0000775][accessDate: 10-05-2010]
neutrophil leucocyte
polymorphonuclear neutrophil
neutrophil
neutrophilic leukocyte
polynuclear neutrophilic leucocyte[accessedResource: CL:0000775][accessDate: 10-05-2010]
polynuclear neutrophilic leukocyte
polymorphonuclear leucocyte
poly[accessedResource: CL:0000775][accessDate: 10-05-2010]
neutrophil leukocyte[accessedResource: CL:0000775][accessDate: 10-05-2010]
Any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes.[accessedResource: CL:0000775][accessDate: 10-05-2010]
polynuclear neutrophilic leucocyte
neutrophilic leucocyte[accessedResource: CL:0000775][accessDate: 10-05-2010]
Tissue which consists of fibroblasts, osteocytes or chondrocytes and intercellular matrix produced by these cells. Examples: bone (tissue), dense regular elastic tissue, areolar tissue, neuroglia, adipose tissue.[accessedResource: FMAID:9640][accessDate: 10-05-2010]
tendon[accessedResource: MAT:0000301][accessDate: 10-05-2010]
The tissue which binds together and is the support of the various structures of the body. It is made up of fibroblasts, fibroglia, collagen fibrils, and elastic fibrils. It is derived from the mesoderm and in a broad sense includes the collagenous, elastic, mucous, reticular, osseous, and cartilaginous tissue. Some also include the blood in this group of tissues. Connective tissue is classified according to concentration of fibers as loose (areolar) and dense, the latter having more abundant fibers than the former.
tendon
fascia[accessedResource: MAT:0000301][accessDate: 10-05-2010]
MAT:0000301
connective tissue
SAEL:23
fascia
Tissue which consists of fibroblasts, osteocytes or chondrocytes and intercellular matrix produced by these cells. Examples: bone (tissue), dense regular elastic tissue, areolar tissue, neuroglia, adipose tissue.
EV:0100150
tendon cell[accessedResource: MAT:0000301][accessDate: 10-05-2010]
FMAID:9640
James Malone
muscle attachment cell
Portion of connective tissue
BTO:0000421
tendon cell
Portion of connective tissue[accessedResource: FMAID:9640][accessDate: 10-05-2010]
The tissue which binds together and is the support of the various structures of the body. It is made up of fibroblasts, fibroglia, collagen fibrils, and elastic fibrils. It is derived from the mesoderm and in a broad sense includes the collagenous, elastic, mucous, reticular, osseous, and cartilaginous tissue. Some also include the blood in this group of tissues. Connective tissue is classified according to concentration of fibers as loose (areolar) and dense, the latter having more abundant fibers than the former.[accessedResource: BTO:0000421][accessDate: 10-05-2010]
XAO:0000173
TAO:0009189
muscle attachment cell[accessedResource: TAO:0009189][accessDate: 10-05-2010]
anterior midgut inclusive primordium[accessedResource: FBbt:00000444][accessDate: 10-05-2010]
P2 antEndoP
antMGP2
P2 antEndoP[accessedResource: FBbt:00000444][accessDate: 10-05-2010]
antMGP2[accessedResource: FBbt:00000444][accessDate: 10-05-2010]
anterior midgut inclusive primordium
anterior midgut primordium
FBbt:00000444
James Malone
http://jaxmice.jax.org/strain/009262.html
ILSXISS16/TejJ
Tomasz Adamusiak
2.4
true
obsolete_Arbisopsis thaliana
now using NCI taxon URI:
http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702
alpha-dextrose
alpha-D-glucopyranose
http://www.ebi.ac.uk/efo/EFO_0001482
CHEBI:17925
A D-glucopyranose that has formula C6H12O6.
InChI=1/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6+/m1/s1
OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O
alpha-D-glucose
InChIKey=WQZGKKKJIJFFOK-DVKNGEFBBQ
C6H12O6
Tonsils[accessedResource: NCIt:C12802][accessDate: 10-05-2010]
Either of a pair of prominent masses of lymphoid tissue that lie one on each side of the throat between the anterior and posterior pillars of the fauces.
Adenoids
Tonsils
The two organs situated in the throat on either side of the narrow passage from the mouth to the pharynx. They are composed of lymphoid tissues.[accessedResource: NCIt:C12802][accessDate: 10-05-2010]
NCIt:C12802
James Malone
Either of a pair of prominent masses of lymphoid tissue that lie one on each side of the throat between the anterior and posterior pillars of the fauces.[accessedResource: BTO:0001387][accessDate: 10-05-2010]
tonsil
BTO:0001387
The two organs situated in the throat on either side of the narrow passage from the mouth to the pharynx. They are composed of lymphoid tissues.
James Malone
Jie Zheng
A volume unit which is equal to one millionth of a cubic meter or 10^[-9] m^[3], or to 1 ml.
MO_834
cc
cm^3
Tomasz Adamusiak
cubic centimeter
A cubic centimeter is a volume unit which is equal to one millionth of a cubic meter or 10^[-9] m^[3], or to 1 ml.
true
http://www.ebi.ac.uk/efo/EFO_0001714
Bone Marrow
NCIt:C12431
Reticuloendothelial System, Bone Marrow[accessedResource: NCIt:C12431][accessDate: 10-05-2010]
The tissue occupying the spaces of bone. It consists of blood vessel sinuses and a network of hematopoietic cells which give rise to the red cells, white cells, and megakaryocytes.
true
Bone Marrow[accessedResource: NCIt:C12431][accessDate: 10-05-2010]
obsolete_bone marrow
Duplicate term : see bone marrow EFO_0000868
Reticuloendothelial System, Bone Marrow
The tissue occupying the spaces of bone. It consists of blood vessel sinuses and a network of hematopoietic cells which give rise to the red cells, white cells, and megakaryocytes.[accessedResource: NCIt:C12431][accessDate: 10-05-2010]
A key artery located in the front of the neck that carries blood from the heart to the brain. Cholesterol plaques on the inner wall of the carotid artery can lead to stroke.
TAO:0000097
EV:0100379
ZFA:0000097
carotid artery
Artery originating at the junction of the first two aortic arches and supplying the anterior brain. Kimmel et al, 1995.
Artery originating at the junction of the first two aortic arches and supplying the anterior brain.
MA:0001925
XAO:0000345
Trunk of common carotid tree[accessedResource: FMAID:3939][accessDate: 10-05-2010]
FMAID:3939
Common carotid artery
Artery originating at the junction of the first two aortic arches and supplying the anterior brain.[accessedResource: ZFA:0000097][accessDate: 10-05-2010]
EHDAA:6373
Artery originating at the junction of the first two aortic arches and supplying the anterior brain. Kimmel et al, 1995.[accessedResource: TAO:0000097][accessDate: 10-05-2010]
BTO:0000168
internal carotid artery[accessedResource: TAO:0000097][accessDate: 10-05-2010]
James Malone
Trunk of common carotid tree
Common carotid artery[accessedResource: FMAID:3939][accessDate: 10-05-2010]
internal carotid artery
A key artery located in the front of the neck that carries blood from the heart to the brain. Cholesterol plaques on the inner wall of the carotid artery can lead to stroke.[accessedResource: BTO:0000168][accessDate: 10-05-2010]
EMAPA:18609
pancreatic mesenchyme
Tomasz Adamusiak
Jie Zheng
http://www.arabidopsis.org/servlets/TairObject?id=1005158622&type=germplasm
CS57598 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158622&type=germplasm
CS57598
James Malone
A temporal measurement of the period after successful treatment in which there is no appearance of the symptoms or effects of the disease.
disease free survival
James Malone
ischaemia reperfusion injury
http://www.arabidopsis.org/servlets/TairObject?id=1005158761&type=germplasm
CS57737 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158761&type=germplasm
CS57737
James Malone
Irregular microscopic structures scattered throughout the pancreas and comprising its endocrine part (the endocrine pancreas). In humans, they are composed of at least four types of cells: the alpha cells, which secrete glucagon; the beta cells, which are the most abundant and secrete insulin; the delta cells, which secrete somatostatin; and the PP cells, which secrete pancreatic polypeptide. Degeneration of the beta cells, whose secretion (insulin) is important in carbohydrate metabolism, is the major cause of type I diabetes mellitus.
Irregular microscopic structures scattered throughout the pancreas and comprising its endocrine part (the endocrine pancreas). In humans, they are composed of at least four types of cells: the alpha cells, which secrete glucagon; the beta cells, which are the most abundant and secrete insulin; the delta cells, which secrete somatostatin; and the PP cells, which secrete pancreatic polypeptide. Degeneration of the beta cells, whose secretion (insulin) is important in carbohydrate metabolism, is the major cause of type I diabetes mellitus.[accessedResource: BTO:0000991][accessDate: 10-05-2010]
island of Langerhans
island of Langerhans[accessedResource: BTO:0000991][accessDate: 10-05-2010]
BTO:0000991
James Malone
island of pancreas
island of pancreas[accessedResource: BTO:0000991][accessDate: 10-05-2010]
islet of Langerhans
pancreatic islet
pancreatic islet[accessedResource: BTO:0000991][accessDate: 10-05-2010]
NIFSTD:birnlex_2052
60 seconds duration of centrifugation
A temporal measurement of the time between two specified points.
duration
Tomasz Adamusiak
James Malone
BTO:0001685
aortic smooth muscle
aortic smooth muscle[accessedResource: BTO:0001685][accessDate: 10-05-2010]
aorta smooth muscle
MJ
James Malone
Ele Holloway
KG1
James Malone
Ele Holloway
Leiomyoma of body of uterus[accessedResource: SNOMEDCT:95315005][accessDate: 10-05-2010]
UTERUS FIBROMA[accessedResource: DOID:13223][accessDate: 10-05-2010]
GeneRIF:15706419
Body of Uterus Leiomyoma
Uterine Corpus Leiomyoma
Leiomyoma, no ICD-O subtype (morphologic abnormality)
Leiomyoma of Uterine Body[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Fibroid of the Uterine Body[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Corpus Uteri Fibroid
Fibroid of Uterine Corpus
GeneRIF:12594000
Leiomyoma, NOS[accessedResource: SNOMEDCT:44598004][accessDate: 10-05-2010]
Corpus Uteri Leiomyoma
Fibroids[accessedResource: SNOMEDCT:95315005][accessDate: 10-05-2010]
SNOMEDCT:44598004
GeneRIF:12548199
Fibroid of Corpus Uteri
Myofibroma[accessedResource: SNOMEDCT:44598004][accessDate: 10-05-2010]
Body of Uterus Leiomyoma[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Fibroid of the Uterine Corpus[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Leiomyoma of Uterine Corpus[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Leiomyoma of Uterine Corpus
Fibromyoma
An uncommon benign neoplasm arising from the bone. It is characterized by the presence of spindle-shaped or stellate chondrocytes, a lobulated growth pattern, myxoid stroma formation, and sometimes multinucleated giant cells. It has been associated with chromosomal rearrangement of 6q13 and 6q25 bands. The most common clinical symptom is mild, localized pain.
GeneRIF:11788902
Uterine leiomyoma NOS (disorder)
Fibroid of the Body of Uterus[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Uterine Corpus Fibroid[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Fibroma, Uterine[accessedResource: MSH:D007889][accessDate: 10-05-2010]
Fibroid[accessedResource: MSH:D007889][accessDate: 10-05-2010]
Fibromyomas[accessedResource: MSH:D007889][accessDate: 10-05-2010]
GeneRIF:12634644
GeneRIF:12065682
MSH:D007889
Uterine fibroids[accessedResource: SNOMEDCT:44598004][accessDate: 10-05-2010]
GeneRIF:15769981
Myofibroma
Fibroid Tumors
Leiomyoma of Corpus Uteri
Leiomyoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:44598004][accessDate: 10-05-2010]
GeneRIF:12649198
GeneRIF:15322223
GeneRIF:15572421
Leiomyoma of the Corpus Uteri[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Leiomyoma of the Body of Uterus[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Uterine leiomyoma NOS[accessedResource: SNOMEDCT:189106003][accessDate: 10-05-2010]
Leiomyofibroma[accessedResource: SNOMEDCT:44598004][accessDate: 10-05-2010]
Uterine Body Leiomyoma
Fibroid of the Body of Uterus
Fibroids
Leiomyoma, NOS
Fibroid Tumors[accessedResource: MSH:D007889][accessDate: 10-05-2010]
Leiomyoma of the Uterine Body[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
GeneRIF:16009172
UTERUS FIBROMA
GeneRIF:11756572
GeneRIF:15749523
SNOMEDCT:189106003
Corpus Uteri Fibroid[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
GeneRIF:15972578
Leiomyoma of body of uterus
Uterine leiomyoma NOS
Uterus, Fibroid[accessedResource: MSH:D007889][accessDate: 10-05-2010]
Fibroid of the Corpus Uteri[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Leiomyoma of Corpus Uteri[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
GeneRIF:15004438
ICD9:218
GeneRIF:15474102
GeneRIF:15033949
Fibroid of Corpus Uteri[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Fibroid of Uterine Corpus[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
GeneRIF:15231681
GeneRIF:16024248
Fibroma, Uterine
Uterine Body Fibroid
Uterine Fibromas
Uterine Corpus Leiomyomata[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Corpus Uteri Leiomyoma[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Leiomyoma of uterus, unspecified[accessedResource: ICD9:218.9][accessDate: 10-05-2010]
GeneRIF:15083381
Leiomyoma of the Body of Uterus
Leiomyoma of the Corpus Uteri
James Malone
Fibroid
Fibroid of the Uterine Corpus
GeneRIF:15334541
Fibroid Tumor[accessedResource: MSH:D007889][accessDate: 10-05-2010]
Fibromas, Uterine[accessedResource: MSH:D007889][accessDate: 10-05-2010]
Fibroid of Uterine Body
A benign smooth muscle neoplasm arising from the body of the uterus. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Fibroid of the Uterine Body
uterine fibroid
Fibroid of Uterine Body[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Fibromyoma[accessedResource: MSH:D007889][accessDate: 10-05-2010]
Uterine leiomyoma (disorder)[accessedResource: SNOMEDCT:95315005][accessDate: 10-05-2010]
Uterus, Fibroid
uterine Fibroids
Leiomyoma of Uterine Body
uterine leiomyoma
Fibroleiomyoma[accessedResource: SNOMEDCT:44598004][accessDate: 10-05-2010]
GeneRIF:14632190
Leiomyoma of the Uterine Corpus
Uterine Body Fibroid[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Body of Uterus Fibroid
Leiomyoma[accessedResource: SNOMEDCT:44598004][accessDate: 10-05-2010]
GeneRIF:12177782
A benign tumor derived from smooth muscle tissue, also known as a fibroid tumor. They rarely occur outside of the UTERUS and the GASTROINTESTINAL TRACT but can occur in the SKIN and SUBCUTANEOUS TISSUE, probably arising from the smooth muscle of small blood vessels in these tissues.[accessedResource: MSH:D007889][accessDate: 10-05-2010]
Leiomyomas
Uterine leiomyoma (disorder)
Body of Uterus Fibroid[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
DOID:13223
Fibroid Tumor
Leiomyoma, no ICD-O subtype
GeneRIF:12215337
Fibroleiomyoma
Leiomyoma of the Uterine Body
Lipoleiomyoma[accessedResource: SNOMEDCT:44598004][accessDate: 10-05-2010]
Uterine Corpus Leiomyomata
GeneRIF:15536154
GeneRIF:11865300
GeneRIF:12634633
Uterine Corpus Fibroid
GeneRIF:15604209
ICD9:218.9
Leiomyofibroma
Leiomyoma, no ICD-O subtype[accessedResource: SNOMEDCT:44598004][accessDate: 10-05-2010]
A benign smooth muscle neoplasm arising from the body of the uterus. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.
Fibroid of Body of Uterus
GeneRIF:15704521
Fibroid of the Corpus Uteri
Lipoleiomyoma
NCIt:C3434
Leiomyoma of uterus, unspecified
GeneRIF:14698203
SNOMEDCT:95315005
GeneRIF:12766905
GeneRIF:15051039
Uterine Corpus Leiomyoma[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
GeneRIF:14557488
Leiomyomas[accessedResource: MSH:D007889][accessDate: 10-05-2010]
uterine leiomyoma NOS (disorder)[accessedResource: DOID:13223][accessDate: 10-05-2010]
A benign tumor derived from smooth muscle tissue, also known as a fibroid tumor. They rarely occur outside of the UTERUS and the GASTROINTESTINAL TRACT but can occur in the SKIN and SUBCUTANEOUS TISSUE, probably arising from the smooth muscle of small blood vessels in these tissues.
Uterine leiomyoma - fibroids
Plexiform leiomyoma[accessedResource: DOID:13223][accessDate: 10-05-2010]
Plexiform leiomyoma
Uterine leiomyoma[accessedResource: SNOMEDCT:95315005][accessDate: 10-05-2010]
Uterine Body Leiomyoma[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Fibromyomas
Fibroid of Body of Uterus[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
GeneRIF:12097287
Leiomyoma of the Uterine Corpus[accessedResource: NCIt:C3434][accessDate: 10-05-2010]
Uterine leiomyoma - fibroids[accessedResource: SNOMEDCT:95315005][accessDate: 10-05-2010]
GeneRIF:14995917
Leiomyoma
retinoblastoma
STA ET2.1
STA-ET-2.1
James Malone
Ele Holloway
TERV-AntiSenseB56
James Malone
SH4
James Malone
Ele Holloway
A b117h is an ara c resistant murine leukemia.
B117H
Natural Language Generator 8th April 2010
James Malone
Ele Holloway
1,1-Dimethyl-2-oxohydrazine
Dimethylnitrosamine
DMN
Dimethylnitrosoamine
N,N-Dimethylnitrosamine
CN(C)N=O
A nitrosamine that has formula C2H6N2O.
C2H6N2O
N-methyl-N-nitrosomethanamine
http://www.ebi.ac.uk/efo/EFO_0001579
InChIKey=UMFJAHHVKNCGLG-UHFFFAOYAI
InChI=1/C2H6N2O/c1-4(2)3-5/h1-2H3
N-nitrosodimethylamine
CHEBI:35807
NCIt:C15407
family study
Research conducted on members of families, examining the affects of genetics, the environment, or twin offspring.
Research conducted on members of families, examining the affects of genetics, the environment, or twin offspring.[accessedResource: NCIt:C15407][accessDate: 10-05-2010]
family based study
Tomasz Adamusiak
James Malone
true
C
http://www.ebi.ac.uk/efo/EFO_0001700
degree celsius
A temperature derived unit which is equal to one Kelvin degree. However, they have their zeros at different points. The Centigrade scale has its zero at 273.15 K.
degree centigrade
Jie Zheng
Tomasz Adamusiak
MO_980
Degree celsius is a temperature derived unit which is equal to one Kelvin degree. However, they have their zeros at different points. The Centigrade scale has its zero at 273.15 K.
James Malone
R8
James Malone
ICD9:171.8
SNOMEDCT:269469005
A malignant mesenchymal neoplasm arising exclusively from the soft tissues. Representative examples include soft tissue sarcoma, extraosseous Ewing sarcoma/peripheral primitive neuroectodermal tumor, and malignant hemangiopericytoma.[accessedResource: NCIt:C4867][accessDate: 10-05-2010]
Malignant tumor of soft tissue
MAL NEO SOFT TISSUE ARM
James Malone
Malignant neoplasm of connective and other soft tissue of lower limb, including hip
Malignant neoplasm of connective and other soft tissue[accessedResource: SNOMEDCT:187985009][accessDate: 10-05-2010]
Malignant neoplasm of connective and other soft tissue of pelvis
MAL NEO SOFT TISSUE HEAD[accessedResource: ICD9:171.0][accessDate: 10-05-2010]
MAL NEO SOFT TIS THORAX[accessedResource: ICD9:171.4][accessDate: 10-05-2010]
Malignant Soft Tissue Tumor
ICD9:171.6
GeneRIF:12435619
connective and soft tissue neoplasm
Malignant neoplasm of soft tissue
MAL NEO SOFT TISSUE NEC[accessedResource: ICD9:171.8][accessDate: 10-05-2010]
ICD9:171.7
MAL NEO SOFT TISSUE HEAD
GeneRIF:12112526
Malignant Tumor of Soft Tissue[accessedResource: NCIt:C4867][accessDate: 10-05-2010]
Malignant Neoplasm of the Soft Tissue
Sarcoma of the Soft Tissue[accessedResource: NCIt:C9306][accessDate: 10-05-2010]
MAL NEO SOFT TISSUE NOS[accessedResource: ICD9:171.9][accessDate: 10-05-2010]
GeneRIF:15809709
A malignant mesenchymal neoplasm arising from muscle tissue, adipose tissue, blood vessels, fibrous tissue, or other supportive tissues excluding the bones.
SNOMEDCT:187985009
Malignant neoplasm of connective and other soft tissue of head, face, and neck
GeneRIF:12539045
GeneRIF:14507652
Type of cancer of the bone, cartilage, fat, muscle, blood vessels, or other connective or supportive tissue.
Sarcoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:2424003][accessDate: 10-05-2010]
GeneRIF:14612455
Mesenchymal tumour, malignant[accessedResource: SNOMEDCT:2424003][accessDate: 10-05-2010]
NCIt:C9306
MAL NEOPL TRUNK NOS[accessedResource: ICD9:171.7][accessDate: 10-05-2010]
Connective Tissue Sarcoma
Malignant neoplasm of connective and other soft tissue of thorax
Malignant Soft Tissue Tumor[accessedResource: NCIt:C4867][accessDate: 10-05-2010]
Malignant neoplasm of connective and other soft tissue of upper limb, including shoulder[accessedResource: ICD9:171.2][accessDate: 10-05-2010]
Malignant tumour of soft tissue
MAL NEO SOFT TIS THORAX
Mesenchymal tumor, malignant
Malignant Tumor of the Soft Tissue[accessedResource: NCIt:C4867][accessDate: 10-05-2010]
A cancer that affects connective tissue resulting in mesoderm proliferation.
Malignant mesenchymal tumour
Malignant neoplasm of connective and other soft tissue of trunk, unspecified[accessedResource: ICD9:171.7][accessDate: 10-05-2010]
Malignant Tumor of the Soft Tissue
MAL NEO SOFT TIS PELVIS[accessedResource: ICD9:171.6][accessDate: 10-05-2010]
Malignant neoplasm of soft tissue (disorder)[accessedResource: SNOMEDCT:269469005][accessDate: 10-05-2010]
SNOMEDCT:189764008
Soft tissue tumour, malignant[accessedResource: SNOMEDCT:2424003][accessDate: 10-05-2010]
Malignant neoplasm of soft tissue[accessedResource: SNOMEDCT:269469005][accessDate: 10-05-2010]
ICD9:171.0
Malignant mesenchymal tumor[accessedResource: SNOMEDCT:2424003][accessDate: 10-05-2010]
MAL NEO SOFT TISSUE ARM[accessedResource: ICD9:171.2][accessDate: 10-05-2010]
GeneRIF:12610779
MAL NEO SOFT TIS ABDOMEN[accessedResource: ICD9:171.5][accessDate: 10-05-2010]
Sarcoma of Soft Tissue and Bone
Malignant Soft Tissue Neoplasm[accessedResource: NCIt:C4867][accessDate: 10-05-2010]
ICD9:171.5
DOID:1115
Soft tissue tumour, malignant
Malignant neoplasm of connective and other soft tissue of head, face, and neck[accessedResource: ICD9:171.0][accessDate: 10-05-2010]
Malignant Soft Tissue Neoplasm
Sarcoma of Soft Tissue
Malignant neoplasm of connective and other soft tissue, site unspecified[accessedResource: ICD9:171.9][accessDate: 10-05-2010]
MAL NEOPL TRUNK NOS
[M]Sarcoma NOS
Malignant neoplasm of connective and other soft tissue of upper limb, including shoulder
GeneRIF:16154137
Malignant tumour of soft tissue[accessedResource: SNOMEDCT:269469005][accessDate: 10-05-2010]
Malignant neoplasm of other specified sites of connective and other soft tissue[accessedResource: ICD9:171.8][accessDate: 10-05-2010]
MAL NEO SOFT TISSUE LEG
Sarcoma of the Soft Tissue and Bone
A usually aggressive malignant mesenchymal cell tumor most commonly arising from muscle, fat, fibrous tissue, bone, cartilage, and blood vessels. Sarcomas occur in both children and adults. The prognosis depends largely on the degree of differentiation (grade) of the tumor. Representative subtypes are liposarcoma, leiomyosarcoma, osteosarcoma, and chondrosarcoma.[accessedResource: NCIt:C9118][accessDate: 10-05-2010]
GeneRIF:15018431
Malignant neoplasm of connective and other soft tissue, site unspecified
A usually aggressive malignant mesenchymal cell tumor most commonly arising from muscle, fat, fibrous tissue, bone, cartilage, and blood vessels. Sarcomas occur in both children and adults. The prognosis depends largely on the degree of differentiation (grade) of the tumor. Representative subtypes are liposarcoma, leiomyosarcoma, osteosarcoma, and chondrosarcoma.
Malignant neoplasm of connective and other soft tissue of thorax[accessedResource: ICD9:171.4][accessDate: 10-05-2010]
Sarcoma of the Soft Tissue and Bone[accessedResource: NCIt:C9118][accessDate: 10-05-2010]
connective and soft tissue neoplasm[accessedResource: DOID:1115][accessDate: 10-05-2010]
GeneRIF:11953898
Sarcoma of Soft Tissue[accessedResource: NCIt:C9306][accessDate: 10-05-2010]
Malignant neoplasm of connective and other soft tissue of trunk, unspecified
MAL NEO SOFT TISSUE NEC
Malignant Neoplasm of the Soft Tissue[accessedResource: NCIt:C4867][accessDate: 10-05-2010]
MAL NEO SOFT TISSUE LEG[accessedResource: ICD9:171.3][accessDate: 10-05-2010]
Malignant neoplasm of other specified sites of connective and other soft tissue
ICD9:171.9
Malignant neoplasm of connective and other soft tissue (disorder)[accessedResource: SNOMEDCT:187985009][accessDate: 10-05-2010]
Sarcoma of Soft Tissue and Bone[accessedResource: NCIt:C9118][accessDate: 10-05-2010]
A malignant mesenchymal neoplasm arising from muscle tissue, adipose tissue, blood vessels, fibrous tissue, or other supportive tissues excluding the bones.[accessedResource: NCIt:C9306][accessDate: 10-05-2010]
A cancer that affects connective tissue resulting in mesoderm proliferation.[accessedResource: DOID:1115][accessDate: 10-05-2010]
GeneRIF:15201968
ICD9:171.2
Malignant neoplasm of connective and other soft tissue of abdomen
tumor of soft tissue and skeleton[accessedResource: DOID:1115][accessDate: 10-05-2010]
Sarcoma, no ICD-O subtype[accessedResource: SNOMEDCT:2424003][accessDate: 10-05-2010]
ICD9:171
Malignant neoplasm of connective and other soft tissue
Sarcoma of the Soft Tissue
MAL NEO SOFT TIS PELVIS
GeneRIF:16327442
GeneRIF:15710230
Malignant neoplasm of soft tissue (disorder)
Malignant neoplasm of connective and other soft tissue of abdomen[accessedResource: ICD9:171.5][accessDate: 10-05-2010]
GeneRIF:15716602
MAL NEO SOFT TISSUE NOS
[M]Sarcoma NOS (morphologic abnormality)
ICD9:171.4
NCIt:C4867
[M]Sarcoma NOS[accessedResource: SNOMEDCT:189764008][accessDate: 10-05-2010]
Malignant neoplasm of connective and other soft tissue of lower limb, including hip[accessedResource: ICD9:171.3][accessDate: 10-05-2010]
A malignant mesenchymal neoplasm arising exclusively from the soft tissues. Representative examples include soft tissue sarcoma, extraosseous Ewing sarcoma/peripheral primitive neuroectodermal tumor, and malignant hemangiopericytoma.
Soft Tissue Sarcoma
Connective Tissue Sarcoma[accessedResource: NCIt:C9306][accessDate: 10-05-2010]
Sarcoma, no ICD-O subtype (morphologic abnormality)
GeneRIF:14710346
Sarcoma, NOS[accessedResource: SNOMEDCT:2424003][accessDate: 10-05-2010]
[M]Sarcoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189764008][accessDate: 10-05-2010]
NCIt:C9118
Malignant neoplasm of connective and other soft tissue (disorder)
Sarcoma, NOS
Malignant neoplasm of connective and other soft tissue of pelvis[accessedResource: ICD9:171.6][accessDate: 10-05-2010]
Sarcoma, no ICD-O subtype
Soft Tissue Sarcoma[accessedResource: NCIt:C9306][accessDate: 10-05-2010]
MAL NEO SOFT TIS ABDOMEN
tumor of soft tissue and skeleton
SNOMEDCT:2424003
sarcoma
ICD9:171.3
http://www.arabidopsis.org/servlets/TairObject?id=1005158767&type=germplasm
CS57743 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158767&type=germplasm
CS57743
James Malone
NCIH322
James Malone
Ele Holloway
IDOMAL:0000321
A developmental stage of the Plasmodium life cycle found within the erythrocyte, called such because of the shape observed.
A developmental stage of the Plasmodium life cycle found within the erythrocyte, called such because of the shape observed.[accessedResource: IDOMAL:0000321][accessDate: 10-05-2010]
ring stage trophozoite
Tomasz Adamusiak
Jie Zheng
beta-Estradiol
http://www.ebi.ac.uk/efo/EFO_0001468
[H][C@]12CC[C@]3(C)[C@@H](O)CC[C@@]3([H])[C@]1([H])CCc1cc(O)ccc21
Estradiol
The 17beta-isomer of estradiol.
InChI=1/C18H24O2/c1-18-9-8-14-13-5-3-12(19)10-11(13)2-4-15(14)16(18)6-7-17(18)20/h3,5,10,14-17,19-20H,2,4,6-9H2,1H3/t14-,15-,16+,17+,18+/m1/s1
C18H24O2
17beta-estradiol
An estradiol that has formula C18H24O2.
17beta-oestradiol
estra-1,3,5(10)-triene-3,17beta-diol
CHEBI:16469
17beta-estra-1,3,5(10)-triene-3,17-diol
cis-estradiol
InChIKey=VOXZDWNPVJITMN-ZBRFXRBCBJ
true
Loss of imprinting occurs in some tumour cells
Epigenetic status describes the imprinting state of a sample. E.g. Loss of imprinting occurs in some tumour cells
epigenetic status
true
UO:0000061
http://www.ebi.ac.uk/efo/EFO_0001804
A unit of molarity is a derived concentration unit which is a standard measure of the number of moles of a given substance per liter of solution.
A derived concentration unit which is a standard measure of the number of moles of a given substance per liter of solution.
unit of molarity
James Malone
NCIt:C33250
FMA:9610
Faucial tonsil
Faucial tonsil[accessedResource: FMA:9610][accessDate: 10-05-2010]
palatine tonsil
James Malone
A biological sex quality inhering in an individual or a population that only produces gametes that can be fertilised by male gametes.[accessedResource: PATO:0000383][accessDate: 10-05-2010]
CARO:0000028
A biological sex quality inhering in an individual or a population that only produces gametes that can be fertilised by male gametes.
James Malone
female
Tomasz Adamusiak
PATO:0000383
MO_506
Jie Zheng
An assay where chromatin immunoprecipitation (ChIP) is used in combination with tiling microarray technology
ChIP-chip by tiling array
MT3
Ele Holloway
James Malone
SS[accessedResource: NCIt:C3400][accessDate: 10-05-2010]
SNOMEDCT:63211008
GeneRIF:16158422
Synovial sarcoma, NOS[accessedResource: SNOMEDCT:63211008][accessDate: 10-05-2010]
James Malone
GeneRIF:14507652
SNOMEDCT:302851001
GeneRIF:11733362
NCIt:C3400
DOID:5485
GeneRIF:12037676
GeneRIF:16029077
SS
Synovial sarcoma (morphologic abnormality)
[M]Synovioma NOS
[M]Synovial sarcoma NOS
Synovial sarcoma (disorder)[accessedResource: DOID:5485][accessDate: 10-05-2010]
Synovioma, NOS
A malignant neoplasm characterized by the chromosomal translocation t(X;18)(p11;q11). It can occur at any age, but mainly affects young adults, more commonly males. Although any site can be affected, the vast majority of the cases arise in the deep soft tissues of extremities, especially around the knee. Microscopically, synovial sarcoma is classified as monophasic (with a spindle or epithelial cell component) or biphasic (with both spindle and epithelial cell components). Synovial sarcomas can recur or metastasize to the lungs, bones, and lymph nodes.[accessedResource: NCIt:C3400][accessDate: 10-05-2010]
[M]Synovial sarcoma NOS[accessedResource: SNOMEDCT:63211008][accessDate: 10-05-2010]
Sarcomas, Synovial
Sarcomas, Synovial[accessedResource: MSH:D013584][accessDate: 10-05-2010]
GeneRIF:11895494
Synovial sarcoma, NOS
A malignant neoplasm arising from tenosynovial tissue of the joints and in synovial cells of tendons and bursae. The legs are the most common site, but the tumor can occur in the abdominal wall and other trunk muscles. There are two recognized types: the monophasic (characterized by sheaths of monotonous spindle cells) and the biphasic (characterized by slit-like spaces or clefts within the tumor, lined by cuboidal or tall columnar epithelial cells). These sarcomas occur most commonly in the second and fourth decades of life. (From Dorland, 27th ed; DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p1363)
Synoviomas
[M]Synovioma NOS[accessedResource: SNOMEDCT:63211008][accessDate: 10-05-2010]
Synovial sarcoma (morphologic abnormality)[accessedResource: DOID:5485][accessDate: 10-05-2010]
GeneRIF:14871970
GeneRIF:15467754
GeneRIF:15069540
Synovioma, NOS[accessedResource: SNOMEDCT:63211008][accessDate: 10-05-2010]
Synovioma, malignant[accessedResource: SNOMEDCT:63211008][accessDate: 10-05-2010]
GeneRIF:12874758
Synoviomas[accessedResource: MSH:D013584][accessDate: 10-05-2010]
synovial sarcoma
MSH:D013584
Synovioma, malignant
Synovial sarcoma (disorder)
GeneRIF:15735574
Synovioma[accessedResource: SNOMEDCT:63211008][accessDate: 10-05-2010]
GeneRIF:12696068
A malignant neoplasm characterized by the chromosomal translocation t(X;18)(p11;q11). It can occur at any age, but mainly affects young adults, more commonly males. Although any site can be affected, the vast majority of the cases arise in the deep soft tissues of extremities, especially around the knee. Microscopically, synovial sarcoma is classified as monophasic (with a spindle or epithelial cell component) or biphasic (with both spindle and epithelial cell components). Synovial sarcomas can recur or metastasize to the lungs, bones, and lymph nodes.
A malignant neoplasm arising from tenosynovial tissue of the joints and in synovial cells of tendons and bursae. The legs are the most common site, but the tumor can occur in the abdominal wall and other trunk muscles. There are two recognized types: the monophasic (characterized by sheaths of monotonous spindle cells) and the biphasic (characterized by slit-like spaces or clefts within the tumor, lined by cuboidal or tall columnar epithelial cells). These sarcomas occur most commonly in the second and fourth decades of life. (From Dorland, 27th ed; DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p1363)[accessedResource: MSH:D013584][accessDate: 10-05-2010]
Synovioma
GM12760
James Malone
SEM
James Malone
Ele Holloway
The tube through which urine leaves the body. It empties urine from the bladder.[accessedResource: BTO:0001426][accessDate: 10-05-2010]
Organ with organ cavity which connects the cavity of the urinary bladder to the exterior. Examples: There is only one urethra.[accessedResource: FMAID:19667][accessDate: 10-05-2010]
James Malone
EMAPA:18692
MAT:0000121
WBbt:0005777
Organ with organ cavity which connects the cavity of the urinary bladder to the exterior. Examples: There is only one urethra.
The tube through which urine leaves the body. It empties urine from the bladder.
urethra
FMAID:19667
excretory duct
MA:0000379
excretory duct[accessedResource: MAT:0000121][accessDate: 10-05-2010]
EV:0100099
XAO:0000153
BTO:0001426
James Malone
(2-(4-Hydroxyphenyl)-6-hydroxybenzo(b)thien-3-yl)(4-(2-(1-piperidinyl)ethoxy)phenyl)methanone
[6-hydroxy-2-(4-hydroxyphenyl)-1-benzothien-3-yl][4-(2-piperidin-1-ylethoxy)phenyl]methanone
C28H27NO4S
Oc1ccc(cc1)-c2sc3cc(O)ccc3c2C(=O)c4ccc(OCCN5CCCCC5)cc4
A benzothiophene that has formula C28H27NO4S.
raloxifenum
raloxifene
LY 139481
InChIKey=GZUITABIAKMVPG-UHFFFAOYAG
raloxifeno
http://www.ebi.ac.uk/efo/EFO_0001601
CHEBI:8772
InChI=1/C28H27NO4S/c30-21-8-4-20(5-9-21)28-26(24-13-10-22(31)18-25(24)34-28)27(32)19-6-11-23(12-7-19)33-17-16-29-14-2-1-3-15-29/h4-13,18,30-31H,1-3,14-17H2
Natural Language Generator 8th April 2010
A BT20 is a cell line.
A BT20 is all of the following: something that is bearer of a breast carcinoma, something that derives from a homo sapiens, and something that derives from an epithelial cell.
James Malone
BT20
GM12761
James Malone
Carcinoma of the Urinary Bladder[accessedResource: NCIt:C4912][accessDate: 10-05-2010]
GeneRIF:11749692
Bladder carcinoma is a carcinoma arising from the bladder epithelium. Approximately 90% of the bladder carcinomas are transitional cell carcinomas. The remainder are squamous cell carcinomas, adenocarcinomas and small cell neuroendocrine carcinomas.
Cancer of Urinary Bladder
James Malone
GeneRIF:15386310
NCIt:C4912
Bladder Cancer
Urinary Bladder Cancer
Urinary Bladder Carcinoma
GeneRIF:15032076
Cancer of Bladder
Carcinoma of bladder (disorder)[accessedResource: SNOMEDCT:255108000][accessDate: 10-05-2010]
A carcinoma arising from the bladder epithelium. Approximately 90% of the bladder carcinomas are transitional cell carcinomas. The remainder are squamous cell carcinomas, adenocarcinomas and small cell neuroendocrine carcinomas.
Cancer of Bladder[accessedResource: NCIt:C4912][accessDate: 10-05-2010]
Cancer of Urinary Bladder[accessedResource: NCIt:C4912][accessDate: 10-05-2010]
Urinary Bladder Carcinoma[accessedResource: NCIt:C4912][accessDate: 10-05-2010]
GeneRIF:12594814
Carcinoma of the Bladder
GeneRIF:16061860
GeneRIF:15734831
GeneRIF:15942628
Cancer of the Bladder[accessedResource: NCIt:C4912][accessDate: 10-05-2010]
GeneRIF:12492368
A carcinoma that forms in tissues of the bladder.
GeneRIF:12820373
Cancer of the Urinary Bladder
carcinoma of urinary bladder[accessedResource: DOID:4007][accessDate: 10-05-2010]
Carcinoma of the Bladder[accessedResource: NCIt:C4912][accessDate: 10-05-2010]
Cancer of the Urinary Bladder[accessedResource: NCIt:C4912][accessDate: 10-05-2010]
GeneRIF:15516981
Bladder Cancer[accessedResource: NCIt:C4912][accessDate: 10-05-2010]
Carcinoma of bladder
GeneRIF:15140401
GeneRIF:15599595
Carcinoma of Bladder[accessedResource: NCIt:C4912][accessDate: 10-05-2010]
A carcinoma that forms in tissues of the bladder.[accessedResource: DOID:4007][accessDate: 10-05-2010]
Urinary Bladder Cancer[accessedResource: NCIt:C4912][accessDate: 10-05-2010]
A carcinoma arising from the bladder epithelium. Approximately 90% of the bladder carcinomas are transitional cell carcinomas. The remainder are squamous cell carcinomas, adenocarcinomas and small cell neuroendocrine carcinomas.[accessedResource: NCIt:C4912][accessDate: 10-05-2010]
bladder carcinoma
SNOMEDCT:255108000
Cancer of the Bladder
DOID:4007
GeneRIF:16215315
GeneRIF:15361851
GeneRIF:12488298
Carcinoma of Urinary Bladder
carcinoma of bladder (disorder)
GeneRIF:12225859
GeneRIF:14654522
Carcinoma of the Urinary Bladder
Pediatric Renal Clear Cell Sarcoma[accessedResource: NCIt:C4264][accessDate: 10-05-2010]
Childhood Clear Cell Sarcoma of the Kidney[accessedResource: NCIt:C4264][accessDate: 10-05-2010]
CCSK
clear cell renal cell carcinoma
James Malone
Pediatric Kidney Clear Cell Sarcoma
Clear cell sarcoma of kidney (morphologic abnormality)
clear cell sarcoma of the kidney
Clear Cell Sarcoma of Kidney
Childhood Renal Clear Cell Sarcoma
[M] Clear cell sarcoma of kidney[accessedResource: SNOMEDCT:189813000][accessDate: 10-05-2010]
[M] Clear cell sarcoma of kidney
Pediatric Renal Clear Cell Sarcoma
DOID:4880
Childhood Kidney Clear Cell Sarcoma
Childhood Clear Cell Sarcoma of the Kidney
SNOMEDCT:24007003
Clear cell sarcoma of kidney[accessedResource: SNOMEDCT:24007003][accessDate: 10-05-2010]
Renal Clear Cell Sarcoma[accessedResource: NCIt:C4264][accessDate: 10-05-2010]
Kidney Clear Cell Sarcoma
A rare pediatric sarcoma affecting the kidney. It is characterized by the presence of epithelioid or spindle cells forming cords or nests, separated by fibrovascular septa. This type of sarcoma frequently metastasizes to the bones.
Childhood Kidney Clear Cell Sarcoma[accessedResource: NCIt:C4264][accessDate: 10-05-2010]
A clear cell sarcoma that can spread from the kidney to other organs.[accessedResource: DOID:4880][accessDate: 10-05-2010]
A clear cell sarcoma that can spread from the kidney to other organs.
[M] Clear cell sarcoma of kidney (morphologic abnormality)[accessedResource: SNOMEDCT:189813000][accessDate: 10-05-2010]
Kidney Clear Cell Sarcoma[accessedResource: NCIt:C4264][accessDate: 10-05-2010]
[M] Clear cell sarcoma of kidney (morphologic abnormality)
Pediatric Kidney Clear Cell Sarcoma[accessedResource: NCIt:C4264][accessDate: 10-05-2010]
Childhood Renal Clear Cell Sarcoma[accessedResource: NCIt:C4264][accessDate: 10-05-2010]
NCIt:C4264
SNOMEDCT:189813000
Renal Clear cell sarcoma
A rare pediatric sarcoma affecting the kidney. It is characterized by the presence of epithelioid or spindle cells forming cords or nests, separated by fibrovascular septa. This type of sarcoma frequently metastasizes to the bones.[accessedResource: NCIt:C4264][accessDate: 10-05-2010]
Clear cell sarcoma of kidney (morphologic abnormality)[accessedResource: DOID:4880][accessDate: 10-05-2010]
CCSK[accessedResource: NCIt:C4264][accessDate: 10-05-2010]
NCIH1618
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158743&type=germplasm
CS57719 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158743&type=germplasm
CS57719
James Malone
GeneRIF:12161822
GeneRIF:11840509
Disorder, Manic
GeneRIF:12192619
GeneRIF:15450783
Manic-Depression[accessedResource: NCIt:C34423][accessDate: 10-05-2010]
GeneRIF:12815743
Unspecified bipolar affective disorder, NOS[accessedResource: SNOMEDCT:191654006][accessDate: 10-05-2010]
GeneRIF:12082561
GeneRIF:14531760
GeneRIF:12496953
GeneRIF:15539862
Bipolar disorder (disorder)
A major affective disorder marked by severe mood swings (manic or major depressive episodes) and a tendency to remission and recurrence.[accessedResource: MSH:D001714][accessDate: 10-05-2010]
James Malone
GeneRIF:15940297
GeneRIF:14604453
Manic-depressive psychosis[accessedResource: SNOMEDCT:13746004][accessDate: 10-05-2010]
Manic-depressive psychosis
GeneRIF:16044170
GeneRIF:14966479
Psychosis, Bipolar Affective
GeneRIF:16168956
MDI - Manic-depressive illness
GeneRIF:15257153
Manic Depressive Disorder
GeneRIF:14985387
Bipolar disorder, NOS
Manic Disorder[accessedResource: MSH:D001714][accessDate: 10-05-2010]
Psychosis, Bipolar Affective[accessedResource: MSH:D001714][accessDate: 10-05-2010]
Unspecified bipolar affective disorder (disorder)[accessedResource: SNOMEDCT:191646009][accessDate: 10-05-2010]
GeneRIF:15917720
GeneRIF:12951196
GeneRIF:11840505
Psychoses, Manic-Depressive
State, Manic
Bipolar Disorders[accessedResource: MSH:D001714][accessDate: 10-05-2010]
Mania[accessedResource: MSH:D001714][accessDate: 10-05-2010]
Manic States[accessedResource: MSH:D001714][accessDate: 10-05-2010]
GeneRIF:12097806
MSH:D001714
MANIC DEPRESSIVE ILLNESS[accessedResource: DOID:3312][accessDate: 10-05-2010]
A major affective disorder marked by severe mood swings (manic or major depressive episodes) and a tendency to remission and recurrence.
Unspecified bipolar affective disorder, unspecified
GeneRIF:15909293
GeneRIF:15660667
Unspecified bipolar affective disorder, unspecified (disorder)[accessedResource: SNOMEDCT:191647000][accessDate: 10-05-2010]
A major affective disorder marked by severe mood swings (manic or major depressive episodes) and a tendency to remission and recurrence (MeSH).[accessedResource: NIFSTD:birnlex_12754][accessDate: 10-05-2010]
[X]Bipolar affective disorder, unspecified (disorder)[accessedResource: SNOMEDCT:192365005][accessDate: 10-05-2010]
GeneRIF:15820318
GeneRIF:11901356
GeneRIF:11930170
Manic-depressive syndrome NOS
GeneRIF:11702051
GeneRIF:12610658
Manic Disorders
Unspecified bipolar affective disorder[accessedResource: SNOMEDCT:191646009][accessDate: 10-05-2010]
SNOMEDCT:13746004
Bipolar disorder (disorder)[accessedResource: DOID:3312][accessDate: 10-05-2010]
Unspecified bipolar affective disorder, NOS (disorder)
GeneRIF:15983625
States, Manic
MANIC DIS[accessedResource: MSH:D001714][accessDate: 10-05-2010]
DOID:3312
SNOMEDCT:191654006
GeneRIF:14699425
Psychoses, Bipolar Affective
Manic Depressive disorder[accessedResource: DOID:3312][accessDate: 10-05-2010]
BIPOLAR DIS[accessedResource: MSH:D001714][accessDate: 10-05-2010]
Mania
GeneRIF:15806582
Depressive-manic psych.
GeneRIF:12782961
GeneRIF:15799788
Unspecified bipolar affective disorder, NOS
Depressive-manic psych.[accessedResource: DOID:3312][accessDate: 10-05-2010]
Manic-Depressive Psychoses[accessedResource: MSH:D001714][accessDate: 10-05-2010]
Unspecified bipolar affective disorder
GeneRIF:12498692
GeneRIF:12664313
Psychoses, Bipolar Affective[accessedResource: MSH:D001714][accessDate: 10-05-2010]
GeneRIF:15452587
GeneRIF:15622415
Manic-Depression
ICD9:296.80
GeneRIF:16044173
NIFSTD:birnlex_12754
bipolar disorder
Manic-depressive syndrome NOS[accessedResource: DOID:3312][accessDate: 10-05-2010]
BIPOLAR DISORDER NOS[accessedResource: ICD9:296.80][accessDate: 10-05-2010]
GeneRIF:12232779
Bipolar disorder, unspecified[accessedResource: ICD9:296.80][accessDate: 10-05-2010]
GeneRIF:14678452
GeneRIF:12949534
GeneRIF:15167705
MANIC DEPRESSIVE ILLNESS
MDI - Manic-depressive illness[accessedResource: SNOMEDCT:13746004][accessDate: 10-05-2010]
SNOMEDCT:192365005
GeneRIF:15050861
GeneRIF:15211633
Manic State[accessedResource: MSH:D001714][accessDate: 10-05-2010]
GeneRIF:15111989
GeneRIF:12555230
GeneRIF:15576061
GeneRIF:12565145
GeneRIF:14743183
A major affective disorder marked by severe mood swings (manic or major depressive episodes) and a tendency to remission and recurrence (MeSH).
GeneRIF:14729229
Bipolar Disorders
Unspecified bipolar affective disorder, unspecified (disorder)
Unspecified bipolar affective disorder, unspecified[accessedResource: SNOMEDCT:191647000][accessDate: 10-05-2010]
Manias
Unspecified bipolar affective disorder (disorder)
Bipolar disorder, unspecified
[X]Bipolar affective disorder, unspecified[accessedResource: SNOMEDCT:192365005][accessDate: 10-05-2010]
Tomasz Adamusiak
GeneRIF:15261714
[X]Bipolar affective disorder, unspecified
GeneRIF:15630410
GeneRIF:12111480
Manic Disorders[accessedResource: MSH:D001714][accessDate: 10-05-2010]
GeneRIF:12565915
SNOMEDCT:191646009
[X]Bipolar affective disorder, unspecified (disorder)
GeneRIF:12808434
BIPOLAR DIS
MANIC DIS
GeneRIF:15824745
GeneRIF:15838535
Depression, Bipolar[accessedResource: MSH:D001714][accessDate: 10-05-2010]
GeneRIF:12140781
SNOMEDCT:191647000
NCIt:C34423
GeneRIF:15885920
GeneRIF:14967554
GeneRIF:14729237
GeneRIF:15737668
Bipolar Depression
Unspecified bipolar affective disorder, NOS (disorder)[accessedResource: DOID:3312][accessDate: 10-05-2010]
Manias[accessedResource: MSH:D001714][accessDate: 10-05-2010]
GeneRIF:14582141
GeneRIF:12647258
Nucleus of brain which is located medially to the putamen and laterally to the internal capsule.
pallidum[accessedResource: NIFSTD:birnlex_1234][accessDate: 10-05-2010]
The smaller and more medial part of the lentiform nucleus of the brain, separated from the putamen by the lateral medullary lamina. In official anatomic nomenclature, it is divided by the medial medullary lamina into two parts, lateral and medial, both of which have extensive connections with the corpus striatum, thalamus, and mesencephalon.[accessedResource: BTO:0002246][accessDate: 10-05-2010]
BTO:0002246
EV:0100188
The smaller and more medial part of the lentiform nucleus of the brain, separated from the putamen by the lateral medullary lamina. In official anatomic nomenclature, it is divided by the medial medullary lamina into two parts, lateral and medial, both of which have extensive connections with the corpus striatum, thalamus, and mesencephalon.
FMAID:61835
Pale Body
Paleostriatum
James Malone
pallidum
Pale Body[accessedResource: NIFSTD:birnlex_1234][accessDate: 10-05-2010]
NIFSTD:birnlex_1234
Tomasz Adamusiak
MA:0000890
Nucleus of brain which is located medially to the putamen and laterally to the internal capsule.[accessedResource: FMAID:61835][accessDate: 10-05-2010]
MAT:0000510
globus pallidus
Paleostriatum[accessedResource: FMAID:61835][accessDate: 10-05-2010]
SUDHL6
James Malone
Ele Holloway
obsolete - synonym with experiment type
true
experimental design refers to both observational and experimental (perturbational) studies. The organizing principles of the study including the relationships between assays and the steps taken to interpret the data.
obsolete_experimental design
PC-10
James Malone
Ele Holloway
Y79
James Malone
Ele Holloway
ArrayExpress production team
Antibody profiling experiment
An assay where proteins in a sample are detected, quantified or otherwise analysed, e.g. antibody profiling
proteomic profiling
James Malone
Abdomen Skin
James Malone
The skin or integument surrounding the abdomen.[accessedResource: NCIt:C52758][accessDate: 10-05-2010]
NCIt:C52758
abdominal skin
The skin or integument surrounding the abdomen.
Abdomen Skin[accessedResource: NCIt:C52758][accessDate: 10-05-2010]
NCIt:C33064
Medial Collateral Ligament of the Knee
medial collateral ligament
James Malone
DOID:7320
ovarian serous cystadenofibroma
serous cystadenofibroma
James Malone
Ele Holloway
KATOIII
James Malone
Ele Holloway
James Malone
SUM190PT
Hutchinson Gilford Syndrome
DOID:3911
Hutchinson-Gilford syndrome[accessedResource: SNOMEDCT:238870004][accessDate: 10-05-2010]
James Malone
GeneRIF:15608054
Hutchinson-Gilford Progeria syndrome[accessedResource: DOID:3911][accessDate: 10-05-2010]
Hutchinson-Gilford Disease
Hutchinson-Gilford syndrome (disorder)[accessedResource: DOID:3911][accessDate: 10-05-2010]
progeria syndrome
Progeria (disorder)[accessedResource: DOID:3911][accessDate: 10-05-2010]
HGPS
MSH:D011371
GeneRIF:12714972
GeneRIF:12702809
Progeria
A very rare genetic disorder caused by mutations in the LMNA gene. It is characterized by premature aging. Signs and symptoms include failure to thrive, limited growth, alopecia, wrinkled skin, small face, development of atherosclerosis, and heart disease. There is no cure for this condition. Individuals do not usually survive beyond their early twenties. Death usually occurs as a result of complications from atherosclerosis.
Progeria[accessedResource: SNOMEDCT:238870004][accessDate: 10-05-2010]
Hutchinson-Gilford syndrome (disorder)
A very rare genetic disorder caused by mutations in the LMNA gene. It is characterized by premature aging. Signs and symptoms include failure to thrive, limited growth, alopecia, wrinkled skin, small face, development of atherosclerosis, and heart disease. There is no cure for this condition. Individuals do not usually survive beyond their early twenties. Death usually occurs as a result of complications from atherosclerosis.[accessedResource: NCIt:C34951][accessDate: 10-05-2010]
Progeria (disorder)
An abnormal congenital condition, associated with defects in the LAMIN TYPE A gene, which is characterized by premature aging in children, where all the changes of cell senescence occur. It is manifested by premature greying; hair loss; hearing loss (DEAFNESS); cataracts (CATARACT); ARTHRITIS; OSTEOPOROSIS; DIABETES MELLITUS; atrophy of subcutaneous fat; skeletal hypoplasia; elevated urinary HYALURONIC ACID; and accelerated ATHEROSCLEROSIS. Many affected individuals develop malignant tumors, especially SARCOMA.
Progeria syndrome (disorder) [Ambiguous]
GeneRIF:12768443
SNOMEDCT:238870004
Premature senility syndrome
Hutchinson-Gilford Progeria syndrome
Premature Senility Syndrome[accessedResource: NCIt:C34951][accessDate: 10-05-2010]
Progeria syndrome (disorder) [Ambiguous][accessedResource: DOID:3911][accessDate: 10-05-2010]
NCIt:C34951
Hutchinson-Gilford Disease[accessedResource: NCIt:C34951][accessDate: 10-05-2010]
GeneRIF:15342704
GeneRIF:12735900
HGPS[accessedResource: DOID:3911][accessDate: 10-05-2010]
An abnormal congenital condition, associated with defects in the LAMIN TYPE A gene, which is characterized by premature aging in children, where all the changes of cell senescence occur. It is manifested by premature greying; hair loss; hearing loss (DEAFNESS); cataracts (CATARACT); ARTHRITIS; OSTEOPOROSIS; DIABETES MELLITUS; atrophy of subcutaneous fat; skeletal hypoplasia; elevated urinary HYALURONIC ACID; and accelerated ATHEROSCLEROSIS. Many affected individuals develop malignant tumors, especially SARCOMA.[accessedResource: MSH:D011371][accessDate: 10-05-2010]
http://www.arabidopsis.org/servlets/TairObject?id=1005158859&type=germplasm
CS57835 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158859&type=germplasm
CS57835
James Malone
http://www.arabidopsis.org/servlets/TairObject?type=germplasm&id=1005152522
CS57521 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=germplasm&id=1005152522
CS57521
James Malone
MSH:D018279
signet ring cell carcinoma
Signet ring cell carcinoma (morphologic abnormality)[accessedResource: DOID:3493][accessDate: 10-05-2010]
NCIt:C3774
Signet ring cell adenocarcinoma[accessedResource: SNOMEDCT:87737001][accessDate: 10-05-2010]
[M]Signet ring carcinoma NOS (morphologic abnormality)
A usually aggressive, poorly differentiated invasive adenocarcinoma characterized by the presence of malignant glandular cells in which the nucleus is pressed to one side by the presence of intracytoplasmic mucus. It may arise from the stomach, small and large intestine, ampulla of Vater, appendix, gallbladder, pancreas, lung, bladder, breast, and prostate gland.
Signet ring carcinoma NOS (morphologic abnormality)
A usually aggressive, poorly differentiated invasive adenocarcinoma characterized by the presence of malignant glandular cells in which the nucleus is pressed to one side by the presence of intracytoplasmic mucus. It may arise from the stomach, small and large intestine, ampulla of Vater, appendix, gallbladder, pancreas, lung, bladder, breast, and prostate gland.[accessedResource: NCIt:C3774][accessDate: 10-05-2010]
Signet ring carcinoma NOS (morphologic abnormality)[accessedResource: DOID:3493][accessDate: 10-05-2010]
A poorly differentiated adenocarcinoma in which the nucleus is pressed to one side by a cytoplasmic droplet of mucus. It usually arises in the gastrointestinal system.
GeneRIF:11788899
James Malone
[M]Signet ring carcinoma NOS
DOID:3493
[M]Signet ring carcinoma NOS[accessedResource: SNOMEDCT:189702009][accessDate: 10-05-2010]
Signet Ring Cell Adenocarcinoma
[M]Signet ring carcinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189702009][accessDate: 10-05-2010]
A poorly differentiated adenocarcinoma in which the nucleus is pressed to one side by a cytoplasmic droplet of mucus. It usually arises in the gastrointestinal system.[accessedResource: MSH:D018279][accessDate: 10-05-2010]
Signet ring carcinoma
Signet ring carcinoma[accessedResource: SNOMEDCT:87737001][accessDate: 10-05-2010]
SNOMEDCT:87737001
SNOMEDCT:189702009
Signet ring cell carcinoma (morphologic abnormality)
A microgram is a mass unit which is equal to 1 gram x 10^-6
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001707
true
microgram
James Malone
ug
Jie Zheng
A mass unit which is equal to one millionth of a gram or 10^[-6] g.
MO_438
µg
autopod
The generic name for hand, paw, foot etc[accessedResource: MAT:0000091][accessDate: 10-05-2010]
foot[accessedResource: MAT:0000091][accessDate: 10-05-2010]
MA:0002714
paw
The generic name for hand, paw, foot etc
hand[accessedResource: MAT:0000091][accessDate: 10-05-2010]
EV:0100452
Tomasz Adamusiak
MAT:0000091
paw[accessedResource: MAT:0000091][accessDate: 10-05-2010]
SAEL:45
hand
James Malone
SAEL:41
foot
NIFSTD:nlx_anat_20090603
Skin of body[accessedResource: FMAID:7163][accessDate: 10-05-2010]
FMAID:7163
BTO:0001253
EV:0100152
Nonparenchymatous organ that consists of the epidermis, dermis and sets of hair and nails and which surrounds the entire body. Subdivisions of the skin surround various body parts; as a whole, the skin constitutes the external layer of the body. Examples: There is only one skin.[accessedResource: FMAID:7163][accessDate: 10-05-2010]
MFO:0003200
The integument of an animal (as a fur-bearing mammal or a bird) separated from the body usually with its hair or feathers.
MAT:0000284
XAO:0000023
Nonparenchymatous organ that consists of the epidermis, dermis and sets of hair and nails and which surrounds the entire body. Subdivisions of the skin surround various body parts; as a whole, the skin constitutes the external layer of the body. Examples: There is only one skin.
SAEL:95
EHDAA:6530
Skin of body
skin
EMAPA:17525
The integument of an animal (as a fur-bearing mammal or a bird) separated from the body usually with its hair or feathers.[accessedResource: BTO:0001253][accessDate: 10-05-2010]
James Malone
corpus cardiacum
FBbt:00005799
BTO:0000432
corpora cardiaca[accessedResource: BTO:0000432][accessDate: 10-05-2010]
James Malone
A pair of neurohemal organs located on the walls of the aorta just behind the brain. The corpora cardiaca release their store of PTTH only after they receive a signal from neurosecretory cells in the brain.
A pair of neurohemal organs located on the walls of the aorta just behind the brain. The corpora cardiaca release their store of PTTH only after they receive a signal from neurosecretory cells in the brain.[accessedResource: BTO:0000432][accessDate: 10-05-2010]
corpora cardiaca
MO_364
A process in which a reporter that could be hybridized to an exogenously added nucleic acid or protein (spike) before or during hybridization is used as a control for data processing.
control spike calibration
James Malone
ZFS:0000041
larval day 21-29
James Malone
NIFSTD:birnlex_1031
Multi-tissue structure that is the ventral part of the midbrain and develops from the basal plate. The tegmentum is bordered rostrally by the synencephalon, dorsal thalamus and posterior tuberculum, ventrally by the hypothalamus, and dorsolaterally by the torus semicircularis; caudally the tegmentum is continuous with the medulla oblongata.
tegmentum
MA:0000212
James Malone
Mesencephalic tegmentum
Tomasz Adamusiak
ZFA:0001354
TAO:0001354
mesencephalic tegmentum[accessedResource: ZFA:0001354][accessDate: 10-05-2010]
EMAPA:18215
Subdivision of the midbrain lying anterior to the tectum and posterior to the substantia nigra and cerebral peduncle.
Multi-tissue structure that is the ventral part of the midbrain and develops from the basal plate. The tegmentum is bordered rostrally by the synencephalon, dorsal thalamus and posterior tuberculum, ventrally by the hypothalamus, and dorsolaterally by the torus semicircularis; caudally the tegmentum is continuous with the medulla oblongata.[accessedResource: ZFA:0001354][accessDate: 10-05-2010]
Tegmentum of midbrain
midbrain tegmentum
midbrain tegmentum[accessedResource: ZFA:0001354][accessDate: 10-05-2010]
MAT:0000452
FMAID:62393
Tegmentum of midbrain[accessedResource: FMAID:62393][accessDate: 10-05-2010]
Subdivision of the midbrain lying anterior to the tectum and posterior to the substantia nigra and cerebral peduncle.[accessedResource: FMAID:62393][accessDate: 10-05-2010]
A supporting cell projecting inward from the basement membrane of seminiferous tubules. They surround and nourish the developing male germ cells and secrete androgen binding protein. Their tight junctions with the spermatogonia and spermatocytes provide a blood-testis barrier.[accessedResource: CL:0000216][accessDate: 10-05-2010]
A supporting cell projecting inward from the basement membrane of seminiferous tubules. They surround and nourish the developing male germ cells and secrete androgen binding protein. Their tight junctions with the spermatogonia and spermatocytes provide a blood-testis barrier.
Sertoli cell
Tomasz Adamusiak
CL:0000216
James Malone
Tomasz Adamusiak
The physical state or matrix used to provide nutrients to the organism (e.g., liquid, agar, soil).
probably a role
MO_545
Jie Zheng
media
liquid, agar, soil
ZEA:0015180
GRO:0005300
MAT:0000009
A sending out of new growth or the growth sent out: as a stem or branch with its leaves and appendages especially when not yet mature.
A sending out of new growth or the growth sent out: as a stem or branch with its leaves and appendages especially when not yet mature.[accessedResource: BTO:0001243][accessDate: 10-05-2010]
James Malone
BTO:0001243
GRO:0005300[accessedResource: BTO:0001243][accessDate: 10-05-2010]
shoot
NCIt:C34111
basal plate
James Malone
James Malone
Ele Holloway
DOHH2
PC12
James Malone
NCIH1703
James Malone
Ele Holloway
FBbt:00000095
A dorsal membrane of the embryo.
A dorsal membrane of the embryo.[accessedResource: FBbt:00000095][accessDate: 10-05-2010]
amnioserosa
James Malone
Pulmonary Emphysema[accessedResource: NCIt:C3348][accessDate: 10-05-2010]
NCIt:C3348
A subcategory of chronic obstructive pulmonary disease (COPD). It occurs in people who smoke and suffer from chronic bronchitis. It is characterized by inflation of the alveoli, alveolar wall damage, and reduction in the number of alveoli, resulting in difficulty breathing.[accessedResource: NCIt:C3348][accessDate: 10-05-2010]
A subcategory of chronic obstructive pulmonary disease (COPD). It occurs in people who smoke and suffer from chronic bronchitis. It is characterized by inflation of the alveoli, alveolar wall damage, and reduction in the number of alveoli, resulting in difficulty breathing.
emphysema
James Malone
EMPHYSEMA, PULMONARY
motor cortex
James Malone
1.8
James Malone
Synonymous with lymphoid neoplasm EFO_0001642 - use instead.
true
haematological neoplasm
DOID:253
OntologyMappingImporter following DOID:253
obsolete_hematological neoplasm
BTO:0000759
liver
MA:0000358
1: A large very vascular glandular organ of vertebrates that secretes bile and causes important changes in many of the substances contained in the blood (as by converting sugars into glycogen which it stores up until required and by forming urea).n2: Any of various large compound glands associated with the digestive tract of invertebrate animals and probably concerned with the secretion of digestive enzymes.
Lobular organ which has as its parts lobules connected to the biliary tree. Examples: There is only one liver.[accessedResource: FMAID:7197][accessDate: 10-05-2010]
XAO:0000133
James Malone
MAT:0000097
1: A large very vascular glandular organ of vertebrates that secretes bile and causes important changes in many of the substances contained in the blood (as by converting sugars into glycogen which it stores up until required and by forming urea).n2: Any of various large compound glands associated with the digestive tract of invertebrate animals and probably concerned with the secretion of digestive enzymes.[accessedResource: BTO:0000759][accessDate: 10-05-2010]
EMAPA:16846
TAO:0000123
FMAID:7197
EHDAA:2197
ZFA:0000123
Lobular organ which has as its parts lobules connected to the biliary tree. Examples: There is only one liver.
EV:0100089
MFO:0003060
InChIKey=HYIMSNHJOBLJNT-UHFFFAOYAE
COC(=O)C1=C(C)NC(C)=C(C1c1ccccc1[N+]([O-])=O)C(=O)OC
http://www.ebi.ac.uk/efo/EFO_0001578
Nifecard
4-(2'-Nitrophenyl)-2,6-dimethyl-1,4-dihydropyridin-3,5-dicarbonsaeuredimethylester
Nifecor
A dihydropyridine that has formula C17H18N2O6.
Adapine
CHEBI:7565
Procardia
C17H18N2O6
InChI=1/C17H18N2O6/c1-9-13(16(20)24-3)15(14(10(2)18-9)17(21)25-4)11-7-5-6-8-12(11)19(22)23/h5-8,15,18H,1-4H3
nifedipinum
Coracten
dimethyl 2,6-dimethyl-4-(2-nitrophenyl)-1,4-dihydropyridine-3,5-dicarboxylate
nifedipine
nifedipino
Nifedipres
Adalat
Illumina genome analyzer II
Helen Parkinson
Is an instrument is which supports massively parallel sequencing of nucleic acids
high throughput sequencer
DNA/RNA extraction
The procedure used to obtain something from a mixture or compound by chemical or physical or mechanical means, e.g. DNA/RNA extraction
extraction protocol
James Malone
MC116
James Malone
Ele Holloway
GM12003
James Malone
NCIt:C32426
decidua basalis
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158895&type=germplasm
CS57871 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158895&type=germplasm
CS57871
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158670&type=germplasm
CS57646 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158670&type=germplasm
CS57646
James Malone
vegetative apex
James Malone
Ele Holloway
MA:0000340
intestinum jejunum[accessedResource: BTO:0000657][accessDate: 10-05-2010]
intestinum jejunum
James Malone
BTO:0000657
EV:0100074
MAT:0000045
FMAID:7207
SAEL:56
NCIt:C12388
jejunum
The section of the small intestine that comprises the first two fifths beyond the duodenum and that is larger, thicker-walled, and more vascular and has more circular folds than the ileum.[accessedResource: BTO:0000657][accessDate: 10-05-2010]
The portion of the small intestine that extends from the duodenum to the ileum.
The portion of the small intestine that extends from the duodenum to the ileum.[accessedResource: NCIt:C12388][accessDate: 10-05-2010]
The section of the small intestine that comprises the first two fifths beyond the duodenum and that is larger, thicker-walled, and more vascular and has more circular folds than the ileum.
3,5,7,3',4'-PENTAHYDROXYFLAVONE
CHEBI:16243
quercetin
InChIKey=REFJWTPEDVJJIY-UHFFFAOYAW
InChI=1/C15H10O7/c16-7-4-10(19)12-11(5-7)22-15(14(21)13(12)20)6-1-2-8(17)9(18)3-6/h1-5,16-19,21H
C15H10O7
http://www.ebi.ac.uk/efo/EFO_0001600
2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-4H-chromen-4-one
A pentahydroxyflavone that has formula C15H10O7.
Oc1cc(O)c2c(c1)oc(-c1ccc(O)c(O)c1)c(O)c2=O
MO_825
http://www.ebi.ac.uk/efo/EFO_0001705
A mass unit which is equal to one thousandth of a kilogram or 10^[-3] kg.
Tomasz Adamusiak
gram
A gram is a mass unit which is equal to one-thousanth of a kilogram.
g
Jie Zheng
true
James Malone
Parkinsonian disorder[accessedResource: NIFSTD:birnlex_2098][accessDate: 10-05-2010]
Paralysis Agitans[accessedResource: NIFSTD:birnlex_2098][accessDate: 10-05-2010]
Idiopathic PD
Parkinson's disease (disorder)[accessedResource: DOID:14330][accessDate: 10-05-2010]
James Malone
Parkinson syndrome
Idiopathic PD[accessedResource: NIFSTD:birnlex_2098][accessDate: 10-05-2010]
Tomasz Adamusiak
Parkinson's disease NOS (disorder)[accessedResource: DOID:14330][accessDate: 10-05-2010]
Parkinson's syndrome
Parkinson's disease NOS
Parkinsons[accessedResource: NIFSTD:birnlex_2098][accessDate: 10-05-2010]
Parkinson's syndrome[accessedResource: NIFSTD:birnlex_2098][accessDate: 10-05-2010]
Parkinson syndrome[accessedResource: NIFSTD:birnlex_2098][accessDate: 10-05-2010]
Parkinson's disease NOS[accessedResource: DOID:14330][accessDate: 10-05-2010]
DOID:14330
Parkinson's disease
Parkinson's disease (disorder)
Parkinson disease
Parkinsonian disorder
Parkinsons
Parkinson's disease NOS (disorder)
paralysis agitans
Ele Holloway
NIFSTD:birnlex_2098
Parkinson disease[accessedResource: DOID:14330][accessDate: 10-05-2010]
MA:0002703
nail
EV:0100159
EMAPA:18734
Nail plate
FMAID:54326
James Malone
claw
MAT:0000158
Nail plate[accessedResource: FMAID:54326][accessDate: 10-05-2010]
claw[accessedResource: MAT:0000158][accessDate: 10-05-2010]
MP:0006278
protruding sac formed by dilation of the aorta
protruding sac formed by dilation of the aorta[accessedResource: MP:0006278][accessDate: 10-05-2010]
aortic aneurysm
James Malone
leg
James Malone
One of the two lower extremities in humans used for locomotion and support.
A limb of an animal used especially for supporting the body and for walking.[accessedResource: BTO:0000721][accessDate: 10-05-2010]
One of the two lower extremities in humans used for locomotion and support.[accessedResource: NCIt:C32974][accessDate: 10-05-2010]
A limb of an animal used especially for supporting the body and for walking.
BTO:0000721
NCIt:C32974
A bacterial disease is a disease factor that is caused primarily by bacteria.
bacterial disease
James Malone
CN(C)CCCN1c2ccccc2Sc2ccc(Cl)cc12
3-(2-chlorophenothiazin-10-yl)-N,N-dimethyl-propan-1-amine
A phenothiazine that has formula C17H19ClN2S.
Chlorpromados
InChIKey=ZPEIMTDSQAKGNT-UHFFFAOYAX
Chlorderazin
CHEBI:3647
N-(3-dimethylaminopropyl)-3-chlorophenothiazine
chlorpromazinum
Thorazine
Aminazine
chlorpromazine
clorpromazina
Contomin
Chloropromazine
3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine
A substituted phenothiazine in which the ring nitrogen at position 10 is attached to C-3 of an N,N-dimethylpropanamine moiety.
3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethyl-1-propanamine
http://www.ebi.ac.uk/efo/EFO_0001503
C17H19ClN2S
InChI=1/C17H19ClN2S/c1-19(2)10-5-11-20-14-6-3-4-7-16(14)21-17-9-8-13(18)12-15(17)20/h3-4,6-9,12H,5,10-11H2,1-2H3
CPZ
James Malone
Largactil
D283 MED
HTB-185
James Malone
D283 Med
D283Med
Ele Holloway
CL:0000115
BTO:0001176
The main type of cell found in the inside lining of blood vessels, lymph vessels, and the heart.
The main type of cell found in the inside lining of blood vessels, lymph vessels, and the heart.[accessedResource: BTO:0001176][accessDate: 10-05-2010]
endothelial cell
James Malone
WM793-P1N1
James Malone
Ele Holloway
BTO:0000231
Either of the two hollow convoluted lateral halves of the cerebrum.
Either of the two hollow convoluted lateral halves of the cerebrum.[accessedResource: BTO:0000231][accessDate: 10-05-2010]
cerebral hemisphere
James Malone
Ele Holloway
FBbt:00000090
dorsal ridge
James Malone
Sarcomatoid Renal Cell Carcinoma
Adenocarcinoma of kidney
Grawitz tumour
Hypernephroid Carcinoma
Clear cell carcinoma of kidney (disorder)[accessedResource: DOID:4467][accessDate: 10-05-2010]
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinoma of kidney
Carcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinoma, Renal Cell
Clear Cell Carcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
DOID:4467
conventional (Clear cell) renal cell carcinoma
GeneRIF:15062033
Duct Carcinoma, Collecting (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
conventional (Clear cell) renal cell carcinoma[accessedResource: DOID:4467][accessDate: 10-05-2010]
Sarcomatoid Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Clear Cell Adenocarcinoma, Kidney
Adenocarcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Tumor, Grawitz
Clear Cell Adenocarcinoma of Kidney
Carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Clear cell carcinoma of kidney (disorder)
Carcinomas, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Conventional Renal Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
obsolete_conventional clear cell renal carcinoma
Adenocarcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Clear cell carcinoma of kidney is a renal cell carcinoma described as the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
Hypernephroid Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Papillary Renal Cell Carcinoma
clear cell carcinoma of kidney
GeneRIF:15709172
conventional renal cell carcinoma
Carcinomas, Collecting Duct (Kidney)
Hypernephroma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
GeneRIF:12576453
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
Renal Cell Carcinomas
duplicate of clear cell adenocarcinoma EFO_0000348
Hypernephromas
SNOMEDCT:254915003
Kidney Clear Cell Carcinoma
Hypernephroid Carcinomas
Clear Cell Adenocarcinoma of Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
GeneRIF:14550470
Nephroid Carcinomas
Clear Cell Adenocarcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Carcinoma, Nephroid
Carcinomas, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephroid Carcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinoma, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephromas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.[accessedResource: DOID:4467][accessDate: 10-05-2010]
Kidney Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Conventional (Clear Cell) Renal Cell Adenocarcinoma
Renal Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
MSH:D002292
Collecting Duct Carcinomas (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Hypernephroma
Kidney Clear Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Adenocarcinoma, Renal Cell
true
Clear Cell Renal Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophobe Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.
Grawitz tumour[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Papillary Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Clear Cell Adenocarcinoma
Chromophobe Renal Cell Carcinoma
Clear Cell Renal Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.
1.8
Renal Clear Cell Carcinoma
Carcinoma, Collecting Duct (Kidney)
Renal Cell Adenocarcinomas
NCIt:C4033
Clear Cell Adenocarcinoma of the Kidney
Conventional (Clear Cell) Renal Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
James Malone
Clear cell carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Clear Cell Carcinoma of the Kidney
Grawitz Tumor[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Clear Cell Renal Cell Carcinoma
Renal Cell Adenocarcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
http://www.arabidopsis.org/servlets/TairObject?id=1005158802&type=germplasm
CS57778 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158802&type=germplasm
CS57778
James Malone
C3H10T1/2
James Malone
Ele Holloway
neuron cell[accessedResource: NIFSTD:sao1417703748][accessDate: 10-05-2010]
Tomasz Adamusiak
A grayish or reddish granular cell with specialized processes that is the fundamental functional unit of nervous tissue.
CL:0000540
NIFSTD:sao1417703748
James Malone
nerve cell[accessedResource: CL:0000540][accessDate: 10-05-2010]
The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.[accessedResource: CL:0000540][accessDate: 10-05-2010]
The basic cellular units of nervous tissue. Neurons are polarized cells with defined regions consisting of the cell body, an axon, and dendrites, although some types of neurons lack axons or dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.[accessedResource: NIFSTD:sao1417703748][accessDate: 10-05-2010]
A grayish or reddish granular cell with specialized processes that is the fundamental functional unit of nervous tissue.[accessedResource: BTO:0000938][accessDate: 10-05-2010]
BTO:0000938
neuronal cell
The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.
neuronal cell[accessedResource: BTO:0000938][accessDate: 10-05-2010]
nerve cell
neuron
neuron cell
The basic cellular units of nervous tissue. Neurons are polarized cells with defined regions consisting of the cell body, an axon, and dendrites, although some types of neurons lack axons or dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.
SK-N-MC
Ele Holloway
James Malone
HB-10
SKNMc
MA:0000154
EV:0100156
hair follicle
James Malone
Ele Holloway
GeneRIF:12845688
Multiple myeloma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:55921005][accessDate: 10-05-2010]
GeneRIF:12070027
GeneRIF:14976049
GeneRIF:12651942
GeneRIF:11792572
GeneRIF:11840273
GeneRIF:12393489
GeneRIF:11872084
Myelomatosis
Multiple myeloma, no ICD-O subtype (morphologic abnormality)
GeneRIF:11985783
GeneRIF:11902142
Multiple myeloma, no ICD-O subtype
Myeloma[accessedResource: SNOMEDCT:109989006][accessDate: 10-05-2010]
Kahler's disease
Myeloma, NOS
GeneRIF:15010462
GeneRIF:12743296
GeneRIF:12231535
GeneRIF:11877293
GeneRIF:12200385
GeneRIF:15626731
GeneRIF:15199411
GeneRIF:12888915
GeneRIF:15788896
GeneRIF:15731173
GeneRIF:15203873
GeneRIF:16030194
myeloma
GeneRIF:12665525
GeneRIF:12200397
GeneRIF:12239172
MULT MYELM W/O REMISSION[accessedResource: ICD9:203.00][accessDate: 10-05-2010]
GeneRIF:11918087
GeneRIF:12161360
GeneRIF:12433678
GeneRIF:12970749
GeneRIF:15725479
GeneRIF:12430875
GeneRIF:12604407
GeneRIF:15061198
GeneRIF:15458509
GeneRIF:12569357
Multiple myeloma, morphology (morphologic abnormality)
GeneRIF:12649140
GeneRIF:15205949
GeneRIF:12791655
GeneRIF:12560229
GeneRIF:15735670
GeneRIF:12543106
Multiple myeloma, no ICD-O subtype[accessedResource: SNOMEDCT:55921005][accessDate: 10-05-2010]
GeneRIF:15475450
GeneRIF:15920166
NCIt:C3242
[M]Plasma cell myeloma
GeneRIF:15933061
Plasmacytic myeloma[accessedResource: SNOMEDCT:109989006][accessDate: 10-05-2010]
GeneRIF:15940250
GeneRIF:15479729
GeneRIF:12070032
ICD9:203.0
GeneRIF:11940485
GeneRIF:14656874
Multiple myeloma (clinical)[accessedResource: SNOMEDCT:109989006][accessDate: 10-05-2010]
GeneRIF:12002771
GeneRIF:14513045
GeneRIF:14514474
GeneRIF:11568006
GeneRIF:15692064
GeneRIF:16044163
GeneRIF:15070697
GeneRIF:11877256
GeneRIF:14755377
GeneRIF:15692072
GeneRIF:16026644
GeneRIF:12459170
Plasma Cell Myeloma[accessedResource: NCIt:C3242][accessDate: 10-05-2010]
GeneRIF:11830493
Multiple myeloma (clinical)
GeneRIF:15070700
GeneRIF:15215163
GeneRIF:15657357
GeneRIF:15731178
GeneRIF:15172968
GeneRIF:11896542
GeneRIF:12001122
Multiple myeloma (disorder)[accessedResource: SNOMEDCT:109989006][accessDate: 10-05-2010]
GeneRIF:11877294
A bone marrow-based plasma cell neoplasm characterized by a serum monoclonal protein and skeletal destruction with osteolytic lesions, pathological fractures, bone pain, hypercalcemia, and anemia. Clinical variants include non-secretory myeloma, smoldering myeloma, indolent myeloma, and plasma cell leukemia. (WHO, 2001)
GeneRIF:12456503
GeneRIF:15753365
GeneRIF:15471949
GeneRIF:15041705
GeneRIF:16002735
A bone marrow-based plasma cell neoplasm characterized by a serum monoclonal protein and skeletal destruction with osteolytic lesions, pathological fractures, bone pain, hypercalcemia, and anemia. Clinical variants include non-secretory myeloma, smoldering myeloma, indolent myeloma, and plasma cell leukemia. (WHO, 2001)[accessedResource: NCIt:C3242][accessDate: 10-05-2010]
GeneRIF:15534117
GeneRIF:15138161
GeneRIF:12393542
GeneRIF:14677065
GeneRIF:12969979
GeneRIF:12433679
GeneRIF:15677557
GeneRIF:12199782
GeneRIF:15902294
GeneRIF:15878977
multiple myeloma
GeneRIF:12682635
GeneRIF:14513053
GeneRIF:15070695
GeneRIF:15000866
Plasma Cell Myeloma
GeneRIF:11830495
GeneRIF:12574959
GeneRIF:14592826
DOID:9538
GeneRIF:14512299
SNOMEDCT:55921005
GeneRIF:15899516
Multiple myeloma, morphology (morphologic abnormality)[accessedResource: SNOMEDCT:55921005][accessDate: 10-05-2010]
GeneRIF:15512823
GeneRIF:11877296
MULT MYELM W/O REMISSION
GeneRIF:12471202
GeneRIF:14692531
GeneRIF:11745168
GeneRIF:12931219
Myeloma, NOS[accessedResource: SNOMEDCT:55921005][accessDate: 10-05-2010]
GeneRIF:15705883
GeneRIF:16091744
Multiple myeloma without mention of remission[accessedResource: ICD9:203.00][accessDate: 10-05-2010]
GeneRIF:14715624
James Malone
GeneRIF:15671442
GeneRIF:12626569
GeneRIF:11830480
GeneRIF:12855565
Multiple myeloma (disorder)
GeneRIF:12368157
GeneRIF:12707028
GeneRIF:15003892
GeneRIF:12576455
[M]Plasma cell myeloma[accessedResource: SNOMEDCT:55921005][accessDate: 10-05-2010]
Plasmacytic myeloma
SNOMEDCT:109989006
GeneRIF:12660820
GeneRIF:14671622
GeneRIF:11839670
GeneRIF:12517814
Myelomatosis[accessedResource: SNOMEDCT:55921005][accessDate: 10-05-2010]
Kahler's disease[accessedResource: SNOMEDCT:109989006][accessDate: 10-05-2010]
GeneRIF:15583754
Multiple myeloma without mention of remission
ICD9:203.00
GeneRIF:12351414
GeneRIF:12377412
FBbt:00005744
embryonic dorsal epidermis
James Malone
musculus quadriceps femoris
musculus quadriceps femoris[accessedResource: BTO:0001149][accessDate: 10-05-2010]
The greater extensor muscle of the front of the thigh that is divided into four parts: rectus femoris, vastus intermedius, vastus lateralis, and vastus medialis.
James Malone
Quadriceps Muscle of the Thigh
quadriceps muscle of thigh[accessedResource: BTO:0001149][accessDate: 10-05-2010]
A group of four powerful muscles in the front of the thigh. Their actions involve the extension of the knee joint.[accessedResource: NCIt:C33441][accessDate: 10-05-2010]
The greater extensor muscle of the front of the thigh that is divided into four parts: rectus femoris, vastus intermedius, vastus lateralis, and vastus medialis.[accessedResource: BTO:0001149][accessDate: 10-05-2010]
quadricep muscle
A group of four powerful muscles in the front of the thigh. Their actions involve the extension of the knee joint.
quadriceps muscle of thigh
quadriceps
quadriceps[accessedResource: BTO:0001149][accessDate: 10-05-2010]
NCIt:C33441
BTO:0001149
proximal part of limb
The proximal part of the limb (e.g. between shoulder and elbow)
MA:0002717
stylopod
James Malone
The proximal part of the limb (e.g. between shoulder and elbow)[accessedResource: MAT:0000093][accessDate: 10-05-2010]
proximal part of limb[accessedResource: MAT:0000093][accessDate: 10-05-2010]
MAT:0000093
BE2C
James Malone
Ele Holloway
ACHN
Ele Holloway
James Malone
spermatheca[accessedResource: MAT:0000168][accessDate: 10-05-2010]
In most female insects, the usual sperm storage organ; a posteroventral ectodermal caecum of abdominal segment VIII located just behind the common oviduct; attached to the anterodorsal end of the vagina if the latter is developed; usually single but sometimes up to four are present. In mosquitoes, one, two or three may be present, each consisting of a spermathecal capsule at the end of a spermathecal duct.[accessedResource: TGMA:0000560][accessDate: 10-05-2010]
spermathecum
TGMA:0000560
spermatheca
"reptaculum seminis"
"reptaculum seminis"[accessedResource: TGMA:0000560][accessDate: 10-05-2010]
TADS:0000434
WBbt:0005319
FBbt:00004921
MAT:0000168
James Malone
seminal receptacle[accessedResource: MAT:0000168][accessDate: 10-05-2010]
In most female insects, the usual sperm storage organ; a posteroventral ectodermal caecum of abdominal segment VIII located just behind the common oviduct; attached to the anterodorsal end of the vagina if the latter is developed; usually single but sometimes up to four are present. In mosquitoes, one, two or three may be present, each consisting of a spermathecal capsule at the end of a spermathecal duct.
seminal receptacle
a[accessedResource: PATO:0001341][accessDate: 10-05-2010]
MO_659
a mating type (yeast)
A S. cerevisiae mating type cells that secrete a pheromone that in alpha haploids stimulates processes that lead to mating.
PATO:0001341
a mating type (yeast)[accessedResource: PATO:0001341][accessDate: 10-05-2010]
mating type a
James Malone
a
A S. cerevisiae mating type cells that secrete a pheromone that in alpha haploids stimulates processes that lead to mating.[accessedResource: PATO:0001341][accessDate: 10-05-2010]
NCIH630
James Malone
Ele Holloway
KU812
James Malone
Ele Holloway
Organism subdivision which is the part of the body posterior to the vent which includes the anal and caudal fins.
ZFA:0001117
BTO:0001348
WBbt:0005741
The rear end or a process or prolongation of the rear end of the body of an animal.
post-vent region
tail
post-vent region[accessedResource: ZFA:0001117][accessDate: 10-05-2010]
The rear end or a process or prolongation of the rear end of the body of an animal.[accessedResource: BTO:0001348][accessDate: 10-05-2010]
EMAPA:16748
James Malone
XAO:0003026
MFO:0081020
SAEL:103
MAT:0000094
MA:0000008
Organism subdivision which is the part of the body posterior to the vent which includes the anal and caudal fins.[accessedResource: ZFA:0001117][accessDate: 10-05-2010]
Human Immunodeficiency Virus, Type 1
NCIt:C14220
Human Immunodeficiency Virus, Type 1[accessedResource: NCIt:C14220][accessDate: 10-05-2010]
HIV-1 seropositive
James Malone
The type species of lentivirus and the etiologic agent of acquired immunodeficiency syndrome (AIDS). It is characterized by its cytopathic effect and affinity for the T4-lymphocyte.
Human Immunodeficiency Virus 1
The type species of lentivirus and the etiologic agent of acquired immunodeficiency syndrome (AIDS). It is characterized by its cytopathic effect and affinity for the T4-lymphocyte.[accessedResource: NCIt:C14220][accessDate: 10-05-2010]
HIV-1
Human Immunodeficiency Virus 1[accessedResource: NCIt:C14220][accessDate: 10-05-2010]
GM12006
James Malone
http://www.ebi.ac.uk/efo/EFO_0001830
CHEBI:27027
micronutrient
James Malone
An event that has caused the permanent cessation of all vital functions; the end of life. Can be applied to a whole organism or to a part of an organism.
event death
James Malone
Racial Group[accessedResource: NCIt:C17049][accessDate: 10-05-2010]
A race is a popluation categorized on the basis of various sets of heritable characteristics.
An arbitrary classification of a taxonomic group that is a division of a species. It usually arises as a consequence of geographical isolation within a species and is characterized by shared heredity, physical attributes and behavior, and in the case of humans, by common history, nationality, or geographic distribution.[accessedResource: NCIt:C17049][accessDate: 10-05-2010]
race
NCIt:C17049
Racial Group
James Malone
An arbitrary classification of a taxonomic group that is a division of a species. It usually arises as a consequence of geographical isolation within a species and is characterized by shared heredity, physical attributes and behavior, and in the case of humans, by common history, nationality, or geographic distribution.
internal ear[accessedResource: BTO:0000630][accessDate: 10-05-2010]
internal ear
inner ear
MIAA:0000145
The essential organ of hearing and equilibrium that is located in the temporal bone, is innervated by the auditory nerve, and includes the vestibule, the semicircular canals, and the cochlea.
James Malone
inner ear[accessedResource: BTO:0000630][accessDate: 10-05-2010]
auris interna
inner ear structure
The essential organ of hearing and equilibrium that is located in the temporal bone, is innervated by the auditory nerve, and includes the vestibule, the semicircular canals, and the cochlea.[accessedResource: BTO:0000630][accessDate: 10-05-2010]
auris interna[accessedResource: BTO:0000630][accessDate: 10-05-2010]
BTO:0000630
ochratoxin A
N-(((3R)-5-chloro-8-hydroxy-3-methyl-1-oxo-7-isochromanyl)carbonyl)-3-phenyl-L-alanine
James Malone
C[C@@H]1Cc2c(Cl)cc(cc2C(=O)O1)C(=O)N[C@@H](Cc1ccccc1)C(O)=O
InChI=1/C20H18ClNO5/c1-11-7-14-15(20(26)27-11)9-13(10-16(14)21)18(23)22-17(19(24)25)8-12-5-3-2-4-6-12/h2-6,9-11,17H,7-8H2,1H3,(H,22,23)(H,24,25)/t11-,17+/m1/s1/f/h22,24H
(-)-N-((5-chloro-8-hydroxy-3-methyl-1-oxo-7-isochromanyl)carbonyl)-3-phenylalanine
A phenylalanine derivative that has formula C20H18ClNO6.
(R)-N-((5-chloro-3,4-dihydro-8-hydroxy-3-methyl-1-oxo-1H-2-benzopyran-7-yl)carbonyl)phenylalanine
N-{[(3R)-5-chloro-8-hydroxy-3-methyl-1-oxo-3,4-dihydro-1H-2-benzopyran-7-yl]carbonyl}-L-phenylalanine
http://www.ebi.ac.uk/efo/EFO_0001584
C20H18ClNO6
InChIKey=SXHXNWAJMDYKPB-CEHVPASVDA
CHEBI:7719
true
http://www.ebi.ac.uk/efo/EFO_0001807
A volume per unit volume unit which is equal to one millionth of a liter of solute in one liter of solution.
James Malone
ml/l
milliliter per liter
A milliliter per liter is a unit of concentrationdefined as a volume per unit volume unit which is equal to one millionth of a liter of solute in one liter of solution.
UO:0000207
SNOMEDCT:128098009
Scott syndrome
James Malone
James Malone
MDAMB453
VH-64
James Malone
Ele Holloway
1.8
James Malone
MAT:0000342
WBbt:0005760
true
obsolete_somatic nervous system
Duplicate use EFO_0000892
OntologyMappingImporter following MAT:0000342
MEG01
James Malone
Ele Holloway
CHP212
James Malone
Ele Holloway
N231
James Malone
Ele Holloway
PO:0020094
ovum[accessedResource: MAT:0000213][accessDate: 10-05-2010]
egg[accessedResource: MAT:0000213][accessDate: 10-05-2010]
OntologyMappingImporter following MAT:0000213
plant egg
James Malone
egg
ovum
MAT:0000213
http://www.ebi.ac.uk/efo/EFO_0001847
cytostatic
antineoplastic
antineoplastic agents
antineoplastic drug
CHEBI:35610
James Malone
A substance that inhibits or prevents the proliferation of neoplasms.
NIFSTD:birnlex_2117
experiment
experimental process
MFO:0002860
MA:0000216
spinal cord
XAO:0000020
EV:0100316
EMAPA:17577
FMAID:7647
TAO:0000075
Segment of neuraxis that has as its parts gray matter and white matter that surround the central canal. Examples: There is only one spinal cord.[accessedResource: FMAID:7647][accessDate: 10-05-2010]
MAT:0000183
SAEL:100
spinal cord structure
James Malone
The cord of nervous tissue that extends from the brain lengthwise along the back in the vertebral canal, gives off the pairs of spinal nerves, carries impulses to and from the brain, and serves as a center for initiating and coordinating many reflex acts.[accessedResource: BTO:0001279][accessDate: 10-05-2010]
Segment of neuraxis that has as its parts gray matter and white matter that surround the central canal. Examples: There is only one spinal cord.
BTO:0001279
ZFA:0000075
EHDAA:2863
spinal cord structure[accessedResource: ZFA:0000075][accessDate: 10-05-2010]
The cord of nervous tissue that extends from the brain lengthwise along the back in the vertebral canal, gives off the pairs of spinal nerves, carries impulses to and from the brain, and serves as a center for initiating and coordinating many reflex acts.
Ara-C-sensitive parental cell line
EB3
James Malone
Ele Holloway
SW872
James Malone
Ele Holloway
B117P
James Malone
Ele Holloway
MO_227
change in temperature, change in watering regime
Environmental stress is a treatment where some aspect of the environment is perturbed in order to stress the organism or culture, e.g. change in temperature, change in watering regime
environmental stress
Tomasz Adamusiak
Jie Zheng
James Malone
NCIt:C53654
A disease of the heart muscle or myocardium proper whose cause is unknown.
A disease of the heart muscle or myocardium proper whose cause is unknown.[accessedResource: NCIt:C53654][accessDate: 10-05-2010]
idiopathic cardiomyopathy
James Malone
GeneRIF:15001561
GeneRIF:15867174
GeneRIF:15601946
GeneRIF:12849738
GeneRIF:16155108
GeneRIF:15078802
GeneRIF:15147523
GeneRIF:16194580
GeneRIF:15059967
GeneRIF:12232802
GeneRIF:14615282
GeneRIF:15734859
GeneRIF:12975460
GeneRIF:12736150
GeneRIF:15512786
GeneRIF:12651615
GeneRIF:12883833
Ischaemia, NOS
GeneRIF:11801667
GeneRIF:16052682
Ischemia (disorder)
GeneRIF:12904478
GeneRIF:14747752
GeneRIF:12947324
GeneRIF:15306252
GeneRIF:14583338
GeneRIF:15050129
GeneRIF:12538716
GeneRIF:12969257
GeneRIF:12130736
GeneRIF:12368657
GeneRIF:15502938
Ischaemia, NOS[accessedResource: SNOMEDCT:52674009][accessDate: 10-05-2010]
GeneRIF:14965033
GeneRIF:15489954
GeneRIF:12598725
GeneRIF:15262323
GeneRIF:15030400
GeneRIF:16040592
GeneRIF:11919511
GeneRIF:15241185
GeneRIF:12454802
GeneRIF:15309411
GeneRIF:12963035
GeneRIF:12453540
GeneRIF:14578604
GeneRIF:12718435
GeneRIF:15612529
GeneRIF:12699784
GeneRIF:11822892
GeneRIF:12707035
GeneRIF:15239105
GeneRIF:12716944
GeneRIF:16284105
GeneRIF:12598732
GeneRIF:14500739
GeneRIF:12535945
GeneRIF:14568904
GeneRIF:15316398
GeneRIF:12468103
GeneRIF:12709584
GeneRIF:12384456
GeneRIF:12623065
GeneRIF:12076861
GeneRIF:15017017
GeneRIF:12172377
GeneRIF:15851594
A hypoperfusion of the BLOOD through an organ or tissue caused by a PATHOLOGIC CONSTRICTION or obstruction of its BLOOD VESSELS, or an absence of BLOOD CIRCULATION.[accessedResource: MSH:D007511][accessDate: 10-05-2010]
GeneRIF:12165407
GeneRIF:12144846
GeneRIF:15729291
GeneRIF:12577622
GeneRIF:12871572
GeneRIF:15961228
GeneRIF:15575898
James Malone
GeneRIF:15345651
GeneRIF:12714332
GeneRIF:15791006
GeneRIF:12145195
GeneRIF:12031986
Ischemia[accessedResource: DOID:326][accessDate: 10-05-2010]
GeneRIF:15653094
GeneRIF:11877468
GeneRIF:15358666
GeneRIF:15362036
GeneRIF:15723986
GeneRIF:12812761
GeneRIF:15350969
GeneRIF:16077081
GeneRIF:15380477
GeneRIF:12923494
GeneRIF:14507649
Ischemia, NOS[accessedResource: SNOMEDCT:52674009][accessDate: 10-05-2010]
GeneRIF:15856211
GeneRIF:15013953
GeneRIF:16055264
GeneRIF:11837786
GeneRIF:15339931
GeneRIF:12813366
DOID:326
GeneRIF:14670843
GeneRIF:15081307
GeneRIF:14741413
GeneRIF:14753415
GeneRIF:12529269
GeneRIF:14983226
GeneRIF:15817274
GeneRIF:15207275
GeneRIF:12210757
GeneRIF:15854743
Ischemia, NOS
GeneRIF:12414116
GeneRIF:11854323
GeneRIF:15262832
GeneRIF:15117851
GeneRIF:12950452
GeneRIF:12805025
GeneRIF:12730952
GeneRIF:12672549
GeneRIF:15613744
GeneRIF:15994441
GeneRIF:12540780
GeneRIF:12753927
Ischemias[accessedResource: MSH:D007511][accessDate: 10-05-2010]
GeneRIF:15742404
GeneRIF:15284219
GeneRIF:15543936
GeneRIF:16115445
GeneRIF:12782295
GeneRIF:16095866
GeneRIF:12437588
GeneRIF:15829914
GeneRIF:15181368
GeneRIF:12489796
GeneRIF:14643014
GeneRIF:15142843
GeneRIF:12415119
GeneRIF:12078512
GeneRIF:15025939
GeneRIF:15309413
Ischemias
GeneRIF:16166266
GeneRIF:12595498
GeneRIF:16100246
GeneRIF:12746188
GeneRIF:15561908
GeneRIF:11756680
GeneRIF:15541008
GeneRIF:12600263
GeneRIF:12208351
GeneRIF:15474357
GeneRIF:15637314
GeneRIF:15611365
GeneRIF:12031847
GeneRIF:15837573
GeneRIF:11934832
Ischemia (disorder)[accessedResource: DOID:326][accessDate: 10-05-2010]
GeneRIF:14969349
GeneRIF:11945023
GeneRIF:15518712
A hypoperfusion of the BLOOD through an organ or tissue caused by a PATHOLOGIC CONSTRICTION or obstruction of its BLOOD VESSELS, or an absence of BLOOD CIRCULATION.
GeneRIF:15778274
GeneRIF:16127466
GeneRIF:14730711
SNOMEDCT:52674009
GeneRIF:12580450
GeneRIF:15173034
GeneRIF:12593860
GeneRIF:14757696
GeneRIF:14983993
ischemia
ischaemia
GeneRIF:14502288
GeneRIF:12126535
GeneRIF:12207967
GeneRIF:12201360
GeneRIF:12645009
GeneRIF:15105298
GeneRIF:15953587
GeneRIF:12528815
GeneRIF:12088756
GeneRIF:15206826
GeneRIF:15804717
GeneRIF:15901600
GeneRIF:14871559
GeneRIF:15548426
GeneRIF:15820254
GeneRIF:12860919
GeneRIF:15818741
GeneRIF:14522822
GeneRIF:15845077
GeneRIF:12897086
GeneRIF:15579510
GeneRIF:12352321
GeneRIF:15687494
GeneRIF:15358037
GeneRIF:12657670
GeneRIF:15790561
GeneRIF:15752542
GeneRIF:14732352
GeneRIF:15316036
GeneRIF:12099359
GeneRIF:12766162
MSH:D007511
GeneRIF:15090052
GeneRIF:12490603
GeneRIF:12887688
GeneRIF:15223375
GeneRIF:14599979
http://www.ebi.ac.uk/efo/EFO_0001893
CHEBI:50683
folic acid reductase inhibitor
James Malone
NCIt:C4250
A locally aggressive malignant neoplasm composed of mature adipocytes showing cell size variation and nuclear atypia. It is often associated with the presence of hyperchromatic multinucleated stromal cells, and varying numbers of lipoblasts. There are three histologic subtypes, sclerosing, inflammatory, and spindle cell liposarcoma. These tumors do not usually metastasize unless they undergo dedifferentiation.
A locally aggressive malignant neoplasm composed of mature adipocytes showing cell size variation and nuclear atypia. It is often associated with the presence of hyperchromatic multinucleated stromal cells, and varying numbers of lipoblasts. There are three histologic subtypes, sclerosing, inflammatory, and spindle cell liposarcoma. These tumors do not usually metastasize unless they undergo dedifferentiation.[accessedResource: NCIt:C4250][accessDate: 10-05-2010]
well-differentiated liposarcoma
Tomasz Adamusiak
James Malone
TAO:0000632
EHDAA:5923
reproductive system - animals
EMAPA:17381
genital system
FMAID:7160
FBbt:00004857
XAO:0000142
Reproductive system[accessedResource: FMAID:7160][accessDate: 10-05-2010]
Reproductive system
animal reproductive system
SAEL:89
EV:0100100
James Malone
reproductive system - animals[accessedResource: MAT:0000305][accessDate: 10-05-2010]
MAT:0000305
genital system[accessedResource: MAT:0000305][accessDate: 10-05-2010]
Jie Zheng
nanomole
James Malone
true
A nanomole is a substance unit equal to one thousandth of one millionth of a mole or 10^-9 mol.
MO_743
http://www.ebi.ac.uk/efo/EFO_0001800
Tomasz Adamusiak
nmol
A substance unit equal to one thousandth of one millionth of a mole or 10^[-9] mol.
COLO-704
Ele Holloway
James Malone
COLO704
ATCC number: CRL-2265
CEM-c1
James Malone
James Malone
intervertebral disc
Intervertebral disk[accessedResource: FMA:10446][accessDate: 10-05-2010]
FMA:10446
MA:0000110
Intervertebral disk
Colorectal Neoplasm
James Malone
Colorectal Carcinoma
Colorectal Carcinoma[accessedResource: MSH:D015179][accessDate: 10-05-2010]
NEOPL COLORECTAL[accessedResource: MSH:D015179][accessDate: 10-05-2010]
Cancers, Colorectal
Tumors or cancer of the COLON or the RECTUM or both. Risk factors for colorectal cancer include chronic ULCERATIVE COLITIS; FAMILIAL POLYPOSIS COLI; exposure to ASBESTOS; and irradiation of the CERVIX UTERI.[accessedResource: MSH:D015179][accessDate: 10-05-2010]
Colorectal Carcinomas[accessedResource: MSH:D015179][accessDate: 10-05-2010]
Colorectal Carcinomas
Tumors or cancer of the COLON or the RECTUM or both. Risk factors for colorectal cancer include chronic ULCERATIVE COLITIS; FAMILIAL POLYPOSIS COLI; exposure to ASBESTOS; and irradiation of the CERVIX UTERI.
Colorectal Tumor
Colorectal Tumors
Cancer, Colorectal[accessedResource: MSH:D015179][accessDate: 10-05-2010]
Neoplasms, Colorectal
COLORECTAL NEOPL
colorectal adenocarcinoma
Colorectal Tumor[accessedResource: MSH:D015179][accessDate: 10-05-2010]
MSH:D015179
Colorectal Neoplasm[accessedResource: MSH:D015179][accessDate: 10-05-2010]
Colorectal Neoplasms[accessedResource: MSH:D015179][accessDate: 10-05-2010]
Colorectal Tumors[accessedResource: MSH:D015179][accessDate: 10-05-2010]
colorectal cancer
Cancers, Colorectal[accessedResource: MSH:D015179][accessDate: 10-05-2010]
DOID:9256
http://www.arabidopsis.org/servlets/TairObject?id=1005158878&type=germplasm
CS57854 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158878&type=germplasm
CS57854
James Malone
A property of a cell which is able to differentiate into into one or more differentiated cell types
pluripotent
GeneRIF:15026168
GeneRIF:12368187
ALZHEIMER DIS EARLY ONSET
GeneRIF:15813938
GeneRIF:15954227
GeneRIF:12232784
GeneRIF:14646594
GeneRIF:15212839
Alzheimer Disease, Early Onset
GeneRIF:12497622
Alzheimer's Disease Pathway[accessedResource: NCIt:C38778][accessDate: 10-05-2010]
GeneRIF:12497631
A dementia which is an incurable disease of unknown cause, starting in late middle age or in old age, that results in progressive memory loss, impaired thinking, disorientation, and changes in personality and mood, that leads in advanced cases to a profound decline in cognitive and physical functioning, and that is marked histologically by the degeneration of brain neurons especially in the cerebral cortex and by the presence of neurofibrillary tangles and plaques containing beta-amyloid.[accessedResource: DOID:10652][accessDate: 10-05-2010]
GeneRIF:15024728
GeneRIF:15337312
GeneRIF:15530656
GeneRIF:15152345
Alzheimer Disease, Late Onset
GeneRIF:14657172
GeneRIF:12142731
GeneRIF:12600718
GeneRIF:16106215
DOID:10652
Dementias, Presenile
GeneRIF:15451372
GeneRIF:12604387
GeneRIF:12112088
GeneRIF:12600716
GeneRIF:14651959
GeneRIF:12600202
GeneRIF:15635706
Alzheimer's disease
GeneRIF:15708435
GeneRIF:14572447
GeneRIF:14999081
GeneRIF:12732730
A degenerative disease of the BRAIN characterized by the insidious onset of DEMENTIA. Impairment of MEMORY, judgment, attention span, and problem solving skills are followed by severe APRAXIAS and a global loss of cognitive abilities. The condition primarily occurs after age 60, and is marked pathologically by severe cortical atrophy and the triad of SENILE PLAQUES; NEUROFIBRILLARY TANGLES; and NEUROPIL THREADS. (From Adams et al., Principles of Neurology, 6th ed, pp1049-57)
GeneRIF:15899246
GeneRIF:15555766
GeneRIF:15106838
GeneRIF:11771745
Disease, Alzheimer
GeneRIF:15665036
GeneRIF:12480753
GeneRIF:12160938
GeneRIF:15464268
GeneRIF:15082170
GeneRIF:12074831
GeneRIF:12528817
GeneRIF:16082716
GeneRIF:15263903
GeneRIF:15181247
GeneRIF:15147516
GeneRIF:16130099
AD
Alzheimer Senile Dementia
GeneRIF:12566926
LATE ONSET ALZHEIMER DIS
Late Onset Alzheimer Disease[accessedResource: MSH:D000544][accessDate: 10-05-2010]
GeneRIF:12928051
GeneRIF:11848684
Alzheimer's disease, NOS[accessedResource: SNOMEDCT:26929004][accessDate: 10-05-2010]
NCIt:C38778
GeneRIF:15255951
GeneRIF:14523627
GeneRIF:11852060
Alzheimers Dementia
GeneRIF:12614671
GeneRIF:12480756
GeneRIF:16258844
GeneRIF:15356202
GeneRIF:16179263
GeneRIF:16226260
Alzheimer's disease (disorder)[accessedResource: SNOMEDCT:26929004][accessDate: 10-05-2010]
GeneRIF:15452311
GeneRIF:12270958
NIFSTD:birnlex_2092
[X]Dementia in Alzheimer's disease, unspecified (disorder)[accessedResource: SNOMEDCT:192164001][accessDate: 10-05-2010]
SNOMEDCT:192160005
GeneRIF:15728175
GeneRIF:16174740
GeneRIF:11798857
GeneRIF:12770689
GeneRIF:12116197
Alzheimers
GeneRIF:15111312
GeneRIF:14519527
GeneRIF:12435432
GeneRIF:15182943
GeneRIF:15172102
GeneRIF:15210531
GeneRIF:15722183
GeneRIF:12826738
GeneRIF:11927360
Disease, Alzheimer[accessedResource: MSH:D000544][accessDate: 10-05-2010]
James Malone
GeneRIF:12925530
Alzheimers Dementia[accessedResource: DOID:10652][accessDate: 10-05-2010]
Alzheimer Type Dementia
GeneRIF:15716413
GeneRIF:12565129
GeneRIF:15175114
AD - Alzheimer's disease[accessedResource: SNOMEDCT:26929004][accessDate: 10-05-2010]
GeneRIF:12200623
GeneRIF:15557325
GeneRIF:11771751
GeneRIF:16079207
GeneRIF:15358178
GeneRIF:15014128
Primary Senile Degenerative Dementia
SNOMEDCT:26929004
Dementia in Alzheimer's disease (disorder)
Dementia, Senile[accessedResource: MSH:D000544][accessDate: 10-05-2010]
GeneRIF:15060098
GeneRIF:12505619
GeneRIF:15115757
GeneRIF:12888622
GeneRIF:14746899
GeneRIF:12192622
ALZHEIMER DIS LATE ONSET[accessedResource: MSH:D000544][accessDate: 10-05-2010]
GeneRIF:12445809
GeneRIF:14717705
GeneRIF:12509811
GeneRIF:12242547
GeneRIF:15823754
GeneRIF:12815750
GeneRIF:12876480
FOCAL ONSET ALZHEIMERS DIS
Primary Senile Degenerative Dementia[accessedResource: MSH:D000544][accessDate: 10-05-2010]
GeneRIF:15193763
NCIt:C2866
GeneRIF:11826038
GeneRIF:15953364
GeneRIF:15893372
GeneRIF:14688411
Early Onset Alzheimer Disease[accessedResource: MSH:D000544][accessDate: 10-05-2010]
GeneRIF:15917098
GeneRIF:15546861
GeneRIF:15956169
Alzheimers disease
GeneRIF:16101387
GeneRIF:12626500
GeneRIF:12928512
Dementia in Alzheimer's disease (disorder)[accessedResource: DOID:10652][accessDate: 10-05-2010]
Dementia in Alzheimer's disease, unspecified (disorder)[accessedResource: DOID:10652][accessDate: 10-05-2010]
GeneRIF:12408226
GeneRIF:12200143
GeneRIF:12009501
GeneRIF:15070964
GeneRIF:15781969
GeneRIF:16098202
GeneRIF:14637088
GeneRIF:12098640
GeneRIF:16102903
GeneRIF:12080182
GeneRIF:15759131
GeneRIF:12759460
Dementia in Alzheimer's disease, unspecified (disorder)
GeneRIF:15732116
GeneRIF:11837744
GeneRIF:15708437
GeneRIF:9701251
GeneRIF:12873803
GeneRIF:12417381
GeneRIF:15452128
GeneRIF:11992568
GeneRIF:12527400
GeneRIF:15068254
Acute Confusional Senile Dementia[accessedResource: MSH:D000544][accessDate: 10-05-2010]
GeneRIF:14978286
GeneRIF:12650976
GeneRIF:15770150
GeneRIF:15365176
GeneRIF:12070657
ALZHEIMER DIS
GeneRIF:15601849
GeneRIF:14739533
Alzheimer's Dementia
Alzheimers[accessedResource: NIFSTD:birnlex_2092][accessDate: 10-05-2010]
GeneRIF:15034766
GeneRIF:12882323
GeneRIF:12972157
[X]Dementia in Alzheimer's disease
GeneRIF:12928053
Alzheimers disease[accessedResource: NIFSTD:birnlex_2092][accessDate: 10-05-2010]
AD[accessedResource: DOID:10652][accessDate: 10-05-2010]
GeneRIF:15192701
GeneRIF:15737439
GeneRIF:14625044
GeneRIF:14722078
GeneRIF:15453269
GeneRIF:11831556
GeneRIF:12824768
GeneRIF:12149413
GeneRIF:12895443
GeneRIF:15048650
GeneRIF:14739536
GeneRIF:11940690
DAT - Dementia Alzheimer's type
GeneRIF:12111440
[X]Dementia in Alzheimer's disease, unspecified[accessedResource: SNOMEDCT:192164001][accessDate: 10-05-2010]
GeneRIF:12809550
SNOMEDCT:192164001
GeneRIF:15776278
GeneRIF:11971084
GeneRIF:12107813
Focal Onset Alzheimer's Disease[accessedResource: MSH:D000544][accessDate: 10-05-2010]
Tomasz Adamusiak
GeneRIF:16150694
GeneRIF:15375590
GeneRIF:12641733
Dementia of the Alzheimer's type
GeneRIF:15050722
GeneRIF:15355315
GeneRIF:12707938
GeneRIF:15456940
GeneRIF:12177374
GeneRIF:12127670
GeneRIF:15106853
GeneRIF:14521990
GeneRIF:12459318
GeneRIF:11771749
GeneRIF:12614934
GeneRIF:15211644
GeneRIF:12770691
GeneRIF:12111806
GeneRIF:15975076
Acute Confusional Senile Dementia
GeneRIF:15094456
GeneRIF:15621017
Dementia in Alzheimer's disease[accessedResource: SNOMEDCT:192160005][accessDate: 10-05-2010]
GeneRIF:12508915
GeneRIF:12112084
GeneRIF:12387451
GeneRIF:14663182
GeneRIF:11939591
GeneRIF:12876460
GeneRIF:11847218
GeneRIF:15178951
GeneRIF:15313836
GeneRIF:12133495
GeneRIF:15059642
GeneRIF:12600719
GeneRIF:14701757
Senile Dementias[accessedResource: MSH:D000544][accessDate: 10-05-2010]
Dementia in Alzheimer's disease
ALZHEIMER DIS[accessedResource: MSH:D000544][accessDate: 10-05-2010]
GeneRIF:12117364
GeneRIF:12707937
Alzheimer Type Dementia[accessedResource: MSH:D000544][accessDate: 10-05-2010]
GeneRIF:12480749
GeneRIF:12960780
GeneRIF:15509549
GeneRIF:15184629
MSH:D000544
Alzheimer Senile Dementia[accessedResource: NIFSTD:birnlex_2092][accessDate: 10-05-2010]
GeneRIF:14985339
GeneRIF:15236409
GeneRIF:12787059
ALZHEIMERS DIS
GeneRIF:12499843
GeneRIF:15465084
Alzheimer's Disease, Focal Onset
GeneRIF:15068244
Alzheimer Dementia
GeneRIF:12796468
ALZHEIMERS DIS FOCAL ONSET[accessedResource: MSH:D000544][accessDate: 10-05-2010]
GeneRIF:12645087
GeneRIF:16111477
GeneRIF:12417379
GeneRIF:11841602
GeneRIF:12891359
Alzheimer's disease, NOS
GeneRIF:11552008
GeneRIF:15837559
GeneRIF:16116430
GeneRIF:12535780
[X]Dementia in Alzheimer's disease (disorder)[accessedResource: SNOMEDCT:192160005][accessDate: 10-05-2010]
GeneRIF:15610181
GeneRIF:12460603
GeneRIF:15082191
GeneRIF:12175481
GeneRIF:12032152
GeneRIF:15931081
GeneRIF:15255950
GeneRIF:15882808
GeneRIF:15203119
GeneRIF:14739535
GeneRIF:16002400
GeneRIF:15944016
GeneRIF:14661818
GeneRIF:15075440
Presenile Alzheimer Dementia[accessedResource: MSH:D000544][accessDate: 10-05-2010]
GeneRIF:16116115
GeneRIF:11936240
GeneRIF:14991845
GeneRIF:15026113
Senile Dementia
GeneRIF:12151789
GeneRIF:12499840
GeneRIF:15567486
GeneRIF:12605101
GeneRIF:12499050
GeneRIF:15034937
GeneRIF:14757935
GeneRIF:11756426
GeneRIF:16098915
GeneRIF:13678670
[X]Dementia in Alzheimer's disease[accessedResource: SNOMEDCT:192160005][accessDate: 10-05-2010]
GeneRIF:15228592
GeneRIF:12483461
GeneRIF:12742739
GeneRIF:15056725
GeneRIF:15167696
GeneRIF:15123740
GeneRIF:15207261
Senile Dementia, Alzheimer Type
GeneRIF:12565837
GeneRIF:12459519
GeneRIF:12401548
A dementia which is an incurable disease of unknown cause, starting in late middle age or in old age, that results in progressive memory loss, impaired thinking, disorientation, and changes in personality and mood, that leads in advanced cases to a profound decline in cognitive and physical functioning, and that is marked histologically by the degeneration of brain neurons especially in the cerebral cortex and by the presence of neurofibrillary tangles and plaques containing beta-amyloid.
GeneRIF:12969266
Alzheimer's disease (disorder)
Presenile Alzheimer Dementia
GeneRIF:12109594
GeneRIF:15699049
GeneRIF:12740599
GeneRIF:16023140
GeneRIF:16286548
GeneRIF:12702875
GeneRIF:11840502
Presenile Dementia[accessedResource: MSH:D000544][accessDate: 10-05-2010]
DAT - Dementia Alzheimer's type[accessedResource: SNOMEDCT:192160005][accessDate: 10-05-2010]
AD - Alzheimer's disease
Alzheimer's Disease Pathway
ALZHEIMER DIS EARLY ONSET[accessedResource: MSH:D000544][accessDate: 10-05-2010]
GeneRIF:15338333
GeneRIF:15084795
GeneRIF:12226093
GeneRIF:11849768
GeneRIF:14708344
GeneRIF:12876265
GeneRIF:15016430
GeneRIF:12697290
Dementias, Senile
GeneRIF:12025816
GeneRIF:12707936
GeneRIF:15485486
GeneRIF:12531514
GeneRIF:15193429
GeneRIF:15745979
GeneRIF:15024730
GeneRIF:14614898
GeneRIF:12727335
GeneRIF:14515137
GeneRIF:12807433
GeneRIF:12514700
GeneRIF:15277615
GeneRIF:11927634
GeneRIF:15364413
GeneRIF:15860461
GeneRIF:12939405
GeneRIF:15068237
GeneRIF:12023056
GeneRIF:15313842
GeneRIF:15053964
GeneRIF:12555245
GeneRIF:15087549
GeneRIF:11905990
GeneRIF:15967987
GeneRIF:15331147
GeneRIF:16027741
GeneRIF:11278808
GeneRIF:12551918
GeneRIF:15577914
GeneRIF:12807963
GeneRIF:11837743
GeneRIF:15860464
GeneRIF:12422374
GeneRIF:12147333
GeneRIF:12438920
GeneRIF:12509807
A progressive, neurodegenerative disease characterized by loss of function and death of nerve cells in several areas of the brain leading to loss of cognitive function such as memory and language.[accessedResource: NCIt:C2866][accessDate: 10-05-2010]
GeneRIF:14991457
GeneRIF:16000144
GeneRIF:15091317
GeneRIF:15155565
GeneRIF:15585340
Dementia of the Alzheimer's type[accessedResource: DOID:10652][accessDate: 10-05-2010]
GeneRIF:11771746
GeneRIF:14519529
GeneRIF:12145324
A progressive, neurodegenerative disease characterized by loss of function and death of nerve cells in several areas of the brain leading to loss of cognitive function such as memory and language.
Alzheimer Dementia[accessedResource: NIFSTD:birnlex_2092][accessDate: 10-05-2010]
GeneRIF:12362316
ICD9:331.0
GeneRIF:15804423
GeneRIF:12627474
GeneRIF:15144856
GeneRIF:12218659
GeneRIF:11592857
GeneRIF:11831025
GeneRIF:12692477
GeneRIF:16181410
GeneRIF:12694406
GeneRIF:15370375
GeneRIF:14675603
GeneRIF:14639046
GeneRIF:12928052
GeneRIF:12816543
A degenerative disease of the BRAIN characterized by the insidious onset of DEMENTIA. Impairment of MEMORY, judgment, attention span, and problem solving skills are followed by severe APRAXIAS and a global loss of cognitive abilities. The condition primarily occurs after age 60, and is marked pathologically by severe cortical atrophy and the triad of SENILE PLAQUES; NEUROFIBRILLARY TANGLES; and NEUROPIL THREADS. (From Adams et al., Principles of Neurology, 6th ed, pp1049-57)[accessedResource: MSH:D000544][accessDate: 10-05-2010]
GeneRIF:12893422
GeneRIF:15342129
GeneRIF:12489797
GeneRIF:15596614
Alzheimer Type Senile Dementia[accessedResource: MSH:D000544][accessDate: 10-05-2010]
[X]Dementia in Alzheimer's disease, unspecified
GeneRIF:12084708
GeneRIF:15755860
GeneRIF:16231093
GeneRIF:11920850
GeneRIF:14523088
ALZHEIMERS DIS[accessedResource: MSH:D000544][accessDate: 10-05-2010]
GeneRIF:12914969
GeneRIF:15106847
GeneRIF:12408231
GeneRIF:12068009
GeneRIF:15802910
[X]Dementia in Alzheimer's disease, unspecified (disorder)
Dementia, Presenile
Presenile Dementias[accessedResource: MSH:D000544][accessDate: 10-05-2010]
GeneRIF:12221172
[X]Dementia in Alzheimer's disease (disorder)
GeneRIF:15030408
GeneRIF:11897170
GeneRIF:14761950
GeneRIF:15804918
GeneRIF:12859671
GeneRIF:12890766
GeneRIF:12609057
GeneRIF:15013567
GeneRIF:15975077
GeneRIF:15522224
GeneRIF:12824062
GeneRIF:14765129
GeneRIF:12223024
Alzheimer's Dementia[accessedResource: NCIt:C2866][accessDate: 10-05-2010]
GeneRIF:12486154
genotyping by high throughput sequencing
SK-MEL-2
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158864&type=germplasm
CS57840 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158864&type=germplasm
CS57840
James Malone
RGD:1581618
Okamoto-Aoki
James Malone
Angioimmunoblastic Lymphadenopathy[accessedResource: NCIt:C7528][accessDate: 10-05-2010]
Angioimmunoblastic Lymphadenopathy Type T-Cell Lymphoma[accessedResource: NCIt:C7528][accessDate: 10-05-2010]
Angioimmunoblastic Lymphadenopathy
AILT[accessedResource: NCIt:C7528][accessDate: 10-05-2010]
A mature T-cell non-Hodgkin lymphoma, characterized by systemic disease and a polymorphous infiltrate involving lymph nodes. It occurs in the middle aged and elderly, with an equal incidence in males and females. The clinical course is typically aggressive. (WHO, 2001)
Angioimmunoblastic Lymphadenopathy Type T-Cell Lymphoma
AILD[accessedResource: NCIt:C7528][accessDate: 10-05-2010]
angioimmunoblastic T-cell lymphoma
A mature T-cell non-Hodgkin lymphoma, characterized by systemic disease and a polymorphous infiltrate involving lymph nodes. It occurs in the middle aged and elderly, with an equal incidence in males and females. The clinical course is typically aggressive. (WHO, 2001)[accessedResource: NCIt:C7528][accessDate: 10-05-2010]
Angioimmunoblastic Lymphadenopathy with Dysproteinemia
AILD
Angioimmunoblastic Lymphadenopathy with Dysproteinemia[accessedResource: NCIt:C7528][accessDate: 10-05-2010]
NCIt:C7528
James Malone
AILT
C. elegans
http://www.ebi.ac.uk/efo/EFO_0002636
Caenorhabditis elegans is a free-living, transparent nematode (roundworm), about 1 mm in length, which lives in temperate soil environments
Caenorhabditis elegans
James Malone
Tomasz Adamusiak
FMAID:67681
Pancreatic ductal epithelium[accessedResource: FMAID:67681][accessDate: 10-05-2010]
Epithelium of pancreatic duct[accessedResource: FMAID:67681][accessDate: 10-05-2010]
Jie Zheng
Epithelium of pancreatic duct
Pancreatic ductal epithelium
pancreatic duct epithelium
http://www.ebi.ac.uk/efo/EFO_0001466
C15H10Cl2N2O2
lonidamine
lonidaminum
diclondazolic acid
InChIKey=WDRYRZXSPDWGEB-UYBDAZJACL
Lonidamin
Doridamina
InChI=1/C15H10Cl2N2O2/c16-10-6-5-9(12(17)7-10)8-19-13-4-2-1-3-11(13)14(18-19)15(20)21/h1-7H,8H2,(H,20,21)/f/h20H
CHEBI:50138
1-(2,4-dichlorobenzyl)-1H-indazole-3-carboxylic acid
DICA
1-(2,4-dichlorbenzyl)-indazole-3-carboxylic acid
OC(=O)c1nn(Cc2ccc(Cl)cc2Cl)c2ccccc12
lonidamina
An indazole that has formula C15H10Cl2N2O2.
James Malone
Ele Holloway
CMLT1
http://en.wikipedia.org/wiki/Ovulation
cumulus-oocyte complex
Tomasz Adamusiak
FBbt:00000489
dorsal prothoracic pharyngeal muscle
James Malone
GM12750
James Malone
Granuloma, Hodgkins
Hodgkins Diseases[accessedResource: MSH:D006689][accessDate: 10-05-2010]
Hodgkin Lymphoma[accessedResource: MSH:D006689][accessDate: 10-05-2010]
Hodgkin's disease of lymph nodes of multiple sites (disorder)
Hodgkin's disease NOS (disorder)
GeneRIF:15638381
HODGKIN DIS[accessedResource: MSH:D006689][accessDate: 10-05-2010]
Hodgkin's disease of spleen (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease NOS, unspecified site (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Malignant Granuloma[accessedResource: MSH:D006689][accessDate: 10-05-2010]
Hodgkin's disease of intrathoracic lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's sarcoma (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
HODGKINS DIS[accessedResource: MSH:D006689][accessDate: 10-05-2010]
GeneRIF:11855781
Hodgkin's disease, unspecified type, involving lymph nodes of inguinal region and lower limb[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease, unspecified type, involving lymph nodes of axilla and upper limb
Hodgkin's disease NOS of intrathoracic lymph nodes (disorder)
A malignant disease characterized by progressive enlargement of the lymph nodes, spleen, and general lymphoid tissue. In the classical variant, giant usually multinucleate Hodgkin's and REED-STERNBERG CELLS are present; in the nodular lymphocyte predominant variant, lymphocytic and histiocytic cells are seen.[accessedResource: MSH:D006689][accessDate: 10-05-2010]
GeneRIF:15912144
GeneRIF:12478664
GeneRIF:12609061
GeneRIF:12969974
Hodgkin's disease NOS of lymph nodes of axilla and upper limb (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
GeneRIF:12152987
Hodgkin's disease of intrapelvic lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
GeneRIF:12091121
DOID:8567
Hodgkin's disease, unspecified type, unspecified site, extranodal and solid organ sites
stage II Subdiaphragmatic Hodgkin Lymphoma[accessedResource: DOID:8567][accessDate: 10-05-2010]
ICD9:201
Hodgkin's sarcoma NOS (disorder)
GeneRIF:16108827
Hodgkin's disease, unspecified type, involving intra-abdominal lymph nodes
Hodgkin's disease NOS of lymph nodes of multiple sites (disorder)
GeneRIF:15526025
Lymphogranuloma, malignant (morphologic abnormality)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease NOS (morphologic abnormality)
ICD9:201.9
GeneRIF:12389614
GeneRIF:12456498
GeneRIF:12011765
Splenic Hodgkins Lymphoma
Hodgkin's disease, unspecified type
GeneRIF:11839577
Disease, Hodgkin's
Lymphogranuloma, malignant (morphologic abnormality)
GeneRIF:14654080
Hodgkin's disease (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Disease, Hodgkin[accessedResource: MSH:D006689][accessDate: 10-05-2010]
Hodgkin's disease, unspecified type, involving spleen[accessedResource: DOID:8567][accessDate: 10-05-2010]
GeneRIF:15933052
Hodgkin's sarcoma of unspecified site (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkins lymphoma
GeneRIF:12875982
A malignant disease characterized by progressive enlargement of the lymph nodes, spleen, and general lymphoid tissue. In the classical variant, giant usually multinucleate Hodgkin's and REED-STERNBERG CELLS are present; in the nodular lymphocyte predominant variant, lymphocytic and histiocytic cells are seen.
Granuloma, Hodgkin[accessedResource: MSH:D006689][accessDate: 10-05-2010]
Hodgkin's Lymphomas
GeneRIF:11956621
Hodgkin's disease NOS of intrathoracic lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's sarcoma of unspecified site (disorder)
Hodgkin sarcoma [obs]
Hodgkin's disease NOS of spleen (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease, unspecified type, involving spleen
GeneRIF:12824192
Hodgkin's lymphoma NOS
GeneRIF:12070005
GeneRIF:15585627
GeneRIF:15551733
Malignant Lymphogranuloma
HL[accessedResource: DOID:8567][accessDate: 10-05-2010]
GeneRIF:14645011
GeneRIF:14961078
GeneRIF:16123212
Hodgkin's disease, unspecified type, involving lymph nodes of axilla and upper limb[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease, unspecified type, involving intrapelvic lymph nodes[accessedResource: DOID:8567][accessDate: 10-05-2010]
GeneRIF:14959851
GeneRIF:12389626
GeneRIF:11830502
Hodgkin's disease NOS of lymph nodes of head, face and neck (disorder)
MSH:D006689
GeneRIF:15105810
Hodgkin's disease, unspecified type, involving lymph nodes of head, face and neck
Hodgkin's Lymphoma stage III
Hodgkin's disease of lymph nodes of axilla AND/OR upper limb (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Granuloma, Hodgkin
Hodgkin's disease of lymph nodes of head, face and/or neck (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease NOS of lymph nodes of inguinal region and lower limb (disorder)
GeneRIF:15712176
Hodgkin's disease of lymph nodes of inguinal region and/or lower limb (disorder)
GeneRIF:11929801
Hodgkins Diseases
Hodgkin's disease NOS[accessedResource: DOID:8567][accessDate: 10-05-2010]
lymphogranulomatosis
Splenic Hodgkins Lymphoma[accessedResource: DOID:8567][accessDate: 10-05-2010]
stage I Subdiaphragmatic Hodgkin Lymphoma[accessedResource: DOID:8567][accessDate: 10-05-2010]
GeneRIF:14959852
Hodgkin's sarcoma[accessedResource: DOID:8567][accessDate: 10-05-2010]
Disease, Hodgkins[accessedResource: MSH:D006689][accessDate: 10-05-2010]
Hodgkin's disease NOS (morphologic abnormality)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease NOS of lymph nodes of head, face and neck (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's sarcoma (disorder)
Hodgkin's sarcoma NOS (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's Lymphoma stage III[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's lymphoma NOS[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease NOS of lymph nodes of axilla and upper limb (disorder)
GeneRIF:11986952
GeneRIF:11839668
Hodgkin's disease NOS of lymph nodes of inguinal region and lower limb (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
GeneRIF:12594824
Lymphogranulomas, Malignant[accessedResource: MSH:D006689][accessDate: 10-05-2010]
Hodgkin's disease, unspecified type, involving intrapelvic lymph nodes
Malignant Granulomas
stage I Subdiaphragmatic Hodgkin Lymphoma
GeneRIF:12145210
Hodgkin's disease NOS of lymph nodes of multiple sites (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
GeneRIF:12038453
Hodgkin's disease, unspecified type, involving lymph nodes of multiple sites
Hodgkin's disease (disorder)
Hodgkin's disease NOS of intra-abdominal lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease, unspecified type, involving intrathoracic lymph nodes
Hodgkin's disease of spleen (disorder)
HODGKIN DIS
Hodgkin's disease of lymph nodes of head, face AND/OR neck (disorder)
Hodgkin's disease of intra-abdominal lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease, unspecified type, involving lymph nodes of head, face and neck[accessedResource: DOID:8567][accessDate: 10-05-2010]
GeneRIF:15291355
HL
Malignant Granulomas[accessedResource: MSH:D006689][accessDate: 10-05-2010]
Hodgkin's disease, unspecified type, involving intrathoracic lymph nodes[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease NOS of intra-abdominal lymph nodes (disorder)
GeneRIF:12429802
Hodgkin lymphoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease of intra-abdominal lymph nodes (disorder)
GeneRIF:12174874
GeneRIF:12393409
Hodgkin sarcoma [obs][accessedResource: DOID:8567][accessDate: 10-05-2010]
GeneRIF:15120936
Hodgkin's disease of intrathoracic lymph nodes (disorder)
Hodgkin disease
Hodgkin's disease NOS
lymphogranulomatosis[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease NOS of intrapelvic lymph nodes (disorder)
Hodgkin lymphoma, no ICD-O subtype (morphologic abnormality)
Hodgkin's disease of lymph nodes of multiple sites (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease, unspecified type, involving lymph nodes of inguinal region and lower limb
GeneRIF:14962256
Hodgkin's sarcoma
HODGKINS DIS
Hodgkin's Lymphomas[accessedResource: MSH:D006689][accessDate: 10-05-2010]
Granuloma, Malignant
Lymphoma, Hodgkin
GeneRIF:12431239
GeneRIF:15772702
Hodgkin's disease, unspecified type, involving intra-abdominal lymph nodes[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkins Lymphoma
stage II Subdiaphragmatic Hodgkin Lymphoma
Hodgkin's disease NOS of intrapelvic lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
James Malone
Lymphogranuloma, Malignant[accessedResource: MSH:D006689][accessDate: 10-05-2010]
GeneRIF:15026356
Hodgkins Lymphoma[accessedResource: MSH:D006689][accessDate: 10-05-2010]
Hodgkin's disease of lymph nodes of axilla AND/OR upper limb (disorder)
GeneRIF:15556690
Hodgkin's disease NOS (& [lymphogranuloma malignant])
ICD9:201.2
GeneRIF:15796964
Hodgkin's disease NOS (& [lymphogranuloma malignant])[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease NOS (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease, unspecified type, involving lymph nodes of multiple sites[accessedResource: DOID:8567][accessDate: 10-05-2010]
Malignant Lymphogranulomas
Hodgkin's disease of intrapelvic lymph nodes (disorder)
Hodgkin's Granuloma[accessedResource: MSH:D006689][accessDate: 10-05-2010]
Hodgkin's disease of lymph nodes of inguinal region AND/OR lower limb (disorder)[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease NOS, unspecified site (disorder)
Hodgkin's disease, unspecified type, unspecified site, extranodal and solid organ sites[accessedResource: DOID:8567][accessDate: 10-05-2010]
Hodgkin's disease NOS of spleen (disorder)
CHEBI:153671
http://www.ebi.ac.uk/efo/EFO_0002728
endothelin-1
Tomasz Adamusiak
Ele Holloway
rat cell line
An assay in which an array is used detect polymorphisms in DNA samples
genotyping by array
MAT:0000349
BTO:0000537
A sweet liquid that is secreted by the nectaries of a plant and is the chief raw material of honey.
A sweet liquid that is secreted by the nectaries of a plant and is the chief raw material of honey.[accessedResource: BTO:0000537][accessDate: 10-05-2010]
nectar
James Malone
NCIt:C37364
BTBR
BTBR[accessedResource: NCIt:C37364][accessDate: 10-05-2010]
BTBR mouse
Tomasz Adamusiak
Jie Zheng
James Malone
CHEBI:35717
sedative drug
hypnotics and sedatives
http://www.ebi.ac.uk/efo/EFO_0001854
hypnotics
sedatives
A drug used to induce drowsiness or sleep or to reduce psychological excitement or anxiety.
MO_384
radiotherapy
The current clinical treatment(s) of the patient from which the biosource is derived. E.g. radiotherapy
clinical treatment
Tomasz Adamusiak
Jie Zheng
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158899&type=germplasm
CS57875 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158899&type=germplasm
CS57875
James Malone
Heterogeneous group of arthritic diseases sharing clinical and radiologic features. They are associated with the HLA-B27 ANTIGEN and some with a triggering infection. Most involve the axial joints in the SPINE, particularly the SACROILIAC JOINT, but can also involve asymmetric peripheral joints. Subsets include ANKYLOSING SPONDYLITIS; REACTIVE ARTHRITIS; PSORIATIC ARTHRITIS; and others.
Spondylarthropathy[accessedResource: MSH:D025242][accessDate: 10-05-2010]
Spondylosis (disorder)
Spondarthropathy[accessedResource: SNOMEDCT:8847002][accessDate: 10-05-2010]
Spondylarthropathies[accessedResource: MSH:D025242][accessDate: 10-05-2010]
Spondylosis of unspecified site without mention of myelopathy[accessedResource: ICD9:721.90][accessDate: 10-05-2010]
SNOMEDCT:372109003
SPONDYLOS NOS W/O MYELOP
JOINT DIS NOS-OTH JT[accessedResource: ICD9:719.98][accessDate: 10-05-2010]
Spondyloarthropathy (disorder)[accessedResource: SNOMEDCT:372109003][accessDate: 10-05-2010]
Disorder of joint of spine
Spondylarthrosis, NOS
Spondylosis of unspecified site without mention of myelopathy
Spondyloarthropathy (disorder)
Disorder of joint of spine[accessedResource: SNOMEDCT:372109003][accessDate: 10-05-2010]
GeneRIF:14558097
Spondylosis (disorder)[accessedResource: SNOMEDCT:8847002][accessDate: 10-05-2010]
spondyloarthropathy
Spondylosis, NOS
Spondylarthrosis
ICD9:719.98
OA - Osteoarthritis of the spine
ICD9:721.90
Spondylarthropathy
OA - Osteoarthritis of the spine[accessedResource: SNOMEDCT:8847002][accessDate: 10-05-2010]
Disorder of joint of spine (disorder)
Disorder of joint of spine (disorder)[accessedResource: SNOMEDCT:372109003][accessDate: 10-05-2010]
Osteoarthritis of spine
Spondylarthrosis, NOS[accessedResource: SNOMEDCT:8847002][accessDate: 10-05-2010]
Osteoarthritis of spine[accessedResource: SNOMEDCT:8847002][accessDate: 10-05-2010]
Unspecified joint disorder of other specified sites
JOINT DIS NOS-OTH JT
SPONDYLOS NOS W/O MYELOP[accessedResource: ICD9:721.90][accessDate: 10-05-2010]
Heterogeneous group of arthritic diseases sharing clinical and radiologic features. They are associated with the HLA-B27 ANTIGEN and some with a triggering infection. Most involve the axial joints in the SPINE, particularly the SACROILIAC JOINT, but can also involve asymmetric peripheral joints. Subsets include ANKYLOSING SPONDYLITIS; REACTIVE ARTHRITIS; PSORIATIC ARTHRITIS; and others.[accessedResource: MSH:D025242][accessDate: 10-05-2010]
Spondylosis
MSH:D025242
OA - Osteoarthritis of spine[accessedResource: SNOMEDCT:8847002][accessDate: 10-05-2010]
Spondylosis[accessedResource: SNOMEDCT:8847002][accessDate: 10-05-2010]
Spondylarthropathies
GeneRIF:12115249
Spondylarthrosis[accessedResource: SNOMEDCT:8847002][accessDate: 10-05-2010]
SNOMEDCT:8847002
James Malone
Spondarthropathy
GeneRIF:15146432
Spondylosis, NOS[accessedResource: SNOMEDCT:8847002][accessDate: 10-05-2010]
Unspecified joint disorder of other specified sites[accessedResource: ICD9:719.98][accessDate: 10-05-2010]
DOID:1123
OA - Osteoarthritis of spine
http://www.arabidopsis.org/servlets/TairObject?id=1005158920&type=germplasm
CS57896 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158920&type=germplasm
CS57896
James Malone
NCIt:C8936
B-precursor acute lymphoblastic leukemia
James Malone
B Lymphoblastic Leukemia/Lymphoma[accessedResource: NCIt:C8936][accessDate: 10-05-2010]
DOID:7061
B-ALL
Precursor B Lymphoblastic Leukemia/Lymphoma
Precursor B Lymphoblastic Leukemia/Lymphoma[accessedResource: NCIt:C8936][accessDate: 10-05-2010]
B Lymphoblastic Leukemia/Lymphoma
A neoplasm of lymphoblasts committed to the B-cell lineage, typically composed of small to medium-sized blast cells. When the neoplasm involves predominantly the bone marrow and the peripheral blood, it is called precursor B lymphoblastic leukemia (B-cell acute lymphoblastic leukemia). When it involves nodal or extranodal sites, it is called B lymphoblastic lymphoma. (WHO, 2001) -- 2003[accessedResource: NCIt:C8936][accessDate: 10-05-2010]
B-cell acute lymphoblastic leukemia
A neoplasm of lymphoblasts committed to the B-cell lineage, typically composed of small to medium-sized blast cells. When the neoplasm involves predominantly the bone marrow and the peripheral blood, it is called precursor B lymphoblastic leukemia (B-cell acute lymphoblastic leukemia). When it involves nodal or extranodal sites, it is called B lymphoblastic lymphoma. (WHO, 2001) -- 2003
GM07345
James Malone
[X]Unspecified malaria (disorder)
GeneRIF:15691125
malaria
Induced malaria (disorder)[accessedResource: DOID:12365][accessDate: 10-05-2010]
GeneRIF:15272009
SNOMEDCT:105649009
GeneRIF:12626578
GeneRIF:15322007
Disease due to Plasmodiidae
A protozoan infection caused by the genus Plasmodium. There are four species of Plasmodium that can infect humans: Plasmodium falciparum, vivax, ovale, and malariae. It is transmitted to humans by infected mosquitoes. Signs and symptoms include paroxysmal high fever, sweating, chills, and anemia.[accessedResource: NCIt:C34797][accessDate: 10-05-2010]
SNOMEDCT:186797008
Unspecified malaria[accessedResource: SNOMEDCT:186797008][accessDate: 10-05-2010]
Other malaria
Other malaria[accessedResource: ICD9:084.4][accessDate: 10-05-2010]
GeneRIF:15931230
GeneRIF:15724813
Malaria (disorder)
Other malaria (disorder)
GeneRIF:14694201
MALARIA NEC[accessedResource: ICD9:084.4][accessDate: 10-05-2010]
Other pernicious complications of malaria
MALARIA NEC
MALARIA NOS
GeneRIF:11668637
GeneRIF:12140747
Malarial fever (finding)
GeneRIF:12125143
GeneRIF:12738632
GeneRIF:15634900
GeneRIF:12654089
MALARIA COMPLICATED NEC[accessedResource: ICD9:084.9][accessDate: 10-05-2010]
Induced malaria (disorder)
SNOMEDCT:61462000
Unspecified malaria (disorder)
GeneRIF:15086902
GeneRIF:14595440
GeneRIF:12574396
MALARIA COMPLICATED NEC
ICD9:084.9
GeneRIF:15845528
induced malaria
An Aconoidasida infectious disease characterized as a vector-borne infectious disease caused by the presence of protozoan parasites of the genus Plasmodium in the red blood cells, transmitted from an infected to an uninfected individual by the bite of anopheline mosquitoes, and characterized by periodic attacks of chills and fever that coincide with mass destruction of blood cells and the release of toxic substances by the parasite at the end of each reproductive cycle.[accessedResource: DOID:12365][accessDate: 10-05-2010]
SNOMEDCT:266121001
GeneRIF:12117997
GeneRIF:15718915
induced malaria[accessedResource: DOID:12365][accessDate: 10-05-2010]
SNOMEDCT:187510004
Disease due to Plasmodiidae (disorder)
Other malaria (disorder)[accessedResource: SNOMEDCT:266121001][accessDate: 10-05-2010]
SNOMEDCT:248437004
[X]Unspecified malaria (disorder)[accessedResource: SNOMEDCT:187510004][accessDate: 10-05-2010]
GeneRIF:14695625
GeneRIF:12933825
GeneRIF:15853902
An Aconoidasida infectious disease characterized as a vector-borne infectious disease caused by the presence of protozoan parasites of the genus Plasmodium in the red blood cells, transmitted from an infected to an uninfected individual by the bite of anopheline mosquitoes, and characterized by periodic attacks of chills and fever that coincide with mass destruction of blood cells and the release of toxic substances by the parasite at the end of each reproductive cycle.
GeneRIF:14767829
GeneRIF:12746397
Plasmodiosis[accessedResource: SNOMEDCT:61462000][accessDate: 10-05-2010]
GeneRIF:15478802
Disease due to Plasmodiidae[accessedResource: SNOMEDCT:105649009][accessDate: 10-05-2010]
Paludism[accessedResource: SNOMEDCT:61462000][accessDate: 10-05-2010]
[X]Unspecified malaria
Other pernicious complications of malaria[accessedResource: ICD9:084.9][accessDate: 10-05-2010]
GeneRIF:15319871
GeneRIF:12486610
Malarial fever
Unspecified malaria (disorder)[accessedResource: SNOMEDCT:186797008][accessDate: 10-05-2010]
GeneRIF:15500919
James Malone
Disease due to Plasmodiidae (disorder)[accessedResource: SNOMEDCT:105649009][accessDate: 10-05-2010]
GeneRIF:11434773
Malaria is a parasitic disease characterized as a vector-borne arthropod infectious acute or chronic disease caused by the presence of sporozoan parasites of the genus Plasmodium in the red blood cells, transmitted from an infected to an uninfected individual by the bite of anopheline mosquitoes, and characterized by periodic attacks of chills and fever that coincide with mass destruction of blood cells and the release of toxic substances by the parasite at the end of each reproductive cycle. Occurrance is widespread in tropical and subtropical regions, including parts of the Americas, Asia, and Africa.
MALARIA NOS[accessedResource: ICD9:084.6][accessDate: 10-05-2010]
NCIt:C34797
Malaria, unspecified
GeneRIF:16113307
Malarial fever[accessedResource: SNOMEDCT:248437004][accessDate: 10-05-2010]
GeneRIF:11971017
ICD9:084
DOID:12365
[X]Unspecified malaria[accessedResource: SNOMEDCT:187510004][accessDate: 10-05-2010]
GeneRIF:15933743
Plasmodiosis
Malaria (disorder)[accessedResource: SNOMEDCT:61462000][accessDate: 10-05-2010]
GeneRIF:12654091
GeneRIF:15383590
ICD9:084.4
GeneRIF:12402212
ICD9:084.6
GeneRIF:15973412
GeneRIF:12496175
Malarial fever (finding)[accessedResource: SNOMEDCT:248437004][accessDate: 10-05-2010]
A protozoan infection caused by the genus Plasmodium. There are four species of Plasmodium that can infect humans: Plasmodium falciparum, vivax, ovale, and malariae. It is transmitted to humans by infected mosquitoes. Signs and symptoms include paroxysmal high fever, sweating, chills, and anemia.
GeneRIF:15211007
Paludism
MAT:0000366
storage organ
James Malone
Toledo
James Malone
Ele Holloway
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Microgram_per_Kilogram_per_Day
ug per kg per day
microgram per kilogram per day
protein kinase C inhibitors
http://www.ebi.ac.uk/efo/EFO_0001859
CHEBI:37700
protein kinase C inhibitor
James Malone
MO_467
3 days post planting
A temporal measurement of the time period elapsed since an identifiable point in the life cycle of an organism. If a developmental stage is specified, the identifiable point would be the beginning of that stage. Otherwise the identifiable point must be specified such as planting (e.g. 3 days post planting).
age
Tomasz Adamusiak
Jie Zheng
James Malone
SW1783
James Malone
Ele Holloway
Chromophobe adenocarcinoma is a renal cell carcinoma described as the third most common type of renal cell carcinoma. The cancerous cells are similar with the clear cells, they appear pale when viewed under microscope, but there are larger and display different features than clear cells. This type of cancer rarely metastasizes, and the tumors can be successfully removed with surgery.
Carcinoma, Collecting Duct (Kidney)
Hypernephromas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
James Malone
Chromophobe carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:1443001][accessDate: 10-05-2010]
Hypernephroid Carcinomas
Chromophobe carcinoma (morphologic abnormality)
Renal Cell Carcinoma, Chromophobe Type
A type of carcinoma that comprises a minority of renal cell carcinomas. It is characterized by loss of chromosomes 1 and Y. Based on the cytoplasmic characteristics of the neoplastic cells, this type of carcinoma is classified as classic (typical) or eosinophilic. It has a much better prognosis than other renal cell carcinomas.[accessedResource: NCIt:C4146][accessDate: 10-05-2010]
Carcinoma, Nephroid
Clear Cell Renal Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophobe adenocarcinoma[accessedResource: SNOMEDCT:1443001][accessDate: 10-05-2010]
Papillary Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophobe Carcinoma of Kidney
Hypernephromas
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophobe adenocarcinoma is a renal cell carcinoma described as the third most common type of renal cell carcinoma. The cancerous cells are similar with the clear cells, they appear pale when viewed under microscope, but there are larger and display different features than clear cells. This type of cancer rarely metastasizes, and the tumors can be successfully removed with surgery.[accessedResource: DOID:4471][accessDate: 10-05-2010]
Carcinoma, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
chromophobe renal cell carcinoma
Renal cell carcinoma, chromophobe cell (morphologic abnormality)
Clear Cell Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophobe Cell Carcinoma of the Kidney
Tumor, Grawitz
Chromophobe Cell Carcinoma of the Kidney[accessedResource: NCIt:C4146][accessDate: 10-05-2010]
SNOMEDCT:1443001
Chromophobe Cell Carcinoma of Kidney
Carcinomas, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal cell carcinoma, chromophobe cell (morphologic abnormality)[accessedResource: SNOMEDCT:128667008][accessDate: 10-05-2010]
Sarcomatoid Renal Cell Carcinoma
Chromophobe carcinoma
Renal Cell Carcinomas
Hypernephroid Carcinoma
Renal Cell Adenocarcinomas
Hypernephroid Carcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
SNOMEDCT:128667008
renal cell carcinoma, chromophobe cell[accessedResource: DOID:4471][accessDate: 10-05-2010]
Hypernephroid Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Adenocarcinoma, Renal Cell
Papillary Renal Cell Carcinoma
DOID:4471
Carcinoma, Renal Cell
Clear Cell Renal Carcinoma
Sarcomatoid Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Cell Carcinoma, Chromophobe Type[accessedResource: NCIt:C4146][accessDate: 10-05-2010]
Adenocarcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophobe Cell Carcinoma of Kidney[accessedResource: NCIt:C4146][accessDate: 10-05-2010]
Chromophobe Carcinoma of Kidney[accessedResource: NCIt:C4146][accessDate: 10-05-2010]
Carcinomas, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
NCIt:C4146
MSH:D002292
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.
A type of carcinoma that comprises a minority of renal cell carcinomas. It is characterized by loss of chromosomes 1 and Y. Based on the cytoplasmic characteristics of the neoplastic cells, this type of carcinoma is classified as classic (typical) or eosinophilic. It has a much better prognosis than other renal cell carcinomas.
Chromophobe carcinoma[accessedResource: SNOMEDCT:1443001][accessDate: 10-05-2010]
Carcinomas, Collecting Duct (Kidney)
Nephroid Carcinomas
Carcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephroma
Tumor, Grawitz[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Duct Carcinoma, Collecting (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophobe Carcinoma of the Kidney
renal cell carcinoma, chromophobe cell
Renal Cell Adenocarcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Collecting Duct Carcinomas (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephroma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophobe Carcinoma of the Kidney[accessedResource: NCIt:C4146][accessDate: 10-05-2010]
Clear Cell Renal Cell Carcinoma
Chromophobe Adenocarcinoma
antepartum peripartum cardiomyopathy
Postpartum cardiomyopathy (disorder)
peripartum cardiomyopathy
Postpartum cardiomyopathy
Puerperal cardiomyopathy[accessedResource: SNOMEDCT:62377009][accessDate: 10-05-2010]
Postpartum cardiomyopathy (disorder)[accessedResource: SNOMEDCT:62377009][accessDate: 10-05-2010]
Postpartum cardiomyopathy[accessedResource: SNOMEDCT:62377009][accessDate: 10-05-2010]
postpartum peripartum cardiomyopathy
Tomasz Adamusiak
antepartum peripartum cardiomyopathy[accessedResource: DOID:9997][accessDate: 10-05-2010]
SNOMEDCT:62377009
Puerperal cardiomyopathy
DOID:9997
postpartum peripartum cardiomyopathy[accessedResource: DOID:9997][accessDate: 10-05-2010]
Genetic traits are small inherited parts of the phenotype of an organism
genetic trait
James Malone
http://jaxmice.jax.org/strain/009272.html
ILSXISS51/TejJ
Tomasz Adamusiak
bulbus olfactorius[accessedResource: ZFA:0000402][accessDate: 10-05-2010]
NCIt:C22619
Segment of neural tree organ which is continuous with a set of olfactory nerves and an olfactory tract.
ZFA:0000402
An anterior projection of each cerebral hemisphere that is continuous anteriorly with the olfactory nerve;nA term applied to the olfactory apparatus on the lower surface of the frontal lobe of the brain. It consists of the olfactory bulb, tract, and trigone.
olfactory lobe
Segment of neural tree organ which is continuous with a set of olfactory nerves and an olfactory tract.[accessedResource: FMAID:77624][accessDate: 10-05-2010]
BTO:0001362
EV:0100173
CNS - Brain - Olfactory Bulb (MMHCC)[accessedResource: NCIt:C22619][accessDate: 10-05-2010]
James Malone
CNS - Brain - Olfactory Bulb (MMHCC)
Olfactory Bulb
Brain structure which is the paired anteriormost part of the telencephalon and are connected to the telencephalon by two tracts carrying secondary olfactory fibers. From Neuroanatomy of the Zebrafish Brain.[accessedResource: ZFA:0000402][accessDate: 10-05-2010]
MAT:0000116
bulbus olfactorius
EMAPA:17778
FMAID:77624
EHDAA:5480
SAEL:75
olfactory bulb[accessedResource: MAT:0000116][accessDate: 10-05-2010]
An anterior projection of each cerebral hemisphere that is continuous anteriorly with the olfactory nerve;nA term applied to the olfactory apparatus on the lower surface of the frontal lobe of the brain. It consists of the olfactory bulb, tract, and trigone.[accessedResource: BTO:0001362][accessDate: 10-05-2010]
Brain structure which is the paired anteriormost part of the telencephalon and are connected to the telencephalon by two tracts carrying secondary olfactory fibers. From Neuroanatomy of the Zebrafish Brain.
true
weight percent
fungicides
http://www.ebi.ac.uk/efo/EFO_0001823
CHEBI:24127
A substance used to destroy fungal pests.
fungicide
James Malone
600MPE
James Malone
CL:0000071
umbilical vein endothelial cell
primary microvascular endothelial cell
primary blood vessel endothelial cell
blood vessel endothelial cell
James Malone
MSH:D005756
Idiopathic erosive/hemorrhagic gastritis (disorder)[accessedResource: DOID:4029][accessDate: 10-05-2010]
GeneRIF:12390304
Erosive gastropathy (disorder)
Gastric catarrh
Inflammation of the stomach.[accessedResource: NCIt:C26780][accessDate: 10-05-2010]
Other specified gastritis, with hemorrhage
Other specified gastritis, without mention of hemorrhage[accessedResource: DOID:4029][accessDate: 10-05-2010]
GeneRIF:14669317
GeneRIF:12671895
GeneRIF:14536000
Gastritis unspecified (disorder)[accessedResource: DOID:4029][accessDate: 10-05-2010]
acute gastritis with hemorrhage
GeneRIF:15287151
Other specified gastritis (disorder)
GeneRIF:16201065
chronic gastritis
Gastritis, NOS
GeneRIF:11908710
acute gastritis, without mention of hemorrhage[accessedResource: DOID:4029][accessDate: 10-05-2010]
GeneRIF:15383700
Hemorrhagic Gastritis[accessedResource: DOID:4029][accessDate: 10-05-2010]
acute Gastritis[accessedResource: DOID:4029][accessDate: 10-05-2010]
acute haemorrhagic gastritis
Gastritides
GeneRIF:12958020
GeneRIF:16275761
NCIt:C26780
Gastric catarrh[accessedResource: SNOMEDCT:4556007][accessDate: 10-05-2010]
DOID:4029
Gastritis [Ambiguous]
Gastritis (disorder)
Erosive Gastritis[accessedResource: DOID:4029][accessDate: 10-05-2010]
Inflammation of the GASTRIC MUCOSA, a lesion observed in a number of unrelated disorders.[accessedResource: MSH:D005756][accessDate: 10-05-2010]
chronic Gastritis[accessedResource: DOID:4029][accessDate: 10-05-2010]
Gastritis unspecified (disorder)
Gastritis [Ambiguous][accessedResource: DOID:4029][accessDate: 10-05-2010]
GeneRIF:16302981
Erosive gastropathy (disorder)[accessedResource: DOID:4029][accessDate: 10-05-2010]
James Malone
Gastritides[accessedResource: MSH:D005756][accessDate: 10-05-2010]
chronic gastritis NOS (disorder)[accessedResource: DOID:4029][accessDate: 10-05-2010]
acute gastric mucosal erosion (disorder)[accessedResource: DOID:4029][accessDate: 10-05-2010]
Gastritis unspecified
Idiopathic erosive/hemorrhagic gastritis (disorder)
GeneRIF:15351034
GeneRIF:15216464
GeneRIF:15720413
GeneRIF:12011009
Other specified gastritis
Other specified gastritis NOS (disorder)
chronic gastritis (disorder)[accessedResource: DOID:4029][accessDate: 10-05-2010]
Gastritis (disorder)[accessedResource: SNOMEDCT:4556007][accessDate: 10-05-2010]
acute haemorrhagic gastritis[accessedResource: DOID:4029][accessDate: 10-05-2010]
Other specified gastritis NOS (disorder)[accessedResource: DOID:4029][accessDate: 10-05-2010]
Hemorrhagic Gastritis
Other specified gastritis, without mention of hemorrhage
Inflammation of the GASTRIC MUCOSA, a lesion observed in a number of unrelated disorders.
chronic gastritis (disorder)
GeneRIF:12519893
acute Gastritis
Other specified gastritis, with hemorrhage[accessedResource: DOID:4029][accessDate: 10-05-2010]
active gastritis
Gastritis, NOS[accessedResource: SNOMEDCT:4556007][accessDate: 10-05-2010]
Other specified gastritis[accessedResource: DOID:4029][accessDate: 10-05-2010]
acute gastritis with hemorrhage[accessedResource: DOID:4029][accessDate: 10-05-2010]
SNOMEDCT:196743006
Erosive Gastritis
acute hemorrhagic gastritis (disorder)
Inflammation of the stomach.
chronic gastritis NOS (disorder)
acute hemorrhagic gastritis (disorder)[accessedResource: DOID:4029][accessDate: 10-05-2010]
acute gastric mucosal erosion (disorder)
acute gastritis (disorder)
acute gastritis, without mention of hemorrhage
acute hemorrhagic gastritis [dup] (disorder)
gastritis
acute gastritis (disorder)[accessedResource: DOID:4029][accessDate: 10-05-2010]
Gastritis[accessedResource: MSH:D005756][accessDate: 10-05-2010]
Gastritis unspecified[accessedResource: SNOMEDCT:196743006][accessDate: 10-05-2010]
acute hemorrhagic gastritis [dup] (disorder)[accessedResource: DOID:4029][accessDate: 10-05-2010]
Other specified gastritis (disorder)[accessedResource: DOID:4029][accessDate: 10-05-2010]
GeneRIF:12488564
SNOMEDCT:4556007
bicuculline
C20H17NO6
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0002725
Tomasz Adamusiak
[H][C@]1(OC(=O)c2c3OCOc3ccc12)[C@@]1([H])N(C)CCc2cc3OCOc3cc12
CHEBI:3092
(6R)-6-[(5S)-6-methyl-5,6,7,8-tetrahydro[1,3]dioxolo[4,5-g]isoquinolin-5-yl]furo[3,4-e][1,3]benzodioxol-8(6H)-one
Bicucullin
InChI=1/C20H17NO6/c1-21-5-4-10-6-14-15(25-8-24-14)7-12(10)17(21)18-11-2-3-13-19(26-9-23-13)16(11)20(22)27-18/h2-3,6-7,17-18H,4-5,8-9H2,1H3/t17-,18+/m0/s1
Bicuculline is a light-sensitive competitive antagonist of GABAA receptors. It was originally identified in 1932 in plant alkaloid extracts and has been isolated from Dicentra cucullaria, Adlumia fungosa, Fumariaceae, and several Corydalis species.
d-Bicuculline
Bicculine
InChIKey=IYGYMKDQCDOMRE-ZWKOTPCHBP
SUM44PE
James Malone
3,5,3'-Triiodothyronine
liothyronine
L-T3
L-3,5,3'-Triiodothyronine
C15H12I3NO4
CHEBI:18258
Tresitope
http://www.ebi.ac.uk/efo/EFO_0002395
4-(4-hydroxy-3-iodophenoxy)-3,5-diiodo-L-phenylalanine
liothyroninum
An iodothyronine that has formula C15H12I3NO4.
triiodothyronine
InChI=1/C15H12I3NO4/c16-9-6-8(1-2-13(9)20)23-14-10(17)3-7(4-11(14)18)5-12(19)15(21)22/h1-4,6,12,20H,5,19H2,(H,21,22)/t12-/m0/s1/f/h21H
T3
liotironina
Tertroxin
N[C@@H](Cc1cc(I)c(Oc2ccc(O)c(I)c2)c(I)c1)C(O)=O
James Malone
InChIKey=AUYYCJSJGJYCDS-YROMPDBNDH
Ele Holloway
O-(4-hydroxy-3-iodophenyl)-3,5-diiodo-L-tyrosine
3,3',5-triiodo-L-thyronine
An iodothyronine compound having iodo substituents at the 3-, 3'- and 5-positions.
HeLa
Natural Language Generator 8th April 2010
A HeLa is a cell line.
A HeLa is all of the following: something that is bearer of a cervical carcinoma, something that derives from
a Homo sapiens, something that derives from an epithelial cell, and something that derives from a cervix.
James Malone
M
molar
http://www.ebi.ac.uk/efo/EFO_0001805
Tomasz Adamusiak
MO_936
A molar is a unit of molarity which expresses a concentration of 1 mole of solute per liter of solution (mol/L).
A unit of concentration which expresses a concentration of 1 mole of solute per liter of solution (mol/L).
James Malone
Jie Zheng
true
D4
D4 glioblastoma derived primary cell line
James Malone
Ele Holloway
An HIV infectious disease that is a characterized cytologically by a reduction in the numbers of CD4-bearing helper T cells to 20 percent or less of normal thereby rendering the subject highly vulnerable to life-threatening conditions (as Pneumocystis carinii pneumonia) and to some that become life threatening (as Kaposi's sarcoma) and that is caused by infection with HIV commonly transmitted in infected blood especially during illicit intravenous drug use and in bodily secretions (as semen) during sexual intercourse.
Immuno-Deficiency Syndromes, Acquired[accessedResource: MSH:D000163][accessDate: 10-05-2010]
GeneRIF:12634405
GeneRIF:11744690
GeneRIF:12944981
GeneRIF:11950939
GeneRIF:14506268
Acquired human immunodeficiency virus infection syndrome NOS[accessedResource: SNOMEDCT:186715004][accessDate: 10-05-2010]
GeneRIF:15793370
Immunologic Deficiency Syndrome, Acquired
Immunologic Deficiency Syndrome, Acquired[accessedResource: MSH:D000163][accessDate: 10-05-2010]
GeneRIF:15814716
acquired Immune deficiency[accessedResource: DOID:635][accessDate: 10-05-2010]
Acquired Immuno-Deficiency Syndrome[accessedResource: MSH:D000163][accessDate: 10-05-2010]
GeneRIF:12964118
SNOMEDCT:62479008
ACQUIRED IMMUNODEFICIENCY SYNDROME, AIDS
Syndromes, Acquired Immunodeficiency[accessedResource: MSH:D000163][accessDate: 10-05-2010]
ACQUIRED IMMUNODEFICIENCY SYNDROME, AIDS[accessedResource: NCIt:C2851][accessDate: 10-05-2010]
MSH:D000163
NCIt:C2851
GeneRIF:16014568
Acquired immunodeficiency syndrome, NOS[accessedResource: SNOMEDCT:62479008][accessDate: 10-05-2010]
GeneRIF:15865925
acquired immunedeficiency syndrome
GeneRIF:15327898
acquired Immune deficiency
AIDS
AIDS (disorder)
A syndrome resulting from the acquired deficiency of cellular immunity caused by the human immunodeficiency virus (HIV). It is characterized by the reduction of the Helper T-lymphocytes in the peripheral blood and the lymph nodes. Symptoms include generalized lymphadenopathy, fever, weight loss, and chronic diarrhea. Patients with AIDS are especially susceptible to opportunistic infections (usually pneumocystis carinii pneumonia, cytomegalovirus (CMV) infections, tuberculosis, candida infections, and cryptococcosis), and the development of malignant neoplasms (usually non-Hodgkin&apos;s lymphoma and Kaposi&apos;s sarcoma). The human immunodeficiency virus is transmitted through sexual contact, sharing of contaminated needles, or transfusion of contaminated blood.
Acquired immune deficiency syndrome (AIDS)
GeneRIF:14555765
An acquired defect of cellular immunity associated with infection by the human immunodeficiency virus (HIV), a CD4-positive T-lymphocyte count under 200 cells/microliter or less than 14% of total lymphocytes, and increased susceptibility to opportunistic infections and malignant neoplasms. Clinical manifestations also include emaciation (wasting) and dementia. These elements reflect criteria for AIDS as defined by the CDC in 1993.
ACQUIRED IMMUNODEFIC SYNDROME[accessedResource: MSH:D000163][accessDate: 10-05-2010]
Immuno-Deficiency Syndrome, Acquired
IMMUNOL DEFIC SYNDROME ACQUIRED[accessedResource: MSH:D000163][accessDate: 10-05-2010]
GeneRIF:14699011
A syndrome resulting from the acquired deficiency of cellular immunity caused by the human immunodeficiency virus (HIV). It is characterized by the reduction of the Helper T-lymphocytes in the peripheral blood and the lymph nodes. Symptoms include generalized lymphadenopathy, fever, weight loss, and chronic diarrhea. Patients with AIDS are especially susceptible to opportunistic infections (usually pneumocystis carinii pneumonia, cytomegalovirus (CMV) infections, tuberculosis, candida infections, and cryptococcosis), and the development of malignant neoplasms (usually non-Hodgkin&apos;s lymphoma and Kaposi&apos;s sarcoma). The human immunodeficiency virus is transmitted through sexual contact, sharing of contaminated needles, or transfusion of contaminated blood.[accessedResource: NCIt:C2851][accessDate: 10-05-2010]
GeneRIF:15809899
Immunodeficiency due to human immunodeficiency virus infection
ACQUIRED IMMUNODEFIC SYNDROME
Acquired immunodeficiency syndrome is a HIV infection consisting of a disease of the human immune system that is characterized cytologically especially by a reduction in the numbers of CD4-bearing helper T cells to 20 percent or less of normal thereby rendering the subject highly vulnerable to life-threatening conditions (as Pneumocystis carinii pneumonia) and to some that become life threatening (as Kaposi's sarcoma) and that is caused by infection with HIV commonly transmitted in infected blood especially during illicit intravenous drug use and in bodily secretions (as semen) during sexual intercourse.
ACQUIRED IMMUNO DEFIC SYNDROME[accessedResource: MSH:D000163][accessDate: 10-05-2010]
GeneRIF:15377788
GeneRIF:12468426
GeneRIF:15042330
acquired immune defic. syndr.[accessedResource: DOID:635][accessDate: 10-05-2010]
GeneRIF:12854077
Acquired human immunodeficiency virus infection syndrome NOS (disorder)
Acquired immune defic. syndr.
Acquired immune deficiency syndrome (AIDS) (disorder)
Immunodeficiency due to human immunodeficiency virus infection[accessedResource: SNOMEDCT:62479008][accessDate: 10-05-2010]
Acquired Immunodeficiency Syndrome
Acquired human immunodeficiency virus infection syndrome NOS (disorder)[accessedResource: SNOMEDCT:186715004][accessDate: 10-05-2010]
Acquired immune deficiency syndrome, NOS[accessedResource: SNOMEDCT:62479008][accessDate: 10-05-2010]
GeneRIF:14523088
GeneRIF:12749011
AIDS, NOS[accessedResource: SNOMEDCT:62479008][accessDate: 10-05-2010]
GeneRIF:12761559
Immunodeficiency Syndrome, Acquired[accessedResource: MSH:D000163][accessDate: 10-05-2010]
Acquired immunodeficiency syndrome, NOS
GeneRIF:12750160
AIDS, NOS
GeneRIF:12427286
GeneRIF:11121048
AIDS (disorder)[accessedResource: SNOMEDCT:62479008][accessDate: 10-05-2010]
ACQUIRED IMMUNE DEFIC SYNDROME
A syndrome resulting from the acquired deficiency of cellular immunity caused by the human immunodeficiency virus (HIV). It is characterized by the reduction of the Helper T-lymphocytes in the peripheral blood and the lymph nodes. Symptoms include generalized lymphadenopathy, fever, weight loss, and chronic diarrhea. Patients with AIDS are especially susceptible to opportunistic infections (usually pneumocystis carinii pneumonia, cytomegalovirus (CMV) infections, tuberculosis, candida infections, and cryptococcosis), and the development of malignant neoplasms (usually non-Hodgkin's lymphoma and Kaposi's sarcoma). The human immunodeficiency virus is transmitted through sexual contact, sharing of contaminated needles, or transfusion of contaminated blood. -- 2004
GeneRIF:14557639
acquired immune deficiency syndrome[accessedResource: DOID:635][accessDate: 10-05-2010]
Acquired Immuno-Deficiency Syndromes
DOID:635
Acquired Immunodeficiency Syndromes
Acquired immune deficiency syndrome, NOS
Acquired immune deficiency syndrome (AIDS) (disorder)[accessedResource: SNOMEDCT:62479008][accessDate: 10-05-2010]
IMMUNOL DEFIC SYNDROME ACQUIRED
Acquired immune deficiency syndrome (AIDS)[accessedResource: SNOMEDCT:62479008][accessDate: 10-05-2010]
ACQUIRED IMMUNE DEFIC SYNDROME[accessedResource: MSH:D000163][accessDate: 10-05-2010]
An HIV infectious disease that is a characterized cytologically by a reduction in the numbers of CD4-bearing helper T cells to 20 percent or less of normal thereby rendering the subject highly vulnerable to life-threatening conditions (as Pneumocystis carinii pneumonia) and to some that become life threatening (as Kaposi's sarcoma) and that is caused by infection with HIV commonly transmitted in infected blood especially during illicit intravenous drug use and in bodily secretions (as semen) during sexual intercourse.[accessedResource: DOID:635][accessDate: 10-05-2010]
acquired immune deficiency syndrome
GeneRIF:14990729
Acquired human immunodeficiency virus infection syndrome NOS
ACQUIRED IMMUNO DEFIC SYNDROME
SNOMEDCT:186715004
James Malone
GeneRIF:12501250
GeneRIF:12114533
An acquired defect of cellular immunity associated with infection by the human immunodeficiency virus (HIV), a CD4-positive T-lymphocyte count under 200 cells/microliter or less than 14% of total lymphocytes, and increased susceptibility to opportunistic infections and malignant neoplasms. Clinical manifestations also include emaciation (wasting) and dementia. These elements reflect criteria for AIDS as defined by the CDC in 1993.[accessedResource: MSH:D000163][accessDate: 10-05-2010]
GeneRIF:12372282
GeneRIF:12134147
GeneRIF:15637236
FMAID:6964
ciliary ganglion
Tomasz Adamusiak
Jie Zheng
ZFS:0000038
larval day 6
James Malone
NCIH747
James Malone
Ele Holloway
FBbt:00005664
embryonic central brain surface glia
James Malone
http://www.ebi.ac.uk/efo/EFO_0001891
CHEBI:50630
A cyclooxygenase inhibitor with specificity for cyclooxygenase 1.
cyclooxygenase 1 inhibitor
James Malone
MO_372
http://www.ebi.ac.uk/efo/EFO_0001450
Virus
Tomasz Adamusiak
Jie Zheng
James Malone
plant growth regulators
http://www.ebi.ac.uk/efo/EFO_0001900
CHEBI:26155
A chemical, natural or artificial, that can affect the rate of growth of a plant.
plant growth regulator
James Malone
IDOMAL:0000322
A schizont produced in the liver of the vertebrate host.
A schizont produced in the liver of the vertebrate host.[accessedResource: IDOMAL:0000322][accessDate: 10-05-2010]
hepatic schizont
Tomasz Adamusiak
Jie Zheng
NCIt:C0152309
FMA:61905
superior temporal gyrus
James Malone
http://jaxmice.jax.org/strain/001026.html
BALB is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/001026.html
BALB/cByJ
James Malone
1.6
true
MA:0000869
obsolete_lateral geniculate nucleus
James Malone
Duplication: use class EFO_0001988
http://www.ebi.ac.uk/efo/location_of
location_of
http://www.ebi.ac.uk/efo/is_realized_by
Relation between a realizable entity and a process. Reciprocal relation of realizes
is_realized_by
has_disease_location
http://www.ebi.ac.uk/efo/realizes
Relation between a process and a material fulfilling a role (i.e. realizing a role within the context of the process). For example a human realizing role of teacher within a lesson teching process.
realizes
http://www.ebi.ac.uk/efo/is_input_of
is_input_of
http://www.ebi.ac.uk/efo/contains
contains
is_unit_of
http://www.ebi.ac.uk/efo/located_in
located_in
Has_participant is a primitive instance-level relation between a process, a continuant, and a time at which the A continuant participates in some way in the process. The relation obtains, for example, when this particular process of oxygen exchange across this particular alveolar membrane has_participant this particular sample of hemoglobin at this particular time.
has_participant
Participates in is a primitive instance-level relation between a continuant and a process in which it participates. For example a scanner participates in a scanning process at some specific time.
participates_in
http://www.ebi.ac.uk/efo/has_input
has_input
http://www.ebi.ac.uk/efo/contained_in
Containment obtains in each case between material and immaterial continuants, for instance: lung contained_in thoracic cavity; bladder contained_in pelvic cavity. Hence containment is not a transitive relation. If c part_of c1 at t then we have also, by our definition and by the axioms of mereology applied to spatial regions, c located_in c1 at t. Thus, many examples of instance-level location relations for continuants are in fact cases of instance-level parthood. For material continuants location and parthood coincide. Containment is location not involving parthood, and arises only where some immaterial continuant is involved. To understand this relation, we first define overlap for continuants as follows: c1 overlap c2 at t =def for some c, c part_of c1 at t and c part_of c2 at t.
contained_in
relationship
is_location_of_disease
EFO_0000823
http://www.ebi.ac.uk/efo/has_part
has_part
http://www.ebi.ac.uk/efo/derived_into
derived_into
has_unit
EFO_0000822
http://www.ebi.ac.uk/efo/part_of
For continuants: C part_of C' if and only if: given any c that instantiates C at a time t, there is some c' such that c' instantiates C' at time t, and c *part_of* c' at t. For processes: P part_of P' if and only if: given any p that instantiates P at a time t, there is some p' such that p' instantiates P' at time t, and p *part_of* p' at t. (Here *part_of* is the instance-level part-relation.)
part_of
http://www.ebi.ac.uk/efo/derives_from
Derivation as a relation between instances. The temporal relation of derivation is more complex. Transformation, on the instance level, is just the relation of identity: each adult is identical to some child existing at some earlier time. Derivation on the instance-level is a relation holding between non-identicals. More precisely, it holds between distinct material continuants when one succeeds the other across a temporal divide in such a way that at least a biologically significant portion of the matter of the earlier continuant is inherited by the later. Thus we will have axioms to the effect that from c derives_from c1 we can infer that c and c1 are not identical and that there is some instant of time t such that c1 exists only prior to and c only subsequent to t. We will also be able to infer that the spatial region occupied by c as it begins to exist at t overlaps with the spatial region occupied by c1 as it ceases to exist in the same instant.
derives_from
http://www.ebi.ac.uk/efo/EFO_0000829
inheres_in
http://www.ebi.ac.uk/efo/is_role_of
role_of
http://www.ebi.ac.uk/efo/has_role
A relation between a continuant C and a role R. The reciprocal relation of role_of.
has_role
http://www.ebi.ac.uk/efo/has_quality
has_quality
http://www.ebi.ac.uk/efo/EFO_0001377
A relation between an entity and a dependent continuant; the reciprocal relation of inheres_in [GOC:cjm] example of usage: red eye bearer_of redness
bearer_of
ENCODE website <http://www.genome.gov/10005107>
ENCODE, full name the Encyclopedia Of DNA Elements, is a public research consortium which has the aim of identifying all functional elements in the human genome sequence.
ENCODE
James Malone