Bioportal mappings to Malaria Ontology (IDOMAL) ver1.1
Bioportal mappings to Human disease (DOID) ver1.296
Bioportal mappings to MGED Ontology (MO) ver1.3.1.1
Bioportal mappings to SNOMED Clinical Terms (SNOMEDCT) ver2009_07_31
Bioportal mappings to Drosophila gross anatomy (FBbt) ver1.38
Bioportal mappings to Mammalian phenotype (MP) ver1.399
Bioportal mappings to NCI Thesaurus (NCIt) ver10.01
Bioportal mappings to Medical Subject Headings (MSH) ver2010_2009_08_17
Bioportal mappings to Cell type (CL) ver1.43
Bioportal mappings to Foundational Model of Anatomy (FMA) ver3.1
Helen Parkinson
Bioportal mappings to Foundational Model of Anatomy (FMA) ver3.0
Bioportal mappings to SNOMED Clinical Terms (SNOMEDCT) ver2010_01_31
Bioportal mappings to NIFSTD (nif) ver1.9.5
Bioportal mappings to Phenotypic quality (PATO) ver1.221
Bioportal mappings to Teleost Anatomy Ontology (TAO) ver1.195
Date: 4 November 2010
Bioportal mappings to Units of measurement (UO) ver1.32
Bioportal mappings to Experimental Factor Ontology (EFO) ver132
Bioportal mappings to Human disease (DOID) ver1.297
Bioportal mappings to NCI Thesaurus (NCIt) ver10.03
Bioportal mappings to Chemical entities of biological interest (CHEBI) ver1.66
Bioportal mappings to Gene Ontology (GO) ver1.1045
James Malone
Bioportal mappings to BRENDA tissue / enzyme source (BTO) ver1.3
Bioportal mappings to NIFSTD (nif) ver1.8
Bioportal mappings to Mosquito gross anatomy (TGMA) ver1.10
Bioportal mappings to Gene Ontology (GO) ver1.886
2.8
Bioportal mappings to Chemical entities of biological interest (CHEBI) ver1.73
Bioportal mappings to Mammalian phenotype (MP) ver1.347
Bioportal mappings to NCBI organismal classification (null) ver1.2
Bioportal mappings to Phenotypic quality (PATO) ver1.270
Bioportal mappings to Ontology for Biomedical Investigations (OBI) ver2009-11-06 Philly (aka version 1.0) Release Candidate
Bioportal mappings to Gene Ontology (GO) ver1.1044
Bioportal mappings to Teleost anatomy and development (TAO) ver1.158
Mappings: CRISP Thesaurus Version 2.5.2.0
Bioportal mappings to NCBI organismal classification (NCBITaxon) ver1.2
Bioportal mappings to Cell type (CL) ver1.46
Mappings:The Arabidopsis Information Resource (TAIR)
Bioportal mappings to Zebrafish anatomy and development (ZFA) ver1.27
Bioportal mappings to Mammalian phenotype (MP) ver1.398
Ele Holloway
Mappings: The Jackson Lab
classified
Bioportal mappings to Human disease (DOID) ver1.192
Bioportal mappings to Malaria Ontology (IDOMAL) ver1.22
Bioportal mappings to Zebrafish anatomy and development (ZFA) ver1.30
Tomasz Adamusiak
Bioportal mappings to Minimal anatomical terminology (MAT) ver1.1
Bioportal mappings to Units of measurement (UO) ver1.27
Bioportal mappings to Drosophila gross anatomy (FBbt) ver1.33
Bioportal mappings to Microarray experimental conditions (MO) ver1.3.1.1
Bioportal mappings to Cell type (CL) ver1.47
Bioportal mappings to International Classification of Diseases (ICD-9) ver9
Mappings to Plant structure (PO)
stage I endometrioid carcinoma
James Malone
D341Med
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311958
CS57537 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311958
CS57537
James Malone
GM11994
James Malone
synonymous with protocol
true
A protocol factor is an experimental factor which describes factors that describe the protocol design of an experiment.
obsolete_protocol factor
James Malone
A polychlorinated dibenzodioxine that has formula C12H4Cl4O2.
2,3,7,8-tetrachlorodibenzodioxine
TCDD
C12H4Cl4O2
Tetrachlorodibenzodioxin
CHEBI:28119
dioxine
2,3,7,8-Tetrachlorodibenzo-p-dioxin
2,3,7,8-tetrachlorooxanthrene
InChIKey=HGUFODBRKLSHSI-UHFFFAOYAA
InChI=1/C12H4Cl4O2/c13-5-1-9-10(2-6(5)14)18-12-4-8(16)7(15)3-11(12)17-9/h1-4H
2,3,7,8-Tetrachlorodibenzodioxin
http://www.ebi.ac.uk/efo/EFO_0001470
Dioxin
Clc1cc2Oc3cc(Cl)c(Cl)cc3Oc2cc1Cl
tetradioxin
nerve cell
CL:0000540
neuron[accessedResource: CL:0000540][accessDate: 10-05-2010]
nerve cell[accessedResource: CL:0000540][accessDate: 10-05-2010]
neuron
obsolete_nerve cell
The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.[accessedResource: CL:0000540][accessDate: 10-05-2010]
1.8
Detected as synonym for neuron, deprecated in favour of it.
true
The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.
James Malone
http://www.ebi.ac.uk/efo/EFO_0001447
Archaea
James Malone
Blood pumping organ composed of four components: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus.
EHDAA:420
Organ with cavitated organ parts, which is continuous with the systemic and
pulmonary arterial and venous trees. Examples: There is only one heart.
FBbt:00003154
TAO:0000114
EV:0100018
XAO:0000064
1: A hollow muscular organ of vertebrate animals that by its rhythmic contraction acts as a force pump maintaining the circulation of the blood. n2: A structure in an invertebrate animal functionally analogous to the vertebrate heart.[accessedResource: BTO:0000562][accessDate: 04-11-2010]
1: A hollow muscular organ of vertebrate animals that by its rhythmic contraction acts as a force pump maintaining the circulation of the blood. n2: A structure in an invertebrate animal functionally analogous to the vertebrate heart.
heart
ZFA:0000114
Blood pumping organ composed of four chambers: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus.[accessedResource: TAO:0000114][accessDate: 04-11-2010]
FMAID:7088
adult heart[accessedResource: FBbt:00003154][accessDate: 04-11-2010]
SAEL:47
James Malone
Blood pumping organ composed of four chambers: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus.
TADS:0000147
EMAPA:16105
BTO:0000562
MFO:0080860
Blood pumping organ composed of four components: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus.[accessedResource: ZFA:0000114][accessDate: 04-11-2010]
MAT:0000036
adult heart
9ALPHA-FLUOROCORTISOL
fludrocortisona
[H][C@@]12CC[C@](O)(C(=O)CO)[C@@]1(C)C[C@H](O)[C@@]3(F)[C@@]2([H])CCC4=CC(=O)CC[C@]34C
A mineralocorticoid that has formula C21H29FO5.
C21H29FO5
InChI=1/C21H29FO5/c1-18-7-5-13(24)9-12(18)3-4-15-14-6-8-20(27,17(26)11-23)19(14,2)10-16(25)21(15,18)22/h9,14-16,23,25,27H,3-8,10-11H2,1-2H3/t14-,15-,16-,18-,19-,20-,21-/m0/s1
fludrocortisonum
InChIKey=AAXVEMMRQDVLJB-BULBTXNYBK
CHEBI:50885
9-fluoro-11beta,17,21-trihydroxypregn-4-ene-3,20-dione
fludrocortisone
http://www.ebi.ac.uk/efo/EFO_0001536
A process in which an organism or part of an organism participates towards the generation of offspring.
reproductive process
James Malone
Dorsal skin is a skin found at the dorsal area of an animal.
dorsal skin
James Malone
SM1
James Malone
Ele Holloway
Drosophila melanogaster cell line
http://www.ebi.ac.uk/efo/EFO_0001491
Cn1cnc(c1Sc1ncnc2nc[nH]c12)[N+]([O-])=O
InChI=1/C9H7N7O2S/c1-15-4-14-7(16(17)18)9(15)19-8-5-6(11-2-10-5)12-3-13-8/h2-4H,1H3,(H,10,11,12,13)/f/h10H
azathioprine
6-((1-Methyl-4-nitro-1H-imidazol-5-yl)thio)-1H-purine
C9H7N7O2S
InChIKey=LMEKQMALGUDUQG-KZFATGLACK
CHEBI:2948
Imuran (TN)
A thiopurine that has formula C9H7N7O2S.
6-(1'-Methyl-4'-nitro-5'-imidazolyl)-mercaptopurine
6-[(1-methyl-4-nitro-1H-imidazol-5-yl)sulfanyl]-7H-purine
James Malone
MAT:0000514
reproductive system - plant
reproductive system - plant[accessedResource: MAT:0000514][accessDate: 04-11-2010]
plant reproductive system structure
James Malone
Streptozocinium
CN(N=O)C(=O)N[C@H]1[C@@H](O)O[C@H](CO)[C@@H](O)[C@@H]1O
N-D-Glucosyl-(2)-N'-nitrosomethylharnstoff
estreptozocina
Streptozocin (TN ZANOSAR)
A N-acylglucosamine that has formula C8H15N3O7.
streptozotocin
InChIKey=ZSJLQEPLLKMAKR-CQRXUCDYDU
streptozocin
streptozocine
C8H15N3O7
2-Deoxy-2-(3-methyl-3-nitrosoureido)-D-glucopyranose
http://www.ebi.ac.uk/efo/EFO_0001615
streptozocinum
Zanosar
James Malone
CHEBI:9288
InChI=1/C8H15N3O7/c1-11(10-17)8(16)9-4-6(14)5(13)3(2-12)18-7(4)15/h3-7,12-15H,2H2,1H3,(H,9,16)/t3-,4-,5-,6-,7+/m1/s1/f/h9H
2-Deoxy-2-(((methylnitrosoamino)carbonyl)amino)-D-glucopyranose
2-deoxy-2-{[methyl(nitroso)carbamoyl]amino}-alpha-D-glucopyranose
N-D-Glucosyl-(2)-N'-nitrosomethylurea
An antibiotic that is produced by Streptomyces achromogenes. It is used as an antineoplastic agent and to induce diabetes in experimental animals.
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#transfect
James Malone
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#transfect[accessedResource: MO_849][accessDate: 04-11-2010]
The process of bringing about genetic alteration of any cell or organism by a variety of means including recombinant DNA technology, viruses, chemical mutagens and X-rays.
MO_849
transfection
Spanish Origin
Hispanics or Latinos
Latino Population[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Hispanic Populations[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Tomasz Adamusiak
Hispanic or Latino[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
A person of Mexican, Puerto Rican, Cuban, Central or South American or other Spanish culture or origin, regardless of race. An arbitrary ethnic classification.
Spanish Origin[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
NCIt:C17459
Latino Population
Hispanic or Latino
Hispanics or Latinos[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
A person of Mexican, Puerto Rican, Cuban, Central or South American or other Spanish culture or origin, regardless of race. An arbitrary ethnic classification.[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Tomasz Adamusiak
Hispanic
Hispanic Populations
SBC-3
James Malone
Ele Holloway
A SBC-3 is a cell line.
A SBC-3 is both something that is bearer of a small cell lung carcinoma, and something that derives from a
Homo sapiens.
JCRB0818
astrocytoma, anaplastic (morphologic abnormality)
grade III Astrocytic tumor[accessedResource: DOID:3078][accessDate: 04-11-2010]
astrocytoma, anaplastic (morphologic abnormality)[accessedResource: DOID:3078][accessDate: 04-11-2010]
Ele Holloway
James Malone
grade III Astrocytic tumor
DOID:3078
anaplastic astrocytoma
U87
James Malone
OE33
James Malone
Ele Holloway
GeneRIF:12918063
GeneRIF:11836605
GeneRIF:12374671
GeneRIF:14634100
Adenocarcinoma of lung (disorder)[accessedResource: SNOMEDCT:254626006][accessDate: 04-11-2010]
GeneRIF:12923324
GeneRIF:12687616
GeneRIF:15815931
GeneRIF:15709189
GeneRIF:12883699
GeneRIF:16109772
GeneRIF:12114441
GeneRIF:14996858
GeneRIF:11957142
GeneRIF:15819721
GeneRIF:12503077
Adenocarcinoma of Lung[accessedResource: NCIt:C3512][accessDate: 04-11-2010]
A carcinoma characterized by the presence of malignant glandular epithelial cells. There is a male predilection with a male to female ratio of 2:1. Usually lung adenocarcinoma is asymptomatic and is identified through screening studies or as an incidental radiologic finding. If clinical symptoms are present they include shortness of breath, cough, hemoptysis, chest pain, and fever. Tobacco smoke is a known risk factor.
GeneRIF:15688187
GeneRIF:11891209
Adenocarcinoma of Lung
GeneRIF:14633739
GeneRIF:15660698
James Malone
GeneRIF:12414512
GeneRIF:12579497
DOID:3910
adenocarcinoma of lung (disorder)
GeneRIF:12163326
GeneRIF:11801602
GeneRIF:15197584
Adenocarcinoma of the Lung[accessedResource: NCIt:C3512][accessDate: 04-11-2010]
GeneRIF:12698189
GeneRIF:12164330
A carcinoma characterized by the presence of malignant glandular epithelial cells. There is a male predilection with a male to female ratio of 2:1. Usually lung adenocarcinoma is asymptomatic and is identified through screening studies or as an incidental radiologic finding. If clinical symptoms are present they include shortness of breath, cough, hemoptysis, chest pain, and fever. Tobacco smoke is a known risk factor.[accessedResource: NCIt:C3512][accessDate: 04-11-2010]
GeneRIF:12942568
GeneRIF:12420220
GeneRIF:16232198
GeneRIF:14735190
GeneRIF:12824892
GeneRIF:15944787
GeneRIF:16184720
GeneRIF:15809747
GeneRIF:16116610
NCIt:C3512
GeneRIF:8564085
GeneRIF:15976377
GeneRIF:14607333
GeneRIF:15943786
GeneRIF:15216431
GeneRIF:12234996
GeneRIF:14511407
GeneRIF:12152160
SNOMEDCT:254626006
lung adenocarcinoma
Adenocarcinoma of the Lung
GeneRIF:16061866
GeneRIF:12644570
GeneRIF:14744769
GeneRIF:16108829
lymphoma or leukaemia cell line
721 B lymphoblasts
A B cell that is mature, having left the bone marrow. Initially, these cells are IgM-positive and IgD-positive, and they can be activated by antigen.[accessedResource: CL:0000785][accessDate: 04-11-2010]
A B cell that is mature, having left the bone marrow. Initially, these cells are IgM-positive and IgD-positive, and they can be activated by antigen.
mature B cell
CL:0000785
mature B lymphocyte
mature B lymphocyte[accessedResource: CL:0000785][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0001499
InChIKey=PBKZPPIHUVSDNM-LKCFEDHXDC
canrenoate
C22H29O4
[H][C@]12CC[C@@]3(C)[C@@]([H])(CC[C@@]3(O)CCC([O-])=O)[C@]1([H])C=CC1=CC(=O)CC[C@]21C
InChI=1/C22H30O4/c1-20-9-5-15(23)13-14(20)3-4-16-17(20)6-10-21(2)18(16)7-11-22(21,26)12-8-19(24)25/h3-4,13,16-18,26H,5-12H2,1-2H3,(H,24,25)/p-1/t16-,17+,18+,20+,21+,22-/m1/s1/fC22H29O4/q-1
17beta-hydroxy-3-oxo-21a-homopregna-4,6-dien-21a-oate
CHEBI:50159
3-[(8R,9S,10R,13S,14S,17R)-17-hydroxy-10,13-dimethyl-3-oxo-2,3,8,9,10,11,12,13,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]propanoate
A steroid acid anion that has formula C22H29O4.
Embryonal rhabdomyosarcoma, pleomorphic[accessedResource: SNOMEDCT:14269005][accessDate: 04-11-2010]
GeneRIF:15184910
GeneRIF:12904596
James Malone
A poorly circumscribed morphologic variant of rhabdomyosarcoma. It is characterized by the presence of primitive skeletal muscle differentiation in any stage of myogenesis. There are three histologic types, spindle cell, botryoid and anaplastic.[accessedResource: NCIt:C8971][accessDate: 04-11-2010]
GeneRIF:12865925
Embryonal Rhabdomyosarcomas
A form of RHABDOMYOSARCOMA arising primarily in the head and neck, especially the orbit, of children below the age of 10. The cells are smaller than those of other rhabdomyosarcomas and are of two basic cell types: spindle cells and round cells. This cancer is highly sensitive to chemotherapy and has a high cure rate with multi-modality therapy. (From Holland et al., Cancer Medicine, 3d ed, p2188)[accessedResource: MSH:D018233][accessDate: 04-11-2010]
Embryonal rhabdomyosarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:14269005][accessDate: 04-11-2010]
SNOMEDCT:404051002
Sarcoma botryoides[accessedResource: SNOMEDCT:14269005][accessDate: 04-11-2010]
MSH:D018233
Botryoid sarcoma
embryonal rhabdomyosarcoma
GeneRIF:15024701
NCIt:C8971
GeneRIF:15475955
DOID:3246
Embryonal rhabdomyosarcoma, pleomorphic
Rhabdomyosarcomas, Embryonal[accessedResource: MSH:D018233][accessDate: 04-11-2010]
SNOMEDCT:14269005
Embryonal rhabdomyosarcoma (morphologic abnormality)
Sarcoma botryoides
Embryonal rhabdomyosarcoma (disorder)[accessedResource: DOID:3246][accessDate: 04-11-2010]
Botryoid sarcoma[accessedResource: SNOMEDCT:14269005][accessDate: 04-11-2010]
GeneRIF:11846302
Embryonal rhabdomyosarcoma (disorder)
A form of RHABDOMYOSARCOMA arising primarily in the head and neck, especially the orbit, of children below the age of 10. The cells are smaller than those of other rhabdomyosarcomas and are of two basic cell types: spindle cells and round cells. This cancer is highly sensitive to chemotherapy and has a high cure rate with multi-modality therapy. (From Holland et al., Cancer Medicine, 3d ed, p2188)
A poorly circumscribed morphologic variant of rhabdomyosarcoma. It is characterized by the presence of primitive skeletal muscle differentiation in any stage of myogenesis. There are three histologic types, spindle cell, botryoid and anaplastic.
http://www.ebi.ac.uk/efo/EFO_0001611
rock salt
InChIKey=FAPWRFPIFSIZLT-ZKGBBZBBCO
salt
NaCl
table salt
halite
Natriumchlorid
chlorure de sodium
sodium chloride
cloruro sodico
A metal chloride salt with a Na(+) counterion.
ClNa
Kochsalz
CHEBI:26710
An inorganic sodium salt that has formula ClNa.
InChI=1/ClH.Na/h1H;/q;+1/p-1/fCl.Na/h1h;/q-1;m
common salt
natrii chloridum
DOID:3587
pancreatic ductal carcinoma
pancreatic ductal carcinoma[accessedResource: DOID:3587][accessDate: 04-11-2010]
pancreatic ductal adenocarcinoma
James Malone
Ele Holloway
Ele Holloway
Natural Language Generator 8th April 2010
James Malone
CM7-1
A CM7-1 is a cell line.
A CM7-1 is both something that derives from a mus musculus, and something that derives from an embryonic stem cell.
cis-Delta(5,8,11,14)-eicosatetraenoic acid
arachidonic acid
An icosa-5,8,11,14-tetraenoic acid that has formula C20H32O2.
A 20-carbon, polyunsaturated omega-6 fatty acid and one of the essential fatty acids required by most mammals; the counterpart to the saturated arachidic acid found in peanut oil. It is present in cell membrane phospholipids and abundant in brain and muscle. Its involvement in cellular signaling (as a lipid second messenger) is complemented by its key role as an inflammatory intermediate. It is also a precursor in the production of eicosanoids.
(5Z,8Z,11Z,14Z)-Icosatetraenoic acid
AA
(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoic acid
InChI=1/C20H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20(21)22/h6-7,9-10,12-13,15-16H,2-5,8,11,14,17-19H2,1H3,(H,21,22)/b7-6-,10-9-,13-12-,16-15-/f/h21H
Arachidonsaeure
cis-5,8,11,14-Eicosatetraenoic acid
C20H32O2
all-cis-5,8,11,14-eicosatetraenoic acid
InChIKey=YZXBAPSDXZZRGB-FSPJQBAYDG
CCCCC\\C=C/C\\C=C/C\\C=C/C\\C=C/CCCC(O)=O
CHEBI:15843
ARA
http://www.ebi.ac.uk/efo/EFO_0001489
PC-9
James Malone
Ele Holloway
true
The time period elapsed since an identifiable point in the life cycle of an organism. If a developmental stage is specified, the identifiable point would be the beginning of that stage.
obsolete_clinical history age
http://www.arabidopsis.org/servlets/TairObject?id=1005158851&type=germplasm
CS57827 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158851&type=germplasm
CS57827
James Malone
MO_714
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#homogenizer
http://www.ebi.ac.uk/efo/EFO_0002018
A homogenizer is an instrument for the homogenization of various types of material, such as tissue, plant, food, soil, and many others.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#homogenizer[accessedResource: MO_714][accessDate: 04-11-2010]
homogenizer
James Malone
GM12044
James Malone
non-alcoholic fatty liver disease
NCIt:C84444
Tomasz Adamusiak
NAFLD - Nonalcoholic Fatty Liver Disease
A term referring to fatty replacement of the hepatic parenchyma which is not related to alcohol use.[accessedResource: NCIt:C84444][accessDate: 04-11-2010]
Nonalcoholic Fatty Liver Disease
NAFLD - Nonalcoholic Fatty Liver Disease[accessedResource: NCIt:C84444][accessDate: 04-11-2010]
Nonalcoholic Fatty Liver Disease[accessedResource: NCIt:C84444][accessDate: 04-11-2010]
A term referring to fatty replacement of the hepatic parenchyma which is not related to alcohol use.
CCFSTTG1
James Malone
Ele Holloway
MA:0001068
superior colliculus
James Malone
Ele Holloway
Kin-S49
James Malone
NCIt:C43392
Denotes the inhabitants of Japan, a person from there, or their descendants elsewhere.
Denotes the inhabitants of Japan, a person from there, or their descendants elsewhere.[accessedResource: NCIt:C43392][accessDate: 04-11-2010]
Japanese
Tomasz Adamusiak
YPAC
James Malone
Ele Holloway
HCC1008
James Malone
Ele Holloway
MO_447
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#genetic_modification_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#genetic_modification_design[accessedResource: MO_447][accessDate: 04-11-2010]
genetic modification design
Tomasz Adamusiak
FMA:54510
Ele Holloway
Oculomotor nuclear complex
James Malone
Nucleus of oculomotor nerve
Nucleus of third cranial nerve
EV:0100250
Oculomotor nuclear complex[accessedResource: FMA:54510][accessDate: 04-11-2010]
Third cranial nerve nucleus
oculomotor nucleus
MA:0000309
FMA:9914
Irregular bone that articulates with other vertebrae, or with one other vertebra and the skull or the sacrum
vertebra
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158871&type=germplasm
CS57847 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158871&type=germplasm
CS57847
James Malone
FBbt:00001433
Any ganglion mother cell (FBbt:00005149) that is part of some embryo (FBbt:00000052).
Any ganglion mother cell (FBbt:00005149) that is part of some embryo (FBbt:00000052).[accessedResource: FBbt:00001433][accessDate: 04-11-2010]
embryonic ganglion mother cell
James Malone
P2 CardMes[accessedResource: FBbt:00005541][accessDate: 04-11-2010]
CardMes[accessedResource: FBbt:00005541][accessDate: 04-11-2010]
CardMes
James Malone
cardiogenic mesoderm
cardiogenic mesoderm[accessedResource: FBbt:00005541][accessDate: 04-11-2010]
CardMesP2
cardiac mesoderm primordium
FBbt:00005541
cardiac mesoderm
cardiac mesoderm[accessedResource: FBbt:00005541][accessDate: 04-11-2010]
A leaf component is a plant component which is part of a leaf.
leaf component
James Malone
duplication: use EFO_0000945
MA:0000688
limb skeleton[accessedResource: MAT:0000151][accessDate: 10-05-2010]
limb bone[accessedResource: MAT:0000151][accessDate: 10-05-2010]
limb skeleton
obsolete_limb bone
MAT:0000151
James Malone
limb bone
true
1.4
http://www.arabidopsis.org/servlets/TairObject?id=1005158874&type=germplasm
CS57850 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158874&type=germplasm
CS57850
James Malone
acute monocytic leukemia, FAB M5 (disorder)
Myeloid Leukemia, Schilling-Type[accessedResource: MSH:D007948][accessDate: 04-11-2010]
acute monocytic leukemia without mention of remission[accessedResource: DOID:8864][accessDate: 04-11-2010]
GeneRIF:12547160
acute Monoblastic Leukemia and acute Monocytic Leukemia
acute monocytic leukemia, morphology (morphologic abnormality)[accessedResource: DOID:8864][accessDate: 04-11-2010]
GeneRIF:15145445
Acute Monocytic Leukemias[accessedResource: MSH:D007948][accessDate: 04-11-2010]
acute monocytic leukemia, morphology (morphologic abnormality)
acute monoblastic leukemia (disorder)
Leukemias, Acute Monocytic
Monoblastic Leukemias, Acute
Tomasz Adamusiak
acute monocytic leukemia without mention of remission
MYELOID LEUKEMIA ACUTE M 05[accessedResource: MSH:D007948][accessDate: 04-11-2010]
Leukemia, Myeloid, Acute, M5
acute monocytic leukaemia[accessedResource: DOID:8864][accessDate: 04-11-2010]
Leukemia, Acute Monoblastic
acute monocytic leukemia, FAB M5 (disorder)[accessedResource: DOID:8864][accessDate: 04-11-2010]
MYELOID LEUKEMIA ACUTE M 05
James Malone
Monoblastic Leukemias, Acute[accessedResource: MSH:D007948][accessDate: 04-11-2010]
Leukemia, Schilling-Type Myeloid
Leukemia, Myeloid, Acute, M5[accessedResource: MSH:D007948][accessDate: 04-11-2010]
Leukemia, Acute Monoblastic[accessedResource: MSH:D007948][accessDate: 04-11-2010]
acute monocytic leukaemia
ICD9:206.0
An acute myeloid leukemia in which 80% or more of the leukemic cells are of monocytic lineage including monoblasts, promonocytes, and MONOCYTES.
acute monoblastic leukemia (disorder)[accessedResource: DOID:8864][accessDate: 04-11-2010]
MSH:D007948
An acute myeloid leukemia in which 80% or more of the leukemic cells are of monocytic lineage including monoblasts, promonocytes, and MONOCYTES.[accessedResource: MSH:D007948][accessDate: 04-11-2010]
DOID:8864
acute monocytic leukemia
acute Monoblastic Leukemia and acute Monocytic Leukemia[accessedResource: DOID:8864][accessDate: 04-11-2010]
antipsychotic drugs
major tranquilizing agents
neuroleptiques
http://www.ebi.ac.uk/efo/EFO_0001486
neuroleptic
antipsychotic drug
Tomasz Adamusiak
Neuroleptikum
neuroleptic agents
major tranquilizers
antipsychotiques
antipsychotics
NIFSTD:nlx_chem_20090603
Antipsychotic drugs are agents that control agitated psychotic behaviour, alleviate acute psychotic states, reduce psychotic symptoms, and exert a quieting effect.
antipsychotic
neuroleptics
grosser Tranquilizer
antipsychotic agents
antipsychotic[accessedResource: NIFSTD:nlx_chem_20090603][accessDate: 04-11-2010]
neuroleptique
placenta
The vascular organ in mammals except monotremes and marsupials that unites the fetus to the maternal uterus and mediates its metabolic exchanges through a more or less intimate association of uterine mucosal with chorionic and usually allantoic tissues; also: an analogous organ in another animal.[accessedResource: BTO:0001078][accessDate: 04-11-2010]
MAT:0000279
BTO:0001078
The vascular organ in mammals except monotremes and marsupials that unites the fetus to the maternal uterus and mediates its metabolic exchanges through a more or less intimate association of uterine mucosal with chorionic and usually allantoic tissues; also: an analogous organ in another animal.
EVM:2000256
EV:3000466
James Malone
SAEL:84
EV:0100119
MA:0000386
FMAID:63934
Olive Baboon
http://www.ebi.ac.uk/efo/EFO_0002652
Papio anubis
James Malone
MO_555
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#compound_treatment_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#compound_treatment_design[accessedResource: MO_555][accessDate: 04-11-2010]
compound treatment design
Tomasz Adamusiak
cardiac atrium[accessedResource: BTO:0000903][accessDate: 04-11-2010]
TAO:0000471
The paired upper chambers of the heart. The left atrium receives oxygenated blood from the pulmonary vein and pumps blood into the left ventricle. The right atrium receives venous deoxygenated blood from the entire body via the superior and inferior vena cavae and pumps blood into the right ventricle.
FBbt:00005615
mouth cavity
MAT:0000496
BTO:0000903
mouth cavity[accessedResource: FBbt:00005615][accessDate: 04-11-2010]
James Malone
One of four heart chambers.[accessedResource: TAO:0000471][accessDate: 04-11-2010]
MA:0000073
atrial tissue
EMAPA:16688
In the heart, the atrium is an upper chamber found on both sides of the heart. The left atrium receives red, oxygenated blood from the lungs by way of the pulmonary veins. The right atrium receives dark red blood from the other parts of the body.
atrium
General anatomical term which refers to a chamber or cavity to which are connected one or more chambers or passageways. Examples: right atrium of heart, atrium of middle nasal meatus, atrium of tympanic cavity, atrium of alveolus.
ZFA0000471
EHDAA:1265
One of four heart chambers.
In the heart, the atrium is an upper chamber found on both sides of the heart. The left atrium receives red, oxygenated blood from the lungs by way of the pulmonary veins. The right atrium receives dark red blood from the other parts of the body.[accessedResource: BTO:0000903][accessDate: 04-11-2010]
FMAID:85574
EV:0100018
MFO:0080900
cardiac atrium
atrial tissue[accessedResource: BTO:0000903][accessDate: 04-11-2010]
CL:0000542
obsolete_T lymphocyte
A cell of the B cell, T cell, or natural killer cell lineage.
T lymphoma cell
James Malone
1.7
Duplicate: use EFO_0000208
A cell of the B cell, T cell, or natural killer cell lineage.[accessedResource: CL:0000542][accessDate: 10-05-2010]
true
MAT:0000351
gall tissue
James Malone
FMA:10635
external carotid artery
James Malone
Tomasz Adamusiak
NIFSTD:sao196989303
PATO:0000918
NIFSTD:birnlex_2391
A volume is a size quality which describes the amount of 3-dimensional space an object occupies.
A 3-D extent quality inhering in a bearer by virtue of the bearer's amount of 3-dimensional space it occupies.
A 3-D extent quality inhering in a bearer by virtue of the bearer's amount of 3-dimensional space it occupies.[accessedResource: PATO:0000918][accessDate: 04-11-2010]
volume
James Malone
CL:0000171
A type of enteocrine cell found in the periphery of the islets of Langerhans that secretes glucagon.
alpha cell
pancreatic A cell[accessedResource: CL:0000171][accessDate: 04-11-2010]
pancreatic alpha cell[accessedResource: CL:0000171][accessDate: 04-11-2010]
A type of enteocrine cell found in the periphery of the islets of Langerhans that secretes glucagon.[accessedResource: CL:0000171][accessDate: 04-11-2010]
Jie Zheng
pancreatic alpha cell
Tomasz Adamusiak
pancreatic A cell
Tuberculosis of other organs NOS (disorder)
Tuberculosis of other specified organs (disorder)
Tuberculosis of other specified organs, bacteriological or histological examination not done
TB - Tuberculosis[accessedResource: SNOMEDCT:56717001][accessDate: 04-11-2010]
GeneRIF:16267303
GeneRIF:15322009
GeneRIF:15774900
ICD9:017.94
Mycobacterium tuberculosis infection[accessedResource: SNOMEDCT:56717001][accessDate: 04-11-2010]
GeneRIF:12296850
Tuberculosis, antepartum[accessedResource: DOID:399][accessDate: 04-11-2010]
GeneRIF:11907104
GeneRIF:15860225
GeneRIF:14979495
GeneRIF:14568951
GeneRIF:15882420
Tuberculosis of other specified organs (disorder)[accessedResource: SNOMEDCT:186271001][accessDate: 04-11-2010]
SNOMEDCT:186271001
TB - Tuberculosis
GeneRIF:12077261
GeneRIF:12075004
Tuberculosis of other specified organs, tubercle bacilli not found by bacteriological examination, but tuberculosis confirmed histologically
ICD9:017.95
GeneRIF:15061663
GeneRIF:12714269
TB OF ORGAN NEC-CULT DX
ICD9:010-018.99
GeneRIF:12244136
TB OF ORGAN NEC-CULT DX[accessedResource: ICD9:017.94][accessDate: 04-11-2010]
GeneRIF:14500465
Tuberculosis of other specified organs, bacteriological or histological examination unknown (at present)[accessedResource: ICD9:017.92][accessDate: 04-11-2010]
Tuberculosis of other specified organs NOS (disorder)
GeneRIF:15649891
TB OF ORGAN NEC-OTH TEST[accessedResource: ICD9:017.96][accessDate: 04-11-2010]
Tuberculosis of other specified organs
tuberculous abscess
GeneRIF:15500449
Tuberculoma (finding)[accessedResource: DOID:399][accessDate: 04-11-2010]
Tuberculosis of other organs NOS[accessedResource: SNOMEDCT:186275005][accessDate: 04-11-2010]
GeneRIF:16224188
Tuberculosis, postpartum[accessedResource: DOID:399][accessDate: 04-11-2010]
GeneRIF:12942785
SNOMEDCT:56717001
DOID:399
TB ORGAN NEC-EXAM UNKN[accessedResource: ICD9:017.92][accessDate: 04-11-2010]
tuberculous abscess[accessedResource: DOID:399][accessDate: 04-11-2010]
Tuberculosis NOS (disorder)
Tuberculosis pregnancy
Tuberculosis of other organs (disorder)
Infection due to Mycobacterium tuberculosis (disorder)
Tuberculosis, antepartum
[X]Tuberculosis of other specified organs[accessedResource: SNOMEDCT:187292005][accessDate: 04-11-2010]
ICD9:017.90
Tuberculosis of other specified organs, bacteriological or histological examination unknown (at present)
TB OF ORGAN NEC-NO EXAM
Tuberculosis of other specified organs, bacteriological or histological examination not done[accessedResource: ICD9:017.91][accessDate: 04-11-2010]
GeneRIF:15187146
tuberculoma
[X]Tuberculosis of other specified organs (disorder)[accessedResource: SNOMEDCT:187292005][accessDate: 04-11-2010]
[X]Tuberculosis of other specified organs (disorder)
Tuberculosis of other specified organs, unspecified examination[accessedResource: ICD9:017.90][accessDate: 04-11-2010]
GeneRIF:11791667
GeneRIF:15599404
ICD9:017.91
Tuberculous (qualifier value)
GeneRIF:12751024
GeneRIF:12531774
TB OF ORGAN NEC-HISTO DX[accessedResource: ICD9:017.95][accessDate: 04-11-2010]
TB OF ORGAN NEC-NO EXAM[accessedResource: ICD9:017.91][accessDate: 04-11-2010]
Infection due to Mycobacterium tuberculosis (disorder)[accessedResource: SNOMEDCT:373576009][accessDate: 04-11-2010]
GeneRIF:12646604
GeneRIF:12934195
GeneRIF:12753505
SNOMEDCT:186275005
GeneRIF:15478069
GeneRIF:15680239
SNOMEDCT:371569005
GeneRIF:12516771
Tuberculosis of other organs NOS
GeneRIF:12195379
NCIt:C3423
TB OF ORGAN NEC-HISTO DX
MTB - Mycobacterium tuberculosis infection
Tuberculosis NOS[accessedResource: SNOMEDCT:186282009][accessDate: 04-11-2010]
GeneRIF:12496428
Tuberculosis, NOS
Tuberculosis of mother, with delivery[accessedResource: DOID:399][accessDate: 04-11-2010]
Tuberculosis (disorder)[accessedResource: SNOMEDCT:56717001][accessDate: 04-11-2010]
GeneRIF:11801672
Mycobacterium tuberculosis infection
Tuberculosis of other specified organs, tubercle bacilli not found by bacteriological or histological examination, but tuberculosis confirmed by other methods [inoculation of animals][accessedResource: ICD9:017.96][accessDate: 04-11-2010]
GeneRIF:16077122
GeneRIF:15686559
Infection due to Mycobacterium tuberculosis[accessedResource: SNOMEDCT:56717001][accessDate: 04-11-2010]
ICD9:017.96
Tuberculous
GeneRIF:12391840
Tuberculoma (finding)
GeneRIF:15993364
GeneRIF:12117995
GeneRIF:14551880
Tuberculosis of other organs
Tuberculosis of other specified organs, tubercle bacilli not found (in sputum) by microscopy, but found by bacterial culture
GeneRIF:12596048
Tuberculous[accessedResource: SNOMEDCT:371569005][accessDate: 04-11-2010]
GeneRIF:15804490
GeneRIF:12218133
Tuberculosis of other specified organs, tubercle bacilli not found by bacteriological or histological examination, but tuberculosis confirmed by other methods [inoculation of animals]
ICD9:017.92
SNOMEDCT:186274009
Tuberculosis of other organs (disorder)[accessedResource: SNOMEDCT:186247008][accessDate: 04-11-2010]
Tuberculosis of other specified organs NOS[accessedResource: SNOMEDCT:186274009][accessDate: 04-11-2010]
Tuberculosis of other specified organs NOS (disorder)[accessedResource: SNOMEDCT:186274009][accessDate: 04-11-2010]
GeneRIF:12391841
TB[accessedResource: NCIt:C3423][accessDate: 04-11-2010]
GeneRIF:15879136
GeneRIF:15295696
GeneRIF:16136464
ICD9:017.93
TB ORGAN NEC-EXAM UNKN
SNOMEDCT:187292005
GeneRIF:16002675
Tuberculosis pregnancy[accessedResource: DOID:399][accessDate: 04-11-2010]
Tuberculous (qualifier value)[accessedResource: SNOMEDCT:371569005][accessDate: 04-11-2010]
Tuberculosis of other specified organs NOS
Tuberculosis of other specified organs, unspecified examination
Tuberculosis (disorder)
GeneRIF:15879133
TB
GeneRIF:16177361
Tuberculosis of other specified organs, tubercle bacilli not found by bacteriological examination, but tuberculosis confirmed histologically[accessedResource: ICD9:017.95][accessDate: 04-11-2010]
Tuberculosis of other specified organs, tubercle bacilli found (in sputum) by microscopy[accessedResource: ICD9:017.93][accessDate: 04-11-2010]
TB OF ORGAN NEC-OTH TEST
A chronic, recurrent infection caused by the bacterium Mycobacterium tuberculosis. Tuberculosis (TB) may affect almost any tissue or organ of the body with the lungs being the most common site of infection. The clinical stages of TB are primary or initial infection, latent or dormant infection, and recrudescent or adult-type TB. Ninety to 95% of primary TB infections may go unrecognized. Histopathologically, tissue lesions consist of granulomas which usually undergo central caseation necrosis. Local symptoms of TB vary according to the part affected; acute symptoms include hectic fever, sweats, and emaciation; serious complications include granulomatous erosion of pulmonary bronchi associated with hemoptysis. If untreated, progressive TB may be associated with a high degree of mortality. This infection is frequently observed in immunocompromised individuals with AIDS or a history of illicit IV drug use. --2004[accessedResource: NCIt:C3423][accessDate: 04-11-2010]
Infection due to Mycobacterium tuberculosis
GeneRIF:16103355
Tuberculosis NOS (disorder)[accessedResource: SNOMEDCT:186282009][accessDate: 04-11-2010]
Tuberculosis of other specified organs, tubercle bacilli found (in sputum) by microscopy
tuberculoma[accessedResource: DOID:399][accessDate: 04-11-2010]
GeneRIF:15863395
SNOMEDCT:373576009
Tuberculosis of mother, with delivery
GeneRIF:15498158
Tuberculosis of other organs NOS (disorder)[accessedResource: SNOMEDCT:186275005][accessDate: 04-11-2010]
SNOMEDCT:186282009
TB OF ORGAN NEC-UNSPEC
GeneRIF:12368450
Tuberculosis of other specified organs[accessedResource: SNOMEDCT:186271001][accessDate: 04-11-2010]
GeneRIF:12234259
GeneRIF:15050961
ICD9:017
Tuberculosis, postpartum
GeneRIF:15138193
Tuberculosis of other specified organs, tubercle bacilli not found (in sputum) by microscopy, but found by bacterial culture[accessedResource: ICD9:017.94][accessDate: 04-11-2010]
TB OF ORGAN NEC-UNSPEC[accessedResource: ICD9:017.90][accessDate: 04-11-2010]
ICD9:017.9
GeneRIF:15866927
GeneRIF:15385470
tuberculosis
James Malone
MTB - Mycobacterium tuberculosis infection[accessedResource: SNOMEDCT:56717001][accessDate: 04-11-2010]
A chronic, recurrent infection caused by the bacterium Mycobacterium tuberculosis. Tuberculosis (TB) may affect almost any tissue or organ of the body with the lungs being the most common site of infection. The clinical stages of TB are primary or initial infection, latent or dormant infection, and recrudescent or adult-type TB. Ninety to 95% of primary TB infections may go unrecognized. Histopathologically, tissue lesions consist of granulomas which usually undergo central caseation necrosis. Local symptoms of TB vary according to the part affected; acute symptoms include hectic fever, sweats, and emaciation; serious complications include granulomatous erosion of pulmonary bronchi associated with hemoptysis. If untreated, progressive TB may be associated with a high degree of mortality. This infection is frequently observed in immunocompromised individuals with AIDS or a history of illicit IV drug use. --2004
TB OF ORGAN NEC-MICRO DX[accessedResource: ICD9:017.93][accessDate: 04-11-2010]
[X]Tuberculosis of other specified organs
GeneRIF:12960337
GeneRIF:15039368
SNOMEDCT:186247008
GeneRIF:12825894
GeneRIF:15695641
TB OF ORGAN NEC-MICRO DX
Tuberculosis of other organs[accessedResource: ICD9:017][accessDate: 04-11-2010]
GeneRIF:12068984
http://jaxmice.jax.org/strain/009264.html
ILSXISS22/TejJ
Tomasz Adamusiak
C6H6O
Phenic acid
carbolic acid
Ele Holloway
James Malone
InChI=1/C6H6O/c7-6-4-2-1-3-5-6/h1-5,7H
PhOH
acide carbolique
Hydroxybenzene
acide phenique
CHEBI:15882
Phenylic acid
A phenol that has formula C6H6O.
http://www.ebi.ac.uk/efo/EFO_0002417
Oc1ccccc1
Karbolsaeure
InChIKey=ISWSIDIOOBJBQZ-UHFFFAOYAI
Benzenol
phenol
A member of the phenols that has formula C6H6O.
Carbolsaeure
3rd instar larva
FBbt:00005748
embryonic anal pad
James Malone
FBbt:00005556
apoptotic amnioserosa
James Malone
salicylic acid acetate
Acetylsalicylate
Easprin
CHEBI:15365
A benzoic acid derivative carrying an acetoxy group at the 2-position.
http://www.ebi.ac.uk/efo/EFO_0001462
CC(=O)Oc1ccccc1C(O)=O
o-acetoxybenzoic acid
acetylsalicylic acid
acido acetilsalicilico
2-(acetyloxy)benzoic acid
ASA
2-acetoxybenzoic acid
http://www.ebi.ac.uk/efo/EFO_0001463
C9H8O4
InChIKey=BSYNRYMUTXBXSQ-WXRBYKJCCW
o-carboxyphenyl acetate
O-acetylsalicylic acid
acidum acetylsalicylicum
acide acetylsalicylique
Benzoic acid carrying an acetoxy group at the 2-position.
Acetylsalicylsaeure
2-Acetoxybenzenecarboxylic acid
Azetylsalizylsaeure
aspirin
acide 2-(acetyloxy)benzoique
InChI=1/C9H8O4/c1-6(10)13-8-5-3-2-4-7(8)9(11)12/h2-5H,1H3,(H,11,12)/f/h11H
James Malone
ZEA:0015175
MAT:0000004
The individual or generation of a plant exhibiting alternation of generations that bears sex organs.[accessedResource: BTO:0000495][accessDate: 04-11-2010]
PO:0009004
The individual or generation of a plant exhibiting alternation of generations that bears sex organs.
gametophyte
BTO:0000495
cardiovascular drugs
cardiovascular agent
http://www.ebi.ac.uk/efo/EFO_0001846
CHEBI:35554
A drug that affects the rate or intensity of cardiac contraction, blood vessel diameter or blood volume.
cardiovascular drug
James Malone
NCIt:C16731
NIFSTD:birnlex_429
NIFSTD:birnlex_699
An infant during the first month after birth.[accessedResource: NCIt:C16731][accessDate: 04-11-2010]
Tomasz Adamusiak
NEWBORN (0-27 DAYS)[accessedResource: NCIt:C16731][accessDate: 04-11-2010]
Newborn
Neonatal[accessedResource: NCIt:C16731][accessDate: 04-11-2010]
neonate
Newborn[accessedResource: NIFSTD:birnlex_699][accessDate: 04-11-2010]
An infant during the first month after birth.
Neonatal
James Malone
NEWBORN (0-27 DAYS)
COLO320HSR
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158756&type=germplasm
CS57732 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158756&type=germplasm
CS57732
James Malone
NCIt:C53310
A study in which participants are examined at only a single time for characteristics of a disease.
A study in which participants are examined at only a single time for characteristics of a disease.[accessedResource: NCIt:C53310][accessDate: 04-11-2010]
cross sectional study
Tomasz Adamusiak
James Malone
Tomasz Adamusiak
A pancreatic cell that produces and secretes hormones such as insulin and glucagon.[accessedResource: NCIt:C32885][accessDate: 04-11-2010]
NCIt:C32885
islet cell
Jie Zheng
An Islet cell is a pancreatic cell that produces and secretes hormones such as insulin and glucagon.
A pancreatic cell that produces and secretes hormones such as insulin and glucagon.
NCIt:C12774
Pulmonary Trunk[accessedResource: NCIt:C12774][accessDate: 04-11-2010]
An artery that conveys venous blood from the heart to the lungs.[accessedResource: BTO:0000778][accessDate: 04-11-2010]
pulmonary artery
An artery arising from the right ventricle of the heart that carries deoxygenated blood to the lungs.
An artery that conveys venous blood from the heart to the lungs.
An artery arising from the right ventricle of the heart that carries deoxygenated blood to the lungs.[accessedResource: NCIt:C12774][accessDate: 04-11-2010]
BTO:0000778
James Malone
Pulmonary Trunk
REC1
James Malone
Ele Holloway
DOID:4887
rotavirus infection
Ele Holloway
Rotavirus infectious disease[accessedResource: DOID:4887][accessDate: 04-11-2010]
Tomasz Adamusiak
Rotavirus infectious disease
http://neurolex.org/wiki/Category:Hilus_of_dentate_gyrus
MA:0000953
hippocampus CA4
Tomasz Adamusiak
<WEB> http://en.wikipedia.org/wiki/ChIP-on-chip
An experiment where chromatin immunoprecipitation (ChIP) is used in combination with microarray technology.
ChIP-Chip
James Malone
The area of the plant from where the stamen is shed.
stamen abscission zone
James Malone
RM82
James Malone
Ele Holloway
A RM 82 is a cell line.
A RM 82 is both something that is bearer of a 39 s sarcoma, and something that derives from a Homo
sapiens.
RM 82
SNOMEDCT:30496006
Dilated cardiomyopathy secondary to viral myocarditis (disorder)
Dilated cardiomyopathy secondary to viral myocarditis
Dilated cardiomyopathy secondary to viral myocarditis[accessedResource: SNOMEDCT:30496006][accessDate: 04-11-2010]
Dilated cardiomyopathy secondary to viral myocarditis (disorder)[accessedResource: SNOMEDCT:30496006][accessDate: 04-11-2010]
viral cardiomyopathy
Tomasz Adamusiak
BTO:0000497
ganglia
MAT:0000343
A group of nerve cell bodies located outside the central nervous system. The term is occasionally applied to certain nuclear groups within the brain or spinal cord, such as the basal ganglia.
James Malone
TAO:0000190
XAO:0000209
A group of nerve cell bodies located outside the central nervous system. The term is occasionally applied to certain nuclear groups within the brain or spinal cord, such as the basal ganglia.[accessedResource: BTO:0000497][accessDate: 04-11-2010]
neural ganglion
EMAPA:16658
EHDAA:918
ganglia[accessedResource: TAO:0000190][accessDate: 04-11-2010]
ganglion
Structures containing a collection of nerve cell bodies. (Source: BioGlossary, www.Biology-Text.com)
neural ganglion[accessedResource: BTO:0000497][accessDate: 04-11-2010]
Structures containing a collection of nerve cell bodies. (Source: BioGlossary, www.Biology-Text.com)[accessedResource: TAO:0000190][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0001860
CHEBI:37733
cholinesterase inhibitor
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158565&type=germplasm
CS57541 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158565&type=germplasm
CS57541
James Malone
TAO:0000036
MA:0000324
EHDAA:2189
EV:0100088
EMAPA:16840
MAT:0000024
ZFA:0000036
James Malone
XAO:0000132
liver and biliary system
C57BL6
JAX:000664
1.8
James Malone
Duplicate use EFO_0000605
obsolete_C57BL/6J
true
A/J is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/000664.html
rosette stage
Medullary breast carcinoma with lymphoid Stroma
An infiltrating breast carcinoma with a relatively favorable prognosis. It is an uncommon carcinoma, accounting for fewer than 1% of all infiltrating breast carcinomas. It is well circumscribed, with soft cut surface and often of considerable size. Microscopically, the predominant growth pattern is syncytial with broad anastomosing bands or sheets of malignant cells. The malignant cells are round with abundant cytoplasm and vesicular nuclei. The sheets of malignant cells are associated with a marked lymphoplasmacytic infiltrate. Glandular or tubular structures are absent.
Invasive Medullary Carcinoma of the Breast
Medullary Breast Carcinoma with Lymphoid Stroma[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
Medullary Carcinoma of Breast[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
Medullary Carcinoma of the Breast[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
Infiltrating Medullary Carcinoma of Breast
Medullary Carcinoma of the Breast
medullary breast carcinoma
Infiltrating Medullary Carcinoma of Breast[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
Invasive Medullary Breast Carcinoma
Invasive Medullary Breast Carcinoma[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
Invasive Medullary Carcinoma of Breast
Infiltrating Medullary Carcinoma of the Breast
James Malone
DOID:5605
Medullary Carcinoma of Breast
An infiltrating breast carcinoma with a relatively favorable prognosis. It is an uncommon carcinoma, accounting for fewer than 1% of all infiltrating breast carcinomas. It is well circumscribed, with soft cut surface and often of considerable size. Microscopically, the predominant growth pattern is syncytial with broad anastomosing bands or sheets of malignant cells. The malignant cells are round with abundant cytoplasm and vesicular nuclei. The sheets of malignant cells are associated with a marked lymphoplasmacytic infiltrate. Glandular or tubular structures are absent.[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
Invasive Medullary Carcinoma of Breast[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
Infiltrating Medullary Carcinoma of the Breast[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
Invasive Medullary Carcinoma of the Breast[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
NCIt:C9119
An assay in which the transcriptome of a biological sample is analysed using array technology.
transcription profiling by array
CRISP Thesaurus 2006, Term Number 2000-0386, http://crisp.cit.nih.gov/Thesaurus/00000107.htm Date accessed: 1st Novemeber 2007
A type of carcinoma derived from glandular tissue or in which tumor cells form recognizable glandular structures.
adenocarcinoma
James Malone
mitochondrial complex I inhibitors
mitochondrial complex I inhibitor
mitochondrial NADH dehydrogenase inhibitor
http://www.ebi.ac.uk/efo/EFO_0001869
CHEBI:38498
mitochondrial NADH:ubiquinone reductase inhibitor
James Malone
MCC:0000434
Ele Holloway
James Malone
SNB19
SNB-19
Tomasz Adamusiak
An inactive substance, treatment or procedure that is intended to provide baseline measurements for the experimental protocol of a clinical trial.
sham therapy
James Malone
NCIt:C753
PLCB[accessedResource: NCIt:C753][accessDate: 04-11-2010]
An inactive substance, treatment or procedure that is intended to provide baseline measurements for the experimental protocol of a clinical trial.[accessedResource: NCIt:C753][accessDate: 04-11-2010]
PLCB
placebo
sham therapy[accessedResource: NCIt:C753][accessDate: 04-11-2010]
(CH3)2SO
InChIKey=IAZDPXIOMUYVGZ-UHFFFAOYAR
methylsulfinylmethane
dimethyli sulfoxidum
InChI=1/C2H6OS/c1-4(2)3/h1-2H3
CS(C)=O
James Malone
CHEBI:28262
dimethyl sulfoxide
Dimethylsulfoxid
dimetil sulfoxido
A 2-carbon sulfoxide in which the sulfur atom has two methyl substituents.
dimethyl sulphoxide
C2H6OS
(methanesulfinyl)methane
dmso
dimethyl sulfur oxide
dimethylsulfoxyde
S(O)Me2
http://www.ebi.ac.uk/efo/EFO_0001523
sulfinylbis(methane)
A sulfoxide that has formula C2H6OS.
FMAID:3897
proximal portion of circumflex branch of left coronary artery
Tomasz Adamusiak
Jie Zheng
Ele Holloway
F13
Normal pancreatic cell line
James Malone
true
obsolete_biomaterial factor
redundant use material entity
DOID:4989
Pancreatitis, NOS[accessedResource: SNOMEDCT:75694006][accessDate: 04-11-2010]
SNOMEDCT:75694006
GeneRIF:12011155
GeneRIF:12825076
Pancreatitides[accessedResource: MSH:D010195][accessDate: 04-11-2010]
GeneRIF:12765848
GeneRIF:12401800
GeneRIF:11961487
GeneRIF:15215328
GeneRIF:12360463
INFLAMMATION of the PANCREAS. Pancreatitis is classified as acute unless there are computed tomographic or endoscopic retrograde cholangiopancreatographic findings of CHRONIC PANCREATITIS (International Symposium on Acute Pancreatitis, Atlanta, 1992). The two most common forms of acute pancreatitis are ALCOHOLIC PANCREATITIS and gallstone pancreatitis.
GeneRIF:12227654
MSH:D010195
Pancreatitis (disorder)
GeneRIF:15237442
GeneRIF:11702203
GeneRIF:11462247
Pancreatitis NOS
GeneRIF:16038043
NCIt:C3306
James Malone
GeneRIF:14526128
GeneRIF:15775704
Pancreatitides
GeneRIF:14762792
Inflammation of the pancreas.[accessedResource: NCIt:C3306][accessDate: 04-11-2010]
GeneRIF:11825647
pancreatitis
GeneRIF:14688470
Inflammation of the pancreas.
INFLAMMATION of the PANCREAS. Pancreatitis is classified as acute unless there are computed tomographic or endoscopic retrograde cholangiopancreatographic findings of CHRONIC PANCREATITIS (International Symposium on Acute Pancreatitis, Atlanta, 1992). The two most common forms of acute pancreatitis are ALCOHOLIC PANCREATITIS and gallstone pancreatitis.[accessedResource: MSH:D010195][accessDate: 04-11-2010]
GeneRIF:16230078
GeneRIF:15458925
GeneRIF:15184081
GeneRIF:12120224
GeneRIF:15786540
GeneRIF:12360464
GeneRIF:15572849
GeneRIF:15316224
Pancreatitis (disorder)[accessedResource: DOID:4989][accessDate: 04-11-2010]
RGD:1359002
Wistar-Kyoto
James Malone
The largest of the three paired salivary glands, located in front of the ear.
The largest of the three paired salivary glands, located in front of the ear.[accessedResource: NCIt:C12427][accessDate: 04-11-2010]
Jie Zheng
Parotid
parotid gland
NCIt:C12427
Parotid[accessedResource: NCIt:C12427][accessDate: 04-11-2010]
Tomasz Adamusiak
FBbt:00005527
James Malone
dorsal ectodermal primordium[accessedResource: FBbt:00005527][accessDate: 04-11-2010]
dorsal ectodermal primordium
dorEcP2[accessedResource: FBbt:00005527][accessDate: 04-11-2010]
dorsal ectoderm primordium
dorEcP2
James Malone
bronchial epithelial
alveolar epithelial type I
bronchoalveolar lavage cell
bronchial epithelial cells
alveolar epithelial type II
true
1.9
obsolete_epithelial cell of lung
CL:0000082
compound term epithelial cell + lung
mass spectrometry assay
CHEBI:53461
http://www.ebi.ac.uk/efo/EFO_0002737
neuropeptide S
Tomasz Adamusiak
Ele Holloway
SKNFI
James Malone
Ele Holloway
PATO:0000117
Size is a morphology quality which describes a material entity's physical magnitude.
A morphology quality inhering in a bearer by virtue of the bearer's physical magnitude.
A morphology quality inhering in a bearer by virtue of the bearer's physical magnitude.[accessedResource: PATO:0000117][accessDate: 04-11-2010]
size
James Malone
A CADO ES1 is a cell line.
A CADO ES1 is both something that is bearer of a 39 s sarcoma, and something that derives from Homo sapiens.
CADO ES1
James Malone
Ele Holloway
A temperature unit is a base unit which is a standard measure of the average kinetic energy of the particles in a sample of matter.
Tomasz Adamusiak
MO_48
http://www.ebi.ac.uk/efo/EFO_0001682
A base unit which is a standard measure of the average kinetic energy of the particles in a sample of matter.
James Malone
temperature unit
Jie Zheng
true
The antibody used to precipitate an antigen out of a solution during the process of immunoprecipitation.
immunoprecipitate
James Malone
raphe magnus
James Malone
Ele Holloway
MO_953
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#organism_part_comparison_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#organism_part_comparison_design[accessedResource: MO_953][accessDate: 04-11-2010]
organism part comparison design
Tomasz Adamusiak
Tomasz Adamusiak
cingulate cortex
NIFSTD:birnlex_934
James Malone
cingulate cortex homogenate
NCIt:C52713
CL:0000679
glutamatergic neuron
James Malone
GeneRIF:15002062
GeneRIF:14763917
NIFSTD:nlx_dys_20090303
Morbid obesity (disorder)
Severe obesity[accessedResource: DOID:11981][accessDate: 04-11-2010]
DOID:11981
Extreme form of obesity where body bass index is 40 or more, which is roughly equivalent to 100 pounds or more over ideal body weight.[accessedResource: NIFSTD:nlx_dys_20090303][accessDate: 04-11-2010]
morbid obesity
ICD9:278.01
The condition of weighing two, three, or more times the ideal weight, so called because it is associated with many serious and life-threatening disorders. In the BODY MASS INDEX, morbid obesity is defined as having a BMI greater than 40.0 kg/m2.[accessedResource: MSH:D009767][accessDate: 04-11-2010]
GeneRIF:16160866
The condition of weighing two, three, or more times the ideal weight, so called because it is associated with many serious and life-threatening disorders. In the BODY MASS INDEX, morbid obesity is defined as having a BMI greater than 40.0 kg/m2.
Obesity
GeneRIF:14764818
GeneRIF:12870165
GeneRIF:15235769
GeneRIF:12032643
Extreme form of obesity where body bass index is 40 or more, which is roughly equivalent to 100 pounds or more over ideal body weight.
James Malone
GeneRIF:12883487
GeneRIF:15919838
Morbid obesity (disorder)[accessedResource: DOID:11981][accessDate: 04-11-2010]
Severe obesity
Obesity[accessedResource: NIFSTD:nlx_dys_20090303][accessDate: 04-11-2010]
GeneRIF:12032749
MSH:D009767
Tomasz Adamusiak
GeneRIF:12148087
SNOMEDCT:238136002
Morbid Obesities[accessedResource: MSH:D009767][accessDate: 04-11-2010]
morbid
morbid[accessedResource: NIFSTD:nlx_dys_20090303][accessDate: 04-11-2010]
Morbid Obesities
GeneRIF:12647279
GeneRIF:16253647
GeneRIF:12822042
MERGED DEFINITION:nTARGET DEFINITION: The small, non-neural, interstitial cells of mesodermal origin that form part of the supporting structure of the central nervous system. They are of various forms and may have slender branched processes. They are migratory and act as phagocytes to waste products of nerve tissue. n--------------------nSOURCE DEFINITION: One of the small interstitial phagocytic cells of the microglia.
microgliocyte
MERGED DEFINITION:nTARGET DEFINITION: The small, non-neural, interstitial cells of mesodermal origin that form part of the supporting structure of the central nervous system. They are of various forms and may have slender branched processes. They are migratory and act as phagocytes to waste products of nerve tissue. n--------------------nSOURCE DEFINITION: One of the small interstitial phagocytic cells of the microglia.[accessedResource: BTO:0000078][accessDate: 04-11-2010]
mixed glial cells (predominantly microglia)
NIFSTD:sao789292116
James Malone
microglia[accessedResource: NIFSTD:sao789292116][accessDate: 04-11-2010]
BTO:0000078
A small, migratory, phagocytic, interstitial cell of hematopoietic origin found in the central nervous system. Microglial cells are of various forms and may have slender branched processes.[accessedResource: NIFSTD:sao789292116][accessDate: 04-11-2010]
microglial cell
microgliocyte[accessedResource: BTO:0000078][accessDate: 04-11-2010]
A central nervous system macrophage found in the parenchyma of the central nervous system. Marker include CD11b-positive, F4/80-positive, and CD68-positive.[accessedResource: CL:0000129][accessDate: 04-11-2010]
microglia
A central nervous system macrophage found in the parenchyma of the central nervous system.
A small, migratory, phagocytic, interstitial cell of hematopoietic origin found in the central nervous system. Microglial cells are of various forms and may have slender branched processes.
Hortega cell
Tomasz Adamusiak
CL:0000129
A central nervous system macrophage found in the parenchyma of the central nervous system. Marker include CD11b-positive, F4/80-positive, and CD68-positive.
Hortega cell[accessedResource: BTO:0000078][accessDate: 04-11-2010]
olanzapine
InChIKey=KVWDHTXUZHCGIO-UHFFFAOYAQ
CN1CCN(CC1)C2=Nc3ccccc3Nc4sc(C)cc24
C17H20N4S
InChI=1/C17H20N4S/c1-12-11-13-16(21-9-7-20(2)8-10-21)18-14-5-3-4-6-15(14)19-17(13)22-12/h3-6,11,19H,7-10H2,1-2H3
James Malone
A benzodiazepine that has formula C17H20N4S.
Zyprexa
olanzapinum
2-methyl-4-(4-methylpiperazin-1-yl)-10H-thieno[2,3-b][1,5]benzodiazepine
olanzapina
FBbt:00005668
embryonic frontal ganglion
James Malone
NCI-H1975
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158649&type=germplasm
CS57625 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158649&type=germplasm
CS57625
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158872&type=germplasm
CS57848 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158872&type=germplasm
CS57848
James Malone
apoplast[accessedResource: MAT:0000348][accessDate: 04-11-2010]
The fluid between the cell wall and the plasma membrane[accessedResource: MAT:0000348][accessDate: 04-11-2010]
MAT:0000348
apoplast
apoplasm
James Malone
The fluid between the cell wall and the plasma membrane
An embryonic specific part is an organism part which is specific to embryos.
BTO:0000174
James Malone
embryonic structure
developmental structure
An anatomical structure that exists only before the organism is fully formed. In mammals, for example, a structure that exists only prior to the birth of the organism. This structure may be normal or abnormal.
An anatomical structure that exists only before the organism is fully formed. In mammals, for example, a structure that exists only prior to the birth of the organism. This structure may be normal or abnormal.[accessedResource: BTO:0000174][accessDate: 04-11-2010]
Natural Language Generator 8th April 2010
Ele Holloway
An ab2.2 is a cell line.
An ab2.2 is both something that derives from a mus musculus, and something that derives from an embryonic stem cell.
AB2.2
James Malone
exposure to cigarette smoke
The act of subjecting someone or something to an influencing experience. E.g. exposure to cigarette smoke
exposure
James Malone
Common Chimpanzee
http://www.ebi.ac.uk/efo/EFO_0002651
Pan troglodytes
James Malone
PMID:15356126
C57BL/6 congenically expressing H2g7 mouse strain.
B6.H2_g7
Tomasz Adamusiak
Jie Zheng
MSH:D046152
Stromal Tumors, Gastrointestinal[accessedResource: MSH:D046152][accessDate: 04-11-2010]
All tumors in the GASTROINTESTINAL TRACT arising from mesenchymal cells (MESODERM) except those of smooth muscle cells (LEIOMYOMA) or Schwann cells (SCHWANNOMA).[accessedResource: MSH:D046152][accessDate: 04-11-2010]
GIST
Stromal tumor of Gastrointestinal tract
DOID:9253
gastrointestinal stromal tumor
Stromal Neoplasm, Gastrointestinal
All tumors in the GASTROINTESTINAL TRACT arising from mesenchymal cells (MESODERM) except those of smooth muscle cells (LEIOMYOMA) or Schwann cells (SCHWANNOMA).
Neoplasms, Gastrointestinal Stromal[accessedResource: MSH:D046152][accessDate: 04-11-2010]
Gastrointestinal Stromal Tumors
Stromal Neoplasms, Gastrointestinal
James Malone
Stromal tumor of gastrointestinal tract[accessedResource: DOID:9253][accessDate: 04-11-2010]
Neoplasm, Gastrointestinal Stromal[accessedResource: MSH:D046152][accessDate: 04-11-2010]
GANT[accessedResource: DOID:9253][accessDate: 04-11-2010]
GANT
GIST[accessedResource: DOID:9253][accessDate: 04-11-2010]
GM12057
James Malone
NIFSTD:birnlex_2110
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#antibody[accessedResource: MO_833][accessDate: 04-11-2010]
antibodies
Jie Zheng
antibody
An antibody function (or antigen binding function) is an infection-fighting protein molecule in blood or secretory fluids that tags, neutralizes, and helps destroy pathogenic microorganisms such as bacteria, viruses and toxins.
James Malone
MO_833
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#antibody
antibodies[accessedResource: NIFSTD:birnlex_2110][accessDate: 04-11-2010]
stage II endometrioid carcinoma
James Malone
true
gram per square meter
gram per metre squared
g/m^2
gram per meter squared
James Malone
medicine
drugs
http://www.ebi.ac.uk/efo/EFO_0002604
Any substance which when absorbed into a living organism may modify one or more of its functions. The term is generally accepted for a substance taken for a therapeutic purpose, but is also commonly used for abused substances.
drug
647V
James Malone
Ele Holloway
James Malone
temporal cortex[accessedResource: BTO:0001355][accessDate: 04-11-2010]
One of the two parietal lobes of the brain located behind the frontal lobe at the top of the brain. Parietal Lobe, Right - Damage to this area can cause visuo-spatial deficits (e.g., the patient may have difficulty finding their way around new, or even familiar, places). Parietal Lobe, Left - Damage to this area may disrupt a patient's ability to understand spoken and/or written language. The parietal lobes contain the primary sensory cortex which controls sensation (touch, pressure). Behind the primary sensory cortex is a large association area that controls fine sensation (judgment of texture, weight, size, shape).[accessedResource: BTO:0001355][accessDate: 04-11-2010]
BTO:0001355
Temporal lobe is the ventrolateral lobe of five lobes comprising each cerebral hemisphere. It is bounded dorsally by the lateral fissure and posteriorly by an arbitrary border shared with the occipital lobe.
MAT:0000508
temporal lobe
One of the two parietal lobes of the brain located behind the frontal lobe at the top of the brain. Parietal Lobe, Right - Damage to this area can cause visuo-spatial deficits (e.g., the patient may have difficulty finding their way around new, or even familiar, places). Parietal Lobe, Left - Damage to this area may disrupt a patient's ability to understand spoken and/or written language. The parietal lobes contain the primary sensory cortex which controls sensation (touch, pressure). Behind the primary sensory cortex is a large association area that controls fine sensation (judgment of texture, weight, size, shape).
Temporal cortex
EMAPA:18797
FMAID:61825
EV:0100169
ZFS:0000037
larval day 5
James Malone
NIFSTD:nifext_171
Cell of Rouget
Tomasz Adamusiak
adventitial reticular cell
pericyte cell
Cell of Rouget[accessedResource: CL:0000184][accessDate: 04-11-2010]
Mural Cell
pericyte
adventitial cell
pericyte cell[accessedResource: CL:0000669][accessDate: 04-11-2010]
CL:0000184
Pericyte of Rouget
Rouget Cell
CL:0000669
adventitial cell[accessedResource: CL:0000669][accessDate: 04-11-2010]
A slender, contractile, mesenchymal-like cell found in close association with capillary walls. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells. (From Stedman, 26th ed).
adventitial reticular cell[accessedResource: CL:0000669][accessDate: 04-11-2010]
Pericyte of Rouget[accessedResource: CL:0000669][accessDate: 04-11-2010]
An elongated, contractile cell found wrapped about precapillary arterioles outside the basement membrane. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells.
*Slender, contractile, mesenchymal-like cell found in close association with capillary walls. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells. (From OBO Cell Type Ontology).
*A flattened, or elongated, stellate-shaped solitary cell with multiple cytoplasmic processes encircling the capillary endothelium and contacting a large abluminal vessel area. It may be equivalent to the vascular smooth muscle cell, although this identify has not been conclusively determined yet (Armulik et al., Circ Res 97: 512, 2005).
Mural Cell[accessedResource: NIFSTD:nifext_171][accessDate: 04-11-2010]
*Slender, contractile, mesenchymal-like cell found in close association with capillary walls. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells. (From OBO Cell Type Ontology).
*A flattened, or elongated, stellate-shaped solitary cell with multiple cytoplasmic processes encircling the capillary endothelium and contacting a large abluminal vessel area. It may be equivalent to the vascular smooth muscle cell, although this identify has not been conclusively determined yet (Armulik et al., Circ Res 97: 512, 2005).[accessedResource: NIFSTD:nifext_171][accessDate: 04-11-2010]
Rouget Cell[accessedResource: NIFSTD:nifext_171][accessDate: 04-11-2010]
An elongated, contractile cell found wrapped about precapillary arterioles outside the basement membrane. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells.[accessedResource: CL:0000669][accessDate: 04-11-2010]
Tomasz Adamusiak
N-Methyl-formamide
A formamide compound having an N-methyl substituent.
[H]C(=O)NC
HCONHCH3
C2H5NO
CHEBI:7438
InChIKey=ATHHXGZTWNVVOU-TULZNQERCH
Methylformamide
Monomethylformamide
N-methylformamide
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0002732
N-Monomethylformamide
InChI=1/C2H5NO/c1-3-2-4/h2H,1H3,(H,3,4)/f/h3H
NMF
MAT:0000221
PO:0006308
ZEA:0015158
James Malone
lateral root meristem
OntologyMappingImporter following MAT:0000221
A derived unit which represents a standard measurement of how much of a given substance there is mixed with another substance.
concentration unit
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001803
MO_61
A concentration unit is a dervied unit which represents a standard measurement of how much of a given substance there is mixed with another substance.
Jie Zheng
James Malone
MO_86
true
ConcentrationUnitOther
ConcentrationUnitOther[accessedResource: MO_86][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0001888
CHEBI:50504
Compound that increase urine volume by increasing the amount of osmotically active solute in the urine. It also increases the osmolarity of plasma.
osmotic diuretic
James Malone
Carcinoma, predominantly squamous cell, arising from epithelial cells of the hypopharynx
carcinoma of the hypopharynx
cancer of Hypopharynx
hypopharyngeal carcinoma
A normal pancreas cell line.
KIF5
James Malone
Ele Holloway
MO_490
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#self_vs_self_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#self_vs_self_design[accessedResource: MO_490][accessDate: 04-11-2010]
self vs self design
Tomasz Adamusiak
Unspecified bacteraemia
Bacteremia, NOS
Bacteremia NOS (disorder)
bacteremia[accessedResource: DOID:2294][accessDate: 04-11-2010]
Bacteremia NOS (disorder)[accessedResource: DOID:2294][accessDate: 04-11-2010]
Unspecified bacteremia (context-dependent category)[accessedResource: DOID:2294][accessDate: 04-11-2010]
Unspecified bacteraemia[accessedResource: DOID:2294][accessDate: 04-11-2010]
Bacteremia (disorder)[accessedResource: DOID:2294][accessDate: 04-11-2010]
cellulitis
Unspecified bacteremia
Unspecified bacteremia[accessedResource: DOID:2294][accessDate: 04-11-2010]
Unspecified bacteremia (context-dependent category)
Tomasz Adamusiak
DOID:2294
bacteremia
Bacteremia (disorder)
Bacteremia, NOS[accessedResource: DOID:2294][accessDate: 04-11-2010]
MO_832
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#clinical_history_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#clinical_history_design[accessedResource: MO_832][accessDate: 04-11-2010]
clinical history design
Tomasz Adamusiak
experimental cell is a cell which is experimentally derived such as a cell line cell, or a cell differentiated in culture
experimental cell
Helen Parkinson
sensory systems[accessedResource: TAO:0000282][accessDate: 04-11-2010]
ll
TAO:0000282
XAO:0000095
James Malone
a line of neuroblasts along the sides of fish and amphibia that detect vibrations and pressure changes
ZFA:0000034
MAT:0000249
sensory systems
sensory system
sensory system[accessedResource: TAO:0000282][accessDate: 04-11-2010]
ll[accessedResource: ZFA:0000034][accessDate: 04-11-2010]
A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.)[accessedResource: ZFA:0000034][accessDate: 04-11-2010]
A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.)
MFO:0003620
AAO:0000269
lateral line system
a line of neuroblasts along the sides of fish and amphibia that detect vibrations and pressure changes[accessedResource: MAT:0000249][accessDate: 04-11-2010]
James Malone
HCC1187
true
UO:0000004
http://www.ebi.ac.uk/efo/EFO_0001681
An electric current unit is a base unit which is a standard measure of the flow of electric charge.
A base unit which is a standard measure of the flow of electric charge.
electric current unit
James Malone
U937
James Malone
umbilical cord blood
Cord Blood[accessedResource: NCIt:C13300][accessDate: 04-11-2010]
Blood present in the umbilical vessels at the time of delivery. If cryopreserved at birth, cord blood can serve as a source of autologous lymphocytes for transplantation to a patient later diagnosed and treated for leukemia or lymphoma.[accessedResource: NCIt:C13300][accessDate: 04-11-2010]
James Malone
Blood present in the umbilical vessels at the time of delivery. If cryopreserved at birth, cord blood can serve as a source of autologous lymphocytes for transplantation to a patient later diagnosed and treated for leukemia or lymphoma.
NCIt:C13300
Cord Blood
DLBCL[accessedResource: NCIt:C8851][accessDate: 04-11-2010]
NCIt:C8851
DLBCL
A non-Hodgkin lymphoma characterized by a diffuse proliferation of predominantly large neoplastic B lymphocytes. It is the most frequently seen type of non-Hodgkin lymphoma, representing 30%-40% of the cases. Morphologic variants include centroblastic lymphoma, immunoblastic lymphoma, and anaplastic lymphoma. Subtypes/entities include T-cell/histiocyte rich large B-cell lymphoma, primary diffuse large B-cell lymphoma of the central nervous system, plasmablastic lymphoma, primary cutaneous diffuse large B-cell lymphoma, leg type, and ALK-positive large B-cell lymphoma.[accessedResource: NCIt:C8851][accessDate: 04-11-2010]
Tomasz Adamusiak
A non-Hodgkin lymphoma characterized by a diffuse proliferation of predominantly large neoplastic B lymphocytes. It is the most frequently seen type of non-Hodgkin lymphoma, representing 30%-40% of the cases. Morphologic variants include centroblastic lymphoma, immunoblastic lymphoma, and anaplastic lymphoma. Subtypes/entities include T-cell/histiocyte rich large B-cell lymphoma, primary diffuse large B-cell lymphoma of the central nervous system, plasmablastic lymphoma, primary cutaneous diffuse large B-cell lymphoma, leg type, and ALK-positive large B-cell lymphoma.
diffuse large B-cell lymphoma
Mouse, C57BL/6, T-lymphocyte cell line.
Ele Holloway
CTLL-2
BTO:0001482
CTLL-2 cell[accessedResource: BTO:0001482][accessDate: 04-11-2010]
Mouse, C57BL/6, T-lymphocyte cell line.[accessedResource: BTO:0001482][accessDate: 04-11-2010]
James Malone
CTLL-2 cell
DOID:5078
ganglioglioma, no ICD-O subtype
ganglioglioma, no ICD-O subtype[accessedResource: DOID:5078][accessDate: 04-11-2010]
ganglioglioma
Tomasz Adamusiak
MA:0000057
Adipose Tissue - Brown (MMHCC)[accessedResource: NCIt:C22704][accessDate: 04-11-2010]
brown adipose tissue
James Malone
brown adipose tissue[accessedResource: BTO:0000156][accessDate: 04-11-2010]
Adipose Tissue - Brown (MMHCC)
BTO:0000156
MAT:0000198
A mammalian heat-producing tissue occurring especially in human newborns and in hibernators.[accessedResource: BTO:0000156][accessDate: 04-11-2010]
NCIt:C22704
brown fat
A mammalian heat-producing tissue occurring especially in human newborns and in hibernators.
An aldopentose, found in the embryos of most edible plants and used in medicine to test for malabsorption by administration in water to the patient.
InChI=1/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h1,3-5,7-10H,2H2/t3-,4+,5+/m0/s1
InChIKey=PYMYPHUHKUWMLA-VPENINKCBR
OC[C@@H](O)[C@H](O)[C@@H](O)C=O
CHEBI:18222
xylose
C5H10O5
xylo-pentose
Xyl
http://www.ebi.ac.uk/efo/EFO_0002681
GM12716
James Malone
SNU5
James Malone
Ele Holloway
CL:0002351
A multi-fate stem cell that is able to differentiate into the pancreas alpha, beta and delta endocrine cells. This cell type expresses neurogenin-3 and Isl-1.
Jie Zheng
progenitor cell of endocrine pancreas
A multi-fate stem cell that is able to differentiate into the pancreas alpha, beta and delta endocrine cells. This cell type expresses neurogenin-3 and Isl-1.[accessedResource: CL:0002351][accessDate: 04-11-2010]
http://en.wikipedia.org/wiki/Pancreas
pancreatic islet progenitor cell
pancreatic endocrine progenitor
Tomasz Adamusiak
pancreatic islet progenitor cell[accessedResource: CL:0002351][accessDate: 04-11-2010]
pancreatic endocrine progenitor[accessedResource: CL:0002351][accessDate: 04-11-2010]
http://www.arabidopsis.org/servlets/TairObject?id=1005158755&type=germplasm
CS57731 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158755&type=germplasm
CS57731
James Malone
NCI-H1395
James Malone
Ele Holloway
primary cells
MO_497
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hybridization_station
http://www.ebi.ac.uk/efo/EFO_0002020
An instrument which is used to maintain the temperature of one or more hybridization_chamber(s) at a defined, constant temperature.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hybridization_station[accessedResource: MO_497][accessDate: 04-11-2010]
hybridization station
James Malone
James Malone
SMC cell
smooth muscle fiber
Tomasz Adamusiak
Muscle tissue that lacks cross striations, that is made up of elongated spindle-shaped cells having a central nucleus, and that is found in vertebrate visceral structures (as the stomach and bladder) as thin sheets performing functions not subject to conscious control by the mind and in all or most of the musculature of invertebrates other than arthropods.[accessedResource: BTO:0001260][accessDate: 04-11-2010]
smooth muscle
smooth muscle cell
MAT:0000303
Muscle tissue that lacks cross striations, that is made up of elongated spindle-shaped cells having a central nucleus, and that is found in vertebrate visceral structures (as the stomach and bladder) as thin sheets performing functions not subject to conscious control by the mind and in all or most of the musculature of invertebrates other than arthropods.
non-striated muscle cell
FBbt:00003525
smooth muscle cell[accessedResource: CL:0000192][accessDate: 04-11-2010]
SMC cell[accessedResource: BTO:0001260][accessDate: 04-11-2010]
A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast).[accessedResource: CL:0000192][accessDate: 04-11-2010]
adult visceral muscle
SAEL:97
EV:0100378
non-striated muscle cell[accessedResource: CL:0000192][accessDate: 04-11-2010]
BTO:0001260
XAO:0000175
CL:0000192
A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast).
smooth muscle fiber[accessedResource: CL:0000192][accessDate: 04-11-2010]
adult visceral muscle[accessedResource: FBbt:00003525][accessDate: 04-11-2010]
P3HR1
James Malone
Ele Holloway
BJABK3
James Malone
James Malone
skeletal muscle
Tomasz Adamusiak
striated muscle cell
MAT:0000302
CL:0000188
Skeletal muscle fiber
Striated muscle cell which has as its direct parts two or more peripherally located nuclei.[accessedResource: CL:0000188][accessDate: 04-11-2010]
skeletal muscle cell[accessedResource: BTO:0001103][accessDate: 04-11-2010]
A usually voluntary muscle made up of elongated, multinucleated, transversely striated muscle fibers, having principally bony attachments.
adult somatic muscle
FMAID:5022
A usually voluntary muscle made up of elongated, multinucleated, transversely striated muscle fibers, having principally bony attachments.[accessedResource: BTO:0001103][accessDate: 04-11-2010]
striated muscle[accessedResource: BTO:0001103][accessDate: 04-11-2010]
Muscle organ
adult somatic muscle[accessedResource: MAT:0000302][accessDate: 04-11-2010]
Skeletal muscle fiber[accessedResource: CL:0000188][accessDate: 04-11-2010]
skeletal muscle cell
striated muscle
Striated muscle cell which has as its direct parts two or more peripherally located nuclei.
XAO:0000174
muscle organ - human
skeletal muscle system
EMAPA:17745
BFBbt:00003259
SAEL:94
skeletal muscle system[accessedResource: MAT:0000302][accessDate: 04-11-2010]
Muscle organ[accessedResource: FMAID:5022][accessDate: 04-11-2010]
Nonparenchymatous organ that primarily consists of skeletal muscle tissue aggregated into macroscopic fasciculi by connective tissue; together with other muscles, it constitutes the muscular system. Examples: biceps, diaphragm, masseter, right third external intercostal muscle, external oblique, levator ani, serratus anterior.
EHDAA:5031
BTO:0001103
EV:0100377
muscle organ - human[accessedResource: MAT:0000302][accessDate: 04-11-2010]
ICD9:691.8
James Malone
atopic eczema
OTHER ATOPIC DERMATITIS[accessedResource: ICD9:691.8][accessDate: 04-11-2010]
Atopic dermatitis and related conditions (disorder)[accessedResource: SNOMEDCT:200769008][accessDate: 04-11-2010]
Other atopic dermatitis and related conditions[accessedResource: ICD9:691.8][accessDate: 04-11-2010]
Atopic dermatitis and related conditions[accessedResource: ICD9:691][accessDate: 04-11-2010]
atopic dermatitis and related conditions
OTHER ATOPIC DERMATITIS
DOID:2771
SNOMEDCT:200769008
Other atopic dermatitis and related conditions
ICD9:691
Atopic dermatitis and related conditions (disorder)
EHDAA:2183
Pituitary gland[accessedResource: FMAID:13889][accessDate: 04-11-2010]
Pituitary gland
MA:0000127
Hypophysis cerebri[accessedResource: FMAID:13889][accessDate: 04-11-2010]
James Malone
hypophysis[accessedResource: MAT:0000077][accessDate: 04-11-2010]
FMAID:13889
A compound organ which is an endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin.[accessedResource: ZFA:0000118][accessDate: 04-11-2010]
pituitary body[accessedResource: BTO:0001073][accessDate: 04-11-2010]
A small oval endocrine organ that is attached to the infundibulum of the brain, consists of an epithelial anterior lobe joined by an intermediate part to a posterior lobe of nervous origin, and produces various internal secretions directly or indirectly impinging on most basic body functions.[accessedResource: BTO:0001073][accessDate: 04-11-2010]
Hypophysis cerebri
XAO:0000161
hypophysis
A compound organ which is an endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin.
EMAPA:16724
A small oval endocrine organ that is attached to the infundibulum of the brain, consists of an epithelial anterior lobe joined by an intermediate part to a posterior lobe of nervous origin, and produces various internal secretions directly or indirectly impinging on most basic body functions.
MAT:0000077
pituitary body
BTO:0001073
SAEL:83
EV:0100132
ZFA:0000118
pituitary
http://www.arabidopsis.org/servlets/TairObject?id=1005158866&type=germplasm
CS57842 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158866&type=germplasm
CS57842
James Malone
vulvar carcinoma
B140P
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158723&type=germplasm
CS57699 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158723&type=germplasm
CS57699
James Malone
SR
James Malone
Ele Holloway
birn_anat:nlx_anat_20090306
FMAID:77383
Core region of nucleus accumbens
Core region of nucleus accumbens[accessedResource: FMAID:77383][accessDate: 04-11-2010]
nucleus accumbens core
Tomasz Adamusiak
MO_184
Tests and results for pathogens infecting organism from which the biosource is derived
pathogen test
Tomasz Adamusiak
Jie Zheng
BTO:0001188
MAT:0000005
PO:0009005
root
The usually underground part of a seed plant body that originates usually from the hypocotyl, functions as an organ of absorption, aeration, and food storage or as a means of anchorage and support, and differs from a stem especially in lacking nodes, buds, and leaves.
GRO:0005338[accessedResource: BTO:0001188][accessDate: 04-11-2010]
James Malone
The usually underground part of a seed plant body that originates usually from the hypocotyl, functions as an organ of absorption, aeration, and food storage or as a means of anchorage and support, and differs from a stem especially in lacking nodes, buds, and leaves.[accessedResource: BTO:0001188][accessDate: 04-11-2010]
GRO:0005338
ZEA:0015034
HDMYZ
James Malone
Ele Holloway
birnlex_7062
Theiler Stage 11a
Theiler Stage 11a[accessedResource: birnlex_7062][accessDate: 04-11-2010]
Theiler stage 11
Tomasz Adamusiak
Jie Zheng
GeneRIF:14566823
Colonic carcinoma[accessedResource: DOID:1520][accessDate: 10-05-2010]
NCIt:C4910
GeneRIF:12517779
GeneRIF:15655830
GeneRIF:11731434
GeneRIF:15637741
GeneRIF:12149254
GeneRIF:12515621
GeneRIF:11819805
GeneRIF:16164044
GeneRIF:12847090
GeneRIF:12466967
Colon Cancer
Colonic carcinoma
GeneRIF:12427560
Carcinoma of colon[accessedResource: SNOMEDCT:269533000][accessDate: 10-05-2010]
DOID:1520
GeneRIF:16199102
GeneRIF:12189558
Colon Cancer[accessedResource: NCIt:C4910][accessDate: 10-05-2010]
GeneRIF:14691449
GeneRIF:12055189
GeneRIF:12090473
GeneRIF:12664617
GeneRIF:15559761
Carcinoma of the Colon[accessedResource: NCIt:C4910][accessDate: 10-05-2010]
carcinoma of colon (disorder)
GeneRIF:15454490
GeneRIF:15750621
GeneRIF:12151344
GeneRIF:11920461
GeneRIF:12820726
GeneRIF:12209584
GeneRIF:15259074
Carcinoma of the Colon
GeneRIF:16278666
GeneRIF:14500642
Use http://www.ebi.ac.uk/efo/EFO_0000365 colorectal adenocarcinoma
GeneRIF:15688023
GeneRIF:14581351
James Malone
GeneRIF:15492751
obsolete_colon carcinoma
A malignant tumor usually arising from the epithelium lining the large intestinal mucosa. Colon carcinoma is one of the most common malignancies in both males and females, and is especially common in North America and Europe. Grossly, most colon carcinomas are polypoid or ulcerating lesions. Microscopically, adenocarcinoma is the most frequently seen morphologic subtype. Prognosis depends on the stage of the disease (depth of invasion, metastasis to regional/distal lymph nodes or other anatomic sites). -- 2004[accessedResource: NCIt:C4910][accessDate: 10-05-2010]
true
2.6.1
GeneRIF:14533006
GeneRIF:15942645
GeneRIF:14707484
GeneRIF:16192633
GeneRIF:12957362
GeneRIF:12030384
Carcinoma of colon
GeneRIF:12670495
GeneRIF:15480430
A malignant tumor usually arising from the epithelium lining the large intestinal mucosa. Colon carcinoma is one of the most common malignancies in both males and females, and is especially common in North America and Europe. Grossly, most colon carcinomas are polypoid or ulcerating lesions. Microscopically, adenocarcinoma is the most frequently seen morphologic subtype. Prognosis depends on the stage of the disease (depth of invasion, metastasis to regional/distal lymph nodes or other anatomic sites). -- 2004
GeneRIF:12697807
SNOMEDCT:269533000
GeneRIF:12210751
GeneRIF:12185585
GeneRIF:15632146
GeneRIF:14715257
carcinoma of colon (disorder)[accessedResource: DOID:1520][accessDate: 10-05-2010]
C4I
James Malone
Ele Holloway
NCI Metathesaurus: C0038445
stria vascularis ductus cochlearis
stria vascularis
vascular stria of cochlear duct[accessedResource: BTO:0001819][accessDate: 04-11-2010]
NIFSTD:birnlex_2525
A stria vascularis is part of a cochlea and is the upper part of the spiral ligament of thescala media that contains numerous small blood vessels.
Tomasz Adamusiak
vascular stria of cochlear duct
The upper part of the spiral ligament of the scala media that contains numerous small blood vessels;nA layer of vascular tissue consisting of epithelial cells, mesothelial cells, and probably some neuroectoderm; it covers the outer wall of the cochlear duct and is thought to secrete the endolymph.[accessedResource: BTO:0001819][accessDate: 04-11-2010]
stria vascularis ductus cochlearis[accessedResource: BTO:0001819][accessDate: 04-11-2010]
BTO:0001819
James Malone
The upper part of the spiral ligament of the scala media that contains numerous small blood vessels;nA layer of vascular tissue consisting of epithelial cells, mesothelial cells, and probably some neuroectoderm; it covers the outer wall of the cochlear duct and is thought to secrete the endolymph.
A disease is a disposition that describes states of disease associated with a particular sample and/or organism.
disease
James Malone
GeneRIF:15292466
GeneRIF:14713387
GeneRIF:15070960
GeneRIF:15111497
GeneRIF:12882938
GeneRIF:16204364
GeneRIF:15448103
GeneRIF:15472174
GeneRIF:14742836
GeneRIF:12436346
GeneRIF:16005429
GeneRIF:15340111
GeneRIF:15919838
GeneRIF:12037740
GeneRIF:15936463
GeneRIF:14642613
GeneRIF:13129857
GeneRIF:12393670
GeneRIF:15979049
GeneRIF:12466947
GeneRIF:15845877
GeneRIF:12401709
GeneRIF:15841306
GeneRIF:15978107
GeneRIF:16167150
GeneRIF:11739396
GeneRIF:15897474
GeneRIF:12086965
GeneRIF:15635487
GeneRIF:11896485
GeneRIF:12429884
GeneRIF:15806395
GeneRIF:11816701
GeneRIF:15616040
GeneRIF:15780823
GeneRIF:12720538
GeneRIF:12424252
GeneRIF:15070774
GeneRIF:15472203
GeneRIF:15323067
GeneRIF:12529499
GeneRIF:16123197
GeneRIF:15281018
GeneRIF:15126243
GeneRIF:12399252
GeneRIF:15889232
GeneRIF:9205417
ICD9:278.00
GeneRIF:14504270
GeneRIF:15867334
GeneRIF:12805399
GeneRIF:15009470
GeneRIF:12488352
GeneRIF:12634434
GeneRIF:12429880
Obesity, unspecified[accessedResource: DOID:9970][accessDate: 04-11-2010]
GeneRIF:15076153
GeneRIF:15946750
GeneRIF:14602788
GeneRIF:15806598
GeneRIF:12597523
GeneRIF:16030156
GeneRIF:15367397
GeneRIF:12856128
GeneRIF:12660878
GeneRIF:12045256
GeneRIF:12869354
GeneRIF:15942768
GeneRIF:12193546
GeneRIF:12658019
GeneRIF:15254878
GeneRIF:15601967
GeneRIF:15369797
GeneRIF:14525909
GeneRIF:16092047
GeneRIF:12375583
GeneRIF:12524228
GeneRIF:16046411
GeneRIF:15795809
GeneRIF:12899679
GeneRIF:12791674
GeneRIF:15955385
GeneRIF:12765968
GeneRIF:12133430
GeneRIF:15795426
GeneRIF:16180331
GeneRIF:14646408
Obese (finding)[accessedResource: DOID:9970][accessDate: 04-11-2010]
GeneRIF:15731326
Tomasz Adamusiak
GeneRIF:15331533
GeneRIF:14715842
GeneRIF:15870101
GeneRIF:15930442
GeneRIF:14993225
GeneRIF:15355432
GeneRIF:16222046
GeneRIF:15114524
GeneRIF:14663468
GeneRIF:12075569
GeneRIF:16054046
GeneRIF:12364441
GeneRIF:16200066
GeneRIF:12690079
GeneRIF:16048795
GeneRIF:15292306
Overweight and obesity[accessedResource: ICD9:278.0][accessDate: 04-11-2010]
GeneRIF:12499395
GeneRIF:12519856
GeneRIF:15536594
An eating-related disorder in which excess body fat has accumulated to such an extent that health may be negatively affected. It is commonly defined as a body mass index (weight divided by height squared) of 30 kg/m2 or higher.
GeneRIF:15090636
GeneRIF:15292322
GeneRIF:12603007
GeneRIF:12968669
GeneRIF:15864530
GeneRIF:12435081
GeneRIF:15677498
GeneRIF:15240652
GeneRIF:12488961
GeneRIF:12033496
GeneRIF:12915696
GeneRIF:15055256
GeneRIF:14968297
GeneRIF:15476445
GeneRIF:12079879
GeneRIF:15939106
GeneRIF:15789277
GeneRIF:16054069
GeneRIF:15778720
GeneRIF:15070936
GeneRIF:15001632
GeneRIF:15331535
GeneRIF:12619866
GeneRIF:12925533
GeneRIF:12970296
GeneRIF:15886715
GeneRIF:15897476
GeneRIF:16135994
GeneRIF:15588160
GeneRIF:15596147
GeneRIF:12519848
GeneRIF:12508940
GeneRIF:15181046
GeneRIF:15002062
GeneRIF:12093799
GeneRIF:12083814
GeneRIF:15297289
GeneRIF:15220220
GeneRIF:15193430
GeneRIF:15959417
GeneRIF:15576462
GeneRIF:15798948
GeneRIF:15169894
GeneRIF:12569166
GeneRIF:12601637
GeneRIF:15277448
GeneRIF:15972581
GeneRIF:12217430
GeneRIF:15944845
GeneRIF:14693717
GeneRIF:12050239
GeneRIF:12050272
GeneRIF:15208271
GeneRIF:12213872
GeneRIF:15604363
GeneRIF:11866034
GeneRIF:15550470
GeneRIF:15834545
GeneRIF:15533384
GeneRIF:15336575
GeneRIF:12490667
GeneRIF:14660752
GeneRIF:12788932
GeneRIF:12529498
GeneRIF:14674682
GeneRIF:15063110
GeneRIF:14657411
GeneRIF:14726256
GeneRIF:11890967
GeneRIF:12829658
GeneRIF:11941369
GeneRIF:12055326
obesity
GeneRIF:15811564
GeneRIF:12767044
GeneRIF:12053815
GeneRIF:14742837
GeneRIF:11872365
GeneRIF:15042014
GeneRIF:12540600
GeneRIF:15466016
Adiposis[accessedResource: SNOMEDCT:414916001][accessDate: 04-11-2010]
GeneRIF:12855752
GeneRIF:12888635
GeneRIF:16054054
GeneRIF:12925701
GeneRIF:15166310
GeneRIF:15051828
GeneRIF:14660566
GeneRIF:12006640
GeneRIF:14693721
GeneRIF:15878965
SNOMEDCT:414915002
GeneRIF:16224049
GeneRIF:15654325
Obesity [Ambiguous]
GeneRIF:15292330
GeneRIF:14746672
Obesity (disorder)
GeneRIF:15613432
GeneRIF:12949354
GeneRIF:15916056
GeneRIF:12920182
GeneRIF:15660115
GeneRIF:12765950
GeneRIF:15156315
GeneRIF:11956156
GeneRIF:15797871
GeneRIF:16030142
GeneRIF:12574803
GeneRIF:15365617
GeneRIF:12086946
GeneRIF:15919794
GeneRIF:14671185
GeneRIF:15985479
GeneRIF:12609752
GeneRIF:15181539
GeneRIF:16102992
GeneRIF:15563274
GeneRIF:12728641
GeneRIF:11829746
GeneRIF:15063799
GeneRIF:15910756
GeneRIF:12865257
GeneRIF:11718682
GeneRIF:12226142
GeneRIF:15685173
GeneRIF:15855349
GeneRIF:15220187
GeneRIF:12660883
GeneRIF:15044674
GeneRIF:15087473
GeneRIF:12730403
GeneRIF:15862893
GeneRIF:15070922
GeneRIF:15292320
GeneRIF:12531492
GeneRIF:12101250
GeneRIF:16288749
GeneRIF:12032748
GeneRIF:12843170
GeneRIF:15601970
GeneRIF:12910269
GeneRIF:12483461
GeneRIF:12951617
GeneRIF:12769595
GeneRIF:15337759
GeneRIF:12429872
GeneRIF:16166222
GeneRIF:15231997
GeneRIF:12810555
GeneRIF:15181048
GeneRIF:12133431
GeneRIF:12765952
GeneRIF:16027245
GeneRIF:12163041
GeneRIF:16021472
Obesity [Ambiguous][accessedResource: DOID:9970][accessDate: 04-11-2010]
SNOMEDCT:414916001
GeneRIF:15034227
GeneRIF:15382608
GeneRIF:12447443
GeneRIF:12529491
GeneRIF:12189588
GeneRIF:15583845
GeneRIF:12032760
GeneRIF:12161541
GeneRIF:12824951
GeneRIF:14600075
GeneRIF:15314024
GeneRIF:15314181
GeneRIF:15198934
GeneRIF:12788860
GeneRIF:12161058
GeneRIF:12900437
GeneRIF:12860835
GeneRIF:14567496
GeneRIF:16222047
GeneRIF:12530526
GeneRIF:11996962
NIFSTD:nlx_dys_20090302
GeneRIF:12365916
GeneRIF:12552573
GeneRIF:12727947
GeneRIF:11800057
GeneRIF:15102885
GeneRIF:15168018
GeneRIF:15518421
GeneRIF:12385894
GeneRIF:15864349
GeneRIF:12540594
GeneRIF:12716769
GeneRIF:14970363
GeneRIF:15869602
GeneRIF:12097321
GeneRIF:15048662
GeneRIF:15520868
GeneRIF:12402973
GeneRIF:15037865
GeneRIF:15223990
GeneRIF:12484512
GeneRIF:12746756
GeneRIF:15191885
GeneRIF:15123613
GeneRIF:12851317
GeneRIF:15823758
James Malone
GeneRIF:15220914
Adiposity
GeneRIF:15994342
GeneRIF:14627764
GeneRIF:15769985
GeneRIF:15010337
GeneRIF:15070954
GeneRIF:12370125
GeneRIF:15598678
GeneRIF:12734779
GeneRIF:16186392
GeneRIF:12960041
GeneRIF:15743038
GeneRIF:14739355
GeneRIF:12882843
GeneRIF:14701677
GeneRIF:15448102
GeneRIF:15533361
GeneRIF:12175706
GeneRIF:11923308
GeneRIF:15494612
GeneRIF:15024085
GeneRIF:15382611
GeneRIF:15292348
GeneRIF:11912547
GeneRIF:15905321
GeneRIF:12031976
GeneRIF:15467829
GeneRIF:11791158
GeneRIF:15579796
GeneRIF:15601832
GeneRIF:12663465
GeneRIF:15735230
GeneRIF:15386812
GeneRIF:16186414
GeneRIF:15854142
GeneRIF:15331532
Obesity, unspecified
GeneRIF:12213628
GeneRIF:12690102
GeneRIF:12213908
GeneRIF:12401727
GeneRIF:15298982
GeneRIF:12855762
GeneRIF:12660874
GeneRIF:14671186
GeneRIF:12507421
GeneRIF:11970899
GeneRIF:12177411
GeneRIF:14747205
GeneRIF:14747301
GeneRIF:16186410
GeneRIF:12364457
GeneRIF:15653680
GeneRIF:12409311
GeneRIF:12086939
GeneRIF:12161552
Obese[accessedResource: SNOMEDCT:414915002][accessDate: 04-11-2010]
GeneRIF:14642615
GeneRIF:12902351
GeneRIF:15889231
GeneRIF:14551151
GeneRIF:15941924
GeneRIF:14707164
GeneRIF:15070752
GeneRIF:15522943
GeneRIF:15855321
GeneRIF:14715869
GeneRIF:12353079
GeneRIF:15181040
GeneRIF:11821707
GeneRIF:14625134
GeneRIF:12582011
Obesity, NOS[accessedResource: DOID:9970][accessDate: 04-11-2010]
GeneRIF:15919839
GeneRIF:14722031
GeneRIF:14764817
GeneRIF:15678704
GeneRIF:15897480
GeneRIF:16249436
GeneRIF:12068290
GeneRIF:15292352
GeneRIF:12642576
GeneRIF:12855749
GeneRIF:12387862
MSH:D009765
GeneRIF:15500001
GeneRIF:15770500
GeneRIF:12746327
GeneRIF:15637293
GeneRIF:15928242
GeneRIF:15919834
GeneRIF:15919835
GeneRIF:15746153
GeneRIF:15248831
GeneRIF:15983230
GeneRIF:12165561
GeneRIF:15890776
GeneRIF:14747283
Adiposity[accessedResource: SNOMEDCT:414916001][accessDate: 04-11-2010]
GeneRIF:15334374
GeneRIF:15331564
ICD9:278.0
GeneRIF:12756299
GeneRIF:12480555
GeneRIF:14642408
GeneRIF:12739015
Obese
GeneRIF:12213871
Overweight and obesity
GeneRIF:12865337
GeneRIF:15277400
Obesity NOS
GeneRIF:15845623
GeneRIF:14759071
GeneRIF:11739957
GeneRIF:15271881
GeneRIF:12376184
GeneRIF:14657196
GeneRIF:12075576
GeneRIF:12829631
GeneRIF:12679463
GeneRIF:15220189
GeneRIF:12716767
GeneRIF:15688209
GeneRIF:11972291
GeneRIF:16260612
GeneRIF:15538935
GeneRIF:11882520
GeneRIF:11882596
GeneRIF:14715497
A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY).[accessedResource: MSH:D009765][accessDate: 04-11-2010]
GeneRIF:15315911
GeneRIF:12032749
GeneRIF:12032642
GeneRIF:15677759
GeneRIF:15620432
GeneRIF:15522935
GeneRIF:15797955
GeneRIF:11916923
GeneRIF:15459958
GeneRIF:12598526
GeneRIF:12429873
GeneRIF:12634439
GeneRIF:12958061
GeneRIF:12055319
GeneRIF:15625086
GeneRIF:12861009
GeneRIF:12923129
GeneRIF:15070780
GeneRIF:16009937
GeneRIF:15781751
GeneRIF:12161655
GeneRIF:14637275
DOID:9970
GeneRIF:15057669
GeneRIF:14691540
GeneRIF:15920074
Obese (finding)
GeneRIF:15570174
GeneRIF:11822583
GeneRIF:12099975
GeneRIF:14682470
GeneRIF:15855351
Adiposis
GeneRIF:14683458
GeneRIF:15358131
GeneRIF:15202783
GeneRIF:12160996
An eating-related disorder in which excess body fat has accumulated to such an extent that health may be negatively affected. It is commonly defined as a body mass index (weight divided by height squared) of 30 kg/m2 or higher.[accessedResource: NIFSTD:nlx_dys_20090302][accessDate: 04-11-2010]
GeneRIF:15616037
GeneRIF:12364415
GeneRIF:12885755
GeneRIF:15820771
GeneRIF:15111524
GeneRIF:12727933
GeneRIF:12165748
GeneRIF:12805252
GeneRIF:12730030
GeneRIF:12080444
GeneRIF:15055467
GeneRIF:11738809
GeneRIF:15855322
GeneRIF:16123358
GeneRIF:15531738
GeneRIF:12649573
GeneRIF:12032637
GeneRIF:16123374
GeneRIF:12869545
A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY).
GeneRIF:15923630
GeneRIF:12145151
GeneRIF:12716739
GeneRIF:12750152
GeneRIF:14673524
Obesity (disorder)[accessedResource: SNOMEDCT:414916001][accessDate: 04-11-2010]
GeneRIF:15001633
GeneRIF:15983201
BC-2
James Malone
Ele Holloway
dietilestilbestrol
alpha,alpha'-diethyl-(E)-4,4'-stilbenediol
CHEBI:41922
4,4'-(3E)-hex-3-ene-3,4-diyldiphenol
trans-Diethylstilbesterol
InChI=1/C18H20O2/c1-3-17(13-5-9-15(19)10-6-13)18(4-2)14-7-11-16(20)12-8-14/h5-12,19-20H,3-4H2,1-2H3/b18-17+
(E)-3,4-bis(4-hydroxyphenyl)-3-hexene
C18H20O2
4,4'-dihydroxy-alpha,beta-diethylstilbene
trans-Diethylstilbestrol
An estrogen that has formula C18H20O2.
trans-4,4'-(1,2-diethyl-1,2-ethenediyl)bisphenol
trans-Diethylstilboesterol
Distilbene
(E)-4,4'-(1,2-diethyl-1,2-ethenediyl)bisphenol
http://www.ebi.ac.uk/efo/EFO_0001522
diethylstilbestrol
InChIKey=RGLYKWWBQGJZGM-ISLYRVAYBW
James Malone
diethylstilbestrolum
CC\\C(c1ccc(O)cc1)=C(\\CC)c1ccc(O)cc1
ZFS:0000042
juvenile days 30-44
James Malone
SN56.B5.G4
James Malone
Ele Holloway
In North America the term is used to distinguish a person having origins in the original peoples of the Indian sub-continent from Native Americans.
NCIt:C41262
Hindu[accessedResource: NCIt:C41262][accessDate: 04-11-2010]
Asian Indian
In North America the term is used to distinguish a person having origins in the original peoples of the Indian sub-continent from Native Americans.[accessedResource: NCIt:C41262][accessDate: 04-11-2010]
Hindu
Tomasz Adamusiak
Asian Indians[accessedResource: NCIt:C41262][accessDate: 04-11-2010]
Asian Indians
HCC15
James Malone
Any of the three membranes that envelop the brain and spinal cord.[accessedResource: BTO:0000144][accessDate: 04-11-2010]
MA:0000113
EV:0100312
BTO:0000144
FMAID:9589
Meninx[accessedResource: FMAID:9589][accessDate: 04-11-2010]
SAEL:66
meninx
MAT:0000113
James Malone
EMAPA:17764
EHDAA:3688
meninges
Any of the three membranes that envelop the brain and spinal cord.
http://www.arabidopsis.org/servlets/TairObject?id=1005158690&type=germplasm
CS57664 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158690&type=germplasm
CS57666
James Malone
GLI72
James Malone
SW948
James Malone
Ele Holloway
ZFS:0000026
segmentation 14-19 somites
James Malone
MAT:0000338
The peripheral nervous system (PNS) connects the central nervous system (CNS) to sensory organs (such as the eye and ear), other organs of the body, muscles, blood vessels and glands.
EHDAA:2893
TADS:0000221
XAO:0000178
The outer parts of the nervous system that perform sensory and motor functions.[accessedResource: FBbt:00005098][accessDate: 04-11-2010]
peripheral nervous system
EMAPA:16665
BTO:0001028
PNS[accessedResource: FBbt:00005098][accessDate: 04-11-2010]
FBbt:00005098
AAO:0000429
The outer parts of the nervous system that perform sensory and motor functions.
The peripheral nervous system (PNS) connects the central nervous system (CNS) to sensory organs (such as the eye and ear), other organs of the body, muscles, blood vessels and glands.[accessedResource: BTO:0001028][accessDate: 04-11-2010]
James Malone
PNS
James Malone
HCC1569
muscle[accessedResource: MAT:0000025][accessDate: 04-11-2010]
James Malone
MAT:0000025
AAO:0000307
MA:0000015
musculature
TAO:0000548
MFO:0002100
ZFA:0000548
muscular system
BTO:0001485
TADS:0000324
muscle system
EV:0100146
musculature[accessedResource: MAT:0000025][accessDate: 04-11-2010]
The bodily system that is composed of skeletal, smooth, and cardiac muscle tissue and functions in movement of the body or of materials through the body, maintenance of posture, and heat production.[accessedResource: BTO:0001485][accessDate: 04-11-2010]
muscles[accessedResource: TAO:0000548][accessDate: 04-11-2010]
The bodily system that is composed of skeletal, smooth, and cardiac muscle tissue and functions in movement of the body or of materials through the body, maintenance of posture, and heat production.
muscles
WBbt:0005737
FBbt:00005069
motor system
musculature system
motor system[accessedResource: MAT:0000025][accessDate: 04-11-2010]
muscle
muscule system
musculature system[accessedResource: TAO:0000548][accessDate: 04-11-2010]
muscle system[accessedResource: MAT:0000025][accessDate: 04-11-2010]
4-(4-(para-chlorophenyl)-4-hydroxypiperidino)-4'-fluorobutyrophenone
CHEBI:5613
A compound composed of a central piperidine structure with hydroxy and p-chlorophenyl substituents at position 4; and an N-linked p-fluorobutyrophenone moiety.
OC1(CCN(CCCC(=O)c2ccc(F)cc2)CC1)c1ccc(Cl)cc1
1-(3-p-fluorobenzoylpropyl)-4-p-chlorophenyl-4-hydroxypiperidine
C21H23ClFNO2
InChI=1/C21H23ClFNO2/c22-18-7-5-17(6-8-18)21(26)11-14-24(15-12-21)13-1-2-20(25)16-3-9-19(23)10-4-16/h3-10,26H,1-2,11-15H2
Haldol
haloperidolum
4'-fluoro-4-(4-hydroxy-4-(4'-chlorophenyl)piperidino)butyrophenone
4-[4-(4-chlorophenyl)-4-hydroxypiperidin-1-yl]-1-(4-fluorophenyl)butan-1-one
haloperidol
InChIKey=LNEPOXFFQSENCJ-UHFFFAOYAL
gamma-(4-(p-chlorophenyl)-4-hydroxpiperidino)-p-fluorbutyrophenone
A hydroxypiperidine that has formula C21H23ClFNO2.
http://www.ebi.ac.uk/efo/EFO_0001549
4'-fluoro-4-(4-(p-chlorophenyl)-4-hydroxypiperidinyl)butyrophenone
4-[4-(4-chlorophenyl)-4-hydroxy-1-piperidyl]-1-(4-fluorophenyl)-butan-1-one
James Malone
HepG2
A gene list is a report of the names or identifiers of genes that are the outcome of an analysis or have been put together for the purpose of an analysis.
gene list
Chris Stoeckert
interstitial cell[accessedResource: CL:0000178][accessDate: 04-11-2010]
interstitial cell
CL:0000178
Leydig cell
A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis.[accessedResource: CL:0000178][accessDate: 04-11-2010]
James Malone
testis - leydig cell
A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis.
PO:0000014
rosette leaf
James Malone
abscisin II
(7E,9Z)-(6S)-6-hydroxy-3-oxo-11-apo-epsilon-caroten-11-oic acid
CHEBI:2365
http://www.ebi.ac.uk/efo/EFO_0001464
2-cis,4-trans-abscisic acid
The naturally occurring (1'S)-(+) enantiomer of abscisic acid. It is an important sesquiterpenoid plant hormone which acts as a regulator of plant responses to environmental stresses such as drought and cold.
InChIKey=JLIDBLDQVAYHNE-MPLKMVHTDC
(2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid
ABA
(S)-(+)-abscisic acid
An abscisic acid that has formula C15H20O4.
James Malone
CC(\\C=C\\[C@@]1(O)C(C)=CC(=O)CC1(C)C)=C\\C(O)=O
(+)-abscisic acid
C15H20O4
InChI=1/C15H20O4/c1-10(7-13(17)18)5-6-15(19)11(2)8-12(16)9-14(15,3)4/h5-8,19H,9H2,1-4H3,(H,17,18)/b6-5+,10-7-/t15-/m1/s1/f/h17H
The act of regarding attentively and studying facts and occurrences, gathering data through analyzing, measuring, and drawing conclusions
observation study
James Malone
James Malone
actinic keratosis (disorder)
actinic keratosis (morphologic abnormality)
Senile hyperkeratosis
actinic keratosis
actinic (Solar) Keratosis[accessedResource: DOID:8866][accessDate: 04-11-2010]
Ele Holloway
actinic keratosis (morphologic abnormality)[accessedResource: DOID:8866][accessDate: 04-11-2010]
DOID:8866
actinic (Solar) Keratosis
Solar keratosis[accessedResource: DOID:8866][accessDate: 04-11-2010]
SK - Solar keratosis
Solar keratosis
Senile hyperkeratosis[accessedResource: DOID:8866][accessDate: 04-11-2010]
actinic keratosis (disorder)[accessedResource: DOID:8866][accessDate: 04-11-2010]
SK - Solar keratosis[accessedResource: DOID:8866][accessDate: 04-11-2010]
UO:0000026
true
http://www.ebi.ac.uk/efo/EFO_0001709
fg
femtogram
James Malone
A mass unit which is equal to 10^[-15] g.
A microgram is a mass unit which is equal to 1 gram x 10^-15
true
A specifically dependent continuant [snap:SpecificallyDependentContinuant] that is exhibited if it inheres in an entity or entities at all (a categorical property).
http://www.ebi.ac.uk/efo/EFO_0001436
A quality is an entity that describes some aspect which is intrinsic to that particular object and is dependent on or more material entities in which it inheres in or is borne by. Example the color of a tomato, the ambient temperature of air, the circumference of a waist, the shape of a nose, the mass of a piece of gold, the weight of a chimpanzee
quality
James Malone
HUVEC cell line
TE85
James Malone
Ele Holloway
SNU16
James Malone
Ele Holloway
Tomasz Adamusiak
oxidane
[H]O[H]
http://www.ebi.ac.uk/efo/EFO_0001637
water
InChI=1/H2O/h1H2
InChIKey=XLYOFNOQVPJJNP-UHFFFAOYAF
eau
An inorganic hydroxy compound that has formula H2O.
James Malone
Jie Zheng
BOUND WATER
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#water[accessedResource: MO_380][accessDate: 04-11-2010]
acqua
hydrogen hydroxide
aqua
Wasser
HOH
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#water
[OH2]
dihydrogen oxide
dihydridooxygen
MO_380
agua
H2O
http://www.arabidopsis.org/servlets/TairObject?id=1005158849&type=germplasm
CS57825 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158849&type=germplasm
CS57825
James Malone
James Malone
A realizable entity [snap:RealizableEntity] that essentially causes a specific process or transformation in the object [snap:Object] in which it inheres, under specific circumstances and in conjunction with the laws of nature. A general formula for dispositions is: X (object [snap:Object] has the disposition D to (transform, initiate a process) R under conditions C.
http://www.ebi.ac.uk/efo/EFO_0001438
For example, the disposition of vegetables to decay when not refrigerated, the disposition of blood to coagulate, the disposition of a patient with a weakened immune system to contract disease.
A disposition is an entity that essentially causes a specific process or transformation in an entity in which it inheres, under specific circumstances and in conjunction with the laws of nature. For example, the disposition of vegetables to decay when not refrigerated, the disposition of blood to coagulate, the disposition of a patient with a weakened immune system to contract disease.
disease property
true
disposition
James Malone
hematopoietic stem cell
A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system. Hematopoietic stem cells lack cell markers of effector cells (lin-negative). Lin-negative is defined by lacking one or more of the following cell surface markers: CD2, CD3 epsilon, CD4,CD5,CD8 alpha chain, CD14, CD19, CD20, integrin alpha-M, neural cell adhesion molecule 1, lymphocyte antigen 6G, lymphocyte antigen 76.[accessedResource: CL:0000037][accessDate: 04-11-2010]
blood forming stem cell[accessedResource: CL:0000037][accessDate: 04-11-2010]
colony forming unit hematopoietic[accessedResource: CL:0000037][accessDate: 04-11-2010]
hemopoietic progenitor cell
CL:0000037
hemopoietic stem cell[accessedResource: CL:0000037][accessDate: 04-11-2010]
hematopoietic progenitor cell
hemopoietic stem cell
colony forming unit hematopoietic
A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.
A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system. Hematopoietic stem cells lack cell markers of effector cells (lin-negative). Lin-negative is defined by lacking one or more of the following cell surface markers: CD2, CD3 epsilon, CD4,CD5,CD8 alpha chain, CD14, CD19, CD20, integrin alpha-M, neural cell adhesion molecule 1, lymphocyte antigen 6G, lymphocyte antigen 76.
HSC
blood forming stem cell
HSC[accessedResource: CL:0000037][accessDate: 04-11-2010]
FBbt:00005629
embryonic gastric caecum
James Malone
FBbt:00001056
embryonic central nervous system
James Malone
4470
James Malone
Ele Holloway
DOID:3907
SNOMEDCT:254634000
Epidermoid carcinoma of lung
Epidermoid Cell Lung Carcinoma[accessedResource: NCIt:C3493][accessDate: 04-11-2010]
SCC - Squamous cell carcinoma of lung
GeneRIF:12107845
Epidermoid Cell Carcinoma of Lung
GeneRIF:15889794
James Malone
SCC - Squamous cell carcinoma of lung[accessedResource: SNOMEDCT:254634000][accessDate: 04-11-2010]
squamous cell carcinoma of lung (disorder)[accessedResource: DOID:3907][accessDate: 04-11-2010]
NCIt:C3493
Squamous Cell Carcinoma of the Lung[accessedResource: NCIt:C3493][accessDate: 04-11-2010]
Epidermoid cell carcinoma of the lung
Epidermoid Cell Carcinoma of the Lung[accessedResource: NCIt:C3493][accessDate: 04-11-2010]
A carcinoma arising from malignant squamous bronchial epithelial cells and characterized by the presence of keratinization and/or intercellular bridges. Cigarette smoking and arsenic exposure are strongly associated with squamous cell lung carcinoma.
Squamous cell carcinoma of lung[accessedResource: SNOMEDCT:254634000][accessDate: 04-11-2010]
squamous cell lung carcinoma
Squamous cell carcinoma of lung (disorder)
Epidermoid Cell Lung Carcinoma
Epidermoid carcinoma of lung[accessedResource: SNOMEDCT:254634000][accessDate: 04-11-2010]
Squamous Cell Carcinoma of Lung
Epidermoid Cell Carcinoma of Lung[accessedResource: NCIt:C3493][accessDate: 04-11-2010]
A carcinoma arising from malignant squamous bronchial epithelial cells and characterized by the presence of keratinization and/or intercellular bridges. Cigarette smoking and arsenic exposure are strongly associated with squamous cell lung carcinoma.[accessedResource: NCIt:C3493][accessDate: 04-11-2010]
Squamous Cell Carcinoma of the Lung
NCI-H1563
James Malone
Ele Holloway
submaxillary gland
submandibular gland
One of the three chief, paired salivary glands, predominantly serous, lying partly above and partly below the posterior half of the base of the mandible.[accessedResource: BTO:0001316][accessDate: 04-11-2010]
One of two salivary glands in the neck, located in the space bound by the two bellies of the digastric muscle and the angle of the mandible. It discharges through the submandibular duct. (MeSH)
One of the three chief, paired salivary glands, predominantly serous, lying partly above and partly below the posterior half of the base of the mandible.
One of two salivary glands in the neck, located in the space bound by the two bellies of the digastric muscle and the angle of the mandible. It discharges through the submandibular duct. (MeSH)[accessedResource: NCIt:C12233][accessDate: 04-11-2010]
Submaxillary Gland[accessedResource: NCIt:C12233][accessDate: 04-11-2010]
BTO:0001316
James Malone
NCIt:C12233
An embryonic cell that develops into a nerve cell or neuron.
James Malone
Tomasz Adamusiak
CL:0000031
neuroblast (sensu Vertebrata)
neuroblast
neuroblast[accessedResource: CL:0000031][accessDate: 04-11-2010]
adrenal neuroblast
An embryonic cell that develops into a nerve cell or neuron.[accessedResource: CL:0000337][accessDate: 04-11-2010]
CL:0000337
MO_520
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#funder
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#funder[accessedResource: MO_520][accessDate: 04-11-2010]
funder
Tomasz Adamusiak
true
MO_548
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_type[accessedResource: MO_548][accessDate: 04-11-2010]
James Malone
Tomasz Adamusiak
A cell type is a distinct morphological or functional form of cell. Examples are epithelial, glial etc.
epithelial, glial.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_type
cell type
NCIt:C34572
empyema
Tomasz Adamusiak
The assemblage of physical properties or qualities by which male is distinguished from female; the physical difference between male and female; the distinguishing peculiarity of male or female.
An organismal quality inhering in a bearer by virtue of the bearer's ability to undergo sexual reproduction in order to differentiate the individuals or types involved.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#sex[accessedResource: MO_680][accessDate: 04-11-2010]
biological sex
PATO:0000047
James Malone
MO_680
biological sex[accessedResource: PATO:0000047][accessDate: 04-11-2010]
An organismal quality inhering in a bearer by virtue of the bearer's ability to undergo sexual reproduction in order to differentiate the individuals or types involved.[accessedResource: PATO:0000047][accessDate: 04-11-2010]
NCIt:C28421
Jie Zheng
Term applied to any organism able to undergo sexual reproduction in order to differentiate the individuals or types involved. Sexual reproduction is defined as the ability to exchange genetic material with the potential of recombinant progeny.
The assemblage of physical properties or qualities by which male is distinguished from female; the physical difference between male and female; the distinguishing peculiarity of male or female.[accessedResource: NCIt:C28421][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#sex
Tomasz Adamusiak
sex
Type TT leprosy[accessedResource: SNOMEDCT:70143003][accessDate: 04-11-2010]
Leprosies, Neural[accessedResource: MSH:D015441][accessDate: 04-11-2010]
Neural Leprosies
TT - Full tuberculoid leprosy
Tuberculoid leprosy [type T]
Full tuberculoid leprosy[accessedResource: SNOMEDCT:70143003][accessDate: 04-11-2010]
James Malone
Leprosies, Tuberculoid[accessedResource: MSH:D015441][accessDate: 04-11-2010]
Tuberculoid leprosy (disorder)[accessedResource: SNOMEDCT:70143003][accessDate: 04-11-2010]
Smooth leprosy
Leprosies, Macular[accessedResource: MSH:D015441][accessDate: 04-11-2010]
Tuberculoid leprosy (disorder)
Tuberculoid leprosy [type T][accessedResource: DOID:1025][accessDate: 04-11-2010]
Type TT leprosy
Tuberculoid Leprosies
type T leprosy
TT - Full tuberculoid leprosy[accessedResource: SNOMEDCT:70143003][accessDate: 04-11-2010]
A principal or polar form of LEPROSY in which the skin lesions are few and are sharply demarcated. Peripheral nerve involvement is pronounced and may be severe. Unlike lepromatous leprosy (LEPROSY, LEPROMATOUS), the lepromin test is positive. Tuberculoid leprosy is rarely a source of infection to others.
Leprosy, Neural
SNOMEDCT:70143003
Leprosy, Neural[accessedResource: MSH:D015441][accessDate: 04-11-2010]
ICD9:030.1
MSH:D015441
tuberculoid leprosy
Smooth leprosy[accessedResource: SNOMEDCT:70143003][accessDate: 04-11-2010]
Type T leprosy[accessedResource: SNOMEDCT:70143003][accessDate: 04-11-2010]
Leprosy, Macular[accessedResource: MSH:D015441][accessDate: 04-11-2010]
Full tuberculoid leprosy
DOID:1025
Nodular leprosy
Nodular leprosy[accessedResource: SNOMEDCT:70143003][accessDate: 04-11-2010]
Macular Leprosy
A principal or polar form of LEPROSY in which the skin lesions are few and are sharply demarcated. Peripheral nerve involvement is pronounced and may be severe. Unlike lepromatous leprosy (LEPROSY, LEPROMATOUS), the lepromin test is positive. Tuberculoid leprosy is rarely a source of infection to others.[accessedResource: MSH:D015441][accessDate: 04-11-2010]
Leprosies, Macular
James Malone
MDAMB231
ZFS:0000011
blastula 1k-cell
James Malone
[H][C@]12[C@H](OC(=O)c3ccccc3)[C@]3(O)C[C@H](OC(=O)[C@H](O)[C@@H](NC(=O)c4ccccc4)c4ccccc4)C(C)=C([C@@H](OC(C)=O)C(=O)[C@]1(C)[C@@H](O)C[C@H]1OC[C@@]21OC(C)=O)C3(C)C
http://www.ebi.ac.uk/efo/EFO_0001622
CHEBI:45863
Antineoplastic agent isolated from the bark of the Pacific yew tree, Taxus brevifolia. Note that the use of the name taxol is now limited, as Taxol is a registered trade mark.
James Malone
4alpha,10beta-bis(acetyloxy)-13alpha-[(2S,3S)-3-(benzoylamino)-2-hydroxy-3-phenylpropanoyloxy]-1,7beta-dihydroxy-9-oxo-5beta,20-epoxytax-11-en-2alpha-yl benzoate
(2aR-(2aalpha,4beta,4abeta,6beta,9alpha(alpha R*,betaS*),11alpha,12alpha,12balpha))-beta-(Benzoylamino)-alpha-hydroxybenzenepropanoic acid 6,12b-bis(acetyloxy)-12-(benzoyloxy)-2a,3,4,4a,5,6,9,10,11,12,12a,12b-dodecahydro-4,11-dihydroxy-4a,8,13,13-tetramethyl-5-oxo-7,11-methano-1H-cyclodeca(3,4)benz(1,2-b)oxet-9-yl ester
Taxol A
5beta,20-Epoxy-1,2-alpha,4,7beta,10beta,13alpha-hexahydroxytax-11-en-9-one 4,10-diacetate 2-benzoate 13-ester with (2R,3S)-N-benzoyl-3-phenylisoserine
InChIKey=RCINICONZNJXQF-GXKQXQCDDN
Paclitaxel
Antineoplastic agent isolated from the bark of the Pacific yew tree, Taxus brevifolia.
InChI=1/C47H51NO14/c1-25-31(60-43(56)36(52)35(28-16-10-7-11-17-28)48-41(54)29-18-12-8-13-19-29)23-47(57)40(61-42(55)30-20-14-9-15-21-30)38-45(6,32(51)22-33-46(38,24-58-33)62-27(3)50)39(53)37(59-26(2)49)34(25)44(47,4)5/h7-21,31-33,35-38,40,51-52,57H,22-24H2,1-6H3,(H,48,54)/t31-,32-,33+,35-,36+,37+,38-,40-,45+,46-,47+/m0/s1/f/h48H
taxol
C47H51NO14
An experiment where proteins in a sample are detected, quantified or otherwise analysed, e.g. antibody profiling using an array based technology
proteomic profiling by array
GM07056
James Malone
James Malone
EMAPA:17950
EHDAA:7009
EV:0100097
BTO:0001409
FMAID:9704
MA:0000378
Organ with organ cavity which connects the renal sinus to the urinary bladder. Examples: There are only two ureters, the right and the left ureters.
The tube that carries urine from the kidney to the bladder.
WBbt:0005777
The tube that carries urine from the kidney to the bladder.[accessedResource: BTO:0001409][accessDate: 04-11-2010]
WBbt:0004540
XAO:0000144
ureter
RPMI8226
James Malone
Ele Holloway
Natural Language Generator 8th April 2010
LC-1F
Ele Holloway
James Malone
A LC-1F is a cell line.
A LC-1F is both something that is bearer of a squamous cell lung carcinoma, and something that derives from
a Homo sapiens.
MAT:0000479
cranial placodes
A placode is a tissue modifier describing the thickening of embryonic ectoderm from which a definitive structure develops. For example, the cranial placodes.
placode
James Malone
GM12892
A GM12892 is a cell line.
A GM12892 is all of the following: something that has as quality a female, something that derives from Homo sapiens, and something that derives from a b cell.
Natural Language Generator 8th April 2010
James Malone
A data transformation is a process which produces output data from input data
data processing
http://www.ebi.ac.uk/efo/EFO_0000393
data analysis
A data transformation is a process which produces output data from input data - e.g. the application of a clustering protocol to microarray data or the application of a statistical testing method on a primary data set to determine a p-value.
James Malone
OBI_0200000
data transformation
WM115
James Malone
Ele Holloway
NCI-H358
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158751&type=germplasm
CS57727 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158751&type=germplasm
CS57727
James Malone
MOLT4
MOLT-4
James Malone
2-chloro-2-difluoromethoxy-1,1,1-trifluoroethane
James Malone
An organofluorine compound that has formula C3H2ClF5O.
InChI=1/C3H2ClF5O/c4-1(3(7,8)9)10-2(5)6/h1-2H
isofluranum
1-chloro-2,2,2-trifluoroethyl difluoromethyl ether
Ethane
InChIKey=PIWKPBJCKXDKJR-UHFFFAOYAP
http://www.ebi.ac.uk/efo/EFO_0001559
CHEBI:6015
isoflurane
isoflurano
FC(F)OC(Cl)C(F)(F)F
Aerrane
Forane
Forene
C3H2ClF5O
DOID:2608
phyllodes tumor
[M]Cystosarcoma phyllodes NOS (morphologic abnormality)
A type of connective tissue neoplasm arising from intralobular stroma of the BREAST. It is characterized by the rapid enlargement of an asymmetric firm mobile mass. Histologically, its leaf-like stromal clefts are lined by EPITHELIAL CELLS.[accessedResource: MSH:D003557][accessDate: 04-11-2010]
Malignant Cystosarcoma Phyllodes[accessedResource: MSH:D003557][accessDate: 04-11-2010]
MSH:D003557
Phyllodes Neoplasm
A benign, borderline, or malignant fibroepithelial neoplasm arising from the breast and rarely the prostate gland. It may recur following resection. The recurrence rates are higher for borderline and malignant phyllodes tumors. In borderline and malignant phyllodes tumors metastases to distant anatomic sites can occur. The incidence of metastases is higher in malignant phyllodes tumors.[accessedResource: NCIt:C2977][accessDate: 04-11-2010]
Phyllodes tumor, borderline (morphologic abnormality)[accessedResource: SNOMEDCT:71232009][accessDate: 04-11-2010]
Phyllodes tumour[accessedResource: SNOMEDCT:71232009][accessDate: 04-11-2010]
Cystosarcoma Phyllodes, Malignant
Phyllodes tumour
NCIt:C2977
Phyllodes Tumors
Cystosarcoma phyllodes, NOS
SNOMEDCT:71232009
Phyllodes Tumors[accessedResource: MSH:D003557][accessDate: 04-11-2010]
Phyllodes tumor, borderline
A type of connective tissue neoplasm arising from intralobular stroma of the BREAST. It is characterized by the rapid enlargement of an asymmetric firm mobile mass. Histologically, its leaf-like stromal clefts are lined by EPITHELIAL CELLS.
James Malone
[M]Cystosarcoma phyllodes NOS
Phyllodes neoplasm[accessedResource: DOID:2608][accessDate: 04-11-2010]
Phyllodes tumour, borderline[accessedResource: SNOMEDCT:71232009][accessDate: 04-11-2010]
Cystosarcoma Phylloides[accessedResource: MSH:D003557][accessDate: 04-11-2010]
Cystosarcoma phyllodes
Phyllodes tumor, NOS
Cystosarcoma Phyllodes[accessedResource: MSH:D003557][accessDate: 04-11-2010]
GeneRIF:15044924
Cystosarcoma phyllodes NOS (morphologic abnormality)
[M]Cystosarcoma phyllodes NOS[accessedResource: SNOMEDCT:189825002][accessDate: 04-11-2010]
Phyllodes tumor, NOS[accessedResource: SNOMEDCT:71232009][accessDate: 04-11-2010]
Phyllodes tumour, borderline
A benign, borderline, or malignant fibroepithelial neoplasm arising from the breast and rarely the prostate gland. It may recur following resection. The recurrence rates are higher for borderline and malignant phyllodes tumors. In borderline and malignant phyllodes tumors metastases to distant anatomic sites can occur. The incidence of metastases is higher in malignant phyllodes tumors.
Phyllodes tumor, borderline (morphologic abnormality)
Cystosarcoma phyllodes NOS (morphologic abnormality)[accessedResource: DOID:2608][accessDate: 04-11-2010]
SNOMEDCT:189825002
Cystosarcoma Phylloides
Phyllodes tumor, borderline[accessedResource: SNOMEDCT:71232009][accessDate: 04-11-2010]
Cystosarcoma phyllodes, NOS[accessedResource: DOID:2608][accessDate: 04-11-2010]
[M]Cystosarcoma phyllodes NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189825002][accessDate: 04-11-2010]
James Malone
lateral geniculate nucleus
Lateral geniculate body
MA:0000869
Lateral geniculate body[accessedResource: FMA:62209][accessDate: 04-11-2010]
FMA:62209
Lateral geniculate complex
Narcoleptic Syndromes
Narcolepsy NOS[accessedResource: DOID:8986][accessDate: 04-11-2010]
Narcoleptic Syndrome[accessedResource: MSH:D009290][accessDate: 04-11-2010]
Syndromes, Gelineau's[accessedResource: MSH:D009290][accessDate: 04-11-2010]
Syndrome, Narcolepsy-Cataplexy
Narcolepsy-Cataplexy Syndrome[accessedResource: MSH:D009290][accessDate: 04-11-2010]
A condition characterized by recurrent episodes of daytime somnolence and lapses in consciousness (microsomnias) that may be associated with automatic behaviors and AMNESIA. CATAPLEXY; SLEEP PARALYSIS, and hypnagogic HALLUCINATIONS frequently accompany narcolepsy. The pathophysiology of this disorder includes sleep-onset rapid eye movement (REM) sleep, which normally follows stage III or IV sleep. (From Neurology 1998 Feb;50(2 Suppl 1):S2-S7)[accessedResource: MSH:D009290][accessDate: 04-11-2010]
Syndromes, Narcolepsy-Cataplexy[accessedResource: MSH:D009290][accessDate: 04-11-2010]
Gelineau's Syndrome
Narcolepsy NOS
paroxysmal sleep[accessedResource: DOID:8986][accessDate: 04-11-2010]
GeneRIF:12601524
DOID:8986
GeneRIF:14769912
Syndrome, Gelineau[accessedResource: MSH:D009290][accessDate: 04-11-2010]
GeneRIF:15453542
Gelineau Syndrome
Syndrome, Narcoleptic
Gelineau's Syndrome[accessedResource: MSH:D009290][accessDate: 04-11-2010]
Syndromes, Gelineau's
GeneRIF:15070772
Paroxysmal Sleep
Narcolepsy (disorder)
narcolepsy
James Malone
A condition characterized by recurrent episodes of daytime somnolence and lapses in consciousness (microsomnias) that may be associated with automatic behaviors and AMNESIA. CATAPLEXY; SLEEP PARALYSIS, and hypnagogic HALLUCINATIONS frequently accompany narcolepsy. The pathophysiology of this disorder includes sleep-onset rapid eye movement (REM) sleep, which normally follows stage III or IV sleep. (From Neurology 1998 Feb;50(2 Suppl 1):S2-S7)
GeneRIF:15985489
ICD9:347.0
GeneRIF:11796186
Narcolepsy, without cataplexy
Syndromes, Narcoleptic[accessedResource: MSH:D009290][accessDate: 04-11-2010]
MSH:D009290
GeneRIF:15091316
Narcolepsy-Cataplexy Syndromes
GeneRIF:12414876
GeneRIF:12535955
GeneRIF:12823767
GeneRIF:15157381
Narcolepsy, without cataplexy[accessedResource: DOID:8986][accessDate: 04-11-2010]
Narcolepsy (disorder)[accessedResource: DOID:8986][accessDate: 04-11-2010]
HP:0008200
DOID:11202
primary hyperparathyroidism (disorder)
primary hyperparathyroidism (disorder)[accessedResource: DOID:11202][accessDate: 04-11-2010]
primary hyperparathyroidism
Tomasz Adamusiak
Ele Holloway
1.8
true
obsolete_THP1
James Malone
duplicate of EFO_0001253
A biological agent that causes disease or illness to its host
pathogen
James Malone
A drug used to treat rheumatoid arthritis.
CHEBI:35842
http://www.ebi.ac.uk/efo/EFO_0001487
James Malone
antirheumatic drugs
antirheumatic agent
anti-rheumatic drugs
antirheumatic drug
CHEBI:35842
Juvenile idiopathic arthritis (disorder)
juvenile arthritis[accessedResource: DOID:677][accessDate: 04-11-2010]
Juvenile rheumatoid a.
Ele Holloway
DOID:677
Juvenile idiopathic arthritis (disorder)[accessedResource: DOID:677][accessDate: 04-11-2010]
Juvenile rheumatoid arthritis (disorder)
Juvenile chronic arthritis (disorder)
Juvenile rheumatoid arthritis NOS (disorder)
Juvenile chronic arthritis (disorder)[accessedResource: DOID:677][accessDate: 04-11-2010]
Juvenile Rheumatoid Arthritis
Juvenile seropositive polyarthritis
Juvenile rheumatoid arthritis NOS (disorder)[accessedResource: DOID:677][accessDate: 04-11-2010]
juvenile arthritis
Tomasz Adamusiak
Juvenile rheumatoid a.[accessedResource: DOID:677][accessDate: 04-11-2010]
Juvenile rheumatoid arthritis, NOS
Juvenile rheumatoid arthritis[accessedResource: DOID:677][accessDate: 04-11-2010]
Juvenile seropositive polyarthritis[accessedResource: DOID:677][accessDate: 04-11-2010]
Juvenile rheumatoid arthritis, NOS[accessedResource: DOID:677][accessDate: 04-11-2010]
Juvenile rheumatoid arthritis (disorder)[accessedResource: DOID:677][accessDate: 04-11-2010]
chronic childhood arthritis
NCIt:C2855
A neoplasm arising from the epithelium. It may be encapsulated or non-encapsulated but non-invasive. The neoplastic epithelial cells may or may not display cellular atypia or dysplasia. In the gastrointestinal tract, when dysplasia becomes severe it is sometimes called carcinoma in situ. Representative examples are pituitary gland adenoma, follicular adenoma of the thyroid gland, and adenomas (or adenomatous polyps) of the gastrointestinal tract.
A neoplasm arising from the epithelium. It may be encapsulated or non-encapsulated but non-invasive. The neoplastic epithelial cells may or may not display cellular atypia or dysplasia. In the gastrointestinal tract, when dysplasia becomes severe it is sometimes called carcinoma in situ. Representative examples are pituitary gland adenoma, follicular adenoma of the thyroid gland, and adenomas (or adenomatous polyps) of the gastrointestinal tract.[accessedResource: NCIt:C2855][accessDate: 04-11-2010]
adenoma
James Malone
A phthalate ester that has formula C16H22O4.
phthalic acid, 2-ethylhexyl ester
(2-ethylhexyl) hydrogen phthalate
http://www.ebi.ac.uk/efo/EFO_0001574
InChIKey=DJDSLBVSSOQSLW-HCKMINDGCL
C16H22O4
2-Ethylhexyl phthalate
InChI=1/C16H22O4/c1-3-5-8-12(4-2)11-20-16(19)14-10-7-6-9-13(14)15(17)18/h6-7,9-10,12H,3-5,8,11H2,1-2H3,(H,17,18)/f/h17H
1,2-benzenedicarboxylic acid, mono(2-ethylhexyl) ester
monoethylhexyl phthalate
2-([(2-ethylhexyl)oxy]carbonyl)benzoic acid
MEHP
CCCCC(CC)COC(=O)c1ccccc1C(O)=O
mono-2-ethylhexyl phthalate
2-(2-ethylhexyloxycarbonyl)benzoic acid
CHEBI:17243
FMAID:3786
Thoracic part of aorta
Thoracic part of aorta[accessedResource: FMAID:3786][accessDate: 04-11-2010]
thoracic aorta
Tomasz Adamusiak
Jie Zheng
NIFSTD:birnlex_695
NIFSTD:birnlex_438
MIAA:0000402
infant
Tomasz Adamusiak
James Malone
http://jaxmice.jax.org/strain/009289.html
ILSXISS103/TejJ
Tomasz Adamusiak
Squamous cell carcinoma, keratinising[accessedResource: SNOMEDCT:18048008][accessDate: 04-11-2010]
DOID:5521
NCIt:C4105
Squamous cell carcinoma, keratinizing, NOS[accessedResource: SNOMEDCT:18048008][accessDate: 04-11-2010]
Keratinizing squamous cell carcinoma - large cell
[M]Squamous cell carcinoma, keratinising type NOS[accessedResource: SNOMEDCT:18048008][accessDate: 04-11-2010]
keratinizing squamous cell carcinoma
[M]Squamous cell carcinoma, keratinizing type NOS[accessedResource: SNOMEDCT:18048008][accessDate: 04-11-2010]
SNOMEDCT:18048008
Squamous cell carcinomas with morphologically prominent production of keratin.
Squamous cell carcinoma, keratinizing, NOS
Epidermoid carcinoma, keratinizing[accessedResource: SNOMEDCT:18048008][accessDate: 04-11-2010]
[M]Squamous cell carcinoma, keratinising type NOS
squamous cell carcinoma, keratinizing (morphologic abnormality)[accessedResource: DOID:5521][accessDate: 04-11-2010]
James Malone
Keratinizing squamous cell carcinoma - large cell[accessedResource: SNOMEDCT:18048008][accessDate: 04-11-2010]
Epidermoid carcinoma, keratinising[accessedResource: SNOMEDCT:18048008][accessDate: 04-11-2010]
Keratinising squamous cell carcinoma
[M]Squamous cell carcinoma, keratinizing type NOS
Epidermoid carcinoma, keratinizing
Keratinising epidermoid carcinoma
Squamous cell carcinoma, keratinizing (morphologic abnormality)
Squamous cell carcinomas with morphologically prominent production of keratin.[accessedResource: NCIt:C4105][accessDate: 04-11-2010]
Squamous cell carcinoma, large cell, keratinising[accessedResource: SNOMEDCT:18048008][accessDate: 04-11-2010]
Squamous cell carcinoma, large cell, keratinising
Ele Holloway
James Malone
CAL54
SKNDZ
James Malone
Ele Holloway
Malignant Melanoma of Skin Stage Unspecified
GeneRIF:12011132
SNOMEDCT:190105009
skin melanoma[accessedResource: DOID:8923][accessDate: 04-11-2010]
MALIG MELANOMA SKIN NEC[accessedResource: ICD9:172.8][accessDate: 04-11-2010]
Melanoma of the Skin[accessedResource: NCIt:C3510][accessDate: 04-11-2010]
ICD9:172.3
A primary melanoma arising from atypical melanocytes in the skin. Precursor lesions include acquired and congenital melanocytic nevi, and dysplastic nevi. Several histologic variants have been recognized, including superficial spreading melanoma, acral lentiginous melanoma, nodular melanoma, and lentigo maligna melanoma.[accessedResource: NCIt:C3510][accessDate: 04-11-2010]
Malignant Melanoma of Skin
Malignant melanoma of skin of other and unspecified parts of face[accessedResource: ICD9:172.3][accessDate: 04-11-2010]
Malignant Cutaneous Melanoma[accessedResource: NCIt:C3510][accessDate: 04-11-2010]
Malignant melanoma of skin, NOS
GeneRIF:15057044
Melanoma of skin, site unspecified
Malignant melanoma of other specified sites of skin
Malignant melanoma of other specified skin site[accessedResource: SNOMEDCT:188080004][accessDate: 04-11-2010]
DOID:8923
MALIG MELANOMA SKIN NEC
MALIG MELANOMA SKIN NOS
Malignant Cutaneous Melanoma
MALIG MELANOMA SKIN NOS[accessedResource: ICD9:172.9][accessDate: 04-11-2010]
SNOMEDCT:188080004
ICD9:172
Malignant melanoma of other specified skin site
MAL MELANOM FACE NEC/NOS
Melanoma of the Skin
[X]Malignant melanoma of skin, unspecified (disorder)
GeneRIF:14714570
GeneRIF:12376526
Malignant melanoma of skin[accessedResource: ICD9:172][accessDate: 04-11-2010]
Malignant melanoma of skin (disorder)
GeneRIF:12067203
ICD9:172.8
Malignant melanoma of other specified skin site (disorder)
Malignant melanoma of other specified sites of skin[accessedResource: ICD9:172.8][accessDate: 04-11-2010]
cancer of skin
Malignant melanoma of skin NOS (disorder)
MAL MELANOM FACE NEC/NOS[accessedResource: ICD9:172.3][accessDate: 04-11-2010]
NCIt:C3510
GeneRIF:12459644
[X]Malignant melanoma of skin, unspecified
Melanoma of Skin[accessedResource: NCIt:C3510][accessDate: 04-11-2010]
GeneRIF:15751018
GeneRIF:11841484
Malignant melanoma of other specified skin site (disorder)[accessedResource: SNOMEDCT:188080004][accessDate: 04-11-2010]
SNOMEDCT:188082007
MM - Malignant melanoma of skin
[X]Malignant melanoma of skin, unspecified (disorder)[accessedResource: SNOMEDCT:190105009][accessDate: 04-11-2010]
James Malone
Malignant melanoma of skin (disorder)[accessedResource: SNOMEDCT:93655004][accessDate: 04-11-2010]
ICD9:172.9
GeneRIF:15743033
[X]Malignant melanoma of skin, unspecified[accessedResource: SNOMEDCT:190105009][accessDate: 04-11-2010]
MM - Malignant melanoma of skin[accessedResource: SNOMEDCT:93655004][accessDate: 04-11-2010]
Malignant melanoma of skin NOS (disorder)[accessedResource: SNOMEDCT:188082007][accessDate: 04-11-2010]
Malignant Melanoma (of Skin), Stage Unspecified[accessedResource: NCIt:C3510][accessDate: 04-11-2010]
GeneRIF:12778069
Melanoma of Skin
A primary melanoma arising from atypical melanocytes in the skin. Precursor lesions include acquired and congenital melanocytic nevi, and dysplastic nevi. Several histologic variants have been recognized, including superficial spreading melanoma, acral lentiginous melanoma, nodular melanoma, and lentigo maligna melanoma.
Melanoma of skin, site unspecified[accessedResource: ICD9:172.9][accessDate: 04-11-2010]
SNOMEDCT:93655004
Skin Melanoma
Malignant melanoma of skin of other and unspecified parts of face
cutaneous melanoma
Malignant melanoma of skin NOS[accessedResource: SNOMEDCT:188082007][accessDate: 04-11-2010]
colony forming unit erythroid
erythroid stem cell[accessedResource: CL:0000038][accessDate: 04-11-2010]
blast forming unit erythroid[accessedResource: CL:0000038][accessDate: 04-11-2010]
erythroid stem cell
A progenitor cell committed to the erythroid lineage. This cell is ter119-positive but lacks expression of other hematopoietic lineage markers (lin-negative).
Tomasz Adamusiak
CFU-E[accessedResource: CL:0000038][accessDate: 04-11-2010]
burst forming unit erythroid
burst forming unit erythroid[accessedResource: CL:0000038][accessDate: 04-11-2010]
CL:0000038
A progenitor cell committed to the erythroid lineage. This cell is ter119-positive but lacks expression of other hematopoietic lineage markers (lin-negative).[accessedResource: CL:0000038][accessDate: 04-11-2010]
blast forming unit erythroid
CFU-E
BFU-E
A progenitor cell committed to the erythroid lineage.
colony forming unit erythroid[accessedResource: CL:0000038][accessDate: 04-11-2010]
erythroid progenitor cell
BFU-E[accessedResource: CL:0000038][accessDate: 04-11-2010]
ArrayExpress production team
An assay where an antigen array is used (antigens deposited on the array) to detect, quantify or otherwise analyse antibodies in solution.
antigen profiling
James Malone
IMR-32
An IMR 32 is a cell line.
An IMR 32 is both something that is bearer of a neuroblastoma, and something that derives from a
neuroblast sensu vertebrata.
Natural Language Generator 8th April 2010
James Malone
MKN45 cell
JCRB0254
James Malone
MKN-45
Human gastric adenocarcinoma, established from the poorly differentiated adenocarcinoma of the stomach (medullary type) of a 62-year-old woman.[accessedResource: BTO:0001225][accessDate: 04-11-2010]
MKN45 cell[accessedResource: BTO:0001225][accessDate: 04-11-2010]
Human gastric adenocarcinoma, established from the poorly differentiated adenocarcinoma of the stomach (medullary type) of a 62-year-old woman.
MKN-45 cell[accessedResource: BTO:0001225][accessDate: 04-11-2010]
MKN45
BTO:0001225
MKN-45 cell
Ele Holloway
12-oxophytodienoic acid
OPDA
http://www.ebi.ac.uk/efo/EFO_0002482
James Malone
InChIKey=PMTMAFAPLCGXGK-VSUHVYTRDP
CC\\C=C/C[C@@H]1[C@H](CCCCCCCC(O)=O)C=CC1=O
(9R,13R)-12-oxo-phytodienoic acid
InChI=1/C18H28O3/c1-2-3-7-11-16-15(13-14-17(16)19)10-8-5-4-6-9-12-18(20)21/h3,7,13-16H,2,4-6,8-12H2,1H3,(H,20,21)/b7-3-/t15-,16-/m1/s1/f/h20H
8-{(1R,5R)-4-oxo-5-[(2Z)-pent-2-en-1-yl]cyclopent-2-en-1-yl}octanoic acid
C18H28O3
CHEBI:34005
The (9R,13R)-diastereomer of 12-oxophytodienoic acid.
Ele Holloway
true
The genotype of the individual organism from which the biomaterial was derived. Individual genetic characteristics include polymorphisms, disease alleles, and haplotypes.
obsolete_individual genetic characteristic
KLE
James Malone
Ele Holloway
SW1463
James Malone
Ele Holloway
BTO:0000271
colonic mucosa
colonic mucosa[accessedResource: BTO:0000271][accessDate: 04-11-2010]
colon mucosa
Tomasz Adamusiak
Strain or line specific to yeast
yeast
James Malone
BTO:0001376
1: The proximal segment of the vertebrate hind limb extending from the hip to the knee and supported by a single large bone. n2: The segment of the leg immediately distal to the thigh in a bird or in a quadruped in which the true thigh is obscured.
1: The proximal segment of the vertebrate hind limb extending from the hip to the knee and supported by a single large bone. n2: The segment of the leg immediately distal to the thigh in a bird or in a quadruped in which the true thigh is obscured.[accessedResource: BTO:0001376][accessDate: 04-11-2010]
thigh
James Malone
hypoglycemic agent
antidiabetic
http://www.ebi.ac.uk/efo/EFO_0001844
CHEBI:35526
A drug which lowers the blood glucose level.
hypoglycemic drug
James Malone
B cell derived cell line
CL:0000077
Mesotheliocyte
A flattened epithelial cell of mesenchymal origin that lines the serous cavity.
Mesotheliocyte[accessedResource: CL:0000077][accessDate: 04-11-2010]
A flattened epithelial cell of mesenchymal origin that lines the serous cavity.[accessedResource: CL:0000077][accessDate: 04-11-2010]
mesothelial cell
James Malone
SW900
James Malone
Ele Holloway
GM11992
James Malone
ArrayExpress Team
RNA-seq
An assay in which sequencing technology (e.g. Solexa/454) is used to generate RNA sequence, analyse the transcibed regions of the genome, and or to quantitate transcript abundance
transcription profiling by high throughput sequencing
James Malone
FMA:69072
mesoderm
James Malone
CHEBI:15929
methyl {(1R,2R)-3-oxo-2-[(2Z)-pent-2-en-1-yl]cyclopentyl}acetate
3-oxo-2-(2-pentenyl)cyclopentaneacetic acid methyl ester
Ele Holloway
methyl (-)-jasmonate
CC\\C=C/C[C@@H]1[C@H](CCC1=O)CC(=O)OC
InChIKey=GEWDNTWNSAZUDX-WQMVXFAEBM
C13H20O3
James Malone
http://www.ebi.ac.uk/efo/EFO_0002413
InChI=1/C13H20O3/c1-3-4-5-6-11-10(7-8-12(11)14)9-13(15)16-2/h4-5,10-11H,3,6-9H2,1-2H3/b5-4-/t10-,11-/m1/s1
A jasmonate ester that has formula C13H20O3.
James Malone
HMEC S1
microliter
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ul[accessedResource: MO_926][accessDate: 04-11-2010]
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ul
http://www.ebi.ac.uk/efo/EFO_0001717
A volume unit which is equal to one millionth of a liter or 10^[-6] L.
true
Tomasz Adamusiak
A microliter is a volume unit which is equal to one millionth of a liter or 10^-6 L.
MO_926
ul
James Malone
µl
CL:0000765
A nucleated precursor of an erythrocyte that lacks hematopoietic lineage markers.[accessedResource: CL:0000765][accessDate: 04-11-2010]
normoblast
normoblast[accessedResource: CL:0000765][accessDate: 04-11-2010]
A nucleated precursor of an erythrocyte that lacks hematopoietic lineage markers.
erythroblast
A nucleated precursor of an erythrocyte.
James Malone
An inorganic peroxide that has formula H2O2.
[OH(OH)]
Oxydol
dihydrogen dioxide
dihydrogen(peroxide)
[H]OO[H]
H2O2
dioxidane
H(2)O(2)
bis(hydridooxygen)(O--O)
InChI=1/H2O2/c1-2/h1-2H
InChIKey=MHAJPDPJQMAIIY-UHFFFAOYAL
CHEBI:16240
http://www.ebi.ac.uk/efo/EFO_0001553
hydrogen peroxide
HOOH
trichostatin A
TSA
CHEBI:46024
A trichostatin that has formula C17H22N2O3.
InChIKey=RTKIYFITIVXBLE-LPBLKGKXDH
(2E,4E,6R)-7-(4-(dimethylamino)phenyl)-N-hydroxy-4,6-dimethyl-7-oxo-2,4-heptadienamide
C17H22N2O3
James Malone
(2E,4E,6R)-7-[4-(dimethylamino)phenyl]-N-hydroxy-4,6-dimethyl-7-oxohepta-2,4-dienamide
C[C@@H](C(=O)c1ccc(cc1)N(C)C)\\C=C(C)\\C=C\\C(=O)NO
http://www.ebi.ac.uk/efo/EFO_0001630
InChI=1/C17H22N2O3/c1-12(5-10-16(20)18-22)11-13(2)17(21)14-6-8-15(9-7-14)19(3)4/h5-11,13,22H,1-4H3,(H,18,20)/b10-5+,12-11+/t13-/m1/s1/f/h18H
http://sig.biostr.washington.edu/fma3.0#Retroperitoneal_space
retroperitoneum space
The retroperitoneum (or extraperitoneum) is the anatomical space in the abdominal cavity behind (retro) the peritoneum. [wikipedia: http://en.wikipedia.org/wiki/Retroperitoneum]
retroperitoneum
James Malone
Unspecified bacteraemia[accessedResource: DOID:2294][accessDate: 04-11-2010]
Unspecified bacteraemia
Bacteremia (disorder)
Unspecified bacteremia (context-dependent category)[accessedResource: DOID:2294][accessDate: 04-11-2010]
Bacteremia NOS (disorder)
DOID:2294
Tomasz Adamusiak
Bacteremia, NOS[accessedResource: DOID:2294][accessDate: 04-11-2010]
Bacteremia NOS (disorder)[accessedResource: DOID:2294][accessDate: 04-11-2010]
Unspecified bacteremia (context-dependent category)
Bacteremia (disorder)[accessedResource: DOID:2294][accessDate: 04-11-2010]
Unspecified bacteremia
bacteremia
Unspecified bacteremia[accessedResource: DOID:2294][accessDate: 04-11-2010]
bacteremia[accessedResource: DOID:2294][accessDate: 04-11-2010]
Bacteremia, NOS
bacteriemia
GeneRIF:12711118
A usually aggressive carcinoma composed of large malignant cells which display neuroendocrine characteristics. It is characterized by the presence of high mitotic activity and necrotic changes. The vast majority of cases are positive for neuron-specific enolase. Representative examples include lung, breast, cervical, and thymic neuroendocrine carcinomas.[accessedResource: NCIt:C6875][accessDate: 04-11-2010]
large cell neuroendocrine carcinoma
SNOMEDCT:128628002
Large cell neuroendocrine carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:128628002][accessDate: 04-11-2010]
Large cell neuroendocrine carcinoma (morphologic abnormality)
NCIt:C6875
James Malone
A usually aggressive carcinoma composed of large malignant cells which display neuroendocrine characteristics. It is characterized by the presence of high mitotic activity and necrotic changes. The vast majority of cases are positive for neuron-specific enolase. Representative examples include lung, breast, cervical, and thymic neuroendocrine carcinomas.
DOID:5721
GeneRIF:12605092
http://www.arabidopsis.org/servlets/TairObject?id=1005164919&type=germplasm
CS57923 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005164919&type=germplasm
CS57923
James Malone
http://jaxmice.jax.org/strain/009310.html
ILSXISS56/TejJ
Tomasz Adamusiak
R18
James Malone
birnlex_7083
Theiler stage 28
Tomasz Adamusiak
Jie Zheng
true
Tomasz Adamusiak
A meter is a length unit which is equal to the length of the path traveled by light in vacuum during a time interval of 1/299 792 458 of a second.
Jie Zheng
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#m[accessedResource: MO_367][accessDate: 04-11-2010]
MO_367
meter
m
A length unit which is equal to the length of the path traveled by light in vacuum during a time interval of 1/299 792 458 of a second.
metre
http://www.ebi.ac.uk/efo/EFO_0001685
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#m
birn_anat:nlx_anat_20090307
FMAID:77387
Shell region of nucleus accumbens
Shell region of nucleus accumbens[accessedResource: FMAID:77387][accessDate: 04-11-2010]
nucleus accumbens shell
Tomasz Adamusiak
A filamentous extension of an epidermal cell near the tip of a rootlet that functions in absorption of water and minerals.nSpecialized unicellular trichome found in roots.[accessedResource: BTO:0001804][accessDate: 04-11-2010]
PO:0000256
A filamentous extension of an epidermal cell near the tip of a rootlet that functions in absorption of water and minerals.nSpecialized unicellular trichome found in roots.
James Malone
root hair
BTO:0001804
MAT:0000352
http://www.arabidopsis.org/servlets/TairObject?id=1005158679&type=germplasm
CS57655 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158679&type=germplasm
CS57655
James Malone
ArrayExpress production team
An assay in which variation in the genome is analysed
genotyping
James Malone
1.8
true
obsolete_WI38
James Malone
Ele Holloway
Duplicate use EFO_0001260
squamous cell carcinoma NOS (morphologic abnormality)[accessedResource: DOID:1749][accessDate: 04-11-2010]
Planocellular Carcinoma
Squamous cell carcinoma, no ICD-O subtype[accessedResource: SNOMEDCT:28899001][accessDate: 04-11-2010]
Malignant Epidermoid Cell Tumor
GeneRIF:12452003
GeneRIF:15001836
GeneRIF:12168821
Squamous cell epithelioma
GeneRIF:15363037
GeneRIF:15920558
GeneRIF:14555508
GeneRIF:12860293
[M]Squamous cell carcinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189566008][accessDate: 04-11-2010]
GeneRIF:14985402
GeneRIF:15180941
GeneRIF:15830715
Squamous cell carcinoma (disorder)
GeneRIF:15811118
GeneRIF:12190814
GeneRIF:13679863
GeneRIF:12413951
GeneRIF:14961580
GeneRIF:12722480
GeneRIF:11875739
GeneRIF:14760079
GeneRIF:15252855
GeneRIF:12926130
GeneRIF:14707456
GeneRIF:14734465
[M]Squamous cell carcinoma NOS (morphologic abnormality)
Carcinomas, Epidermoid
Malignant Epidermoid Cell Neoplasm[accessedResource: NCIt:C2929][accessDate: 04-11-2010]
GeneRIF:15754018
GeneRIF:16201750
GeneRIF:14676802
GeneRIF:15568401
GeneRIF:15740587
GeneRIF:15579456
GeneRIF:14871981
GeneRIF:15756447
GeneRIF:14708636
GeneRIF:15870689
GeneRIF:12174888
GeneRIF:12115476
Malignant Epidermoid Cell Neoplasm
GeneRIF:15094779
GeneRIF:15585623
NCIt:C8999
GeneRIF:15197677
GeneRIF:15625067
GeneRIF:15878916
Epidermoid Cell Cancer
Squamous cell carcinoma (morphologic abnormality)
GeneRIF:12958179
GeneRIF:15184245
Squamous cell carcinoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:28899001][accessDate: 04-11-2010]
GeneRIF:15365571
GeneRIF:12194986
GeneRIF:15205458
GeneRIF:12632084
GeneRIF:12823440
squamous cell carcinoma (disorder)[accessedResource: DOID:1749][accessDate: 04-11-2010]
GeneRIF:12174890
GeneRIF:15254682
GeneRIF:12668285
GeneRIF:12879021
GeneRIF:12429789
GeneRIF:15170282
GeneRIF:12112307
GeneRIF:14981906
GeneRIF:14719077
GeneRIF:15059221
GeneRIF:15609307
SNOMEDCT:402815007
GeneRIF:12169394
GeneRIF:15551738
Planocellular Carcinomas
GeneRIF:11779227
GeneRIF:11788901
GeneRIF:12447480
GeneRIF:15184269
GeneRIF:12115490
GeneRIF:15767556
Epidermoid carcinoma, NOS[accessedResource: SNOMEDCT:28899001][accessDate: 04-11-2010]
GeneRIF:11959846
Epidermoid Carcinoma
GeneRIF:15200479
GeneRIF:12579289
SCC - Squamous cell carcinoma
GeneRIF:16024014
James Malone
GeneRIF:12787042
GeneRIF:15375751
GeneRIF:15832405
Malignant Epidermoid Cell Tumor[accessedResource: NCIt:C2929][accessDate: 04-11-2010]
GeneRIF:14981901
GeneRIF:12579497
squamous cell carcinoma (morphologic abnormality)[accessedResource: DOID:1749][accessDate: 04-11-2010]
GeneRIF:12474056
Malignant Squamous Cell Neoplasm
GeneRIF:12408753
GeneRIF:14607337
GeneRIF:16327980
GeneRIF:12748469
GeneRIF:16091114
GeneRIF:12700631
SNOMEDCT:28899001
GeneRIF:12824922
Malignant Squamous Cell Neoplasm[accessedResource: NCIt:C2929][accessDate: 04-11-2010]
GeneRIF:15073598
GeneRIF:15567470
GeneRIF:12878090
GeneRIF:12929940
GeneRIF:16142392
GeneRIF:15817070
GeneRIF:12029498
GeneRIF:11956617
GeneRIF:15492752
Planocellular Carcinoma[accessedResource: MSH:D002294][accessDate: 04-11-2010]
GeneRIF:12841867
GeneRIF:12372346
GeneRIF:12676577
Carcinomas, Squamous Cell
GeneRIF:14767526
Squamous cell carcinoma, no ICD-O subtype
GeneRIF:15033492
squamous cell carcinoma NOS (morphologic abnormality)
[M]Squamous cell carcinoma NOS[accessedResource: SNOMEDCT:189566008][accessDate: 04-11-2010]
GeneRIF:15331608
GeneRIF:15930346
GeneRIF:15173661
GeneRIF:14633701
GeneRIF:16035618
A carcinoma derived from stratified squamous epithelium. It may also occur in sites where glandular or columnar epithelium is normally present. (From Stedman, 25th ed)
MSH:D002294
GeneRIF:12269988
GeneRIF:12607604
GeneRIF:15161058
GeneRIF:12969350
GeneRIF:14517347
GeneRIF:15329319
Squamous cell carcinoma, no ICD-O subtype (morphologic abnormality)
GeneRIF:15856454
Carcinomas, Squamous Cell[accessedResource: MSH:D002294][accessDate: 04-11-2010]
Squamous carcinoma[accessedResource: SNOMEDCT:28899001][accessDate: 04-11-2010]
GeneRIF:14750174
GeneRIF:11836590
GeneRIF:14604894
GeneRIF:12060398
GeneRIF:12738984
Squamous cell carcinoma, NOS
GeneRIF:11814623
A carcinoma derived from stratified squamous epithelium. It may also occur in sites where glandular or columnar epithelium is normally present. (From Stedman, 25th ed)[accessedResource: MSH:D002294][accessDate: 04-11-2010]
GeneRIF:12694349
GeneRIF:15254763
Squamous cell carcinoma, NOS[accessedResource: SNOMEDCT:28899001][accessDate: 04-11-2010]
GeneRIF:12720100
GeneRIF:12527941
GeneRIF:15061963
GeneRIF:14702179
GeneRIF:15638360
GeneRIF:11957139
Malignant Squamous Cell Tumor
squamous cell carcinoma
GeneRIF:15254691
GeneRIF:15515019
GeneRIF:15201990
GeneRIF:15218300
Epidermoid Cell Cancer[accessedResource: NCIt:C2929][accessDate: 04-11-2010]
GeneRIF:15328184
Planocellular Carcinomas[accessedResource: MSH:D002294][accessDate: 04-11-2010]
GeneRIF:15328914
Squamous Cell Cancer[accessedResource: NCIt:C2929][accessDate: 04-11-2010]
GeneRIF:16211299
GeneRIF:15241500
GeneRIF:14997212
Squamous Carcinomas
GeneRIF:16172916
Squamous Cell Cancer
GeneRIF:14676801
GeneRIF:15709189
GeneRIF:11920472
GeneRIF:12452059
SNOMEDCT:189566008
GeneRIF:14993646
Epidermoid carcinoma, NOS
GeneRIF:12565178
GeneRIF:15201986
GeneRIF:12599217
GeneRIF:15526353
GeneRIF:12954496
GeneRIF:14733907
GeneRIF:15776189
GeneRIF:15254686
Squamous Cell Epithelioma[accessedResource: NCIt:C8999][accessDate: 04-11-2010]
SCC - Squamous cell carcinoma[accessedResource: SNOMEDCT:28899001][accessDate: 04-11-2010]
GeneRIF:15390192
A carcinoma arising from squamous epithelial cells. Morphologically, it is characterized by the proliferation of atypical, often pleomorphic squamous cells. Squamous cell carcinomas are graded by the degree of cellular differentiation as well, moderately, or poorly differentiated. Well differentiated carcinomas are usually associated with keratin production and the presence of intercellular bridges between adjacent cells. Representative examples are lung squamous cell carcinoma, skin squamous cell carcinoma, and cervical squamous cell carcinoma.[accessedResource: NCIt:C2929][accessDate: 04-11-2010]
GeneRIF:16127291
GeneRIF:15826242
GeneRIF:15140235
GeneRIF:12851677
GeneRIF:14529662
GeneRIF:15217930
GeneRIF:15754020
GeneRIF:15774758
GeneRIF:14604896
GeneRIF:12670508
GeneRIF:12727836
Malignant Squamous Cell Tumor[accessedResource: NCIt:C2929][accessDate: 04-11-2010]
Carcinomas, Squamous[accessedResource: MSH:D002294][accessDate: 04-11-2010]
NCIt:C2929
GeneRIF:11960918
Epidermoid Carcinoma[accessedResource: MSH:D002294][accessDate: 04-11-2010]
GeneRIF:15388813
Epidermoid Carcinomas[accessedResource: MSH:D002294][accessDate: 04-11-2010]
GeneRIF:15943786
GeneRIF:16077964
GeneRIF:12479097
GeneRIF:11887018
GeneRIF:14567988
GeneRIF:12743035
GeneRIF:12964017
GeneRIF:15662526
A carcinoma arising from squamous epithelial cells. Morphologically, it is characterized by the proliferation of atypical, often pleomorphic squamous cells. Squamous cell carcinomas are graded by the degree of cellular differentiation as well, moderately, or poorly differentiated. Well differentiated carcinomas are usually associated with keratin production and the presence of intercellular bridges between adjacent cells. Representative examples are lung squamous cell carcinoma, skin squamous cell carcinoma, and cervical squamous cell carcinoma.
GeneRIF:15151617
GeneRIF:16012760
GeneRIF:16022908
squamous carcinoma
GeneRIF:12841598
GeneRIF:12792768
[M]Squamous cell carcinoma NOS
GeneRIF:14991744
GeneRIF:12270344
GeneRIF:12681285
GeneRIF:11982752
DOID:1749
GeneRIF:15816843
multipotent adult progenitor cell
CL:0000048
multifate stem cell
multi fate stem cell[accessedResource: CL:0000048][accessDate: 04-11-2010]
Multipotent cell
A stem cell that can give rise to multiple lineages of cells.
multipotent stem cell
multi-fate stem cell
multifate stem cell[accessedResource: CL:0000048][accessDate: 04-11-2010]
A stem cell that can give rise to multiple lineages of cells.[accessedResource: CL:0000048][accessDate: 04-11-2010]
James Malone
A stem cell that can give rise to mulitple lineages of cells.
Multipotent cell[accessedResource: CL:0000048][accessDate: 04-11-2010]
NCI-H2171
James Malone
Ele Holloway
antifungal drugs
antifungal agent
http://www.ebi.ac.uk/efo/EFO_0001855
CHEBI:35718
A substance that destroys fungi by suppressing their ability to grow or reproduce. Antifungal drugs differ from industrial fungicides in that they defend against fungi present in human or animal tissues.
antifungal drug
James Malone
The prefrontal cortex is the anterior part of the frontal lobes of the brain, lying in front of the motor and premotor areas.
prefrontal cortex
Prefrontal association cortex
BTO:0002807
FMAID:224850
Tomasz Adamusiak
James Malone
The prefrontal cortex is the anterior part of the frontal lobes of the brain, lying in front of the motor and premotor areas.[accessedResource: BTO:0002807][accessDate: 04-11-2010]
Prefrontal association cortex[accessedResource: FMAID:224850][accessDate: 04-11-2010]
Caudal is a geometric modifier which indicates a position towards the tail.
caudal
James Malone
NCIt:C32677
The soft tissue surrounding the neck of individual teeth as well as covering the alveolar bone. The tissue is fibrous and continuous with the periodontal ligament and mucosal covering.[accessedResource: NCIt:C32677][accessDate: 04-11-2010]
gingiva[accessedResource: BTO:0000519][accessDate: 04-11-2010]
James Malone
The tissue that surrounds the necks of teeth and covers the alveolar parts of the jaws; broadly: the alveolar portion of a jaw with its enveloping soft tissues.
gingiva
The tissue that surrounds the necks of teeth and covers the alveolar parts of the jaws; broadly: the alveolar portion of a jaw with its enveloping soft tissues.[accessedResource: BTO:0000519][accessDate: 04-11-2010]
gum
FMA:59762
The soft tissue surrounding the neck of individual teeth as well as covering the alveolar bone. The tissue is fibrous and continuous with the periodontal ligament and mucosal covering.
BTO:0000519
MAT:0000034
Arterial vessel
TAO:0000005
ZFA:0000005
Vessels that carry blood away from the heart.
Arterial tree organ part[accessedResource: FMAID:50720][accessDate: 04-11-2010]
EMAPA:16201
Any of the tubular branching muscular- and elastic-walled vessels that carry blood from the heart through the body.
artery
Arterial subtree[accessedResource: FMAID:50720][accessDate: 04-11-2010]
XAO:0000114
Vessels that carry blood away from the heart.[accessedResource: ZFA:0000005][accessDate: 04-11-2010]
MA:0000061
Subdivision of arterial tree (organ) which consists of branching sets of tubes (arterial trunk) that form a tree; together with other arterial trees (organ part), it constitutes an arterial tree (organ). Examples: pulmonary arterial tree, right coronary arterial tree, superior mesenteric tree.
Arterial subtree
FMAID:50720
BTO:0000573
arterial system[accessedResource: ZFA:0000005][accessDate: 04-11-2010]
arterial system
EV:0100026
Arterial tree organ part
Arterial vessel[accessedResource: FMAID:50720][accessDate: 04-11-2010]
EHDAA:396
Any of the tubular branching muscular- and elastic-walled vessels that carry blood from the heart through the body.[accessedResource: BTO:0000573][accessDate: 04-11-2010]
James Malone
MFO:0002900
A plant body that is characteristic of thallophytes , lacks differentiation into distinct members (as stem, leaves, and roots), and does not grow from an apical point.
James Malone
BTO:0001366
thallus
a primitive plant body of gametophytes that has not differentiated into roots, stems or leaves
MAT:0000248
a primitive plant body of gametophytes that has not differentiated into roots, stems or leaves[accessedResource: MAT:0000248][accessDate: 04-11-2010]
A plant body that is characteristic of thallophytes , lacks differentiation into distinct members (as stem, leaves, and roots), and does not grow from an apical point.[accessedResource: BTO:0001366][accessDate: 04-11-2010]
Ele Holloway
AZ521
JCRB0061
James Malone
AZ-521
MO_694
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#secreted_protein_identification_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#secreted_protein_identification_design[accessedResource: MO_694][accessDate: 04-11-2010]
secreted protein identification design
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158746&type=germplasm
CS57722 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158746&type=germplasm
CS57722
James Malone
MAT:0000488
Lateral is a geometric modifier describing something which is of or pertaining to the side.
lateral
James Malone
adipose tissue
FBbt:00005065
adipose system
SAEL:2
The system of organs and cells involved in fat storage.[accessedResource: FBbt:00005065][accessDate: 04-11-2010]
BTO:0001487
The system of organs and cells involved in fat storage.
fat tissue
adipose tissue[accessedResource: BTO:0001487][accessDate: 04-11-2010]
Connective tissue in which fat is stored and which has the cells distended by droplets of fat.
James Malone
MA:0000009
Connective tissue in which fat is stored and which has the cells distended by droplets of fat.[accessedResource: BTO:0001487][accessDate: 04-11-2010]
EV:0100382
An organ system pertaining to fat.
adipose system[accessedResource: FBbt:00005065][accessDate: 04-11-2010]
true
obsolete_pretreatment
primary motor cortex
somatomotor cortex
James Malone
Ele Holloway
A large, oval stomach epithelial cell with a central nucleus; source of gastric acid. Secretes HCl.
James Malone
CL:0000162
A large, oval stomach epithelial cell with a central nucleus; source of gastric acid. Secretes HCl.[accessedResource: CL:0000162][accessDate: 04-11-2010]
oxyntic cell[accessedResource: CL:0000162][accessDate: 04-11-2010]
oxyntic cell
parietal cell
M14 cell[accessedResource: BTO:0002805][accessDate: 04-11-2010]
BTO:0002805
The human melanoma cell line M14 has been established from surgically removed melanoma metastases.
M14 cell
The human melanoma cell line M14 has been established from surgically removed melanoma metastases.[accessedResource: BTO:0002805][accessDate: 04-11-2010]
Tomasz Adamusiak
M14
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Microgram_per_Kilogram_per_Day
MO_353
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mg_per_kg_per_day
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mg_per_kg_per_day[accessedResource: MO_353][accessDate: 04-11-2010]
milligram per kilogram per day
NCI-H2195
James Malone
Ele Holloway
A biopsy number is an information entity about the numerical label given to a partciular biopsy obtained.
biopsy number
James Malone
James Malone
pm
picometre
A picometer is a length unit which is equal to 1m x 10^-12.
picometer
http://www.ebi.ac.uk/efo/EFO_0001722
true
UO:0000020
A length unit which is equal to 10^[-12] m.
CHEBI:2666
InChI=1/C20H23N/c1-21(2)15-7-12-20-18-10-5-3-8-16(18)13-14-17-9-4-6-11-19(17)20/h3-6,8-12H,7,13-15H2,1-2H3
3-(10,11-dihydro-5H-dibenzo[a,d]cyclohepten-5-ylidene)-N,N-dimethylpropan-1-amine
http://www.ebi.ac.uk/efo/EFO_0001483
InChIKey=KRMDCWKBEZIMAB-UHFFFAOYAI
James Malone
A tricyclic antidepressant that has formula C20H23N.
C20H23N
5-(3-dimethylaminopropylidene)-10,11-dihydro-5H-dibenzo(a,d)cycloheptene
3-(10,11-dihydro-5H-dibenzo[a,d][7]annulen-5-ylidene)-N,N-dimethylpropan-1-amine
10,11-dihydro-N,N-dimethyl-5H-dibenzo(a,d)heptalene-Delta(5),gamma-propylamine
5-(3-dimethylaminopropylidene)-10,11-dihydro-5H-dibenzo(a,d)cycloheptatriene
5-(gamma-dimethylaminopropylidene)-5H-dibenzo[a,d][1,4]cycloheptadiene
3-(10,11-dihydro-5H-dibenzo(a,d)cyclohepten-5-ylidene)-N,N-dimethyl-1-propanamine
10,11-dihydro-5-(gamma-dimethylaminopropylidene)-5H-dibenzo(a,d)cycloheptene
Amitriptylin
amitriptyline
CN(C)CCC=C1c2ccccc2CCc2ccccc12
OntologyMappingImporter following MAT:0000220
PO:0020147
apical root meristem
MAT:0000220
ZEA:0015150
James Malone
Cell that line the inner and outer surfaces of the body by forming cellular layers (epithelium) or masses (MSH).[accessedResource: NIFSTD:sao441624014][accessDate: 04-11-2010]
epithelial
James Malone
Tomasz Adamusiak
Cell that cover the surface of the body and line its cavities.[accessedResource: BTO:0000414][accessDate: 04-11-2010]
A cell that is usually found in a two-dimensional sheet with a free surface.
Epitheliocyte
Epitheliocyte[accessedResource: CL:0000066][accessDate: 04-11-2010]
A cell that is usually found in a two-dimensional sheet with a free surface. The cell has a cytoskeleton that allows for tight cell to cell contact and for cell polarity where apical part is directed towards the lumen and the basal part to the basal lamina.
epithelial cell
A cell that is usually found in a two-dimensional sheet with a free surface. The cell has a cytoskeleton that allows for tight cell to cell contact and for cell polarity where apical part is directed towards the lumen and the basal part to the basal lamina.[accessedResource: CL:0000066][accessDate: 04-11-2010]
BTO:0000414
Cell that cover the surface of the body and line its cavities.
NIFSTD:sao441624014
CL:0000066
Cell that line the inner and outer surfaces of the body by forming cellular layers (epithelium) or masses (MSH).
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0002729
InChIKey=QUEDXNHFTDJVIY-DQCZWYHMBO
(2R)-3,4-dihydro-2,7,8-trimethyl-2-[(4R,8R)-4,8,12-trimethyltridecyl]-2H-1-benzopyran-6-ol
7,8-dimethyltocol
CC(C)CCC[C@@H](C)CCC[C@@H](C)CCC[C@]1(C)CCc2cc(O)c(C)c(C)c2O1
(2R)-2,7,8-trimethyl-2-[(4R,8R)-4,8,12-trimethyltridecyl]-3,4-dihydro-2H-chromen-6-ol
C28H48O2
gamma-tocopherol
CHEBI:18185
A tocopherol that has formula C28H48O2.
D-gamma-tocopherol
Ele Holloway
InChI=1/C28H48O2/c1-20(2)11-8-12-21(3)13-9-14-22(4)15-10-17-28(7)18-16-25-19-26(29)23(5)24(6)27(25)30-28/h19-22,29H,8-18H2,1-7H3/t21-,22-,28-/m1/s1
James Malone
Lens-shaped structure on the inner aspect of the internal capsule. The subthalamic nucleus and pathways traversing this region are concerned with the integration of somatic motor function. (MeSH)
subthalamic nucleus
Lens-shaped structure on the inner aspect of the internal capsule. The subthalamic nucleus and pathways traversing this region are concerned with the integration of somatic motor function. (MeSH)[accessedResource: NCIt:C12454][accessDate: 04-11-2010]
A biconvex mass of gray matter on the medial side of the junction of the internal capsule and the crus cerebri; its chief connections are with the globus pallidus.
nucleus subthalamicus
Luys' body
A biconvex mass of gray matter on the medial side of the junction of the internal capsule and the crus cerebri; its chief connections are with the globus pallidus.[accessedResource: BTO:0002252][accessDate: 04-11-2010]
BTO:0002252
Luys' body[accessedResource: BTO:0002252][accessDate: 04-11-2010]
NCIt:C12454
nucleus subthalamicus[accessedResource: BTO:0002252][accessDate: 04-11-2010]
nucleus of Luys
nucleus of Luys[accessedResource: BTO:0002252][accessDate: 04-11-2010]
ZFS:0000016
blastula 30%-epiboly
James Malone
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#atmosphere
atmosphere
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#atmosphere[accessedResource: MO_498][accessDate: 04-11-2010]
The atmospheric conditions used to culture or grow an organism.
Tomasz Adamusiak
MO_498
Jie Zheng
antiphospholipid syndrome
antiphospholipid antibody syndrome[accessedResource: DOID:2988][accessDate: 04-11-2010]
Antiphospholipid syndrome[accessedResource: DOID:2988][accessDate: 04-11-2010]
primary antiphospholipid syndrome
antiphospholipid antibody syndrome
DOID:2988
Antiphospholipid syndrome (disorder)
Antiphospholipid syndrome (disorder)[accessedResource: DOID:2988][accessDate: 04-11-2010]
antiphospholipid syndrome
James Malone
NCIt:C12445
Tomasz Adamusiak
BTO:0000232
A large dorsally projecting part of the brain concerned especially with the coordination of muscles and the maintenance of bodily equilibrium, situated between the brain stem and the back of the cerebrum , and formed in humans of two lateral lobes and a median lobe.
Cerebellar[accessedResource: NCIt:C12445][accessDate: 04-11-2010]
A large dorsally projecting part of the brain concerned especially with the coordination of muscles and the maintenance of bodily equilibrium, situated between the brain stem and the back of the cerebrum , and formed in humans of two lateral lobes and a median lobe.[accessedResource: BTO:0000232][accessDate: 04-11-2010]
NIFSTD:birnlex_1489
The portion of the brain located at the base of the skull that is responsible for balance, equilibrium and movement.
Cerebellar
The portion of the brain located at the base of the skull that is responsible for balance, equilibrium and movement.[accessedResource: NCIt:C12445][accessDate: 04-11-2010]
cerebellum
HuNS-1
HuNS1
James Malone
Ele Holloway
true
Use of spiked in controls in a measurement of the spiked in external/internal ratio
external control ratio
NCI-H1573
James Malone
Ele Holloway
PO:0004006
mesophyll cell
Tomasz Adamusiak
Cyclosporine
James Malone
A homodetic cyclic peptide that has formula C62H111N11O12.
InChI=1/C62H111N11O12/c1-25-27-28-40(15)52(75)51-56(79)65-43(26-2)58(81)67(18)33-48(74)68(19)44(29-34(3)4)55(78)66-49(38(11)12)61(84)69(20)45(30-35(5)6)54(77)63-41(16)53(76)64-42(17)57(80)70(21)46(31-36(7)8)59(82)71(22)47(32-37(9)10)60(83)72(23)50(39(13)14)62(85)73(51)24/h25,27,34-47,49-52,75H,26,28-33H2,1-24H3,(H,63,77)(H,64,76)(H,65,79)(H,66,78)/b27-25+/t40-,41+,42+,43-,44+,45-,46+,47+,49+,50-,51+,52-/m1/s1/f/h63-66H
30-ethyl-33-[(4E)-1-hydroxy-2-methylhex-4-en-1-yl]-1,4,7,10,12,15,19,25,28-nonamethyl-6,9,18,24-tetrakis(2-methylpropyl)-3,21-bis(propan-2-yl)-1,4,7,10,13,16,19,22,25,28,31-undecaazacyclotritriacontane-2,5,8,11,14,17,20,23,26,29,32-undecone
CHEBI:4031
A cyclic nonribosomal peptide of eleven amino acids; an immunosuppressant drug widely used in post-allogeneic organ transplant to reduce the activity of the patient's immune system, and therefore the risk of organ rejection.
cyclosporin A
Neoral
1,11-cyclo[L-alanyl-D-alanyl-N-methyl-L-leucyl-N-methyl-L-leucyl-N-methyl-L-valyl-(E)-(2S,3R,4R)-2-amino-3-hydroxy-N,4-dimethyloct-6-enoyl-L-2-aminobutanoyl-N-methylglycyl-N-methyl-L-leucyl-L-valyl-N-methyl-L-leucine]
(R-[R*,R*-(E)])-Cyclic(L-alanyl-D-alanyl-N-methyl-L-leucyl-N-methyl-L-leucyl-N-methyl-L-valyl-3-hydroxy-N,4-dimethyl-L-2-amino-6-octenoyl-L-alpha-aminobutyryl-N-methylglycyl-N-methyl-L-leucyl-L-valyl-N-methyl-L-leucyl)
ciclosporina
Gengraf
C62H111N11O12
30-ethyl-33-[(4E)-1-hydroxy-2-methylhex-4-en-1-yl]-6,9,18,24-tetraisobutyl-3,21-diisopropyl-1,4,7,10,12,15,19,25,28-nonamethyl-1,4,7,10,13,16,19,22,25,28,31-undecaazacyclotritriacontane-2,5,8,11,14,17,20,23,26,29,32-undecone
http://www.ebi.ac.uk/efo/EFO_0001506
ciclosporine
CC[C@H]1NC(=O)[C@H]([C@H](O)[C@H](C)C\\C=C\\C)N(C)C(=O)[C@@H](C(C)C)N(C)C(=O)[C@H](CC(C)C)N(C)C(=O)[C@H](CC(C)C)N(C)C(=O)[C@H](C)NC(=O)[C@H](C)NC(=O)[C@@H](CC(C)C)N(C)C(=O)[C@@H](NC(=O)[C@H](CC(C)C)N(C)C(=O)CN(C)C1=O)C(C)C
Sandimmune
Cyclo(L-alanyl-D-alanyl-N-methyl-L-leucyl-N-methyl-L-leucyl-N-methyl-L-valyl-((3R,4R,6E)-6,7-didehydro-3-hydroxy-N,4-dimethyl-L-2-aminooctanoyl)-L-2-aminobutanoyl-N-methylglycyl-N-methyl-L-leucyl-L-valyl-N-methylleucyl)
Ciclosporin
Antibiotic S 7481F1
ciclosporinum
InChIKey=PMATZTZNYRCHOR-MDVWSCMIDT
information content entity
An information entity is an entity that represents information about some other entity. For example, a measurement, a clustered data set.
information
James Malone
true
information entity
an information content entity is an entity that is generically dependent on some artifact and stands in relation of aboutness to some entity
http://www.ebi.ac.uk/efo/EFO_0001435
BC1
James Malone
BC-1
Ele Holloway
anti-inflammatory drugs
anti-inflammatory agent
http://www.ebi.ac.uk/efo/EFO_0001837
CHEBI:35472
A substance that reduces or suppresses inflammation.
anti-inflammatory drug
James Malone
hematological neoplasm
hematological cancer
blood cancer
lymphoid neoplasm
Tomasz Adamusiak
James Malone
GLI60
James Malone
GeneRIF:15793859
GeneRIF:15292938
GeneRIF:15655821
GeneRIF:11987129
GeneRIF:15946916
Other ulcerative colitis (disorder)
ULCERATVE COLITIS UNSPCF
GeneRIF:12725330
ICD9:556.9
UC - ulcerative colitis
Other ulcerative colitis
GeneRIF:15007304
Left-sided ulcerative colitis
Other ulcerative colitis (disorder)[accessedResource: DOID:8577][accessDate: 04-11-2010]
Inflammation of the COLON that is predominantly confined to the MUCOSA. Its major symptoms include DIARRHEA, rectal BLEEDING, the passage of MUCUS, and ABDOMINAL PAIN.[accessedResource: MSH:D003093][accessDate: 04-11-2010]
GeneRIF:11904678
GeneRIF:12112311
GeneRIF:12139949
MSH:D003093
Ulcerative colitis, unspecified[accessedResource: ICD9:556.9][accessDate: 04-11-2010]
GeneRIF:12133438
ulcerative colitis (disorder)[accessedResource: DOID:8577][accessDate: 04-11-2010]
ICD9:556
GeneRIF:12878361
GeneRIF:15188158
GeneRIF:12100519
GeneRIF:15550998
GeneRIF:11956656
GeneRIF:15288468
GeneRIF:12133437
GeneRIF:11953203
GeneRIF:12465728
GeneRIF:15944317
GeneRIF:14627676
GeneRIF:12572877
GeneRIF:12842452
GeneRIF:16149136
GeneRIF:16015687
GeneRIF:12730867
GeneRIF:12109441
GeneRIF:14597776
ulcerative colitis (disorder)
GeneRIF:14611908
GeneRIF:15628695
GeneRIF:15973119
GeneRIF:15685540
Left-sided ulcerative colitis[accessedResource: DOID:8577][accessDate: 04-11-2010]
Inflammation of the COLON that is predominantly confined to the MUCOSA. Its major symptoms include DIARRHEA, rectal BLEEDING, the passage of MUCUS, and ABDOMINAL PAIN.
GeneRIF:14731353
GeneRIF:12486609
GeneRIF:15905704
GeneRIF:12460892
GeneRIF:14617036
GeneRIF:15102868
James Malone
GeneRIF:15188166
GeneRIF:15046221
GeneRIF:12707342
GeneRIF:15052696
Other ulcerative colitis[accessedResource: DOID:8577][accessDate: 04-11-2010]
GeneRIF:12598727
UC - ulcerative colitis[accessedResource: DOID:8577][accessDate: 04-11-2010]
GeneRIF:11737306
Left-sided ulcerative (chronic) colitis[accessedResource: DOID:8577][accessDate: 04-11-2010]
GeneRIF:12011151
ULCERATVE COLITIS UNSPCF[accessedResource: ICD9:556.9][accessDate: 04-11-2010]
Ulcerative colitis, unspecified
GeneRIF:15146247
GeneRIF:11920497
GeneRIF:15248378
Left-sided ulcerative (chronic) colitis
ulcerative colitis
GeneRIF:15935984
GeneRIF:15284119
DOID:8577
GeneRIF:14525977
GeneRIF:12617879
GeneRIF:12512026
GeneRIF:15755919
GeneRIF:14669348
GeneRIF:16158332
MO_697
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#arrayer
http://www.ebi.ac.uk/efo/EFO_0002016
An arrayer is an instrument which deposits biological material onto a substrate in a defined pattern.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#arrayer[accessedResource: MO_697][accessDate: 04-11-2010]
arrayer
James Malone
SAEL:64
Lactiferous gland
glandula mammaria
Lobe of mammary gland
MAT:0000073
mamma
EMAPA:17759
glandula mammaria[accessedResource: BTO:0000817][accessDate: 04-11-2010]
MA:0000145
Lobe of breast
Lobular organ which consist of a lactiferous duct tree and the set of lactiferous acini that are connected to duct tree. Examples: There are variable numbers of lactiferous duct trees.
Lactiferous gland[accessedResource: FMAID:62088][accessDate: 04-11-2010]
The specialized accessory gland of the skin of female mammals that secretes milk. In the human female, it is a compound tubuloalveolar gland composed of 15 to 25 lobes arranged radially about the nipple and separated by connective and adipose tissue, each lobe having its own excretory (lactiferous) duct opening on the nipple. The lobes are subdivided into lobules, with the alveolar ducts and alveoli being the secretory portion of the gland.
EHDAA:6522
James Malone
FMAID:62088
BTO:0000817
EV:0100125
mamma[accessedResource: BTO:0000817][accessDate: 04-11-2010]
mammary gland
The specialized accessory gland of the skin of female mammals that secretes milk. In the human female, it is a compound tubuloalveolar gland composed of 15 to 25 lobes arranged radially about the nipple and separated by connective and adipose tissue, each lobe having its own excretory (lactiferous) duct opening on the nipple. The lobes are subdivided into lobules, with the alveolar ducts and alveoli being the secretory portion of the gland.[accessedResource: BTO:0000817][accessDate: 04-11-2010]
Pons Cerebelli
A broad mass of chiefly transverse nerve fibers conspicuous on the ventral surface of the brain of man and lower mammals at the anterior end of the medulla oblongata.
A broad mass of chiefly transverse nerve fibers conspicuous on the ventral surface of the brain of man and lower mammals at the anterior end of the medulla oblongata.[accessedResource: BTO:0001101][accessDate: 04-11-2010]
Pons Varolii[accessedResource: NCIt: C12511][accessDate: 04-11-2010]
The middle portion of the brainstem located between the midbrain and the medulla oblongata. The fourth ventricle lies dorsal to the pons which also contains the motor trigeminal nuclei and the abducens nuclei. The cerebellum contributes a large number of afferent fibers to the pons.[accessedResource: NCIt: C12511][accessDate: 04-11-2010]
NCIt: C12511
James Malone
Pons Cerebelli[accessedResource: NCIt: C12511][accessDate: 04-11-2010]
Pons Varolii
NIFSTD:birnlex_733
The middle portion of the brainstem located between the midbrain and the medulla oblongata. The fourth ventricle lies dorsal to the pons which also contains the motor trigeminal nuclei and the abducens nuclei. The cerebellum contributes a large number of afferent fibers to the pons.
BTO:0001101
Tomasz Adamusiak
pons
Cerebral Cortex[accessedResource: NCIt:C12443][accessDate: 10-05-2010]
cortex is ambiguous as class under brain so removed
brain cortex
Cortical
true
Cortex[accessedResource: NCIt:C12443][accessDate: 10-05-2010]
Cortical[accessedResource: NCIt:C12443][accessDate: 10-05-2010]
Cerebral Cortex
James Malone
Cortex
brain cortex[accessedResource: BTO:0000233][accessDate: 10-05-2010]
The surface layer of gray matter of the cerebrum that functions chiefly in coordination of sensory and motor information.[accessedResource: BTO:0000233][accessDate: 10-05-2010]
1.8
NCIt:C12443
BTO:0000233
The surface layer of gray matter of the cerebrum that functions chiefly in coordination of sensory and motor information.
NIFSTD:birnlex_1494
Tomasz Adamusiak
obsolete_cortex
birnlex_7072
Theiler stage 17
Tomasz Adamusiak
Jie Zheng
gastrula 80%-epiboly
Tomasz Adamusiak
Jie Zheng
O3
Ozon
ozone
CHEBI:25812
A triatomic oxygen that has formula O3.
ozono
trioxygene
[OO2]
http://www.ebi.ac.uk/efo/EFO_0002676
InChI=1/O3/c1-3-2
Trisauerstoff
[O-][O+]=O
InChIKey=CBENFWSGALASAD-UHFFFAOYAY
trioxygen
Nephroblastoma NOS[accessedResource: DOID:2154][accessDate: 04-11-2010]
A malignant mixed tumor that affects the kidneys and typically located_in children.
renal Wilms tumor
Tomasz Adamusiak
Nephroblastoma (disorder)
renal Wilms tumor[accessedResource: DOID:2154][accessDate: 04-11-2010]
nephroblastoma[accessedResource: DOID:2154][accessDate: 04-11-2010]
Nephroblastoma (morphologic abnormality)
A malignant mixed tumor that affects the kidneys and typically occurs in children.
Nephroblastoma (morphologic abnormality)[accessedResource: DOID:2154][accessDate: 04-11-2010]
DOID:2154
nephroblastoma
A malignant mixed tumor that affects the kidneys and typically located_in children.[accessedResource: DOID:2154][accessDate: 04-11-2010]
Nephroblastoma (disorder)[accessedResource: DOID:2154][accessDate: 04-11-2010]
Wilms tumor
Nephroblastoma NOS
Formerly class "current milliamperes"
The measure of movement of electrical charges in a conductor measured in milliamperes.
electrical current
James Malone
L3055
James Malone
GeneRIF:12816863
GeneRIF:11771735
James Malone
GeneRIF:12576745
GeneRIF:15804423
Down's syndrome - trisomy 21
GeneRIF:15068237
GeneRIF:12957488
GeneRIF:15068254
DOID:14250
GeneRIF:11824616
GeneRIF:12400059
Complete trisomy 21 syndrome (disorder)
GeneRIF:12796830
Complete trisomy 21 syndrome[accessedResource: SNOMEDCT:41040004][accessDate: 04-11-2010]
GeneRIF:15068242
GeneRIF:12393509
GeneRIF:11771751
Trisomy 21, Mitotic Nondisjunction
GeneRIF:15169762
GeneRIF:14678752
Trisomy 21[accessedResource: MSH:D004314][accessDate: 04-11-2010]
GeneRIF:12628594
GeneRIF:11565556
Down's syndrome NOS
G Trisomy
GeneRIF:12650976
GeneRIF:12943237
GeneRIF:15255950
GeneRIF:11856873
GeneRIF:16222229
ICD9:758.0
GeneRIF:12200143
GeneRIF:15184603
Trisomy 21
GeneRIF:14701734
GeneRIF:12032275
GeneRIF:14738882
GeneRIF:15820773
Mongolism
GeneRIF:11331941
GeneRIF:12172547
GeneRIF:15103709
GeneRIF:12586620
GeneRIF:15946822
GeneRIF:11771755
GeneRIF:12931206
GeneRIF:11771736
T21 - Trisomy 21
GeneRIF:11879646
GeneRIF:16231093
GeneRIF:14636651
GeneRIF:11771746
Down Syndrome, Partial Trisomy 21[accessedResource: MSH:D004314][accessDate: 04-11-2010]
Down's syndrome NOS (disorder)
G Trisomy[accessedResource: DOID:14250][accessDate: 04-11-2010]
Trisomy 21, Mitotic Nondisjunction[accessedResource: MSH:D004314][accessDate: 04-11-2010]
GeneRIF:15068241
Down's syndrome NOS[accessedResource: SNOMEDCT:254263008][accessDate: 04-11-2010]
GeneRIF:15068244
GeneRIF:12923861
GeneRIF:12895444
Mongolism[accessedResource: MSH:D004314][accessDate: 04-11-2010]
GeneRIF:12499044
GeneRIF:15661359
Complete trisomy 21 syndrome
SNOMEDCT:41040004
GeneRIF:16274669
GeneRIF:15068251
GeneRIF:15694837
Trisomy 21, Meiotic Nondisjunction
Tomasz Adamusiak
Trisomy 21 NOS
T21 - Trisomy 21[accessedResource: SNOMEDCT:41040004][accessDate: 04-11-2010]
GeneRIF:12070657
NIFSTD:nlx_dys_20090502
A disorder caused by the presence of all or part of an extra 21st chromosome, characterized by structural abnormalities throughout the body. Often Down syndrome is associated with some impairment of cognitive ability and physical growth as well as facial appearance. (Adapted from Wikipedia)
Trisomy 21, Meiotic Nondisjunction[accessedResource: MSH:D004314][accessDate: 04-11-2010]
GeneRIF:11920898
GeneRIF:12109594
GeneRIF:11771757
GeneRIF:15068245
GeneRIF:11771738
GeneRIF:14656875
GeneRIF:12080391
GeneRIF:12459318
GeneRIF:11771745
A chromosome disorder associated either with an extra chromosome 21 or an effective trisomy for chromosome 21. Clinical manifestations include hypotonia, short stature, brachycephaly, upslanting palpebral fissures, epicanthus, Brushfield spots on the iris, protruding tongue, small ears, short, broad hands, fifth finger clinodactyly, Simian crease, and moderate to severe MENTAL RETARDATION. Cardiac and gastrointestinal malformations, a marked increase in the incidence of LEUKEMIA, and the early onset of ALZHEIMER DISEASE are also associated with this condition. Pathologic features include the development of NEUROFIBRILLARY TANGLES in neurons and the deposition of AMYLOID BETA-PROTEIN, similar to the pathology of ALZHEIMER DISEASE. (Menkes, Textbook of Child Neurology, 5th ed, p213)[accessedResource: MSH:D004314][accessDate: 04-11-2010]
A chromosomal dysgenesis syndrome resulting from a triplication or translocation of chromosome 21. Down syndrome occurs in approximately 1:700 live births. Abnormalities are variable from individual to individual and may include mental retardation, retarded growth, flat hypoplastic face with short nose, prominent epicanthic skin folds, small low-set ears with prominent antihelix, fissured and thickened tongue, laxness of joint ligaments, pelvic dysplasia, broad hands and feet, stubby fingers, transverse palmar crease, lenticular opacities and heart disease. Patients with Down syndrome have an estimated 10 to 30-fold increased risk for leukemia; most have symptoms of Alzheimer's disease by age 40. Also known as trisomy 21 syndrome. --2004
GeneRIF:11771762
GeneRIF:15068243
Down's syndrome - trisomy 21[accessedResource: DOID:14250][accessDate: 04-11-2010]
GeneRIF:11771750
MSH:D004314
Trisomy 21 Syndrome[accessedResource: NCIt:C2993][accessDate: 04-11-2010]
GeneRIF:12771203
GeneRIF:11771764
Down's syndrome NOS (disorder)[accessedResource: SNOMEDCT:254263008][accessDate: 04-11-2010]
Complete trisomy 21 syndrome (disorder)[accessedResource: DOID:14250][accessDate: 04-11-2010]
GeneRIF:11810642
GeneRIF:12767918
trisomy 21 syndrome
GeneRIF:12359327
NCIt:C2993
Trisomy 21 NOS[accessedResource: SNOMEDCT:254263008][accessDate: 04-11-2010]
GeneRIF:14615042
GeneRIF:14512321
GeneRIF:11771749
GeneRIF:12529699
Down Syndrome, Partial Trisomy 21
GeneRIF:12145461
GeneRIF:12515899
DOWN'S SYNDROME
Down's syndrome[accessedResource: ICD9:758.0][accessDate: 04-11-2010]
Trisomy 21 (Down Syndrome)Downs SyndromeTrisomy 21 Syndrome[accessedResource: NCIt:C2993][accessDate: 04-11-2010]
A disorder caused by the presence of all or part of an extra 21st chromosome, characterized by structural abnormalities throughout the body. Often Down syndrome is associated with some impairment of cognitive ability and physical growth as well as facial appearance. (Adapted from Wikipedia)[accessedResource: NIFSTD:nlx_dys_20090502][accessDate: 04-11-2010]
GeneRIF:15082224
SNOMEDCT:254263008
GeneRIF:15358155
GeneRIF:11771758
GeneRIF:12469345
A chromosomal dysgenesis syndrome resulting from a triplication or translocation of chromosome 21. Down syndrome occurs in approximately 1:700 live births. Abnormalities are variable from individual to individual and may include mental retardation, retarded growth, flat hypoplastic face with short nose, prominent epicanthic skin folds, small low-set ears with prominent antihelix, fissured and thickened tongue, laxness of joint ligaments, pelvic dysplasia, broad hands and feet, stubby fingers, transverse palmar crease, lenticular opacities and heart disease. Patients with Down syndrome have an estimated 10 to 30-fold increased risk for leukemia; most have symptoms of Alzheimer's disease by age 40. Also known as trisomy 21 syndrome. --2004[accessedResource: NCIt:C2993][accessDate: 04-11-2010]
GeneRIF:15068239
Down syndrome
A chromosome disorder associated either with an extra chromosome 21 or an effective trisomy for chromosome 21. Clinical manifestations include hypotonia, short stature, brachycephaly, upslanting palpebral fissures, epicanthus, Brushfield spots on the iris, protruding tongue, small ears, short, broad hands, fifth finger clinodactyly, Simian crease, and moderate to severe MENTAL RETARDATION. Cardiac and gastrointestinal malformations, a marked increase in the incidence of LEUKEMIA, and the early onset of ALZHEIMER DISEASE are also associated with this condition. Pathologic features include the development of NEUROFIBRILLARY TANGLES in neurons and the deposition of AMYLOID BETA-PROTEIN, similar to the pathology of ALZHEIMER DISEASE. (Menkes, Textbook of Child Neurology, 5th ed, p213)
Trisomy 21 (Down Syndrome)Downs SyndromeTrisomy 21 Syndrome
Made obsolete: considered as synonym to invasive lobular carcinoma
true
obsolete_infiltrating lobular carcinoma
AN3CA
James Malone
Ele Holloway
mouse cell line
ovalbumin
2.7.1
true
MCC:0000356
NCI-H460
obsolete_NCIH460
Tomasz Adamusiak
duplicate of EFO_0003044
http://jaxmice.jax.org/strain/009287.html
ILSXISS100/TejJ
Tomasz Adamusiak
Muscular Dystrophy, Emery-Dreifuss Type[accessedResource: MSH:D020389][accessDate: 04-11-2010]
GeneRIF:12467752
DOID:11726
Muscular Dystrophy, Emery-Dreifuss, Autosomal Dominant[accessedResource: MSH:D020389][accessDate: 04-11-2010]
Emery-Dreifuss Type Muscular Dystrophy
EMD - Emery-Dreifuss muscular dystrophy[accessedResource: SNOMEDCT:111508004][accessDate: 04-11-2010]
X-Linked Scapuloperoneal Syndrome
Emery-Dreifuss Syndrome[accessedResource: MSH:D020389][accessDate: 04-11-2010]
Scapuloperoneal muscular dystrophy (disorder)[accessedResource: SNOMEDCT:129620000][accessDate: 04-11-2010]
Benign scapuloperoneal muscular dystrophy with early contractures
Autosomal Dominant Emery Dreifuss Muscular Dystrophy
Muscular Dystrophy, Emery-Dreifuss, Autosomal Recessive
Scapuloperoneal Syndrome, X Linked[accessedResource: MSH:D020389][accessDate: 04-11-2010]
Hauptmann Thannhauser Muscular Dystrophy
Emery-Dreifuss muscular dystrophy (disorder)[accessedResource: DOID:11726][accessDate: 04-11-2010]
Scapuloperoneal Muscular Dystrophy[accessedResource: MSH:D020389][accessDate: 04-11-2010]
Hauptmann-Thannhauser Muscular Dystrophy[accessedResource: MSH:D020389][accessDate: 04-11-2010]
A heterogenous group of inherited muscular dystrophy without the involvement of nervous system. The disease is characterized by MUSCULAR ATROPHY; MUSCLE WEAKNESS; CONTRACTURE of the elbows; ACHILLES TENDON; and posterior cervical muscles; with or without cardiac features. There are several INHERITANCE PATTERNS including X-linked (X CHROMOSOME), autosomal dominant, and autosomal recessive gene mutations.
Autosomal Recessive Emery Dreifuss Muscular Dystrophy[accessedResource: MSH:D020389][accessDate: 04-11-2010]
X Linked Emery Dreifuss Muscular Dystrophy
Scapuloperoneal muscular dystrophy (disorder)
SNOMEDCT:129620000
Emery Dreifuss Muscular Dystrophy 2
GeneRIF:12755701
Emery-Dreifuss muscular dystrophy
James Malone
SNOMEDCT:111508004
A heterogenous group of inherited muscular dystrophy without the involvement of nervous system. The disease is characterized by MUSCULAR ATROPHY; MUSCLE WEAKNESS; CONTRACTURE of the elbows; ACHILLES TENDON; and posterior cervical muscles; with or without cardiac features. There are several INHERITANCE PATTERNS including X-linked (X CHROMOSOME), autosomal dominant, and autosomal recessive gene mutations.[accessedResource: MSH:D020389][accessDate: 04-11-2010]
EMD - Emery-Dreifuss muscular dystrophy
Scapuloperoneal Muscular Dystrophy
GeneRIF:12684533
Muscular Dystrophy, Emery-Dreifuss, X-Linked[accessedResource: MSH:D020389][accessDate: 04-11-2010]
Scapuloilioperoneal Atrophy with Cardiopathy
MSH:D020389
Emery-Dreifuss Syndrome
Emery-Dreifuss Muscular Dystrophy 2[accessedResource: MSH:D020389][accessDate: 04-11-2010]
Benign scapuloperoneal muscular dystrophy with early contractures[accessedResource: SNOMEDCT:111508004][accessDate: 04-11-2010]
Scapuloilioperoneal Atrophy with Cardiopathy[accessedResource: MSH:D020389][accessDate: 04-11-2010]
GeneRIF:15009215
GeneRIF:11973618
Emery-Dreifuss muscular dystrophy (disorder)
interferon alpha 2a
Tomasz Adamusiak
James Malone
Whipple Disease
Whipple's disease
WHIPPLE DIS
WHIPPLES DIS
Whipple's disease (disorder)[accessedResource: SNOMEDCT:41545003][accessDate: 04-11-2010]
WD - Whipple's disease
ICD9:040.2
Whipples Disease
DOID:8476
Intestinal lipodystrophy
Intestinal Lipodystrophy[accessedResource: MSH:D008061][accessDate: 04-11-2010]
Whipples Disease[accessedResource: MSH:D008061][accessDate: 04-11-2010]
Intestinal Whipple's disease[accessedResource: SNOMEDCT:41545003][accessDate: 04-11-2010]
WHIPPLE DIS[accessedResource: MSH:D008061][accessDate: 04-11-2010]
WHIPPLES DIS[accessedResource: MSH:D008061][accessDate: 04-11-2010]
A chronic systemic infection by a gram-positive bacterium, Tropheryma whippelii, mainly affecting the SMALL INTESTINE but also the JOINTS; CARDIOVASCULAR SYSTEM; and the CENTRAL NERVOUS SYSTEM. The disease is characterized by fat deposits in the INTESTINAL MUCOSA and LYMPH NODES, malabsorption, DIARRHEA with fatty stools, MALNUTRITION, and ARTHRITIS.
MSH:D008061
A chronic systemic infection by a gram-positive bacterium, Tropheryma whippelii, mainly affecting the SMALL INTESTINE but also the JOINTS; CARDIOVASCULAR SYSTEM; and the CENTRAL NERVOUS SYSTEM. The disease is characterized by fat deposits in the INTESTINAL MUCOSA and LYMPH NODES, malabsorption, DIARRHEA with fatty stools, MALNUTRITION, and ARTHRITIS.[accessedResource: MSH:D008061][accessDate: 04-11-2010]
SNOMEDCT:41545003
Intestinal Whipple's disease
WD - Whipple's disease[accessedResource: SNOMEDCT:41545003][accessDate: 04-11-2010]
Whipple disease[accessedResource: DOID:8476][accessDate: 04-11-2010]
Whipple's disease (disorder)
Fc1c[nH]c(=O)[nH]c1=O
5-fluorouracil
http://www.ebi.ac.uk/efo/EFO_0001474
InChIKey=GHASVSINZRGABV-ZDKSUBDRCT
C4H3FN2O2
Ele Holloway
5-FU
CHEBI:46345
5-fluoropyrimidine-2,4(1H,3H)-dione
An organofluorine compound that has formula C4H3FN2O2.
Fluorouracil
James Malone
5-Fluoropyrimidine-2,4-dione
http://www.ebi.ac.uk/efo/EFO_0002488
InChI=1/C4H3FN2O2/c5-2-1-6-4(9)7-3(2)8/h1H,(H2,6,7,8,9)/f/h6-7H
A myocyte located in the heart. The contractile fiber resembles those of skeletal muscle but are only one third as large in diameter, are richer in sarcoplasm, and contain centrally located instead of peripheral nuclei.
CL:0000193
heart muscle cell[accessedResource: CL:0000193][accessDate: 04-11-2010]
NIFSTD:sao658938043
cardiac muscle cell (sensu Arthopoda)[accessedResource: CL:0000193][accessDate: 04-11-2010]
cardiac muscle cell
A striated muscle cell found in the heart. They develop from cardiac myoblasts.
A myocyte located in the heart. The contractile fiber resembles those of skeletal muscle but are only one third as large in diameter, are richer in sarcoplasm, and contain centrally located instead of peripheral nuclei.[accessedResource: CL:0000746][accessDate: 04-11-2010]
cardiocyte[accessedResource: CL:0000193][accessDate: 04-11-2010]
A striated muscle cell found in the heart. They develop from cardiac myoblasts.[accessedResource: CL:0000193][accessDate: 04-11-2010]
cardiocyte
cardiomyocyte[accessedResource: BTO:0001539][accessDate: 04-11-2010]
A heart muscle cell.[accessedResource: BTO:0001539][accessDate: 04-11-2010]
heart muscle cell
A heart muscle cell.
Striated muscle cells found in the heart. They are derived from cardiac myoblasts (myoblasts, cardiac (MSH).
Striated muscle cells found in the heart. They are derived from cardiac myoblasts (myoblasts, cardiac (MSH).[accessedResource: NIFSTD:sao658938043][accessDate: 04-11-2010]
Tomasz Adamusiak
Cardiac Muscle Cell[accessedResource: NIFSTD:sao658938043][accessDate: 04-11-2010]
cardiomyocyte
cardiac muscle cell (sensu Arthopoda)
CL:0000746
James Malone
BTO:0001539
cardiac myocyte
NCI Metathesaurus: C0038404
Enterococcus faecalis infection
James Malone
ZFS:0000004
cleavage 8-cell
James Malone
ZFA:0000311
Is a mandibular muscle that consists of three subdivisions A1, A2, and A3. All three originate on the hyomandibula and suspensorium but each has a distinct insertion. A1 inserts on the maxilla, A2 inserts along the caudal margin of the articular and A3 inserts on the medial surface of the articular.
Is a mandibular muscle that consists of three subdivisions A1, A2, and A3. All three originate on the hyomandibula and suspensorium but each has a distinct insertion. A1 inserts on the maxilla, A2 inserts along the caudal margin of the articular and A3 inserts on the medial surface of the articular.[accessedResource: ZFA:0000311][accessDate: 04-11-2010]
adductor mandibulae complex
James Malone
1.8
true
obsolete_T-cell lymphoblastic lymphoma
James Malone
duplicate of T-cell lymphoblastic lymphoma EFO_0000209
Brown adipose cell[accessedResource: CL:0000449][accessDate: 04-11-2010]
A cell from the thermogenic form of adipose tissue found in newborns of many species, including humans, and in hibernating mammals. Brown fat is capable of rapid liberation of energy and seems to be important in the maintenance of body temperature immediately after birth and upon waking from hibernation.[accessedResource: CL:0000449][accessDate: 04-11-2010]
Brown adipose cell
James Malone
Brown adipocyte
CL:0000449
brown fat cell
Brown adipocyte[accessedResource: CL:0000449][accessDate: 04-11-2010]
A cell from the thermogenic form of adipose tissue found in newborns of many species, including humans, and in hibernating mammals. Brown fat is capable of rapid liberation of energy and seems to be important in the maintenance of body temperature immediately after birth and upon waking from hibernation.
Preadipocyte cell line.
3T3-F442A cell
F442A
Preadipocyte cell line.[accessedResource: BTO:0001169][accessDate: 04-11-2010]
BTO:0001169
3T3-F442A
James Malone
Ele Holloway
3T3-F442A cell[accessedResource: BTO:0001169][accessDate: 04-11-2010]
true
umol/kg
micromole per kilogram
James Malone
UBERON:0002302
atrial myocardium
Tomasz Adamusiak
http://jaxmice.jax.org/strain/009263.html
ILSXISS19/TejJ
Tomasz Adamusiak
ZFA:0000208
FMAID:7202
MFO:0003020
EHDAA:8062
gall bladder
Gallbladder[accessedResource: FMAID:7202][accessDate: 04-11-2010]
TAO:0000208
Organ with organ cavity which is continuous proximally with the cystic duct and distally terminates in the fundus of the gallbladder. Examples: There is only one gallbladder.
SAEL:44
MAT:0000072
MA:000356
Gallbladder
BTO:0000493
EV:0100090
James Malone
A small, pear-shaped muscular sac, located under the right lobe of the liver, in which bile secreted by the liver is stored until needed by the body for digestion.[accessedResource: BTO:0000493][accessDate: 04-11-2010]
A small, pear-shaped muscular sac, located under the right lobe of the liver, in which bile secreted by the liver is stored until needed by the body for digestion.
EMAPA:17202
XAO:0000135
antihistaminics
histamine receptor blocker
antihistamine
antihistaminico
http://www.ebi.ac.uk/efo/EFO_0001865
James Malone
CHEBI:37956
histamine antagonist
antihistamines
histamine receptor blockers
Histamine antagonists are the drugs that bind to but do not activate histamine receptors, thereby blocking the actions of histamine or histamine agonists.
Redundant
true
A clincal factors is a biomaterial factor that concerns the observation, treatment or measurement of disease within subjects.
obsolete_clinical factor
James Malone
ZFA:0000279
XAO:0000057
presomitic mesoderm
PSM
segmental plate[accessedResource: TAO:0000279][accessDate: 04-11-2010]
James Malone
PSM[accessedResource: ZFA:0000279][accessDate: 04-11-2010]
Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form.
TAO:0000279
Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.[accessedResource: TAO:0000279][accessDate: 04-11-2010]
Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.
segmental plate
Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form.[accessedResource: ZFA:0000279][accessDate: 04-11-2010]
Lobular organ the parenchyma of which consists of glandular acini which communicate via a duct system with the duodenum. Examples: There is only one pancreas.
EMAPA:18816
pancreas
MA:0001582
EHDAA:6893
A large lobulated gland of vertebrates that secretes digestive enzymes and the hormones insulin and glucagon.[accessedResource: BTO:0000988][accessDate: 04-11-2010]
BTO:0000988
EV:0100092
MA:0002415
SAEL:80
James Malone
TAO:0000140
MAT:0000075
A large lobulated gland of vertebrates that secretes digestive enzymes and the hormones insulin and glucagon.
ZFA:0000140
XAO:0000136
FMAID:7198
stomach endoderm
Tomasz Adamusiak
Jie Zheng
4T1
James Malone
Ele Holloway
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Unit_per_Kilogram
U/kg
unit per kilogram
http://www.arabidopsis.org/servlets/TairObject?id=1005158900&type=germplasm
CS57876 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158900&type=germplasm
CS57876
James Malone
HCC78
Autoimmune disease, not elsewhere classified
[X]Disorder involving the immune mechanism, unspecified (disorder)
Immunodeficiency and Immunosuppression Disorders[accessedResource: NCIt:C27351][accessDate: 04-11-2010]
NCIt:C27351
Deficiency of cell-mediated immunity
Other specified disorders of the immune mechanism (disorder)[accessedResource: SNOMEDCT:191017001][accessDate: 04-11-2010]
[X]Disorder involving the immune mechanism, unspecified (disorder)[accessedResource: SNOMEDCT:191035005][accessDate: 04-11-2010]
Disorders involving the immune mechanism[accessedResource: ICD9:279][accessDate: 04-11-2010]
AUTOIMMUNE DISEASE NEC[accessedResource: ICD9:279.4][accessDate: 04-11-2010]
ICD9:279.1
ICD9:279.4
Other specified disorders involving the immune mechanism
ICD9:279.9
ICD9:279.19
Other specified disorders of the immune mechanism (disorder)
Other deficiency of cell-mediated immunity[accessedResource: ICD9:279.19][accessDate: 04-11-2010]
DEFIC CELL IMMUNITY NOS
Other deficiency of cell-mediated immunity
[X]Disorder involving the immune mechanism, unspecified[accessedResource: SNOMEDCT:191035005][accessDate: 04-11-2010]
Immunodeficiency and Immunosuppression Disorders
Other specified disorders of the immune mechanism
A group of non-neoplastic and neoplastic disorders resulting from the deregulation and/or deficiency of immune system functions. It includes autoimmune disorders (e.g., lupus erythematosus, dermatomyositis, rheumatoid arthritis), congenital and acquired immunodeficiency syndromes including the acquired immune deficiency syndrome (AIDS), and neoplasms (e.g., lymphomas and malignancies secondary to transplantation.)[accessedResource: NCIt:C27351][accessDate: 04-11-2010]
SNOMEDCT:191019003
ICD9:279
IMMUNE MECHANISM DIS NOS[accessedResource: ICD9:279.9][accessDate: 04-11-2010]
Autoimmune disease, not elsewhere classified[accessedResource: ICD9:279.4][accessDate: 04-11-2010]
Immune System and Related Disorders
AUTOIMMUNE DISEASE NEC
IMMUNDEF T-CELL DEF NOS
James Malone
Unspecified disorder of immune mechanism[accessedResource: ICD9:279.9][accessDate: 04-11-2010]
IMMUNE MECHANISM DIS NEC[accessedResource: ICD9:279.8][accessDate: 04-11-2010]
IMMUNE MECHANISM DIS NEC
DEFIC CELL IMMUNITY NOS[accessedResource: ICD9:279.19][accessDate: 04-11-2010]
SNOMEDCT:191035005
Other specified disorders of the immune mechanism[accessedResource: SNOMEDCT:191017001][accessDate: 04-11-2010]
ICD9:279.10
Disorders involving the immune mechanism
Disorder of the immune mechanism NOS[accessedResource: SNOMEDCT:191019003][accessDate: 04-11-2010]
Immune System and Related Disorders[accessedResource: NCIt:C27351][accessDate: 04-11-2010]
ICD9:279.8
Immunodeficiency with predominant T-cell defect, unspecified
Other specified disorders involving the immune mechanism[accessedResource: ICD9:279.8][accessDate: 04-11-2010]
Disorder of the immune mechanism NOS (disorder)
Immunodeficiency with predominant T-cell defect, unspecified[accessedResource: ICD9:279.10][accessDate: 04-11-2010]
Disorder of the immune mechanism NOS (disorder)[accessedResource: SNOMEDCT:191019003][accessDate: 04-11-2010]
IMMUNE MECHANISM DIS NOS
immune system disease
Deficiency of cell-mediated immunity[accessedResource: ICD9:279.1][accessDate: 04-11-2010]
SNOMEDCT:191017001
IMMUNDEF T-CELL DEF NOS[accessedResource: ICD9:279.10][accessDate: 04-11-2010]
A group of non-neoplastic and neoplastic disorders resulting from the deregulation and/or deficiency of immune system functions. It includes autoimmune disorders (e.g., lupus erythematosus, dermatomyositis, rheumatoid arthritis), congenital and acquired immunodeficiency syndromes including the acquired immune deficiency syndrome (AIDS), and neoplasms (e.g., lymphomas and malignancies secondary to transplantation.)
DOID:2914
Unspecified disorder of immune mechanism
[X]Disorder involving the immune mechanism, unspecified
Disorder of the immune mechanism NOS
MAT:0000003
plant component
James Malone
muscular disease
Myopathy is a peripheral nervous system disease consisting of any abnormal condition or disease of the muscular tissues; commonly designates a disorder involving skeletal muscle.[accessedResource: DOID:423][accessDate: 04-11-2010]
Myopathy is a peripheral nervous system disease consisting of any abnormal condition or disease of the muscular tissues; commonly designates a disorder involving skeletal muscle.
myopathy
DOID:423
Tomasz Adamusiak
myopathy[accessedResource: DOID:423][accessDate: 04-11-2010]
James Malone
A mix of specimens from multiple individuals.
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pool[accessedResource: MO_779][accessDate: 04-11-2010]
Jie Zheng
MO_779
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pool
pool
period of infection
James Malone
PancTu-I
PancTUI
James Malone
Ele Holloway
GeneRIF:12881718
[M]Gliomas[accessedResource: SNOMEDCT:189908003][accessDate: 10-05-2010]
GeneRIF:15948146
1.5
GeneRIF:15015772
GeneRIF:12231538
GeneRIF:15973152
[M]Glioma NOS
true
Glioma, NOS (except Nasal glioma, not neoplastic)[accessedResource: SNOMEDCT:74532006][accessDate: 10-05-2010]
GeneRIF:15273738
Tumor of the Neuroglia
GeneRIF:15201971
glial tumors[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
Neuroglial tumor[accessedResource: DOID:2627][accessDate: 10-05-2010]
GeneRIF:15469737
GeneRIF:12810672
GeneRIF:12198774
GeneRIF:12907597
GeneRIF:15088070
GeneRIF:11809417
Glioma, Mixed
GeneRIF:12545160
GeneRIF:15332324
Glial Tumor[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:15774464
Glioma, malignant (morphologic abnormality)
A benign or malignant brain and spinal cord tumor that arises from glial cells (astrocytes, oligodendrocytes, ependymal cells). Tumors that arise from astrocytes are called astrocytic tumors or astrocytomas. Tumors that arise from oligodendrocytes are called oligodendroglial tumors. Tumors that arise from ependymal cells are called ependymomas. -- 2004
SNOMEDCT:189926000
GeneRIF:12850541
GeneRIF:14530312
A benign or malignant brain and spinal cord tumor that arises from glial cells (astrocytes, oligodendrocytes, ependymal cells). Tumors that arise from astrocytes are called astrocytic tumors or astrocytomas. Tumors that arise from oligodendrocytes are called oligodendroglial tumors. Tumors that arise from ependymal cells are called ependymomas.
GeneRIF:16389900
GeneRIF:16033775
GeneRIF:11716067
GeneRIF:12388547
GeneRIF:15160992
Glial Tumor
GeneRIF:16215635
Mixed Gliomas[accessedResource: MSH:D005910][accessDate: 10-05-2010]
GeneRIF:15509526
GeneRIF:15657358
GeneRIF:11949822
Gliomas (morphologic abnormality)
GeneRIF:15958622
GeneRIF:15072448
GeneRIF:12130632
GeneRIF:15056287
GeneRIF:15580296
GeneRIF:11705870
[M]Gliomas (morphologic abnormality)[accessedResource: SNOMEDCT:189908003][accessDate: 10-05-2010]
Glioma, malignant (morphologic abnormality)[accessedResource: SNOMEDCT:74532006][accessDate: 10-05-2010]
Neoplasm of Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
Gliomas, Malignant
GeneRIF:12843260
GeneRIF:11859970
GeneRIF:12684632
GeneRIF:14997014
GeneRIF:11930164
glioma[accessedResource: DOID:2627][accessDate: 10-05-2010]
GeneRIF:12735302
GeneRIF:12962281
GeneRIF:16098466
DOID:2627
GeneRIF:12496285
Gliomas (morphologic abnormality)[accessedResource: DOID:2627][accessDate: 10-05-2010]
GeneRIF:12764090
Glioma (except Nasal glioma, not neoplastic)[accessedResource: SNOMEDCT:74532006][accessDate: 10-05-2010]
GeneRIF:15557754
GeneRIF:14597411
GeneRIF:12576462
Malignant Glioma[accessedResource: MSH:D005910][accessDate: 10-05-2010]
GeneRIF:15737330
GeneRIF:12509854
GeneRIF:15383564
GeneRIF:15254085
MSH:D005910
GeneRIF:16084492
GeneRIF:12125964
Glial Cell Tumors[accessedResource: MSH:D005910][accessDate: 10-05-2010]
GeneRIF:16049340
Gliomas
Glioma (except Nasal glioma, not neoplastic)
GeneRIF:15882793
GeneRIF:11836615
GeneRIF:12821932
GeneRIF:15047712
SNOMEDCT:189908003
GeneRIF:15256062
GeneRIF:15184909
GeneRIF:15816541
[M]Gliomas (morphologic abnormality)
GeneRIF:12133571
A benign or malignant brain and spinal cord tumor that arises from glial cells (astrocytes, oligodendrocytes, ependymal cells). Tumors that arise from astrocytes are called astrocytic tumors or astrocytomas. Tumors that arise from oligodendrocytes are called oligodendroglial tumors. Tumors that arise from ependymal cells are called ependymomas.[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
Glioma, NOS (except Nasal glioma, not neoplastic)
Glial Neoplasm
[M]Glioma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189926000][accessDate: 10-05-2010]
GeneRIF:16264179
Tumor, Glial Cell[accessedResource: MSH:D005910][accessDate: 10-05-2010]
GeneRIF:16304992
Neuroglial Tumor
Tumor of Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:15269346
glioma NOS (morphologic abnormality)[accessedResource: DOID:2627][accessDate: 10-05-2010]
Neoplasm of the Neuroglia
GeneRIF:15126357
SNOMEDCT:115240006
Glial Neoplasm[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:15809742
GeneRIF:15527101
GeneRIF:12738994
GeneRIF:15989758
Malignant glioma
Neoplasm of the Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:11844831
GeneRIF:15812817
GeneRIF:11920587
Neuroglial Neoplasms
Tumors, Glial Cell
Tumors of Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:15469871
GeneRIF:15123617
Neuroglial Neoplasms[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
Benign and malignant central nervous system neoplasms derived from glial cells (i.e., astrocytes, oligodendrocytes, and ependymocytes). Astrocytes may give rise to astrocytomas (ASTROCYTOMA) or glioblastoma multiforme (see GLIOBLASTOMA). Oligodendrocytes give rise to oligodendrogliomas (OLIGODENDROGLIOMA) and ependymocytes may undergo transformation to become EPENDYMOMA; CHOROID PLEXUS NEOPLASMS; or colloid cysts of the third ventricle. (From Escourolle et al., Manual of Basic Neuropathology, 2nd ed, p21)
GeneRIF:15893739
GeneRIF:15198128
GeneRIF:15580288
GeneRIF:14504888
GeneRIF:14719118
GeneRIF:15814461
Neoplasm of Neuroglia
GeneRIF:15218947
GeneRIF:15870690
Gliomas[accessedResource: MSH:D005910][accessDate: 10-05-2010]
GeneRIF:14705150
GeneRIF:15684595
GeneRIF:12629150
GeneRIF:14991747
GeneRIF:13130092
GeneRIF:15015771
GeneRIF:15696967
GeneRIF:15361550
SNOMEDCT:74532006
GeneRIF:12084351
GeneRIF:15547763
GeneRIF:15671555
Neoplasms of Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:12507885
GeneRIF:12518988
GeneRIF:11716069
glial tumors
GeneRIF:12843258
GeneRIF:12963026
GeneRIF:15867349
GeneRIF:14603470
Glioma
GeneRIF:11716065
GeneRIF:12651906
GeneRIF:12507886
[M]Glioma NOS[accessedResource: SNOMEDCT:189926000][accessDate: 10-05-2010]
[M]Glioma NOS (morphologic abnormality)
GeneRIF:11948808
Glioma NOS
James Malone
GeneRIF:12778072
GeneRIF:12932816
Tumors of Neuroglia
GeneRIF:16033774
GeneRIF:14633698
Neoplasms of Neuroglia
GeneRIF:9109541
GeneRIF:12957651
GeneRIF:12651623
Tumor of Neuroglia
Neuroglial Neoplasm[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:15161654
GeneRIF:12698196
GeneRIF:15138575
Glioma, Mixed[accessedResource: MSH:D005910][accessDate: 10-05-2010]
GeneRIF:15201989
GeneRIF:12783249
[M]Gliomas
GeneRIF:15589840
GeneRIF:15592495
GeneRIF:15696973
glioma NOS[accessedResource: DOID:2627][accessDate: 10-05-2010]
GeneRIF:11856869
GeneRIF:12856717
Gliomas, Mixed
Glial Cell Tumor
GeneRIF:12118245
GeneRIF:14676120
GeneRIF:15193433
GeneRIF:15788675
Glioma (morphologic abnormality)[accessedResource: SNOMEDCT:115240006][accessDate: 10-05-2010]
GeneRIF:16027728
Glioma NOS (morphologic abnormality)
GeneRIF:13130506
GeneRIF:15094455
Tumor of the Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:15743799
glioma (morphologic abnormality)
GeneRIF:12600989
GeneRIF:15791479
Replaced with central nervous system cancer (EFO_0000326)
obsolete_glioma
GeneRIF:12609716
GeneRIF:16092940
GeneRIF:15041728
GeneRIF:12061725
GeneRIF:14558597
GeneRIF:12799382
GeneRIF:15915502
GeneRIF:11913980
NCIt:C3059
GeneRIF:15867356
Neuroglial Neoplasm
GeneRIF:15334059
GeneRIF:12730958
GeneRIF:15531913
Gliomas, Malignant[accessedResource: MSH:D005910][accessDate: 10-05-2010]
Glioma, malignant, no ICD-O subtype
GeneRIF:12883693
GeneRIF:15178645
GeneRIF:15451022
GeneRIF:12388552
GeneRIF:15469933
Glioma, malignant, no ICD-O subtype[accessedResource: SNOMEDCT:74532006][accessDate: 10-05-2010]
Benign and malignant central nervous system neoplasms derived from glial cells (i.e., astrocytes, oligodendrocytes, and ependymocytes). Astrocytes may give rise to astrocytomas (ASTROCYTOMA) or glioblastoma multiforme (see GLIOBLASTOMA). Oligodendrocytes give rise to oligodendrogliomas (OLIGODENDROGLIOMA) and ependymocytes may undergo transformation to become EPENDYMOMA; CHOROID PLEXUS NEOPLASMS; or colloid cysts of the third ventricle. (From Escourolle et al., Manual of Basic Neuropathology, 2nd ed, p21)[accessedResource: MSH:D005910][accessDate: 10-05-2010]
SUDHL5
James Malone
Ele Holloway
Dementia in Pick's disease (disorder)
NCIt:C85008
DOID:11870
Pick disease
Tomasz Adamusiak
Pick's disease (disorder)
Pick's disease
A rare neurodegenerative disorder leading to dementia. It is characterized by frontotemporal lobar degeneration with accumulation of tau proteins which form Pick bodies.[accessedResource: NCIt:C85008][accessDate: 04-11-2010]
Pick's Disease[accessedResource: NCIt:C85008][accessDate: 04-11-2010]
A rare neurodegenerative disorder leading to dementia. It is characterized by frontotemporal lobar degeneration with accumulation of tau proteins which form Pick bodies.
frontotemporal lobar degeneration
Pick's disease (disorder)[accessedResource: DOID:11870][accessDate: 04-11-2010]
Dementia in Pick's disease (disorder)[accessedResource: DOID:11870][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mol
Tomasz Adamusiak
A mole is a substance unit which is equal to the amount of substance of a molecular system which contains as many elementary entities as there are atoms in 0.012 kilogram of carbon 12.
mole
Jie Zheng
mol
true
http://www.ebi.ac.uk/efo/EFO_0001690
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mol[accessedResource: MO_998][accessDate: 04-11-2010]
MO_998
A substance unit which is equal to the amount of substance of a molecular system which contains as many elementary entities as there are atoms in 0.012 kilogram of carbon 12.
http://jaxmice.jax.org/strain/009293.html
ILSXISS115/TejJ
Tomasz Adamusiak
GeneRIF:14562119
GeneRIF:15607368
GeneRIF:15674343
GeneRIF:15749074
GeneRIF:15203865
GeneRIF:12760263
AML - acute Myeloid Leukemia
Acute Myelocytic Leukemias[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:11986950
GeneRIF:15659725
GeneRIF:12112533
acute non-lymphocytic leukaemia
GeneRIF:12969963
GeneRIF:15621793
GeneRIF:12096348
GeneRIF:16107886
Myeloblastic Leukemia, Acute
Acute Myeloid Leukemia with Maturation
GeneRIF:14737076
GeneRIF:15208643
GeneRIF:12481903
GeneRIF:12699896
GeneRIF:12393447
GeneRIF:12921955
GeneRIF:12427969
GeneRIF:15297415
GeneRIF:11823047
GeneRIF:12393285
Acute Nonlymphoblastic Leukemias[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:16105979
GeneRIF:12931227
GeneRIF:14662338
GeneRIF:15575056
GeneRIF:14615365
GeneRIF:11986944
GeneRIF:15385933
GeneRIF:11964319
GeneRIF:12209593
GeneRIF:12163055
GeneRIF:12496475
acute myeloid leukaemia - category
GeneRIF:12091906
Acute Myeloid Leukemia without Maturation
GeneRIF:16094422
GeneRIF:15840695
AML - acute Myeloid Leukemia[accessedResource: DOID:9119][accessDate: 04-11-2010]
GeneRIF:15855281
Tomasz Adamusiak
GeneRIF:15978940
Acute Myelogenous Leukemia[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:12554803
GeneRIF:11782354
GeneRIF:12935959
GeneRIF:14977832
GeneRIF:15735013
GeneRIF:12351377
Clonal expansion of myeloid blasts in bone marrow, blood, and other tissue. Myeloid leukemias develop from changes in cells that normally produce NEUTROPHILS; BASOPHILS; EOSINOPHILS; and MONOCYTES.
GeneRIF:12529664
GeneRIF:15985538
GeneRIF:12031912
GeneRIF:15103390
acute myeloblastic leukemia (disorder)[accessedResource: DOID:9119][accessDate: 04-11-2010]
acute myeloid leukaemia
GeneRIF:12661007
GeneRIF:15085153
GeneRIF:12411058
GeneRIF:12557231
GeneRIF:15718420
Myelogenous Leukemias, Acute[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:15674355
GeneRIF:12200377
GeneRIF:11921279
GeneRIF:15604885
acute myeloid leukaemia, disease
Leukemia, Nonlymphoblastic, Acute
GeneRIF:12239147
GeneRIF:12393438
GeneRIF:14654525
GeneRIF:12127405
acute myeloid leukaemia - category[accessedResource: DOID:9119][accessDate: 04-11-2010]
Acute Myelocytic Leukemia
GeneRIF:15388581
Acute Myeloid Leukemia with Maturation[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:15282682
GeneRIF:15304385
Leukemia, Myeloid, Acute, M2[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:12239146
GeneRIF:14737077
GeneRIF:15451031
GeneRIF:15569991
GeneRIF:15522959
GeneRIF:12351411
acute myeloid leukemia in remission[accessedResource: DOID:9119][accessDate: 04-11-2010]
GeneRIF:12145704
GeneRIF:15334552
GeneRIF:11999574
GeneRIF:14689061
GeneRIF:12171774
AML
acute myeloid leukemia without mention of remission[accessedResource: DOID:9119][accessDate: 04-11-2010]
GeneRIF:16239914
Acute Myeloid Leukemia without Maturation[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:12130514
GeneRIF:12676584
GeneRIF:15289327
GeneRIF:15921740
GeneRIF:12161354
GeneRIF:12855590
GeneRIF:15725483
GeneRIF:16115907
GeneRIF:12433286
GeneRIF:12393383
GeneRIF:12187073
GeneRIF:12171773
ANLL[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:12417632
GeneRIF:12738986
Myeloblastic Leukemia, Acute[accessedResource: MSH:D015470][accessDate: 04-11-2010]
Leukemia, Myeloid, Acute, M2
GeneRIF:12145683
GeneRIF:15607361
GeneRIF:12926083
Acute Myeloid Leukemias
Acute Nonlymphocytic Leukemias[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:15983063
GeneRIF:12691136
GeneRIF:14959847
GeneRIF:12008077
GeneRIF:11920209
GeneRIF:12461747
GeneRIF:15849776
GeneRIF:12970781
GeneRIF:15489901
GeneRIF:14726504
GeneRIF:12393450
GeneRIF:11847008
GeneRIF:15959531
GeneRIF:14966562
Leukemias, Acute Myelocytic
GeneRIF:15061191
GeneRIF:15988004
GeneRIF:11986947
Leukemia, Acute Nonlymphoblastic[accessedResource: MSH:D015470][accessDate: 04-11-2010]
MSH:D015470
ANLL in Remission[accessedResource: DOID:9119][accessDate: 04-11-2010]
GeneRIF:12543865
Nonlymphocytic Leukemia, Acute
Acute Myeloid Leukemias[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:12696071
GeneRIF:12660026
GeneRIF:11986951
GeneRIF:15146183
GeneRIF:14580777
GeneRIF:15203866
GeneRIF:14749703
GeneRIF:15902282
GeneRIF:12970762
GeneRIF:15618958
GeneRIF:12036858
GeneRIF:16138343
James Malone
Clonal expansion of myeloid blasts in bone marrow, blood, and other tissue. Myeloid leukemias develop from changes in cells that normally produce NEUTROPHILS; BASOPHILS; EOSINOPHILS; and MONOCYTES.[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:12665971
GeneRIF:11714811
Leukemia, Myelogenous, Acute
GeneRIF:11830489
GeneRIF:15325104
GeneRIF:12717436
GeneRIF:14628086
GeneRIF:15234575
GeneRIF:15039279
Leukemia, Myeloid, Acute, M1
GeneRIF:12560229
GeneRIF:15772702
ICD9:205.0
acute non-lymphocytic leukaemia[accessedResource: DOID:9119][accessDate: 04-11-2010]
acute myeloid leukaemia, disease[accessedResource: DOID:9119][accessDate: 04-11-2010]
AML[accessedResource: DOID:9119][accessDate: 04-11-2010]
GeneRIF:14615378
GeneRIF:12082641
GeneRIF:15054042
Nonlymphoblastic Leukemias, Acute
GeneRIF:14654079
DOID:9119
GeneRIF:12008078
GeneRIF:12389613
GeneRIF:14654075
GeneRIF:15604894
GeneRIF:12031914
GeneRIF:14506644
GeneRIF:12854887
GeneRIF:12799277
GeneRIF:12618766
GeneRIF:12408767
ANLL in Remission
acute myeloblastic leukemia (disorder)
GeneRIF:12369998
GeneRIF:15309527
GeneRIF:14674243
GeneRIF:12637330
acute myeloid leukaemia[accessedResource: DOID:9119][accessDate: 04-11-2010]
GeneRIF:12453880
GeneRIF:12152989
Acute Myeloblastic Leukemias
GeneRIF:14630076
Leukemias, Acute Nonlymphocytic
acute myeloid leukemia in remission
GeneRIF:12060632
Leukemia, Myelocytic, Acute[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:15849769
GeneRIF:16012335
GeneRIF:15735743
acute myeloid leukemia in remission (disorder)[accessedResource: DOID:9119][accessDate: 04-11-2010]
GeneRIF:14623259
Acute Myelogenous Leukemias
acute myeloid leukemia
ANLL
GeneRIF:14966519
GeneRIF:11809673
GeneRIF:12604403
GeneRIF:14738146
GeneRIF:14762685
GeneRIF:12186696
GeneRIF:15313458
GeneRIF:11755471
Nonlymphocytic Leukemia, Acute[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:15128421
GeneRIF:12208746
GeneRIF:15831697
GeneRIF:14576828
GeneRIF:12070009
GeneRIF:15717688
Leukemias, Acute Myeloblastic[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:11911810
Myeloid Leukemia, Acute, M1[accessedResource: MSH:D015470][accessDate: 04-11-2010]
acute myeloid leukemia without mention of remission
acute myeloid leukemia in remission (disorder)
GeneRIF:16136505
UMLS:C0596227
British
Tomasz Adamusiak
larval stage
tadpole stage
WBIs:0000023
FBdv:00005336
tadpole stage[accessedResource: MAT:0000400][accessDate: 04-11-2010]
XAO:1000008
MAT:0000400
James Malone
HeLa-S3
Ele Holloway
Caki1
Caki-1
James Malone
MALT lymphoma
James Malone
The role of a chemical to be an anti-inflammatory drug.
http://www.ebi.ac.uk/efo/EFO_0001815
http://purl.org/obo/owl/CHEBI#CHEBI_51086
A role played by the molecular entity or part thereof within a chemical context.
chemical role
James Malone
SNOMEDCT:276803003
Adenocarcinoma of oesophagus
NCIt:C4025
GeneRIF:15720819
A malignant tumor with glandular differentiation arising predominantly from Barrett mucosa in the lower third of the esophagus. Rare examples of esophageal adenocarcinoma deriving from ectopic gastric mucosa in the upper esophagus have also been reported. Grossly, esophageal adenocarcinomas are similar to esophageal squamous cell carcinomas. Microscopically, adenocarcinomas arising in the setting of Barrett esophagus are typically papillary and/or tubular. The prognosis is poor.[accessedResource: NCIt:C4025][accessDate: 04-11-2010]
GeneRIF:12771886
A malignant tumor with glandular differentiation arising predominantly from Barrett mucosa in the lower third of the esophagus. Rare examples of esophageal adenocarcinoma deriving from ectopic gastric mucosa in the upper esophagus have also been reported. Grossly, esophageal adenocarcinomas are similar to esophageal squamous cell carcinomas. Microscopically, adenocarcinomas arising in the setting of Barrett esophagus are typically papillary and/or tubular. The prognosis is poor.
Adenocarcinoma of the Esophagus[accessedResource: NCIt:C4025][accessDate: 04-11-2010]
Adenocarcinoma of the Esophagus
Adenocarcinoma of Esophagus
GeneRIF:15526353
GeneRIF:15680394
GeneRIF:15688381
Esophagus Adenocarcinoma[accessedResource: NCIt:C4025][accessDate: 04-11-2010]
DOID:4914
GeneRIF:15517897
adenocarcinoma of esophagus[accessedResource: DOID:4914][accessDate: 04-11-2010]
Adenocarcinoma of oesophagus[accessedResource: SNOMEDCT:276803003][accessDate: 04-11-2010]
adenocarcinoma of esophagus (disorder)
GeneRIF:12112555
Oesophageal adenocarcinoma NOS[accessedResource: DOID:4914][accessDate: 04-11-2010]
Adenocarcinoma of esophagus (disorder)[accessedResource: SNOMEDCT:276803003][accessDate: 04-11-2010]
Esophagus Adenocarcinoma
Oesophageal adenocarcinoma NOS
James Malone
GeneRIF:16040301
esophageal adenocarcinoma
GM12813
James Malone
MAT:0000242
branchial arch
One of a series of bony or cartilaginous arches that develop in the walls of the mouth cavity and pharynx of a vertebrate embryo, consist typically of a curved segmented bar or rod on each side meeting the contralateral bar or rod at the ventral end, and correspond to the gill arches of fishes and amphibians.
visceral arch[accessedResource: BTO:0001785][accessDate: 04-11-2010]
visceral arch
One of a series of bony or cartilaginous arches that develop in the walls of the mouth cavity and pharynx of a vertebrate embryo, consist typically of a curved segmented bar or rod on each side meeting the contralateral bar or rod at the ventral end, and correspond to the gill arches of fishes and amphibians.[accessedResource: BTO:0001785][accessDate: 04-11-2010]
ZFA:0001306
pharyngeal arches
pharyngeal arch
James Malone
pharyngeal arches[accessedResource: ZFA:0001306][accessDate: 04-11-2010]
BTO:0001785
branchial arch[accessedResource: BTO:0001785][accessDate: 04-11-2010]
HCC1954
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158860&type=germplasm
CS57836 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158860&type=germplasm
CS57836
James Malone
Neurofibroma NOS (morphologic abnormality)[accessedResource: DOID:962][accessDate: 04-11-2010]
Nerve sheath tumor
James Malone
Neurofibroma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:89084002][accessDate: 04-11-2010]
[M]Neurofibroma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189947001][accessDate: 04-11-2010]
[M]Neurofibroma NOS
Neurofibroma (morphologic abnormality)[accessedResource: SNOMEDCT:89084002][accessDate: 04-11-2010]
Neurofibroma, no ICD-O subtype (morphologic abnormality)
Nerve sheath tumor (morphologic abnormality)
An intraneural or extraneural neoplasm arising from nerve tissues and neural sheaths. It is composed of perineurial-like fibroblasts and Schwann cells. It usually presents as a localized cutaneous lesion and less often as a circumscribed peripheral nerve mass. Patients with neurofibromatosis type 1 present with multiple masses. Neurofibromas which arise from major nerves and plexiform neurofibromas are precursor lesions to malignant peripheral nerve sheath tumors.
Nerve sheath tumor (morphologic abnormality)[accessedResource: SNOMEDCT:115242003][accessDate: 04-11-2010]
NIFSTD:birnlex_12604
An intraneural or extraneural neoplasm arising from nerve tissues and neural sheaths. It is composed of perineurial-like fibroblasts and Schwann cells. It usually presents as a localized cutaneous lesion and less often as a circumscribed peripheral nerve mass. Patients with neurofibromatosis type 1 present with multiple masses. Neurofibromas which arise from major nerves and plexiform neurofibromas are precursor lesions to malignant peripheral nerve sheath tumors.[accessedResource: NCIt:C3272][accessDate: 04-11-2010]
Nerve sheath tumour[accessedResource: SNOMEDCT:115242003][accessDate: 04-11-2010]
A moderately firm, benign, encapsulated tumor resulting from proliferation of SCHWANN CELLS and FIBROBLASTS that includes portions of nerve fibers. The tumors usually develop along peripheral or cranial nerves and are a central feature of NEUROFIBROMATOSIS 1, where they may occur intracranially or involve spinal roots. Pathologic features include fusiform enlargement of the involved nerve. Microscopic examination reveals a disorganized and loose cellular pattern with elongated nuclei intermixed with fibrous strands. (From Adams et al., Principles of Neurology, 6th ed, p1016)[accessedResource: MSH:D009455][accessDate: 04-11-2010]
Neurofibromas[accessedResource: MSH:D009455][accessDate: 04-11-2010]
[M]Neurofibroma NOS (morphologic abnormality)
NCIt:C3272
Nerve sheath tumour
A moderately firm, benign, encapsulated tumor resulting from proliferation of SCHWANN CELLS and FIBROBLASTS that includes portions of nerve fibers. The tumors usually develop along peripheral or cranial nerves and are a central feature of NEUROFIBROMATOSIS 1, where they may occur intracranially or involve spinal roots. Pathologic features include fusiform enlargement of the involved nerve. Microscopic examination reveals a disorganized and loose cellular pattern with elongated nuclei intermixed with fibrous strands (MeSH).
Neurofibroma, no ICD-O subtype
A moderately firm, benign, encapsulated tumor resulting from proliferation of SCHWANN CELLS and FIBROBLASTS that includes portions of nerve fibers. The tumors usually develop along peripheral or cranial nerves and are a central feature of NEUROFIBROMATOSIS 1, where they may occur intracranially or involve spinal roots. Pathologic features include fusiform enlargement of the involved nerve. Microscopic examination reveals a disorganized and loose cellular pattern with elongated nuclei intermixed with fibrous strands. (From Adams et al., Principles of Neurology, 6th ed, p1016)
Neurofibromas
SNOMEDCT:404029005
Neurofibroma (morphologic abnormality)
[M]Neurofibromas[accessedResource: SNOMEDCT:115242003][accessDate: 04-11-2010]
Neurofibroma (disorder)[accessedResource: DOID:962][accessDate: 04-11-2010]
Neurofibroma, NOS[accessedResource: SNOMEDCT:89084002][accessDate: 04-11-2010]
MSH:D009455
[M]Neurofibromas
SNOMEDCT:189947001
DOID:962
Nerve sheath tumor[accessedResource: SNOMEDCT:115242003][accessDate: 04-11-2010]
[M]Neurofibroma NOS[accessedResource: SNOMEDCT:189947001][accessDate: 04-11-2010]
neurofibroma
Tomasz Adamusiak
SNOMEDCT:89084002
Neurofibroma (disorder)
Neurofibroma, NOS
GeneRIF:15652750
Neurofibroma NOS (morphologic abnormality)
GeneRIF:14679180
SNOMEDCT:115242003
A moderately firm, benign, encapsulated tumor resulting from proliferation of SCHWANN CELLS and FIBROBLASTS that includes portions of nerve fibers. The tumors usually develop along peripheral or cranial nerves and are a central feature of NEUROFIBROMATOSIS 1, where they may occur intracranially or involve spinal roots. Pathologic features include fusiform enlargement of the involved nerve. Microscopic examination reveals a disorganized and loose cellular pattern with elongated nuclei intermixed with fibrous strands (MeSH).[accessedResource: NIFSTD:birnlex_12604][accessDate: 04-11-2010]
Neurofibroma, no ICD-O subtype[accessedResource: SNOMEDCT:89084002][accessDate: 04-11-2010]
floral transition
ES2
James Malone
Ele Holloway
MO_881
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#biosequence_provider
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#biosequence_provider[accessedResource: MO_881][accessDate: 04-11-2010]
biosequence provider
Tomasz Adamusiak
WBbt:0005255
FBbt:00003126
Oral part of face
EV:0100057
The anterior opening of the stomodeum located between the cibarium and pharynx; not to be confused with the secondary mouth (anterior opening of the cibarium) or the tertiary mouth (anterior opening of the food meatus).[accessedResource: TGMA:0000131][accessDate: 04-11-2010]
James Malone
anatomische Mund
Rima oris[accessedResource: TGMA:0000131][accessDate: 04-11-2010]
mouth structure
buccal cavity[accessedResource: MAT:0000038][accessDate: 04-11-2010]
mouth[accessedResource: TAO:0000547][accessDate: 04-11-2010]
Oral part of face[accessedResource: FMAID:49184][accessDate: 04-11-2010]
pharyngeal valve
valve
adult mouth
adult mouth[accessedResource: FBbt:00003126][accessDate: 04-11-2010]
TAO:0000547
EMAPA:16262
XAO:0000126
AAO:0000053
TGMA:0000131
The natural opening through which food passes into the body of an animal and which in vertebrates is typically bounded externally by the lips and internally by the pharynx and encloses the tongue, gums, and teeth.
Mouth
oral cavity
pharyngeal valve[accessedResource: TGMA:0000131][accessDate: 04-11-2010]
The natural opening through which food passes into the body of an animal and which in vertebrates is typically bounded externally by the lips and internally by the pharynx and encloses the tongue, gums, and teeth.[accessedResource: BTO:0001090][accessDate: 04-11-2010]
MA:0000341
valve[accessedResource: TGMA:0000131][accessDate: 04-11-2010]
buccal cavity
FMAID:49184
Oral region
XAO:0003029
ZFA:0000547
TADS:0000040
Rima oris
anatomische Mund[accessedResource: TGMA:0000131][accessDate: 04-11-2010]
MAT:0000038
oral cavity[accessedResource: MAT:0000038][accessDate: 04-11-2010]
Oral region[accessedResource: FMAID:49184][accessDate: 04-11-2010]
BTO:0001090
The anterior opening of the stomodeum located between the cibarium and pharynx; not to be confused with the secondary mouth (anterior opening of the cibarium) or the tertiary mouth (anterior opening of the food meatus).
mature T cell[accessedResource: CL:0000084][accessDate: 04-11-2010]
T-lymphocyte
T cell
A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.[accessedResource: CL:0000084][accessDate: 04-11-2010]
pancreatic T effector cell
immature T cell[accessedResource: CL:0000084][accessDate: 04-11-2010]
Th2
T-lymphocyte[accessedResource: CL:0000084][accessDate: 04-11-2010]
immature T cell
A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.
Th1
James Malone
CL:0000084
mature T cell
birn_anat:birnlex_1204
MA:0000952
hippocampus CA3
Tomasz Adamusiak
YCC3
James Malone
Ele Holloway
GeneRIF:14576477
Barretts Esophagus[accessedResource: MSH:D001471][accessDate: 04-11-2010]
Barrett's esophagus
Syndrome, Barrett
Barrett's esophagus with esophagitis (disorder)[accessedResource: DOID:9206][accessDate: 04-11-2010]
Barrett Syndrome[accessedResource: MSH:D001471][accessDate: 04-11-2010]
Barrett Epithelium
Barretts Esophagus
(ulcerative esophagitis) or (Barrett's esophagus)
Barrett's Syndrome
GeneRIF:15041721
GeneRIF:15810620
Barretts Syndrome[accessedResource: MSH:D001471][accessDate: 04-11-2010]
Barrett's oesophagus[accessedResource: DOID:9206][accessDate: 04-11-2010]
GeneRIF:15167938
James Malone
Barrett's esophagus (disorder) [Ambiguous]
DOID:9206
Barrett's esophagus (disorder)
A condition with damage to the lining of the lower ESOPHAGUS resulting from chronic acid reflux (ESOPHAGITIS, REFLUX). Through the process of metaplasia, the squamous cells are replaced by a columnar epithelium with cells resembling those of the INTESTINE or the salmon-pink mucosa of the STOMACH. Barrett's columnar epithelium is a marker for severe reflux and precursor to ADENOCARCINOMA of the esophagus.[accessedResource: MSH:D001471][accessDate: 04-11-2010]
A condition with damage to the lining of the lower ESOPHAGUS resulting from chronic acid reflux (ESOPHAGITIS, REFLUX). Through the process of metaplasia, the squamous cells are replaced by a columnar epithelium with cells resembling those of the INTESTINE or the salmon-pink mucosa of the STOMACH. Barrett's columnar epithelium is a marker for severe reflux and precursor to ADENOCARCINOMA of the esophagus.
GeneRIF:15824739
Barrett's oesophagus
Barrett Esophagus
Esophagus, Barrett[accessedResource: MSH:D001471][accessDate: 04-11-2010]
GeneRIF:15231484
Barrett's ulcer of esophagus (disorder)[accessedResource: DOID:9206][accessDate: 04-11-2010]
GeneRIF:15013707
Barrett's ulcer of esophagus (disorder)
ICD9:530.85
(ulcerative esophagitis) or (Barrett's esophagus)[accessedResource: DOID:9206][accessDate: 04-11-2010]
MSH:D001471
GeneRIF:11857318
GeneRIF:15878911
GeneRIF:15716603
Barrett's esophagus (disorder) [Ambiguous][accessedResource: DOID:9206][accessDate: 04-11-2010]
Barrett Epithelium[accessedResource: MSH:D001471][accessDate: 04-11-2010]
CLE
CLE[accessedResource: DOID:9206][accessDate: 04-11-2010]
Barrett's esophagus (disorder)[accessedResource: DOID:9206][accessDate: 04-11-2010]
GeneRIF:15967118
Barrett's esophagus with esophagitis (disorder)
GeneRIF:16291394
N-Ethylnitrosourea
N-Ethyl-N-nitroso carbamide
ENU
CHEBI:23995
InChIKey=FUSGACRLAFQQRL-LGEMBHMGCE
http://www.ebi.ac.uk/efo/EFO_0001533
C3H7N3O2
NEU
1-(Aminocarbonyl)-1-ethyl-2-oxohydrazine
A urea compound having ethyl and nitroso substituents in the 1-position.
CCN(N=O)C(N)=O
Aethylnitroso-harnstoff
N-Ethyl-N-nitroso-urea
InChI=1/C3H7N3O2/c1-2-6(5-8)3(4)7/h2H2,1H3,(H2,4,7)/f/h4H2
ethyl nitrosourea
1-ethyl-1-nitrosourea
InChI=1/C22H18Cl2FNO3/c1-22(2)15(11-19(23)24)20(22)21(27)29-18(12-26)13-8-9-16(25)17(10-13)28-14-6-4-3-5-7-14/h3-11,15,18,20H,1-2H3
James Malone
CC1(C)C(C=C(Cl)Cl)C1C(=O)OC(C#N)c1ccc(F)c(Oc2ccccc2)c1
InChIKey=QQODLKZGRKWIFG-UHFFFAOYAM
CHEBI:4034
cyano(4-fluoro-3-phenoxyphenyl)methyl 3-(2,2-dichloroethenyl)-2,2-dimethylcyclopropanecarboxylate
(R,S)-alpha-Cyano-4-fluoro-3-phenoxybenzyl-(1R,S)-cis,trans-3-(2,2-dichlorovinyl)-2,2-dimethylcyclopropanecarboxylate
http://www.ebi.ac.uk/efo/EFO_0001515
C22H18Cl2FNO3
cyfluthrin
The malignant human B-cell-line BJAB is a EBV-negative Burkitt-like lymphoma cell line.
Ele Holloway
James Malone
BJAB
BTO:0001931
BJAB cell
BJAB cell[accessedResource: BTO:0001931][accessDate: 04-11-2010]
The malignant human B-cell-line BJAB is a EBV-negative Burkitt-like lymphoma cell line.[accessedResource: BTO:0001931][accessDate: 04-11-2010]
James Malone
HMEC
CNS[accessedResource: FMAID:55675][accessDate: 04-11-2010]
CNS
Organ with organ cavity which consists of gray matter and white matter. Examples: There is only one neuraxis.
Cerebrospinal axis[accessedResource: FMAID:55675][accessDate: 04-11-2010]
TAO:0000012
ZFA:0000012
EV:0100163
BTO:0000227
The brain and spinal cord.[accessedResource: ZFA:0000012][accessDate: 04-11-2010]
EMAPA:16470
The central nervous system is that part of the nervous system that consists of the brain and spinal cord. The central nervous system (CNS) is one of the two major divisions of the nervous system. The other is the peripheral nervous system (PNS) which is outside the brain and spinal cord.[accessedResource: BTO:0000227][accessDate: 04-11-2010]
The central nervous system is that part of the nervous system that consists of the brain and spinal cord. The central nervous system (CNS) is one of the two major divisions of the nervous system. The other is the peripheral nervous system (PNS) which is outside the brain and spinal cord.
Neuraxis
EHDAA:828
The brain and spinal cord. Kimmel et al, 1995.
FMAID:55675
James Malone
The brain and spinal cord.
central nervous system
Neuraxis[accessedResource: FMAID:55675][accessDate: 04-11-2010]
MA:0000167
NIFSTD:birnlex_1099
The brain and spinal cord. Kimmel et al, 1995.[accessedResource: TAO:0000012][accessDate: 04-11-2010]
Cerebrospinal axis
MAT:0000457
Tomasz Adamusiak
gene name
petal
GRO:0005667
MAT:0000354
The often showy flower component attached just inside the sepals; petals are usually colorful to attract pollinators.
James Malone
GRO:0005667[accessedResource: BTO:0001040][accessDate: 04-11-2010]
BTO:0001040
The often showy flower component attached just inside the sepals; petals are usually colorful to attract pollinators.[accessedResource: BTO:0001040][accessDate: 04-11-2010]
PO:0009032
http://www.ebi.ac.uk/efo/EFO_0001718
picoliter
Jie Zheng
true
MO_905
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pl
Tomasz Adamusiak
James Malone
pl
A volume unit which is equal to 10^[-12] L.
A picoliter is a volume unit which is equal to 10^-12 L.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pl[accessedResource: MO_905][accessDate: 04-11-2010]
Publication published in a journal.
published
Tomasz Adamusiak
2,2-Di(4-hydroxyphenyl)propane
http://www.ebi.ac.uk/efo/EFO_0001493
InChIKey=IISBACLAFKSPIT-UHFFFAOYAI
4,4'-Isopropylidenediphenol
bisphenol A
2,2-Bis(4-Hydroxyphenyl)propane
A bisphenol that has formula C15H16O2.
C15H16O2
CHEBI:33216
2,2-Bis(p-hydroxyphenyl)propane
4,4'-(propane-2,2-diyl)diphenol
InChI=1/C15H16O2/c1-15(2,11-3-7-13(16)8-4-11)12-5-9-14(17)10-6-12/h3-10,16-17H,1-2H3
CC(C)(c1ccc(O)cc1)c1ccc(O)cc1
2,2-Di(4-phenylol)propane
4,4'-(1-Methylethylidene)bisphenol
4,4'-Bisphenol A
is equivalent to an instance of class organism
true
Identifier or name of the individual organism from which the biomaterial was derived.
obsolete_individual
BTO:0000486
GRO:0005250
fruit
The mature ovary or ovaries of a seed-bearing plant, together with accessory parts, containing the seeds and occurring in a wide variety of forms.[accessedResource: BTO:0000486][accessDate: 04-11-2010]
MAT:0000232
GRO:0005250[accessedResource: BTO:0000486][accessDate: 04-11-2010]
The mature ovary or ovaries of a seed-bearing plant, together with accessory parts, containing the seeds and occurring in a wide variety of forms.
PO:0009001
James Malone
silique
FMAID:7409
bronchus
Either of the two primary divisions of the trachea that lead respectively into the right and the left lung.[accessedResource: BTO:0001340][accessDate: 04-11-2010]
main bronchus
Bronchial trunk[accessedResource: FMAID:7409][accessDate: 04-11-2010]
Bronchial trunk
James Malone
MAT:0000133
EV:0100041
main bronchus[accessedResource: MAT:0000133][accessDate: 04-11-2010]
EMAPA:16849
BTO:0001340
Either of the two primary divisions of the trachea that lead respectively into the right and the left lung.
MA:0000436
EHDAA:3072
XAO:0000121
SAEL:14
FMAID:3768
Arch of aorta
Arch of aorta[accessedResource: FMAID:3768][accessDate: 04-11-2010]
aortic arch
Tomasz Adamusiak
Jie Zheng
Stratified squamous epithelium that covers the outer surface of the cornea. (MeSH)
epithelium posterius corneae[accessedResource: BTO:0000287][accessDate: 04-11-2010]
endothelium corneale
corneal endothelium
corneal epithelium
endothelium camerae anterioris bulbi[accessedResource: BTO:0000287][accessDate: 04-11-2010]
Posterior epithelium of cornea: the mesothelial layer covering the posterior surface of the posterior limiting lamina of the cornea; it was once believed to extend to the anterior surface of the stroma of the iris.[accessedResource: BTO:0000287][accessDate: 04-11-2010]
endothelium corneale[accessedResource: BTO:0000287][accessDate: 04-11-2010]
endothelium camerae anterioris bulbi
anterior endothelium of cornea
epithelium posterius corneae
NCIt:C12928
James Malone
endothelium anterius corneae[accessedResource: BTO:0000287][accessDate: 04-11-2010]
anterior endothelium of cornea[accessedResource: BTO:0000287][accessDate: 04-11-2010]
corneal endothelium[accessedResource: BTO:0000287][accessDate: 04-11-2010]
endothelium anterius corneae
Stratified squamous epithelium that covers the outer surface of the cornea. (MeSH)[accessedResource: NCIt:C12928][accessDate: 04-11-2010]
Posterior epithelium of cornea: the mesothelial layer covering the posterior surface of the posterior limiting lamina of the cornea; it was once believed to extend to the anterior surface of the stroma of the iris.
BTO:0000287
A red blood cell. In mammals, mature erythrocytes are biconcave disks containing hemoglobin whose function is to transport oxygen.
Any of the hemoglobin-containing cells that carry oxygen to the tissues and are responsible for the red color of vertebrate blood.
BTO:0000424
red blood corpuscle
red blood corpuscle[accessedResource: BTO:0000424][accessDate: 04-11-2010]
erythrocyte
CL:0000232
RBC[accessedResource: CL:0000232][accessDate: 04-11-2010]
red blood cell[accessedResource: CL:0000232][accessDate: 04-11-2010]
Any of the hemoglobin-containing cells that carry oxygen to the tissues and are responsible for the red color of vertebrate blood.[accessedResource: BTO:0000424][accessDate: 04-11-2010]
red blood cell
RBC
A red blood cell. In mammals, mature erythrocytes are biconcave disks containing hemoglobin whose function is to transport oxygen.[accessedResource: CL:0000232][accessDate: 04-11-2010]
A red blood cell. In mammals, mature erythrocytes are non-nucleated, biconcave disks containing hemoglobin whose function is to transport oxygen.
James Malone
https://www.cbil.upenn.edu/RADQuerier/php/sampleInfo.php?assay_id=8647&&study_id=2424
C57Bl/10 derived non-diabetic mouse strain expressing H2g7 and Idd3
B10.NOD_H2g7_Idd3
Tomasz Adamusiak
Jie Zheng
naphthalene-1,5-diamine
A naphthalenediamine compound having amino substituents in the 1- and 5-positions.
http://www.ebi.ac.uk/efo/EFO_0002492
Nc1cccc2c(N)cccc12
C10H10N2
Ele Holloway
CHEBI:53003
1,5-Diaminonaphthalene
1,5-Naphthylenediamine
InChIKey=KQSABULTKYLFEV-UHFFFAOYAR
James Malone
1,5-Naphthalenediamine
InChI=1/C10H10N2/c11-9-5-1-3-7-8(9)4-2-6-10(7)12/h1-6H,11-12H2
benign tumor
benign neoplasm
Tomasz Adamusiak
James Malone
Fibroses, Liver[accessedResource: MSH:D008103][accessDate: 04-11-2010]
NCIt:C2951
GeneRIF:12829439
Liver Fibrosis[accessedResource: MSH:D008103][accessDate: 04-11-2010]
GeneRIF:12127815
GeneRIF:16015705
Cirrhoses, Hepatic
Hepatic cirrhosis
A disorder characterized by replacement of the liver parenchyma with fibrous tissue and regenerative nodules. It is usually caused by alcoholisms, hepatitis B, and hepatitis C. Complications include the development of ascites, esophageal varices, bleeding, and hepatic encephalopathy.[accessedResource: NCIt:C2951][accessDate: 04-11-2010]
GeneRIF:12829997
Liver disease in which the normal microcirculation, the gross vascular anatomy, and the hepatic architecture have been variably destroyed and altered with fibrous septa surrounding regenerated or regenerating parenchymal nodules.
GeneRIF:14961153
MSH:D008103
James Malone
GeneRIF:15982324
GeneRIF:15765409
GeneRIF:15094940
A disorder characterized by replacement of the liver parenchyma with fibrous tissue and regenerative nodules. It is usually caused by alcoholisms, hepatitis B, and hepatitis C. Complications include the development of ascites, esophageal varices, bleeding, and hepatic encephalopathy.
Hepatic cirrhosis, NOS
Cirrhosis of liver NOS (disorder)
Fibrosis, Liver
GeneRIF:12532467
GeneRIF:11953887
GeneRIF:15239259
Hepatic Cirrhoses[accessedResource: MSH:D008103][accessDate: 04-11-2010]
Cirrhosis of liver without mention of alcohol[accessedResource: SNOMEDCT:19943007][accessDate: 04-11-2010]
Cirrhoses, Liver[accessedResource: MSH:D008103][accessDate: 04-11-2010]
GeneRIF:15808312
CL - Cirrhosis of liver[accessedResource: SNOMEDCT:19943007][accessDate: 04-11-2010]
SNOMEDCT:235891006
GeneRIF:15104370
GeneRIF:14768003
GeneRIF:16255765
Cirrhosis of liver (disorder)
Cirrhoses, Liver
cirrhosis of liver
Cirrhosis[accessedResource: NCIt:C2951][accessDate: 04-11-2010]
GeneRIF:15956070
Cirrhosis of liver, NOS
liver cirrhosis[accessedResource: DOID:5082][accessDate: 04-11-2010]
GeneRIF:12945872
Liver disease in which the normal microcirculation, the gross vascular anatomy, and the hepatic architecture have been variably destroyed and altered with fibrous septa surrounding regenerated or regenerating parenchymal nodules.[accessedResource: MSH:D008103][accessDate: 04-11-2010]
Hepatic cirrhosis[accessedResource: SNOMEDCT:19943007][accessDate: 04-11-2010]
Fibroses, Liver
GeneRIF:15742396
GeneRIF:12631357
GeneRIF:16098781
GeneRIF:15222038
GeneRIF:15172884
Cirrhosis of liver NOS[accessedResource: DOID:5082][accessDate: 04-11-2010]
cirrhosis
GeneRIF:12971960
Cirrhosis of liver NOS (disorder)[accessedResource: SNOMEDCT:235891006][accessDate: 04-11-2010]
GeneRIF:12757931
GeneRIF:12842454
Cirrhosis of liver without mention of alcohol
SNOMEDCT:19943007
GeneRIF:15710227
GeneRIF:15550559
GeneRIF:15737463
liver cirrhosis
CL - Cirrhosis of liver
DOID:5082
GeneRIF:15368451
GeneRIF:14669345
Cirrhosis of liver (disorder)[accessedResource: SNOMEDCT:19943007][accessDate: 04-11-2010]
GeneRIF:15094224
GeneRIF:15956705
Hepatic cirrhosis, NOS[accessedResource: SNOMEDCT:19943007][accessDate: 04-11-2010]
diet
The customary allowance of food and drink taken by a person or an animal from day to day, particularly one especially planned to meet specific requirements of the individual, including or excluding certain items of food; a prescribed course of eating and drinking in which the amount and kind of food, as well as the times at which it is to be taken, are regulated for therapeutic purposes or selected with reference to a particular state of health.
Dietary[accessedResource: NCIt:C15222][accessDate: 04-11-2010]
Jie Zheng
Dietary
The customary allowance of food and drink taken by a person or an animal from day to day, particularly one especially planned to meet specific requirements of the individual, including or excluding certain items of food; a prescribed course of eating and drinking in which the amount and kind of food, as well as the times at which it is to be taken, are regulated for therapeutic purposes or selected with reference to a particular state of health.[accessedResource: NCIt:C15222][accessDate: 04-11-2010]
NCIt:C15222
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158593&type=germplasm
CS57569 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158593&type=germplasm
CS57569
James Malone
MAT:0000478
stomach anlage
An anlage is a tissue modifier describing some tissue which precedes something other, such as a precursor or forerunner for a more mature structure. For example, the stomach anlage.
anlage
James Malone
monocyte-derived intermediate cell
Glioblastoma H54 is a cell line derived from
H54
glioblastoma H54
WI38
James Malone
GeneRIF:12080392
GeneRIF:12393799
Total Deafness
GeneRIF:12968670
GeneRIF:14727813
GeneRIF:12111646
Deafness NOS (disorder)
GeneRIF:12527136
GeneRIF:12022040
GeneRIF:14648237
GeneRIF:15099592
GeneRIF:12107438
Deafness NOS
A partial or complete loss o f hearing in one or both ears; the level of impairment varies from a mild but important loss of sensitivity to a total loss of hearing.
GeneRIF:12172392
GeneRIF:15710493
GeneRIF:12471561
SNOMEDCT:267678002
GeneRIF:12865758
GeneRIF:11584050
A partial or complete loss o f hearing in one or both ears; the level of impairment varies from a mild but important loss of sensitivity to a total loss of hearing.[accessedResource: NCIt:C27644][accessDate: 04-11-2010]
GeneRIF:15944150
GeneRIF:11977173
GeneRIF:11870684
NCIt:C27644
GeneRIF:15855033
GeneRIF:12746400
GeneRIF:12384781
GeneRIF:12687499
GeneRIF:12382103
GeneRIF:15891640
GeneRIF:12910270
GeneRIF:12620969
GeneRIF:12081719
GeneRIF:12505163
GeneRIF:11907649
GeneRIF:12621333
GeneRIF:12642503
GeneRIF:12068628
Complete deafness (finding)[accessedResource: DOID:10005][accessDate: 04-11-2010]
Bilateral Deafness
Deafness NOS (finding)
GeneRIF:15286153
GeneRIF:12403827
GeneRIF:12062767
GeneRIF:11333869
GeneRIF:15314067
GeneRIF:15226564
GeneRIF:12032315
GeneRIF:11807148
complete hearing loss
Bilateral deafness (finding)
GeneRIF:15905332
DOID:10005
Deafness NOS (disorder)[accessedResource: SNOMEDCT:267678002][accessDate: 04-11-2010]
GeneRIF:12161469
GeneRIF:11976689
GeneRIF:14985365
GeneRIF:14556203
GeneRIF:14570705
GeneRIF:12920079
GeneRIF:12792423
GeneRIF:11709538
GeneRIF:12687421
GeneRIF:15015131
Bilateral deafness (finding)[accessedResource: DOID:10005][accessDate: 04-11-2010]
GeneRIF:14532115
GeneRIF:11924819
GeneRIF:12393794
An inherited or acquired condition characterized by the complete loss of the ability to hear from one or both ears.[accessedResource: NCIt:C27644][accessDate: 04-11-2010]
GeneRIF:11850618
GeneRIF:12107817
GeneRIF:12176036
GeneRIF:16155570
GeneRIF:15996220
GeneRIF:15490091
GeneRIF:12419304
Deafness NOS (finding)[accessedResource: SNOMEDCT:267678002][accessDate: 04-11-2010]
GeneRIF:15464308
GeneRIF:12136232
GeneRIF:12370316
GeneRIF:12140191
GeneRIF:11972037
GeneRIF:12560944
GeneRIF:12833159
GeneRIF:15579465
GeneRIF:12075507
Total Deafness[accessedResource: DOID:10005][accessDate: 04-11-2010]
deafness
GeneRIF:12651873
GeneRIF:12655418
GeneRIF:16088916
GeneRIF:11432967
GeneRIF:15083701
GeneRIF:11896458
GeneRIF:15326186
GeneRIF:14644237
GeneRIF:12522556
GeneRIF:12145746
GeneRIF:15857852
Complete deafness (finding)
An inherited or acquired condition characterized by the complete loss of the ability to hear from one or both ears.
GeneRIF:12904681
GeneRIF:15044642
GeneRIF:12189487
GeneRIF:15350283
GeneRIF:12114484
GeneRIF:12325029
GeneRIF:14684684
GeneRIF:12810983
GeneRIF:11668644
GeneRIF:15482471
GeneRIF:12127154
GeneRIF:15300860
James Malone
GeneRIF:12064630
GeneRIF:15886106
GeneRIF:12490528
GeneRIF:14585957
GeneRIF:12654476
GeneRIF:12189493
complete hearing loss[accessedResource: DOID:10005][accessDate: 04-11-2010]
Deafness, NOS[accessedResource: DOID:10005][accessDate: 04-11-2010]
GeneRIF:12746422
GeneRIF:14552423
GeneRIF:12717441
GeneRIF:15542390
GeneRIF:12169891
GeneRIF:12483295
GeneRIF:12121736
GeneRIF:12393046
Bilateral Deafness[accessedResource: DOID:10005][accessDate: 04-11-2010]
DOID:7474
malignant pleural mesothelioma
GeneRIF:15829320
GeneRIF:14719068
Mesothelioma (malignant) of pleura (disorder)
James Malone
GeneRIF:15014036
malignant mesothelioma of pleura
Malignant Mesothelioma of Pleura[accessedResource: NCIt:C7376][accessDate: 04-11-2010]
Malignant Mesothelioma of the Pleura[accessedResource: NCIt:C7376][accessDate: 04-11-2010]
NCIt:C7376
malignant mesothelioma of pleura (disorder)[accessedResource: DOID:7474][accessDate: 04-11-2010]
Malignant Mesothelioma of the Pleura
SNOMEDCT:254645002
A TERV is a cell line.
A TERV derives from a kidney.
TERV
Natural Language Generator 8th April 2010
James Malone
Invasive Ductal Carcinoma, No Specific Type
The most common type of invasive breast carcinoma, accounting for approximately 70% of breast carcinomas. The gross appearance is usually typical with an irregular stellate outline. Microscopically, randomly arranged epithelial elements are seen. When large sheets of malignant cells are present, necrosis may be seen. With adequate tissue sampling, in situ carcinoma can be demonstrated in association with the infiltrating carcinoma. The in situ component is nearly always ductal but occasionally may be lobular or both.
Invasive Ductal Carcinoma, NST
Invasive Ductal Carcinoma, No Specific Type[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Invasive Ductal Breast Carcinoma[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Invasive Ductal Breast Carcinoma
Invasive Ductal Carcinoma, NOS
Infiltrating Ductal Carcinoma
Infiltrating Ductal Carcinoma of Breast[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Invasive Ductal Carcinoma, Not Otherwise Specified[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Infiltrating Ductal Breast Carcinoma
The most common type of invasive breast carcinoma, accounting for approximately 70% of breast carcinomas. The gross appearance is usually typical with an irregular stellate outline. Microscopically, randomly arranged epithelial elements are seen. When large sheets of malignant cells are present, necrosis may be seen. With adequate tissue sampling, in situ carcinoma can be demonstrated in association with the infiltrating carcinoma. The in situ component is nearly always ductal but occasionally may be lobular or both.[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
NCIt:C4194
Invasive Ductal Adenocarcinoma
Tomasz Adamusiak
Infiltrating Ductal Carcinoma of the Breast[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Infiltrating Ductal Carcinoma of the Breast
Infiltrating Ductal Carcinoma[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
invasive ductal carcinoma
Infiltrating Ductal Adenocarcinoma
Infiltrating Ductal Carcinoma of Breast
Invasive Ductal Carcinoma of Breast
Invasive Ductal Carcinoma, NST[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Invasive Ductal Carcinoma of the Breast
Invasive Ductal Carcinoma, NOS[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Invasive Ductal Carcinoma of the Breast[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Infiltrating Ductal Breast Carcinoma[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Invasive Ductal Carcinoma of Breast[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
James Malone
Invasive Ductal Adenocarcinoma[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Infiltrating Ductal Adenocarcinoma[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Invasive Ductal Carcinoma, Not Otherwise Specified
NCIt:C12478
Clear Cells
A cell with empty-appearing cytoplasm when viewed with a light microscope.
Clear Cells[accessedResource: NCIt:C12478][accessDate: 04-11-2010]
A cell with empty-appearing cytoplasm when viewed with a light microscope.[accessedResource: NCIt:C12478][accessDate: 04-11-2010]
clear cell
Tomasz Adamusiak
ch
ch[accessedResource: FBbt:00005215][accessDate: 04-11-2010]
scolopophorous organ
An auditory and vibration detector in insects
James Malone
scolopophorous organ[accessedResource: FBbt:00005215][accessDate: 04-11-2010]
Mechanosensory organ, generally attached to the body wall and consisting of one or more scolopidia.
chordotonal organ
An auditory and vibration detector in insects[accessedResource: MAT:0000209][accessDate: 04-11-2010]
FBbt:00005215
MAT:0000209
Chordotonal organs are arthropod sensory structures consisting of special sensilla called the scolopidia, which are mechano-transducers and respond mainly to stretch or flexion. In insects, they consist of bundles of internal sensilla, each of which has a cap cell, an enveloping cell and one or more sense cells. The distal end of the organ is usually attached to the cuticle of the body wall, marked by a pit, a thickened disc or a nodule of chitin, and the base of the organ is connected with the hypodermis, often by a special ligament.
Mechanosensory organ, generally attached to the body wall and consisting of one or more scolopidia.[accessedResource: FBbt:00005215][accessDate: 04-11-2010]
GeneRIF:15100674
A bronchial disease that is characterized by chronic inflammation and narrowing of the airways, which is caused by a combination of environmental and genetic factors resulting in recurring periods of wheezing (a whistling sound while breathing), chest tightness, shortness of breath, mucus production and coughing. The symptoms appear due to a variety of triggers such as allergens, irritants, respiratory infections, weather changes, excercise, stress, reflux disease, medications, foods and emotional anxiety.
Exercise-induced asthma (disorder)[accessedResource: DOID:2841][accessDate: 04-11-2010]
ASTHMA NOS W (AC) EXAC
GeneRIF:15356575
GeneRIF:16123393
GeneRIF:15066132
GeneRIF:16210640
Asthma (disorder)
GeneRIF:15976383
Asthmatic
GeneRIF:12642833
Bronchial asthma
Asthma NOS
GeneRIF:11940068
Asthma unspecified (disorder)
GeneRIF:15723126
GeneRIF:16027362
GeneRIF:11801688
GeneRIF:15528385
ASTHMA NOS[accessedResource: ICD9:493.90][accessDate: 04-11-2010]
Bronchial hyperresponsiveness[accessedResource: SNOMEDCT:195967001][accessDate: 04-11-2010]
GeneRIF:15087305
James Malone
GeneRIF:15604153
Bronchial hyperreactivity
GeneRIF:15115168
GeneRIF:12915772
DOID:2841
GeneRIF:15722346
GeneRIF:12847279
GeneRIF:14764726
GeneRIF:14734765
GeneRIF:15677460
GeneRIF:12751728
GeneRIF:12373000
Pneumopathy due to inhalation of other dust (disorder)[accessedResource: SNOMEDCT:196013003][accessDate: 04-11-2010]
GeneRIF:11709756
Bronchial hypersensitivity[accessedResource: DOID:2841][accessDate: 04-11-2010]
GeneRIF:11466391
GeneRIF:15223611
GeneRIF:15696081
GeneRIF:11786643
GeneRIF:12672051
GeneRIF:12575459
GeneRIF:15944327
SNOMEDCT:195967001
GeneRIF:15585884
GeneRIF:11692107
Asthma, unspecified
GeneRIF:15531759
chronic obstructive asthma with status asthmaticus
GeneRIF:15020290
GeneRIF:14520724
GeneRIF:12225952
Asthma, unspecified type, without mention of status asthmaticus
GeneRIF:11907117
GeneRIF:12847242
GeneRIF:16168397
GeneRIF:12110844
GeneRIF:15059480
GeneRIF:14610476
GeneRIF:14657864
GeneRIF:12530117
Other forms of asthma
GeneRIF:14657873
GeneRIF:16148052
GeneRIF:15153795
GeneRIF:16304252
GeneRIF:11839568
GeneRIF:12620968
GeneRIF:15612961
Pneumopathy due to inhalation of other dust NOS (disorder)
BHR - Bronchial hyperreactivity[accessedResource: SNOMEDCT:195967001][accessDate: 04-11-2010]
chronic obstructive asthma with acute exacerbation
GeneRIF:12897738
SNOMEDCT:195979001
GeneRIF:15007350
GeneRIF:12063528
GeneRIF:12938094
GeneRIF:12406828
GeneRIF:12165540
GeneRIF:12876407
GeneRIF:15059478
GeneRIF:11744622
GeneRIF:11898000
GeneRIF:15179560
Airway hyperreactivity
chronic obstructive asthma with acute exacerbation[accessedResource: DOID:2841][accessDate: 04-11-2010]
GeneRIF:14734780
GeneRIF:15764725
GeneRIF:14692664
chronic obstructive asthma[accessedResource: DOID:2841][accessDate: 04-11-2010]
asthma
GeneRIF:12047364
GeneRIF:12091879
GeneRIF:15879427
GeneRIF:16143586
GeneRIF:16115819
GeneRIF:12915771
GeneRIF:12209087
Asthma (disorder)[accessedResource: SNOMEDCT:195967001][accessDate: 04-11-2010]
GeneRIF:16215326
GeneRIF:16026590
GeneRIF:16081847
GeneRIF:15207712
GeneRIF:12682233
SNOMEDCT:196015005
GeneRIF:12813022
GeneRIF:11956218
GeneRIF:12077275
SNOMEDCT:196013003
Hyperreactive airway disease[accessedResource: SNOMEDCT:195967001][accessDate: 04-11-2010]
Pneumopathy due to inhalation of other dust NOS[accessedResource: SNOMEDCT:196015005][accessDate: 04-11-2010]
GeneRIF:15947423
GeneRIF:15318163
Bronchial asthma[accessedResource: SNOMEDCT:195967001][accessDate: 04-11-2010]
GeneRIF:16043121
Asthma, unspecified type, with acute exacerbation[accessedResource: ICD9:493.92][accessDate: 04-11-2010]
NCIt:C28397
GeneRIF:16081038
GeneRIF:12900517
Hyperreactive airways disease[accessedResource: SNOMEDCT:195979001][accessDate: 04-11-2010]
DUST PNEUMONOPATHY NEC
Asthmatic[accessedResource: SNOMEDCT:195967001][accessDate: 04-11-2010]
GeneRIF:12530118
GeneRIF:14633511
GeneRIF:15356558
GeneRIF:15454733
GeneRIF:16034130
GeneRIF:12524255
GeneRIF:11813133
ICD9:493.92
GeneRIF:11897983
GeneRIF:15007351
GeneRIF:11710537
GeneRIF:15003938
GeneRIF:11842300
Asthma NOS (disorder)
GeneRIF:11972612
GeneRIF:11972486
GeneRIF:12370400
GeneRIF:16236836
GeneRIF:12145647
GeneRIF:12774669
GeneRIF:12083965
Pneumopathy due to inhalation of other dust[accessedResource: SNOMEDCT:196013003][accessDate: 04-11-2010]
GeneRIF:15709049
Exercise-induced asthma[accessedResource: DOID:2841][accessDate: 04-11-2010]
BHR - Bronchial hyperreactivity
Bronchial hypersensitivity
GeneRIF:12671058
Pneumopathy due to inhalation of other dust NOS
Hyperreactive airway disease
chronic obstructive asthma with status asthmaticus[accessedResource: DOID:2841][accessDate: 04-11-2010]
GeneRIF:14564349
A chronic respiratory disease manifested as difficulty breathing due to the narrowing of bronchial passageways.[accessedResource: NCIt:C28397][accessDate: 04-11-2010]
Bronchial hyperresponsiveness
GeneRIF:15557163
GeneRIF:14564352
Exercise-induced asthma (disorder)
GeneRIF:11994485
GeneRIF:15051937
ASTHMA NOS W (AC) EXAC[accessedResource: ICD9:493.92][accessDate: 04-11-2010]
GeneRIF:15007353
GeneRIF:16036415
GeneRIF:15496624
GeneRIF:12861851
GeneRIF:15300848
GeneRIF:12237016
GeneRIF:12482203
ICD9:493.90
GeneRIF:15744536
GeneRIF:14707054
GeneRIF:15548573
GeneRIF:12325261
Asthma unspecified (disorder)[accessedResource: SNOMEDCT:195979001][accessDate: 04-11-2010]
GeneRIF:15282200
GeneRIF:11896460
Pneumopathy due to inhalation of other dust
GeneRIF:16098057
GeneRIF:15345705
GeneRIF:14597484
GeneRIF:15696078
GeneRIF:15602630
GeneRIF:12204890
Asthma, unspecified[accessedResource: ICD9:493.9][accessDate: 04-11-2010]
GeneRIF:15059493
GeneRIF:11668616
GeneRIF:15356557
GeneRIF:15743779
GeneRIF:15192232
Pneumonopathy due to inhalation of other dust[accessedResource: ICD9:504][accessDate: 04-11-2010]
GeneRIF:11907124
Exercise-induced asthma
GeneRIF:15961692
Airway hyperreactivity[accessedResource: SNOMEDCT:195967001][accessDate: 04-11-2010]
GeneRIF:12234263
GeneRIF:16236890
GeneRIF:12530121
GeneRIF:12897754
GeneRIF:16150927
GeneRIF:16024972
GeneRIF:12376349
GeneRIF:14761934
Asthma NOS (disorder)[accessedResource: SNOMEDCT:266365004][accessDate: 04-11-2010]
GeneRIF:15817799
Asthma, unspecified type, without mention of status asthmaticus[accessedResource: ICD9:493.90][accessDate: 04-11-2010]
bronchial hyperreactivity[accessedResource: DOID:2841][accessDate: 04-11-2010]
GeneRIF:11725301
Pneumonopathy due to inhalation of other dust
GeneRIF:15579447
GeneRIF:12204872
Hyperreactive airways disease
GeneRIF:16000330
A chronic respiratory disease manifested as difficulty breathing due to the narrowing of bronchial passageways.
DUST PNEUMONOPATHY NEC[accessedResource: ICD9:504][accessDate: 04-11-2010]
GeneRIF:12646606
GeneRIF:11912176
ICD9:493
GeneRIF:12794006
chronic obstructive asthma
GeneRIF:12063521
GeneRIF:11842292
GeneRIF:15853952
Pneumopathy due to inhalation of other dust (disorder)
GeneRIF:11953202
Other forms of asthma[accessedResource: ICD9:493.8][accessDate: 04-11-2010]
SNOMEDCT:266365004
GeneRIF:12789231
GeneRIF:15282199
GeneRIF:12396623
ICD9:493.8
GeneRIF:15201134
Asthma, unspecified type, with acute exacerbation
GeneRIF:14718253
GeneRIF:12045241
GeneRIF:15105161
GeneRIF:14682393
GeneRIF:12091169
GeneRIF:15039137
GeneRIF:15941840
GeneRIF:15478389
GeneRIF:11466392
ICD9:504
GeneRIF:15988535
GeneRIF:15634264
GeneRIF:12594058
GeneRIF:12754192
ICD9:493.9
GeneRIF:16021473
GeneRIF:15073379
GeneRIF:12754510
GeneRIF:12170265
GeneRIF:15148962
GeneRIF:14754534
GeneRIF:15467329
GeneRIF:12626595
Pneumopathy due to inhalation of other dust NOS (disorder)[accessedResource: SNOMEDCT:196015005][accessDate: 04-11-2010]
GeneRIF:11692112
GeneRIF:15131571
GeneRIF:15710598
A bronchial disease that is characterized by chronic inflammation and narrowing of the airways, which is caused by a combination of environmental and genetic factors resulting in recurring periods of wheezing (a whistling sound while breathing), chest tightness, shortness of breath, mucus production and coughing. The symptoms appear due to a variety of triggers such as allergens, irritants, respiratory infections, weather changes, excercise, stress, reflux disease, medications, foods and emotional anxiety.[accessedResource: DOID:2841][accessDate: 04-11-2010]
GeneRIF:12568496
GeneRIF:12730147
JAX:000659
C3H/HeJ is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/000659.html
C3H/HeJ
James Malone
HCC193
James Malone
A mononuclear phagocyte present in variety of tissues, typically differentiated from monocytes, capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells.[accessedResource: CL:0000235][accessDate: 04-11-2010]
histiocyte[accessedResource: CL:0000235][accessDate: 04-11-2010]
BTO:0000801
macrophage
Relatively long-lived phagocytic cell of mammalian tissues, derived from blood monocyte. Macrophages from different sites have distinctly different properties. Main types are peritoneal and alveolar macrophages, tissue macrophages (histiocytes), Kuppfer cells of the liver, and osteoclasts. In response to foreign materials may become stimulated or activated. Macrophages play an important role in killing of some bacteria, protozoa, and tumour cells, release substances that stimulate other cells of the immune system, and are involved in antigen presentation. May further differentiate within chronic inflammatory lesions to epithelioid cells or may fuse to form foreign body giant cells or Langhans' giant cells.
Relatively long-lived phagocytic cell of mammalian tissues, derived from blood monocyte. Macrophages from different sites have distinctly different properties. Main types are peritoneal and alveolar macrophages, tissue macrophages (histiocytes), Kuppfer cells of the liver, and osteoclasts. In response to foreign materials may become stimulated or activated. Macrophages play an important role in killing of some bacteria, protozoa, and tumour cells, release substances that stimulate other cells of the immune system, and are involved in antigen presentation. May further differentiate within chronic inflammatory lesions to epithelioid cells or may fuse to form foreign body giant cells or Langhans' giant cells.[accessedResource: BTO:0000801][accessDate: 04-11-2010]
monocyte-derived macrophage
CL:0000235
macrophagocyte
histiocyte
A mononuclear phagocyte present in variety of tissues, typically differentiated from monocytes, capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells.
A mononuclear phagocyte which differentiates from monocytes, is typically resident in a particular tissue, and capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells (Cell Ontology).[accessedResource: NIFSTD:sao185843373][accessDate: 04-11-2010]
Tomasz Adamusiak
NIFSTD:sao185843373
A mononuclear phagocyte which differentiates from monocytes, is typically resident in a particular tissue, and capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells (Cell Ontology).
James Malone
bone marrow-derived macrophage
macrophagocyte[accessedResource: BTO:0000801][accessDate: 04-11-2010]
1.8
true
obsolete_K562
James Malone
Ele Holloway
duplicate of EFO_0002067 (K562)
http://www.ebi.ac.uk/efo/EFO_0002031
A biexponential transformation is a data transformation that, for each (one dimensional) real number input x, outputs an approximation (found, e.g. with the Newton's method) to a solution y of the equation B(y)-x=0, where B denotes a b transformation.
biexponential transformation
James Malone
CaHPV10
James Malone
Ele Holloway
PO:0004542
BTO:0001181
James Malone
A somewhat elongate usually horizontal subterranean plant stem that is often thickened by deposits of reserve food material, produces shoots above and roots below, and is distinguished from a true root in possessing buds, nodes, and usually scalelike leaves.[accessedResource: BTO:0001181][accessDate: 04-11-2010]
rhizome
A somewhat elongate usually horizontal subterranean plant stem that is often thickened by deposits of reserve food material, produces shoots above and roots below, and is distinguished from a true root in possessing buds, nodes, and usually scalelike leaves.
GRO:0005811[accessedResource: BTO:0001181][accessDate: 04-11-2010]
GRO:0005811
MAT:0000219
FBbt:00005418
A0antEndo
A0antEndo[accessedResource: FBbt:00005418][accessDate: 04-11-2010]
anterior endoderm anlage in statu nascendi
James Malone
NCIt:C28147
embryo early (growth) stage
Embryologic
Embryologic[accessedResource: NCIt:C28147][accessDate: 04-11-2010]
embryo
James Malone
MO_563
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hybridization_chamber
http://www.ebi.ac.uk/efo/EFO_0002019
A container which is used to maintain constant contact of a liquid on an array. This can be either a glass vial or slide.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hybridization_chamber[accessedResource: MO_563][accessDate: 04-11-2010]
hybridization chamber
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158596&type=germplasm
CS57572 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158596&type=germplasm
CS57572
James Malone
DOID:3458
breast adenocarcinoma
James Malone
DMS-79
DMS79
James Malone
Ele Holloway
CCM - Congestive cardiomyopathy
GeneRIF:15833432
GeneRIF:12912811
DCM - Dilated cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 04-11-2010]
GeneRIF:11846417
Cardiomyopathy, Dilated, CMD1A
Primary dilated cardiomyopathy
Congestive cardiomyopathy
SNOMEDCT:399020009
Congestive Cardiomyopathies
GeneRIF:15601645
GeneRIF:14625273
MP:0002795
GeneRIF:15735644
CCM - Congestive cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 04-11-2010]
GeneRIF:14660611
Primary dilated cardiomyopathy[accessedResource: SNOMEDCT:195021004][accessDate: 04-11-2010]
GeneRIF:15146952
Congestive dilated cardiomyopathy
James Malone
Cardiomyopathy, Dilated, LMNA
A form of CARDIAC MUSCLE disease that is characterized by ventricular dilation, VENTRICULAR DYSFUNCTION, and HEART FAILURE. Risk factors include SMOKING; ALCOHOL DRINKING; HYPERTENSION; INFECTION; PREGNANCY; and mutations in the LMNA gene encoding LAMIN TYPE A, a NUCLEAR LAMINA protein.
Dilated Cardiomyopathies[accessedResource: MSH:D002311][accessDate: 04-11-2010]
decreased function of the heart associated with cardiac enlargement and congestive heart failure[accessedResource: MP:0002795][accessDate: 04-11-2010]
GeneRIF:12642359
GeneRIF:12644006
primary dilated cardiomyopathy (disorder)
GeneRIF:12197595
Cardiomyopathy, Dilated, with Conduction Deffect1
primary dilated cardiomyopathy (disorder)[accessedResource: DOID:12930][accessDate: 04-11-2010]
Congestive cardiomyopathy (disorder)[accessedResource: SNOMEDCT:399020009][accessDate: 04-11-2010]
Congestive Cardiomyopathies[accessedResource: MSH:D002311][accessDate: 04-11-2010]
GeneRIF:15080529
GeneRIF:11792810
GeneRIF:11950896
MSH:D002311
GeneRIF:15238456
GeneRIF:15034580
GeneRIF:11984589
COCM - Congestive cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 04-11-2010]
congestive cardiomyopathy[accessedResource: MP:0002795][accessDate: 04-11-2010]
GeneRIF:16288714
GeneRIF:12869376
GeneRIF:12177436
Cardiomyopathy, Familial Idiopathic[accessedResource: MSH:D002311][accessDate: 04-11-2010]
Cardiomyopathies, Dilated
GeneRIF:11897440
Cardiomyopathy, Dilated, CMD1A[accessedResource: MSH:D002311][accessDate: 04-11-2010]
GeneRIF:15340063
SNOMEDCT:195021004
Cardiomyopathies, Familial Idiopathic[accessedResource: MSH:D002311][accessDate: 04-11-2010]
GeneRIF:12072561
GeneRIF:12628721
decreased function of the heart associated with cardiac enlargement and congestive heart failure
Tomasz Adamusiak
Cardiomyopathy, Dilated, LMNA[accessedResource: MSH:D002311][accessDate: 04-11-2010]
Congestive cardiomyopathy (disorder)
DCM - Dilated cardiomyopathy
HP:0001644
GeneRIF:12163370
GeneRIF:15347805
GeneRIF:15485910
GeneRIF:15763499
GeneRIF:12610310
GeneRIF:12359139
GeneRIF:11896212
A form of CARDIAC MUSCLE disease that is characterized by ventricular dilation, VENTRICULAR DYSFUNCTION, and HEART FAILURE. Risk factors include SMOKING; ALCOHOL DRINKING; HYPERTENSION; INFECTION; PREGNANCY; and mutations in the LMNA gene encoding LAMIN TYPE A, a NUCLEAR LAMINA protein.[accessedResource: MSH:D002311][accessDate: 04-11-2010]
dilated cardiomyopathy
Congestive dilated cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 04-11-2010]
Idiopathic Cardiomyopathies, Familial
GeneRIF:14575316
Cardiomyopathy, Dilated, with Conduction Deffect1[accessedResource: MSH:D002311][accessDate: 04-11-2010]
DOID:12930
GeneRIF:12920582
GeneRIF:12628722
COCM - Congestive cardiomyopathy
GeneRIF:11972068
Familial Idiopathic Cardiomyopathy
GeneRIF:15345656
UO:0000047
A derived unit which is a standard measure of the amount of a 2-dimensional flat surface.
http://www.ebi.ac.uk/efo/EFO_0001693
area unit
true
James Malone
An area unit is a derived unit which is a standard measure of the amount of a 2-dimensional flat surface.
Tumor Royale
Plexiform neurofibroma (morphologic abnormality)[accessedResource: SNOMEDCT:41252002][accessDate: 04-11-2010]
GeneRIF:11857752
Plexiform Neurofibromas
Pachydermatoceles[accessedResource: MSH:D018318][accessDate: 04-11-2010]
Elephantiasis Neuromatoses[accessedResource: MSH:D018318][accessDate: 04-11-2010]
An elongated and multinodular neurofibroma, formed when the tumor involves either multiple trunks of a plexus or multiple fascicles of a large nerve, such as the sciatic. Some plexiform neurofibromas resemble a bag of worms, others produce a massive ropy enlargement of the nerve. (Adapted from WHO.)[accessedResource: NCIt:C3797][accessDate: 04-11-2010]
Neurofibromas, Plexiform[accessedResource: MSH:D018318][accessDate: 04-11-2010]
A type of neurofibroma manifesting as a diffuse overgrowth of subcutaneous tissue, usually involving the face, scalp, neck, and chest but occasionally occurring in the abdomen or pelvis. The tumors tend to progress, and may extend along nerve roots to eventually involve the spinal roots and spinal cord. This process is almost always a manifestation of NEUROFIBROMATOSIS 1 (MeSH).[accessedResource: NIFSTD:birnlex_12606][accessDate: 04-11-2010]
A type of neurofibroma manifesting as a diffuse overgrowth of subcutaneous tissue, usually involving the face, scalp, neck, and chest but occasionally occurring in the abdomen or pelvis. The tumors tend to progress, and may extend along nerve roots to eventually involve the spinal roots and spinal cord. This process is almost always a manifestation of NEUROFIBROMATOSIS 1. (From Adams et al., Principles of Neurology, 6th ed, p1016; J Pediatr 1997 Nov;131(5):678-82)[accessedResource: MSH:D018318][accessDate: 04-11-2010]
GeneRIF:12782393
Neuromas, Plexiform[accessedResource: MSH:D018318][accessDate: 04-11-2010]
SNOMEDCT:403818001
A type of neurofibroma manifesting as a diffuse overgrowth of subcutaneous tissue, usually involving the face, scalp, neck, and chest but occasionally occurring in the abdomen or pelvis. The tumors tend to progress, and may extend along nerve roots to eventually involve the spinal roots and spinal cord. This process is almost always a manifestation of NEUROFIBROMATOSIS 1. (From Adams et al., Principles of Neurology, 6th ed, p1016; J Pediatr 1997 Nov;131(5):678-82)
plexiform neurofibroma
Pachydermatocele[accessedResource: NIFSTD:birnlex_12606][accessDate: 04-11-2010]
Tomasz Adamusiak
Elephantiasis Neuromatosis
Elephantiasis Neuromatoses
Plexiform neurofibroma (morphologic abnormality)
Plexiform neurofibroma (disorder)
SNOMEDCT:41252002
Pachydermatoceles
Plexiform Neuroma
A type of neurofibroma manifesting as a diffuse overgrowth of subcutaneous tissue, usually involving the face, scalp, neck, and chest but occasionally occurring in the abdomen or pelvis. The tumors tend to progress, and may extend along nerve roots to eventually involve the spinal roots and spinal cord. This process is almost always a manifestation of NEUROFIBROMATOSIS 1 (MeSH).
Pachydermatocele
Neuroma, Plexiform[accessedResource: MSH:D018318][accessDate: 04-11-2010]
Plexiform neurofibroma (disorder)[accessedResource: SNOMEDCT:403818001][accessDate: 04-11-2010]
Neuromas, Plexiform
Tumor Royale[accessedResource: NIFSTD:birnlex_12606][accessDate: 04-11-2010]
An elongated and multinodular neurofibroma, formed when the tumor involves either multiple trunks of a plexus or multiple fascicles of a large nerve, such as the sciatic. Some plexiform neurofibromas resemble a bag of worms, others produce a massive ropy enlargement of the nerve. (Adapted from WHO.)
NIFSTD:birnlex_12606
James Malone
MSH:D018318
Elephantiasis Neuromatosis[accessedResource: NIFSTD:birnlex_12606][accessDate: 04-11-2010]
DOID:5151
NCIt:C3797
HL-60 cell[accessedResource: BTO:0000738][accessDate: 10-05-2010]
HL60 cell
HL-60 cell
BTO:0000738
obsolete_HL60
HL60 cell[accessedResource: BTO:0000738][accessDate: 10-05-2010]
James Malone
Human acute myeloid leukemia established from the peripheral blood of a 35-year-old woman with acute myeloid leukemia (AML FAB M2) in 1976.
Ele Holloway
duplicate with EFO_0002793
Human acute myeloid leukemia established from the peripheral blood of a 35-year-old woman with acute myeloid leukemia (AML FAB M2) in 1976.[accessedResource: BTO:0000738][accessDate: 10-05-2010]
2.1
HL-60
true
JCRB0815
ABC-1
James Malone
Ele Holloway
HuT78
James Malone
Ele Holloway
tempol
SCaBER
James Malone
Ele Holloway
NCIt:C15421
postmenopausal
James Malone
66cl4
James Malone
Ele Holloway
EHDAA:3694
Organ component of neuraxis that has as its parts the tectum, cerebral peduncle, midbrain tegmentum and cerebral aqueduct. Examples: There is only one midbrain.
ZFA:0000128
The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally.
midbrain
EV:0100242
The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally.[accessedResource: ZFA:0000128][accessDate: 04-11-2010]
SAEL:68
TAO:0000128
FMAID:61993
The middle of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain.
Tomasz Adamusiak
mesencephalon[accessedResource: TAO:0000128][accessDate: 04-11-2010]
The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally. Kimmel et al, 1995.
MFO:0002420
NIFSTD:birnlex_1667
The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally. Kimmel et al, 1995.[accessedResource: TAO:0000128][accessDate: 04-11-2010]
mesencephalon
The middle of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain.[accessedResource: BTO:0000138][accessDate: 04-11-2010]
BTO:0000138
MAT:0000106
XAO:0000014
EMAPA:16974
MA:0000207
James Malone
A549
James Malone
cornea[accessedResource: BTO:0000286][accessDate: 04-11-2010]
The transparent part of the coat of the eyeball that covers the iris and pupil and admits light to the interior.
A dome-shaped, transparent, avascular tissue covering the front of the eye. It is composed of five layers: squamous epithelium, Bowman's membrane, stroma, Descemet's membrane, and endothelium. Refraction of light contributing to eye's focusing ability is its characteristic function. It contains unmyelinated nerve endings which are responsible for the high sensitivity of the tissue.
James Malone
The transparent part of the coat of the eyeball that covers the iris and pupil and admits light to the interior.[accessedResource: BTO:0000286][accessDate: 04-11-2010]
BTO:0000286
cornea structure
A dome-shaped, transparent, avascular tissue covering the front of the eye. It is composed of five layers: squamous epithelium, Bowman's membrane, stroma, Descemet's membrane, and endothelium. Refraction of light contributing to eye's focusing ability is its characteristic function. It contains unmyelinated nerve endings which are responsible for the high sensitivity of the tissue.[accessedResource: NCIt:C12342][accessDate: 04-11-2010]
NCIt:C12342
Cornea
GM07034
James Malone
MO_454
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#in_vivo_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#in_vivo_design[accessedResource: MO_454][accessDate: 04-11-2010]
in vivo design
Tomasz Adamusiak
MKN-1 cell
MKN1
MKN-1
Human gastric adenosquamous carcinoma cell line.
Human gastric adenosquamous carcinoma cell line.[accessedResource: BTO:0002384][accessDate: 04-11-2010]
James Malone
MKN1 cell
MKN1 cell[accessedResource: BTO:0002384][accessDate: 04-11-2010]
JCRB0252
MKN-1 cell[accessedResource: BTO:0002384][accessDate: 04-11-2010]
Ele Holloway
BTO:0002384
H2279
NCI-H2279
James Malone
CHEBI:26764
hormone steroide
hormona esteroide
Any steroid that act as hormone.
hormones steroides
Steroidhormone
http://www.ebi.ac.uk/efo/EFO_0001614
hormonas esteroideas
steroid hormones
Steroidhormon
steroid hormone
perchloride of mercury
InChIKey=LWJROJCJINYWOX-ZZJRNXLTCY
ClHgCl
mercury dichloride
dichlorure de mercure
chlorure mercurique
corrosive sublimate
mercury(II) chloride
A white powder or crystalline solid made up of linear triatomic molecules in which a mercury atom is bonded to two chlorines. Water-soluble, it is highly toxic. Once used in a wide variety of applications, including preserving wood and anatomical specimens, embalming and disinfecting, as an intensifier in photography, as a mordant for rabbit and beaver furs, and freeing gold from lead, its use has markedly declined as less toxic alternatives have been developed.
CHEBI:31823
James Malone
InChI=1/2ClH.Hg/h2*1H;/q;;+2/p-2/f2Cl.Hg/h2*1h;/q2*-1;m
mercury(2+) chloride
A mercury coordination entity that has formula Cl2Hg.
mercuric bichloride
Mercuric chloride
mercury perchloride
bichlorure de mercure
hydrargyrum bichloratum
HgCl2
corrosive mercury chloride
Cl2Hg
Quecksilber(II)-chlorid
Sulema
Sublimat
Cl[Hg]Cl
http://www.ebi.ac.uk/efo/EFO_0001671
mercury bichloride
dichloromercury
sublimate
Increased pressure in the eyeball due to obstruction of the outflow of aqueous humor.
GeneRIF:15342693
GeneRIF:12655282
Glaucoma associated with other ocular disorders NOS[accessedResource: SNOMEDCT:193565002][accessDate: 04-11-2010]
DOID:1686
Unspecified glaucoma
Other specified forms of glaucoma (disorder)[accessedResource: SNOMEDCT:193566001][accessDate: 04-11-2010]
GeneRIF:12687498
SNOMEDCT:23986001
GeneRIF:12073024
Glaucoma associated with other ocular disorders NOS (disorder)
Glaucoma associated with other ocular disorders NOS
GeneRIF:15723004
GeneRIF:16043855
GeneRIF:15579465
GeneRIF:14725620
SNOMEDCT:193559002
Glaucoma associated with other ocular disorders[accessedResource: ICD9:365.6][accessDate: 04-11-2010]
Other specified glaucoma NOS (disorder)
GLAUCOMA NOS[accessedResource: ICD9:365.9][accessDate: 04-11-2010]
GeneRIF:15823921
Glaucoma NOS (disorder)
GeneRIF:15509533
Other specified glaucoma NOS (disorder)[accessedResource: SNOMEDCT:193568000][accessDate: 04-11-2010]
ICD9:365.8
James Malone
GeneRIF:15557444
Glaucoma (disorder)[accessedResource: SNOMEDCT:23986001][accessDate: 04-11-2010]
GeneRIF:12676895
Increased pressure in the eyeball due to obstruction of the outflow of aqueous humor.[accessedResource: NCIt:C26782][accessDate: 04-11-2010]
GeneRIF:12060848
Glaucoma associated with other ocular disorders (disorder)[accessedResource: SNOMEDCT:193559002][accessDate: 04-11-2010]
GeneRIF:16103353
Other specified forms of glaucoma[accessedResource: SNOMEDCT:193566001][accessDate: 04-11-2010]
Other specified forms of glaucoma
GeneRIF:15498064
GeneRIF:12789547
ICD9:365.6
NCIt:C26782
GeneRIF:11774072
Other specified glaucoma
GeneRIF:12811537
GeneRIF:12828935
GeneRIF:14740993
GLAUCOMA NEC
GeneRIF:11910561
ICD9:365.9
GeneRIF:15638362
Other specified forms of glaucoma (disorder)
Other specified glaucoma NOS[accessedResource: SNOMEDCT:193568000][accessDate: 04-11-2010]
SNOMEDCT:193566001
Glaucoma associated with other ocular disorders (disorder)
GeneRIF:15895394
GeneRIF:15326130
glaucoma
GeneRIF:12920093
Glaucoma associated with other ocular disorders
SNOMEDCT:193565002
Glaucoma NOS (disorder)[accessedResource: SNOMEDCT:193569008][accessDate: 04-11-2010]
GeneRIF:15304601
Unspecified glaucoma[accessedResource: ICD9:365.9][accessDate: 04-11-2010]
GLAUCOMA NEC[accessedResource: ICD9:365.89][accessDate: 04-11-2010]
ICD9:365
GeneRIF:15519534
Other specified glaucoma NOS
Glaucoma associated with other ocular disorders NOS (disorder)[accessedResource: SNOMEDCT:193565002][accessDate: 04-11-2010]
SNOMEDCT:193568000
GeneRIF:15677485
Glaucoma NOS
Glaucoma (disorder)
Other specified glaucoma[accessedResource: ICD9:365.89][accessDate: 04-11-2010]
SNOMEDCT:193569008
GeneRIF:15370540
ICD9:365.89
C33A
James Malone
Ele Holloway
MSH:D002282
Carcinoma, Alveolar[accessedResource: MSH:D002282][accessDate: 04-11-2010]
Bronchioalveolar Lung Carcinoma[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Bronchioloalveolar carcinoma
Alveolar adenocarcinoma (morphologic abnormality)
Bronchioloalveolar carcinoma - disorder
Bronchiolo-Alveolar Carcinoma of Lung
Adenocarcinomas, Alveolar
Bronchiolo-Alveolar Carcinoma
Bronchioloalveolar Adenocarcinoma of the Lung[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
[M]Bronchiolo-alveolar adenocarcinoma
Bronchioloalveolar Lung Adenocarcinoma
Bronchiolo-Alveolar Lung Carcinoma[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Bronchiolar Carcinoma
A carcinoma thought to be derived from epithelium of terminal bronchioles, in which the neoplastic tissue extends along the alveolar walls and grows in small masses within the alveoli. Involvement may be uniformly diffuse and massive, or nodular, or lobular. The neoplastic cells are cuboidal or columnar and form papillary structures. Mucin may be demonstrated in some of the cells and in the material in the alveoli, which also includes denuded cells. Metastases in regional lymph nodes, and in even more distant sites, are known to occur, but are infrequent. (From Stedman, 25th ed)
Carcinomas, Bronchiolar[accessedResource: MSH:D002282][accessDate: 04-11-2010]
Carcinomas, Bronchioloalveolar
Carcinomas, Bronchioloalveolar[accessedResource: MSH:D002282][accessDate: 04-11-2010]
Bronchioloalveolar adenocarcinoma
SNOMEDCT:373627005
Alveolar cell carcinoma[accessedResource: SNOMEDCT:112677002][accessDate: 04-11-2010]
Adenocarcinomas, Bronchiolo-Alveolar[accessedResource: MSH:D002282][accessDate: 04-11-2010]
SNOMEDCT:112677002
Carcinomas, Bronchiolar
Bronchiolo-Alveolar Adenocarcinoma[accessedResource: MSH:D002282][accessDate: 04-11-2010]
NCIt:C2923
Bronchiolo-Alveolar Lung Carcinoma
Bronchiolo-Alveolar Carcinoma of the Lung
BAC
Bronchioloalveolar Adenocarcinoma of Lung
Bronchioalveolar Adenocarcinoma of Lung
James Malone
Bronchiolo-Alveolar Adenocarcinomas
Bronchioalveolar Lung Carcinoma
Adenocarcinomas, Alveolar[accessedResource: MSH:D002282][accessDate: 04-11-2010]
Bronchioloalveolar carcinoma (disorder)[accessedResource: DOID:4926][accessDate: 04-11-2010]
Adenocarcinoma, Bronchiolo Alveolar
Alveolar Adenocarcinoma[accessedResource: MSH:D002282][accessDate: 04-11-2010]
Bronchioloalveolar Lung Adenocarcinoma[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Bronchioloalveolar Adenocarcinoma of Lung[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Bronchioalveolar Adenocarcinoma of Lung[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Bronchioloalveolar adenocarcinoma[accessedResource: DOID:4926][accessDate: 04-11-2010]
BAC[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Alveolar adenocarcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:36310008][accessDate: 04-11-2010]
Bronchioalveolar Adenocarcinoma of the Lung[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
A carcinoma thought to be derived from epithelium of terminal bronchioles, in which the neoplastic tissue extends along the alveolar walls and grows in small masses within the alveoli. Involvement may be uniformly diffuse and massive, or nodular, or lobular. The neoplastic cells are cuboidal or columnar and form papillary structures. Mucin may be demonstrated in some of the cells and in the material in the alveoli, which also includes denuded cells. Metastases in regional lymph nodes, and in even more distant sites, are known to occur, but are infrequent. (From Stedman, 25th ed)[accessedResource: MSH:D002282][accessDate: 04-11-2010]
Carcinomas, Alveolar
Alveolar cell carcinoma
bronchoalveolar adenocarcinoma
Alveolar Carcinomas[accessedResource: MSH:D002282][accessDate: 04-11-2010]
Bronchiolo-Alveolar Carcinoma of Lung[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Bronchiolo-Alveolar Carcinomas
A well or moderately differentiated morphologic variant of lung adenocarcinoma characterized by tumor growth along the alveolar structures without stromal, vascular, or pleural invasion.[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Bronchiolar carcinoma[accessedResource: SNOMEDCT:373627005][accessDate: 04-11-2010]
A well or moderately differentiated morphologic variant of lung adenocarcinoma characterized by tumor growth along the alveolar structures without stromal, vascular, or pleural invasion.
Bronchioloalveolar Adenocarcinoma of the Lung
DOID:4926
Bronchiolo-alveolar carcinoma[accessedResource: SNOMEDCT:112677002][accessDate: 04-11-2010]
Bronchiolar adenocarcinoma[accessedResource: SNOMEDCT:373627005][accessDate: 04-11-2010]
Bronchiolo-Alveolar Carcinomas[accessedResource: MSH:D002282][accessDate: 04-11-2010]
[M]Bronchiolo-alveolar adenocarcinoma[accessedResource: SNOMEDCT:112677002][accessDate: 04-11-2010]
Bronchioalveolar Adenocarcinoma of the Lung
Bronchiolo-alveolar adenocarcinoma (morphologic abnormality)[accessedResource: DOID:4926][accessDate: 04-11-2010]
Bronchiolo-Alveolar Carcinoma of the Lung[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Alveolar Carcinoma
Adenocarcinoma, Alveolar
Carcinoma, Bronchioloalveolar[accessedResource: MSH:D002282][accessDate: 04-11-2010]
Bronchiolo-alveolar adenocarcinoma (morphologic abnormality)
SNOMEDCT:36310008
Bronchiolar adenocarcinoma
EMF-19
EFM19
James Malone
Ele Holloway
http://jaxmice.jax.org/strain/009257.html
PMID:15457343
The ILSXISS#/Tej recombinant inbred (RI) strains originate from crosses between ILS/IbgTejJ (009324) and ISS/IbgTejJ (009325) They may be used to study the genetics of neurogenetic, neuropharmacological and behavioral phenotypes involved in alcohol-related traits and complex or potentially complex physiologic phenotypes (including differences in longevity under ad libitum and dietary restriction conditions, aging, body temperature and body weight).
ILSXISS#/Tej
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311941
CS57520 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311941
CS57520
James Malone
293T
James Malone
The EAhy 926 cell is a hybridoma line derived from human endothelium and A549/8 cells. They display stable endothelial characteristics and may provide an indication of how endothelial cells respond to photodynamic therapy.[accessedResource: BTO:0000396][accessDate: 04-11-2010]
EA.hy926 cell[accessedResource: BTO:0000396][accessDate: 04-11-2010]
EAhy 926 cell
The EAhy 926 cell is a hybridoma line derived from human endothelium and A549/8 cells. They display stable endothelial characteristics and may provide an indication of how endothelial cells respond to photodynamic therapy.
BTO:0000396
EA.hy926 cell
Tomasz Adamusiak
PC-14
James Malone
Ele Holloway
C6H11NOS2
CS(=O)CCCCN=C=S
http://www.ebi.ac.uk/efo/EFO_0001617
InChIKey=SUVMJBTUFCVSAD-UHFFFAOYAY
sulforaphane
CHEBI:47807
InChI=1/C6H11NOS2/c1-10(8)5-3-2-4-7-6-9/h2-5H2,1H3
1-isothiocyanato-4-(methylsulfinyl)butane
4-isothiocyanatobutyl methyl sulfoxide
A sulfoxide that has formula C6H11NOS2.
Sulforafan
A motility assay is an assay which measures the controlled movement of a population of cells.
motility assay
James Malone
Flora Logan
NCIt:C33073
A lymph node located in the mediastinum. Mediastinal lymph nodes are arranged in three groups, one on the lateral, another on the medial, and a third on the anterior aspect of the vessels; the third group is, however, sometimes absent.
A lymph node located in the mediastinum. Mediastinal lymph nodes are arranged in three groups, one on the lateral, another on the medial, and a third on the anterior aspect of the vessels; the third group is, however, sometimes absent.[accessedResource: NCIt:C33073][accessDate: 04-11-2010]
mediastinal lymph node
James Malone
Pancreas Excision[accessedResource: NCIt:C15294][accessDate: 04-11-2010]
Surgical removal of part or all of the pancreas.[accessedResource: NCIt:C15294][accessDate: 04-11-2010]
NCIt:C15294
Jie Zheng
Pancreas Excision
Tomasz Adamusiak
pancreatectomy
Surgical removal of part or all of the pancreas.
Excision of the Pancreas[accessedResource: NCIt:C15294][accessDate: 04-11-2010]
Excision of the Pancreas
MA:0001067
inferior colliculus
James Malone
Ele Holloway
SJRH30
James Malone
Ele Holloway
The female reproductive part of a flower, consisting of stigma, style, and ovary.[accessedResource: BTO:0000072][accessDate: 04-11-2010]
carpel
PO:0009030
James Malone
GRO:0005441[accessedResource: BTO:0000072][accessDate: 04-11-2010]
GRO:0005441
pistil[accessedResource: BTO:0000072][accessDate: 04-11-2010]
MAT:0000516
BTO:0000072
pistil
The female reproductive part of a flower, consisting of stigma, style, and ovary.
The process of applying a solvent (e.g. water) or some solution (e.g. SSC/SDS) to a BioMaterial or an array to remove impurities or unwanted compounds.
washing
James Malone
vulva sarcoma
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#candela[accessedResource: MO_572][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#candela
MO_572
A luminous intensity unit which equal to the luminous intensity, in a given direction, of a source that emits monochromatic radiation of frequency 540 x 1012 hertz and that has a radiant intensity in that direction of 1/683 watt per steradian.
A candela is a luminous intensity unit which equal to the luminous intensity, in a given direction, of a source that emits monochromatic radiation of frequency 540 x 1012 hertz and that has a radiant intensity in that direction of 1/683 watt per steradian.
http://www.ebi.ac.uk/efo/EFO_0001691
James Malone
Jie Zheng
cd
candela
Tomasz Adamusiak
true
http://www.arabidopsis.org/servlets/TairObject?id=1005158836&type=germplasm
CS57812 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158836&type=germplasm
CS57812
James Malone
(Deoxyribonucleotide)n+m
A deoxyribonucleotide polymer that is the primary genetic material of all cells. Eukaryotic and prokaryotic organisms normally contain DNA in a double-stranded state, yet several important biological processes transiently involve single-stranded regions. DNA, which consists of a polysugar-phosphate backbone possessing projections of purines (adenine and guanine) and pyrimidines (thymine and cytosine), forms a double helix that is held together by hydrogen bonds between these purines and pyrimidines (adenine to thymine and guanine to cytosine) (MSH).[accessedResource: NIFSTD:sao454034570][accessDate: 04-11-2010]
DNAn+1
High molecular weight, linear polymers, composed of nucleotides containing deoxyribose and linked by phosphodiester bonds; DNA contain the genetic information of organisms.
NIFSTD:sao454034570
deoxyribonucleic acids
Desoxyribonukleinsaeure
Deoxyribonucleic acid[accessedResource: NIFSTD:sao454034570][accessDate: 04-11-2010]
James Malone
DNS
Tomasz Adamusiak
(Deoxyribonucleotide)n
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001453
(Deoxyribonucleotide)m
thymus nucleic acid
deoxyribonucleic acid
A deoxyribonucleotide polymer that is the primary genetic material of all cells. Eukaryotic and prokaryotic organisms normally contain DNA in a double-stranded state, yet several important biological processes transiently involve single-stranded regions. DNA, which consists of a polysugar-phosphate backbone possessing projections of purines (adenine and guanine) and pyrimidines (thymine and cytosine), forms a double helix that is held together by hydrogen bonds between these purines and pyrimidines (adenine to thymine and guanine to cytosine) (MSH).
DNA
DNA is a chemical compound which has a high molecular weight, linear polymers and is composed of nucleotides containing deoxyribose and linked by phosphodiester bonds; DNA contains the genetic information of organisms.
MO_945
DNAn
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#DNA[accessedResource: MO_945][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#DNA
desoxyribose nucleic acid
BG02ES is a cell line dervied from human embryonic stem cells.
BG02ES
James Malone
BG02
GeneRIF:15502806
An anaplastic, highly malignant, and usually bronchogenic carcinoma composed of small ovoid cells with scanty neoplasm. It is characterized by a dominant, deeply basophilic nucleus, and absent or indistinct nucleoli. (From Stedman, 25th ed; Holland et al., Cancer Medicine, 3d ed, p1286-7)[accessedResource: MSH:D018288][accessDate: 04-11-2010]
Small Cell Neuroendocrine Carcinoma of Lung
GeneRIF:15217946
GeneRIF:15864740
A highly aggressive subtype of lung carcinoma characterized by the presence of malignant small cells and necrosis. Metastatic disease is usually present at the time of diagnosis.
SNOMEDCT:254633006
A highly aggressive subtype of lung carcinoma characterized by the presence of malignant small cells and necrosis. Metastatic disease is usually present at the time of diagnosis.[accessedResource: NCIt:C4917][accessDate: 04-11-2010]
Oat cell carcinoma of lung (disorder)
GeneRIF:12079519
GeneRIF:15514966
GeneRIF:15806155
GeneRIF:12555074
SCLC - Small cell lung cancer
GeneRIF:11804687
GeneRIF:15112277
GeneRIF:14560006
GeneRIF:11839685
GeneRIF:16222316
Small cell lung cancer
Small Cell Carcinoma of Lung
Carcinoma, Oat Cell
A highly aggressive subtype of lung carcinoma characterized by the presence of malignant small cells and necrosis. Metastatic disease is usually present at the time of diagnosis. (NCI05)
GeneRIF:12792791
GeneRIF:14592434
small cell carcinoma of lung (disorder)
GeneRIF:12579323
GeneRIF:12177731
GeneRIF:14672915
GeneRIF:16125276
Small Cell Carcinoma of the Lung
GeneRIF:12569360
Carcinomas, Small Cell[accessedResource: MSH:D018288][accessDate: 04-11-2010]
SCLC
GeneRIF:16077988
GeneRIF:16242000
GeneRIF:12356726
GeneRIF:16226111
GeneRIF:11782387
GeneRIF:12629521
GeneRIF:12611639
SNOMEDCT:254632001
GeneRIF:15205330
Carcinomas, Oat Cell
GeneRIF:15942654
GeneRIF:12605092
Lung Small Cell Neuroendocrine Carcinoma[accessedResource: NCIt:C4917][accessDate: 04-11-2010]
Oat Cell Carcinoma of the Lung[accessedResource: NCIt:C4917][accessDate: 04-11-2010]
Carcinoma, Oat Cell[accessedResource: MSH:D018288][accessDate: 04-11-2010]
Carcinoma, Small Cell
GeneRIF:12767512
small cell neuroendocrine carcinoma of lung[accessedResource: DOID:5409][accessDate: 04-11-2010]
Lung Small Cell Neuroendocrine Carcinoma
GeneRIF:15184245
GeneRIF:15387368
GeneRIF:15671551
GeneRIF:16140931
Carcinomas, Oat Cell[accessedResource: MSH:D018288][accessDate: 04-11-2010]
GeneRIF:12474049
SCLC[accessedResource: DOID:5409][accessDate: 04-11-2010]
GeneRIF:14614010
SCLC - Small cell lung cancer[accessedResource: SNOMEDCT:254632001][accessDate: 04-11-2010]
Small Cell Neuroendocrine Carcinoma of the Lung[accessedResource: NCIt:C4917][accessDate: 04-11-2010]
Oat Cell Carcinoma of the Lung
GeneRIF:14507113
GeneRIF:14515059
GeneRIF:12393872
Small Cell Neuroendocrine Carcinoma of the Lung
GeneRIF:12636057
small cell carcinoma of lung (disorder)[accessedResource: DOID:5409][accessDate: 04-11-2010]
DOID:5409
GeneRIF:15279903
GeneRIF:14661059
An anaplastic, highly malignant, and usually bronchogenic carcinoma composed of small ovoid cells with scanty neoplasm. It is characterized by a dominant, deeply basophilic nucleus, and absent or indistinct nucleoli. (From Stedman, 25th ed; Holland et al., Cancer Medicine, 3d ed, p1286-7)
Small cell lung cancer[accessedResource: SNOMEDCT:254632001][accessDate: 04-11-2010]
Carcinoma, Small Cell[accessedResource: MSH:D018288][accessDate: 04-11-2010]
GeneRIF:11948117
GeneRIF:14758730
GeneRIF:15041716
small cell carcinoma of lung[accessedResource: DOID:5409][accessDate: 04-11-2010]
Carcinomas, Small Cell
GeneRIF:15870700
GeneRIF:12796027
small cell lung carcinoma
Oat cell carcinoma of lung
GeneRIF:14997382
GeneRIF:12499091
GeneRIF:12001123
GeneRIF:12432558
GeneRIF:11836568
Small Cell Carcinoma of the Lung[accessedResource: NCIt:C4917][accessDate: 04-11-2010]
Oat Cell Lung Carcinoma[accessedResource: NCIt:C4917][accessDate: 04-11-2010]
GeneRIF:11955647
GeneRIF:12771999
NCIt:C4917
GeneRIF:15709164
Oat cell carcinoma of lung[accessedResource: SNOMEDCT:254633006][accessDate: 04-11-2010]
Oat cell carcinoma of lung (disorder)[accessedResource: DOID:5409][accessDate: 04-11-2010]
GeneRIF:15623596
MSH:D018288
GeneRIF:16115696
GeneRIF:12820319
GeneRIF:16052521
GeneRIF:12684632
James Malone
GeneRIF:15205342
GeneRIF:12820318
GeneRIF:16103065
Oat Cell Lung Carcinoma
GeneRIF:15026553
GeneRIF:12700635
GeneRIF:12757855
GeneRIF:12591723
HCC2157
James Malone
NIFSTD:birnlex_174
James Malone
Tomasz Adamusiak
129S6/SvEvTac
http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
129S6 is a substrain of the mouse strain 129 as described in Jackson Laboratory http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
129S6
129S6/SvEvTac[accessedResource: NIFSTD:birnlex_174][accessDate: 04-11-2010]
EHDAA:8677
James Malone
EMAPA:18248
Lymph node[accessedResource: FMAID:5034][accessDate: 04-11-2010]
MA:0000139
FMAID:5034
Lymph node
SAEL:63
lymphatic system
FMAID:7203
excretory canal
AAO:0000250
MAT:0000119
metanephros[accessedResource: MAT:0000119][accessDate: 04-11-2010]
metanephros
EMAPA:17373
SAEL:57
excretory canal[accessedResource: MAT:0000119][accessDate: 04-11-2010]
MA:0000368
EV:0100096
1: One of a pair of vertebrate organs situated in the body cavity near the spinal column that excrete waste products of metabolism, in humans are bean-shaped organs about 4 1/2 inches (11 1/2 centimeters) long lying behind the peritoneum in a mass of fatty tissue, and consist chiefly of nephrons by which urine is secreted, collected, and discharged into a main cavity whence it is conveyed by the ureter to the bladder.n2: Any of various excretory organs of invertebrate animals.[accessedResource: BTO:0000671][accessDate: 04-11-2010]
kidney
EHDAA:5911
1: One of a pair of vertebrate organs situated in the body cavity near the spinal column that excrete waste products of metabolism, in humans are bean-shaped organs about 4 1/2 inches (11 1/2 centimeters) long lying behind the peritoneum in a mass of fatty tissue, and consist chiefly of nephrons by which urine is secreted, collected, and discharged into a main cavity whence it is conveyed by the ureter to the bladder.n2: Any of various excretory organs of invertebrate animals.
WBbt:0005775
James Malone
BTO:0000671
H157
NCI-H157
James Malone
A blood cell especially of an invertebrate animal.
BTO:0000571
hemocyte
haemocyte[accessedResource: BTO:0000571][accessDate: 04-11-2010]
CL:0000387
Tomasz Adamusiak
haemocyte
hemocyte (sensu Nematoda and Protostomia)[accessedResource: CL:0000387][accessDate: 04-11-2010]
hemocyte (sensu Nematoda and Protostomia)
A blood cell especially of an invertebrate animal.[accessedResource: BTO:0000571][accessDate: 04-11-2010]
1.8
true
obsolete_BY4741
James Malone
Duplicate use EFO_0000099
histology
Microscopic morphology of tissues.
morphology
James Malone
human herpesvirus 8
HHV8
KSHV
HHV-8
KSHV[accessedResource: NCIt:C14327][accessDate: 04-11-2010]
HHV-8[accessedResource: NCIt:C14327][accessDate: 04-11-2010]
Kaposi Sarcoma-Associated Herpes Virus
Ele Holloway
A gammaherpesvirus that contributes to the development of Kaposi sarcoma.[accessedResource: NCIt:C14327][accessDate: 04-11-2010]
A gammaherpesvirus that contributes to the development of Kaposi sarcoma.
HHV8[accessedResource: NCIt:C14327][accessDate: 04-11-2010]
Virus-HHV8
Kaposi Sarcoma Herpes Virus
Tomasz Adamusiak
Kaposi Sarcoma-Associated Herpes Virus[accessedResource: NCIt:C14327][accessDate: 04-11-2010]
Virus-HHV8[accessedResource: NCIt:C14327][accessDate: 04-11-2010]
NCIt:C14327
Kaposi Sarcoma Herpes Virus[accessedResource: NCIt:C14327][accessDate: 04-11-2010]
fibroblast derived cell line
A 1205 lu is a cell line.
A 1205 lu is both something that is bearer of a melanoma, and something that derives from a homo sapiens.
Natural Language Generator 8th April 2010
1205-Lu
James Malone
Ele Holloway
Tomasz Adamusiak
erythrocytic schizont stage
The stage of a sporozoan cell that reproduces by schizogony, producing a varied number of daughter trophozoites or merozoites.[accessedResource: IDOMAL:0000306][accessDate: 04-11-2010]
A sporozoan cell that reproduces by schizogony, producing a varied number of daughter trophozoites or merozoites.
Jie Zheng
The stage of a sporozoan cell that reproduces by schizogony, producing a varied number of daughter trophozoites or merozoites.
erythrocytic schizont
erythrocytic schizont stage[accessedResource: IDOMAL:0000306][accessDate: 04-11-2010]
IDOMAL:0000306
true
PERSON: James Malone
fm
femtometre
A femtometer is a length unit which is equal to 1m x 10^-15.
femtometer
James Malone
MO_676
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#DNA_sequencer
http://www.ebi.ac.uk/efo/EFO_0002015
A DNA sequencer is an instrument that determines the order of deoxynucleotides in deoxyribonucleic acid sequences.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#DNA_sequencer[accessedResource: MO_676][accessDate: 04-11-2010]
DNA sequencer
Cobalamin deficiency[accessedResource: SNOMEDCT:190634004][accessDate: 04-11-2010]
Deficiency of vitamin B>12< (disorder)
Vitamin B 12 Deficiency
James Malone
deficiency of vitamin B>12< (disorder)[accessedResource: DOID:8459][accessDate: 04-11-2010]
Cobalamin deficiency
VITAMIN B12 DEFIC[accessedResource: MSH:D014806][accessDate: 04-11-2010]
Deficiency of vitamin B12[accessedResource: SNOMEDCT:190634004][accessDate: 04-11-2010]
VITAMIN B A 12 DEFICIENCY[accessedResource: MSH:D014806][accessDate: 04-11-2010]
VITAMIN B A 12 DEFICIENCY
DEFIC VITAMIN B 12
Vitamin B12 Deficiencies
DOID:8459
Deficiency of vitamin B>12<
VITAMIN B 12 DEFIC[accessedResource: MSH:D014806][accessDate: 04-11-2010]
A nutritional condition produced by a deficiency of VITAMIN B 12 in the diet, characterized by megaloblastic anemia. Since vitamin B 12 is not present in plants, humans have obtained their supply from animal products, from multivitamin supplements in the form of pills, and as additives to food preparations. A wide variety of neuropsychiatric abnormalities is also seen in vitamin B 12 deficiency and appears to be due to an undefined defect involving myelin synthesis. (From Cecil Textbook of Medicine, 19th ed, p848)
Deficiency of vitamin B<sub>12</sub>
Deficiency of vitamin B>12<[accessedResource: SNOMEDCT:190634004][accessDate: 04-11-2010]
Cobalamin deficiency (disorder)
Deficiency, Vitamin B 12[accessedResource: MSH:D014806][accessDate: 04-11-2010]
VITAMIN B12 DEFIC
Deficiency of vitamin B<sub>12</sub>[accessedResource: SNOMEDCT:190634004][accessDate: 04-11-2010]
Cobalamin deficiency (disorder)[accessedResource: DOID:8459][accessDate: 04-11-2010]
vitamin B12 deficiency
Deficiency of vitamin B12
Deficiencies, Vitamin B12[accessedResource: MSH:D014806][accessDate: 04-11-2010]
A nutritional condition produced by a deficiency of VITAMIN B 12 in the diet, characterized by megaloblastic anemia. Since vitamin B 12 is not present in plants, humans have obtained their supply from animal products, from multivitamin supplements in the form of pills, and as additives to food preparations. A wide variety of neuropsychiatric abnormalities is also seen in vitamin B 12 deficiency and appears to be due to an undefined defect involving myelin synthesis. (From Cecil Textbook of Medicine, 19th ed, p848)[accessedResource: MSH:D014806][accessDate: 04-11-2010]
SNOMEDCT:190634004
MSH:D014806
Tiny blood vessels that connect the arterioles with the venules.
A capillary tube; especially: any of the smallest blood vessels connecting arterioles with venules and forming networks throughout the body.[accessedResource: BTO:0002045][accessDate: 04-11-2010]
BTO:0002045
capillary
James Malone
NCIt:C12685
A capillary tube; especially: any of the smallest blood vessels connecting arterioles with venules and forming networks throughout the body.
Tiny blood vessels that connect the arterioles with the venules.[accessedResource: NCIt:C12685][accessDate: 04-11-2010]
The tissue that lines the wall of the thoracic cavity and the surface of the lungs.[accessedResource: NCIt:C12469][accessDate: 04-11-2010]
The delicate serous membrane that lines each half of the thorax of mammals and is folded back over the surface of the lung of the same side.[accessedResource: BTO:0001791][accessDate: 04-11-2010]
The tissue that lines the wall of the thoracic cavity and the surface of the lungs.
The delicate serous membrane that lines each half of the thorax of mammals and is folded back over the surface of the lung of the same side.
Pleural Tissue
Pleural Tissue[accessedResource: NCIt:C12469][accessDate: 04-11-2010]
James Malone
BTO:0001791
pleura
NCIt:C12469
2102ep is an embryonal cell line
2102Ep
MAT:0000492
right arm
Right is a geometric modifier describing something which is to the right of the median of an organism or organism part, for example right arm.
right
James Malone
pollen
BTO:0000124
PO:0020048
CL:0000252
pollen[accessedResource: CL:0000252][accessDate: 04-11-2010]
microspore
James Malone
A haploid (1n) spore developing into a male gametophyte in heterosporous plants; the uninucleate pollen grain in seed plants.
Tomasz Adamusiak
MAT:0000215
A haploid (1n) spore developing into a male gametophyte in heterosporous plants; the uninucleate pollen grain in seed plants.[accessedResource: CL:0000252][accessDate: 04-11-2010]
Haploid cells produced by meiosis in the anthers of angiosperms; four microspores are produced from a single microsporocyte.
Haploid cells produced by meiosis in the anthers of angiosperms; four microspores are produced from a single microsporocyte.[accessedResource: BTO:0000124][accessDate: 04-11-2010]
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311984
CS57563 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311984
CS57563
James Malone
BTO:0000392
plasma cell
A terminally differentiated cell of the B lymphocyte lineage that produces antibodies; plasma cells are oval or round with extensive rough endoplasmic reticulum, a well-developed Golgi apparatus, and a round nucleus having a characteristic cartwheel heterochromatin pattern.
plasmocyte[accessedResource: BTO:0000392][accessDate: 04-11-2010]
A terminally differentiated cell of the B lymphocyte lineage that produces antibodies; plasma cells are oval or round with extensive rough endoplasmic reticulum, a well-developed Golgi apparatus, and a round nucleus having a characteristic cartwheel heterochromatin pattern.[accessedResource: BTO:0000392][accessDate: 04-11-2010]
A terminally differentiated, post-mitotic, antibody secreting cell of the B cell lineage with the phenotype CD138-positive, surface immunonoglobulin-negative, and MHC Class II-negative. Plasma cells are oval or round with extensive rough endoplasmic reticulum, a well-developed Golgi apparatus, and a round nucleus having a characteristic cartwheel heterochromatin pattern and are devoted to producing large amounts of immunoglobulin.
CL:0000786
plasmacyte
James Malone
A terminally differentiated, post-mitotic, antibody secreting cell of the B cell lineage with the phenotype CD138-positive, surface immunonoglobulin-negative, and MHC Class II-negative. Plasma cells are oval or round with extensive rough endoplasmic reticulum, a well-developed Golgi apparatus, and a round nucleus having a characteristic cartwheel heterochromatin pattern and are devoted to producing large amounts of immunoglobulin.[accessedResource: CL:0000786][accessDate: 04-11-2010]
plasmacyte[accessedResource: BTO:0000392][accessDate: 04-11-2010]
plasmocyte
obsolete platform because the distinction between instrument and platform is very fuzzy
true
The specific version (such as manufacturer, model, etc.) of a technology that is used to carry out a laboratory or computational experiment.
obsolete_platform
SHP77
James Malone
Ele Holloway
abdominal cavity
adult abdomen
EV:0100011
The third large region of the insect body, which originally comprised twelve segments, each segment is usually formed by a dorsal tergite and a ventral sternite and carries on both sides a spiracle, sometimes, both the dorsal and the ventral plates are further subdivided to give rise to latero-tergites and latero-sternites. In the context of Drosophila refers to the most posterior of the three main tagmata or divisions of the body plan, after the head and the thorax.
The third, posterior division (tagma) of the insect body. In adult mosquitoes, consisting of ten apparent segments.[accessedResource: TGMA:0000524][accessDate: 04-11-2010]
abdomen
abdominal cavity[accessedResource: BTO:0000020][accessDate: 04-11-2010]
The third, posterior division (tagma) of the insect body. In adult mosquitoes, consisting of ten apparent segments.
The most posterior of the three tagma (FBbt:00000002).
Abdominopelvis
BTO:0000020
SAEL:1
Subdivision of trunk proper, which is demarcated from the thorax internally by the inferior surface of the sternocostal part of the diaphragm and externally by the costal margin, from the back of abdomen by the external surface of the posterior abdominal wall, from the perineum by the superior surface of the urogenital diaphragm and from the lower limbs by the inguinal folds; together with the thorax, and perineum, it constitutes the trunk proper. Examples: There is only one abdomen.
1: The part of the body between the thorax and the pelvis; also: the cavity of this part of the trunk containing the chief viscera.n2: The posterior section of the body behind the thorax in an arthropod.
The most posterior of the three tagma (FBbt:00000002).[accessedResource: FBbt:00000020][accessDate: 04-11-2010]
adult abdomen[accessedResource: TGMA:0000524][accessDate: 04-11-2010]
FMAID:9577
1: The part of the body between the thorax and the pelvis; also: the cavity of this part of the trunk containing the chief viscera.n2: The posterior section of the body behind the thorax in an arthropod.[accessedResource: BTO:0000020][accessDate: 04-11-2010]
FBbt:00000020
James Malone
Abdominopelvic region
MAT:0000298
TGMA:0000524
atopy
FMAID:53667
EMAPA:17529
EV:0100157
MA:0000155
James Malone
MAT:0000160
EMAPA:18769
vibrissa[accessedResource: MAT:0000160][accessDate: 04-11-2010]
vibrissa
hair
1: A slender threadlike outgrowth of the epidermis of an animal; especially: one of the usually pigmented filaments that form the characteristic coat of a mammal.n2: The hairy covering of an animal or a body part; especially: the coating of hairs on a human head.[accessedResource: BTO:0001501][accessDate: 04-11-2010]
BTO:0001501
1: A slender threadlike outgrowth of the epidermis of an animal; especially: one of the usually pigmented filaments that form the characteristic coat of a mammal.n2: The hairy covering of an animal or a body part; especially: the coating of hairs on a human head.
Eastern Indian
Ele Holloway
ZFS:0000025
segmentation 10-13 somites
James Malone
(3R,4aR,5S,6S,6aS,10S,10aR,10bS)-3-ethenyl-6,10,10b-trihydroxy-3,4a,7,7,10a-pentamethyl-1-oxododecahydro-1H-benzo[f]chromen-5-yl acetate
colforsine
colforsinum
7beta-acetoxy-8,13-epoxy-1alpha,6beta,9alpha-trihydroxylabd-14-en-11-one
A labdane diterpenoid that has formula C22H34O7.
colforsina
InChI=1/C22H34O7/c1-8-19(5)11-14(25)22(27)20(6)13(24)9-10-18(3,4)16(20)15(26)17(28-12(2)23)21(22,7)29-19/h8,13,15-17,24,26-27H,1,9-11H2,2-7H3/t13-,15-,16-,17-,19-,20-,21+,22-/m0/s1
CHEBI:42471
[H][C@@]12[C@H](O)[C@H](OC(C)=O)[C@@]3(C)O[C@](C)(CC(=O)[C@]3(O)[C@@]1(C)[C@@H](O)CCC2(C)C)C=C
colforsin
http://www.ebi.ac.uk/efo/EFO_0001539
forskolin
InChIKey=OHCQJHSOBUTRHG-KGGHGJDLBB
C22H34O7
Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[accessedResource: TAO:0000367][accessDate: 04-11-2010]
MA:0000319
EV:0100142
FMAID:228659
James Malone
BTO:0001686
articular joint
TAO:0000367
set of all joints
FBbt:00004645
FMAID:7490
articular joint[accessedResource: BTO:0001686][accessDate: 04-11-2010]
The point of contact between elements of an animal skeleton with the parts that surround and support it.[accessedResource: BTO:0001686][accessDate: 04-11-2010]
XAO:0000171
joint
Anatomical junction which consists of parts of two or more adjacent bones or cartilages which are interconnected by organs and/or organ parts that consist of various types of connective tissue. Together with other joints and bones, a joint constitutes the skeletal system. Examples: pubic symphysis, knee joint, temporomandibular joint.
Set of all joints[accessedResource: FMAID:228659][accessDate: 04-11-2010]
Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.
The point of contact between elements of an animal skeleton with the parts that surround and support it.
MAT:0000188
Second segment of circumflex branch of left coronary artery[accessedResource: FMAID:3906][accessDate: 04-11-2010]
Posterior segment of circumflex branch of left coronary artery[accessedResource: FMAID:3906][accessDate: 04-11-2010]
Jie Zheng
Second segment of circumflex branch of left coronary artery
Tomasz Adamusiak
Posterior segment of circumflex branch of left coronary artery
FMAID:3906
distal portion of circumflex branch of left coronary artery
An assay where chromatin immunoprecipitation (ChIP) is used in combination with SNP microarray technology
ChIP-chip by SNP array
Activity that requires physical or mental exertion, especially when performed to develop or maintain fitness.
exercise
James Malone
HP:0002758
EV:0400132
osteoarthritis
James Malone
Ele Holloway
1.8
true
MO_902
obsolete_disease state design
Tomasz Adamusiak
duplication with EFO_0001756
CL:0002363
corneal fibroblast[accessedResource: CL:0002363][accessDate: 04-11-2010]
A keratocyte is a specialized fibroblast residing in the stroma that has a flattened, dendritic cell located between the lamellae with a large flattened nucleus and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratin sulfate.[accessedResource: CL:0002363][accessDate: 04-11-2010]
corneal keratocyte[accessedResource: CL:0002363][accessDate: 04-11-2010]
Tomasz Adamusiak
corneal keratocyte
corneal fibroblast
A keratocyte is a specialized fibroblast residing in the stroma that has a flattened, dendritic cell located between the lamellae with a large flattened nucleus and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratin sulfate.
James Malone
keratocyte
Ele Holloway
GeneRIF:15920728
GeneRIF:15929040
GeneRIF:15050683
GeneRIF:15843584
EAE[accessedResource: DOID:3046][accessDate: 04-11-2010]
GeneRIF:14975582
GeneRIF:12146799
An experimental animal model for central nervous system demyelinating disease. Inoculation with a white matter emulsion combined with FREUND'S ADJUVANT, myelin basic protein, or purified central myelin triggers a T cell-mediated immune response directed towards central myelin. The pathologic features are similar to MULTIPLE SCLEROSIS, including perivascular and periventricular foci of inflammation and demyelination. Subpial demyelination underlying meningeal infiltrations also occurs, which is also a feature of ENCEPHALOMYELITIS, ACUTE DISSEMINATED. Passive immunization with T-cells from an afflicted animal to a normal animal also induces this condition. (From Immunol Res 1998;17(1-2):217-27; Raine CS, Textbook of Neuropathology, 2nd ed, p604-5)[accessedResource: MSH:D004681][accessDate: 04-11-2010]
GeneRIF:11847479
GeneRIF:11721059
EXPER AUTOIMMUNE ENCEPH[accessedResource: MSH:D004681][accessDate: 04-11-2010]
GeneRIF:15778395
GeneRIF:14988414
EXPER AUTOIMMUNE ENCEPH
GeneRIF:14662853
GeneRIF:14662901
Encephalomyelitis, Allergic[accessedResource: MSH:D004681][accessDate: 04-11-2010]
GeneRIF:15837577
GeneRIF:15100315
GeneRIF:11908949
SNOMEDCT:50776006
GeneRIF:15925413
GeneRIF:15501390
GeneRIF:14766173
GeneRIF:12196270
GeneRIF:16272284
GeneRIF:12387457
Experimental Allergic Encephalomyelitis
EXPER ALLERGIC ENCEPH[accessedResource: MSH:D004681][accessDate: 04-11-2010]
ALLERGIC ENCEPH EXPER
GeneRIF:15265890
Allergic encephalomyelitis (disorder)
Encephalomyelitis, Experimental Allergic[accessedResource: MSH:D004681][accessDate: 04-11-2010]
Allergic encephalomyelitis
experimental autoimmune encephalomyelitis
EAE
Experimental allergic encephalomyelitis (disorder)
GeneRIF:15728477
GeneRIF:12538686
GeneRIF:16081797
GeneRIF:12097407
GeneRIF:11985514
GeneRIF:12471147
GeneRIF:16005524
GeneRIF:12925695
ALLERGIC ENCEPH
GeneRIF:15926914
GeneRIF:15081250
GeneRIF:11859094
GeneRIF:14644025
GeneRIF:12799016
GeneRIF:12791309
GeneRIF:12594253
GeneRIF:15328042
GeneRIF:14999816
GeneRIF:15494405
SNOMEDCT:27040004
GeneRIF:15843539
GeneRIF:14507666
GeneRIF:12817031
GeneRIF:12613667
DOID:3046
GeneRIF:16172261
GeneRIF:12429207
GeneRIF:16172262
GeneRIF:15778405
Experimental Allergic Encephalomyelitides[accessedResource: MSH:D004681][accessDate: 04-11-2010]
GeneRIF:12115610
An experimental animal model for central nervous system demyelinating disease. Inoculation with a white matter emulsion combined with FREUND'S ADJUVANT, myelin basic protein, or purified central myelin triggers a T cell-mediated immune response directed towards central myelin. The pathologic features are similar to MULTIPLE SCLEROSIS, including perivascular and periventricular foci of inflammation and demyelination. Subpial demyelination underlying meningeal infiltrations also occurs, which is also a feature of ENCEPHALOMYELITIS, ACUTE DISSEMINATED. Passive immunization with T-cells from an afflicted animal to a normal animal also induces this condition. (From Immunol Res 1998;17(1-2):217-27; Raine CS, Textbook of Neuropathology, 2nd ed, p604-5)
Experimental allergic encephalomyelitis (disorder)[accessedResource: SNOMEDCT:27040004][accessDate: 04-11-2010]
GeneRIF:12626533
GeneRIF:16049338
GeneRIF:15835266
GeneRIF:14991835
GeneRIF:12486171
GeneRIF:15390104
GeneRIF:15710471
GeneRIF:14634082
GeneRIF:12819359
MSH:D004681
GeneRIF:16177127
Allergic encephalomyelitis (disorder)[accessedResource: DOID:3046][accessDate: 04-11-2010]
GeneRIF:11932923
GeneRIF:15850576
GeneRIF:12147621
James Malone
GeneRIF:12960295
ENCEPH ALLERGIC[accessedResource: MSH:D004681][accessDate: 04-11-2010]
GeneRIF:15878627
GeneRIF:15383583
Experimental Allergic Encephalomyelitides
GeneRIF:16002731
GeneRIF:12372981
GeneRIF:12207354
GeneRIF:11477542
GeneRIF:15383607
GeneRIF:11908941
GeneRIF:15522913
GeneRIF:14688366
CLIP-Seq also called RIP-Seq or HITS-CLIP is a method used for finding which RNA species interact with a particular RNA-binding protein (or an RNA). It employs crosslinking between RNA and the protein, followed by immunoprecipitation with antibodies for the protein.
CLIP-Seq
Anna Farne
NIFSTD:sao279801585
James Malone
Tomasz Adamusiak
true
A measurement is an information entity that is a recording of the output of a measurement such as produced by an instrument.
Jie Zheng
MO_144
measurement
fasting
Abstaining from food.[accessedResource: NCIt:C63663][accessDate: 04-11-2010]
Fast[accessedResource: NCIt:C63663][accessDate: 04-11-2010]
Fast
NCIt:C63663
Jie Zheng
Tomasz Adamusiak
Abstaining from food.
TC71
James Malone
Ele Holloway
TADS:0000089
seta[accessedResource: MAT:0000163][accessDate: 04-11-2010]
A simple epithelial sense organ of an invertebrate (as an insect) usually in the form of a spine, plate, rod, cone, or peg that is composed of one or a few cells with a nerve connection.[accessedResource: BTO:0001237][accessDate: 04-11-2010]
BTO:0001237
and by Schneider as
seta
TGMA:0000540
MAT:0000163
Defined by Snodgrass as "a simple sense organ, or one of the structural units of a compound sense organ," and by Schneider as "a specialized area of the integument, consisting of formative cells, the sensory nerve cells, and, in some cases, auxiliary cells".[accessedResource: TGMA:0000540][accessDate: 04-11-2010]
TADS:0000301
A simple epithelial sense organ of an invertebrate (as an insect) usually in the form of a spine, plate, rod, cone, or peg that is composed of one or a few cells with a nerve connection.
sensillum
WBbt:0006929
James Malone
Defined by Snodgrass as "a simple sense organ, or one of the structural units of a compound sense organ," and by Schneider as "a specialized area of the integument, consisting of formative cells, the sensory nerve cells, and, in some cases, auxiliary cells".
GM06993
James Malone
InChIKey=KWGKDLIKAYFUFQ-HPRMROJMCO
A lithium salt that has formula ClLi.
lithium chloride
ClLi
A metal chloride salt with a Li(+) counterion.
CHEBI:48607
Lithiumchlorid
cloruro de litio
lithii chloridum
chlorure de lithium
InChI=1/ClH.Li/h1H;/q;+1/p-1/fCl.Li/h1h;/q-1;m
LiCl
http://www.ebi.ac.uk/efo/EFO_0001567
birnlex_484
NIFSTD:birnlex_484
mouse prenatal
Tomasz Adamusiak
Jie Zheng
((4-Chloro-6-((2,3-dimethylphenyl)amino)-2-pyrimidinyl)thio)acetic acid
WY-14,643
An aryl sulfide that has formula C14H14ClN3O2S.
(4-Chloro-6-(2,3-xylidino)-2-pyrimidinylthio)acetic acid
Cc1cccc(Nc2cc(Cl)nc(SCC(O)=O)n2)c1C
({4-chloro-6-[(2,3-dimethylphenyl)amino]pyrimidin-2-yl}sulfanyl)acetic acid
C14H14ClN3O2S
pirinixic acid
InChIKey=SZRPDCCEHVWOJX-YSFRZULJCA
http://www.ebi.ac.uk/efo/EFO_0001593
InChI=1/C14H14ClN3O2S/c1-8-4-3-5-10(9(8)2)16-12-6-11(15)17-14(18-12)21-7-13(19)20/h3-6H,7H2,1-2H3,(H,19,20)(H,16,17,18)/f/h16,19H
CHEBI:32509
peripheral neuropathy
Tomasz Adamusiak
1.8
true
temp holding class to be placed as hierarchy is restructured
obsolete_temp bin organism part
James Malone
temporary place holder class, no longer needed
http://www.arabidopsis.org/servlets/TairObject?id=1005158725&type=germplasm
CS57701 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158725&type=germplasm
CS57701
James Malone
estrogen
NIFSTD:nifext_5156
estrogenos
http://www.ebi.ac.uk/efo/EFO_0001530
estrogenes Hormon
estrogenes
James Malone
estrogens
oestrogenes
Tomasz Adamusiak
oestrogene
estrogene
oestrogens
A steroid hormone that stimulates or controls the development and maintenance of female sex characteristics in mammals by binding to oestrogen receptors. The oestrogens are named for their importance in the oestrous cycle.
Oestrogen
estrogeno
GM11829
James Malone
James Malone
InChIKey=OGWKCGZFUXNPDA-XQKSVPLYBW
22-Oxovincaleukoblastine
InChI=1/C46H56N4O10/c1-7-42(55)22-28-23-45(40(53)58-5,36-30(14-18-48(24-28)25-42)29-12-9-10-13-33(29)47-36)32-20-31-34(21-35(32)57-4)50(26-51)38-44(31)16-19-49-17-11-15-43(8-2,37(44)49)39(60-27(3)52)46(38,56)41(54)59-6/h9-13,15,20-21,26,28,37-39,47,55-56H,7-8,14,16-19,22-25H2,1-6H3/t28-,37+,38-,39-,42+,43-,44-,45+,46+/m1/s1
CHEBI:28445
http://www.ebi.ac.uk/efo/EFO_0002421
A vinca alkaloid that has formula C46H56N4O10.
vincristine
Ele Holloway
[H][C@@]12N3CC[C@@]11c4cc(c(OC)cc4N(C=O)[C@@]1([H])[C@](O)([C@H](OC(C)=O)[C@]2(CC)C=CC3)C(=O)OC)[C@]1(C[C@@H]2C[N@](CCc3c1[nH]c1ccccc31)C[C@](O)(CC)C2)C(=O)OC
C46H56N4O10
leurocristine
Praepharynx[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
Praepharynx
Pharynx
TGMA:0000132
The part of the stomodeum between the mouth and the oesophagus.[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
FMAID:46688
pharynx structure
MFO:0003080
FBbt:00005380
post-pharynx[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
EHDAA:2947
oesophagus
adult pharynx[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
posterior pharynx[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
muscular dilation of the oesophagus[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
antlia[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
EV:0100065
post-pharynx
Pumporgan
The part of the vertebrate alimentary canal between the cavity of the mouth and the esophagus.nThe pharynx of Nematodes is an efficient pump and forces food into the intestines.
pumping organ
antlia
pharyngeal valve
pumping organ[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
Pumporgan[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
posterior pharynx
Pharynx[accessedResource: FMAID:46688][accessDate: 04-11-2010]
TADS:0000042
James Malone
The part of the stomodeum between the mouth and the oesophagus.
WBbt:0003681
SAEL:82
MA:0000432
Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills. Kimmel et al, 1995.
anterior pharynx
Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills. Kimmel et al, 1995.[accessedResource: TAO:0000056][accessDate: 04-11-2010]
EMAPA:16706
Postpharynx[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
The part of the vertebrate alimentary canal between the cavity of the mouth and the esophagus.nThe pharynx of Nematodes is an efficient pump and forces food into the intestines.[accessedResource: BTO:0001049][accessDate: 04-11-2010]
muscular dilation of the oesophagus
Postpharynx
pharyngeal valve[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
TAO:0000056
MAT:0000049
pump[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
pump
anterior pharynx[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
BTO:0001049
adult pharynx
oesophagus[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
Ele Holloway
HCT-8
James Malone
HCT8
Mole NOS[accessedResource: DOID:2681][accessDate: 04-11-2010]
nevus, NOS[accessedResource: DOID:2681][accessDate: 04-11-2010]
Tomasz Adamusiak
James Malone
nevus (disorder)[accessedResource: DOID:2681][accessDate: 04-11-2010]
nevus
nevus (disorder)
skin mole, NOS
Mole of skin[accessedResource: DOID:2681][accessDate: 04-11-2010]
Mole of skin
nevus, NOS
Mole NOS
skin mole, NOS[accessedResource: DOID:2681][accessDate: 04-11-2010]
DOID:2681
http://www.arabidopsis.org/servlets/TairObject?id=1005158653&type=germplasm
CS57629 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158653&type=germplasm
CS57629
James Malone
NALM1
James Malone
Ele Holloway
tailbud
tailbud[accessedResource: BTO:0001445][accessDate: 04-11-2010]
end bud
Jie Zheng
The rapidly proliferating mass of cells at the caudal extremity of the embryo; remnant of the primitive node.
end bud[accessedResource: BTO:0001445][accessDate: 04-11-2010]
Tomasz Adamusiak
The rapidly proliferating mass of cells at the caudal extremity of the embryo; remnant of the primitive node.[accessedResource: BTO:0001445][accessDate: 04-11-2010]
tail bud
BTO:0001445
R28
James Malone
Natural Language Generator 8th April 2010
James Malone
ARH77
An arh77 is a cell line.
An arh77 is both something that is bearer of a plasma cell neoplasm, and something that derives from a lymphatic system.
Ele Holloway
HCjE
James Malone
James Malone
Central Nervous System Disorder[accessedResource: NCIt:C2934][accessDate: 04-11-2010]
nervous system disease
Central Nervous System Disease[accessedResource: NCIt:C2934][accessDate: 04-11-2010]
Central Nervous System Disease
Central Nervous System Disorder
NCIt:C2934
K562
A K562 is a cell line.
A K562 is bearer of a chronic myelogenous leukemia.
Natural Language Generator 8th April 2010
James Malone
Ele Holloway
A glycosyl glycoside that has formula C12H22O11.
sucrose
InChI=1/C12H22O11/c13-1-4-6(16)8(18)9(19)11(21-4)23-12(3-15)10(20)7(17)5(2-14)22-12/h4-11,13-20H,1-3H2/t4-,5-,6-,7-,8+,9-,10+,11-,12+/m1/s1
beta-D-Fruf-(2<->1)-alpha-D-Glcp
C12H22O11
beta-D-fructofuranosyl alpha-D-glucopyranoside
Sacharose
sacarosa
Saccharose
Cane sugar
table sugar
OC[C@H]1O[C@H](O[C@]2(CO)O[C@H](CO)[C@@H](O)[C@@H]2O)[C@H](O)[C@@H](O)[C@@H]1O
1-alpha-D-Glucopyranosyl-2-beta-D-fructofuranoside
CHEBI:17992
InChIKey=CZMRCDWAGMRECN-UGDNZRGBBE
http://www.ebi.ac.uk/efo/EFO_0001616
CHEBI:5417
2-amino-2-deoxyglucose
C6H13NO5
http://www.ebi.ac.uk/efo/EFO_0001544
glucosamine
Glucosamin
GlcN
Glukosamin
interferon alpha
Tomasz Adamusiak
James Malone
HCC1500
NCIt:C3113
James Malone
Tomasz Adamusiak
An abnormal increase in the number of cells in an organ or a tissue with consequent enlargement.[accessedResource: NCIt:C3113][accessDate: 04-11-2010]
Hyperplastic
An abnormal increase in the number of cells in an organ or a tissue with consequent enlargement.
An abnormal increase in the number of (otherwise normal) cells in an organ or a tissue with consequent enlargement.
Hyperplastic[accessedResource: NCIt:C3113][accessDate: 04-11-2010]
hyperplasia
James Malone
Tomasz Adamusiak
labelling
MO_471
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#labeling[accessedResource: MO_471][accessDate: 04-11-2010]
The process of marking a material in some way for experimental purposes. E.g. the labelling of a nucleic acid with biotin in a microarray experiment
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#labeling
Jie Zheng
COLO320DM
James Malone
Ele Holloway
MAT:0000518
plant developmental tissue
James Malone
ZEA:0015085
PO:0020136
male inflorescence
James Malone
YCC7
James Malone
Ele Holloway
HT1080
James Malone
Ele Holloway
jasmonates
http://www.ebi.ac.uk/efo/EFO_0001826
CHEBI:24937
jasmonic acids
James Malone
camptothecin
C20H16N2O4
InChIKey=VSJKWCGYPAHWDS-FQEVSTJZBY
(4S)-4-ethyl-4-hydroxy-1H-pyrano[3',4':6,7]indolizino[1,2-b]quinoline-3,14(4H,12H)-dione
20(S)-camptothecine
CC[C@@]1(O)C(=O)OCc2c1cc1-c3nc4ccccc4cc3Cn1c2=O
A pyranoindolizinoquinoline that has formula C20H16N2O4.
InChI=1/C20H16N2O4/c1-2-20(25)14-8-16-17-12(7-11-5-3-4-6-15(11)21-17)9-22(16)18(23)13(14)10-26-19(20)24/h3-8,25H,2,9-10H2,1H3/t20-/m0/s1
(S)-(+)-camptothecin
D-camptothecin
http://www.ebi.ac.uk/efo/EFO_0001498
James Malone
CHEBI:27656
Camptothecine
CPT
21,22-Secocamptothecin-21-oic acid lactone
1.5
The lower part of the pharynx that connects to the esophagus.
Obsolete - duplication use laryngopharynx EFO_0001388 instead
pars laryngea pharyngis
pars laryngea pharyngis[accessedResource: BTO:0001740][accessDate: 10-05-2010]
true
laryngopharynx
hypopharynx[accessedResource: BTO:0001740][accessDate: 10-05-2010]
BTO:0001740
James Malone
obsolete_hypopharynx
NCIt:C12246
The lower part of the pharynx that connects to the esophagus.[accessedResource: NCIt:C12246][accessDate: 10-05-2010]
hypopharynx
The hypopharynx is part of the pharynx that lies below the upper edge of the epiglottis and opens into the larynx and esophagus.
The portion of the pharynx that lies below the upper edge of the epiglottis and opens into the larynx and esophagus.
The portion of the pharynx that lies below the upper edge of the epiglottis and opens into the larynx and esophagus.[accessedResource: BTO:0001740][accessDate: 10-05-2010]
laryngopharynx[accessedResource: BTO:0001740][accessDate: 10-05-2010]
NCIt:C32365
conjunctival epithelium
James Malone
postcranial axial skeleton
The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.[accessedResource: ZFA:0000317][accessDate: 04-11-2010]
EMAPA:17214
SAEL:121
Backbone[accessedResource: FMAID:13478][accessDate: 04-11-2010]
The post-cranial structural components forming the long axis of the vertebrate body; usually consists of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.
NIFSTD:sao1145756102
TAO:0000317
ZFA:0000317
Vertebral column[accessedResource: FMAID:13478][accessDate: 04-11-2010]
Tomasz Adamusiak
Spinal column
vertebral column
AAO:0000034
The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.
James Malone
FMAID:13478
postcranial axial skeleton[accessedResource: TAO:0000317][accessDate: 04-11-2010]
The post-cranial structural components forming the long axis of the vertebrate body; usually consists of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.[accessedResource: TAO:0000317][accessDate: 04-11-2010]
vertebral column structure
axial skeleton[accessedResource: TAO:0000317][accessDate: 04-11-2010]
Spine
Spine[accessedResource: NIFSTD:sao1145756102][accessDate: 04-11-2010]
Backbone
MA:0000308
axial skeleton
EHDAA:5049
Spinal column[accessedResource: FMAID:13478][accessDate: 04-11-2010]
embryonic day 17.5
Tomasz Adamusiak
Jie Zheng
A malignant neoplasm characterized by a vascular proliferation which usually contains blunt endothelial cells. Erythrocyte extravasation and hemosiderin deposition are frequently present. The most frequent site of involvement is the skin; however it may also occur internally. It generally develops in people with compromised immune systems including those with acquired immune deficiency syndrome (AIDS).
multiple idiopathic hemorrhagic sarcoma cell[accessedResource: BTO:0002071][accessDate: 04-11-2010]
idiopathic multiple pigmented hemorrhagic sarcoma cell[accessedResource: BTO:0002071][accessDate: 04-11-2010]
Kaposi's Sarcoma
Multiple Hemorrhagic Sarcoma
Kaposi's sarcoma cell
A malignant neoplasm characterized by a vascular proliferation which usually contains blunt endothelial cells. Erythrocyte extravasation and hemosiderin deposition are frequently present. The most frequent site of involvement is the skin; however it may also occur internally. It generally develops in people with compromised immune systems including those with acquired immune deficiency syndrome (AIDS).[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
multiple idiopathic hemorrhagic sarcoma cell
A multicentric, malignant neoplastic vascular proliferation characterized by bluish-red cutaneous nodules, usually on the legs, toes, or feet, that slowly increase in size and number and spread to more proximal sites. The tumors have endothelium-lined channels and vascular spaces mixed with aggregates of spindle-shaped cells; they may remain confined to skin and subcutaneous tissue, but widespread visceral involvement may occur.
Kaposi's Sarcoma[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
Kaposi - Kaposi's Sarcoma[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
Kaposi Sarcoma
Kaposi - Kaposi's Sarcoma
James Malone
Kaposi Sarcoma[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
BTO:0002071
A multicentric, malignant neoplastic vascular proliferation characterized by bluish-red cutaneous nodules, usually on the legs, toes, or feet, that slowly increase in size and number and spread to more proximal sites. The tumors have endothelium-lined channels and vascular spaces mixed with aggregates of spindle-shaped cells; they may remain confined to skin and subcutaneous tissue, but widespread visceral involvement may occur.[accessedResource: BTO:0002071][accessDate: 04-11-2010]
KS[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
idiopathic multiple pigmented hemorrhagic sarcoma cell
KS
Multiple Hemorrhagic Sarcoma[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
NCIt:C9087
FBdv:00005317
EVM:2990009
MAT:0000063
gastrula[accessedResource: MAT:0000063][accessDate: 04-11-2010]
WBIs:0000010
XAO:1000005
James Malone
gastrulating mbryo
gastrulating mbryo[accessedResource: MAT:0000063][accessDate: 04-11-2010]
gastrula
gastrula stage
MAT:0000347
plant fluid
James Malone
plant germ
GRO:0005343[accessedResource: BTO:0001233][accessDate: 04-11-2010]
MAT:0000226
plant embryo
The early developmental stage that, through embryological development, ultimately becomes an adult individual. In plants, that portion of a seed that will form the growing seedling following germination; it has a radicle, apical meristem, and embryonic leaf or leaves.[accessedResource: BTO:0001233][accessDate: 04-11-2010]
embryo[accessedResource: MAT:0000226][accessDate: 04-11-2010]
plant germ[accessedResource: BTO:0001233][accessDate: 04-11-2010]
ZEA:0015179
The early developmental stage that, through embryological development, ultimately becomes an adult individual. In plants, that portion of a seed that will form the growing seedling following germination; it has a radicle, apical meristem, and embryonic leaf or leaves.
James Malone
PO:0009009
BTO:0001233
GRO:0005343
embryo
FMA:35175
knee
knee joint
James Malone
MO_738
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#timepoint
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#timepoint[accessedResource: MO_738][accessDate: 04-11-2010]
timepoint
Tomasz Adamusiak
Jie Zheng
James Malone
JCRB0081
RERF-LC-MS
James Malone
Ele Holloway
CL:0000610
A cell found in seeded plants.
A cell found in seeded plants.[accessedResource: CL:0000610][accessDate: 04-11-2010]
plant cell
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0000104
BN
Rattus rattiscus
Rattus norwegicus
Rattus norvegicus8
Rattus norvegicus
rat
http://www.informatics.jax.org/external/festing/rat/docs/BN.shtml
James Malone
common rat
Rattus sp. strain Wistar
brown rat
Rattus norvegicus, commonly Brown or Norway rat, is a rat strain as described in http://www.informatics.jax.org/external/festing/rat/docs/BN.shtml
Gunn rats
rats
Norway rat
Adenocarcinoma of the Cervix Uteri[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
Uterine Cervix Adenocarcinoma[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
Adenocarcinoma of Cervix Uteri
Cervix Uteri Adenocarcinoma[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
Adenocarcinoma of Cervix[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
Cervix Adenocarcinoma
cervical adenocarcinoma
DOID:3702
NCIt:C4029
An adenocarcinoma arising from the cervical epithelium. It accounts for approximately 15% of invasive cervical carcinomas. Increased numbers of sexual partners and human papilloma virus (HPV) infection are risk factors. Grossly, advanced cervical adenocarcinoma may present as an exophytic mass, an ulcerated lesion, or diffuse cervical enlargement. Microscopically, the majority of cervical adenocarcinomas are of the endocervical (mucinous) type.
James Malone
Adenocarcinoma of the Cervix Uteri
Cervix Adenocarcinoma[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
An adenocarcinoma arising from the cervical epithelium. It accounts for approximately 15% of invasive cervical carcinomas. Increased numbers of sexual partners and human papilloma virus (HPV) infection are risk factors. Grossly, advanced cervical adenocarcinoma may present as an exophytic mass, an ulcerated lesion, or diffuse cervical enlargement. Microscopically, the majority of cervical adenocarcinomas are of the endocervical (mucinous) type.[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
Adenocarcinoma of the Cervix[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
Adenocarcinoma of the Cervix
Adenocarcinoma of the Uterine Cervix
Adenocarcinoma of Uterine Cervix
Adenocarcinoma of Cervix Uteri[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
Adenocarcinoma of the Uterine Cervix[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
Cervix Uteri Adenocarcinoma
Adenocarcinoma of Cervix
Uterine Cervix Adenocarcinoma
Adenocarcinoma of Uterine Cervix[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
http://jaxmice.jax.org/strain/009311.html
ILSXISS60/TejJ
Tomasz Adamusiak
accelerated neurological senescence
James Malone
Ele Holloway
tail fin[accessedResource: ZFA:0001058][accessDate: 04-11-2010]
ZFA:0001058
tail[accessedResource: ZFA:0001058][accessDate: 04-11-2010]
Fin that is the most posterior median fin. It is composed of a complex of three modified centra and modified neural and hemal arches and spines.
Fin that is the most posterior median fin. It is composed of a complex of three modified centra and modified neural and hemal arches and spines.[accessedResource: ZFA:0001058][accessDate: 04-11-2010]
caudal fin
tail
James Malone
tail fin
IMR-90
James Malone
R46
James Malone
true
epigenetic factor
NCIt:C3771
true
1.5
Lobular carcinoma (morphologic abnormality)
Lobular carcinoma of breast (disorder)
Lobular carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:89740008][accessDate: 10-05-2010]
James Malone
obsolete_lobular breast carcinoma
Infiltrating lobular carcinoma[accessedResource: SNOMEDCT:89740008][accessDate: 10-05-2010]
DOID:3457
Lobular carcinoma NOS (morphologic abnormality)
SNOMEDCT:189713007
[M]Lobular carcinoma NOS[accessedResource: SNOMEDCT:189713007][accessDate: 10-05-2010]
Lobular carcinoma NOS (morphologic abnormality)[accessedResource: DOID:3457][accessDate: 10-05-2010]
An adenocarcinoma of the breast arising from the lobules. This is a relatively uncommon carcinoma, represents approximately 10% of the breast adenocarcinomas and is often bilateral or multifocal.[accessedResource: NCIt:C3771][accessDate: 10-05-2010]
An adenocarcinoma of the breast arising from the lobules. This is a relatively uncommon carcinoma, represents approximately 10% of the breast adenocarcinomas and is often bilateral or multifocal.
Lobular carcinoma, NOS[accessedResource: SNOMEDCT:89740008][accessDate: 10-05-2010]
Lobular carcinoma of the breast[accessedResource: DOID:3457][accessDate: 10-05-2010]
Carcinoma, Lobular
Lobular carcinoma of breast (disorder)[accessedResource: DOID:3457][accessDate: 10-05-2010]
[M]Lobular carcinoma NOS (morphologic abnormality)
Lobular carcinoma, NOS
A infiltrating (invasive) breast cancer, relatively uncommon, accounting for only 5%-10% of breast tumors in most series. It is often an area of ill-defined thickening in the breast, in contrast to the dominant lump characteristic of ductal carcinoma. It is typically composed of small cells in a linear arrangement with a tendency to grow around ducts and lobules. There is likelihood of axillary nodal involvement with metastasis to meningeal and serosal surfaces. (DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p1205)[accessedResource: MSH:D018275][accessDate: 10-05-2010]
Lobular Breast Carcinoma
GeneRIF:15803365
Duplicate with invasive lobular carcinoma (EFO_0000553)
MSH:D018275
[M]Lobular carcinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189713007][accessDate: 10-05-2010]
Lobular Carcinoma of Breast[accessedResource: NCIt:C3771][accessDate: 10-05-2010]
GeneRIF:15695379
Lobular carcinoma of the breast
[M]Lobular carcinoma NOS
Lobular Carcinomas
GeneRIF:12661036
Infiltrating lobular carcinoma
Lobular Breast Carcinoma[accessedResource: NCIt:C3771][accessDate: 10-05-2010]
Carcinomas, Lobular[accessedResource: MSH:D018275][accessDate: 10-05-2010]
Lobular Carcinoma[accessedResource: MSH:D018275][accessDate: 10-05-2010]
A infiltrating (invasive) breast cancer, relatively uncommon, accounting for only 5%-10% of breast tumors in most series. It is often an area of ill-defined thickening in the breast, in contrast to the dominant lump characteristic of ductal carcinoma. It is typically composed of small cells in a linear arrangement with a tendency to grow around ducts and lobules. There is likelihood of axillary nodal involvement with metastasis to meningeal and serosal surfaces. (DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p1205)
SNOMEDCT:278054005
Lobular carcinoma of breast
GeneRIF:12907138
SNOMEDCT:89740008
Lobular adenocarcinoma
Lobular Adenocarcinoma[accessedResource: NCIt:C3771][accessDate: 10-05-2010]
An assay in which the methylation state of DNA is determined and is compared between samples using sequencing based technology
methylation profiling by high throughput sequencing
CL:0000010
cell line cell
James Malone
Ele Holloway
Algerian Mouse
http://www.ebi.ac.uk/efo/EFO_0002649
Mus spretus
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158891&type=germplasm
CS57867 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158891&type=germplasm
CS57867
James Malone
MO_1019
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_component_comparison_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_component_comparison_design[accessedResource: MO_1019][accessDate: 04-11-2010]
cell component comparison design
Tomasz Adamusiak
James Malone
axilla
The underside concavity where the arm and the shoulder are joined.[accessedResource: NCIt:C12674][accessDate: 04-11-2010]
Underarm
The underside concavity where the arm and the shoulder are joined.
Underarm[accessedResource: NCIt:C12674][accessDate: 04-11-2010]
Armpit
NCIt:C12674
Armpit[accessedResource: NCIt:C12674][accessDate: 04-11-2010]
The largest nerve of the body: origin, sacral plexus-L4-S3; it leaves the pelvis through the greater sciatic foramen; branches, divides into the tibial and common peroneal nerves, usually in lower third of thigh; distribution-see individual branches, in this table; modality, general sensory and motor.[accessedResource: BTO:0001221][accessDate: 04-11-2010]
sciatic nerve
NCIt:C52810
The longest single nerve that is formed by the merging of the ventral rami of the L4, L5, and S1 in the pelvis and passes down the lower limb where it divides into the common peroneal and tibial nerves.
James Malone
nervus ischiadicus[accessedResource: BTO:0001221][accessDate: 04-11-2010]
nervus sciaticus[accessedResource: BTO:0001221][accessDate: 04-11-2010]
FMA:19034
nervus sciaticus
nervus ischiadicus
BTO:0001221
The longest single nerve that is formed by the merging of the ventral rami of the L4, L5, and S1 in the pelvis and passes down the lower limb where it divides into the common peroneal and tibial nerves.[accessedResource: NCIt:C52810][accessDate: 04-11-2010]
The largest nerve of the body: origin, sacral plexus-L4-S3; it leaves the pelvis through the greater sciatic foramen; branches, divides into the tibial and common peroneal nerves, usually in lower third of thigh; distribution-see individual branches, in this table; modality, general sensory and motor.
NCI-H226
James Malone
Ele Holloway
MM1
James Malone
NCIt:C53147
A muscle in the back of the thigh. Its action involves the knee flexion and hip extension.
A muscle in the back of the thigh. Its action involves the knee flexion and hip extension.[accessedResource: NCIt:C53147][accessDate: 04-11-2010]
biceps femoris
James Malone
NCI-H522
James Malone
Ele Holloway
interventriculare cordis[accessedResource: BTO:0002483][accessDate: 04-11-2010]
The partition that separates the left ventricle from the right ventricle, consisting of a muscular and a membranous part.[accessedResource: BTO:0002483][accessDate: 04-11-2010]
interventriculare cordis
interventricular septum of heart
FMA:7133
interventricular septum of heart[accessedResource: BTO:0002483][accessDate: 04-11-2010]
ventricular septum
The partition that separates the left ventricle from the right ventricle, consisting of a muscular and a membranous part.
BTO:0002483
James Malone
ventricular septum[accessedResource: BTO:0002483][accessDate: 04-11-2010]
interventricular septum
Cardiac septum which separates the right ventricle from the left ventricle.
MO_984
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#consultant
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#consultant[accessedResource: MO_984][accessDate: 04-11-2010]
consultant
Tomasz Adamusiak
Often referred to as a blast cell. Unlike other usages of the suffix -blast a lymphoblast is a further differentiation of a lymphocyte, T- or B-, occasioned by an antigenic stimulus. The lymphoblast usually develops by enlargement of a lymphocyte, active re-entry to the S phase of the cell cycle, mitogenesis and production of much m-RNA and ribosomes.[accessedResource: BTO:0000772][accessDate: 04-11-2010]
BTO:0000772
James Malone
An immature lymphocyte that has enlarged in response to antigenic stimulation.
lymphoblast
NCIt:C13013
Often referred to as a blast cell. Unlike other usages of the suffix -blast a lymphoblast is a further differentiation of a lymphocyte, T- or B-, occasioned by an antigenic stimulus. The lymphoblast usually develops by enlargement of a lymphocyte, active re-entry to the S phase of the cell cycle, mitogenesis and production of much m-RNA and ribosomes.
An immature lymphocyte that has enlarged in response to antigenic stimulation.[accessedResource: NCIt:C13013][accessDate: 04-11-2010]
Oc1cc(O)c2C[C@@H](OC(=O)c3cc(O)c(O)c(O)c3)[C@H](Oc2c1)c1cc(O)c(O)c(O)c1
EGCG
http://www.ebi.ac.uk/efo/EFO_0002670
epigallocatechin gallate
InChI=1/C22H18O11/c23-10-5-12(24)11-7-18(33-22(31)9-3-15(27)20(30)16(28)4-9)21(32-17(11)6-10)8-1-13(25)19(29)14(26)2-8/h1-6,18,21,23-30H,7H2/t18-,21-/m1/s1
(-)-Epigallocatechin-3-o-gallate
(2R,3R)-5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromen-3-yl 3,4,5-trihydroxybenzoate
(-)-epigallocatechin 3-gallate
InChIKey=WMBWREPUVVBILR-WIYYLYMNBM
http://www.arabidopsis.org/servlets/TairObject?id=1005158795&type=germplasm
CS57771 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158795&type=germplasm
CS57771
James Malone
James Malone
Ele Holloway
dibenzazepine
dibenzoazepine
CHEBI:47804
dibenzazepines
dibenzoazepines
http://www.ebi.ac.uk/efo/EFO_0002491
NCIt:C12748
A group of organs surrounded by loose connective tissue, separating the two pleural sacs, between the sternum anteriorly and the vertebral column posteriorly as well as from the thoracic inlet superiorly to the diaphragm inferiorly. The mediastinum contains the heart and pericardium, the bases of the great vessels, the trachea and bronchi, esophagus, thymus, lymph nodes, thoracic duct, phrenic and vagus nerves, and other structures and tissues.
A group of organs surrounded by loose connective tissue, separating the two pleural sacs, between the sternum anteriorly and the vertebral column posteriorly as well as from the thoracic inlet superiorly to the diaphragm inferiorly. The mediastinum contains the heart and pericardium, the bases of the great vessels, the trachea and bronchi, esophagus, thymus, lymph nodes, thoracic duct, phrenic and vagus nerves, and other structures and tissues.[accessedResource: NCIt:C12748][accessDate: 04-11-2010]
mediastinum
Tomasz Adamusiak
kelvin
http://www.ebi.ac.uk/efo/EFO_0001689
A thermodynamic temperature unit which is equal to the fraction 1/273.16 of the thermodynamic temperature of the triple point of water.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#K[accessedResource: MO_614][accessDate: 04-11-2010]
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#K
Jie Zheng
A kelvin is a thermodynamic temperature unit which is equal to the fraction 1/273.16 of the thermodynamic temperature of the triple point of water.
Tomasz Adamusiak
true
MO_614
K
EV:0100456
MFO:0002960
blood vasculature
blood vasculature[accessedResource: TAO:0001079][accessDate: 04-11-2010]
TAO:0001079
vasculature[accessedResource: MAT:0000393][accessDate: 04-11-2010]
blood vessels
BTO:0001102
blood vessels[accessedResource: TAO:0001079][accessDate: 04-11-2010]
SAEL:9
James Malone
blood vessel
Any of the vessels through which blood circulates in the body.
Any of the vessels through which blood circulates in the body.[accessedResource: BTO:0001102][accessDate: 04-11-2010]
vasculature
vessel
vessel[accessedResource: MAT:0000393][accessDate: 04-11-2010]
circulatory system[accessedResource: TAO:0001079][accessDate: 04-11-2010]
MAT:0000393
circulatory system
embryonic day 16.5
Tomasz Adamusiak
Jie Zheng
http://jaxmice.jax.org/strain/009309.html
ILSXISS50/TejJ
Tomasz Adamusiak
NIH3T3-L1
James Malone
integumental cell
Integument
Integument[accessedResource: NCIt:C12470][accessDate: 04-11-2010]
Skin[accessedResource: NCIt:C12470][accessDate: 04-11-2010]
Skin
An organ that constitutes the external surface of the body. It consists of the epidermis, dermis, and skin appendages.
NCIt:C12470
James Malone
An organ that constitutes the external surface of the body. It consists of the epidermis, dermis, and skin appendages.[accessedResource: NCIt:C12470][accessDate: 04-11-2010]
TAO:0000107
eyeball
visual system
EMAPA:16198
adult compound eye[accessedResource: MAT:0000140][accessDate: 04-11-2010]
FMAID:54448
BTO:0000439
Komplexauge
compound eye[accessedResource: FBbt:00004508][accessDate: 04-11-2010]
eye[accessedResource: ZFA:0000107][accessDate: 04-11-2010]
A cavitated compound organ that transduces light waves into neural signals.[accessedResource: TAO:0000107][accessDate: 04-11-2010]
A light-perceptive organ consisting of an aggregation of optic elements (ommatidia) generally located on each side of the head; the cuticular part (cornea) consists of several hundred circular corneal facets (lenses); bounded by the ocular sclerite.
compound eye
Tomasz Adamusiak
TGMA:0000024
zusammengesetztes Auge
Orbital part of face
Komplexauge[accessedResource: TGMA:0000024][accessDate: 04-11-2010]
adult compound eye
MA:0000261
Cavitated compound organ that consists of the neural retina, lens, cornea and iris and is the sensory apparatus of the visual system.[accessedResource: ZFA:0000107][accessDate: 04-11-2010]
An organ of sight; especially: a nearly spherical hollow organ that is lined with a sensitive retina, is lodged in a bony orbit in the skull, is the vertebrate organ of sight, and is normally paired.n2: All the visible structures within and surrounding the orbit and including eyelids, eyelashes, and eyebrows.[accessedResource: BTO:0000439][accessDate: 04-11-2010]
XAO:0000179
visual apparatus[accessedResource: MAT:0000140][accessDate: 04-11-2010]
A light-perceptive organ consisting of an aggregation of optic elements (ommatidia) generally located on each side of the head; the cuticular part (cornea) consists of several hundred circular corneal facets (lenses); bounded by the ocular sclerite.[accessedResource: TGMA:0000024][accessDate: 04-11-2010]
visual apparatus
eyes
EHDAA:936
An organ of sight; especially: a nearly spherical hollow organ that is lined with a sensitive retina, is lodged in a bony orbit in the skull, is the vertebrate organ of sight, and is normally paired.n2: All the visible structures within and surrounding the orbit and including eyelids, eyelashes, and eyebrows.
TAO:0001127
eye structure
Cavitated compound organ that consists of the neural retina, lens, cornea and iris and is the sensory apparatus of the visual system.
Orbital region[accessedResource: FMAID:54448][accessDate: 04-11-2010]
MFO:0003480
MAT:0000140
AAO:0000632
NIFSTD:birnlex_1169
The compound eye is a light sensing organ composed of ommatidia.[accessedResource: FBbt:00004508][accessDate: 04-11-2010]
The compound eye is a light sensing organ composed of ommatidia.
eyes[accessedResource: MAT:0000140][accessDate: 04-11-2010]
visual_system[accessedResource: MAT:0000140][accessDate: 04-11-2010]
TADS:0000061
FBbt:00004508
Facettenauge[accessedResource: TGMA:0000024][accessDate: 04-11-2010]
eyeball[accessedResource: TAO:0000107][accessDate: 04-11-2010]
eye
Facettenauge
A cavitated compound organ that transduces light waves into neural signals.
zusammengesetztes Auge[accessedResource: TGMA:0000024][accessDate: 04-11-2010]
Orbital region
James Malone
ZFA:0000107
EV:0100336
NCI-H187
James Malone
Ele Holloway
ArrayExpress production team
An assay in which the transcriptome of a biological sample is analysed.
transcription profiling
James Malone
HCC2218
James Malone
Ele Holloway
1-benzofuran
InChI=1/C8H6O/c1-2-4-8-7(3-1)5-6-9-8/h1-6H
http://www.ebi.ac.uk/efo/EFO_0002486
2,3-benzofuran
Benzofuran
cumarone
InChIKey=IANQTJSKSUMEQM-UHFFFAOYAU
James Malone
coumaron
benzo[b]furan
A benzofuran that has formula C8H6O.
C8H6O
c1ccc2occc2c1
coumarone
Ele Holloway
CHEBI:35260
NCI-H810
James Malone
Ele Holloway
James Malone
Neural stem cell is characterized as an undifferentiated cell that originates from the neuroectoderm and has the capacity both to perpetually self-renew without differentiating and to generate multiple types of lineage-restricted progenitors.
Neural stem cell is characterized as an undifferentiated cell that originates from the neuroectoderm and has the capacity both to perpetually self-renew without differentiating and to generate multiple types of lineage-restricted progenitors.[accessedResource: CL:0000047][accessDate: 04-11-2010]
neural stem cell
CL:0000047
neuronal stem cell
neural stem progenitor cell
Malignant Central Nervous System Tumor[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Glial Cell Tumor
Malignant Neoplasm of CNS[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Glial Cell Tumor[accessedResource: NIFSTD:birnlex_12618][accessDate: 04-11-2010]
Central Nervous System Neoplasms, Malignant
Malignant Tumor of the CNS[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant Neoplasm of Central Nervous System[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
NCIt:C4627
NIFSTD:birnlex_12618
Malignant Neoplasm of the Central Nervous System[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
CNS Cancer[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
James Malone
Benign and malignant central nervous system neoplasms derived from glial cells (i.e., astrocytes, oligodendrocytes, and ependymocytes). Astrocytes may give rise to astrocytomas ( ASTROCYTOMA) or glioblastoma multiforme (see GLIOBLASTOMA). Oligodendrocytes give rise to oligodendrogliomas ( OLIGODENDROGLIOMA) and ependymocytes may undergo transformation to become EPENDYMOMA; CHOROID PLEXUS NEOPLASMS; or colloid cysts of the third ventricle (MeSH).[accessedResource: NIFSTD:birnlex_12618][accessDate: 04-11-2010]
Glioma[accessedResource: NIFSTD:birnlex_12618][accessDate: 04-11-2010]
Malignant Neoplasm of the CNS[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Cancer of CNS
central nervous system cancer
Malignant Central Nervous System Tumor
Malignant Central Nervous System Neoplasm[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Cancer of the CNS
CNS Cancer
Tomasz Adamusiak
Malignant Tumor of CNS[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant CNS Neoplasm
Malignant Central Nervous System Neoplasm
Malignant Neoplasm of CNS
Malignant CNS Tumor
Malignant Tumor of Central Nervous System[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Cancer of Central Nervous System
Malignant Tumor of the Central Nervous System[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant CNS Tumor[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Central Nervous System Neoplasms, Malignant[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant CNS Neoplasms
Cancer of the Central Nervous System[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
A primary or metastatic malignant neoplasm involving the brain or spinal cord. Representative examples include anaplastic astrocytoma, glioblastoma, anaplastic (malignant) meningioma, lymphoma, and metastatic carcinoma from another anatomic site.[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Cancer of Central Nervous System[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Glioma
Malignant Tumor of CNS
Malignant Tumor of Central Nervous System
Malignant Neoplasm of the Central Nervous System
A primary or metastatic malignant neoplasm involving the brain or spinal cord. Representative examples include anaplastic astrocytoma, glioblastoma, anaplastic (malignant) meningioma, lymphoma, and metastatic carcinoma from another anatomic site.
Malignant CNS Neoplasm[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant Tumor of the Central Nervous System
Cancer of the CNS[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Cancer of the Central Nervous System
Benign and malignant central nervous system neoplasms derived from glial cells (i.e., astrocytes, oligodendrocytes, and ependymocytes). Astrocytes may give rise to astrocytomas ( ASTROCYTOMA) or glioblastoma multiforme (see GLIOBLASTOMA). Oligodendrocytes give rise to oligodendrogliomas ( OLIGODENDROGLIOMA) and ependymocytes may undergo transformation to become EPENDYMOMA; CHOROID PLEXUS NEOPLASMS; or colloid cysts of the third ventricle (MeSH).
Malignant Neoplasm of the CNS
CNS Malignant Neoplasms[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant Neoplasm of Central Nervous System
Cancer of CNS[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant Tumor of the CNS
https://www.cbil.upenn.edu/RADQuerier/php/sampleInfo.php?assay_id=10943&&study_id=3144
Severe Combined Immunodeficiency (SCID) mutant in C57BL6 genetic background mouse strain.
C57BL/6-scid
Tomasz Adamusiak
Jie Zheng
The temperature that a biosource is exposed to.
exposure temperature
James Malone
James Malone
NCIt:C33346
Posterior central gyrus
Postrolandic gyrus[accessedResource: FMA:61896][accessDate: 04-11-2010]
postcentral gyrus
FMA:61896
Postcentral convolution[accessedResource: FMA:61896][accessDate: 04-11-2010]
Postrolandic gyrus
Posterior central gyrus[accessedResource: FMA:61896][accessDate: 04-11-2010]
Postcentral convolution
James Malone
NCI Metathesaurus
tumour
merged with neoplasm EFO_0000616
An abnormal mass of tissue that results from excessive cell division. Tumors perform no useful body function. They may be benign (not cancerous) or malignant (cancerous).
Breast_Tumor_Luminal
obsolete_tumor
1.8
true
NCI-H2052
James Malone
Ele Holloway
ZFS:0000039
Larval:Days 7-13
Larval:Days 7-13[accessedResource: ZFS:0000039][accessDate: 04-11-2010]
larval day 7-13
James Malone
cervical neck region
James Malone
suprarenal cortex[accessedResource: BTO:0000045][accessDate: 04-11-2010]
cortex glandulae suprarenalis[accessedResource: BTO:0000045][accessDate: 04-11-2010]
BTO:0000045
NCIt:C12396
Cortex of suprarenal gland
The outer portion of the adrenal glands that produces several steroid hormones, including cortisol and aldosterone.[accessedResource: BTO:0000045][accessDate: 04-11-2010]
Cortical[accessedResource: NCIt:C12396][accessDate: 04-11-2010]
Cortex of adrenal gland[accessedResource: NCIt:C12396][accessDate: 04-11-2010]
EMAPA:18427
cortex glandulae suprarenalis
Cortical
James Malone
XAO:0000165
MA:0000118
The outer layer of the adrenal gland. It secretes mineralocorticoids, androgens, and glucocorticoids. (MeSH)[accessedResource: NCIt:C12396][accessDate: 04-11-2010]
Cortex of adrenal gland
The outer portion of the adrenal glands that produces several steroid hormones, including cortisol and aldosterone.
adrenal cortex
MAT:0000494
suprarenal cortex
The outer layer of the adrenal gland. It secretes mineralocorticoids, androgens, and glucocorticoids. (MeSH)
EV:0100136
MO_462
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#strain_or_line_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#strain_or_line_design[accessedResource: MO_462][accessDate: 04-11-2010]
strain or line design
Tomasz Adamusiak
pigment cell
MFO:0003360
chromatocyte[accessedResource: ZFA:0009090][accessDate: 04-11-2010]
An endogenous molecular entity that results in a colour of an organism as the consequence of the selective absorption of light.
pigment
AAO:0000430
NIFSTD:sao1231384859
MAT:0000159
chromatophore[accessedResource: ZFA:0009090][accessDate: 04-11-2010]
A pigment cell is a cell that contains pigment granules.
biological pigment
http://www.ebi.ac.uk/efo/EFO_0000957
pigment cells
Tomasz Adamusiak
James Malone
ZFA:0009090
chromatophore
A pigment cell is a cell that contains pigment granules.[accessedResource: CL:0000147][accessDate: 04-11-2010]
pigment cells[accessedResource: MAT:0000159][accessDate: 04-11-2010]
chromatocyte
CL:0000147
pigmentation
pigment cell[accessedResource: CL:0000147][accessDate: 04-11-2010]
pigmentation[accessedResource: MAT:0000159][accessDate: 04-11-2010]
pigments
http://www.arabidopsis.org/servlets/TairObject?id=1005158672&type=germplasm
CS57648 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158672&type=germplasm
CS57648
James Malone
CHEBI:50249
anticoagulants
anticoagulante
An agent that prevents blood clotting.
anticoagulant
http://www.ebi.ac.uk/efo/EFO_0001885
James Malone
Obsolete: No longer required in EFO
true
NCIt:C22729
Bladder (MMHCC)
obsolete_bladder MMHCC
James Malone
leucocyte
immune cell
leukocyte
James Malone
A nucleated cell of the myeloid or lymphoid lineages, found in blood or other tissue.[accessedResource: CL:0000738][accessDate: 10-05-2010]
use leukocyte EFO_0000566
CL:0000738
obsolete_white blood cell
leucocyte[accessedResource: CL:0000738][accessDate: 10-05-2010]
A nucleated cell of the myeloid or lymphoid lineages, found in blood or other tissue.
white blood cell
true
leukocyte[accessedResource: CL:0000738][accessDate: 10-05-2010]
white blood cell[accessedResource: CL:0000738][accessDate: 10-05-2010]
immune cell[accessedResource: CL:0000738][accessDate: 10-05-2010]
NCI-H1048
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158584&type=germplasm
CS57560 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158584&type=germplasm
CS57560
James Malone
H0287 is a cell line derived from normal lymphoblastoid cells
H0287
NCI-H1437
James Malone
Ele Holloway
C32TG
James Malone
Ele Holloway
Calu3
James Malone
Ele Holloway
RL952
James Malone
Ele Holloway
MO_841
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#organism_status_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#organism_status_design[accessedResource: MO_841][accessDate: 04-11-2010]
organism status design
Tomasz Adamusiak
birn_anat:birnlex_1362
MA:0000951
hippocampus CA2
Tomasz Adamusiak
NCI-H2347
James Malone
Ele Holloway
NCIt:C25742
The state or condition of having a developing embryo or fetus in the body (uterus), after union of an ovum and spermatozoon, during the period from conception to birth.
The state or condition of having a developing embryo or fetus in the body (uterus), after union of an ovum and spermatozoon, during the period from conception to birth.[accessedResource: NCIt:C25742][accessDate: 04-11-2010]
pregnancy
A thick muscle in the cheek that closes the jaws during chewing.
James Malone
masseter
Masticatory Muscle[accessedResource: NCIt:C13074][accessDate: 04-11-2010]
masseter[accessedResource: BTO:0001755][accessDate: 04-11-2010]
BTO:0001755
Masticatory Muscle
Muscles arising in the zygomatic arch that close the jaw. (MeSH)
NCIt:C13074
A thick muscle in the cheek that closes the jaws during chewing.[accessedResource: BTO:0001755][accessDate: 04-11-2010]
masseter muscle
Masticatory Muscles
Masticatory Muscles[accessedResource: NCIt:C13074][accessDate: 04-11-2010]
Muscles arising in the zygomatic arch that close the jaw. (MeSH)[accessedResource: NCIt:C13074][accessDate: 04-11-2010]
Unspecified osteomyelitis of multiple sites[accessedResource: DOID:1019][accessDate: 04-11-2010]
Osteomyelitis of ankle and/or foot (disorder)
Osteomyelitis of ankle and/or foot (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
osteomyelitis of forearm[accessedResource: DOID:1019][accessDate: 04-11-2010]
Osteomyelitis of multiple sites (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis involving multiple sites
chronic osteomyelitis involving hand[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis involving hand
Unspecified osteomyelitis of multiple sites (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Osteomyelitis of shoulder region (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Osteomyelitis of forearm (disorder)
acute osteomyelitis involving pelvic region and thigh[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis involving ankle and foot[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the lower leg (disorder)
bone infection NOS, of the forearm (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the shoulder region (disorder)
bone infection NOS, of multiple sites (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
osteomyelitis of ankle and foot[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis
chronic osteomyelitis involving pelvic region and thigh[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis involving lower leg
Unspecified osteomyelitis involving multiple sites
osteomyelitis of upper arm[accessedResource: DOID:1019][accessDate: 04-11-2010]
bone infection NOS, of the shoulder region (disorder)
Tomasz Adamusiak
osteomyelitis of hand
osteomyelitis
Osteomyelitis of lower leg (disorder)
acute osteomyelitis of the ankle and foot[accessedResource: DOID:1019][accessDate: 04-11-2010]
bone infection NOS, of the hand (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified infection of bone, lower leg[accessedResource: DOID:1019][accessDate: 04-11-2010]
bone infection NOS, of the hand (disorder)
Unspecified infection of bone, forearm[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified infection of bone, upper arm[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis involving upper arm
Unspecified infection of bone, hand
Unspecified osteomyelitis involving multiple sites[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis involving shoulder region
Unspecified osteomyelitis of the forearm (disorder)
Osteomyelitis of shoulder region (disorder)
osteomyelitis of forearm
Unspecified osteomyelitis of the upper arm (disorder)
chronic osteomyelitis involving shoulder region[accessedResource: DOID:1019][accessDate: 04-11-2010]
osteomyelitis of multiple sites[accessedResource: DOID:1019][accessDate: 04-11-2010]
Osteomyelitis of forearm (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the ankle and foot (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis of ankle and/or foot (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified infection of bone of shoulder region
Osteomyelitis of upper arm (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis of ankle and/or foot (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis of the ankle and foot (disorder)
acute osteomyelitis involving multiple sites
Osteomyelitis of lower leg (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified infection of bone of shoulder region[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis of the ankle and foot (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Osteomyelitis of multiple sites (disorder)
Unspecified infection of bone, hand[accessedResource: DOID:1019][accessDate: 04-11-2010]
osteomyelitis of shoulder region[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis involving lower leg
osteomyelitis of lower leg[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the hand (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified infection of bone, lower leg
Unspecified osteomyelitis of the shoulder region[accessedResource: DOID:1019][accessDate: 04-11-2010]
osteomyelitis of shoulder region
chronic osteomyelitis involving upper arm
acute osteomyelitis involving upper arm[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis involving ankle and foot
Unspecified osteomyelitis of the ankle and foot (disorder)
bone infection NOS, of multiple sites (disorder)
bone infection NOS, of the lower leg (disorder)
Unspecified osteomyelitis of the lower leg (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis involving multiple sites[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified infection of bone, ankle and foot[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the hand
acute osteomyelitis of the ankle and foot
Unspecified infection of bone, forearm
Unspecified osteomyelitis of the shoulder region
Unspecified osteomyelitis of multiple sites
chronic osteomyelitis involving multiple sites[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis involving lower leg[accessedResource: DOID:1019][accessDate: 04-11-2010]
bone infection NOS, of the shoulder region (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis of the ankle and foot (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified infection of bone, ankle and foot
acute osteomyelitis involving ankle and foot
DOID:1019
acute osteomyelitis involving lower leg[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of multiple sites (disorder)
osteomyelitis of ankle and foot
acute osteomyelitis involving ankle and foot[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the ankle and foot
osteomyelitis of multiple sites
acute osteomyelitis involving pelvic region and thigh
Unspecified osteomyelitis of the hand (disorder)
chronic osteomyelitis of the ankle and foot[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the hand[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis involving upper arm[accessedResource: DOID:1019][accessDate: 04-11-2010]
Osteomyelitis of hand (disorder)
bone infection NOS, of the upper arm (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the forearm (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
bone infection NOS, of ankle and foot (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified infection of bone, upper arm
osteomyelitis of lower leg
Osteomyelitis of upper arm (disorder)
acute osteomyelitis[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the ankle and foot[accessedResource: DOID:1019][accessDate: 04-11-2010]
bone infection NOS, of the forearm (disorder)
Unspecified osteomyelitis of the upper arm (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis of the ankle and foot
Osteomyelitis of hand (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
bone infection NOS, of the upper arm (disorder)
Unspecified osteomyelitis of the shoulder region (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis involving shoulder region
acute osteomyelitis involving shoulder region[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis of the ankle and foot (disorder)
acute osteomyelitis of ankle and/or foot (disorder)
acute osteomyelitis involving hand[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis involving hand
bone infection NOS, of the lower leg (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis of ankle and/or foot (disorder)
chronic osteomyelitis involving pelvic region and thigh
acute osteomyelitis
osteomyelitis of hand[accessedResource: DOID:1019][accessDate: 04-11-2010]
bone infection NOS, of ankle and foot (disorder)
osteomyelitis of upper arm
The quality of an organism that has never been sexually active.
virgin
HuPT4
James Malone
Ele Holloway
http://jaxmice.jax.org/strain/009281.html
ILSXISS89/TejJ
Tomasz Adamusiak
James Malone
BTO:0001590
Ele Holloway
Homo sapiens (human) lung; fibroblast; normal cell line. The MRC-5 cell line was derived from normal lung tissue of a 14-week-old male fetus by J.P. Jacobs in September of 1966.[accessedResource: BTO:0001590][accessDate: 04-11-2010]
MRC-5 cell
MRC5 cell[accessedResource: BTO:0001590][accessDate: 04-11-2010]
MRC5 cell
MRC-5 cell[accessedResource: BTO:0001590][accessDate: 04-11-2010]
Homo sapiens (human) lung; fibroblast; normal cell line. The MRC-5 cell line was derived from normal lung tissue of a 14-week-old male fetus by J.P. Jacobs in September of 1966.
MRC5
MRC-5
template RNA
mRNA
An RNA molecule that transfers the coding information for protein synthesis from the chromosomes to the ribosomes mRNA is formed from a DNA template by transcription. It may be a copy of a single gene or of several adjacent genes (polycistronic mRNA). On the ribosome, the sequence is converted into the programmed amino acid sequence through translation.
messenger RNA
striate cortex[accessedResource: MAT:0000509][accessDate: 04-11-2010]
The area of the occipital lobe of the cerebral cortex concerned with vision; it consists of the first visual area or striate c. (Brodmann's area 17) and two other areas, the second visual area or parastriate area (Brodmann's area 18) and the third visual area or peristriate area (Brodmann's area 19).[accessedResource: BTO:0001857][accessDate: 04-11-2010]
visual cortex
Primary visual cortex
MAT:0000509
MA:0000914
striate cortex
BTO:0001857
EV:0100469
FMAID:236871
The area of the occipital lobe of the cerebral cortex concerned with vision; it consists of the first visual area or striate c. (Brodmann's area 17) and two other areas, the second visual area or parastriate area (Brodmann's area 18) and the third visual area or peristriate area (Brodmann's area 19).
James Malone
Progressive muscular dystrophy
GeneRIF:14741210
HERED PROG MUSC DYSTRPHY[accessedResource: ICD9:359.1][accessDate: 04-11-2010]
Myodystrophica
GeneRIF:12654965
GeneRIF:12091319
Hereditary progressive muscular dystrophy NOS (disorder)
Myodystrophicas[accessedResource: MSH:D009136][accessDate: 04-11-2010]
Myodystrophica[accessedResource: MSH:D009136][accessDate: 04-11-2010]
GeneRIF:12798793
Myodystrophicas
Myodystrophy[accessedResource: MSH:D009136][accessDate: 04-11-2010]
A heterogeneous group of inherited MYOPATHIES, characterized by wasting and weakness of the SKELETAL MUSCLE. They are categorized by the sites of MUSCLE WEAKNESS; AGE OF ONSET; and INHERITANCE PATTERNS.[accessedResource: MSH:D009136][accessDate: 04-11-2010]
GeneRIF:16115818
MSH:D009136
GeneRIF:12011280
GeneRIF:12609503
GeneRIF:12145747
MD - Muscular dystrophy
MD - Muscular dystrophy[accessedResource: SNOMEDCT:73297009][accessDate: 04-11-2010]
GeneRIF:12657835
GeneRIF:15221789
GeneRIF:15371336
ICD9:359.1
GeneRIF:16286249
GeneRIF:16130093
Muscular dystrophy NOS[accessedResource: DOID:9884][accessDate: 04-11-2010]
GeneRIF:12189167
HERED PROG MUSC DYSTRPHY
GeneRIF:12783988
A heterogeneous group of inherited MYOPATHIES, characterized by wasting and weakness of the SKELETAL MUSCLE. They are categorized by the sites of MUSCLE WEAKNESS; AGE OF ONSET; and INHERITANCE PATTERNS.
Hereditary progressive muscular dystrophy NOS (disorder)[accessedResource: DOID:9884][accessDate: 04-11-2010]
GeneRIF:16098969
Muscular dystrophy (disorder)[accessedResource: SNOMEDCT:73297009][accessDate: 04-11-2010]
GeneRIF:15833432
GeneRIF:15848172
Hereditary progressive muscular dystrophy NOS[accessedResource: SNOMEDCT:193236007][accessDate: 04-11-2010]
Myodystrophies
GeneRIF:14652796
PMD - Progressive muscular dystrophy
James Malone
Hereditary progressive muscular dystrophy[accessedResource: SNOMEDCT:193225000][accessDate: 04-11-2010]
PMD - Progressive muscular dystrophy[accessedResource: SNOMEDCT:73297009][accessDate: 04-11-2010]
Progressive muscular dystrophy[accessedResource: SNOMEDCT:73297009][accessDate: 04-11-2010]
SNOMEDCT:193236007
GeneRIF:12387816
Hereditary progressive muscular dystrophy
Muscular dystrophy (disorder)
Muscular Dystrophies[accessedResource: MSH:D009136][accessDate: 04-11-2010]
GeneRIF:12736685
GeneRIF:11792810
muscular dystrophy
Hereditary progressive muscular dystrophy NOS
DOID:9884
GeneRIF:15668457
GeneRIF:12196663
GeneRIF:12192640
GeneRIF:12057917
SNOMEDCT:193225000
GeneRIF:14985349
Muscular Dystrophies
SNOMEDCT:73297009
GeneRIF:14512171
Myodystrophy
GeneRIF:16084089
GeneRIF:15365169
GeneRIF:11829483
Hereditary progressive muscular dystrophy (disorder)
Hereditary progressive muscular dystrophy (disorder)[accessedResource: DOID:9884][accessDate: 04-11-2010]
GeneRIF:12609502
Myodystrophies[accessedResource: MSH:D009136][accessDate: 04-11-2010]
Muscular dystrophy, NOS
A dermal neurofibroma is a neurofibroma that occurs in situ of the skin.
dermal neurofibroma
James Malone
TADS:0000245
BTO:0002106
A system of neurons that has the specialized function to produce and secrete hormones, and that constitutes, in whole or in part, an endocrine organ or system.
A system of neurons that has the specialized function to produce and secrete hormones, and that constitutes, in whole or in part, an endocrine organ or system.[accessedResource: BTO:0002106][accessDate: 04-11-2010]
neurohemal organ
James Malone
zebrafish cell line
A mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle. This cell has as part of its cytoplasm myofibrils organized in various patterns.
CL:0000187
myocyte
NIFSTD:sao519252327
A mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle. This cell has as part of its cytoplasm myofibrils organized in various patterns.[accessedResource: CL:0000187][accessDate: 04-11-2010]
Tomasz Adamusiak
James Malone
A mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle.
muscle cell
Mature contractile cells, commonly known as myocytes, that form one of three kinds of muscle. The three types of muscle cells are skeletal (muscle fibers), cardiac (myocytes, cardiac), and smooth (myocytes, smooth muscle). They are derived from embryonic (precursor) muscle cells called myoblasts (MSH).
myocyte[accessedResource: CL:0000187][accessDate: 04-11-2010]
Mature contractile cells, commonly known as myocytes, that form one of three kinds of muscle. The three types of muscle cells are skeletal (muscle fibers), cardiac (myocytes, cardiac), and smooth (myocytes, smooth muscle). They are derived from embryonic (precursor) muscle cells called myoblasts (MSH).[accessedResource: NIFSTD:sao519252327][accessDate: 04-11-2010]
ZFS:0000040
Larval:Days 14-20
Larval:Days 14-20[accessedResource: ZFS:0000040][accessDate: 04-11-2010]
larval day 14-20
James Malone
Polymyositis with skin involvement[accessedResource: DOID:10223][accessDate: 04-11-2010]
[X]Dermatopolymyositis, unspecified (disorder)[accessedResource: SNOMEDCT:203795006][accessDate: 04-11-2010]
SNOMEDCT:396230008
James Malone
Dermatopolymyositis, unspecified
Polymyositis-Dermatomyositides
Childhood Type Dermatomyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
A subacute or chronic inflammatory disease of muscle and skin, marked by proximal muscle weakness and a characteristic skin rash. The illness occurs with approximately equal frequency in children and adults. The skin lesions usually take the form of a purplish rash (or less often an exfoliative dermatitis) involving the nose, cheeks, forehead, upper trunk, and arms. The disease is associated with a complement mediated intramuscular microangiopathy, leading to loss of capillaries, muscle ischemia, muscle-fiber necrosis, and perifascicular atrophy. The childhood form of this disease tends to evolve into a systemic vasculitis. Dermatomyositis may occur in association with malignant neoplasms. (From Adams et al., Principles of Neurology, 6th ed, pp1405-6)
Dermatopolymyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Dermatomyositis (disorder)
Childhood Type Dermatomyositis
GeneRIF:16097959
Adult Type Dermatomyositis
GeneRIF:15146429
Dermatopolymyositis, unspecified (disorder)[accessedResource: DOID:10223][accessDate: 04-11-2010]
ICD9:710.3
A subacute or chronic inflammatory disease of muscle and skin, marked by proximal muscle weakness and a characteristic skin rash. The illness occurs with approximately equal frequency in children and adults. The skin lesions usually take the form of a purplish rash (or less often an exfoliative dermatitis) involving the nose, cheeks, forehead, upper trunk, and arms. The disease is associated with a complement mediated intramuscular microangiopathy, leading to loss of capillaries, muscle ischemia, muscle-fiber necrosis, and perifascicular atrophy. The childhood form of this disease tends to evolve into a systemic vasculitis. Dermatomyositis may occur in association with malignant neoplasms. (From Adams et al., Principles of Neurology, 6th ed, pp1405-6)[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Dermatomyositides, Childhood Type
Wagner-Unverricht syndrome[accessedResource: SNOMEDCT:396230008][accessDate: 04-11-2010]
Dermatomyositides
Dermatopolymyositides
GeneRIF:15752564
Wagner-Unverricht syndrome
dermatomyositis
NCIt:C26744
MSH:D003882
Adult Type Dermatomyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Dermatomyositis, Childhood Type[accessedResource: MSH:D003882][accessDate: 04-11-2010]
DM - Dermatomyositis[accessedResource: SNOMEDCT:396230008][accessDate: 04-11-2010]
Dermatopolymyositis, unspecified[accessedResource: DOID:10223][accessDate: 04-11-2010]
Polymyositis Dermatomyositis[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Polymyositis-Dermatomyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
[X]Dermatopolymyositis, unspecified
SNOMEDCT:203795006
GeneRIF:16047841
GeneRIF:14631123
Dermatopolymyositis, unspecified (disorder)
[X]Dermatopolymyositis, unspecified[accessedResource: SNOMEDCT:203795006][accessDate: 04-11-2010]
DOID:10223
Dermatomyositis (disorder)[accessedResource: SNOMEDCT:396230008][accessDate: 04-11-2010]
Dermatopolymyositis
Dermatomyositides, Adult Type
DM - Dermatomyositis
Dermatomyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Polymyositis with skin involvement
Dermatopolymyositis[accessedResource: MSH:D003882][accessDate: 04-11-2010]
GeneRIF:12147628
[X]Dermatopolymyositis, unspecified (disorder)
Polymyositis Dermatomyositis
Adult Type Dermatomyositis[accessedResource: MSH:D003882][accessDate: 04-11-2010]
surfactants
surface active agent
http://www.ebi.ac.uk/efo/EFO_0001620
A substance which lowers the surface tension of the medium in which it is dissolved, and/or the interfacial tension with other phases, and, accordingly, is positively adsorbed at the liquid/vapour and/or at other interfaces.
surfactant
James Malone
MO_716
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#spectrophotometer
http://www.ebi.ac.uk/efo/EFO_0002024
A spectrophotometer is an instrument that measures the intensity of light as a function of the color, or more specifically, the wavelength of light, transmitted by a substance.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#spectrophotometer[accessedResource: MO_716][accessDate: 04-11-2010]
spectrophotometer
James Malone
[H]C(Cl)(Br)C(F)(F)F
1-bromo-1-chloro-2,2,2-trifluoroethane
InChI=1/C2HBrClF3/c3-1(4)2(5,6)7/h1H
http://www.ebi.ac.uk/efo/EFO_0001550
A haloalkane that has formula C2HBrClF3.
CHEBI:5615
Fluothane
halothane
Rhodialothan
InChIKey=BCQZXOMGPXTTIC-UHFFFAOYAO
bromochlorotrifluoroethane
2,2,2-trifluoro-1-chloro-1-bromoethane
1,1,1-trifluoro-2-chloro-2-bromoethane
2-bromo-2-chloro-1,1,1-trifluoroethane
Narcotane
1,1,1-trifluoro-2-bromo-2-chloroethane
Phthorothanum
C2HBrClF3
James Malone
true
mg/kg
milligram per kilogram
James Malone
2.8
obsolete_colorectal tumor
James Malone
Duplicate with colorectal adenocarcinoma EFO_0000365
SUDHL10
James Malone
Ele Holloway
protocol parameter
monocyte-derived osteoclast
BC-3
James Malone
Ele Holloway
An assay where chromatin immunoprecipitation (ChIP) is used in combination with microarray technology
ChIP-chip by array
long-tailed macaque
crab-eating macaque
http://www.ebi.ac.uk/efo/EFO_0002642
The Crab-eating Macaque (Macaca fascicularis) is a primarily arboreal macaque native to Southeast Asia.
Macaca fascicularis
James Malone
viability
true
An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity.
http://www.ebi.ac.uk/efo/EFO_0001433
A process is an entity that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity during the time it occurs.
process
James Malone
SNU387
James Malone
Ele Holloway
[H]C(=C([H])c1cc(O)cc(O)c1)c1ccc(O)cc1
http://www.ebi.ac.uk/efo/EFO_0002419
resveratrol
3,4',5-Trihydroxystilbene
C14H12O3
A stilbenol that has formula C14H12O3.
CHEBI:27881
Ele Holloway
James Malone
InChI=1/C14H12O3/c15-12-5-3-10(4-6-12)1-2-11-7-13(16)9-14(17)8-11/h1-9,15-17H
5-[2-(4-hydroxyphenyl)ethenyl]benzene-1,3-diol
InChIKey=LUKBXSAWLPMMSZ-UHFFFAOYAJ
mature sperm cell
A mature, haploid male gamete.
male gamete
male gamete[accessedResource: MAT:0000131][accessDate: 04-11-2010]
semen
sperm cell[accessedResource: CL:0000019][accessDate: 04-11-2010]
spermatozoid[accessedResource: ZFA:0009006][accessDate: 04-11-2010]
spermatazoon[accessedResource: MAT:0000131][accessDate: 04-11-2010]
A mature male germ cell that develops from a spermatid.
semen[accessedResource: MAT:0000131][accessDate: 04-11-2010]
sperm cell
CL:0000019
sperm
Definitive germ cell of the male sex.
spermatozoon
spermatozoid
FMAID:67338
FBbt:00004954
SAEL:93
spermatozoon[accessedResource: FBbt:00004954][accessDate: 04-11-2010]
mature sperm cell[accessedResource: MAT:0000131][accessDate: 04-11-2010]
A mature male germ cell that develops from a spermatid.[accessedResource: ZFA:0009006][accessDate: 04-11-2010]
Tomasz Adamusiak
A mature, haploid male gamete.[accessedResource: FBbt:00004954][accessDate: 04-11-2010]
ZFA:0009006
WBbt:0005321
MAT:0000131
James Malone
spermatazoon
MA:0002765
CROAP-5
CROAP5
James Malone
Ele Holloway
MO_893
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#curator
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#curator[accessedResource: MO_893][accessDate: 04-11-2010]
curator
Tomasz Adamusiak
James Malone
A GM19240 is a cell line.
A GM19240 is all of the following: something that has as quality a female, something that derives from a Homo sapiens, and something that derives from a b cell.
GM19240
Natural Language Generator 8th April 2010
paraventricular nucleus
James Malone
Ele Holloway
CL:0000055
non-terminally differentiated cell
A precursor cell with a limited number of potential fates.
non-terminally differentiated cell[accessedResource: CL:0000055][accessDate: 04-11-2010]
A precursor cell with a limited number of potential fates.[accessedResource: CL:0000055][accessDate: 04-11-2010]
blast cell
Tomasz Adamusiak
MAT:0000098
FMAID:50801
MA:0000168
CNS
The part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube.
* Subdivision of neuraxis that consists of neural tissue (which is organized into gray matter and white matter) and the cerebral ventricular system (cavity of organ part); it is embryologically derived from the rostral part of the neural tube; together with the spinal cord, the brain constitutes the organ neuraxis. Examples: There is only one brain. (UWDA) * That part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube. Functions include muscle control and coordination, sensory reception and integration, speech production, memory storage, and the elaboration of thought and emotions. (NCI) * The part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube. (MSH) * portion of the vertebrate central nervous system that is enclosed within the cranium, continuous with the spinal cord, and composed of gray matter and white matter; the primary center for the regulation and control of bodily activities, receiving and interpreting sensory impulses, and transmitting information to the muscles and body organs; also the seat of consciousness, thought, memory, and emotion; includes the functionally similar portion of the invertebrate nervous system. (CSP)[accessedResource: NIFSTD:birnlex_796][accessDate: 04-11-2010]
synganglion
NCIt:C12439
TAO:0000008
adult brain[accessedResource: FBbt:00003624][accessDate: 04-11-2010]
NIFSTD:birnlex_796
An organ composed of grey and white matter containing billions of neurons that is the center for intelligence and reasoning. It is protected by the bony cranium.
The central nervous system is that part of the nervous system that consists of the brain and spinal cord. The central nervous system (CNS) is one of the two major divisions of the nervous system. The other is the peripheral nervous system (PNS) which is outside the brain and spinal cord.[accessedResource: BTO:0000227][accessDate: 04-11-2010]
An organ composed of grey and white matter containing billions of neurons that is the center for intelligence and reasoning. It is protected by the bony cranium.[accessedResource: NCIt:C12439][accessDate: 04-11-2010]
Tomasz Adamusiak
EV:0100164
James Malone
TADS:0000188
SAEL:12
Nervous System, Brain
WBbt:0005440
CNS[accessedResource: BTO:0000227][accessDate: 04-11-2010]
FBbt:00003624
The part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube.
* Subdivision of neuraxis that consists of neural tissue (which is organized into gray matter and white matter) and the cerebral ventricular system (cavity of organ part); it is embryologically derived from the rostral part of the neural tube; together with the spinal cord, the brain constitutes the organ neuraxis. Examples: There is only one brain. (UWDA) * That part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube. Functions include muscle control and coordination, sensory reception and integration, speech production, memory storage, and the elaboration of thought and emotions. (NCI) * The part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube. (MSH) * portion of the vertebrate central nervous system that is enclosed within the cranium, continuous with the spinal cord, and composed of gray matter and white matter; the primary center for the regulation and control of bodily activities, receiving and interpreting sensory impulses, and transmitting information to the muscles and body organs; also the seat of consciousness, thought, memory, and emotion; includes the functionally similar portion of the invertebrate nervous system. (CSP)
brain
brain structure
synganglion[accessedResource: MAT:0000098][accessDate: 04-11-2010]
Cavitated compound organ which is comprised of gray and white matter and surrounds the cerebral ventricular system.[accessedResource: TAO:0000008][accessDate: 04-11-2010]
adult brain
central nervous system
EHDAA:2641
MFO:0002240
Nervous System, Brain[accessedResource: NCIt:C12439][accessDate: 04-11-2010]
Segment of neuraxis that has as its parts gray matter and white matter that surround the cerebral ventricular system; Examples: There is only one brain.
The central nervous system is that part of the nervous system that consists of the brain and spinal cord. The central nervous system (CNS) is one of the two major divisions of the nervous system. The other is the peripheral nervous system (PNS) which is outside the brain and spinal cord.
brain structure[accessedResource: ZFA:0000008][accessDate: 04-11-2010]
ZFA:0000008
BTO:0000227
central nervous system[accessedResource: BTO:0000227][accessDate: 04-11-2010]
Cavitated compound organ which is comprised of gray and white matter and surrounds the cerebral ventricular system.
http://en.wikipedia.org/wiki/Protein_microarray
Helen Parkinson
protein binding array
A protein array is an array which provides a multiplex approach to identify protein-protein interactions, to identify the substrates of protein kinases, to identify transcription factor protein-activation, or to identify the targets of biologically active small molecules. The array is a substrate (e.g. glass) on which different molecules of protein or specific DNA binding sequences (as capture probes for the proteins) have been affixed at separate locations in an ordered manner thus forming a microscopic array. The most common protein microarray is the antibody microarray, where antibodies are spotted onto the protein chip and are used as capture molecules to detect proteins from cell lysate solutions.
protein array
MSH:D013920
primary Thrombocytosis[accessedResource: DOID:2224][accessDate: 04-11-2010]
NCIt:C3407
Thrombocythemias, Essential[accessedResource: MSH:D013920][accessDate: 04-11-2010]
Essential Thrombocytemia
Thrombocythemias, Primary
Essential thrombocythaemia (disorder)[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
Thrombocythemia, Hemorrhagic[accessedResource: MSH:D013920][accessDate: 04-11-2010]
[M]Idiopathic thrombocythaemia[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
Essential Thrombocytemia[accessedResource: NCIt:C3407][accessDate: 04-11-2010]
GeneRIF:12091373
Thrombocythemias, Idiopathic
Essential haemorrhagic thrombocythaemia
Essential thrombocytosis (disorder)
Essential (hemorrhagic) thrombocythemia
Essential thrombocythemia (clinical)
Essential thrombocythemia (clinical disorder)
A chronic myeloproliferative disorder that involves primarily the megakaryocytic lineage. It is characterized by sustained thrombocytosis in the blood, increased numbers of large, mature megakaryocytes in the bone marrow, and episodes of thrombosis and/or hemorrhage. The cause is unknown. Median survival times of 10-15 years are commonly reported. (WHO, 2001)
Essential haemorrhagic thrombocythaemia[accessedResource: SNOMEDCT:128844009][accessDate: 04-11-2010]
Idiopathic haemorrhagic thrombocythaemia
A chronic myeloproliferative neoplasm that involves primarily the megakaryocytic lineage. It is characterized by sustained thrombocytosis in the blood, increased numbers of large, mature megakaryocytes in the bone marrow, and episodes of thrombosis and/or hemorrhage. The cause is unknown. Median survival times of 10-15 years are commonly reported. (WHO, 2008)
A chronic myeloproliferative and megakaryocytic tumor and thrombocytosis that is a rare chronic disorder that results_in the overproduction of platelets.
DOID:2224
Thrombocythemias, Idiopathic[accessedResource: MSH:D013920][accessDate: 04-11-2010]
Essential thrombocythaemia[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
Idiopathic thrombocythaemia
Essential thrombocythemia (clinical)[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
[M]Idiopathic thrombocythemia
Essential thrombocytosis (disorder)[accessedResource: DOID:2224][accessDate: 04-11-2010]
Essential thrombocythaemia (clinical)[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
GeneRIF:14764528
GeneRIF:12221665
[M]Idiopathic thrombocythaemia
Essential thrombocytosis[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
Essential thrombocythaemia (disorder)
Essential thrombocythemia (clinical disorder)[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
idiopathic thrombocythemia[accessedResource: DOID:2224][accessDate: 04-11-2010]
A chronic myeloproliferative neoplasm that involves primarily the megakaryocytic lineage. It is characterized by sustained thrombocytosis in the blood, increased numbers of large, mature megakaryocytes in the bone marrow, and episodes of thrombosis and/or hemorrhage. The cause is unknown. Median survival times of 10-15 years are commonly reported. (WHO, 2008)[accessedResource: NCIt:C3407][accessDate: 04-11-2010]
Idiopathic hemorrhagic thrombocythemia[accessedResource: SNOMEDCT:128844009][accessDate: 04-11-2010]
GeneRIF:12377969
GeneRIF:11860444
Essential hemorrhagic thrombocythemia[accessedResource: SNOMEDCT:128844009][accessDate: 04-11-2010]
A clinical syndrome characterized by repeated spontaneous hemorrhages and a remarkable increase in the number of circulating platelets.
Thrombocythemia, Primary[accessedResource: MSH:D013920][accessDate: 04-11-2010]
Essential Thrombocytosis
Thrombocythemias, Primary[accessedResource: MSH:D013920][accessDate: 04-11-2010]
GeneRIF:12010817
Essential thrombocythemia (morphologic abnormality)
Essential Thrombocythemias
Thrombocythemia, Primary
GeneRIF:14966468
GeneRIF:15837627
A chronic myeloproliferative and megakaryocytic tumor and thrombocytosis that is a rare chronic disorder that results_in the overproduction of platelets.[accessedResource: DOID:2224][accessDate: 04-11-2010]
Idiopathic hemorrhagic thrombocythemia
Essential thrombocythaemia (clinical)
SNOMEDCT:128844009
Essential thrombocythaemia (clinical disorder)
A clinical syndrome characterized by repeated spontaneous hemorrhages and a remarkable increase in the number of circulating platelets.[accessedResource: MSH:D013920][accessDate: 04-11-2010]
Idiopathic haemorrhagic thrombocythaemia[accessedResource: SNOMEDCT:128844009][accessDate: 04-11-2010]
Hemorrhagic Thrombocythemias
GeneRIF:12756017
idiopathic thrombocythemia
[M]Idiopathic thrombocythemia[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
essential thrombocythemia
Idiopathic thrombocythaemia[accessedResource: DOID:2224][accessDate: 04-11-2010]
Idiopathic thrombocythemia (disorder)
Essential thrombocythemia (morphologic abnormality)[accessedResource: SNOMEDCT:128844009][accessDate: 04-11-2010]
Primary Thrombocytosis
James Malone
GeneRIF:11891801
Idiopathic thrombocythemia (disorder)[accessedResource: DOID:2224][accessDate: 04-11-2010]
Essential thrombocythaemia (clinical disorder)[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
Hemorrhagic Thrombocythemias[accessedResource: MSH:D013920][accessDate: 04-11-2010]
Essential thrombocythemia (disorder)
Essential thrombocythemia (disorder)[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
Hemorrhagic Thrombocythemia
SNOMEDCT:109994006
Essential thrombocythaemia
topoisomerase I inhibitors
http://www.ebi.ac.uk/efo/EFO_0001886
CHEBI:50276
An inhibitor of bacterial enzymes of the DNA topoisomerases, Type I class that catalyze ATP-independent breakage of one of the two strands of DNA, passage of the unbroken strand through the break, and rejoining of the broken strand. These bacterial enzymes reduce the topological stress in the DNA structure by relaxing negatively, but not positively, supercoiled DNA.
topoisomerase I inhibitor
James Malone
true
weight-weight percentage
w/w
mass percentage
A dimensionless concentration unit which denotes the mass of a substance in a mixture as a percentage of the mass of the entire mixture.
mass percent
http://www.ebi.ac.uk/efo/EFO_0001820
CHEBI:23366
compatible osmolytes
James Malone
NCI-H82
James Malone
Ele Holloway
MAT:0000207
FBbt:00005137
Any of a number of aggregations of neurons, glial cells and their processes, and surrounded by a glial cell and connective tissue sheath (plural: ganglia).
James Malone
Any of a number of aggregations of neurons, glial cells and their processes, and surrounded by a glial cell and connective tissue sheath (plural: ganglia).[accessedResource: FBbt:00005137][accessDate: 04-11-2010]
ganglion[accessedResource: FBbt:00005137][accessDate: 04-11-2010]
Any of a number of aggregations of neurons, glial cells and their processes, surrounded by a glial cell and connective tissue sheath (plural: ganglia).
ganglion
invertebrate ganglion
tyrosine kinase inhibitors
protein tyrosine kinase inhibitor
http://www.ebi.ac.uk/efo/EFO_0001870
CHEBI:38637
tyrosine kinase inhibitor
James Malone
EV:0100020
EHDAA:1900
Cavitated compound organ that receives blood flow from the atrium and delivers blood to the body via the aorta. Valves are present to direct flow. There are only two chambers present in the fish heart.
Ventricles, Heart[accessedResource: NCIt:C12730][accessDate: 04-11-2010]
MAT:0000497
ZFA:0000009
The lower right and left chambers of the heart. The right pumps venous blood into the lungs and the left pumps oxygenated blood into the systemic arterial circulation. (MeSH)[accessedResource: NCIt:C12730][accessDate: 04-11-2010]
heart ventricle
FMAID:82553
Ventricles, Heart
NCIt:C12730
MA:0000091
ventricle
cardiac ventricle
Ventricle[accessedResource: FMAID:82553][accessDate: 04-11-2010]
Cardiac Ventricles[accessedResource: NCIt:C12730][accessDate: 04-11-2010]
Cardiac Ventricles
One of four heart chambers.[accessedResource: TAO:0000009][accessDate: 04-11-2010]
MFO:0080920
The lower right and left chambers of the heart. The right pumps venous blood into the lungs and the left pumps oxygenated blood into the systemic arterial circulation. (MeSH)
A chamber of the heart which receives blood from a corresponding atrium and from which blood is forced into the arteries.
heart ventricle[accessedResource: BTO:0000862][accessDate: 04-11-2010]
One of four heart chambers.
General anatomical term which refers to a chamber of an organ with cavitated organ parts. Examples: right ventricle of heart, lateral ventricle of brain.
EMAPA:17331
Tomasz Adamusiak
BTO:0000862
A chamber of the heart which receives blood from a corresponding atrium and from which blood is forced into the arteries.[accessedResource: BTO:0000862][accessDate: 04-11-2010]
Cavitated compound organ that receives blood flow from the atrium and delivers blood to the body via the aorta. Valves are present to direct flow. There are only two chambers present in the fish heart.[accessedResource: ZFA:0000009][accessDate: 04-11-2010]
TAO:0000009
true
For example, the role of a person as a surgeon, the role of an artificial heart in pumping blood, the role of a chemical compound in an experiment, the role of a drug in the treatment of a disease.
A realizable entity [snap:RealizableEntity] the manifestation of which brings about some result or end that is not essential to a continuant [snap:Continuant] in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant [snap:Continuant] in some kinds of natural, social or institutional contexts.
http://www.ebi.ac.uk/efo/EFO_0001440
A role is an entity which is borne in a material entity in some kinds of natural, social or institutional contexts, but which is not essential to the fundamental definition of that material entity (i.e. the material entity exists with or without the role). For example, the role of a person as a surgeon, the role of an artificial heart in pumping blood, the role of a chemical compound in an experiment, the role of a drug in the treatment of a disease.
role
James Malone
NCIt:C12366
FMAID:30317
osseous tissue[accessedResource: BTO:0000140][accessDate: 04-11-2010]
Connective tissue that forms the skeletal components of the body.[accessedResource: NCIt:C12366][accessDate: 04-11-2010]
Connective tissue that forms the skeletal components of the body.
Portion of tissue which is calcified connective tissue making up the structural elements of the skeletal system.
BTO:0000140
James Malone
Osseous[accessedResource: NCIt:C12366][accessDate: 04-11-2010]
bone
Bones[accessedResource: NCIt:C12366][accessDate: 04-11-2010]
Osseous
The hard form of connective tissue that constitutes the majority of the skeleton of most vertebrates; it consists of an organic component (the cells and matrix) and an inorganic, or mineral, component; the matrix contains a framework of collagenous fibers and is impregnated with the mineral component, chiefly calcium phosphate (85 per cent) and calcium carbonate (10 per cent), which imparts the quality of rigidity to bone.
MAT:0000299
XAO:0000169
Bones
Portion of tissue which is calcified connective tissue making up the structural elements of the skeletal system.[accessedResource: TAO:0001514][accessDate: 04-11-2010]
The hard form of connective tissue that constitutes the majority of the skeleton of most vertebrates; it consists of an organic component (the cells and matrix) and an inorganic, or mineral, component; the matrix contains a framework of collagenous fibers and is impregnated with the mineral component, chiefly calcium phosphate (85 per cent) and calcium carbonate (10 per cent), which imparts the quality of rigidity to bone.[accessedResource: BTO:0000140][accessDate: 04-11-2010]
SAEL:10
osseous tissue
TAO:0001514
EV:0100140
teratozoospermia
Ele Holloway
teratospermia
presence of structurally anomalous spermatozoa in the semen; malformations include the physical bending of the sperm to produce kinks or bends
MP:0005578
Tomasz Adamusiak
presence of structurally anomalous spermatozoa in the semen; malformations include the physical bending of the sperm to produce kinks or bends[accessedResource: MP:0005578][accessDate: 04-11-2010]
teratospermia[accessedResource: MP:0005578][accessDate: 04-11-2010]
GeneRIF:15894926
Colonic Adenocarcinoma
GeneRIF:14666619
true
adenocarcinoma of colon
Colonic adenocarcinoma[accessedResource: DOID:234][accessDate: 10-05-2010]
GeneRIF:15546874
GeneRIF:15161648
adenocarcinoma of colon[accessedResource: DOID:234][accessDate: 10-05-2010]
GeneRIF:12918105
NCIt:C4349
An adenocarcinoma arising from the colon. It is more frequently seen in populations with a Western type diet and in patients with a history of chronic inflammatory bowel disease. Signs and symptoms include intestinal bleeding, anemia, and change in bowel habits. According to the degree of cellular differentiation, colonic adenocarcinomas are divided into well differentiated, moderately, and poorly differentiated. Morphologic variants include the mucinous adenocarcinoma and signet-ring adenocarcinoma. Lymphatic or hematogenous spread can occur early in the process and lead to systemic disease.
James Malone
GeneRIF:15517914
GeneRIF:15069532
GeneRIF:12019353
GeneRIF:15526283
obsolete_colon adenocarcinoma
GeneRIF:12878221
An adenocarcinoma arising from the colon. It is more frequently seen in populations with a Western type diet and in patients with a history of chronic inflammatory bowel disease. Signs and symptoms include intestinal bleeding, anemia, and change in bowel habits. According to the degree of cellular differentiation, colonic adenocarcinomas are divided into well differentiated, moderately, and poorly differentiated. Morphologic variants include the mucinous adenocarcinoma and signet-ring adenocarcinoma. Lymphatic or hematogenous spread can occur early in the process and lead to systemic disease.[accessedResource: NCIt:C4349][accessDate: 10-05-2010]
Use http://www.ebi.ac.uk/efo/EFO_0000365 colorectal adenocarcinoma
adenocarcinoma of the colon
DOID:234
GeneRIF:15865210
adenocarcinoma of the colon[accessedResource: DOID:234][accessDate: 10-05-2010]
GeneRIF:12383707
2.6.1
GeneRIF:11731423
MAT:0000402
child
child[accessedResource: MAT:0000402][accessDate: 04-11-2010]
XAO:1000010
juvenile stage
James Malone
young adult[accessedResource: MAT:0000402][accessDate: 04-11-2010]
EV:0300051
young adult
NIFSTD:sao676858164
A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast).
Non-striated, elongated, spindle-shaped cells found lining the digestive tract, uterus, and blood vessels. They are derived from specialized myoblasts (myoblasts, smooth muscle) (MSH).[accessedResource: NIFSTD:sao676858164][accessDate: 04-11-2010]
smooth muscle fiber
A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast).[accessedResource: CL:0000192][accessDate: 04-11-2010]
Non-striated, elongated, spindle-shaped cells found lining the digestive tract, uterus, and blood vessels. They are derived from specialized myoblasts (myoblasts, smooth muscle) (MSH).
non-striated muscle cell[accessedResource: NIFSTD:sao676858164][accessDate: 04-11-2010]
CL:0000192
Tomasz Adamusiak
smooth muscle fiber[accessedResource: CL:0000192][accessDate: 04-11-2010]
smooth muscle cell
non-striated muscle cell
James Malone
NCIt:C43423
conditioned mesenchymal stem cell
mesenchymal stem cell
James Malone
CHEBI:22707
benzenetriol
http://www.ebi.ac.uk/efo/EFO_0001665
benzenetriols
James Malone
CHEBI:22978
cadmium molecular entity
cadmium molecular entities
http://www.ebi.ac.uk/efo/EFO_0001497
cadmium compounds
NCI-H2170
James Malone
Ele Holloway
N-(1,2,3,10-tetramethoxy-9-oxo-5,6,7,9-tetrahydrobenzo[a]heptalen-7-yl)acetamide
colchicine
C22H25NO6
COC1=CC=C2C(=CC1=O)C(CCc3cc(OC)c(OC)c(OC)c23)NC(C)=O
http://www.ebi.ac.uk/efo/EFO_0001512
InChI=1/C22H25NO6/c1-12(24)23-16-8-6-13-10-19(27-3)21(28-4)22(29-5)20(13)14-7-9-18(26-2)17(25)11-15(14)16/h7,9-11,16H,6,8H2,1-5H3,(H,23,24)/f/h23H
CHEBI:23359
InChIKey=IAKHMKGGTNLKSZ-MPIMZMORCX
A carbotricyclic compound that has formula C22H25NO6.
(22R,23R)-2alpha,3alpha,22,23-tetrahydroxy-7a-homo-7-oxa-5alpha-campestan-6-one
C28H48O6
A brassinosteroid that has formula C28H48O6.
http://www.ebi.ac.uk/efo/EFO_0002401
InChI=1/C28H48O6/c1-14(2)15(3)24(31)25(32)16(4)18-7-8-19-17-13-34-26(33)21-11-22(29)23(30)12-28(21,6)20(17)9-10-27(18,19)5/h14-25,29-32H,7-13H2,1-6H3/t15-,16-,17-,18+,19-,20-,21+,22-,23+,24+,25+,27+,28+/m0/s1
(22R,23R)-2alpha,3alpha,22,23-tetrahydroxy-6,7-seco-5alpha-campestano-6,7-lactone
CHEBI:28277
brassinolide
Ele Holloway
[H][C@@]1(CC[C@@]2([H])[C@]3([H])COC(=O)[C@@]4([H])C[C@H](O)[C@H](O)C[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)[C@@H](O)[C@H](O)[C@@H](C)C(C)C
A 2alpha-hydroxy steroid that has formula C28H48O6.
InChIKey=IXVMHGVQKLDRKH-KNBKMWSGBW
James Malone
JAR
James Malone
Ele Holloway
Syndrome, Sjogren's
NCIt:C26883
Sjogren syndrome
An autoimmune disorder affecting the salivary and lacrimal glands. Morphologically, it is characterized by the presence of lymphocytic and plasmacytic infiltrates which cause destruction of these glands. It results in dry mouth and dry eyes. It may be associated with the presence of other autoimmune disorders, including rheumatoid arthritis and lupus erythematosus.[accessedResource: NCIt:C26883][accessDate: 04-11-2010]
Sjogren's syndrome (disorder)[accessedResource: SNOMEDCT:83901003][accessDate: 04-11-2010]
Sicca (Sjogren's) syndrome[accessedResource: DOID:12894][accessDate: 04-11-2010]
Sjögren's disease
SNOMEDCT:83901003
Sicca syndrome (disorder)[accessedResource: DOID:12894][accessDate: 04-11-2010]
Sjogren's disease[accessedResource: DOID:12894][accessDate: 04-11-2010]
Sjögren's disease[accessedResource: SNOMEDCT:83901003][accessDate: 04-11-2010]
Mikulicz disease
Chronic inflammatory and autoimmune disease in which the salivary and lacrimal glands undergo progressive destruction by lymphocytes and plasma cells resulting in decreased production of saliva and tears. The primary form, often called sicca syndrome, involves both KERATOCONJUNCTIVITIS SICCA and XEROSTOMIA. The secondary form includes, in addition, the presence of a connective tissue disease, usually rheumatoid arthritis.
Sjögren's syndrome (disorder)
Sicca syndrome
Sjogren's syndrome (disorder)
DOID:12894
Sicca syndrome (disorder)
xerodermosteosis
Sjögren syndrome
Sjögren's syndrome[accessedResource: SNOMEDCT:83901003][accessDate: 04-11-2010]
An autoimmune disorder affecting the salivary and lacrimal glands. Morphologically, it is characterized by the presence of lymphocytic and plasmacytic infiltrates which cause destruction of these glands. It results in dry mouth and dry eyes. It may be associated with the presence of other autoimmune disorders, including rheumatoid arthritis and lupus erythematosus.
Sjogren's syndrome[accessedResource: SNOMEDCT:83901003][accessDate: 04-11-2010]
Sjgren's syndrome (disorder)[accessedResource: DOID:12894][accessDate: 04-11-2010]
Sjogrens Syndrome
Sjögren's syndrome
Sjgren's syndrome (disorder)
MSH:D012859
Sjogren's disease
Sjögren's syndrome (disorder)[accessedResource: SNOMEDCT:83901003][accessDate: 04-11-2010]
Sjogrens Syndrome[accessedResource: MSH:D012859][accessDate: 04-11-2010]
James Malone
Sicca (Sjogren's) syndrome
Chronic inflammatory and autoimmune disease in which the salivary and lacrimal glands undergo progressive destruction by lymphocytes and plasma cells resulting in decreased production of saliva and tears. The primary form, often called sicca syndrome, involves both KERATOCONJUNCTIVITIS SICCA and XEROSTOMIA. The secondary form includes, in addition, the presence of a connective tissue disease, usually rheumatoid arthritis.[accessedResource: MSH:D012859][accessDate: 04-11-2010]
Sicca syndrome[accessedResource: SNOMEDCT:83901003][accessDate: 04-11-2010]
xerodermosteosis[accessedResource: DOID:12894][accessDate: 04-11-2010]
Sjögren syndrome[accessedResource: SNOMEDCT:83901003][accessDate: 04-11-2010]
birnlex_7077
Theiler stage 22
Tomasz Adamusiak
Jie Zheng
FBbt:00005538
ClyP2
ClyP2[accessedResource: FBbt:00005538][accessDate: 04-11-2010]
clypeo-labral primordium
James Malone
Ele Holloway
JURKAT cell
JM cell
Human T cell leukemia, established from the peripheral blood of a 14-year-old boy with acute lymphoblastic leukemia (ALL) at first relapse in 1976; often this cell line is called "JM (JURKAT and JM are derived from the same patient and are sister clones), occasionally JM may be a subclone with somewhat divergent features.[accessedResource: BTO:0000661][accessDate: 10-05-2010]
true
BTO:0000661
JM cell[accessedResource: BTO:0000661][accessDate: 10-05-2010]
Duplicate with EFO_0002796
2.2
JM
JURKAT cell[accessedResource: BTO:0000661][accessDate: 10-05-2010]
James Malone
obsolete_Jurkat
Human T cell leukemia, established from the peripheral blood of a 14-year-old boy with acute lymphoblastic leukemia (ALL) at first relapse in 1976; often this cell line is called "JM (JURKAT and JM are derived from the same patient and are sister clones), occasionally JM may be a subclone with somewhat divergent features.
Any of the colorless weakly motile cells originating from stem cells and differentiating in lymphoid tissue (as of the thymus or bone marrow) that are the typical cellular elements of lymph, include the cellular mediators of immunity, and constitute 20 to 30 percent of the white blood cells of normal human blood.[accessedResource: BTO:0000775][accessDate: 04-11-2010]
lymphocyte
A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin.[accessedResource: CL:0000542][accessDate: 04-11-2010]
Any of the colorless weakly motile cells originating from stem cells and differentiating in lymphoid tissue (as of the thymus or bone marrow) that are the typical cellular elements of lymph, include the cellular mediators of immunity, and constitute 20 to 30 percent of the white blood cells of normal human blood.
James Malone
CL:0000542
BTO:0000775
A cell of the B cell, T cell, or natural killer cell lineage.
A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin.
3-Indolylessigsaeure
A member of the indole-3-acetic acids that has formula C10H9NO2.
C10H9NO2
James Malone
http://www.ebi.ac.uk/efo/EFO_0001556
heteroauxin
(indol-3-yl)acetic acid
1H-indol-3-ylacetic acid
OC(=O)Cc1c[nH]c2ccccc12
Indoleacetic acid
InChI=1/C10H9NO2/c12-10(13)5-7-6-11-9-4-2-1-3-8(7)9/h1-4,6,11H,5H2,(H,12,13)/f/h12H
CHEBI:16411
2-(indol-3-yl)ethanoic acid
IAA
An indole-3-acetic acid that has formula C10H9NO2.
InChIKey=SEOVTRFCIGRIMH-XWKXFZRBCL
indole-3-acetic acid
IES
time to development of distant metastases
James Malone
CEMC1
Ele Holloway
James Malone
Caco-2
James Malone
polycythemia vera
Tomasz Adamusiak
James Malone
NCIt:C32231
BTO:0001845
bronchial epithelium
James Malone
UBERON:0001083
ventricular myocardium
Tomasz Adamusiak
NCIt:C55427
Memory Impairment Adverse Event
Memory Impairment Adverse Event[accessedResource: NCIt:C55427][accessDate: 04-11-2010]
memory impairment
James Malone
http://en.wikipedia.org/wiki/Rhesus_Macaque
Rhesus Macaque
http://www.ebi.ac.uk/efo/EFO_0002643
The Rhesus Macaque (Macaca mulatta), often called the Rhesus Monkey, is one of the best known species of Old World monkeys.
Macaca mulatta
James Malone
SKMEL5
James Malone
Ele Holloway
James Malone
Population Study
NCIt:C15716
Population Study[accessedResource: NCIt:C15716][accessDate: 04-11-2010]
Multidisciplinary study done at the population level or among the population groups, generally to find the cause, incidence or spread of the disease or to see the response to the treatment, nutrition or environment.[accessedResource: NCIt:C15716][accessDate: 04-11-2010]
Multidisciplinary study done at the population level or among the population groups, generally to find the cause, incidence or spread of the disease or to see the response to the treatment, nutrition or environment.
population based study
Tomasz Adamusiak
NCIt:C61257
A group of mostly autosomal recessive inherited neurodegenerative disorders characterized by accumulation of lipofuscin in the neuronal cells and in other tissues including liver, spleen, kidneys, and myocardium. Signs and symptoms include motor disturbances and cognitive decline.
A group of mostly autosomal recessive inherited neurodegenerative disorders characterized by accumulation of lipofuscin in the neuronal cells and in other tissues including liver, spleen, kidneys, and myocardium. Signs and symptoms include motor disturbances and cognitive decline.[accessedResource: NCIt:C61257][accessDate: 04-11-2010]
neuronal ceroid lipofuscinosis
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158594&type=germplasm
CS57570 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158594&type=germplasm
CS57570
James Malone
PMID: 12753
972h- is a yeast strain as described in article PMID 12753
972h-
James Malone
HCC1159
James Malone
NIFSTD:sao1703115805
MAT:0000484
lung apical
Apical is a geometric modifier describing the tip of a pyramidal or rounded structure. For example, lung apical.
apical
Tomasz Adamusiak
James Malone
NCI-H2126
James Malone
Ele Holloway
suprachiasmatic nucleus
James Malone
Ele Holloway
urocortin I
JCRB0137
RERF-LC-KJ
James Malone
Ele Holloway
Myxoid Liposarcomas
Myxoliposarcoma[accessedResource: SNOMEDCT:27849002][accessDate: 04-11-2010]
The most common type of liposarcoma. It is composed of round to oval mesenchymal cells, small signet ring lipoblasts, and a rich network of capillaries in a myxoid stroma.
Myxoid liposarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:27849002][accessDate: 04-11-2010]
A liposarcoma containing myxomatous tissue. (Dorland, 27th ed)[accessedResource: MSH:D018208][accessDate: 04-11-2010]
SNOMEDCT:404069006
A liposarcoma containing myxomatous tissue. (Dorland, 27th ed)
Myxoid liposarcoma (disorder)[accessedResource: SNOMEDCT:404069006][accessDate: 04-11-2010]
Myxoliposarcoma
Tomasz Adamusiak
SNOMEDCT:27849002
Myxoid liposarcoma (disorder)
NCIt:C3735
The most common type of liposarcoma. It is composed of round to oval mesenchymal cells, small signet ring lipoblasts, and a rich network of capillaries in a myxoid stroma.[accessedResource: NCIt:C3735][accessDate: 04-11-2010]
Liposarcomas, Myxoid[accessedResource: MSH:D018208][accessDate: 04-11-2010]
DOID:5363
myxoid liposarcoma
Myxoid liposarcoma (morphologic abnormality)
MSH:D018208
GeneRIF:12915480
RGD:10044
NIFSTD:birnlex_320
Wistar
Tomasz Adamusiak
James Malone
12-Tetradecanoylphorbol 13-acetate
phorbol 13-acetate 12-myristate
A phorbol ester that has formula C36H56O8.
12-O-Tetradecanoylphorbol 13-acetate
C36H56O8
InChI=1/C36H56O8/c1-7-8-9-10-11-12-13-14-15-16-17-18-29(39)43-32-24(3)35(42)27(30-33(5,6)36(30,32)44-25(4)38)20-26(22-37)21-34(41)28(35)19-23(2)31(34)40/h19-20,24,27-28,30,32,37,41-42H,7-18,21-22H2,1-6H3/t24-,27+,28-,30-,32-,34-,35-,36-/m1/s1
CHEBI:37537
phorbol 12-tetradecanoate 13-acetate
[H][C@@]12C=C(CO)C[C@]3(O)C(=O)C(C)=C[C@@]3([H])[C@@]1(O)[C@H](C)[C@@H](OC(=O)CCCCCCCCCCCCC)[C@]1(OC(C)=O)[C@@]2([H])C1(C)C
http://www.ebi.ac.uk/efo/EFO_0002493
InChIKey=PHEDXBVPIONUQT-RGYGYFBIBK
PMA
(1aR,1bS,4aR,7aS,7bS,8R,9R,9aS)-9a-acetoxy-4a,7b-dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1a,1b,4,4a,5,7a,7b,8,9,9a-decahydro-1H-cyclopropa[3,4]benzo[1,2-e]azulen-9-yl tetradecanoate
James Malone
Ele Holloway
tetradecanoylphorbol acetate
RWPE1
Ele Holloway
James Malone
TT3E
James Malone
Ele Holloway
MO_568
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#stimulus_or_stress_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#stimulus_or_stress_design[accessedResource: MO_568][accessDate: 04-11-2010]
stimulus or stress design
Tomasz Adamusiak
MO_179
VolumeUnit
VolumeUnitOther[accessedResource: MO_155][accessDate: 04-11-2010]
Tomasz Adamusiak
VolumeUnit[accessedResource: MO_179][accessDate: 04-11-2010]
James Malone
MO_155
A derived unit which is a standard measure of the amount of space occupied by any substance, whether solid, liquid, or gas.
volume unit
VolumeUnitOther
http://www.ebi.ac.uk/efo/EFO_0001711
A volume unit is a derived unit which is a standard measure of the amount of space occupied by any substance, whether solid, liquid, or gas.
true
Jie Zheng
true
Medial geniculate nuclei
Medial geniculate complex[accessedResource: FMA:62211][accessDate: 10-05-2010]
Medial geniculate body
James Malone
Medial geniculate body[accessedResource: FMA:62211][accessDate: 10-05-2010]
Medial geniculate nuclei[accessedResource: FMA:62211][accessDate: 10-05-2010]
FMA:62211
Medial geniculate complex
Medial geniculate nucleus
1.6
obsolete_medial geniculate nucleus
Duplication: use class EFO_0001968
Medial geniculate nucleus[accessedResource: FMA:62211][accessDate: 10-05-2010]
A fat body is an insect gland dorsal to the insect gut, with a function analogous to that of the vertebrate liver. It is a storage organ for fats, glycogen and protein and is a major site of intermediary metabolism.[accessedResource: TGMA:0001856][accessDate: 04-11-2010]
A fat body is an insect gland dorsal to the insect gut, with a function analogous to that of the vertebrate liver. It is a storage organ for fats, glycogen and protein and is a major site of intermediary metabolism.
An invertebrate tissue which serves as a store of lipids and in nwhich a great deal of catabolic and anabolic activity occurs
.
TGMA:0001856
.[accessedResource: FBbt:00005066][accessDate: 04-11-2010]
TADS:0000321
MAT:0000096
fat body
An invertebrate tissue which serves as a store of lipids and in nwhich a great deal of catabolic and anabolic activity occurs[accessedResource: MAT:0000096][accessDate: 04-11-2010]
fat body sensu invertebrata
FBbt:00005066
fat body[accessedResource: TGMA:0001856][accessDate: 04-11-2010]
James Malone
Leprosy, Cutaneous[accessedResource: MSH:D015440][accessDate: 04-11-2010]
LL - Full lepromatous leprosy[accessedResource: SNOMEDCT:21560005][accessDate: 04-11-2010]
Lepromatous leprosy [type L]
Full lepromatous leprosy
Leprosy, Nodular[accessedResource: MSH:D015440][accessDate: 04-11-2010]
Cutaneous Leprosies[accessedResource: MSH:D015440][accessDate: 04-11-2010]
A chronic communicable infection which is a principal or polar form of LEPROSY. This disorder is caused by MYCOBACTERIUM LEPRAE and produces diffuse granulomatous skin lesions in the form of nodules, macules, or papules. The peripheral nerves are involved symmetrically and neural sequelae occur in the advanced stage.[accessedResource: MSH:D015440][accessDate: 04-11-2010]
Leprosy, Cutaneous
Lepromatous leprosy (disorder)[accessedResource: SNOMEDCT:21560005][accessDate: 04-11-2010]
GeneRIF:15726416
James Malone
Leprosies, Nodular[accessedResource: MSH:D015440][accessDate: 04-11-2010]
Type LL leprosy
Type L leprosy[accessedResource: SNOMEDCT:21560005][accessDate: 04-11-2010]
ICD9:030.0
Lepromatous leprosy [type L][accessedResource: DOID:10887][accessDate: 04-11-2010]
Nodular Leprosy
Lepromatous leprosy (disorder)
Leprosies, Cutaneous
LL - Full lepromatous leprosy
GeneRIF:12743658
Leprosies, Nodular
Lepromatous Leprosies[accessedResource: MSH:D015440][accessDate: 04-11-2010]
Lepromatous Leprosies
SNOMEDCT:21560005
GeneRIF:12445799
Type LL leprosy[accessedResource: SNOMEDCT:21560005][accessDate: 04-11-2010]
lepromatous leprosy
MSH:D015440
DOID:10887
A chronic communicable infection which is a principal or polar form of LEPROSY. This disorder is caused by MYCOBACTERIUM LEPRAE and produces diffuse granulomatous skin lesions in the form of nodules, macules, or papules. The peripheral nerves are involved symmetrically and neural sequelae occur in the advanced stage.
Type L leprosy
Full lepromatous leprosy[accessedResource: SNOMEDCT:21560005][accessDate: 04-11-2010]
CL:0000080
A cell which moves among different tissues of the body, via blood, lymph, or other medium.
A cell which moves among different tissues of the body, via blood, lymph, or other medium.[accessedResource: CL:0000080][accessDate: 04-11-2010]
circulating cell
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0001535
2-phenyl-4H-benzopyran-4-one
2-phenyl-4H-1-benzopyran-4-one
A flavone that has formula C15H10O2.
A member of the flavones that has formula C15H10O2.
CHEBI:42491
2-phenyl-gamma-benzopyrone
C15H10O2
Flavon
O=c1cc(oc2ccccc12)-c1ccccc1
InChIKey=VHBFFQKBGNRLFZ-UHFFFAOYAG
2-phenyl-4H-chromen-4-one
InChI=1/C15H10O2/c16-13-10-15(11-6-2-1-3-7-11)17-14-9-5-4-8-12(13)14/h1-10H
flavone
2-phenylchromone
true
A derived unit which is a standard measure of the mass of a homogeneous substance containing 6.02 x 1023 atoms or molecules.
molar mass unit
James Malone
HCC3153
FMAID:3884
Distal portion of anterior descending branch of left coronary artery
Distal portion of anterior descending branch of left coronary artery[accessedResource: FMAID:3884][accessDate: 04-11-2010]
distal portion of anterior interventricular branch of left coronary artery
Tomasz Adamusiak
Jie Zheng
1.8
true
ArrayExpress production team
An experiment in which re-sequencing technology (Solexa/454) is used to generate sequence which can be used to determine nucleic acid sequence, analyse the transcibed regions of the genome, or to quantitate transcript abundance
obsolete_re-sequencing
James Malone
Split into two terms. RNA-seq and DNA-seq
GeneRIF:12131767
DOID:13315
Recurrent pancreatitis (disorder)
Relapsing pancreatitis[accessedResource: SNOMEDCT:234689009][accessDate: 04-11-2010]
Relapsing pancreatitis
SNOMEDCT:235494005
GeneRIF:14657708
INFLAMMATION of the PANCREAS that is characterized by recurring or persistent ABDOMINAL PAIN with or without STEATORRHEA or DIABETES MELLITUS. It is characterized by the irregular destruction of the pancreatic parenchyma which may be focal, segmental, or diffuse.
GeneRIF:11950817
ICD9:577.1
Recurrent pancreatitis (disorder)[accessedResource: SNOMEDCT:233870001][accessDate: 04-11-2010]
Relapsing pancreatitis (disorder)[accessedResource: DOID:13315][accessDate: 04-11-2010]
GeneRIF:15097871
Pancreatitis, recurrent
GeneRIF:12647793
GeneRIF:15855826
chronic pancreatitis (disorder)[accessedResource: DOID:13315][accessDate: 04-11-2010]
GeneRIF:15097853
Relapsing pancreatitis (disorder)
GeneRIF:12142743
GeneRIF:15802940
SNOMEDCT:233870001
CP - Chronic pancreatitis
MSH:D050500
GeneRIF:15749232
GeneRIF:12808117
INFLAMMATION of the PANCREAS that is characterized by recurring or persistent ABDOMINAL PAIN with or without STEATORRHEA or DIABETES MELLITUS. It is characterized by the irregular destruction of the pancreatic parenchyma which may be focal, segmental, or diffuse.[accessedResource: MSH:D050500][accessDate: 04-11-2010]
SNOMEDCT:234689009
chronic pancreatitis (disorder) [Ambiguous]
CP - chronic pancreatitis[accessedResource: DOID:13315][accessDate: 04-11-2010]
chronic pancreatitis (disorder) [Ambiguous][accessedResource: DOID:13315][accessDate: 04-11-2010]
James Malone
Pancreatitis, recurrent[accessedResource: DOID:13315][accessDate: 04-11-2010]
Chronic pancreatitis (disorder)
GeneRIF:15066699
chronic pancreatitis
pancreatic acinus[accessedResource: BTO:0000028][accessDate: 04-11-2010]
CL:0000083
An epithelial cell of the pancreas.
epithelial cell of exocrine pancreas
BTO:0000028
Cells of the pancreas that secrete digestive enzymes, the archetypal secretory cell upon which much of the early work on the sequence of events in the secretory process was done.[accessedResource: BTO:0000028][accessDate: 04-11-2010]
An epithelial cell of the pancreas.[accessedResource: CL:0000083][accessDate: 04-11-2010]
epithelial cell of exocrine pancreas[accessedResource: CL:0000083][accessDate: 04-11-2010]
Cells of the pancreas that secrete digestive enzymes, the archetypal secretory cell upon which much of the early work on the sequence of events in the secretory process was done.
epithelial cell of pancreas
pancreatic acinar cell[accessedResource: BTO:0000028][accessDate: 04-11-2010]
exocrine pancreas cell
pancreatic acinar cell
pancreatic acinus
Tomasz Adamusiak
epithelial cell of pancreas[accessedResource: CL:0000083][accessDate: 04-11-2010]
Jie Zheng
http://www.informatics.jax.org/searches/reference.cgi?7550
C57BL/10 is a mouse strain as described in Jackson Laboratory http://www.informatics.jax.org/searches/reference.cgi?7550
C57BL/10
James Malone
cleavage stage
James Malone
Ethylol
Alkohol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-1
Tecsol C
Ethyl Alcohol & Water, 70%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Hydroxide[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
hydroxyethane
Synasol
Anhydrol
Alcare Hand Degermer[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
HSDB 531[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol, Denatured[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethanol Extra Pure
Alcohol Anhydrous[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Caswell No, 426
Etanolo
Tecsol
Ethanol 200 Proof[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Cd-10
Beta-Ethanolamine
Ethanol Absolute Bp
Denatured Alcohol Sd-1[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Cd-5[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 50%
Ethyl Alcohol & Water, 96%
Tomasz Adamusiak
Ethyl Hydroxide
Ethylolamine[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethanol, Spirit[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Tecsol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
spiritus vini
Beta-Aminoethyl Alcohol
Ethyl Alcohol & Water, 80%
Beta-Hydroxyethylamine[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
James Malone
ETA
Jaysol S[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
HSDB 531
Pyro[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
NIFSTD:nlx_chem_20090205
Glycinol
InChIKey=LFQSCWFLJHTTHZ-UHFFFAOYAB
alcohol etilico
Ethyl Alcohol & Water, 50%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Thanol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Beta-Hydroxyethylamine
Envision Conditioner Pdd 9020[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
etanol
Denatured Alcohol Sd-23a[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-13a[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-39c
Ethanol, Spirit
Alcohol, Diluted
A clear, colorless liquid rapidly absorbed from the gastrointestinal tract and distributed throughout the body. It has bactericidal activity and is used often as a topical disinfectant. It is widely used as a solvent and preservative in pharmaceutical preparations as well as serving as the primary ingredient in alcoholic beverages. (PubChem) Pharmacology: Alcohol produces injury to cells by dehydration and precipitation of the cytoplasm or protoplasm. This accounts for its bacteriocidal and antifungal action. When alcohol is injected in close proximity to nerve tissues, it produces neuritis and nerve degeneration (neurolysis). Ninety to 98% of ethanol that enters the body is completely oxidized. Ethanol is also used as a cosolvent to dissolve many insoluble drugs and to serve as a mild sedative in some medicinal formulations. Mechanism of action: The sedative effects of ethanol are mediated through binding to GABA receptors and glycine receptors (alpha 1 and alpha 2 subunits). In its role as an anti-infective, ethanol acts as an osmolyte or dehydrating agent that disrupts the osmotic balance across cell membranes. Drug type: Approved. Small Molecule. Drug category: Anti-Infective Agents, Local. Central Nervous System Depressants. Disinfectants. Solvents[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Alkohol
Ethyl Alcohol & Water, 5%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Jaysol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Aethylalkohol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-39c[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
ethanol
Jaysol S
Alcohol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 10%
Etanolo[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Alcohol, Dehydrated
USAF EK-1597
Ethyl Alcohol & Water, 40%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 30%
Alcool Etilico
An ethanol that has formula C2H6O.
Alcohol Anhydrous
Beta-Aminoethyl Alcohol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Anhydrol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Dehydrated Ethanol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Ethanol
Colamine[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
C2H5OH
Jaysol
Thanol
Ethyl Alcohol, Anhydrous[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethanol 200 Proof
Ethyl Alcohol & Water, 20%
Beta-Ethanolamine[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Absolute Ethanol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethanol Anhydrous[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Algrain[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-17
Caswell No, 426[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
InChI=1/C2H6O/c1-2-3/h3H,2H2,1H3
Ethyl Alcohol & Water, 40%
Ethylolamine
Aminoethanol
Ethanol Absolute Bp[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
alcool ethylique
Alcool Etilico[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0001531
[CH2Me(OH)]
Thiofaco M-50[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Alcare Hand Degermer
Ethyl Alcohol & Water, 70%
Pyro
Glycinol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Absolute Alcohol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Aethanol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 95%
Ethyl Hydrate[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethanol, Silent Spirit[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 96%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
CCO
Ethylol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-3a
Denatured Alcohol Cd-5a
Ethyl Alcohol
Ethyl Alcohol Anhydrous
Thiofaco M-50
A member of the ethanols that has formula C2H6O.
Denatured Ethanol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol
Aminoethanol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Colamine
Denatured Alcohol Sd-39b[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 5%
Ethyl Hydrate
EtOH
Denatured Alcohol Cd-5a[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-17[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Aethanol
Denatured Alcohol Cd-10[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
ETA[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 20%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 10%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethanol Anhydrous
Reagent Alcohol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Aethylalkohol
USAF EK-1597[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 30%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-28
Ethanol Extra Pure[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Alcool Ethylique[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
[OEtH]
EtOH[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-3a[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 80%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-28[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
C2H6O
Beta-Aminoethanol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Algrain
Alcohol, Dehydrated[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Alcohol, Diluted[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Synasol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 95%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-39b
Denatured Alcohol Cd-5
A clear, colorless liquid rapidly absorbed from the gastrointestinal tract and distributed throughout the body. It has bactericidal activity and is used often as a topical disinfectant. It is widely used as a solvent and preservative in pharmaceutical preparations as well as serving as the primary ingredient in alcoholic beverages. (PubChem) Pharmacology: Alcohol produces injury to cells by dehydration and precipitation of the cytoplasm or protoplasm. This accounts for its bacteriocidal and antifungal action. When alcohol is injected in close proximity to nerve tissues, it produces neuritis and nerve degeneration (neurolysis). Ninety to 98% of ethanol that enters the body is completely oxidized. Ethanol is also used as a cosolvent to dissolve many insoluble drugs and to serve as a mild sedative in some medicinal formulations. Mechanism of action: The sedative effects of ethanol are mediated through binding to GABA receptors and glycine receptors (alpha 1 and alpha 2 subunits). In its role as an anti-infective, ethanol acts as an osmolyte or dehydrating agent that disrupts the osmotic balance across cell membranes. Drug type: Approved. Small Molecule. Drug category: Anti-Infective Agents, Local. Central Nervous System Depressants. Disinfectants. Solvents
Methylcarbinol
Beta-Aminoethanol
Alcohol
Reagent Alcohol
Ethanol Absolute
Tecsol C[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Methylcarbinol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol, Denatured
Envision Conditioner Pdd 9020
Denatured Alcohol Sd-13a
Denatured Alcohol Sd-23a
Dehydrated ethanol
Absolute Alcohol
Ethanol, Silent Spirit
1-hydroxyethane
NCIt:C85864
Infantile neuronal ceroid lipofuscinosis in which the signs and symptoms appear later in life.
Infantile neuronal ceroid lipofuscinosis in which the signs and symptoms appear later in life.[accessedResource: NCIt:C85864][accessDate: 04-11-2010]
late infantile neuronal ceroid lipofuscinosis
Tomasz Adamusiak
GeneRIF:12736724
GeneRIF:15140234
GeneRIF:15827341
GeneRIF:12239452
GeneRIF:15572761
GeneRIF:15150307
GeneRIF:11962515
A malignant, usually aggressive tumor composed of atypical, neoplastic melanocytes. Most often, melanomas arise in the skin (cutaneous melanomas) and include the following histologic subtypes: superficial spreading melanoma, nodular melanoma, acral lentiginous melanoma, and lentigo maligna melanoma. Cutaneous melanomas may arise from acquired or congenital melanocytic or dysplastic nevi. Melanomas may also arise in other anatomic sites including the gastrointestinal system, eye, urinary tract, and reproductive system. Melanomas frequently metastasize to lymph nodes, liver, lungs, and brain.[accessedResource: NCIt:C3224][accessDate: 04-11-2010]
GeneRIF:12459645
Malignant melanoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:2092003][accessDate: 04-11-2010]
GeneRIF:15833878
GeneRIF:15547691
Malignant melanoma (morphologic abnormality)
GeneRIF:15208686
Malignant melanoma, NOS[accessedResource: SNOMEDCT:2092003][accessDate: 04-11-2010]
GeneRIF:14991539
GeneRIF:12243754
GeneRIF:15073111
GeneRIF:14719109
GeneRIF:14713106
GeneRIF:15161053
Malignant Melanoma[accessedResource: NCIt:C3224][accessDate: 04-11-2010]
GeneRIF:15146471
GeneRIF:12482591
Naevocarcinoma
GeneRIF:12189238
GeneRIF:12230496
GeneRIF:12704387
GeneRIF:15592448
GeneRIF:14666660
GeneRIF:15024080
GeneRIF:11992541
GeneRIF:15716025
GeneRIF:11992548
GeneRIF:15466193
malignant melanoma (disorder)
GeneRIF:12939282
GeneRIF:15210734
[M]Malignant melanoma NOS[accessedResource: SNOMEDCT:269503007][accessDate: 04-11-2010]
GeneRIF:15998788
GeneRIF:11809675
Malignant melanoma, no ICD-O subtype[accessedResource: SNOMEDCT:2092003][accessDate: 04-11-2010]
GeneRIF:12183361
malignant melanoma, morphology (morphologic abnormality)[accessedResource: DOID:1909][accessDate: 04-11-2010]
GeneRIF:15848191
GeneRIF:15184373
GeneRIF:15856458
GeneRIF:12789289
GeneRIF:12759390
GeneRIF:14695152
GeneRIF:14727087
GeneRIF:15724013
malignant melanoma NOS (morphologic abnormality)[accessedResource: DOID:1909][accessDate: 04-11-2010]
GeneRIF:11828258
GeneRIF:12072543
GeneRIF:12014625
GeneRIF:12665595
GeneRIF:15607961
GeneRIF:14646619
GeneRIF:12198771
GeneRIF:15855653
GeneRIF:15753377
GeneRIF:12894561
GeneRIF:11801603
GeneRIF:12140376
GeneRIF:14732231
GeneRIF:16272362
GeneRIF:11830592
GeneRIF:15856464
GeneRIF:15897876
GeneRIF:15093732
GeneRIF:12702150
GeneRIF:15809735
GeneRIF:12777976
GeneRIF:12170182
GeneRIF:16129781
GeneRIF:15277467
SNOMEDCT:372244006
GeneRIF:15362372
GeneRIF:12619120
GeneRIF:12028585
GeneRIF:15856016
GeneRIF:15386421
GeneRIF:12208877
GeneRIF:15313890
GeneRIF:15782137
GeneRIF:15608673
Melanosarcoma[accessedResource: SNOMEDCT:372244006][accessDate: 04-11-2010]
GeneRIF:15009102
GeneRIF:12783933
GeneRIF:16189525
GeneRIF:16021575
GeneRIF:12516095
GeneRIF:14581607
GeneRIF:14618632
GeneRIF:14583455
[M]Malignant melanoma NOS (morphologic abnormality)
GeneRIF:12682852
GeneRIF:15694309
GeneRIF:14961576
GeneRIF:11828253
GeneRIF:15998953
GeneRIF:14555513
GeneRIF:12655789
GeneRIF:12883362
GeneRIF:16040804
GeneRIF:12376466
GeneRIF:12067988
GeneRIF:12218055
GeneRIF:12230495
GeneRIF:12439754
GeneRIF:14508519
GeneRIF:15492811
GeneRIF:12168790
GeneRIF:12538712
GeneRIF:15714116
malignant melanoma (disorder)[accessedResource: DOID:1909][accessDate: 04-11-2010]
GeneRIF:12068308
MM - Malignant melanoma[accessedResource: SNOMEDCT:2092003][accessDate: 04-11-2010]
GeneRIF:12821780
Malignant melanoma, NOS
GeneRIF:12060397
GeneRIF:12631591
GeneRIF:12750156
GeneRIF:11844832
GeneRIF:16232302
GeneRIF:15140228
GeneRIF:15014019
GeneRIF:12021307
GeneRIF:11807902
GeneRIF:11822878
GeneRIF:12018852
GeneRIF:15107545
GeneRIF:15161700
GeneRIF:16354196
Melanosarcoma
GeneRIF:14500642
GeneRIF:15009703
GeneRIF:11828257
GeneRIF:15187113
Malignant Melanoma
GeneRIF:16081848
GeneRIF:12606943
GeneRIF:15814740
GeneRIF:15832175
GeneRIF:12777979
GeneRIF:15373782
GeneRIF:12696065
GeneRIF:12124804
GeneRIF:12618768
Malignant melanoma, no ICD-O subtype (morphologic abnormality)
GeneRIF:15743794
GeneRIF:14559981
GeneRIF:10449755
GeneRIF:12017286
MSH:D008545
GeneRIF:16103065
GeneRIF:15491322
GeneRIF:12706526
GeneRIF:11500805
GeneRIF:12454511
GeneRIF:16277028
GeneRIF:12823444
GeneRIF:11891198
SNOMEDCT:2092003
GeneRIF:16140982
GeneRIF:15383569
GeneRIF:12058259
GeneRIF:15834638
GeneRIF:12710945
GeneRIF:15149859
GeneRIF:15001714
GeneRIF:15993843
GeneRIF:15305155
GeneRIF:12161512
GeneRIF:15009726
GeneRIF:12459643
GeneRIF:12082534
GeneRIF:14675203
GeneRIF:16211213
GeneRIF:15714119
GeneRIF:12972299
GeneRIF:12490317
GeneRIF:14729600
GeneRIF:12080186
A malignant neoplasm derived from cells that are capable of forming melanin, which may occur in the skin of any part of the body, in the eye, or, rarely, in the mucous membranes of the genitalia, anus, oral cavity, or other sites. It occurs mostly in adults and may originate de novo or from a pigmented nevus or malignant lentigo. Melanomas frequently metastasize widely, and the regional lymph nodes, liver, lungs, and brain are likely to be involved. The incidence of malignant skin melanomas is rising rapidly in all parts of the world. (Stedman, 25th ed; from Rook et al., Textbook of Dermatology, 4th ed, p2445)[accessedResource: MSH:D008545][accessDate: 04-11-2010]
[M]Malignant melanoma NOS
GeneRIF:12533668
GeneRIF:11930117
Melanoma, NOS
GeneRIF:12096926
GeneRIF:12459646
GeneRIF:15024700
GeneRIF:15064726
GeneRIF:15026369
GeneRIF:15265913
GeneRIF:12445207
GeneRIF:15645118
GeneRIF:14630948
GeneRIF:15851010
GeneRIF:15328193
GeneRIF:15305164
GeneRIF:12074634
GeneRIF:14522897
GeneRIF:16098042
GeneRIF:12485936
GeneRIF:12209993
melanoma
NCIt:C3224
GeneRIF:12362978
GeneRIF:12140380
GeneRIF:15009721
GeneRIF:15557124
GeneRIF:15843590
GeneRIF:15564140
GeneRIF:15721302
GeneRIF:12920221
GeneRIF:15832174
GeneRIF:15373802
GeneRIF:14506702
GeneRIF:12235125
GeneRIF:16007121
GeneRIF:11936276
GeneRIF:12230498
GeneRIF:15955107
GeneRIF:12095976
GeneRIF:16098052
GeneRIF:15373781
GeneRIF:12875987
MM - Malignant melanoma
GeneRIF:15551350
GeneRIF:12670917
GeneRIF:15373779
GeneRIF:15843517
GeneRIF:12036934
GeneRIF:15305193
GeneRIF:15210957
GeneRIF:15191558
Melanomas[accessedResource: MSH:D008545][accessDate: 04-11-2010]
A malignant neoplasm derived from cells that are capable of forming melanin, which may occur in the skin of any part of the body, in the eye, or, rarely, in the mucous membranes of the genitalia, anus, oral cavity, or other sites. It occurs mostly in adults and may originate de novo or from a pigmented nevus or malignant lentigo. Melanomas frequently metastasize widely, and the regional lymph nodes, liver, lungs, and brain are likely to be involved. The incidence of malignant skin melanomas is rising rapidly in all parts of the world. (Stedman, 25th ed; from Rook et al., Textbook of Dermatology, 4th ed, p2445)
Naevocarcinoma[accessedResource: DOID:1909][accessDate: 04-11-2010]
GeneRIF:14612926
GeneRIF:12716902
GeneRIF:12883368
GeneRIF:11918086
GeneRIF:12883358
Malignant melanoma, morphology (morphologic abnormality)
GeneRIF:15201995
GeneRIF:12687014
GeneRIF:12384558
GeneRIF:12950144
GeneRIF:11962738
GeneRIF:12072536
GeneRIF:15610525
GeneRIF:11992404
GeneRIF:14726258
GeneRIF:15832775
GeneRIF:15179189
GeneRIF:15880589
GeneRIF:12664607
GeneRIF:15201991
GeneRIF:15257316
GeneRIF:15781639
GeneRIF:12140383
GeneRIF:12855667
GeneRIF:12810628
GeneRIF:15816840
Melanomas
GeneRIF:12140378
GeneRIF:15610528
GeneRIF:11839575
GeneRIF:12927791
GeneRIF:15688405
GeneRIF:16008690
GeneRIF:15366927
Melanoma, NOS[accessedResource: SNOMEDCT:2092003][accessDate: 04-11-2010]
GeneRIF:12850810
GeneRIF:15009731
GeneRIF:11884449
GeneRIF:15987741
GeneRIF:12208865
GeneRIF:15577328
GeneRIF:15869411
GeneRIF:12848854
James Malone
GeneRIF:14757863
GeneRIF:12670907
Melanomas, Malignant[accessedResource: MSH:D008545][accessDate: 04-11-2010]
GeneRIF:14634801
GeneRIF:12438452
GeneRIF:15014028
GeneRIF:15273735
GeneRIF:12839565
[M]Malignant melanoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:269503007][accessDate: 04-11-2010]
GeneRIF:15817166
GeneRIF:15469480
GeneRIF:15657897
GeneRIF:14735200
DOID:1909
GeneRIF:14585195
GeneRIF:15999103
GeneRIF:12530093
GeneRIF:11812790
GeneRIF:11996105
GeneRIF:14602237
GeneRIF:12107107
GeneRIF:12296515
GeneRIF:12170178
GeneRIF:15760339
GeneRIF:15955106
GeneRIF:12920225
GeneRIF:12777984
GeneRIF:15166498
SNOMEDCT:269503007
GeneRIF:14676121
GeneRIF:15907783
GeneRIF:12747754
GeneRIF:15649154
GeneRIF:15509546
GeneRIF:15618925
GeneRIF:15024079
GeneRIF:15009113
GeneRIF:14704859
GeneRIF:14962105
GeneRIF:15577313
Melanomas, Malignant
GeneRIF:12086670
GeneRIF:12650606
GeneRIF:12949795
GeneRIF:15557758
Malignant melanoma (morphologic abnormality)[accessedResource: SNOMEDCT:2092003][accessDate: 04-11-2010]
GeneRIF:16033529
GeneRIF:12793438
GeneRIF:12405287
GeneRIF:15880581
GeneRIF:15743795
GeneRIF:12366697
GeneRIF:14999777
Malignant melanoma, no ICD-O subtype
GeneRIF:15179190
GeneRIF:15610524
GeneRIF:15133491
GeneRIF:12729801
GeneRIF:15305153
GeneRIF:14632199
GeneRIF:15634901
GeneRIF:11500806
GeneRIF:11959101
GeneRIF:12950721
GeneRIF:15979576
GeneRIF:15983061
GeneRIF:12958194
malignant melanoma NOS (morphologic abnormality)
A malignant, usually aggressive tumor composed of atypical, neoplastic melanocytes. Most often, melanomas arise in the skin (cutaneous melanomas) and include the following histologic subtypes: superficial spreading melanoma, nodular melanoma, acral lentiginous melanoma, and lentigo maligna melanoma. Cutaneous melanomas may arise from acquired or congenital melanocytic or dysplastic nevi. Melanomas may also arise in other anatomic sites including the gastrointestinal system, eye, urinary tract, and reproductive system. Melanomas frequently metastasize to lymph nodes, liver, lungs, and brain.
GeneRIF:12538723
GeneRIF:15897908
GeneRIF:16234564
GeneRIF:15330192
GeneRIF:12824159
GeneRIF:14696968
GeneRIF:12684636
GeneRIF:15009718
GeneRIF:15991050
GeneRIF:15221796
GeneRIF:12170183
GeneRIF:11781826
GeneRIF:12650602
GeneRIF:15299072
GeneRIF:12115481
GeneRIF:12579526
GeneRIF:14744083
GeneRIF:15475451
GeneRIF:15492257
GeneRIF:15009714
TIVE is a human cell line.
TIVE
James Malone
Ele Holloway
MO_726
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#injury_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#injury_design[accessedResource: MO_726][accessDate: 04-11-2010]
injury design
Tomasz Adamusiak
ZFS:0000021
gastrula 90%-epiboly
James Malone
house mouse
http://www.ebi.ac.uk/efo/EFO_0001993
Mus musculus
James Malone
GM18507
Natural Language Generator 8th April 2010
James Malone
A GM18507 is a cell line.
A GM18507 is all of the following: something that has as quality a male, something that derives from a Homo sapiens, and something that derives from a lymphoblast.
639V
James Malone
Ele Holloway
PATO:0001323
An area is a size quality which describes the two dimensional extent of a material entity.
A 2-D extent quality inhering in a bearer by virtue of the bearer's two dimensional extent.
A 2-D extent quality inhering in a bearer by virtue of the bearer's two dimensional extent.[accessedResource: PATO:0001323][accessDate: 04-11-2010]
area
James Malone
vasodilator agents
vasodilator
http://www.ebi.ac.uk/efo/EFO_0001848
CHEBI:35620
A drug used to cause dilation of the blood vessels.
vasodilator agent
James Malone
SAEL:115
Urinary bladder
MA:0000380
James Malone
A membranous sac in animals that serves as the receptacle of a liquid or contains gas.[accessedResource: BTO:0000123][accessDate: 04-11-2010]
bladder
Urinary System, Bladder[accessedResource: NCIt:C12414][accessDate: 04-11-2010]
Organ with organ cavity which is continuous proximally with the right and left ureters and distally with the urethra. Examples: There is only one urinary bladder.
Urinary System, Bladder
MAT:0000122
EV:0100098
A membranous sac in animals that serves as the receptacle of a liquid or contains gas.
The distensible sac-like organ that functions as a reservoir of urine, collecting from the kidneys and eliminating via the urethra.[accessedResource: NCIt:C12414][accessDate: 04-11-2010]
urinary bladder[accessedResource: MAT:0000122][accessDate: 04-11-2010]
BTO:0000123
The distensible sac-like organ that functions as a reservoir of urine, collecting from the kidneys and eliminating via the urethra.
XAO:0000154
NCIt:C12414
FMAID:15900
EHDAA:9328
AAO:0000623
EMAPA:18321
Germplasm:4652085
SALK_049497 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=germplasm&id=4652085
SALK_049497
James Malone
anticolinergicos
acetylcholine receptor antagonist
anticholinergic agents
James Malone
agent anticholinergique
cholinergic antagonist
cholinergic-blocking agents
anticholinergics
anticholinergiques
agente anticolinergico
Anticholinergika
acetylcholine antagonists
CHEBI:48873
agentes anticolinergicos
Anticholinergikum
http://www.ebi.ac.uk/efo/EFO_0001880
Any drug that binds to but does not activate cholinergic receptors, thereby blocking the actions of acetylcholine or cholinergic agonists.
SKNEP1
Ele Holloway
James Malone
InChI=1/Cu
copper atom
Kupfer
Cu
http://www.ebi.ac.uk/efo/EFO_0002406
cuivre
29Cu
Ele Holloway
cuprum
A copper group element atom that has formula Cu.
A copper group element that has formula Cu.
James Malone
InChIKey=RYGMFSIKBFXOCR-UHFFFAOYAN
copper
cobre
CHEBI:28694
C15H10O2
CHEBI:18220
isoflavone
InChIKey=GOMNOOKGLZYEJT-UHFFFAOYAO
3-Phenylchromone
3-phenyl-4H-1-benzopyran-4-one
O=c1c(coc2ccccc12)-c1ccccc1
3-phenyl-4H-chromen-4-one
An isoflavone that has formula C15H10O2.
InChI=1/C15H10O2/c16-15-12-8-4-5-9-14(12)17-10-13(15)11-6-2-1-3-7-11/h1-10H
A member of the isoflavones that has formula C15H10O2.
http://www.ebi.ac.uk/efo/EFO_0001558
Isoflavon
CHEBI:50527
arsenic oxide
http://www.ebi.ac.uk/efo/EFO_0002004
arsenic oxides
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158774&type=germplasm
CS57750 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158774&type=germplasm
CS57750
James Malone
James Malone
CCRFCEM
Ele Holloway
BTO:0000470
A bud that will develop into a flower.
A bud that will develop into a flower.[accessedResource: BTO:0000470][accessDate: 04-11-2010]
flower bud
James Malone
FMAID:87180
yolk sac
Tomasz Adamusiak
A microscopy assay is an assay that provides images of molecules at various resolution depending on the technology used.
microscopy assay
James Malone
Flora Logan
James Malone
Ele Holloway
CN1CCCC1c1cccnc1
(RS)-nicotine
CHEBI:18723
Nikotin
A pyrrolidine alkaloid that has formula C10H14N2.
InChIKey=SNICXCGAKADSCV-UHFFFAOYAX
nicotine
InChI=1/C10H14N2/c1-12-7-3-5-10(12)9-4-2-6-11-8-9/h2,4,6,8,10H,3,5,7H2,1H3
C10H14N2
3-(1-methylpyrrolidin-2-yl)pyridine
http://www.ebi.ac.uk/efo/EFO_0002415
Nicotin
COLO357
James Malone
Ele Holloway
FBbt:00004905
CL:0000579
border cell
border cell[accessedResource: FBbt:00004905][accessDate: 04-11-2010]
border follicle cell
Tomasz Adamusiak
Any cell line that is derived from the prostate.
prostate derived cell line
James Malone
FMAID:7196
EV:0100055
SAEL:101
BTO:0001281
James Malone
MFO:0003100
spleen
ZFA:0000436
XAO:0000328
MA:0000141
A highly vascular ductless organ that is located in the left abdominal region near the stomach or intestine of most vertebrates and is concerned with final destruction of red blood cells, filtration and storage of blood, and production of lymphocytes.[accessedResource: BTO:0001281][accessDate: 04-11-2010]
TAO:0000436
MAT:0000085
EMAPA:18767
A highly vascular ductless organ that is located in the left abdominal region near the stomach or intestine of most vertebrates and is concerned with final destruction of red blood cells, filtration and storage of blood, and production of lymphocytes.
James Malone
http://www.ebi.ac.uk/efo/EFO_0001710
unified atomic mass unit
u
true
An independently to the base SI units defined mass unit which is equal to one twelfth of the mass of an unbound atom of the carbon-12 nuclide, at rest and in its ground state.
Da
UO:0000221
dalton
A dalton is a mass unit is an independent unit to the base SI units and is equal to one twelfth of the mass of an unbound atom of the carbon-12 nuclide, at rest and in its ground state.
Antimanic drugs are agents used to treat bipolar disorders or mania associated with other affective disorders.
CHEBI:35477
antimanics
antimanic agent
James Malone
antimanic drugs
antimanic drug
http://www.ebi.ac.uk/efo/EFO_0001840
FMAID:9462
The middle and thickest layer of the heart wall, composed of cardiac muscle.
The principal muscle tissue of the vertebrate heart made up of striated fibers that appear to be separated from each other under the electron microscope but that function in long-term rhythmic contraction as if in protoplasmic continuity.[accessedResource: BTO:0000199][accessDate: 04-11-2010]
Heart muscle
XAO:0000065
ZFA:0001319
cardiac muscle[accessedResource: ZFA:0001319][accessDate: 04-11-2010]
cardiac muscle
The principal muscle tissue of the vertebrate heart made up of striated fibers that appear to be separated from each other under the electron microscope but that function in long-term rhythmic contraction as if in protoplasmic continuity.
BTO:0000199
BTO:0000901
TAO:0001319
EMAPA:16208
EV:0100022
Muscle of heart
Muscle of heart[accessedResource: FMAID:9462][accessDate: 04-11-2010]
MA:0000080
The middle and thickest layer of the heart wall, composed of cardiac muscle.[accessedResource: BTO:0000901][accessDate: 04-11-2010]
Muscle layer of organ which has as its parts the myocardium proper and the conducting system of the heart.
James Malone
heart muscle[accessedResource: BTO:0000199][accessDate: 04-11-2010]
MAT:0000453
myocardium
http://www.arabidopsis.org/servlets/TairObject?id=1005158650&type=germplasm
CS57626 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158650&type=germplasm
CS57626
James Malone
MO_764
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_type_comparison_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_type_comparison_design[accessedResource: MO_764][accessDate: 04-11-2010]
cell type comparison design
Tomasz Adamusiak
Other forms of epilepsy, with intractable epilepsy
GeneRIF:15006707
Epilepsy (disorder)
SNOMEDCT:313307000
Epileptic convulsions, NOS
Epileptic fits, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
GeneRIF:12217514
A disorder characterized by recurrent seizures
GeneRIF:12000122
GeneRIF:15505174
GeneRIF:12270687
Epileptic seizures
Epilepsy, unspecified, without mention of intractable epilepsy
GeneRIF:12958597
SNOMEDCT:267593008
SNOMEDCT:193020001
ICD9:345.81
Epileptic fit
Epileptic convulsions
Epileptic attack
Other forms of epilepsy (disorder)
Epilectic attack, NOS
Epileptic[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
GeneRIF:12773553
GeneRIF:12746865
DOID:1826
GeneRIF:14597704
GeneRIF:15790563
[X]Other epilepsy (disorder)
Epilepsy, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
Epileptic seizures, NOS
Epilepsy NOS (disorder)
Epilectic attack, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
Other forms of epilepsy NOS (disorder)
Other forms of epilepsy[accessedResource: SNOMEDCT:193020001][accessDate: 04-11-2010]
GeneRIF:12875997
GeneRIF:15115830
GeneRIF:12648752
GeneRIF:15637270
EP - Epilepsy[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
Epileptic seizures, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
GeneRIF:15342642
GeneRIF:12185771
Other forms of epilepsy, without mention of intractable epilepsy[accessedResource: ICD9:345.80][accessDate: 04-11-2010]
Generalised convulsion[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
Epileptic Seizure[accessedResource: NIFSTD:birnlex_12718][accessDate: 04-11-2010]
Other forms of epilepsy NOS (disorder)[accessedResource: SNOMEDCT:193025006][accessDate: 04-11-2010]
GeneRIF:16129091
ICD9:345.8
SNOMEDCT:84757009
SNOMEDCT:193025006
Epileptic convulsions, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
Other forms of epilepsy, without mention of intractable epilepsy
EPILEP NEC W/O INTR EPIL[accessedResource: ICD9:345.80][accessDate: 04-11-2010]
Seizure disorder (disorder)[accessedResource: SNOMEDCT:128613002][accessDate: 04-11-2010]
Epilepsy, unspecified, with intractable epilepsy
GeneRIF:15461680
A disorder characterized by recurrent episodes of paroxysmal brain dysfunction due to a sudden, disorderly, and excessive neuronal discharge. Epilepsy classification systems are generally based upon: (1) clinical features of the seizure episodes (e.g., motor seizure), (2) etiology (e.g., post-traumatic), (3) anatomic site of seizure origin (e.g., frontal lobe seizure), (4) tendency to spread to other structures in the brain, and (5) temporal patterns (e.g., nocturnal epilepsy) (MeSH).
Other forms of epilepsy and recurrent seizures[accessedResource: ICD9:345.8][accessDate: 04-11-2010]
A disorder characterized by recurrent seizures[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
GeneRIF:12601092
ICD9:345
EF - Epileptic fit
GeneRIF:15215304
EP - Epilepsy
GeneRIF:15979590
Epileptic disorder, NOS
GeneRIF:15288497
GeneRIF:12702713
Generalised fit[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
[X]Other epilepsy[accessedResource: SNOMEDCT:194491006][accessDate: 04-11-2010]
Generalized seizure
Other forms of epilepsy (disorder)[accessedResource: SNOMEDCT:193020001][accessDate: 04-11-2010]
EPILEPSY NEC W INTR EPIL[accessedResource: ICD9:345.81][accessDate: 04-11-2010]
EPILEPSY NOS W INTR EPIL
ICD9:345.80
GeneRIF:12086636
Epilepsy, unspecified[accessedResource: ICD9:345.9][accessDate: 04-11-2010]
Epileptic seizure (finding)
GeneRIF:12205640
A disorder characterized by recurrent episodes of paroxysmal brain dysfunction due to a sudden, disorderly, and excessive neuronal discharge. Epilepsy classification systems are generally based upon: (1) clinical features of the seizure episodes (e.g., motor seizure), (2) etiology (e.g., post-traumatic), (3) anatomic site of seizure origin (e.g., frontal lobe seizure), (4) tendency to spread to other structures in the brain, and (5) temporal patterns (e.g., nocturnal epilepsy) (MeSH).[accessedResource: NIFSTD:birnlex_12718][accessDate: 04-11-2010]
NCIt:C3020
Epileptic disorder
Generalized fit
Other forms of epilepsy NOS[accessedResource: SNOMEDCT:193025006][accessDate: 04-11-2010]
Epileptic attack, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
GeneRIF:15120744
EPILEPSY NOS W INTR EPIL[accessedResource: ICD9:345.91][accessDate: 04-11-2010]
[X]Other epilepsy (disorder)[accessedResource: SNOMEDCT:194491006][accessDate: 04-11-2010]
Epilepsy, NOS
A brain disorder characterized by episodes of abnormally increased neuronal discharge resulting in transient episodes of sensory or motor neurological dysfunction, or psychic dysfunction. These episodes may or may not be associated with loss of consciousness or convulsions.[accessedResource: NCIt:C3020][accessDate: 04-11-2010]
GeneRIF:15937479
Generalized convulsion[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
Epilepsy, unspecified, without mention of intractable epilepsy[accessedResource: ICD9:345.90][accessDate: 04-11-2010]
Epileptic fits
Generalized fit[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
GeneRIF:12482897
GeneRIF:15254012
Epilepsy and recurrent seizures[accessedResource: ICD9:345][accessDate: 04-11-2010]
Epileptic fits[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
Epilepsy NOS (disorder)[accessedResource: SNOMEDCT:267593008][accessDate: 04-11-2010]
Epileptic disorder[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
GeneRIF:16049933
James Malone
GeneRIF:14660671
GeneRIF:15970629
EPILEPSY NEC W INTR EPIL
Epileptic attack[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
Generalized seizure (finding)
GeneRIF:14985377
Epilepsy (disorder)[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
NIFSTD:birnlex_12718
GeneRIF:15159136
GeneRIF:15009222
Generalized seizure (finding)[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
epilepsy
Generalized convulsion
GeneRIF:15665077
GeneRIF:16091474
Epilepsy, unspecified
GeneRIF:15567475
Seizure disorder (disorder)
GeneRIF:12686700
GeneRIF:12095917
GeneRIF:12435565
GeneRIF:12115687
Epileptic seizures[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
Epileptic fits, NOS
GeneRIF:15492925
ICD9:345.91
Seizure disorder
Generalized seizure[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
GeneRIF:15483119
Epileptic convulsions[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
Generalised seizure
Generalised convulsion
EPILEP NOS W/O INTR EPIL[accessedResource: ICD9:345.90][accessDate: 04-11-2010]
GeneRIF:14984901
GeneRIF:15304595
A brain disorder characterized by episodes of abnormally increased neuronal discharge resulting in transient episodes of sensory or motor neurological dysfunction, or psychic dysfunction. These episodes may or may not be associated with loss of consciousness or convulsions.
Other forms of epilepsy and recurrent seizures
Epilepsy and recurrent seizures
Epileptic disorder, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
GeneRIF:11889467
GeneRIF:15452324
GeneRIF:15452306
EPILEP NOS W/O INTR EPIL
GeneRIF:15160397
ICD9:345.9
Epileptic
Other forms of epilepsy, with intractable epilepsy[accessedResource: ICD9:345.81][accessDate: 04-11-2010]
Generalised seizure[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
Epileptic fit[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
GeneRIF:15505175
EPILEP NEC W/O INTR EPIL
SNOMEDCT:128613002
GeneRIF:15026125
GeneRIF:12960023
Epileptic seizure (finding)[accessedResource: SNOMEDCT:313307000][accessDate: 04-11-2010]
Epileptic attack, NOS
GeneRIF:12460603
GeneRIF:14646589
Other forms of epilepsy
ICD9:345.90
EF - Epileptic fit[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
GeneRIF:15282290
Seizure Disorder[accessedResource: NIFSTD:birnlex_12718][accessDate: 04-11-2010]
Tomasz Adamusiak
GeneRIF:14736855
GeneRIF:15772097
GeneRIF:16007083
Epileptic Seizure
GeneRIF:15258581
Epilepsy, unspecified, with intractable epilepsy[accessedResource: ICD9:345.91][accessDate: 04-11-2010]
Other forms of epilepsy NOS
SNOMEDCT:246545002
Generalised fit
GeneRIF:16095760
SNOMEDCT:194491006
GeneRIF:12533622
GeneRIF:15571623
[X]Other epilepsy
MAT:0000477
A nasal placode
A tissue modifier is an anatomical modifier which describes some quality about a tissue.
tissue modifier
James Malone
blind intestine[accessedResource: BTO:0000166][accessDate: 04-11-2010]
blindgut[accessedResource: BTO:0000166][accessDate: 04-11-2010]
EV:0100397
Intestinum crassum caecum
blind intestine
The first part of the large intestine, forming a dilated pouch into which open the ileum, colon, and appendix vermiformis.[accessedResource: BTO:0000166][accessDate: 04-11-2010]
cecum
SAEL:15
intestinum caecum[accessedResource: BTO:0000166][accessDate: 04-11-2010]
intestinum caecum
blindgut
Intestinum crassum caecum[accessedResource: FMAID:14541][accessDate: 04-11-2010]
cecum[accessedResource: MAT:0000288][accessDate: 04-11-2010]
caecum
James Malone
BTO:0000166
MAT:0000288
FMAID:14541
MA:00000334
EHDAA:3913
The first part of the large intestine, forming a dilated pouch into which open the ileum, colon, and appendix vermiformis.
CL:0000646
Undifferentiated; mitotic stem cell for other epithelial cell types; rounded or elliptical with little cytoplasm and few organelles; contain cytokeratin intermediate filament.
Undifferentiated; mitotic stem cell for other epithelial cell types; rounded or elliptical with little cytoplasm and few organelles; contain cytokeratin intermediate filament.[accessedResource: CL:0000646][accessDate: 04-11-2010]
basal cell
James Malone
hormones
endocrine
http://www.ebi.ac.uk/efo/EFO_0002657
An endogenous compound that is formed in specialized organ or group of cells and carried to another organ or group of cells, in the same organism, upon which it has a specific regulatory function.
hormone
cbdca
A platinum coordination entity that has formula C6H12N2O4Pt.
InChIKey=OLESAACUTLOWQZ-DRGNIJNRCF
C6H12N2O4Pt
C6H6O4Pt.2H3N
cis-diammine(1,1-cyclobutanedicarboxylato)platinum(II)
carboplatin
(SP-4-2)-diammine[cyclobutane-1,1-dicarboxylato(2-)-kappa(2)O,O']platinum
InChI=1/C6H8O4.2H3N.Pt/c7-4(8)6(5(9)10)2-1-3-6;;;/h1-3H2,(H,7,8)(H,9,10);2*1H3;/q;;;+2/p-2/fC6H6O4.2H3N.Pt/q-2;;;m
Paraplatin
[H][N]([H])([H])[Pt]1(OC(=O)C2(CCC2)C(=O)O1)[N]([H])([H])[H]
cis-(1,1-cyclobutanedicarboxylato)diammineplatinum(II)
cis-diammine(1,1-cyclobutanedicarboxylato)platinum
James Malone
Ele Holloway
769P
Oligodendroglioma, no ICD-O subtype[accessedResource: SNOMEDCT:73348003][accessDate: 04-11-2010]
Anaplastic Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 04-11-2010]
oligodendroglioma
Oligodendrogliomas, Childhood[accessedResource: MSH:D009837][accessDate: 04-11-2010]
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms (MeSH).[accessedResource: NIFSTD:birnlex_12627][accessDate: 04-11-2010]
Tomasz Adamusiak
WELL DIFFER OLIGODENDROGLIOMA[accessedResource: MSH:D009837][accessDate: 04-11-2010]
GeneRIF:12908752
Mixed Oligodendroglioma-Astrocytomas
Well-Differentiated Oligodendroglioma
Oligodendrogliomas, Childhood
A well-differentiated (WHO grade II), diffusely infiltrating neuroglial tumor of adults, typically located in the cerebral hemispheres. It is composed predominantly of cells which morphologically resemble oligodendroglia. The neoplastic cells have rounded homogeneous nuclei and, on paraffin sections, a swollen, clear cytoplasm ('honeycomb' appearance). It generally recurs locally, with median post-operative survival times ranging from 3 to 5 years for patients with all histological grades. (Adapted from WHO.)
DOID:3181
Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Mixed Oligodendroglioma-Ependymomas
Oligodendroglioma-Ependymoma, Mixed[accessedResource: MSH:D009837][accessDate: 04-11-2010]
GeneRIF:12635659
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms (MeSH).
Oligodendroblastomas
Oligodendroblastoma[accessedResource: NIFSTD:birnlex_12627][accessDate: 04-11-2010]
Oligodendroglioma-Astrocytoma, Mixed
Oligodendroglioma (morphologic abnormality)
GeneRIF:15834925
Oligodendroglioma, Childhood
A well-differentiated (WHO grade II), diffusely infiltrating neuroglial tumor, typically located in the cerebral hemispheres. It is composed predominantly of cells which morphologically resemble oligodendroglia. The neoplastic cells have rounded homogeneous nuclei and, on paraffin sections, a swollen, clear cytoplasm ('honeycomb' appearance). (Adapted from WHO.)[accessedResource: NCIt:C3288][accessDate: 04-11-2010]
Well Differentiated Oligodendroglial Tumor[accessedResource: NCIt:C3288][accessDate: 04-11-2010]
[M]Oligodendroglioma NOS[accessedResource: SNOMEDCT:189920006][accessDate: 04-11-2010]
Mixed Oligodendroglioma-Ependymomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
GeneRIF:15993274
MSH:D009837
Adult Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 04-11-2010]
WHO Grade II Oligodendroglial Neoplasm[accessedResource: NCIt:C3288][accessDate: 04-11-2010]
Anaplastic Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroglioma, NOS
Adult Oligodendroglioma
SNOMEDCT:73348003
[M]Oligodendroglioma NOS (morphologic abnormality)
Oligodendroglioma-Astrocytomas, Mixed[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Anaplastic Oligodendroglioma
A well-differentiated (WHO grade II), diffusely infiltrating neuroglial tumor, typically located in the cerebral hemispheres. It is composed predominantly of cells which morphologically resemble oligodendroglia. The neoplastic cells have rounded homogeneous nuclei and, on paraffin sections, a swollen, clear cytoplasm ('honeycomb' appearance). (Adapted from WHO.)
Mixed Oligodendroglioma Ependymoma
Oligodendrogliomas, Adult
GeneRIF:15950764
NIFSTD:birnlex_12627
Oligodendroglioma, no ICD-O subtype (morphologic abnormality)
Oligodendroglioma NOS (morphologic abnormality)
Well-Differentiated Oligodendrogliomas
GeneRIF:12850541
Mixed Oligodendroglioma Astrocytoma[accessedResource: MSH:D009837][accessDate: 04-11-2010]
WHO Grade II Oligodendroglial Neoplasm
Oligodendroglioma, no ICD-O subtype
Well-Differentiated Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
WHO Grade II Oligodendroglial Tumor[accessedResource: NCIt:C3288][accessDate: 04-11-2010]
Oligodendroblastomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
James Malone
Oligodendroglioma, NOS[accessedResource: SNOMEDCT:73348003][accessDate: 04-11-2010]
GeneRIF:16103065
WELL DIFFER OLIGODENDROGLIOMA
Oligodendroglioma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:73348003][accessDate: 04-11-2010]
A well-differentiated (WHO grade II), diffusely infiltrating neuroglial tumor, typically located in the cerebral hemispheres. It is composed predominantly of cells which morphologically resemble oligodendroglia. The neoplastic cells have rounded homogeneous nuclei and, on paraffin sections, a swollen, clear cytoplasm (&apos;honeycomb&apos; appearance). (Adapted from WHO.)
GeneRIF:15484698
NCIt:C3288
Oligodendroblastoma
Oligodendroglioma NOS (morphologic abnormality)[accessedResource: DOID:3181][accessDate: 04-11-2010]
Oligodendrogliomas, Adult[accessedResource: MSH:D009837][accessDate: 04-11-2010]
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Well Differentiated Oligodendroglial Tumor
Oligodendroglioma (morphologic abnormality)[accessedResource: SNOMEDCT:73348003][accessDate: 04-11-2010]
SNOMEDCT:189920006
Oligodendroglioma, Childhood[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroglioma, Well-Differentiated[accessedResource: MSH:D009837][accessDate: 04-11-2010]
WHO Grade II Oligodendroglial Tumor
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)
[M]Oligodendroglioma NOS
Oligodendrogliomas, Anaplastic
Oligodendrogliomas
[M]Oligodendroglioma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189920006][accessDate: 04-11-2010]
PERSON: James Malone
twin study
A study type is an experimental factor describing the method of investigating particular types of research questions or solving particular types of problems.
study design
James Malone
SNU398
James Malone
Ele Holloway
James Malone
SchneiderSL2
S49
MO_858
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#dye_swap_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#dye_swap_design[accessedResource: MO_858][accessDate: 04-11-2010]
dye swap design
Tomasz Adamusiak
agentes antimuscarinicos
agente antimuscarinico
Antimuskarinika
James Malone
CHEBI:48876
muscarinic antagonists
Antimuskarinikum
muscarinic acetylcholine receptor antagonist
http://www.ebi.ac.uk/efo/EFO_0001881
antimuscarinicos
muscarinic antagonist
agents antimuscariniques
antimuscarinic agents
A drug that binds to but does not activate muscarinic cholinergic receptors, thereby blocking the actions of endogenous acetylcholine or exogenous agonists.
http://www.arabidopsis.org/servlets/TairObject?id=1005158858&type=germplasm
CS57834 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158858&type=germplasm
CS57834
James Malone
CL:0000101
Any neuron having a sensory function; an afferent neuron conveying sensory impulses.
Any neuron having a sensory function; an afferent neuron conveying sensory impulses.[accessedResource: CL:0000101][accessDate: 04-11-2010]
sensory neuron
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158882&type=germplasm
CS57858 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158882&type=germplasm
CS57858
James Malone
http://jaxmice.jax.org/strain/001137.html
NIFSTD:birnlex_152
129P1/ReJ
Tomasz Adamusiak
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158728&type=germplasm
CS57704 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158728&type=germplasm
CS57704
James Malone
MCF 10A
James Malone
Waldenstrm macroglobulinemia (disorder)
Macroglobulinemia NOS (disorder)[accessedResource: DOID:9080][accessDate: 04-11-2010]
Waldenstrom's macroglob'naemia
macroglobulinemia
Waldenstrom's macroglobulinemia (disorder)[accessedResource: DOID:9080][accessDate: 04-11-2010]
Waldenstrom's macroglobulinaemia
Lymphoplasmacytic Lymphoma/Waldenstrom Macroglobulinemia
Waldenstrom's macroglobulinemia (morphologic abnormality)
Macroglobulinemia (disorder)
Waldenstrm macroglobulinemia (disorder)[accessedResource: DOID:9080][accessDate: 04-11-2010]
primary macroglobulinemia[accessedResource: DOID:9080][accessDate: 04-11-2010]
Waldenstrom's macroglobulinemia (morphologic abnormality)[accessedResource: DOID:9080][accessDate: 04-11-2010]
Tomasz Adamusiak
Waldenstrom's macroglobulinaemia[accessedResource: DOID:9080][accessDate: 04-11-2010]
Macroglobulinemia (disorder)[accessedResource: DOID:9080][accessDate: 04-11-2010]
Waldenstrom's macroglobulinemia
Ele Holloway
Macroglobulinemia NOS (disorder)
Lymphoplasmacytic Lymphoma/Waldenstrom Macroglobulinemia[accessedResource: DOID:9080][accessDate: 04-11-2010]
DOID:9080
primary macroglobulinemia
Waldenstrom's macroglob'naemia[accessedResource: DOID:9080][accessDate: 04-11-2010]
Waldenstrom's macroglobulinemia (disorder)
This is no longer needed - use process or study design (if the design is for study).
true
ChIP-Chip array
An experiment type is an experimental factor describing the area of technology that was used to perform an experiment.
obsolete_experiment type
MO_885
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#replicate_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#replicate_design[accessedResource: MO_885][accessDate: 04-11-2010]
replicate design
Tomasz Adamusiak
MO_565
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#all_pairs
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#all_pairs[accessedResource: MO_565][accessDate: 04-11-2010]
all pairs
Tomasz Adamusiak
James Malone
HS578T
A lung structuret is a respiratory system component which is part of a lung.
lung structure
James Malone
breast tumor luminal
James Malone
A tissue-resident macrophage of the renal glomerular mesangium involved in the disposal and degradation of filtration residues, presentation of antigen to T cells and in tissue remodeling.
CL:0000777
James Malone
mesangial phagocyte
mesangial cell
A tissue-resident macrophage of the renal glomerular mesangium.
A tissue-resident macrophage of the renal glomerular mesangium involved in the disposal and degradation of filtration residues, presentation of antigen to T cells and in tissue remodeling.[accessedResource: CL:0000777][accessDate: 04-11-2010]
mesangial cell[accessedResource: CL:0000777][accessDate: 04-11-2010]
H4
James Malone
Ele Holloway
Jie Zheng
An immature erythrocyte showing a basophilic reticulum under vital staining.
reticulocyte
An immature erythrocyte that changes the protein composition of its plasma membrane by exosome formation and extrusion. The types of protein removed differ between species though removal of the transferrin receptor is apparent in mammals and birds.
An immature erythrocyte that changes the protein composition of its plasma membrane by exosome formation and extrusion. The types of protein removed differ between species though removal of the transferrin receptor is apparent in mammals and birds.[accessedResource: CL:0000558][accessDate: 04-11-2010]
Tomasz Adamusiak
CL:0000558
Abdominal part of aorta
Pars abdominalis aortae[accessedResource: FMAID:3789][accessDate: 04-11-2010]
Jie Zheng
Descending abdominal aorta[accessedResource: FMAID:3789][accessDate: 04-11-2010]
abdominal aorta
Descending abdominal aorta
FMAID:3789
Pars abdominalis aortae
Abdominal part of aorta[accessedResource: FMAID:3789][accessDate: 04-11-2010]
Tomasz Adamusiak
NCIt:C12666
glandula suprarenalis
epinephros[accessedResource: BTO:0000047][accessDate: 04-11-2010]
chromafin cell
Adrenals
Adrenal Glands[accessedResource: NCIt:C12666][accessDate: 04-11-2010]
epinephros
Either of a pair of complex endocrine organs near the anterior medial border of the kidney consisting of a mesodermal cortex that produces glucocorticoid, mineralocorticoid, and androgenic hormones and an ectodermal medulla that produces epinephrine and norepinephrine.[accessedResource: BTO:0000047][accessDate: 04-11-2010]
Tomasz Adamusiak
A cell found within the adrenal medulla that secrete biogenic amine hormones upon stimulation.[accessedResource: CL:0000336][accessDate: 04-11-2010]
MAT:0000071
Adrenals[accessedResource: NCIt:C12666][accessDate: 04-11-2010]
adrenal
adrenal medulla chromaffin cell
suprarenal capsule
A flattened, roughly triangular body resting upon the upper end of each kidney; it is one of the ductless glands furnishing internal secretions (epinephrine and norepinephrine from the medulla and steroid hormones from the cortex).
XAO:0000164
atrabiliary capsule
adrenal capsule[accessedResource: BTO:0000047][accessDate: 04-11-2010]
BTO:0000047
glandula suprarenalis[accessedResource: BTO:0000047][accessDate: 04-11-2010]
A cell found within the adrenal medulla that secrete biogenic amine hormones upon stimulation.
adrenal[accessedResource: BTO:0000047][accessDate: 04-11-2010]
Suprarenal gland[accessedResource: FMAID:9604][accessDate: 04-11-2010]
EV:0100135
SAEL:3
CL:0000336
chromafin cell[accessedResource: TAO:0009167][accessDate: 04-11-2010]
adrenal capsule
EMAPA:18426
suprarenal capsule[accessedResource: BTO:0000047][accessDate: 04-11-2010]
Suprarenal gland
Either of a pair of complex endocrine organs near the anterior medial border of the kidney consisting of a mesodermal cortex that produces glucocorticoid, mineralocorticoid, and androgenic hormones and an ectodermal medulla that produces epinephrine and norepinephrine.
adrenal medulla chromaffin cell[accessedResource: CL:0000336][accessDate: 04-11-2010]
TAO:0009167
atrabiliary capsule[accessedResource: BTO:0000047][accessDate: 04-11-2010]
adrenal medulla cell
A flattened, roughly triangular body resting upon the upper end of each kidney; it is one of the ductless glands furnishing internal secretions (epinephrine and norepinephrine from the medulla and steroid hormones from the cortex).[accessedResource: NCIt:C12666][accessDate: 04-11-2010]
Adrenal Glands
adrenal medulla cell[accessedResource: TAO:0009167][accessDate: 04-11-2010]
FMAID:9604
adrenal gland
MA:0000116
James Malone
NCI-H1581
James Malone
Ele Holloway
Raji
James Malone
Ele Holloway
XAO:0000163
Thymus
Thymus[accessedResource: FMAID:9607][accessDate: 10-05-2010]
ZFA:0001078
TAO:0001078
MA:0000142
true
FMAID:9607
Thymus gland[accessedResource: FMAID:9607][accessDate: 10-05-2010]
EHDAA:9119
MFO:0003240
EV:0100138
Thymus gland
SAEL:107
obsolete_thymus
EMAPA:18768
MAT:0000080
pioglitazone
James Malone
CCc1ccc(CCOc2ccc(CC3SC(=O)NC3=O)cc2)nc1
(+-)-5-((4-(2-(5-ethyl-2-pyridinyl)ethoxy)phenyl)methyl)-2,4-thiazolidinedione
pioglitazonum
A thiazolidenedione that has formula C19H20N2O3S.
InChIKey=HYAFETHFCAUJAY-PKSOQXRJCR
http://www.ebi.ac.uk/efo/EFO_0001592
C19H20N2O3S
InChI=1/C19H20N2O3S/c1-2-13-3-6-15(20-12-13)9-10-24-16-7-4-14(5-8-16)11-17-18(22)21-19(23)25-17/h3-8,12,17H,2,9-11H2,1H3,(H,21,22,23)/f/h21H
5-{4-[2-(5-ethylpyridin-2-yl)ethoxy]benzyl}-1,3-thiazolidine-2,4-dione
CHEBI:8228
pioglitazona
NCI-H295R
James Malone
Ele Holloway
DOID:4573
Xanthomatous deposition (morphologic abnormality)
Xanthelasma
Xanthomatous deposition (morphologic abnormality)[accessedResource: DOID:4573][accessDate: 04-11-2010]
Xanthelasma[accessedResource: DOID:4573][accessDate: 04-11-2010]
xanthoma
Tomasz Adamusiak
Psychiatric illness or diseases manifested by breakdowns in the adaptational process expressed primarily as abnormalities of thought, feeling, and behavior producing either distress or impairment of function (MeSH).[accessedResource: NIFSTD:birnlex_12669][accessDate: 04-11-2010]
Psychiatric Disorder
Behavior Disorder
Mental Disorder
Mental Disorder[accessedResource: NIFSTD:birnlex_12669][accessDate: 04-11-2010]
Psychiatric illness or diseases manifested by breakdowns in the adaptational process expressed primarily as abnormalities of thought, feeling, and behavior producing either distress or impairment of function (MeSH).
Psychiatric Disorder[accessedResource: NIFSTD:birnlex_12669][accessDate: 04-11-2010]
Behavior Disorder[accessedResource: NIFSTD:birnlex_12669][accessDate: 04-11-2010]
Tomasz Adamusiak
mental or behavioural disorder
NIFSTD:birnlex_12669
James Malone
Uninfected class is a disposition in which the bearer is not known to be affected by a disease withtin the context of a study
uninfected
James Malone
An immature B cell is a precursor B cell that has the phenotype surface IgM-positive and surface IgD-negative, and have not undergone class immunoglobulin class switching or peripheral encounter with antigen and activation.
immature B-lymphocyte
James Malone
immature B cell
newly formed B Cell[accessedResource: CL:0000816][accessDate: 04-11-2010]
newly formed B Cell
CL:0000816
An immature B cell is a precursor B cell that has the phenotype surface IgM-positive and surface IgD-negative, and have not undergone class immunoglobulin class switching or peripheral encounter with antigen and activation.[accessedResource: CL:0000816][accessDate: 04-11-2010]
immature B-lymphocyte[accessedResource: CL:0000816][accessDate: 04-11-2010]
DOID:9952
ALL
Acute lymphoblastic leukemia, L2 type
Precursor cell lymphoblastic leukaemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
GeneRIF:12065898
Acute lymphoblastic leukemia-lymphoma
Leukemia with an acute onset, characterized by the presence of lymphoblasts in the bone marrow and the peripheral blood. It includes the precursor B lymphoblastic leukemia and precursor T lymphoblastic leukemia.
ALL - Acute Lymphocytic Leukemia[accessedResource: NCIt:C3167][accessDate: 04-11-2010]
Acute lymphoid leukaemia, disease[accessedResource: SNOMEDCT:91857003][accessDate: 04-11-2010]
GeneRIF:12408765
ALL - Acute lymphoblastic leukaemia[accessedResource: SNOMEDCT:91857003][accessDate: 04-11-2010]
GeneRIF:15604885
GeneRIF:16138344
Acute lymphoid leukemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Leukemia with an acute onset, characterized by the presence of lymphoblasts in the bone marrow and the peripheral blood. It includes the acute B lymphoblastic leukemia and acute T lymphoblastic leukemia.[accessedResource: NCIt:C3167][accessDate: 04-11-2010]
GeneRIF:14959847
Lymphoblastic leukemia, L2 type
Leukemia with an acute onset, characterized by the presence of lymphoblasts in the bone marrow and the peripheral blood. It includes the acute B lymphoblastic leukemia and acute T lymphoblastic leukemia.
[M]Acute lymphoid leukemia
Acute lymphocytic leukemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute Lymphocytic Leukaemia
[M]Acute lymphoid leukemia (morphologic abnormality)
[M]Acute lymphoid leukemia (morphologic abnormality)[accessedResource: SNOMEDCT:190034000][accessDate: 04-11-2010]
Acute lymphatic leukemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Lymphoblastic leukemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute Lymphogenous Leukemia
Precursor cell lymphoblastic leukemia (morphologic abnormality)[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
SNOMEDCT:190034000
GeneRIF:14562113
FAB L2[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Lymphoblastic leukaemia, L2 type
Acute Lymphogenous Leukemia[accessedResource: NCIt:C3167][accessDate: 04-11-2010]
Acute lymphoid leukaemia, L2 type
Acute lymphocytic leukemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute lymphoid leukaemia, disease
Precursor cell lymphoblastic leukaemia, not phenotyped[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute lymphocytic leukaemia, L2 type
GeneRIF:15390181
Lymphoblastic leukaemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
James Malone
GeneRIF:12008081
GeneRIF:12091359
Acute lymphatic leukemia, L2 type
ALL - Acute Lymphocytic Leukemia
Acute lymphatic leukaemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute lymphoid leukemia, disease[accessedResource: SNOMEDCT:91857003][accessDate: 04-11-2010]
Precursor cell lymphoblastic leukemia, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute lymphatic leukaemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
GeneRIF:14751048
ACT LYM LEUK W/O RMSION
acute lymphocytic leukemia
GeneRIF:12203795
Acute lymphoblastic leukaemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Precursor Cell Lymphoblastic Leukemia
GeneRIF:12163057
Acute lymphocytic leukaemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute lymphoid leukemia, disease (disorder)
FAB L2
Acute lymphoid leukaemia[accessedResource: SNOMEDCT:91857003][accessDate: 04-11-2010]
Acute lymphoblastic leukemia, precursor-cell type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Precursor cell lymphoblastic leukemia, no ICD-O subtype (morphologic abnormality)
Precursor Lymphoblastic Leukemia
GeneRIF:16012335
GeneRIF:14613996
Acute lymphoid leukemia, L2 type
Acute lymphocytic leukemia, L2 type
Acute lymphoid leukemia without mention of remission[accessedResource: SNOMEDCT:91857003][accessDate: 04-11-2010]
Precursor cell lymphoblastic leukaemia
GeneRIF:11964305
ALL - Acute lymphoblastic leukemia[accessedResource: SNOMEDCT:91857003][accessDate: 04-11-2010]
Precursor cell lymphoblastic leukemia, not phenotyped
Acute lymphatic leukaemia, L2 type
Lymphoblastic leukaemia
Acute lymphoblastic leukaemia, precursor-cell type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
GeneRIF:15878620
Acute lymphatic leukemia
Acute lymphoblastic leukaemia, precursor-cell type
Acute lymphoblastic leukaemia-lymphoma
GeneRIF:15001471
GeneRIF:14762685
GeneRIF:12958073
GeneRIF:12133444
Precursor cell lymphoblastic leukemia, not phenotyped[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute lymphoblastic leukaemia-lymphoma[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute lymphoblastic leukaemia, L2 type
GeneRIF:15613101
ICD9:204.00
[M]Acute lymphoid leukemia[accessedResource: SNOMEDCT:190034000][accessDate: 04-11-2010]
SNOMEDCT:128822004
Precursor cell lymphoblastic leukemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Precursor cell lymphoblastic leukemia (morphologic abnormality)
GeneRIF:15717687
Acute lymphoblastic leukemia, precursor-cell type
ALL - Acute lymphoblastic leukemia
GeneRIF:12879482
Acute Lymphoid Leukemia[accessedResource: NCIt:C3167][accessDate: 04-11-2010]
GeneRIF:15297414
Acute lymphoid leukemia without mention of remission
Lymphoblastic leukemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Lymphoblastic leukaemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
SNOMEDCT:91857003
GeneRIF:12412576
ACT LYM LEUK W/O RMSION[accessedResource: ICD9:204.00][accessDate: 04-11-2010]
GeneRIF:12532332
Acute lymphoid leukaemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Lymphoblastic Leukemia
Acute lymphoid leukemia, disease
Acute lymphoblastic leukaemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
GeneRIF:11855781
Acute lymphoid leukaemia
ALL[accessedResource: NCIt:C3167][accessDate: 04-11-2010]
Acute lymphoblastic leukemia-lymphoma[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute lymphocytic leukaemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute lymphoblastic leukemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
GeneRIF:14580777
NCIt:C3167
[M]Acute lymphoid leukaemia
GeneRIF:12142782
Precursor cell lymphoblastic leukaemia, not phenotyped
GeneRIF:15353558
Acute lymphatic leukemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
GeneRIF:12854903
Acute lymphoid leukemia
ALL - Acute lymphoblastic leukaemia
Precursor Lymphoblastic Leukemia[accessedResource: NCIt:C3167][accessDate: 04-11-2010]
GeneRIF:15618957
ICD9:204.0
[M]Acute lymphoid leukaemia[accessedResource: SNOMEDCT:190034000][accessDate: 04-11-2010]
Acute Lymphocytic Leukemias[accessedResource: NCIt:C3167][accessDate: 04-11-2010]
Acute Lymphocytic Leukemias
GeneRIF:14706337
acute lymphoblastic leukemia
Acute lymphoid leukemia, disease (disorder)[accessedResource: SNOMEDCT:91857003][accessDate: 04-11-2010]
Acute lymphatic leukaemia
Acute lymphoblastic leukaemia
MO_626
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#wash_station
A microarray wash station is an instrument used to wash or stain microarrays.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#wash_station[accessedResource: MO_626][accessDate: 04-11-2010]
microarray wash station
James Malone
The substantia nigra is located in the mesencephalon (mid brain) region of the brain. It is part of the basal ganglia.[accessedResource: BTO:0000143][accessDate: 04-11-2010]
MAT:0000504
Nucleus of basis pedunculi[accessedResource: FMAID:67947][accessDate: 04-11-2010]
BTO:0000143
Subdivision of the midbrain anterior to the midbrain tegmentum which contains darkly pigmented neurons.
FMAID:67947
James Malone
Soemmering's substance
substantia nigra
EV:0100247
MA:0000210
Nucleus of basis pedunculi
Soemmering's substance[accessedResource: FMAID:67947][accessDate: 04-11-2010]
The substantia nigra is located in the mesencephalon (mid brain) region of the brain. It is part of the basal ganglia.
Ele Holloway
CA46
James Malone
CNS - Brain - Cerebellum (MMHCC)[accessedResource: NCIt:C22609][accessDate: 10-05-2010]
Cerebellum[accessedResource: NCIt:C22609][accessDate: 10-05-2010]
James Malone
CNS - Brain - Cerebellum (MMHCC)
true
obsolete_CNS brain cerebellum MMHCC
Obsolete: No longer required in EFO
NCIt:C22609
Cerebellum
kidney derived cell line
GM12762
James Malone
GeneRIF:14565662
GeneRIF:12521993
GeneRIF:12763926
GeneRIF:12855573
B-cell chronic lymphocytic leukemia/small lymphocytic lymphoma (morphologic abnormality)[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:15514014
GeneRIF:15339846
GeneRIF:15160913
GeneRIF:14687619
GeneRIF:11986957
GeneRIF:14654078
GeneRIF:12592341
Chronic lymphocytic leukemia, morphology (morphologic abnormality)
Chronic lymphoid leukemia[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
ICD9:204.1
GeneRIF:11042507
SNOMEDCT:51092000
CLL - Chronic lymphocytic leukaemia[accessedResource: SNOMEDCT:92814006][accessDate: 04-11-2010]
GeneRIF:14592423
B-cell chronic lymphocytic leukemia/small lymphocytic lymphoma (morphologic abnormality)
GeneRIF:12855567
Chronic lymphocytic leukaemia
GeneRIF:12860021
GeneRIF:12854897
Chronic lymphoid leukemia without mention of remission[accessedResource: SNOMEDCT:92814006][accessDate: 04-11-2010]
Chronic lymphocytic leukemia, B-cell type
GeneRIF:16227675
CLL - Chronic lymphocytic leukemia
Chronic lymphoid leukemia
Chronic lymphoid leukaemia
Chronic lymphocytic leukemia, B-cell type[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:16014560
GeneRIF:14692527
GeneRIF:12700638
GeneRIF:12176902
GeneRIF:12127555
GeneRIF:15672409
GeneRIF:14504101
Chronic lymphocytic leukaemia[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:14687618
GeneRIF:15621797
Chronic lymphoid leukemia, disease (disorder)
GeneRIF:12351410
GeneRIF:12002755
GeneRIF:12187026
GeneRIF:15809452
GeneRIF:12393534
GeneRIF:15385937
GeneRIF:15466924
GeneRIF:15325703
GeneRIF:12359369
GeneRIF:12393602
GeneRIF:12011454
GeneRIF:12144536
GeneRIF:12454749
Chronic lymphocytic leukaemia, B-cell type[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
chronic lymphocytic leukemia
Chronic lymphoid leukaemia, disease[accessedResource: SNOMEDCT:92814006][accessDate: 04-11-2010]
ICD9:204.10
GeneRIF:12447961
GeneRIF:12555221
DOID:1040
Chronic lymphocytic leukaemia, B-cell type
GeneRIF:12835724
GeneRIF:16103882
GeneRIF:15470489
GeneRIF:11836173
GeneRIF:14574328
GeneRIF:11981828
GeneRIF:15158092
GeneRIF:12480711
GeneRIF:15613544
Chronic lymphatic leukemia[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:12604404
GeneRIF:12379312
GeneRIF:15471955
GeneRIF:15861184
GeneRIF:15175625
SNOMEDCT:92814006
GeneRIF:15370248
GeneRIF:15059847
GeneRIF:12127553
GeneRIF:12010828
GeneRIF:15541476
Chronic lymphatic leukaemia[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:15674425
Chronic lymphatic leukemia
GeneRIF:12857600
GeneRIF:12091354
GeneRIF:12411322
B-cell chronic lymphocytic leukemia
GeneRIF:12010662
B-cell chronic lymphocytic leukemia/small lymphocytic lymphoma[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:15291354
Chronic lymphoid leukemia, disease (disorder)[accessedResource: SNOMEDCT:92814006][accessDate: 04-11-2010]
Chronic lymphoid leukaemia, disease
GeneRIF:15488762
GeneRIF:15370246
B-cell chronic lymphocytic leukaemia/small lymphocytic lymphoma
GeneRIF:15927846
B-cell chronic lymphocytic leukemia/small lymphocytic lymphoma
GeneRIF:11891278
Chronic lymphoid leukemia, disease[accessedResource: SNOMEDCT:92814006][accessDate: 04-11-2010]
GeneRIF:11986939
GeneRIF:15182336
GeneRIF:15183896
GeneRIF:11929789
CLL
Chronic lymphoid leukaemia[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:14637279
Chronic lymphoid leukemia, disease
GeneRIF:11839681
GeneRIF:12931211
CLL - Chronic lymphocytic leukaemia
CHR LYM LEUK W/O RMSION[accessedResource: ICD9:204.10][accessDate: 04-11-2010]
CHR LYM LEUK W/O RMSION
Chronic lymphatic leukaemia
GeneRIF:15759031
GeneRIF:15591116
GeneRIF:15731179
GeneRIF:12481899
Chronic lymphocytic leukemia, morphology (morphologic abnormality)[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
B-cell chronic lymphocytic leukaemia/small lymphocytic lymphoma[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:15972449
CLL - Chronic lymphocytic leukemia[accessedResource: SNOMEDCT:92814006][accessDate: 04-11-2010]
GeneRIF:15802535
Chronic lymphoid leukemia without mention of remission
GeneRIF:14996703
GeneRIF:12595313
GeneRIF:11943260
GeneRIF:15052938
James Malone
GeneRIF:16295759
GeneRIF:12644014
GeneRIF:14689061
GeneRIF:12100030
GeneRIF:15728130
GeneRIF:12958068
GeneRIF:15284121
mating type alpha
MO_637
A S. cerevisiae mating type cells that secrete a pheromone that stimulates a haploids.[accessedResource: PATO:0001344][accessDate: 04-11-2010]
alpha mating type (yeast)
James Malone
alpha mating type (yeast)[accessedResource: PATO:0001344][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mating_type_alpha
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mating_type_alpha[accessedResource: MO_637][accessDate: 04-11-2010]
A S. cerevisiae mating type cells that secrete a pheromone that stimulates a haploids.
alpha
alpha[accessedResource: PATO:0001344][accessDate: 04-11-2010]
PATO:0001344
Homo sapiens cell line
NCIt:C49190
aorta endothelium
Tomasz Adamusiak
Jie Zheng
MSTO-211H cell[accessedResource: BTO:0002425][accessDate: 04-11-2010]
Ele Holloway
James Malone
Human mesothelioma cell line; established from the pleural effusion of a 62-year-old Caucasian man with mesothelioma (malignant biphasic) who did not have any prior therapy.
Human mesothelioma cell line; established from the pleural effusion of a 62-year-old Caucasian man with mesothelioma (malignant biphasic) who did not have any prior therapy.[accessedResource: BTO:0002425][accessDate: 04-11-2010]
MSTO-211H
CRL-2081
MSTO-211H cell
BTO:0002425
http://www.arabidopsis.org/servlets/TairObject?id=1005158684&type=germplasm
CS57660 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158684&type=germplasm
CS57660
James Malone
musculo-skeletal system cell
A usually malignant and aggressive neoplasm of the mesothelium which is often associated with exposure to asbestos.
Malignant mesothelioma
Mesotheliomas
Mesothelioma, malignant (morphologic abnormality)
Mesothelioma, malignant[accessedResource: SNOMEDCT:62064005][accessDate: 04-11-2010]
Mesothelioma, NOS
A tumor derived from mesothelial tissue (peritoneum, pleura, pericardium). It appears as broad sheets of cells, with some regions containing spindle-shaped, sarcoma-like cells and other regions showing adenomatous patterns. Pleural mesotheliomas have been linked to exposure to asbestos. (Dorland, 27th ed)[accessedResource: MSH:D008654][accessDate: 04-11-2010]
SNOMEDCT:62064005
Mesothelioma, NOS[accessedResource: DOID:2645][accessDate: 04-11-2010]
SNOMEDCT:189837000
Mesothelioma, unspecified (morphologic abnormality)[accessedResource: DOID:2645][accessDate: 04-11-2010]
Mesothelioma, unspecified (disorder)[accessedResource: DOID:2645][accessDate: 04-11-2010]
SNOMEDCT:190110008
Mesothelioma, unspecified (morphologic abnormality)
Mesotheliomas[accessedResource: MSH:D008654][accessDate: 04-11-2010]
A tumor derived from mesothelial tissue (peritoneum, pleura, pericardium). It appears as broad sheets of cells, with some regions containing spindle-shaped, sarcoma-like cells and other regions showing adenomatous patterns. Pleural mesotheliomas have been linked to exposure to asbestos. (Dorland, 27th ed)
[M]Mesothelioma, unspecified
[X]Mesothelioma, unspecified (disorder)[accessedResource: SNOMEDCT:190110008][accessDate: 04-11-2010]
GeneRIF:15705870
Mesothelioma, unspecified (disorder)
GeneRIF:15900580
GeneRIF:15777968
[M]Mesothelioma, unspecified (morphologic abnormality)
[M]Mesothelioma, unspecified (morphologic abnormality)[accessedResource: SNOMEDCT:189837000][accessDate: 04-11-2010]
Mesothelioma, malignant (morphologic abnormality)[accessedResource: SNOMEDCT:62064005][accessDate: 04-11-2010]
GeneRIF:15996160
GeneRIF:12082623
DOID:2645
A usually malignant and aggressive neoplasm of the mesothelium which is often associated with exposure to asbestos.[accessedResource: NCIt:C3234][accessDate: 04-11-2010]
mesothelioma
[X]Mesothelioma, unspecified[accessedResource: SNOMEDCT:190110008][accessDate: 04-11-2010]
GeneRIF:15334061
MSH:D008654
James Malone
GeneRIF:12082024
GeneRIF:14729617
GeneRIF:14960305
[M]Mesothelioma, unspecified[accessedResource: SNOMEDCT:189837000][accessDate: 04-11-2010]
[X]Mesothelioma, unspecified
GeneRIF:14576363
NCIt:C3234
[X]Mesothelioma, unspecified (disorder)
GeneRIF:12839939
ICA - Internal carotid artery stenosis[accessedResource: SNOMEDCT:233964008][accessDate: 04-11-2010]
Internal carotid artery stenosis (disorder)[accessedResource: SNOMEDCT:233964008][accessDate: 04-11-2010]
Internal carotid artery stenosis (disorder)
Tomasz Adamusiak
Ele Holloway
internal carotid artery stenosis
ICA - Internal carotid artery stenosis
SNOMEDCT:233964008
CHEBI:48028
[H][C@]12CCCN1C(=O)[C@H](CCCCCC(=O)C1CO1)NC(=O)[C@@H](C)NC(=O)[C@H](C)NC2=O
InChIKey=GNYCTMYOHGBSBI-SWJGNPKQDK
InChI=1/C21H32N4O6/c1-12-18(27)22-13(2)19(28)24-14(7-4-3-5-9-16(26)17-11-31-17)21(30)25-10-6-8-15(25)20(29)23-12/h12-15,17H,3-11H2,1-2H3,(H,22,27)(H,23,29)(H,24,28)/t12-,13+,14-,15+,17?/m0/s1/f/h22-24H
http://www.ebi.ac.uk/efo/EFO_0001551
HC toxin
http://en.wikipedia.org/wiki/BALB/c
NIFSTD:birnlex_206
BALB/c is a mouse strain of albion mice.
BALB/c
Tomasz Adamusiak
James Malone
An individual who does some experimental process.
experiment performer
James Malone
GM07357
James Malone
A docosenoic acid that has formula C22H42O2.
InChI=1/C12H23NO2/c1-10(2)6-13-7-11(3,4)9-15-12(13,5)14-8-10/h6-9H2,1-5H3
3,3,7,7,9a-pentamethyltetrahydro-2H,6H-[1,3]oxazino[2,3-b][1,3]oxazine
James Malone
http://www.ebi.ac.uk/efo/EFO_0001878
3,3,6,6,8a-pentamethyltetrahydro-1,8-dioxa-4a-azanaphthalene
An oxazinooxazine that has formula C12H23NO2.
(13Z)-docos-13-enoic acid
CHEBI:4836
3,3,6,6,8a-Pentamethyl-tetrahydro-1,8-dioxa-4a-aza-naphthalene
erucic acid
amphiprotic solvent
InChIKey=HXCGBGUJRISVDD-UHFFFAOYAH
3,3,6,6,8a-pentamethyl-1,8-dioxaquinolizidine
C12H23NO2
CC1(C)COC2(C)OCC(C)(C)CN2C1
ZFS:0000014
blastula sphere
James Malone
MO_475
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#software_manufacturer
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#software_manufacturer[accessedResource: MO_475][accessDate: 04-11-2010]
software manufacturer
Tomasz Adamusiak
embryonic day 18.5
Tomasz Adamusiak
Jie Zheng
5637
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158627&type=germplasm
CS57603 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158627&type=germplasm
CS57603
James Malone
Brachiocephalic trunk
Innominate artery
Innominate artery[accessedResource: FMAID:3932][accessDate: 04-11-2010]
Brachiocephalic trunk[accessedResource: FMAID:3932][accessDate: 04-11-2010]
FMAID:3932
Tomasz Adamusiak
Jie Zheng
brachiocephalic artery
T98G cell[accessedResource: BTO:0001583][accessDate: 04-11-2010]
James Malone
BTO:0001583
Human, Caucasian, glioblastoma cell line.
Ele Holloway
T98G
T-98G cell[accessedResource: BTO:0001583][accessDate: 04-11-2010]
T98G cell
T-98G cell
MCC:0000457
Human, Caucasian, glioblastoma cell line.[accessedResource: BTO:0001583][accessDate: 04-11-2010]
human umbilical vein endothelial cell[accessedResource: BTO:0001949][accessDate: 04-11-2010]
HUVEC cell
A convenient source of human endothelial cells are those that line the large vein in the umbilical cord which is usually discarded together with the placenta after childbirth. The cells can be removed as a fairly pure suspension by mild enzymatic treatment of the vein followed by some mechanical distraction and will grow relatively easily in culture, retaining their differentiated characteristics for several passages.[accessedResource: BTO:0001949][accessDate: 04-11-2010]
Tomasz Adamusiak
HUVEC
A convenient source of human endothelial cells are those that line the large vein in the umbilical cord which is usually discarded together with the placenta after childbirth. The cells can be removed as a fairly pure suspension by mild enzymatic treatment of the vein followed by some mechanical distraction and will grow relatively easily in culture, retaining their differentiated characteristics for several passages.
human umbilical vein endothelial cell
HUVEC[accessedResource: BTO:0001949][accessDate: 04-11-2010]
BTO:0001949
assay by molecule
endocrine system
Endocrine system (all sites)[accessedResource: NCIt:C12705][accessDate: 04-11-2010]
Metabolic/Endocrine Body System
Hormonal System
Endocrine/Metabolic Organ System[accessedResource: NCIt:C12705][accessDate: 04-11-2010]
FMAID:9668
Endocrine/Metabolic Organ System
Hormonal System[accessedResource: NCIt:C12705][accessDate: 04-11-2010]
NCIt:C12705
Endocrine system (all sites)
Collective designation for those tissues capable of secreting hormones.[accessedResource: NCIt:C12705][accessDate: 04-11-2010]
Collective designation for those tissues capable of secreting hormones.
Body System, Endocrine/Metabolic[accessedResource: NCIt:C12705][accessDate: 04-11-2010]
Systema endocrinum
Systema endocrinum[accessedResource: FMAID:9668][accessDate: 04-11-2010]
2.0.1
true
Strain or line specific to mouse
obsolete_mouse strain
James Malone
consolidation of strains with organism taxon. mouse strain subclasses are moved to mus musculus subclasses
http://www.arabidopsis.org/servlets/TairObject?id=1005158782&type=germplasm
CS57758 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158782&type=germplasm
CS57758
James Malone
GM06985
James Malone
DMS-53
DMS53
James Malone
Ele Holloway
embryonic day 18
Tomasz Adamusiak
Jie Zheng
NCIt:C41219
Native Hawaiian or Other Pacific Islander
Denotes a person having origins in any of the original peoples of Hawaii, Guam, Samoa, or other Pacific Islands. The term covers particularly people who identify themselves as part-Hawaiian, Native Hawaiian, Guamanian or Chamorro, Carolinian, Samoan, Chuukese (Trukese), Fijian, Kosraean, Melanesian, Micronesian, Northern Mariana Islander, Palauan, Papua New Guinean, Pohnpeian, Polynesian, Solomon Islander, Tahitian, Tokelauan, Tongan, Yapese, or Pacific Islander, not specified.
Native Hawaiian or Other Pacific Islander[accessedResource: NCIt:C41219][accessDate: 04-11-2010]
Denotes a person having origins in any of the original peoples of Hawaii, Guam, Samoa, or other Pacific Islands. The term covers particularly people who identify themselves as part-Hawaiian, Native Hawaiian, Guamanian or Chamorro, Carolinian, Samoan, Chuukese (Trukese), Fijian, Kosraean, Melanesian, Micronesian, Northern Mariana Islander, Palauan, Papua New Guinean, Pohnpeian, Polynesian, Solomon Islander, Tahitian, Tokelauan, Tongan, Yapese, or Pacific Islander, not specified.[accessedResource: NCIt:C41219][accessDate: 04-11-2010]
Asian/Pacific Islander
Tomasz Adamusiak
mitochondrial respiratory chain inhibitors
mitochondrial electron-transport chain inhibitor
mitochondrial electron transport chain inhibitors
http://www.ebi.ac.uk/efo/EFO_0001827
CHEBI:25355
mitochondrial respiratory-chain inhibitor
James Malone
NCIt:C32161
myotome somite 14[accessedResource: ZFA:0000044][accessDate: 04-11-2010]
James Malone
Aschoff-Tawara node[accessedResource: FMAID:9478][accessDate: 04-11-2010]
AV nodal muscle tissue
Subdivision of conducting system of heart which is located in the muscular part of the interatrial septum that is continuous with the atrioventricular bundle.
MAT:0000498
atriovetricular node[accessedResource: TAO:0005070][accessDate: 04-11-2010]
A-V Node
MA:0000095
A-V Node[accessedResource: NCIt:C32161][accessDate: 04-11-2010]
FMAID:9478
atriovetricular node
Node of Tawara[accessedResource: FMAID:9478][accessDate: 04-11-2010]
atrioventricular node
ZFA:0000044
Atrioventricular nodal muscle tissue
AV nodal muscle tissue[accessedResource: FMAID:9478][accessDate: 04-11-2010]
TAO:0005070
Portion of the somite giving rise to body wall muscle masses.
Aschoff-Tawara node
AV node[accessedResource: FMAID:9478][accessDate: 04-11-2010]
Portion of the somite giving rise to body wall muscle masses.[accessedResource: ZFA:0000044][accessDate: 04-11-2010]
Node of Tawara
myotome somite 14
AV node
Atrioventricular nodal muscle tissue[accessedResource: FMAID:9478][accessDate: 04-11-2010]
NCIt:C32446
deltoid
James Malone
CHEBI:50295
InChIKey=ZKZMDXUDDJYAIB-SUCLLAFCBT
InChI=1/C22H34O5/c1-8-20(5)12-14(24)16-21(6)11-9-10-19(3,4)17(21)15(25)18(26-13(2)23)22(16,7)27-20/h8,15-18,25H,1,9-12H2,2-7H3/t15-,16+,17-,18-,20-,21+,22-/m0/s1
C22H34O5
(3R,4aS,5S,6S,6aS,10aS,10bR)-5-(acetyloxy)-3-ethenyldodecahydro-6-hydroxy-3,4a,7,7,10a-pentamethyl-1H-naphtho(2,1-b)pyran-1-one
7beta-acetoxy-8,13-epoxy-6beta-hydroxylabd-14-en-11-one
Ele Holloway
(3R,4aS,5S,6S,6aS,10aS,10bR)-3-ethenyl-6-hydroxy-3,4a,7,7,10a-pentamethyl-1-oxododecahydro-1H-benzo[f]chromen-5-yl acetate
James Malone
(3R-(3alpha,4abeta,5beta,6beta,6aalpha,10abeta,10balpha))-5-(acetyloxy)-3-ethenyldodecahydro-6-hydroxy-3,4a,7,7,10a-pentamethyl-1H-naphtho(2,1-b)pyran-1-one
1,9-dideoxyforskolin
http://www.ebi.ac.uk/efo/EFO_0002484
A labdane diterpenoid that has formula C22H34O5.
[H][C@@]12[C@H](O)[C@H](OC(C)=O)[C@@]3(C)O[C@](C)(CC(=O)[C@]3([H])[C@@]1(C)CCCC2(C)C)C=C
267B1 Ki-ras
James Malone
A class of large neuroglial (macroglial) cells in the central nervous system - the largest and most numerous neuroglial cells in the brain and spinal cord. Astrocytes (from "star" cells) are irregularly shaped with many long processes, including those with "end feet" which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and "reactive astrocytes" (along with microglia) respond to injury (MSH).
astrocyte
Tomasz Adamusiak
James Malone
NIFSTD:sao1394521419
cells) are irregularly shaped with many long processes, including those with "end feet" which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and
A class of large neuroglial (macroglial) cells in the central nervous system - the largest and most numerous neuroglial cells in the brain and spinal cord. Astrocytes (from "star" cells) are irregularly shaped with many long processes, including those with "end feet" which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and "reactive astrocytes" (along with microglia) respond to injury (MSH).[accessedResource: NIFSTD:sao1394521419][accessDate: 04-11-2010]
A class of large neuroglial (macroglial) cells in the central nervous system - the largest and most numerous neuroglial cells in the brain and spinal cord. Astrocytes (from 'star' cells) are irregularly shaped with many long processes, including those with 'end feet' which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and 'reactive astrocytes' (along with microglia) respond to injury.
A class of large neuroglial (macroglial) cells in the central nervous system - the largest and most numerous neuroglial cells in the brain and spinal cord. Astrocytes (from 'star' cells) are irregularly shaped with many long processes, including those with 'end feet' which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and 'reactive astrocytes' (along with microglia) respond to injury.[accessedResource: CL:0000127][accessDate: 04-11-2010]
CL:0000127
Malme3M
James Malone
Ele Holloway
COLO201
James Malone
Ele Holloway
TH-2
leaf's response to physical damage by a caterpillar on a plant leaf
Physiological response to e.g. leaf's response to physical damage by a caterpillar on a plant leaf
damage response
James Malone
Nodose ganglion
Ganglion inferius (Nervus vagus)
FMA:6230
Tenth cranial nerve nodose ganglion
James Malone
Ele Holloway
Vagus nerve nodose ganglion
Vagus nerve inferior ganglion
Inferior ganglion of vagus
inferior ganglion of vagus nerve
MCC:0000105
CMK
Tomasz Adamusiak
COLO668
James Malone
Ele Holloway
NCI-H1436
James Malone
Ele Holloway
Corneoscleral Limbus
Corneoscleral junction
FMA:58342
Corneoscleral Limbus[accessedResource: NCIt:C12823][accessDate: 04-11-2010]
James Malone
Limbus of cornea
Corneoscleral junction[accessedResource: FMA:58342][accessDate: 04-11-2010]
corneal limbus
Sclerocorneal junction
NCIt:C12823
Eukaryota
Eucaryotae
Tomasz Adamusiak
Eucaryotae[accessedResource: NIFSTD:birnlex_399][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0001449
NIFSTD:birnlex_399
eucaryotes
Eukarya[accessedResource: NIFSTD:birnlex_399][accessDate: 04-11-2010]
eucaryotes[accessedResource: NIFSTD:birnlex_399][accessDate: 04-11-2010]
Eukarya
James Malone
nervous system cell
HCC1937
James Malone
CL:0000023
A female germ cell that has entered meiosis.
A female germ cell that has entered meiosis.[accessedResource: CL:0000023][accessDate: 04-11-2010]
oocyte
Tomasz Adamusiak
SKUT1
James Malone
Ele Holloway
1.8
true
obsolete_Wi38
James Malone
Ele Holloway
Duplicate use EFO_0001260
embryo late (growth) stage[accessedResource: MAT:0000399][accessDate: 04-11-2010]
embryo late (growth) stage
EVM:2990031
fetus
MAT:0000399
FBdv:0005333
James Malone
EV:0300011
JAX:100007
CB6F1 is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/100007.html
CB6F1
James Malone
http://jaxmice.jax.org/strain/009291.html
ILSXISS110/TejJ
Tomasz Adamusiak
GeneRIF:12594292
GeneRIF:14502291
HIV Infection
Infections, HTLV-III-LAV[accessedResource: MSH:D015658][accessDate: 04-11-2010]
GeneRIF:15556689
GeneRIF:12482395
GeneRIF:12900520
GeneRIF:12514416
GeneRIF:15057492
HIV INFECT[accessedResource: MSH:D015658][accessDate: 04-11-2010]
Includes the spectrum of human immunodeficiency virus infections that range from asymptomatic seropositivity, thru AIDS-related complex (ARC), to acquired immunodeficiency syndrome (AIDS).[accessedResource: MSH:D015658][accessDate: 04-11-2010]
GeneRIF:15018667
GeneRIF:12713059
GeneRIF:12964117
An infection caused by the human immunodeficiency virus.[accessedResource: NCIt:C3108][accessDate: 04-11-2010]
GeneRIF:15735450
GeneRIF:12468426
HUMAN IMMUNOdeficiency VIRUS [HIV] INFECTION
GeneRIF:15829920
GeneRIF:12639247
[X]Human immunodeficiency virus disease[accessedResource: SNOMEDCT:187438009][accessDate: 04-11-2010]
GeneRIF:15741250
GeneRIF:11834941
GeneRIF:12131187
Human immunodeficiency virus disease[accessedResource: DOID:526][accessDate: 04-11-2010]
GeneRIF:14501804
Human immunodeficiency virus [HIV] disease[accessedResource: DOID:526][accessDate: 04-11-2010]
SNOMEDCT:86406008
GeneRIF:15452260
Infections, HIV
MSH:D015658
Human immunodeficiency virus disease
GeneRIF:15869407
GeneRIF:12803993
GeneRIF:11983108
GeneRIF:15564514
GeneRIF:12767990
GeneRIF:14984591
An infection caused by the human immunodeficiency virus.
T LYMPHOTROPIC VIRUS TYPE III INFECT HUMAN
GeneRIF:16284526
GeneRIF:12510154
GeneRIF:15297876
GeneRIF:11466339
Human immunodeficiency virus infection (disorder)
GeneRIF:12751031
GeneRIF:12531788
GeneRIF:12610138
GeneRIF:12586555
GeneRIF:12640191
NCIt:C3108
GeneRIF:15555533
GeneRIF:15708596
HIV infectious disease[accessedResource: DOID:526][accessDate: 04-11-2010]
GeneRIF:12847229
GeneRIF:15864119
GeneRIF:15319853
Human immunodeficiency virus infection
SNOMEDCT:187453001
GeneRIF:15702055
GeneRIF:14978126
GeneRIF:12884293
[X]Unspecified human immunodeficiency virus [HIV] disease
Includes the spectrum of human immunodeficiency virus infections that range from asymptomatic seropositivity, thru AIDS-related complex (ARC), to acquired immunodeficiency syndrome (AIDS).
HTLV WIII LAV INFECTIONS[accessedResource: MSH:D015658][accessDate: 04-11-2010]
[X]Unspecified human immunodeficiency virus [HIV] disease (disorder)[accessedResource: SNOMEDCT:187453001][accessDate: 04-11-2010]
GeneRIF:15661918
HUMAN IMMUNODEFICIENCY VIRUS [HIV] INFECTION[accessedResource: ICD9:042-042.99][accessDate: 04-11-2010]
HTLV III LAV INFECT
HIV
GeneRIF:15879099
Unspecified human immunodeficiency virus [HIV] disease (disorder)
HTLV WIII LAV INFECTIONS
HUMAN IMMUNO VIRUS DIS[accessedResource: ICD9:042][accessDate: 04-11-2010]
GeneRIF:11862398
Human immunodeficiency virus infection[accessedResource: DOID:526][accessDate: 04-11-2010]
Human immunodeficiency virus infection (disorder)[accessedResource: SNOMEDCT:86406008][accessDate: 04-11-2010]
GeneRIF:15660419
GeneRIF:12645627
ICD9:042
HTLV III LAV INFECT[accessedResource: MSH:D015658][accessDate: 04-11-2010]
GeneRIF:15737629
[X]Human immunodeficiency virus disease (disorder)
GeneRIF:12815099
LYMPHOTROPIC VIRUS TYPE III INFECTIONS HUMAN T[accessedResource: MSH:D015658][accessDate: 04-11-2010]
HTLV-III Infection
GeneRIF:12513914
T LYMPHOTROPIC VIRUS TYPE III INFECT HUMAN[accessedResource: MSH:D015658][accessDate: 04-11-2010]
GeneRIF:15242539
Human immunodeficiency virus infection, NOS[accessedResource: SNOMEDCT:86406008][accessDate: 04-11-2010]
GeneRIF:15585099
GeneRIF:12202149
HIV Infections[accessedResource: MSH:D015658][accessDate: 04-11-2010]
HIV infectious disease
GeneRIF:15326605
GeneRIF:15985194
GeneRIF:16156786
GeneRIF:15751767
GeneRIF:12193696
GeneRIF:12167863
GeneRIF:15535131
GeneRIF:15596839
GeneRIF:11801693
human immunodeficiency virus
GeneRIF:15541354
HTLV-III Infections[accessedResource: MSH:D015658][accessDate: 04-11-2010]
HTLV-III-LAV Infection[accessedResource: MSH:D015658][accessDate: 04-11-2010]
James Malone
GeneRIF:16136472
GeneRIF:12834106
GeneRIF:14501803
GeneRIF:15272203
GeneRIF:12769187
GeneRIF:14764743
HTLV WIII INFECTIONS[accessedResource: MSH:D015658][accessDate: 04-11-2010]
GeneRIF:12515722
GeneRIF:14645006
GeneRIF:14687494
GeneRIF:11466389
Infection, HTLV-III[accessedResource: MSH:D015658][accessDate: 04-11-2010]
GeneRIF:14554087
GeneRIF:12639246
GeneRIF:15265023
GeneRIF:12960279
GeneRIF:11861282
GeneRIF:12100031
GeneRIF:12473840
HIV INFECT
GeneRIF:11709782
GeneRIF:11932418
GeneRIF:12192009
GeneRIF:15466648
GeneRIF:12829794
HUMAN IMMUNO VIRUS DIS
[X]Unspecified human immunodeficiency virus [HIV] disease (disorder)
GeneRIF:15128805
GeneRIF:12619446
GeneRIF:12237292
GeneRIF:12220649
GeneRIF:16015368
GeneRIF:14688346
GeneRIF:12427285
Infections, HTLV-III-LAV
[X]Human immunodeficiency virus disease (disorder)[accessedResource: SNOMEDCT:187438009][accessDate: 04-11-2010]
GeneRIF:12767998
SNOMEDCT:187438009
HTLV-III-LAV Infection
DOID:526
GeneRIF:12679439
GeneRIF:14985764
Human immunodeficiency virus disease (disorder)
Infections, HTLV-III
ICD9:042-042.99
GeneRIF:14983032
GeneRIF:12051740
Unspecified human immunodeficiency virus [HIV] disease (disorder)[accessedResource: DOID:526][accessDate: 04-11-2010]
GeneRIF:11937573
Human immunodeficiency virus infection, NOS
GeneRIF:15175077
Human immunodeficiency virus [HIV] disease
HTLV WIII INFECTIONS
HIV Infection[accessedResource: MSH:D015658][accessDate: 04-11-2010]
HTLV III INFECT[accessedResource: MSH:D015658][accessDate: 04-11-2010]
GeneRIF:15181567
GeneRIF:12368356
T Lymphotropic Virus Type III Infections, Human
GeneRIF:15192272
GeneRIF:12552446
GeneRIF:16081817
GeneRIF:15117454
GeneRIF:15821887
Human immunodeficiency virus disease (disorder)[accessedResource: DOID:526][accessDate: 04-11-2010]
GeneRIF:12757260
GeneRIF:15156567
[X]Human immunodeficiency virus disease
HTLV III INFECT
[X]Unspecified human immunodeficiency virus [HIV] disease[accessedResource: SNOMEDCT:187453001][accessDate: 04-11-2010]
GeneRIF:14523459
GeneRIF:15213099
Myeloid Leukemia, Philadelphia-Positive
GeneRIF:12576428
GeneRIF:11937267
Leukemia, Myelogenous, Ph1-Positive
Clonal hematopoetic disorder caused by an acquired genetic defect in PLURIPOTENT STEM CELLS. It starts in MYELOID CELLS of the bone marrow, invades the blood and then other organs. The condition progresses from a stable, more indolent, chronic phase (LEUKEMIA, MYELOID, CHRONIC PHASE) lasting up to 7 years, to an advanced phase composed of an accelerated phase (LEUKEMIA, MYELOID, ACCELERATED PHASE) and BLAST CRISIS.
LEUKEMIA PHILA POS[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Leukemias, Chronic Myeloid
CML in Remission[accessedResource: DOID:8552][accessDate: 10-05-2010]
ICD9:205.1
chronic myeloid leukemia, disease (disorder)
GeneRIF:15790787
GeneRIF:12351404
chronic myeloid leukemia NOS (disorder)[accessedResource: DOID:8552][accessDate: 10-05-2010]
CML[accessedResource: DOID:8552][accessDate: 10-05-2010]
GeneRIF:12734675
chronic myeloid leukemia in remission (disorder)[accessedResource: DOID:8552][accessDate: 10-05-2010]
GeneRIF:15716990
Myeloid Leukemias, Philadelphia-Positive
chronic myeloid leukemia in remission[accessedResource: DOID:8552][accessDate: 10-05-2010]
chronic myeloid leukemia without mention of remission
GeneRIF:15676212
chronic myeloid leukaemia
Leukemias, Ph1-Positive Myeloid[accessedResource: MSH:D015464][accessDate: 10-05-2010]
MSH:D015464
Leukemia, Ph1-Positive Myelogenous[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:15556610
GeneRIF:12821944
chronic myelogenous leukemia, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:8552][accessDate: 10-05-2010]
GeneRIF:12130516
Myelogenous Leukemias, Chronic[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:15481444
Clonal hematopoetic disorder caused by an acquired genetic defect in PLURIPOTENT STEM CELLS. It starts in MYELOID CELLS of the bone marrow, invades the blood and then other organs. The condition progresses from a stable, more indolent, chronic phase (LEUKEMIA, MYELOID, CHRONIC PHASE) lasting up to 7 years, to an advanced phase composed of an accelerated phase (LEUKEMIA, MYELOID, ACCELERATED PHASE) and BLAST CRISIS.[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:15583852
chronic myeloid leukemia in remission (disorder)
Leukemia, Myelogenous, Chronic, BCR-ABL Positive
GeneRIF:12505259
GeneRIF:14656881
Obsolete: Duplication: use EFO_0000339 instead
Myeloid Leukemia, chronic[accessedResource: DOID:8552][accessDate: 10-05-2010]
CML
Leukemia, Myelogenous, Chronic, BCR-ABL Positive[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Leukemia, Chronic Granulocytic[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:12144533
Myelogenous Leukemias, Ph1-Positive
Ph1-Positive Myeloid Leukemias
GeneRIF:15388581
chronic myeloid leukaemia[accessedResource: DOID:8552][accessDate: 10-05-2010]
chronic myelogenous leukemia, no ICD-O subtype (morphologic abnormality)
Leukemia, Myeloid, Ph1 Positive
true
Leukemia, Myeloid, Ph1 Positive[accessedResource: MSH:D015464][accessDate: 10-05-2010]
CML - chronic Myelogenous Leukemia
Chronic Granulocytic Leukemia
CML - chronic Myelogenous Leukemia[accessedResource: DOID:8552][accessDate: 10-05-2010]
Myelogenous Leukemias, Ph1-Positive[accessedResource: MSH:D015464][accessDate: 10-05-2010]
chronic myeloid leukemia in remission
chronic myeloid leukemia, disease (disorder)[accessedResource: DOID:8552][accessDate: 10-05-2010]
GeneRIF:15735728
CML in Remission
GeneRIF:11830496
GeneRIF:11861294
Chronic Myelocytic Leukemias
GeneRIF:16361542
GeneRIF:15167915
Myelogenous Leukemia, Chronic
GeneRIF:12393722
James Malone
GeneRIF:12576338
Leukemias, Philadelphia-Positive Myeloid[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:15621754
chronic myeloid leukemia NOS (disorder)
Leukemia, Myelogenous, Chronic[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Leukemias, Chronic Myelocytic[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:12964051
Myeloid Leukemia, Chronic
GeneRIF:15569990
Granulocytic Leukemias, Chronic
Chronic Granulocytic Leukemias[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Leukemia, Myeloid, Philadelphia Positive[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Chronic Myelocytic Leukemia[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:12408765
DOID:8552
obsolete_chronic myeloid leukemia
GeneRIF:15626746
GeneRIF:12740446
chronic myeloid leukemia without mention of remission[accessedResource: DOID:8552][accessDate: 10-05-2010]
LEUKEMIA PHILA POS
Myelogenous Leukemias, Chronic
Chronic Myeloid Leukemias[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Leukemia, Myelocytic, Chronic
GeneRIF:14586403
ZFS:0000005
cleavage 16-cell
James Malone
GATA-1-null erythroblast cell line
G1E
A GATA-1-null erythroblast is a cell line.
A g1e er4 is a GATA-1-null erythroblast.
Natural Language Generator 8th April 2010
http://www.ebi.ac.uk/efo/EFO_0001791
true
James Malone
A minute is a derived time unit which is equal to 60 seconds.
min
UO:0000031
minute
A time unit which is equal to 60 seconds.
Location of cancer, primary or metastatic
Jie Zheng
James Malone
cancer site
MO_26
This will be obsoleted in near future.
Tomasz Adamusiak
NCI-H2009
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158734&type=germplasm
CS57710 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158734&type=germplasm
CS57710
James Malone
red junglefowl
chicken
http://www.ebi.ac.uk/efo/EFO_0002640
Gallus gallus
James Malone
Upper limb girdle[accessedResource: FMAID:23217][accessDate: 04-11-2010]
Subdivision of free upper limb, which is the proximal segment of an upper limb and links the free upper limb to the trunk; it is demarcated by the plane of the surface of the glenoid fossa from the free upper limb; together with the free upper limb, it constitutes the upper limb. Examples: There are only two instances, right and left pectoral girdles.
MA:0000292
Upper limb girdle
Shoulder girdle[accessedResource: FMAID:23217][accessDate: 04-11-2010]
James Malone
Shoulder girdle
FMAID:23217
MAT:0000181
shoulder bones
pectoral girdle
EMAPA:18025
EHDAA:6039
shoulder bones[accessedResource: MAT:0000181][accessDate: 04-11-2010]
roof rat
house rat
black rat
http://www.ebi.ac.uk/efo/EFO_0002654
Rattus rattus
James Malone
chromium atom
cromo
http://www.ebi.ac.uk/efo/EFO_0001505
Chrom
A chromium group element atom that has formula Cr.
InChI=1/Cr
[Cr]
InChIKey=VYZAMTAEIAYCRO-UHFFFAOYAB
24Cr
CHEBI:28073
A chromium group element that has formula Cr.
chromium
James Malone
chrome
true
obsolete_clinical information
FMAID:9671
James Malone
EV:0100049
A clear, watery, sometimes faintly yellowish fluid derived from body tissues that contains white blood cells and circulates throughout the lymphatic system, returning to the venous bloodstream through the thoracic duct. Lymph acts to remove bacteria and certain proteins from the tissues, transport fat from the small intestine, and supply mature lymphocytes to the blood.[accessedResource: BTO:0000855][accessDate: 04-11-2010]
Transudate contained in the lumen of lymphatic vessel.
BTO:0000855
A clear, watery, sometimes faintly yellowish fluid derived from body tissues that contains white blood cells and circulates throughout the lymphatic system, returning to the venous bloodstream through the thoracic duct. Lymph acts to remove bacteria and certain proteins from the tissues, transport fat from the small intestine, and supply mature lymphocytes to the blood.
MAT:0000055
lymph
MA:0002520
urocortin II
R43
James Malone
MO_772
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#operon_identification_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#operon_identification_design[accessedResource: MO_772][accessDate: 04-11-2010]
operon identification design
Tomasz Adamusiak
James Malone
Natural Language Generator 8th April 2010
A NCI H929 is a cell line.
A NCI H929 is all of the following: something that is bearer of a multiple myeloma, something that derives
from a B cell, and something that derives from a bone marrow.
NCI-H929
GeneRIF:15469899
SNOMEDCT:21708004
A malignant mesenchymal tumor arising from the bone.[accessedResource: NCIt:C9312][accessDate: 04-11-2010]
osteoid sarcoma
GeneRIF:15221963
NCIt:C9312
GeneRIF:14719070
GeneRIF:14704791
Osteochondrosarcoma[accessedResource: SNOMEDCT:21708004][accessDate: 04-11-2010]
GeneRIF:11776394
GeneRIF:12376862
GeneRIF:12709413
NCIt:C9145
GeneRIF:13678785
GeneRIF:15870699
Osteosarcoma of bone (disorder)
A sarcoma originating in bone-forming cells, affecting the ends of long bones. It is the most common and most malignant of sarcomas of the bones, and occurs chiefly among 10- to 25-year-old youths. (From Stedman, 25th ed)[accessedResource: MSH:D012516][accessDate: 04-11-2010]
GeneRIF:12544770
Osteosarcomas
Sarcoma of the Bone[accessedResource: NCIt:C9312][accessDate: 04-11-2010]
GeneRIF:12009018
GeneRIF:15026342
GeneRIF:14584080
James Malone
GeneRIF:12479099
Sarcomas, Osteogenic
Osseous Sarcoma
GeneRIF:11606061
Osteosarcoma, no ICD-O subtype
GeneRIF:15796961
GeneRIF:11920494
GeneRIF:12393937
Skeletal Sarcoma[accessedResource: NCIt:C9312][accessDate: 04-11-2010]
GeneRIF:15662138
GeneRIF:12660817
GeneRIF:14524531
Bone Sarcoma[accessedResource: NCIt:C9312][accessDate: 04-11-2010]
GeneRIF:15488761
osteosarcoma
GeneRIF:14710359
GeneRIF:12154052
GeneRIF:12209731
Osteosarcomas[accessedResource: MSH:D012516][accessDate: 04-11-2010]
GeneRIF:15609301
Osteogenic Sarcoma
GeneRIF:15448009
GeneRIF:15900593
A malignant mesenchymal tumor arising from the bone.
Osteochondrosarcoma
Osteosarcoma of bone[accessedResource: SNOMEDCT:307576001][accessDate: 04-11-2010]
Sarcoma of the Bone
Sarcoma of Bone
SNOMEDCT:307576001
GeneRIF:14645574
Osteoblastic sarcoma[accessedResource: SNOMEDCT:21708004][accessDate: 04-11-2010]
Osteogenic sarcoma, NOS[accessedResource: SNOMEDCT:21708004][accessDate: 04-11-2010]
GeneRIF:15814634
Osteosarcoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:3347][accessDate: 04-11-2010]
GeneRIF:11746983
GeneRIF:11943335
Osseous Sarcoma[accessedResource: NCIt:C9312][accessDate: 04-11-2010]
GeneRIF:15310147
GeneRIF:15201972
Osteosarcoma, no ICD-O subtype[accessedResource: SNOMEDCT:21708004][accessDate: 04-11-2010]
GeneRIF:12237108
GeneRIF:15145525
Osteosarcoma, NOS
GeneRIF:15583032
GeneRIF:15087387
Bone Sarcoma
Osteoblastic osteosarcoma
GeneRIF:14679136
MSH:D012516
GeneRIF:16087680
GeneRIF:15476586
GeneRIF:12972634
Skeletal Sarcoma
GeneRIF:15701832
GeneRIF:15580288
GeneRIF:14528100
Osteoblastic sarcoma
Osteoblastic osteosarcoma[accessedResource: SNOMEDCT:21708004][accessDate: 04-11-2010]
GeneRIF:14598886
GeneRIF:16035619
[M]Osteosarcoma NOS
GeneRIF:12054567
GeneRIF:12663494
Osteosarcoma of bone
DOID:3347
Osteosarcoma - disorder
A usually aggressive malignant bone-forming mesenchymal tumor, predominantly affecting adolescents and young adults. It usually involves bones and less frequently extraosseous sites. It often involves the long bones (particularly distal femur, proximal tibia, and proximal humerus). Pain with or without a palpable mass is the most frequent clinical symptom. It may spread to other anatomic sites, particularly the lungs.[accessedResource: NCIt:C9145][accessDate: 04-11-2010]
Osteogenic sarcoma, NOS
Sarcoma of Bone[accessedResource: NCIt:C9312][accessDate: 04-11-2010]
Osteosarcoma, NOS[accessedResource: SNOMEDCT:21708004][accessDate: 04-11-2010]
A sarcoma originating in bone-forming cells, affecting the ends of long bones. It is the most common and most malignant of sarcomas of the bones, and occurs chiefly among 10- to 25-year-old youths. (From Stedman, 25th ed)
Osteogenic Sarcomas[accessedResource: MSH:D012516][accessDate: 04-11-2010]
GeneRIF:15668906
GeneRIF:12792742
GeneRIF:15922739
GeneRIF:12788094
Osteosarcoma of bone (disorder)[accessedResource: SNOMEDCT:307576001][accessDate: 04-11-2010]
GeneRIF:11927012
GeneRIF:16328004
GeneRIF:16157226
GeneRIF:15210853
[M]Osteosarcoma NOS[accessedResource: SNOMEDCT:21708004][accessDate: 04-11-2010]
GeneRIF:15719069
Osteosarcoma - disorder[accessedResource: SNOMEDCT:307576001][accessDate: 04-11-2010]
GeneRIF:16010425
Osteosarcoma, no ICD-O subtype (morphologic abnormality)
osteoid sarcoma[accessedResource: DOID:3347][accessDate: 04-11-2010]
Osteogenic Sarcoma[accessedResource: MSH:D012516][accessDate: 04-11-2010]
A usually aggressive malignant bone-forming mesenchymal tumor, predominantly affecting adolescents and young adults. It usually involves bones and less frequently extraosseous sites. It often involves the long bones (particularly distal femur, proximal tibia, and proximal humerus). Pain with or without a palpable mass is the most frequent clinical symptom. It may spread to other anatomic sites, particularly the lungs.
MA:0000129
TAO:0001081
thyroid primordium[accessedResource: MAT:0000081][accessDate: 04-11-2010]
BTO:0001379
SAEL:108
thyroid follicle[accessedResource: ZFA:0001072][accessDate: 04-11-2010]
EV:0100133
FMAID:9603
A two-lobed endocrine gland found in all vertebrates, located in front of and on either side of the trachea in humans, and producing various hormones, such as triiodothyronine and calcitonin.
thyroid follicle
thyroid primordium
ZFA:0001072
Lobular organ the parenchyma of which consists of ductless, glandular follicles filled with colloid. Examples: thyroid gland proper, accessory thyroid gland, lingual thyroid gland.
A two-lobed endocrine gland found in all vertebrates, located in front of and on either side of the trachea in humans, and producing various hormones, such as triiodothyronine and calcitonin.[accessedResource: BTO:0001379][accessDate: 04-11-2010]
thyroid follicles
thyroid gland[accessedResource: BTO:0001379][accessDate: 04-11-2010]
EMAPA:18827
thyroid
MAT:0000081
James Malone
thyroid gland
thyroid follicles[accessedResource: ZFA:0001072][accessDate: 04-11-2010]
XAO:0000162
EHDAA:2975
Derived from BFO: Occurrent
The life of an organism, a surgical operation as processual context for a nosocomical infection, the spatiotemporal context occupied by a process of cellular meiosis, the spatiotemporal region occupied by the development of a cancer tumor.
A temporal entity is an entity that has temporal parts and that happens, unfolds or develops through time. An occurrent is something which exists over time, rather than existing completely at many times
temporal measurement
James Malone
NCI-H661
James Malone
Ele Holloway
A malignant tumor arising from the embryonic remains of the notochord. It is also called chordocarcinoma, chordoepithelioma, and notochordoma. (Dorland, 27th ed)
A malignant tumor arising from the embryonic remains of the notochord. It is also called chordocarcinoma, chordoepithelioma, and notochordoma. (Dorland, 27th ed)[accessedResource: MSH:D002817][accessDate: 04-11-2010]
NCIt:C2947
Chordoma (morphologic abnormality)
Chordomas[accessedResource: MSH:D002817][accessDate: 04-11-2010]
DOID:3302
SNOMEDCT:50007008
Chordomas
A malignant bone tumor arising from the remnants of the fetal notochord. Although it can occur at all ages, it is more frequently seen in middle-aged adults. Most frequent sites of involvement are: sacrococcygeal area, spheno-occipital area, and the cervico-thoraco-lumbar spine. Microscopically, chordomas are composed of cells that form cords and lobules, separated by mucoid intercellular tissue. Some of the cells are large (physaliphorous) and have vacuolated cytoplasm and prominent vesicular nuclei. Other tumor cells are small with small nuclei without visible nucleoli. Chordomas tend to recur and may metastasize. The most common sites of metastasis are skin and bone.
A notochordal cancer that derives_from cellular remnants of the notochord.
MSH:D002817
Chordoma (morphologic abnormality)[accessedResource: SNOMEDCT:50007008][accessDate: 04-11-2010]
A notochordal cancer that derives_from cellular remnants of the notochord.[accessedResource: DOID:3302][accessDate: 04-11-2010]
James Malone
notochordoma
chordoma
GeneRIF:16288985
A malignant bone tumor arising from the remnants of the fetal notochord. Although it can occur at all ages, it is more frequently seen in middle-aged adults. Most frequent sites of involvement are: sacrococcygeal area, spheno-occipital area, and the cervico-thoraco-lumbar spine. Microscopically, chordomas are composed of cells that form cords and lobules, separated by mucoid intercellular tissue. Some of the cells are large (physaliphorous) and have vacuolated cytoplasm and prominent vesicular nuclei. Other tumor cells are small with small nuclei without visible nucleoli. Chordomas tend to recur and may metastasize. The most common sites of metastasis are skin and bone.[accessedResource: NCIt:C2947][accessDate: 04-11-2010]
notochordoma[accessedResource: DOID:3302][accessDate: 04-11-2010]
ZFS:0000008
blastula 128-cell
James Malone
Synovium
The inner layer of the connective tissue that seals the joint.
NCIt:C12473
The inner membrane of a joint capsule surrounding a freely movable joint. It is loosely attached to the external fibrous capsule and secretes synovial fluid. (MeSH)
synovial membrane
The inner layer of the connective tissue that seals the joint.[accessedResource: NCIt:C12473][accessDate: 04-11-2010]
James Malone
Synovium[accessedResource: NCIt:C12473][accessDate: 04-11-2010]
MO_899
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#array_platform_variation_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#array_platform_variation_design[accessedResource: MO_899][accessDate: 04-11-2010]
array platform variation design
Tomasz Adamusiak
anterior pituitary gland[accessedResource: BTO:0000040][accessDate: 04-11-2010]
James Malone
BTO:0000040
anterior lobe of pituitary
The anterior glandular lobe of the pituitary gland.[accessedResource: BTO:0000040][accessDate: 04-11-2010]
adenohypophysis
ZFA:0001282
The anterior glandular lobe of the pituitary gland.
anterior hypophysis
anterior pituitary gland
anterior lobe of pituitary[accessedResource: NIFSTD:birnlex_1581][accessDate: 04-11-2010]
NIFSTD:birnlex_1581
The anterior lobe of the hypophysis (pituitary gland). This lobe contains cells that produce prolactin, growth hormone, thyroid-stimulating hormone, follicle-stimulating hormone and proopiomelanocortin. In contrast to mammalian vertebrates, the adenohypophysis remains in a subepithelial position and there exists no equivalent of Rathke's pouch in zebrafish.[accessedResource: ZFA:0001282][accessDate: 04-11-2010]
anterior pituitary[accessedResource: ZFA:0001282][accessDate: 04-11-2010]
anterior hypophysis[accessedResource: ZFA:0001282][accessDate: 04-11-2010]
Tomasz Adamusiak
anterior pituitary
The anterior lobe of the hypophysis (pituitary gland). This lobe contains cells that produce prolactin, growth hormone, thyroid-stimulating hormone, follicle-stimulating hormone and proopiomelanocortin. In contrast to mammalian vertebrates, the adenohypophysis remains in a subepithelial position and there exists no equivalent of Rathke's pouch in zebrafish.
One of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord, and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera, and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter.[accessedResource: BTO:0001832][accessDate: 04-11-2010]
sympathetic chain
pns[accessedResource: ZFA:0000142][accessDate: 04-11-2010]
peripheral nervous system
Sympathetic part of autonomic division of nervous system
pns
Nervous structures including ganglia outside of the central nervous system.
Nervous structures including ganglia outside of the central nervous system.[accessedResource: ZFA:0000142][accessDate: 04-11-2010]
MA:0000225
sympathetic nervous system
XAO:0000211
James Malone
ZFA:0000142
TAO:0001576
PNS - sympathetic
One of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord, and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera, and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter.
PNS - sympathetic[accessedResource: MAT:0000100][accessDate: 04-11-2010]
peripheral nervous system[accessedResource: ZFA:0000142][accessDate: 04-11-2010]
Sympathetic part of autonomic division of nervous system[accessedResource: FMAID:9906][accessDate: 04-11-2010]
MAT:0000100
EHDAA:3769
FMAID:9906
sympathetic chain[accessedResource: MAT:0000100][accessDate: 04-11-2010]
EMAPA:16985
EV:0100374
BTO:0001832
MAT:0000237
seedhead
James Malone
JCRB0253
BTO:0002381
Well differentiated human gastric adenocarcinoma cell line.
MKN28
Well differentiated human gastric adenocarcinoma cell line.[accessedResource: BTO:0002381][accessDate: 04-11-2010]
MKN-28 cell[accessedResource: BTO:0002381][accessDate: 04-11-2010]
MKN28 cell
MKN28 cell[accessedResource: BTO:0002381][accessDate: 04-11-2010]
Ele Holloway
MKN-28 cell
MKN-28
James Malone
HepaRG
James Malone
Polysorbate
InChIKey=HMFKFHLTUCJZJO-UHFFFAOYAO
InChI=1/C26H50O10/c1-2-3-4-5-6-7-8-9-10-11-24(30)34-19-18-31-20-22(32-15-12-27)26-25(35-17-14-29)23(21-36-26)33-16-13-28/h22-23,25-29H,2-21H2,1H3
Tween 20
polysorbate 20
Polyoxyethylene sorbitan monolaurate
Polyoxyethylene (20) sorbitan monolaurate
A polymer composed of PEG-ylated sorbitan, where the total number of poly(ethylene glycol) units is 20 and a single terminal is capped by a dodecanoyl group.
NCIt:C81317
The time period after birth.
The stage of the mother from immediately after the birth of offspring and extending for about six weeks
The time period after birth.[accessedResource: NCIt:C81317][accessDate: 04-11-2010]
postnatal
FMAID:87217
descending thoracic aorta
Tomasz Adamusiak
Jie Zheng
NCI-H1838
James Malone
Ele Holloway
GeneRIF:12970064
LIPOMA NEC
Lipoma of unspecified body site[accessedResource: SNOMEDCT:93163002][accessDate: 04-11-2010]
Lipoma (disorder)[accessedResource: SNOMEDCT:93163002][accessDate: 04-11-2010]
DOID:9291
ICD9:214.8
Lipoma, unspecified site[accessedResource: ICD9:214.9][accessDate: 04-11-2010]
SNOMEDCT:189013001
[M]Lipoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189776008][accessDate: 04-11-2010]
SNOMEDCT:93163002
SNOMEDCT:46720004
Lipoma, no ICD-O subtype (morphologic abnormality)
Lipoma, unspecified site
Lipoma, no ICD-O subtype[accessedResource: SNOMEDCT:46720004][accessDate: 04-11-2010]
Lipoma of other specified sites (disorder)
ICD9:214
Lipoma of other specified sites
Lipoma of other specified sites (disorder)[accessedResource: SNOMEDCT:189013001][accessDate: 04-11-2010]
LIPOMA NOS
Lipoma of other skin and subcutaneous tissue[accessedResource: ICD9:214.1][accessDate: 04-11-2010]
Lipoma (clinical)
Lipoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:46720004][accessDate: 04-11-2010]
lipoma
Lipoma of unspecified body site
Lipoma, no ICD-O subtype
Lipoma NOS (disorder)
LIPOMA SKIN NEC[accessedResource: ICD9:214.1][accessDate: 04-11-2010]
Lipoma of other skin and subcutaneous tissue
Lipoma (disorder)
A benign, usually painless, well-circumscribed lipomatous tumor composed of adipose tissue.[accessedResource: NCIt:C3192][accessDate: 04-11-2010]
[M]Lipoma NOS[accessedResource: SNOMEDCT:189776008][accessDate: 04-11-2010]
Lipoma of other specified sites[accessedResource: ICD9:214.8][accessDate: 04-11-2010]
Lipoma, NOS[accessedResource: SNOMEDCT:46720004][accessDate: 04-11-2010]
[M]Lipoma NOS
ICD9:214.1
LIPOMA NEC[accessedResource: ICD9:214.8][accessDate: 04-11-2010]
NCIt:C3192
A benign, usually painless, well-circumscribed lipomatous tumor composed of adipose tissue.
James Malone
SNOMEDCT:189018005
[M]Lipoma NOS (morphologic abnormality)
Lipoma NOS (disorder)[accessedResource: SNOMEDCT:189018005][accessDate: 04-11-2010]
Lipoma (clinical)[accessedResource: SNOMEDCT:93163002][accessDate: 04-11-2010]
ICD9:214.9
LIPOMA SKIN NEC
SNOMEDCT:189776008
GM12878
NCI-H716
James Malone
Ele Holloway
GM12043
James Malone
http://en.wikipedia.org/wiki/Peritonitis#Septic_peritonitis
septic peritonitis
Tomasz Adamusiak
Ele Holloway
analyte role
http://www.ebi.ac.uk/efo/EFO_0001452
Analyte role is a role borne by a molecular entity and realized in an analyte assay which achieves the objective to measure the magnitude/concentration/amount of the analyte in the entity bearing evaluant role
Analyte role is a role borne by a material entity and realized by implementation of an analyte measuring assay with objective to detect the magnitude/concentration/ amount of the analyte in the entity bearing evaluant role.
analyte
James Malone
NIFSTD:sao-282380853
MAT:0000485
basal ganglia
Basal is a geometric modifier describing areas associated with the base of an organism or organism part. For example, basal ganglia.
basal
Tomasz Adamusiak
James Malone
GM11881
James Malone
MAT:0000276
leaf of a moss or liverwort
leaf of a moss or liverwort[accessedResource: MAT:0000276][accessDate: 04-11-2010]
phyllid
James Malone
Tomasz Adamusiak
pronormoblast[accessedResource: CL:0000547][accessDate: 04-11-2010]
An immature, nucleated erythrocyte occupying the stage of erythropoeisis that follows formation of erythroid progenitor cells. This cell is CD71-positive, has both a nucleus and a nucleolus, and lacks hematopoeitic lineage markers.[accessedResource: CL:0000547][accessDate: 04-11-2010]
proerythroblast
rubriblast[accessedResource: CL:0000547][accessDate: 04-11-2010]
CL:0000547
An immature, nucleated erythrocyte occupying the stage of erythropoeisis that follows formation of erythroid progenitor cells.
rubriblast
An immature, nucleated erythrocyte occupying the stage of erythropoeisis that follows formation of erythroid progenitor cells. This cell is CD71-positive, has both a nucleus and a nucleolus, and lacks hematopoeitic lineage markers.
pronormoblast
Jie Zheng
ArrayExpress production team
RNAi profiling is an assay in which double stranded RNA is synthesized with a sequence complementary to a gene(s) of interest and introduced into a cell or organism, where it is recognized as exogenous genetic material and activates the RNAi pathway resulting in knockdown of the transcripts and providing a means to study downstream changes in gene expression.
RNAi profiling by array
James Malone
NCI-H1623
James Malone
Ele Holloway
true
UO:0000001
http://www.ebi.ac.uk/efo/EFO_0001678
A length unit is a base unit which is a standard measure of the distance between two points.
A base unit which is a standard measure of the distance between two points.
length unit
James Malone
BTO:0000106
head ganglion
cranial ganglia
cranial ganglion
James Malone
Chromaffin Paraganglioma of the Adrenal Gland[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
Pheochromocytoma
Adrenal Gland Paraganglioma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
Phaeochromocytoma
Adrenal Gland Chromaffinoma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
Intraadrenal Paraganglioma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
Adrenal Medullary Pheochromocytoma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
Adrenal Gland Chromaffin Paraganglioma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
Adrenal Gland Paraganglioma
Adrenal Medullary Paraganglioma
Pheochromocytoma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
James Malone
Adrenal Pheochromocytoma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
A benign or malignant neuroendocrine neoplasm of the sympathetic nervous system that secretes catecholamines. It arises from the chromaffin cells of the adrenal medulla. Clinical presentation includes headaches, palpitations, chest and abdominal pain, hypertension, fever, and tremor. Microscopically, a characteristic nesting (zellballen) growth pattern is usually seen. Other growth patterns including trabecular pattern may also be present.[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
Chromaffin Paraganglioma of the Adrenal Gland
NCIt:C3326
A benign or malignant neuroendocrine neoplasm of the sympathetic nervous system that secretes catecholamines. It arises from the chromaffin cells of the adrenal medulla. Clinical presentation includes headaches, palpitations, chest and abdominal pain, hypertension, fever, and tremor. Microscopically, a characteristic nesting (zellballen) growth pattern is usually seen. Other growth patterns including trabecular pattern may also be present.
adrenal gland pheochromocytoma
Adrenal Medullary Pheochromocytoma
Adrenal Pheochromocytoma
Adrenal Gland Chromaffin Paraganglioma
Adrenal Gland Chromaffinoma
PCC
PCC[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
Adrenal Medullary Paraganglioma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
Intraadrenal Paraganglioma
Phaeochromocytoma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
GeneRIF:12351404
Myelogenous Leukemias, Ph1-Positive
chronic myeloid leukemia in remission
LEUKEMIA PHILA POS[accessedResource: MSH:D015464][accessDate: 04-11-2010]
MSH:D015464
Myeloid leukemia, chronic[accessedResource: ICD9:205.1][accessDate: 04-11-2010]
CML - chronic Myelogenous Leukemia
GeneRIF:15556610
GeneRIF:11861294
GeneRIF:14586403
GeneRIF:15583852
GeneRIF:12144533
GeneRIF:15213099
Leukemias, Ph1-Positive Myeloid[accessedResource: MSH:D015464][accessDate: 04-11-2010]
GeneRIF:15716990
chronic myelogenous leukemia, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:8552][accessDate: 04-11-2010]
GeneRIF:12576428
Myeloid Leukemias, Philadelphia-Positive
Leukemia, Myeloid, Philadelphia-Positive
chronic myeloid leukemia NOS (disorder)[accessedResource: DOID:8552][accessDate: 04-11-2010]
Myeloid Leukemia, Philadelphia Positive[accessedResource: MSH:D015464][accessDate: 04-11-2010]
CML in Remission
GeneRIF:15621754
GeneRIF:12408765
Chronic Myelocytic Leukemia[accessedResource: MSH:D015464][accessDate: 04-11-2010]
chronic myeloid leukemia without mention of remission[accessedResource: DOID:8552][accessDate: 04-11-2010]
GeneRIF:15790787
Leukemias, Chronic Myeloid
GeneRIF:11937267
chronic myeloid leukemia in remission (disorder)
chronic myelogenous leukemia
GeneRIF:12505259
GeneRIF:12740446
Leukemias, Chronic Myelogenous[accessedResource: MSH:D015464][accessDate: 04-11-2010]
GeneRIF:12393722
chronic myeloid leukemia without mention of remission
GeneRIF:15167915
Leukemias, Ph1-Positive Myelogenous[accessedResource: MSH:D015464][accessDate: 04-11-2010]
CML[accessedResource: DOID:8552][accessDate: 04-11-2010]
Ph1-Positive Myeloid Leukemias
CML - chronic Myelogenous Leukemia[accessedResource: DOID:8552][accessDate: 04-11-2010]
Ph1-Positive Myelogenous Leukemia[accessedResource: MSH:D015464][accessDate: 04-11-2010]
Leukemias, Philadelphia-Positive Myeloid[accessedResource: MSH:D015464][accessDate: 04-11-2010]
GeneRIF:12130516
GeneRIF:15481444
chronic myeloid leukaemia
GeneRIF:15388581
Myeloid Leukemias, Chronic[accessedResource: MSH:D015464][accessDate: 04-11-2010]
Granulocytic Leukemia, Chronic
Clonal hematopoetic disorder caused by an acquired genetic defect in PLURIPOTENT STEM CELLS. It starts in MYELOID CELLS of the bone marrow, invades the blood and then other organs. The condition progresses from a stable, more indolent, chronic phase (LEUKEMIA, MYELOID, CHRONIC PHASE) lasting up to 7 years, to an advanced phase composed of an accelerated phase (LEUKEMIA, MYELOID, ACCELERATED PHASE) and BLAST CRISIS.[accessedResource: MSH:D015464][accessDate: 04-11-2010]
GeneRIF:12734675
ICD9:205.1
chronic myeloid leukaemia[accessedResource: DOID:8552][accessDate: 04-11-2010]
GeneRIF:15626746
DOID:8552
GeneRIF:14523459
chronic myeloid leukemia in remission[accessedResource: DOID:8552][accessDate: 04-11-2010]
1.4
GeneRIF:14656881
chronic myeloid leukemia, disease (disorder)
GeneRIF:12576338
Leukemia, Myelogenous, Chronic, BCR-ABL Positive[accessedResource: MSH:D015464][accessDate: 04-11-2010]
GeneRIF:15676212
Leukemia, Ph1-Positive Myeloid
Myelocytic Leukemia, Chronic
chronic myelogenous leukemia, no ICD-O subtype (morphologic abnormality)
GeneRIF:11830496
Leukemia, Ph1-Positive Myeloid[accessedResource: MSH:D015464][accessDate: 04-11-2010]
GeneRIF:15735728
James Malone
Chronic Myelocytic Leukemias[accessedResource: MSH:D015464][accessDate: 04-11-2010]
GeneRIF:15569990
chronic myeloid leukemia in remission (disorder)[accessedResource: DOID:8552][accessDate: 04-11-2010]
chronic myeloid leukemia
CML in Remission[accessedResource: DOID:8552][accessDate: 04-11-2010]
Chronic Granulocytic Leukemias[accessedResource: MSH:D015464][accessDate: 04-11-2010]
Chronic Myelogenous Leukemias
chronic myeloid leukemia, disease (disorder)[accessedResource: DOID:8552][accessDate: 04-11-2010]
CML
Leukemia, Myelogenous, Chronic, BCR-ABL Positive
GeneRIF:12964051
LEUKEMIA PHILA POS
Leukemias, Chronic Myelocytic
Leukemia, Chronic Granulocytic[accessedResource: MSH:D015464][accessDate: 04-11-2010]
chronic myeloid leukemia NOS (disorder)
GeneRIF:16361542
GeneRIF:12821944
Leukemias, Chronic Granulocytic
Clonal hematopoetic disorder caused by an acquired genetic defect in PLURIPOTENT STEM CELLS. It starts in MYELOID CELLS of the bone marrow, invades the blood and then other organs. The condition progresses from a stable, more indolent, chronic phase (LEUKEMIA, MYELOID, CHRONIC PHASE) lasting up to 7 years, to an advanced phase composed of an accelerated phase (LEUKEMIA, MYELOID, ACCELERATED PHASE) and BLAST CRISIS.
Leukemia, Myelogenous, Ph1-Positive
A paired respiratory organ in fishes consisting of gill filaments on the gill arch in the posterior portion of the head and usually providing the primary exchange of gases between the blood and the surrounding water.
branchia
MAT:0000134
XAO:0000120
Compound organ that consists of gill filaments, gill lamellae, gill rakers and pharyngeal arches 3-7. The gills are responsible for primary gas exchange between the blood and the surrounding water.
Compound organ that consists of gill filaments, gill lamellae, gill rakers and pharyngeal arches 3-7. The gills are responsible for primary gas exchange between the blood and the surrounding water.[accessedResource: ZFA:0000354][accessDate: 04-11-2010]
gill
branchia[accessedResource: BTO:0000518][accessDate: 04-11-2010]
James Malone
gills
TAO:0000354
ZFA:0000354
gills[accessedResource: ZFA:0000354][accessDate: 04-11-2010]
external gill[accessedResource: MAT:0000134][accessDate: 04-11-2010]
external gill
BTO:0000518
A paired respiratory organ in fishes consisting of gill filaments on the gill arch in the posterior portion of the head and usually providing the primary exchange of gases between the blood and the surrounding water.[accessedResource: BTO:0000518][accessDate: 04-11-2010]
MFO:0003180
HH
James Malone
Ele Holloway
RGD:61103
WKY
James Malone
InChI=1/C18H19N3O3S/c1-21(16-4-2-3-9-19-16)10-11-24-14-7-5-13(6-8-14)12-15-17(22)20-18(23)25-15/h2-9,15H,10-12H2,1H3,(H,20,22,23)/f/h20H
InChIKey=YASAKCUCGLMORW-UYBDAZJACF
CN(CCOc1ccc(CC2SC(=O)NC2=O)cc1)c1ccccn1
BRL-49653
5-(4-{2-[methyl(pyridin-2-yl)amino]ethoxy}benzyl)-1,3-thiazolidine-2,4-dione
A thiazolidenedione that has formula C18H19N3O3S.
C18H19N3O3S
5-((4-(2-(methyl-2-pyridinylamino)ethoxy)phenyl)methyl)-2,4-thiazolidinedione
http://www.ebi.ac.uk/efo/EFO_0001605
rosiglitazona
James Malone
rosiglitazone
rosiglitazonum
CHEBI:50122
MAT:0000023
appendage
James Malone
CAL62
James Malone
Ele Holloway
CL:0000365
Zygote:1-cell
The stage at which a diploid cell is produced by the fusion of sperm cell nucleus and egg cell.
Zygote:1-cell[accessedResource: ZFS:0000001][accessDate: 04-11-2010]
Diploid cell produced by the fusion of sperm cell nucleus and egg cell.[accessedResource: CL:0000365][accessDate: 04-11-2010]
Tomasz Adamusiak
zygote
ZFS:0000001
Diploid cell produced by the fusion of sperm cell nucleus and egg cell.
James Malone
lateral ventricle
Part of the ventricular system of the brain in each of the cerebral hemispheres. The lateral ventricle in each hemisphere is separated from the other by the septum and each communicates with the THIRD VENTRICLE by the foramen of Monro, In species, particularly those with well developed cortex, the lateral ventrical may be subdivided into anterior, posterior and temporal horns and a body[accessedResource: NIFSTD:birnlex_1263][accessDate: 04-11-2010]
Part of the ventricular system of the brain in each of the cerebral hemispheres. The lateral ventricle in each hemisphere is separated from the other by the septum and each communicates with the THIRD VENTRICLE by the foramen of Monro, In species, particularly those with well developed cortex, the lateral ventrical may be subdivided into anterior, posterior and temporal horns and a body
Ventricles, Lateral[accessedResource: C12834][accessDate: 04-11-2010]
The rostral extensions of the ventricular system of the brain consisting of two cavities, one on each side of the brain within the central regions of each cerebral hemisphere. Cerebrospinal fluid flows from the lateral ventricles into the centrally third ventricle via the foramen of Monroe.
An internal cavity in each cerebral hemisphere that consists of a central body and three cornua including an anterior one curving forward and outward, a posterior one curving backward, and an inferior one curving downward.
An internal cavity in each cerebral hemisphere that consists of a central body and three cornua including an anterior one curving forward and outward, a posterior one curving backward, and an inferior one curving downward.[accessedResource: BTO:0000879][accessDate: 04-11-2010]
Lateral Ventricle of Brain[accessedResource: C12834][accessDate: 04-11-2010]
Lateral Ventricle of Brain
BTO:0000879
The rostral extensions of the ventricular system of the brain consisting of two cavities, one on each side of the brain within the central regions of each cerebral hemisphere. Cerebrospinal fluid flows from the lateral ventricles into the centrally third ventricle via the foramen of Monroe.[accessedResource: C12834][accessDate: 04-11-2010]
C12834
Ventricles, Lateral
Tomasz Adamusiak
NIFSTD:birnlex_1263
gastrocnemius muscle
A large muscle in the back of the lower leg. Its action involves the plantar flexion of the foot.
The largest and most superficial muscle of the calf of the leg arising by two heads from the condyles of the femur and attaching to a tendon that becomes part of the Achilles tendon.
The largest and most superficial muscle of the calf of the leg arising by two heads from the condyles of the femur and attaching to a tendon that becomes part of the Achilles tendon.[accessedResource: BTO:0000506][accessDate: 04-11-2010]
gastrocnemius muscle[accessedResource: BTO:0000506][accessDate: 04-11-2010]
BTO:0000506
NCIt:C32666
A large muscle in the back of the lower leg. Its action involves the plantar flexion of the foot.[accessedResource: NCIt:C32666][accessDate: 04-11-2010]
James Malone
gastrocnemius
posterior cingulate cortex
James Malone
Peripheral Blood
SAEL:8
whole blood
BTO:0000089
A liquid tissue; its major function is to transport oxygen throughout the body. It also supplies the tissues with nutrients, removes waste products, and contains various components of the immune system defending the body against infection. Several hormones also travel in the blood.
MAT:0000083
1: The fluid that circulates in the heart, arteries, capillaries, and veins of a vertebrate animal carrying nourishment and oxygen to and bringing away waste products from all parts of the body.n2: A comparable fluid of an invertebrate.[accessedResource: BTO:0000089][accessDate: 04-11-2010]
blood cells
TAO:0009044
MA:0000059
1: The fluid that circulates in the heart, arteries, capillaries, and veins of a vertebrate animal carrying nourishment and oxygen to and bringing away waste products from all parts of the body.n2: A comparable fluid of an invertebrate.
circulating cells
MO_409
Reticuloendothelial System, Blood[accessedResource: NCIt:C12434][accessDate: 04-11-2010]
Jie Zheng
circulating cell[accessedResource: MAT:0000083][accessDate: 04-11-2010]
A cell which moves among different tissues of the body, via blood, lymph, or other medium.[accessedResource: ZFA:0009043][accessDate: 04-11-2010]
A liquid tissue; its major function is to transport oxygen throughout the body. It also supplies the tissues with nutrients, removes waste products, and contains various components of the immune system defending the body against infection. Several hormones also travel in the blood.[accessedResource: NCIt:C12434][accessDate: 04-11-2010]
blood cell[accessedResource: TAO:0009044][accessDate: 04-11-2010]
James Malone
Reticuloendothelial System, Blood
NCIt:C12434
blood cells[accessedResource: MAT:0000083][accessDate: 04-11-2010]
ZFA:0009043
A cell found predominately in the blood.
blood
blood cell
A cell which moves among different tissues of the body, via blood, lymph, or other medium.
A cell found predominately in the blood.[accessedResource: TAO:0009044][accessDate: 04-11-2010]
Tomasz Adamusiak
circulating cell
circulating cells[accessedResource: ZFA:0009043][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#blood[accessedResource: MO_409][accessDate: 04-11-2010]
CL:0000080
Peripheral Blood[accessedResource: NCIt:C12434][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#blood
true
milligram per milliliter
A milligram per milliliter is a density unit which is equal to mass of an object in milligrams divided by the volume in milliliters.
http://www.ebi.ac.uk/efo/EFO_0001809
A mass unit density which is equal to mass of an object in milligrams divided by the volume in milliliters.
UO:0000176
mg/ml
James Malone
CL:0000514
satellite cell
A precursor cell destined to differentiate into smooth muscle myocytes.
satellite cell[accessedResource: CL:0000514][accessDate: 04-11-2010]
A precursor cell destined to differentiate into smooth muscle myocytes.[accessedResource: CL:0000514][accessDate: 04-11-2010]
smooth muscle myoblast
Tomasz Adamusiak
CC\\C=C/C[C@@H]1[C@H](CCC1=O)CC(O)=O
(1R,2R)-3-oxo-2-(2Z)-2-penten-ylcyclopentanacetic acid
http://www.ebi.ac.uk/efo/EFO_0001560
Jasmonate
jasmonic acid
CHEBI:18292
InChI=1/C12H18O3/c1-2-3-4-5-10-9(8-12(14)15)6-7-11(10)13/h3-4,9-10H,2,5-8H2,1H3,(H,14,15)/b4-3-/t9-,10-/m1/s1/f/h14H
InChIKey=ZNJFBWYDHIGLCU-JXYCJCKWDR
{(1R,2R)-3-oxo-2-[(2Z)-pent-2-en-1-yl]cyclopentyl}acetic acid
(1R,2R)-3-oxo-2-(pent-2Z-enyl)-cyclopentaneacetic acid
2-{(1R,2R)-3-oxo-2-[(Z)-pent-2-enyl]cyclopentyl}acetate
An oxo monocarboxylic acid that has formula C12H18O3.
C12H18O3
GeneRIF:12228786
Atrial fibrillation (disorder)[accessedResource: DOID:11276][accessDate: 04-11-2010]
GeneRIF:15028053
GeneRIF:9722616
GeneRIF:15671429
AF - Atrial fibrillation[accessedResource: SNOMEDCT:49436004][accessDate: 04-11-2010]
GeneRIF:12824162
GeneRIF:15705965
GeneRIF:14651967
GeneRIF:14574075
GeneRIF:15467744
GeneRIF:12554751
James Malone
GeneRIF:12920062
Fibrillations, Atrial[accessedResource: MSH:D001281][accessDate: 04-11-2010]
atrial fibrillation
Auricular Fibrillation[accessedResource: MSH:D001281][accessDate: 04-11-2010]
MSH:D001281
DOID:11276
Abnormal cardiac rhythm that is characterized by rapid, uncoordinated firing of electrical impulses in the upper chambers of the heart (HEART ATRIA). In such case, blood cannot be effectively pumped into the lower chambers of the heart (HEART VENTRICLES). It is caused by abnormal impulse generation.
GeneRIF:15459252
GeneRIF:15289369
GeneRIF:15297374
GeneRIF:14678810
SNOMEDCT:49436004
GeneRIF:11748095
GeneRIF:15610520
Auricular Fibrillations
Abnormal cardiac rhythm that is characterized by rapid, uncoordinated firing of electrical impulses in the upper chambers of the heart (HEART ATRIA). In such case, blood cannot be effectively pumped into the lower chambers of the heart (HEART VENTRICLES). It is caused by abnormal impulse generation.[accessedResource: MSH:D001281][accessDate: 04-11-2010]
GeneRIF:16301177
GeneRIF:11839628
GeneRIF:15249499
GeneRIF:12089346
GeneRIF:16377932
GeneRIF:12205093
Atrial fibrillation (disorder)
Fibrillations, Auricular[accessedResource: MSH:D001281][accessDate: 04-11-2010]
GeneRIF:15023884
GeneRIF:12607777
GeneRIF:12808105
GeneRIF:12093745
Auricular Fibrillation
GeneRIF:15368194
GeneRIF:12522251
AF - Atrial fibrillation
GeneRIF:15922306
GeneRIF:12154005
ICD9:427.31
GeneRIF:14652651
GeneRIF:11956217
Atrial Fibrillations
http://www.ebi.ac.uk/efo/EFO_0001814
A unit of molarity which is equal to 10^[-15] M.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#fM[accessedResource: MO_898][accessDate: 04-11-2010]
Tomasz Adamusiak
true
femtomolar
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#fM
MO_898
fM
James Malone
true
umol/L
micromole per litre
micromole per liter
James Malone
retinas
NIFSTD:birnlex_1153
The portion of the eye developing from the optic primordium and including the neural retina and the retinal pigment layer. Kimmel et al, 1995.
FBbt:00004200
XAO:0000009
The array of photoreceptors & the cells that support them in a compound eye.
EV:0100348
Inner layer of eyeball
The portion of the eye developing from the optic primordium and including the neural retina and the retinal pigment layer. Kimmel et al, 1995.[accessedResource: TAO:0000152][accessDate: 04-11-2010]
James Malone
Multi-tissue structure that contains the retinal neural layer and the retinal pigmented epithelium, and develops from the optic cup.
retina
retina structure
EMAPA:17168
Tomasz Adamusiak
retina[accessedResource: TAO:0000152][accessDate: 04-11-2010]
MFO:0003600
The sensory membrane that lines the eye, is composed of several layers including one containing the rods and cones, and functions as the immediate instrument of vision by receiving the image formed by the lens and converting it into chemical and nervous signals which reach the brain by way of the optic nerve.
Tunica interna of eyeball
retinas[accessedResource: ZFA:0000152][accessDate: 04-11-2010]
MA:0000276
The array of photoreceptors and the cells that support them in a compound eye.
Layer of wall of eyeball which is continuous with optic nerve.
MAT:0000142
FMAID:58301
TAO:0000152
EHDAA:4757
ZFA:0000152
BTO:0001175
The array of photoreceptors and the cells that support them in a compound eye.[accessedResource: FBbt:00004200][accessDate: 04-11-2010]
Multi-tissue structure that contains the retinal neural layer and the retinal pigmented epithelium, and develops from the optic cup.[accessedResource: ZFA:0000152][accessDate: 04-11-2010]
SAEL:91
The sensory membrane that lines the eye, is composed of several layers including one containing the rods and cones, and functions as the immediate instrument of vision by receiving the image formed by the lens and converting it into chemical and nervous signals which reach the brain by way of the optic nerve.[accessedResource: BTO:0001175][accessDate: 04-11-2010]
TADS:0000551
digit
forelimb digit
hindlimb digit
XAO:0003035
forelimb digit[accessedResource: MAT:0000285][accessDate: 04-11-2010]
hindlimb digit[accessedResource: MAT:0000285][accessDate: 04-11-2010]
James Malone
SAEL:29
XAO:0003036
MAT:0000285
An abnormal tissue growth resulted from uncontrolled cell proliferation. Benign neoplastic cells resemble normal cells without exhibiting significant cytologic atypia, while malignant ones exhibit overt signs such as dysplastic features, atypical mitotic figures, necrosis, nuclear pleomorphism, and anaplasia. Representative examples of benign neoplasms include papillomas, cystadenomas, and lipomas; malignant neoplasms include carcinomas, sarcomas, lymphomas, and leukemias.
Neoplasms[accessedResource: NCIt:C3262][accessDate: 04-11-2010]
An abnormal tissue growth resulted from uncontrolled cell proliferation.
neoplasm
Neoplastic Growth
Neoplasia[accessedResource: NCIt:C3262][accessDate: 04-11-2010]
Tumor[accessedResource: NCIt:C3262][accessDate: 04-11-2010]
Neoplasms
A benign or malignant tissue growth resulting from uncontrolled cell proliferation. Benign neoplastic cells resemble normal cells without exhibiting significant cytologic atypia, while malignant cells exhibit overt signs such as dysplastic features, atypical mitotic figures, necrosis, nuclear pleomorphism, and anaplasia. Representative examples of benign neoplasms include papillomas, cystadenomas, and lipomas; malignant neoplasms include carcinomas, sarcomas, lymphomas, and leukemias.[accessedResource: NCIt:C3262][accessDate: 04-11-2010]
NCIt:C3262
James Malone
NEOPLASMS BENIGN, MALIGNANT AND UNSPECIFIED (INCL CYSTS AND POLYPS)[accessedResource: NCIt:C3262][accessDate: 04-11-2010]
Tumor
Neoplastic Growth[accessedResource: NCIt:C3262][accessDate: 04-11-2010]
A benign or malignant tissue growth resulting from uncontrolled cell proliferation. Benign neoplastic cells resemble normal cells without exhibiting significant cytologic atypia, while malignant cells exhibit overt signs such as dysplastic features, atypical mitotic figures, necrosis, nuclear pleomorphism, and anaplasia. Representative examples of benign neoplasms include papillomas, cystadenomas, and lipomas; malignant neoplasms include carcinomas, sarcomas, lymphomas, and leukemias.
Neoplasia
NEOPLASMS BENIGN, MALIGNANT AND UNSPECIFIED (INCL CYSTS AND POLYPS)
A sensory system disease is a disease which has as location the sensory system.
sensory system disease
James Malone
CL:0000371
The cell protoplasm after removal of the cell wall.
The cell protoplasm after removal of the cell wall.[accessedResource: CL:0000371][accessDate: 04-11-2010]
protoplast
Tomasz Adamusiak
GeneRIF:12860835
GeneRIF:15146954
GeneRIF:14701907
GeneRIF:14616762
SNOMEDCT:195537001
GeneRIF:12975385
GeneRIF:14697241
High blood pressure (& [essential hypertension])[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:15864120
GeneRIF:12566942
GeneRIF:12030900
GeneRIF:12443993
[X]Hypertensive diseases (disorder)[accessedResource: SNOMEDCT:195537001][accessDate: 04-11-2010]
GeneRIF:15756929
GeneRIF:11803452
GeneRIF:15076153
GeneRIF:11792466
GeneRIF:11799081
GeneRIF:14633140
GeneRIF:11877320
ICD9:401-405.99
GeneRIF:12642508
DOID:10763
GeneRIF:15452033
GeneRIF:14736842
GeneRIF:14597849
HYPERTENSIVE DISEASE
GeneRIF:12172320
GeneRIF:12482634
GeneRIF:12023681
GeneRIF:11984003
GeneRIF:15048641
SURG COMP - HYPERTENSION
GeneRIF:15579504
GeneRIF:16115038
GeneRIF:16216916
GeneRIF:15596575
GeneRIF:15076188
GeneRIF:11849458
Hypertensive disease (disorder)
GeneRIF:12372003
GeneRIF:12399948
GeneRIF:15117826
GeneRIF:14514639
GeneRIF:15613621
GeneRIF:15950062
GeneRIF:12122115
GeneRIF:12023056
GeneRIF:12569260
GeneRIF:12388212
GeneRIF:15458945
GeneRIF:15121838
GeneRIF:15743788
GeneRIF:12025958
HTN - hypertension[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:15452029
GeneRIF:15797659
GeneRIF:12746411
GeneRIF:15662219
GeneRIF:11821707
GeneRIF:15563533
GeneRIF:15866055
GeneRIF:14622117
GeneRIF:12639805
(hypertensive disease) or (hypertension)
GeneRIF:15640278
GeneRIF:15766329
GeneRIF:14752100
GeneRIF:15055249
GeneRIF:11882596
GeneRIF:14744461
GeneRIF:12878376
GeneRIF:12105146
GeneRIF:15042429
GeneRIF:14718360
GeneRIF:15920074
GeneRIF:15671602
GeneRIF:12536339
GeneRIF:12391843
GeneRIF:14643573
GeneRIF:12397037
GeneRIF:15097232
GeneRIF:15100095
GeneRIF:12730030
GeneRIF:12924622
GeneRIF:11986365
GeneRIF:14551242
GeneRIF:15738350
hyperpiesia
Persistently high systemic arterial BLOOD PRESSURE. Based on multiple readings (BLOOD PRESSURE DETERMINATION), hypertension is currently defined as when SYSTOLIC PRESSURE is consistently greater than 140 mm Hg or when DIASTOLIC PRESSURE is consistently 90 mm Hg or more.
GeneRIF:12782219
hypertensive disease (disorder)[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:15340111
GeneRIF:12511547
[X]Hypertensive diseases[accessedResource: SNOMEDCT:195537001][accessDate: 04-11-2010]
GeneRIF:11840488
GeneRIF:16132104
Persistently high systemic arterial BLOOD PRESSURE. Based on multiple readings (BLOOD PRESSURE DETERMINATION), hypertension is currently defined as when SYSTOLIC PRESSURE is consistently greater than 140 mm Hg or when DIASTOLIC PRESSURE is consistently 90 mm Hg or more.[accessedResource: MSH:D006973][accessDate: 04-11-2010]
GeneRIF:12165748
GeneRIF:12566941
GeneRIF:16091581
GeneRIF:11864924
GeneRIF:14553964
GeneRIF:16166162
hypertension NOS[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:16027245
hyperpiesia[accessedResource: DOID:10763][accessDate: 04-11-2010]
Blood Pressure, High
GeneRIF:15583131
GeneRIF:15935077
GeneRIF:14515335
GeneRIF:12072411
GeneRIF:12476421
GeneRIF:16103266
GeneRIF:15797740
GeneRIF:15993631
GeneRIF:14697676
GeneRIF:12511523
GeneRIF:16230521
GeneRIF:15738346
GeneRIF:15110905
GeneRIF:12771048
GeneRIF:14993194
GeneRIF:14654758
GeneRIF:12484509
GeneRIF:12213905
GeneRIF:12574109
GeneRIF:15480095
Blood Pressures, High[accessedResource: MSH:D006973][accessDate: 04-11-2010]
GeneRIF:12506509
GeneRIF:16115223
GeneRIF:15195688
GeneRIF:15914769
GeneRIF:15956775
GeneRIF:15775784
GeneRIF:15621007
GeneRIF:12117726
GeneRIF:12388782
Hypertensive disease NOS (disorder)[accessedResource: SNOMEDCT:194794002][accessDate: 04-11-2010]
MSH:D006973
GeneRIF:15489962
GeneRIF:15106800
GeneRIF:11924719
GeneRIF:11833851
GeneRIF:12695524
GeneRIF:15890973
GeneRIF:15662218
GeneRIF:12677022
James Malone
hypertensive disease[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:12729892
GeneRIF:15887114
GeneRIF:12884521
GeneRIF:16172428
GeneRIF:12011775
High Blood Pressures
GeneRIF:12460053
GeneRIF:12544440
GeneRIF:12670745
GeneRIF:15037565
GeneRIF:15050533
GeneRIF:15831367
GeneRIF:15141213
GeneRIF:15015152
GeneRIF:16209130
GeneRIF:15471983
GeneRIF:15975728
GeneRIF:11988231
GeneRIF:12484516
GeneRIF:14621190
SNOMEDCT:194794002
GeneRIF:15716853
GeneRIF:12627873
GeneRIF:15554460
SURG COMP - HYPERTENSION[accessedResource: ICD9:997.91][accessDate: 04-11-2010]
GeneRIF:15201549
GeneRIF:15020309
GeneRIF:12484512
GeneRIF:12669427
GeneRIF:15451779
GeneRIF:15146952
GeneRIF:12719438
GeneRIF:14719182
GeneRIF:16221215
GeneRIF:16051894
GeneRIF:15148501
GeneRIF:15194301
GeneRIF:12133472
GeneRIF:12145290
GeneRIF:16286571
GeneRIF:15896881
GeneRIF:15726836
GeneRIF:11952164
GeneRIF:15784171
GeneRIF:16037544
GeneRIF:15253101
GeneRIF:12181435
GeneRIF:15302839
GeneRIF:15886479
GeneRIF:15054141
GeneRIF:12457738
GeneRIF:14969735
GeneRIF:11976386
GeneRIF:12192616
GeneRIF:14506074
High blood pressure (& [essential hypertension])
(hypertensive disease) or (hypertension)[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:12732339
GeneRIF:12359981
GeneRIF:14693679
GeneRIF:12751759
GeneRIF:14967839
GeneRIF:15480094
GeneRIF:15994241
GeneRIF:12013496
GeneRIF:11800057
GeneRIF:12244304
GeneRIF:12452334
GeneRIF:15967869
GeneRIF:15699473
GeneRIF:12844513
GeneRIF:14653307
GeneRIF:12218313
GeneRIF:12297007
GeneRIF:12450315
GeneRIF:15075196
GeneRIF:15492474
GeneRIF:12925562
GeneRIF:16115032
hypertension NOS
GeneRIF:14604995
GeneRIF:12468106
GeneRIF:15340103
GeneRIF:15831363
GeneRIF:15479166
GeneRIF:16203874
GeneRIF:11798846
GeneRIF:15469887
GeneRIF:15659047
hypertensive disease NOS[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:12364355
GeneRIF:15059935
GeneRIF:12566855
GeneRIF:15314687
GeneRIF:16172427
GeneRIF:16280269
GeneRIF:12050272
GeneRIF:15311109
GeneRIF:14506400
GeneRIF:16103269
GeneRIF:14742306
GeneRIF:16130282
GeneRIF:11880335
GeneRIF:15162499
GeneRIF:15809361
GeneRIF:15942458
GeneRIF:14707164
GeneRIF:15363817
GeneRIF:15850776
GeneRIF:12390711
hypertension
GeneRIF:16144986
GeneRIF:15304560
GeneRIF:16243970
GeneRIF:14499437
GeneRIF:12529502
GeneRIF:15598876
GeneRIF:12372791
GeneRIF:15773229
High Blood Pressure[accessedResource: MSH:D006973][accessDate: 04-11-2010]
GeneRIF:15554451
[X]Hypertensive diseases
GeneRIF:12021582
GeneRIF:15758045
GeneRIF:12775885
GeneRIF:12480131
GeneRIF:12646192
GeneRIF:15126519
GeneRIF:15055253
GeneRIF:15244100
GeneRIF:15123570
GeneRIF:14688210
GeneRIF:14744925
GeneRIF:12911547
GeneRIF:15545843
GeneRIF:15638826
GeneRIF:12644270
GeneRIF:15944206
GeneRIF:15746214
GeneRIF:12518270
GeneRIF:15905889
GeneRIF:12968128
vascular hypertensive disorder[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:14608379
GeneRIF:15678704
GeneRIF:15198480
GeneRIF:13679998
GeneRIF:15131114
GeneRIF:12754175
GeneRIF:14698468
GeneRIF:12950120
GeneRIF:14573316
GeneRIF:12215468
GeneRIF:14618677
GeneRIF:16097364
GeneRIF:15292344
ICD9:997.91
GeneRIF:14699441
hypertensive disease NOS
GeneRIF:15728438
GeneRIF:15824199
GeneRIF:15831362
GeneRIF:12452325
GeneRIF:12817181
GeneRIF:12215464
GeneRIF:15643128
GeneRIF:11903302
GeneRIF:12865163
GeneRIF:15726642
GeneRIF:12215473
GeneRIF:16280279
GeneRIF:14568996
GeneRIF:15076154
GeneRIF:15996002
HTN
GeneRIF:11872379
GeneRIF:14499940
GeneRIF:11910303
GeneRIF:12429873
GeneRIF:12742250
GeneRIF:12515852
GeneRIF:15498966
GeneRIF:15824463
GeneRIF:12706259
GeneRIF:15699451
GeneRIF:15753233
GeneRIF:11882615
Hypertensive disease NOS (disorder)
GeneRIF:12419325
GeneRIF:14621188
HTN[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:12670743
GeneRIF:12867255
GeneRIF:11882590
[X]Hypertensive diseases (disorder)
GeneRIF:15927846
GeneRIF:12446729
GeneRIF:15076189
GeneRIF:14988405
GeneRIF:16003175
GeneRIF:15190056
GeneRIF:15193619
GeneRIF:12872043
GeneRIF:15316241
HTN - hypertension
vascular hypertensive disorder
GeneRIF:15837834
GeneRIF:15737640
GeneRIF:14620922
GeneRIF:16377929
GeneRIF:15146950
GeneRIF:14970360
GeneRIF:12217425
GeneRIF:15611369
GeneRIF:12648304
GeneRIF:15059929
GeneRIF:12429553
GeneRIF:15233982
GeneRIF:15809299
GeneRIF:15894833
GeneRIF:15809359
GeneRIF:11956157
GeneRIF:11692154
GeneRIF:15136501
GeneRIF:15475025
GeneRIF:14744462
GeneRIF:12891286
GeneRIF:12540629
GeneRIF:16012192
GeneRIF:15908963
GeneRIF:15928032
GeneRIF:14515341
GeneRIF:12032592
GeneRIF:12130711
GeneRIF:15966738
GeneRIF:15078565
GeneRIF:15097233
GeneRIF:15201550
GeneRIF:14871557
GeneRIF:11926353
GeneRIF:15952872
GeneRIF:15498972
GeneRIF:14966368
GeneRIF:16144989
GeneRIF:15480097
vitaminas
vitamin
CHEBI:33229
James Malone
vitamines
vitamine
vitamina
vitaminum
http://www.ebi.ac.uk/efo/EFO_0001831
An organic substance that is distributed in foodstuffs, is distinct from the main organic components of food (protein, carbohydrate and fat) and is needed for the normal nutrition of the organism in question. The term "vitamines" (from vita + amines) was coined in 1912 by Casimir Funk, who believed that these compounds were amines.
vitamins
NCIt:C12803
A porelike structure surrounding the entire circumference of the anterior chamber through which aqueous humor circulates to the canal of Schlemm. (MeSH)
A porelike structure surrounding the entire circumference of the anterior chamber through which aqueous humor circulates to the canal of Schlemm. (MeSH)[accessedResource: NCIt:C12803][accessDate: 04-11-2010]
trabecular meshwork
Tomasz Adamusiak
stem cell derived cell line
SCH
James Malone
Ele Holloway
HaCaT
James Malone
Ele Holloway
CSF[accessedResource: NCIt:C12692][accessDate: 04-11-2010]
The serumlike fluid that circulates through the ventricles of the brain, the cavity of the spinal cord, and the subarachnoid space, functioning in shock absorption.[accessedResource: BTO:0000237][accessDate: 04-11-2010]
The fluid that is contained within the brain ventricles, the subarachnoid space and the central canal of the spinal cord.[accessedResource: NCIt:C12692][accessDate: 04-11-2010]
cerebrospinal fluid
spinal fluid
Cerebral Spinal Fluid
The serumlike fluid that circulates through the ventricles of the brain, the cavity of the spinal cord, and the subarachnoid space, functioning in shock absorption.
CSF
The fluid that is contained within the brain ventricles, the subarachnoid space and the central canal of the spinal cord.
Cerebral Spinal Fluid[accessedResource: NCIt:C12692][accessDate: 04-11-2010]
NCIt:C12692
BTO:0000237
James Malone
spinal fluid[accessedResource: BTO:0000237][accessDate: 04-11-2010]
CHEBI:16412
lipopolysaccharides
LPS
http://www.ebi.ac.uk/efo/EFO_0001564
Natural compounds consisting of a trisaccharide repeating unit (two heptose units and octulosonic acid) with oligosaccharide side chains and 3-hydroxytetradecanoic acid units (they are a major constituent of the cell walls of Gram-negative bacteria).
lipopolysaccharide
http://jaxmice.jax.org/strain/009290.html
ILSXISS107/TejJ
Tomasz Adamusiak
MO_689
Tomasz Adamusiak
Jie Zheng
true
A femtomole is a substance unit equal to 10^-15 mol.
James Malone
http://www.ebi.ac.uk/efo/EFO_0001797
A substance unit equal to 10^[-15] mol.
fmol
femtomole
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#fmol[accessedResource: MO_689][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#fmol
NIH3T3
James Malone
GeneRIF:12032588
Leyden-Mbius muscular dystrophy
limb-girdle muscular dystrophies
Erb's muscular dystrophy
A heterogenous group of inherited muscular dystrophy that can be autosomal dominant or autosomal recessive. There are many forms (called LGMDs) involving genes encoding muscle membrane proteins such as the sarcoglycan (SARCOGLYCANS) complex that interacts with DYSTROPHIN. The disease is characterized by progressing wasting and weakness of the proximal muscles of arms and legs around the HIPS and SHOULDERS (the pelvic and shoulder girdles).
GeneRIF:16344347
GeneRIF:15087111
Limb-girdle muscular dystrophy (disorder)
SNOMEDCT:93153005
Leyden-Mobius muscular dystrophy[accessedResource: SNOMEDCT:93153005][accessDate: 04-11-2010]
GeneRIF:11891182
A heterogenous group of inherited muscular dystrophy that can be autosomal dominant or autosomal recessive. There are many forms (called LGMDs) involving genes encoding muscle membrane proteins such as the sarcoglycan (SARCOGLYCANS) complex that interacts with DYSTROPHIN. The disease is characterized by progressing wasting and weakness of the proximal muscles of arms and legs around the HIPS and SHOULDERS (the pelvic and shoulder girdles).[accessedResource: MSH:D049288][accessDate: 04-11-2010]
GeneRIF:14981167
limb-girdle muscular dystrophy
calpainopathy
GeneRIF:11822024
James Malone
Limb-girdle muscular dystrophy (disorder)[accessedResource: SNOMEDCT:93153005][accessDate: 04-11-2010]
Leyden-Möbius muscular dystrophy[accessedResource: SNOMEDCT:93153005][accessDate: 04-11-2010]
Limb Girdle Muscular Dystrophies[accessedResource: MSH:D049288][accessDate: 04-11-2010]
GeneRIF:15351423
GeneRIF:12499399
Leyden-Mbius muscular dystrophy[accessedResource: DOID:11724][accessDate: 04-11-2010]
DOID:11724
GeneRIF:12428213
GeneRIF:11741828
GeneRIF:14600260
Leyden-Mobius muscular dystrophy
MSH:D049288
GeneRIF:15385448
Leyden-Möbius muscular dystrophy
CL:0000333
A cell of the strip of specialized ectoderm flanking each side of the embryonal neural plate, which after the closure of the neural tube, forms a column of isolated cells along the dorsal aspect of the neural tube. Most of the cranial and all of the spinal sensory ganglion cells arise by differentiation of neural crest cells.
A cell of the strip of specialized ectoderm flanking each side of the embryonal neural plate, which after the closure of the neural tube, forms a column of isolated cells along the dorsal aspect of the neural tube. Most of the cranial and all of the spinal sensory ganglion cells arise by differentiation of neural crest cells.[accessedResource: CL:0000333][accessDate: 04-11-2010]
neural crest cell
James Malone
NCI-H1666
James Malone
Ele Holloway
NCIt:C12806
The fifth set of paired nerves of the face that emerge from the brain steam. These nerves have sensory and motor functions in the face, oral cavity, and nasal cavity.[accessedResource: NCIt:C12806][accessDate: 04-11-2010]
Fifth Cranial Nerve[accessedResource: NCIt:C12806][accessDate: 04-11-2010]
Either of the fifth pair of cranial nerves, having sensory and motor functions in the face, teeth, mouth, and nasal cavity.[accessedResource: BTO:0001072][accessDate: 04-11-2010]
Nervus Trigeminus
Fifth Cranial Nerve
trigeminus[accessedResource: BTO:0001072][accessDate: 04-11-2010]
trigeminal nerve
Nervus Trigeminus[accessedResource: NCIt:C12806][accessDate: 04-11-2010]
James Malone
The fifth set of paired nerves of the face that emerge from the brain steam. These nerves have sensory and motor functions in the face, oral cavity, and nasal cavity.
trigeminus
Cranial Nerve V[accessedResource: NCIt:C12806][accessDate: 04-11-2010]
Either of the fifth pair of cranial nerves, having sensory and motor functions in the face, teeth, mouth, and nasal cavity.
BTO:0001072
Cranial Nerve V
mesoderm cell
mesoderm cell[accessedResource: CL:0000222][accessDate: 04-11-2010]
mesoblast
mesoblast[accessedResource: CL:0000222][accessDate: 04-11-2010]
mesodermal cell
A cell of the middle germ layer of the embryo.[accessedResource: CL:0000222][accessDate: 04-11-2010]
CL:0000222
James Malone
A cell of the middle germ layer of the embryo.
OV90
James Malone
Ele Holloway
A triazole that has formula C15H18ClN3O.
(E)-(+-)-beta-((4-chlorophenyl)methylene)-alpha-(1,1-dimethylethyl)-1H-1,2,4-triazole-1-ethanol
uniconazole
C15H18ClN3O
InChI=1/C15H18ClN3O/c1-15(2,3)14(20)13(19-10-17-9-18-19)8-11-4-6-12(16)7-5-11/h4-10,14,20H,1-3H3/b13-8+
(1E)-1-(4-chlorophenyl)-4,4-dimethyl-2-(1H-1,2,4-triazol-1-yl)pent-1-en-3-ol
InChIKey=YNWVFADWVLCOPU-MDWZMJQEBY
A secondary alcohol that has formula C15H18ClN3O.
uniconazole-P
CHEBI:38000
http://www.ebi.ac.uk/efo/EFO_0001633
CC(C)(C)C(O)C(\\n1cncn1)=C/c1ccc(Cl)cc1
Encephalitis/myelitis NOS (disorder)
Encephalitis/myelitis NOS (disorder)[accessedResource: DOID:640][accessDate: 04-11-2010]
Encephalitis &/or myelitis[accessedResource: DOID:640][accessDate: 04-11-2010]
DOID:640
encephalomyelitis
MYELOENCEPH[accessedResource: MSH:D004679][accessDate: 04-11-2010]
Encephalomyelitis, NOS[accessedResource: SNOMEDCT:62950007][accessDate: 04-11-2010]
GeneRIF:15310853
Encephalitis &/or myelitis
Myeloencephalitides[accessedResource: MSH:D004679][accessDate: 04-11-2010]
MSH:D004679
Encephalomyelitis NOS
Encephalomyelitis (disorder)
Encephalitis/myelitis NOS
NCIt:C34580
SNOMEDCT:62950007
Myeloencephalitis
GeneRIF:12496452
A general term indicating inflammation of the BRAIN and SPINAL CORD, often used to indicate an infectious process, but also applicable to a variety of autoimmune and toxic-metabolic conditions. There is significant overlap regarding the usage of this term and ENCEPHALITIS in the literature.[accessedResource: MSH:D004679][accessDate: 04-11-2010]
SNOMEDCT:230196000
ENCEPH INFLAMM
MYELOENCEPH
Inflammatory Encephalomyelitis
Encephalomyelitis (disorder)[accessedResource: DOID:640][accessDate: 04-11-2010]
Inflammatory Encephalomyelitis[accessedResource: MSH:D004679][accessDate: 04-11-2010]
ENCEPH INFLAMM[accessedResource: MSH:D004679][accessDate: 04-11-2010]
Encephalomyelitis NOS (disorder)
Encephalitis/myelitis NOS[accessedResource: DOID:640][accessDate: 04-11-2010]
Myeloencephalitis[accessedResource: MSH:D004679][accessDate: 04-11-2010]
A general term indicating inflammation of the BRAIN and SPINAL CORD, often used to indicate an infectious process, but also applicable to a variety of autoimmune and toxic-metabolic conditions. There is significant overlap regarding the usage of this term and ENCEPHALITIS in the literature.
Myeloencephalitides
James Malone
Encephalomyelitis NOS (disorder)[accessedResource: DOID:640][accessDate: 04-11-2010]
GeneRIF:15221958
GeneRIF:12452048
DOID:3905
Lung Cancer
GeneRIF:15086519
A carcinoma originating in the lung. Lung carcinomas usually arise from the epithelium that lines the bronchial tree (bronchogenic carcinomas), and are classified as small cell or non-small cell carcinomas. Non-small cell lung carcinomas are usually adenocarcinomas, squamous cell carcinomas, or large cell carcinomas. Metastatic carcinomas to the lung are also common, and can be difficult to distinguish from primary tumors.
GeneRIF:12581892
GeneRIF:15754326
lung carcinoma
GeneRIF:11807786
GeneRIF:15041706
NCIt:C4878
Lung Cancer[accessedResource: NCIt:C4878][accessDate: 04-11-2010]
Cancer of the Lung[accessedResource: NCIt:C4878][accessDate: 04-11-2010]
GeneRIF:11920544
Cancer of Lung
Cancer of the Lung
GeneRIF:16038795
Carcinoma of Lung[accessedResource: NCIt:C4878][accessDate: 04-11-2010]
GeneRIF:12819188
A carcinoma that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis.[accessedResource: DOID:3905][accessDate: 04-11-2010]
A carcinoma that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis.
GeneRIF:12115568
GeneRIF:12162425
GeneRIF:16052521
A carcinoma originating in the lung. Lung carcinomas usually arise from the epithelium that lines the bronchial tree (bronchogenic carcinomas), and are classified as small cell or non-small cell carcinomas. Non-small cell lung carcinomas are usually adenocarcinomas, squamous cell carcinomas, or large cell carcinomas. Metastatic carcinomas to the lung are also common, and can be difficult to distinguish from primary tumors.[accessedResource: NCIt:C4878][accessDate: 04-11-2010]
GeneRIF:15756594
GeneRIF:11844598
GeneRIF:15242764
GeneRIF:12067477
GeneRIF:15456784
GeneRIF:11939413
Carcinoma of the Lung
carcinoma OF LUNG
GeneRIF:16125822
Carcinoma of the Lung[accessedResource: NCIt:C4878][accessDate: 04-11-2010]
GeneRIF:11857309
James Malone
cancer of lung[accessedResource: DOID:3905][accessDate: 04-11-2010]
GeneRIF:15782117
GeneRIF:12021930
Precursor Lymphoblastic Leukemia/Lymphoma
Precursor Lymphoid Neoplasm[accessedResource: NCIt:C7055][accessDate: 10-05-2010]
true
Precursor Lymphoblastic Leukemia/Lymphoma[accessedResource: NCIt:C7055][accessDate: 10-05-2010]
A neoplasm of immature malignant lymphocytes (lymphoblasts) committed to the B-cell or T-cell lineage. Neoplasms involving the bone marrow and the peripheral blood are called precursor lymphoblastic leukemias or acute lymphoblastic leukemias. Neoplasms involving primarily lymph nodes or extranodal sites are called lymphoblastic lymphomas. -- 2003[accessedResource: NCIt:C7055][accessDate: 10-05-2010]
DOID:5600
ALL
obsolete_acute lymphoblastic leukemia
Precursor Lymphoid Neoplasm
A neoplasm of immature malignant lymphocytes (lymphoblasts) committed to the B-cell or T-cell lineage. Neoplasms involving the bone marrow and the peripheral blood are called precursor lymphoblastic leukemias or acute lymphoblastic leukemias. Neoplasms involving primarily lymph nodes or extranodal sites are called lymphoblastic lymphomas. -- 2003
1.5
James Malone
NCIt:C7055
Duplicate with acute lymphocytic leukemia (EFO_0000220)
NCIt:C12246
pars laryngea pharyngis
pars laryngea pharyngis[accessedResource: BTO:0001740][accessDate: 04-11-2010]
The portion of the pharynx that lies below the upper edge of the epiglottis and opens into the larynx and esophagus.
Hypopharynx[accessedResource: NCIt:C12246][accessDate: 04-11-2010]
laryngopharynx
The portion of the pharynx that lies below the upper edge of the epiglottis and opens into the larynx and esophagus.[accessedResource: BTO:0001740][accessDate: 04-11-2010]
hypopharynx
James Malone
The lower part of the pharynx that connects to the esophagus.
The lower part of the pharynx that connects to the esophagus.[accessedResource: NCIt:C12246][accessDate: 04-11-2010]
BTO:0001740
HEK-293H
James Malone
metastatic prostate cancer
James Malone
upper limb
Superior member
A limb (as an arm, wing, fin, or leg) that is situated anteriorly.
EV:0100014
EHDAA:6208
James Malone
forelimb
Upper extremity
Upper extremity[accessedResource: FMAID:7183][accessDate: 04-11-2010]
Upper limb[accessedResource: FMAID:7183][accessDate: 04-11-2010]
SAEL:42
FMAID:7183
MAT:0000394
XAO:0003030
BTO:0001729
A limb (as an arm, wing, fin, or leg) that is situated anteriorly.[accessedResource: BTO:0001729][accessDate: 04-11-2010]
Superior member[accessedResource: FMAID:7183][accessDate: 04-11-2010]
EMAPA:17412
MA:0000025
NYHA class II
mild heart failure
Tomasz Adamusiak
endometrioid carcinoma
endometrioid carcinoma (morphologic abnormality)[accessedResource: DOID:3000][accessDate: 04-11-2010]
GeneRIF:15781627
DOID:3000
Endometrioid cystadenocarcinoma[accessedResource: SNOMEDCT:30289006][accessDate: 04-11-2010]
Endometrioid Carcinoma of the Female Reproductive System
Endometrioid Carcinomas
Endometrioid Adenocarcinomas[accessedResource: MSH:D018269][accessDate: 04-11-2010]
Endometrioid Carcinoma of Female Reproductive System[accessedResource: NCIt:C3769][accessDate: 04-11-2010]
An adenocarcinoma characterized by the presence of malignant glandular epithelial cells resembling endometrial cells. It can arise from the uterine body, ovary, fallopian tube, cervix, vagina, and uterine ligament.
GeneRIF:14599866
Carcinomas, Endometrioid[accessedResource: MSH:D018269][accessDate: 04-11-2010]
An adenocarcinoma characterized by the presence of malignant glandular epithelial cells resembling endometrial cells. It can arise from the uterine body, ovary, fallopian tube, cervix, vagina, and uterine ligament.[accessedResource: NCIt:C3769][accessDate: 04-11-2010]
MSH:D018269
Female Reproductive Endometrioid Carcinoma
SNOMEDCT:30289006
GeneRIF:14559803
endometrioid carcinoma of female Reproductive system
Endometrioid adenocarcinoma
Endometrioid cystadenocarcinoma
An adenocarcinoma characterized by the presence of cells resembling the glandular cells of the ENDOMETRIUM. It is a common histological type of ovarian CARCINOMA and ENDOMETRIAL CARCINOMA. There is a high frequency of co-occurrence of this form of adenocarcinoma in both tissues.[accessedResource: MSH:D018269][accessDate: 04-11-2010]
James Malone
Endometrioid Carcinoma of the Female Reproductive System[accessedResource: NCIt:C3769][accessDate: 04-11-2010]
NCIt:C3769
An adenocarcinoma characterized by the presence of cells resembling the glandular cells of the ENDOMETRIUM. It is a common histological type of ovarian CARCINOMA and ENDOMETRIAL CARCINOMA. There is a high frequency of co-occurrence of this form of adenocarcinoma in both tissues.
Adenocarcinomas, Endometrioid
Female Reproductive Endometrioid Carcinoma[accessedResource: NCIt:C3769][accessDate: 04-11-2010]
Endometrioid carcinoma (morphologic abnormality)
GeneRIF:11957146
Adenocarcinoma, Endometrioid[accessedResource: MSH:D018269][accessDate: 04-11-2010]
GeneRIF:14559989
GeneRIF:11748987
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311936
CS57515 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311936
CS57515
James Malone
U2-OS
U2OS
James Malone
Ele Holloway
CHEBI:2038
C8H12N4O5
A N-glycosyl-1,3,5-triazine that has formula C8H12N4O5.
InChI=1/C8H12N4O5/c9-7-10-2-12(8(16)11-7)6-5(15)4(14)3(1-13)17-6/h2-6,13-15H,1H2,(H2,9,11,16)/t3-,4-,5-,6-/m1/s1/f/h9H2
http://www.ebi.ac.uk/efo/EFO_0002667
4-Amino-1-beta-D-ribofuranosyl-s-triazin-2(1H)-one
Azacitidine
Nc1ncn([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)n1
4-amino-1-beta-D-ribofuranosyl-1,3,5-triazin-2(1H)-one
InChIKey=NMUSYJAQQFHJEW-QUSQBIOGDY
5-azacytidine
An autosomal dominant degenerative muscle disease characterized by slowly progressive weakness of the muscles of the face, upper-arm, and shoulder girdle. The onset of symptoms usually occurs in the first or second decade of life. Affected individuals usually present with impairment of upper extremity elevation. This tends to be followed by facial weakness, primarily involving the orbicularis oris and orbicularis oculi muscles. (Neuromuscul Disord 1997;7(1):55-62; Adams et al., Principles of Neurology, 6th ed, p1420)[accessedResource: MSH:D020391][accessDate: 04-11-2010]
facioscapulohumeral muscular dystrophy
FSH - Facioscapulohumeral muscular dystrophy
Landouzy-Déjérine muscular dystrophy
Landouzy Dejerine muscular dystrophy
Facioscapulohumeral Type Progressive Muscular Dystrophy
Facioscapulohumeral muscular dystrophy (disorder)
GeneRIF:12874395
Progressive Muscular Dystrophy, Facioscapulohumeral Type[accessedResource: MSH:D020391][accessDate: 04-11-2010]
SNOMEDCT:399091004
DOID:11727
FMD - Facioscapulohumeral muscular dystrophy[accessedResource: SNOMEDCT:399091004][accessDate: 04-11-2010]
Landouzy-Dejerine Dystrophies[accessedResource: MSH:D020391][accessDate: 04-11-2010]
GeneRIF:15520407
James Malone
Landouzy Dejerine Dystrophy[accessedResource: MSH:D020391][accessDate: 04-11-2010]
Dystrophies, Landouzy-Dejerine
FSHD - Facioscapulohumeral muscular dystrophy
Fascioscapulohumeral muscular dystrophy[accessedResource: SNOMEDCT:399091004][accessDate: 04-11-2010]
Facioscapulohumeral Atrophy
MSH:D020391
Landouzy Dejerine Dystrophy
FSHD - Facioscapulohumeral muscular dystrophy[accessedResource: SNOMEDCT:399091004][accessDate: 04-11-2010]
Landouzy-Déjérine muscular dystrophy[accessedResource: SNOMEDCT:399091004][accessDate: 04-11-2010]
FSH - Facioscapulohumeral muscular dystrophy[accessedResource: SNOMEDCT:399091004][accessDate: 04-11-2010]
Muscular Dystrophies, Facioscapulohumeral
Facioscapulohumeral muscular dystrophy (disorder)[accessedResource: SNOMEDCT:399091004][accessDate: 04-11-2010]
Muscular Dystrophies, Facioscapulohumeral[accessedResource: MSH:D020391][accessDate: 04-11-2010]
Fascioscapulohumeral muscular dystrophy
GeneRIF:15551024
An autosomal dominant degenerative muscle disease characterized by slowly progressive weakness of the muscles of the face, upper-arm, and shoulder girdle. The onset of symptoms usually occurs in the first or second decade of life. Affected individuals usually present with impairment of upper extremity elevation. This tends to be followed by facial weakness, primarily involving the orbicularis oris and orbicularis oculi muscles. (Neuromuscul Disord 1997;7(1):55-62; Adams et al., Principles of Neurology, 6th ed, p1420)
Muscular dystrophy, Landouzy-Dejerine[accessedResource: DOID:11727][accessDate: 04-11-2010]
FMD - Facioscapulohumeral muscular dystrophy
Atrophies, Facioscapulohumeral[accessedResource: MSH:D020391][accessDate: 04-11-2010]
Atrophies, Facioscapulohumeral
Atrophy, Facioscapulohumeral[accessedResource: MSH:D020391][accessDate: 04-11-2010]
ZFS:0000018
gastrula germ-ring
James Malone
hippocampus[accessedResource: MAT:0000114][accessDate: 04-11-2010]
A serrated strip of gray matter under the medial border of the hippocampus and in its depths; it is an archaeocortex which develops along the edge of the hippocampal fissure and which consists of molecular, granular, and polymorphic layers.[accessedResource: BTO:0002496][accessDate: 04-11-2010]
gyrus dentatus
MAT:0000114
fascia dentata[accessedResource: NIFSTD:birnlex_1178][accessDate: 04-11-2010]
NIFSTD:birnlex_1178
A serrated strip of gray matter under the medial border of the hippocampus and in its depths; it is an archaeocortex which develops along the edge of the hippocampal fissure and which consists of molecular, granular, and polymorphic layers.
Tomasz Adamusiak
hippocampus
dentate gyrus
fascia dentata
MA:0000191
EMAPA:19148
SAEL:51
BTO:0002496
gyrus dentatus[accessedResource: BTO:0002496][accessDate: 04-11-2010]
James Malone
EV:0100180
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons.
neuroglial cell[accessedResource: BTO:0000524][accessDate: 04-11-2010]
MERGED DEFINITION:nTARGET DEFINITION: The delicate network of branched cells and fibers that supports the tissue of the central nervous system.n--------------------nSOURCE DEFINITION: The cells of the supportive tissue of the central nervous system (neuroglia). These non-neural cells are of three kinds: astrocytes, oligodendrocytes (collectively termed macroglia) and microglia.
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons. (Reichenbach and Wolburg)
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons. (Reichenbach and Wolburg)[accessedResource: NIFSTD:sao313023570][accessDate: 04-11-2010]
neuroglia cell
BTO:0000524
neuroglia
neuroglia cell[accessedResource: BTO:0000524][accessDate: 04-11-2010]
NIFSTD:sao313023570
MERGED DEFINITION:nTARGET DEFINITION: The delicate network of branched cells and fibers that supports the tissue of the central nervous system.n--------------------nSOURCE DEFINITION: The cells of the supportive tissue of the central nervous system (neuroglia). These non-neural cells are of three kinds: astrocytes, oligodendrocytes (collectively termed macroglia) and microglia.[accessedResource: BTO:0000524][accessDate: 04-11-2010]
glia
Tomasz Adamusiak
neuroglia[accessedResource: CL:0000125][accessDate: 04-11-2010]
glial cell
mixed glial cells
neuroglial cell
James Malone
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons.[accessedResource: CL:0000125][accessDate: 04-11-2010]
CL:0000125
glia[accessedResource: NIFSTD:sao313023570][accessDate: 04-11-2010]
1.5
true
obsolete_brain tumor glioblastoma
James Malone
duplication with glioblastoma (EFO_0000519)
A malignant mesenchymal tumor arising from cartilage-forming tissues involving the bones. It affects middle-aged to elderly adults, and the pelvic bones, ribs, shoulder girdle, and long bones are the most common sites of involvement. Most chondrosarcomas arise de novo, but some may develop in a preexisting benign cartilaginous lesion.[accessedResource: NCIt:C2946][accessDate: 04-11-2010]
GeneRIF:14587027
[M]Chondrosarcoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189886003][accessDate: 04-11-2010]
Chondrosarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:14990007][accessDate: 04-11-2010]
Chondrosarcoma, no ICD-O subtype
SNOMEDCT:14990007
Chondrosarcoma morphology
GeneRIF:12736724
James Malone
GeneRIF:15694358
GeneRIF:15534109
chondrosarcoma of bone
Fibrochondrosarcoma[accessedResource: SNOMEDCT:14990007][accessDate: 04-11-2010]
Chondrosarcoma, NOS
chondrosarcoma
Chondrosarcoma, no ICD-O subtype[accessedResource: SNOMEDCT:14990007][accessDate: 04-11-2010]
GeneRIF:16288985
Chondrosarcomas
GeneRIF:15796962
NCIt:C2946
[M]Chondrosarcoma NOS (morphologic abnormality)
GeneRIF:15316669
chondrosarcoma (morphologic abnormality)
GeneRIF:12021923
A slowly growing malignant neoplasm derived from cartilage cells, occurring most frequently in pelvic bones or near the ends of long bones, in middle-aged and old people. Most chondrosarcomas arise de novo, but some may develop in a preexisting benign cartilaginous lesion or in patients with ENCHONDROMATOSIS. (Stedman, 25th ed)
Chondrosarcoma morphology[accessedResource: SNOMEDCT:14990007][accessDate: 04-11-2010]
[M]Chondrosarcoma NOS
GeneRIF:15499569
GeneRIF:11776394
chondrosarcoma of bone[accessedResource: DOID:3371][accessDate: 04-11-2010]
Chondrosarcoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:14990007][accessDate: 04-11-2010]
Fibrochondrosarcoma
GeneRIF:12618336
DOID:3371
Chondrosarcoma, NOS[accessedResource: SNOMEDCT:14990007][accessDate: 04-11-2010]
chondrosarcoma NOS (morphologic abnormality)[accessedResource: DOID:3371][accessDate: 04-11-2010]
chondrosarcoma NOS (morphologic abnormality)
MSH:D002813
A slowly growing malignant neoplasm derived from cartilage cells, occurring most frequently in pelvic bones or near the ends of long bones, in middle-aged and old people. Most chondrosarcomas arise de novo, but some may develop in a preexisting benign cartilaginous lesion or in patients with ENCHONDROMATOSIS. (Stedman, 25th ed)[accessedResource: MSH:D002813][accessDate: 04-11-2010]
A malignant mesenchymal tumor arising from cartilage-forming tissues involving the bones. It affects middle-aged to elderly adults, and the pelvic bones, ribs, shoulder girdle, and long bones are the most common sites of involvement. Most chondrosarcomas arise de novo, but some may develop in a preexisting benign cartilaginous lesion.
GeneRIF:15475194
GeneRIF:15226640
[M]Chondrosarcoma NOS[accessedResource: SNOMEDCT:189886003][accessDate: 04-11-2010]
Chondrosarcomas[accessedResource: MSH:D002813][accessDate: 04-11-2010]
GeneRIF:16157221
SNOMEDCT:189886003
Chondrosarcoma, no ICD-O subtype (morphologic abnormality)
A temporal measure of the length of time that a patient will remain alive without the disease getting worse.
distant metastasis free survival
James Malone
NCIt:C43391
Denotes the inhabitants of China, a person from there, or their descendants elsewhere.
Denotes the inhabitants of China, a person from there, or their descendants elsewhere.[accessedResource: NCIt:C43391][accessDate: 04-11-2010]
Chinese
Tomasz Adamusiak
MAT:0000486
distal end of femur
Distal is a geometric modifier describing the point furthest from the point of attachment to the body or to some point of origin. For example, distal end of femur.
distal
James Malone
KHOS240S
James Malone
Ele Holloway
James Malone
MO_983
A vortexer is an instrument that mixes small vials of liquid by creating a rotation of the liquid around its own center. It consists of an electric motor with the drive shaft oriented vertically and attached to a cupped rubber piece mounted slightly off-center. As the motor runs the rubber piece oscillates rapidly in a circular motion. When a test tube or other appropriate container is pressed into the rubber cup (or touched to its edge) the motion is transmitted to the liquid inside and a vortex is created.
vortexer
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0002027
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#vortexer
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#vortexer[accessedResource: MO_983][accessDate: 04-11-2010]
vortex_mixer
Jie Zheng
FBbt:00005489
dorsal trunk specific anlage
James Malone
James Malone
OBI_0000070
measuring
A hybridization on a microarray.
scientific observation
An assay is a process with the objective to create as an output information about a material entity (bearing evaluant role).
assay
A planned process with the objective to produce information about some evaluant
http://www.ebi.ac.uk/efo/EFO_0001455
A planned process with the objective to produce information about some evaluant
http://www.arabidopsis.org/servlets/TairObject?id=1005158648&type=germplasm
CS57624 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158648&type=germplasm
CS57624
James Malone
NCIt:C82393
The stage in life when sex glands become functional. It is characterized by the development of secondary sex characteristics, reproductive functions, and growth spurts.
The stage in life when sex glands become functional. It is characterized by the development of secondary sex characteristics, reproductive functions, and growth spurts.[accessedResource: NCIt:C82393][accessDate: 04-11-2010]
puberty
Tomasz Adamusiak
James Malone
HL60 cell
HL-60
Human acute myeloid leukemia established from the peripheral blood of a 35-year-old woman with acute myeloid leukemia (AML FAB M2) in 1976.[accessedResource: BTO:0000738][accessDate: 04-11-2010]
HL60 cell[accessedResource: BTO:0000738][accessDate: 04-11-2010]
HL-60 cell[accessedResource: BTO:0000738][accessDate: 04-11-2010]
BTO:0000738
HL60
Human acute myeloid leukemia established from the peripheral blood of a 35-year-old woman with acute myeloid leukemia (AML FAB M2) in 1976.
HL-60 is a cell line which is the bearer of human acute myeloid leukemia established from the peripheral blood of a 35-year-old woman with acute myeloid leukemia (AML FAB M2) in 1976.
HL-60 cell
MCC:0000426
SK-MEL-28
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311933
CS57512 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311933
CS57512
James Malone
gene
BTO:0001099
blastocyst
Blastosphere
An embryo made up of two groups of cells. One group will develop into the fetus and the other will become the placenta.
The modified blastula of a placental mammal.[accessedResource: BTO:0001099][accessDate: 04-11-2010]
NCIt:C13739
Blastosphere[accessedResource: NCIt:C13739][accessDate: 04-11-2010]
The modified blastula of a placental mammal.
James Malone
Blastula[accessedResource: NCIt:C13739][accessDate: 04-11-2010]
Blastula
An embryo made up of two groups of cells. One group will develop into the fetus and the other will become the placenta.[accessedResource: NCIt:C13739][accessDate: 04-11-2010]
Helen Parkinson
SNP array is a DNA array used to detect polymorphisms in DNA samples
SNP array
SW780
James Malone
Ele Holloway
Helen Parkinson
aggressive behaviour
aggression
Agressive behaviour is the process of engaging on hostile, affective, or retaliatory aggression and instrumental, predatory, or goal-oriented aggression towards other individuals.
aggressive behavior
pelvis
The inferior portion of the trunk of the body, bounded anteriorly and laterally by the two hip bones and posteriorly by the sacrum and coccyx. The pelvis is divided by a plane passing through the terminal lines into the p. major superiorly and the p. minor inferiorly.
BTO:0001006
http://sig.biostr.washington.edu/fma3.0#Pelvis
Subdivision of abdomen, which is demarcated from the abdomen proper by the plane of the superior pelvic aperture, and from the perineum by the inferior surface of the pelvic diaphragm; together with the abdomen proper, it constitutes the abdomen. Examples: There is only one pelvis.
The inferior portion of the trunk of the body, bounded anteriorly and laterally by the two hip bones and posteriorly by the sacrum and coccyx. The pelvis is divided by a plane passing through the terminal lines into the p. major superiorly and the p. minor inferiorly.[accessedResource: BTO:0001006][accessDate: 04-11-2010]
BTO:0000093
MCF-7 cell
James Malone
MCF7 cell[accessedResource: BTO:0000093][accessDate: 04-11-2010]
Human breast adenocarcinoma, established from the pleural effusion of a 69-year-old caucasian woman with metastatic mammary carcinoma (after radio- and hormone therapy) in 1970; cells were described of being positive for cytoplasmic estrogen receptors and having the capability to form domes.
MCF-7 cell[accessedResource: BTO:0000093][accessDate: 04-11-2010]
MCF-7
MCF7 cell
Human breast adenocarcinoma, established from the pleural effusion of a 69-year-old caucasian woman with metastatic mammary carcinoma (after radio- and hormone therapy) in 1970; cells were described of being positive for cytoplasmic estrogen receptors and having the capability to form domes.[accessedResource: BTO:0000093][accessDate: 04-11-2010]
MCC:0000307
MCF7
http://www.ebi.ac.uk/efo/EFO_0001892
CHEBI:50646
An agent that inhibits bone resorption and/or favor bone mineralization and bone regeneration. Used to heal bone fractures and to treat metabolic bone diseases.
bone density conservation agent
James Malone
The total quantity or strength of a substance administered at one time.
dose
James Malone
sulindac
cis-5-Fluoro-2-methyl-1-((4-(methylsulfinyl)phenyl)methylene)-1H-indene-3-acetic acid
InChI=1/C20H17FO3S/c1-12-17(9-13-3-6-15(7-4-13)25(2)24)16-8-5-14(21)10-19(16)18(12)11-20(22)23/h3-10H,11H2,1-2H3,(H,22,23)/b17-9-/f/h22H
CHEBI:9352
{(1Z)-5-fluoro-2-methyl-1-[4-(methylsulfinyl)benzylidene]-1H-inden-3-yl}acetic acid
Clinoril
cis-5-Fluoro-2-methyl-1-((p-methylsulfinyl)benzylidene)indene-3-acetic acid
James Malone
A sulfoxide that has formula C20H17FO3S.
C20H17FO3S
http://www.ebi.ac.uk/efo/EFO_0001618
InChIKey=MLKXDPUZXIRXEP-CFZDBRNIDX
Sulindacum
CC1=C(CC(O)=O)c2cc(F)ccc2\\C1=C/c3ccc(cc3)S(C)=O
sulindaco
(Z)-5-Fluoro-2-methyl-1-((p-(methylsulfinyl)phenyl)methylene)-1H-indene-3-acetic acid
birnlex_7079
Theiler stage 24
Tomasz Adamusiak
Jie Zheng
Substance produced by, and obtained from, certain living cells (especially bacteria, yeasts and moulds), or an equivalent synthetic substance, which is biostatic or biocidal at low concentrations to some other form of life, especially pathogenic or noxious organisms.
antibiotics
http://www.ebi.ac.uk/efo/EFO_0001485
antibiotique
James Malone
Antibiotika
Antibiotikum
antibiotic
GM07055
James Malone
µmol
Tomasz Adamusiak
James Malone
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#umol
http://www.ebi.ac.uk/efo/EFO_0001801
true
umol
A substance unit equal to a millionth of a mol or 10^[-6] mol.
MO_752
micromole
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#umol[accessedResource: MO_752][accessDate: 04-11-2010]
true
Gy
An absorbed dose unit which is equal to the absorption of one joule of radiation energy by one kilogram of matter.
Gray
NCIt:C16352
Tomasz Adamusiak
Afro American
Black
African American
A term used in the United States to categorize a population group comprised of persons having origins in any of the black racial groups of Africa. Includes population subgroups (e.g., Kenyan, Nigerian, Haitian). The concept refers also to individuals who classify themselves as described.
Black Populations[accessedResource: NCIt:C16352][accessDate: 04-11-2010]
BLACK OR AFRICAN AMERICAN[accessedResource: NCIt:C16352][accessDate: 04-11-2010]
A term used in the United States to categorize a population group comprised of persons having origins in any of the black racial groups of Africa. Includes population subgroups (e.g., Kenyan, Nigerian, Haitian). The concept refers also to individuals who classify themselves as described.[accessedResource: NCIt:C16352][accessDate: 04-11-2010]
Black[accessedResource: NCIt:C16352][accessDate: 04-11-2010]
Black Populations
Afro American[accessedResource: NCIt:C16352][accessDate: 04-11-2010]
BLACK OR AFRICAN AMERICAN
ZFS:0000033
hatching long-pec
James Malone
James Malone
PO:0009062
BTO:0001733
GRO:000543[accessedResource: BTO:0001733][accessDate: 04-11-2010]
The female reproductive organs of a flower; the pistil or pistils considered as a group.[accessedResource: BTO:0001733][accessDate: 04-11-2010]
GRO:000543
gynoecium
The female reproductive organs of a flower; the pistil or pistils considered as a group.
true
UO:0000035
http://www.ebi.ac.uk/efo/EFO_0001726
A time unit which is approximately equal to the length of time of one of cycle of the moon's phases which is science is taken to be equal to 30 days.
A month is a derived time unit which is approximately equal to the length of time of one of cycle of the moon's phases which is science is taken to be equal to 30 days.
month
James Malone
Other specified diseases of pericardium[accessedResource: ICD9:423.8][accessDate: 04-11-2010]
GeneRIF:15375785
Other disorders of papillary muscle
GeneRIF:12818409
Cardiovascular Disorders[accessedResource: NCIt:C2931][accessDate: 04-11-2010]
GeneRIF:12943734
[X]Other specified diseases of pericardium (disorder)[accessedResource: SNOMEDCT:195553003][accessDate: 04-11-2010]
GeneRIF:14967720
GeneRIF:15459608
CVD
ICD9:429
ICD9:423.8
ICD9:429.79
GeneRIF:15780075
SNOMEDCT:195646003
Other heart disease NOS (disorder)
Other disorders of papillary muscle[accessedResource: ICD9:429.81][accessDate: 04-11-2010]
CIRCULATORY DISEASE NOS[accessedResource: ICD9:459.9][accessDate: 04-11-2010]
CVD, NOS[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
GeneRIF:12669427
Disease affecting entire cardiovascular system (disorder)[accessedResource: SNOMEDCT:105980002][accessDate: 04-11-2010]
Cardiovascular disorder, NOS
GeneRIF:15939053
Pathological conditions involving the CARDIOVASCULAR SYSTEM including the HEART; the BLOOD VESSELS; or the PERICARDIUM.
Disorder of cardiovascular system (disorder)
Other diseases of endocardium[accessedResource: SNOMEDCT:266241000][accessDate: 04-11-2010]
Other ill-defined heart diseases[accessedResource: ICD9:429.8][accessDate: 04-11-2010]
Other diseases of pericardium
GeneRIF:12476328
SNOMEDCT:195588003
Disorder of the circulatory system[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
Cardiovascular Disease (CVD)
GeneRIF:16102632
GeneRIF:15627719
CVS disease[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
GeneRIF:15282206
ICD9:429.2
PAPILLARY MUSCLE DIS NEC
Other sequelae of myocardial infarction, not elsewhere classified[accessedResource: ICD9:429.79][accessDate: 04-11-2010]
SNOMEDCT:266309008
GeneRIF:12056504
[X]Other specified diseases of pericardium
CIRCULATORY DISEASE NOS
GeneRIF:11935372
GeneRIF:12065317
Cardiovascular Disorders
GeneRIF:15340249
Other specified pericardial disease NOS (disorder)
ASCVD
A non-neoplastic or neoplastic disorder affecting the heart or the vessels (arteries, veins and lymph vessels). Representative examples of non-neoplastic cardiovascular disorders are endocarditis and hypertension. Representative examples of neoplastic cardiovascular disorders are endocardial myxoma and angiosarcoma. -- 2003
Disease of cardiovascular system (disorder)[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
GeneRIF:16161810
GeneRIF:15166781
A non-neoplastic or neoplastic disorder affecting the heart or the vessels (arteries, veins and lymph vessels). Representative examples of non-neoplastic cardiovascular disorders are endocarditis and hypertension. Representative examples of neoplastic cardiovascular disorders are endocardial myxoma and angiosarcoma.[accessedResource: NCIt:C2931][accessDate: 04-11-2010]
ICD9:420-429.99
GeneRIF:12204797
A body system disease which occurs in the blood, heart, blood vessels or the lymphatic system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells or lymph to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis.[accessedResource: DOID:1287][accessDate: 04-11-2010]
Disease of cardiovascular system
[X]Other forms of heart disease (disorder)
GeneRIF:15856070
GeneRIF:15780820
ICD9:423
GeneRIF:15598684
Diseases, Cardiovascular
Other diseases of endocardium (disorder)
Other ill-defined heart disease (disorder)[accessedResource: SNOMEDCT:266251004][accessDate: 04-11-2010]
Other ill-defined heart disease NOS
GeneRIF:15634270
ICD9:429.8
Disease affecting entire cardiovascular system[accessedResource: SNOMEDCT:105980002][accessDate: 04-11-2010]
Other diseases of pericardium[accessedResource: SNOMEDCT:194962004][accessDate: 04-11-2010]
SNOMEDCT:195553003
GeneRIF:12195022
CVS disease
GeneRIF:15619076
Other diseases of pericardium (disorder)[accessedResource: SNOMEDCT:194962004][accessDate: 04-11-2010]
SNOMEDCT:105980002
ASCVD[accessedResource: ICD9:429.2][accessDate: 04-11-2010]
SNOMEDCT:266241000
[X]Other ill-defined heart diseases[accessedResource: SNOMEDCT:195588003][accessDate: 04-11-2010]
GeneRIF:15618240
Other ill-defined heart disease NOS[accessedResource: SNOMEDCT:195150009][accessDate: 04-11-2010]
PERICARDIAL DISEASE NEC[accessedResource: ICD9:423.8][accessDate: 04-11-2010]
GeneRIF:15116245
Disorder of circulatory system, NOS
GeneRIF:12606536
Disorder of cardiovascular system (disorder)[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
Cardiovascular disease, NOS
GeneRIF:12052841
OTHER SEQUELAE OF MI NEC[accessedResource: ICD9:429.79][accessDate: 04-11-2010]
SNOMEDCT:266251004
Other forms of heart disease (disorder)
DISEASES OF THE CIRCULATORY SYSTEM[accessedResource: ICD9:390-459.99][accessDate: 04-11-2010]
Other heart disease[accessedResource: SNOMEDCT:266309008][accessDate: 04-11-2010]
[X]Other ill-defined heart diseases
cardiovascular system disease[accessedResource: DOID:1287][accessDate: 04-11-2010]
NCIt:C2931
GeneRIF:12431476
[X]Other specified diseases of pericardium (disorder)
GeneRIF:15302608
GeneRIF:12365916
Cardiovascular system disease
GeneRIF:12911596
Other heart disease (disorder)[accessedResource: SNOMEDCT:266309008][accessDate: 04-11-2010]
GeneRIF:16103519
GeneRIF:16224057
GeneRIF:15226189
Cardiovascular Disease (CVD)[accessedResource: NCIt:C2931][accessDate: 04-11-2010]
Disease of cardiovascular system[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
Other diseases of pericardium (disorder)
SNOMEDCT:195151008
GeneRIF:15576850
ICD9:390-459.99
ICD9:429.89
GeneRIF:15735209
DISEASES OF THE CIRCULATORY SYSTEM
Disorder of cardiovascular system
CARDIOVASC DIS[accessedResource: MSH:D002318][accessDate: 04-11-2010]
GeneRIF:15668644
Other ill-defined heart disease NOS (disorder)
GeneRIF:11821707
GeneRIF:15314690
disease of subdivision of hemolymphoid system[accessedResource: DOID:1287][accessDate: 04-11-2010]
GeneRIF:16159596
CVD[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
SNOMEDCT:195150009
Other heart disease (disorder)
A body system disease which occurs in the blood, heart, blood vessels or the lymphatic system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells or lymph to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis.
Certain sequelae of myocardial infarction, not elsewhere classified
ILL-DEFINED HRT DIS NEC[accessedResource: ICD9:429.89][accessDate: 04-11-2010]
SNOMEDCT:49601007
ICD9:429.7
GeneRIF:15591764
Unspecified circulatory system disorder
Disease affecting entire cardiovascular system
GeneRIF:15531184
[X]Other forms of heart disease
Other specified pericardial disease NOS (disorder)[accessedResource: SNOMEDCT:266239001][accessDate: 04-11-2010]
SNOMEDCT:195594006
GeneRIF:11744804
GeneRIF:11934214
GeneRIF:15648548
circulatory system disease
Circulatory system disease NOS (disorder)
GeneRIF:15565175
Cardiovascular disease, unspecified
Other specified pericardial disease NOS[accessedResource: SNOMEDCT:266239001][accessDate: 04-11-2010]
Other forms of heart disease
[X]Other ill-defined heart diseases (disorder)
Certain sequelae of myocardial infarction, not elsewhere classified[accessedResource: ICD9:429.7][accessDate: 04-11-2010]
[X]Cardiovascular disease, unspecified[accessedResource: SNOMEDCT:195594006][accessDate: 04-11-2010]
Cardiovascular Disorder
GeneRIF:15855354
Other forms of heart disease[accessedResource: SNOMEDCT:194901009][accessDate: 04-11-2010]
SNOMEDCT:194962004
ICD9:459.9
GeneRIF:15750260
Circulatory system disease NOS
[X]Other specified diseases of pericardium[accessedResource: SNOMEDCT:195553003][accessDate: 04-11-2010]
Other heart disease
GeneRIF:16028070
GeneRIF:15528465
[X]Other forms of heart disease (disorder)[accessedResource: SNOMEDCT:195551001][accessDate: 04-11-2010]
Cardiovascular Disorder[accessedResource: NCIt:C2931][accessDate: 04-11-2010]
Other sequelae of myocardial infarction, not elsewhere classified
Other specified diseases of pericardium
Other heart disease NOS
SNOMEDCT:195551001
GeneRIF:15683719
CARDIOVASC DIS
Unspecified circulatory system disorder[accessedResource: ICD9:459.9][accessDate: 04-11-2010]
Circulatory system disease NOS (disorder)[accessedResource: SNOMEDCT:195646003][accessDate: 04-11-2010]
Other pericardial disease NOS
GeneRIF:16109314
Cardiovascular disease, unspecified[accessedResource: ICD9:429.2][accessDate: 04-11-2010]
GeneRIF:15257013
Ill-defined descriptions and complications of heart disease
SNOMEDCT:266240004
SNOMEDCT:194901009
A non-neoplastic or neoplastic disorder affecting the heart or the vessels (arteries, veins and lymph vessels). Representative examples of non-neoplastic cardiovascular disorders are endocarditis and hypertension. Representative examples of neoplastic cardiovascular disorders are endocardial myxoma and angiosarcoma.
GeneRIF:15240653
GeneRIF:12861348
GeneRIF:16046727
GeneRIF:12187094
GeneRIF:12201209
CVD, NOS
Other ill-defined heart disease NOS (disorder)[accessedResource: SNOMEDCT:195150009][accessDate: 04-11-2010]
Other diseases of endocardium
Other diseases of endocardium (disorder)[accessedResource: SNOMEDCT:266241000][accessDate: 04-11-2010]
Disease of cardiovascular system, NOS[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
GeneRIF:12743009
GeneRIF:11985486
[X]Cardiovascular disease, unspecified (disorder)[accessedResource: SNOMEDCT:195594006][accessDate: 04-11-2010]
GeneRIF:16324215
DOID:1287
[X]Other ill-defined heart diseases (disorder)[accessedResource: SNOMEDCT:195588003][accessDate: 04-11-2010]
Disorder of circulatory system
Other heart disease NOS[accessedResource: SNOMEDCT:195151008][accessDate: 04-11-2010]
GeneRIF:12898464
[X]Cardiovascular disease, unspecified (disorder)
GeneRIF:15010202
GeneRIF:15351863
Disorder of the circulatory system
SNOMEDCT:266239001
James Malone
MSH:D002318
Other ill-defined heart disease[accessedResource: SNOMEDCT:266251004][accessDate: 04-11-2010]
[X]Other forms of heart disease[accessedResource: SNOMEDCT:195551001][accessDate: 04-11-2010]
Other forms of heart disease (disorder)[accessedResource: SNOMEDCT:194901009][accessDate: 04-11-2010]
GeneRIF:15008790
Circulatory system disease NOS[accessedResource: SNOMEDCT:195646003][accessDate: 04-11-2010]
GeneRIF:15653176
Disorder of circulatory system, NOS[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
Other ill-defined heart diseases
Other pericardial disease NOS[accessedResource: SNOMEDCT:266240004][accessDate: 04-11-2010]
Other ill-defined heart disease (disorder)
Disease of cardiovascular system (disorder)
Disease affecting entire cardiovascular system (disorder)
GeneRIF:14983217
Diseases, Cardiovascular[accessedResource: MSH:D002318][accessDate: 04-11-2010]
GeneRIF:16132053
GeneRIF:14998943
GeneRIF:12052142
PERICARDIAL DISEASE NEC
disease of subdivision of hemolymphoid system
Other pericardial disease NOS (disorder)[accessedResource: SNOMEDCT:266240004][accessDate: 04-11-2010]
Disorder of circulatory system[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
GeneRIF:15342688
Ill-defined descriptions and complications of heart disease[accessedResource: ICD9:429][accessDate: 04-11-2010]
Disease of cardiovascular system, NOS
GeneRIF:11912547
GeneRIF:12867276
GeneRIF:12690916
Other specified pericardial disease NOS
ILL-DEFINED HRT DIS NEC
cardiovascular disease
GeneRIF:15823283
GeneRIF:16018179
Disorder of cardiovascular system[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
GeneRIF:16159602
Pathological conditions involving the CARDIOVASCULAR SYSTEM including the HEART; the BLOOD VESSELS; or the PERICARDIUM.[accessedResource: MSH:D002318][accessDate: 04-11-2010]
GeneRIF:11822583
PAPILLARY MUSCLE DIS NEC[accessedResource: ICD9:429.81][accessDate: 04-11-2010]
Other pericardial disease NOS (disorder)
Other heart disease NOS (disorder)[accessedResource: SNOMEDCT:195151008][accessDate: 04-11-2010]
GeneRIF:16260427
GeneRIF:15869613
ICD9:429.81
GeneRIF:15859024
[X]Cardiovascular disease, unspecified
OTHER SEQUELAE OF MI NEC
Cardiovascular disease, NOS[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
ICD9:424
GeneRIF:15363820
Other ill-defined heart disease
Cardiovascular disorder, NOS[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
plasma cell neoplasm
James Malone
http://www.ratmap.org/ShowStrainDetails.html?strain=72
F344
Fisher344 is a rat strain as described in http://www.ratmap.org/ShowStrainDetails.html?strain=72
Fischer 344
James Malone
FBbt:00005422
A0amnioser
A0amnioser[accessedResource: FBbt:00005422][accessDate: 04-11-2010]
amnioserosa anlage in statu nascendi
James Malone
A process whereby a stress state is applied parallel or tangential to a face of the material.
shear stressing
James Malone
DOID:5864
dedifferentiated chondrosarcoma
James Malone
An aggressive morphologic variant of chondrosarcoma. It is composed of a low grade chondrosarcoma and a high grade non-cartilagenous sarcomatous component. Due to the aggressive nature of the disease, its prognosis is poor.[accessedResource: NCIt:C6476][accessDate: 04-11-2010]
SNOMEDCT:128776008
An aggressive morphologic variant of chondrosarcoma. It is composed of a low grade chondrosarcoma and a high grade non-cartilagenous sarcomatous component. Due to the aggressive nature of the disease, its prognosis is poor.
Dedifferentiated chondrosarcoma (morphologic abnormality)
NCIt:C6476
Dedifferentiated chondrosarcoma (morphologic abnormality)[accessedResource: DOID:5864][accessDate: 04-11-2010]
amoxicillin
CHEBI:2676
amoxicilina
Amopenixin
James Malone
6-(p-hydroxy-alpha-aminophenylacetamido)penicillanic acid
InChI=1/C16H19N3O5S/c1-16(2)11(15(23)24)19-13(22)10(14(19)25-16)18-12(21)9(17)7-3-5-8(20)6-4-7/h3-6,9-11,14,20H,17H2,1-2H3,(H,18,21)(H,23,24)/t9-,10-,11+,14-/m1/s1/f/h18,23H
amoxicillinum
amoxycillin
AX
(2S,5R,6R)-6-{[(2R)-2-amino-2-(4-hydroxyphenyl)acetyl]amino}-3,3-dimethyl-7-oxo-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylic acid
p-hydroxyampicillin
http://www.ebi.ac.uk/efo/EFO_0002003
C16H19N3O5S
6beta-[(2R)-2-amino-2-(4-hydroxyphenyl)acetamido]-2,2-dimethylpenam-3alpha-carboxylic acid
AMPC
Moxal
Amolin
A penicillin that has formula C16H19N3O5S.
amoxicilline
alpha-amino-p-hydroxybenzylpenicillin
A penicillin in which the substituent at position 6 of the penam ring is a 2-amino-2-(4-hydroxyphenyl)acetamido group.
Amoxicillin anhydrous
[H][C@]12SC(C)(C)[C@@H](N1C(=O)[C@H]2NC(=O)[C@H](N)c1ccc(O)cc1)C(O)=O
InChIKey=LSQZJLSUYDQPKJ-VLWBPTPADT
Clamoxyl
thyroid carcinoma
DOID:3963
James Malone
head and neck cancer, Thyroid
head and neck cancer, Thyroid[accessedResource: DOID:3963][accessDate: 04-11-2010]
thyroid cancer
http://www.arabidopsis.org/servlets/TairObject?id=1005158733&type=germplasm
CS57709 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158733&type=germplasm
CS57709
James Malone
CC(C)c1cccc(C(C)C)c1O
Rapinovet
2,6-Diisopropylphenol
InChI=1/C12H18O/c1-8(2)10-6-5-7-11(9(3)4)12(10)13/h5-9,13H,1-4H3
A phenol that has formula C12H18O.
propofolum
2,6-bis(propan-2-yl)phenol
C12H18O
Diprivan
Disoprivan
http://www.ebi.ac.uk/efo/EFO_0001599
Disoprofol
propofol
2,6-bis(1-methylethyl)phenol
James Malone
CHEBI:44915
InChIKey=OLBCVFGFOZPWHH-UHFFFAOYAE
ALPHA-1-ANTITRYPSIN DEF
alpha-1-antitrypsin deficiency
A lung disease that is characterized as a genetic disorder caused by defective production of alpha 1-antitrypsin (A1AT), leading to decreased A1AT activity in the blood and lungs, and deposition of excessive abnormal A1AT protein in liver cells. Alpha-1 antitrypsin works to protect the lungs from a naturally occuring destructive enzyme that is produced by the lungs in response to infections and toxins (such as cigarette smoke). Without enough A1AT, these enzymes slowly destroy the lung tissue causing emphysema. The symptoms include shortness of breath, wheezing, rhonchi, and rales.[accessedResource: DOID:13372][accessDate: 04-11-2010]
alpha-1-Antitrypsin deficiency (disorder)[accessedResource: DOID:13372][accessDate: 04-11-2010]
SNOMEDCT:154771007
AAT deficiency[accessedResource: DOID:13372][accessDate: 04-11-2010]
Alpha-1-antitrypsin deficiency (disorder)
ICD9:273.4
AAT deficiency
Tomasz Adamusiak
ALPHA-1-ANTITRYPSIN DEF[accessedResource: ICD9:273.4][accessDate: 04-11-2010]
A lung disease that is characterized as a genetic disorder caused by defective production of alpha 1-antitrypsin (A1AT), leading to decreased A1AT activity in the blood and lungs, and deposition of excessive abnormal A1AT protein in liver cells. Alpha-1 antitrypsin works to protect the lungs from a naturally occuring destructive enzyme that is produced by the lungs in response to infections and toxins (such as cigarette smoke). Without enough A1AT, these enzymes slowly destroy the lung tissue causing emphysema. The symptoms include shortness of breath, wheezing, rhonchi, and rales.
DOID:13372
ductal adenocarcinoma
Ductal Breast Carcinoma[accessedResource: NCIt:C4017][accessDate: 04-11-2010]
Duct Carcinoma
ductal breast carcinoma
Ductal Carcinoma of Breast
Ductal Carcinoma of the Breast[accessedResource: NCIt:C4017][accessDate: 04-11-2010]
Duct Adenocarcinoma
Duct Adenocarcinoma[accessedResource: NCIt:C4017][accessDate: 04-11-2010]
Ductal Carcinoma
Ductal Carcinoma of Breast[accessedResource: NCIt:C4017][accessDate: 04-11-2010]
James Malone
DOID:3008
Duct Carcinoma[accessedResource: NCIt:C4017][accessDate: 04-11-2010]
Ductal Carcinoma[accessedResource: NCIt:C4017][accessDate: 04-11-2010]
NCIt:C4017
A carcinoma arising from the ducts. While ductal carcinomas can arise at other sites, this term is universally used to refer to carcinomas of the breast. Ductal carcinomas account for about two thirds of all breast cancers. Two types of ductal carcinomas have been described: Ductal carcinoma in situ (DCIS) and invasive ductal carcinoma, not otherwise specified. The latter often spreads to the axillary lymph nodes and other anatomic sites. The two forms of ductal carcinoma often coexist.[accessedResource: NCIt:C4017][accessDate: 04-11-2010]
Ductal Carcinoma of the Breast
A carcinoma arising from the ducts. While ductal carcinomas can arise at other sites, this term is universally used to refer to carcinomas of the breast. Ductal carcinomas account for about two thirds of all breast cancers. Two types of ductal carcinomas have been described: Ductal carcinoma in situ (DCIS) and invasive ductal carcinoma, not otherwise specified. The latter often spreads to the axillary lymph nodes and other anatomic sites. The two forms of ductal carcinoma often coexist.
http://www.arabidopsis.org/servlets/TairObject?id=1005158766&type=germplasm
CS57742 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158766&type=germplasm
CS57742
James Malone
A g1e er4 is a GATA-1-null erythroblast.
G1E-ER4
Natural Language Generator 8th April 2010
James Malone
Ele Holloway
BTO:0000252
The outer membrane of the two membranes enclosing the embryo in reptiles, birds, and mammals. In placental mammals it contributes to the development of the placenta.
The chorion is one of the membranes that exists during pregnancy between the developing fetus and mother. It is formed by extraembryonic mesoderm and the two layers of trophoblast and surrounds the embryo and other membranes.
The outer membrane of the two membranes enclosing the embryo in reptiles, birds, and mammals. In placental mammals it contributes to the development of the placenta.[accessedResource: BTO:0000252][accessDate: 04-11-2010]
chorion
James Malone
Gastritis Associated with Crohn Disease[accessedResource: NCIt:C27837][accessDate: 04-11-2010]
NCIt:C27837
Crohn's disease
DOID:4039
James Malone
Crohn's Associated Gastritis[accessedResource: NCIt:C27837][accessDate: 04-11-2010]
Gastritis Associated with Crohn's Disease
Crohn's associated gastritis
Gastritis Associated with Crohn's Disease[accessedResource: NCIt:C27837][accessDate: 04-11-2010]
Gastritis Associated with Crohn Disease
MAT:0000415
James Malone
BTO:0001152
The lower part of the axis of a plant embryo or seedling.[accessedResource: BTO:0001152][accessDate: 04-11-2010]
The lower part of the axis of a plant embryo or seedling.
radicle
PO:0020031
Ele Holloway
A498
James Malone
A tumor of meningothelial cells that are manifested in the central nervous system and arise from the arachnoid "cap" cells of the arachnoid villi in the meninges.
meningioma, benign, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:3565][accessDate: 04-11-2010]
DOID:3565
meningioma NOS (morphologic abnormality)[accessedResource: DOID:3565][accessDate: 04-11-2010]
Tomasz Adamusiak
meningiomas (morphologic abnormality)[accessedResource: DOID:3565][accessDate: 04-11-2010]
meningioma NOS[accessedResource: DOID:3565][accessDate: 04-11-2010]
meningioma, benign, no ICD-O subtype (morphologic abnormality)
A tumor of meningothelial cells that are manifested in the central nervous system and arise from the arachnoid "cap" cells of the arachnoid villi in the meninges.[accessedResource: DOID:3565][accessDate: 04-11-2010]
meningiomas (morphologic abnormality)
meningioma NOS
meningioma
meningioma NOS (morphologic abnormality)
Prerolandic gyrus[accessedResource: FMA:61894][accessDate: 04-11-2010]
Precentral convolution
precentral gyrus
James Malone
Precentral convolution[accessedResource: FMA:61894][accessDate: 04-11-2010]
FMA:61894
Prerolandic gyrus
NCIt:C33393
PMID: 11246871
nestin positive islet-derived progenitor cell
Tomasz Adamusiak
Jie Zheng
James Malone
corpora allata[accessedResource: BTO:0000291][accessDate: 04-11-2010]
The primordium that will form the embryonic/larval corpus allatum, a substructure of the embryonic/larval ring gland. It is a paired structure that becomes distinct in early dorsal closure between the head mesoderm and the epidermis of the gnathal segments. During dorsal closure the paired primordia move dorsally to meet and fuse above the cardioblasts of the developing aorta.[accessedResource: FBbt:00001716][accessDate: 04-11-2010]
FBbt:00001716
BTO:0000291
One of a pair of separate or fused bodies in many insects that are sometimes closely associated with the corpora cardiaca and that secrete hormones (as juvenile hormone).[accessedResource: BTO:0000291][accessDate: 04-11-2010]
The primordium that will form the embryonic/larval corpus allatum, a substructure of the embryonic/larval ring gland. It is a paired structure that becomes distinct in early dorsal closure between the head mesoderm and the epidermis of the gnathal segments. During dorsal closure the paired primordia move dorsally to meet and fuse above the cardioblasts of the developing aorta.
One of a pair of separate or fused bodies in many insects that are sometimes closely associated with the corpora cardiaca and that secrete hormones (as juvenile hormone).
MAT:0000210
FBbt:00005800
corpus allatum
corpora allata
corpus allatum primordium
A neurosecretory organ forming part of the retrocerebral complex.
A neurosecretory organ forming part of the retrocerebral complex.[accessedResource: FBbt:00005800][accessDate: 04-11-2010]
corpus allatum primordium[accessedResource: FBbt:00001716][accessDate: 04-11-2010]
Selen
James Malone
InChI=1/Se
A chalcogen that has formula Se.
[Se]
selenium
selenium atom
http://www.ebi.ac.uk/efo/EFO_0001610
selenio
InChIKey=BUGBHKTXTAQXES-UHFFFAOYAK
CHEBI:27568
34Se
gasserian ganglion[accessedResource: BTO:0001231][accessDate: 04-11-2010]
BTO:0001231
A prominent collection of touch-sensory neurons of the trigeminal or fifth cranial nerve, positioned beside the brain between the eye and the ear. Kimmel et al, 1995.
ganglion of trigeminal nerve
James Malone
EV:0100491
ganglion trigeminale[accessedResource: BTO:0001231][accessDate: 04-11-2010]
FMAID:52618
A prominent collection of touch-sensory neurons of the trigeminal or fifth cranial nerve, positioned beside the brain between the eye and the ear. Kimmel et al, 1995.[accessedResource: TAO:0000295][accessDate: 04-11-2010]
ganglion of trigeminal nerve[accessedResource: BTO:0001231][accessDate: 04-11-2010]
gasserian ganglion
Gasser's ganglion[accessedResource: BTO:0001231][accessDate: 04-11-2010]
TAO:0000295
MA:0001080
Semilunar ganglion[accessedResource: FMAID:52618][accessDate: 04-11-2010]
Semilunar ganglion
MAT:0000511
XAO:0000428
A ganglion on the sensory root of the fifth cranial nerve, situated in a cleft within the dura mater (trigeminal cave) on the anterior surface of the petrous portion of the temporal bone, and giving off the ophthalmic and maxillary and part of the mandibular nerve; it contains the cells of origin of most of the sensory fibers of the trigeminal nerve.[accessedResource: BTO:0001231][accessDate: 04-11-2010]
gV
Gasser's ganglion
gV[accessedResource: TAO:0000295][accessDate: 04-11-2010]
A ganglion on the sensory root of the fifth cranial nerve, situated in a cleft within the dura mater (trigeminal cave) on the anterior surface of the petrous portion of the temporal bone, and giving off the ophthalmic and maxillary and part of the mandibular nerve; it contains the cells of origin of most of the sensory fibers of the trigeminal nerve.
ganglion trigeminale
trigeminal ganglion
http://www.arabidopsis.org/servlets/TairObject?id=1005158567&type=germplasm
CS57543 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158567&type=germplasm
CS57543
James Malone
cotyledon
PO:0020030
BTO:0000300
GRO:0005358
A seed leaf; the first leaf formed in a seed.[accessedResource: BTO:0000300][accessDate: 04-11-2010]
GRO:0005358[accessedResource: BTO:0000300][accessDate: 04-11-2010]
James Malone
MAT:0000359
A seed leaf; the first leaf formed in a seed.
MO_560
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#genotyping_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#genotyping_design[accessedResource: MO_560][accessDate: 04-11-2010]
genotyping design
Tomasz Adamusiak
true
MO_771
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#gene_knock_out
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#gene_knock_out[accessedResource: MO_771][accessDate: 04-11-2010]
gene knock out
Tomasz Adamusiak
Jie Zheng
tumour of cranial and spinal nerves
Tomasz Adamusiak
James Malone
excitatory amino acid agonists
http://www.ebi.ac.uk/efo/EFO_0001882
CHEBI:50103
An agent that binds to and activates excitatory amino acid receptors.
excitatory amino acid agonist
James Malone
ZFS:0000015
blastula dome
James Malone
CHEBI:28285
http://www.ebi.ac.uk/efo/EFO_0001585
oligomycin A
CL:0000081
A cell found predominately in the blood.
A cell found predominately in the blood.[accessedResource: CL:0000081][accessDate: 04-11-2010]
blood cell
Tomasz Adamusiak
NCI Metathesaurus: C0318594
Drosophila C virus
James Malone
MO_930
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#oligo_synthesizer
http://www.ebi.ac.uk/efo/EFO_0002022
An instrument used to chemically synthesize oligonucleotides.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#oligo_synthesizer[accessedResource: MO_930][accessDate: 04-11-2010]
oligonucleotide synthesizer
James Malone
sodium (o-(2,6-dichloroanilino)phenyl)acetate
(o-(2,6-dichloroanilino)phenyl)acetic acid monosodium salt
http://www.ebi.ac.uk/efo/EFO_0001520
(o-(2,6-dichloroanilino)phenyl)acetic acid sodium salt
InChI=1/C14H11Cl2NO2.Na/c15-10-5-3-6-11(16)14(10)17-12-7-2-1-4-9(12)8-13(18)19;/h1-7,17H,8H2,(H,18,19);/q;+1/p-1/fC14H10Cl2NO2.Na/q-1;m
2-((2,6-dichlorophenyl)amino)benzeneacetic acid monosodium salt
C14H10Cl2NO2.Na
[Na+].[O-]C(=O)Cc1ccccc1Nc1c(Cl)cccc1Cl
sodium {2-[(2,6-dichlorophenyl)amino]phenyl}acetate
InChIKey=KPHWPUGNDIVLNH-VDPPZFTLCG
diclofenac sodium
sodium (o-((2,6-dichlorophenyl)amino)phenyl)acetate
C14H10Cl2NNaO2
The sodium salt of diclofenac.
An organic sodium salt that has formula C14H10Cl2NNaO2.
CHEBI:4509
BTO:0000258
The choroid plexus is tissue located in the spaces inside the brain called ventricles. The choroid plexus makes the fluid that fills the ventricles and surrounds the brain and spinal cord.
The choroid plexus is a brain structure located in the spaces inside the brain called ventricles. The choroid plexus makes the fluid that fills the ventricles and surrounds the brain and spinal cord.
The choroid plexus is tissue located in the spaces inside the brain called ventricles. The choroid plexus makes the fluid that fills the ventricles and surrounds the brain and spinal cord.[accessedResource: BTO:0000258][accessDate: 04-11-2010]
choroid plexus
James Malone
Cell line derived from squamous cell carcinoma of the hypopharynx.
James Malone
Ele Holloway
FaDu
Tomasz Adamusiak
FMAID:5888
dorsal root ganglion
spinal ganglion
SAEL:30
WBbt:0005189
Trunk ganglion which is located adjacent to the spine on a dorsal root and contains the cell bodies of afferent sensory nerves.
EMAPA:18372
dorsal root ganglia
Trunk ganglion which is located adjacent to the spine on a dorsal root and contains the cell bodies of afferent sensory nerves.[accessedResource: ZFA:0000200][accessDate: 04-11-2010]
NIFSTD:birnlex_2596
EMAPA:16668
Spinal ganglion[accessedResource: FMAID:5888][accessDate: 04-11-2010]
Ganglion spinalis[accessedResource: FMAID:5888][accessDate: 04-11-2010]
MA:0000232
dorsal root ganglia[accessedResource: TAO:0000200][accessDate: 04-11-2010]
EVM:2000213
DRG
ZFA:0000200
Ganglion spinalis
MAT:0000162
EHDAA:2899
DRG[accessedResource: TAO:0000200][accessDate: 04-11-2010]
James Malone
TAO:0000200
4,7,10,13,16,19-docosahexaenoic acid
Doconexent
(4Z,7Z,10Z,13Z,16Z,19Z)-Docosahexaenoic acid
CC\\C=C/C\\C=C/C\\C=C/C\\C=C/C\\C=C/C\\C=C/CCC(O)=O
CHEBI:28125
C22H32O2
A docosahexaenoic acid that has formula C22H32O2.
Docosahexaenoic acid
all-cis-docosa-4,7,10,13,16,19-hexaenoic acid
InChIKey=MBMBGCFOFBJSGT-YALXRAKKDU
InChI=1/C22H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-22(23)24/h3-4,6-7,9-10,12-13,15-16,18-19H,2,5,8,11,14,17,20-21H2,1H3,(H,23,24)/b4-3-,7-6-,10-9-,13-12-,16-15-,19-18-/f/h23H
(4Z,7Z,10Z,13Z,16Z,19Z)-docosa-4,7,10,13,16,19-hexaenoic acid
http://www.ebi.ac.uk/efo/EFO_0001480
2.6.1
true
obsolete_colorectal carcinoma
James Malone
Use http://www.ebi.ac.uk/efo/EFO_0000365 colorectal adenocarcinoma
James Malone
lipocyte
adipocyte
adipose cell
fat cell
A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of tryglycerides.
CL:0000136
A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of triglycerides.
adipose cell[accessedResource: CL:0000136][accessDate: 04-11-2010]
adipocyte[accessedResource: CL:0000136][accessDate: 04-11-2010]
A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of triglycerides.[accessedResource: CL:0000136][accessDate: 04-11-2010]
In most female insects, an ectodermal pouch derived from the posteroventral part of abdominal segment VIII (possibly IX in some insects) and sometimes adjacent parts of the abdominal venter; ending anteriorly at the posterior end of the common oviduct. In mosquitoes and some other insects, the roof of the vagina is formed by the venter of abdominal segment IX; partially divided transversely by the spermathecal eminence and sometimes the upper vaginal sclerites.
bursa copulatrix[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
genital atrium[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
upper atrium[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
FMAID:19949
caecum
MAT:0000128
genital chamber
In most female insects, an ectodermal pouch derived from the posteroventral part of abdominal segment VIII (possibly IX in some insects) and sometimes adjacent parts of the abdominal venter; ending anteriorly at the posterior end of the common oviduct. In mosquitoes and some other insects, the roof of the vagina is formed by the venter of abdominal segment IX; partially divided transversely by the spermathecal eminence and sometimes the upper vaginal sclerites.[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
BTO:0000243
caecum[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
gemeinsamer Geschlechtsgang[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
vaginal atrium
FBbt:00004925
James Malone
A canal in a female mammal that leads from the uterus to the external orifice of the genital canal.[accessedResource: BTO:0000243][accessDate: 04-11-2010]
vaginal atrium[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
bursa[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
EMAPA:18986
genital chamber[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
Organ with organ cavity which connects the cervical canal of uterus to the vestibule of vagina. Examples: There is only one vagina.
gemeinsamer Geschlechtsgang
MA:0000394
lower atrium
genital orifice
bursa copulatrix
TGMA:0000607
atrium
bursa
genital atrium
atrium[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
EV:0100117
genital orifice[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
upper atrium
lower atrium[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
TADS:0000441
vagina
A canal in a female mammal that leads from the uterus to the external orifice of the genital canal.
http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
Simpson E. M., Linder C. C., Sargent E. E., Davisson M. T., Mobraaten L. E., and Sharp J. J. (1997) Genetic variation among 129 substrains and its importance for targeted mutagenesis in mice. Nature Genet. 16, 19-27.
129 is a mouse strain as described in Jackson Laboratory http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
129 mouse strain
James Malone
Organ component of neuraxis that has as its parts the pons, cerebellum and medulla oblongata . Examples: There is only one hindbrain.
TAO:0000029
James Malone
SAEL:50
ZFA:0000029
FMAID:67687
MA:0000195
rhombencephalon
MAT:0000107
XAO:0000015
The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished here. From Neuroanatomy of the Zebrafish Brain.
Tomasz Adamusiak
The most posterior of the three principal regions of the brain, forming the rhombencephalon and all or most of the metencephalon. Kimmel et al, 1995.
EMAPA:16916
EHDAA:3514
The posterior of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain that includes the cerebellum, the medulla oblongata, and in mammals the pons and that controls autonomic functions and equilibrium.[accessedResource: BTO:0000672][accessDate: 04-11-2010]
MFO:0002340
NIFSTD:birnlex_942
rhombencephalon[accessedResource: ZFA:0000029][accessDate: 04-11-2010]
The posterior of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain that includes the cerebellum, the medulla oblongata, and in mammals the pons and that controls autonomic functions and equilibrium.
hindbrain
BTO:0000672
The most posterior of the three principal regions of the brain, forming the rhombencephalon and all or most of the metencephalon. Kimmel et al, 1995.[accessedResource: TAO:0000029][accessDate: 04-11-2010]
The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished here. From Neuroanatomy of the Zebrafish Brain.[accessedResource: ZFA:0000029][accessDate: 04-11-2010]
cyclooxygenase inhibitors
COX inhibitor
http://www.ebi.ac.uk/efo/EFO_0001845
CHEBI:35544
A compound or agent that combines with cyclooxygenases and thereby prevents its substrate-enzyme combination with arachidonic acid and the formation of eicosanoids, prostaglandins, and thromboxanes.
cyclooxygenase inhibitor
James Malone
ZFS:0000030
pharyngula prim-15
James Malone
Tomasz Adamusiak
Multiple System Atrophy Syndrome[accessedResource: NIFSTD:birnlex_12573][accessDate: 04-11-2010]
Multisystemic Atrophy
James Malone
A syndrome complex composed of three conditions which represent clinical variants of the same disease process: STRIATONIGRAL DEGENERATION; SHY-DRAGER SYNDROME; and the sporadic form of OLIVOPONTOCEREBELLAR ATROPHIES. Clinical features include autonomic, cerebellar, and basal ganglia dysfunction. Pathologic examination reveals atrophy of the basal ganglia, cerebellum, pons, and medulla, with prominent loss of autonomic neurons in the brain stem and spinal cord (MeSH).
Multisystem Atrophy
Ele Holloway
A syndrome complex composed of three conditions which represent clinical variants of the same disease process: STRIATONIGRAL DEGENERATION; SHY-DRAGER SYNDROME; and the sporadic form of OLIVOPONTOCEREBELLAR ATROPHIES. Clinical features include autonomic, cerebellar, and basal ganglia dysfunction. Pathologic examination reveals atrophy of the basal ganglia, cerebellum, pons, and medulla, with prominent loss of autonomic neurons in the brain stem and spinal cord (MeSH).[accessedResource: NIFSTD:birnlex_12573][accessDate: 04-11-2010]
multiple system atrophy
Multisystemic Atrophy[accessedResource: NIFSTD:birnlex_12573][accessDate: 04-11-2010]
DOID:4752
NIFSTD:birnlex_12573
Multiple system atrophy (disorder)[accessedResource: DOID:4752][accessDate: 04-11-2010]
Multiple System Atrophy Syndrome
Multiple system atrophy (disorder)
Multisystem Atrophy[accessedResource: NIFSTD:birnlex_12573][accessDate: 04-11-2010]
Tomasz Adamusiak
gastric fundus
Fundus gastricus (ventricularis)
FMAID:14559
Fundus of stomach
Jie Zheng
Fundus of stomach[accessedResource: FMAID:14559][accessDate: 04-11-2010]
Fundus gastricus (ventricularis)[accessedResource: FMAID:14559][accessDate: 04-11-2010]
CHEBI:38877
i.v.-Anaesthetika
intravenous anaesthetic
intravenous anesthetics
http://www.ebi.ac.uk/efo/EFO_0001872
James Malone
i.v.-Anaesthetikum
BFTC905
James Malone
Ele Holloway
SJSA1
James Malone
Ele Holloway
CHEBI:9168
http://www.ebi.ac.uk/efo/EFO_0001602
A macrolide that has formula C51H79NO13.
InChIKey=QFJCIRLUMZQUOT-KLHQEZAJBI
Sirolimus
(1R,9S,12S,15R,16E,18R,19R,21R,23S,24E,26E,28E,30S,32S,35R)-1,18-dihydroxy-12-{(2S)-1-[(1S,3R,4R)-4-hydroxy-3-methoxycyclohexyl]propan-2-yl}-19,30-dimethoxy-15,17,21,23,29,35-hexamethyl-11,36-dioxa-4-azatricyclo[30.3.1.0(4,9)]hexatriaconta-16,24,26,28-tetraene-2,3,10,14,20-pentone
InChI=1/C51H79NO13/c1-30-16-12-11-13-17-31(2)42(61-8)28-38-21-19-36(7)51(60,65-38)48(57)49(58)52-23-15-14-18-39(52)50(59)64-43(33(4)26-37-20-22-40(53)44(27-37)62-9)29-41(54)32(3)25-35(6)46(56)47(63-10)45(55)34(5)24-30/h11-13,16-17,25,30,32-34,36-40,42-44,46-47,53,56,60H,14-15,18-24,26-29H2,1-10H3/b13-11+,16-12+,31-17+,35-25+/t30-,32-,33+,34-,36-,37+,38+,39+,40-,42+,43+,44-,46-,47+,51-/m1/s1
James Malone
[H][C@]1(CC[C@@H](O)[C@@H](C1)OC)C[C@H](C)[C@]1([H])CC(=O)[C@H](C)\\C=C(C)\\[C@@H](O)[C@@H](OC)C(=O)[C@H](C)C[C@H](C)\\C=C\\C=C\\C=C(C)\\[C@H](C[C@]2([H])CC[C@@H](C)[C@@](O)(O2)C(=O)C(=O)N2CCCC[C@@]2([H])C(=O)O1)OC
C51H79NO13
rapamycin
Rapamune
Antibiotic AY 22989
NCI-H1355
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158619&type=germplasm
CS57595 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158619&type=germplasm
CS57595
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158625&type=germplasm
CS57601 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158625&type=germplasm
CS57601
James Malone
Met5A
James Malone
Blood plasma is a yellow liquid component of blood, in which the blood cells in whole blood would normally be suspended.
plasma[accessedResource: BTO:0000131][accessDate: 04-11-2010]
BTO:0000131
plasma
blood plasma
James Malone
The fluid portion of the blood in which the particulate components are suspended.
The fluid portion of the blood in which the particulate components are suspended.[accessedResource: BTO:0000131][accessDate: 04-11-2010]
BTO:0000131
H720
James Malone
GM11831
James Malone
cinc
James Malone
http://www.ebi.ac.uk/efo/EFO_0001638
zinc atom
zincum
InChI=1/Zn
CHEBI:27363
A zinc group element that has formula Zn.
[Zn]
30Zn
A zinc group element atom that has formula Zn.
Zink
Zinc
InChIKey=HCHKCACWOHOZIP-UHFFFAOYAS
primordial germ cell
James Malone
Gonocyte
Primitive germ cell
CL:0000670
Primitive germ cell[accessedResource: CL:0000670][accessDate: 04-11-2010]
A primordial germ cell is a diploid germ cell precursors that transiently exist in the embryo before they enter into close association with the somatic cells of the gonad and become irreversibly committed as germ cells.[accessedResource: CL:0000670][accessDate: 04-11-2010]
Gonocyte[accessedResource: CL:0000670][accessDate: 04-11-2010]
A primordial germ cell is a diploid germ cell precursors that transiently exist in the embryo before they enter into close association with the somatic cells of the gonad and become irreversibly committed as germ cells.
troglitazone
Rezulin (TN)
Cc1c(C)c2OC(C)(CCc2c(C)c1O)COc1ccc(CC2SC(=O)NC2=O)cc1
5-{4-[(6-hydroxy-2,5,7,8-tetramethyl-3,4-dihydro-2H-chromen-2-yl)methoxy]benzyl}-1,3-thiazolidine-2,4-dione
A chromane that has formula C24H27NO5S.
C24H27NO5S
5-(4-(6-Hydroxy-2,5,7,8-tetramethylchroman-2-ylmethoxy)benzyl)thiazolidine-2,4-dione
Romglizone
troglitazona
(+-)-all-rac-5-(p-((6-Hydroxy-2,5,7,8-tetramethyl-2-chromanyl)methoxy)benzyl)-2,4-thiazolidinedione
troglitazonum
InChI=1/C24H27NO5S/c1-13-14(2)21-18(15(3)20(13)26)9-10-24(4,30-21)12-29-17-7-5-16(6-8-17)11-19-22(27)25-23(28)31-19/h5-8,19,26H,9-12H2,1-4H3,(H,25,27,28)/f/h25H
http://www.ebi.ac.uk/efo/EFO_0001632
InChIKey=GXPHKUHSUJUWKP-LNNLXFCOCP
James Malone
CHEBI:9753
FMA:242003
Segment of cortex of frontal lobe
Segment of cortex of frontal lobe[accessedResource: FMA:242003][accessDate: 04-11-2010]
orbitofrontal cortex
James Malone
A mating type is a biomaterial factor which describes the type of sexual reproduction through isogamy occur in eukaryotes that undergo.
mating type
James Malone
NCI-H1993
James Malone
Ele Holloway
CO[C@@H](\\C=C\\c1csc(n1)-c1csc(n1)C(C)\\C=C\\C=C\\C(C)C)[C@@H](C)C(\\OC)=C/C(N)=O
http://www.ebi.ac.uk/efo/EFO_0002672
(2E,4R,5S,6E)-3,5-dimethoxy-4-methyl-7-{2'-[(2S,3E,5E)-7-methylocta-3,5-dien-2-yl]-2,4'-bi-1,3-thiazol-4-yl}hepta-2,6-dienamide
InChI=1/C25H33N3O3S2/c1-16(2)9-7-8-10-17(3)24-28-20(15-33-24)25-27-19(14-32-25)11-12-21(30-5)18(4)22(31-6)13-23(26)29/h7-18,21H,1-6H3,(H2,26,29)/b9-7+,10-8+,12-11+,22-13+/t17?,18-,21+/m1/s1/f/h26H2
C25H33N3O3S2
A 2,4'-bi-1,3-thiazole substituted at the 4-position with a (1E,3S,4R,5E)-7-amino-3,5-dimethoxy-4-methyl-7-oxohepta-1,5-dien-1-yl] group and at the 2'-position with a (2S,3E,5E)-7-methylocta-3,5-dien-2-yl group. It is an inhibitor of coenzyme Q - cytochrome c reductase.
InChIKey=XKTFQMCPGMTBMD-WAZGDBOIDY
CHEBI:25461
myxothiazol
FBbt:00005625
embryonic cuprophilic cell
James Malone
MO_798
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#compound_based_treatment[accessedResource: MO_798][accessDate: 04-11-2010]
Tomasz Adamusiak
James Malone
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#compound_based_treatment
A treatment process in which a chemical compound is administered to the subject under investigation.
compound based treatment
The smooth muscle lining the uterus.[accessedResource: NCIt:C12314][accessDate: 04-11-2010]
NCIt:C12314
The smooth muscle lining the uterus.
BTO:0000907
James Malone
The smooth muscle coat of the uterus, which forms the main mass of the organ.[accessedResource: BTO:0000907][accessDate: 04-11-2010]
The smooth muscle coat of the uterus, which forms the main mass of the organ.
myometrium
Folic acid deficiency (disorder)
Folic Acid Deficiencies[accessedResource: MSH:D005494][accessDate: 04-11-2010]
DEFIC FOLIC ACID
Folic acid deficiency
Folic acid deficiency (disorder)[accessedResource: SNOMEDCT:190633005][accessDate: 04-11-2010]
folic acid deficiency[accessedResource: DOID:8453][accessDate: 04-11-2010]
GeneRIF:12666851
GeneRIF:15817609
deficiency of folic acid (disorder)
James Malone
GeneRIF:12144527
SNOMEDCT:190633005
Deficiency of folic acid
MSH:D005494
DOID:8453
DEFIC FOLIC ACID[accessedResource: MSH:D005494][accessDate: 04-11-2010]
A nutritional condition produced by a deficiency of FOLIC ACID in the diet. Many plant and animal tissues contain folic acid, abundant in green leafy vegetables, yeast, liver, and mushrooms but destroyed by long-term cooking. Alcohol interferes with its intermediate metabolism and absorption. Folic acid deficiency may develop in long-term anticonvulsant therapy or with use of oral contraceptives. This deficiency causes anemia, macrocytic anemia, and megaloblastic anemia. It is indistinguishable from vitamin B 12 deficiency in peripheral blood and bone marrow findings, but the neurologic lesions seen in B 12 deficiency do not occur. (Merck Manual, 16th ed)
GeneRIF:16046705
GeneRIF:15068241
GeneRIF:12887734
Deficiency of folic acid[accessedResource: SNOMEDCT:190633005][accessDate: 04-11-2010]
Acid Deficiencies, Folic
folate deficiency
deficiency of folic acid (disorder)[accessedResource: DOID:8453][accessDate: 04-11-2010]
A nutritional condition produced by a deficiency of FOLIC ACID in the diet. Many plant and animal tissues contain folic acid, abundant in green leafy vegetables, yeast, liver, and mushrooms but destroyed by long-term cooking. Alcohol interferes with its intermediate metabolism and absorption. Folic acid deficiency may develop in long-term anticonvulsant therapy or with use of oral contraceptives. This deficiency causes anemia, macrocytic anemia, and megaloblastic anemia. It is indistinguishable from vitamin B 12 deficiency in peripheral blood and bone marrow findings, but the neurologic lesions seen in B 12 deficiency do not occur. (Merck Manual, 16th ed)[accessedResource: MSH:D005494][accessDate: 04-11-2010]
A length unit which is equal to one thousandth of one millionth of a meter or 10^[-9] m.
UO:0000018
nm
A nanometer is a length unit which is equal to 1m x 10^-9.
true
James Malone
nanometer
http://www.ebi.ac.uk/efo/EFO_0001723
nanometre
NCIt:C34184
Gonadal Ridge
Gonadal Ridge[accessedResource: NCIt:C34184][accessDate: 04-11-2010]
embryonic gonadal ridge
James Malone
HCC70
James Malone
The supportive and conductive tissue in plants, consisting of xylem and phloem.
BTO:0001432
vascular tissue
James Malone
MAT:0000362
PO:0009015
The supportive and conductive tissue in plants, consisting of xylem and phloem.[accessedResource: BTO:0001432][accessDate: 04-11-2010]
NCI-H524
James Malone
Ele Holloway
http://jaxmice.jax.org/strain/009321.html
ILSXISS98/TejJ
Tomasz Adamusiak
ILSXISS117/TejJ
Tomasz Adamusiak
Natural Language Generator 8th April 2010
A 22rv1 is a cell line.
A 22rv1 is all of the following: something that is bearer of a prostate carcinoma, something that derives from a homo sapiens, and something that derives from a prostate.
Ele Holloway
James Malone
22Rv1
PC-1
James Malone
Ele Holloway
FBbt:00005616
embryonic foregut sensory structure
James Malone
MO_510
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#computer
http://www.ebi.ac.uk/efo/EFO_0002088
A computer is an instrument which manipulates (stores, retrieves, and processes) data according to a list of instructions.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#computer[accessedResource: MO_510][accessDate: 04-11-2010]
computer
James Malone
FMAID:3832
Tomasz Adamusiak
Second segment of right coronary artery
Posterior segment of right coronary artery
distal portion of right coronary artery
Jie Zheng
Second segment of right coronary artery[accessedResource: FMAID:3832][accessDate: 04-11-2010]
Posterior segment of right coronary artery[accessedResource: FMAID:3832][accessDate: 04-11-2010]
James Malone
HCC1143
estrogen receptor antagonists
http://www.ebi.ac.uk/efo/EFO_0001897
CHEBI:50792
An antagonist at the estrogen receptor.
estrogen receptor antagonist
James Malone
Airflow Obstructions, Chronic
chronic obstructive airways disease NOS[accessedResource: DOID:3083][accessDate: 04-11-2010]
chronic obstructive airways disease NOS (disorder)[accessedResource: DOID:3083][accessDate: 04-11-2010]
GeneRIF:16081882
SNOMEDCT:413846005
Chronic obstructive airway disease[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
A chronic and progressive lung disorder characterized by the loss of elasticity of the bronchial tree and the air sacs, destruction of the air sacs wall, thickening of the bronchial wall, and mucous accumulation in the bronchial tree. The pathologic changes result in the disruption of the air flow in the bronchial airways. Signs and symptoms include shortness of breath, wheezing, productive cough, and chest tightness. The two main types of chronic obstructive pulmonary disease are chronic obstructive bronchitis and emphysema.[accessedResource: NCIt:C3199][accessDate: 04-11-2010]
GeneRIF:14676438
CHRONIC OBSTRUCTIVE AIRWAY DIS
GeneRIF:15718407
GeneRIF:15702235
Chronic airway obstruction
COPD[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
GeneRIF:12921631
Dops[accessedResource: DOID:3083][accessDate: 04-11-2010]
COPD, CHRONIC OBSTRUCTIVE PULMONARY DISEASE[accessedResource: NCIt:C3199][accessDate: 04-11-2010]
GeneRIF:12137602
GeneRIF:10413721
Chronic obstructive pulmonary disease finding[accessedResource: SNOMEDCT:413846005][accessDate: 04-11-2010]
GeneRIF:15596681
GeneRIF:11829455
Dops
Chronic irreversible airway obstruction[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
CAFL - Chronic airflow limitation
SNOMEDCT:13645005
GeneRIF:12816735
DISEASE (COPD), CHRONIC OBSTRUCTIVE
chronic obstructive lung disease (disorder)[accessedResource: DOID:3083][accessDate: 04-11-2010]
CHRONIC OBSTRUCTIVE PULM DIS
Chronic obstructive pulmonary disease NOS[accessedResource: SNOMEDCT:196003006][accessDate: 04-11-2010]
chronic obstructive lung disease [Ambiguous][accessedResource: DOID:3083][accessDate: 04-11-2010]
Chronic obstructive pulmonary disease NOS
GeneRIF:12853070
Chronic Airflow Obstruction[accessedResource: MSH:D029424][accessDate: 04-11-2010]
Chronic irreversible airway obstruction
GeneRIF:15795697
Chronic obstructive lung disease, NOS[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
NCIt:C3199
GeneRIF:12884528
COAD - Chronic obstructive airways disease
COLD - Chronic obstructive lung disease
CHRONIC OBSTRUCTIVE PULM DIS[accessedResource: MSH:D029424][accessDate: 04-11-2010]
Chronic airway disease
Chronic Obstructive Airways Disease
James Malone
chronic obstructive pulmonary disease
COPD
CAO - Chronic airflow obstruction
GeneRIF:14718422
A disease of chronic diffuse irreversible airflow obstruction. Subcategories of COPD include CHRONIC BRONCHITIS and PULMONARY EMPHYSEMA.
MSH:D029424
chronic obstructive pulmonary disease and allied conditions
chronic obstructive lung disease [Ambiguous]
CAO - Chronic airflow obstruction[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
GeneRIF:12838617
chronic obstructive lung disease[accessedResource: DOID:3083][accessDate: 04-11-2010]
COAD
A group of disorders affecting the bronchi and the lung parenchyma. It is characterized by chronic and irreversible obstruction of the airflow. It includes chronic bronchitis and pulmonary emphysema.
chronic airway obstruction, not elsewhere classified[accessedResource: DOID:3083][accessDate: 04-11-2010]
GeneRIF:15039137
GeneRIF:11953106
A chronic and progressive lung disorder characterized by the loss of elasticity of the bronchial tree and the air sacs, destruction of the air sacs wall, thickening of the bronchial wall, and mucous accumulation in the bronchial tree. The pathologic changes result in the disruption of the air flow in the bronchial airways. Signs and symptoms include shortness of breath, wheezing, productive cough, and chest tightness. The two main types of chronic obstructive pulmonary disease are chronic obstructive bronchitis and emphysema.
chronic airway obstruction, NEC in ICD9CM_2006
Chronic obstructive lung disease, NOS
COAD - Chronic obstructive airways disease[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
GeneRIF:15843147
GeneRIF:12016104
chronic obstructive airways disease NOS
GeneRIF:15994391
Chronic airway obstruction[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
GeneRIF:11667971
CHRONIC OBSTRUCTIVE PULMONARY DISEASE, (COPD)
GeneRIF:15038404
CAL - Chronic airflow limitation
GeneRIF:14530202
Airflow Obstruction, Chronic
chronic obstructive airway disease
GeneRIF:12761563
chronic obstructive pulmonary disease and allied conditions[accessedResource: DOID:3083][accessDate: 04-11-2010]
Chronic Airflow Obstructions[accessedResource: MSH:D029424][accessDate: 04-11-2010]
CHRONIC OBSTRUCTIVE LUNG DIS[accessedResource: MSH:D029424][accessDate: 04-11-2010]
chronic obstructive airways disease NOS (disorder)
GeneRIF:16236890
COPD NOS[accessedResource: DOID:3083][accessDate: 04-11-2010]
Chronic airway disease[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
GeneRIF:15820782
Chronic Obstructive Airways Disease[accessedResource: NCIt:C3199][accessDate: 04-11-2010]
GeneRIF:15723202
chronic airway obstruction, not elsewhere classified
Chronic obstructive lung disease, NEC
GeneRIF:12838770
Chronic Obstructive Lung Disease
chronic airway obstruction, NEC in ICD9CM_2006[accessedResource: DOID:3083][accessDate: 04-11-2010]
COPD NOS
A disease of chronic diffuse irreversible airflow obstruction. Subcategories of COPD include CHRONIC BRONCHITIS and PULMONARY EMPHYSEMA.[accessedResource: MSH:D029424][accessDate: 04-11-2010]
COLD
GeneRIF:11757623
chronic obstructive lung disease (disorder)
Chronic obstructive pulmonary disease finding (finding)
DOID:3083
GeneRIF:16126934
CHRONIC OBSTRUCTIVE AIRWAY DIS[accessedResource: MSH:D029424][accessDate: 04-11-2010]
GeneRIF:14985398
COAD[accessedResource: MSH:D029424][accessDate: 04-11-2010]
Chronic airflow limitation
CHRONIC OBSTRUCTIVE LUNG DIS
COLD[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
DISEASE (COPD), CHRONIC OBSTRUCTIVE[accessedResource: NCIt:C3199][accessDate: 04-11-2010]
GeneRIF:12172904
GeneRIF:16166745
GeneRIF:15766560
CAFL - Chronic airflow limitation[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
GeneRIF:16002569
GeneRIF:14720432
GeneRIF:12861851
Chronic obstructive pulmonary disease finding
SNOMEDCT:196003006
Chronic obstructive pulmonary disease finding (finding)[accessedResource: SNOMEDCT:413846005][accessDate: 04-11-2010]
Chronic airflow limitation[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
GeneRIF:15175276
COLD - Chronic obstructive lung disease[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
Chronic obstructive lung disease, NEC[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
CAL - Chronic airflow limitation[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
A vessel that contains or conveys lymph, that originates as an interfibrillar or intercellular cleft or space in a tissue or organ, and that if small has no distinct walls or walls composed only of endothelial cells and if large resembles a vein in structure.
lymph vessel
A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep.[accessedResource: TAO:0005105][accessDate: 04-11-2010]
TAO:0005105
MAT:0000443
BTO:0000752
Lymphatic vessel[accessedResource: FMAID:30315][accessDate: 04-11-2010]
lymphatic vessel
A vessel that contains or conveys lymph, that originates as an interfibrillar or intercellular cleft or space in a tissue or organ, and that if small has no distinct walls or walls composed only of endothelial cells and if large resembles a vein in structure.[accessedResource: BTO:0000752][accessDate: 04-11-2010]
A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep.
MA:0000138
James Malone
Segment of lymphatic tree organ, the wall and lumen of which are continuous with those of the veins, directly or indirectly; together with other lymphatic vessels and lymph nodes, it constitutes the lymphatic tree organ. Examples: bronchomediastinal lymph duct, thoracic duct.
XAO:0000375
FMAID:30315
Jie Zheng
A hematopoietic stem cell that resides in the fetal liver. In mice, this cell type is first observed at E10.5. This cell type is MHC-positive, HSA-positive, AA4.1-positive, CD45-positive, Sca-1 positive, CD150-positive, CD48-negative and CD244-negative.[accessedResource: CL:0002353][accessDate: 04-11-2010]
CL:0002353
Tomasz Adamusiak
A hematopoietic stem cell that resides in the fetal liver. In mice, this cell type is first observed at E10.5. This cell type is MHC-positive, HSA-positive, AA4.1-positive, CD45-positive, Sca-1 positive, CD150-positive, CD48-negative and CD244-negative.
fetal liver hematopoietic progenitor cell
similar to CL:0000837, but in fetal liver
Kasumi2
James Malone
Ele Holloway
square meter
James Malone
A square meter is an area unit which is equal to an area enclosed by a square with sides each 1 meter long.
m^[2]
An area unit which is equal to an area enclosed by a square with sides each 1 meter long.
UO:0000080
true
square metre
http://www.ebi.ac.uk/efo/EFO_0001694
HP:0001643
FMA:79871
ductus Botalli
ductus arteriosus
James Malone
Ele Holloway
BTO:0001325
ganglion cervicale superius
The uppermost ganglion on the sympathetic trunk, lying behind the internal carotid artery and in front of the second and third cervical vertebrae; it gives rise to postganglionic fibers to the heart via cervical cardiac nerves, to the pharyngeal plexus and thence to the larynx and pharynx, and to the head via the external and internal carotid plexuses.
ganglion cervicale superius[accessedResource: BTO:0001325][accessDate: 04-11-2010]
The uppermost ganglion on the sympathetic trunk, lying behind the internal carotid artery and in front of the second and third cervical vertebrae; it gives rise to postganglionic fibers to the heart via cervical cardiac nerves, to the pharyngeal plexus and thence to the larynx and pharynx, and to the head via the external and internal carotid plexuses.[accessedResource: BTO:0001325][accessDate: 04-11-2010]
superior cervical ganglion
James Malone
An assay in which the transcriptome of a biological sample is analysed by Massively Parallel Signature Sequencing (MPSS)
transcription profiling by MPSS
Anna Farne
ZFS:0000020
gastrula 75%-epiboly
James Malone
MCC:0000500
mIMCD3
mIMCD-3
James Malone
Ele Holloway
United States Patent 20040023256
An assay in which surface-bound, translationally competent ribosome complexes are used to generate a translation profile for mRNA, which mRNA may be a single molecular species, or a combination of species, including complex mixtures such as those found in the set of mRNAs isolated from a cell or tissue. One or more components of the surface-bound ribosome complex may be labeled at specific positions to permit analysis of multiple or single molecules for determination of ribosomal conformational changes and translation kinetics. Translation profiles are used as the basis for comparison of an mRNA or set of mRNA species. The translation profile can be used to determine such characteristics as kinetics of initiation, kinetic of elongation, identity of the polypeptide product, and the like. Analysis of translation profiles may be used to determine differential gene expression, optimization of mRNA sequences for expression, screening drug candidates for an effect on translation.
translation profiling
James Malone
gastric cancer
ICD9:230.2
DOID:9138
gastric carcinoma
Carcinoma in situ of stomach[accessedResource: ICD9:230.2][accessDate: 04-11-2010]
carcinoma in situ of stomach (disorder)[accessedResource: DOID:9138][accessDate: 04-11-2010]
James Malone
CA IN SITU STOMACH[accessedResource: ICD9:230.2][accessDate: 04-11-2010]
carcinoma in situ of stomach (disorder)
carcinoma in situ of stomach NOS (disorder)[accessedResource: DOID:9138][accessDate: 04-11-2010]
gastric carcinoma in situ[accessedResource: DOID:9138][accessDate: 04-11-2010]
CA IN SITU STOMACH
gastric carcinoma in situ
carcinoma in situ of stomach NOS (disorder)
Carcinoma in situ of stomach
MO_220
haploid, diploid, triploid
The number of single sets of chromosomes in the cell or an organism e.g., haploid, diploid, triploid, etc.
ploidy
Tomasz Adamusiak
Jie Zheng
James Malone
James Malone
colon sigmoideum
sigmoid colon
BTO:0000645
MAT:0000314
FMAID:14548
sigmoid flexure
colon sigmoideum[accessedResource: BTO:0000645][accessDate: 04-11-2010]
sigmoid flexure[accessedResource: BTO:0000645][accessDate: 04-11-2010]
pelvic colon[accessedResource: BTO:0000645][accessDate: 04-11-2010]
pelvic colon
The S-shaped part of the colon which lies in the pelvis, extending from the pelvic brim to the third segment of the sacrum, and continuous above with the descending (or iliac) colon and below with the rectum.[accessedResource: BTO:0000645][accessDate: 04-11-2010]
The S-shaped part of the colon which lies in the pelvis, extending from the pelvic brim to the third segment of the sacrum, and continuous above with the descending (or iliac) colon and below with the rectum.
GM12763
James Malone
4-(1-hydroxy-1-methylethyl)-2-propyl-1-{[2'-(1H-tetrazol-5-yl)[1,1'-biphenyl]-4-yl]methyl}-1H-imidazole-5-carboxylic acid
InChIKey=VTRAEEWXHOVJFV-NEQLIHFBCB
4-(hydroxy-1-methylethyl)-2-propyl-1-{[2'-(1H-tetrazol-5-yl)-1,1'-biphenyl-4-yl]methyl}-1H-imidazole-5-carboxylic acid
InChI=1/C24H26N6O3/c1-4-7-19-25-21(24(2,3)33)20(23(31)32)30(19)14-15-10-12-16(13-11-15)17-8-5-6-9-18(17)22-26-28-29-27-22/h5-6,8-13,33H,4,7,14H2,1-3H3,(H,31,32)(H,26,27,28,29)/f/h26,31H
C24H26N6O3
http://www.ebi.ac.uk/efo/EFO_0001587
olmesartan
CCCc1nc(c(C(O)=O)n1Cc1ccc(cc1)-c1ccccc1-c1nnn[nH]1)C(C)(C)O
CHEBI:48416
A biphenylyltetrazole that has formula C24H26N6O3.
4-(1-hydroxy-1-methylethyl)-2-propyl-1-{[2'-(1H-tetrazol-5-yl)biphenyl-4-yl]methyl}-1H-imidazole-5-carboxylic acid
HEK293T
James Malone
NCI-H720
James Malone
Ele Holloway
GM12249
James Malone
SNU182
James Malone
Ele Holloway
http://en.wikipedia.org/wiki/Han_Chinese
Han Chinese
Tomasz Adamusiak
Han Chinese
http://www.arabidopsis.org/servlets/TairObject?id=1005158883&type=germplasm
CS57859 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158883&type=germplasm
CS57859
James Malone
NT-1
James Malone
Ele Holloway
A highly potent opiate analgesic psychoactive drug, morphine acts directly on the central nervous system (CNS) to relieve pain. Morphine has a high potential for addiction; tolerance and both physical and psychological dependence develop rapidly.
InChIKey=BQJCRHHNABKAKU-KBQPJGBKBH
(5R,6S,9R,13S,14R)-4,5-epoxy-N-methyl-7-morphinen-3,6-diol
(7R,7AS,12BS)-3-METHYL-2,3,4,4A,7,7A-HEXAHYDRO-1H-4,12-METHANO[1]BENZOFURO[3,2-E]ISOQUINOLINE-7,9-DIOL
InChI=1/C17H19NO3/c1-18-7-6-17-10-3-5-13(20)16(17)21-15-12(19)4-2-9(14(15)17)8-11(10)18/h2-5,10-11,13,16,19-20H,6-8H2,1H3/t10-,11+,13-,16-,17-/m0/s1
morphium
morphine
James Malone
17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol
morfina
CHEBI:17303
(5alpha,6alpha)-didehydro-4,5-epoxy-17-methylmorphinan-3,6-diol
Ele Holloway
(5alpha,6alpha)-17-methyl-7,8-didehydro-4,5-epoxymorphinan-3,6-diol
Morphin
C17H19NO3
http://www.ebi.ac.uk/efo/EFO_0002414
morphinum
A morphinane alkaloid that has formula C17H19NO3.
[H][C@]12C=C[C@H](O)[C@@H]3Oc4c(O)ccc5C[C@H]1N(C)CC[C@@]23c45
Morphia
interferon beta
Tomasz Adamusiak
MA:0000395
Puboperineal region[accessedResource: FMAID:20462][accessDate: 04-11-2010]
Female pudendum
Puboperineal region
EV:0100118
vulva
The external female genital organs, including the clitoris, vaginal lips, and the opening to the vagina.
BTO:0001055
MAT:0000169
James Malone
FBbt:00004926
Female pudendum[accessedResource: FMAID:20462][accessDate: 04-11-2010]
FMAID:20462
WBbt:0006748
The external female genital organs, including the clitoris, vaginal lips, and the opening to the vagina.[accessedResource: BTO:0001055][accessDate: 04-11-2010]
A volume unit which is equal to one thousandth of one millionth of a liter or 10^[-9] L.
A nanoliter is a volume unit which is equal to one thousandth of one millionth of a liter or 10^-9 L.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#nl
nl
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#nl[accessedResource: MO_754][accessDate: 04-11-2010]
MO_754
Tomasz Adamusiak
James Malone
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001704
nanoliter
true
ITM-ST
James Malone
Ele Holloway
cartilage cell[accessedResource: CL:0000138][accessDate: 04-11-2010]
CL:0000138
cartilage cell
Polymorphic cell that form cartilage.
James Malone
chondrocyte
Polymorphic cell that form cartilage.[accessedResource: CL:0000138][accessDate: 04-11-2010]
angiotensin-converting enzyme inhibitor
ACE inhibitor
http://www.ebi.ac.uk/efo/EFO_0001836
CHEBI:35457
angiotensin-converting enzyme inhibito
James Malone
osteoma
Tomasz Adamusiak
James Malone
NCIt:C43869
Denotes the inhabitants of Iran, a person from there, or their descendants elsewhere.
Denotes the inhabitants of Iran, a person from there, or their descendants elsewhere.[accessedResource: NCIt:C43869][accessDate: 04-11-2010]
Iranian
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hermaphrodite[accessedResource: MO_356][accessDate: 04-11-2010]
PATO:0001340
MO_356
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hermaphrodite
James Malone
hermaphrodite
NCIt:C45909
A biological sex quality inhering in an organism or a population with both male and female sexual organs in one individual.[accessedResource: PATO:0001340][accessDate: 04-11-2010]
A biological sex quality inhering in an organism or a population with both male and female sexual organs in one individual.
intersex
intersex[accessedResource: PATO:0001340][accessDate: 04-11-2010]
Hermaphroditism
Tomasz Adamusiak
An organism having both male and female sexual characteristics and organs.
An organism having both male and female sexual characteristics and organs.[accessedResource: NCIt:C45909][accessDate: 04-11-2010]
Jie Zheng
Hermaphroditism[accessedResource: NCIt:C45909][accessDate: 04-11-2010]
thyrocyte
thyroid epithelial cell
thyroid follicular cell[accessedResource: BTO:0003736][accessDate: 04-11-2010]
An epithelial cell lining the thyroid follicle.
thyroid epithelial cell[accessedResource: BTO:0003736][accessDate: 04-11-2010]
BTO:0003736
thyroid follicular cell
Tomasz Adamusiak
An epithelial cell lining the thyroid follicle.[accessedResource: BTO:0003736][accessDate: 04-11-2010]
A viral disorder characterized by high FEVER, dry COUGH, shortness of breath (DYSPNEA) or breathing difficulties, and atypical PNEUMONIA. A virus in the genus CORONAVIRUS is the suspected agent.
GeneRIF:15243926
GeneRIF:12969506
GeneRIF:15187168
James Malone
SARS-CoV infection[accessedResource: DOID:2945][accessDate: 04-11-2010]
SARS
GeneRIF:15569689
GeneRIF:15749762
GeneRIF:15958670
GeneRIF:15788388
GeneRIF:15452265
SARS ASSOC CORONAVIRUS[accessedResource: ICD9:079.82][accessDate: 04-11-2010]
A respiratory system infectious disease that is a severe respiratory illness characterized by fever, headache, body aches, a dry cough, and hypoxia and pneumonia caused by a single-stranded RNA virus of the genus SARS coronavirus (SARS-CoV).
GeneRIF:16195357
GeneRIF:15326590
GeneRIF:15766558
GeneRIF:14647384
SARS-associated coronavirus[accessedResource: DOID:2945][accessDate: 04-11-2010]
GeneRIF:16299304
SARS ASSOC CORONAVIRUS
SARS-CoV infection
GeneRIF:15731040
ICD9:079.82
MSH:D045169
GeneRIF:15518555
SNOMEDCT:398447004
GeneRIF:15345712
SARS-associated coronavirus
GeneRIF:15306699
A respiratory system infectious disease that is a severe respiratory illness characterized by fever, headache, body aches, a dry cough, and hypoxia and pneumonia caused by a single-stranded RNA virus of the genus SARS coronavirus (SARS-CoV).[accessedResource: DOID:2945][accessDate: 04-11-2010]
GeneRIF:15522242
GeneRIF:15992957
A viral disorder characterized by high FEVER, dry COUGH, shortness of breath (DYSPNEA) or breathing difficulties, and atypical PNEUMONIA. A virus in the genus CORONAVIRUS is the suspected agent.[accessedResource: MSH:D045169][accessDate: 04-11-2010]
Severe acute respiratory syndrome (disorder)
GeneRIF:15381116
GeneRIF:15840526
SARS[accessedResource: SNOMEDCT:398447004][accessDate: 04-11-2010]
Severe acute respiratory syndrome is a respiratory tract infection described as a severe respiratory illness that is transmitted especially by contact with infectious material (as respiratory droplets or body fluids), is caused by a single-stranded RNA virus of the genus Coronavirus (SARS-CoV), is characterized by fever, headache, body aches, a dry cough, and hypoxia and usually by pneumonia.
Severe acute respiratory syndrome (disorder)[accessedResource: SNOMEDCT:398447004][accessDate: 04-11-2010]
severe acute respiratory syndrome
DOID:2945
H2882
NCI-H2882
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158580&type=germplasm
CS57556 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158580&type=germplasm
CS57556
James Malone
Count, Low Sperm
James Malone
GeneRIF:15064832
GeneRIF:15379971
Low Sperm Counts
MSH:D009845
A condition of suboptimal concentration of SPERMATOZOA in the ejaculated SEMEN to ensure successful FERTILIZATION of an OVUM. In humans, oligospermia is defined as a sperm count below 20 million per milliliter semen.[accessedResource: MSH:D009845][accessDate: 04-11-2010]
Oligospermia
GeneRIF:15044259
GeneRIF:12634316
DOID:14227
GeneRIF:12399529
Azoospermia (finding)[accessedResource: DOID:14227][accessDate: 04-11-2010]
GeneRIF:16123080
Oligozoospermia[accessedResource: MSH:D009845][accessDate: 04-11-2010]
Low Sperm Count[accessedResource: MSH:D009845][accessDate: 04-11-2010]
GeneRIF:11499325
GeneRIF:16275267
GeneRIF:15253135
Oligozoospermia
Oligospermia[accessedResource: MSH:D009845][accessDate: 04-11-2010]
azoospermia
GeneRIF:12366783
Azoospermia (finding)
A condition of suboptimal concentration of SPERMATOZOA in the ejaculated SEMEN to ensure successful FERTILIZATION of an OVUM. In humans, oligospermia is defined as a sperm count below 20 million per milliliter semen.
GeneRIF:12161499
GeneRIF:11869379
GeneRIF:12399527
ICD9:606.0
GeneRIF:16213863
Sperm Counts, Low[accessedResource: MSH:D009845][accessDate: 04-11-2010]
GeneRIF:15220464
NCI Metathesaurus: C1406910
acute quadriplegic myopathy
James Malone
ZFS:0000043
juvenile days 45-89
James Malone
MFO:0002260
The anterior of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain that includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and that especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions.[accessedResource: BTO:0000478][accessDate: 04-11-2010]
NIFSTD:birnlex_1509
The most anterior region the brain including both the telencephalon and diencephalon. Kimmel et al, 1995.[accessedResource: TAO:0000109][accessDate: 04-11-2010]
The most anterior region the brain including both the telencephalon and diencephalon.[accessedResource: ZFA:0000109][accessDate: 04-11-2010]
TAO:0000109
James Malone
The most anterior region the brain including both the telencephalon and diencephalon.
XAO:0000011
prosencephalon[accessedResource: MAT:0000105][accessDate: 04-11-2010]
EMAPA:16895
Organ component of neuraxis that has as its parts the telencephalon, diencephalon, lateral ventricles and third ventricle. Examples: There is only one forebrain.
ZFA:0000109
MA:0000170
Tomasz Adamusiak
forebrain
SAEL:43
The most anterior region the brain including both the telencephalon and diencephalon. Kimmel et al, 1995.
FMAID:61992
The anterior of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain that includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and that especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions.
prosencephalon
EHDAA:3470
MAT:0000105
BTO:0000478
GM12239
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158620&type=germplasm
CS57596 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158620&type=germplasm
CS57596
James Malone
Use PATO qualities , e.g. dead
true
The stage premortem or postmortem at which the sample was processed for extraction of biomaterials. e.g. alive or dead
obsolete_organism status
http://www.arabidopsis.org/servlets/TairObject?id=1005158932&type=germplasm
CS57908 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158932&type=germplasm
CS57908
James Malone
Hispanic
Spanish Origin[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
A person of Mexican, Puerto Rican, Cuban, Central or South American or other Spanish culture or origin, regardless of race. An arbitrary ethnic classification.[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Latino Population
Tomasz Adamusiak
A person of Mexican, Puerto Rican, Cuban, Central or South American or other Spanish culture or origin, regardless of race. An arbitrary ethnic classification.
Spanish Origin
Hispanic or Latino
Hispanics or Latinos[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Latino
Hispanic Populations[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
NCIt:C17459
Latino Population[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Hispanic Populations
Hispanics or Latinos
Hispanic or Latino[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Hispanic[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
James Malone
1A2
Ele Holloway
http://jaxmice.jax.org/strain/009273.html
ILSXISS52/TejJ
Tomasz Adamusiak
http://jaxmice.jax.org/strain/009282.html
ILSXISS90/TejJ
Tomasz Adamusiak
GeneRIF:15232358
Spastic colon
Irritable colon - Irritable bowel syndrome[accessedResource: DOID:9778][accessDate: 04-11-2010]
James Malone
GeneRIF:11877320
Adaptive colitis
Irritable Bowel Syndromes[accessedResource: MSH:D043183][accessDate: 04-11-2010]
Colon spasm[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Irritable colon (disorder)
Irritable bowel - IBS
Colitis, Mucous
Irritable colon (disorder)[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Colitides, Mucous
Colitis, Mucous[accessedResource: MSH:D043183][accessDate: 04-11-2010]
GeneRIF:15509739
GeneRIF:15188158
A disorder with chronic or recurrent colonic symptoms without a clearcut etiology. This condition is characterized by chronic or recurrent ABDOMINAL PAIN, bloating, MUCUS in FECES, and an erratic disturbance of DEFECATION.
IBS - Irritable bowel syndrome[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Psychogenic IBS[accessedResource: DOID:9778][accessDate: 04-11-2010]
irritable bowel syndrome
Spastic colon[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Membranous colitis
Syndromes, Irritable Bowel
DOID:9778
Adaptive colitis[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Irritable colon syndrome
IBS
Membranous colitis[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Irritable bowel - IBS[accessedResource: DOID:9778][accessDate: 04-11-2010]
[X]Psychogenic IBS[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
[X]Psychogenic IBS
Irritable Colon[accessedResource: MSH:D043183][accessDate: 04-11-2010]
IBD
IBS - Irritable bowel syndrome
IBS[accessedResource: DOID:9778][accessDate: 04-11-2010]
ICD9:564.1
Irritable Colon
Spastic colitis[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Functional bowel disease
Nervous colitis[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Mucous Colitides[accessedResource: MSH:D043183][accessDate: 04-11-2010]
Psychogenic IBS
Irritable colon syndrome[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
IC - Irritable colon[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Nervous colitis
A disorder with chronic or recurrent colonic symptoms without a clearcut etiology. This condition is characterized by chronic or recurrent ABDOMINAL PAIN, bloating, MUCUS in FECES, and an erratic disturbance of DEFECATION.[accessedResource: MSH:D043183][accessDate: 04-11-2010]
IC - Irritable colon
Irritable bowel[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Functional bowel disease[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
SNOMEDCT:10743008
GeneRIF:15633223
Irritable bowel
Irritable colon - Irritable bowel syndrome
MSH:D043183
Spastic colitis
Colon spasm
IBD[accessedResource: DOID:9778][accessDate: 04-11-2010]
A neoplastic proliferation of the epithelial cells that line the acini and the ducts of the prostate gland. The neoplastic epithelial cells are confined within the acini and the ducts and they do not invade the surrounding prostatic stroma. Morphologically, it is classified as low or high grade.[accessedResource: NCIt:C4064][accessDate: 04-11-2010]
prostatic intraepithelial neoplasia
PIN - Prostatic Intraepithelial Neoplasia
MP:0009219
NCIt:C4064
prostate intraepithelial neoplasia
PIN[accessedResource: NCIt:C4064][accessDate: 04-11-2010]
Prostatic Intraepithelial Neoplasia[accessedResource: NCIt:C4064][accessDate: 04-11-2010]
PIN
Ele Holloway
noninvasive prostate duct lesions that affect smaller caliber ducts
A neoplastic proliferation of the epithelial cells that line the acini and the ducts of the prostate gland. The neoplastic epithelial cells are confined within the acini and the ducts and they do not invade the surrounding prostatic stroma. Morphologically, it is classified as low or high grade.
noninvasive prostate duct lesions that affect smaller caliber ducts[accessedResource: MP:0009219][accessDate: 04-11-2010]
PIN - Prostatic Intraepithelial Neoplasia[accessedResource: NCIt:C4064][accessDate: 04-11-2010]
Tomasz Adamusiak
GM11882
James Malone
NCI Metathesaurus: C0085491
Aeromonas hydrophila infection is a bacterial disease caused by infection from the Aeromonas hydrophila bacteria.
Aeromonas hydrophila infection
James Malone
tegmen[accessedResource: BTO:0001227][accessDate: 04-11-2010]
PO:0009088
GRO:0005359
MAT:0000228
GRO:0005359[accessedResource: BTO:0001227][accessDate: 04-11-2010]
The outer layer of a seed that is developed from the integuments of the ovule; the testa.
testa
BTO:0001227
The outer layer of a seed that is developed from the integuments of the ovule; the testa.[accessedResource: BTO:0001227][accessDate: 04-11-2010]
James Malone
seed coat
tegmen
testa[accessedResource: BTO:0001227][accessDate: 04-11-2010]
true
ug/ml
microgram per milliliter
CHEBI:28368
http://www.ebi.ac.uk/efo/EFO_0001583
novobiocin
green plants
http://www.ebi.ac.uk/efo/EFO_0002633
Viridiplantae are a clade comprising the green algae and land plants.
Viridiplantae
James Malone
true
UO:0000045
http://www.ebi.ac.uk/efo/EFO_0001677
A unit which is one of a particular measure to which all measures of that type can be related.
A base unit is a unit which is used to measure a paticular type which is independent from all other base units and from which all measures of that type can be derived, for example, a length base unit of the meter. This is akin to the SI base unit system.
base unit
James Malone
SNOMEDCT:408647009
Stomach Adenocarcinoma[accessedResource: NCIt:C4004][accessDate: 04-11-2010]
An adenocarcinoma arising from the stomach glandular epithelium. Gastric adenocarcinoma is primarily a disease of older individuals, most commonly develops after a long period of atrophic gastritis and is strongly associated with Helicobacter Pylori infection. The lack of early symptoms often delays the diagnosis of gastric cancer. The majority of patients present with advanced tumors which have poor rates of curability. Microscopically, two important histologic types of gastric adenocarcinoma are recognized: the intestinal and diffuse type. The overall prognosis of gastric adenocarcinomas is poor, even in patients who receive a "curative" resection (adapted from Sternberg's Surgical Pathology, 3rd ed., 1999).
Adenocarcinoma of Stomach[accessedResource: NCIt:C4004][accessDate: 04-11-2010]
curative
NCIt:C4004
Adenocarcinoma of the Stomach
Adenocarcinoma of the Stomach[accessedResource: NCIt:C4004][accessDate: 04-11-2010]
Stomach Adenocarcinoma
An adenocarcinoma arising from the stomach glandular epithelium. Gastric adenocarcinoma is primarily a disease of older individuals, most commonly develops after a long period of atrophic gastritis and is strongly associated with Helicobacter Pylori infection. The lack of early symptoms often delays the diagnosis of gastric cancer. The majority of patients present with advanced tumors which have poor rates of curability. Microscopically, two important histologic types of gastric adenocarcinoma are recognized: the intestinal and diffuse type. The overall prognosis of gastric adenocarcinomas is poor, even in patients who receive a "curative" resection (adapted from Sternberg's Surgical Pathology, 3rd ed., 1999).[accessedResource: NCIt:C4004][accessDate: 04-11-2010]
Adenocarcinoma of stomach (disorder)[accessedResource: SNOMEDCT:408647009][accessDate: 04-11-2010]
adenocarcinoma of stomach (disorder)
gastric adenocarcinoma
DOID:3717
James Malone
Adenocarcinoma of Stomach
http://en.wikipedia.org/wiki/Brassica_oleracea
http://www.ebi.ac.uk/efo/EFO_0002635
Brassica oleracea, commonly called Wild Mustard, is a species of Brassica native to coastal southern and western Europe, where its tolerance of salt and lime and its intolerance of competition from other plants typically restrict its natural occurrence to limestone sea cliffs, like the chalk cliffs on both sides of the English Channel.
Brassica oleracea
James Malone
GM12056
James Malone
HMT3522S1
James Malone
FBbt:00000210
Asn/A antEndo
Asn/A antEndo[accessedResource: FBbt:00000210][accessDate: 04-11-2010]
anterior endoderm anlage
James Malone
HCC515
James Malone
H1334
NCI-H1334
James Malone
HP:0001952
abnormal glucose tolerance
Tomasz Adamusiak
Jie Zheng
MAT:0000490
medial meniscus
Medial is a geometric modifier describing something which is pertaining to, in or toward the middle, for example medial meniscus.
medial
James Malone
SKGT4
James Malone
SUDHL16
James Malone
Ele Holloway
A human embryonal carcinoma (EC) stem cell line used as a model system for the study of neuronal differentiation
NTera2
YCC10
James Malone
Ele Holloway
time before disease progression
James Malone
LK-2
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158827&type=germplasm
CS57803 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158827&type=germplasm
CS57803
James Malone
developmental stage
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#developmental_stage[accessedResource: MO_878][accessDate: 04-11-2010]
puberty
Jie Zheng
A developmental stage is an information entity about some identifiable period in an organism's life cycle e.g. puberty
Tomasz Adamusiak
James Malone
true
MO_878
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#developmental_stage
TERV-ST
James Malone
FBbt:00005606
embryonic foregut
James Malone
TimeUnitOther
time unit
A base unit which is a standard measure of the dimension in which events occur in sequence.
Tomasz Adamusiak
TimeUnitOther[accessedResource: MO_103][accessDate: 04-11-2010]
MO_103
MO_166
James Malone
http://www.ebi.ac.uk/efo/EFO_0001680
Jie Zheng
A time unit is a base unit which is a standard measure of the dimension in which events occur in sequence.
true
1.8
true
obsolete_MDAMB-157
James Malone
duplicate of EFO_0001206
MO_882
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#submitter
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#submitter[accessedResource: MO_882][accessDate: 04-11-2010]
submitter
Tomasz Adamusiak
Parietal region
EV:0100166
MAT:0000506
Parietal lobe is the one of five lobes of the cerebral hemisphere which occupies the dorsal-posterior portion of the hemisphere. It is bounded by the central sulcus on its anterior border and and by the longitudinal cerebral fissure on its medial border. Posteriorly it shares an arbitrary border with the occipital lobe.
parietal cortex
parietal cortex[accessedResource: BTO:0001001][accessDate: 04-11-2010]
BTO:0001001
FMAID:61826
James Malone
The upper central lobe of the cerebral hemisphere, separated from the temporal lobe below by the lateral sulcus, but continuous at the posterior end of that sulcus, and separated from the frontal lobe by the central sulcus. Behind, it is continuous with the occipital lobe on the lateral surface, but separated from it by the parietooccipital sulcus on the medial surface.
The upper central lobe of the cerebral hemisphere, separated from the temporal lobe below by the lateral sulcus, but continuous at the posterior end of that sulcus, and separated from the frontal lobe by the central sulcus. Behind, it is continuous with the occipital lobe on the lateral surface, but separated from it by the parietooccipital sulcus on the medial surface.[accessedResource: BTO:0001001][accessDate: 04-11-2010]
parietal lobe
http://www.ebi.ac.uk/efo/EFO_0001821
CHEBI:23530
cytokinins
James Malone
http://jaxmice.jax.org/strain/009286.html
ILSXISS99/TejJ
Tomasz Adamusiak
T24
James Malone
Ele Holloway
A cord arising from the navel that connects the fetus with the placenta; also: yolk stalk
connecting stalk
EVM:2000364
EV:0100127
connecting stalk[accessedResource: MAT:0000280][accessDate: 04-11-2010]
FMAID:85541
James Malone
EHDAA:158
MAT:0000280
A cord arising from the navel that connects the fetus with the placenta; also: yolk stalk[accessedResource: BTO:0001415][accessDate: 04-11-2010]
EV:3000467
SAEL:113
BTO:0001415
umbilical cord
Made obsolete: considered as synonym to invasive ductal carcinoma
true
obsolete_infiltrating ductal carcinoma
Tomasz Adamusiak
protein
polypeptide
MO_683
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#protein[accessedResource: MO_683][accessDate: 04-11-2010]
Jie Zheng
proteins
http://www.ebi.ac.uk/efo/EFO_0001459
A biological macromolecule minimally consisting of one polypeptide chain synthesized at the ribosome.
A protein is an (also known as polypeptides) organic compound made of amino acids arranged in a linear chain and folded into a globular form.
PRO:000000001
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#protein
James Malone
NCIt:C34943
Pre-eclampsia (disorder)
GeneRIF:12593997
Toxemia of pregnancy (disorder)[accessedResource: DOID:10591][accessDate: 04-11-2010]
Proteinuric hypertension of pregnancy[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
Toxemia of Pregnancy[accessedResource: NCIt:C34943][accessDate: 04-11-2010]
GeneRIF:15163465
GeneRIF:16091310
EPH Gestosis[accessedResource: MSH:D011225][accessDate: 04-11-2010]
GeneRIF:14671210
Pregnancy-induced hypertension (disorder)
GeneRIF:14638622
Pre-eclamptic toxaemia[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
GeneRIF:15193868
Gestational hypertension
Pre Eclampsia[accessedResource: MSH:D011225][accessDate: 04-11-2010]
Toxaemia NOS[accessedResource: SNOMEDCT:237280005][accessDate: 04-11-2010]
Pre-eclamptic toxemia
GeneRIF:14605992
Toxaemia of pregnancy
Pre-eclampsia NOS[accessedResource: SNOMEDCT:288201007][accessDate: 04-11-2010]
GeneRIF:12654717
GeneRIF:15886253
Toxaemia NOS
GeneRIF:15544427
GeneRIF:14671202
EPH Toxemias[accessedResource: MSH:D011225][accessDate: 04-11-2010]
A complication of PREGNANCY, characterized by a complex of symptoms including maternal HYPERTENSION and PROTEINURIA with or without pathological EDEMA. Symptoms may range between mild and severe. Pre-eclampsia usually occurs after the 20th week of gestation, but may develop before this time in the presence of trophoblastic disease.[accessedResource: MSH:D011225][accessDate: 04-11-2010]
GeneRIF:12044319
SNOMEDCT:398254007
Pregnancy Toxemia
Pregnancy-induced hypertension (disorder)[accessedResource: DOID:10591][accessDate: 04-11-2010]
GeneRIF:15501905
GeneRIF:15775999
hypertension of pregnancy NOS (disorder)
GeneRIF:15369653
GeneRIF:16182107
GeneRIF:12897464
GeneRIF:11854637
GeneRIF:15085177
GeneRIF:14634580
GeneRIF:12908999
PE - Pre-eclampsia[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
GeneRIF:14967168
GeneRIF:12727995
hypertension induced by pregnancy
Pre-eclampsia NOS (disorder)[accessedResource: DOID:10591][accessDate: 04-11-2010]
GeneRIF:15569322
EPH - Oedema, proteinuria and hypertension of pregnancy
Toxemias, Pregnancy
GeneRIF:12911547
GeneRIF:12173035
GeneRIF:14746952
GeneRIF:11969341
Toxaemia of pregnancy, NOS[accessedResource: SNOMEDCT:15394000][accessDate: 04-11-2010]
Pre-eclampsia, unspecified[accessedResource: SNOMEDCT:288201007][accessDate: 04-11-2010]
hypertension induced by pregnancy[accessedResource: DOID:10591][accessDate: 04-11-2010]
preeclampsia
GeneRIF:12867763
Toxemia of Pregnancy
GeneRIF:16021077
GeneRIF:12324185
SNOMEDCT:237280005
GeneRIF:15097012
A complication of PREGNANCY, characterized by a complex of symptoms including maternal HYPERTENSION and PROTEINURIA with or without pathological EDEMA. Symptoms may range between mild and severe. Pre-eclampsia usually occurs after the 20th week of gestation, but may develop before this time in the presence of trophoblastic disease.
DOID:10591
GeneRIF:14673478
Pre-eclampsia (disorder)[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
PREGN TOXEMIAS
Toxemia of pregnancy, NOS
GeneRIF:15042014
EPH Toxemia[accessedResource: MSH:D011225][accessDate: 04-11-2010]
Toxemia NOS (disorder)[accessedResource: SNOMEDCT:237280005][accessDate: 04-11-2010]
GeneRIF:15472115
GeneRIF:12362237
GeneRIF:15901845
GeneRIF:12699878
hypertension of pregnancy NOS[accessedResource: DOID:10591][accessDate: 04-11-2010]
Pregnancy associated hypertension
PET - Pre-eclamptic toxemia[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
GeneRIF:12104097
GeneRIF:12545206
Proteinuric hypertension of pregnancy
GeneRIF:16036389
Pre-Eclampsia
Pre-eclampsia NOS
GeneRIF:16157088
GeneRIF:12757936
GeneRIF:15784708
GeneRIF:16191421
GeneRIF:11905404
Pre-eclampsia NOS (disorder)
PET - Pre-eclamptic toxaemia
Pre-eclamptic NOS[accessedResource: DOID:10591][accessDate: 04-11-2010]
GeneRIF:14634568
GeneRIF:14517225
GeneRIF:11969342
hypertension of pregnancy NOS
GeneRIF:15097234
GeneRIF:15695771
GeneRIF:15866083
GeneRIF:15081636
Toxemia of pregnancy, NOS[accessedResource: SNOMEDCT:15394000][accessDate: 04-11-2010]
Toxemia NOS
Gestosis, Hypertension-Edema-Proteinuria
GeneRIF:16059745
GeneRIF:15110896
Toxaemia of pregnancy[accessedResource: SNOMEDCT:15394000][accessDate: 04-11-2010]
GeneRIF:12163461
GeneRIF:15817508
PET - Pre-eclamptic toxemia
GeneRIF:12651901
Edema-Proteinuria-Hypertension Gestosis[accessedResource: MSH:D011225][accessDate: 04-11-2010]
EPH Complex[accessedResource: MSH:D011225][accessDate: 04-11-2010]
GeneRIF:15364897
GeneRIF:15585559
Toxemia NOS[accessedResource: SNOMEDCT:237280005][accessDate: 04-11-2010]
SNOMEDCT:15394000
EPH Complex
Gestational hypertension (disorder)
Pre-eclamptic toxemia[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
Gestosis, EPH
Gestational hypertension (disorder)[accessedResource: DOID:10591][accessDate: 04-11-2010]
Pre-eclampsia, unspecified
Toxemia of pregnancy (disorder)
EPH - Edema, proteinuria and hypertension of pregnancy[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
EPH - Edema, proteinuria and hypertension of pregnancy
GeneRIF:12859429
MSH:D011225
Pre-eclamptic toxaemia
PREGN TOXEMIAS[accessedResource: MSH:D011225][accessDate: 04-11-2010]
GeneRIF:15140512
Pre-eclamptic NOS
EPH - Oedema, proteinuria and hypertension of pregnancy[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
hypertension of preg.[accessedResource: DOID:10591][accessDate: 04-11-2010]
Pregnancy associated hypertension[accessedResource: DOID:10591][accessDate: 04-11-2010]
GeneRIF:12892901
PE - Pre-eclampsia
Pregnancy Toxemias[accessedResource: MSH:D011225][accessDate: 04-11-2010]
pregnancy toxemia[accessedResource: DOID:10591][accessDate: 04-11-2010]
PET - Pre-eclamptic toxaemia[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
hypertension of pregnancy NOS (disorder)[accessedResource: DOID:10591][accessDate: 04-11-2010]
GeneRIF:12634647
Toxaemia of pregnancy, NOS
Gestational hypertension[accessedResource: DOID:10591][accessDate: 04-11-2010]
James Malone
GeneRIF:16021053
EPH Toxemia
GeneRIF:14662163
EPH Toxemias
GeneRIF:15082899
GeneRIF:11950065
GeneRIF:15974297
GeneRIF:15135235
hypertension of preg.
GeneRIF:12867761
GeneRIF:16150277
SNOMEDCT:288201007
Toxemia NOS (disorder)
http://www.ebi.ac.uk/efo/EFO_0002025
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#thermal_cycler
James Malone
thermal cycler
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#thermal_cycler[accessedResource: MO_854][accessDate: 04-11-2010]
An instrument that is capable of repeatedly altering and maintaining specific temperatures for defined periods of time.
Polymerase_Chain_Reaction_ machine
thermocycler
MO_854
DNA_amplifier
PCR_machine
embryonic day 15.5
Tomasz Adamusiak
Jie Zheng
James Malone
Ele Holloway
ITV
1.8
true
obsolete_MOLT4
James Malone
duplicate of EFO_0001220
Cancer of Prostate
Cancer of Prostate[accessedResource: NCIt:C4863][accessDate: 04-11-2010]
Prostate Cancer
Carcinoma of the Prostate[accessedResource: NCIt:C4863][accessDate: 04-11-2010]
Prostate Cancer[accessedResource: NCIt:C4863][accessDate: 04-11-2010]
Carcinoma of Prostate
DOID:10286
Tomasz Adamusiak
prostate carcinoma
One of the most common malignant tumors afflicting men. The majority of carcinomas arise in the peripheral zone and a minority occur in the central or the transitional zone of the prostate gland. Grossly, prostatic carcinomas appear as ill-defined yellow areas of discoloration in the prostate gland lobes. Adenocarcinomas represent the overwhelming majority of prostatic carcinomas. Prostatic-specific antigen (PSA) serum test is widely used as a screening test for the early detection of prostatic carcinoma. Treatment options include radical prostatectomy, radiation therapy, androgen ablation and cryotherapy. Watchful waiting or surveillance alone is an option for older patients with low-grade or low-stage disease. -- 2002
Carcinoma of Prostate[accessedResource: NCIt:C4863][accessDate: 04-11-2010]
Cancer of the Prostate[accessedResource: NCIt:C4863][accessDate: 04-11-2010]
Carcinoma of the Prostate
NCIt:C4863
One of the most common malignant tumors afflicting men. The majority of carcinomas arise in the peripheral zone and a minority occur in the central or the transitional zone of the prostate gland. Grossly, prostatic carcinomas appear as ill-defined yellow areas of discoloration in the prostate gland lobes. Adenocarcinomas represent the overwhelming majority of prostatic carcinomas. Prostatic-specific antigen (PSA) serum test is widely used as a screening test for the early detection of prostatic carcinoma. Treatment options include radical prostatectomy, radiation therapy, androgen ablation and cryotherapy. Watchful waiting or surveillance alone is an option for older patients with low-grade or low-stage disease. -- 2002[accessedResource: NCIt:C4863][accessDate: 04-11-2010]
Cancer of the Prostate
James Malone
A chorion cell line is a cell line that is derived from the chorion.
chorion cell line
COX-2 inhibitor
http://www.ebi.ac.uk/efo/EFO_0001890
CHEBI:50629
A cyclooxygenase inhibitor with specificity for cyclooxygenase 2.
cyclooxygenase 2 inhibitor
James Malone
Antimycin A1
antimycin A1b
Virosin
InChIKey=UIFFUZWRFRDZJC-MBZNLELHDN
antimycin A
Antipiricullin
C28H40N2O9
CHEBI:22584
InChI=1/C28H40N2O9/c1-6-7-8-9-11-20-25(39-22(32)14-16(2)3)18(5)38-28(36)23(17(4)37-27(20)35)30-26(34)19-12-10-13-21(24(19)33)29-15-31/h10,12-13,15-18,20,23,25,33H,6-9,11,14H2,1-5H3,(H,29,31)(H,30,34)/t17-,18+,20-,23+,25+/m1/s1/f/h29-30H
http://www.ebi.ac.uk/efo/EFO_0002668
[H]C(=O)Nc1cccc(C(=O)N[C@H]2[C@@H](C)OC(=O)[C@H](CCCCCC)[C@@H](OC(=O)CC(C)C)[C@H](C)OC2=O)c1O
(2R,3S,6S,7R,8R)-3-[(3-formamido-2-hydroxybenzoyl)amino]-8-hexyl-2,6-dimethyl-4,9-dioxo-1,5-dioxonan-7-yl 3-methylbutanoate
A nine-membered bis-lactone having methyl substituents at the 2- and 6-positions, an n-hexyl substituent at the 8-position, an acyloxy substituent at the 7-position and an aroylamido substituent at the 3-position. It is produced by Streptomyces bacteria and has found commercial use as a fish poison.
Fintrol
Use corpus striatum instead (EFO_0000381)
true
obsolete_CNS brain striatum MMHCC
CNS - Brain - Striatum (MMHCC)[accessedResource: NCIt:C22622][accessDate: 10-05-2010]
NCIt:C22622
Striatum
Striatum[accessedResource: NCIt:C22622][accessDate: 10-05-2010]
CNS - Brain - Striatum (MMHCC)
James Malone
ectoderm
The outer of the three germ layers of the embryo (the other two being mesoderm and endoderm). Ectoderm gives rise to epidermis and neural tissue.[accessedResource: BTO:0000315][accessDate: 04-11-2010]
The outer of the three germ layers of the embryo (the other two being mesoderm and endoderm). Ectoderm gives rise to epidermis and neural tissue.
dorsal ectoderm anlage[accessedResource: FBbt:00005428][accessDate: 04-11-2010]
BTO:0000315
FBbt:00005428
dorsal ectoderm anlage
Ele Holloway
BV173
James Malone
N-(3-trifluoromethylphenyl)anthranilic acid
InChI=1/C14H10F3NO2/c15-14(16,17)9-4-3-5-10(8-9)18-12-7-2-1-6-11(12)13(19)20/h1-8,18H,(H,19,20)/f/h19H
Surika
flufenamic acid
N-(alpha,alpha,alpha-trifluoro-m-tolyl)anthranilic acid
2-{[3-(trifluoromethyl)phenyl]amino}benzoic acid
3'-trifluoromethyldiphenylamine-2-carboxylic acid
Paraflu
Fullsafe
Ansatin
Tecramine
Ristogen
Arlef
acide flufenamique
acido flufenamico
Sastridex
Flufenaminsaeure
C14H10F3NO2
InChIKey=LPEPZBJOKDYZAD-LILDFLRNCJ
2-[3-(trifluoromethyl)anilino]benzoic acid
FFA
CHEBI:42638
Parlef
acidum flufenamicum
James Malone
fluphenamic acid
Achless
Meralen
http://www.ebi.ac.uk/efo/EFO_0001537
OC(=O)c1ccccc1Nc1cccc(c1)C(F)(F)F
Strain or line specific to Arabidopsis thaliana.
Arabidopsis thaliana
James Malone
embryonic day 8.25
Tomasz Adamusiak
Jie Zheng
Cervical canal
A constricted portion of an organ or part; especially: the narrow outer end of the uterus.[accessedResource: BTO:0001421][accessDate: 04-11-2010]
Neck of uterus[accessedResource: FMAID:17740][accessDate: 04-11-2010]
Neck of uterus
EV:0100114
Cervical canal of uterus
uterine cervix[accessedResource: BTO:0001421][accessDate: 04-11-2010]
Cervix of uterus
SAEL:118
James Malone
Cervical canal[accessedResource: FMAID:17740][accessDate: 04-11-2010]
FMAID:17740
BTO:0001421
cervix
MAT:0000292
uterine cervix
Cervix of uterus[accessedResource: FMAID:17740][accessDate: 04-11-2010]
A constricted portion of an organ or part; especially: the narrow outer end of the uterus.
Cervical canal of uterus[accessedResource: FMAID:17740][accessDate: 04-11-2010]
http://www.arabidopsis.org/servlets/TairObject?id=1005158907&type=germplasm
CS57883 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158907&type=germplasm
CS57883
James Malone
ovarian carcinoma
James Malone
RPMI6666
James Malone
Ele Holloway
FBbt:00005745
embryonic dorsal apodeme
James Malone
a planned process by which totally or partially complementary, single-stranded nucleic acids are combined into a single molecule called heteroduplex or homoduplex to an extent depending on the amount of complementarity.
A process by which totally or partially complementary, single-stranded nucleic acids are combined into a single molecule called heteroduplex or homoduplex to an extent depending on the amount of complementarity.
nucleic acid hybridization
WEB:http://en.wikipedia.org/wiki/Cardiomyopathy#Ischemic_cardiomyopathy
Ischemic cardiomyopathy is a cardiomyopathy in which a weakness in the muscle of the heart due to inadequate oxygen delivery to the myocardium with coronary artery disease being the most common cause.
ischemic cardiomyopathy
James Malone
true
A derived unit which is a standard measure of the amount of radiation emitted by a given radiation source as well as the amount of radiation absorbed or deposited in a specific material by a radiation source.
radiation unit
HCC202
James Malone
BTO:0001442
Any of the system of communicating cavities in the brain that are continuous with the central canal of the spinal cord.
A brain ventricle is a brain structure consisting of communicating cavities in the brain that are continuous with the central canal of the spinal cord.
Any of the system of communicating cavities in the brain that are continuous with the central canal of the spinal cord.[accessedResource: BTO:0001442][accessDate: 04-11-2010]
brain ventricle
James Malone
James Malone
Ele Holloway
Caki2
Caki-2
umbilical vein
A vein that passes through the umbilical cord to the fetus and returns the oxygenated and nutrient blood from the placenta to the fetus.
BTO:0001509
NCIt:C33830
James Malone
A vein that passes through the umbilical cord to the fetus and returns the oxygenated and nutrient blood from the placenta to the fetus.[accessedResource: BTO:0001509][accessDate: 04-11-2010]
Generalized metabolic disorder[accessedResource: SNOMEDCT:30390004][accessDate: 04-11-2010]
GeneRIF:15677734
SNOMEDCT:267456000
Disorder of metabolism NOS[accessedResource: SNOMEDCT:267456000][accessDate: 04-11-2010]
Metabolic disorders
GeneRIF:12242462
Generalized metabolic disorder (disorder)
Unspecified disorder of metabolism[accessedResource: DOID:0014667][accessDate: 04-11-2010]
Thesaurismoses[accessedResource: MSH:D008659][accessDate: 04-11-2010]
Metabolic disease, NOS[accessedResource: SNOMEDCT:75934005][accessDate: 04-11-2010]
METABOLISM DISORDER NOS
NCIt:C3235
Disorder of metabolism NOS (disorder)[accessedResource: SNOMEDCT:267456000][accessDate: 04-11-2010]
GeneRIF:15231871
Metabolic disease (disorder)[accessedResource: SNOMEDCT:75934005][accessDate: 04-11-2010]
DOID:0014667
A congenital (due to inherited enzyme abnormality) or acquired (due to failure of a metabolic important organ) disorder resulting from an abnormal metabolic process. -- 2003[accessedResource: NCIt:C3235][accessDate: 04-11-2010]
GeneRIF:15246202
MD - Metabolic disorders
DIS METAB[accessedResource: MSH:D008659][accessDate: 04-11-2010]
METABOLISM DISORDER NOS[accessedResource: ICD9:277.9][accessDate: 04-11-2010]
GeneRIF:12093894
Generalised metabolic disorder[accessedResource: SNOMEDCT:30390004][accessDate: 04-11-2010]
Generalized metabolic disorder
GeneRIF:12215968
GeneRIF:12707035
Diseases, Metabolic
Unspecified disorder of metabolism
disease of metabolism
Metabolic disorder, NOS[accessedResource: SNOMEDCT:75934005][accessDate: 04-11-2010]
Generic term for diseases caused by an abnormal metabolic process. It can be congenital due to inherited enzyme abnormality (METABOLISM, INBORN ERRORS) or acquired due to disease of an endocrine organ or failure of a metabolically important organ such as the liver. (Stedman, 26th ed)
metabolism disorder[accessedResource: DOID:0014667][accessDate: 04-11-2010]
James Malone
Thesaurismoses
disease of metabolism[accessedResource: DOID:0014667][accessDate: 04-11-2010]
DIS METAB
GeneRIF:16018179
MSH:D008659
Metabolic disorder, NOS
Metabolic disease, NOS
Metabolic Disorder
MD - Metabolic disorders[accessedResource: SNOMEDCT:75934005][accessDate: 04-11-2010]
Generalized metabolic disorder (disorder)[accessedResource: SNOMEDCT:30390004][accessDate: 04-11-2010]
Generalised metabolic disorder
Thesaurismosis
GeneRIF:12824951
Metabolic Diseases[accessedResource: MSH:D008659][accessDate: 04-11-2010]
Metabolic disorder[accessedResource: DOID:0014667][accessDate: 04-11-2010]
SNOMEDCT:75934005
Disorder of metabolism NOS
GeneRIF:12815182
A congenital (due to inherited enzyme abnormality) or acquired (due to failure of a metabolic important organ) disorder resulting from an abnormal metabolic process. -- 2003
SNOMEDCT:30390004
Generic term for diseases caused by an abnormal metabolic process. It can be congenital due to inherited enzyme abnormality (METABOLISM, INBORN ERRORS) or acquired due to disease of an endocrine organ or failure of a metabolically important organ such as the liver. (Stedman, 26th ed)[accessedResource: MSH:D008659][accessDate: 04-11-2010]
Disorder of metabolism NOS (disorder)
metabolism disorder
GeneRIF:14592951
GeneRIF:15277400
Thesaurismosis[accessedResource: MSH:D008659][accessDate: 04-11-2010]
metabolic disease
ICD9:277.9
Metabolic disease (disorder)
CGTHW1
James Malone
Ele Holloway
InChI=1/C21H30O2/c1-13(22)17-6-7-18-16-5-4-14-12-15(23)8-10-20(14,2)19(16)9-11-21(17,18)3/h12,16-19H,4-11H2,1-3H3/t16-,17+,18-,19-,20-,21+/m0/s1
InChIKey=RJKFOVLPORLFTN-LEKSSAKUBC
A 3-oxo Delta(4)-steroid that has formula C21H30O2.
progesterone
Agolutin
(S)-Pregn-4-en-3,20-dione
CHEBI:17026
C21H30O2
Delta(4)-pregnene-3,20-dione
Akrolutin
A steroid hormone that has formula C21H30O2.
4-Pregnene-3,20-dione
Crinone
17alpha-progesterone
Gelbkoerperhormon
(S)-4-Pregnene-3,20-dione
luteohormone
pregn-4-ene-3,20-dione
http://www.ebi.ac.uk/efo/EFO_0001598
corpus luteum hormone
Progesteron
(S)-Progesterone
[H][C@@]12CCC3=CC(=O)CC[C@]3(C)[C@@]1([H])CC[C@]1(C)[C@H](CC[C@@]21[H])C(C)=O
CNS - Brain - Hippocampus (MMHCC)
EMAPA:19148
Cornu Ammonis[accessedResource: NIFSTD:birnlex_726][accessDate: 04-11-2010]
Ammon's horn
FMAID:62493
A part of the brain consisting of a three layered cortex located in the forebrain bordering the medial surface of the lateral ventricle. The term hippocampus is often used synonymously with hippocampal formation which consists of the hippocampus proper or Cornu Ammonis, the dentate gyrus and the subiculum.
NIFSTD:birnlex_721
MAT:0000114
A curved elongated ridge that extends over the floor of the descending horn of each lateral ventricle of the brain and consists of gray matter covered on the ventricular surface with white matter;nThe hippocampus is a part of the temporal lobe, which has a well established role in learning, memory and emotion.[accessedResource: BTO:0000601][accessDate: 04-11-2010]
hippocampus
ammon horn[accessedResource: NIFSTD:birnlex_721][accessDate: 04-11-2010]
Hippocampus major[accessedResource: FMAID:62493][accessDate: 04-11-2010]
hippocampus proper[accessedResource: NIFSTD:birnlex_721][accessDate: 04-11-2010]
Hippocampus major
NCIt:C22615
James Malone
hippocampus proper
SAEL:51
CNS - Brain - Hippocampus (MMHCC)[accessedResource: NCIt:C22615][accessDate: 04-11-2010]
EV:0100180
Cornu ammonis
Tomasz Adamusiak
Ammon's horn[accessedResource: NIFSTD:birnlex_726][accessDate: 04-11-2010]
ammon horn
A curved elongated ridge that extends over the floor of the descending horn of each lateral ventricle of the brain and consists of gray matter covered on the ventricular surface with white matter;nThe hippocampus is a part of the temporal lobe, which has a well established role in learning, memory and emotion.
MA:0000191
NIFSTD:birnlex_726
BTO:0000601
A part of the brain consisting of a three layered cortex located in the forebrain bordering the medial surface of the lateral ventricle. The term hippocampus is often used synonymously with hippocampal formation which consists of the hippocampus proper or Cornu Ammonis, the dentate gyrus and the subiculum.[accessedResource: NIFSTD:birnlex_721][accessDate: 04-11-2010]
A427
James Malone
Ele Holloway
AIDS dementia complex[accessedResource: DOID:1305][accessDate: 04-11-2010]
AIDS with dementia (disorder)
DOID:1305
AIDS dementia
acquired immune deficiency syndrome dementia complex[accessedResource: DOID:1305][accessDate: 04-11-2010]
Tomasz Adamusiak
AIDS with dementia (disorder)[accessedResource: DOID:1305][accessDate: 04-11-2010]
HIV associated cognitive and motor complex[accessedResource: DOID:1305][accessDate: 04-11-2010]
NCIt:C2864
Acquired immune deficiency syndrome dementia complex
AIDS dementia complex
Ele Holloway
HIV encephalitis
HIV associated cognitive and motor complex
NCIt:C49221
esophageal epithelium
Tomasz Adamusiak
FMAID:9607
XAO:0000163
EMAPA:18768
MFO:0003240
MAT:0000080
A glandular structure of largely lymphoid tissue that functions especially in the development of the body's immune system, is present in the young of most vertebrates typically in the upper anterior chest or at the base of the neck, and tends to atrophy in the adult.[accessedResource: BTO:0001374][accessDate: 04-11-2010]
BTO:0001374
Thymus gland
EHDAA:9119
thymus
SAEL:107
Thymus gland[accessedResource: FMAID:9607][accessDate: 04-11-2010]
MA:0000142
A glandular structure of largely lymphoid tissue that functions especially in the development of the body's immune system, is present in the young of most vertebrates typically in the upper anterior chest or at the base of the neck, and tends to atrophy in the adult.
TAO:0001078
James Malone
ZFA:0001078
EV:0100138
The tumorigenic KS IMM cell line derives from Kaposi's sarcoma (KS), a highly angiogenic tumor.[accessedResource: BTO:0002070][accessDate: 04-11-2010]
KSIMM cell
A KS-IMM is a cell line.
A KS-IMM is bearer of a Kaposi's sarcoma.
The tumorigenic KS IMM cell line derives from Kaposi's sarcoma (KS), a highly angiogenic tumor.
KS-IMM cell[accessedResource: BTO:0002070][accessDate: 04-11-2010]
BTO:0002070
James Malone
KS-IMM
Ele Holloway
KS IMM cell
KSIMM cell[accessedResource: BTO:0002070][accessDate: 04-11-2010]
2.0.1
true
Strain or line specific to Drosophila melanogaster
obsolete_Drosophila melanogaster strain
James Malone
consolodation of strain with taxon, all subclasses moved to Drosophila melanogaster
Ele Holloway
HMCB
James Malone
A site from which a sample, i.e. a statistically representative of the whole, is extracted from the whole. e.g. a liver sample
sampling site
James Malone
Ryukyu mouse
http://www.ebi.ac.uk/efo/EFO_0002645
Mus caroli
James Malone
respiratory epithelium[accessedResource: BTO:0000419][accessDate: 04-11-2010]
respiratory epithelium
CL:0002368
An endo-epithelial cell of the respiratory tract.
airway epithelium
airway epithelium[accessedResource: BTO:0000419][accessDate: 04-11-2010]
respiratory epithelial cell
An endo-epithelial cell of the respiratory tract.[accessedResource: CL:0002368][accessDate: 04-11-2010]
Epithelium of the respiratory portion of the bronchial tree.[accessedResource: BTO:0000419][accessDate: 04-11-2010]
Epithelium of the respiratory portion of the bronchial tree.
BTO:0000419
Tomasz Adamusiak
respiratory epithelial cell[accessedResource: CL:0002368][accessDate: 04-11-2010]
airway epithelial cell
NCIt:C12778
renal artery
Tomasz Adamusiak
Jie Zheng
8-chloro-11-(4-methylpiperazin-1-yl)-5H-dibenzo[b,e][1,4]diazepine
InChI=1/C18H19ClN4/c1-22-8-10-23(11-9-22)18-14-4-2-3-5-15(14)20-16-7-6-13(19)12-17(16)21-18/h2-7,12,20H,8-11H2,1H3
clozapine
James Malone
Clozapin
A benzodiazepine that has formula C18H19ClN4.
CN1CCN(CC1)C1=Nc2cc(Cl)ccc2Nc2ccccc12
CN1CCN(CC1)C2=Nc3cc(Cl)ccc3Nc4ccccc24
InChIKey=QZUDBNBUXVUHMW-UHFFFAOYAL
CHEBI:3766
http://www.ebi.ac.uk/efo/EFO_0001510
clozapina
clozapinum
C18H19ClN4
Superficial layer of the brain, composed of glia and the cell bodies of neurons (soma).
EHDAA:5464
James Malone
BTO:0000233
MAT:0000108
SAEL:20
Cortex of cerebrum[accessedResource: FMAID:61830][accessDate: 04-11-2010]
EV:0100166
MA:0000185
FMAID:61830
brain cortex[accessedResource: BTO:0000233][accessDate: 04-11-2010]
adult brain cortex[accessedResource: FBbt:00003625][accessDate: 04-11-2010]
Cortex of cerebrum
The surface layer of gray matter of the cerebrum that functions chiefly in coordination of sensory and motor information.[accessedResource: BTO:0000233][accessDate: 04-11-2010]
cerebral cortex
FBbt:00003625
brain cortex
Cortex of cerebral hemisphere
Cortex of cerebral hemisphere[accessedResource: FMAID:61830][accessDate: 04-11-2010]
EMAPA:17544
adult brain cortex
The surface layer of gray matter of the cerebrum that functions chiefly in coordination of sensory and motor information.
perikaryal rind[accessedResource: FBbt:00003625][accessDate: 04-11-2010]
perikaryal rind
Superficial layer of the brain, composed of glia and the cell bodies of neurons (soma).[accessedResource: FBbt:00003625][accessDate: 04-11-2010]
Synonym of environmental factor
true
The external elements and conditions which surround, influence, and affect the life and development of an organism or population.
obsolete_environment
James Malone
phospholipase A2 inhibitors
http://www.ebi.ac.uk/efo/EFO_0001887
CHEBI:50469
phospholipase A2 inhibitor
James Malone
NCI-H2087
James Malone
Ele Holloway
CL:0000062
A bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone.
A bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone.[accessedResource: CL:0000062][accessDate: 04-11-2010]
osteoblast
James Malone
mesonephron
The excretory organ of the embryo, arising caudal to the pronephros or pronephric rudiments and using its duct; it consists of a long tube in the lower part of the body cavity, running parallel with the vertebral axis and joined at right angles by a row of twisting tubes.[accessedResource: BTO:0001542][accessDate: 04-11-2010]
The functioning kidney in fish and amphibia[accessedResource: MAT:0000118][accessDate: 04-11-2010]
The excretory organ of the embryo, arising caudal to the pronephros or pronephric rudiments and using its duct; it consists of a long tube in the lower part of the body cavity, running parallel with the vertebral axis and joined at right angles by a row of twisting tubes.
BTO:0001542
wolffian body[accessedResource: BTO:0001542][accessDate: 04-11-2010]
middle kidney[accessedResource: BTO:0001542][accessDate: 04-11-2010]
kidney
mesonephros
James Malone
mesonephrpric kidney
mesonephrpric kidney[accessedResource: MAT:0000118][accessDate: 04-11-2010]
corpus Wolffi
kidney - fish
corpus Wolffi[accessedResource: BTO:0001542][accessDate: 04-11-2010]
kidney[accessedResource: TAO:0000529][accessDate: 04-11-2010]
MFO:0003300
mesonephron[accessedResource: BTO:0001542][accessDate: 04-11-2010]
mesonephros - adult[accessedResource: MAT:0000118][accessDate: 04-11-2010]
MAT:0000118
ZFA:0000529
wolffian body
TAO:0000529
mesonephros - adult
XAO:0000154
middle kidney
The functioning kidney in fish and amphibia
kidney - fish[accessedResource: MAT:0000118][accessDate: 04-11-2010]
scapula
Shoulder Blade
The flat triangle-shaped bone that connects the humerus with the clavicle in the back of the shoulder.[accessedResource: NCIt:C12783][accessDate: 04-11-2010]
BTO:0001218
Shoulder Blade[accessedResource: NCIt:C12783][accessDate: 04-11-2010]
scapula bone[accessedResource: BTO:0001218][accessDate: 04-11-2010]
Either of a pair of large triangular bones lying one in each dorsal lateral scapula: part of the thorax, being the principal bone of the corresponding half of the shoulder girdle, and articulating with the corresponding clavicle or coracoid.
NCIt:C12783
scapula bone
Either of a pair of large triangular bones lying one in each dorsal lateral scapula: part of the thorax, being the principal bone of the corresponding half of the shoulder girdle, and articulating with the corresponding clavicle or coracoid.[accessedResource: BTO:0001218][accessDate: 04-11-2010]
James Malone
The flat triangle-shaped bone that connects the humerus with the clavicle in the back of the shoulder.
BTO:0001563
vastus lateralis
NCIt:C53073
James Malone
The division of the quadriceps muscle that covers the outer anterior aspect of the femur, arises chiefly from the femur, and inserts into the outer border of the patella by a flat tendon which blends with that of the other divisions of the muscle and sends an expansion to the capsule of the knee.[accessedResource: BTO:0001563][accessDate: 04-11-2010]
vastus externus[accessedResource: BTO:0001563][accessDate: 04-11-2010]
vastus externus
The division of the quadriceps muscle that covers the outer anterior aspect of the femur, arises chiefly from the femur, and inserts into the outer border of the patella by a flat tendon which blends with that of the other divisions of the muscle and sends an expansion to the capsule of the knee.
A drug, solvent, chemical, etc., with a property that can be measured such as concentration.
heteroatomic molecular entities
heteroatomic molecular entity
Tomasz Adamusiak
chemical compound
true
A molecular entity consisting of two or more chemical elements.
James Malone
A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#male[accessedResource: MO_652][accessDate: 04-11-2010]
A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes.[accessedResource: PATO:0000384][accessDate: 04-11-2010]
MO_652
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#male
Jie Zheng
James Malone
male
CARO:0000027
Tomasz Adamusiak
PATO:0000384
NK cell
large granular lymphocyte
A lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells.
null cell[accessedResource: CL:0000623][accessDate: 04-11-2010]
null cell
A large granular lymphocyte capable of killing a tumor or microbial cell without prior exposure to the target cell and without having it presented with or marked by a histocompatibility antigen.[accessedResource: BTO:0000914][accessDate: 04-11-2010]
A large granular lymphocyte capable of killing a tumor or microbial cell without prior exposure to the target cell and without having it presented with or marked by a histocompatibility antigen.
James Malone
NK cell[accessedResource: CL:0000623][accessDate: 04-11-2010]
natural killer cell
CL:0000623
natural killer
large granular lymphocyte[accessedResource: CL:0000623][accessDate: 04-11-2010]
A lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells.[accessedResource: CL:0000623][accessDate: 04-11-2010]
BTO:0000914
ILSXISS62/TejJ
Tomasz Adamusiak
S-[2,3-bis(palmitoyloxy)-(2RS)-propyl]-[R]-cysteinyl-[S]-seryl-[S]-lysyl-[S]-lysyl-[S]-lysyl-[S]-lysine
S-[2,3-bis(palmitoyloxy)propyl]-L-cysteinyl-L-seryl-L-lysyl-L-lysyl-L-lysyl-L-lysine
http://www.ebi.ac.uk/efo/EFO_0001607
S-[2,3-bis(palmitoyloxy)propyl]-Cys-Ser-Lys-Lys-Lys-Lys
CHEBI:46889
CCCCCCCCCCCCCCCC(=O)OCC(CSC[C@H](N)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(O)=O)OC(=O)CCCCCCCCCCCCCCC
S-[2,3-bis(hexadecanoyloxy)propyl]-L-cysteinyl-L-seryl-L-lysyl-L-lysyl-L-lysyl-L-lysine
C65H126N10O12S
Pam2CSK4
InChI=1/C65H126N10O12S/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-41-58(77)86-48-51(87-59(78)42-28-26-24-22-20-18-16-14-12-10-8-6-4-2)49-88-50-52(70)60(79)75-57(47-76)64(83)73-54(38-30-34-44-67)62(81)71-53(37-29-33-43-66)61(80)72-55(39-31-35-45-68)63(82)74-56(65(84)85)40-32-36-46-69/h51-57,76H,3-50,66-70H2,1-2H3,(H,71,81)(H,72,80)(H,73,83)(H,74,82)(H,75,79)(H,84,85)/t51?,52-,53-,54-,55-,56-,57-/m0/s1/f/h71-75,84H
A diacyl lipopeptide that has formula C65H126N10O12S.
InChIKey=LJUIOEFZFQRWJG-URZMOCQLDI
Layer that lines the lumen of the heart.
ZFA:0001320
FMAID:7280
A thin serous membrane lining the cavities of the heart.
endocardium
James Malone
MA:0000076
MAT:0000455
EMAPA:17868
BTO:0000387
Tunica intima which has as its parts the endothelium of endocardium and the fibroelastic connective tissue that surrounds the cavity of a cardiac chamber.
Layer that lines the lumen of the heart.[accessedResource: ZFA:0001320][accessDate: 04-11-2010]
TAO:0001320
A thin serous membrane lining the cavities of the heart.[accessedResource: BTO:0000387][accessDate: 04-11-2010]
EV:0100021
NB4
James Malone
MDAMB361
DG75
James Malone
Ele Holloway
spinocerebellar ataxia type 1
Tomasz Adamusiak
Villitis (disorder)[accessedResource: SNOMEDCT:388604008][accessDate: 04-11-2010]
Tomasz Adamusiak
Villositis
Villitis (disorder)
Inflammation of chorionic villi[accessedResource: SNOMEDCT:388604008][accessDate: 04-11-2010]
Inflammation of chorionic villi
SNOMEDCT:388604008
Villositis[accessedResource: SNOMEDCT:388604008][accessDate: 04-11-2010]
villitis
An instrument design is an information entity that describes the setup and design of an instrument.
instrument design
James Malone
NYHA class III
moderate heart failure
Tomasz Adamusiak
A malignant epithelial neoplasm composed of large, atypical cells.
Tomasz Adamusiak
A malignant epithelial neoplasm composed of large, atypical cells.[accessedResource: NCIt:C3780][accessDate: 04-11-2010]
large cell carcinomas
Large Cell Carcinoma
large cell lung carcinoma
large cell carcinomas[accessedResource: NCIt:C3780][accessDate: 04-11-2010]
Carcinoma, Large Cell[accessedResource: NCIt:C3780][accessDate: 04-11-2010]
NCIt:C3780
http://www.arabidopsis.org/servlets/TairObject?id=1005158575&type=germplasm
CS57551 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158575&type=germplasm
CS57551
James Malone
James Malone
A triploid nutritive tissue resulting from the fusion of a haploid sperm nucleus with the two haploid polar nuclei in the ovule of angiosperms.[accessedResource: BTO:0000390][accessDate: 04-11-2010]
PO:0009089
GRO:0005361
MAT:0000227
GRO:0005361[accessedResource: BTO:0000390][accessDate: 04-11-2010]
A triploid nutritive tissue resulting from the fusion of a haploid sperm nucleus with the two haploid polar nuclei in the ovule of angiosperms.
endosperm
BTO:0000390
mucinous carcinoma
James Malone
BTO:0000713
GRO:0005306[accessedResource: BTO:0000713][accessDate: 04-11-2010]
James Malone
ZEA:0015031
MAT:0000234
A lateral outgrowth from a plant stem that is typically a flattened expanded variably shaped greenish organ, constitutes a unit of the foliage, and functions primarily in food manufacture by photosynthesis.
leaf
A lateral outgrowth from a plant stem that is typically a flattened expanded variably shaped greenish organ, constitutes a unit of the foliage, and functions primarily in food manufacture by photosynthesis.[accessedResource: BTO:0000713][accessDate: 04-11-2010]
PO:0009025
GRO:0005306
NCIt:C12843
A principal artery that originates in the aorta. It supplies blood to the muscular tissue of the heart.
A principal artery that originates in the aorta. It supplies blood to the muscular tissue of the heart.[accessedResource: NCIt:C12843][accessDate: 04-11-2010]
coronary artery
Tomasz Adamusiak
Jie Zheng
MCC:0000006
James Malone
human embryonic kidney cell
HEK293
A human cell line derived from some renal leiomyeloblastoma
G402
James Malone
Ele Holloway
James Malone
SK-ES-1
Ele Holloway
SK ES1
MO_796
ng
A mass unit which is equal to one thousandth of one millionth of a gram or 10^[-9] g.
A microgram is a mass unit which is equal to 1 gram x 10^-9
true
http://www.ebi.ac.uk/efo/EFO_0001708
Jie Zheng
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ng[accessedResource: MO_796][accessDate: 04-11-2010]
nanogram
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ng
CHEBI:34165
http://www.ebi.ac.uk/efo/EFO_0002485
16-ketoestradiol
James Malone
Ele Holloway
GM12814
James Malone
spinocerebellar ataxia type 7
Tomasz Adamusiak
NCIt:C43393
Denotes the inhabitants of the Philippine Islands, a person from there, or their descendants elsewhere.
Denotes the inhabitants of the Philippine Islands, a person from there, or their descendants elsewhere.[accessedResource: NCIt:C43393][accessDate: 04-11-2010]
Filipino
Tomasz Adamusiak
James Malone
An adipose tissue associated with the amphibiian gonad[accessedResource: MAT:0000456][accessDate: 04-11-2010]
An adipose tissue associated with the amphibiian gonad
fat body sensu amphibia
Fat_bodies[accessedResource: MAT:0000456][accessDate: 04-11-2010]
MAT:0000456
Fat_bodies
AAO:0000157
James Malone
PAC2
James Malone
A time unit which is equal to 3600 seconds or 60 minutes.
http://www.ebi.ac.uk/efo/EFO_0001790
true
An hour is a derived time unit which is equal to 3600 seconds or 60 minutes.
h
hour
UO:0000032
MO_887
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#time_series_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#time_series_design[accessedResource: MO_887][accessDate: 04-11-2010]
time series design
Tomasz Adamusiak
pygmy chimpanzee
Bonobo
http://www.ebi.ac.uk/efo/EFO_0002650
Pan paniscus
James Malone
http://www.ebi.ac.uk/efo/EFO_0001889
CHEBI:50505
Substance that sweeten food, beverages, medications, etc.
sweetening agent
James Malone
SNOMEDCT:85898001
extrinsic cardiomyopathy
extrinsic cardiomyopathy[accessedResource: DOID:3978][accessDate: 04-11-2010]
Myocardial disease (disorder)
Myocardial disease (disorder)[accessedResource: SNOMEDCT:57809008][accessDate: 04-11-2010]
PRIM CARDIOMYOPATHY NEC
[X]Cardiomyopathy in other diseases classified elsewhere[accessedResource: SNOMEDCT:195580005][accessDate: 04-11-2010]
[X]Cardiomyopathy in other diseases classified elsewhere
Other primary cardiomyopathies (disorder)[accessedResource: SNOMEDCT:195017006][accessDate: 04-11-2010]
[X]Cardiomyopathy in other diseases classified elsewhere (disorder)[accessedResource: SNOMEDCT:195580005][accessDate: 04-11-2010]
CARDIOMYOPATH IN OTH DIS[accessedResource: ICD9:425.8][accessDate: 04-11-2010]
Disorder of heart muscle[accessedResource: SNOMEDCT:57809008][accessDate: 04-11-2010]
Other primary cardiomyopathy NOS (disorder)
Myocardiopathy, NOS[accessedResource: SNOMEDCT:85898001][accessDate: 04-11-2010]
Myocardial disease
Cardiomyopathy in other diseases classified elsewhere
Other primary cardiomyopathy NOS (disorder)[accessedResource: SNOMEDCT:195022006][accessDate: 04-11-2010]
Cardiomyopathy, NOS
Other primary cardiomyopathy NOS
Cardiomyopathy NOS (disorder)[accessedResource: SNOMEDCT:195037005][accessDate: 04-11-2010]
Cardiomyopathy NOS[accessedResource: SNOMEDCT:195037005][accessDate: 04-11-2010]
SNOMEDCT:195037005
Myocardiopathy[accessedResource: SNOMEDCT:85898001][accessDate: 04-11-2010]
Other primary cardiomyopathies[accessedResource: SNOMEDCT:195017006][accessDate: 04-11-2010]
A disease of the heart muscle or myocardium proper. Cardiomyopathies may be classified as either primary or secondary, on the basis of etiology, or on the pathophysiology of the lesion: hypertrophic, dilated, or restrictive.
Myocardial Disorder[accessedResource: NCIt:C35544][accessDate: 04-11-2010]
DOID:3978
ICD9:425
Myocardial Disorder
[X]Cardiomyopathy in other diseases classified elsewhere (disorder)
James Malone
ICD9:425.8
Other primary cardiomyopathies
Disorder of heart muscle
SNOMEDCT:57809008
NCIt:C34830
Cardiomyopathy in other diseases classified elsewhere[accessedResource: ICD9:425.8][accessDate: 04-11-2010]
Myocardiopathy
SNOMEDCT:195022006
Cardiomyopathy (disorder)[accessedResource: SNOMEDCT:85898001][accessDate: 04-11-2010]
Other primary cardiomyopathy NOS[accessedResource: SNOMEDCT:195022006][accessDate: 04-11-2010]
cardiomyopathy
CARDIOMYOPATH IN OTH DIS
Cardiomyopathy NOS (disorder)
Disorder of myocardium
Myocardial disease, NOS
SNOMEDCT:195580005
Myocardiopathy, NOS
NCIt:C35544
Myocardial disease, NOS[accessedResource: SNOMEDCT:57809008][accessDate: 04-11-2010]
Cardiomyopathy (disorder)
ICD9:425.4
Disorder of myocardium[accessedResource: SNOMEDCT:57809008][accessDate: 04-11-2010]
Myocardial disease[accessedResource: SNOMEDCT:57809008][accessDate: 04-11-2010]
PRIM CARDIOMYOPATHY NEC[accessedResource: ICD9:425.4][accessDate: 04-11-2010]
SNOMEDCT:195017006
A disease of the heart muscle or myocardium proper. Cardiomyopathies may be classified as either primary or secondary, on the basis of etiology, or on the pathophysiology of the lesion: hypertrophic, dilated, or restrictive.[accessedResource: NCIt:C34830][accessDate: 04-11-2010]
Other primary cardiomyopathies (disorder)
http://www.arabidopsis.org/servlets/TairObject?id=1005158640&type=germplasm
CS57616 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158640&type=germplasm
CS57616
James Malone
erythroblastoid cell line
MO_952
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#biological_replicate
A biological replicate is a replicate role that consists of independent biological replicates made from different individual BioSources.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#biological_replicate[accessedResource: MO_952][accessDate: 04-11-2010]
biological replicate
James Malone
Ele Holloway
James Malone
Lu135
Lu-135
JCRB0170
SNU475
James Malone
Ele Holloway
SHEP-SF
James Malone
Ele Holloway
Limb[accessedResource: FMAID:7182][accessDate: 04-11-2010]
Extremity[accessedResource: FMAID:7182][accessDate: 04-11-2010]
limb sensu vertebrata
James Malone
EMAPA:16405
XAO:0003027
vertebrata limb
limb
Cardinal body part, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with a complete set of bones of the appendicular skeleton, it is partially surrounded by skin of limb. Examples: There are only four instances, right upper and lower limbs and left upper and lower limbs.
EHDAA:1697
limb sensu vertebrata[accessedResource: MAT:0000090][accessDate: 04-11-2010]
MA:0000007
vertebrate limb
FMAID:7182
EV:0100483
MAT:0000090
Extremity
http://www.ebi.ac.uk/efo/EFO_0001699
A derived unit which represents a standard measurement of temperature in a particular temperature scale.
true
UO:0000126
A dervied temperature unit is a derived unit which represents a standard measurement of temperature in a particular temperature scale.
James Malone
derived temperature unit
Blei
A carbon group element that has formula Pb.
InChIKey=WABPQHHGFIMREM-UHFFFAOYAT
Ele Holloway
plumbum
plomo
lead atom
82Pb
http://www.ebi.ac.uk/efo/EFO_0002412
InChI=1/Pb
CHEBI:25016
James Malone
A carbon group element atom that has formula Pb.
[Pb]
plomb
lead
GeneRIF:12707035
RCC
GeneRIF:15945081
GeneRIF:12584564
Adenocarcinoma of Kidney
Carcinoma, Collecting Duct (Kidney)
Clear cell carcinoma of kidney (disorder)[accessedResource: SNOMEDCT:254915003][accessDate: 04-11-2010]
GeneRIF:15502805
GeneRIF:14696115
GeneRIF:15893810
GeneRIF:14517280
GeneRIF:15998523
GeneRIF:16213477
GeneRIF:15145526
Nephroid Carcinoma[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:12695553
GeneRIF:15273700
A carcinoma arising from the renal parenchyma. The incidence of renal cell carcinoma has increased by 35% from 1973 to 1991. There is a strong correlation between cigarette smoking and the development of renal cell carcinoma. The clinical presentation includes : hematuria, flank pain and a palpable lumbar mass. A high percentage of renal cell carcinomas are diagnosed when an ultrasound is performed for other purposes. Diagnostic procedures include: ultra sound, intravenous pyelography and computed tomography (CT). Radical nephrectomy is the standard intervention procedure. Renal cell carcinoma is generally considered to be resistant to radiation treatment and chemotherapy.
GeneRIF:16061872
GeneRIF:12036906
GeneRIF:15809750
GeneRIF:14559244
GeneRIF:15930277
Sarcomatoid Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:12496483
GeneRIF:12963978
DOID:4450
renal cell cancer
GeneRIF:15247770
Clear Cell Renal Cell Carcinoma
GeneRIF:12736050
NCIt:C9385
Nephroid Carcinomas
GeneRIF:12209602
Sarcomatoid Renal Cell Carcinoma
Hypernephroma (disorder)
GeneRIF:15780567
GeneRIF:16221209
Adenocarcinoma of the Kidney
GeneRIF:12016154
GeneRIF:15375503
GeneRIF:15671550
GeneRIF:12845675
Hypernephroma[accessedResource: SNOMEDCT:41607009][accessDate: 04-11-2010]
GeneRIF:14666709
GeneRIF:14648699
GeneRIF:15985433
GeneRIF:15358199
GeneRIF:14565870
GeneRIF:12025227
Renal cell carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:41607009][accessDate: 04-11-2010]
GeneRIF:15701841
GeneRIF:12750296
GeneRIF:11865300
Duct Carcinomas, Collecting (Kidney)
GeneRIF:12697836
Nephroid Carcinoma
GeneRIF:15569051
GeneRIF:15900605
GeneRIF:11840338
GeneRIF:11597145
GeneRIF:16145471
Renal Cell Carcinoma, Stage Unspecified[accessedResource: NCIt:C9385][accessDate: 04-11-2010]
GeneRIF:12684625
GeneRIF:15086915
GeneRIF:12375029
GeneRIF:11759057
GeneRIF:15826766
GeneRIF:12766581
GeneRIF:16244585
GeneRIF:12208877
GeneRIF:12474536
Hypernephroid Carcinomas
GeneRIF:15791570
GeneRIF:12631591
Clear cell carcinoma of kidney (disorder)
GeneRIF:14663360
Adenocarcinoma, Renal Cell
Chromophobe Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:11721640
GeneRIF:14981908
Duct Carcinoma, Collecting (Kidney)[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:12874014
GeneRIF:16157291
Renal Cell Adenocarcinomas[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:15245963
Carcinomas, Hypernephroid[accessedResource: MSH:D002292][accessDate: 04-11-2010]
Renal cell carcinoma - morphology[accessedResource: SNOMEDCT:41607009][accessDate: 04-11-2010]
Clear Cell Renal Carcinoma
Hypernephroma
Adenocarcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:12402975
GeneRIF:12209956
GeneRIF:14534724
GeneRIF:14712483
GeneRIF:16015044
Hypernephromas
GeneRIF:15107966
GeneRIF:11920465
Hypernephromas[accessedResource: MSH:D002292][accessDate: 04-11-2010]
MSH:D002292
GeneRIF:15665272
Kidney Adenocarcinoma
Chromophobe Renal Cell Carcinoma
Clear Cell Renal Carcinoma[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:12708469
GeneRIF:14676131
GeneRIF:11749694
renal cell carcinoma
GeneRIF:15198927
GeneRIF:15319295
GeneRIF:11712081
GeneRIF:14519627
Grawitz tumour
GeneRIF:14520461
hypernephroma (disorder)[accessedResource: DOID:4450][accessDate: 04-11-2010]
Adenocarcinomas, Renal Cell
Grawitz tumor[accessedResource: SNOMEDCT:254915003][accessDate: 04-11-2010]
GeneRIF:12452054
GeneRIF:12646256
Papillary Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:12781449
GeneRIF:15350301
GeneRIF:15709180
GeneRIF:15578072
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:15086466
RCC[accessedResource: NCIt:C9385][accessDate: 04-11-2010]
Papillary Renal Cell Carcinoma
Clear Cell Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:15448019
Renal cell carcinoma - morphology
Carcinomas, Renal Cell
GeneRIF:12115583
GeneRIF:15608669
Adenocarcinoma of the Kidney[accessedResource: NCIt:C9385][accessDate: 04-11-2010]
GeneRIF:14559790
Renal Cell Carcinoma, Stage Unspecified
GeneRIF:12496484
GeneRIF:15285879
SNOMEDCT:254915003
GeneRIF:16254461
Hypernephroid Carcinoma
A carcinoma arising from the renal parenchyma. The incidence of renal cell carcinoma has increased by 35% from 1973 to 1991. There is a strong correlation between cigarette smoking and the development of renal cell carcinoma. The clinical presentation includes : hematuria, flank pain and a palpable lumbar mass. A high percentage of renal cell carcinomas are diagnosed when an ultrasound is performed for other purposes. Diagnostic procedures include: ultra sound, intravenous pyelography and computed tomography (CT). Radical nephrectomy is the standard intervention procedure. Renal cell carcinoma is generally considered to be resistant to radiation treatment and chemotherapy.[accessedResource: NCIt:C9385][accessDate: 04-11-2010]
GeneRIF:11921283
GeneRIF:14693268
GeneRIF:12207901
GeneRIF:12970754
Adenocarcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 04-11-2010]
Carcinomas, Collecting Duct (Kidney)[accessedResource: MSH:D002292][accessDate: 04-11-2010]
Renal cell carcinoma (morphologic abnormality)
GeneRIF:15300849
GeneRIF:16164647
Renal Cell Carcinomas[accessedResource: MSH:D002292][accessDate: 04-11-2010]
Kidney Adenocarcinoma[accessedResource: NCIt:C9385][accessDate: 04-11-2010]
GeneRIF:15365652
James Malone
Carcinoma, Hypernephroid[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:16237213
Renal Cell Cancer[accessedResource: NCIt:C9385][accessDate: 04-11-2010]
Grawitz Tumor
GeneRIF:15661050
Grawitz tumour[accessedResource: SNOMEDCT:41607009][accessDate: 04-11-2010]
GeneRIF:16077991
GeneRIF:15274119
GeneRIF:12640117
GeneRIF:12770739
GeneRIF:16210641
SNOMEDCT:41607009
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.
Carcinoma of kidney
GeneRIF:11896565
Clear cell carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 04-11-2010]
Carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 04-11-2010]
GeneRIF:11714447
GeneRIF:12594819
GeneRIF:15102668
Clear cell carcinoma of kidney
GeneRIF:15867365
GeneRIF:12692265
GeneRIF:15747097
Nephroid Carcinomas[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:15217953
GeneRIF:12597245
GeneRIF:15906349
SNOMEDCT:188251003
GeneRIF:12893366
GeneRIF:14612902
http://jaxmice.jax.org/strain/009316.html
ILSXISS80/TejJ
Tomasz Adamusiak
T3M4
Panc89
James Malone
Ele Holloway
Tomasz Adamusiak
A neuron that has the specialized function to produce and secrete hormones, and that constitutes, in whole or in part, an endocrine organ or system.[accessedResource: CL:0000165][accessDate: 04-11-2010]
Neuroendocrine cells are cells that receive neuronal input (neurotransmitters released by nerve cells) and, as a consequence of this input, release message molecules (hormones) to the blood. In this way they bring about and integration between the nervous system and the endocrine system, a process known as neuroendocrine integration. An example of a neuroendocrine cell is the cell of the adrenal medulla (innermost part of the adrenal gland) which releases adrenalin to the blood. The adrenal medullary cells are controlled by the sympathetic division of the autonomic nervous system. These cells are modified postganglionic neurons. Autonomic nerve fibers lead directly to them from the central nervous system. The major center of neuroendocrine integration in the body is found in the hypothalamus and the pituitary gland. Here hypothalamic neurosecretory cells release factors to the blood. Some of these these factors, release at the median eminence, control the secretion of pituitary hormones, while others (the hormones oxytocin and vasopressin) are released directly to the peripheral circulation.
CL:0000165
A neuron that has the specialized function to produce and secrete hormones, and that constitutes, in whole or in part, an endocrine organ or system.
neurosecretory cell
neurosecretory cell[accessedResource: CL:0000165][accessDate: 04-11-2010]
BTO:0002691
neuroendocrine cell
Neuroendocrine cells are cells that receive neuronal input (neurotransmitters released by nerve cells) and, as a consequence of this input, release message molecules (hormones) to the blood. In this way they bring about and integration between the nervous system and the endocrine system, a process known as neuroendocrine integration. An example of a neuroendocrine cell is the cell of the adrenal medulla (innermost part of the adrenal gland) which releases adrenalin to the blood. The adrenal medullary cells are controlled by the sympathetic division of the autonomic nervous system. These cells are modified postganglionic neurons. Autonomic nerve fibers lead directly to them from the central nervous system. The major center of neuroendocrine integration in the body is found in the hypothalamus and the pituitary gland. Here hypothalamic neurosecretory cells release factors to the blood. Some of these these factors, release at the median eminence, control the secretion of pituitary hormones, while others (the hormones oxytocin and vasopressin) are released directly to the peripheral circulation.[accessedResource: BTO:0002691][accessDate: 04-11-2010]
FBbt:00004482
The fused compact cephalic plates that comprise the head, excluding the eyes, antennae and mouthparts.
The fused compact cephalic plates that comprise the head, excluding the eyes, antennae and mouthparts.[accessedResource: FBbt:00004482][accessDate: 04-11-2010]
head capsule
James Malone
http://jaxmice.jax.org/strain/009270.html
ILSXISS48/TejJ
Tomasz Adamusiak
CL:0000617
GABA-ergic neuron
A neuron that uses GABA as a vesicular neurotransmitter
GABA-ergic neuron[accessedResource: CL:0000617][accessDate: 04-11-2010]
A neuron that uses GABA as a vesicular neurotransmitter[accessedResource: CL:0000617][accessDate: 04-11-2010]
GABAergic neuron
James Malone
circular visceral muscle precursor[accessedResource: FBbt:00017015][accessDate: 04-11-2010]
circular visceral muscle precursor
P1 ViMus
P1 ViMus[accessedResource: FBbt:00017015][accessDate: 04-11-2010]
circular visceral muscle primordium[accessedResource: FBbt:00017015][accessDate: 04-11-2010]
circular visceral muscle primordium
splanchopleura
Primordium of the circular visceral muscle of the trunk. Becomes distinct from the rest of the trunk mesoderm by stage 11 when 2 distinct layers of trunk mesoderm are apparent, the inner of which is the circular visceral muscle primordium. By stage 12, these cells form a palisade consisting of a dorsal row an a ventral row of tightly packed cells. These cells adhere to the anterior and posterior midgut rudiments as they extend. During dorsal closure they spread out to encircle the midgut.
Primordium of the circular visceral muscle of the trunk. Becomes distinct from the rest of the trunk mesoderm by stage 11 when two distinct layers of trunk mesoderm are apparent, the inner of which is the circular visceral muscle primordium. By stage 12, these cells form a palisade consisting of a dorsal row an a ventral row of tightly packed cells. These cells adhere to the anterior and posterior midgut rudiments as they extend. During dorsal closure they spread out to encircle the midgut.
James Malone
FBbt:00017015
splanchopleura[accessedResource: FBbt:00017015][accessDate: 04-11-2010]
circular visceral mesoderm primordium
Primordium of the circular visceral muscle of the trunk. Becomes distinct from the rest of the trunk mesoderm by stage 11 when two distinct layers of trunk mesoderm are apparent, the inner of which is the circular visceral muscle primordium. By stage 12, these cells form a palisade consisting of a dorsal row an a ventral row of tightly packed cells. These cells adhere to the anterior and posterior midgut rudiments as they extend. During dorsal closure they spread out to encircle the midgut.[accessedResource: FBbt:00017015][accessDate: 04-11-2010]
FBbt:00005667
embryonic central brain pars intercerebralis
James Malone
carotid artery endothelium
Tomasz Adamusiak
Jie Zheng
HT-1197
HT1197
James Malone
Ele Holloway
malignant tumor of the germ cell[accessedResource: DOID:2994][accessDate: 04-11-2010]
GeneRIF:15467433
MSH:D009373
GeneRIF:16188233
GeneRIF:12163388
Germ cell neoplasms (morphologic abnormality)
Germ Cell Neoplasms
[M]Germ cell neoplasms (morphologic abnormality)
Tumor of the Germ Cell[accessedResource: NCIt:C3708][accessDate: 04-11-2010]
NEOPL GERM CELL EMBRYONAL[accessedResource: MSH:D009373][accessDate: 04-11-2010]
GeneRIF:15491742
GERM CELL EMBRYONIC NEOPL[accessedResource: MSH:D009373][accessDate: 04-11-2010]
Germ Cell Neoplasm[accessedResource: NCIt:C3708][accessDate: 04-11-2010]
GeneRIF:15896468
[M]Germ cell neoplasms (morphologic abnormality)[accessedResource: SNOMEDCT:189839002][accessDate: 04-11-2010]
Germinoma (morphologic abnormality)[accessedResource: SNOMEDCT:28307001][accessDate: 04-11-2010]
Tumor of the Germ Cell
[M]Germ cell neoplasms[accessedResource: SNOMEDCT:189839002][accessDate: 04-11-2010]
Embryonal Neoplasms
malignant tumor of the germ cell
Cancer, Embryonal
GeneRIF:12736724
Neoplasms, Germ Cell and Embryonic[accessedResource: MSH:D009373][accessDate: 04-11-2010]
Germ cell tumour[accessedResource: SNOMEDCT:402878003][accessDate: 04-11-2010]
SNOMEDCT:189839002
Germ cell neoplasm NOS (morphologic abnormality)
Germ cell tumor (disorder)[accessedResource: SNOMEDCT:402878003][accessDate: 04-11-2010]
[M]Germ cell neoplasm NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189854008][accessDate: 04-11-2010]
[M]Germ cell neoplasm NOS[accessedResource: SNOMEDCT:189854008][accessDate: 04-11-2010]
Neoplasm of Germ Cell
[M]Germ cell neoplasm NOS (morphologic abnormality)
germ cell tumor
NEOPL EMBRYONAL
Germ Cell Neoplasms[accessedResource: MSH:D009373][accessDate: 04-11-2010]
Tumors, Germ Cell
Neoplasms, Germ Cell and Embryonal
Cancer, Germ Cell
Cancers, Germ Cell
Cancer, Embryonal and Mixed
Germ Cell Tumors[accessedResource: MSH:D009373][accessDate: 04-11-2010]
Germ cell tumor, NOS[accessedResource: SNOMEDCT:28307001][accessDate: 04-11-2010]
Germ cell neoplasm (morphologic abnormality)
GeneRIF:14633588
Neoplasm, Embryonal
Embryonal Neoplasm[accessedResource: MSH:D009373][accessDate: 04-11-2010]
James Malone
GeneRIF:14555521
Neoplasm of the Germ Cell
Neoplasms, Germ Cell and Embryonic
Cancer, Germ Cell[accessedResource: MSH:D009373][accessDate: 04-11-2010]
Germ cell neoplasm
A cancer that is derived_from germ cells.
GeneRIF:12629412
GERM CELL EMBRYONIC NEOPL
GeneRIF:12727846
Neoplasms composed of primordial GERM CELLS of embryonic GONADS or of elements of the germ layers of the EMBRYO, MAMMALIAN. The concept does not refer to neoplasms located in the gonads or present in an embryo or FETUS.[accessedResource: MSH:D009373][accessDate: 04-11-2010]
GeneRIF:12824871
GeneRIF:15691383
Neoplasms, Embryonal and Mixed
Neoplasms composed of primordial GERM CELLS of embryonic GONADS or of elements of the germ layers of the EMBRYO, MAMMALIAN. The concept does not refer to neoplasms located in the gonads or present in an embryo or FETUS.
A cancer that is derived_from germ cells.[accessedResource: DOID:2994][accessDate: 04-11-2010]
NEOPL GERM CELL
Germinoma (morphologic abnormality)
Germ cell tumor, NOS
Tumor of Germ Cell
GeneRIF:15982323
GeneRIF:12777997
Tumor of Germ Cell[accessedResource: NCIt:C3708][accessDate: 04-11-2010]
Germ Cell Cancers[accessedResource: MSH:D009373][accessDate: 04-11-2010]
Neoplasm of the Germ Cell[accessedResource: NCIt:C3708][accessDate: 04-11-2010]
Neoplasms, Embryonal and Mixed[accessedResource: MSH:D009373][accessDate: 04-11-2010]
SNOMEDCT:402878003
Germ cell tumour
Germ cell tumor (disorder)
[M]Germ cell neoplasms
SNOMEDCT:28307001
NCIt:C3708
Germinoma
GERM CELL NEOPL[accessedResource: MSH:D009373][accessDate: 04-11-2010]
germinoma[accessedResource: DOID:2994][accessDate: 04-11-2010]
GeneRIF:12620992
Embryonal Cancer[accessedResource: MSH:D009373][accessDate: 04-11-2010]
Cancer, Embryonal and Mixed[accessedResource: MSH:D009373][accessDate: 04-11-2010]
DOID:2994
germ cell neoplasm (morphologic abnormality)[accessedResource: DOID:2994][accessDate: 04-11-2010]
Germ Cell and Embryonal Neoplasms[accessedResource: MSH:D009373][accessDate: 04-11-2010]
[M]Germ cell neoplasm NOS
Neoplasm of Germ Cell[accessedResource: NCIt:C3708][accessDate: 04-11-2010]
SNOMEDCT:115233005
Embryonal Neoplasms[accessedResource: MSH:D009373][accessDate: 04-11-2010]
germ cell neoplasm NOS (morphologic abnormality)[accessedResource: DOID:2994][accessDate: 04-11-2010]
NEOPL GERM CELL EMBRYONAL
Cancers, Embryonal[accessedResource: MSH:D009373][accessDate: 04-11-2010]
Embryonal Cancers
GeneRIF:15330164
SNOMEDCT:189854008
NEOPL EMBRYONAL[accessedResource: MSH:D009373][accessDate: 04-11-2010]
DNA sequencing
An assay in which -sequencing technology (e.g. Solexa/454) is used to determine NDNA sequence
DNA-seq
ArrayExpress Production Team
Malignant lymphoma (clinical)
GeneRIF:15889157
GeneRIF:12549480
malignant lymphoma NOS of unspecified site (disorder)[accessedResource: DOID:353][accessDate: 04-11-2010]
GeneRIF:14998493
GeneRIF:15692060
GeneRIF:14654791
GeneRIF:15640350
GeneRIF:15263076
GeneRIF:12082638
A general term for various neoplastic diseases of the lymphoid tissue.
Lymphoma (Hodgkin and Non-Hodgkin)
GeneRIF:12496417
GeneRIF:14702288
A malignant (clonal) proliferation of B- lymphocytes or T- lymphocytes which involves the lymph nodes, bone marrow and/or extranodal sites. This category includes Non-Hodgkin lymphomas and Hodgkin lymphomas.
GeneRIF:15744340
Malignant lymphoma NOS of unspecified site
Lymphomas[accessedResource: MSH:D008223][accessDate: 04-11-2010]
GeneRIF:12884297
Microglioma [obs]
Germinoblastic Sarcoma
Malignant lymphoma, no ICD-O subtype
SNOMEDCT:118600007
GeneRIF:15940251
GeneRIF:15743832
Lymphoma, Malignant
A cancer that affects lymphocytes that reside in the lymphatic system and in blood-forming organs.
GeneRIF:15226424
Lymphomas, Malignant
GeneRIF:15133473
Lymphomas, Malignant[accessedResource: MSH:D008223][accessDate: 04-11-2010]
Malignant lymphoma NOS of unspecified site[accessedResource: SNOMEDCT:188695001][accessDate: 04-11-2010]
Microglioma [obs][accessedResource: SNOMEDCT:21964009][accessDate: 04-11-2010]
GeneRIF:12688322
GeneRIF:12915884
GeneRIF:15356104
GeneRIF:12393693
Germinoblastomas
GeneRIF:12469325
GeneRIF:15668399
SNOMEDCT:188694002
GeneRIF:12145697
GeneRIF:12438221
GeneRIF:12555065
This is potentially too broad as well as overlaps with leukemia and should be obsoleted.
A malignant (clonal) proliferation of B- lymphocytes or T- lymphocytes which involves the lymph nodes, bone marrow and/or extranodal sites. This category includes Non-Hodgkin lymphomas and Hodgkin lymphomas.[accessedResource: NCIt:C3208][accessDate: 04-11-2010]
GeneRIF:15890690
Malignant lymphoma NOS[accessedResource: SNOMEDCT:188694002][accessDate: 04-11-2010]
Germinoblastic Sarcoma[accessedResource: MSH:D008223][accessDate: 04-11-2010]
Malignant lymphoma, no ICD-O subtype (morphologic abnormality)
GeneRIF:12539045
GeneRIF:12217802
GeneRIF:11720250
Malignant lymphoma (clinical)[accessedResource: SNOMEDCT:118600007][accessDate: 04-11-2010]
GeneRIF:14612522
GeneRIF:12569164
Lymphoma (Hodgkin's and Non-Hodgkin's)
GeneRIF:11937265
GeneRIF:12048235
Lymphoma, NOS[accessedResource: SNOMEDCT:21964009][accessDate: 04-11-2010]
GeneRIF:15551285
GeneRIF:12532453
Reticulolymphosarcoma[accessedResource: MSH:D008223][accessDate: 04-11-2010]
GeneRIF:15735694
Lymphoma (clinical)
GeneRIF:15562971
GeneRIF:14666612
GeneRIF:11985791
malignant lymphoma NOS (disorder)
GeneRIF:15265020
GeneRIF:14767575
A general term for various neoplastic diseases of the lymphoid tissue.[accessedResource: MSH:D008223][accessDate: 04-11-2010]
GeneRIF:15713979
Lymphomas
NCIt:C3208
GeneRIF:12351407
Malignant lymphoma (disorder)[accessedResource: SNOMEDCT:118600007][accessDate: 04-11-2010]
GeneRIF:11999550
Reticulolymphosarcoma NOS
Germinoblastomas[accessedResource: MSH:D008223][accessDate: 04-11-2010]
GeneRIF:15467748
DOID:353
Malignant lymphoma NOS of unspecified site (disorder)
Malignant lymphoma[accessedResource: SNOMEDCT:118600007][accessDate: 04-11-2010]
Malignant lymphoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:21964009][accessDate: 04-11-2010]
GeneRIF:15215324
Lymphoma (Non-Hodgkin)
SNOMEDCT:21964009
Lymphoma (Hodgkin's and Non-Hodgkin's)[accessedResource: DOID:353][accessDate: 04-11-2010]
GeneRIF:15325703
GeneRIF:14724650
GeneRIF:15677569
GeneRIF:12532332
GeneRIF:12721791
GeneRIF:11932403
Germinoblastic Sarcomas[accessedResource: MSH:D008223][accessDate: 04-11-2010]
Reticulolymphosarcoma NOS[accessedResource: DOID:353][accessDate: 04-11-2010]
Reticulolymphosarcoma
GeneRIF:15985538
GeneRIF:12149433
GeneRIF:11920179
GeneRIF:16108830
GeneRIF:11751994
Malignant lymphoma NOS (disorder)[accessedResource: SNOMEDCT:188694002][accessDate: 04-11-2010]
GeneRIF:12567186
GeneRIF:15522957
GeneRIF:15474489
Sarcomas, Germinoblastic
GeneRIF:12218099
GeneRIF:14691303
GeneRIF:15705798
GeneRIF:15126346
Lymphoma (clinical)[accessedResource: SNOMEDCT:118600007][accessDate: 04-11-2010]
SNOMEDCT:188695001
GeneRIF:12807718
GeneRIF:15223017
James Malone
GeneRIF:11836626
GeneRIF:11869933
Lymphoma (Hodgkin and Non-Hodgkin)[accessedResource: NCIt:C3208][accessDate: 04-11-2010]
Germinoblastoma
GeneRIF:15516976
GeneRIF:16201318
GeneRIF:12897143
GeneRIF:12208847
lymphoma
GeneRIF:15649253
GeneRIF:12967477
GeneRIF:12682649
GeneRIF:15902285
GeneRIF:15121848
GeneRIF:15569983
GeneRIF:16194892
Germinoblastoma[accessedResource: MSH:D008223][accessDate: 04-11-2010]
GeneRIF:14662861
Lymphoma, NOS
Malignant lymphoma, no ICD-O subtype[accessedResource: SNOMEDCT:21964009][accessDate: 04-11-2010]
GeneRIF:15160902
malignant lymphoma NOS
GeneRIF:11866986
GeneRIF:15716988
GeneRIF:15762053
malignant lymphoma (disorder)
GeneRIF:16277027
A cancer that affects lymphocytes that reside in the lymphatic system and in blood-forming organs.[accessedResource: DOID:353][accessDate: 04-11-2010]
GeneRIF:12604405
MSH:D008223
GeneRIF:12579309
Reticulolymphosarcomas[accessedResource: MSH:D008223][accessDate: 04-11-2010]
Reticulolymphosarcomas
NCI-H1694
James Malone
Ele Holloway
Tomasz Adamusiak
H1
PMID:18564034
MDAMB157
MDAMB-157
James Malone
A375
James Malone
Ele Holloway
An assay in which the transcriptome of a biological sample is analysed using a tiling path array.
transcription profiling by tiling array
HEL9217
James Malone
Ele Holloway
WM793-P2N1
James Malone
Ele Holloway
67NR
James Malone
Ele Holloway
Restrictive cardiomyopathy (disorder)[accessedResource: DOID:397][accessDate: 04-11-2010]
A type of heart disorder referring to the inability of the ventricles to fill with blood because the myocardium (heart muscle) stiffens and looses its flexibility. Causes include replacement of the myocardium with scar tissue, abnormal cellular infiltration of the myocardium, or deposition of a substance (e.g., amyloid) in the myocardium.[accessedResource: NCIt:C62798][accessDate: 04-11-2010]
Cardiomyopathy, constrictive[accessedResource: DOID:397][accessDate: 04-11-2010]
Cardiomyopathy, constrictive
A type of heart disorder referring to the inability of the ventricles to fill with blood because the myocardium (heart muscle) stiffens and looses its flexibility. Causes include replacement of the myocardium with scar tissue, abnormal cellular infiltration of the myocardium, or deposition of a substance (e.g., amyloid) in the myocardium.
restrictive cardiomyopathy
primary restrictive cardiomyopathy (disorder)
Restrictive cardiomyopathy (disorder)
Tomasz Adamusiak
primary restrictive cardiomyopathy (disorder)[accessedResource: DOID:397][accessDate: 04-11-2010]
NCIt:C62798
DOID:397
EM-2
EM2
James Malone
Ele Holloway
HT-29
James Malone
NCI Metathesaurus: C0085485
Erwinia carotovora infection
Pectobacterium carotovorum infection
James Malone
CHEBI:3764
Clc1ccccc1C(c1ccccc1)(c1ccccc1)n1ccnc1
1-(alpha-(2-Chlorophenyl)benzhydryl)imidazole
Mycelex (TN)
InChIKey=VNFPBHJOKIVQEB-UHFFFAOYAO
1-(o-Chloro-alpha,alpha-diphenylbenzyl)imidazole
C22H17ClN2
An imidazole that has formula C22H17ClN2.
1-[(2-chlorophenyl)(diphenyl)methyl]-1H-imidazole
clotrimazole
InChI=1/C22H17ClN2/c23-21-14-8-7-13-20(21)22(25-16-15-24-17-25,18-9-3-1-4-10-18)19-11-5-2-6-12-19/h1-17H
Lotrimin (TN)
http://www.ebi.ac.uk/efo/EFO_0001509
1-(o-Chlorotrityl)imidazole
James Malone
1-((2-Chlorophenyl)diphenylmethyl)-1H-imidazole
Mus musculus subspecies
Helen Parkinson
Chlorophibrinic acid
Chlorofibrinic acid
clofibric acid
Chlorfibrinic acid
Ele Holloway
2-(4-chlorophenoxy)-2-methylpropanoic acid
Clofibrinsaeure
acide clofibrique
http://www.ebi.ac.uk/efo/EFO_0002405
Clofibrate free acid
CHEBI:34648
PCIB
CC(C)(Oc1ccc(Cl)cc1)C(O)=O
InChI=1/C10H11ClO3/c1-10(2,9(12)13)14-8-5-3-7(11)4-6-8/h3-6H,1-2H3,(H,12,13)/f/h12H
alpha-(4-chlorophenoxy)-alpha-methylpropionic acid
acidum clofibricum
James Malone
2-(4-Chlorophenoxy)-2-methylpropionic acid
InChIKey=TXCGAZHTZHNUAI-XWKXFZRBCH
C10H11ClO3
Acide (p-chlorophenoxy)-2 methyl-2 propionique
2-(p-Chlorophenoxy)-2-methylpropionic acid
alpha-(p-chlorophenoxy)isobutyric acid
PCPIB
2-(p-Chlorophenoxy)isobutyric acid
CPIB
4-CPIB
acido clofibrico
BTO:0001129
Lobular organ the parenchyma of which has as its parts glandular acini which are continuous with the prostatic part of the urethra. Examples: There is only one prostate.
James Malone
EV:0100104
prostate gland
EMAPA:19287
prostate
MA:0000404
FMAID:9600
SAEL:87
MAT:0000078
A firm partly muscular partly glandular body that is situated about the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid.[accessedResource: BTO:0001129][accessDate: 04-11-2010]
A firm partly muscular partly glandular body that is situated about the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid.
prostate gland[accessedResource: BTO:0001129][accessDate: 04-11-2010]
DOID:4358
metastatic melanoma
Tomasz Adamusiak
Ele Holloway
skeleton component
Anatomical system consisting of multiple elements and tissues that provides physical support.
Set of bones in the entire body.
skeleton[accessedResource: MAT:0000032][accessDate: 04-11-2010]
Set of all bones
James Malone
skeleton
skeletal system[accessedResource: MAT:0000032][accessDate: 04-11-2010]
MA:0000018
Skeleton (in vivo)
FMAID:23875
skeleton component[accessedResource: MAT:0000032][accessDate: 04-11-2010]
EMAPA:17213
EHDAA:5047
MAT:0000032
Set of bones of body
Anatomical system consisting of multiple elements and tissues that provides physical support.[accessedResource: TAO:0000434][accessDate: 04-11-2010]
skeletal system
ZFA:0000434
skeleton structure
TAO:0000434
Set of all bones[accessedResource: FMAID:23875][accessDate: 04-11-2010]
Set of bones of body[accessedResource: FMAID:23875][accessDate: 04-11-2010]
Skeleton (in vivo)[accessedResource: FMAID:23875][accessDate: 04-11-2010]
CL:0000034
A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.
A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.[accessedResource: CL:0000034][accessDate: 04-11-2010]
stem cell
James Malone
MO_544
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#family_history_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#family_history_design[accessedResource: MO_544][accessDate: 04-11-2010]
family history design
Tomasz Adamusiak
HCC1359
James Malone
James Malone
HCC1428
head disease
disorder of head (disorder)[accessedResource: DOID:4149][accessDate: 04-11-2010]
The name of the pathology diagnosed in the organism from which the biomaterial was derived. The disease state is normal if no disease has been diagnosed. E.g Acute Lymphocytic Leukemia
James Malone
disorder of head (disorder)
DOID:4149
ZFS:0000031
pharyngula prim-25
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=4473197&type=germplasm
CS8581 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=4473197&type=germplasm
CS8581
James Malone
MAT:0000476
An anatomical modifier is a quality which inheres in an organism part.
anatomical modifier
James Malone
MIA Paca-2
James Malone
Ele Holloway
neuroblastoma cell line differentiated w/ retinoic acid
SK-N-SH_RA
blood component
NCI-H69
James Malone
Ele Holloway
venous system[accessedResource: MAT:0000037][accessDate: 04-11-2010]
Venous tree organ part
venous system
EV:0100031
Venous subtree
Vessels that carry blood to the heart.
BTO:0000234
FMAID:50723
MA:0000066
Venous subtree[accessedResource: FMAID:50723][accessDate: 04-11-2010]
vein
EHDAA:486
Venous vessel[accessedResource: FMAID:50723][accessDate: 04-11-2010]
Venous vessel
EMAPA:16240
Subdivision of venous tree (organ) which consists of branching sets of tubes (venous trunks) that form a tree; together with other venous trees (organ part), it constitutes a venous tree (organ). Examples: subclavian venous tree, jugular tree, extrahepatic portal tree, common iliac venous tree.
Vessels that carry blood to the heart.[accessedResource: ZFA:0000082][accessDate: 04-11-2010]
Any of the tubular branching vessels that carry blood from the capillaries toward the heart.
James Malone
TAO:0000082
XAO:0000115
ZFA:0000082
Any of the tubular branching vessels that carry blood from the capillaries toward the heart.[accessedResource: BTO:0000234][accessDate: 04-11-2010]
Venous tree organ part[accessedResource: FMAID:50723][accessDate: 04-11-2010]
MAT:0000037
1.4
James Malone
cardiac atrium
Heart Atria
atrial tissue
The paired upper chambers of the heart. The left atrium receives oxygenated blood from the pulmonary vein and pumps blood into the left ventricle. The right atrium receives venous deoxygenated blood from the entire body via the superior and inferior vena cavae and pumps blood into the right ventricle.[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
Atria, Cardiac
NCIt:C12728
obsolete_cardiac atrium
Atria of Heart
Atria of Heart[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
Atrium of Heart[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
atrium
Auricle of Heart
Heart Atria[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
The paired upper chambers of the heart. The left atrium receives oxygenated blood from the pulmonary vein and pumps blood into the left ventricle. The right atrium receives venous deoxygenated blood from the entire body via the superior and inferior vena cavae and pumps blood into the right ventricle.
Atrium of Heart
atrial tissue[accessedResource: BTO:0000903][accessDate: 10-05-2010]
atrial chamber
Cardiac Atrium[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
In the heart, the atrium is an upper chamber found on both sides of the heart. The left atrium receives red, oxygenated blood from the lungs by way of the pulmonary veins. The right atrium receives dark red blood from the other parts of the body.[accessedResource: BTO:0000903][accessDate: 10-05-2010]
Heart Atrium
In the heart, the atrium is an upper chamber found on both sides of the heart. The left atrium receives red, oxygenated blood from the lungs by way of the pulmonary veins. The right atrium receives dark red blood from the other parts of the body.
true
Heart Atrium[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
Auricle of Heart[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
BTO:0000903
Use atrium instead : EFO_0000277
Atria, Cardiac[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
Atrium[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
CL:0000352
epiblast stem cell
embryonic stem cell
A cell of the outer layer of a blastula that gives rise to the ectoderm after gastrulation.
A cell of the outer layer of a blastula that gives rise to the ectoderm after gastrulation.[accessedResource: CL:0000352][accessDate: 04-11-2010]
epiblast cell
James Malone
SKMES1
James Malone
Ele Holloway
XAO:0000012
telencephalon
EHDAA:3496
An enlarged anterior or upper part of the brain; especially: the expanded anterior portion of the brain that in higher mammals overlies the rest of the brain, consists of cerebral hemispheres and connecting structures, and is considered to be the seat of conscious mental processes.
The telencephalon is the name for a large region within the brain that is attributed many functions. Many people refer to it as the cerebrum; however, it is technically referred to as the telencephalon. As a more technical definition, the telencephalon refers to the cerebral hemispheres and other, smaller structures within the brain, although the telencephalon is one of the larger divisions (in terms of number). It is the anterior-most embryological division of the brain that develops from the prosencephalon. The telencephalon is composed of the following sub-regions; Limbic system; Cerebral cortex or cortices of the cerebral hemispheres, Basal ganglia, Olfactory bulb. The telencephalon comprises what most people think of as the "brain." It lies on top of the brainstem and is the largest and most well-developed of the five major divisions of the brain. The telencephalon is the newest structure in the phylogenetic sense, with mammals having the largest and most well-developed among all species. It emerges from the prosencephalon, the first of three vesicles that form from the embryonic neural tube (Christine Fennema-Notestine).[accessedResource: NIFSTD:birnlex_1115][accessDate: 04-11-2010]
Tomasz Adamusiak
EMAPA:16910
MAT:0000421
TAO:0000079
ZFA:0000079
cerebrum[accessedResource: BTO:0000239][accessDate: 04-11-2010]
Communicating branch of phrenic nerve to internal thoracic plexus[accessedResource: FMAID:6200][accessDate: 04-11-2010]
The anterior and dorsal forebrain neuromere. In ray-finned fishes and most pronounced in teleosts the roof plate of the embryonic telencephalon extends laterally with the effect that the paired alar plates forming the hemispheric walls roll out lateroventrally in a process called eversion. This is unlike the development in other vertebrate groups. From Neuroanatomy of the Zebrafish Brain.
The anterior and dorsal forebrain neuromere, includes the olfactory bulb. Kimmel et al, 1995.
The anterior and dorsal forebrain neuromere, includes the olfactory bulb. Kimmel et al, 1995.[accessedResource: TAO:0000079][accessDate: 04-11-2010]
FMAID:6200
NIFSTD:birnlex_1115
The telencephalon is the name for a large region within the brain that is attributed many functions. Many people refer to it as the cerebrum; however, it is technically referred to as the telencephalon. As a more technical definition, the telencephalon refers to the cerebral hemispheres and other, smaller structures within the brain, although the telencephalon is one of the larger divisions (in terms of number). It is the anterior-most embryological division of the brain that develops from the prosencephalon. The telencephalon is composed of the following sub-regions; Limbic system; Cerebral cortex or cortices of the cerebral hemispheres, Basal ganglia, Olfactory bulb. The telencephalon comprises what most people think of as the "brain." It lies on top of the brainstem and is the largest and most well-developed of the five major divisions of the brain. The telencephalon is the newest structure in the phylogenetic sense, with mammals having the largest and most well-developed among all species. It emerges from the prosencephalon, the first of three vesicles that form from the embryonic neural tube (Christine Fennema-Notestine).
cerebrum
Communicating branch of phrenic nerve to internal thoracic plexus
The anterior and dorsal forebrain neuromere. In ray-finned fishes and most pronounced in teleosts the roof plate of the embryonic telencephalon extends laterally with the effect that the paired alar plates forming the hemispheric walls roll out lateroventrally in a process called eversion. This is unlike the development in other vertebrate groups. From Neuroanatomy of the Zebrafish Brain.[accessedResource: ZFA:0000079][accessDate: 04-11-2010]
BTO:0000239
An enlarged anterior or upper part of the brain; especially: the expanded anterior portion of the brain that in higher mammals overlies the rest of the brain, consists of cerebral hemispheres and connecting structures, and is considered to be the seat of conscious mental processes.[accessedResource: BTO:0000239][accessDate: 04-11-2010]
MFO:0002300
James Malone
MA:0000183
GM07022
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158646&type=germplasm
CS57622 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158646&type=germplasm
CS57622
James Malone
GRO:0005429
James Malone
BTO:0000039
PO:0020123
MAT:0000357
root cap
A thimble-shaped group of cells found at the tip of roots; it functions to protect the meristem.
A thimble-shaped group of cells found at the tip of roots; it functions to protect the meristem.[accessedResource: BTO:0000039][accessDate: 04-11-2010]
GRO:0005429[accessedResource: BTO:0000039][accessDate: 04-11-2010]
renal Medullary carcinoma[accessedResource: DOID:4464][accessDate: 04-11-2010]
Carcinoma of the Renal Collecting Duct[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
SNOMEDCT:128669006
Kidney Collecting Duct Carcinoma
Carcinoma of the Collecting Ducts of Bellini
Collecting duct carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:128669006][accessDate: 04-11-2010]
Carcinoma of Collecting Ducts of Bellini
Carcinoma of the Renal Collecting Duct
Carcinoma of Kidney Collecting Duct
Tomasz Adamusiak
Renal carcinoma, collecting duct type
Carcinoma of the Kidney Collecting Duct[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
Renal Collecting Duct Carcinoma
Renal carcinoma, collecting duct type[accessedResource: SNOMEDCT:128669006][accessDate: 04-11-2010]
Carcinoma of Kidney Collecting Duct[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
Carcinoma of Renal Collecting Duct[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
Carcinoma of Collecting Ducts of Bellini[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
Collecting duct carcinoma is a renal cell carcinoma described as a rare and aggressive type of renal cell carcinoma. The cancerous cells form irregular tubes inside the tumor. Collecting duct carcinoma is more common among young people and unfortunately is diagnosed in most cases when the cancer has metastasized (spread inside the body).[accessedResource: DOID:4464][accessDate: 04-11-2010]
NCIt:C6194
Carcinoma of the Collecting Ducts of Bellini[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
Carcinoma of Renal Collecting Duct
renal Medullary carcinoma
collecting duct carcinoma
Also known as collecting duct carcinoma, this is a rare type of renal carcinoma. It arises from the collecting ducts of the renal medulla, and most authors suggest that this is an aggressive tumor.[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
Renal Collecting Duct Carcinoma[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
Carcinoma of the Kidney Collecting Duct
Bellini Duct Carcinoma
Bellini duct carcinoma[accessedResource: SNOMEDCT:128669006][accessDate: 04-11-2010]
Also known as collecting duct carcinoma, this is a rare type of renal carcinoma. It arises from the collecting ducts of the renal medulla, and most authors suggest that this is an aggressive tumor.
DOID:4464
Collecting duct carcinoma is a renal cell carcinoma described as a rare and aggressive type of renal cell carcinoma. The cancerous cells form irregular tubes inside the tumor. Collecting duct carcinoma is more common among young people and unfortunately is diagnosed in most cases when the cancer has metastasized (spread inside the body).
Kidney Collecting Duct Carcinoma[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
Collecting duct carcinoma (morphologic abnormality)
ArrayExpress production team
An assay in which changes in DNA sequence copy number are analysed using a microarray. For example the analysis of LOH in tumor cells vs a non diseased sample or the comparison of clinical isolated of disease causing bacteria.
comparative genomic hybridization by array
James Malone
MO_78
An irregularity in the number or structure of chromosomes, usually in the form of a gain (duplication), loss (deletion), exchange (translocation), or alteration in sequence (inversion) of genetic material.
Jie Zheng
true
Tomasz Adamusiak
chromosomal aberration
ChromosomalAberration
ChromosomalAberration[accessedResource: MO_78][accessDate: 04-11-2010]
The probability that an event will occur generally with unfavorable outcome.
risk status
James Malone
http://jaxmice.jax.org/strain/009269.html
ILSXISS46/TejJ
Tomasz Adamusiak
CL:0000100
motoneuron[accessedResource: CL:0000100][accessDate: 10-05-2010]
An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.[accessedResource: CL:0000100][accessDate: 10-05-2010]
motor neuron
James Malone
1.8
obsolete_motoneuron
An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.
motoneuron
BTO:0000312
duplicate deprecated in favour of motor neurone
A neuron with a motor function; an efferent neuron conveying motor impulses.[accessedResource: BTO:0000312][accessDate: 10-05-2010]
medial motoneuron
lateral motoneuron
A neuron with a motor function; an efferent neuron conveying motor impulses.
true
motor neuron[accessedResource: CL:0000100][accessDate: 10-05-2010]
CHEBI:31593
http://www.ebi.ac.uk/efo/EFO_0002407
fasudil hydrochloride
James Malone
Ele Holloway
TH-1
Cardiomyopathies, Hypertrophic[accessedResource: MSH:D002312][accessDate: 04-11-2010]
GeneRIF:12135130
GeneRIF:11853553
A form of CARDIAC MUSCLE disease, characterized by left and/or right ventricular hypertrophy (HYPERTROPHY, LEFT VENTRICULAR; HYPERTROPHY, RIGHT VENTRICULAR), frequent asymmetrical involvement of the HEART SEPTUM, and normal or reduced left ventricular volume. Risk factors include HYPERTENSION; AORTIC STENOSIS; and gene MUTATION; (FAMILIAL HYPERTROPHIC CARDIOMYOPATHY).[accessedResource: MSH:D002312][accessDate: 04-11-2010]
hypertrophic cardiomyopathy
Idiopathic Hypertrophic Subvalvular Stenosis[accessedResource: MSH:D002312][accessDate: 04-11-2010]
Asymmetric Septal Hypertrophies[accessedResource: MSH:D002312][accessDate: 04-11-2010]
IHSS[accessedResource: MSH:D002312][accessDate: 04-11-2010]
Obstructive cardiomyopathy
hyper. obst. cardiomyopathy
primary hypertrophic cardiomyopathy (disorder) [Ambiguous]
SUBVALV STENOSIS[accessedResource: MSH:D002312][accessDate: 04-11-2010]
IHSSs[accessedResource: MSH:D002312][accessDate: 04-11-2010]
primary hypertrophic cardiomyopathy (disorder) [Ambiguous][accessedResource: DOID:11984][accessDate: 04-11-2010]
GeneRIF:15698845
GeneRIF:12642359
GeneRIF:12810613
HOCM - Hypertrophic obstructive cardiomyopathy
HCM - Hypertrophic cardiomyopathy
Cardiomyopathies, Hypertrophic
Hypertrophic Obstructive Cardiomyopathy
Hypertrophic cardiomyopathy (disorder)[accessedResource: SNOMEDCT:233873004][accessDate: 04-11-2010]
IHSS
Cardiomyopathies, Hypertrophic Obstructive[accessedResource: MSH:D002312][accessDate: 04-11-2010]
HYPERTR OBSTR CARDIOMYOP[accessedResource: ICD9:425.1][accessDate: 04-11-2010]
SNOMEDCT:233873004
ICD9:425.1
SUBVALV STENOSIS
GeneRIF:15056834
GeneRIF:12386147
DOID:11984
GeneRIF:15317754
Primary hypertrophic cardiomyopathy[accessedResource: SNOMEDCT:233873004][accessDate: 04-11-2010]
HOCM - Hypertrophic obstructive cardiomyopathy[accessedResource: SNOMEDCT:45227007][accessDate: 04-11-2010]
Hypertrophic cardiomyopathy (disorder)
A condition in which the myocardium is hypertrophied without an obvious cause. The hypertrophy is generally asymmetric and may be associated with obstruction of the ventricular outflow tract.[accessedResource: NCIt:C34449][accessDate: 04-11-2010]
GeneRIF:11955864
GeneRIF:12376254
James Malone
GeneRIF:12538779
GeneRIF:15737656
IHSSs
GeneRIF:12110947
Asymmetric Septal Hypertrophies
hypertrophic myocardiopathy[accessedResource: DOID:11984][accessDate: 04-11-2010]
GeneRIF:14645200
HYPERTR OBSTR CARDIOMYOP
Idiopathic Hypertrophic Subaortic Stenosis[accessedResource: MSH:D002312][accessDate: 04-11-2010]
GeneRIF:12474143
Hypertrophic obstructive cardiomyopathy (disorder)
A condition in which the myocardium is hypertrophied without an obvious cause. The hypertrophy is generally asymmetric and may be associated with obstruction of the ventricular outflow tract.
hyper. obst. cardiomyopathy[accessedResource: DOID:11984][accessDate: 04-11-2010]
SNOMEDCT:45227007
Idiopathic Hypertrophic Subvalvular Stenosis
Idiopathic Hypertrophic Subaortic Stenosis
A form of CARDIAC MUSCLE disease, characterized by left and/or right ventricular hypertrophy (HYPERTROPHY, LEFT VENTRICULAR; HYPERTROPHY, RIGHT VENTRICULAR), frequent asymmetrical involvement of the HEART SEPTUM, and normal or reduced left ventricular volume. Risk factors include HYPERTENSION; AORTIC STENOSIS; and gene MUTATION; (FAMILIAL HYPERTROPHIC CARDIOMYOPATHY).
GeneRIF:12169652
SUBVALV STENOSIS IDIOPATHIC HYPERTROPHIC
MSH:D002312
GeneRIF:12628722
GeneRIF:15856146
Septal Hypertrophy, Asymmetric[accessedResource: MSH:D002312][accessDate: 04-11-2010]
NCIt:C34449
GeneRIF:15118286
GeneRIF:12754703
GeneRIF:15314809
hypertrophic myocardiopathy
HCM - Hypertrophic cardiomyopathy[accessedResource: SNOMEDCT:233873004][accessDate: 04-11-2010]
GeneRIF:16288990
GeneRIF:15673802
Obstructive Cardiomyopathies, Hypertrophic
Obstructive Cardiomyopathy, Hypertrophic[accessedResource: MSH:D002312][accessDate: 04-11-2010]
GeneRIF:16004897
hypertrophic obstructive cardiomyopathy (disorder)[accessedResource: DOID:11984][accessDate: 04-11-2010]
IDIOPATHIC HYPERTROPHIC SUBVALV STENOSIS[accessedResource: MSH:D002312][accessDate: 04-11-2010]
Primary hypertrophic cardiomyopathy
Hypertrophy, Asymmetric Septal
GeneRIF:15582318
GeneRIF:12705874
Obstructive cardiomyopathy[accessedResource: SNOMEDCT:45227007][accessDate: 04-11-2010]
immunosuppressant
inmunosupresor
immunosuppressive agent
immunosuppressive agents
CHEBI:35705
James Malone
An agent that suppresses immune function by one of several mechanisms of action. Classical cytotoxic immunosuppressants act by inhibiting DNA synthesis. Others may act through activation of T-cells or by inhibiting the activation of helper cells. In addition, an immunosuppressive agent is a role played by a compound which is exhibited by a capability to diminish the extent and/or voracity of an immune response.
http://www.ebi.ac.uk/efo/EFO_0001853
http://www.ebi.ac.uk/efo/EFO_0001546
InChI=1/C5H10N2O3/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2,(H2,7,8)(H,9,10)/f/h9H,7H2
NC(CCC(N)=O)C(O)=O
Glutaminsaeure-5-amid
CHEBI:28300
2,5-diamino-5-oxopentanoic acid
Glutamin
C5H10N2O3
glutamic acid gamma-amide
2-Aminoglutaramic acid
Hgln
An alpha-amino acid that has formula C5H10N2O3.
2-amino-4-carbamoylbutanoic acid
glutamine
InChIKey=ZDXPYRJPNDTMRX-HDAMEQSMCZ
MCF-7aro
James Malone
Ele Holloway
FMA:77614
ventral striatum
James Malone
This should become a material entity with the role of environment
true
environment factor
The external elements and conditions which surround, influence, and affect the life and development of an organism or population.
environmental factor
James Malone
ILSXISS79/TejJ
Tomasz Adamusiak
WBls:0000027
The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch.
L2 larva
James Malone
Infections with bacteria of the genus PSEUDOMONAS.
PSEUDOMONAS INFECT[accessedResource: MSH:D011552][accessDate: 04-11-2010]
GeneRIF:14734763
Bacterial infection due to Pseudomonas
James Malone
SNOMEDCT:63398001
Pseudomonas infectious disease
MSH:D011552
Bacterial infection due to Pseudomonas[accessedResource: SNOMEDCT:63398001][accessDate: 04-11-2010]
Bacterial infectious disease due to Pseudomonas (disorder)
GeneRIF:15950065
GeneRIF:15375173
Bacterial infection due to Pseudomonas (disorder)[accessedResource: SNOMEDCT:63398001][accessDate: 04-11-2010]
GeneRIF:11906036
Infections, Pseudomonas
GeneRIF:14695625
Infections with bacteria of the genus PSEUDOMONAS.[accessedResource: MSH:D011552][accessDate: 04-11-2010]
Pseudomonas infectious disease[accessedResource: DOID:2903][accessDate: 04-11-2010]
DOID:2903
Bacterial infectious disease due to Pseudomonas (disorder)[accessedResource: DOID:2903][accessDate: 04-11-2010]
Pseudomonas infection
GeneRIF:16299282
Pseudomonas Infections[accessedResource: MSH:D011552][accessDate: 04-11-2010]
INFECT PSEUDOMONAS
Bacterial infection due to Pseudomonas (disorder)
FBbt:00005831
dorsal imaginal precursor
James Malone
FBbt:00001060
embryonic brain
James Malone
Tomasz Adamusiak
Diabetes, Type 2[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
Type II Diabetes[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
Non-Insulin Dependent Diabetes[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
NIDDM
Type 2 Diabetes Mellitus
DOID:9352
Diabetes, Type 2
A type of diabetes mellitus that is characterized by insulin resistance or desensitization and increased blood glucose levels. This is a chronic disease that can develop gradually over the life of a patient and can be linked to both environmental factors and heredity.
Type 2 Diabetes Mellitus Non-Insulin Dependent[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
Type 2 Diabetes Mellitus[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
non-insulin-dependent diabetes mellitus
T2DM - Type 2 Diabetes mellitus
Type II Diabetes
NCIt:C26747
Adult-Onset Diabetes
T2DM - Type 2 Diabetes mellitus[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
Type 2 Diabetes Mellitus Non-Insulin Dependent
Adult-Onset Diabetes[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
A type of diabetes mellitus that is characterized by insulin resistance or desensitization and increased blood glucose levels. This is a chronic disease that can develop gradually over the life of a patient and can be linked to both environmental factors and heredity.[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
Non-Insulin Dependent Diabetes
type II diabetes mellitus
NIDDM[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
Non-Insulin Dependent Diabetes Mellitus[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
MO_822
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_cycle_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_cycle_design[accessedResource: MO_822][accessDate: 04-11-2010]
cell cycle design
Tomasz Adamusiak
CaOv3
James Malone
Ele Holloway
FMAID:24984
Posterior part of leg
Posterior part of leg[accessedResource: FMAID:24984][accessDate: 04-11-2010]
calf
Tomasz Adamusiak
MDAMB415
James Malone
GM06990 is a cell line derived from some lymphoblastoid cells from a CEPH familiy of UTAH/MORMON ethnicity. It is supplied by Corriell under catalogue number GM06990.
GM06990
An assay in which the transcriptome of a biological sample is analysed by serial analysis of gene expression (SAGE)
transcription profiling by SAGE
Anna Farne
GM12815
James Malone
MO_901
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#dye_swap_replicate
A die swap replicate is a replicate role which is borne by one of a pair of replicate assays in which LabeledExtracts derived from the same BioMaterial used for both assays (e.g., a hybridization or a 2-D gel run) differ only in that the dyes used for labeling have been reversed, e.g., assay 1: A-Cy3 vs. B-Cy5, and assay 2: A-Cy5 vs. B-Cy3. The purpose of using dye-swap replicate pairs is to assess or remove dye-specific biases from the combined experimental results.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#dye_swap_replicate[accessedResource: MO_901][accessDate: 04-11-2010]
die swap replicate
James Malone
MO_643
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#software_variation_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#software_variation_design[accessedResource: MO_643][accessDate: 04-11-2010]
software variation design
Tomasz Adamusiak
Phenobarbituric Acid
Phenobarbitol
5-Phenyl-5-ethylbarbituric acid
CHEBI:8069
5-Ethyl-5-phenyl-pyrimidine-2,4,6-trione
http://www.ebi.ac.uk/efo/EFO_0001591
A barbiturate that has formula C12H12N2O3.
James Malone
Phenylethylbarbituric Acid
CCC1(C(=O)NC(=O)NC1=O)c1ccccc1
5-Ethyl-5-phenylbarbituric acid
InChI=1/C12H12N2O3/c1-2-12(8-6-4-3-5-7-8)9(15)13-11(17)14-10(12)16/h3-7H,2H2,1H3,(H2,13,14,15,16,17)/f/h13-14H
PHENYLETHYLMALONYLUREA
Luminal
Phenylethylbarbitursaeure
Phenylaethylbarbitursaeure
Barbituric acid substituted at C-5 by ethyl and phenyl groups.
Phenylethylbarbiturate
Phenobarbitone
InChIKey=DDBREPKUVSBGFI-KGCNKATMCV
C12H12N2O3
phenobarbital
5-ethyl-5-phenyl-2,4,6(1H,3H,5H)-pyrimidinetrione
NCIt:C43394
Native Hawaiian
Denotes a person having origins in any of the original peoples of Hawaii, a person from there, or their descendants elsewhere.
Native Hawaiian[accessedResource: NCIt:C43394][accessDate: 04-11-2010]
Denotes a person having origins in any of the original peoples of Hawaii, a person from there, or their descendants elsewhere.[accessedResource: NCIt:C43394][accessDate: 04-11-2010]
Hawaiian
Tomasz Adamusiak
SELENATE ION
O4Se
[SeO4](2-)
tetraoxidoselenate(2-)
selenate
InChIKey=QYHFIVBSNOWOCQ-VMRORRRTCU
InChI=1/H2O4Se/c1-5(2,3)4/h(H2,1,2,3,4)/p-2/fO4Se/q-2
[O-][Se]([O-])(=O)=O
A selenium oxoanion that has formula O4Se.
spinocerebellar ataxia type 17
Tomasz Adamusiak
fins[accessedResource: TAO:0000108][accessDate: 04-11-2010]
fins
ZFA:0000108
XAO:0000002
MAT:0000087
Surface structure involved in locomotion.
OntologyMappingImporter following MAT:0000087
Surface structure involved in locomotion.[accessedResource: TAO:0000108][accessDate: 04-11-2010]
fin
MFO:0079180
TAO:0000108
James Malone
RNAi
The act of alteration or modification of a cell e.g. RNAi
cellular modification
James Malone
CHL1
James Malone
Ele Holloway
SNOMEDCT:281170005
Arrhythmogenic right ventricular dysplasia
Arrhythmogenic right ventricular cardiomyopathy (disorder)
Arrhythmogenic right ventricular dysplasia[accessedResource: SNOMEDCT:281170005][accessDate: 04-11-2010]
Arrhythmogenic right ventricular cardiomyopathy (disorder)[accessedResource: SNOMEDCT:281170005][accessDate: 04-11-2010]
arrhythmogenic right ventricular cardiomyopathy
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158757&type=germplasm
CS57733 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158757&type=germplasm
CS57733
James Malone
Mucosa of tongue[accessedResource: FMAID:54807][accessDate: 04-11-2010]
FMAID:54807
Mucous membrane of tongue
Lingual mucosa[accessedResource: FMAID:54807][accessDate: 04-11-2010]
Tomasz Adamusiak
Mucosa of tongue
tongue mucosa
Mucous membrane of tongue[accessedResource: FMAID:54807][accessDate: 04-11-2010]
Jie Zheng
Lingual mucosa
James Malone
A material entity is an entity that exists in full during the length of time of its existence, persists through this time while maintaining its identity and has no temporal parts. For example a heart, a human, a fly, a microarray.
material entity
An independent continuant [snap:IndependentContinuant] that is spatially extended whose identity is independent of that of other entities and can be maintained through time. Note: Material entity [snap:MaterialEntity] subsumes object [snap:Object], fiat object part [snap:FiatObjectPart], and object aggregate [snap:ObjectAggregate], which assume a three level theory of granularity, which is inadequate for some domains, such as biology.
true
sample factor
http://www.ebi.ac.uk/efo/EFO_0001434
A heart, a human, a fly, a microarray.
use EFO_0000527
obsolete_hemopoietic progenitor cell
true
hematopoietic stem cell[accessedResource: CL:0000037][accessDate: 10-05-2010]
hematopoietic progenitor cell[accessedResource: CL:0000037][accessDate: 10-05-2010]
hemopoietic progenitor cell
CL:0000037
hematopoietic progenitor cell
James Malone
hemopoietic progenitor cell[accessedResource: CL:0000037][accessDate: 10-05-2010]
colony forming unit hematopoietic
A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.
HSC
A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.[accessedResource: CL:0000037][accessDate: 10-05-2010]
hematopoietic stem cell
hemopoietic stem cell[accessedResource: CL:0000037][accessDate: 10-05-2010]
colony forming unit hematopoietic[accessedResource: CL:0000037][accessDate: 10-05-2010]
hemopoietic stem cell
HSC[accessedResource: CL:0000037][accessDate: 10-05-2010]
Intestinal Gastric Adenocarcinoma
Intestinal Adenocarcinoma of the Stomach
Intestinal Adenocarcinoma of Stomach[accessedResource: NCIt:C9157][accessDate: 04-11-2010]
Intestinal Stomach Adenocarcinoma[accessedResource: NCIt:C9157][accessDate: 04-11-2010]
An adenocarcinoma of the stomach arising on a background of intestinal metaplasia. Microscopically, it is characterized by a glandular pattern and it closely resembles a colonic adenocarcinoma. Grossly, it tends to be nodular, polypoid or ulcerated.
Intestinal Gastric Adenocarcinoma[accessedResource: NCIt:C9157][accessDate: 04-11-2010]
An adenocarcinoma of the stomach arising on a background of intestinal metaplasia. Microscopically, it is characterized by a glandular pattern and it closely resembles a colonic adenocarcinoma. Grossly, it tends to be nodular, polypoid or ulcerated.[accessedResource: NCIt:C9157][accessDate: 04-11-2010]
gastric intestinal type adenocarcinoma
Intestinal Stomach Adenocarcinoma
Intestinal Adenocarcinoma of the Stomach[accessedResource: NCIt:C9157][accessDate: 04-11-2010]
NCIt:C9157
Intestinal Adenocarcinoma of Stomach
James Malone
DOID:8026
CCc1c(CC)c2C=C3C(CCCO)=C(C)C4=[N]3[Gd]356(OC(C)=O)(OC(C)=O)[N](=CC7=[N]3C(=Cc1n25)C(CCCO)=C7C)c1cc(OCCOCCOCCOC)c(OCCOCCOCCOC)cc1[N]6=C4
InChI=1/C48H66N5O10.2C2H4O2.Gd/c1-7-35-36(8-2)40-28-42-38(12-10-14-55)34(4)46(53-42)32-50-44-30-48(63-26-24-61-22-20-59-18-16-57-6)47(62-25-23-60-21-19-58-17-15-56-5)29-43(44)49-31-45-33(3)37(11-9-13-54)41(52-45)27-39(35)51-40;2*1-2(3)4;/h27-32,54-55H,7-26H2,1-6H3;2*1H3,(H,3,4);/q-1;;;+3/p-2/b39-27-,40-28-,41-27-,42-28-,45-31-,46-32-,49-31+,49-43+,50-32+,50-44+;;;/fC48H66N5O10.2C2H3O2.Gd/qm;2*-1;m
CHEBI:50161
InChIKey=VAZLWPAHMORDGR-MPNKMPCTDC
Gd-Tex
C52H72GdN5O14
bis(acetato-kappaO){3,3'-[4,5-diethyl-16,17-bis{2-[2-(2-methoxyethoxy)ethoxy]ethoxy}-10,23-dimethyl-13,20,25,26,27-pentaazapentacyclo[20.2.1.1(3,6).1(8,11).0(14,19)]heptacosa-1,3,5,7,9,11(26),12,14,16,18,20,22(25),23-tridecaene-9,24-diyl-kappa(5)N(13),N(20),N(25),N(26),N(27)]dipropan-1-olato}gadolinium
A metallotexaphyrin that has formula C52H72GdN5O14.
Xcytrin
Gd texaphyrin
MGd
(PB-7-11-233'2'4)-bis(acetato-kappaO)(9,10-diethyl-20,21-bis(2-(2-(2-methoxyethoxy)ethoxy)ethoxy)-4,15-dimethyl-8,11-imino-3,6:16,13-dinitrilo-1,18-benzodiazacycloeicosine-5,14-dipropanolato-kappaN(1),kappaN(18),kappaN(23),kappaN(24),kappaN(25))gadolinium
motexafin gadolinium
http://www.ebi.ac.uk/efo/EFO_0001575
gadolinium texaphyrin
os tarsi tibiale
James Malone
ankle bone[accessedResource: BTO:0002354][accessDate: 04-11-2010]
talus[accessedResource: BTO:0002354][accessDate: 04-11-2010]
astragalus
NCIt:C32078
Ankle Joint
astragalus[accessedResource: BTO:0002354][accessDate: 04-11-2010]
Ankle Joint[accessedResource: NCIt:C32078][accessDate: 04-11-2010]
BTO:0002354
os tarsi tibiale[accessedResource: BTO:0002354][accessDate: 04-11-2010]
A gliding joint between the distal ends of the tibia and fibula and the proximal end of the talus.
ankle bone
A gliding joint between the distal ends of the tibia and fibula and the proximal end of the talus.[accessedResource: NCIt:C32078][accessDate: 04-11-2010]
astragaloid bone[accessedResource: BTO:0002354][accessDate: 04-11-2010]
ankle
astragaloid bone
talus
The highest of the tarsal bones and the one that articulates with the tibia and fibula to form the ankle joint.
The highest of the tarsal bones and the one that articulates with the tibia and fibula to form the ankle joint.[accessedResource: BTO:0002354][accessDate: 04-11-2010]
2.1
true
obsolete_GM12891
James Malone
duplicate with EFO_0002785
1.8
true
obsolete_HT1080
James Malone
Ele Holloway
duplicate with EFO_0002059
GeneRIF:15687131
Increased VASCULAR RESISTANCE in the PULMONARY CIRCULATION, usually secondary to HEART DISEASES or LUNG DISEASES.
GeneRIF:15979050
GeneRIF:15353500
A syndrome with pathological changes in the pulmonary arteries and impaired PULMONARY CIRCULATION that can be the result of PULMONARY HYPERTENSION. Ayerza syndrome is characterized by slowly developing ASTHMA; BRONCHITIS; DYSPNEA; and CYANOSIS in association with POLYCYTHEMIA.
Syndrome, Ayerza[accessedResource: MSH:D006976][accessDate: 04-11-2010]
GeneRIF:15761249
PULM HYPERTENSION
GeneRIF:15286002
GeneRIF:16215633
GeneRIF:15242552
GeneRIF:15217799
GeneRIF:15505094
GeneRIF:14507115
pulmonary hypertension (disorder)[accessedResource: DOID:6432][accessDate: 04-11-2010]
GeneRIF:14970910
GeneRIF:14759414
DOID:6432
SNOMEDCT:70995007
GeneRIF:12714563
pulmonary hypertension (disorder)
Syndrome, Ayerza-Arrilaga[accessedResource: MSH:D006976][accessDate: 04-11-2010]
GeneRIF:12740218
GeneRIF:14684682
GeneRIF:15516492
GeneRIF:15358862
GeneRIF:15725412
pulmonary hypertension
GeneRIF:16113050
GeneRIF:12244304
GeneRIF:15824199
GeneRIF:12391106
GeneRIF:16236896
GeneRIF:12750401
GeneRIF:12909593
GeneRIF:12358323
GeneRIF:12016106
GeneRIF:12547729
GeneRIF:15192043
Ayerzas Syndrome
GeneRIF:15031260
GeneRIF:15295086
GeneRIF:14530202
GeneRIF:12391278
Ayerza's Syndrome[accessedResource: MSH:D006976][accessDate: 04-11-2010]
Pulmonary hypertension, NOS
Syndrome, Ayerza-Arrilaga
A syndrome with pathological changes in the pulmonary arteries and impaired PULMONARY CIRCULATION that can be the result of PULMONARY HYPERTENSION. Ayerza syndrome is characterized by slowly developing ASTHMA; BRONCHITIS; DYSPNEA; and CYANOSIS in association with POLYCYTHEMIA.[accessedResource: MSH:D006976][accessDate: 04-11-2010]
GeneRIF:14726295
GeneRIF:15146952
GeneRIF:15155268
Pulmonary hypertension, NOS[accessedResource: SNOMEDCT:70995007][accessDate: 04-11-2010]
Increased VASCULAR RESISTANCE in the PULMONARY CIRCULATION, usually secondary to HEART DISEASES or LUNG DISEASES.[accessedResource: MSH:D006976][accessDate: 04-11-2010]
GeneRIF:12896876
GeneRIF:16085672
Ayerza Syndrome
GeneRIF:15520307
GeneRIF:12835224
GeneRIF:14512515
James Malone
GeneRIF:12177436
MSH:D006976
GeneRIF:15364894
GeneRIF:15618545
GeneRIF:15331358
HYPERTENSION PULM[accessedResource: MSH:D006976][accessDate: 04-11-2010]
GeneRIF:14715505
GeneRIF:15684702
PHT - Pulmonary hypertension
PHT - Pulmonary hypertension[accessedResource: SNOMEDCT:70995007][accessDate: 04-11-2010]
ssMCF7
James Malone
Ele Holloway
NCIt:C15197
case control study
Tomasz Adamusiak
James Malone
NHEK
lungs
EMAPA:16728
SAEL:62
James Malone
One of the usually paired compound saccular thoracic organs that constitute the basic respiratory organ of air-breathing vertebrates.[accessedResource: BTO:0000763][accessDate: 04-11-2010]
lungs[accessedResource: MAT:0000135][accessDate: 04-11-2010]
EV:0100042
MAT:0000135
lung
XAO:0000119
Lobular organ which has as its parts alveoli connected to the tracheobronchial tree. Examples: There are only two instances, right lung and left lung.
AAO:0000275
One of the usually paired compound saccular thoracic organs that constitute the basic respiratory organ of air-breathing vertebrates.
FMAID:7195
MA:0000415
BTO:0000763
EHDAA:2205
http://jaxmice.jax.org/strain/009285.html
ILSXISS97/TejJ
Tomasz Adamusiak
NIC Thesaurus: C9160
childhood acute myeloid leukemia
Tomasz Adamusiak
culm
The main trunk of a plant; specifically: a primary plant axis that develops buds and shoots instead of roots.
James Malone
axis[accessedResource: BTO:0001300][accessDate: 04-11-2010]
PO:0009047
stalk[accessedResource: BTO:0001300][accessDate: 04-11-2010]
axis
The main trunk of a plant; specifically: a primary plant axis that develops buds and shoots instead of roots.[accessedResource: BTO:0001300][accessDate: 04-11-2010]
stalk
BTO:0001300
stem
culm[accessedResource: BTO:0001300][accessDate: 04-11-2010]
MAT:0000239
NCIt:C12232
FMA:55022
Uvula of palate
Uvula of palate[accessedResource: FMA:55022][accessDate: 04-11-2010]
uvula
James Malone
true
UO:0000182
http://www.ebi.ac.uk/efo/EFO_0001808
A derived unit which is a standard measure of the influence exerted by some mass.
A density unit is a derived unit which is a standard measure of the influence exerted by some mass.
density unit
James Malone
JAX:8075
TBP-105Q is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/008075.html
TBP-105Q
James Malone
A gene expression hybridization on an Affymetrix U133 chip
An assay which uses array based technology to determine information about nucleic acids or proteins
array assay
Hereditary Leiomyomatosis and Renal Cell Carcinoma
James Malone
HLRCC[accessedResource: NCIt:C51302][accessDate: 04-11-2010]
HLRCC
NCIt:C51302
hereditary leiomyomatosis and renal cell cancer
Hereditary Leiomyomatosis and Renal Cell Carcinoma[accessedResource: NCIt:C51302][accessDate: 04-11-2010]
baker's yeast
http://www.ebi.ac.uk/efo/EFO_0002655
Saccharomyces cerevisiae
James Malone
H3255
NCI-H3255
James Malone
MO_696
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#vacuum_dryer
http://www.ebi.ac.uk/efo/EFO_0002026
An instrument which removes liquid by the application of negative pressure, i.e. vacuum.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#vacuum_dryer[accessedResource: MO_696][accessDate: 04-11-2010]
vacuum dryer
James Malone
Solexa sequencing of coding RNA
Helen Parkinson
An assay which uses high throughput sequencing technology to determine the sequence of nucleic acids
high throughput sequencing assay
http://jaxmice.jax.org/strain/009271.html
ILSXISS49/TejJ
Tomasz Adamusiak
small adipocyte
Tomasz Adamusiak
Jie Zheng
haemopoietic system cell line
FBbt:00005414
ectoderm anlage in statu nascendi
James Malone
J82
James Malone
Ele Holloway
Adenocystic carcinoma[accessedResource: SNOMEDCT:11671000][accessDate: 04-11-2010]
Cylindromas
MSH:D003528
Adenocystic Carcinoma
GeneRIF:11780226
adenoid cystic carcinoma
Cylindroma, NOS (except Cylindroma of skin, M-82000)[accessedResource: SNOMEDCT:11671000][accessDate: 04-11-2010]
Adenocarcinoma, cylindroid
Cylindroma
Carcinoma characterized by bands or cylinders of hyalinized or mucinous stroma separating or surrounded by nests or cords of small epithelial cells. When the cylinders occur within masses of epithelial cells, they give the tissue a perforated, sievelike, or cribriform appearance. Such tumors occur in the mammary glands, the mucous glands of the upper and lower respiratory tract, and the salivary glands. They are malignant but slow-growing, and tend to spread locally via the nerves. (Dorland, 27th ed)[accessedResource: MSH:D003528][accessDate: 04-11-2010]
A malignant tumor arising from the epithelial cells. Microscopically, the neoplastic epithelial cells form cylindrical spatial configurations (cribriform or classic type of adenoid cystic carcinoma), cordlike structures (tubular type of adenoid cystic carcinoma), or solid structures (basaloid variant of adenoid cystic carcinoma). Adenoid cystic carcinomas mostly occur in the salivary glands. Other primary sites of involvement include the lacrimal gland, the larynx, and the lungs. Adenoid cystic carcinomas spread along nerve sheaths, resulting in severe pain, and they tend to recur. Lymph node metastases are unusual; hematogenous tumor spread is characteristic.
Cylindroma (morphologic abnormality)[accessedResource: DOID:4866][accessDate: 04-11-2010]
GeneRIF:12624503
Cylindroma NOS
Cylindroma (except Cylindroma of skin, M-82000)
Adenocarcinoma, cylindroid[accessedResource: SNOMEDCT:11671000][accessDate: 04-11-2010]
Adenoid Cystic Carcinomas[accessedResource: MSH:D003528][accessDate: 04-11-2010]
Cylindromas[accessedResource: MSH:D003528][accessDate: 04-11-2010]
GeneRIF:12452045
A malignant tumor arising from the epithelial cells. Microscopically, the neoplastic epithelial cells form cylindrical spatial configurations (cribriform or classic type of adenoid cystic carcinoma), cordlike structures (tubular type of adenoid cystic carcinoma), or solid structures (basaloid variant of adenoid cystic carcinoma). Adenoid cystic carcinomas mostly occur in the salivary glands. Other primary sites of involvement include the lacrimal gland, the larynx, and the lungs. Adenoid cystic carcinomas spread along nerve sheaths, resulting in severe pain, and they tend to recur. Lymph node metastases are unusual; hematogenous tumor spread is characteristic.[accessedResource: NCIt:C2970][accessDate: 04-11-2010]
Cylindroma, NOS (except Cylindroma of skin, M-82000)
Adenoid Cystic Carcinomas
Bronchial adenoma, cylindroid[accessedResource: SNOMEDCT:11671000][accessDate: 04-11-2010]
Adenoid cystic carcinoma (morphologic abnormality)
adenoid cystic cancer
Cylindroma[accessedResource: MSH:D003528][accessDate: 04-11-2010]
GeneRIF:15943036
GeneRIF:15529180
Carcinoma characterized by bands or cylinders of hyalinized or mucinous stroma separating or surrounded by nests or cords of small epithelial cells. When the cylinders occur within masses of epithelial cells, they give the tissue a perforated, sievelike, or cribriform appearance. Such tumors occur in the mammary glands, the mucous glands of the upper and lower respiratory tract, and the salivary glands. They are malignant but slow-growing, and tend to spread locally via the nerves. (Dorland, 27th ed)
Bronchial adenoma, cylindroid
adenoid cystic cancer[accessedResource: DOID:4866][accessDate: 04-11-2010]
Cylindroma NOS[accessedResource: DOID:4866][accessDate: 04-11-2010]
SNOMEDCT:11671000
GeneRIF:15370139
GeneRIF:15292943
James Malone
adenoid cystic carcinoma (morphologic abnormality)[accessedResource: DOID:4866][accessDate: 04-11-2010]
Cylindroma (morphologic abnormality)
Cylindroma (except Cylindroma of skin, M-82000)[accessedResource: SNOMEDCT:11671000][accessDate: 04-11-2010]
NCIt:C2970
DOID:4866
chief cell of parathyroid gland[accessedResource: CL:0000446][accessDate: 04-11-2010]
chief cell[accessedResource: TAO:0009207][accessDate: 04-11-2010]
FMAID:13890
CL:0000446
chief cell of parathyroid gland
Parathyroid gland
XAO:0000167
Any of usually four small endocrine glands that are adjacent to or embedded in the thyroid gland and produce parathyroid hormone.
parathyroid hormone secreting cell
chief cell
Principal cell of parathyroid gland
Parathyroid chief cell
parathyroid
Principal cell of parathyroid gland[accessedResource: CL:0000446][accessDate: 04-11-2010]
MA:0000128
An epithelial cell of the parathyroid gland that is arranged in wide, irregular interconnecting columns; responsible for the synthesis and secretion of parathyroid hormone.
EV:0100134
Any of usually four small endocrine glands that are adjacent to or embedded in the thyroid gland and produce parathyroid hormone.[accessedResource: BTO:0000997][accessDate: 04-11-2010]
An epithelial cell of the parathyroid gland that is arranged in wide, irregular interconnecting columns; responsible for the synthesis and secretion of parathyroid hormone.[accessedResource: CL:0000446][accessDate: 04-11-2010]
James Malone
Parathyroid gland chief cell
parathyroid hormone secreting cell[accessedResource: CL:0000446][accessDate: 04-11-2010]
TAO:0009207
Tomasz Adamusiak
Parathyroid gland chief cell[accessedResource: CL:0000446][accessDate: 04-11-2010]
EHDAA:3864
BTO:0000997
parathyroid gland[accessedResource: BTO:0000997][accessDate: 04-11-2010]
Parathyroid chief cell[accessedResource: CL:0000446][accessDate: 04-11-2010]
EHDAA:3870
http://www.arabidopsis.org/servlets/TairObject?id=1005164920&type=germplasm
CS57924 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005164920&type=germplasm
CS57924
James Malone
NCIt:C32836
FMA:3947
internal carotid artery
James Malone
James Malone
HCC1007
Natural Language Generator 8th April 2010
A HCC1007 is a cell line.
A HCC1007 is all of the following: something that is bearer of a breast carcinoma, something that derives from an epithelial cell, and something that derives from a mammary gland.
The quality of an organism that has successful reproduced.
parous
James Malone
Fetal Blood
Fetal Blood[accessedResource: NCIt:C22560][accessDate: 04-11-2010]
Blood (fetal) (MMHCC)[accessedResource: NCIt:C22560][accessDate: 04-11-2010]
Jie Zheng
fetal blood cell
Tomasz Adamusiak
Blood (fetal) (MMHCC)
NCIt:C22560
antioxidants
http://www.ebi.ac.uk/efo/EFO_0001817
CHEBI:22586
antoxidant
antioxydant
A substance that opposes oxidation or inhibits reactions brought about by dioxygen or peroxides.
James Malone
antioxidant
ICD9:366.46
CATARACT W RADIATION
Cataract (disorder)[accessedResource: SNOMEDCT:193570009][accessDate: 04-11-2010]
GeneRIF:11864421
Cataract form (observable entity)[accessedResource: SNOMEDCT:247053007][accessDate: 04-11-2010]
Other cataract[accessedResource: SNOMEDCT:193620000][accessDate: 04-11-2010]
GeneRIF:12485166
Cataract associated with other syndromes
GeneRIF:15277496
GeneRIF:15570218
ICD9:366.44
Other cataract (disorder)[accessedResource: SNOMEDCT:193620000][accessDate: 04-11-2010]
GeneRIF:12944971
GeneRIF:12089525
GeneRIF:15016766
NCIt:C26713
SNOMEDCT:193622008
CATARACT W SYNDROME NEC
ICD9:366
SNOMEDCT:193623003
SNOMEDCT:193570009
GeneRIF:15041957
GeneRIF:11955914
CATARACT NEC[accessedResource: ICD9:366.8][accessDate: 04-11-2010]
SNOMEDCT:128306009
GeneRIF:12620964
GeneRIF:15623749
GeneRIF:16179416
Cataract associated with radiation and other physical influences
CATARACT W SYNDROME NEC[accessedResource: ICD9:366.44][accessDate: 04-11-2010]
Lenticular opacity[accessedResource: SNOMEDCT:193570009][accessDate: 04-11-2010]
Cataract (M-54510)
SNOMEDCT:193608008
James Malone
GeneRIF:12079281
Cataract NOS[accessedResource: SNOMEDCT:193623003][accessDate: 04-11-2010]
Cataract (morphologic abnormality)
Cat. - Cataract
Cataract (disorder)
GeneRIF:12475213
Cataract associated with other syndromes[accessedResource: SNOMEDCT:193608008][accessDate: 04-11-2010]
Cataract form (observable entity)
Cataract NOS
DOID:83
Lens opacity[accessedResource: SNOMEDCT:193570009][accessDate: 04-11-2010]
Cat. - Cataract[accessedResource: SNOMEDCT:193570009][accessDate: 04-11-2010]
Lens opacity
GeneRIF:15286169
CATARACT NEC
cataract
GeneRIF:15249368
GeneRIF:12360425
GeneRIF:12426373
Partial or complete opacity of the crystalline lens of one or both eyes that decreases visual acuity and eventually results in blindness. Some cataracts appear in infancy or in childhood, but most develop in older individuals. (Sternberg Diagnostic Surgical Pathology, 3rd ed.)[accessedResource: NCIt:C26713][accessDate: 04-11-2010]
Cataract (morphologic abnormality)[accessedResource: SNOMEDCT:128306009][accessDate: 04-11-2010]
GeneRIF:9813099
Cataract form
SNOMEDCT:193620000
GeneRIF:15452067
Lenticular opacity
Cataract NOS (disorder)
Cataract (M-54510)[accessedResource: SNOMEDCT:128306009][accessDate: 04-11-2010]
GeneRIF:15004872
GeneRIF:15347804
SNOMEDCT:247053007
Cataract associated with other disorders[accessedResource: ICD9:366.4][accessDate: 04-11-2010]
Partial or complete opacity of the crystalline lens of one or both eyes that decreases visual acuity and eventually results in blindness. Some cataracts appear in infancy or in childhood, but most develop in older individuals. (Sternberg Diagnostic Surgical Pathology, 3rd ed.)
Other cataract NOS
CATARACT W RADIATION[accessedResource: ICD9:366.46][accessDate: 04-11-2010]
Cataract associated with radiation and other physical influences[accessedResource: ICD9:366.46][accessDate: 04-11-2010]
Unspecified cataract[accessedResource: ICD9:366.9][accessDate: 04-11-2010]
GeneRIF:15322286
ICD9:366.8
ICD9:366.9
Other cataract
Cataract NOS (disorder)[accessedResource: SNOMEDCT:193623003][accessDate: 04-11-2010]
GeneRIF:15101113
GeneRIF:15064679
Cataract associated with other disorders
GeneRIF:16310481
Cataract associated with other syndromes (disorder)
GeneRIF:15342707
Cataract form[accessedResource: SNOMEDCT:247053007][accessDate: 04-11-2010]
GeneRIF:12942049
ICD9:366.4
Other cataract NOS (disorder)[accessedResource: SNOMEDCT:193622008][accessDate: 04-11-2010]
GeneRIF:11904300
GeneRIF:12724621
GeneRIF:15208569
GeneRIF:15709761
Other cataract NOS (disorder)
Other cataract (disorder)
GeneRIF:12356818
Unspecified cataract
Cataract associated with other syndromes (disorder)[accessedResource: SNOMEDCT:193608008][accessDate: 04-11-2010]
Other cataract NOS[accessedResource: SNOMEDCT:193622008][accessDate: 04-11-2010]
JAX:008216
TBP-71Q-16 is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/008216.html
TBP-71Q-16
James Malone
redundant now and is synonymous to material type.
true
population of an organism, organism, organism part, cell
Controlled terms for the state of the BioMaterial. Each state (BioSource, different BioSamples, and LabeledExtract) have MaterialTypes. Examples are population of an organism, organism, organism part, cell
obsolete_material type
FBbt:00005524
antEndoP2
antEndoP2[accessedResource: FBbt:00005524][accessDate: 04-11-2010]
anterior endoderm primordium
James Malone
A GM19239 is a cell line.
A GM19239 is all of the following: something that has as quality a male, something that derives from a Homo sapiens, and something that derives from a b cell.
Natural Language Generator 8th April 2010
James Malone
GM19239
InChIKey=HKSZLNNOFSGOKW-PULLEYNNDJ
An indolocarbazole alkaloid that has formula C28H26N4O3.
CHEBI:15738
James Malone
CN[C@@H]1C[C@H]2O[C@@](C)([C@@H]1OC)n1c3ccccc3c3c4CNC(=O)c4c4c5ccccc5n2c4c13
staurosporine
InChI=1/C28H26N4O3/c1-28-26(34-3)17(29-2)12-20(35-28)31-18-10-6-4-8-14(18)22-23-16(13-30-27(23)33)21-15-9-5-7-11-19(15)32(28)25(21)24(22)31/h4-11,17,20,26,29H,12-13H2,1-3H3,(H,30,33)/t17-,20-,26-,28+/m1/s1/f/h30H
An organic heterooctacyclic compound that has formula C28H26N4O3.
Staurosporin
C28H26N4O3
http://www.ebi.ac.uk/efo/EFO_0001613
(5S,6R,7R,9R)-6-methoxy-5-methyl-7-methylamino-6,7,8,9,15,16-hexahydro-5H,14H-5,9-epoxy-4b,9a,15-triazadibenzo[b,h]cyclonona[1,2,3,4-jkl]cyclopenta[e]-as-indacen-14-one
Totipotent cell cultured from early embryo. Have the advantage that following modification in vitrothey can be used to produce chimeric embryos and thus transgenic animals.
ES cell[accessedResource: BTO:0001086][accessDate: 04-11-2010]
CL:0000352
James Malone
epiblast cell
A cell of the outer layer of a blastula that gives rise to the ectoderm after gastrulation.[accessedResource: CL:0000352][accessDate: 04-11-2010]
BTO:0001086
A cell of the outer layer of a blastula that gives rise to the ectoderm after gastrulation.
Totipotent cell cultured from early embryo. Have the advantage that following modification in vitrothey can be used to produce chimeric embryos and thus transgenic animals.[accessedResource: BTO:0001086][accessDate: 04-11-2010]
ES cell
embryonic stem cell
epiblast cell[accessedResource: CL:0000352][accessDate: 04-11-2010]
Monophasic sarcoma of Synovium[accessedResource: DOID:5495][accessDate: 04-11-2010]
monophasic sarcoma of the synovium[accessedResource: DOID:5495][accessDate: 04-11-2010]
NCIt:C6534
DOID:5495
Monophasic sarcoma of Synovium
James Malone
A synovial sarcoma characterized by the presence of an epithelial or a spindle cell component only.[accessedResource: NCIt:C6534][accessDate: 04-11-2010]
monophasic sarcoma of the synovium
A synovial sarcoma characterized by the presence of an epithelial or a spindle cell component only.
monophasic synovial sarcoma
MO_729
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#normalization_testing_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#normalization_testing_design[accessedResource: MO_729][accessDate: 04-11-2010]
normalization testing design
Tomasz Adamusiak
HT
James Malone
Ele Holloway
ZFS:0000028
segmentation 26+ somites
James Malone
breast cancer cell line
MHHPREB1
James Malone
Ele Holloway
true
BFO:function
A realizable entity [snap:RealizableEntity] the manifestation of which is an essentially end-directed activity of a continuant [snap:Continuant] entity in virtue of that continuant [snap:Continuant] entity being a specific kind of entity in the kind or kinds of contexts that it is made for.
http://www.ebi.ac.uk/efo/EFO_0001441
A function is an entity which is an essentially end-directed activity of a material entity in virtue of that entity being a specific kind of entity in the kind or kinds of contexts that it is made for. For example,
function
James Malone
InChIKey=RZJQGNCSTQAWON-UHFFFAOYAR
InChI=1/C17H14O4S/c1-22(19,20)14-9-7-12(8-10-14)15-11-21-17(18)16(15)13-5-3-2-4-6-13/h2-10H,11H2,1H3
Ceoxx
4-[4-(methylsulfonyl)phenyl]-3-phenyl-2(5H)-furanone
rofecoxib
http://www.ebi.ac.uk/efo/EFO_0001604
Vioxx
A butenolide that has formula C17H14O4S.
CHEBI:8887
4-[4-(methylsulfonyl)phenyl]-3-phenylfuran-2(5H)-one
CS(=O)(=O)c1ccc(cc1)C1=C(C(=O)OC1)c1ccccc1
A sulfone that has formula C17H14O4S.
C17H14O4S
http://www.arabidopsis.org/servlets/TairObject?id=1005158652&type=germplasm
CS57628 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158652&type=germplasm
CS57628
James Malone
Gall-like structures on the roots of legumes that contain symbiotic nitrogen-fixing bacteria.
Gall-like structures on the roots of legumes that contain symbiotic nitrogen-fixing bacteria.[accessedResource: BTO:0001190][accessDate: 04-11-2010]
root nodule
nodule
BTO:0001190
James Malone
nodule[accessedResource: BTO:0001190][accessDate: 04-11-2010]
PO:0003023
MAT:0000353
GM12875
James Malone
BTO:0001435
A human upper limb; especially: the part between the shoulder and the wrist.
NCIt:C32141
The portion of the upper extremity between the shoulder and the elbow. For clinical purposes this term is also used to refer to the whole superior limb.
James Malone
A human upper limb; especially: the part between the shoulder and the wrist.[accessedResource: BTO:0001435][accessDate: 04-11-2010]
arm
The portion of the upper extremity between the shoulder and the elbow. For clinical purposes this term is also used to refer to the whole superior limb.[accessedResource: NCIt:C32141][accessDate: 04-11-2010]
A type of malignant cancer that arises from epithelial cells tending to infiltrate the surrounding tissues and give rise to metastases.
carcinoma
James Malone
HCC38
James Malone
NCIt:C2985
Diabetes
James Malone
Diabetes[accessedResource: NCIt:C2985][accessDate: 04-11-2010]
GeneRIF:12027924
GeneRIF:15699510
GeneRIF:15563983
GeneRIF:15699511
A heterogeneous group of disorders characterized by HYPERGLYCEMIA and GLUCOSE INTOLERANCE.
GeneRIF:12673582
GeneRIF:15639198
diabetes mellitus
GeneRIF:12783844
GeneRIF:15609025
GeneRIF:16098926
A metabolic disorder characterized by abnormally high blood sugar levels due to diminished production of insulin or insulin resistance/desensitization.
GeneRIF:11896938
SNOMEDCT:73211009
GeneRIF:15126243
GeneRIF:15699513
Diabetes mellitus, NOS
GeneRIF:12955714
MSH:D003920
GeneRIF:15251864
GeneRIF:15554360
GeneRIF:15790730
GeneRIF:12738401
GeneRIF:15281346
GeneRIF:15557196
GeneRIF:11822825
GeneRIF:12062816
GeneRIF:14714273
GeneRIF:14675060
GeneRIF:14716305
GeneRIF:12062854
GeneRIF:15800961
GeneRIF:12679462
GeneRIF:12118252
GeneRIF:11774208
GeneRIF:15699509
GeneRIF:11912494
GeneRIF:15940393
GeneRIF:11947965
GeneRIF:12765847
GeneRIF:15476949
GeneRIF:14658759
GeneRIF:12536206
GeneRIF:12095538
GeneRIF:12753312
GeneRIF:12529387
A metabolic disorder characterized by abnormally high blood sugar levels due to diminished production of insulin or insulin resistance/desensitization.[accessedResource: NCIt:C2985][accessDate: 04-11-2010]
GeneRIF:12738397
GeneRIF:12230824
GeneRIF:14998943
GeneRIF:11980626
GeneRIF:15662218
GeneRIF:12490143
GeneRIF:15355441
GeneRIF:12649573
GeneRIF:12012276
GeneRIF:16260427
GeneRIF:15699497
GeneRIF:11938023
DM - Diabetes mellitus[accessedResource: SNOMEDCT:73211009][accessDate: 04-11-2010]
GeneRIF:15516784
GeneRIF:15646011
Diabetes mellitus, NOS[accessedResource: SNOMEDCT:73211009][accessDate: 04-11-2010]
GeneRIF:16002993
GeneRIF:15221640
GeneRIF:12148086
GeneRIF:12207164
GeneRIF:15286433
GeneRIF:14654370
GeneRIF:12679473
GeneRIF:15258348
GeneRIF:15173029
GeneRIF:12748907
GeneRIF:12719374
Diabetes mellitus (disorder)
GeneRIF:11882518
GeneRIF:15237707
GeneRIF:15156314
GeneRIF:15156315
GeneRIF:14674716
GeneRIF:15831366
GeneRIF:12639765
GeneRIF:11668623
GeneRIF:15128745
GeneRIF:15112906
DOID:9351
GeneRIF:12021129
GeneRIF:12787913
GeneRIF:12920574
GeneRIF:12706323
DM - Diabetes mellitus
GeneRIF:15699512
GeneRIF:14726620
GeneRIF:15538935
GeneRIF:12898475
GeneRIF:12021133
GeneRIF:14631138
Diabetes NOS
GeneRIF:12221327
GeneRIF:15046742
GeneRIF:12200076
GeneRIF:11916624
GeneRIF:14641003
GeneRIF:11916625
GeneRIF:12584444
GeneRIF:15959417
GeneRIF:12618277
A heterogeneous group of disorders characterized by HYPERGLYCEMIA and GLUCOSE INTOLERANCE.[accessedResource: MSH:D003920][accessDate: 04-11-2010]
GeneRIF:15166380
GeneRIF:15625086
GeneRIF:12574207
GeneRIF:16087164
Diabetes mellitus (disorder)[accessedResource: DOID:9351][accessDate: 04-11-2010]
GeneRIF:15123681
GeneRIF:12039697
GeneRIF:15367890
GeneRIF:14766207
Diabetes NOS[accessedResource: DOID:9351][accessDate: 04-11-2010]
GeneRIF:15797963
GeneRIF:14764811
GeneRIF:11796176
GeneRIF:12500218
GeneRIF:11888844
GeneRIF:15887858
ICD9:250
GeneRIF:12589429
GeneRIF:11875060
GeneRIF:15070960
C3A
James Malone
Ele Holloway
GeneRIF:15331795
Intracranial haemorrhage[accessedResource: SNOMEDCT:1386000][accessDate: 04-11-2010]
ICD9:432.9
intracranial hemorrhage NOS (disorder)
Hemorrhages, Brain[accessedResource: MSH:D020300][accessDate: 04-11-2010]
Unspecified intracranial hemorrhage
SNOMEDCT:1386000
MSH:D020300
Intracranial haemorrhage
Brain Hemorrhage[accessedResource: MSH:D020300][accessDate: 04-11-2010]
INTRACRANIAL HEMORR NOS[accessedResource: ICD9:432.9][accessDate: 04-11-2010]
intracranial hemorrhage NOS
DOID:1126
Hemorrhages, Brain
Hemorrhage, Posterior Fossa[accessedResource: MSH:D020300][accessDate: 04-11-2010]
Hemorrhage, Brain
SNOMEDCT:195178005
Intracranial haemorrhage NOS
Hemorrhages, Posterior Fossa
intracranial hemorrhage (disorder)
Intracranial hemorrhage (disorder)[accessedResource: SNOMEDCT:1386000][accessDate: 04-11-2010]
Intracranial hemorrhage[accessedResource: SNOMEDCT:1386000][accessDate: 04-11-2010]
Hemorrhages, Posterior Fossa[accessedResource: MSH:D020300][accessDate: 04-11-2010]
INTRACRANIAL HEMORR NOS
Hemorrhages, Intracranial
Intracranial hemorrhage NOS (disorder)[accessedResource: SNOMEDCT:195178005][accessDate: 04-11-2010]
Intracranial haemorrhage NOS[accessedResource: SNOMEDCT:195178005][accessDate: 04-11-2010]
Bleeding within the SKULL, including hemorrhages in the brain and the three membranes of MENINGES. The escape of blood often leads to the formation of HEMATOMA in the cranial epidural, subdural, and subarachnoid spaces.
Posterior Fossa Hemorrhage
Unspecified intracranial hemorrhage[accessedResource: DOID:1126][accessDate: 04-11-2010]
James Malone
intracranial Hemorrhages[accessedResource: DOID:1126][accessDate: 04-11-2010]
HEMORRHAGE INTRACRANIAL
Bleeding within the SKULL, including hemorrhages in the brain and the three membranes of MENINGES. The escape of blood often leads to the formation of HEMATOMA in the cranial epidural, subdural, and subarachnoid spaces.[accessedResource: MSH:D020300][accessDate: 04-11-2010]
MO_591
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#biomaterial_provider
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#biomaterial_provider[accessedResource: MO_591][accessDate: 04-11-2010]
biomaterial provider
Tomasz Adamusiak
HPL1
James Malone
Ele Holloway
ChaGoK1
James Malone
Ele Holloway
2.4
Jie Zheng
Tomasz Adamusiak
obsolete_cultivar
James Malone
MO_124
true
A cultivated plant variety selected and given a name because it has desirable characteristics that distinguish it from otherwise similar plants of the same species.
using strain to hang cultivar subclasses in future
Glioblastomas[accessedResource: MSH:D005909][accessDate: 10-05-2010]
Glioblastomas, Giant Cell
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures.[accessedResource: MSH:D005909][accessDate: 10-05-2010]
Grade IV Astrocytomas
Glioblastoma
DOID:3074
Glioblastoma Multiforme
A rare histological variant of glioblastoma (WHO grade IV) with a predominance of bizarre, multinucleated giant cells, an occasionally abundant stromal reticulin network, and a high frequency of TP53 mutations. (WHO)
Monstrocellular sarcoma [obs]
obsolete_brain tumor glioblastoma
true
Giant cell glioblastoma (morphologic abnormality)[accessedResource: SNOMEDCT:44529004][accessDate: 10-05-2010]
Glioblastomas, Giant Cell[accessedResource: MSH:D005909][accessDate: 10-05-2010]
Giant cell glioblastoma (morphologic abnormality)
Astrocytomas, Grade IV[accessedResource: MSH:D005909][accessDate: 10-05-2010]
NCIt:C4325
Monstrocellular sarcoma [obs][accessedResource: DOID:3074][accessDate: 10-05-2010]
Glioblastoma Multiforme[accessedResource: MSH:D005909][accessDate: 10-05-2010]
Astrocytoma, Grade IV
Glioblastoma, Giant Cell[accessedResource: MSH:D005909][accessDate: 10-05-2010]
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures.
MSH:D005909
A rare histological variant of glioblastoma (WHO grade IV) with a predominance of bizarre, multinucleated giant cells, an occasionally abundant stromal reticulin network, and a high frequency of TP53 mutations. (WHO)[accessedResource: NCIt:C4325][accessDate: 10-05-2010]
Glioblastomas
Giant cell glioblastoma
Glioblastoma[accessedResource: MSH:D005909][accessDate: 10-05-2010]
SNOMEDCT:44529004
Grade IV Astrocytoma[accessedResource: MSH:D005909][accessDate: 10-05-2010]
BTO:0000034
GRO:0000231
A group of cells at the tip of the stem and root that give rise by cell division to the primary tissues and are ultimately responsible for the structural organization of the entire primary plant body.
GRO:0000231[accessedResource: BTO:0000034][accessDate: 04-11-2010]
A group of cells at the tip of the stem and root that give rise by cell division to the primary tissues and are ultimately responsible for the structural organization of the entire primary plant body.[accessedResource: BTO:0000034][accessDate: 04-11-2010]
apical meristem
James Malone
H1648
NCI-H1648
James Malone
ZFS:0000003
cleavage 4-cell
James Malone
The total number of individuals inhabiting a particular region or area.
mixed sex[accessedResource: PATO:0001338][accessDate: 04-11-2010]
mixed sex
PATO:0001338
A biological sex quality inhering in a population of multiple sexes.[accessedResource: PATO:0001338][accessDate: 04-11-2010]
James Malone
mixed sex population
A biological sex quality inhering in a population of multiple sexes.
retinal ganglion
use synonym chemical compound
true
obsolete_compound factor
James Malone
EMAPA:18028
FMAID:16581
pelvic girdle
EHDAA:7149
MA:0000293
MAT:0000182
Subdivision of free lower limb, which is the proximal segment of a lower limb and links the free lower limb to the trunk; it is demarcated by the plane of the surface of the acetabular fossa from the free lower limb; together with the free lower limb, it constitutes the lower limb. Examples: There are only two instances, right and left pelvic girdles.
CORL279
James Malone
Ele Holloway
JCRB1081
MS-1-L
MS-1
James Malone
Ele Holloway
Human Caucasian lung small cell carcinoma cell line.[accessedResource: BTO:0000679][accessDate: 04-11-2010]
James Malone
Human Caucasian lung small cell carcinoma cell line.
Ele Holloway
H69 cell[accessedResource: BTO:0000679][accessDate: 04-11-2010]
H69 cell
HTB-119
BTO:0000679
H69
NCIt:C14274
SIV
An HIV-like virus that infects monkeys, chimpanzees, and other non-human primates. (AIDS Info HIV Glossary)
SIV[accessedResource: NCIt:C14274][accessDate: 04-11-2010]
An HIV-like virus that infects monkeys, chimpanzees, and other non-human primates. (AIDS Info HIV Glossary)[accessedResource: NCIt:C14274][accessDate: 04-11-2010]
simian immunodeficiency virus
James Malone
CL:0002334
preadipocyte
An undifferentiated fibroblast that can be stimulated to form a fat cell.[accessedResource: CL:0002334][accessDate: 04-11-2010]
Tomasz Adamusiak
An undifferentiated fibroblast that can be stimulated to form a fat cell.
A precursor to an adipocyte.[accessedResource: BTO:0001107][accessDate: 04-11-2010]
BTO:0001107
James Malone
A precursor to an adipocyte.
A measurement of the survival rate for a group of individuals suffering from a disease.
overall survival
James Malone
MAT:0000199
MA:0000058
white fat
James Malone
fibrosarcoma
HP:0002414
spina bifida
Tomasz Adamusiak
NCI-H441
James Malone
Ele Holloway
DPA
acide valproique
acido valproico
Valproinsaeure
CHEBI:39867
CCCC(CCC)C(O)=O
Depakene
valproic acid
2-PROPYL-PENTANOIC ACID
A monocarboxylic acid that has formula C8H16O2.
Di-n-propylessigsaeure
di-n-propylacetic acid
2-propylvaleric acid
2-propylpentanoic acid
C8H16O2
James Malone
InChIKey=NIJJYAXOARWZEE-BGGKNDAXCP
InChI=1/C8H16O2/c1-3-5-7(6-4-2)8(9)10/h7H,3-6H2,1-2H3,(H,9,10)/f/h9H
http://www.ebi.ac.uk/efo/EFO_0001634
dipropylacetic acid
2-n-propyl-n-valeric acid
4-heptanecarboxylic acid
n-DPA
acidum valproicum
HOS
James Malone
Ele Holloway
FMAID:9663
Intermediate segment of free upper limb
Antebrachial region
Intermediate segment of free upper limb[accessedResource: FMAID:9663][accessDate: 04-11-2010]
Antebrachial region[accessedResource: FMAID:9663][accessDate: 04-11-2010]
forearm
Tomasz Adamusiak
SUM1315MO2
James Malone
(2R,3R,4R,5R)-hexane-1,2,3,4,5,6-hexol
InChIKey=FBPFZTCFMRRESA-KVTDHHQDBH
CHEBI:16899
OC[C@@H](O)[C@@H](O)[C@H](O)[C@H](O)CO
James Malone
(2R,3R,4R,5R)-Hexane-1,2,3,4,5,6-hexaol
Osmitrol
C6H14O6
InChI=1/C6H14O6/c7-1-3(9)5(11)6(12)4(10)2-8/h3-12H,1-2H2/t3-,4-,5-,6-/m1/s1
mannitol
http://www.ebi.ac.uk/efo/EFO_0001525
A mannitol that has formula C6H14O6.
The D-enantiomer of mannitol.
D-mannitol
James Malone
HCC2185
antilipemic
antihyperlipidemic
CHEBI:35679
A substance used to treat hyperlipidemia (an excess of lipids in the blood).
James Malone
http://www.ebi.ac.uk/efo/EFO_0001851
hypolipidemic agent
antilipemic drugs
antihyperlipemic
antilipemic drug
BHT101
James Malone
Ele Holloway
true
Tomasz Adamusiak
malignant tumor
malignant neoplasia
James Malone
malignant tumour
cancer
ductal carcinoma in situ
NIFSTD:birnlex_406
A malignant neoplasm in which new abnormal tissue grow by excessive cellular division and proliferation more rapidly than normal and continues to grow after the stimuli that initiated the new growth cease.
tegument
XAO:0000176
MA:0000014
dermal system[accessedResource: MAT:0000033][accessDate: 04-11-2010]
AAO:0000239
organ system
Something that covers or encloses; especially: an enveloping layer (as a skin, membrane, or husk) of an organism or one of its parts.
WBbt:0005730
FBbt:00004856
EHDAA:6520
TADS:0000108
Integumentary system
organ system[accessedResource: FBbt:00004856][accessDate: 04-11-2010]
MAT:0000033
epithelial system - sensu C elegans
A division of the whole organism into specialized systems.[accessedResource: FBbt:00004856][accessDate: 04-11-2010]
BTO:0000634
dermal system
Something that covers or encloses; especially: an enveloping layer (as a skin, membrane, or husk) of an organism or one of its parts.[accessedResource: BTO:0000634][accessDate: 04-11-2010]
FMAID:72979
integument
A division of the whole organism into specialized systems.
EMAPA:17524
The taxon-independent term for the outer covering of an organism[accessedResource: MAT:0000033][accessDate: 04-11-2010]
tegument[accessedResource: BTO:0000634][accessDate: 04-11-2010]
integument[accessedResource: BTO:0000634][accessDate: 04-11-2010]
EV:0100151
Integumentary system[accessedResource: FMAID:72979][accessDate: 04-11-2010]
The taxon-independent term for the outer covering of an organism
integumental system
James Malone
epithelial system - sensu C elegans[accessedResource: MAT:0000033][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
The part of organism's anatomy or substance arising from an organism from which the biomaterial was derived, excludes cells. E.g. tissue, organ, system, sperm, blood or body location (arm).
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#organism_part
true
tissue, organ, system, sperm, blood or body location (arm).
MO_954
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#organism_part[accessedResource: MO_954][accessDate: 04-11-2010]
organism part
James Malone
SUM225CWN
GM12248
James Malone
ML2
James Malone
Ele Holloway
NIFSTD:birnlex_160
rat
Mammals, Rats
http://www.ebi.ac.uk/efo/EFO_0001995
Rat[accessedResource: NIFSTD:birnlex_160][accessDate: 04-11-2010]
Rattus
Tomasz Adamusiak
FORMALIN
CH2O
formaldehyde
The simplest aldehyde.
Formaldehyd
Oxomethylene
Methanal
http://www.ebi.ac.uk/efo/EFO_0001538
CHEBI:16842
InChIKey=WSFSSNUMVMOOMR-UHFFFAOYAT
InChI=1/CH2O/c1-2/h1H2
An aldehyde that has formula CH2O.
Methylene oxide
[H]C([H])=O
Oxomethane
Endometriosis (clinical)[accessedResource: SNOMEDCT:129103003][accessDate: 04-11-2010]
GeneRIF:12042273
Endometriosis, site unspecified[accessedResource: ICD9:617.9][accessDate: 04-11-2010]
GeneRIF:12832381
GeneRIF:14556808
GeneRIF:11870103
GeneRIF:11883743
SNOMEDCT:396224008
GeneRIF:15242994
GeneRIF:15640252
GeneRIF:15861041
Endometriosis NOS (disorder)[accessedResource: SNOMEDCT:198259004][accessDate: 04-11-2010]
Endometriosis, site unspecified
GeneRIF:15746194
GeneRIF:12012624
GeneRIF:12009356
GeneRIF:15212674
GeneRIF:15705625
GeneRIF:12517591
GeneRIF:14980314
GeneRIF:14644829
GeneRIF:12062821
GeneRIF:15120697
GeneRIF:16084889
GeneRIF:12594002
GeneRIF:15212671
GeneRIF:15950672
GeneRIF:14989983
SNOMEDCT:198259004
Endometriosis NOS (disorder)
Endometriosis (disorder)
GeneRIF:12837926
Endometriosis of other specified sites
GeneRIF:15764806
GeneRIF:12571184
GeneRIF:15083380
SNOMEDCT:129103003
GeneRIF:14506926
ENDOMETRIOSIS NEC[accessedResource: ICD9:617.8][accessDate: 04-11-2010]
GeneRIF:15193490
GeneRIF:14764801
GeneRIF:14645176
Endometriosis NOS
GeneRIF:12200463
GeneRIF:12372468
GeneRIF:16098858
GeneRIF:16144297
GeneRIF:15613411
GeneRIF:12372460
GeneRIF:15820792
GeneRIF:15665016
GeneRIF:15166131
GeneRIF:12587534
GeneRIF:15749523
GeneRIF:15319381
GeneRIF:15879464
ICD9:617.8
GeneRIF:11716965
GeneRIF:11925378
GeneRIF:16024248
GeneRIF:12699881
GeneRIF:15589849
GeneRIF:15618253
GeneRIF:15588473
DOID:289
GeneRIF:15059587
GeneRIF:15602080
GeneRIF:15866595
GeneRIF:15533352
NCIt:C3014
GeneRIF:12620489
Endometriosis of other specified sites[accessedResource: ICD9:617.8][accessDate: 04-11-2010]
GeneRIF:12571183
ENDOMETRIOSIS NOS[accessedResource: ICD9:617.9][accessDate: 04-11-2010]
Endometriosis (morphologic abnormality)
GeneRIF:12525458
GeneRIF:15531592
GeneRIF:14505259
GeneRIF:11756572
James Malone
GeneRIF:15236995
GeneRIF:12034345
GeneRIF:12788899
GeneRIF:16192641
GeneRIF:12700072
endometriosis
The growth of functional endometrial tissue in anatomic sites outside the uterine body. It most often occurs in the pelvic organs.[accessedResource: NCIt:C3014][accessDate: 04-11-2010]
GeneRIF:12568865
GeneRIF:11994543
Endometriosis (disorder)[accessedResource: SNOMEDCT:129103003][accessDate: 04-11-2010]
GeneRIF:11968047
ICD9:617
GeneRIF:12372466
The growth of functional endometrial tissue in anatomic sites outside the uterine body. It most often occurs in the pelvic organs.
GeneRIF:12372458
Endometriosis (morphologic abnormality)[accessedResource: SNOMEDCT:396224008][accessDate: 04-11-2010]
ENDOMETRIOSIS NEC
GeneRIF:12529420
GeneRIF:15820794
GeneRIF:15749482
GeneRIF:16084898
GeneRIF:15166129
GeneRIF:12297480
GeneRIF:14967364
GeneRIF:14667896
GeneRIF:15878920
GeneRIF:11963839
GeneRIF:14998974
GeneRIF:15755869
GeneRIF:14667898
GeneRIF:15120698
GeneRIF:15044605
ICD9:617.9
GeneRIF:16210018
GeneRIF:11804955
GeneRIF:15105396
Endometriosis (clinical)
GeneRIF:15979997
GeneRIF:15979990
GeneRIF:16006475
GeneRIF:15302278
GeneRIF:12773447
GeneRIF:16169423
GeneRIF:15126568
GeneRIF:15734764
GeneRIF:15472211
GeneRIF:12112590
ethyl 2-(4-chlorophenoxy)-2-methylpropanoate
A propanoate ester that has formula C12H15ClO3.
Ethyl 2-(p-chlorophenoxy)isobutyrate
InChIKey=KNHUKKLJHYUCFP-UHFFFAOYAE
Lipofacton
2-(p-Chlorophenoxy)-2-methylpropionic acid ethyl ester
Ethyl chlorophenoxyisobutyrate
clofibrato
CHEBI:3750
InChI=1/C12H15ClO3/c1-4-15-11(14)12(2,3)16-10-7-5-9(13)6-8-10/h5-8H,4H2,1-3H3
C12H15ClO3
EPIB
alpha-p-Chlorophenoxyisobutyryl ethyl ester
clofibrate
Liprin
ELPI
alpha-(p-Chlorophenoxy)isobutyric acid, ethyl ester
http://www.ebi.ac.uk/efo/EFO_0001508
Ethyl clofibrate
clofibratum
CCOC(=O)C(C)(C)Oc1ccc(Cl)cc1
Atromid-S
2-(4-Chlorophenoxy)-2-methylpropanoic acid ethyl ester
AML without Maturation
M1 Acute Myelocytic Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
NCIt:C3249
An acute myeloid leukemia (AML) characterized by blasts without evidence of maturation to more mature neutrophils. The patients present with anemia, neutropenia, and thrombocytopenia. This type of AML usually follows an aggressive clinical course. (WHO, 2001)[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
Acute Myelogenous Leukemia without Maturation
acute myeloblastic leukemia without maturation
M1 Acute Myeloblastic Leukemia[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
Acute Myeloid Leukemia without Maturation (FAB M1)[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Myelocytic Leukemia
M1 Acute Myelogenous Leukemia[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
Acute Myeloid Leukemia without Maturation
M1 Acute Myelogenous Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Myeloid Leukemia without Maturation
M1 Acute Myeloblastic Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
FAB M1
Acute Myelogenous Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
Acute Granulocytic Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
Acute Granulocytic Leukemia without Maturation
Acute Myeloid Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
Acute Myeloid Leukemia without Maturation (FAB M1)
M1 Acute Granulocytic Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Myelocytic Leukemia without Maturation
M1 Acute Myelogenous Leukemia
M1 Acute Myeloid Leukemia
AML without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
An acute myeloid leukemia (AML) characterized by blasts without evidence of maturation to more mature neutrophils. The patients present with anemia, neutropenia, and thrombocytopenia. This type of AML usually follows an aggressive clinical course. (WHO, 2001)
M1 Acute Myeloid Leukemia[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Granulocytic Leukemia without Maturation
M1 Acute Myelogenous Leukemia without Maturation
M1 Acute Myeloblastic Leukemia without Maturation
M1 Acute Myelocytic Leukemia[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Myeloblastic Leukemia
FAB M1[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
Acute Myelocytic Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Myeloid Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Granulocytic Leukemia[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
Tomasz Adamusiak
M1 Acute Granulocytic Leukemia
Acute Myelocytic Leukemia without Maturation
CL:0000015
testis - germ cell
male germ cell
James Malone
FMAID:24479
fibula
Tomasz Adamusiak
UMLS:C0596070
American
Tomasz Adamusiak
ES derived NSC
neural stem cells experimentally derived from ES cells
embryonic stem cell derived neuronal stem cell
BL41K3
James Malone
SNOMEDCT:427608000
Left ventricular noncompaction (disorder)
Left ventricular noncompaction (disorder)[accessedResource: SNOMEDCT:427608000][accessDate: 04-11-2010]
left ventricular noncompaction
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158634&type=germplasm
CS57610 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158634&type=germplasm
CS57610
James Malone
https://www.cbil.upenn.edu/RADQuerier/php/sampleInfo.php?assay_id=10939&&study_id=3144
http://www.criver.com/fr-FR/ProdServ/ByType/ResModOver/ResMod/Pages/NOD_SCID_mouse_J.aspx
Nonobese diabetic (NOD) mouse strain which is homozygous for the scid mutation.
NOD.scid
Tomasz Adamusiak
Jie Zheng
PO:0009029
The floral organ that produces pollen; consisting of an anther and filament.[accessedResource: BTO:0001559][accessDate: 04-11-2010]
BTO:0001559
ZEA:0015134
MAT:0000515
GRO:0005583
James Malone
stamen
GRO:0005583[accessedResource: BTO:0001559][accessDate: 04-11-2010]
The floral organ that produces pollen; consisting of an anther and filament.
SW480
James Malone
Ele Holloway
embryonic day 11.5
Tomasz Adamusiak
Jie Zheng
Neurofibromatosis syndrome (disorder)[accessedResource: DOID:8712][accessDate: 04-11-2010]
neurofibromatosis
DOID:8712
An autosomal dominant hereditary neoplastic syndrome. Two distinct clinicopathological entities are recognized: neurofibromatosis type 1 and neurofibromatosis type 2. Neurofibromatosis type 1 is associated with the presence of cafe-au-lait cutaneous lesions, multiple neurofibromas, malignant peripheral nerve sheath tumors, optic nerve gliomas, and bone lesions. Neurofibromatosis type 2 is associated with the presence of schwannomas, meningiomas, and gliomas.
Neurofibromatosis (morphologic abnormality)[accessedResource: DOID:8712][accessDate: 04-11-2010]
NCIt:C6727
Neurofibromatosis (morphologic abnormality)
An autosomal dominant hereditary neoplastic syndrome. Two distinct clinicopathological entities are recognized: neurofibromatosis type 1 and neurofibromatosis type 2. Neurofibromatosis type 1 is associated with the presence of cafe-au-lait cutaneous lesions, multiple neurofibromas, malignant peripheral nerve sheath tumors, optic nerve gliomas, and bone lesions. Neurofibromatosis type 2 is associated with the presence of schwannomas, meningiomas, and gliomas.[accessedResource: NCIt:C6727][accessDate: 04-11-2010]
Tomasz Adamusiak
Neurofibromatosis syndrome (disorder)
middle part of limb[accessedResource: MAT:0000092][accessDate: 04-11-2010]
MA:0002716
zeugopod
The middle part of the limb (e.g. between the elbow and wrist)[accessedResource: MAT:0000092][accessDate: 04-11-2010]
MAT:0000092
James Malone
The middle part of the limb (e.g. between the elbow and wrist)
middle part of limb
goat
http://www.ebi.ac.uk/efo/EFO_0002637
Capra hircus
James Malone
T84
James Malone
Ele Holloway
BT474
James Malone
C7H6O3
o-carboxyphenol
A hydroxybenzoic acid that has formula C7H6O3.
OC(=O)c1ccccc1O
James Malone
http://www.ebi.ac.uk/efo/EFO_0001608
salicylic acid
2-hydroxybenzoic acid
InChIKey=YGSDEFSMJLZEOE-BGGKNDAXCM
CHEBI:16914
ortho-Hydroxylated benzoic acid.
o-hydroxybenzoic acid
2-carboxyphenol
InChI=1/C7H6O3/c8-6-4-2-1-3-5(6)7(9)10/h1-4,8H,(H,9,10)/f/h9H
MDAMB468
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#fl[accessedResource: MO_721][accessDate: 04-11-2010]
MO_721
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#fl
true
A femtoliter is a volume unit which is equal to 10^-15 L.
Tomasz Adamusiak
Jie Zheng
fl
femtoliter
James Malone
A volume unit which is equal to 10^[-12] L.
Mental and behavioral disorder due to use of cocaine: dependence syndrome (disorder)
Cocaine dependence (disorder)
Cocaine dependence, unspecified (disorder)
Cocaine dependence (disorder)[accessedResource: DOID:9975][accessDate: 04-11-2010]
Cocaine drug dependence NOS (disorder)
DOID:9975
Cocaine dependence, unspecified use
Cocaine dependence
cocaine addiction
Cocaine Dependence[accessedResource: DOID:9975][accessDate: 04-11-2010]
Cocaine dependence, unspecified use[accessedResource: DOID:9975][accessDate: 04-11-2010]
Ele Holloway
Mental and behavioral disorder due to use of cocaine: dependence syndrome (disorder)[accessedResource: DOID:9975][accessDate: 04-11-2010]
Tomasz Adamusiak
Cocaine drug dependence NOS (disorder)[accessedResource: DOID:9975][accessDate: 04-11-2010]
Cocaine dependence, unspecified (disorder)[accessedResource: DOID:9975][accessDate: 04-11-2010]
An attomole is a substance unit equal to 10^-18 mol.
MO_977
Tomasz Adamusiak
A substance unit equal to 10^[-18] mol.
http://www.ebi.ac.uk/efo/EFO_0001793
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#amol
attomole
amol
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#amol[accessedResource: MO_977][accessDate: 04-11-2010]
Jie Zheng
true
James Malone
C57BL/6 is a mouse strain as described in Jackson Laboratory http://www.informatics.jax.org/external/festing/mouse/docs/C57BL.shtml
obsolete_C57BL/6
duplicate of EFO_0000606
NIFSTD:birnlex_398
2.5
Tomasz Adamusiak
true
http://www.informatics.jax.org/external/festing/mouse/docs/C57BL.shtml
Ele Holloway
Human colon carcinoma cell line; established from the primary colon carcinoma of an adult man.
BTO:0002254
HCT116
HCT-116 cell
HCT-116 cell[accessedResource: BTO:0002254][accessDate: 04-11-2010]
James Malone
HCT116 cell
HCT116 cell[accessedResource: BTO:0002254][accessDate: 04-11-2010]
Human colon carcinoma cell line; established from the primary colon carcinoma of an adult man.[accessedResource: BTO:0002254][accessDate: 04-11-2010]
YCC1
James Malone
Ele Holloway
Spinocerebellar ataxia (disorder)[accessedResource: DOID:1441][accessDate: 04-11-2010]
Spinocerebellar Atrophy[accessedResource: NIFSTD:birnlex_12648][accessDate: 04-11-2010]
Spinocerebellar Ataxias
A group of dominantly inherited, predominatly late-onset, cerebellar ataxias which have been divided into multiple subtypes based on clinical features and genetic mapping. Progressive ataxia is a central feature of these conditions, and in certain subtypes POLYNEUROPATHY; DYSARTHRIA; visual loss; and other disorders may develop (MeSH).
Ele Holloway
Spinocerebellar Atrophy
Dominantly-Inherited Spinocerebellar Ataxia
Spinocerebellar ataxia (disorder)
Tomasz Adamusiak
A group of dominantly inherited, predominatly late-onset, cerebellar ataxias which have been divided into multiple subtypes based on clinical features and genetic mapping. Progressive ataxia is a central feature of these conditions, and in certain subtypes POLYNEUROPATHY; DYSARTHRIA; visual loss; and other disorders may develop (MeSH).[accessedResource: NIFSTD:birnlex_12648][accessDate: 04-11-2010]
NIFSTD:birnlex_12648
DOID:1441
Dominantly-Inherited Spinocerebellar Ataxia[accessedResource: NIFSTD:birnlex_12648][accessDate: 04-11-2010]
spinocerebellar ataxia
http://www.arabidopsis.org/servlets/TairObject?id=1005158642&type=germplasm
CS57618 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158642&type=germplasm
CS57618
James Malone
Infection, Streptococcus pneumoniae[accessedResource: MSH:D011008][accessDate: 04-11-2010]
DOID:9805
STREP PNEUMONIAE INFECT[accessedResource: MSH:D011008][accessDate: 04-11-2010]
James Malone
Infections with bacteria of the species STREPTOCOCCUS PNEUMONIAE.
Pneumococcal Infections
pneumoniae Infections, Streptococcus
INFECT PNEUMOCOCCAL
SNOMEDCT:16814004
pneumococcal infectious disease
Infections, Pneumococcal[accessedResource: MSH:D011008][accessDate: 04-11-2010]
Infections with bacteria of the species STREPTOCOCCUS PNEUMONIAE.[accessedResource: MSH:D011008][accessDate: 04-11-2010]
Pneumococcal infectious disease, NOS
STREP PNEUMONIAE INFECT
MSH:D011008
PNEUMOCOCCAL INFECT[accessedResource: MSH:D011008][accessDate: 04-11-2010]
Pneumococcal infectious disease[accessedResource: SNOMEDCT:16814004][accessDate: 04-11-2010]
Pneumococcal infection, NOS
Pneumococcal infectious disease (disorder)[accessedResource: SNOMEDCT:16814004][accessDate: 04-11-2010]
Pneumococcal infectious disease (disorder)
Pneumococcal infectious disease, NOS[accessedResource: SNOMEDCT:16814004][accessDate: 04-11-2010]
Pneumococcal infection, NOS[accessedResource: SNOMEDCT:16814004][accessDate: 04-11-2010]
Infections, Streptococcus pneumoniae[accessedResource: MSH:D011008][accessDate: 04-11-2010]
GeneRIF:12569171
pneumoniae Infection, Streptococcus
pneumococcal infection
Capan-1
Capan1
James Malone
Ele Holloway
There is possible overlap here with sample and perhaps should be merged.
The physical site from which tissue has been removed from a living organism. Does not imply any statistical significance, i.e. that it is a statistically representative sample of the whole.
biopsy site
James Malone
D10.G4.1
James Malone
Ele Holloway
MAT:0000483
A dorsal fin
A geometric modifier is an anatomical modifier which describes some quality about the geometric position of some organism part.
geometric modifier
James Malone
eastern European house mouse
Mus musculus hortulanus
http://www.ebi.ac.uk/efo/EFO_0002648
Mus musculus musculus
James Malone
ZFS:0000027
segmentation 20-25 somites
James Malone
true
A base unit which is a standard measure of the amount of matter/energy of a physical object.
MO_11
mass unit
James Malone
Jie Zheng
MassUnitOther[accessedResource: MO_11][accessDate: 04-11-2010]
A mass unit is a base unit which is a standard measure of the amount of matter/energy of a physical object.
MassUnitOther
http://www.ebi.ac.uk/efo/EFO_0001679
Tomasz Adamusiak
MO_149
http://www.arabidopsis.org/servlets/TairObject?id=1005158651&type=germplasm
CS57627 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158651&type=germplasm
CS57627
James Malone
James Malone
immune cell[accessedResource: CL:0000738][accessDate: 04-11-2010]
PMN cell
polymorphonuclear cell[accessedResource: BTO:0000751][accessDate: 04-11-2010]
PMN cell[accessedResource: BTO:0000751][accessDate: 04-11-2010]
leucocyte[accessedResource: CL:0000738][accessDate: 04-11-2010]
leucocyte
Any of the blood cells that are colorless, lack hemoglobin, contain a nucleus, and include the lymphocytes, monocytes, neutrophils, eosinophils, and basophils.
An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue.[accessedResource: CL:0000738][accessDate: 04-11-2010]
CL:0000738
white blood cell[accessedResource: CL:0000738][accessDate: 04-11-2010]
polymorphonuclear cell
white blood cell
Any of the blood cells that are colorless, lack hemoglobin, contain a nucleus, and include the lymphocytes, monocytes, neutrophils, eosinophils, and basophils.[accessedResource: BTO:0000751][accessDate: 04-11-2010]
BTO:0000751
A nucleated cell of the myeloid or lymphoid lineages, found in blood or other tissue.
immune cell
leukocyte
An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue.
U266B1
James Malone
Ele Holloway
MAT:0000491
proximal tibia
Proximal is a geometric modifier describing the point at which an appendage joins the body or the point nearest to some point of origin, for example proximal tibia.
proximal
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#liquid_handler[accessedResource: MO_868][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0002021
A liquid_handler is an instrument used for automated liquid transfer and handling.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#liquid_handler
James Malone
MO_868
liquid_handling_instrument
liquid handler
http://www.taconic.com/wmspage.cfm?parm1=757
Goto-Kakizaki is a rat strain as described in http://www.taconic.com/wmspage.cfm?parm1=757
Goto-Kakizaki
James Malone
Diseases of Endocrine System[accessedResource: MSH:D004700][accessDate: 04-11-2010]
MSH:D004700
ENDOCRINE DISORDER NOS[accessedResource: ICD9:259.9][accessDate: 04-11-2010]
Endocrine Diseases and Manifestations[accessedResource: NCIt:C3009][accessDate: 04-11-2010]
Disorder of endocrine gland
ENDOCRINE SYSTEM DIS
ENDOCRINE DISORDERS[accessedResource: NCIt:C3009][accessDate: 04-11-2010]
SNOMEDCT:267489000
Endocrine System Diseases[accessedResource: MSH:D004700][accessDate: 04-11-2010]
Pathological processes of the ENDOCRINE GLANDS, and diseases resulting from abnormal level of available HORMONES.
Endocrinopathy[accessedResource: SNOMEDCT:362969004][accessDate: 04-11-2010]
SNOMEDCT:362969004
endocrine system disease
Endocrine gland disease NOS (disorder)[accessedResource: SNOMEDCT:267475005][accessDate: 04-11-2010]
Endocrine disturbance
Endocrinopathy, NOS
Any deviation from the normal structure or function of the endocrine system that is manifested by a characteristic set of symptoms and signs.[accessedResource: NCIt:C3009][accessDate: 04-11-2010]
Non-Neoplastic Endocrine Disorder
Endocrine Disorder[accessedResource: NCIt:C3009][accessDate: 04-11-2010]
Endocrine System Diseases
Endocrine disease
Endocrine disorder NOS (disorder)
Endocrine disturbance[accessedResource: SNOMEDCT:362969004][accessDate: 04-11-2010]
ENDOCRINE DIS
Hormone disturbance NOS
Endocrine disease[accessedResource: SNOMEDCT:362969004][accessDate: 04-11-2010]
NCIt:C27565
GeneRIF:15296474
Diseases of Endocrine System
Endocrine gland disease NOS (disorder)
GeneRIF:15736104
Hormone abnormality[accessedResource: SNOMEDCT:84452004][accessDate: 04-11-2010]
Disorder of endocrine gland[accessedResource: SNOMEDCT:362969004][accessDate: 04-11-2010]
Unspecified endocrine disorder[accessedResource: ICD9:259.9][accessDate: 04-11-2010]
Endocrine disorder NOS (disorder)[accessedResource: SNOMEDCT:190594008][accessDate: 04-11-2010]
GeneRIF:15240634
Endocrine disturbance NOS (disorder)
Any deviation from the normal structure or function of the endocrine system that is manifested by a characteristic set of symptoms and signs.
NCIt:C3009
Unspecified endocrine disorder
Disorder of endocrine system (disorder)
Disorder of endocrine system[accessedResource: SNOMEDCT:362969004][accessDate: 04-11-2010]
ENDOCRINE DIS[accessedResource: MSH:D004700][accessDate: 04-11-2010]
ICD9:259.9
ENDOCRINE DISORDERS
Hormone abnormality (finding)
SNOMEDCT:267475005
DIS ENDOCRINE SYSTEM[accessedResource: MSH:D004700][accessDate: 04-11-2010]
Hormone abnormality (finding)[accessedResource: SNOMEDCT:84452004][accessDate: 04-11-2010]
Disease of endocrine gland
Endocrine disturbance NOS (disorder)[accessedResource: SNOMEDCT:267489000][accessDate: 04-11-2010]
Endocrine disturbance NOS
Diseases, Endocrine[accessedResource: MSH:D004700][accessDate: 04-11-2010]
Hormone abnormality
Disorder of endocrine system
James Malone
Endocrine gland disease NOS[accessedResource: SNOMEDCT:267475005][accessDate: 04-11-2010]
Hormone disorders
Hormone disturbance
Disorder of endocrine system (disorder)[accessedResource: SNOMEDCT:362969004][accessDate: 04-11-2010]
Endocrine Diseases
GeneRIF:15132716
Non-Neoplastic Endocrine Disorder[accessedResource: NCIt:C27565][accessDate: 04-11-2010]
Endocrinopathy
Endocrine Diseases and Manifestations
Endocrine disturbance NOS[accessedResource: SNOMEDCT:267489000][accessDate: 04-11-2010]
Endocrine gland disease NOS
SNOMEDCT:84452004
Endocrine disorder
DOID:28
Pathological processes of the ENDOCRINE GLANDS, and diseases resulting from abnormal level of available HORMONES.[accessedResource: MSH:D004700][accessDate: 04-11-2010]
ENDOCRINE DISORDER NOS
Disease of endocrine gland[accessedResource: SNOMEDCT:362969004][accessDate: 04-11-2010]
Hormone disturbance[accessedResource: SNOMEDCT:362969004][accessDate: 04-11-2010]
SNOMEDCT:190594008
MEC1
James Malone
Ele Holloway
DOID:6188
iatrogenic Kaposi's sarcoma
Tomasz Adamusiak
Ele Holloway
C4II
James Malone
Ele Holloway
DOID:2631
serous microcystic adenoma
serous cystadenoma
serous Cystoma[accessedResource: DOID:2631][accessDate: 04-11-2010]
James Malone
serous microcystic adenoma[accessedResource: DOID:2631][accessDate: 04-11-2010]
serous Cystoma
Ele Holloway
serous cystadenoma NOS (morphologic abnormality)
serous cystadenoma NOS (morphologic abnormality)[accessedResource: DOID:2631][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0002409
James Malone
Haemin
protohemin
CHEBI:50385
InChIKey=BTIJJDXEELBZFS-MXZCRJNTDE
chloro[3,7,12,17-tetramethyl-8,13-divinylporphyrin-2,18-dipropanoato(2-)]iron(III)
chlorido(protoporphyrinato)iron(III)
chloro(protoporphyrinato)iron(III)
A heme b that has formula C34H32ClFeN4O4.
CC1=C(CCC(O)=O)C2=[N]3C1=Cc1c(C)c(C=C)c4C=C5C(C)=C(C=C)C6=[N]5[Fe]3(Cl)(n14)n1c(=C6)c(C)c(CCC(O)=O)c1=C2
hemin
InChI=1/C34H34N4O4.ClH.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);1H;/q;;+3/p-3/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;;/fC34H32N4O4.Cl.Fe/h39,41H;1h;/q-2;-1;m
Ele Holloway
hemine
C34H32ClFeN4O4
enzyme inhibitors
inhibidores enzimaticos
enzyme inhibitor
inhibidor enzimatico
CHEBI:23924
A compound or agent that combines with an enzyme in such a manner as to prevent the normal substrate-enzyme combination and the catalytic reaction.
inhibiteurs enzymatiques
http://www.ebi.ac.uk/efo/EFO_0001822
James Malone
inhibiteur enzymatique
Cranial Nerve X[accessedResource: NCIt:C12812][accessDate: 04-11-2010]
Tomasz Adamusiak
Tenth Cranial Nerve[accessedResource: NCIt:C12812][accessDate: 04-11-2010]
NCIt:C12812
Jie Zheng
Pneumogastric Nerve[accessedResource: NCIt:C12812][accessDate: 04-11-2010]
Tenth Cranial Nerve
Cranial Nerve X
Pneumogastric Nerve
vagus nerve
MO_641
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#technical_replicate
A technical replicate is a replicate role where the same BioSample is use e.g. the same pool of RNA used to assess technical (as opposed to biological) variation within an experiment.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#technical_replicate[accessedResource: MO_641][accessDate: 04-11-2010]
technical replicate
James Malone
STI 571
C29H31N7O
InChI=1/C29H31N7O/c1-21-5-10-25(18-27(21)34-29-31-13-11-26(33-29)24-4-3-12-30-19-24)32-28(37)23-8-6-22(7-9-23)20-36-16-14-35(2)15-17-36/h3-13,18-19H,14-17,20H2,1-2H3,(H,32,37)(H,31,33,34)/f/h32,34H
CN1CCN(CC1)Cc1ccc(cc1)C(=O)Nc1ccc(C)c(Nc2nccc(n2)-c2cccnc2)c1
CHEBI:45783
James Malone
imatinib
alpha-(4-methyl-1-piperazinyl)-3'-((4-(3-pyridyl)-2-pyrimidinyl)amino)-p-toluidide
A N-methylpiperazine that has formula C29H31N7O.
4-[(4-methylpiperazin-1-yl)methyl]-N-{4-methyl-3-[(4-pyridin-3-ylpyrimidin-2-yl)amino]phenyl}benzamide
http://www.ebi.ac.uk/efo/EFO_0001555
InChIKey=KTUFNOKKBVMGRW-RPGFEBOUCX
4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE
NCI-H23
James Malone
Ele Holloway
Amygdaloid Nucleus[accessedResource: NCIt:C12440][accessDate: 04-11-2010]
Tomasz Adamusiak
amygdala central nucleus
amygdala
MAT:0000289
corpus amygdaloideum
archistriatum
Subdivision of basal ganglion of telencephalon which is an almond-shaped gray mass in the dorsomedial part of the temporal lobe.
Subcortical brain region lying anterior to the hippocampal formation in the temporal lobe and anterior to the temporal horn of the lateral ventricle in some species. It is usually subdivided into several groups. Functionally, it is not considered a unitary structure (MM).[accessedResource: NIFSTD:birnlex_1241][accessDate: 04-11-2010]
NCIt:C12440
archistriatum[accessedResource: NIFSTD:birnlex_1241][accessDate: 04-11-2010]
Subcortical brain region lying anterior to the hippocampal formation in the temporal lobe and anterior to the temporal horn of the lateral ventricle in some species. It is usually subdivided into several groups. Functionally, it is not considered a unitary structure (MM).
nucleus amygdalae
An almond-shaped group of basal nuclei anterior to the inferior horn of the lateral ventricle of the brain, within the temporal lobe. The amygdala is part of the limbic system. (MeSH)
The one of the four basal ganglia in each cerebral hemisphere that is part of the limbic system and consists of an almond-shaped mass of gray matter in the anterior extremity of the temporal lobe.
SAEL:4
BTO:0001042
Amygdaloid nuclear groups
EV:0100189
The one of the four basal ganglia in each cerebral hemisphere that is part of the limbic system and consists of an almond-shaped mass of gray matter in the anterior extremity of the temporal lobe.[accessedResource: BTO:0001042][accessDate: 04-11-2010]
Amygdaloid nuclear groups[accessedResource: FMAID:61841][accessDate: 04-11-2010]
An almond-shaped group of basal nuclei anterior to the inferior horn of the lateral ventricle of the brain, within the temporal lobe. The amygdala is part of the limbic system. (MeSH)[accessedResource: NCIt:C12440][accessDate: 04-11-2010]
FMAID:61841
amygdaloid complex
Amygdaloid nuclear complex
Amygdaloid Body
nucleus amygdalae[accessedResource: BTO:0001042][accessDate: 04-11-2010]
corpus amygdaloideum[accessedResource: BTO:0001042][accessDate: 04-11-2010]
Amygdaloid complex[accessedResource: NIFSTD:birnlex_1241][accessDate: 04-11-2010]
Amygdaloid nuclear complex[accessedResource: FMAID:61841][accessDate: 04-11-2010]
NIFSTD:birnlex_1241
James Malone
MA:0000887
Amygdaloid Nucleus
Amygdaloid Body[accessedResource: NCIt:C12440][accessDate: 04-11-2010]
http://www.arabidopsis.org/servlets/TairObject?id=1005158867&type=germplasm
CS57843 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158867&type=germplasm
CS57843
James Malone
ST486
James Malone
Ele Holloway
periaqueductal gray
James Malone
CHEBI:35444
A substance used in the treatment or control of nematode infestations.
antinematodal agent
http://www.ebi.ac.uk/efo/EFO_0001835
antinematodals
antinematodal drug
antinematodal drugs
A Kc is a cell line.
A Kc derives from a drosophila melanogaster.
Kc
Natural Language Generator 8th April 2010
James Malone
Ele Holloway
Pilocytic Astrocytoma, Juvenile[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytoma, Cerebral[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Subependymal Giant Cell Astrocytoma
GeneRIF:15799819
GeneRIF:12023424
Pilocytic Astrocytomas
GeneRIF:12111824
Astrocytomas, Grade I[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytic glioma[accessedResource: SNOMEDCT:38713004][accessDate: 04-11-2010]
astrocytoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:3069][accessDate: 04-11-2010]
Oligoastrocytoma, Mixed
Tomasz Adamusiak
Grade I Astrocytomas
GeneRIF:15178645
Astrocytomas[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytomas, Intracranial
Astrocytic tumor of brain[accessedResource: SNOMEDCT:254938000][accessDate: 04-11-2010]
NIFSTD:birnlex_12619
GeneRIF:14729615
Astrogliomas[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytomas, Cerebral[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytoma, Anaplastic[accessedResource: MSH:D001254][accessDate: 04-11-2010]
GeneRIF:12740910
GeneRIF:15652402
GeneRIF:14603438
Subependymal Giant Cell Astrocytoma[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Childhood Cerebral Astrocytoma[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Gliomas, Astrocytic[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Intracranial Astrocytomas[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Glioma, Astrocytic
Cerebral Astrocytoma
Childhood Cerebral Astrocytomas
Astrocytomas, Grade III[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astroglioma[accessedResource: NIFSTD:birnlex_12619][accessDate: 04-11-2010]
Astrocytoma, NOS[accessedResource: SNOMEDCT:38713004][accessDate: 04-11-2010]
Astrocytoma, low grade[accessedResource: SNOMEDCT:38713004][accessDate: 04-11-2010]
GeneRIF:15494521
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation (MeSH).[accessedResource: NIFSTD:birnlex_12619][accessDate: 04-11-2010]
Mixed Oligoastrocytomas[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytomas, Anaplastic[accessedResource: MSH:D001254][accessDate: 04-11-2010]
GeneRIF:11922706
Astrocytic Neoplasm
GeneRIF:14654927
Astrogliomas
Astrocytoma of brain
Astrocytic tumor of brain
Astrocytoma, no ICD-O subtype[accessedResource: SNOMEDCT:38713004][accessDate: 04-11-2010]
Astrocytomas, Protoplasmic[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Diffuse astrocytoma
Astrocytoma of brain (disorder)
Intracranial Astrocytoma
GeneRIF:15643521
DOID:3069
Astrocytoma of brain[accessedResource: SNOMEDCT:254938000][accessDate: 04-11-2010]
Astrocytoma, NOS
Astrocytomas, Grade III
Astrocytic Tumor
Astrocytic tumour of brain[accessedResource: SNOMEDCT:254938000][accessDate: 04-11-2010]
[M]Astrocytoma NOS
astrocytoma, no ICD-O subtype (morphologic abnormality)
Astrocytoma, Grade I[accessedResource: MSH:D001254][accessDate: 04-11-2010]
GeneRIF:15973775
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation. (From Devita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2013-7; Holland et al., Cancer Medicine, 3d ed, p1082)
Astrocytoma, Gemistocytic[accessedResource: MSH:D001254][accessDate: 04-11-2010]
SNOMEDCT:38713004
Diffuse astrocytoma, low grade
Astrocytoma, low grade
SNOMEDCT:254938000
Fibrillary Astrocytomas
GeneRIF:12916719
Cystic astrocytoma
GeneRIF:12819022
GeneRIF:12385586
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation (MeSH).
Astrocytoma, Grade II[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Fibrillary Astrocytoma[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytoma, Pilocytic
GeneRIF:12747804
Pilocytic Astrocytoma[accessedResource: MSH:D001254][accessDate: 04-11-2010]
GeneRIF:12168116
Astrocytomas, Anaplastic
Astrocytic Tumor[accessedResource: NCIt:C6958][accessDate: 04-11-2010]
Protoplasmic Astrocytomas
Astrocytoma, Grade III
GeneRIF:12237771
Astrocytoma, no ICD-O subtype
Astrocytomas, Grade II
Astrocytomas, Gemistocytic
Cerebral Astrocytoma, Childhood
Pilocytic Astrocytomas[accessedResource: MSH:D001254][accessDate: 04-11-2010]
GeneRIF:12185598
Astrocytomas, Fibrillary[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Grade III Astrocytoma[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Grade I Astrocytoma
astroglioma
Cerebral Astrocytomas, Childhood[accessedResource: MSH:D001254][accessDate: 04-11-2010]
GeneRIF:12519873
Astrocytomas, Gemistocytic[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytoma, Juvenile Pilocytic
A glial tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, subependymal giant cell astrocytoma, and glioblastoma.
Diffuse astrocytoma[accessedResource: SNOMEDCT:38713004][accessDate: 04-11-2010]
GeneRIF:12850541
Astrocytic Gliomas
Protoplasmic Astrocytoma
MSH:D001254
GeneRIF:12203396
astrocytoma
Astrocytomas, Grade II[accessedResource: MSH:D001254][accessDate: 04-11-2010]
GeneRIF:12435805
Astrocytoma of brain (disorder)[accessedResource: SNOMEDCT:254938000][accessDate: 04-11-2010]
Astrocytoma, Gemistocytic
[M]Astrocytoma NOS[accessedResource: SNOMEDCT:38713004][accessDate: 04-11-2010]
GeneRIF:11783119
Astrocytomas, Juvenile Pilocytic
Anaplastic Astrocytoma
GeneRIF:16103883
Astrocytic tumour of brain
GeneRIF:15289301
James Malone
Astrocytomas
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation. (From Devita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2013-7; Holland et al., Cancer Medicine, 3d ed, p1082)[accessedResource: MSH:D001254][accessDate: 04-11-2010]
GeneRIF:12133571
Astrocytomas, Cerebral
Cystic astrocytoma[accessedResource: SNOMEDCT:38713004][accessDate: 04-11-2010]
GeneRIF:11836615
Astrocytic Neoplasm[accessedResource: NCIt:C6958][accessDate: 04-11-2010]
GeneRIF:15902504
NCIt:C6958
Fibrillary Astrocytoma
Oligoastrocytomas, Mixed
GeneRIF:12077339
Astrocytoma, Protoplasmic[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Intracranial Astrocytoma[accessedResource: MSH:D001254][accessDate: 04-11-2010]
A glial tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, subependymal giant cell astrocytoma, and glioblastoma.[accessedResource: NCIt:C6958][accessDate: 04-11-2010]
Grade II Astrocytoma
GeneRIF:11958417
GeneRIF:12393263
Astrocytomas, Juvenile Pilocytic[accessedResource: MSH:D001254][accessDate: 04-11-2010]
GeneRIF:12829373
Diffuse astrocytoma, low grade[accessedResource: SNOMEDCT:38713004][accessDate: 04-11-2010]
Mixed Oligoastrocytoma[accessedResource: MSH:D001254][accessDate: 04-11-2010]
AGS
James Malone
Ele Holloway
MAT:0000489
left arm
Left is a geometric modifier describing something which is to the left of the median of an organism or organism part, for example left arm.
left
James Malone
http://jaxmice.jax.org/strain/002248.html
NIFSTD:birnlex_106
129S1/SvImJ
Tomasz Adamusiak
James Malone
JAX:100010
B6C3F1 is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/100010.html
B6C3F1
James Malone
CAMA1
James Malone
PO:0020121
lateral root
acute Endocarditis
A heart disease involving non-infectious inflammation of the endocardium (inner layer of the heart).
acute endocarditis, unspecified[accessedResource: DOID:10314][accessDate: 04-11-2010]
DOID:10314
Endocarditides[accessedResource: MSH:D004696][accessDate: 04-11-2010]
Endocarditis (disorder)
Inflammation of the inner lining of the heart (ENDOCARDIUM), the continuous membrane lining the four chambers and HEART VALVES. It is often caused by microorganisms including bacteria, viruses, fungi, and rickettsiae. Left untreated, endocarditis can damage heart valves and become life-threatening.
Endocarditides, Infective[accessedResource: MSH:D004696][accessDate: 04-11-2010]
acute endocarditis (disorder)
acute endocarditis, unspecified
Inflammation of the endocardium.[accessedResource: NCIt:C34582][accessDate: 04-11-2010]
Endocarditis (disorder)[accessedResource: DOID:10314][accessDate: 04-11-2010]
acute endocarditis NOS (disorder)
Inflammation of the endocardium.
SNOMEDCT:56819008
endocarditis
non-infective endocarditis
A heart disease involving non-infectious inflammation of the endocardium (inner layer of the heart).[accessedResource: DOID:10314][accessDate: 04-11-2010]
Endocarditis, Infective[accessedResource: MSH:D004696][accessDate: 04-11-2010]
Endocarditides
Endocarditis NOS
acute Endocarditis[accessedResource: DOID:10314][accessDate: 04-11-2010]
Endocarditis, Infective
acute endocarditis NOS (disorder)[accessedResource: DOID:10314][accessDate: 04-11-2010]
Inflammation of the inner lining of the heart (ENDOCARDIUM), the continuous membrane lining the four chambers and HEART VALVES. It is often caused by microorganisms including bacteria, viruses, fungi, and rickettsiae. Left untreated, endocarditis can damage heart valves and become life-threatening.[accessedResource: MSH:D004696][accessDate: 04-11-2010]
MSH:D004696
Endocarditis, NOS[accessedResource: SNOMEDCT:56819008][accessDate: 04-11-2010]
acute endocarditis (disorder)[accessedResource: DOID:10314][accessDate: 04-11-2010]
James Malone
NCIt:C34582
Endocarditides, Infective
Wikipedia: http://en.wikipedia.org/wiki/Congenital_absence_of_the_vas_deferens
Congenital bilateral absence of the vas deferens (CAVD) is a condition in which the two vas deferens, male reproductive organs, fail to form properly prior to birth.
congenital bilateral absence of the vas deferens
James Malone
true
obsolete_percent oxygen
peripheral nerve[accessedResource: MAT:0000099][accessDate: 04-11-2010]
Tomasz Adamusiak
SAEL:81
A neuron that is part of nerve found outside the central nervous system.
PNS - somatic
Peripheral nervous system
peripheral neuron[accessedResource: CL:0000111][accessDate: 04-11-2010]
peripheral nervous system - human
PNS - somatic[accessedResource: MAT:0000099][accessDate: 04-11-2010]
ZFA:0000070
MA:0000230
peripheral nervous system - human[accessedResource: MAT:0000099][accessDate: 04-11-2010]
peripheral neuron
peripheral nerve
James Malone
somatic nervous system
WBbt:0005760
CL:0000111
FMAID:9903
sensory axons peripheral
MAT:0000099
sensory axons peripheral[accessedResource: ZFA:0000070][accessDate: 04-11-2010]
A neuron that is part of nerve found outside the central nervous system.[accessedResource: CL:0000111][accessDate: 04-11-2010]
Peripheral nervous system[accessedResource: FMAID:9903][accessDate: 04-11-2010]
NIFSTD:birnlex_2103
toxins
http://www.ebi.ac.uk/efo/EFO_0001629
Poisonous substance produced by a biological organism such as a microbe, animal or plant.
toxin
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158740&type=germplasm
CS57716 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158740&type=germplasm
CS57716
James Malone
http://www.ebi.ac.uk/efo/EFO_0002030
A normalization data transformation is a data transformation that has objective normalization.
normalization data transformation
James Malone
James Malone
BTO:0001419
urine
Waste material that is secreted by the kidney in vertebrates, is rich in end products of protein metabolism together with salts and pigments, and forms a clear amber and usually slightly acid fluid in mammals but is semisolid in birds and reptiles.
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#urine[accessedResource: MO_399][accessDate: 04-11-2010]
Waste material that is secreted by the kidney in vertebrates, is rich in end products of protein metabolism together with salts and pigments, and forms a clear amber and usually slightly acid fluid in mammals but is semisolid in birds and reptiles.[accessedResource: BTO:0001419][accessDate: 04-11-2010]
MO_399
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#urine
Jie Zheng
pre-mortem
alive
Principal body part subdivision
anatomical site
Principal body part subdivision[accessedResource: FMAID:67504][accessDate: 04-11-2010]
Subdivision of cardinal body part
TAO:0001308
body part
organism subdivision[accessedResource: MAT:0000293][accessDate: 04-11-2010]
anatomical site[accessedResource: MAT:0000293][accessDate: 04-11-2010]
Anatomical structure which is a primary subdivision of whole organism. The mereological sum of these is the whole organism.[accessedResource: TAO:0001308][accessDate: 04-11-2010]
organism subdivision
MAT:0000293
animal body part
FMAID:67504
EV:0100008
James Malone
XAO:0003013
Anatomical structure, which is a subdivision of a cardinal body part; it may exclude bones; is demarcated from other subdivisions of the same cardinal body part by anatomical surfaces or lines or topographical references; together with other contiguous subdivisions of the same cardinal body part, it constitutes a cardinal body part. Examples: thorax, perineum, back of neck, forearm, hand, phalanx, nose, auricle of ear, scrotum.
body part[accessedResource: MAT:0000293][accessDate: 04-11-2010]
Subdivision of cardinal body part[accessedResource: FMAID:67504][accessDate: 04-11-2010]
Anatomical structure which is a primary subdivision of whole organism. The mereological sum of these is the whole organism.
COC(=O)Nc1nc2cc(ccc2[nH]1)C(=O)c1cccs1
nocodazol
methyl [5-(2-thienylcarbonyl)-1H-benzimidazol-2-yl]carbamate
N-(5-(2-thenoyl)-2-benzimidazolyl)carbamic acid methyl ester
C14H11N3O3S
http://www.ebi.ac.uk/efo/EFO_0001580
InChIKey=KYRVNWMVYQXFEU-KJQBJTEXCI
CHEBI:34892
A thiophene that has formula C14H11N3O3S.
nocodazolum
(5-(2-thienylcarbonyl)-1H-benzimidazol-2-yl)-carbamic acid methyl ester
methyl (5-(2-thienylcarbonyl))-1H-benzimidazole-2-ylcarbamate
InChI=1/C14H11N3O3S/c1-20-14(19)17-13-15-9-5-4-8(7-10(9)16-13)12(18)11-3-2-6-21-11/h2-7H,1H3,(H2,15,16,17,19)/f/h15,17H
nocodazole
Duplicate use EFO_0000900
NCIt:C12462
Ganglion with sensory function within the vertebral column.[accessedResource: NCIt:C12462][accessDate: 10-05-2010]
true
obsolete_dorsal root ganglion
Sensory ganglia located on the dorsal spinal roots within the vertebral column. (MeSH)
Ganglion with sensory function within the vertebral column.
Dorsal Root Ganglion
mature basophil
neutrophilic leucocyte[accessedResource: CL:0000775][accessDate: 04-11-2010]
polymorphonuclear neutrophil
CL:0000043
polynuclear neutrophilic leucocyte[accessedResource: CL:0000775][accessDate: 04-11-2010]
neutrophil
A fully differentiated basophil, a granular leukocyte with an irregularly shaped, pale-staining nucleus that is partially constricted into two lobes, and with cytoplasm that contains coarse granules of variable size. Basophils contain vasoactive amines such as histamine and serotonin, which are released on appropriate stimulation.[accessedResource: CL:0000043][accessDate: 04-11-2010]
polymorphonuclear leukocyte
neutrophil leucocyte
A fully differentiated basophil, a granular leukocyte with an irregularly shaped, pale-staining nucleus that is partially constricted into two lobes, and with cytoplasm that contains coarse granules of variable size. Basophils contain vasoactive amines such as histamine and serotonin, which are released on appropriate stimulation.
polynuclear neutrophilic leukocyte[accessedResource: CL:0000775][accessDate: 04-11-2010]
poly
neutrophil leukocyte[accessedResource: CL:0000775][accessDate: 04-11-2010]
polymorphonuclear leukocyte[accessedResource: CL:0000043][accessDate: 04-11-2010]
neutrophil leukocyte
polymorphonuclear neutrophil[accessedResource: CL:0000775][accessDate: 04-11-2010]
Tomasz Adamusiak
neutrophilic leucocyte
mature basophil leukocyte[accessedResource: CL:0000043][accessDate: 04-11-2010]
mature basophil leukocyte
PMN
Ele Holloway
mature basophil leucocyte
Any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes.[accessedResource: CL:0000775][accessDate: 04-11-2010]
A fully differentiated basophil, a granular leukocyte with an irregularly shaped, pale-staining nucleus that is partially constricted into two lobes, and with cytoplasm that contains coarse, bluish-black granules of variable size. Basophils contain vasoactive amines such as histamine and serotonin, which are released on appropriate stimulation.
polynuclear neutrophilic leukocyte
polynuclear neutrophilic leucocyte
neutrophilic leukocyte[accessedResource: CL:0000775][accessDate: 04-11-2010]
neutrocyte[accessedResource: CL:0000775][accessDate: 04-11-2010]
CL:0000775
neutrophil leucocyte[accessedResource: CL:0000775][accessDate: 04-11-2010]
neutrophilic leukocyte
polymorphonuclear leucocyte
PMN[accessedResource: CL:0000775][accessDate: 04-11-2010]
mature basophil[accessedResource: CL:0000043][accessDate: 04-11-2010]
James Malone
neutrocyte
poly[accessedResource: CL:0000775][accessDate: 04-11-2010]
polymorphonuclear leucocyte[accessedResource: CL:0000043][accessDate: 04-11-2010]
Any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes.
mature basophil leucocyte[accessedResource: CL:0000043][accessDate: 04-11-2010]
P2 antEndoP
antMGP2
anterior midgut inclusive primordium
antMGP2[accessedResource: FBbt:00000444][accessDate: 04-11-2010]
anterior midgut primordium
FBbt:00000444
P2 antEndoP[accessedResource: FBbt:00000444][accessDate: 04-11-2010]
James Malone
anterior midgut inclusive primordium[accessedResource: FBbt:00000444][accessDate: 04-11-2010]
alpha-dextrose
alpha-D-glucopyranose
http://www.ebi.ac.uk/efo/EFO_0001482
CHEBI:17925
A D-glucopyranose that has formula C6H12O6.
InChI=1/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6+/m1/s1
OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O
alpha-D-glucose
InChIKey=WQZGKKKJIJFFOK-DVKNGEFBBQ
C6H12O6
Either of a pair of prominent masses of lymphoid tissue that lie one on each side of the throat between the anterior and posterior pillars of the fauces.
Tonsils[accessedResource: NCIt:C12802][accessDate: 04-11-2010]
Adenoids
Tonsils
NCIt:C12802
Either of a pair of prominent masses of lymphoid tissue that lie one on each side of the throat between the anterior and posterior pillars of the fauces.[accessedResource: BTO:0001387][accessDate: 04-11-2010]
James Malone
tonsil
BTO:0001387
The two organs situated in the throat on either side of the narrow passage from the mouth to the pharynx. They are composed of lymphoid tissues.
The two organs situated in the throat on either side of the narrow passage from the mouth to the pharynx. They are composed of lymphoid tissues.[accessedResource: NCIt:C12802][accessDate: 04-11-2010]
abscess
abscess NOS
Tomasz Adamusiak
abscess (disorder)[accessedResource: DOID:1161][accessDate: 04-11-2010]
abscess NOS[accessedResource: DOID:1161][accessDate: 04-11-2010]
abscess NOS (disorder)[accessedResource: DOID:1161][accessDate: 04-11-2010]
abscess morphology
abscess morphology[accessedResource: DOID:1161][accessDate: 04-11-2010]
abscess (disorder)
abscess NOS (disorder)
DOID:1161
HCC44
James Malone
A key artery located in the front of the neck that carries blood from the heart to the brain. Cholesterol plaques on the inner wall of the carotid artery can lead to stroke.
TAO:0000097
EV:0100379
Common carotid artery[accessedResource: FMAID:3939][accessDate: 04-11-2010]
ZFA:0000097
Trunk of common carotid tree[accessedResource: FMAID:3939][accessDate: 04-11-2010]
carotid artery
Artery originating at the junction of the first two aortic arches and supplying the anterior brain. Kimmel et al, 1995.
Artery originating at the junction of the first two aortic arches and supplying the anterior brain.
MA:0001925
Artery originating at the junction of the first two aortic arches and supplying the anterior brain. Kimmel et al, 1995.[accessedResource: TAO:0000097][accessDate: 04-11-2010]
XAO:0000345
FMAID:3939
Common carotid artery
Artery originating at the junction of the first two aortic arches and supplying the anterior brain.[accessedResource: ZFA:0000097][accessDate: 04-11-2010]
EHDAA:6373
A key artery located in the front of the neck that carries blood from the heart to the brain. Cholesterol plaques on the inner wall of the carotid artery can lead to stroke.[accessedResource: BTO:0000168][accessDate: 04-11-2010]
BTO:0000168
James Malone
internal carotid artery[accessedResource: TAO:0000097][accessDate: 04-11-2010]
Trunk of common carotid tree
internal carotid artery
EMAPA:18609
pancreatic mesenchyme
Tomasz Adamusiak
Jie Zheng
http://www.arabidopsis.org/servlets/TairObject?id=1005158622&type=germplasm
CS57598 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158622&type=germplasm
CS57598
James Malone
Irregular microscopic structures scattered throughout the pancreas and comprising its endocrine part (the endocrine pancreas). In humans, they are composed of at least four types of cells: the alpha cells, which secrete glucagon; the beta cells, which are the most abundant and secrete insulin; the delta cells, which secrete somatostatin; and the PP cells, which secrete pancreatic polypeptide. Degeneration of the beta cells, whose secretion (insulin) is important in carbohydrate metabolism, is the major cause of type I diabetes mellitus.
island of Langerhans[accessedResource: BTO:0000991][accessDate: 04-11-2010]
pancreatic islet[accessedResource: BTO:0000991][accessDate: 04-11-2010]
island of Langerhans
BTO:0000991
James Malone
island of pancreas
islet of Langerhans
island of pancreas[accessedResource: BTO:0000991][accessDate: 04-11-2010]
Irregular microscopic structures scattered throughout the pancreas and comprising its endocrine part (the endocrine pancreas). In humans, they are composed of at least four types of cells: the alpha cells, which secrete glucagon; the beta cells, which are the most abundant and secrete insulin; the delta cells, which secrete somatostatin; and the PP cells, which secrete pancreatic polypeptide. Degeneration of the beta cells, whose secretion (insulin) is important in carbohydrate metabolism, is the major cause of type I diabetes mellitus.[accessedResource: BTO:0000991][accessDate: 04-11-2010]
pancreatic islet
BTO:0001685
aortic smooth muscle cell
aortic smooth muscle
aortic smooth muscle[accessedResource: BTO:0001685][accessDate: 04-11-2010]
aortic smooth muscle cell[accessedResource: BTO:0001685][accessDate: 04-11-2010]
aorta smooth muscle
KG1
James Malone
Ele Holloway
STA ET2.1
STA-ET-2.1
James Malone
Ele Holloway
TERV-AntiSenseB56
James Malone
SH4
James Malone
Ele Holloway
1,1-Dimethyl-2-oxohydrazine
Dimethylnitrosamine
DMN
Dimethylnitrosoamine
N,N-Dimethylnitrosamine
CN(C)N=O
A nitrosamine that has formula C2H6N2O.
C2H6N2O
N-methyl-N-nitrosomethanamine
http://www.ebi.ac.uk/efo/EFO_0001579
InChIKey=UMFJAHHVKNCGLG-UHFFFAOYAI
InChI=1/C2H6N2O/c1-4(2)3-5/h1-2H3
N-nitrosodimethylamine
CHEBI:35807
Research conducted on members of families, examining the affects of genetics, the environment, or twin offspring.
Family Study[accessedResource: NCIt:C15407][accessDate: 04-11-2010]
James Malone
NCIt:C15407
family based study
Research conducted on members of families, examining the affects of genetics, the environment, or twin offspring.[accessedResource: NCIt:C15407][accessDate: 04-11-2010]
Tomasz Adamusiak
family study
R8
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158767&type=germplasm
CS57743 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158767&type=germplasm
CS57743
James Malone
IDOMAL:0000321
A developmental stage of the Plasmodium life cycle found within the erythrocyte, called such because of the shape observed.
A developmental stage of the Plasmodium life cycle found within the erythrocyte, called such because of the shape observed.[accessedResource: IDOMAL:0000321][accessDate: 04-11-2010]
ring stage trophozoite
Tomasz Adamusiak
Jie Zheng
true
Loss of imprinting occurs in some tumour cells
Epigenetic status describes the imprinting state of a sample. E.g. Loss of imprinting occurs in some tumour cells
epigenetic status
true
UO:0000061
http://www.ebi.ac.uk/efo/EFO_0001804
A unit of molarity is a derived concentration unit which is a standard measure of the number of moles of a given substance per liter of solution.
A derived concentration unit which is a standard measure of the number of moles of a given substance per liter of solution.
unit of molarity
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#female[accessedResource: MO_506][accessDate: 04-11-2010]
CARO:0000028
A biological sex quality inhering in an individual or a population that only produces gametes that can be fertilised by male gametes.
James Malone
female
Tomasz Adamusiak
A biological sex quality inhering in an individual or a population that only produces gametes that can be fertilised by male gametes.[accessedResource: PATO:0000383][accessDate: 04-11-2010]
PATO:0000383
MO_506
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#female
Synovial sarcoma, NOS[accessedResource: SNOMEDCT:63211008][accessDate: 04-11-2010]
SNOMEDCT:63211008
GeneRIF:16158422
James Malone
GeneRIF:14507652
Synovial Sarcomas
SNOMEDCT:302851001
GeneRIF:11733362
NCIt:C3400
DOID:5485
A malignant neoplasm arising from tenosynovial tissue of the joints and in synovial cells of tendons and bursae. The legs are the most common site, but the tumor can occur in the abdominal wall and other trunk muscles. There are two recognized types: the monophasic (characterized by sheaths of monotonous spindle cells) and the biphasic (characterized by slit-like spaces or clefts within the tumor, lined by cuboidal or tall columnar epithelial cells). These sarcomas occur most commonly in the second and fourth decades of life. (From Dorland, 27th ed; DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p1363)[accessedResource: MSH:D013584][accessDate: 04-11-2010]
Malignant synovioma
GeneRIF:12037676
GeneRIF:16029077
A malignant neoplasm characterized by the chromosomal translocation t(X;18)(p11;q11). It can occur at any age, but mainly affects young adults, more commonly males. Although any site can be affected, the vast majority of the cases arise in the deep soft tissues of extremities, especially around the knee. Microscopically, synovial sarcoma is classified as monophasic (with a spindle or epithelial cell component) or biphasic (with both spindle and epithelial cell components). Synovial sarcomas can recur or metastasize to the lungs, bones, and lymph nodes.
SS
[M]Synovial sarcoma NOS[accessedResource: SNOMEDCT:63211008][accessDate: 04-11-2010]
[M]Synovioma NOS[accessedResource: SNOMEDCT:63211008][accessDate: 04-11-2010]
Sarcomas, Synovial[accessedResource: MSH:D013584][accessDate: 04-11-2010]
Synovial sarcoma (morphologic abnormality)
[M]Synovioma NOS
[M]Synovial sarcoma NOS
Synovioma[accessedResource: SNOMEDCT:63211008][accessDate: 04-11-2010]
Synovioma, NOS
Synovial sarcoma (disorder)[accessedResource: SNOMEDCT:302851001][accessDate: 04-11-2010]
GeneRIF:11895494
Synovial sarcoma, NOS
A malignant neoplasm arising from tenosynovial tissue of the joints and in synovial cells of tendons and bursae. The legs are the most common site, but the tumor can occur in the abdominal wall and other trunk muscles. There are two recognized types: the monophasic (characterized by sheaths of monotonous spindle cells) and the biphasic (characterized by slit-like spaces or clefts within the tumor, lined by cuboidal or tall columnar epithelial cells). These sarcomas occur most commonly in the second and fourth decades of life. (From Dorland, 27th ed; DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p1363)
Synoviomas
A malignant neoplasm characterized by the chromosomal translocation t(X;18)(p11;q11). It can occur at any age, but mainly affects young adults, more commonly males. Although any site can be affected, the vast majority of the cases arise in the deep soft tissues of extremities, especially around the knee. Microscopically, synovial sarcoma is classified as monophasic (with a spindle or epithelial cell component) or biphasic (with both spindle and epithelial cell components). Synovial sarcomas can recur or metastasize to the lungs, bones, and lymph nodes.[accessedResource: NCIt:C3400][accessDate: 04-11-2010]
SS[accessedResource: NCIt:C3400][accessDate: 04-11-2010]
GeneRIF:14871970
GeneRIF:15467754
GeneRIF:15069540
GeneRIF:12874758
synovial sarcoma
MSH:D013584
Synoviomas[accessedResource: MSH:D013584][accessDate: 04-11-2010]
Synovial sarcoma (disorder)
GeneRIF:15735574
Synovial sarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:63211008][accessDate: 04-11-2010]
Malignant synovioma[accessedResource: SNOMEDCT:302851001][accessDate: 04-11-2010]
Synovioma, NOS[accessedResource: SNOMEDCT:63211008][accessDate: 04-11-2010]
GeneRIF:12696068
Synovioma
GM12760
James Malone
Acute Myeloid Leukemia with Maturation[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
M2 Acute Myelogenous Leukemia[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
M2 Acute Myeloid Leukemia
M2 Acute Myeloblastic Leukemia with Maturation[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
Acute Myelocytic Leukemia with Maturation[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
M2 Acute Myeloblastic Leukemia with Maturation
NCIt:C3250
acute myeloblastic leukemia with maturation
M2 Acute Granulocytic Leukemia
FAB M2
M2 Acute Myeloblastic Leukemia[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
M2 Acute Myeloid Leukemia with Maturation[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
FAB M2[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
M2 Acute Myelogenous Leukemia with Maturation[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
Tomasz Adamusiak
An acute myeloid leukemia (AML) characterized by blasts with evidence of maturation to more mature neutrophils. Patients often present with anemia, neutropenia, and thrombocytopenia. AML with the t(8;21) is usually AML with maturation. This type of AML frequently responds to aggressive therapy. (WHO, 2001)[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
Acute Myeloid Leukemia (AML-M2)
M2 Acute Myeloid Leukemia with Maturation
Acute Myelogenous Leukemia with Maturation[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
M2 Acute Myelocytic Leukemia with Maturation
Acute Myeloid Leukemia with Maturation
M2 Acute Granulocytic Leukemia[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
M2 Acute Myelocytic Leukemia with Maturation[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
Acute M2 Myeloid Leukemia[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
Acute Myelogenous Leukemia with Maturation
AML with Maturation[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
M2 Acute Myelogenous Leukemia
M2 Acute Myeloblastic Leukemia
Acute Myeloid Leukemia (AML-M2)[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
M2 Acute Myelogenous Leukemia with Maturation
Acute Myelocytic Leukemia with Maturation
AML with Maturation
An acute myeloid leukemia (AML) characterized by blasts with evidence of maturation to more mature neutrophils. Patients often present with anemia, neutropenia, and thrombocytopenia. AML with the t(8;21) is usually AML with maturation. This type of AML frequently responds to aggressive therapy. (WHO, 2001)
SEM
James Malone
Ele Holloway
James Malone
(2-(4-Hydroxyphenyl)-6-hydroxybenzo(b)thien-3-yl)(4-(2-(1-piperidinyl)ethoxy)phenyl)methanone
[6-hydroxy-2-(4-hydroxyphenyl)-1-benzothien-3-yl][4-(2-piperidin-1-ylethoxy)phenyl]methanone
C28H27NO4S
Oc1ccc(cc1)-c2sc3cc(O)ccc3c2C(=O)c4ccc(OCCN5CCCCC5)cc4
A benzothiophene that has formula C28H27NO4S.
raloxifenum
raloxifene
LY 139481
InChIKey=GZUITABIAKMVPG-UHFFFAOYAG
raloxifeno
http://www.ebi.ac.uk/efo/EFO_0001601
CHEBI:8772
InChI=1/C28H27NO4S/c30-21-8-4-20(5-9-21)28-26(24-13-10-22(31)18-25(24)34-28)27(32)19-6-11-23(12-7-19)33-17-16-29-14-2-1-3-15-29/h4-13,18,30-31H,1-3,14-17H2
Natural Language Generator 8th April 2010
A BT20 is a cell line.
A BT20 is all of the following: something that is bearer of a breast carcinoma, something that derives from a homo sapiens, and something that derives from an epithelial cell.
James Malone
BT20
Kidney Clear Cell Sarcoma[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
Pediatric Renal Clear Cell Sarcoma
A clear cell sarcoma and sarcoma of kidney that can spread from the kidney to other organs.
James Malone
[M] Clear cell sarcoma of kidney[accessedResource: SNOMEDCT:189813000][accessDate: 04-11-2010]
SNOMEDCT:24007003
[M] Clear cell sarcoma of kidney
Pediatric Kidney Clear Cell Sarcoma[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
renal Clear cell sarcoma
A clear cell sarcoma and sarcoma of kidney that can spread from the kidney to other organs.[accessedResource: DOID:4880][accessDate: 04-11-2010]
[M] Clear cell sarcoma of kidney (morphologic abnormality)
Kidney Clear Cell Sarcoma
renal Clear cell sarcoma[accessedResource: DOID:4880][accessDate: 04-11-2010]
Childhood Kidney Clear Cell Sarcoma[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
Pediatric Renal Clear Cell Sarcoma[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
Childhood Renal Clear Cell Sarcoma
A rare pediatric sarcoma affecting the kidney. It is characterized by the presence of epithelioid or spindle cells forming cords or nests, separated by fibrovascular septa. This type of sarcoma frequently metastasizes to the bones.[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
A rare pediatric sarcoma affecting the kidney. It is characterized by the presence of epithelioid or spindle cells forming cords or nests, separated by fibrovascular septa. This type of sarcoma frequently metastasizes to the bones.
Clear cell sarcoma of kidney (morphologic abnormality)[accessedResource: SNOMEDCT:24007003][accessDate: 04-11-2010]
Childhood Renal Clear Cell Sarcoma[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
clear cell sarcoma of the kidney
clear cell renal cell carcinoma
Childhood Clear Cell Sarcoma of the Kidney
NCIt:C4264
[M] Clear cell sarcoma of kidney (morphologic abnormality)[accessedResource: SNOMEDCT:189813000][accessDate: 04-11-2010]
Clear Cell Sarcoma of Kidney
Clear Cell Sarcoma of Kidney[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
CCSK
DOID:4880
Childhood Kidney Clear Cell Sarcoma
A clear cell sarcoma that can spread from the kidney to other organs.
Clear cell sarcoma of kidney (morphologic abnormality)
Pediatric Kidney Clear Cell Sarcoma
CCSK[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
Childhood Clear Cell Sarcoma of the Kidney[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
SNOMEDCT:189813000
NCI-H1618
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158743&type=germplasm
CS57719 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158743&type=germplasm
CS57719
James Malone
SUDHL6
James Malone
Ele Holloway
Y79
James Malone
Ele Holloway
Abdomen Skin
The skin or integument surrounding the abdomen.[accessedResource: NCIt:C52758][accessDate: 04-11-2010]
James Malone
Abdomen Skin[accessedResource: NCIt:C52758][accessDate: 04-11-2010]
NCIt:C52758
abdominal skin
The skin or integument surrounding the abdomen.
DOID:7320
ovarian serous cystadenofibroma
serous cystadenofibroma
James Malone
Ele Holloway
ovarian serous cystadenofibroma[accessedResource: DOID:7320][accessDate: 04-11-2010]
KATOIII
James Malone
Ele Holloway
http://en.wikipedia.org/wiki/European_American
European-American
Tomasz Adamusiak
James Malone
SUM190PT
DOID:3911
James Malone
GeneRIF:15608054
Hutchinson-Gilford Disease
A very rare genetic disorder caused by mutations in the LMNA gene. It is characterized by premature aging. Signs and symptoms include failure to thrive, limited growth, alopecia, wrinkled skin, small face, development of atherosclerosis, and heart disease. There is no cure for this condition. Individuals do not usually survive beyond their early twenties. Death usually occurs as a result of complications from atherosclerosis.[accessedResource: NCIt:C34951][accessDate: 04-11-2010]
Premature Senility Syndrome[accessedResource: NCIt:C34951][accessDate: 04-11-2010]
progeria syndrome
HGPS[accessedResource: DOID:3911][accessDate: 04-11-2010]
MSH:D011371
HGPS
progeria[accessedResource: DOID:3911][accessDate: 04-11-2010]
Progeria syndrome (disorder) [Ambiguous][accessedResource: DOID:3911][accessDate: 04-11-2010]
GeneRIF:12714972
An abnormal congenital condition, associated with defects in the LAMIN TYPE A gene, which is characterized by premature aging in children, where all the changes of cell senescence occur. It is manifested by premature greying; hair loss; hearing loss (DEAFNESS); cataracts (CATARACT); ARTHRITIS; OSTEOPOROSIS; DIABETES MELLITUS; atrophy of subcutaneous fat; skeletal hypoplasia; elevated urinary HYALURONIC ACID; and accelerated ATHEROSCLEROSIS. Many affected individuals develop malignant tumors, especially SARCOMA.[accessedResource: MSH:D011371][accessDate: 04-11-2010]
GeneRIF:12702809
A very rare genetic disorder caused by mutations in the LMNA gene. It is characterized by premature aging. Signs and symptoms include failure to thrive, limited growth, alopecia, wrinkled skin, small face, development of atherosclerosis, and heart disease. There is no cure for this condition. Individuals do not usually survive beyond their early twenties. Death usually occurs as a result of complications from atherosclerosis.
Progeria
Hutchinson-Gilford syndrome (disorder)
Hutchinson-Gilford syndrome[accessedResource: SNOMEDCT:238870004][accessDate: 04-11-2010]
Syndrome, Hutchinson-Gilford
Hutchinson-Gilford disease[accessedResource: DOID:3911][accessDate: 04-11-2010]
Hutchinson-Gilford Progeria syndrome[accessedResource: DOID:3911][accessDate: 04-11-2010]
Progeria (disorder)
An abnormal congenital condition, associated with defects in the LAMIN TYPE A gene, which is characterized by premature aging in children, where all the changes of cell senescence occur. It is manifested by premature greying; hair loss; hearing loss (DEAFNESS); cataracts (CATARACT); ARTHRITIS; OSTEOPOROSIS; DIABETES MELLITUS; atrophy of subcutaneous fat; skeletal hypoplasia; elevated urinary HYALURONIC ACID; and accelerated ATHEROSCLEROSIS. Many affected individuals develop malignant tumors, especially SARCOMA.
Progeria syndrome (disorder) [Ambiguous]
Progeria (disorder)[accessedResource: DOID:3911][accessDate: 04-11-2010]
GeneRIF:12768443
SNOMEDCT:238870004
Premature senility syndrome
Hutchinson-Gilford Progeria syndrome
NCIt:C34951
Hutchinson-Gilford syndrome (disorder)[accessedResource: DOID:3911][accessDate: 04-11-2010]
GeneRIF:15342704
GeneRIF:12735900
MSH:D018279
A usually aggressive, poorly differentiated invasive adenocarcinoma characterized by the presence of malignant glandular cells in which the nucleus is pressed to one side by the presence of intracytoplasmic mucus. It may arise from the stomach, small and large intestine, ampulla of Vater, appendix, gallbladder, pancreas, lung, bladder, breast, and prostate gland.[accessedResource: NCIt:C3774][accessDate: 04-11-2010]
signet ring cell carcinoma
NCIt:C3774
A poorly differentiated adenocarcinoma in which the nucleus is pressed to one side by a cytoplasmic droplet of mucus. It usually arises in the gastrointestinal system.[accessedResource: MSH:D018279][accessDate: 04-11-2010]
[M]Signet ring carcinoma NOS (morphologic abnormality)
Signet ring carcinoma NOS (morphologic abnormality)
Signet Ring cell adenocarcinoma
A poorly differentiated adenocarcinoma in which the nucleus is pressed to one side by a cytoplasmic droplet of mucus. It usually arises in the gastrointestinal system.
A usually aggressive, poorly differentiated invasive adenocarcinoma characterized by the presence of malignant glandular cells in which the nucleus is pressed to one side by the presence of intracytoplasmic mucus. It may arise from the stomach, small and large intestine, ampulla of Vater, appendix, gallbladder, pancreas, lung, bladder, breast, and prostate gland.
GeneRIF:11788899
James Malone
[M]Signet ring carcinoma NOS
DOID:3493
Signet ring carcinoma[accessedResource: SNOMEDCT:87737001][accessDate: 04-11-2010]
[M]Signet ring carcinoma NOS[accessedResource: SNOMEDCT:189702009][accessDate: 04-11-2010]
Signet ring carcinoma NOS (morphologic abnormality)[accessedResource: DOID:3493][accessDate: 04-11-2010]
Signet ring cell carcinoma (morphologic abnormality)[accessedResource: DOID:3493][accessDate: 04-11-2010]
Signet ring carcinoma
SNOMEDCT:87737001
SNOMEDCT:189702009
Signet ring cell adenocarcinoma[accessedResource: SNOMEDCT:87737001][accessDate: 04-11-2010]
[M]Signet ring carcinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189702009][accessDate: 04-11-2010]
Signet ring cell carcinoma (morphologic abnormality)
A microgram is a mass unit which is equal to 1 gram x 10^-6
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ug[accessedResource: MO_438][accessDate: 04-11-2010]
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001707
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ug
true
microgram
ug
James Malone
Jie Zheng
A mass unit which is equal to one millionth of a gram or 10^[-6] g.
MO_438
µg
autopod
MA:0002714
paw
paw[accessedResource: MAT:0000091][accessDate: 04-11-2010]
The generic name for hand, paw, foot etc
EV:0100452
The generic name for hand, paw, foot etc[accessedResource: MAT:0000091][accessDate: 04-11-2010]
hand[accessedResource: MAT:0000091][accessDate: 04-11-2010]
foot[accessedResource: MAT:0000091][accessDate: 04-11-2010]
Tomasz Adamusiak
MAT:0000091
SAEL:45
hand
James Malone
SAEL:41
foot
NIFSTD:nlx_anat_20090603
James Malone
Tomasz Adamusiak
The physical state or matrix used to provide nutrients to the organism (e.g., liquid, agar, soil).
probably a role
MO_545
Jie Zheng
media
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#media[accessedResource: MO_545][accessDate: 04-11-2010]
liquid, agar, soil
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#media
ZEA:0015180
GRO:0005300
A sending out of new growth or the growth sent out: as a stem or branch with its leaves and appendages especially when not yet mature.
MAT:0000009
GRO:0005300[accessedResource: BTO:0001243][accessDate: 04-11-2010]
James Malone
BTO:0001243
A sending out of new growth or the growth sent out: as a stem or branch with its leaves and appendages especially when not yet mature.[accessedResource: BTO:0001243][accessDate: 04-11-2010]
shoot
James Malone
Ele Holloway
DOHH2
NCIt:C34111
basal plate
James Malone
PC12
James Malone
NCI-H1703
James Malone
Ele Holloway
Pulmonary Emphysema[accessedResource: NCIt:C3348][accessDate: 04-11-2010]
Pulmonary Emphysema
A subcategory of chronic obstructive pulmonary disease (COPD). It occurs in people who smoke and suffer from chronic bronchitis. It is characterized by inflation of the alveoli, alveolar wall damage, and reduction in the number of alveoli, resulting in difficulty breathing.[accessedResource: NCIt:C3348][accessDate: 04-11-2010]
NCIt:C3348
emphysema
A subcategory of chronic obstructive pulmonary disease (COPD). It occurs in people who smoke and suffer from chronic bronchitis. It is characterized by inflation of the alveoli, alveolar wall damage, and reduction in the number of alveoli, resulting in difficulty breathing.
James Malone
1.8
James Malone
Synonymous with lymphoid neoplasm EFO_0001642 - use instead.
true
haematological neoplasm
DOID:253
OntologyMappingImporter following DOID:253
obsolete_hematological neoplasm
BTO:0000759
liver
MA:0000358
1: A large very vascular glandular organ of vertebrates that secretes bile and causes important changes in many of the substances contained in the blood (as by converting sugars into glycogen which it stores up until required and by forming urea).n2: Any of various large compound glands associated with the digestive tract of invertebrate animals and probably concerned with the secretion of digestive enzymes.[accessedResource: BTO:0000759][accessDate: 04-11-2010]
1: A large very vascular glandular organ of vertebrates that secretes bile and causes important changes in many of the substances contained in the blood (as by converting sugars into glycogen which it stores up until required and by forming urea).n2: Any of various large compound glands associated with the digestive tract of invertebrate animals and probably concerned with the secretion of digestive enzymes.
XAO:0000133
James Malone
MAT:0000097
EMAPA:16846
TAO:0000123
FMAID:7197
EHDAA:2197
ZFA:0000123
Lobular organ which has as its parts lobules connected to the biliary tree. Examples: There is only one liver.
EV:0100089
MFO:0003060
Illumina genome analyzer II
Helen Parkinson
Is an instrument is which supports massively parallel sequencing of nucleic acids
high throughput sequencer
GM12003
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158670&type=germplasm
CS57646 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158670&type=germplasm
CS57646
James Malone
intestinum jejunum
MA:0000340
James Malone
BTO:0000657
EV:0100074
MAT:0000045
FMAID:7207
SAEL:56
NCIt:C12388
jejunum
The section of the small intestine that comprises the first two fifths beyond the duodenum and that is larger, thicker-walled, and more vascular and has more circular folds than the ileum.[accessedResource: BTO:0000657][accessDate: 04-11-2010]
The portion of the small intestine that extends from the duodenum to the ileum.
intestinum jejunum[accessedResource: BTO:0000657][accessDate: 04-11-2010]
The portion of the small intestine that extends from the duodenum to the ileum.[accessedResource: NCIt:C12388][accessDate: 04-11-2010]
The section of the small intestine that comprises the first two fifths beyond the duodenum and that is larger, thicker-walled, and more vascular and has more circular folds than the ileum.
MO_825
http://www.ebi.ac.uk/efo/EFO_0001705
A mass unit which is equal to one thousandth of a kilogram or 10^[-3] kg.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#g
Tomasz Adamusiak
gram
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#g[accessedResource: MO_825][accessDate: 04-11-2010]
A gram is a mass unit which is equal to one-thousanth of a kilogram.
g
Jie Zheng
true
James Malone
claw[accessedResource: MAT:0000158][accessDate: 04-11-2010]
MA:0002703
nail
EMAPA:18734
EV:0100159
Nail plate
FMAID:54326
James Malone
claw
MAT:0000158
Nail plate[accessedResource: FMAID:54326][accessDate: 04-11-2010]
NCIt:C43395
Denotes the inhabitants of Korea, a person from there, or their descendants elsewhere.
Denotes the inhabitants of Korea, a person from there, or their descendants elsewhere.[accessedResource: NCIt:C43395][accessDate: 04-11-2010]
Korean
Tomasz Adamusiak
MP:0006278
protruding sac formed by dilation of the aorta
a protruding sac formed by the dilation of the wall of the aorta resulting from a weakening of the vessel wall
a protruding sac formed by the dilation of the wall of the aorta resulting from a weakening of the vessel wall[accessedResource: MP:0006278][accessDate: 04-11-2010]
aortic aneurysm
James Malone
A bacterial disease is a disease factor that is caused primarily by bacteria.
bacterial disease
James Malone
leg
James Malone
One of the two lower extremities in humans used for locomotion and support.
A limb of an animal used especially for supporting the body and for walking.
BTO:0000721
NCIt:C32974
One of the two lower extremities in humans used for locomotion and support.[accessedResource: NCIt:C32974][accessDate: 04-11-2010]
A limb of an animal used especially for supporting the body and for walking.[accessedResource: BTO:0000721][accessDate: 04-11-2010]
CL:0000115
An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal. In mammals, endothelial cell has vimentin filaments and is derived from the mesoderm.[accessedResource: CL:0000115][accessDate: 04-11-2010]
James Malone
An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal. In mammals, endothelial cell has vimentin filaments and is derived from the mesoderm.
Endotheliocyte
The main type of cell found in the inside lining of blood vessels, lymph vessels, and the heart.[accessedResource: BTO:0001176][accessDate: 04-11-2010]
BTO:0001176
endothelial cell
Endotheliocyte[accessedResource: CL:0000115][accessDate: 04-11-2010]
The main type of cell found in the inside lining of blood vessels, lymph vessels, and the heart.
WM793-P1N1
James Malone
Ele Holloway
FBbt:00000090
dorsal ridge
James Malone
BTO:0000231
Either of the two hollow convoluted lateral halves of the cerebrum.
Either of the two hollow convoluted lateral halves of the cerebrum.[accessedResource: BTO:0000231][accessDate: 04-11-2010]
cerebral hemisphere
James Malone
Ele Holloway
H2287
NCI-H2287
James Malone
ICD9:200.6
anaplastic large cell lymphoma
Tomasz Adamusiak
GeneRIF:12845688
Myelomatosis[accessedResource: SNOMEDCT:109989006][accessDate: 04-11-2010]
GeneRIF:12070027
Myeloma
GeneRIF:14976049
GeneRIF:12651942
GeneRIF:11792572
A myeloma that is located_in the plasma cells in bone marrow.
GeneRIF:11840273
GeneRIF:12393489
GeneRIF:11872084
Myelomatosis
Multiple myeloma, no ICD-O subtype (morphologic abnormality)
GeneRIF:11985783
GeneRIF:11902142
Multiple myeloma, no ICD-O subtype
Kahler's disease
Myeloma, NOS
A myeloma that is located_in the plasma cells in bone marrow.[accessedResource: DOID:9538][accessDate: 04-11-2010]
GeneRIF:15010462
GeneRIF:12743296
GeneRIF:12231535
GeneRIF:11877293
Myeloma[accessedResource: SNOMEDCT:109989006][accessDate: 04-11-2010]
GeneRIF:12200385
GeneRIF:15626731
GeneRIF:15199411
GeneRIF:12888915
GeneRIF:15788896
GeneRIF:15731173
GeneRIF:15203873
GeneRIF:16030194
GeneRIF:12665525
GeneRIF:12200397
GeneRIF:12239172
GeneRIF:11918087
GeneRIF:12161360
Multiple myeloma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:55921005][accessDate: 04-11-2010]
GeneRIF:12433678
GeneRIF:12970749
GeneRIF:15725479
GeneRIF:12430875
GeneRIF:12604407
GeneRIF:15061198
GeneRIF:15458509
GeneRIF:12569357
Multiple myeloma, morphology (morphologic abnormality)
GeneRIF:12649140
Multiple myeloma, morphology (morphologic abnormality)[accessedResource: SNOMEDCT:55921005][accessDate: 04-11-2010]
GeneRIF:15205949
GeneRIF:12791655
GeneRIF:12560229
GeneRIF:15735670
GeneRIF:12543106
GeneRIF:15475450
GeneRIF:15920166
NCIt:C3242
[M]Plasma cell myeloma
GeneRIF:15933061
GeneRIF:15940250
GeneRIF:15479729
ICD9:203.0
GeneRIF:11940485
GeneRIF:14656874
GeneRIF:12070032
GeneRIF:12002771
GeneRIF:14513045
GeneRIF:14514474
[M]Plasma cell myeloma[accessedResource: SNOMEDCT:55921005][accessDate: 04-11-2010]
GeneRIF:11568006
GeneRIF:15692064
A bone marrow-based plasma cell neoplasm characterized by a serum monoclonal protein and skeletal destruction with osteolytic lesions, pathological fractures, bone pain, hypercalcemia, and anemia. Clinical variants include non-secretory myeloma, smoldering myeloma, indolent myeloma, and plasma cell leukemia. (WHO, 2001)[accessedResource: NCIt:C3242][accessDate: 04-11-2010]
GeneRIF:16044163
GeneRIF:15070697
GeneRIF:11877256
GeneRIF:14755377
GeneRIF:15692072
GeneRIF:16026644
GeneRIF:12459170
GeneRIF:11830493
Multiple myeloma (clinical)
Multiple myeloma, no ICD-O subtype[accessedResource: SNOMEDCT:55921005][accessDate: 04-11-2010]
GeneRIF:15070700
GeneRIF:15215163
GeneRIF:15657357
GeneRIF:15731178
Plasmacytic myeloma[accessedResource: SNOMEDCT:109989006][accessDate: 04-11-2010]
Multiple myeloma (clinical)[accessedResource: SNOMEDCT:109989006][accessDate: 04-11-2010]
GeneRIF:15172968
GeneRIF:11896542
GeneRIF:12001122
GeneRIF:11877294
A bone marrow-based plasma cell neoplasm characterized by a serum monoclonal protein and skeletal destruction with osteolytic lesions, pathological fractures, bone pain, hypercalcemia, and anemia. Clinical variants include non-secretory myeloma, smoldering myeloma, indolent myeloma, and plasma cell leukemia. (WHO, 2001)
GeneRIF:12456503
GeneRIF:15753365
GeneRIF:15471949
GeneRIF:15041705
GeneRIF:16002735
GeneRIF:15534117
GeneRIF:15138161
GeneRIF:12393542
GeneRIF:14677065
GeneRIF:12969979
GeneRIF:12433679
GeneRIF:15677557
GeneRIF:12199782
GeneRIF:15902294
GeneRIF:15878977
Multiple myeloma without mention of remission[accessedResource: ICD9:203.00][accessDate: 04-11-2010]
MULT MYELM W/O REMISSION[accessedResource: ICD9:203.00][accessDate: 04-11-2010]
multiple myeloma
GeneRIF:12682635
GeneRIF:14513053
GeneRIF:15070695
Plasma Cell Myeloma[accessedResource: NCIt:C3242][accessDate: 04-11-2010]
GeneRIF:15000866
Plasma Cell Myeloma
GeneRIF:11830495
GeneRIF:12574959
GeneRIF:14592826
DOID:9538
GeneRIF:14512299
SNOMEDCT:55921005
GeneRIF:15899516
GeneRIF:15512823
GeneRIF:11877296
MULT MYELM W/O REMISSION
GeneRIF:12471202
GeneRIF:14692531
GeneRIF:11745168
GeneRIF:12931219
GeneRIF:15705883
GeneRIF:16091744
GeneRIF:14715624
James Malone
GeneRIF:15671442
GeneRIF:12626569
GeneRIF:11830480
GeneRIF:12855565
Multiple myeloma (disorder)
GeneRIF:12368157
GeneRIF:12707028
GeneRIF:15003892
GeneRIF:12576455
Kahler's disease[accessedResource: SNOMEDCT:109989006][accessDate: 04-11-2010]
Plasmacytic myeloma
SNOMEDCT:109989006
GeneRIF:12660820
Multiple myeloma (disorder)[accessedResource: SNOMEDCT:109989006][accessDate: 04-11-2010]
GeneRIF:14671622
Myeloma, NOS[accessedResource: SNOMEDCT:55921005][accessDate: 04-11-2010]
GeneRIF:12517814
GeneRIF:11839670
GeneRIF:15583754
Multiple myeloma without mention of remission
ICD9:203.00
GeneRIF:12351414
GeneRIF:12377412
musculus quadriceps femoris
The greater extensor muscle of the front of the thigh that is divided into four parts: rectus femoris, vastus intermedius, vastus lateralis, and vastus medialis.
Quadriceps Muscle of the Thigh[accessedResource: NCIt:C33441][accessDate: 04-11-2010]
James Malone
quadriceps muscle of thigh[accessedResource: BTO:0001149][accessDate: 04-11-2010]
quadriceps[accessedResource: BTO:0001149][accessDate: 04-11-2010]
musculus quadriceps femoris[accessedResource: BTO:0001149][accessDate: 04-11-2010]
Quadriceps Muscle of the Thigh
A group of four powerful muscles in the front of the thigh. Their actions involve the extension of the knee joint.[accessedResource: NCIt:C33441][accessDate: 04-11-2010]
quadricep muscle
A group of four powerful muscles in the front of the thigh. Their actions involve the extension of the knee joint.
quadriceps muscle of thigh
quadriceps
NCIt:C33441
The greater extensor muscle of the front of the thigh that is divided into four parts: rectus femoris, vastus intermedius, vastus lateralis, and vastus medialis.[accessedResource: BTO:0001149][accessDate: 04-11-2010]
BTO:0001149
ACHN
Ele Holloway
James Malone
BE2C
James Malone
Ele Holloway
In most female insects, the usual sperm storage organ; a posteroventral ectodermal caecum of abdominal segment VIII located just behind the common oviduct; attached to the anterodorsal end of the vagina if the latter is developed; usually single but sometimes up to four are present. In mosquitoes, one, two or three may be present, each consisting of a spermathecal capsule at the end of a spermathecal duct.[accessedResource: TGMA:0000560][accessDate: 04-11-2010]
spermathecum
spermatheca[accessedResource: TGMA:0000560][accessDate: 04-11-2010]
reptaculum seminis
TGMA:0000560
spermatheca
TADS:0000434
WBbt:0005319
FBbt:00004921
MAT:0000168
James Malone
In most female insects, the usual sperm storage organ; a posteroventral ectodermal caecum of abdominal segment VIII located just behind the common oviduct; attached to the anterodorsal end of the vagina if the latter is developed; usually single but sometimes up to four are present. In mosquitoes, one, two or three may be present, each consisting of a spermathecal capsule at the end of a spermathecal duct.
reptaculum seminis[accessedResource: TGMA:0000560][accessDate: 04-11-2010]
seminal receptacle
seminal receptacle[accessedResource: MAT:0000168][accessDate: 04-11-2010]
KU812
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0001830
CHEBI:27027
micronutrient
James Malone
An event that has caused the permanent cessation of all vital functions; the end of life. Can be applied to a whole organism or to a part of an organism.
event death
James Malone
ochratoxin A
N-(((3R)-5-chloro-8-hydroxy-3-methyl-1-oxo-7-isochromanyl)carbonyl)-3-phenyl-L-alanine
InChI=1/C20H18ClNO6/c1-10-7-12-14(21)9-13(17(23)16(12)20(27)28-10)18(24)22-15(19(25)26)8-11-5-3-2-4-6-11/h2-6,9-10,15,23H,7-8H2,1H3,(H,22,24)(H,25,26)/t10-,15+/m1/s1/f/h22,25H
James Malone
InChI=1/C20H18ClNO5/c1-11-7-14-15(20(26)27-11)9-13(10-16(14)21)18(23)22-17(19(24)25)8-12-5-3-2-4-6-12/h2-6,9-11,17H,7-8H2,1H3,(H,22,23)(H,24,25)/t11-,17+/m1/s1/f/h22,24H
C[C@@H]1Cc2c(Cl)cc(cc2C(=O)O1)C(=O)N[C@@H](Cc1ccccc1)C(O)=O
(-)-N-((5-chloro-8-hydroxy-3-methyl-1-oxo-7-isochromanyl)carbonyl)-3-phenylalanine
A phenylalanine derivative that has formula C20H18ClNO6.
(R)-N-((5-chloro-3,4-dihydro-8-hydroxy-3-methyl-1-oxo-1H-2-benzopyran-7-yl)carbonyl)phenylalanine
N-{[(3R)-5-chloro-8-hydroxy-3-methyl-1-oxo-3,4-dihydro-1H-2-benzopyran-7-yl]carbonyl}-L-phenylalanine
http://www.ebi.ac.uk/efo/EFO_0001584
InChIKey=RWQKHEORZBHNRI-RKENYTOSDR
C20H18ClNO6
C[C@@H]1Cc2c(Cl)cc(C(=O)N[C@@H](Cc3ccccc3)C(O)=O)c(O)c2C(=O)O1
InChIKey=SXHXNWAJMDYKPB-CEHVPASVDA
CHEBI:7719
James Malone
MDAMB453
1.8
James Malone
MAT:0000342
WBbt:0005760
true
obsolete_somatic nervous system
Duplicate use EFO_0000892
OntologyMappingImporter following MAT:0000342
MEG01
James Malone
Ele Holloway
CHP212
James Malone
Ele Holloway
NIFSTD:birnlex_2117
Experiment
Experiment[accessedResource: NIFSTD:birnlex_2117][accessDate: 04-11-2010]
experimental process
http://www.ebi.ac.uk/efo/EFO_0001847
cytostatic
antineoplastic
antineoplastic agents
antineoplastic drug
CHEBI:35610
James Malone
A substance that inhibits or prevents the proliferation of neoplasms.
Ara-C-sensitive parental cell line
SW872
James Malone
Ele Holloway
MO_227
change in temperature, change in watering regime
Environmental stress is a treatment where some aspect of the environment is perturbed in order to stress the organism or culture, e.g. change in temperature, change in watering regime
environmental stress
Tomasz Adamusiak
Jie Zheng
James Malone
http://www.ebi.ac.uk/efo/EFO_0001893
CHEBI:50683
folic acid reductase inhibitor
James Malone
ATCC number: CRL-2265
CEM-c1
James Malone
COLO-704
Ele Holloway
James Malone
COLO704
James Malone
intervertebral disc
Intervertebral disk[accessedResource: FMA:10446][accessDate: 04-11-2010]
FMA:10446
MA:0000110
Intervertebral disk
http://www.arabidopsis.org/servlets/TairObject?id=1005158878&type=germplasm
CS57854 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158878&type=germplasm
CS57854
James Malone
Colorectal Carcinoma
Carcinoma of the Colon[accessedResource: NCIt:C4910][accessDate: 04-11-2010]
Neoplasms, Colorectal
Colorectal Tumors
carcinoma of colon (disorder)
NEOPL COLORECTAL[accessedResource: MSH:D015179][accessDate: 04-11-2010]
Colorectal Carcinomas[accessedResource: MSH:D015179][accessDate: 04-11-2010]
Colorectal Neoplasm[accessedResource: MSH:D015179][accessDate: 04-11-2010]
Carcinomas, Colorectal
Neoplasms, Colorectal[accessedResource: MSH:D015179][accessDate: 04-11-2010]
Carcinoma of the Colon
Colorectal Carcinoma[accessedResource: MSH:D015179][accessDate: 04-11-2010]
NCIt:C4349
An adenocarcinoma arising from the colon. It is more frequently seen in populations with a Western type diet and in patients with a history of chronic inflammatory bowel disease. Signs and symptoms include intestinal bleeding, anemia, and change in bowel habits. According to the degree of cellular differentiation, colonic adenocarcinomas are divided into well differentiated, moderately, and poorly differentiated. Morphologic variants include the mucinous adenocarcinoma and signet-ring adenocarcinoma. Lymphatic or hematogenous spread can occur early in the process and lead to systemic disease.
colon adenocarcinoma
Colon Cancer[accessedResource: NCIt:C4910][accessDate: 04-11-2010]
Tumors, Colorectal[accessedResource: MSH:D015179][accessDate: 04-11-2010]
DOID:234
Colonic Carcinoma[accessedResource: NCIt:C4910][accessDate: 04-11-2010]
Colonic Carcinoma
Colorectal Cancer[accessedResource: MSH:D015179][accessDate: 04-11-2010]
carcinoma of colon
Colorectal Neoplasm
Cancer, Colorectal
DOID:9256
MSH:D015179
A malignant tumor usually arising from the epithelium lining the large intestinal mucosa. Colon carcinoma is one of the most common malignancies in both males and females, and is especially common in North America and Europe. Grossly, most colon carcinomas are polypoid or ulcerating lesions. Microscopically, adenocarcinoma is the most frequently seen morphologic subtype. Prognosis depends on the stage of the disease (depth of invasion, metastasis to regional/distal lymph nodes or other anatomic sites). -- 2004[accessedResource: NCIt:C4910][accessDate: 04-11-2010]
Colon Cancer
rectal carcinoma
adenocarcinoma of colon
Colonic Adenocarcinoma[accessedResource: NCIt:C4349][accessDate: 04-11-2010]
Tumor, Colorectal
colorectal adenocarcinoma
Cancers, Colorectal[accessedResource: MSH:D015179][accessDate: 04-11-2010]
Tumors or cancer of the COLON or the RECTUM or both. Risk factors for colorectal cancer include chronic ULCERATIVE COLITIS; FAMILIAL POLYPOSIS COLI; exposure to ASBESTOS; and irradiation of the CERVIX UTERI.[accessedResource: MSH:D015179][accessDate: 04-11-2010]
An adenocarcinoma arising from the colon. It is more frequently seen in populations with a Western type diet and in patients with a history of chronic inflammatory bowel disease. Signs and symptoms include intestinal bleeding, anemia, and change in bowel habits. According to the degree of cellular differentiation, colonic adenocarcinomas are divided into well differentiated, moderately, and poorly differentiated. Morphologic variants include the mucinous adenocarcinoma and signet-ring adenocarcinoma. Lymphatic or hematogenous spread can occur early in the process and lead to systemic disease.[accessedResource: NCIt:C4349][accessDate: 04-11-2010]
DOID:1520
A malignant tumor usually arising from the epithelium lining the large intestinal mucosa. Colon carcinoma is one of the most common malignancies in both males and females, and is especially common in North America and Europe. Grossly, most colon carcinomas are polypoid or ulcerating lesions. Microscopically, adenocarcinoma is the most frequently seen morphologic subtype. Prognosis depends on the stage of the disease (depth of invasion, metastasis to regional/distal lymph nodes or other anatomic sites). -- 2004
carcinoma of colon[accessedResource: DOID:1520][accessDate: 04-11-2010]
adenocarcinoma of the colon[accessedResource: DOID:234][accessDate: 04-11-2010]
colon carcinoma
Colon Adenocarcinoma[accessedResource: NCIt:C4349][accessDate: 04-11-2010]
adenocarcinoma of colon[accessedResource: DOID:234][accessDate: 04-11-2010]
Cancers, Colorectal
Colorectal Tumor[accessedResource: MSH:D015179][accessDate: 04-11-2010]
COLORECTAL NEOPL
Tumors or cancer of the COLON or the RECTUM or both. Risk factors for colorectal cancer include chronic ULCERATIVE COLITIS; FAMILIAL POLYPOSIS COLI; exposure to ASBESTOS; and irradiation of the CERVIX UTERI.
NCIt:C4910
carcinoma of colon (disorder)[accessedResource: DOID:1520][accessDate: 04-11-2010]
adenocarcinoma of the colon
Colonic adenocarcinoma
colon carcinoma[accessedResource: DOID:1520][accessDate: 04-11-2010]
Tomasz Adamusiak
genotyping by high throughput sequencing
http://www.arabidopsis.org/servlets/TairObject?id=1005158864&type=germplasm
CS57840 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158864&type=germplasm
CS57840
James Malone
SK-MEL-2
James Malone
Ele Holloway
AILD[accessedResource: NCIt:C7528][accessDate: 04-11-2010]
Angioimmunoblastic Lymphadenopathy
A mature T-cell non-Hodgkin lymphoma, characterized by systemic disease and a polymorphous infiltrate involving lymph nodes. It occurs in the middle aged and elderly, with an equal incidence in males and females. The clinical course is typically aggressive. (WHO, 2001)
Angioimmunoblastic Lymphadenopathy Type T-Cell Lymphoma
angioimmunoblastic T-cell lymphoma
Angioimmunoblastic Lymphadenopathy with Dysproteinemia
Angioimmunoblastic Lymphadenopathy[accessedResource: NCIt:C7528][accessDate: 04-11-2010]
AILD
Angioimmunoblastic Lymphadenopathy Type T-Cell Lymphoma[accessedResource: NCIt:C7528][accessDate: 04-11-2010]
AILT[accessedResource: NCIt:C7528][accessDate: 04-11-2010]
Angioimmunoblastic Lymphadenopathy with Dysproteinemia[accessedResource: NCIt:C7528][accessDate: 04-11-2010]
A mature T-cell non-Hodgkin lymphoma, characterized by systemic disease and a polymorphous infiltrate involving lymph nodes. It occurs in the middle aged and elderly, with an equal incidence in males and females. The clinical course is typically aggressive. (WHO, 2001)[accessedResource: NCIt:C7528][accessDate: 04-11-2010]
NCIt:C7528
James Malone
AILT
RGD:1581618
Okamoto-Aoki
James Malone
FMAID:67681
Pancreatic ductal epithelium
Epithelium of pancreatic duct
Epithelium of pancreatic duct[accessedResource: FMAID:67681][accessDate: 04-11-2010]
pancreatic duct epithelium
Tomasz Adamusiak
Jie Zheng
C. elegans
http://www.ebi.ac.uk/efo/EFO_0002636
Caenorhabditis elegans is a free-living, transparent nematode (roundworm), about 1 mm in length, which lives in temperate soil environments
Caenorhabditis elegans
James Malone
James Malone
Ele Holloway
CMLT1
http://en.wikipedia.org/wiki/Ovulation
cumulus-oocyte complex
Tomasz Adamusiak
FBbt:00000489
dorsal prothoracic pharyngeal muscle
James Malone
GM12750
James Malone
Tomasz Adamusiak
spinal muscular atrophy with respiratory distress
OMIMID:604320
spinal muscular atrophy with respiratory distress type 1
SMARD 1
CHEBI:153671
http://www.ebi.ac.uk/efo/EFO_0002728
endothelin-1
Tomasz Adamusiak
Ele Holloway
NCIt:C37364
BTBR
BTBR[accessedResource: NCIt:C37364][accessDate: 04-11-2010]
BTBR mouse
Tomasz Adamusiak
Jie Zheng
James Malone
CHEBI:35717
sedative drug
http://www.ebi.ac.uk/efo/EFO_0001854
sedatives and hypnotics
hypnotics
sedatives
A drug used to induce drowsiness or sleep or to reduce psychological excitement or anxiety.
http://www.arabidopsis.org/servlets/TairObject?id=1005158899&type=germplasm
CS57875 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158899&type=germplasm
CS57875
James Malone
SNOMEDCT:10091002
high output cardiac failure
High output heart failure (disorder)
High output heart failure (disorder)[accessedResource: SNOMEDCT:10091002][accessDate: 04-11-2010]
high output heart failure
Tomasz Adamusiak
NCIt:C8936
B-precursor acute lymphoblastic leukemia
James Malone
Precursor B-Lymphoblastic Lymphoma/Leukemia[accessedResource: NCIt:C8936][accessDate: 04-11-2010]
DOID:7061
B-ALL
B Lymphoblastic Leukemia/Lymphoma
Precursor B-Lymphoblastic Lymphoma/Leukemia
B Lymphoblastic Leukemia/Lymphoma[accessedResource: NCIt:C8936][accessDate: 04-11-2010]
B-cell acute lymphoblastic leukemia
A neoplasm of lymphoblasts committed to the B-cell lineage, typically composed of small to medium-sized blast cells. When the neoplasm involves predominantly the bone marrow and the peripheral blood, it is called precursor B lymphoblastic leukemia (B-cell acute lymphoblastic leukemia). When it involves nodal or extranodal sites, it is called B lymphoblastic lymphoma. (WHO, 2001) -- 2003[accessedResource: NCIt:C8936][accessDate: 04-11-2010]
A neoplasm of lymphoblasts committed to the B-cell lineage, typically composed of small to medium-sized blast cells. When the neoplasm involves predominantly the bone marrow and the peripheral blood, it is called precursor B lymphoblastic leukemia (B-cell acute lymphoblastic leukemia). When it involves nodal or extranodal sites, it is called B lymphoblastic lymphoma. (WHO, 2001) -- 2003
MAT:0000366
storage organ
James Malone
Toledo
James Malone
Ele Holloway
protein kinase C inhibitors
http://www.ebi.ac.uk/efo/EFO_0001859
CHEBI:37700
protein kinase C inhibitor
James Malone
Chromophobe carcinoma[accessedResource: SNOMEDCT:1443001][accessDate: 04-11-2010]
Renal cell carcinoma, chromophobe cell[accessedResource: SNOMEDCT:128667008][accessDate: 04-11-2010]
renal cell carcinoma, chromophobe cell
Renal cell carcinoma, chromophobe cell (morphologic abnormality)
chromophobe adenocarcinoma
Chromophobe Carcinoma of the Kidney[accessedResource: NCIt:C4146][accessDate: 04-11-2010]
Chromophobe Carcinoma of the Kidney
Chromophobe Cell Carcinoma of the Kidney[accessedResource: NCIt:C4146][accessDate: 04-11-2010]
Chromophobe carcinoma
Chromophobe Adenocarcinoma[accessedResource: NCIt:C4146][accessDate: 04-11-2010]
Chromophobe Cell Carcinoma of Kidney
Chromophobe Cell Carcinoma of Kidney[accessedResource: NCIt:C4146][accessDate: 04-11-2010]
Chromophobe Carcinoma of Kidney
Chromophobe Carcinoma of Kidney[accessedResource: NCIt:C4146][accessDate: 04-11-2010]
Chromophobe adenocarcinoma is a renal cell carcinoma described as the third most common type of renal cell carcinoma. The cancerous cells are similar with the clear cells, they appear pale when viewed under microscope, but there are larger and display different features than clear cells. This type of cancer rarely metastasizes, and the tumors can be successfully removed with surgery.[accessedResource: DOID:4471][accessDate: 04-11-2010]
SNOMEDCT:1443001
DOID:4471
A type of carcinoma that comprises a minority of renal cell carcinomas. It is characterized by loss of chromosomes 1 and Y. Based on the cytoplasmic characteristics of the neoplastic cells, this type of carcinoma is classified as classic (typical) or eosinophilic. It has a much better prognosis than other renal cell carcinomas.
Chromophobe carcinoma (morphologic abnormality)
James Malone
Renal cell carcinoma, chromophobe cell (morphologic abnormality)[accessedResource: SNOMEDCT:128667008][accessDate: 04-11-2010]
chromophobe renal cell carcinoma
Chromophobe carcinoma (morphologic abnormality)[accessedResource: DOID:4471][accessDate: 04-11-2010]
Renal Cell Carcinoma, Chromophobe Type[accessedResource: NCIt:C4146][accessDate: 04-11-2010]
Renal Cell Carcinoma, Chromophobe Type
SNOMEDCT:128667008
Chromophobe Cell Carcinoma of the Kidney
Chromophobe adenocarcinoma is a renal cell carcinoma described as the third most common type of renal cell carcinoma. The cancerous cells are similar with the clear cells, they appear pale when viewed under microscope, but there are larger and display different features than clear cells. This type of cancer rarely metastasizes, and the tumors can be successfully removed with surgery.
A type of carcinoma that comprises a minority of renal cell carcinomas. It is characterized by loss of chromosomes 1 and Y. Based on the cytoplasmic characteristics of the neoplastic cells, this type of carcinoma is classified as classic (typical) or eosinophilic. It has a much better prognosis than other renal cell carcinomas.[accessedResource: NCIt:C4146][accessDate: 04-11-2010]
NCIt:C4146
antepartum peripartum cardiomyopathy[accessedResource: DOID:9997][accessDate: 04-11-2010]
Postpartum cardiomyopathy (disorder)
peripartum cardiomyopathy
Postpartum cardiomyopathy
Puerperal cardiomyopathy[accessedResource: SNOMEDCT:62377009][accessDate: 04-11-2010]
Postpartum cardiomyopathy (disorder)[accessedResource: SNOMEDCT:62377009][accessDate: 04-11-2010]
postpartum peripartum cardiomyopathy
Tomasz Adamusiak
Postpartum cardiomyopathy[accessedResource: SNOMEDCT:62377009][accessDate: 04-11-2010]
SNOMEDCT:62377009
Puerperal cardiomyopathy
DOID:9997
postpartum peripartum cardiomyopathy[accessedResource: DOID:9997][accessDate: 04-11-2010]
antepartum peripartum cardiomyopathy
true
weight percent
NCIt:C22619
Segment of neural tree organ which is continuous with a set of olfactory nerves and an olfactory tract.
ZFA:0000402
An anterior projection of each cerebral hemisphere that is continuous anteriorly with the olfactory nerve;nA term applied to the olfactory apparatus on the lower surface of the frontal lobe of the brain. It consists of the olfactory bulb, tract, and trigone.
olfactory lobe
BTO:0001362
An anterior projection of each cerebral hemisphere that is continuous anteriorly with the olfactory nerve;nA term applied to the olfactory apparatus on the lower surface of the frontal lobe of the brain. It consists of the olfactory bulb, tract, and trigone.[accessedResource: BTO:0001362][accessDate: 04-11-2010]
EV:0100173
James Malone
Brain structure which is the paired anteriormost part of the telencephalon and are connected to the telencephalon by two tracts carrying secondary olfactory fibers. From Neuroanatomy of the Zebrafish Brain.[accessedResource: ZFA:0000402][accessDate: 04-11-2010]
CNS - Brain - Olfactory Bulb (MMHCC)
CNS - Brain - Olfactory Bulb (MMHCC)[accessedResource: NCIt:C22619][accessDate: 04-11-2010]
MAT:0000116
bulbus olfactorius
bulbus olfactorius[accessedResource: ZFA:0000402][accessDate: 04-11-2010]
Olfactory bulb[accessedResource: FMAID:77624][accessDate: 04-11-2010]
FMAID:77624
EHDAA:5480
olfactory bulb
EMAPA:17778
SAEL:75
Brain structure which is the paired anteriormost part of the telencephalon and are connected to the telencephalon by two tracts carrying secondary olfactory fibers. From Neuroanatomy of the Zebrafish Brain.
MSH:D005756
GeneRIF:12390304
Erosive gastropathy (disorder)
Gastritis unspecified[accessedResource: SNOMEDCT:196743006][accessDate: 04-11-2010]
acute hemorrhagic gastritis [dup] (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
Gastric catarrh
acute gastritis
chronic gastritis (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
Other specified gastritis NOS (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
Other specified gastritis, without mention of hemorrhage[accessedResource: DOID:4029][accessDate: 04-11-2010]
Gastritis (disorder)[accessedResource: SNOMEDCT:4556007][accessDate: 04-11-2010]
Other specified gastritis, with hemorrhage
Gastritides[accessedResource: MSH:D005756][accessDate: 04-11-2010]
GeneRIF:14669317
GeneRIF:12671895
GeneRIF:14536000
Erosive gastropathy (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
Gastritis
acute gastritis with hemorrhage
acute gastritis, without mention of hemorrhage[accessedResource: DOID:4029][accessDate: 04-11-2010]
GeneRIF:15287151
Other specified gastritis (disorder)
GeneRIF:16201065
Gastritis, NOS
Other specified gastritis, with hemorrhage[accessedResource: DOID:4029][accessDate: 04-11-2010]
GeneRIF:11908710
Inflammation of the stomach.[accessedResource: NCIt:C26780][accessDate: 04-11-2010]
GeneRIF:15383700
acute haemorrhagic gastritis
acute gastritis[accessedResource: DOID:4029][accessDate: 04-11-2010]
Gastritides
GeneRIF:12958020
acute gastritis (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
GeneRIF:16275761
NCIt:C26780
acute gastritis with hemorrhage[accessedResource: DOID:4029][accessDate: 04-11-2010]
DOID:4029
chronic Gastritis[accessedResource: DOID:4029][accessDate: 04-11-2010]
Gastritis [Ambiguous]
Gastritis (disorder)
chronic Gastritis
Gastritis unspecified (disorder)
Other specified gastritis[accessedResource: DOID:4029][accessDate: 04-11-2010]
GeneRIF:16302981
James Malone
Gastritis unspecified (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
GASTRITIS HEMORRHAGIC
GASTRITIS HEMORRHAGIC[accessedResource: DOID:4029][accessDate: 04-11-2010]
Gastritis unspecified
Idiopathic erosive/hemorrhagic gastritis (disorder)
GeneRIF:15351034
GeneRIF:15216464
GeneRIF:15720413
GeneRIF:12011009
Other specified gastritis
Other specified gastritis NOS (disorder)
Inflammation of the GASTRIC MUCOSA, a lesion observed in a number of unrelated disorders.[accessedResource: MSH:D005756][accessDate: 04-11-2010]
acute gastric mucosal erosion (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
Other specified gastritis, without mention of hemorrhage
chronic gastritis NOS (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
acute hemorrhagic gastritis (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
Gastritis [Ambiguous][accessedResource: DOID:4029][accessDate: 04-11-2010]
Gastritis, NOS[accessedResource: SNOMEDCT:4556007][accessDate: 04-11-2010]
Inflammation of the GASTRIC MUCOSA, a lesion observed in a number of unrelated disorders.
chronic gastritis (disorder)
acute gastritis without mention of hemorrhage
GeneRIF:12519893
active gastritis
SNOMEDCT:196743006
Erosive Gastritis
acute hemorrhagic gastritis (disorder)
Inflammation of the stomach.
chronic gastritis NOS (disorder)
Erosive Gastritis[accessedResource: DOID:4029][accessDate: 04-11-2010]
acute gastric mucosal erosion (disorder)
acute gastritis (disorder)
acute hemorrhagic gastritis [dup] (disorder)
Gastric catarrh[accessedResource: SNOMEDCT:4556007][accessDate: 04-11-2010]
Other specified gastritis (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
Idiopathic erosive/hemorrhagic gastritis (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
Gastritis[accessedResource: MSH:D005756][accessDate: 04-11-2010]
acute haemorrhagic gastritis[accessedResource: DOID:4029][accessDate: 04-11-2010]
GeneRIF:12488564
SNOMEDCT:4556007
CL:0000071
The endothelial cells that line the vasculature.[accessedResource: CL:0000071][accessDate: 04-11-2010]
umbilical vein endothelial cell
James Malone
The endothelial cells that line the vasculature.
Cuboidal endothelial cell of vascular tree
Cuboidal endothelial cell of vascular tree[accessedResource: CL:0000071][accessDate: 04-11-2010]
primary microvascular endothelial cell
primary blood vessel endothelial cell
blood vessel endothelial cell
bicuculline
C20H17NO6
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0002725
Tomasz Adamusiak
[H][C@]1(OC(=O)c2c3OCOc3ccc12)[C@@]1([H])N(C)CCc2cc3OCOc3cc12
CHEBI:3092
(6R)-6-[(5S)-6-methyl-5,6,7,8-tetrahydro[1,3]dioxolo[4,5-g]isoquinolin-5-yl]furo[3,4-e][1,3]benzodioxol-8(6H)-one
Bicucullin
InChI=1/C20H17NO6/c1-21-5-4-10-6-14-15(25-8-24-14)7-12(10)17(21)18-11-2-3-13-19(26-9-23-13)16(11)20(22)27-18/h2-3,6-7,17-18H,4-5,8-9H2,1H3/t17-,18+/m0/s1
Bicuculline is a light-sensitive competitive antagonist of GABAA receptors. It was originally identified in 1932 in plant alkaloid extracts and has been isolated from Dicentra cucullaria, Adlumia fungosa, Fumariaceae, and several Corydalis species.
d-Bicuculline
Bicculine
InChIKey=IYGYMKDQCDOMRE-ZWKOTPCHBP
Triiodothyronine
L-T3
liothyronine
L-3,5,3'-Triiodothyronine
C15H12I3NO4
CHEBI:18258
Tresitope
http://www.ebi.ac.uk/efo/EFO_0002395
4-(4-hydroxy-3-iodophenoxy)-3,5-diiodo-L-phenylalanine
3,5,3'TRIIODOTHYRONINE
liothyroninum
An iodothyronine that has formula C15H12I3NO4.
InChI=1/C15H12I3NO4/c16-9-6-8(1-2-13(9)20)23-14-10(17)3-7(4-11(14)18)5-12(19)15(21)22/h1-4,6,12,20H,5,19H2,(H,21,22)/t12-/m0/s1/f/h21H
T3
liotironina
Tertroxin
N[C@@H](Cc1cc(I)c(Oc2ccc(O)c(I)c2)c(I)c1)C(O)=O
James Malone
InChIKey=AUYYCJSJGJYCDS-YROMPDBNDH
Ele Holloway
O-(4-hydroxy-3-iodophenyl)-3,5-diiodo-L-tyrosine
An iodothyronine compound having iodo substituents at the 3-, 3'- and 5-positions. Although some is produced in the thyroid, most of the 3,3',5-triiodo-L-thyronine in the body is generated by mono-deiodination of L-thyroxine in the peripheral tissues. Its metabolic activity is about 3 to 5 times that of L-thyroxine. The sodium salt is used in the treatment of hypothyroidism.
3,3',5-triiodo-L-thyronine
An iodothyronine compound having iodo substituents at the 3-, 3'- and 5-positions.
SUM44PE
James Malone
HeLa
Natural Language Generator 8th April 2010
A HeLa is a cell line.
A HeLa is all of the following: something that is bearer of a cervical carcinoma, something that derives from
a Homo sapiens, something that derives from an epithelial cell, and something that derives from a cervix.
James Malone
An HIV infectious disease that is a characterized cytologically by a reduction in the numbers of CD4-bearing helper T cells to 20 percent or less of normal thereby rendering the subject highly vulnerable to life-threatening conditions (as Pneumocystis carinii pneumonia) and to some that become life threatening (as Kaposi's sarcoma) and that is caused by infection with HIV commonly transmitted in infected blood especially during illicit intravenous drug use and in bodily secretions (as semen) during sexual intercourse.
GeneRIF:12634405
GeneRIF:11744690
GeneRIF:12944981
GeneRIF:11950939
GeneRIF:14506268
Acquired immune deficiency syndrome, NOS[accessedResource: SNOMEDCT:62479008][accessDate: 04-11-2010]
acquired human immunodeficiency virus infection syndrome NOS (disorder)
IMMUNODEFIC SYNDROME ACQUIRED[accessedResource: MSH:D000163][accessDate: 04-11-2010]
ACQUIRED IMMUNE DEFIC SYNDROME[accessedResource: MSH:D000163][accessDate: 04-11-2010]
acquired immune deficiency syndrome[accessedResource: DOID:635][accessDate: 04-11-2010]
GeneRIF:15793370
Immunologic Deficiency Syndrome, Acquired
Immunodeficiency due to human immunodeficiency virus infection[accessedResource: SNOMEDCT:62479008][accessDate: 04-11-2010]
GeneRIF:15814716
Immunologic Deficiency Syndrome, Acquired[accessedResource: MSH:D000163][accessDate: 04-11-2010]
acquired human immunodeficiency virus infection syndrome NOS (disorder)[accessedResource: DOID:635][accessDate: 04-11-2010]
AIDS, NOS[accessedResource: SNOMEDCT:62479008][accessDate: 04-11-2010]
A syndrome resulting from the acquired deficiency of cellular immunity caused by the human immunodeficiency virus (HIV). It is characterized by the reduction of the Helper T-lymphocytes in the peripheral blood and the lymph nodes. Symptoms include generalized lymphadenopathy, fever, weight loss, and chronic diarrhea. Patients with AIDS are especially susceptible to opportunistic infections (usually pneumocystis carinii pneumonia, cytomegalovirus (CMV) infections, tuberculosis, candida infections, and cryptococcosis), and the development of malignant neoplasms (usually non-Hodgkin's lymphoma and Kaposi's sarcoma). The human immunodeficiency virus is transmitted through sexual contact, sharing of contaminated needles, or transfusion of contaminated blood.[accessedResource: NCIt:C2851][accessDate: 04-11-2010]
GeneRIF:12964118
SNOMEDCT:62479008
ACQUIRED IMMUNODEFICIENCY SYNDROME, AIDS
Acquired immune deficiency syndrome (AIDS)[accessedResource: SNOMEDCT:62479008][accessDate: 04-11-2010]
Syndrome, Acquired Immuno-Deficiency[accessedResource: MSH:D000163][accessDate: 04-11-2010]
NCIt:C2851
MSH:D000163
GeneRIF:16014568
Immuno-Deficiency Syndromes, Acquired[accessedResource: MSH:D000163][accessDate: 04-11-2010]
GeneRIF:15865925
Acquired immune deficiency syndrome (AIDS) (disorder)[accessedResource: SNOMEDCT:62479008][accessDate: 04-11-2010]
acquired immunedeficiency syndrome
GeneRIF:15327898
acquired Immune deficiency
Acquired Immuno-Deficiency Syndrome
AIDS
AIDS (disorder)
A syndrome resulting from the acquired deficiency of cellular immunity caused by the human immunodeficiency virus (HIV). It is characterized by the reduction of the Helper T-lymphocytes in the peripheral blood and the lymph nodes. Symptoms include generalized lymphadenopathy, fever, weight loss, and chronic diarrhea. Patients with AIDS are especially susceptible to opportunistic infections (usually pneumocystis carinii pneumonia, cytomegalovirus (CMV) infections, tuberculosis, candida infections, and cryptococcosis), and the development of malignant neoplasms (usually non-Hodgkin&apos;s lymphoma and Kaposi&apos;s sarcoma). The human immunodeficiency virus is transmitted through sexual contact, sharing of contaminated needles, or transfusion of contaminated blood.
A syndrome resulting from the acquired deficiency of cellular immunity caused by the human immunodeficiency virus (HIV). It is characterized by the reduction of the Helper T-lymphocytes in the peripheral blood and the lymph nodes. Symptoms include generalized lymphadenopathy, fever, weight loss, and chronic diarrhea. Patients with AIDS are especially susceptible to opportunistic infections (usually pneumocystis carinii pneumonia, cytomegalovirus (CMV) infections, tuberculosis, candida infections, and cryptococcosis), and the development of malignant neoplasms (usually non-Hodgkin's lymphoma and Kaposi's sarcoma). The human immunodeficiency virus is transmitted through sexual contact, sharing of contaminated needles, or transfusion of contaminated blood.
Acquired immune deficiency syndrome (AIDS)
GeneRIF:14555765
An acquired defect of cellular immunity associated with infection by the human immunodeficiency virus (HIV), a CD4-positive T-lymphocyte count under 200 cells/microliter or less than 14% of total lymphocytes, and increased susceptibility to opportunistic infections and malignant neoplasms. Clinical manifestations also include emaciation (wasting) and dementia. These elements reflect criteria for AIDS as defined by the CDC in 1993.
An acquired defect of cellular immunity associated with infection by the human immunodeficiency virus (HIV), a CD4-positive T-lymphocyte count under 200 cells/microliter or less than 14% of total lymphocytes, and increased susceptibility to opportunistic infections and malignant neoplasms. Clinical manifestations also include emaciation (wasting) and dementia. These elements reflect criteria for AIDS as defined by the CDC in 1993.[accessedResource: MSH:D000163][accessDate: 04-11-2010]
ACQUIRED IMMUNODEFICIENCY SYNDROME, AIDS[accessedResource: NCIt:C2851][accessDate: 04-11-2010]
GeneRIF:14699011
GeneRIF:15809899
An HIV infectious disease that is a characterized cytologically by a reduction in the numbers of CD4-bearing helper T cells to 20 percent or less of normal thereby rendering the subject highly vulnerable to life-threatening conditions (as Pneumocystis carinii pneumonia) and to some that become life threatening (as Kaposi's sarcoma) and that is caused by infection with HIV commonly transmitted in infected blood especially during illicit intravenous drug use and in bodily secretions (as semen) during sexual intercourse.[accessedResource: DOID:635][accessDate: 04-11-2010]
Immunodeficiency due to human immunodeficiency virus infection
ACQUIRED IMMUNODEFIC SYNDROME
Acquired immunodeficiency syndrome is a HIV infection consisting of a disease of the human immune system that is characterized cytologically especially by a reduction in the numbers of CD4-bearing helper T cells to 20 percent or less of normal thereby rendering the subject highly vulnerable to life-threatening conditions (as Pneumocystis carinii pneumonia) and to some that become life threatening (as Kaposi's sarcoma) and that is caused by infection with HIV commonly transmitted in infected blood especially during illicit intravenous drug use and in bodily secretions (as semen) during sexual intercourse.
acquired immune defic. syndr.[accessedResource: DOID:635][accessDate: 04-11-2010]
GeneRIF:15377788
GeneRIF:12468426
Acquired immunodeficiency syndrome, NOS[accessedResource: SNOMEDCT:62479008][accessDate: 04-11-2010]
GeneRIF:15042330
GeneRIF:12854077
Acquired immune defic. syndr.
IMMUNOL DEFIC SYNDROME ACQUIRED[accessedResource: MSH:D000163][accessDate: 04-11-2010]
Acquired immune deficiency syndrome (AIDS) (disorder)
Acquired Immune Deficiency[accessedResource: NCIt:C2851][accessDate: 04-11-2010]
AIDS (disorder)[accessedResource: SNOMEDCT:62479008][accessDate: 04-11-2010]
GeneRIF:14523088
GeneRIF:12749011
GeneRIF:12761559
Immunodeficiency Syndrome, Acquired
Immunodeficiency Syndromes, Acquired
Acquired immunodeficiency syndrome, NOS
GeneRIF:12750160
AIDS, NOS
Immuno-Deficiency Syndromes, Acquired
GeneRIF:12427286
GeneRIF:11121048
ACQUIRED IMMUNE DEFIC SYNDROME
A syndrome resulting from the acquired deficiency of cellular immunity caused by the human immunodeficiency virus (HIV). It is characterized by the reduction of the Helper T-lymphocytes in the peripheral blood and the lymph nodes. Symptoms include generalized lymphadenopathy, fever, weight loss, and chronic diarrhea. Patients with AIDS are especially susceptible to opportunistic infections (usually pneumocystis carinii pneumonia, cytomegalovirus (CMV) infections, tuberculosis, candida infections, and cryptococcosis), and the development of malignant neoplasms (usually non-Hodgkin's lymphoma and Kaposi's sarcoma). The human immunodeficiency virus is transmitted through sexual contact, sharing of contaminated needles, or transfusion of contaminated blood. -- 2004
Acquired human immunodeficiency virus infection syndrome NOS[accessedResource: SNOMEDCT:186715004][accessDate: 04-11-2010]
ACQUIRED IMMUNO DEFIC SYNDROME[accessedResource: MSH:D000163][accessDate: 04-11-2010]
GeneRIF:14557639
DOID:635
Acquired immune deficiency syndrome, NOS
IMMUNOL DEFIC SYNDROME ACQUIRED
acquired immune deficiency syndrome
GeneRIF:14990729
Acquired human immunodeficiency virus infection syndrome NOS
ACQUIRED IMMUNO DEFIC SYNDROME
SNOMEDCT:186715004
James Malone
GeneRIF:12501250
GeneRIF:12114533
Acquired Immunodeficiency Syndromes[accessedResource: MSH:D000163][accessDate: 04-11-2010]
GeneRIF:12372282
GeneRIF:12134147
Acquired Immunodeficiency Syndrome[accessedResource: MSH:D000163][accessDate: 04-11-2010]
GeneRIF:15637236
FBbt:00005664
embryonic central brain surface glia
James Malone
NCI-H747
James Malone
Ele Holloway
ZFS:0000038
larval day 6
James Malone
plant growth regulators
http://www.ebi.ac.uk/efo/EFO_0001900
CHEBI:26155
A chemical, natural or artificial, that can affect the rate of growth of a plant.
plant growth regulator
James Malone
NCIt:C0152309
FMA:61905
superior temporal gyrus
James Malone
http://jaxmice.jax.org/strain/001026.html
BALB is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/001026.html
BALB/cByJ
James Malone
NCIt:C49218
MA:0001724
cervix epithelium
James Malone
MO_562
cell line
true
A cell line is a cell factor which describes a population of cells cultured in vitro that are descended through one or more generations (and possible sub-cultures) from a single primary culture which was originally derived from part of an organism. The cells of such a population share common characteristics.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_line
Jie Zheng
Tomasz Adamusiak
James Malone
Atwood et al (2000) OED of Biochemistry and Molecular Biology, Oxford University Press.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_line[accessedResource: MO_562][accessDate: 04-11-2010]
pancreatic endoderm
Tomasz Adamusiak
Jie Zheng
A dicarboxylic acid amide that has formula C2H3NO3.
InChIKey=SOWBFZRMHSNYGE-YPUDGCQOCP
C2H3NO3
The monoamide of oxalic acid.
oxamic acid
NC(=O)C(O)=O
Oxamate
http://www.ebi.ac.uk/efo/EFO_0001588
amino(oxo)acetic acid
InChI=1/C2H3NO3/c3-1(4)2(5)6/h(H2,3,4)(H,5,6)/f/h5H,3H2
CHEBI:18058
Oxalic monoamide
dorsal metathoracic disc
haltere disc[accessedResource: FBbt:00001779][accessDate: 04-11-2010]
Dorsal imaginal disc of the metathorax. Precursor of structure of the adult dorsal metathorax including the haltere.
James Malone
FBbt:00001779
Dorsal imaginal disc of the metathorax. Precursor of structure of the adult dorsal metathorax including the haltere.[accessedResource: FBbt:00001779][accessDate: 04-11-2010]
haltere disc
COCM - Congestive cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
Primary dilated cardiomyopathy (disorder)
Cardiomyopathy, Dilated, CMD1A[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Primary dilated cardiomyopathy[accessedResource: SNOMEDCT:195021004][accessDate: 10-05-2010]
SNOMEDCT:399020009
Familial Idiopathic Cardiomyopathies
DCM - Dilated cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
Congestive cardiomyopathy (disorder)
Cardiomyopathy, Dilated
Cardiomyopathy, Dilated, LMNA[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Cardiomyopathies, Congestive[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Congestive Cardiomyopathies
Congestive dilated cardiomyopathy
A form of CARDIAC MUSCLE disease that is characterized by ventricular dilation, VENTRICULAR DYSFUNCTION, and HEART FAILURE. Risk factors include SMOKING; ALCOHOL DRINKING; HYPERTENSION; INFECTION; PREGNANCY; and mutations in the LMNA gene encoding LAMIN TYPE A, a NUCLEAR LAMINA protein.
Cardiomyopathy, Familial Idiopathic[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Cardiomyopathy, Congestive[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Cardiomyopathy, Dilated, with Conduction Deffect1
Dilated cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
Cardiomyopathy, Congestive
James Malone
Cardiomyopathies, Dilated
Congestive cardiomyopathy (disorder)[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
MSH:D002311
A form of CARDIAC MUSCLE disease that is characterized by ventricular dilation, VENTRICULAR DYSFUNCTION, and HEART FAILURE. Risk factors include SMOKING; ALCOHOL DRINKING; HYPERTENSION; INFECTION; PREGNANCY; and mutations in the LMNA gene encoding LAMIN TYPE A, a NUCLEAR LAMINA protein.[accessedResource: MSH:D002311][accessDate: 10-05-2010]
1.7
Cardiomyopathy, Dilated, with Conduction Deffect1[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Cardiomyopathy, Dilated, CMD1A
Familial Idiopathic Cardiomyopathy
Congestive dilated cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
COCM - Congestive cardiomyopathy
Cardiomyopathy, Dilated, LMNA
Primary dilated cardiomyopathy
DCM - Dilated cardiomyopathy
SNOMEDCT:195021004
Tomasz Adamusiak
Cardiomyopathies, Dilated[accessedResource: MSH:D002311][accessDate: 10-05-2010]
primary dilated cardiomyopathy (disorder)[accessedResource: DOID:12930][accessDate: 10-05-2010]
CCM - Congestive cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
Same as dilated cardiomyopathy EFO_0000407
DOID:12930
true
CCM - Congestive cardiomyopathy
obsolete_congestive cardiomyopathy
Idiopathic Cardiomyopathies, Familial[accessedResource: MSH:D002311][accessDate: 10-05-2010]
A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS).[accessedResource: ZFA:0000396][accessDate: 04-11-2010]
SAEL:71
EMAPA:16469
ZFA:0000396
XAO:0000177
nervous system
The nervous system is essentially a biological information highway, and is responsible for controlling all the biological processes and movement in the body, and can also receive information and interpret it via electrical signals which are used in this nervous system. It consists of the Central Nervous System (CNS), essentially the processing area and the Peripheral Nervous System which detects and sends electrical impulses that are used in the nervous system.[accessedResource: BTO:0001484][accessDate: 04-11-2010]
MAT:0000026
NIFSTD:birnlex_844
FMAID:7157
EHDAA:826
A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS).
AAO:0000324
WBbt:0005735
TAO:0000396
EV:0100162
James Malone
Tomasz Adamusiak
A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS). (Source: BioGlossary, www.Biology-Text.com)[accessedResource: TAO:0000396][accessDate: 04-11-2010]
FBbt:00005093
All the nerve centers and nerve fibers in the central, visceral and peripheral nervous systems.
All the nerve centers and nerve fibers in the central, visceral and peripheral nervous systems.[accessedResource: FBbt:00005093][accessDate: 04-11-2010]
The nervous system is essentially a biological information highway, and is responsible for controlling all the biological processes and movement in the body, and can also receive information and interpret it via electrical signals which are used in this nervous system. It consists of the Central Nervous System (CNS), essentially the processing area and the Peripheral Nervous System which detects and sends electrical impulses that are used in the nervous system.
BTO:0001484
MA:0000016
A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS). (Source: BioGlossary, www.Biology-Text.com)
A rounded thick modified underground stem base bearing membranous or scaly leaves and buds and acting as a vegetative reproductive structure.
GRO:0005787
corm
MAT:0000368
GRO:0005787[accessedResource: BTO:0000285][accessDate: 04-11-2010]
James Malone
A rounded thick modified underground stem base bearing membranous or scaly leaves and buds and acting as a vegetative reproductive structure.[accessedResource: BTO:0000285][accessDate: 04-11-2010]
BTO:0000285
synonym with material entity
true
obsolete_sample factor
Area 28 of Brodmann (Crosby)[accessedResource: FMA:72356][accessDate: 04-11-2010]
James Malone
Secondary olfactory cortex
entorhinal cortex
FMA:72356
Secondary olfactory cortical area (Carpenter)
Area 28 of Brodmann (Crosby)
Secondary olfactory cortex[accessedResource: FMA:72356][accessDate: 04-11-2010]
Entorhinal area[accessedResource: FMA:72356][accessDate: 04-11-2010]
Secondary olfactory cortical area (Carpenter)[accessedResource: FMA:72356][accessDate: 04-11-2010]
Entorhinal area
BCBL-1
James Malone
Ele Holloway
James Malone
Ele Holloway
A BM1604 is a cell line.
A BM1604 is all of the following: something that is bearer of a prostate carcinoma, something that derives from a homo sapiens, and something that derives from a prostate.
BM1604
Natural Language Generator 8th April 2010
NCIt:C43856
Denotes the inhabitants of Ireland, a person from there, or their descendants elsewhere.
Denotes the inhabitants of Ireland, a person from there, or their descendants elsewhere.[accessedResource: NCIt:C43856][accessDate: 04-11-2010]
Irish
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158835&type=germplasm
CS57811 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158835&type=germplasm
CS57811
James Malone
http://jaxmice.jax.org/strain/009283.html
ILSXISS92/TejJ
Tomasz Adamusiak
BTO:0000088
SAEL:16
EV:0100017
circulatory system[accessedResource: FBbt:00005057][accessDate: 04-11-2010]
FBbt:00005057
cardiovascular system
CV system[accessedResource: FMAID:7161][accessDate: 04-11-2010]
Organ system which consists of the heart, the systemic and pulmonary arterial and venous system, the lymphatic and the portal venous system.
The system of heart and blood vessels.[accessedResource: BTO:0000088][accessDate: 04-11-2010]
FMAID:7161
MAT:0000016
ZFA:0000010
MA:0000010
XAO:0000100
James Malone
TAO:0000010
MFO:000290
The system of heart and blood vessels.
EHDAA:394
TADS:0000146
EMAPA:16104
circulatory system
CV system
CHEBI:5931
http://www.ebi.ac.uk/efo/EFO_0001673
insulin
James Malone
GeneRIF:15476444
GeneRIF:16115812
Huntington's
GeneRIF:12706247
GeneRIF:15644269
GeneRIF:12008025
GeneRIF:12614934
Chorea, Chronic Progressive Hereditary (Huntington)
GeneRIF:16054230
NIFSTD:birnlex_12500
GeneRIF:12657678
GeneRIF:12691731
A familial disorder inherited as an autosomal dominant trait and characterized by the onset of progressive CHOREA and DEMENTIA in the fourth or fifth decade of life. Common initial manifestations include paranoia; poor impulse control; DEPRESSION; HALLUCINATIONS; and DELUSIONS. Eventually intellectual impairment; loss of fine motor control; ATHETOSIS; and diffuse chorea involving axial and limb musculature develops, leading to a vegetative state within 10-15 years of disease onset. The juvenile variant has a more fulminant course including SEIZURES; ATAXIA; dementia; and chorea.[accessedResource: NIFSTD:birnlex_12500][accessDate: 04-11-2010]
GeneRIF:14981075
HUNTINGTON DIS
GeneRIF:12890790
GeneRIF:14522959
Juvenile-Onset Huntington Disease
GeneRIF:12915485
GeneRIF:15359012
GeneRIF:15383276
HC - Huntington chorea
GeneRIF:11817536
HD - Huntington chorea[accessedResource: SNOMEDCT:58756001][accessDate: 04-11-2010]
Huntington's chorea (disorder)
Huntington's[accessedResource: NIFSTD:birnlex_12500][accessDate: 04-11-2010]
GeneRIF:15922606
Huntington's chorea (disorder)[accessedResource: DOID:12858][accessDate: 04-11-2010]
Chronic progressive hereditary chorea[accessedResource: SNOMEDCT:58756001][accessDate: 04-11-2010]
HUNTINGTON DIS JUVENILE
A familial disorder inherited as an autosomal dominant trait and characterized by the onset of progressive CHOREA and DEMENTIA in the fourth or fifth decade of life. Common initial manifestations include paranoia; poor impulse control; DEPRESSION; HALLUCINATIONS; and DELUSIONS. Eventually intellectual impairment; loss of fine motor control; ATHETOSIS; and diffuse chorea involving axial and limb musculature develops, leading to a vegetative state within 10-15 years of disease onset. The juvenile variant has a more fulminant course including SEIZURES; ATAXIA; dementia; and chorea. (From Adams et al., Principles of Neurology, 6th ed, pp1060-4)
GeneRIF:14985389
Juvenile Huntington Disease[accessedResource: MSH:D006816][accessDate: 04-11-2010]
GeneRIF:12952868
HD - Huntington chorea
GeneRIF:15934928
GeneRIF:15878807
GeneRIF:15715085
Huntington Disease, Juvenile Onset[accessedResource: MSH:D006816][accessDate: 04-11-2010]
GeneRIF:15057517
HUNTINGTON DIS[accessedResource: MSH:D006816][accessDate: 04-11-2010]
JUVENILE ONSET HUNTINGTON DIS[accessedResource: MSH:D006816][accessDate: 04-11-2010]
Akinetic Rigid Variant of Huntington Disease
GeneRIF:11432963
Chronic progressive hereditary chorea
Huntington's disease pathway
Huntington's disease
Tomasz Adamusiak
GeneRIF:11914418
GeneRIF:12078510
GeneRIF:12736330
GeneRIF:12969257
GeneRIF:11813242
Late Onset Huntington Disease[accessedResource: MSH:D006816][accessDate: 04-11-2010]
Chorea, Huntington[accessedResource: MSH:D006816][accessDate: 04-11-2010]
Juvenile Huntington Disease
Huntington's disease pathway[accessedResource: DOID:12858][accessDate: 04-11-2010]
Huntington disease
MSH:D006816
GeneRIF:15817265
HUNTINGTON DIS LATE ONSET[accessedResource: MSH:D006816][accessDate: 04-11-2010]
A familial disorder inherited as an autosomal dominant trait and characterized by the onset of progressive CHOREA and DEMENTIA in the fourth or fifth decade of life. Common initial manifestations include paranoia; poor impulse control; DEPRESSION; HALLUCINATIONS; and DELUSIONS. Eventually intellectual impairment; loss of fine motor control; ATHETOSIS; and diffuse chorea involving axial and limb musculature develops, leading to a vegetative state within 10-15 years of disease onset. The juvenile variant has a more fulminant course including SEIZURES; ATAXIA; dementia; and chorea.
SNOMEDCT:58756001
A familial disorder inherited as an autosomal dominant trait and characterized by the onset of progressive CHOREA and DEMENTIA in the fourth or fifth decade of life. Common initial manifestations include paranoia; poor impulse control; DEPRESSION; HALLUCINATIONS; and DELUSIONS. Eventually intellectual impairment; loss of fine motor control; ATHETOSIS; and diffuse chorea involving axial and limb musculature develops, leading to a vegetative state within 10-15 years of disease onset. The juvenile variant has a more fulminant course including SEIZURES; ATAXIA; dementia; and chorea. (From Adams et al., Principles of Neurology, 6th ed, pp1060-4)[accessedResource: MSH:D006816][accessDate: 04-11-2010]
GeneRIF:16184606
HD[accessedResource: DOID:12858][accessDate: 04-11-2010]
HUNTINGTONS DIS[accessedResource: MSH:D006816][accessDate: 04-11-2010]
Chorea, Huntington's
Chronic progressive chorea
HUNTINGTON'S CHOREA[accessedResource: ICD9:333.4][accessDate: 04-11-2010]
GeneRIF:15033177
GeneRIF:11593450
HC - Huntington chorea[accessedResource: SNOMEDCT:58756001][accessDate: 04-11-2010]
GeneRIF:15843398
GeneRIF:15880743
GeneRIF:12682342
GeneRIF:12960759
HUNTINGTON DIS JUVENILE ONSET
Akinetic Rigid Variant of Huntington Disease[accessedResource: MSH:D006816][accessDate: 04-11-2010]
HUNTINGTON DIS LATE ONSET
HD
Chorea, Huntington
GeneRIF:15167689
Huntington Disease, Akinetic Rigid Variant[accessedResource: MSH:D006816][accessDate: 04-11-2010]
ICD9:333.4
Huntington Disease[accessedResource: MSH:D006816][accessDate: 04-11-2010]
GeneRIF:15845076
GeneRIF:15496672
HUNTINGTON DIS JUVENILE[accessedResource: MSH:D006816][accessDate: 04-11-2010]
GeneRIF:14511117
GeneRIF:14725621
DOID:12858
GeneRIF:14751289
Huntington Disease, Akinetic-Rigid Variant
GeneRIF:15742215
GeneRIF:12604778
AKINETIC RIGID VARIANT HUNTINGTON DIS[accessedResource: MSH:D006816][accessDate: 04-11-2010]
GeneRIF:15009635
GeneRIF:12531510
GeneRIF:12950446
GeneRIF:12528814
GeneRIF:15029481
James Malone
GeneRIF:12781994
HUNTINGTONS DIS
GeneRIF:14978262
Chronic progressive chorea[accessedResource: SNOMEDCT:58756001][accessDate: 04-11-2010]
GeneRIF:15261377
GeneRIF:15749339
AKINETIC RIGID VARIANT HUNTINGTON DIS
Progressive Chorea, Hereditary, Chronic (Huntington)[accessedResource: MSH:D006816][accessDate: 04-11-2010]
GeneRIF:15337316
Huntington Disease, Late Onset
SNOMEDCT:404053004
alveolar rhabdomyosarcoma
James Malone
Alveolar rhabdomyosarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:63449009][accessDate: 04-11-2010]
GeneRIF:15140004
GeneRIF:11846302
Alveolar rhabdomyosarcoma (disorder)[accessedResource: DOID:4051][accessDate: 04-11-2010]
A form of RHABDOMYOSARCOMA occurring mainly in adolescents and young adults, affecting muscles of the extremities, trunk, orbital region, etc. It is extremely malignant, metastasizing widely at an early stage. Few cures have been achieved and the prognosis is poor. "Alveolar" refers to its microscopic appearance simulating the cells of the respiratory alveolus. (Holland et al., Cancer Medicine, 3d ed, p2188)[accessedResource: MSH:D018232][accessDate: 04-11-2010]
Alveolar rhabdomyosarcoma (morphologic abnormality)
GeneRIF:16157701
MSH:D018232
A rapidly growing malignant mesenchymal neoplasm. It is characterized by the presence of round cells with myoblastic differentiation and a fibrovascular stroma resembling an alveolar growth pattern. The tumor usually presents in the extremities.
A rapidly growing malignant mesenchymal neoplasm. It is characterized by the presence of round cells with myoblastic differentiation and a fibrovascular stroma resembling an alveolar growth pattern. The tumor usually presents in the extremities.[accessedResource: NCIt:C3749][accessDate: 04-11-2010]
Alveolar
Rhabdomyosarcomas, Alveolar[accessedResource: MSH:D018232][accessDate: 04-11-2010]
SNOMEDCT:63449009
Alveolar rhabdomyosarcoma (disorder)
DOID:4051
Rhabdomyosarcomas, Alveolar
NCIt:C3749
GeneRIF:12039929
A sarcoma that is composed of spindle cells with a rich vascular network.[accessedResource: DOID:2414][accessDate: 04-11-2010]
NCIt:C27263
A sarcoma that is composed of spindle cells with a rich vascular network.
Spindle Cell Neoplasm
hemangiopericytoma[accessedResource: DOID:2414][accessDate: 04-11-2010]
spindle cell tumor
James Malone
Spindle Cell Neoplasm[accessedResource: NCIt:C27263][accessDate: 04-11-2010]
hemangiopericytoma
DOID:2414
myeloid lineage restricted progenitor cell[accessedResource: CL:0000839][accessDate: 04-11-2010]
Tomasz Adamusiak
A progenitor cell restricted to the myeloid lineage.
CL:0000839
A progenitor cell restricted to the myeloid lineage.[accessedResource: CL:0000839][accessDate: 04-11-2010]
A progenitor cell of any myeloid lineage, potentially multipotent.
myeloid lineage restricted progenitor cell
myeloid progenitor cell
FBbt:00004511
TGMA:0000007
Paired, segmented, jointed, sensory appendage attached to the anterior of the head capsule, between the eyes.[accessedResource: FBbt:00004511][accessDate: 04-11-2010]
BTO:0000074
One of the paired anterior appendicular organs of the insect head.
feeler[accessedResource: TGMA:0000007][accessDate: 04-11-2010]
adult antenna
One of a pair of slender movable segmented sensory organs on the head of insects, myriapods, and crustaceans.
adult antenna[accessedResource: TGMA:0000007][accessDate: 04-11-2010]
antenna
One of a pair of slender movable segmented sensory organs on the head of insects, myriapods, and crustaceans.[accessedResource: BTO:0000074][accessDate: 04-11-2010]
Paired, segmented, jointed, sensory appendage attached to the anterior of the head capsule, between the eyes.
feeler
MAT:0000086
James Malone
One of the paired anterior appendicular organs of the insect head.[accessedResource: TGMA:0000007][accessDate: 04-11-2010]
ITM
James Malone
Ele Holloway
Amelanotic Melanoma of the Skin
Amelanotic Malignant Melanoma of Skin[accessedResource: NCIt:C4633][accessDate: 04-11-2010]
Amelanotic Malignant Melanoma (of Skin)
Amelanotic Malignant Melanoma of the Skin
Amelanotic Melanoma of Skin[accessedResource: NCIt:C4633][accessDate: 04-11-2010]
Amelanotic Malignant Skin Melanoma[accessedResource: NCIt:C4633][accessDate: 04-11-2010]
Amelanotic Melanoma of the Skin[accessedResource: NCIt:C4633][accessDate: 04-11-2010]
Amelanotic Malignant Skin Melanoma
Amelanotic Melanoma of Skin
Amelanotic Malignant Melanoma of the Skin[accessedResource: NCIt:C4633][accessDate: 04-11-2010]
NCIt:C4633
amelanotic skin melanoma
Whooping cough due to unspecified organism[accessedResource: DOID:1116][accessDate: 04-11-2010]
Pertussis (disorder)[accessedResource: DOID:1116][accessDate: 04-11-2010]
A respiratory system infectious disease that is caused by bacteria of the genus Bordetella characterized by a prolonged, high-pitched, deeply indrawn breath (whoop). The bacterium Bordetella pertussis causes a highly contagious form of whooping cough, and a milder disease is caused by Bordetella parapertussis.
GeneRIF:15845471
Whooping cough, unspecified organism[accessedResource: DOID:1116][accessDate: 04-11-2010]
Pertussis
GeneRIF:12464013
Pertussis (disorder)
WC - Whooping cough[accessedResource: SNOMEDCT:27836007][accessDate: 04-11-2010]
Pertusses
Whooping cough due to B. pertussis
Whooping cough, unspecified (disorder)[accessedResource: DOID:1116][accessDate: 04-11-2010]
SNOMEDCT:27836007
DOID:1116
Whooping cough, NOS[accessedResource: SNOMEDCT:27836007][accessDate: 04-11-2010]
GeneRIF:15341649
bordetella infection[accessedResource: DOID:1116][accessDate: 04-11-2010]
A respiratory infection caused by BORDETELLA PERTUSSIS and characterized by paroxysmal coughing ending in a prolonged crowing intake of breath.[accessedResource: MSH:D014917][accessDate: 04-11-2010]
WC - Whooping cough
A respiratory infection caused by BORDETELLA PERTUSSIS and characterized by paroxysmal coughing ending in a prolonged crowing intake of breath.
Whooping cough, unspecified (disorder)
Pertusses[accessedResource: MSH:D014917][accessDate: 04-11-2010]
Infection due to Bordetella pertussis
MSH:D014917
Whooping cough, NOS
whooping cough
ICD9:033.0
bordetella infection
GeneRIF:12220988
pertussis
A respiratory system infectious disease that is caused by bacteria of the genus Bordetella characterized by a prolonged, high-pitched, deeply indrawn breath (whoop). The bacterium Bordetella pertussis causes a highly contagious form of whooping cough, and a milder disease is caused by Bordetella parapertussis.[accessedResource: DOID:1116][accessDate: 04-11-2010]
Pertussis[accessedResource: MSH:D014917][accessDate: 04-11-2010]
Whooping cough due to bordetella pertussis [B. pertussis][accessedResource: ICD9:033.0][accessDate: 04-11-2010]
BORDETELLA PERTUSSIS[accessedResource: ICD9:033.0][accessDate: 04-11-2010]
(Whooping cough) or (Bordetella)
Whooping cough due to bordetella pertussis [B. pertussis]
GeneRIF:16239529
GeneRIF:15716435
GeneRIF:12946329
Infection due to Bordetella pertussis[accessedResource: SNOMEDCT:27836007][accessDate: 04-11-2010]
BORDETELLA PERTUSSIS
Whooping cough NOS (disorder)[accessedResource: DOID:1116][accessDate: 04-11-2010]
James Malone
Whooping cough, unspecified organism
Whooping cough NOS (disorder)
Whooping cough due to unspecified organism
(Whooping cough) or (Bordetella)[accessedResource: DOID:1116][accessDate: 04-11-2010]
GeneRIF:12152785
malignant peripheral nerve sheath tumor (morphologic abnormality)[accessedResource: DOID:5940][accessDate: 10-05-2010]
Neurogenic sarcoma [obs]
Malignant Peripheral Nerve Sheath Tumour
Nerve Sheath Neoplasms
Malignant Peripheral Nerve Sheath Tumor[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
Malignant Tumor of Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
malignant neoplasm of the peripheral nerve Sheath
Malignant Neurilemoma[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
MPNST - Malignant peripheral nerve sheath tumor[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
malignant peripheral nerve sheath tumor [dup] (morphologic abnormality)
MPNST with mesenchymal differentiation[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
MSH:D018317
Perineuriomas
Melanotic MPNST
Neurosarcoma
Malignant Schwannoma[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
Peripheral Nerve Sheath Tumors[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Malignant peripheral nerve sheath tumor (disorder)
MPNSTs
An uncommon, highly aggressive malignant tumor, arising from the peripheral nerves and affecting mostly adults in their third to sixth decades of life. It usually occurs in medium-sized and large nerves of the buttock, thigh, upper arm, or the paraspinal region. It may be associated with neurofibromatosis 1 (NF1).
MPNST - Malignant peripheral nerve sheath tumour
An uncommon, highly aggressive malignant tumor, arising from the peripheral nerves and affecting mostly adults in their third to sixth decades of life. It usually occurs in medium-sized and large nerves of the buttock, thigh, upper arm, or the paraspinal region. It may be associated with neurofibromatosis 1 (NF1).[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
SNOMEDCT:404037002
Malignant Neurilemmoma[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
MPNST with glandular differentiation
Nerve Sheath Tumors[accessedResource: MSH:D018317][accessDate: 10-05-2010]
true
Peripheral Nerve Sheath Tumors
malignant peripheral nerve sheath tumor (disorder)[accessedResource: DOID:5940][accessDate: 10-05-2010]
Neurogenic sarcoma[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
malignant peripheral nerve sheath tumor [dup] (morphologic abnormality)[accessedResource: DOID:5940][accessDate: 10-05-2010]
Epithelioid MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Malignant Tumor of the Peripheral Nerve Sheath
SNOMEDCT:19897006
Melanotic psammomatous MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Melanotic psammomatous MPNST
Perineurioma[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Neurofibrosarcoma [obs]
GeneRIF:12660952
Neurogenic sarcoma
MPNSTs[accessedResource: MSH:D018317][accessDate: 10-05-2010]
MPNST - Malignant peripheral nerve sheath tumor
Malignant Neoplasm of Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
GeneRIF:14519636
GeneRIF:12730955
Neurosarcoma [obs]
MPNST
DOID:5940
Malignant peripheral nerve sheath tumor (morphologic abnormality)
Malignant Neurilemoma
Neoplasms which arise from nerve sheaths formed by SCHWANN CELLS in the PERIPHERAL NERVOUS SYSTEM or by OLIGODENDROCYTES in the CENTRAL NERVOUS SYSTEM. Malignant peripheral nerve sheath tumors, NEUROFIBROMA, and NEURILEMMOMA are relatively common tumors in this category.
obsolete_malignant peripheral nerve sheath tumor class
Neurofibrosarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
GeneRIF:12917360
Neurofibrosarcoma[accessedResource: SNOMEDCT:404037002][accessDate: 10-05-2010]
Peripheral Nerve Sheath Tumors, Malignant[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Malignant Neurilemmoma
Neurosarcoma[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
MPNST with glandular differentiation[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
NCIt:C3798
Tumors of the Nerve Sheath
Peripheral Nerve Sheath Tumors, Malignant
Neurofibrosarcoma
malignant neoplasm of the peripheral nerve Sheath[accessedResource: DOID:5940][accessDate: 10-05-2010]
Tumors of the Nerve Sheath[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Nerve Sheath Neoplasm
MPNST[accessedResource: MSH:D018317][accessDate: 10-05-2010]
GeneRIF:11642720
Malignant peripheral nerve sheath tumour[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Neoplasms which arise from nerve sheaths formed by SCHWANN CELLS in the PERIPHERAL NERVOUS SYSTEM or by OLIGODENDROCYTES in the CENTRAL NERVOUS SYSTEM. Malignant peripheral nerve sheath tumors, NEUROFIBROMA, and NEURILEMMOMA are relatively common tumors in this category.[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Malignant Peripheral Nerve Sheath Tumor
Neurogenic sarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Malignant Tumor of the Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
Nerve Sheath Tumors
Malignant schwannoma
Malignant Peripheral Nerve Sheath Neoplasm[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
MPNST with mesenchymal differentiation
GeneRIF:12782393
Perineuriomas[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Nerve Sheath Neoplasm[accessedResource: MSH:D018317][accessDate: 10-05-2010]
GeneRIF:14991838
Malignant Tumor of Peripheral Nerve Sheath
Perineurioma
NEOPL NERVE SHEATH[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Nerve Sheath Neoplasms[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Malignant Peripheral Nerve Sheath Neoplasm
Malignant Neoplasm of Peripheral Nerve Sheath
Melanotic MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Neurosarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Epithelioid MPNST
MPNST - Malignant peripheral nerve sheath tumour[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
NEOPL NERVE SHEATH
Increased pressure within the pulmonary circulation due to lung or heart disorder.
James Malone
obsolete_pulmonary arterial hypertension
Increased pressure within the pulmonary circulation due to lung or heart disorder.[accessedResource: NCIt:C3120][accessDate: 10-05-2010]
duplicate of pulmonary hypertension EFO_0001361
true
1.8
Pulmonary Hypertension
NCIt:C3120
ArrayExpress production team
An assay in which the methylation state is determined and is compared between samples.
methylation profiling
James Malone
peripheral T-cell or NK-cell neoplasm
neoplasm of mature T-cells or NK-cells
Tomasz Adamusiak
James Malone
James Malone
COLO-829
Ele Holloway
COLO829
NCIt:C14138
aggressive
Tomasz Adamusiak
Jie Zheng
B Cells
CL:0000236
Bursa-Dependent Lymphocytes[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B Cells[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B-Lymphocytes[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
Bursa-Dependent Lymphocytes
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
Consolidated with B cell (EFO_0000101), use B cell class instead.
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.
B Lymphocytes
B-Cell
obsolete_B lymphocyte
true
Bursa-Equivalent Lymphocyte
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.[accessedResource: CL:0000236][accessDate: 10-05-2010]
Bursa-Equivalent Lymphocyte[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B lymphocyte[accessedResource: CL:0000236][accessDate: 10-05-2010]
B lymphocyte
B cell[accessedResource: CL:0000236][accessDate: 10-05-2010]
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.
NCIt:C12474
A GM19238 is a cell line.
A GM19238 is all of the following: something that has as quality a female, something that derives from a Homo sapiens, and something that derives from a b cell.
GM19238
Natural Language Generator 8th April 2010
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158715&type=germplasm
CS57691 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158715&type=germplasm
CS57691
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158644&type=germplasm
CS57620 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158644&type=germplasm
CS57620
James Malone
etanercept
ENBREL
FMAID:7394
1: The cartilaginous and membranous tube descending from the larynx and branching into the right and left main bronchi. It is kept patent by a series of about twenty transverse horseshoe-shaped cartilages. Called also windpipe. n2: One of a system of minute tubes ramifying throughout the body of a terrestrial arthropod and delivering air to the tissues. Called also tracheal tubule.[accessedResource: BTO:0001388][accessDate: 04-11-2010]
MAT:0000137
James Malone
MA:0000441
TADS:000315
SAEL:111
trachea
windpipe
XAO:0000118
EHDAA:3078
tracheal tubule[accessedResource: BTO:0001388][accessDate: 04-11-2010]
1: The cartilaginous and membranous tube descending from the larynx and branching into the right and left main bronchi. It is kept patent by a series of about twenty transverse horseshoe-shaped cartilages. Called also windpipe. n2: One of a system of minute tubes ramifying throughout the body of a terrestrial arthropod and delivering air to the tissues. Called also tracheal tubule.
Cuticle-lined epithelial tube that forms part of the tracheal system. The thinnest trachea consist of a single tracheocyte folded back on itself to form a tube.[accessedResource: FBbt:00005043][accessDate: 04-11-2010]
EMAPA:16853
FBbt:00005043
EV:0100040
BTO:0001388
Windpipe[accessedResource: FMAID:7394][accessDate: 04-11-2010]
Cuticle-lined epithelial tube that forms part of the tracheal system. The thinnest trachea consist of a single tracheocyte folded back on itself to form a tube.
tracheal tubule
second
A time unit which is equal to the duration of 9 192 631 770 periods of the radiation corresponding to the transition between the two hyperfine levels of the ground state of the caesium 133 atom.
true
s
UO:0000010
James Malone
A second is a time unit which is equal to the duration of 9 192 631 770 periods of the radiation corresponding to the transition between the two hyperfine levels of the ground state of the caesium 133 atom.
http://www.ebi.ac.uk/efo/EFO_0001687
Occipital cortex
occipital lobe
Occipital lobe is the one of five lobes of the cerebral hemisphere which occupies the posterior-most portion of the hemisphere. Anteriorly, it shares an arbitrary border with the parietal lobe and temporal lobe. Medially, it is bounded by the longitudinal cerebral fissure.
This lobe is located at the back of the head and is involved in vision and reading.
EV:0100170
BTO:0000293
This lobe is located at the back of the head and is involved in vision and reading.[accessedResource: BTO:0000293][accessDate: 04-11-2010]
James Malone
Occipital region
Occipital region[accessedResource: FMAID:67325][accessDate: 04-11-2010]
MAT:0000507
FMAID:67325
occipital cortex[accessedResource: BTO:0000293][accessDate: 04-11-2010]
BTO:0001235
NCIt:C13047
One of two or three twisted, curved tubules in each lobule of the testis in which spermatozoa develop.
James Malone
One of two or three twisted, curved tubules in each lobule of the testis in which spermatozoa develop.[accessedResource: BTO:0001235][accessDate: 04-11-2010]
Seminiferous Tubule[accessedResource: NCIt:C13047][accessDate: 04-11-2010]
seminiferous tubules
Seminiferous Tubule
MO_519
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#operator_variation_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#operator_variation_design[accessedResource: MO_519][accessDate: 04-11-2010]
operator variation design
Tomasz Adamusiak
A shoot component is a plant component which is specifically part of a plant shoot.
shoot component
R11
James Malone
Ele Holloway
cancer cell line
Natural Language Generator 8th April 2010
James Malone
A cancer cell line is defined as something that is bearer of a cancer.
A cancer cell line is a cell line.
http://www.arabidopsis.org/servlets/TairObject?id=1005158605&type=germplasm
CS57581 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158605&type=germplasm
CS57581
James Malone
https://www.cbil.upenn.edu/RADQuerier/php/displayStudy.php?study_id=2424
Tomasz Adamusiak
Jie Zheng
C57Bl/10 derived nonobese diabetic (NOD) mouse strain.
NOD.B10
BTO:0000052
stomatal complex
James Malone
MAT:0000346
PO:0002000
GRO:0005350
GRO:0005350[accessedResource: BTO:0000052][accessDate: 04-11-2010]
The epidermal complex consisting of two guard cells and the pore between them.
stoma
stoma[accessedResource: BTO:0000052][accessDate: 04-11-2010]
The epidermal complex consisting of two guard cells and the pore between them.[accessedResource: BTO:0000052][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0001861
CHEBI:37848
plant growth hormone
James Malone
MAT:0000493
ventral striatum
Ventral is a geometric modifier describing parts pertaining to the front or anterior of any structure, for example ventral striatum.
ventral
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158604&type=germplasm
CS57580 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158604&type=germplasm
CS57580
James Malone
A liposarcoma of any histologic subtype mixed with a non-lipomatous, high grade sarcomatous component. The non-lipomatous component may be present in the primary lesion or at the site of metastasis.[accessedResource: NCIt:C3704][accessDate: 04-11-2010]
DOID:5706
Dedifferentiated liposarcoma (disorder)[accessedResource: DOID:5706][accessDate: 04-11-2010]
Tomasz Adamusiak
dedifferentiated liposarcoma
Dedifferentiated liposarcoma (disorder)
NCIt:C3704
Dedifferentiated liposarcoma (morphologic abnormality)
Dedifferentiated liposarcoma (morphologic abnormality)[accessedResource: DOID:5706][accessDate: 04-11-2010]
A liposarcoma of any histologic subtype mixed with a non-lipomatous, high grade sarcomatous component. The non-lipomatous component may be present in the primary lesion or at the site of metastasis.
Sporadic amyotrophic lateral sclerosis is a amyotrophic lateral sclerosis in which there is no known cause, such as no family history.
sporadic amyotrophic lateral sclerosis
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158661&type=germplasm
CS57637 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158661&type=germplasm
CS57637
James Malone
Stanolone
[H][C@@]12CC[C@@]3([H])[C@]4([H])CC[C@H](O)[C@@]4(C)CC[C@]3([H])[C@@]1(C)CCC(=O)C2
CHEBI:16330
Androstanolone
Dihydrotestosteron
androstanolonum
James Malone
dihydrotestoterone
InChI=1/C19H30O2/c1-18-9-7-13(20)11-12(18)3-4-14-15-5-6-17(21)19(15,2)10-8-16(14)18/h12,14-17,21H,3-11H2,1-2H3/t12-,14-,15-,16-,17-,18-,19-/m0/s1
androstanolona
InChIKey=NVKAWKQGWWIWPM-ABEVXSGRBZ
An androgen that has formula C19H30O2.
5alpha-Dihydrotestosterone
http://www.ebi.ac.uk/efo/EFO_0002007
17beta-hydroxy-5alpha-androstan-3-one
C19H30O2
DIHYDROTESTOSTERONE
17beta-hydroxyandrostan-3-one
Sprague-Dawley rat[accessedResource: NIFSTD:birnlex_266][accessDate: 04-11-2010]
Tomasz Adamusiak
Sprague Dawley
RGD:70508
James Malone
Rats, Sprague Dawley[accessedResource: NIFSTD:birnlex_266][accessDate: 04-11-2010]
Sprague-Dawley rat
NIFSTD:birnlex_266
NIFSTD:birnlex_214
Rats, Sprague Dawley
1.8
true
obsolete_strain factor
James Malone
consolodated all strains into organism hierarchy
A Lbeta T2 is a cell line.
A Lbeta T2 is both something that derives from a mus musculus, and something that derives from a pituitary.
MCC:0000292
LbetaT2
Ele Holloway
James Malone
Natural Language Generator 8th April 2010
JAX:004460
BDC2.5/NOD is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/004460.html
A mouse strain developed by selection for diabetes (high fasting blood glucose) from F6 of the CTS strain
BDC2.5/NOD
Tomasz Adamusiak
Jie Zheng
James Malone
James Malone
EMAPA:17174
1: The conical sac of serous membrane that encloses the heart and the roots of the great blood vessels of vertebrates.n2: A cavity or space that contains the heart of an invertebrate and in arthropods is a part of the hemocoel.[accessedResource: BTO:0000717][accessDate: 04-11-2010]
BTO:0000717
pericardial sac[accessedResource: ZFA:0000054][accessDate: 04-11-2010]
pericardial sac
Organ cluster which has as its parts the fibrous pericardium and the pericardial sac.
ZFA:0000054
EV:0100023
FMAID:9869
EHDAA:5376
MAT:0000454
pericardium
1: The conical sac of serous membrane that encloses the heart and the roots of the great blood vessels of vertebrates.n2: A cavity or space that contains the heart of an invertebrate and in arthropods is a part of the hemocoel.
NCI-H1650
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0001448
Bacteria
James Malone
SW837
James Malone
Ele Holloway
AB140H is an Ara-C-resistant murine leukemia.
B140H
Natural Language Generator 8th April 2010
James Malone
Ele Holloway
true
NIFSTD:birnlex_2117
obsolete_experiment
Tomasz Adamusiak
rectal sac[accessedResource: MAT:0000050][accessDate: 04-11-2010]
adult rectum
The bladder-like rectum is bounded by a layer of circular muscle fibres and by sparser longitudinal fibres.[accessedResource: TGMA:0001028][accessDate: 04-11-2010]
XAO:0000238
MAT:0000050
SAEL:88
EMAPA:17896
James Malone
The bladder-like rectum is bounded by a layer of circular muscle fibres and by sparser longitudinal fibres.
TGMA:0001028
MA:0000336
FBbt:00005756
adult rectum[accessedResource: TGMA:0001028][accessDate: 04-11-2010]
BTO:0001158
EV:0100081
TADS:0000166
The terminal part of the intestine from the sigmoid flexure to the anus.[accessedResource: BTO:0001158][accessDate: 04-11-2010]
WBbt:0005773
The terminal part of the intestine from the sigmoid flexure to the anus.
rectum
intestinum rectum[accessedResource: BTO:0001158][accessDate: 04-11-2010]
rectal sac
EHDAA:EHDAA\:5836
intestinum rectum
FMAID:14544
The tubular part of the alimentary canal that extends from the stomach to the anus.[accessedResource: BTO:0000648][accessDate: 04-11-2010]
Bowel
adult alimentary canal[accessedResource: TGMA:0001819][accessDate: 04-11-2010]
MAT:0000043
The tubular part of the alimentary canal that extends from the stomach to the anus.
James Malone
intestines[accessedResource: MAT:0000043][accessDate: 04-11-2010]
FMAID:7199
EHDAA:518
intestines
WBbt:0005772
intestine
XAO:0000129
adult alimentary canal
MFO:0003040
BTO:0000648
bowel[accessedResource: BTO:0000648][accessDate: 04-11-2010]
MA:0000328
gut[accessedResource: MAT:0000043][accessDate: 04-11-2010]
gut
TGMA:0001819
TADS:0000165
The fluid-feeding habit of adult mosquitoes is reflected in the structure and ultrastructure of the alimentary canal.[accessedResource: TGMA:0001819][accessDate: 04-11-2010]
EV:0100071
TAO:0001338
ZFA:0001338
AAO:0000246
SAEL:55
The fluid-feeding habit of adult mosquitoes is reflected in the structure and ultrastructure of the alimentary canal.
An actinomycin that has formula C62H86N12O16.
CHEBI:27666
[H][C@@]12CCCN1C(=O)[C@H](NC(=O)[C@@H](NC(=O)c1ccc(C)c3oc4c(C)c(=O)c(N)c(C(=O)N[C@H]5[C@@H](C)OC(=O)[C@H](C(C)C)N(C)C(=O)CN(C)C(=O)[C@]6([H])CCCN6C(=O)[C@H](NC5=O)C(C)C)c4nc13)[C@@H](C)OC(=O)[C@H](C(C)C)N(C)C(=O)CN(C)C2=O)C(C)C
InChI=1/C62H86N12O16/c1-27(2)42-59(84)73-23-17-19-36(73)57(82)69(13)25-38(75)71(15)48(29(5)6)61(86)88-33(11)44(55(80)65-42)67-53(78)35-22-21-31(9)51-46(35)64-47-40(41(63)50(77)32(10)52(47)90-51)54(79)68-45-34(12)89-62(87)49(30(7)8)72(16)39(76)26-70(14)58(83)37-20-18-24-74(37)60(85)43(28(3)4)66-56(45)81/h21-22,27-30,33-34,36-37,42-45,48-49H,17-20,23-26,63H2,1-16H3,(H,65,80)(H,66,81)(H,67,78)(H,68,79)/t33-,34-,36+,37+,42-,43-,44+,45+,48+,49+/m1/s1/f/h65-68H
actinomycin IV
2-amino-4,6-dimethyl-3-oxo-1-N,9-N-bis-[(18aS)-10c,14,17-trimethyl-5,8,12,15,18-pentaoxo-6c,13t-di(propan-2-yl)-18ar-hexadecahydro-1H-pyrrolo[2,1-i][1,4,7,10,13]oxatetraazacyclohexadecin-9c-yl]-3H-phenoxazine-1,9-dicarboxamide
2-amino-N,N'-bis(hexadecahydro-2,5,9-trimethyl-6,13-bis(1-methylethyl)-1,4,7,11,14-pentaoxo-1H-pyrrolo(2,1-i)(1,4,7,10,13)oxatetra-azacyclohexadecin-10-yl)-4,6-dimethyl-3-oxo-3H-phenoxazine-1,9-dicarboxamide
C62H86N12O16
James Malone
http://www.ebi.ac.uk/efo/EFO_0001478
ActD
actinomycin D
InChIKey=RJURFGZVJUQBHK-HQANWYOLDQ
Dactinomycin
actinomycin C1
aggressive insulitis
James Malone
Ele Holloway
auxins
http://www.ebi.ac.uk/efo/EFO_0001818
CHEBI:22676
Any of a group of compounds, both naturally occurring and synthetic, that regulate aspects of plant growth (from Greek alphaupsilonxialphanuomega, "to grow").
auxin
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158610&type=germplasm
CS57586 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158610&type=germplasm
CS57586
James Malone
intestinal endoderm
Tomasz Adamusiak
Jie Zheng
Org 31710
antiprogestin
true
A unit of measurement is a standardized quantity of a physical quality.
NIFSTD:birnlex_2015
http://www.ebi.ac.uk/efo/EFO_0001446
Jie Zheng
James Malone
MO_3
unit
Tomasz Adamusiak
(1S)-2-{[(1E)-1-[(3R,4R,5S)-3-(acetyloxy)-4-hydroxy-1-azabicyclo[3.1.0]hex-2-ylidene]-2-{[(1Z)-1-(hydroxymethylidene)-2-oxopropyl]amino}-2-oxoethyl]amino}-1-[(2S)-2-methyloxiran-2-yl]-2-oxoethyl 3-methoxy-5-methylnaphthalene-1-carboxylate
James Malone
InChI=1/C31H33N3O11/c1-14-7-6-8-18-19(14)9-17(42-5)10-20(18)30(41)45-27(31(4)13-43-31)29(40)33-23(28(39)32-21(12-35)15(2)36)24-26(44-16(3)37)25(38)22-11-34(22)24/h6-10,12,22,25-27,35,38H,11,13H2,1-5H3,(H,32,39)(H,33,40)/b21-12-,24-23+/t22-,25+,26+,27+,31-,34-/m0/s1/f/h32-33H
A naphthalene that has formula C31H33N3O11.
C31H33N3O11
InChIKey=QIKVYJOCQXXRSJ-CKKAGOBJDQ
[H][C@@]12C[N@@H]1C(\\[C@@H](OC(C)=O)[C@@H]2O)=C(\\NC(=O)[C@@H](OC(=O)c3cc(OC)cc4c(C)cccc34)[C@]5(C)CO5)C(=O)N\\C(=C/O)C(C)=O
azinomycin B
Ele Holloway
CHEBI:50862
http://www.ebi.ac.uk/efo/EFO_0002005
http://www.ebi.ac.uk/efo/EFO_0002400
SAEL:112
Organism subdivision which is the part of the body posterior to the head and anterior to the tail.
MAT:0000296
1: The human or animal body apart from the head and appendages.n2: The thorax of an insect.[accessedResource: BTO:0001493][accessDate: 04-11-2010]
Torso[accessedResource: FMAID:7181][accessDate: 04-11-2010]
trunk
Tomasz Adamusiak
James Malone
Torso
NIFSTD:sao1078172392
FMAID:7181
1: The human or animal body apart from the head and appendages.n2: The thorax of an insect.
XAO:0003025
TAO:0001115
MFO:0001720
BTO:0001493
Organism subdivision which is the part of the body posterior to the head and anterior to the tail.[accessedResource: TAO:0001115][accessDate: 04-11-2010]
Subdivision of body proper, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with the ribcage, thoracic and lumbar vertebral column, sacrum and coccyx, it is partially surrounded by skin of trunk. Examples: There is only one trunk.
MAT:0000482
intestinal primordium
A primordium is a tissue modifier describing an organ or tissue in its earliest recognizable stage of development. For example, intestinal primordium.
primordium
James Malone
CCCC([O-])=O
n-butyrate
butanoic acid, ion(1-)
1-butyrate
C4H7O2
CH3-[CH2]2-COO(-)
propanecarboxylate
InChIKey=FERIUCNNQQJTOY-PAXZUDBGCU
butyrate
1-propanecarboxylate
The conjugate base of butyric acid.
propylformate
http://www.ebi.ac.uk/efo/EFO_0001496
butanoate
butanate
CHEBI:17968
1-butanoate
n-butanoate
A straight-chain saturated fatty acid anion that has formula C4H7O2.
ethylacetate
InChI=1/C4H8O2/c1-2-3-4(5)6/h2-3H2,1H3,(H,5,6)/p-1/fC4H7O2/q-1
A fatty acid anion that has formula C4H7O2.
http://www.arabidopsis.org/servlets/TairObject?id=1005158834&type=germplasm
CS57810 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158834&type=germplasm
CS57810
James Malone
spiracle
TGMA:0000578
Opening of the tracheal system on the surface of the body.[accessedResource: FBbt:00005054][accessDate: 04-11-2010]
The mostly slit-like opening on the body surface of the insects through which air is taken into the respiratory system.
FBbt:00005054
spiracular gland[accessedResource: MAT:0000208][accessDate: 04-11-2010]
In its simplest form, the aperture or opening into a trachea (primary tracheal orifice); in most insects, sunken below the surface of the integument (secondary orifice) thus comprising a chamber, the spiracular atrium, and the external opening into this chamber, the spiracular opening.[accessedResource: TGMA:0000578][accessDate: 04-11-2010]
spiracular gland
Opening of the tracheal system on the surface of the body.
TADS:0000524
spiraculum
In its simplest form, the aperture or opening into a trachea (primary tracheal orifice); in most insects, sunken below the surface of the integument (secondary orifice) thus comprising a chamber, the spiracular atrium, and the external opening into this chamber, the spiracular opening.
spiraculum[accessedResource: TGMA:0000578][accessDate: 04-11-2010]
MAT:0000208
James Malone
KYSE30
James Malone
Ele Holloway
A7
James Malone
Ele Holloway
nervous system developmental tissue
https://www.cbil.upenn.edu/RADQuerier/php/displayStudy.php?study_id=2424
C57Bl/6 derived nonobese diabetic (NOD) mouse strain.
NOD.B6
Tomasz Adamusiak
Jie Zheng
Ductal Carcinoma of the Breast[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
Ductal Carcinoma[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
Duct Adenocarcinoma
Ductal Adenocarcinoma
NCIt:C4017
Ductal Carcinoma of Breast[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
obsolete_ductal breast carcinoma
DOID:3008
Duct Adenocarcinoma[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
A carcinoma arising from the ducts. While ductal carcinomas can arise at other sites, this term is universally used to refer to carcinomas of the breast. Ductal carcinomas account for about two thirds of all breast cancers. Two types of ductal carcinomas have been described: Ductal carcinoma in situ (DCIS) and invasive ductal carcinoma, not otherwise specified. The latter often spreads to the axillary lymph nodes and other anatomic sites. The two forms of ductal carcinoma often coexist.
A carcinoma arising from the ducts. While ductal carcinomas can arise at other sites, this term is universally used to refer to carcinomas of the breast. Ductal carcinomas account for about two thirds of all breast cancers. Two types of ductal carcinomas have been described: Ductal carcinoma in situ (DCIS) and invasive ductal carcinoma, not otherwise specified. The latter often spreads to the axillary lymph nodes and other anatomic sites. The two forms of ductal carcinoma often coexist.[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
Ductal Breast Carcinoma
ductal carcinoma
ductal breast carcinoma[accessedResource: DOID:3008][accessDate: 10-05-2010]
Duct Carcinoma
Ductal Carcinoma of the Breast
Ductal Carcinoma of Breast
Duct Carcinoma[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
1.5
James Malone
Duplicate with invasive ductal carcinoma (EFO_0000186)
true
ductal adenocarcinoma[accessedResource: DOID:3008][accessDate: 10-05-2010]
Human pancreatic adenocarcinoma cell line, established from a 61 year old human female.[accessedResource: BTO:0001861][accessDate: 04-11-2010]
HTL96012
BTO:0001861
Human pancreatic adenocarcinoma cell line, established from a 61 year old human female.
BxPC3 cell
BxPC-3
BxPC-3 cell
BxPC3 cell[accessedResource: BTO:0001861][accessDate: 04-11-2010]
Ele Holloway
BxPC3
BxPC-3 cell[accessedResource: BTO:0001861][accessDate: 04-11-2010]
Bx-PC3 cell
James Malone
Bx-PC3 cell[accessedResource: BTO:0001861][accessDate: 04-11-2010]
Western gorilla
http://www.ebi.ac.uk/efo/EFO_0002641
Gorilla gorilla
James Malone
FMAID:24476
tibia
Tomasz Adamusiak
A precursor B cell is a B cell with the phenotype CD10-positive.
A precursor B cell is a B cell with the phenotype CD10-positive.[accessedResource: CL:0000817][accessDate: 04-11-2010]
CL:0000817
precursor B cell[accessedResource: CL:0000817][accessDate: 04-11-2010]
B-cell precursor
James Malone
pre-B cell
A precursor B cell is a B cell with the phenotype CD10-positive (P08473/NEP_HUMAN; PIRSF001194).
pre-BI cell
FBbt:00005662
embryonic central brain
James Malone
AU565
James Malone
WE-68
James Malone
Ele Holloway
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#dl[accessedResource: MO_624][accessDate: 04-11-2010]
A volume unit which is equal to one tenth of a liter or 10^[-1] L.
James Malone
Tomasz Adamusiak
MO_624
dl
http://www.ebi.ac.uk/efo/EFO_0001716
Jie Zheng
true
deciliter
A deciliter is a volume unit which is equal to one tenth of a liter or 10^-1 L.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#dl
Adrenal cortical adenoma (disorder)
Adrenal cortical adenoma (disorder)[accessedResource: DOID:4317][accessDate: 04-11-2010]
adrenocortical adenoma
Tomasz Adamusiak
Adrenal cortical adenoma, no ICD-O subtype (morphologic abnormality)
Adrenal cortical adenoma - morphology
Adrenal cortical adenoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:4317][accessDate: 04-11-2010]
Adrenal cortical adenoma NOS (morphologic abnormality)
Adrenal cortical adenoma - morphology[accessedResource: DOID:4317][accessDate: 04-11-2010]
adrenal cortical adenoma
Adrenal cortical adenoma NOS (morphologic abnormality)[accessedResource: DOID:4317][accessDate: 04-11-2010]
DOID:4317
adrenal cortical adenoma[accessedResource: DOID:4317][accessDate: 04-11-2010]
FBbt:00005665
embryonic central brain neuron
James Malone
NCI-H520
H520
James Malone
HSSultan
James Malone
Ele Holloway
esophageal endoderm
Tomasz Adamusiak
Jie Zheng
head tissue[accessedResource: MAT:0000017][accessDate: 04-11-2010]
craniofacial tissue
head tissue
Organism subdivision which is the part of the body which consists of the cranial and pharyngeal regions.
adult head
James Malone
Organism subdivision which is the part of the body which consists of the cranial and pharyngeal regions.[accessedResource: ZFA:0001114][accessDate: 04-11-2010]
MAT:0000017
MA:0000316
The larval cranium exclusive of the dorsal apotome.
epicranial plate[accessedResource: MAT:0000017][accessDate: 04-11-2010]
head
FBbt:00003007
TGMA:0000720
head[accessedResource: ZFA:0001114][accessDate: 04-11-2010]
epicranial plate
ZFA:0001114
adult head[accessedResource: FBbt:00003007][accessDate: 04-11-2010]
The larval cranium exclusive of the dorsal apotome.[accessedResource: TGMA:0000720][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0002700
A mass spectrometer is an instrument which is used to measure the mass to charge ratio of ions. All mass spectrometers consist of three basic parts: an ion source, a mass analyzer, and a detector system. The stages within the mass spectrometer are: 1. Production of ions from the sample 2. Separation of ions with different masses 3. Detection of the number of ions of each mass produced 4.Collection of data to generate the mass spectrum
mass spectrometer
Weak heart[accessedResource: DOID:6000][accessDate: 04-11-2010]
Heart failure NOS
Heart: [weak] or [failure NOS]
DOID:6000
Weak heart
Heart failure, unspecified
Tomasz Adamusiak
Heart failure, unspecified[accessedResource: DOID:6000][accessDate: 04-11-2010]
heart failure
Heart failure (disorder)[accessedResource: DOID:6000][accessDate: 04-11-2010]
Heart failure NOS[accessedResource: DOID:6000][accessDate: 04-11-2010]
Heart failure (disorder)
Heart: [weak] or [failure NOS][accessedResource: DOID:6000][accessDate: 04-11-2010]
Heart failure NOS (disorder)[accessedResource: DOID:6000][accessDate: 04-11-2010]
Heart failure NOS (disorder)
HB-S DIS W/O CRISIS NEC
GeneRIF:12850481
ICD9:282.69
A blood disorder characterized by the appearance of sickle-shaped red blood cells and anemia.[accessedResource: NCIt:C34383][accessDate: 04-11-2010]
SNOMEDCT:127040003
GeneRIF:15834635
Haemoglobin S disease
GeneRIF:14579408
Haemoglobin S-S disease
Hb S disease[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
GeneRIF:15153712
Other sickle-cell disease with crisis[accessedResource: ICD9:282.69][accessDate: 04-11-2010]
Sickle cell anemia of unspecified type (disorder)
Hemoglobin S disease
Sickle cell anemia of unspecified type[accessedResource: SNOMEDCT:191195005][accessDate: 04-11-2010]
Hemoglobin SS disease without crisis (disorder)[accessedResource: DOID:10923][accessDate: 04-11-2010]
DOID:10923
ICD9:282.6
GeneRIF:15297857
GeneRIF:11869935
Hemoglobin SS disease without crisis (disorder)
Hemoglobin S-S disease
GeneRIF:15388579
Sickle cell anaemia NOS
Drepanocythemia
HB-SS DIS NEC W CRISIS
HB-S DIS W/O CRISIS NEC[accessedResource: ICD9:282.68][accessDate: 04-11-2010]
Other sickle-cell disease without crisis
Hereditary hemoglobinopathy disorder homozygous for hemoglobin S[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
Sickle cell anemia[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
GeneRIF:15609334
GeneRIF:12677174
Hemoglobin S disease without crisis (disorder)
Other sickle-cell disease with crisis
ICD9:282.68
Hemoglobin S-S disease[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
Hb S disease
GeneRIF:15556687
Hb-SS disease without crisis[accessedResource: DOID:10923][accessDate: 04-11-2010]
Haemoglobin S-S disease[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
SNOMEDCT:191195005
Sickle cell anemia NOS (disorder)
SNOMEDCT:191199004
GeneRIF:15023184
Hereditary hemoglobinopathy disorder homozygous for hemoglobin S (disorder)[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
GeneRIF:14967817
GeneRIF:12773623
Sickle cell anemia of unspecified type (disorder)[accessedResource: SNOMEDCT:191195005][accessDate: 04-11-2010]
Sickle cell anemia NOS
GeneRIF:12714517
GeneRIF:15271798
GeneRIF:12549821
GeneRIF:12673836
Hb SS disease[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
Sickle-cell disease, unspecified
GeneRIF:12928439
Sickle cell anaemia[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
Sickle cell anemia of unspecified type
Hereditary hemoglobinopathy disorder homozygous for hemoglobin S (disorder)
Hereditary hemoglobinopathy disorder homozygous for hemoglobin S
Hb-SS disease without crisis
SICKLE CELL DISEASE NOS
sickle cell disease
GeneRIF:14683458
Sickle cell anemia NOS[accessedResource: SNOMEDCT:191199004][accessDate: 04-11-2010]
GeneRIF:12601490
NCIt:C34383
GeneRIF:15586174
Haemoglobin S disease[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
Sickle cell anemia
GeneRIF:15855323
ICD9:282.60
HB-SS DIS NEC W CRISIS[accessedResource: ICD9:282.69][accessDate: 04-11-2010]
Sickle-cell disease, unspecified[accessedResource: ICD9:282.60][accessDate: 04-11-2010]
Sickle cell anaemia of unspecified type[accessedResource: SNOMEDCT:191195005][accessDate: 04-11-2010]
Sickle cell anaemia NOS[accessedResource: SNOMEDCT:191199004][accessDate: 04-11-2010]
Hemoglobin S disease without crisis (disorder)[accessedResource: DOID:10923][accessDate: 04-11-2010]
Sickle cell syndrome[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
Sickle cell anemia NOS (disorder)[accessedResource: SNOMEDCT:191199004][accessDate: 04-11-2010]
Drepanocythaemia
Sickle cell syndrome
Hb SS disease
SICKLE CELL DISEASE NOS[accessedResource: ICD9:282.60][accessDate: 04-11-2010]
Drepanocythemia[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
James Malone
Drepanocythaemia[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
GeneRIF:15662557
A blood disorder characterized by the appearance of sickle-shaped red blood cells and anemia.
GeneRIF:14755370
Sickle cell anaemia of unspecified type
Other sickle-cell disease without crisis[accessedResource: ICD9:282.68][accessDate: 04-11-2010]
Sickle cell anaemia
Hemoglobin S disease[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
GeneRIF:15556291
IPC[accessedResource: CL:0000784][accessDate: 04-11-2010]
pDC[accessedResource: CL:0000784][accessDate: 04-11-2010]
CL:0000784
lymphoid dendritic cell[accessedResource: CL:0000784][accessDate: 04-11-2010]
T-associated plasma cell[accessedResource: CL:0000784][accessDate: 04-11-2010]
plasmacytoid dendritic cell
DC2[accessedResource: CL:0000784][accessDate: 04-11-2010]
plasmacytoid monocyte[accessedResource: CL:0000784][accessDate: 04-11-2010]
DC2
plasmacytoid T cell[accessedResource: CL:0000784][accessDate: 04-11-2010]
A dendritic cell type of distinct morphology, localization, and surface marker expression from other dendritic cell types and associated with early stage immune responses, particularly the release of physiologically abundant amounts of type I interferons in response to infection.
James Malone
lymphoid dendritic cell
T-associated plasma cell
IPC
plasmacytoid T cell
pDC
plasmacytoid monocyte
interferon-producing cell
interferon-producing cell[accessedResource: CL:0000784][accessDate: 04-11-2010]
A dendritic cell type of distinct morphology, localization, and surface marker expression from other dendritic cell types and associated with early stage immune responses, particularly the release of physiologically abundant amounts of type I interferons in response to infection.[accessedResource: CL:0000784][accessDate: 04-11-2010]
MO_347
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#in_vitro_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#in_vitro_design[accessedResource: MO_347][accessDate: 04-11-2010]
in vitro design
Tomasz Adamusiak
[X]Chronic and other pulmonary manifestations due to radiation
Disease of respiratory system[accessedResource: SNOMEDCT:50043002][accessDate: 04-11-2010]
Respiratory disorder, NOS[accessedResource: SNOMEDCT:50043002][accessDate: 04-11-2010]
Respiratory disease
Disease of respiratory system, NOS
Unspecified alveolar and parietoalveolar pneumonopathy
NCIt:C26871
RESP SYSTEM DISEASE NOS
Disease of respiratory system, NOS[accessedResource: SNOMEDCT:50043002][accessDate: 04-11-2010]
Respiratory system diseases NOS (disorder)
ICD9:517.8
Respiratory disease[accessedResource: SNOMEDCT:50043002][accessDate: 04-11-2010]
James Malone
RESP SYSTEM DISEASE NEC[accessedResource: ICD9:519.8][accessDate: 04-11-2010]
[X]Other diseases of the respiratory system
[X]Other diseases of the respiratory system (disorder)[accessedResource: SNOMEDCT:196255004][accessDate: 04-11-2010]
RESP COND: EXT AGENT NEC
ALVEOL PNEUMONOPATHY NOS
Respiratory system diseases NOS
INORG DUST PNEUMOCON NEC[accessedResource: ICD9:503][accessDate: 04-11-2010]
Respiratory conditions due to unspecified external agent
Other alveolar and parietoalveolar pneumonopathy[accessedResource: ICD9:516][accessDate: 04-11-2010]
Unspecified disease of respiratory system[accessedResource: ICD9:519.9][accessDate: 04-11-2010]
SNOMEDCT:196244004
[X]Respiratory conditions due to other specified external agents
Other diseases of respiratory system, not elsewhere classified
RESP SYSTEM DISEASE NEC
ICD9:519.1
Respiratory system diseases NOS (disorder)[accessedResource: SNOMEDCT:196185004][accessDate: 04-11-2010]
respiratory system disease
[X]Other diseases of the respiratory system (disorder)
[X]Respiratory conditions due to unspecified external agent (disorder)[accessedResource: SNOMEDCT:196244004][accessDate: 04-11-2010]
CHR PUL MANIF D/T RADIAT[accessedResource: ICD9:508.1][accessDate: 04-11-2010]
Disease of respiratory system
SNOMEDCT:196255004
Other alveolar and parietoalveolar pneumonopathy
Respiratory conditions due to unspecified external agent[accessedResource: ICD9:508.9][accessDate: 04-11-2010]
Other diseases of respiratory system
Other diseases of mediastinum, not elsewhere classified[accessedResource: ICD9:519.3][accessDate: 04-11-2010]
RESP COND: EXT AGENT NOS[accessedResource: ICD9:508.9][accessDate: 04-11-2010]
SNOMEDCT:50043002
Other respiratory system diseases (disorder)
Other respiratory system diseases NOS[accessedResource: SNOMEDCT:266373008][accessDate: 04-11-2010]
Respiratory conditions due to other and unspecified external agents[accessedResource: ICD9:508][accessDate: 04-11-2010]
Unspecified alveolar and parietoalveolar pneumonopathy[accessedResource: ICD9:516.9][accessDate: 04-11-2010]
ICD9:519.9
Pneumoconiosis due to other inorganic dust
CHR PUL MANIF D/T RADIAT
Disease of respiratory system (disorder)
PNEUMOCONIOSES AND OTHER LUNG DISEASES DUE TO EXTERNAL AGENTS[accessedResource: ICD9:500-508.99][accessDate: 04-11-2010]
ICD9:508
Other specified alveolar and parietoalveolar pneumonopathies
ICD9:516.8
SNOMEDCT:196185004
DOID:1579
Respiratory conditions due to other specified external agents[accessedResource: ICD9:508.8][accessDate: 04-11-2010]
Disease of respiratory system (disorder)[accessedResource: SNOMEDCT:50043002][accessDate: 04-11-2010]
ICD9:516.9
ALVEOL PNEUMONOPATHY NEC
DISEASES OF THE RESPIRATORY SYSTEM[accessedResource: ICD9:460-519.99][accessDate: 04-11-2010]
Other diseases of respiratory system NOS (disorder)[accessedResource: SNOMEDCT:196184000][accessDate: 04-11-2010]
ICD9:500-508.99
Other diseases of respiratory system NOS
RESP COND: EXT AGENT NEC[accessedResource: ICD9:508.8][accessDate: 04-11-2010]
RESP SYSTEM DISEASE NOS[accessedResource: ICD9:519.9][accessDate: 04-11-2010]
Other diseases of respiratory system NOS (disorder)
Disorder of respiratory system (disorder)
ICD9:508.9
ICD9:519
ICD9:519.3
ICD9:508.1
DISEASES OF THE RESPIRATORY SYSTEM
Other respiratory system diseases NOS (disorder)[accessedResource: SNOMEDCT:266373008][accessDate: 04-11-2010]
Pneumoconiosis due to other inorganic dust[accessedResource: ICD9:503][accessDate: 04-11-2010]
Chronic and other pulmonary manifestations due to radiation[accessedResource: ICD9:508.1][accessDate: 04-11-2010]
[X]Respiratory conditions due to other specified external agents (disorder)[accessedResource: SNOMEDCT:196243005][accessDate: 04-11-2010]
ICD9:516
Other diseases of trachea and bronchus, not elsewhere classified
ALVEOL PNEUMONOPATHY NEC[accessedResource: ICD9:516.8][accessDate: 04-11-2010]
Chronic and other pulmonary manifestations due to radiation
[X]Respiratory conditions due to other specified external agents[accessedResource: SNOMEDCT:196243005][accessDate: 04-11-2010]
Other respiratory system diseases NOS
SNOMEDCT:196184000
Disorder of respiratory system (disorder)[accessedResource: SNOMEDCT:50043002][accessDate: 04-11-2010]
SNOMEDCT:196241007
Respiratory conditions due to other and unspecified external agents
RESP COND: EXT AGENT NOS
Other diseases of trachea and bronchus, not elsewhere classified[accessedResource: ICD9:519.1][accessDate: 04-11-2010]
A body system disease that occurs in different organs functioning in respiration and consisting especially of the nose, nasal passages, nasopharynx, larynx, trachea, bronchi, and lungs.[accessedResource: DOID:1579][accessDate: 04-11-2010]
SNOMEDCT:266373008
INORG DUST PNEUMOCON NEC
Other diseases of respiratory system[accessedResource: ICD9:519][accessDate: 04-11-2010]
MEDIASTINUM DISEASE NEC
SNOMEDCT:196243005
ICD9:519.8
[X]Other diseases of the respiratory system[accessedResource: SNOMEDCT:196255004][accessDate: 04-11-2010]
Respiratory disorder, NOS
Respiratory disorder[accessedResource: SNOMEDCT:50043002][accessDate: 04-11-2010]
Respiratory system diseases NOS[accessedResource: SNOMEDCT:196185004][accessDate: 04-11-2010]
[X]Respiratory conditions due to unspecified external agent (disorder)
[X]Chronic and other pulmonary manifestations due to radiation[accessedResource: SNOMEDCT:196241007][accessDate: 04-11-2010]
SNOMEDCT:196057004
Other diseases of mediastinum, not elsewhere classified
ALVEOL PNEUMONOPATHY NOS[accessedResource: ICD9:516.9][accessDate: 04-11-2010]
Other respiratory system diseases
Other respiratory system diseases (disorder)[accessedResource: SNOMEDCT:196057004][accessDate: 04-11-2010]
[X]Respiratory conditions due to unspecified external agent
Other respiratory system diseases NOS (disorder)
Other diseases of respiratory system, not elsewhere classified[accessedResource: ICD9:519.8][accessDate: 04-11-2010]
Lung involvement in other diseases classified elsewhere
Disorder of respiratory system
Other specified alveolar and parietoalveolar pneumonopathies[accessedResource: ICD9:516.8][accessDate: 04-11-2010]
LUNG INVOLV IN OTH DIS
ICD9:517
[X]Chronic and other pulmonary manifestations due to radiation (disorder)[accessedResource: SNOMEDCT:196241007][accessDate: 04-11-2010]
[X]Chronic and other pulmonary manifestations due to radiation (disorder)
Other respiratory system diseases[accessedResource: SNOMEDCT:196057004][accessDate: 04-11-2010]
Lung involvement in conditions classified elsewhere[accessedResource: ICD9:517][accessDate: 04-11-2010]
A body system disease that occurs in different organs functioning in respiration and consisting especially of the nose, nasal passages, nasopharynx, larynx, trachea, bronchi, and lungs.
LUNG INVOLV IN OTH DIS[accessedResource: ICD9:517.8][accessDate: 04-11-2010]
Respiratory conditions due to other specified external agents
Unspecified disease of respiratory system
PNEUMOCONIOSES AND OTHER LUNG DISEASES DUE TO EXTERNAL AGENTS
[X]Respiratory conditions due to other specified external agents (disorder)
ICD9:460-519.99
ICD9:503
MEDIASTINUM DISEASE NEC[accessedResource: ICD9:519.3][accessDate: 04-11-2010]
Other diseases of respiratory system NOS[accessedResource: SNOMEDCT:196184000][accessDate: 04-11-2010]
ICD9:508.8
Respiratory disorder
Disorder of respiratory system[accessedResource: SNOMEDCT:50043002][accessDate: 04-11-2010]
[X]Respiratory conditions due to unspecified external agent[accessedResource: SNOMEDCT:196244004][accessDate: 04-11-2010]
ICD9:510-519.99
Lung involvement in conditions classified elsewhere
Lung involvement in other diseases classified elsewhere[accessedResource: ICD9:517.8][accessDate: 04-11-2010]
http://www.arabidopsis.org/servlets/TairObject?id=1005158738&type=germplasm
CS57714 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158738&type=germplasm
CS57714
James Malone
cAMP
Adenosine 3',5'-phosphate
Cyclic adenylic acid
CHEBI:17489
InChIKey=IVOMOUWHDPKRLL-BJEHYBLCDS
(2R,4aR,6R,7R,7aS)-6-(6-amino-9H-purin-9-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol 2-oxide
A 3',5'-cyclic purine nucleotide that has formula C10H12N5O6P.
3',5'-cyclic purine nucleotide having having adenine as the nucleobase.
Cyclic AMP
InChI=1/C10H12N5O6P/c11-8-5-9(13-2-12-8)15(3-14-5)10-6(16)7-4(20-10)1-19-22(17,18)21-7/h2-4,6-7,10,16H,1H2,(H,17,18)(H2,11,12,13)/t4-,6-,7-,10-/m1/s1/f/h17H,11H2
Nc1ncnc2n(cnc12)[C@@H]1O[C@@H]2COP(O)(=O)O[C@H]2[C@H]1O
ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
3',5'-cyclic AMP
C10H12N5O6P
adenosine 3',5'-(hydrogen phosphate)
http://www.ebi.ac.uk/efo/EFO_0001471
IDOMAL:0000296
The distinct stages of the life cycle of a protozoon of the genus Plasmodium.
The distinct stages of the life cycle of a protozoon of the genus Plasmodium.[accessedResource: IDOMAL:0000296][accessDate: 04-11-2010]
plasmodium parasite stage
Tomasz Adamusiak
Jie Zheng
carcinoma of the head and neck[accessedResource: DOID:5520][accessDate: 04-11-2010]
SCCHN
A carcinoma of any tissue within the head and neck region.[accessedResource: NCIt:C35850][accessDate: 04-11-2010]
squamous cell carcinoma of head and neck[accessedResource: DOID:5520][accessDate: 04-11-2010]
Head and Neck Carcinoma[accessedResource: NCIt:C35850][accessDate: 04-11-2010]
James Malone
NCIt:C35850
head and neck squamous cell carcinoma
squamous cell carcinoma of the head and neck[accessedResource: DOID:5520][accessDate: 04-11-2010]
Carcinoma of Head and Neck[accessedResource: NCIt:C35850][accessDate: 04-11-2010]
NCIt:C34447
squamous cell carcinoma of the head and neck
Head and Neck Carcinoma
DOID:5520
Carcinoma of Head and Neck
Squamous Cell Carcinoma of Head and Neck
carcinoma of the head and neck
A carcinoma of any tissue within the head and neck region.
SCCHN[accessedResource: NCIt:C34447][accessDate: 04-11-2010]
Bornean Orangutan
http://www.ebi.ac.uk/efo/EFO_0002653
Pongo pygmaeus
James Malone
The outer non-living layer of the integumentary system derived from the epidermis.
cuticle[accessedResource: MAT:0000150][accessDate: 04-11-2010]
MAT:0000150
exoskeleton
cuticle
James Malone
The outer non-living layer of the integumentary system derived from the epidermis.[accessedResource: FBbt:00004970][accessDate: 04-11-2010]
FBbt:00004970
urinary system
renal/urinary system[accessedResource: MAT:0000027][accessDate: 04-11-2010]
renal system
EMAPA:17366
FBbt:00005056
excretory system[accessedResource: FBbt:00005056][accessDate: 04-11-2010]
SAEL:116
WBbt:0005736
Systema urinaria
ZFA:0000163
EV:0100095
urinary system[accessedResource: MAT:0000027][accessDate: 04-11-2010]
MAT:0000027
EHDAA:5901
renal/urinary system
FMAID:7159
James Malone
excretory system
XAO:0000143
TADS:0000162
TAO:0000163
NYHA class IV
ACC Stage D
advanced heart failure
Tomasz Adamusiak
estra-1,3,5(10)-triene-3,17-diol
estradiol
http://www.ebi.ac.uk/efo/EFO_0001529
InChI=1/C18H24O2/c1-18-9-8-14-13-5-3-12(19)10-11(13)2-4-15(14)16(18)6-7-17(18)20/h3,5,10,14-17,19-20H,2,4,6-9H2,1H3/t14-,15-,16+,17?,18+/m1/s1
oestradiol
InChIKey=VOXZDWNPVJITMN-WKUFJEKOBY
C18H24O2
[H][C@]12CC[C@]3(C)C(O)CC[C@@]3([H])[C@]1([H])CCc1cc(O)ccc21
A steroid hormone that has formula C18H24O2.
mandibula[accessedResource: BTO:0001748][accessDate: 04-11-2010]
James Malone
1: The lower jaw of a vertebrate animal. n2. Either the upper or lower part of the beak in birds.
BTO:0001748
mandible
lower jaw bone
1: The lower jaw of a vertebrate animal. n2. Either the upper or lower part of the beak in birds.[accessedResource: BTO:0001748][accessDate: 04-11-2010]
mandibula
Calu-6
Calu6
James Malone
Ele Holloway
The pressure exerted by a liquid as a result of its potential energy, ignoring its kinetic energy.
hydrostatic pressure
James Malone
HTLV-Associated Leukemia-Lymphomas
GeneRIF:15827121
GeneRIF:15990867
HTLV Associated Leukemia Lymphoma[accessedResource: MSH:D015459][accessDate: 04-11-2010]
MSH:D015459
Aggressive T-Cell malignancy with adult onset, caused by HUMAN T-LYMPHOTROPIC VIRUS 1. It is endemic in Japan, the Caribbean basin, Southeastern United States, Hawaii, and parts of Central and South America and sub-Saharan Africa.
NCIt:C3183
Acute T Cell Lymphocytic Leukemia[accessedResource: NCIt:C3183][accessDate: 04-11-2010]
T Acute Lymphoblastic Leukemia
Precursor T-Lymphoblastic Leukemia[accessedResource: NCIt:C3183][accessDate: 04-11-2010]
T-Cell Type Acute Leukemia
T-Cell Leukemias, Adult
HTLV-I-Associated T-Cell Leukemia-Lymphoma
T Acute Lymphoblastic Leukemia[accessedResource: NCIt:C3183][accessDate: 04-11-2010]
Precursor T-cell lymphoblastic leukaemia
ATLL
Adult T-Cell Leukemia-Lymphomas
HTLV-I-Associated T-Cell Leukemia-Lymphomas[accessedResource: MSH:D015459][accessDate: 04-11-2010]
T-Cell Type Acute Leukemia[accessedResource: NCIt:C3183][accessDate: 04-11-2010]
Acute lymphoblastic leukemia of T-cell origin. It comprises about 15% of childhood cases and 25% of adult cases. It is more common in males than females. (WHO, 2001)[accessedResource: NCIt:C3183][accessDate: 04-11-2010]
HTLV ALL[accessedResource: MSH:D015459][accessDate: 04-11-2010]
GeneRIF:12970786
Leukemia-Lymphoma, T-Cell, Acute, HTLV-I-Associated[accessedResource: MSH:D015459][accessDate: 04-11-2010]
This type of acute lymphoblastic leukemia comprises about 15% of childhood cases and 25% of adult cases. It is more common in males than females. (WHO, 2001)
Precursor T-cell lymphoblastic leukaemia[accessedResource: SNOMEDCT:277575008][accessDate: 04-11-2010]
HTLV-Associated Leukemia-Lymphomas[accessedResource: MSH:D015459][accessDate: 04-11-2010]
Precursor T-cell lymphoblastic leukemia
T-ALL[accessedResource: NCIt:C3183][accessDate: 04-11-2010]
T-cell acute lymphoblastic leukemia (disorder)
James Malone
ATLL[accessedResource: MSH:D015459][accessDate: 04-11-2010]
T-cell acute lymphoblastic leukaemia
Human T Lymphotropic Virus-Associated Leukemia-Lymphoma
acute T cell leukemia
GeneRIF:16326981
Precursor T-Lymphoblastic Leukemia
GeneRIF:16079893
T-Cell Leukemia-Lymphoma, Human
GeneRIF:16287841
T-Cell Leukemia-Lymphoma, Adult[accessedResource: MSH:D015459][accessDate: 04-11-2010]
DOID:5603
Adult T-Cell Leukemia-Lymphoma
Acute T Cell Lymphocytic Leukemia
HTLV ALL
T-ALL
Leukemia-Lymphomas, HTLV-I-Associated T-Cell
T-cell acute lymphoblastic leukemia (disorder)[accessedResource: SNOMEDCT:277575008][accessDate: 04-11-2010]
HTLV-Associated Leukemia-Lymphoma
Acute lymphoblastic leukemia of T-cell origin. It comprises about 15% of childhood cases and 25% of adult cases. It is more common in males than females. (WHO, 2001)
Leukemia-Lymphomas, Human T-Cell[accessedResource: MSH:D015459][accessDate: 04-11-2010]
Human T-Cell Leukemia-Lymphoma[accessedResource: MSH:D015459][accessDate: 04-11-2010]
Aggressive T-Cell malignancy with adult onset, caused by HUMAN T-LYMPHOTROPIC VIRUS 1. It is endemic in Japan, the Caribbean basin, Southeastern United States, Hawaii, and parts of Central and South America and sub-Saharan Africa.[accessedResource: MSH:D015459][accessDate: 04-11-2010]
SNOMEDCT:277575008
Leukemia, Adult T-Cell
Precursor T-cell lymphoblastic leukemia[accessedResource: SNOMEDCT:277575008][accessDate: 04-11-2010]
T-Cell Leukemia-Lymphomas, Human
Acute T-Cell Leukemia[accessedResource: NCIt:C3183][accessDate: 04-11-2010]
T-cell acute lymphoblastic leukaemia[accessedResource: SNOMEDCT:277575008][accessDate: 04-11-2010]
Leukemia Lymphoma, T Cell, Acute, HTLV I Associated
T-Cell Leukemia-Lymphomas, Adult[accessedResource: MSH:D015459][accessDate: 04-11-2010]
Leukemia, Adult T-Cell[accessedResource: MSH:D015459][accessDate: 04-11-2010]
Human T Lymphotropic Virus-Associated Leukemia-Lymphoma[accessedResource: MSH:D015459][accessDate: 04-11-2010]
T-cell acute lymphoblastic leukemia
GeneRIF:15472075
HTLV I Associated T Cell Leukemia Lymphoma[accessedResource: MSH:D015459][accessDate: 04-11-2010]
GeneRIF:11937265
Adult T-Cell Leukemias[accessedResource: MSH:D015459][accessDate: 04-11-2010]
true
CNS - Brain - Hippocampus (MMHCC)[accessedResource: NCIt:C22615][accessDate: 10-05-2010]
Hippocampus
Hippocampus[accessedResource: NCIt:C22615][accessDate: 10-05-2010]
CNS - Brain - Hippocampus (MMHCC)
NCIt:C22615
Obsolete - term hippocampus already exists
obsolete_CNS brain hippocampus MMHCC
1.8
true
obsolete_cell factor
James Malone
class no longer needed for organizational purposes. Also hard to decide what an instance of a cell factor is.
http://www.arabidopsis.org/servlets/TairObject?id=1005158573&type=germplasm
CS57549 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158573&type=germplasm
CS57549
James Malone
A role played by a a biological sample in the context of a microarray experiment where the intent is that biological or technical variation is measured.
replicate
James Malone
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311932
CS57511 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311932.
CS57511
James Malone
QG56
James Malone
Ele Holloway
http://jaxmice.jax.org/strain/009301.html
ILSXISS25/TejJ
Tomasz Adamusiak
Familial amyotrophic lateral sclerosis is a amyotrophic lateral sclerosis in which a family history of the disease exists.
familial amyotrophic lateral sclerosis
James Malone
http://www.ebi.ac.uk/efo/EFO_0001863
CHEBI:37890
alpha-adrenergic receptor blockaders
An agent that binds to but does not activate alpha-adrenergic receptors thereby blocking the actions of endogenous or exogenous alpha-adrenergic agonists. alpha-Adrenergic antagonists are used in the treatment of hypertension, vasospasm, peripheral vascular disease, shock, and pheochromocytoma.
alpha-adrenergic antagonist
alpha-adrenergic blockers
James Malone
alpha-adrenergic antagonists
alpha-adrenoceptor antagonists
alpha-adrenergic blocker
HBL100
James Malone
A phytoestrogenic isoflavone with antioxidant properties.
James Malone
Sophoricol
C15H10O5
genistein
A hydroxyisoflavone that has formula C15H10O5.
5,7-dihydroxy-3-(4-hydroxyphenyl)-4H-chromen-4-one
InChIKey=TZBJGXHYKVUXJN-UHFFFAOYAH
http://www.ebi.ac.uk/efo/EFO_0001542
CHEBI:28088
InChI=1/C15H10O5/c16-9-3-1-8(2-4-9)11-7-20-13-6-10(17)5-12(18)14(13)15(11)19/h1-7,16-18H
4',5,7-trihydroxyisoflavone
Oc1ccc(cc1)-c1coc2cc(O)cc(O)c2c1=O
Prunetol
EBC-1
James Malone
GM12146
James Malone
http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
129/Sv is a substrain of the mouse strain 129 as described in Jackson Laboratory http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
129/Sv
James Malone
http://jaxmice.jax.org/strain/009257.html
ILSXISS3/TejJ
Tomasz Adamusiak
C15H20O4
CC(\\C=C\\C1(O)C(C)=CC(=O)CC1(C)C)=C\\C(O)=O
InChIKey=JLIDBLDQVAYHNE-RGWLVKBGDZ
An apo carotenoid sesquiterpenoid that has formula C15H20O4.
CHEBI:22152
InChI=1/C15H20O4/c1-10(7-13(17)18)5-6-15(19)11(2)8-12(16)9-14(15,3)4/h5-8,19H,9H2,1-4H3,(H,17,18)/b6-5+,10-7-/f/h17H
Abscisinsaeure
acide abscissique
Abszisinsaeure
acido abscisico
(2Z,4E)-5-(1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl)-3-methylpenta-2,4-dienoic acid
abscisic acid
http://www.ebi.ac.uk/efo/EFO_0001477
true
UO:0000036
http://www.ebi.ac.uk/efo/EFO_0001725
A year is a derived time unit which is equal to 365.25 days.
A time unit which is equal to 12 months which is science is taken to be equal to 365.25 days.
year
James Malone
PUBMED ID: 15015938
129xC57BL/6 is a substrain of the mouse strain 129 as described in article PUBMED ID 15015938
129xC57BL/6
James Malone
NCI-H2405
James Malone
Ele Holloway
InChIKey=LNAZSHAWQACDHT-XIYTZBAFBM
Methylcellulosum
Cellulose methylate
cellulose methyl ether
CHEBI:53448
Tomasz Adamusiak
A (1->4)-beta-D-glucan compound formed by methylating cellulose through exposure to NaOH/CH3Cl.
Metilcelulosa
methylated cellulose
InChI=1/C29H54O16/c1-30-12-15-18(33-4)21(34-5)25(38-9)28(42-15)45-20-17(14-32-3)43-29(26(39-10)23(20)36-7)44-19-16(13-31-2)41-27(40-11)24(37-8)22(19)35-6/h15-29H,12-14H2,1-11H3/t15-,16-,17-,18-,19-,20-,21+,22+,23+,24-,25-,26-,27-,28+,29+/m1/s1
methylcellulose
E461
http://www.ebi.ac.uk/efo/EFO_0002735
(C9H16O5)n
methyl cellulose
Ele Holloway
Ancient neurilemoma
A tumor of the peripheral nervous system composed of neoplastic Schwann cells. The vast majority of schwannomas follow a benign clinical course. Only rare cases associated with a malignant clinical course have been reported.[accessedResource: NCIt:C3269][accessDate: 04-11-2010]
NCIt:C3269
GeneRIF:12444102
Acoustic neuroma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
Neurinoma
SNOMEDCT:985004
Neurilemmoma, NOS[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
Plexiform Schwannomatosis
Pigmented schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
NCIt:C6556
Degenerated Schwannoma[accessedResource: NCIt:C6556][accessDate: 04-11-2010]
Ancient neurilemmoma (disorder)
Neurilemmoma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
Psammomatous schwannoma
Plexiform Schwannomatoses
Pigmented Schawnnoma
Neurilemoma
Neurinomas[accessedResource: MSH:D009442][accessDate: 04-11-2010]
Ancient Schwannoma[accessedResource: SNOMEDCT:404023006][accessDate: 04-11-2010]
SNOMEDCT:409704009
Neurilemomas
Neurilemmomas
Neurilemmosarcoma
Plexiform Schwannomatoses[accessedResource: MSH:D009442][accessDate: 04-11-2010]
Schwannoma, NOS
Ancient neurilemmoma
Ancient neurilemmoma[accessedResource: SNOMEDCT:404023006][accessDate: 04-11-2010]
Acoustic neuroma
A neoplasm that arises from SCHWANN CELLS of the cranial, peripheral, and autonomic nerves. Clinically, these tumors may present as a cranial neuropathy, abdominal or soft tissue mass, intracranial lesion, or with spinal cord compression. Histologically, these tumors are encapsulated, highly vascular, and composed of a homogenous pattern of biphasic fusiform-shaped cells that may have a palisaded appearance. (From DeVita Jr et al., Cancer: Principles and Practice of Oncology, 5th ed, pp964-5)[accessedResource: MSH:D009442][accessDate: 04-11-2010]
Plexiform schwannoma
Degenerated Neurilemmoma
GeneRIF:14566860
GeneRIF:15837555
Neurilemomas, Malignant[accessedResource: MSH:D009442][accessDate: 04-11-2010]
A neoplasm that arises from SCHWANN CELLS of the cranial, peripheral, and autonomic nerves. Clinically, these tumors may present as a cranial neuropathy, abdominal or soft tissue mass, intracranial lesion, or with spinal cord compression. Histologically, these tumors are encapsulated, highly vascular, and composed of a homogenous pattern of biphasic fusiform-shaped cells that may have a palisaded appearance (MeSH).
Neurilemmoma
Neurilemmoma (disorder)[accessedResource: DOID:3192][accessDate: 04-11-2010]
SNOMEDCT:404023006
Schwannoma, NOS[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
GeneRIF:13679444
NIFSTD:birnlex_12603
Plexiform schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
Neurilemoma (morphologic abnormality)[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
A neoplasm that arises from SCHWANN CELLS of the cranial, peripheral, and autonomic nerves. Clinically, these tumors may present as a cranial neuropathy, abdominal or soft tissue mass, intracranial lesion, or with spinal cord compression. Histologically, these tumors are encapsulated, highly vascular, and composed of a homogenous pattern of biphasic fusiform-shaped cells that may have a palisaded appearance (MeSH).[accessedResource: NIFSTD:birnlex_12603][accessDate: 04-11-2010]
MSH:D009442
Neurilemmosarcomas
Neurilemoma (morphologic abnormality)
A neoplasm that arises from SCHWANN CELLS of the cranial, peripheral, and autonomic nerves. Clinically, these tumors may present as a cranial neuropathy, abdominal or soft tissue mass, intracranial lesion, or with spinal cord compression. Histologically, these tumors are encapsulated, highly vascular, and composed of a homogenous pattern of biphasic fusiform-shaped cells that may have a palisaded appearance. (From DeVita Jr et al., Cancer: Principles and Practice of Oncology, 5th ed, pp964-5)
A tumor of the peripheral nervous system composed of neoplastic Schwann cells. The vast majority of schwannomas follow a benign clinical course. Only rare cases associated with a malignant clinical course have been reported.
Neurilemomas[accessedResource: MSH:D009442][accessDate: 04-11-2010]
Ancient schwannoma
Malignant Neurilemoma
Melanotic schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
GeneRIF:15850583
GeneRIF:12665675
Schwannomas[accessedResource: MSH:D009442][accessDate: 04-11-2010]
Neurilemmosarcoma[accessedResource: NIFSTD:birnlex_12603][accessDate: 04-11-2010]
Ancient schwannoma (morphologic abnormality)
GeneRIF:12118253
schwannoma
Degenerated Schwannoma
Plexiform Schwannomatosis[accessedResource: MSH:D009442][accessDate: 04-11-2010]
Ancient neurilemmoma (disorder)[accessedResource: SNOMEDCT:404023006][accessDate: 04-11-2010]
Schwannomas
Neurilemoma[accessedResource: SNOMEDCT:404022001][accessDate: 04-11-2010]
Neurilemmomas[accessedResource: MSH:D009442][accessDate: 04-11-2010]
Degenerated Neurilemmoma[accessedResource: NCIt:C6556][accessDate: 04-11-2010]
Psammomatous schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
Pigmented schwannoma
Melanotic schwannoma
Neurilemmoma, NOS
DOID:3192
Neurilemmosarcomas[accessedResource: MSH:D009442][accessDate: 04-11-2010]
Ancient schwannoma (morphologic abnormality)[accessedResource: SNOMEDCT:409704009][accessDate: 04-11-2010]
Melanocytic Schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
Neurilemmoma (disorder)
Ancient neurilemoma[accessedResource: SNOMEDCT:409704009][accessDate: 04-11-2010]
Neurinomas
James Malone
GeneRIF:14612918
Cellular schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
Pigmented Schawnnoma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
Neurilemomas, Malignant
Melanocytic Schwannoma
Malignant Neurilemoma[accessedResource: MSH:D009442][accessDate: 04-11-2010]
Tomasz Adamusiak
Neurinoma[accessedResource: NCIt:C3269][accessDate: 04-11-2010]
SNOMEDCT:404022001
Cellular schwannoma
BTO:0001408
locus ceruleus[accessedResource: BTO:0001408][accessDate: 04-11-2010]
locus caeruleus
locus coeruleus
locus caeruleus[accessedResource: BTO:0001408][accessDate: 04-11-2010]
locus cinereus[accessedResource: BTO:0001408][accessDate: 04-11-2010]
locus ceruleus
James Malone
locus cinereus
A SCN2.2 is a cell line.
A SCN2.2 is both something that derives from a rattus norvegicus, and something that derives from a
suprachiasmatic nucleus.
SCN2.2
Natural Language Generator 8th April 2010
James Malone
Ele Holloway
NCIt:C53482
An acute viral infection of the respiratory tract, occurring in isolated cases, in epidemics, or in pandemics; it is caused by serologically different strains of viruses (influenzaviruses) designated A, B, and C, has a 3-day incubation period, and usually lasts for 3 to 10 days. It is marked by inflammation of the nasal mucosa, pharynx, and conjunctiva; headache; myalgia; often fever, chills, and prostration; and occasionally involvement of the myocardium or central nervous system.
An acute viral infection of the respiratory tract, occurring in isolated cases, in epidemics, or in pandemics; it is caused by serologically different strains of viruses (influenzaviruses) designated A, B, and C, has a 3-day incubation period, and usually lasts for 3 to 10 days. It is marked by inflammation of the nasal mucosa, pharynx, and conjunctiva; headache; myalgia; often fever, chills, and prostration; and occasionally involvement of the myocardium or central nervous system.[accessedResource: NCIt:C53482][accessDate: 04-11-2010]
influenza
James Malone
EMAPA:17528
A cellular, multilayered epithelium derived from the ectoderm. Zebrafish epidermis consists only of living cells unlike terrestrial vertebrates in which dead, keratinized cells are present.
EV:0100153
FBbt:00005401
AAO:0000143
hypodermis[accessedResource: MAT:0000154][accessDate: 04-11-2010]
James Malone
The outer epithelial layer of the external integument of the animal body that is derived from the embryonic epiblast; specifically: the outer nonsensitive and nonvascular layer of the skin of a vertebrate that overlies the dermis.[accessedResource: BTO:0000404][accessDate: 04-11-2010]
SAEL:35
hypodermis
FMAID:70596
adult epidermis
A cellular, multilayered epithelium derived from the ectoderm. Zebrafish epidermis consists only of living cells unlike terrestrial vertebrates in which dead, keratinized cells are present.[accessedResource: ZFA:0000105][accessDate: 04-11-2010]
TADS:0000109
MAT:0000154
The outer epithelial layer of the external integument of the animal body that is derived from the embryonic epiblast; specifically: the outer nonsensitive and nonvascular layer of the skin of a vertebrate that overlies the dermis.
MA:0000153
BTO:0000404
adult epidermis[accessedResource: FBbt:00005401][accessDate: 04-11-2010]
ZFA:0000105
epidermis
WBbt:0005733
http://jaxmice.jax.org/strain/009280.html
ILSXISS86/TejJ
Tomasz Adamusiak
benign insulitis
James Malone
Ele Holloway
HCC461
James Malone
http://www.ebi.ac.uk/efo/EFO_0001829
CHEBI:26158
phytohormone
James Malone
MDAMB175VII
James Malone
Knock in expression is a process in which a gene is replaced by an altered version of the same gene using homologous recombination resulting in a gain of function.
knock in expression
James Malone
SW982
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158928&type=germplasm
CS57904 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158928&type=germplasm
CS57904
James Malone
2.1
true
obsolete_GM12892
James Malone
duplicate with EFO_0002786
plasmidotrophoblast
syntrophoblast
syncytial trophoblast[accessedResource: CL:0000525][accessDate: 04-11-2010]
A cell from the outer syncytial layer of the trophoblast of an early mammalian embryo. It It secretes hCG in order to maintain progesterone secretion and sustain a pregnancy.
syncytiotrophoblast cell
syncytial trophoblast
Tomasz Adamusiak
syntrophoblast[accessedResource: CL:0000525][accessDate: 04-11-2010]
CL:0000525
plasmidotrophoblast[accessedResource: CL:0000525][accessDate: 04-11-2010]
A cell from the outer syncytial layer of the trophoblast of an early mammalian embryo. It It secretes hCG in order to maintain progesterone secretion and sustain a pregnancy.[accessedResource: CL:0000525][accessDate: 04-11-2010]
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mg
A milligram is a mass unit which is equal to one-millionth of a kilogram.
MO_949
milligram
A mass unit which is equal to one thousandth of a gram or 10^[-3] g.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mg[accessedResource: MO_949][accessDate: 04-11-2010]
Jie Zheng
true
Tomasz Adamusiak
mg
http://www.ebi.ac.uk/efo/EFO_0001706
NCIt:C44085
Pima
Pima[accessedResource: NCIt:C44085][accessDate: 04-11-2010]
Pima Indian
Tomasz Adamusiak
EB1
James Malone
Ele Holloway
SNOMEDCT:2492009
NUTRITION DIS
James Malone
Nutritional disease
NCIt:C26836
Nutritional Disorders
Malnutrition[accessedResource: SNOMEDCT:2492009][accessDate: 04-11-2010]
NUTRITIONAL DIS
Disorders caused by nutritional imbalance, either overnutrition or undernutrition.
NUTRITIONAL DIS[accessedResource: MSH:D009748][accessDate: 04-11-2010]
Nutritional disorder, NOS
Nutritional disease, NOS
MSH:D009748
NUTRITION DIS[accessedResource: MSH:D009748][accessDate: 04-11-2010]
Nutritional disease, NOS[accessedResource: SNOMEDCT:2492009][accessDate: 04-11-2010]
Disorder of nutrition
Nutritional disorder (disorder)[accessedResource: DOID:374][accessDate: 04-11-2010]
Disorder of nutrition[accessedResource: SNOMEDCT:2492009][accessDate: 04-11-2010]
Nutritional disorder (disorder)
Nutrition disorder
Nutritional disease[accessedResource: SNOMEDCT:2492009][accessDate: 04-11-2010]
nutritional disorder
Disorders caused by nutritional imbalance, either overnutrition or undernutrition.[accessedResource: MSH:D009748][accessDate: 04-11-2010]
Nutrition Disorders[accessedResource: MSH:D009748][accessDate: 04-11-2010]
Nutrition Disorder[accessedResource: MSH:D009748][accessDate: 04-11-2010]
DOID:374
Nutritional Disorders[accessedResource: MSH:D009748][accessDate: 04-11-2010]
Malnutrition
Nutrition Disorders
Nutritional disorder, NOS[accessedResource: SNOMEDCT:2492009][accessDate: 04-11-2010]
proximal portion of right coronary artery
First segment of right coronary artery[accessedResource: FMAID:3804][accessDate: 04-11-2010]
Anterior segment of right coronary artery[accessedResource: FMAID:3804][accessDate: 04-11-2010]
Jie Zheng
FMAID:3804
Tomasz Adamusiak
Anterior segment of right coronary artery
First segment of right coronary artery
saline
one-cell stage
Kupffer's vesicle[accessedResource: ZFA:0000001][accessDate: 04-11-2010]
MAT:0000074
EMAPA:16033
XAO:0000035
CL:0000365
FBdv:00005288
ZFA:0000001
Zygote:1-cell
Small but distinctive epithelial sac containing fluid, located midventrally posterior to the yolk cell or its extension, and transiently present during most of the segmentation period. Kupffer's vesicle has been compared to the mouse embryonic node.
Zygote:1-cell[accessedResource: ZFS:0000001][accessDate: 04-11-2010]
zygote
Tomasz Adamusiak
Diploid cell produced by the fusion of sperm cell nucleus and egg cell.[accessedResource: CL:0000365][accessDate: 04-11-2010]
Small but distinctive epithelial sac containing fluid, located midventrally posterior to the yolk cell or its extension, and transiently present during most of the segmentation period. Kupffer's vesicle has been compared to the mouse embryonic node.[accessedResource: ZFA:0000001][accessDate: 04-11-2010]
EHDAA:27
ZFS:0000001
Kupffer's vesicle
zygote[accessedResource: CL:0000365][accessDate: 04-11-2010]
Diploid cell produced by the fusion of sperm cell nucleus and egg cell.
James Malone
EVM:2990001
MFO:0005280
one-cell stage[accessedResource: MAT:0000074][accessDate: 04-11-2010]
fertilized egg stage
Helen Parkinson
fibrocystic disease of breast
diffuse cystic mastopathy
breast fibrocystic disease is a benign mammary displasia characterised by breast discomfort and 'lumpiness'
breast fibrocystic disease
MOLT16
James Malone
Ele Holloway
Acute erythremia and erythroleukemia without mention of remission[accessedResource: ICD9:207.00][accessDate: 04-11-2010]
James Malone
acute erythroleukemia
acute erythremia and erythroleukemia
acute erythremia and erythroleukemia[accessedResource: DOID:1239][accessDate: 04-11-2010]
DOID:1239
Tomasz Adamusiak
Acute erythremia and erythroleukemia without mention of remission
acute erythroid leukemia
ACT ERTH/ERYLK W/O RMSON
ICD9:207.00
ICD9:207.0
ACT ERTH/ERYLK W/O RMSON[accessedResource: ICD9:207.00][accessDate: 04-11-2010]
MO_663
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#heating_block
http://www.ebi.ac.uk/efo/EFO_0002017
A heating block is an instrument or part of an instrument which raises or maintains the temperature of a sample to a defined constant temperature during certain parts of an assay
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#heating_block[accessedResource: MO_663][accessDate: 04-11-2010]
heating block
James Malone
sarcoblast
James Malone
An embryonic cell that becomes a cell of muscle fiber.
myoblast
An embryonic cell that becomes a cell of muscle fiber.[accessedResource: BTO:0000222][accessDate: 04-11-2010]
An embryonic (precursor) cell of the myogenic lineage that develops from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes.
sarcoblast[accessedResource: BTO:0000222][accessDate: 04-11-2010]
BTO:0000222
An embryonic (precursor) cell of the myogenic lineage that develops from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes.[accessedResource: CL:0000056][accessDate: 04-11-2010]
CL:0000056
A class of large neuroglial (macroglial) cells in the central nervous system. Oligodendroglia may be called interfascicular, perivascular, or perineuronal (not the same as satellite cells, perineuronal of ganglia) according to their location. They form the insulating myelin sheath of axons in the central nervous system (MSH).[accessedResource: NIFSTD:sao844118448][accessDate: 04-11-2010]
oligodendrocyte
oligodendroglia[accessedResource: CL:0000128][accessDate: 04-11-2010]
A class of large neuroglial (macroglial) cells in the central nervous system. Form the insulating myelin sheath of axons in the central nervous system.[accessedResource: CL:0000128][accessDate: 04-11-2010]
oligodendroglia
A class of large neuroglial (macroglial) cells in the central nervous system. Form the insulating myelin sheath of axons in the central nervous system.
Tomasz Adamusiak
A class of large neuroglial (macroglial) cells in the central nervous system. Oligodendroglia may be called interfascicular, perivascular, or perineuronal (not the same as satellite cells, perineuronal of ganglia) according to their location. They form the insulating myelin sheath of axons in the central nervous system (MSH).
NIFSTD:sao844118448
CL:0000128
NIFSTD:sao2146594471
MAT:0000481
muscle precursor cell
A precursor is a tissue modifier describing a substance, cell, or cellular component from which another substance, cell, or cellular component is formed. For example, muscle precursor cell.
precursor
Tomasz Adamusiak
James Malone
GeneRIF:14514642
SNOMEDCT:315299009
GeneRIF:12196481
GeneRIF:12149242
[D]Hyperglycemia (situation)[accessedResource: SNOMEDCT:315299009][accessDate: 04-11-2010]
hyperglycemia (disorder)[accessedResource: DOID:4195][accessDate: 04-11-2010]
GeneRIF:15561954
GeneRIF:15845625
GeneRIF:14984315
[D]Hyperglycaemia[accessedResource: SNOMEDCT:315299009][accessDate: 04-11-2010]
GeneRIF:14578285
Hyperglycemia, NOS[accessedResource: SNOMEDCT:80394007][accessDate: 04-11-2010]
GeneRIF:14749287
GeneRIF:12963802
Abnormally high BLOOD GLUCOSE level after a meal.
GeneRIF:12376320
GeneRIF:12759458
GeneRIF:15855318
Abnormally high BLOOD GLUCOSE level.[accessedResource: MSH:D006943][accessDate: 04-11-2010]
GeneRIF:11959624
GeneRIF:12645629
Hyperglycemia, Postprandial
GeneRIF:12453975
Hyperglycemias, Postprandial[accessedResource: MSH:D006943][accessDate: 04-11-2010]
[D]Hyperglycemia (situation)
[D]Hyperglycemia (context-dependent category)[accessedResource: SNOMEDCT:315299009][accessDate: 04-11-2010]
GeneRIF:15259033
GeneRIF:15486815
GeneRIF:15985479
GeneRIF:15868137
Hyperglycemia, Postprandial[accessedResource: MSH:D006943][accessDate: 04-11-2010]
Hyperglycaemia, NOS[accessedResource: SNOMEDCT:80394007][accessDate: 04-11-2010]
Abnormally high BLOOD GLUCOSE level.
Hyperglycaemia[accessedResource: SNOMEDCT:80394007][accessDate: 04-11-2010]
GeneRIF:15662550
[D]Elevated blood glucose level[accessedResource: SNOMEDCT:315299009][accessDate: 04-11-2010]
GeneRIF:12107734
Hyperglycemia, NOS
DOID:4195
GeneRIF:12464674
GeneRIF:12522068
GeneRIF:15899886
GeneRIF:14534319
[D]Hyperglycemia (context-dependent category)
GeneRIF:15561908
Hyperglycemias[accessedResource: MSH:D006943][accessDate: 04-11-2010]
Postprandial Hyperglycemias
Hyperglycaemia
GeneRIF:12137596
GeneRIF:12736712
GeneRIF:15277392
GeneRIF:15993383
GeneRIF:15899957
GeneRIF:14678947
GeneRIF:12655575
[D]Hyperglycemia
GeneRIF:15148392
[D]Hyperglycaemia
Hyperglycaemia, NOS
James Malone
SNOMEDCT:80394007
GeneRIF:12765965
GeneRIF:15920055
GeneRIF:15501243
GeneRIF:14673082
hyperglycemia (context-dependent category)
hyperglycemia
GeneRIF:15616014
GeneRIF:16301823
GeneRIF:15677479
GeneRIF:15033467
Abnormally high BLOOD GLUCOSE level after a meal.[accessedResource: MSH:D006943][accessDate: 04-11-2010]
Hyperglycemias
hyperglycemia (disorder)
GeneRIF:15191885
GeneRIF:12819007
GeneRIF:12482638
GeneRIF:15848159
[D]Elevated blood glucose level
hyperglycemia (context-dependent category)[accessedResource: DOID:4195][accessDate: 04-11-2010]
[D]Hyperglycemia[accessedResource: SNOMEDCT:315299009][accessDate: 04-11-2010]
MSH:D006943
GeneRIF:14751239
GeneRIF:15010337
GeneRIF:15956778
GeneRIF:14698990
GeneRIF:12860835
corpora pedunculata[accessedResource: FBbt:00005801][accessDate: 04-11-2010]
Paired neuropil structure, situated postero-dorsally in the protocerebrum, which are thought to be crucial to olfactory associative learning and memory. Mushroom bodies are divided into: the calyx, closest to the cortex, which receives sensory interneuron afferents; a thick axon bundle called the pedunculus, which extends from the calyx to the base of the lobes; the mushroom body lobe system consisting of a vertical branch composed of two intertwined lobes (alpha and alpha') and a medial branch consisting of three parallel lobes (beta, beta' and gamma).
BTO:0002675
MAT:0000336
corpora pedunculata
FBbt:00005801
Bilaterally paired neuropil structure situated postero-dorsally in the protocerebrum that functions in olfactory associative learning and memory. The mushroom body is divided into: the calyx, which is closest to the cortex and receives sensory interneuron afferents; the pedunculus, which is a thick axon bundle extending from the calyx to the base of the lobes; the mushroom body lobe system, which consists of a vertical branch composed of two intertwined lobes (alpha and alpha') and a medial branch consisting of three parallel lobes (beta, beta' and gamma).[accessedResource: FBbt:00005801][accessDate: 04-11-2010]
Paired neuropil structure situated postero-dorsally in the protocerebrum, which are thought to be crucial to olfactory associative learning and memory. The mushroom body is divided into: the calyx, which is closest to the cortex and receives sensory interneuron afferents; the pedunculus, which is a thick axon bundle extending from the calyx to the base of the lobes; the mushroom body lobe system, which consists of a vertical branch composed of two intertwined lobes (alpha and alpha') and a medial branch consisting of three parallel lobes (beta, beta' and gamma).
The Drosophila mushroom bodies (MBs), paired brain structures composed of vertical and medial lobes, achieve their final organization at metamorphosis.[accessedResource: BTO:0002675][accessDate: 04-11-2010]
James Malone
mushroom body
Bilaterally paired neuropil structure situated postero-dorsally in the protocerebrum that functions in olfactory associative learning and memory. The mushroom body is divided into: the calyx, which is closest to the cortex and receives sensory interneuron afferents; the pedunculus, which is a thick axon bundle extending from the calyx to the base of the lobes; the mushroom body lobe system, which consists of a vertical branch composed of two intertwined lobes (alpha and alpha') and a medial branch consisting of three parallel lobes (beta, beta' and gamma).
The Drosophila mushroom bodies (MBs), paired brain structures composed of vertical and medial lobes, achieve their final organization at metamorphosis.
SQ-5
James Malone
Ele Holloway
NCIt:C26788
chronic granulomatous disease
A recessive X-linked defect of leukocyte function in which phagocytic cells ingest but fail to digest bacteria, resulting in recurring bacterial infections with granuloma formation.
GRANULOMATOUS DIS CHRONIC
GeneRIF:15777347
MSH:D006105
Congenital dysphagocytosis (disorder)[accessedResource: SNOMEDCT:191352003][accessDate: 04-11-2010]
GeneRIF:16138344
Chronic granulomatous disease (disorder)[accessedResource: SNOMEDCT:387759001][accessDate: 04-11-2010]
James Malone
Chronic granulomatous disease (disorder)
GeneRIF:12817011
GeneRIF:11462241
GeneRIF:12073015
GeneRIF:12589359
A recessive X-linked defect of leukocyte function in which phagocytic cells ingest but fail to digest bacteria, resulting in recurring bacterial infections with granuloma formation.[accessedResource: MSH:D006105][accessDate: 04-11-2010]
GRANULOMATOUS DIS CHRONIC[accessedResource: MSH:D006105][accessDate: 04-11-2010]
Granulomatous Diseases, Chronic[accessedResource: MSH:D006105][accessDate: 04-11-2010]
Granulomatous Diseases, Chronic
CGD[accessedResource: DOID:3265][accessDate: 04-11-2010]
CGD - Chronic granulomatous disease[accessedResource: SNOMEDCT:387759001][accessDate: 04-11-2010]
CGD - Chronic granulomatous disease
Congenital dysphagocytosis[accessedResource: SNOMEDCT:191352003][accessDate: 04-11-2010]
GeneRIF:15507755
CGD
SNOMEDCT:387759001
Congenital dysphagocytosis (disorder)
DOID:3265
GeneRIF:12213046
SNOMEDCT:191352003
Congenital dysphagocytosis
A673
James Malone
Ele Holloway
Invasive Lobular Carcinoma of Breast
James Malone
Infiltrating Lobular Carcinoma of Breast[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
Invasive Lobular carcinoma of breast[accessedResource: DOID:3460][accessDate: 04-11-2010]
Infiltrating Lobular Carcinoma of Breast
An infiltrating lobular adenocarcinoma. The malignant cells lack cohesion and are arranged individually or in a linear manner (Indian files), or as narrow trabeculae within the stroma. The malignant cells are usually smaller than those of ductal carcinoma, are less pleomorphic, and have fewer mitotic figures.
Invasive Lobular Carcinoma, Classic Type
Invasive Lobular Breast Carcinoma[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
Infiltrating Lobular Carcinoma of the Breast[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
Invasive Lobular Carcinoma of the Breast
Infiltrating Lobular Adenocarcinoma
Invasive Lobular Adenocarcinoma
Classic Invasive Lobular Carcinoma
Invasive Lobular Adenocarcinoma[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
Infiltrating Lobular Breast Carcinoma[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
Invasive Lobular Carcinoma of the Breast[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
Infiltrating Lobular Carcinoma of the Breast
infiltrating lobular carcinoma
Classic Invasive Lobular Carcinoma[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
Infiltrating Lobular Adenocarcinoma[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
Infiltrating Lobular Breast Carcinoma
Invasive Lobular Breast Carcinoma
invasive lobular carcinoma
Invasive Lobular Carcinoma, Classic Type[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
An infiltrating lobular adenocarcinoma. The malignant cells lack cohesion and are arranged individually or in a linear manner (Indian files), or as narrow trabeculae within the stroma. The malignant cells are usually smaller than those of ductal carcinoma, are less pleomorphic, and have fewer mitotic figures.[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
DOID:3460
NCIt:C7950
XAO:0000128
MAT:0000051
James Malone
gaster[accessedResource: BTO:0001307][accessDate: 04-11-2010]
EV:0100070
TGMA:0001041
stomach
A flask-shaped posterior region, which retains the blood meal, and which in culicines is capable of much distension.[accessedResource: TGMA:0001041][accessDate: 04-11-2010]
adult stomach
MA:00000353
A flask-shaped posterior region, which retains the blood meal, and which in culicines is capable of much distension.
BTO:0001307
gaster
Organ with organ cavity which is continuous proximally with the esophagus and distally with the small intestine. Examples: There is only one stomach.
EMAPA:17021
A dilatation of the alimentary canal of a vertebrate communicating anteriorly with the esophagus and posteriorly with the duodenum.
MFO:0003120
EHDAA:2993
SAEL:102
FMAID:7148
adult stomach[accessedResource: TGMA:0001041][accessDate: 04-11-2010]
AAO:0000579
A dilatation of the alimentary canal of a vertebrate communicating anteriorly with the esophagus and posteriorly with the duodenum.[accessedResource: BTO:0001307][accessDate: 04-11-2010]
TADS:0000172
BY5251
James Malone
GeneRIF:12663624
GeneRIF:12004163
GeneRIF:12021142
GeneRIF:12187923
Juvenile Diabetes
GeneRIF:14563018
GeneRIF:12351486
DMI UNSPF NT ST UNCNTRLD[accessedResource: ICD9:250.91][accessDate: 04-11-2010]
GeneRIF:15928253
GeneRIF:11916169
GeneRIF:12479587
Diabetes Mellitus, Type 1
Diabetes mellitus type I [insulin dependent type] [IDDM] [juvenile type], not stated as uncontrolled, with unspecified complication
GeneRIF:11286636
Diabetes mellitus type I [insulin dependent type] [IDDM] [juvenile type], uncontrolled, with unspecified complication[accessedResource: ICD9:250.93][accessDate: 04-11-2010]
Type I Diabetes[accessedResource: NCIt:C2986][accessDate: 04-11-2010]
GeneRIF:12107733
GeneRIF:12185534
GeneRIF:15208781
GeneRIF:12189440
Insulin dependent diabetes mellitus
IDDM[accessedResource: SNOMEDCT:46635009][accessDate: 04-11-2010]
Type 1 Diabetes
GeneRIF:15483661
GeneRIF:12221281
Diabetes mellitus type I [insulin dependent type] [IDDM] [juvenile type], uncontrolled, with unspecified complication
GeneRIF:12200073
GeneRIF:11914751
Type 1 diabetes mellitus[accessedResource: SNOMEDCT:46635009][accessDate: 04-11-2010]
GeneRIF:11975985
Type 1 Diabetes[accessedResource: NCIt:C2986][accessDate: 04-11-2010]
GeneRIF:14614560
GeneRIF:12743700
IDDM
GeneRIF:12457456
James Malone
ICD9:250.93
DMI UNSPF NT ST UNCNTRLD
DMI UNSPF UNCNTRLD[accessedResource: ICD9:250.93][accessDate: 04-11-2010]
GeneRIF:12039523
Juvenile Diabetes[accessedResource: NCIt:C2986][accessDate: 04-11-2010]
DOID:9744
GeneRIF:12083814
GeneRIF:15189740
GeneRIF:12153746
GeneRIF:12622777
Juvenile onset diabetes mellitus[accessedResource: SNOMEDCT:46635009][accessDate: 04-11-2010]
GeneRIF:14557453
NCIt:C2986
Type I Diabetes
Insulin Dependent Diabetes
GeneRIF:16054858
SNOMEDCT:46635009
GeneRIF:12878786
ICD9:250.91
GeneRIF:12021143
Insulin Dependent Diabetes[accessedResource: NCIt:C2986][accessDate: 04-11-2010]
GeneRIF:11981430
GeneRIF:14583186
type I diabetes mellitus
GeneRIF:12874455
Diabetes mellitus characterized by insulin deficiency, sudden onset, severe hyperglycemia, rapid progression to ketoacidosis, and death unless treated with insulin. The disease may occur at any age, but is most common in childhood or adolescence.[accessedResource: NCIt:C2986][accessDate: 04-11-2010]
GeneRIF:12187924
GeneRIF:12351483
GeneRIF:12021138
GeneRIF:14633852
GeneRIF:11916171
GeneRIF:15950078
GeneRIF:12381897
GeneRIF:12118252
Insulin dependent diabetes mellitus[accessedResource: SNOMEDCT:46635009][accessDate: 04-11-2010]
IDDM - Insulin-dependent diabetes mellitus[accessedResource: SNOMEDCT:46635009][accessDate: 04-11-2010]
Diabetes mellitus characterized by insulin deficiency, sudden onset, severe hyperglycemia, rapid progression to ketoacidosis, and death unless treated with insulin. The disease may occur at any age, but is most common in childhood or adolescence.
Juvenile onset diabetes mellitus
GeneRIF:11845233
GeneRIF:12788886
GeneRIF:15786423
Diabetes mellitus type 1 (disorder)
Diabetes mellitus type I [insulin dependent type] [IDDM] [juvenile type], not stated as uncontrolled, with unspecified complication[accessedResource: ICD9:250.91][accessDate: 04-11-2010]
GeneRIF:12951629
GeneRIF:12086959
IDDM - Insulin-dependent diabetes mellitus
DMI UNSPF UNCNTRLD
GeneRIF:11466400
GeneRIF:11943852
GeneRIF:12819903
Diabetes mellitus type 1 (disorder)[accessedResource: SNOMEDCT:46635009][accessDate: 04-11-2010]
GeneRIF:11841494
GeneRIF:14962949
InChI=1/V
vanadio
CHEBI:27698
[V]
James Malone
23V
Vanadium
A vanadium group element that has formula V.
InChIKey=LEONUFNNVUYDNQ-UHFFFAOYAR
vanadium atom
http://www.ebi.ac.uk/efo/EFO_0001635
A vanadium group element atom that has formula V.
MO_476
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#centrifuge
http://www.ebi.ac.uk/efo/EFO_0002013
A centrifuge is an instrument, generally driven by a motor, that puts an object in rotation around a fixed axis, applying force perpendicular to the axis. The centrifuge works using the sedimentation principle, where the centripetal acceleration is used to separate substances of greater and lesser density.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#centrifuge[accessedResource: MO_476][accessDate: 04-11-2010]
centrifuge
James Malone
OE21
James Malone
Ele Holloway
Tomasz Adamusiak
mM
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001806
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mM[accessedResource: MO_509][accessDate: 04-11-2010]
A unit of molarity which is equal to one thousandth of a molar or 10^[-3] M.
MO_509
millimolar
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mM
true
A millimolar is a unit of molarity which is equal to one thousandth of a molar or 10^-3 M.
http://jaxmice.jax.org/strain/009302.html
ILSXISS26/TejJ
Tomasz Adamusiak
Pneumonia (disorder)[accessedResource: DOID:552][accessDate: 04-11-2010]
Pneumonitis
Tomasz Adamusiak
Pneumonia (disorder) [Ambiguous][accessedResource: DOID:552][accessDate: 04-11-2010]
A lung disease that involves lung parenchyma or alveolar inflammation and abnormal alveolar filling with fluid (consolidation and exudation). It results from a variety of causes including infection with bacteria, viruses, fungi or parasites, and chemical or physical injury to the lungs. It is accompanied by fever, chills, cough, and difficulty in breathing.
Pneumonia due to other specified organisms (disorder)[accessedResource: DOID:552][accessDate: 04-11-2010]
pneumonia
Pneumonia NOS
Pneumonia due to other specified organism[accessedResource: DOID:552][accessDate: 04-11-2010]
pneumonia with infectious disease
Pneumonia due to other specified organisms[accessedResource: DOID:552][accessDate: 04-11-2010]
A lung disease that involves lung parenchyma or alveolar inflammation and abnormal alveolar filling with fluid (consolidation and exudation). It results from a variety of causes including infection with bacteria, viruses, fungi or parasites, and chemical or physical injury to the lungs. It is accompanied by fever, chills, cough, and difficulty in breathing.[accessedResource: DOID:552][accessDate: 04-11-2010]
pneumonitis[accessedResource: DOID:552][accessDate: 04-11-2010]
Pneumonia NOS (disorder)
Pneumonia due to other specified organism
pneumonia with infectious disease[accessedResource: DOID:552][accessDate: 04-11-2010]
Pneumonitis (disorder)[accessedResource: DOID:552][accessDate: 04-11-2010]
acute pneumonia
Pneumonia NOS (disorder)[accessedResource: DOID:552][accessDate: 04-11-2010]
chest infection due to pneumonia[accessedResource: DOID:552][accessDate: 04-11-2010]
Pneumonia due to other specified organisms (disorder)
acute pneumonia[accessedResource: DOID:552][accessDate: 04-11-2010]
DOID:552
Pneumonia (disorder)
Pneumonia (disorder) [Ambiguous]
Pneumonitis (disorder)
Pneumonia due to other specified organisms
chest infection due to pneumonia
Pneumonia NOS[accessedResource: DOID:552][accessDate: 04-11-2010]
glitazones
tiazolidinedionas
James Malone
insulin-sensitizing drug
An agent which overcomes insulin resistance by activation of the peroxisome proliferator activated receptor gamma (PPAR-gamma).
thiazolidinediones
glitazone drug
CHEBI:50864
glitazonas
insulin sensitizers
http://www.ebi.ac.uk/efo/EFO_0001839
Ele Holloway
GDM 1
James Malone
GDM1
A cell line derived from a human patient with Philadelphia chromosome negative myeloproliferative disorder, after transformation to acute myelomonoblastic leukemia.http://www.ncbi.nlm.nih.gov/pubmed/6296552
BT483
James Malone
neurointermediate lobe
James Malone
Ele Holloway
HCT-15
HCT15
James Malone
Ele Holloway
stigma
James Malone
The usually apical part of the pistil of a flower which receives the pollen grains and on which they germinate.[accessedResource: BTO:0001303][accessDate: 04-11-2010]
GRO:0005433
The usually apical part of the pistil of a flower which receives the pollen grains and on which they germinate.
GRO:0005433[accessedResource: BTO:0001303][accessDate: 04-11-2010]
MAT:0000524
BTO:0001303
PO:0009073
TAO:0001105
embryo
embryonic structure
animal developmental tissue
Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.
Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[accessedResource: TAO:0001105][accessDate: 04-11-2010]
James Malone
FBbt:00000052
embryo[accessedResource: FBbt:00000052][accessDate: 04-11-2010]
.[accessedResource: FBbt:00000052][accessDate: 04-11-2010]
embryonic structure[accessedResource: TAO:0001105][accessDate: 04-11-2010]
.
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Form the myelin insulation of nervous pathways, guide neuronal migration during development, and exchange metabolites with neurons. Neuroglia have high-affinity transmitter uptake systems, voltage-dependent and transmitter-gated ion channels, and can release transmitters, but their role in signaling (as in many other functions) is unclear.[accessedResource: CL:0000243][accessDate: 10-05-2010]
James Malone
CL:0000243
true
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Form the myelin insulation of nervous pathways, guide neuronal migration during development, and exchange metabolites with neurons. Neuroglia have high-affinity transmitter uptake systems, voltage-dependent and transmitter-gated ion channels, and can release transmitters, but their role in signaling (as in many other functions) is unclear.
use EFO_0000517
obsolete_glial cell (sensu Vertebrata)
1.9
CL:0000099
GABAergic interneuron
Most generally any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region as contrasted with projection neurons which have axons projecting to other brain regions.
Most generally any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region as contrasted with projection neurons which have axons projecting to other brain regions.[accessedResource: CL:0000099][accessDate: 04-11-2010]
interneuron
James Malone
MO_675
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#species_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#species_design[accessedResource: MO_675][accessDate: 04-11-2010]
species design
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158910&type=germplasm
CS57886 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158910&type=germplasm
CS57886
James Malone
ArrayExpress production team
An assay in which a microRNA array is used to analyse the microRNA component of the transcriptome.
microRNA profiling by array
James Malone
C10H17N3O6S
glutathione
5-L-Glutamyl-L-cysteinylglycine
A tripeptide compound consisting of glutamic acid attached via its side chain to the N-terminus of cysteinylglycine.
GSH
Reduced glutathione
N-(N-gamma-L-Glutamyl-L-cysteinyl)glycine
L-gamma-glutamyl-L-cysteinylglycine
NIFSTD:nlx_mol_20090201
N[C@@H](CCC(=O)N[C@@H](CS)C(=O)NCC(O)=O)C(O)=O
InChI=1/C10H17N3O6S/c11-5(10(18)19)1-2-7(14)13-6(4-20)9(17)12-3-8(15)16/h5-6,20H,1-4,11H2,(H,12,17)(H,13,14)(H,15,16)(H,18,19)/t5-,6-/m0/s1/f/h12-13,15,18H
GSH Glutathione is a tripeptide. It contains an unusual peptide linkage between the amine group of cysteine and the carboxyl group of the glutamate side chain. It is an antioxidant that protects cells from toxins such as free radicals.
GSH Glutathione is a tripeptide. It contains an unusual peptide linkage between the amine group of cysteine and the carboxyl group of the glutamate side chain. It is an antioxidant that protects cells from toxins such as free radicals.[accessedResource: NIFSTD:nlx_mol_20090201][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0001547
InChIKey=RWSXRVCMGQZWBV-VSCBVDDUDG
gamma-L-Glutamyl-L-cysteinyl-glycine
Tomasz Adamusiak
true
A derived unit which is a standard measure of physical quantity consisting of only a numerical number without any units.
dimensionless unit
JCRB0819
SBC-5
James Malone
Ele Holloway
https://www.cbil.upenn.edu/RADQuerier/php/sampleInfo.php?assay_id=8649&&study_id=2424
C57Bl/10 derived non-diabetic mouse strain expressing H2g7.
B10.NOD_H2g7
Tomasz Adamusiak
Jie Zheng
large adipocyte
Tomasz Adamusiak
Jie Zheng
A Daudi Burkitt's lymphoma cell line is a cell line.
A Daudi Burkitt's lymphoma cell line is bearer of Daudi Burkitt's lymphoma.
Daudi
Natural Language Generator 8th April 2010
James Malone
Ele Holloway
.
respiratory tract
EMAPA:16727
FMAID:7158
respiratory tract[accessedResource: BTO:0000203][accessDate: 04-11-2010]
AAO:0000541
tracheal system[accessedResource: MAT:0000030][accessDate: 04-11-2010]
Apparatus respiratorius[accessedResource: FMAID:7158][accessDate: 04-11-2010]
XAO:0000117
MA:0000327
TADS:0000043
Respiratory system
Functional system which consists of structures involved in respiration.
.[accessedResource: FBbt:00005024][accessDate: 04-11-2010]
TAO:0000272
James Malone
respiratory system[accessedResource: MAT:0000030][accessDate: 04-11-2010]
EHDAA:2203
Apparatus respiratorius
MFO:0003160
A system of organs subserving the function of respiration and in air-breathing vertebrates consisting typically of the lungs and their nervous and circulatory supply and the channels by which these are continuous with the outer air.[accessedResource: BTO:0000203][accessDate: 04-11-2010]
EV:0100036
tracheal system
SAEL:90
BTO:0000203
MAT:0000030
A system of organs subserving the function of respiration and in air-breathing vertebrates consisting typically of the lungs and their nervous and circulatory supply and the channels by which these are continuous with the outer air.
respiratory system structure
FBbt:00005024
MA:0000717
cardiovascular system endothelium
Tomasz Adamusiak
Jie Zheng
James Malone
NCIt:C13062
BTO:0001713
The back; especially : the entire dorsal surface of an animal.[accessedResource: BTO:0001713][accessDate: 04-11-2010]
dorsum[accessedResource: BTO:0001713][accessDate: 04-11-2010]
dorsum
FMAID:14181
The dorsal area between the base of the neck and the sacrum.
back
Back of body proper
The back; especially : the entire dorsal surface of an animal.
The dorsal area between the base of the neck and the sacrum.[accessedResource: NCIt:C13062][accessDate: 04-11-2010]
Front part of the brain; involved in planning, organizing, problem solving, selective attention, personality and a variety of "higher cognitive functions" including behavior and emotions.[accessedResource: BTO:0000484][accessDate: 04-11-2010]
NIFSTD:nlx_anat_20090601
Tomasz Adamusiak
Frontal region
frontal lobe
frontal cortex
Frontal lobe is the anterior-most of five lobes of the cerebral hemisphere. It is bounded by the central sulcus on its posterior border and by the longitudinal cerebral fissure on its medial border.
Frontal cortex[accessedResource: NIFSTD:nlx_anat_20090601][accessDate: 04-11-2010]
Anterior portion of the frontal cortex, lying anterior to the central sulcus in humans. It is bounded by the parietal cortex posteriorly and the temporal cortex laterally.[accessedResource: NIFSTD:nlx_anat_20090601][accessDate: 04-11-2010]
higher cognitive functions
MAT:0000505
BTO:0000484
Frontal region[accessedResource: FMAID:61824][accessDate: 04-11-2010]
Anterior portion of the frontal cortex, lying anterior to the central sulcus in humans. It is bounded by the parietal cortex posteriorly and the temporal cortex laterally.
James Malone
FMAID:61824
EV:0100167
NIFSTD:birnlex_928
fibroma
Jie Zheng
James Malone
organization
An organization is a continuant entity which can play roles, has members, and has a set of organization rules. Members of organizations are either organizations themselves or individual people. Members can bear specific organization member roles that are determined in the organization rules. The organization rules also determine how decisions are made on behalf of the organization by the organization members.
MO_177
organisation
http://www.ebi.ac.uk/efo/EFO_0002010
Tomasz Adamusiak
http://www.cbil.upenn.edu/RAD/DGAP/php/displayStudy.php?study_id=2340&&download=1#study2340
Mouse strain with deficiency of the leptin gene (ObOb).
ObOb
Tomasz Adamusiak
Jie Zheng
BC-5
James Malone
Ele Holloway
Ele Holloway
Pituitary adenoma, no ICD-O subtype (morphologic abnormality)
Pituitary adenoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:3829][accessDate: 04-11-2010]
pituitary adenoma
DOID:3829
Tomasz Adamusiak
Pituitary adenoma - disorder[accessedResource: DOID:3829][accessDate: 04-11-2010]
adenoma of the Pituitary gland
adenoma of the Pituitary gland[accessedResource: DOID:3829][accessDate: 04-11-2010]
Pituitary adenoma (disorder)
AsPC1
James Malone
Ele Holloway
A male organ of copulation that in male mammals including humans usually functions as the channel by which urine leaves the body.[accessedResource: BTO:0000405][accessDate: 04-11-2010]
phallus[accessedResource: FBbt:00004852][accessDate: 04-11-2010]
A male organ of copulation that in male mammals including humans usually functions as the channel by which urine leaves the body.
phallus
Distal part of the aedeagus consisting of a median, scleratised, pointed lobe through which the ejaculatory duct discharges.
Distal part of the aedeagus consisting of a median, scleratised, pointed lobe through which the ejaculatory duct discharges.[accessedResource: FBbt:00004852][accessDate: 04-11-2010]
FBbt:00004852
EMAPA:18682
MA:0000408
MAT:0000186
BTO:0000405
penis
EHDAA:9380
FMAID:9707
James Malone
EV:0100107
SAEL:80
James Malone
BTO:0000575
hepatocyte
CL:0000182
A liver cell.[accessedResource: BTO:0000575][accessDate: 04-11-2010]
A liver cell.
The main structural component of the liver. They are specialized epithelial cells that are organized into interconnected plates called lobules. Majority of cell population of liver, polygonal in shape, arranged in plates or trabeculae between sinusoids; may have single nucleus or binucleated.[accessedResource: CL:0000182][accessDate: 04-11-2010]
The main structural component of the liver. They are specialized epithelial cells that are organized into interconnected plates called lobules. Majority of cell population of liver, polygonal in shape, arranged in plates or trabeculae between sinusoids; may have single nucleus or binucleated.
The main structural component of the liver. They are specialized epithelial cells that are organized into interconnected plates called lobules.
Clear Cell Renal Cell Carcinoma
Hypernephroma
Grawitz Tumor
Clear Cell Adenocarcinoma of Kidney[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
James Malone
DOID:4467
Clear cell carcinoma of kidney (disorder)[accessedResource: DOID:4467][accessDate: 04-11-2010]
Clear Cell Adenocarcinoma of Kidney
Kidney Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
conventional (Clear cell) renal cell carcinoma[accessedResource: DOID:4467][accessDate: 04-11-2010]
Clear Cell Renal Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
NCIt:C4033
conventional renal cell carcinoma[accessedResource: DOID:4467][accessDate: 04-11-2010]
GeneRIF:15062033
GeneRIF:15709172
Kidney Clear Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
Kidney Clear Cell Adenocarcinoma
Clear Cell Carcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
Renal Clear Cell Adenocarcinoma
Conventional (Clear Cell) Renal Cell Adenocarcinoma
conventional (Clear cell) renal cell carcinoma
Clear Cell Adenocarcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
Kidney Clear Cell Carcinoma
Clear Cell Carcinoma of Kidney[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.[accessedResource: DOID:4467][accessDate: 04-11-2010]
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
Clear cell carcinoma of kidney is a renal cell carcinoma described as the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
Grawitz Tumor[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
clear cell renal carcinoma
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.
Hypernephroma[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
Conventional (Clear Cell) Renal Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
Conventional Renal Cell Carcinoma
GeneRIF:12576453
GeneRIF:14550470
Clear cell carcinoma of kidney (disorder)
Clear Cell Carcinoma of the Kidney
Renal Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
Clear Cell Adenocarcinoma of the Kidney
clear cell carcinoma of kidney
Chondromyxoid fibroma (morphologic abnormality)[accessedResource: DOID:2694][accessDate: 04-11-2010]
DOID:2694
CMF - Chondromyxoid fibroma
CMF - Chondromyxoid fibroma[accessedResource: SNOMEDCT:39553005][accessDate: 04-11-2010]
James Malone
SNOMEDCT:39553005
Chondromyxoid fibroma (morphologic abnormality)
chondromyxoid fibroma
An uncommon benign neoplasm arising from the bone. It is characterized by the presence of spindle-shaped or stellate chondrocytes, a lobulated growth pattern, myxoid stroma formation, and sometimes multinucleated giant cells. It has been associated with chromosomal rearrangement of 6q13 and 6q25 bands. The most common clinical symptom is mild, localized pain.[accessedResource: NCIt:C3830][accessDate: 04-11-2010]
An uncommon benign neoplasm arising from the bone. It is characterized by the presence of spindle-shaped or stellate chondrocytes, a lobulated growth pattern, myxoid stroma formation, and sometimes multinucleated giant cells. It has been associated with chromosomal rearrangement of 6q13 and 6q25 bands. The most common clinical symptom is mild, localized pain.
NCIt:C3830
InChI=1/Fe
InChIKey=XEEYBQQBJWHFJM-UHFFFAOYAG
http://www.ebi.ac.uk/efo/EFO_0002410
ferrum
[Fe]
CHEBI:18248
James Malone
An iron group element that has formula Fe.
fer
Eisen
iron atom
Ele Holloway
An iron group element atom that has formula Fe.
26Fe
iron
hierro
characterization of functional areas of human genome
Tha HapMap Project webpage <http://hapmap.ncbi.nlm.nih.gov>
The International HapMap Project is a partnership of scientists and funding agencies from Canada, China, Japan, Nigeria, the United Kingdom and the United States to develop a public resource that will help researchers find genes associated with human disease and response to pharmaceuticals.
The International HapMap Project
James Malone
James Malone
Chondromatous giant cell tumor
A usually benign tumor composed of cells which arise from chondroblasts or their precursors and which tend to differentiate into cartilage cells. It occurs primarily in the epiphyses of adolescents. It is relatively rare and represents less than 2% of all primary bone tumors. The peak incidence is in the second decade of life; it is about twice as common in males as in females. (From Dorland, 27th ed; Holland et al., Cancer Medicine, 3d ed, p1846)[accessedResource: MSH:D002804][accessDate: 04-11-2010]
Codman's tumour
Chondroblastoma (morphologic abnormality)
Chondroblastoma, NOS
SNOMEDCT:189887007
[M]Chondroblastoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189887007][accessDate: 04-11-2010]
A benign, lytic neoplasm usually arising from the cartilage in epiphysis and metaphysis of bone. It is a well circumscribed tumor characterized by the presence of chondroblasts, osteoclast-like giant cells, myxoid stroma formation, calcification, and mitotic activity. In aggressive cases, there is rearrangement of the 8q21 chromosome band. The tumor occurs most frequently in children and young adults.[accessedResource: NCIt:C2945][accessDate: 04-11-2010]
MSH:D002804
DOID:2649
Chondroblastomas[accessedResource: MSH:D002804][accessDate: 04-11-2010]
chondroblastoma
Codman's tumor
Chondroblastomas
Chondroblastoma, NOS[accessedResource: SNOMEDCT:9001003][accessDate: 04-11-2010]
NCIt:C2945
A usually benign tumor composed of cells which arise from chondroblasts or their precursors and which tend to differentiate into cartilage cells. It occurs primarily in the epiphyses of adolescents. It is relatively rare and represents less than 2% of all primary bone tumors. The peak incidence is in the second decade of life; it is about twice as common in males as in females. (From Dorland, 27th ed; Holland et al., Cancer Medicine, 3d ed, p1846)
[M]Chondroblastoma NOS
Chondromatous giant cell tumour
[M]Chondroblastoma NOS[accessedResource: SNOMEDCT:189887007][accessDate: 04-11-2010]
Chondroblastoma NOS (morphologic abnormality)[accessedResource: DOID:2649][accessDate: 04-11-2010]
Chondroblastoma of bone[accessedResource: DOID:2649][accessDate: 04-11-2010]
Chondroblastoma (morphologic abnormality)[accessedResource: DOID:2649][accessDate: 04-11-2010]
Chondromatous giant cell tumour[accessedResource: SNOMEDCT:9001003][accessDate: 04-11-2010]
Chondroblastoma NOS (morphologic abnormality)
Codman's tumor[accessedResource: SNOMEDCT:9001003][accessDate: 04-11-2010]
GeneRIF:13680221
[M]Chondroblastoma NOS (morphologic abnormality)
A benign, lytic neoplasm usually arising from the cartilage in epiphysis and metaphysis of bone. It is a well circumscribed tumor characterized by the presence of chondroblasts, osteoclast-like giant cells, myxoid stroma formation, calcification, and mitotic activity. In aggressive cases, there is rearrangement of the 8q21 chromosome band. The tumor occurs most frequently in children and young adults.
Chondromatous giant cell tumor[accessedResource: SNOMEDCT:9001003][accessDate: 04-11-2010]
Chondroblastoma morphology
SNOMEDCT:9001003
Chondroblastoma morphology[accessedResource: SNOMEDCT:9001003][accessDate: 04-11-2010]
Chondroblastoma of bone
Codman's tumour[accessedResource: SNOMEDCT:9001003][accessDate: 04-11-2010]
RAW264.7
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158572&type=germplasm
CS57548 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158572&type=germplasm
CS57548
James Malone
A lateral outgrowth from a plant stem that is typically a flattened expanded variably shaped greenish organ, constitutes a unit of the foliage, and functions primarily in food manufacture by photosynthesis.[accessedResource: BTO:0000713][accessDate: 10-05-2010]
1.8
leaf of a moss or liverwort[accessedResource: MAT:0000276][accessDate: 10-05-2010]
obsolete_phyllid
BTO:0000713
GRO:0005306[accessedResource: BTO:0000713][accessDate: 10-05-2010]
A lateral outgrowth from a plant stem that is typically a flattened expanded variably shaped greenish organ, constitutes a unit of the foliage, and functions primarily in food manufacture by photosynthesis.
MAT:0000276
James Malone
leaf of a moss or liverwort
true
leaf[accessedResource: BTO:0000713][accessDate: 10-05-2010]
GRO:0005306
leaf
duplication
Either of a pair of glandular pouches that lie one on either side of the male reproductive tract and in the human male secrete a sugar- and protein-containing fluid into the ejaculatory duct.[accessedResource: BTO:0001234][accessDate: 04-11-2010]
glandula seminalis[accessedResource: BTO:0001234][accessDate: 04-11-2010]
EV:0100106
MAT:0000171
Either of a pair of glandular pouches that lie one on either side of the male reproductive tract and in the human male secrete a sugar- and protein-containing fluid into the ejaculatory duct.
James Malone
glandula seminalis
vas efferens
seminal vesicle
FBbt:00004958
BTO:0001234
seminal gland[accessedResource: BTO:0001234][accessDate: 04-11-2010]
glandula vesiculosa[accessedResource: BTO:0001234][accessDate: 04-11-2010]
vesicula seminalis[accessedResource: BTO:0001234][accessDate: 04-11-2010]
vesicula seminalis
glandula vesiculosa
FMAID:19386
seminal gland
vas efferens[accessedResource: FBbt:00004958][accessDate: 04-11-2010]
HT-3
HT3
James Malone
Ele Holloway
true
UO:0000046
http://www.ebi.ac.uk/efo/EFO_0001692
A unit which is derived from base units.
A derived unit is a unit which is derived from base units.
derived unit
James Malone
NCIt:C33223
organ of corti
The organ, resting on the basilar membrane in the cochlear duct, that contains the special sensory receptors for hearing; it consists of neuroepithelial hair cells and several types of supporting cells, including the inner and outer pillar cells, inner and outer phalangeal cells, border cells, and Hensen's cells.
Spiral Organ of Corti[accessedResource: NCIt:C33223][accessDate: 04-11-2010]
basilar papilla
BTO:0001691
Corti's organ
James Malone
organum spirale[accessedResource: BTO:0001691][accessDate: 04-11-2010]
spiral organ[accessedResource: BTO:0001691][accessDate: 04-11-2010]
Spiral Organ of Corti
basilar papilla[accessedResource: BTO:0001691][accessDate: 04-11-2010]
organum spirale
spiral organ
Corti's organ[accessedResource: BTO:0001691][accessDate: 04-11-2010]
The organ, resting on the basilar membrane in the cochlear duct, that contains the special sensory receptors for hearing; it consists of neuroepithelial hair cells and several types of supporting cells, including the inner and outer pillar cells, inner and outer phalangeal cells, border cells, and Hensen's cells.[accessedResource: BTO:0001691][accessDate: 04-11-2010]
http://en.wikipedia.org/wiki/Chip-Sequencing
Helen Parkinson
ChIP-seq is an assay in which chromatin immunoprecipitation with high throughput sequencing is used to identify the cistrome of DNA-associated proteins.
ChIP-seq
EV:0300070
adult
adult stage[accessedResource: MAT:0000403][accessDate: 04-11-2010]
OntologyMappingImporter following MAT:0000403
WBIs:0000041
NIFSTD:birnlex_681
MAT:0000403
James Malone
EVM:2990028
Tomasz Adamusiak
adult stage
XAO:1000009
NIFSTD:birnlex_228
A maturity quality inhering in an individual by virtue of the individual having attained sexual maturity and full growth
A maturity quality inhering in an individual by virtue of the individual having attained sexual maturity and full growth[accessedResource: NIFSTD:birnlex_681][accessDate: 04-11-2010]
FBdv:00005369
male genital system
male genitalia[accessedResource: MAT:0000029][accessDate: 04-11-2010]
male genitalia
MA:0000396
Gonochoristic organism that can produce male gametes.
The reproductive system in men includes the prostate, the testes, and the penis.[accessedResource: BTO:0000082][accessDate: 04-11-2010]
FMAID:45664
EMAPA:17968
TADS:0000460
XAO:0000155
EV:0100101
male
male reproductive system
Gonochoristic organism that can produce male gametes.[accessedResource: ZFA:0000242][accessDate: 04-11-2010]
BTO:0000082
EHDAA:8136
ZFA:0000242
MAT:0000029
male genital system[accessedResource: MAT:0000029][accessDate: 04-11-2010]
WBbt:0005574
male[accessedResource: MAT:0000029][accessDate: 04-11-2010]
male organism[accessedResource: ZFA:0000242][accessDate: 04-11-2010]
The reproductive system in men includes the prostate, the testes, and the penis.
male organism
James Malone
http://jaxmice.jax.org/strain/009261.html
ILSXISS14/TejJ
Tomasz Adamusiak
MO_588
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#growth_condition_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#growth_condition_design[accessedResource: MO_588][accessDate: 04-11-2010]
growth condition design
Tomasz Adamusiak
precursor B-cell
Tomasz Adamusiak
A precursor B cell is a B cell with the phenotype CD10-positive (P08473/NEP_HUMAN; PIRSF001194).
precursor B cell[accessedResource: CL:0000817][accessDate: 04-11-2010]
pre-B cell
James Malone
A precursor B cell is a B cell with the phenotype CD10-positive.[accessedResource: CL:0000817][accessDate: 04-11-2010]
T-cell neoplasm
CL:0000817
neoplasm of immature B and T cells
A precursor B cell is a B cell with the phenotype CD10-positive.
pre-B cell[accessedResource: CL:0000817][accessDate: 04-11-2010]
Skin cell, of the keratinized layer of epidermis: its characteristic intermediate filament protein is cytokeratin.[accessedResource: BTO:0000667][accessDate: 04-11-2010]
An epidermal cell which synthesizes keratin and undergoes a characteristic change as it moves upward from the basal layers of the epidermis to the cornified (horny) layer of the skin. Successive stages of differentiation of the keratinocytes forming the epidermal layers are basal cell, spinous or prickle cell, and the granular cell.
James Malone
An epidermal cell which synthesizes keratin and undergoes a characteristic change as it moves upward from the basal layers of the epidermis to the cornified (horny) layer of the skin. Successive stages of differentiation of the keratinocytes forming the epidermal layers are basal cell, spinous or prickle cell, and the granular cell.[accessedResource: CL:0000312][accessDate: 04-11-2010]
Skin cell, of the keratinized layer of epidermis: its characteristic intermediate filament protein is cytokeratin.
CL:0000312
malpighian cell[accessedResource: CL:0000312][accessDate: 04-11-2010]
malpighian cell
keratinocyte
BTO:0000667
Drug resistance to insulin (disorder)
Drug resistance to insulin (disorder)[accessedResource: DOID:2017][accessDate: 04-11-2010]
diminished effectiveness of insulin in lowering plasma glucose levels
insulin resistance
DOID:2017
HP:0000855
MP:0005331
Tomasz Adamusiak
Ele Holloway
diminished effectiveness of insulin in lowering plasma glucose levels[accessedResource: MP:0005331][accessDate: 04-11-2010]
BTO:0000212
A centrally-located portion of the brain affected by Huntington's Disease. The putamen is structurally similar to the caudate nucleus together with which it composes what is termed the striatum.
A centrally-located portion of the brain affected by Huntington's Disease. The putamen is structurally similar to the caudate nucleus together with which it composes what is termed the striatum.[accessedResource: BTO:0000212][accessDate: 04-11-2010]
caudate putamen
James Malone
ACC Stage C
symptomatic heart failure
Tomasz Adamusiak
dendritic cell-derived osteoclast
A human embryonal carcinoma (EC) stem cell line used as a model system for the study of neuronal differentiation and differentiated into neuronal like cells
NTera2 derived dopaminergic neuronal like cells
N-(3-chloro-4-((3-fluorophenyl)methoxy)phenyl)-6-(5-(((2-(methylsulfonyl)ethyl)amino)methyl)-2-furanyl)-4-quinazolinamine
N-[3-chloro-4-(3-fluorobenzyloxy)phenyl]-6-[5-({[2-(methanesulfonyl)ethyl]amino}methyl)furan-2-yl]quinazolin-4-amine
N-{3-CHLORO-4-[(3-FLUOROBENZYL)OXY]PHENYL}-6-[5-({[2-(METHYLSULFONYL)ETHYL]AMINO}METHYL)-2-FURYL]-4-QUINAZOLINAMINE
C29H26ClFN4O4S
http://www.ebi.ac.uk/efo/EFO_0001562
lapatinib
CS(=O)(=O)CCNCc1ccc(o1)-c1ccc2ncnc(Nc3ccc(OCc4cccc(F)c4)c(Cl)c3)c2c1
A quinazoline that has formula C29H26ClFN4O4S.
CHEBI:49603
GW 572016
InChIKey=BCFGMOOMADDAQU-CSKMVECVCB
Tykerb
InChI=1/C29H26ClFN4O4S/c1-40(36,37)12-11-32-16-23-7-10-27(39-23)20-5-8-26-24(14-20)29(34-18-33-26)35-22-6-9-28(25(30)15-22)38-17-19-3-2-4-21(31)13-19/h2-10,13-15,18,32H,11-12,16-17H2,1H3,(H,33,34,35)/f/h35H
An organochlorine acaricide that has formula C9H11Cl3NO3PS.
o,o-Diethyl-o-(3,5,6-trichloro-2-pyridyl)phosphorothioate
C9H11Cl3NO3PS
CCOP(=S)(OCC)Oc1nc(Cl)c(Cl)cc1Cl
James Malone
Chlorpyrifos-ethyl
chlorpyrifos
O,O-diethyl O-(3,5,6-trichloropyridin-2-yl) phosphorothioate
Trichlorpyrphos
O,O-diethyl O-(3,5,6-trichloropyridin-2-yl) thiophosphate
Phosphorothioic acid, O,O-diethyl O-(3,5,6-trichloro-2-pyridinyl) ester
Chlorpyriphos
m-Chlorpyrifos
InChI=1/C9H11Cl3NO3PS/c1-3-14-17(18,15-4-2)16-9-7(11)5-6(10)8(12)13-9/h5H,3-4H2,1-2H3
CHEBI:34631
InChIKey=SBPBAQFWLVIOKP-UHFFFAOYAG
http://www.ebi.ac.uk/efo/EFO_0001504
CL:0000477
follicle cell
James Malone
Miliary lupoid of Boeck[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
Boecks Disease
GeneRIF:14597055
Syndrome, Schaumann[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Boeck Sarcoid[accessedResource: MSH:D012507][accessDate: 04-11-2010]
An idiopathic inflammatory disorder characterized by the formation of non-necrotizing epithelioid granulomas which contain giant cells. It usually affects the lungs, lymph nodes, liver, and skin.
GeneRIF:15332393
SCHAUMANN DIS[accessedResource: MSH:D012507][accessDate: 04-11-2010]
GeneRIF:12091241
Schaumann's Syndromes[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Sarcoidoses
GeneRIF:14601651
DOID:11335
An idiopathic systemic inflammatory granulomatous disorder comprised of epithelioid and multinucleated giant cells with little necrosis. It usually invades the lungs with fibrosis and may also involve lymph nodes, skin, liver, spleen, eyes, phalangeal bones, and parotid glands.
Miliary lupoid of Boeck
Schaumann's Syndrome[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Boeck Sarcoid, any site
Uveoparotid fever[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
Lupus pernio of Besnier[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
GeneRIF:16053028
SCHAUMANN DIS
Sarcoidosis (disorder)
Schaumann's Syndromes
GeneRIF:12180727
Besnier-Boeck-Schaumann Syndrome[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Uveoparotid fever
Boeck's Sarcoid
Boeck's Disease[accessedResource: MSH:D012507][accessDate: 04-11-2010]
GeneRIF:15459013
GeneRIF:14551164
lymphogranulomatosis[accessedResource: DOID:11335][accessDate: 04-11-2010]
GeneRIF:15750046
GeneRIF:15004750
GeneRIF:12366781
Schaumann Syndrome
Boeck's sarcoidosis
GeneRIF:16236915
Benign lymphogranulomatosis of Schaumann[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
GeneRIF:12047365
Sarcoidosis, NOS
Boecks sarcoidosis[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
James Malone
Besnier-Boeck Disease
Syndrome, Besnier-Boeck-Schaumann
Darier-Roussy sarcoid
Boeck's sarcoid[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
Sarcoidoses[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Benign lymphogranulomatosis of Schaumann
Boeck Sarcoid
Boeck Disease
BESNIER BOECK DIS[accessedResource: MSH:D012507][accessDate: 04-11-2010]
An idiopathic inflammatory disorder characterized by the formation of non-necrotizing epithelioid granulomas which contain giant cells. It usually affects the lungs, lymph nodes, liver, and skin.[accessedResource: NCIt:C34995][accessDate: 04-11-2010]
Syndrome, Schaumann's
Boeck Sarcoid, any site[accessedResource: DOID:11335][accessDate: 04-11-2010]
Darier-Roussy sarcoid[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
Disease, Schaumann
GeneRIF:15019280
GeneRIF:15083893
GeneRIF:15702130
GeneRIF:15713215
GeneRIF:16053025
sarcoidosis
MSH:D012507
GeneRIF:12068984
GeneRIF:12413001
GeneRIF:15942292
NCIt:C34995
SNOMEDCT:31541009
Besnier-Boeck Disease[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Boecks Disease[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Disease, Schaumann[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Lupus pernio of Besnier
BESNIER BOECK DIS
lymphogranulomatosis
Boeck's Disease
GeneRIF:15976369
An idiopathic systemic inflammatory granulomatous disorder comprised of epithelioid and multinucleated giant cells with little necrosis. It usually invades the lungs with fibrosis and may also involve lymph nodes, skin, liver, spleen, eyes, phalangeal bones, and parotid glands.[accessedResource: MSH:D012507][accessDate: 04-11-2010]
GeneRIF:14508706
GeneRIF:15735647
ICD9:135
Sarcoidosis (disorder)[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
Boeck Disease[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Sarcoidosis, NOS[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
GeneRIF:12039524
Ele Holloway
KPL1
James Malone
An assay with input protein
protein assay
James Malone
H125
NCI-H125
N(6),2'-O-dibutyryl cAMP
N(6),O(2')-dibutyryl adenosine 3',5'-cyclic monophosphate
InChI=1/C18H24N5O8P/c1-3-5-11(24)22-16-13-17(20-8-19-16)23(9-21-13)18-15(30-12(25)6-4-2)14-10(29-18)7-28-32(26,27)31-14/h8-10,14-15,18H,3-7H2,1-2H3,(H,26,27)(H,19,20,22,24)/t10-,14-,15-,18-/m1/s1/f/h22,26H
N(6),2'-O-dibutyryl cyclic AMP
bucladesine
N(6),O(2')-dibutyryladenosine 3',5'-monophosphate
dibutyryladenosine cyclic monophosphate
CCCC(=O)Nc1ncnc2n(cnc12)[C@@H]1O[C@@H]2COP(O)(=O)O[C@H]2[C@H]1OC(=O)CCC
dibutyryl cyclic AMP
dibutyryl cyclic 3',5'-adenylic acid
N(6),O(2')-dibutyryl-3',5'-cyclic AMP
bucladesinum
dibutyryl-3',5'-AMP
dibutyryl adenosine 3',5'-monophosphate
CHEBI:50095
dibutyryl cAMP
dibutyryl cyclic adenosine 3',5'-monophosphate
http://www.ebi.ac.uk/efo/EFO_0001495
C18H24N5O8P
3',5'-cyclic AMP dibutyrate
bucladesina
dibutyryladenosine 3',5'-cyclic monophosphate
InChIKey=CJGYSWNGNKCJSB-NOICQAOIDM
dibutyryl adenosine 3',5'-cyclic phosphate
6-N-butanoyl-2'-O-butanoyladenosine 3',5'-(hydrogen phosphate)
dibutyryl 3',5'-cyclic AMP
CORL-23
CORL23
James Malone
Ele Holloway
Hemorrhage, Intracranial Subarachnoid
GeneRIF:15381648
Hemorrhages, Aneurysmal Subarachnoid[accessedResource: MSH:D013345][accessDate: 04-11-2010]
Hemorrhages, Subarachnoid[accessedResource: MSH:D013345][accessDate: 04-11-2010]
DOID:11236
Spontaneous Subarachnoid Hemorrhages
Subarachnoid Hemorrhages, Intracranial[accessedResource: MSH:D013345][accessDate: 04-11-2010]
Subarachnoid hemorrhage NOS
Subarachnoid Hemorrhages, Aneurysmal
GeneRIF:15091109
Subarachnoid hemorrhage (disorder)
Subarachnoid haemorrhage NOS[accessedResource: SNOMEDCT:195162008][accessDate: 04-11-2010]
SAH - Subarachnoid haemorrhage
Spontaneous Subarachnoid Hemorrhage
SAH - Subarachnoid hemorrhage[accessedResource: SNOMEDCT:21454007][accessDate: 04-11-2010]
Subarachnoid haemorrhage
ICD9:430
Subarachnoid haemorrhage NOS
James Malone
Subarachnoid hemorrhage (disorder)[accessedResource: SNOMEDCT:21454007][accessDate: 04-11-2010]
MSH:D013345
Hemorrhages, Perinatal Subarachnoid[accessedResource: MSH:D013345][accessDate: 04-11-2010]
SNOMEDCT:195162008
GeneRIF:15665056
SAHs (Subarachnoid Hemorrhage)[accessedResource: MSH:D013345][accessDate: 04-11-2010]
GeneRIF:14753493
GeneRIF:15947258
Subarachnoid hemorrhage NOS (disorder)[accessedResource: DOID:11236][accessDate: 04-11-2010]
Aneurysmal Subarachnoid Hemorrhage[accessedResource: MSH:D013345][accessDate: 04-11-2010]
Subarachnoid Hemorrhage, Spontaneous[accessedResource: MSH:D013345][accessDate: 04-11-2010]
Hemorrhages, Subarachnoid
SAHs (Subarachnoid Hemorrhage)
SNOMEDCT:21454007
GeneRIF:15297630
Perinatal Subarachnoid Hemorrhage[accessedResource: MSH:D013345][accessDate: 04-11-2010]
GeneRIF:15331787
GeneRIF:15947264
Bleeding into the intracranial or spinal SUBARACHNOID SPACE, most resulting from INTRACRANIAL ANEURYSM rupture. It can occur after traumatic injuries (SUBARACHNOID HEMORRHAGE, TRAUMATIC). Clinical features include HEADACHE; NAUSEA; VOMITING, nuchal rigidity, variable neurological deficits and reduced mental status.[accessedResource: MSH:D013345][accessDate: 04-11-2010]
SAH - Subarachnoid hemorrhage
Subarachnoid Hemorrhages, Spontaneous[accessedResource: MSH:D013345][accessDate: 04-11-2010]
Hemorrhages, Perinatal Subarachnoid
Subarachnoid hemorrhage NOS[accessedResource: SNOMEDCT:195162008][accessDate: 04-11-2010]
GeneRIF:12677022
Perinatal Subarachnoid Hemorrhage
Subarachnoid haemorrhage[accessedResource: SNOMEDCT:21454007][accessDate: 04-11-2010]
Subarachnoid hemorrhage NOS (disorder)
Hemorrhages, Intracranial Subarachnoid
SAH - Subarachnoid haemorrhage[accessedResource: SNOMEDCT:21454007][accessDate: 04-11-2010]
Aneurysmal Subarachnoid Hemorrhage
subarachnoid hemorrhage
Subarachnoid Hemorrhage, Intracranial[accessedResource: MSH:D013345][accessDate: 04-11-2010]
Bleeding into the intracranial or spinal SUBARACHNOID SPACE, most resulting from INTRACRANIAL ANEURYSM rupture. It can occur after traumatic injuries (SUBARACHNOID HEMORRHAGE, TRAUMATIC). Clinical features include HEADACHE; NAUSEA; VOMITING, nuchal rigidity, variable neurological deficits and reduced mental status.
MSH:D011470
Prostatic area hypertrophy[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
GeneRIF:12111704
GeneRIF:12595443
GeneRIF:15129425
Benign fibroma of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
Enlarged prostate - benign[accessedResource: DOID:11131][accessDate: 04-11-2010]
James Malone
NCIt:C2897
GeneRIF:14678983
benign prostatic hypertrophy
GeneRIF:12530058
Benign enlargement of prostate, NOS
GeneRIF:15314639
Glandular, stromal and muscular hyperplasia of prostate gland[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
Fibromuscular hyperplasia of prostate gland[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
Prostatauxe[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
Adenoma, Prostatic[accessedResource: MSH:D011470][accessDate: 04-11-2010]
SNOMEDCT:367483003
Adenomyomatous hyperplasia of prostate gland
GeneRIF:15599946
Benign myoma of prostate
ICD9:600.0
BPH[accessedResource: NCIt:C2897][accessDate: 04-11-2010]
Benign Hyperplasia of Prostate[accessedResource: NCIt:C2897][accessDate: 04-11-2010]
Benign Prostatic Hyperplasia - BPH[accessedResource: NCIt:C2897][accessDate: 04-11-2010]
Lobular hyperplasia of prostate gland
GeneRIF:15515049
Hyperplasia of prostate
Hypertrophy (benign) of prostate
Prostatic hyper -benign
Benign Hyperplasia of the Prostate[accessedResource: NCIt:C2897][accessDate: 04-11-2010]
Glandular, stromal AND/OR muscular hyperplasia of prostate gland
Prostatic hypertrophy
Adenofibromatous hypertrophy of prostate, NOS[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
Benign adenoma of prostate
Prostatic area hypertrophy
Hyperplasia of prostate, NOS
GeneRIF:15999119
Benign fibroma of prostate
BPH - Benign prostatic hypertrophy[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
GeneRIF:15178433
Benign prostatic hyperplasia (disorder)
Glandular, stromal and muscular hyperplasia of prostate gland
benign hypertrophy of prostate NOS
BEP - Benign enlargement of prostate
Prostatic Adenomas
Benign Prostate Hyperplasia
Benign Prostate Hyperplasia[accessedResource: NCIt:C2897][accessDate: 04-11-2010]
GeneRIF:16114059
GeneRIF:12552318
Benign prostatic hyperplasia, NOS
BPH
GeneRIF:15492805
SNOMEDCT:266569009
GeneRIF:12111701
Increase in constituent cells in the PROSTATE, leading to enlargement of the organ (hypertrophy) and adverse impact on the lower urinary tract function. This can be caused by increased rate of cell proliferation, reduced rate of cell death, or both.[accessedResource: MSH:D011470][accessDate: 04-11-2010]
Prostatic Adenoma
Fibromuscular hyperplasia of prostate gland
Prostatic hypertrophy[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
BEP - Benign enlargement of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
benign hypertrophy of prostate NOS[accessedResource: DOID:11131][accessDate: 04-11-2010]
Hyperplasia of prostate, NOS[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
Hyperplasia of prostate (disorder)[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
GeneRIF:15611997
benign prostatic hyperplasia (disorder)[accessedResource: DOID:11131][accessDate: 04-11-2010]
GeneRIF:12142541
GeneRIF:14604900
Enlarged prostate - benign
A disease caused by hyperplastic process of non-transformed prostatic cells.
Adenomyomatous hyperplasia of prostate gland[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
GeneRIF:12399530
Benign enlargement of prostate
Benign adenoma of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
A non-cancerous nodular enlargement of the prostate gland. It is characterized by the presence of epithelial cell nodules, and stromal nodules containing fibrous and smooth muscle elements. It is the most common urologic disorder in men, causing blockage of urine flow.
Glandular, stromal AND/OR muscular hyperplasia of prostate gland[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
benign prostatic hyperplasia, NOS[accessedResource: DOID:11131][accessDate: 04-11-2010]
Prostatic hyper -benign[accessedResource: DOID:11131][accessDate: 04-11-2010]
A non-cancerous nodular enlargement of the prostate gland. It is characterized by the presence of epithelial cell nodules, and stromal nodules containing fibrous and smooth muscle elements. It is the most common urologic disorder in men, causing blockage of urine flow.[accessedResource: NCIt:C2897][accessDate: 04-11-2010]
GeneRIF:12771801
GeneRIF:11550212
Benign Prostatic Hypertrophy[accessedResource: MSH:D011470][accessDate: 04-11-2010]
Adenomas, Prostatic[accessedResource: MSH:D011470][accessDate: 04-11-2010]
Adenofibromatous hypertrophy of prostate, NOS
benign prostatic hyperplasia
Benign enlargement of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
Adenofibromatous hypertrophy of prostate[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
GeneRIF:15678497
GeneRIF:12673556
GeneRIF:15621731
Hyperplasia, Prostatic
Benign Hyperplasia of the Prostate
Benign enlargement of prostate, NOS[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
Increase in constituent cells in the PROSTATE, leading to enlargement of the organ (hypertrophy) and adverse impact on the lower urinary tract function. This can be caused by increased rate of cell proliferation, reduced rate of cell death, or both.
Benign myoma of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
Benign Prostatic Hyperplasia - BPH
Nodular hyperplasia of prostate gland[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
Benign Hyperplasia of Prostate
BPH - Benign prostatic hypertrophy
Prostatauxe
Lobular hyperplasia of prostate gland[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
GeneRIF:15083213
Hyperplasia of prostate (disorder)
DOID:11131
Hyperplasia, Prostatic[accessedResource: MSH:D011470][accessDate: 04-11-2010]
Hyperplasia of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
A disease caused by hyperplastic process of non-transformed prostatic cells.[accessedResource: MSH:D011470][accessDate: 04-11-2010]
Adenofibromatous hypertrophy of prostate
Hypertrophy (benign) of prostate[accessedResource: ICD9:600.0][accessDate: 04-11-2010]
GeneRIF:15136785
Nodular hyperplasia of prostate gland
GeneRIF:16018939
C7H7NO3
Asacol
Mesasal
5-amino-2-hydroxybenzoic acid
5-Aminosalicylic acid
Rowasa
5-ASA
Claversal
Pentasa
Canasa
Mesalazine
mesalamine
An aromatic amine that has formula C7H7NO3.
CHEBI:6775
Asacolitin
InChI=1/C7H7NO3/c8-4-1-2-6(9)5(3-4)7(10)11/h1-3,9H,8H2,(H,10,11)/f/h10H
Mesalazinum
InChIKey=KBOPZPXVLCULAV-KZFATGLACE
p-Aminosalicylsaeure
Nc1ccc(O)c(c1)C(O)=O
3-carboxy-4-hydroxyaniline
Salofalk
m-Aminosalicylic acid
Mesalazina
Fisalamine
Lixacol
Iialda
http://www.ebi.ac.uk/efo/EFO_0001569
Jie Zheng
feature extraction
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#feature_extraction
MO_928
James Malone
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#feature_extraction[accessedResource: MO_928][accessDate: 04-11-2010]
The process of obtaining quantifiable values from the scanned image of the array. Exact synonyms: image analysis, image quantification
GeneRIF:15579033
papillary renal cell carcinoma
Chromophil Carcinoma of the Kidney
NCIt:C6975
Chromophil Carcinoma of the Kidney[accessedResource: NCIt:C6975][accessDate: 04-11-2010]
Chromophil Renal Cell Carcinoma
Chromophil Carcinoma of kidney
Papillary renal cell carcinoma is a renal cell carcinoma characterized as the second most common type of renal cell carcinoma. The cancerous cells form some projections in a finger shape, called papillae, in the tumor. This type of cancer is more common among African Americans and has a good prognosis if treated with surgery in its early stages.
Chromophil Renal Cell Carcinoma[accessedResource: NCIt:C6975][accessDate: 04-11-2010]
Also known as chromophil carcinoma, it represents a minority of renal cell carcinomas. It can be hereditary or sporadic. The sporadic papillary renal cell carcinoma is characterized by trisomy of chromosomes 7, 16, and 17, and loss of chromosome Y. The peak incidence is in the sixth and seven decades. It is classified as type 1 or 2, based on the cytoplasmic volume and the thickness of the lining neoplastic cells. The prognosis is more favorable than for conventional (clear cell) renal cell carcinoma. -- 2003[accessedResource: NCIt:C6975][accessDate: 04-11-2010]
DOID:4465
Also known as chromophil carcinoma, it represents a minority of renal cell carcinomas. It can be hereditary or sporadic. The sporadic papillary renal cell carcinoma is characterized by trisomy of chromosomes 7, 16, and 17, and loss of chromosome Y. The peak incidence is in the sixth and seven decades. It is classified as type 1 or 2, based on the cytoplasmic volume and the thickness of the lining neoplastic cells. The prognosis is more favorable than for conventional (clear cell) renal cell carcinoma. -- 2003
GeneRIF:15502805
Papillary renal cell carcinoma is a renal cell carcinoma characterized as the second most common type of renal cell carcinoma. The cancerous cells form some projections in a finger shape, called papillae, in the tumor. This type of cancer is more common among African Americans and has a good prognosis if treated with surgery in its early stages.[accessedResource: DOID:4465][accessDate: 04-11-2010]
James Malone
GeneRIF:15073597
Papillary (Chromophil) Renal Cell Carcinoma[accessedResource: NCIt:C6975][accessDate: 04-11-2010]
Chromophil Carcinoma of Kidney[accessedResource: NCIt:C6975][accessDate: 04-11-2010]
Papillary (Chromophil) Renal Cell Carcinoma
Palmitinsaeure
InChI=1/C16H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16(17)18/h2-15H2,1H3,(H,17,18)/f/h17H
Palmitic acid
n-hexadecanoic acid
CH3-[CH2]14-COO(-)
A straight-chain, 16-carbon saturated fatty acid and major component of the oil from palm trees; the first fatty acid produced during lipogenesis, from which longer fatty acids can be produced. Reportedly has detrimental cardiovascular effects when there is insufficient intake of linoleic acid.
hexadecoic acid
Hexadecylic acid
CCCCCCCCCCCCCCCC(O)=O
A straight-chain saturated fatty acid that has formula C16H32O2.
palmitate
CH3-[CH2]14-COOH
InChIKey=IPCSVZSSVZVIGE-HCKMINDGCQ
C16H32O2
hexadecanoic acid, ion(1-)
Hexadecanoic acid
Pentadecanecarboxylic acid
hexadecanoate
cetylic acid
http://www.ebi.ac.uk/efo/EFO_0001552
n-hexadecoic acid
1-Pentadecanecarboxylic acid
CHEBI:15756
A straight-chain, sixteen-carbon saturated fatty acid and major component of the oil from palm trees; the first fatty acid produced during lipogenesis, from which longer fatty acids can be produced. Reportedly has detrimental cardiovascular effects when there is insufficient intake of linoleic acid.
MCC:0000356
NCI-H460
Tomasz Adamusiak
NCIt:C14172
For neoplasms, a non-infiltrating and non-metastasizing neoplastic process that is characterized by the absence of morphologic features associated with malignancy (e.g., severe atypia, nuclear pleomorphism, tumor cell necrosis, and abnormal mitoses). For other conditions, a process that is mild in nature and not dangerous to health.
For neoplasms, a non-infiltrating and non-metastasizing neoplastic process that is characterized by the absence of morphologic features associated with malignancy (e.g., severe atypia, nuclear pleomorphism, tumor cell necrosis, and abnormal mitoses). For other conditions, a process that is mild in nature and not dangerous to health.[accessedResource: NCIt:C14172][accessDate: 04-11-2010]
benign
Tomasz Adamusiak
Jie Zheng
N-[(E)-AMINO(IMINO)METHYL]-N-METHYLGLYCINE
N-methyl-N-guanylglycine
CN(CC(O)=O)C(N)=N
creatine
N-amidinosarcosine
Methylglycocyamine
InChI=1/C4H9N3O2/c1-7(4(5)6)2-3(8)9/h2H2,1H3,(H3,5,6)(H,8,9)/f/h5,8H,6H2
alpha-Methylguanidino acetic acid
A glycine derivative that has formula C4H9N3O2.
(N-methylcarbamimidamido)acetic acid
Creatin
(alpha-methylguanido)acetic acid
N-(aminoiminomethyl)-N-methylglycine
Kreatin
InChIKey=CVSVTCORWBXHQV-FVNFBLHMCI
C4H9N3O2
http://www.ebi.ac.uk/efo/EFO_0001514
CHEBI:16919
lisinopril
James Malone
N(2)-[(1S)-1-carboxy-3-phenylpropyl]-L-lysyl-L-proline
http://www.ebi.ac.uk/efo/EFO_0001566
A dipeptide that has formula C21H31N3O5.
[N2-[(S)-1-CARBOXY-3-PHENYLPROPYL]-L-LYSYL-L-PROLINE
CHEBI:43755
(S)-1-(N(2)-(1-carboxy-3-phenylpropyl)-L-lysyl)-L-proline
NCCCC[C@H](N[C@@H](CCc1ccccc1)C(O)=O)C(=O)N1CCC[C@H]1C(O)=O
C21H31N3O5
InChI=1/C21H31N3O5/c22-13-5-4-9-16(19(25)24-14-6-10-18(24)21(28)29)23-17(20(26)27)12-11-15-7-2-1-3-8-15/h1-3,7-8,16-18,23H,4-6,9-14,22H2,(H,26,27)(H,28,29)/t16-,17-,18-/m0/s1/f/h26,28H
InChIKey=RLAWWYSOJDYHDC-YMXGEOMKDH
lisinopril anhydrous
FBbt:00001690
CL:0000392
crystal cell
Tomasz Adamusiak
James Malone
MS428
James Malone
Ele Holloway
DMS153
James Malone
Ele Holloway
FBst0000001
Canton S
James Malone
R1 is a mouse embryonic stem cell line.
James Malone
Ele Holloway
R1
MO_575
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#sex_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#sex_design[accessedResource: MO_575][accessDate: 04-11-2010]
sex design
Tomasz Adamusiak
[H][C@](C)(NC(=O)[C@@]([H])(NC(=O)c1nc(nc(N)c1C)[C@H](CC(N)=O)NC[C@H](N)C(N)=O)[C@@]([H])(O[C@@H]1O[C@@H](CO)[C@@H](O)[C@H](O)[C@@H]1O[C@H]1O[C@H](CO)[C@@H](O)[C@H](OC(N)=O)[C@@H]1O)c1c[nH]cn1)[C@@H](O)[C@H](C)C(=O)N[C@]([H])(C(=O)NCCc1nc(cs1)-c1nc(cs1)C(=O)NCCC[S+](C)C)[C@@]([H])(C)O
(betaR)-N(alpha)-{[6-amino-2-((1S)-3-amino-1-{[(2S)-2,3-diamino-3-oxopropyl]amino}-3-oxopropyl)-5-methylpyrimidin-4-yl]carbonyl}-beta-{2-O-[3-O-(aminocarbonyl)-alpha-D-mannopyranosyl]-alpha-L-gulopyranosyloxy}-N-[(1R,2S,3S)-5-({(1S,2R)-1-[({2-[4-({[3-(dimethylsulfonio)propyl]amino}carbonyl)-2,4'-bi-1,3-thiazol-2'-yl]ethyl}amino)carbonyl]-2-hydroxypropyl}amino)-3-hydroxy-4-methyl-5-oxopentan-2-yl]-L-histidinamide
InChIKey=OYVAGSVQBOHSSS-IIMGSDJHDB
CHEBI:3139
A bleomycin that has formula C55H84N17O21S3.
C55H84N17O21S3
InChI=1/C55H83N17O21S3/c1-20-33(69-46(72-44(20)58)25(12-31(57)76)64-13-24(56)45(59)82)50(86)71-35(41(26-14-61-19-65-26)91-54-43(39(80)37(78)29(15-73)90-54)92-53-40(81)42(93-55(60)88)38(79)30(16-74)89-53)51(87)66-22(3)36(77)21(2)47(83)70-34(23(4)75)49(85)63-10-8-32-67-28(18-94-32)52-68-27(17-95-52)48(84)62-9-7-11-96(5)6/h14,17-19,21-25,29-30,34-43,53-54,64,73-75,77-81H,7-13,15-16,56H2,1-6H3,(H13-,57,58,59,60,61,62,63,65,66,69,70,71,72,76,82,83,84,85,86,87,88)/p+1/t21-,22+,23+,24-,25-,29-,30+,34-,35-,36-,37+,38+,39-,40-,41-,42-,43-,53+,54-/m0/s1/fC55H84N17O21S3/h61-63,66,70-71H,57-60H2/q+1
Bleomycin
http://www.ebi.ac.uk/efo/EFO_0001494
bleomycin A2
N(1)-[3-(dimethylsulfonio)propyl]bleomycinamide
ZFS:0000024
segmentation 5-9 somites
James Malone
dioxidosulfur
A sulfur oxide that has formula O2S.
oxosulfane oxide
Schwefeldioxid
sulphur dioxide
InChI=1/O2S/c1-3-2
sulfurous oxide
Schwefel(IV)-oxid
http://www.ebi.ac.uk/efo/EFO_0001619
CHEBI:18422
O=S=O
O2S
InChIKey=RAHZWNYVWXNFOC-UHFFFAOYAT
sulfurous anhydride
Sulfur dioxide
SO2
S1
James Malone
Ele Holloway
myelodysplastic syndrome
James Malone
HPAC
James Malone
Ele Holloway
GA10
James Malone
Ele Holloway
MFO:0003460
Multicellular anatomical structure with largely bona fide boundary that transduces some sensory stimulus to the nervous system.
sensory system
WBbt:0005832
sense organ
TAO:0000182
MAT:0000031
central posterior thalamic nucleus
central posterior thalamic nucleus[accessedResource: TAO:0000182][accessDate: 04-11-2010]
central caudal thalamic nucleus
sense organ[accessedResource: MAT:0000031][accessDate: 04-11-2010]
James Malone
Multicellular anatomical structure with largely bona fide boundary that transduces some sensory stimulus to the nervous system.[accessedResource: FBbt:00005155][accessDate: 04-11-2010]
AAO:0000555
ZFA:0000282
sensory systems[accessedResource: ZFA:0000282][accessDate: 04-11-2010]
sensory systems
FBbt:00005155
MA:0002442
central caudal thalamic nucleus[accessedResource: TAO:0000182][accessDate: 04-11-2010]
mammary gland cell line
http://www.ebi.ac.uk/efo/EFO_0001876
CHEBI:48354
polar solvent
James Malone
C5H11NO2S
Hmet
2-amino-4-(methylthio)butanoic acid
A sulfur-containing amino acid that has formula C5H11NO2S.
2-amino-4-(methylsulfanyl)butanoic acid
InChIKey=FFEARJCKVFRZRR-QDQILVOLCH
CSCCC(N)C(O)=O
InChI=1/C5H11NO2S/c1-9-3-2-4(6)5(7)8/h4H,2-3,6H2,1H3,(H,7,8)/f/h7H
methionine
alpha-amino-gamma-methylmercaptobutyric acid
2-Amino-4-(methylthio)butyric acid
metionina
Methionin
hindlimb
Inferior member[accessedResource: FMAID:7184][accessDate: 04-11-2010]
SAEL:49
EMAPA:17458
James Malone
XAO:0003031
Lower extremity
MAT:0000395
EHDAA:6094
lower limb
Lower extremity[accessedResource: FMAID:7184][accessDate: 04-11-2010]
Inferior member
Either of two extremities of four-footed non-primate land animals. It usually consists of a femur, tibia and fibula, tarsals, metatarsals, and toes.[accessedResource: BTO:0002345][accessDate: 04-11-2010]
BTO:0002345
Either of two extremities of four-footed non-primate land animals. It usually consists of a femur, tibia and fibula, tarsals, metatarsals, and toes.
lower limb[accessedResource: MAT:0000395][accessDate: 04-11-2010]
FMAID:7184
MA:0000026
EV:0100015
ZFS:0000022
gastrula bud
James Malone
MKN-7 cell[accessedResource: BTO:0002382][accessDate: 04-11-2010]
BTO:0002382
JCRB1025
MKN7 cell[accessedResource: BTO:0002382][accessDate: 04-11-2010]
MKN7
MKN7 cell
Ele Holloway
MKN-7 cell
Well differentiated human gastric adenocarcinoma cell line.
MKN-7
Well differentiated human gastric adenocarcinoma cell line.[accessedResource: BTO:0002382][accessDate: 04-11-2010]
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158701&type=germplasm
CS57677 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158695&type=germplasm
CS57677
James Malone
CHEBI:50845
doxiciclina
doxycycline (anhydrous)
http://www.ebi.ac.uk/efo/EFO_0001528
5-hydroxy-alpha-6-deoxytetracycline
doxycyclinum
Doxycyclin
A tetracycline that has formula C22H24N2O8.
doxycycline
Supracyclin
Vibramycin
6alpha-deoxy-5-oxytetracycline
Jenacyclin
InChIKey=JBIWCJUYHHGXTC-RFTRKGKODR
[H][C@@]12[C@@H](C)c3cccc(O)c3C(=O)C1=C(O)[C@]1(O)C(=O)C(C(N)=O)=C(O)[C@@H](N(C)C)[C@]1([H])[C@H]2O
C22H24N2O8
[H][C@@]12[C@@H](C)c3cccc(O)c3C(=O)C1=C(O)[C@]4(O)C(=O)C(C(N)=O)=C(O)[C@@H](N(C)C)[C@]4([H])[C@H]2O
InChI=1/C22H24N2O8/c1-7-8-5-4-6-9(25)11(8)16(26)12-10(7)17(27)14-15(24(2)3)18(28)13(21(23)31)20(30)22(14,32)19(12)29/h4-7,10,14-15,17,25,27-29,32H,1-3H3,(H2,23,31)/t7-,10+,14+,15-,17-,22-/m0/s1/f/h23H2
(4S,4aR,5S,5aR,6R,12aS)-4-(dimethylamino)-3,5,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-1,4,4a,5,5a,6,11,12a-octahydrotetracene-2-carboxamide
systemic lupus erythematosus
EV:0400043
systemic lupus erythematosus
FMAID:85519
Embryonic endoderm
Embryonic endoderm[accessedResource: FMAID:85519][accessDate: 04-11-2010]
definitive endoderm
Tomasz Adamusiak
Jie Zheng
Jie Zheng
NCIt:C41261
Denotes person with European, Middle Eastern, or North African ancestral origin who identifies, or is identified, as White.[accessedResource: NCIt:C41261][accessDate: 04-11-2010]
Caucasian
Whites[accessedResource: NCIt:C41261][accessDate: 04-11-2010]
Caucasoid
Occidental
Caucasoid[accessedResource: NCIt:C41261][accessDate: 04-11-2010]
European
Occidental[accessedResource: NCIt:C41261][accessDate: 04-11-2010]
Denotes person with European, Middle Eastern, or North African ancestral origin who identifies, or is identified, as White.
Whites
Caucasians
White
Tomasz Adamusiak
Caucasians[accessedResource: NCIt:C41261][accessDate: 04-11-2010]
White[accessedResource: NCIt:C41261][accessDate: 04-11-2010]
James Malone
A neuroglial cell of the peripheral nervous system which forms the insulating myelin sheaths of peripheral axons.
Neurilemmal cell[accessedResource: CL:0000218][accessDate: 04-11-2010]
Peripheral neuroglial cell
Neurilemmal cell
Peripheral neuroglial cell[accessedResource: CL:0000218][accessDate: 04-11-2010]
A neuroglial cell of the peripheral nervous system which forms the insulating myelin sheaths of peripheral axons.[accessedResource: CL:0000218][accessDate: 04-11-2010]
myelinating Schwann cell[accessedResource: CL:0000218][accessDate: 04-11-2010]
CL:0000218
Schwann cell
myelinating Schwann cell
CTCL
Cutaneous T-cell lymphoma
James Malone
http://www.ebi.ac.uk/efo/EFO_0001852
xenobiotics
foreign"; bios "life
A xenobiotic (Greek, xenos "foreign"; bios "life") is a compound that is foreign to a living organism. Principal xenobiotics include: drugs, carcinogens and various compounds that have been introduced into the environment by artificial means.
CHEBI:35703
xenobiotic
xenobiotic compounds
Publication in preparation before submitting to a journal.
in preparation
Tomasz Adamusiak
ZFS:0000007
cleavage 64-cell
James Malone
http://www.ebi.ac.uk/efo/EFO_0001816
CHEBI:22333
Highly reactive chemical that introduces alkyl radicals into biologically active molecules and thereby prevents their proper functioning. It could be used as an antineoplastic agent, but it might be very toxic, with carcinogenic, mutagenic, teratogenic, and immunosuppressant actions. It could also be used as a component of poison gases.
alkylating agent
James Malone
Intervention or Procedure
NCIt:C25218
Tomasz Adamusiak
Intervention[accessedResource: NCIt:C25218][accessDate: 04-11-2010]
Jie Zheng
medical procedure
SURGICAL AND MEDICAL PROCEDURES
Interventional[accessedResource: NCIt:C25218][accessDate: 04-11-2010]
An activity that produces an effect, or that is intended to alter the course of a disease in a patient or population. This is a general term that encompasses the medical, social, behavioral, and environmental acts that can have preventive, therapeutic, or palliative effects.
Intervention Strategies[accessedResource: NCIt:C25218][accessDate: 04-11-2010]
Intervention Strategies
SURGICAL AND MEDICAL PROCEDURES[accessedResource: NCIt:C25218][accessDate: 04-11-2010]
Procedure[accessedResource: NCIt:C25218][accessDate: 04-11-2010]
Interventional
Intervention or Procedure[accessedResource: NCIt:C25218][accessDate: 04-11-2010]
An activity that produces an effect, or that is intended to alter the course of a disease in a patient or population. This is a general term that encompasses the medical, social, behavioral, and environmental acts that can have preventive, therapeutic, or palliative effects.[accessedResource: NCIt:C25218][accessDate: 04-11-2010]
Procedure
Intervention
SKIN AND SUBCUTANEOUS TISSUE DISORDERS
Skin Diseases and Manifestations
Cutaneous Disorder
skin disease
Skin Disorder
Skin Diseases and Manifestations[accessedResource: NCIt:C3371][accessDate: 04-11-2010]
SKIN AND SUBCUTANEOUS TISSUE DISORDERS[accessedResource: NCIt:C3371][accessDate: 04-11-2010]
Any deviation from the normal structure or function of the skin or subcutaneous tissue that is manifested by a characteristic set of symptoms and signs.
Skin Disorder[accessedResource: NCIt:C3371][accessDate: 04-11-2010]
NCIt:C3371
James Malone
Any deviation from the normal structure or function of the skin or subcutaneous tissue that is manifested by a characteristic set of symptoms and signs.[accessedResource: NCIt:C3371][accessDate: 04-11-2010]
Cutaneous Disorder[accessedResource: NCIt:C3371][accessDate: 04-11-2010]
N(6)-(benzylamino)purine
Cytokinin B
N-BENZYL-9H-PURIN-6-AMINE
benzyladenine
http://www.ebi.ac.uk/efo/EFO_0001577
BAP
C(Nc1ncnc2[nH]cnc12)c1ccccc1
N-benzyladenine
InChIKey=NWBJYWHLCVSVIJ-YENFCIRVCT
6-(benzylamino)purine
InChI=1/C12H11N5/c1-2-4-9(5-3-1)6-13-11-10-12(15-7-14-10)17-8-16-11/h1-5,7-8H,6H2,(H2,13,14,15,16,17)/f/h13,15H
6-BAP
A 6-aminopurine that has formula C12H11N5.
N6-Benzyladenine
6-[(phenylmethyl)amino]-9H-purine
CHEBI:29022
C12H11N5
http://www.arabidopsis.org/servlets/TairObject?id=1005158639&type=germplasm
CS57615 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158639&type=germplasm
CS57615
James Malone
InChI=1/C27H44O6/c1-15(2)6-7-23(31)26(5,32)22-9-11-27(33)17-12-19(28)18-13-20(29)21(30)14-24(18,3)16(17)8-10-25(22,27)4/h12,15-16,18,20-23,29-33H,6-11,13-14H2,1-5H3/t16-,18-,20+,21-,22-,23+,24+,25+,26+,27+/m0/s1
(22R)-2beta,3beta,14,20,22-pentahydroxy-5beta-cholest-7-en-6-one
InChIKey=PJYYBCXMCWDUAZ-JJJZTNILBL
[H][C@]12CC[C@]3(C)[C@]([H])(CC[C@@]3(O)C1=CC(=O)[C@]1([H])C[C@@H](O)[C@@H](O)C[C@]21C)[C@@](C)(O)[C@H](O)CCC(C)C
ponasterone A
C27H44O6
CHEBI:28135
http://www.ebi.ac.uk/efo/EFO_0001594
A 14alpha-hydroxy steroid that has formula C27H44O6.
25-Deoxycedysterone
GM12874
James Malone
NCIt:C12669
FMAID:3734
The major arterial trunk that carries oxygenated blood from the left ventricle into the ascending aorta behind the heart, the aortic arch, through the thorax as the descending aorta and through the abdomen as the abdominal aorta; it bifurcates into the left and right common iliac arteries.[accessedResource: NCIt:C12669][accessDate: 04-11-2010]
aorta
BTO:0000135
adult aorta
Aortic[accessedResource: NCIt:C12669][accessDate: 04-11-2010]
Trunk of systemic arterial tree[accessedResource: FMAID:3734][accessDate: 04-11-2010]
dorsal aorta[accessedResource: ZFA:0000014][accessDate: 04-11-2010]
MAT:0000035
Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery.
dorsal aortic root[accessedResource: ZFA:0000014][accessDate: 04-11-2010]
SAEL:6
Aortic
James Malone
Trunk of aortic tree
TAO:0000014
ZFA:0000014
Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery.[accessedResource: ZFA:0000014][accessDate: 04-11-2010]
dorsal aortic root
Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery. Kimmel et al, 1995.
DA
MA:0000476
Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery. Kimmel et al, 1995.[accessedResource: TAO:0000014][accessDate: 04-11-2010]
TADS:0000154
dorsal aorta
adult aorta[accessedResource: FBbt:00003153][accessDate: 04-11-2010]
The great arterial trunk that carries blood from the heart to be distributed by branch arteries through the body.[accessedResource: BTO:0000135][accessDate: 04-11-2010]
EV:0100027
Trunk of aortic tree[accessedResource: FMAID:3734][accessDate: 04-11-2010]
DA[accessedResource: ZFA:0000014][accessDate: 04-11-2010]
The major arterial trunk that carries oxygenated blood from the left ventricle into the ascending aorta behind the heart, the aortic arch, through the thorax as the descending aorta and through the abdomen as the abdominal aorta; it bifurcates into the left and right common iliac arteries.
The great arterial trunk that carries blood from the heart to be distributed by branch arteries through the body.
Trunk of systemic arterial tree
XAO:0003010
FBbt:00003153
GM12144
James Malone
http://en.wikipedia.org/wiki/Grivet
grivet
African green monkey
http://www.ebi.ac.uk/efo/EFO_0002638
The Grivet (Chlorocebus aethiops) is an Old World monkey with long white tufts of hair along the sides of the face.
Chlorocebus aethiops
James Malone
http://jaxmice.jax.org/strain/009266.html
ILSXISS28/TejJ
Tomasz Adamusiak
GeneRIF:12399463
GeneRIF:12739786
GeneRIF:15325803
GeneRIF:12684695
GeneRIF:12784384
GeneRIF:15241467
Proliferative arthritis
GeneRIF:15077293
GeneRIF:12913926
GeneRIF:12870871
GeneRIF:12823854
GeneRIF:12509789
A chronic systemic disease, primarily of the joints, marked by inflammatory changes in the synovial membranes and articular structures, widespread fibrinoid degeneration of the collagen fibers in mesenchymal tissues, and by atrophy and rarefaction of bony structures. Etiology is unknown, but autoimmune mechanisms have been implicated.[accessedResource: MSH:D001172][accessDate: 04-11-2010]
Proliferative arthritis[accessedResource: SNOMEDCT:69896004][accessDate: 04-11-2010]
GeneRIF:15313475
GeneRIF:11961170
Rheumatoid arthritis NOS
GeneRIF:12937131
GeneRIF:11472854
GeneRIF:15031666
GeneRIF:12858434
GeneRIF:15986374
GeneRIF:15641088
GeneRIF:12913938
GeneRIF:16192646
GeneRIF:15794197
NCIt:C27206
Rheumatoid disease[accessedResource: SNOMEDCT:69896004][accessDate: 04-11-2010]
GeneRIF:11294880
GeneRIF:12115161
GeneRIF:12571844
GeneRIF:11856352
SNOMEDCT:69896004
GeneRIF:16215318
GeneRIF:15272075
rheumatoid arthritis
RA - Rheumatoid arthritis[accessedResource: SNOMEDCT:69896004][accessDate: 04-11-2010]
GeneRIF:15464974
GeneRIF:12486608
GeneRIF:15603867
GeneRIF:12672182
GeneRIF:12193472
GeneRIF:15077296
GeneRIF:15890884
GeneRIF:12966588
GeneRIF:12847682
GeneRIF:12879272
GeneRIF:12723989
GeneRIF:14872483
GeneRIF:12115177
GeneRIF:14707104
GeneRIF:15338479
GeneRIF:12846056
GeneRIF:12060849
GeneRIF:15290725
GeneRIF:15950180
GeneRIF:15593216
GeneRIF:14558082
GeneRIF:12508778
GeneRIF:16200580
GeneRIF:15188357
GeneRIF:12242722
GeneRIF:12826377
GeneRIF:12846052
GeneRIF:15167967
GeneRIF:14687710
GeneRIF:12808103
GeneRIF:12571842
GeneRIF:12140750
MSH:D001172
GeneRIF:15457473
GeneRIF:14630402
Rheumatoid arthritis NOS (disorder)
GeneRIF:15751070
GeneRIF:12039073
DOID:7148
GeneRIF:15208781
GeneRIF:15535837
GeneRIF:15290745
GeneRIF:14994383
GeneRIF:12651614
NCIt:C2884
GeneRIF:15877293
GeneRIF:12632415
GeneRIF:14532992
GeneRIF:15759013
GeneRIF:12413610
GeneRIF:14734742
A chronic systemic disease, primarily of the joints, marked by inflammatory changes in the synovial membranes and articular structures, widespread fibrinoid degeneration of the collagen fibers in mesenchymal tissues, and by atrophy and rarefaction of bony structures. Etiology is unknown, but autoimmune mechanisms have been implicated.
GeneRIF:15638044
GeneRIF:12115181
GeneRIF:12905469
GeneRIF:11466388
GeneRIF:12784383
RhA - Rheumatoid arthritis[accessedResource: SNOMEDCT:69896004][accessDate: 04-11-2010]
GeneRIF:11708406
GeneRIF:14749527
GeneRIF:12913925
GeneRIF:14558087
GeneRIF:11916172
GeneRIF:12705898
GeneRIF:16014623
GeneRIF:12401808
GeneRIF:15967793
Chronic rheumatic arthritis[accessedResource: SNOMEDCT:69896004][accessDate: 04-11-2010]
GeneRIF:15184985
GeneRIF:12610796
GeneRIF:14976209
GeneRIF:11949889
GeneRIF:12454286
GeneRIF:15022344
GeneRIF:15457447
GeneRIF:12847274
GeneRIF:16175503
GeneRIF:16014635
GeneRIF:15875058
SNOMEDCT:287010008
GeneRIF:12553721
GeneRIF:11838837
GeneRIF:15083890
GeneRIF:15007027
GeneRIF:12209506
GeneRIF:12070776
GeneRIF:11733367
GeneRIF:14730602
GeneRIF:12114257
GeneRIF:15725578
GeneRIF:15290728
GeneRIF:11983200
GeneRIF:16052590
GeneRIF:15529384
Rheumatoid disease
GeneRIF:15971427
GeneRIF:15077295
GeneRIF:15517620
GeneRIF:15896202
GeneRIF:12635863
GeneRIF:15591039
GeneRIF:14608356
GeneRIF:15188353
GeneRIF:15457444
GeneRIF:12208866
GeneRIF:15743888
GeneRIF:16098099
Rheumatoid arthritis is a rheumatologic disorder described as an autoimmune disease that is usually a chronic disease and is characterized especially by pain, stiffness, inflammation, swelling, and sometimes destruction of joints.
GeneRIF:12193736
GeneRIF:15254248
GeneRIF:12574395
GeneRIF:15022318
GeneRIF:14994386
GeneRIF:11971877
GeneRIF:12739037
GeneRIF:16107870
James Malone
Rheumatoid arthritis NOS[accessedResource: DOID:7148][accessDate: 04-11-2010]
GeneRIF:12091338
GeneRIF:12374691
GeneRIF:14979058
GeneRIF:12119414
GeneRIF:15940757
GeneRIF:12097415
GeneRIF:12833157
GeneRIF:15022314
Rheumatoid arthritis is a rheumatologic disorder described as an autoimmune disease that is usually a chronic disease and is characterized especially by pain, stiffness, inflammation, swelling, and sometimes destruction of joints.[accessedResource: DOID:7148][accessDate: 04-11-2010]
Rheumatic gout
GeneRIF:15641039
Arthritis or polyarthritis, rheumatic[accessedResource: DOID:7148][accessDate: 04-11-2010]
GeneRIF:15284119
GeneRIF:11857065
GeneRIF:15634264
GeneRIF:15641066
GeneRIF:12643440
GeneRIF:12444174
GeneRIF:12782719
GeneRIF:12847677
GeneRIF:16151416
GeneRIF:12067756
GeneRIF:12847280
GeneRIF:16142859
Atrophic Arthritis[accessedResource: NCIt:C27206][accessDate: 04-11-2010]
GeneRIF:15850806
GeneRIF:15248212
GeneRIF:12528108
GeneRIF:15742432
Chronic rheumatic arthritis
GeneRIF:12702665
RA - Rheumatoid arthritis
GeneRIF:14984939
GeneRIF:16127156
GeneRIF:12465141
GeneRIF:14617033
GeneRIF:12235453
GeneRIF:12114309
GeneRIF:16320327
GeneRIF:12089610
GeneRIF:15632153
GeneRIF:12707342
GeneRIF:12759455
GeneRIF:12847680
ICD9:714.0
GeneRIF:14647385
RhA - Rheumatoid arthritis
Rheumatoid arthritis NOS (disorder)[accessedResource: DOID:7148][accessDate: 04-11-2010]
GeneRIF:11920278
GeneRIF:15259375
GeneRIF:15753214
GeneRIF:15723199
GeneRIF:15045639
GeneRIF:12697270
GeneRIF:15569925
GeneRIF:11906819
GeneRIF:15146412
GeneRIF:12047361
GeneRIF:15170914
GeneRIF:11861275
GeneRIF:14578453
GeneRIF:12054474
GeneRIF:12135431
GeneRIF:16287870
GeneRIF:11708408
GeneRIF:12175089
GeneRIF:11801682
GeneRIF:15381082
GeneRIF:14705216
GeneRIF:16038875
GeneRIF:15761492
GeneRIF:12183385
GeneRIF:16134725
GeneRIF:15389525
Arthritis or polyarthritis, rheumatic
GeneRIF:12165497
GeneRIF:11922198
GeneRIF:15794198
GeneRIF:12913922
GeneRIF:15205567
GeneRIF:15163116
GeneRIF:15841095
GeneRIF:12070782
GeneRIF:12564836
GeneRIF:16200584
GeneRIF:14505215
GeneRIF:16288117
GeneRIF:12847683
GeneRIF:12508775
GeneRIF:12734884
GeneRIF:11966773
GeneRIF:12064825
GeneRIF:15146416
Rheumatic gout[accessedResource: SNOMEDCT:69896004][accessDate: 04-11-2010]
GeneRIF:12168808
GeneRIF:14726963
GeneRIF:15641073
GeneRIF:13130464
GeneRIF:12928381
GeneRIF:15879144
GeneRIF:15515123
GeneRIF:11881821
Rheumatoid arthritis (disorder)
GeneRIF:15859024
GeneRIF:15077297
GeneRIF:12846053
atrophic Arthritis
GeneRIF:12517948
Rheumatoid arthritis (disorder)[accessedResource: SNOMEDCT:69896004][accessDate: 04-11-2010]
GeneRIF:15022325
GeneRIF:12594835
GeneRIF:12793199
GeneRIF:12508786
GeneRIF:15470519
GeneRIF:14558083
GeneRIF:12233877
GeneRIF:12846065
GeneRIF:11725485
GeneRIF:15022315
GeneRIF:16200608
GeneRIF:15146411
GeneRIF:14991531
GeneRIF:15457442
GeneRIF:16329077
GeneRIF:15934099
GeneRIF:16002730
GeneRIF:12610797
GeneRIF:12718750
GeneRIF:15959531
GeneRIF:12095257
GeneRIF:14872281
GeneRIF:14749980
GeneRIF:15170913
GeneRIF:12233873
GeneRIF:16366416
plant growth retardants
plant growth inhibitors
plant growth inhibitor
http://www.ebi.ac.uk/efo/EFO_0001833
CHEBI:35219
plant growth retardant
James Malone
James Malone
floor of mouth
NCIt:C54187
Floor of the Mouth
The area of the mouth under the ventral surface of the tongue.
The area of the mouth under the ventral surface of the tongue.[accessedResource: NCIt:C54187][accessDate: 04-11-2010]
Floor of the Mouth[accessedResource: NCIt:C54187][accessDate: 04-11-2010]
DOID:4468
[M]Clear cell adenocarcinoma NOS
Clear cell adenocarcinoma NOS (morphologic abnormality)[accessedResource: DOID:4468][accessDate: 04-11-2010]
GeneRIF:15102668
SNOMEDCT:189633003
GeneRIF:15884099
An adenocarcinoma characterized by the presence of varying combinations of clear and hobnail-shaped tumor cells. There are three predominant patterns described as tubulocystic, solid, and papillary. These tumors, usually located in the female reproductive organs, have been seen more frequently in young women since 1970 as a result of the association with intrauterine exposure to diethylstilbestrol. (From Holland et al., Cancer Medicine, 3d ed)[accessedResource: MSH:D018262][accessDate: 04-11-2010]
clear cell adenocarcinoma
GeneRIF:12937142
clear cell carcinoma
[M]Clear cell adenocarcinoma NOS[accessedResource: SNOMEDCT:189633003][accessDate: 04-11-2010]
An adenocarcinoma characterized by the presence of varying combinations of clear and hobnail-shaped tumor cells. There are three predominant patterns described as tubulocystic, solid, and papillary. These tumors, usually located in the female reproductive organs, have been seen more frequently in young women since 1970 as a result of the association with intrauterine exposure to diethylstilbestrol. (From Holland et al., Cancer Medicine, 3d ed)
Clear cell adenocarcinoma, mesonephroid[accessedResource: SNOMEDCT:30546008][accessDate: 04-11-2010]
GeneRIF:14559803
A malignant neoplasm composed of glandular epithelial clear cells. Various architectural patterns may be seen, including papillary, tubulocystic, and solid.
MSH:D018262
Clear cell adenocarcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:30546008][accessDate: 04-11-2010]
Clear cell adenocarcinoma, NOS
[M]Clear cell adenocarcinoma NOS (morphologic abnormality)
GeneRIF:15297970
GeneRIF:12086860
A malignant neoplasm composed of glandular epithelial clear cells. Various architectural patterns may be seen, including papillary, tubulocystic, and solid.[accessedResource: NCIt:C3766][accessDate: 04-11-2010]
James Malone
Mesonephroid Clear cell carcinoma
GeneRIF:12970394
Clear cell adenocarcinoma NOS (morphologic abnormality)
Clear cell adenocarcinoma, NOS[accessedResource: SNOMEDCT:30546008][accessDate: 04-11-2010]
GeneRIF:14729622
Clear cell adenocarcinoma (morphologic abnormality)
Clear Cell Adenocarcinomas[accessedResource: MSH:D018262][accessDate: 04-11-2010]
Mesonephroid clear cell adenocarcinoma
GeneRIF:14722919
[M]Clear cell adenocarcinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189633003][accessDate: 04-11-2010]
SNOMEDCT:30546008
Clear cell carcinoma[accessedResource: SNOMEDCT:30546008][accessDate: 04-11-2010]
NCIt:C3766
GeneRIF:15489654
GeneRIF:14633622
Clear Cell Adenocarcinomas
Mesonephroid Clear cell carcinoma[accessedResource: DOID:4468][accessDate: 04-11-2010]
uterine carcinoma
GM12812
James Malone
4483
James Malone
Ele Holloway
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Adenocarcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephroid Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:15062033
Kidney Clear Cell Carcinoma
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinoma, Renal Cell
Conventional (Clear Cell) Renal Cell Adenocarcinoma
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.[accessedResource: DOID:4467][accessDate: 10-05-2010]
1.8
Papillary Renal Cell Carcinoma
Clear Cell Renal Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Cell Carcinomas
Clear Cell Carcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Carcinoma, Collecting Duct (Kidney)
Hypernephromas
Sarcomatoid Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
clear cell carcinoma of kidney
Conventional (Clear Cell) Renal Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Clear cell carcinoma of kidney is a renal cell carcinoma described as the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
obsolete_renal clear cell carcinoma
Carcinoma, Nephroid
James Malone
Grawitz Tumor[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.
Carcinoma, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
conventional (Clear cell) renal cell carcinoma[accessedResource: DOID:4467][accessDate: 10-05-2010]
Hypernephroma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Hypernephroid Carcinomas
GeneRIF:14550470
Duct Carcinoma, Collecting (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:15709172
Clear Cell Adenocarcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
conventional renal cell carcinoma
Clear Cell Adenocarcinoma of the Kidney
NCIt:C4033
Hypernephroid Carcinoma
true
conventional (Clear cell) renal cell carcinoma
Grawitz tumour[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Carcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Tumor, Grawitz
Chromophobe Renal Cell Carcinoma
Clear Cell Carcinoma of the Kidney
Hypernephroid Carcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephroma
Carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Nephroid Carcinomas
Clear cell carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Renal Cell Adenocarcinomas
Kidney Clear Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
DOID:4467
SNOMEDCT:254915003
Sarcomatoid Renal Cell Carcinoma
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
Renal Cell Adenocarcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Clear Cell Carcinoma
Clear Cell Renal Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Clear Cell Adenocarcinoma of Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Carcinomas, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Clear cell carcinoma of kidney (disorder)[accessedResource: DOID:4467][accessDate: 10-05-2010]
Kidney Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
GeneRIF:12576453
Collecting Duct Carcinomas (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Clear Cell Adenocarcinoma, Kidney
Renal Clear Cell Adenocarcinoma
Carcinomas, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Clear cell carcinoma of kidney (disorder)
Adenocarcinoma, Renal Cell
Conventional Renal Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.
Hypernephromas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Papillary Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Clear Cell Renal Cell Carcinoma
Chromophobe Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinomas, Collecting Duct (Kidney)
Adenocarcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
duplicate of EFO_0000349 (clear cell renal carcinoma)
Grawitz tumour
Adenocarcinoma of kidney
Clear Cell Adenocarcinoma of Kidney
MSH:D002292
Carcinoma of kidney
hemopoietic cell
CL:0000988
A cell found predominately in the blood.[accessedResource: CL:0000081][accessDate: 04-11-2010]
Tomasz Adamusiak
haematopoietic cell[accessedResource: CL:0000988][accessDate: 04-11-2010]
blood cell[accessedResource: CL:0000081][accessDate: 04-11-2010]
haemopoietic cell
A blood cell.
haemopoietic cell[accessedResource: CL:0000988][accessDate: 04-11-2010]
A blood cell.[accessedResource: BTO:0000574][accessDate: 04-11-2010]
hematopoietic cell
BTO:0000574
CL:0000081
blood cell
haematopoietic cell
A cell of a hematopoietic lineage.[accessedResource: CL:0000988][accessDate: 04-11-2010]
A cell found predominately in the blood.
hemopoietic cell[accessedResource: BTO:0000574][accessDate: 04-11-2010]
A cell of a hematopoietic lineage.
MAT:0000020
animal fluid
James Malone
An assay with input RNA
RNA assay
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158655&type=germplasm
CS57631 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158655&type=germplasm
CS57631
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158814&type=germplasm
CS57790 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158814&type=germplasm
CS57790
James Malone
http://www.ebi.ac.uk/efo/EFO_0002646
Mus castaneus
James Malone
southeastern Asian house mouse
Mus musculus castenus
southeast Asian house mouse
Mus musculus castaneus
Mus casteneus
true
An independent continuant [snap:IndependentContinuant] consisting of a characteristic spatial shape in relation to some arrangement of other continuant [snap:Continuant] entities and of the medium which is enclosed in whole or in part by this characteristic spatial shape. Site [snap:Site] entities are entities that can be occupied by other continuant [snap:Continuant] entities.
http://www.ebi.ac.uk/efo/EFO_0001437
A site is an entity which consists of a characteristic spatial shape in relation to some arrangement of other material entities.
site
James Malone
ITM-E6E7
James Malone
Ele Holloway
mating type h minus
h -
A S. pombe mating type determined by the mat1-Mc and mat1-Mi on the mat1 locus.
h minus
h minus[accessedResource: PATO:0001345][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mating_type_h_minus
A S. pombe mating type determined by the mat1-Mc and mat1-Mi on the mat1 locus.[accessedResource: PATO:0001345][accessDate: 04-11-2010]
h -[accessedResource: PATO:0001345][accessDate: 04-11-2010]
James Malone
M
M[accessedResource: PATO:0001345][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mating_type_h_minus[accessedResource: MO_407][accessDate: 04-11-2010]
PATO:0001345
MO_407
NCI-H1793
James Malone
Ele Holloway
MAT:0000151
MA:0000688
limb skeleton
limb skeleton[accessedResource: MAT:0000151][accessDate: 04-11-2010]
limb bone
James Malone
GM11839
James Malone
hardware
HardwareType[accessedResource: MO_113][accessDate: 04-11-2010]
true
instrument
An instrument is a device which provides a mechanical or electronic function.
OBI_0400003
James Malone
Jie Zheng
Tomasz Adamusiak
MO_134
MO_113
HardwareType
Hardware[accessedResource: MO_134][accessDate: 04-11-2010]
CHEBI:35666
thiopurine
sulfanylpurines
mercaptopurines
http://www.ebi.ac.uk/efo/EFO_0001624
http://www.ebi.ac.uk/efo/EFO_0001568
thiopurines
http://www.arabidopsis.org/servlets/TairObject?id=1005158611&type=germplasm
CS57587 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158611&type=germplasm
CS57587
James Malone
A unit of molarity which is equal to 10^[-12] M.
picomolar
pM
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pM[accessedResource: MO_628][accessDate: 04-11-2010]
MO_628
true
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001813
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pM
Jie Zheng
non-steroidal anti-inflammatory drugs
non-steroidal anti-inflammatory agent
NSAIDs
NSAID
http://www.ebi.ac.uk/efo/EFO_0001582
An anti-inflammatory drug that is not a steroid. In addition to anti-inflammatory actions, non-steroidal anti-inflammatory drugs have analgesic, antipyretic, and platelet-inhibitory actions. They act by blocking the synthesis of prostaglandins by inhibiting cyclooxygenase, which converts arachidonic acid to cyclic endoperoxides, precursors of prostaglandins.
non-steroidal anti-inflammatory drug
EBV Infection
GeneRIF:14747532
GeneRIF:15368517
HUMAN HERPES VIRUS 4 INFECT[accessedResource: MSH:D020031][accessDate: 04-11-2010]
Human Herpes Virus 4 Infections
Herpesvirus 4 Infections, Human
SNOMEDCT:402121009
EPSTEIN BARR VIRUS INFECT[accessedResource: MSH:D020031][accessDate: 04-11-2010]
HUMAN HERPES VIRUS 4 INFECT
Epstein-Barr virus infection (disorder)[accessedResource: DOID:2938][accessDate: 04-11-2010]
EBV INFECT
Tumor Virus Infections[accessedResource: DOID:2938][accessDate: 04-11-2010]
EBV Infections[accessedResource: MSH:D020031][accessDate: 04-11-2010]
GeneRIF:15650182
GeneRIF:12163590
GeneRIF:12050395
GeneRIF:15808506
Virus Infections, Epstein-Barr
EBV Infection[accessedResource: NCIt:C38759][accessDate: 04-11-2010]
HUMAN HERPESVIRUS 4 INFECT
MSH:D020031
Human Herpesvirus 4 Infections[accessedResource: MSH:D020031][accessDate: 04-11-2010]
GeneRIF:11979459
GeneRIF:15929169
Human Herpes Virus 4 Infections[accessedResource: MSH:D020031][accessDate: 04-11-2010]
Epstein-Barr virus infection
GeneRIF:11813981
Tumor Virus Infections
GeneRIF:15170639
DOID:2938
INFECT EPSTEIN BARR VIRUS
Epstein-Barr virus infectious disease
EBV INFECT[accessedResource: MSH:D020031][accessDate: 04-11-2010]
Virus Infections, Epstein-Barr[accessedResource: MSH:D020031][accessDate: 04-11-2010]
NCIt:C38759
Epstein-Barr virus infectious disease[accessedResource: DOID:2938][accessDate: 04-11-2010]
GeneRIF:15047814
GeneRIF:14747531
HUMAN HERPESVIRUS 4 INFECT[accessedResource: MSH:D020031][accessDate: 04-11-2010]
GeneRIF:14607922
Infection with human herpesvirus 4 (HERPESVIRUS 4, HUMAN); which may facilitate the development of various lymphoproliferative disorders. These include BURKITT LYMPHOMA (African type), INFECTIOUS MONONUCLEOSIS, and oral hairy leukoplakia (LEUKOPLAKIA, HAIRY).[accessedResource: MSH:D020031][accessDate: 04-11-2010]
Infections, EBV
James Malone
Epstein-Barr virus infection (disorder)
GeneRIF:12707047
Infection with human herpesvirus 4 (HERPESVIRUS 4, HUMAN); which may facilitate the development of various lymphoproliferative disorders. These include BURKITT LYMPHOMA (African type), INFECTIOUS MONONUCLEOSIS, and oral hairy leukoplakia (LEUKOPLAKIA, HAIRY).
GeneRIF:15356108
GeneRIF:15324931
ZFS:0000034
hatching pec-fin
James Malone
The portion of the colon between the left colic flexure and the sigmoid colon at the pelvic brim; the portion of the descending colon lying in the left iliac fossa is sometimes called the iliac colon.
colon descendens[accessedResource: BTO:0000641][accessDate: 04-11-2010]
FMAID:14547
MAT:0000313
James Malone
BTO:0000641
descending colon
The portion of the colon between the left colic flexure and the sigmoid colon at the pelvic brim; the portion of the descending colon lying in the left iliac fossa is sometimes called the iliac colon.[accessedResource: BTO:0000641][accessDate: 04-11-2010]
colon descendens
http://www.arabidopsis.org/servlets/TairObject?id=1005158800&type=germplasm
CS57776 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158800&type=germplasm
CS57776
James Malone
A protocol description in which a material separation to recover the nucleic acid fraction of an input material is performed
nucleic acid extraction protocol
James Malone
MO_939
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#translational_bias_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#translational_bias_design[accessedResource: MO_939][accessDate: 04-11-2010]
translational bias design
Tomasz Adamusiak
MO_763
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hardware_manufacturer
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hardware_manufacturer[accessedResource: MO_763][accessDate: 04-11-2010]
hardware manufacturer
Tomasz Adamusiak
An organ of corti derived cell line
UBOC-1
UBOC1
James Malone
Beas2B
BEAS-2B
James Malone
µm
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#um[accessedResource: MO_421][accessDate: 04-11-2010]
true
Jie Zheng
um
http://www.ebi.ac.uk/efo/EFO_0001724
micrometre
MO_421
micron
A length unit which is equal to one millionth of a meter or 10^[-6] m.
Tomasz Adamusiak
A micrometer is a length unit which is equal to 1m x 10^-6.
James Malone
micrometer
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#um
PEL-5 is a human primary effusion lymphoma cell line
PEL-5
James Malone
Ele Holloway
embryonic day 14.5
Tomasz Adamusiak
Jie Zheng
hereditary breast ovarian cancer[accessedResource: DOID:5683][accessDate: 04-11-2010]
BRCA1[accessedResource: DOID:5683][accessDate: 04-11-2010]
DOID:5683
hereditary breast and ovarian cancer
BRCA1
BRCA2
Ele Holloway
Tomasz Adamusiak
hereditary breast ovarian cancer
BRCA2[accessedResource: DOID:5683][accessDate: 04-11-2010]
Familiar breast and Ovarian cancer syndrome
Familiar breast and Ovarian cancer syndrome[accessedResource: DOID:5683][accessDate: 04-11-2010]
U266
James Malone
DOID:6191
Embryonal sarcoma (morphologic abnormality)[accessedResource: DOID:6191][accessDate: 04-11-2010]
Undifferentiated sarcoma (morphologic abnormality)[accessedResource: DOID:6191][accessDate: 04-11-2010]
NCIt:C27096
SNOMEDCT:128734000
A rare malignant tumor of the liver, the incidence of which is highest in children between 6 and 10 years of age.[accessedResource: NCIt:C27096][accessDate: 04-11-2010]
James Malone
Undifferentiated (Embryonal) sarcoma
A rare malignant tumor of the liver, the incidence of which is highest in children between 6 and 10 years of age.
SNOMEDCT:59583009
Embryonal sarcoma[accessedResource: SNOMEDCT:59583009][accessDate: 04-11-2010]
Undifferentiated sarcoma (morphologic abnormality)
Embryonal Sarcoma
Undifferentiated (Embryonal) Sarcoma[accessedResource: NCIt:C27096][accessDate: 04-11-2010]
undifferentiated sarcoma
Embryonal sarcoma (morphologic abnormality)
NCI-H2107
James Malone
Ele Holloway
BTO:0002322
CD8+
An attribute of a cell e.g. CD8+
cell property
James Malone
MCC:0000352
NCI-H1299
Tomasz Adamusiak
HPAFII
James Malone
Ele Holloway
N-Methyl aspartic acid
N-Methylaspartate
InChI=1/C5H9NO4/c1-6-3(5(9)10)2-4(7)8/h3,6H,2H2,1H3,(H,7,8)(H,9,10)/t3-/m1/s1/f/h7,9H
C5H9NO4
http://www.ebi.ac.uk/efo/EFO_0002731
CN[C@H](CC(O)=O)C(O)=O
N-methyl-D-aspartic acid
An aspartic acid derivative having an N-methyl substituent and D-configuration.
CHEBI:31882
Ele Holloway
N-Methyl-D-aspartate
2-Methylamino-succinic acid
InChIKey=HOKKHZGPKSLGJE-VCKMXKKJDP
Tomasz Adamusiak
(R)-2-Methylamino-succinic acid
NMDA
Methyl aspartic acid
GRO:0005352
xylem
MAT:0000363
A complex tissue in the vascular system of higher plants that consists of vessels, tracheids, or both usually together with wood fibers and parenchyma cells, functions chiefly in conduction of water and dissolved minerals but also in support and food storage, and typically constitutes the woody element (as of a plant stem).[accessedResource: BTO:0001468][accessDate: 04-11-2010]
BTO:0001468
PO:0005352
GRO:0005352[accessedResource: BTO:0001468][accessDate: 04-11-2010]
A complex tissue in the vascular system of higher plants that consists of vessels, tracheids, or both usually together with wood fibers and parenchyma cells, functions chiefly in conduction of water and dissolved minerals but also in support and food storage, and typically constitutes the woody element (as of a plant stem).
James Malone
NC37
James Malone
Ele Holloway
protein kinase inhibitors
http://www.ebi.ac.uk/efo/EFO_0001858
CHEBI:37699
An agent that inhibits protein kinases.
protein kinase inhibitor
James Malone
CORL-105
CORL105
James Malone
Ele Holloway
peripheral nervous system
pns
Parasympathetic part of autonomic division of nervous system
One of the two divisions of the vertebrate autonomic nervous sytem. Parasympathetic nerves emerge cranially as pre-ganglionic fibres from oculomotor, facial, glossopharyngeal and vagus, and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic acetylcholine receptors. The parasympathetic system innervates, for example, salivary glands, thoracic and abdominal viscera, bladder and genitalia.
PNS - parasympathetic
ZFA:0000142
EMAPA:17270
BTO:0001833
One of the two divisions of the vertebrate autonomic nervous sytem. Parasympathetic nerves emerge cranially as pre-ganglionic fibres from oculomotor, facial, glossopharyngeal and vagus, and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic acetylcholine receptors. The parasympathetic system innervates, for example, salivary glands, thoracic and abdominal viscera, bladder and genitalia.[accessedResource: BTO:0001833][accessDate: 04-11-2010]
MAT:0000101
pns[accessedResource: ZFA:0000142][accessDate: 04-11-2010]
FMAID:9907
James Malone
Nervous structures including ganglia outside of the central nervous system.[accessedResource: ZFA:0000142][accessDate: 04-11-2010]
MA:0000223
parasympathetic nervous system
PNS - parasympathetic[accessedResource: MAT:0000101][accessDate: 04-11-2010]
peripheral nervous system[accessedResource: ZFA:0000142][accessDate: 04-11-2010]
Nervous structures including ganglia outside of the central nervous system.
TAO:0001575
EHDAA:4655
Parasympathetic part of autonomic division of nervous system[accessedResource: FMAID:9907][accessDate: 04-11-2010]
Corpus
Uterus, corpus
Uterus, corpus[accessedResource: NCIt:C12316][accessDate: 04-11-2010]
The Corpus uteri, or body of uterus, is the part of the uterus above the isthmus, comprising about two thirds of the non-pregnant organ.
corpus uteri
Uterine Body[accessedResource: NCIt:C12316][accessDate: 04-11-2010]
James Malone
Corpus[accessedResource: NCIt:C12316][accessDate: 04-11-2010]
Uterine Body
NCIt:C12316
The Corpus uteri, or body of uterus, is the part of the uterus above the isthmus, comprising about two thirds of the non-pregnant organ.[accessedResource: NCIt:C12316][accessDate: 04-11-2010]
James Malone
EV:0100075
The final section of the small intestine.[accessedResource: NCIt:C12387][accessDate: 04-11-2010]
The last division of the small intestine extending between the jejunum and large intestine.
intestinum ileum
The final section of the small intestine.
XAO:0000237
BTO:0000620
MAT:0000282
SAEL:53
FMAID:7208
The last division of the small intestine extending between the jejunum and large intestine.[accessedResource: BTO:0000620][accessDate: 04-11-2010]
NCIt:C12387
MA:0000339
ileum
intestinum ileum[accessedResource: BTO:0000620][accessDate: 04-11-2010]
truncus encephalicus
BTO:0000146
truncus encephalicus[accessedResource: BTO:0000146][accessDate: 04-11-2010]
brain stem
The part of the brain composed of the mesencephalon, pons, and medulla oblongata and connecting the spinal cord with the forebrain and cerebrum.
James Malone
Tomasz Adamusiak
The part of the brain composed of the mesencephalon, pons, and medulla oblongata and connecting the spinal cord with the forebrain and cerebrum.[accessedResource: BTO:0000146][accessDate: 04-11-2010]
NIFSTD:birnlex_1565
SNU423
James Malone
Ele Holloway
InChI=1/C12H10O2/c13-12(14)8-10-6-3-5-9-4-1-2-7-11(9)10/h1-7H,8H2,(H,13,14)/f/h13H
alpha-naphthaleneacetic acid
NAPHTHALEN-1-YL-ACETIC ACID
NAA
OC(=O)Cc1cccc2ccccc12
InChIKey=PRPINYUDVPFIRX-NDKGDYFDCS
naphthalene-1-acetic acid
1-naphthaleneacetic acid
A naphthylacetic acid that has formula C12H10O2.
1-naphthylacetic acid
C12H10O2
James Malone
Ele Holloway
naphthalen-1-ylacetic acid
CHEBI:32918
alpha-NAA
http://www.ebi.ac.uk/efo/EFO_0002394
GM12751
James Malone
A temporal mesurement of an occurrence of a metastasis measured from some defined time point.
event distant metastases
James Malone
pituitary basophilism[accessedResource: DOID:12252][accessDate: 04-11-2010]
Cushing's syndrome NOS (disorder)[accessedResource: DOID:12252][accessDate: 04-11-2010]
Cushing syndrome
Cushing's syndrome NOS
Cushing syndrome is a endocrine syndrome caused by overactivity of the adrenal cortex caused by a tumor of the pituitary gland.
Cushing's syndrome
Suprarenogenic syndrome[accessedResource: DOID:12252][accessDate: 04-11-2010]
pituitary basophilism
Cushing's syndrome[accessedResource: DOID:12252][accessDate: 04-11-2010]
DOID:12252
Cushing syndrome is a endocrine syndrome caused by overactivity of the adrenal cortex caused by a tumor of the pituitary gland.[accessedResource: DOID:12252][accessDate: 04-11-2010]
Cushing's syndrome NOS[accessedResource: DOID:12252][accessDate: 04-11-2010]
hypercorticism
Tomasz Adamusiak
Cushing's syndrome NOS (disorder)
Suprarenogenic syndrome
GeneRIF:15024701
Epithelioid Leiomyosarcoma[accessedResource: MSH:D007890][accessDate: 04-11-2010]
Leiomyosarcoma, no subtype
Leiomyosarcoma, NOS
Myxoid Leiomyosarcoma[accessedResource: MSH:D007890][accessDate: 04-11-2010]
Leiomyomosarcoma, no subtype (morphologic abnormality)[accessedResource: DOID:1967][accessDate: 04-11-2010]
SNOMEDCT:51549004
[M]Leiomyosarcoma NOS[accessedResource: SNOMEDCT:189790006][accessDate: 04-11-2010]
Leiomyosarcomas, Myxoid[accessedResource: MSH:D007890][accessDate: 04-11-2010]
GeneRIF:15051038
Leiomyosarcomas, Epithelioid[accessedResource: MSH:D007890][accessDate: 04-11-2010]
Myxoid Leiomyosarcomas
Leiomyosarcoma, no subtype (morphologic abnormality)[accessedResource: SNOMEDCT:51549004][accessDate: 04-11-2010]
Leiomyosarcomas[accessedResource: NCIt:C3158][accessDate: 04-11-2010]
A malignant smooth muscle cancer that can arise almost anywhere in the body, but is most common in the uterus, abdomen, or pelvis.
A malignant smooth muscle cancer that can arise almost anywhere in the body, but is most common in the uterus, abdomen, or pelvis.[accessedResource: DOID:1967][accessDate: 04-11-2010]
[M]Leiomyosarcoma NOS (morphologic abnormality)
A sarcoma containing large spindle cells of smooth muscle. Although it rarely occurs in soft tissue, it is common in the viscera. It is the most common soft tissue sarcoma of the gastrointestinal tract and uterus. The median age of patients is 60 years. (From Dorland, 27th ed; Holland et al., Cancer Medicine, 3d ed, p1865)[accessedResource: MSH:D007890][accessDate: 04-11-2010]
Epithelioid Leiomyosarcoma
leiomyosarcoma
GeneRIF:12177782
LMS - Leiomyosarcoma[accessedResource: SNOMEDCT:51549004][accessDate: 04-11-2010]
[M]Leiomyosarcoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189790006][accessDate: 04-11-2010]
leiomyosarcoma NOS (morphologic abnormality)
leiomyosarcoma NOS (morphologic abnormality)[accessedResource: DOID:1967][accessDate: 04-11-2010]
Leiomyosarcoma, Myxoid
Leiomyomosarcoma, no subtype (morphologic abnormality)
NCIt:C3158
[M]Leiomyosarcoma NOS
Leiomyosarcoma, no subtype (morphologic abnormality)
Leiomyosarcomas
James Malone
An uncommon, aggressive malignant smooth muscle neoplasm, usually occurring in post-menopausal women. It is characterized by a proliferation of neoplastic spindle cells. Morphologic variants include epithelioid, granular cell, inflammatory and myxoid leimyosarcomas.
A sarcoma containing large spindle cells of smooth muscle. Although it rarely occurs in soft tissue, it is common in the viscera. It is the most common soft tissue sarcoma of the gastrointestinal tract and uterus. The median age of patients is 60 years. (From Dorland, 27th ed; Holland et al., Cancer Medicine, 3d ed, p1865)
An uncommon, aggressive malignant smooth muscle neoplasm, usually occurring in post-menopausal women. It is characterized by a proliferation of neoplastic spindle cells. Morphologic variants include epithelioid, granular cell, inflammatory and myxoid leimyosarcomas.[accessedResource: NCIt:C3158][accessDate: 04-11-2010]
Leiomyosarcoma, no subtype[accessedResource: SNOMEDCT:51549004][accessDate: 04-11-2010]
GeneRIF:15051039
MSH:D007890
Leiomyosarcomas, Epithelioid
LMS - Leiomyosarcoma
GeneRIF:11759055
Leiomyosarcoma, NOS[accessedResource: SNOMEDCT:51549004][accessDate: 04-11-2010]
DOID:1967
SNOMEDCT:189790006
FBbt:00005612
embryonic esophagus
James Malone
CFT-2
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158739&type=germplasm
CS57715 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158739&type=germplasm
CS57715
James Malone
FMAID:24901
Cubital region
Cubital region[accessedResource: FMAID:24901][accessDate: 04-11-2010]
elbow
Tomasz Adamusiak
http://en.wikipedia.org/wiki/DNA_microarray#Uses_and_types
Helen Parkinson
An array consisting of DNA probes bound to a substrate
DNA array
TT
James Malone
Ele Holloway
TGMA:0000164
The walking appendages of each segment of the ventral adult external thorax.
FBbt:00004640
adult leg[accessedResource: TGMA:0000164][accessDate: 04-11-2010]
invertebrata limb
leg[accessedResource: FBbt:00004640][accessDate: 04-11-2010]
The walking appendages of each segment of the ventral adult external thorax.[accessedResource: FBbt:00004640][accessDate: 04-11-2010]
MAT:0000095
limb sensu invertebrata
invertebrate limb
adult leg
In animals, one of the paired appendages ordinarily used in locomotion and support. In insects, applied only to the three pairs of thoracic legs; in most insects, composed of the coxa, trochanter, femur, tibia, tarsus and posttarsus.
limb sensu invertebrata[accessedResource: MAT:0000095][accessDate: 04-11-2010]
TADS:0000002
leg
In animals, one of the paired appendages ordinarily used in locomotion and support. In insects, applied only to the three pairs of thoracic legs; in most insects, composed of the coxa, trochanter, femur, tibia, tarsus and posttarsus.[accessedResource: TGMA:0000164][accessDate: 04-11-2010]
James Malone
A germ layer lying remote from the surface of the embryo that gives rise to internal tissues such as gut.[accessedResource: BTO:0000800][accessDate: 04-11-2010]
hypoblast[accessedResource: BTO:0000800][accessDate: 04-11-2010]
endoderm
Jie Zheng
BTO:0000800
hypoblast
Tomasz Adamusiak
A germ layer lying remote from the surface of the embryo that gives rise to internal tissues such as gut.
FMAID:69071
Ramos
Ramos cell line is an EBV-negative, HLA class 1 positive B-lymphoblastoid cell line derived from a Burkitt lymphoma
James Malone
Ele Holloway
James Malone
antiserotonergic agents
http://www.ebi.ac.uk/efo/EFO_0001875
serotonin antagonists
Drugs that bind to but do not activate serotonin receptors, thereby blocking the actions of serotonin or serotonergic agonists.
5-HT antagonists
serotonergic antagonist
5-hydroxytryptamine antagonists
CHEBI:48279
serotonin blockaders
olfactory mucosa[accessedResource: BTO:0000108][accessDate: 04-11-2010]
nasal cavity olfactory epithelium
nasal epithelium[accessedResource: BTO:0000108][accessDate: 04-11-2010]
An epithelium located in the roof, superior conchae, and septum of the nasal cavity. It is formed by ciliated olfactory receptor cells, supporting cells and basal cells. Olfactory glands in the epithelium produce and secrete mucus which forms a layer over the epithelium. The cilia of the receptor cells protrude into the mucous layer where molecular reception with odors occurs and sensory transduction begins.
NCIt:C33203
BTO:0000108
James Malone
Sensory olfactory epithelium
olfactory epithelium
An epithelium located in the roof, superior conchae, and septum of the nasal cavity. It is formed by ciliated olfactory receptor cells, supporting cells and basal cells. Olfactory glands in the epithelium produce and secrete mucus which forms a layer over the epithelium. The cilia of the receptor cells protrude into the mucous layer where molecular reception with odors occurs and sensory transduction begins.[accessedResource: NCIt:C33203][accessDate: 04-11-2010]
FMA:64803
nasal epithelium
Olfactory sensory epithelium[accessedResource: FMA:64803][accessDate: 04-11-2010]
nasal cavity olfactory epithelium[accessedResource: BTO:0000108][accessDate: 04-11-2010]
olfactory mucosa
Pseudostratified epithelium lining the olfactory region of the nasal cavity, and containing the receptors for the sense of smell.
Pseudostratified epithelium lining the olfactory region of the nasal cavity, and containing the receptors for the sense of smell.[accessedResource: BTO:0000108][accessDate: 04-11-2010]
BTO:0001301
MAT:0000360
The tough exterior covering of a woody root or stem; specifically: the tissues outside the cambium that include an inner layer especially of secondary phloem and an outer layer of periderm.[accessedResource: BTO:0001301][accessDate: 04-11-2010]
bark
The tough exterior covering of a woody root or stem; specifically: the tissues outside the cambium that include an inner layer especially of secondary phloem and an outer layer of periderm.
James Malone
PO:0004518
InChIKey=FBOZXECLQNJBKD-SGDZJVHDDX
InChI=1/C20H22N8O5/c1-28(9-11-8-23-17-15(24-11)16(21)26-20(22)27-17)12-4-2-10(3-5-12)18(31)25-13(19(32)33)6-7-14(29)30/h2-5,8,13H,6-7,9H2,1H3,(H,25,31)(H,29,30)(H,32,33)(H4,21,22,23,26,27)/t13-/m0/s1/f/h25,29,32H,21-22H2
http://www.ebi.ac.uk/efo/EFO_0001572
N-[4-[[(2,4-diamino-6-pteridinyl)methyl]methylamino]benzoyl]-L-glutamic acid
Emtexate
Rheumatrex
James Malone
methotrexatum
Ledertrexate
metotrexato
C20H22N8O5
MTX
CN(Cc1cnc2nc(N)nc(N)c2n1)c1ccc(cc1)C(=O)N[C@@H](CCC(O)=O)C(O)=O
Trexall
A pteridine that has formula C20H22N8O5.
CHEBI:44185
4-amino-N(10)-methylpteroylglutamic acid
4-amino-10-methylfolic acid
N-[(4-{[(2,4-diaminopteridin-6-yl)methyl](methyl)amino}phenyl)carbonyl]-L-glutamic acid
methotrexate
N-(4-{[(2,4-diaminopteridin-6-yl)methyl](methyl)amino}benzoyl)-L-glutamic acid
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#irradiate[accessedResource: MO_770][accessDate: 04-11-2010]
The process of treating a material with radiation
irradiate
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#irradiate
Tomasz Adamusiak
MO_770
James Malone
Jie Zheng
NCIt:C12346
tear gland
lacrimal gland
Paired, almond-shaped exocrine glands situated superior and posterior to each orbit of the eye that produce and secrete the watery serous component of tears.
James Malone
Paired, almond-shaped exocrine glands situated superior and posterior to each orbit of the eye that produce and secrete the watery serous component of tears.[accessedResource: NCIt:C12346][accessDate: 04-11-2010]
tear gland[accessedResource: BTO:0000044][accessDate: 04-11-2010]
BTO:0000044
An acinous gland that is about the size and shape of an almond, secretes tears, and is situated laterally and superiorly to the bulb of the eye in a shallow depression on the inner surface of the frontal bone.[accessedResource: BTO:0000044][accessDate: 04-11-2010]
An acinous gland that is about the size and shape of an almond, secretes tears, and is situated laterally and superiorly to the bulb of the eye in a shallow depression on the inner surface of the frontal bone.
An Ara-C-resistant murine leukemia is a cell line.
A b117h, and a b140h are kinds of Ara-C-resistant murine leukemias.
Ara-C-resistant murine leukemia
Natural Language Generator 8th April 2010
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158846&type=germplasm
CS57822 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158846&type=germplasm
CS57822
James Malone
YCC11
James Malone
Ele Holloway
LNCAP cell[accessedResource: BTO:0001321][accessDate: 04-11-2010]
MCC:0000290
LNCAP
Human prostate carcinoma, established from the left supraclavicular lymph node metastasis from a 50-year-old man with prostate carcinoma in 1977; cells were described to be androgen-sensitive.[accessedResource: BTO:0001321][accessDate: 04-11-2010]
LNCAP cell
Ele Holloway
James Malone
BTO:0001321
Human prostate carcinoma, established from the left supraclavicular lymph node metastasis from a 50-year-old man with prostate carcinoma in 1977; cells were described to be androgen-sensitive.
BTK deficiency
Bruton's X-Linked Agammaglobulinemia
Bruton's agammaglobulinaemia[accessedResource: DOID:14179][accessDate: 04-11-2010]
X-linked agammaglobulinemia. An immunodeficiency state characterized (usually) by profoundly low concentrations of serum immunoglobulins of all classes, although occasionally significant amounts of one or more isotypes can be found. The fundamental defect in XLA affects early lineage B cells.
Bruton's Sex-Linked Agammaglobulinemia
Bruton's Sex-Linked Agammaglobulinemia[accessedResource: NCIt:C3822][accessDate: 04-11-2010]
BTK deficiency[accessedResource: DOID:14179][accessDate: 04-11-2010]
A B cell deficiency that is caused by a mutation in the Bruton's tyrosine kinase (BTK) gene on the X chromosome resulting in X-linked agammaglobulinemia type 1, which is an immunodeficiency characterized by the failure to produce mature B lymphocytes, and associated with a failure of Ig heavy chain rearrangement.
Bruton agammaglobulinemia tyrosine kinase deficiency[accessedResource: DOID:14179][accessDate: 04-11-2010]
X-linked agammaglobulinemia
Bruton agammaglobulinemia tyrosine kinase deficiency
Bruton's X-Linked Agammaglobulinemia[accessedResource: NCIt:C3822][accessDate: 04-11-2010]
Bruton's type agammaglobulinemia[accessedResource: DOID:14179][accessDate: 04-11-2010]
Bruton's type agammaglobulinemia
X-linked agammaglobulinemia (disorder)[accessedResource: DOID:14179][accessDate: 04-11-2010]
Tomasz Adamusiak
Bruton's agammaglobulinaemia
A B cell deficiency that is caused by a mutation in the Bruton's tyrosine kinase (BTK) gene on the X chromosome resulting in X-linked agammaglobulinemia type 1, which is an immunodeficiency characterized by the failure to produce mature B lymphocytes, and associated with a failure of Ig heavy chain rearrangement.[accessedResource: DOID:14179][accessDate: 04-11-2010]
X-linked agammaglobulinemia. An immunodeficiency state characterized (usually) by profoundly low concentrations of serum immunoglobulins of all classes, although occasionally significant amounts of one or more isotypes can be found. The fundamental defect in XLA affects early lineage B cells.[accessedResource: NCIt:C3822][accessDate: 04-11-2010]
X-linked agammaglobulinemia (disorder)
DOID:14179
NCIt:C3822
NCIt:C14165
Being approximately average or within certain limits; conforming with or constituting a norm or standard or level or type or social norm.
A normal class is a special type of disease factor used as a control, that is, one which is not known to be affected by any disease; being approximately average or within certain limits; conforming with or constituting a norm or standard or level or type or social norm.
Being approximately average or within certain limits; conforming with or constituting a norm or standard or level or type or social norm.[accessedResource: NCIt:C14165][accessDate: 04-11-2010]
normal
James Malone
SW403
James Malone
Ele Holloway
cardiotonic drugs
http://www.ebi.ac.uk/efo/EFO_0001866
CHEBI:38147
A drug that has a strengthening effect on the heart or that can increase cardiac output.
cardiotonic drug
James Malone
Ele Holloway
A Jiyoye is a cell line.
A Jiyoye is bearer of a Burkitt's lymphoma.
Natural Language Generator 8th April 2010
James Malone
Jiyoye
Digit
true
Duplicated class, use digit EFO_0000881
obsolete_digit
A finger or toe in human beings or corresponding part in other vertebrates.[accessedResource: NCIt:C40186][accessDate: 10-05-2010]
NCIt:C40186
A finger or toe in human beings or corresponding part in other vertebrates.
Digital
Digital[accessedResource: NCIt:C40186][accessDate: 10-05-2010]
Digit[accessedResource: NCIt:C40186][accessDate: 10-05-2010]
adult salivary gland
The glands of the oral cavity whose combined secretion constitutes the saliva.[accessedResource: BTO:0001203][accessDate: 04-11-2010]
FMAID:9597
A pair of salivary glands is present in the thorax, just above the forelegs and flanking the oesophagus. In both sexes of most species each gland normally consists of three lobes, two lateral and one median.
TGMA:0001804
EHDAA:7987
salivary gland
BTO:0001203
James Malone
TADS:0000119
A pair of salivary glands is present in the thorax, just above the forelegs and flanking the oesophagus. In both sexes of most species each gland normally consists of three lobes, two lateral and one median.[accessedResource: TGMA:0001804][accessDate: 04-11-2010]
SAEL:92
MAT:0000079
FBbt:00005382
The glands of the oral cavity whose combined secretion constitutes the saliva.
EMAPA:17751
MA:0000346
adult salivary gland[accessedResource: TGMA:0001804][accessDate: 04-11-2010]
Lobular organ the parenchyma of which consists of glandular acini which communicate the oral cavity. Examples: parotid gland, sublingual gland, lingual salivary gland.
ZFS:0000019
gastrula shield
James Malone
A biopterin that has formula C9H15N5O3.
Tetrahydrobiopterin
C9H15N5O3
Ele Holloway
CHEBI:15372
CC(O)C(O)C1CNc2nc(N)[nH]c(=O)c2N1
http://www.ebi.ac.uk/efo/EFO_0002397
5,6,7,8-tetrahydrobiopterin
2-amino-6-(1,2-dihydroxypropyl)-5,6,7,8-tetrahydropteridin-4(3H)-one
2-Amino-6-(1,2-dihydroxypropyl)-5,6,7,8-tetrahydoro-4(1H)-pteridinone
InChIKey=FNKQXYHWGSIFBK-JFOIYUNLCJ
InChI=1/C9H15N5O3/c1-3(15)6(16)4-2-11-7-5(12-4)8(17)14-9(10)13-7/h3-4,6,12,15-16H,2H2,1H3,(H4,10,11,13,14,17)/f/h11,14H,10H2
BH4
James Malone
InChIKey=QDLHCMPXEPAAMD-QAIWCSMKBP
James Malone
wortmannin
InChI=1/C23H24O8/c1-10(24)30-13-7-22(2)12(5-6-14(22)25)16-18(13)23(3)15(9-28-4)31-21(27)11-8-29-20(17(11)23)19(16)26/h8,12-13,15H,5-7,9H2,1-4H3/t12-,13+,15+,22-,23-/m0/s1
Ele Holloway
C23H24O8
http://www.ebi.ac.uk/efo/EFO_0002494
An organic heteropentacyclic compound that has formula C23H24O8.
[H][C@@]12CCC(=O)[C@@]1(C)C[C@@H](OC(C)=O)C1=C2C(=O)c2occ3C(=O)O[C@H](COC)[C@@]1(C)c23
Wartmannin
(1S,6bR,9aS,11R,11bR)-9a,11b-dimethyl-1-[(methyloxy)methyl]-3,6,9-trioxo-1,6,6b,7,8,9,9a,10,11,11b-decahydro-3H-furo[4,3,2-de]indeno[4,5-h]isochromen-11-yl acetate
CHEBI:52289
James Malone
BTO:0001580
FMAID:19325
EMAPA:19088
FBbt:00004965
ductus ejaculatorius[accessedResource: BTO:0001580][accessDate: 04-11-2010]
Either of the paired ducts in the human male that are formed by the junction of the duct from the seminal vesicle with the vas deferens, pass through the prostate, and open into or close to the prostatic utricle.[accessedResource: BTO:0001580][accessDate: 04-11-2010]
TADS:0000489
MAT:0000170
Either of the paired ducts in the human male that are formed by the junction of the duct from the seminal vesicle with the vas deferens, pass through the prostate, and open into or close to the prostatic utricle.
ejaculatory duct
ductus ejaculatorius
TAO:0001573
Ganglion which is located in the trunk.[accessedResource: TAO:0001573][accessDate: 04-11-2010]
WBbt:0005332
Ganglion which is located in the trunk.
James Malone
trunk ganglion
body ganglion
trunk ganglion[accessedResource: TAO:0001573][accessDate: 04-11-2010]
GM12873
James Malone
true
volume percentage
% (v/v)
A dimensionless concentration unit which denotes the volume of the solute in mL per 100 mL of the resulting solution.
volume percent
LC2/AD
James Malone
BTO:0001295
The sclerotized skull-like part of the head.[accessedResource: TGMA:0000003][accessDate: 04-11-2010]
EHDAA:6029
Skeletal system of head[accessedResource: FMAID:87596][accessDate: 04-11-2010]
MAT:0000340
cranial skeleton[accessedResource: TAO:0000737][accessDate: 04-11-2010]
Skeletal system that is part of the head, including the splanchnocranium, chondrocranium, and dermatocranium.[accessedResource: ZFA:0000737][accessDate: 04-11-2010]
The sclerotized skull-like part of the head.
skull[accessedResource: TAO:0000737][accessDate: 04-11-2010]
cranium
James Malone
head capsule
FMAID:87596
EMAPA:17680
TAO:0000737
skeletal system of head
1: The skull of a vertebrate.n2: The portion of the skull enclosing the brain; the braincase.[accessedResource: BTO:0001295][accessDate: 04-11-2010]
cranial skeleton
Kopfkapsel[accessedResource: TGMA:0000003][accessDate: 04-11-2010]
ZFA:0000737
TGMA:0000003
head capsule[accessedResource: TGMA:0000003][accessDate: 04-11-2010]
Kopfkapsel
craniofacial skeleton bone
1: The skull of a vertebrate.n2: The portion of the skull enclosing the brain; the braincase.
Skeletal system which is part of the skull, including the splanchnocranium, chondrocranium, and dermatocranium.[accessedResource: TAO:0000737][accessDate: 04-11-2010]
Skeletal system that is part of the head, including the splanchnocranium, chondrocranium, and dermatocranium.
MA:0000316
adult cranium
Skeletal system which is part of the skull, including the splanchnocranium, chondrocranium, and dermatocranium.
skull
adult cranium[accessedResource: TGMA:0000003][accessDate: 04-11-2010]
BTO:0000669
embryonic cell line
Tomasz Adamusiak
hormone role
James Malone
http://www.ebi.ac.uk/efo/EFO_0001894
nutraceutical
CHEBI:50733
Dietary Supplement
James Malone
Food Supplementation
Nutritional supplement
A product in capsule, tablet or liquid form that provide essential nutrients, such as a vitamin, an essential mineral, a protein, an herb, or similar nutritional substance.
Y. Apidianakis, M.N. Mindrinos, W. Xiao, G.W. Lau, R.L. Baldini, R.W. Davis and L.G. Rahme, Profiling early infection responses: Pseudomonas aeruginosa eludes host defenses by suppressing antimicrobial peptide gene expression, Proc. Natl. Acad. Sci. USA 102 (2005), pp. 2573-2578
A Pseudomonas aeruginosa CF5 infection is a Pseudomonas infection of strain CF5.
Pseudomonas aeruginosa CF5 infection
James Malone
A typically paired male reproductive gland that produces sperm and that in most mammals is contained within the scrotum at sexual maturity.[accessedResource: BTO:0001363][accessDate: 04-11-2010]
male gonad
SAEL:93
BTO:0001363
A typically paired male reproductive gland that produces sperm and that in most mammals is contained within the scrotum at sexual maturity.
testiculus
James Malone
orchis
testicle
orchis[accessedResource: BTO:0001363][accessDate: 04-11-2010]
testicle[accessedResource: BTO:0001363][accessDate: 04-11-2010]
testis
WBbt:0005321
testiculus[accessedResource: BTO:0001363][accessDate: 04-11-2010]
MA:0002765
A carrier or inert medium used as a solvent (or diluent) in which some compound is formulated and or administered.
vehicle
James Malone
A brain structure developmental tissue is a nervous system developmental tissue from which mature, fully developed brain structures will emerge during growth of an organism.
brain structure developmental tissue
James Malone
MAT:0000487
dorsal fin
Dorsal is a geometric modifier describing parts of an organism relating to or situated near or on the back. For example, dorsal fin.
dorsal
James Malone
Chronic gastritis NOS
chronic gastritis (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
Other specified gastritis (disorder)
Other specified gastritis, without mention of hemorrhage
NCIt:C26929
acute gastritis
GASTRITIS HEMORRHAGIC
GeneRIF:11642721
Gastritis [Ambiguous]
acute gastritis (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
SNOMEDCT:8493009
Other specified gastritis NOS (disorder)
Erosive gastropathy (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
Other specified gastritis, without mention of hemorrhage[accessedResource: DOID:4032][accessDate: 04-11-2010]
chronic gastritis
SNOMEDCT:196736000
acute haemorrhagic gastritis[accessedResource: DOID:4032][accessDate: 04-11-2010]
acute gastritis with hemorrhage[accessedResource: DOID:4032][accessDate: 04-11-2010]
Gastritis (disorder)
Chronic gastritis, NOS[accessedResource: SNOMEDCT:8493009][accessDate: 04-11-2010]
acute gastritis (disorder)
GeneRIF:12738381
Gastritis unspecified (disorder)
Gastritis (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
Erosive gastropathy (disorder)
acute hemorrhagic gastritis [dup] (disorder)
acute hemorrhagic gastritis (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
Other specified gastritis, with hemorrhage[accessedResource: DOID:4032][accessDate: 04-11-2010]
Other specified gastritis[accessedResource: DOID:4032][accessDate: 04-11-2010]
Chronic gastritis NOS (disorder)[accessedResource: SNOMEDCT:196736000][accessDate: 04-11-2010]
CG - Chronic gastritis
Gastritis [Ambiguous][accessedResource: DOID:4032][accessDate: 04-11-2010]
Idiopathic erosive/hemorrhagic gastritis (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
Idiopathic erosive/hemorrhagic gastritis (disorder)
Other specified gastritis NOS (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
acute gastric mucosal erosion (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
Erosive Gastritis
gastritis
GeneRIF:15104366
Other specified gastritis (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
DOID:4032
acute haemorrhagic gastritis
GASTRITIS HEMORRHAGIC[accessedResource: DOID:4032][accessDate: 04-11-2010]
Gastritis unspecified (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
acute Gastritis[accessedResource: DOID:4032][accessDate: 04-11-2010]
acute hemorrhagic gastritis (disorder)
acute gastric mucosal erosion (disorder)
Chronic gastritis (disorder)
acute gastritis, without mention of hemorrhage[accessedResource: DOID:4032][accessDate: 04-11-2010]
Other specified gastritis, with hemorrhage
acute hemorrhagic gastritis [dup] (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
Erosive Gastritis[accessedResource: DOID:4032][accessDate: 04-11-2010]
CG - Chronic gastritis[accessedResource: SNOMEDCT:8493009][accessDate: 04-11-2010]
James Malone
GeneRIF:12508351
gastritis[accessedResource: DOID:4032][accessDate: 04-11-2010]
acute gastritis without mention of hemorrhage
acute gastritis with hemorrhage
Chronic gastritis NOS (disorder)
Other specified gastritis
GeneRIF:15962365
RGD:1578703
Syracuse Low Avoidance
James Malone
Natural Language Generator 8th April 2010
James Malone
A BDCM is a cell line.
A BDCM is all of the following: something that is bearer of an acute myeloid leukemia, something that derives from a homo sapiens, and something that derives from a lymphatic system.
BDCM
Ele Holloway
The probabilty of continuance of life or existence especially under adverse conditions; Probably need a parent survival metric or similar
survival probability
James Malone
microspore
A haploid (1n) spore developing into a male gametophyte in heterosporous plants; the uninucleate pollen grain in seed plants.
The structure into which a haploid microspore develops; contains a halpoid tube nucleus and two haploid sperm nuclei at maturity.[accessedResource: BTO:0001097][accessDate: 04-11-2010]
GRO:0005650
pollen grain
GRO:0005650[accessedResource: BTO:0001097][accessDate: 04-11-2010]
PO:0020097
BTO:0001097
microspore[accessedResource: CL:0000252][accessDate: 04-11-2010]
James Malone
MAT:0000216
The structure into which a haploid microspore develops; contains a halpoid tube nucleus and two haploid sperm nuclei at maturity.
pollen grain[accessedResource: BTO:0001097][accessDate: 04-11-2010]
generative cell (male)[accessedResource: MAT:0000216][accessDate: 04-11-2010]
CL:0000252
pollen
A haploid (1n) spore developing into a male gametophyte in heterosporous plants; the uninucleate pollen grain in seed plants.[accessedResource: CL:0000252][accessDate: 04-11-2010]
generative cell (male)
Tomasz Adamusiak
Dorsal imaginal disc of the mesothorax. Precursor of dorsal mesothoracic structures of the adult including the postnotum, scutum, scutellum, wing, wing hinge and part of the notal plura.
dorsal mesothoracic disc
wing disc[accessedResource: FBbt:00001778][accessDate: 04-11-2010]
Dorsal imaginal disc of the mesothorax. Precursor of dorsal mesothoracic structures of the adult including the postnotum, scutum, scutellum, wing, wing hinge and part of the notal plura.[accessedResource: FBbt:00001778][accessDate: 04-11-2010]
wing disc
James Malone
FBbt:00001778
C57BL/6J
C57BL6J[accessedResource: NIFSTD:birnlex_393][accessDate: 04-11-2010]
http://phenome.jax.org/db/q?rtn=strains/details&strainid=7
NIFSTD:birnlex_393
Tomasz Adamusiak
C57BL/6J is a mouse strain as described in Jackson Laboratory http://phenome.jax.org/db/q?rtn=strains/details&strainid=7
James Malone
C57BL6J
http://en.wikipedia.org/wiki/Tiling_array
Helen Parkinson
genome tiling array
A tiling array is an array which has short fragments of nucleic acid immobilized on a substrate. These are designed to cover the whole genome of the target species. Tiling arrays are used to determine genome binding in ChIP assays or to identify transcribed regions.
tiling array
TAO:0000117
The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm. Kimmel et al, 1995.
hypoblast
mesendoderm
The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm.
ZFA:0000117
James Malone
The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm. Kimmel et al, 1995.[accessedResource: TAO:0000117][accessDate: 04-11-2010]
The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm.[accessedResource: ZFA:0000117][accessDate: 04-11-2010]
mesendoderm[accessedResource: ZFA:0000117][accessDate: 04-11-2010]
inhibiteur
inhibidor
http://www.ebi.ac.uk/efo/EFO_0001898
A substance that diminishes the rate of a chemical reaction.
inhibitor
James Malone
FBbt:00005476
dorsal apodeme specific anlage
James Malone
hemopoietic progenitor cell
hematopoietic multipotent progenitor cell[accessedResource: CL:0000837][accessDate: 04-11-2010]
hemopoietic progenitor cell[accessedResource: CL:0000837][accessDate: 04-11-2010]
MPP
A hematopoietic multipotent progenitor cell is multipotent, but not capable of long-term self-renewal. These cells are characterized as lacking lineage cell surface markers and being CD34-positive in both mice and humans.[accessedResource: CL:0000837][accessDate: 04-11-2010]
Tomasz Adamusiak
Jie Zheng
A progenitor cell of any hematopoietic lineage, potentially multipotent.
MPP[accessedResource: CL:0000837][accessDate: 04-11-2010]
CL:0000837
hematopoietic multipotent progenitor cell
hematopoietic progenitor cell
A hematopoietic multipotent progenitor cell is multipotent, but not capable of long-term self-renewal. These cells are characterized as lacking lineage cell surface markers and being CD34-positive in both mice and humans.
RCHACV
James Malone
Ele Holloway
true
NCIt:C52733
Accumbens Nucleus
obsolete_accumbens nucleus
duplicated use class EFO_0000906
GeneRIF:12855673
GeneRIF:15861005
GeneRIF:14575314
GeneRIF:15193812
Infarction of heart
GeneRIF:12482844
GeneRIF:14986172
GeneRIF:15140581
GeneRIF:12649084
GeneRIF:11816707
GeneRIF:14652632
GeneRIF:11861414
GeneRIF:11834491
GeneRIF:12456499
GeneRIF:14993131
MI[accessedResource: NCIt:C27996][accessDate: 04-11-2010]
Infarctions, Myocardial[accessedResource: MSH:D009203][accessDate: 04-11-2010]
GeneRIF:12958147
GeneRIF:11994975
GeneRIF:15009479
GeneRIF:12081989
GeneRIF:15808838
GeneRIF:14770184
GeneRIF:12426569
GeneRIF:12697693
GeneRIF:15170085
GeneRIF:12165563
Myocardial Infarct[accessedResource: MSH:D009203][accessDate: 04-11-2010]
GeneRIF:15175818
GeneRIF:12535745
GeneRIF:14656915
GeneRIF:15520319
GeneRIF:15458948
GeneRIF:15297380
GeneRIF:14646971
Heart attack, NOS
GeneRIF:15931235
GeneRIF:15467919
GeneRIF:15665106
GeneRIF:12362496
Cardiac infarction
GeneRIF:12819031
GeneRIF:14575298
GeneRIF:12818419
GeneRIF:12070000
GeneRIF:15678273
Myocardial infarction, NOS[accessedResource: SNOMEDCT:22298006][accessDate: 04-11-2010]
Cardiac infarction, NOS[accessedResource: SNOMEDCT:22298006][accessDate: 04-11-2010]
GeneRIF:11926892
Myocardial infarction (disorder)
GeneRIF:11903359
MSH:D009203
Infarctions, Myocardial
GeneRIF:15081319
GeneRIF:12746412
Infarction of heart, NOS
Gross necrosis of the myocardium, as a result of interruption of the blood supply to the area, as in coronary thrombosis.
MI - Myocardial infarction[accessedResource: SNOMEDCT:22298006][accessDate: 04-11-2010]
GeneRIF:12969888
GeneRIF:12452318
GeneRIF:16186408
Infarcts, Myocardial
GeneRIF:16102106
GeneRIF:12771003
NECROSIS of the MYOCARDIUM caused by an obstruction of the blood supply to the heart (CORONARY CIRCULATION).[accessedResource: MSH:D009203][accessDate: 04-11-2010]
GeneRIF:15883205
GeneRIF:14729404
NCIt:C27996
Cardiac infarction[accessedResource: SNOMEDCT:22298006][accessDate: 04-11-2010]
GeneRIF:15699461
GeneRIF:12081984
GeneRIF:15298543
GeneRIF:15583729
GeneRIF:12663371
GeneRIF:14966366
GeneRIF:11858502
GeneRIF:15213208
GeneRIF:15466927
myocardial infarction
GeneRIF:15075297
GeneRIF:14631138
GeneRIF:12011770
GeneRIF:12600920
GeneRIF:15226628
GeneRIF:15376321
GeneRIF:15533863
GeneRIF:12514664
GeneRIF:15319210
GeneRIF:15129282
GeneRIF:15998711
GeneRIF:15681698
Myocardial infarction NOS
GeneRIF:15234427
GeneRIF:16159602
GeneRIF:14517168
GeneRIF:15269835
GeneRIF:15793582
GeneRIF:14530192
GeneRIF:16116695
GeneRIF:12760310
GeneRIF:12745799
Cardiac infarction, NOS
GeneRIF:14717963
GeneRIF:12535806
GeneRIF:12483464
GeneRIF:12395208
GeneRIF:12855229
GeneRIF:12615902
GeneRIF:12891167
DOID:5844
GeneRIF:11871391
GeneRIF:15842378
GeneRIF:15616022
GeneRIF:12898814
SNOMEDCT:22298006
GeneRIF:14871556
GeneRIF:12805025
GeneRIF:15907784
GeneRIF:15201542
GeneRIF:14500723
Infarction of heart[accessedResource: SNOMEDCT:22298006][accessDate: 04-11-2010]
Myocardial Infarct
MI, MYOCARDIAL INFARCTION
GeneRIF:15466009
Attack - heart
GeneRIF:15533859
GeneRIF:15292372
NECROSIS of the MYOCARDIUM caused by an obstruction of the blood supply to the heart (CORONARY CIRCULATION).
Heart attack, NOS[accessedResource: SNOMEDCT:22298006][accessDate: 04-11-2010]
GeneRIF:11999647
GeneRIF:12714332
Myocardial Infarcts[accessedResource: MSH:D009203][accessDate: 04-11-2010]
GeneRIF:15764682
GeneRIF:14556196
MI
GeneRIF:12844196
GeneRIF:15140146
GeneRIF:14983241
GeneRIF:12860906
GeneRIF:15210453
GeneRIF:15576653
GeneRIF:15754085
Gross necrosis of the myocardium, as a result of interruption of the blood supply to the area, as in coronary thrombosis.[accessedResource: NCIt:C27996][accessDate: 04-11-2010]
GeneRIF:16087130
GeneRIF:12430844
GeneRIF:14962947
GeneRIF:15256074
GeneRIF:12200370
Myocardial infarction (disorder)[accessedResource: DOID:5844][accessDate: 04-11-2010]
GeneRIF:12824724
GeneRIF:12392996
GeneRIF:12514663
GeneRIF:15763077
GeneRIF:14600184
GeneRIF:14581297
heart attack[accessedResource: DOID:5844][accessDate: 04-11-2010]
GeneRIF:14645853
GeneRIF:15150438
GeneRIF:12469616
GeneRIF:14693682
GeneRIF:11934213
GeneRIF:15539626
GeneRIF:15978110
GeneRIF:15949932
GeneRIF:15520258
GeneRIF:12237129
GeneRIF:12719858
GeneRIF:16276010
James Malone
GeneRIF:12855940
Infarction of heart, NOS[accessedResource: SNOMEDCT:22298006][accessDate: 04-11-2010]
GeneRIF:11820456
GeneRIF:12853162
GeneRIF:12226742
GeneRIF:14653443
http://jaxmice.jax.org/strain/009259.html
ILSXISS7/TejJ
Tomasz Adamusiak
YCC6
James Malone
Ele Holloway
WBbt:0005440
MAT:0000341
pharyngeal nervous system
James Malone
Acetylcysteine
(R)-mercapturic acid
(2R)-2-acetylamino-3-sulfanylpropanoic acid
acetylcysteinum
N-acetyl-L-cysteine
C5H9NO3S
N-acetylcysteine
CHEBI:28939
CC(=O)N[C@@H](CS)C(O)=O
(R)-2-acetylamino-3-mercaptopropanoic acid
An acetylcysteine that has formula C5H9NO3S.
L-acetylcysteine
The N-acetylated derivative of natural amino acid L-cysteine.
mercapturic acid
L-alpha-acetamido-beta-mercaptopropionic acid
http://www.ebi.ac.uk/efo/EFO_0001576
acetilcisteina
InChI=1/C5H9NO3S/c1-3(7)6-4(2-10)5(8)9/h4,10H,2H2,1H3,(H,6,7)(H,8,9)/t4-/m0/s1/f/h6,8H
InChIKey=PWKSKIMOESPYIA-JVBVHTJODB
http://www.arabidopsis.org/servlets/TairObject?id=1005158630&type=germplasm
CS57606 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158630&type=germplasm
CS57606
James Malone
MO_807
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pathogenicity_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pathogenicity_design[accessedResource: MO_807][accessDate: 04-11-2010]
pathogenicity design
Tomasz Adamusiak
NCI Metathesaurus http://ncimeta.nci.nih.gov/MetaServlet/ResultServlet?cui=C0019247 Date Accessed: 30th October 2007
Genetic Diseases are diseases in which inherited genes predispose to increased risk. The genetic disorders associated with cancer often result from an alteration or mutation in a single gene. The diseases range from rare dominant cancer family syndrome to familial tendencies in which low-penetrance genes may interact with other genes or environmental factors to induce cancer. Research may involve clinical, epidemiologic, and laboratory studies of persons, families, and populations at high risk of these disorders.
genetic disorder
James Malone
James Malone
tiling path by array
An assay in which a tiling path array (where probes are arrayed covering target regions e.g. a genome or chromosome at very high density) is used to identify transcribed regions.
ArrayExpress production team
GM07000
James Malone
I am trying to determine the difference between a process and a behaviour. Is behaviour dancing any different from the process dancing?
Fixed action pattern courtship behaviour in Drosophila. Forager behaviour in honey bees.
behaviour
The actions or reactions of an object or organism, usually in relation to the environment or surrounding world of stimuli. E.g. Fixed action pattern courtship behaviour in Drosophila. Forager behaviour in honey bees.
behavior
James Malone
GeneRIF:12707933
GeneRIF:14623370
GeneRIF:12643442
GeneRIF:15211634
GeneRIF:15194506
GeneRIF:15337252
GeneRIF:12960753
[X]Schizophrenia, unspecified (disorder)
GeneRIF:16005437
Unspecified schizophrenia[accessedResource: SNOMEDCT:191528006][accessDate: 04-11-2010]
GeneRIF:15768050
GeneRIF:12762588
GeneRIF:12911617
GeneRIF:15820319
Other specified types of schizophrenia, subchronic state
GeneRIF:16176390
Other specified types of schizophrenia, chronic state with acute exacerbation[accessedResource: ICD9:295.84][accessDate: 04-11-2010]
GeneRIF:16139171
GeneRIF:12707930
GeneRIF:14572619
GeneRIF:12210271
GeneRIF:12851458
GeneRIF:15670788
GeneRIF:15707951
GeneRIF:15719395
GeneRIF:15248869
GeneRIF:16027740
GeneRIF:12476325
GeneRIF:15340354
GeneRIF:12111645
GeneRIF:12815739
GeneRIF:12824740
Schizophrenia, NOS
ICD9:295.90
GeneRIF:12808428
GeneRIF:15739191
GeneRIF:15768049
GeneRIF:11880198
GeneRIF:12145742
GeneRIF:15276698
GeneRIF:12497607
GeneRIF:14767724
GeneRIF:12555232
GeneRIF:15838535
GeneRIF:14960334
GeneRIF:15364420
GeneRIF:15318035
GeneRIF:15756053
GeneRIF:15124027
Schizophrenia NOS[accessedResource: SNOMEDCT:191579000][accessDate: 04-11-2010]
GeneRIF:14623375
A major psychotic disorder characterized by abnormalities in the perception or expression of reality. It affects the cognitive and psychomotor functions. Common clinical signs and symptoms include delusions, hallucinations, disorganized thinking, and retreat from reality.
GeneRIF:12399140
GeneRIF:11922883
Other specified types of schizophrenia, chronic state[accessedResource: ICD9:295.82][accessDate: 04-11-2010]
GeneRIF:15041036
GeneRIF:14623369
Unspecified schizophrenia, unspecified state[accessedResource: ICD9:295.90][accessDate: 04-11-2010]
GeneRIF:11986986
GeneRIF:12746393
GeneRIF:12364586
GeneRIF:14684836
Schizophrenic disorders (disorder)[accessedResource: SNOMEDCT:191526005][accessDate: 04-11-2010]
ICD9:295.82
GeneRIF:15522253
SCHIZO NEC-CHR/EXACERB
GeneRIF:12624948
GeneRIF:12782967
GeneRIF:14699440
GeneRIF:11840505
GeneRIF:12874601
GeneRIF:11959925
GeneRIF:16044173
Other specified types of schizophrenia, subchronic state with acute exacerbation[accessedResource: ICD9:295.83][accessDate: 04-11-2010]
GeneRIF:15231749
GeneRIF:15211624
GeneRIF:11979062
GeneRIF:15261699
GeneRIF:15184063
GeneRIF:14973229
Other specified types of schizophrenia, chronic state
GeneRIF:12799614
GeneRIF:16139173
GeneRIF:14532331
SCHIZOPHRENIA NOS-UNSPEC[accessedResource: ICD9:295.90][accessDate: 04-11-2010]
GeneRIF:12149917
GeneRIF:12207142
Schizophrenia NOS (disorder)
GeneRIF:15532024
SCHIZOPHRENIA NOS-UNSPEC
SCHIZO NEC-CHR/EXACERB[accessedResource: ICD9:295.84][accessDate: 04-11-2010]
GeneRIF:15545978
GeneRIF:15781144
GeneRIF:14684465
GeneRIF:15184103
GeneRIF:15793701
GeneRIF:12363390
GeneRIF:16223700
GeneRIF:15705354
GeneRIF:15913960
GeneRIF:14732600
GeneRIF:15961543
Other specified types of schizophrenia, in remission
GeneRIF:15564895
GeneRIF:12921913
Unspecified schizophrenia, subchronic state with acute exacerbation
Tomasz Adamusiak
GeneRIF:12627459
GeneRIF:12082567
GeneRIF:15362566
GeneRIF:12724619
GeneRIF:12454527
GeneRIF:12496953
GeneRIF:11807413
GeneRIF:12815737
Unspecified schizophrenia, subchronic state with acute exacerbation[accessedResource: ICD9:295.93][accessDate: 04-11-2010]
GeneRIF:15162166
GeneRIF:14699426
SCHIZO NEC-SUBCHR/EXACER[accessedResource: ICD9:295.83][accessDate: 04-11-2010]
GeneRIF:15913964
GeneRIF:12815738
GeneRIF:15363474
GeneRIF:14755437
GeneRIF:16056147
GeneRIF:16046005
GeneRIF:12915235
GeneRIF:15953671
GeneRIF:15917270
GeneRIF:14729827
SCHIZOPHRENIA NEC-REMISS[accessedResource: ICD9:295.85][accessDate: 04-11-2010]
GeneRIF:11959426
ICD9:295.9
GeneRIF:15318034
GeneRIF:12476323
GeneRIF:11920853
ICD9:295.80
GeneRIF:15121479
Schizophrenic disorders
GeneRIF:15338334
GeneRIF:15211626
GeneRIF:12223255
GeneRIF:16026766
GeneRIF:15274031
GeneRIF:15091315
GeneRIF:11986985
GeneRIF:12090821
GeneRIF:15647480
GeneRIF:15653269
GeneRIF:15303101
GeneRIF:12808432
GeneRIF:15329799
GeneRIF:15882913
GeneRIF:11803524
GeneRIF:15197397
GeneRIF:16044171
GeneRIF:15318033
GeneRIF:15671176
SNOMEDCT:192327003
GeneRIF:15289817
GeneRIF:15305151
GeneRIF:15522255
GeneRIF:12884975
GeneRIF:12210277
Schizophrenia NOS (disorder)[accessedResource: SNOMEDCT:191579000][accessDate: 04-11-2010]
GeneRIF:11840504
GeneRIF:15274030
GeneRIF:12082558
GeneRIF:14569272
GeneRIF:15660667
GeneRIF:11803525
GeneRIF:14744462
GeneRIF:12402217
SCHIZO NOS-SUBCHR/EXACER[accessedResource: ICD9:295.93][accessDate: 04-11-2010]
GeneRIF:15219469
GeneRIF:15098000
GeneRIF:12634474
GeneRIF:15820318
GeneRIF:11104840
SCHIZO NOS-CHR/EXACERB
GeneRIF:14732601
SCHIZOPHRENIA NEC-SUBCHR
GeneRIF:15694262
GeneRIF:11803513
GeneRIF:15091314
GeneRIF:15631889
GeneRIF:14732589
SCHIZOPHRENIA NEC-UNSPEC[accessedResource: ICD9:295.80][accessDate: 04-11-2010]
GeneRIF:14754787
GeneRIF:12149916
GeneRIF:12425946
GeneRIF:15870291
GeneRIF:12140778
GeneRIF:15318028
GeneRIF:15630410
GeneRIF:12812986
GeneRIF:14985387
GeneRIF:15774266
GeneRIF:14755440
GeneRIF:12815736
Schizophrenia (disorder)
GeneRIF:12109966
GeneRIF:12270648
GeneRIF:15939883
GeneRIF:15820227
NCIt:C3362
GeneRIF:12799619
GeneRIF:12506198
GeneRIF:15900221
ICD9:295
GeneRIF:11891283
GeneRIF:11840510
GeneRIF:15858820
GeneRIF:12815735
GeneRIF:15449241
GeneRIF:15167695
SNOMEDCT:191526005
ICD9:295.81
Other specified types of schizophrenia, subchronic state with acute exacerbation
ICD9:295.8
GeneRIF:12474144
GeneRIF:15998189
GeneRIF:12097806
Other specified types of schizophrenia, subchronic state[accessedResource: ICD9:295.81][accessDate: 04-11-2010]
GeneRIF:12098102
Other specified types of schizophrenia, unspecified state
GeneRIF:11952921
GeneRIF:14647391
GeneRIF:15927374
GeneRIF:15940296
Dementia Praecox[accessedResource: NIFSTD:birnlex_2104][accessDate: 04-11-2010]
GeneRIF:15465982
GeneRIF:14623371
GeneRIF:12691788
GeneRIF:12605097
Schizophrenic Disorder[accessedResource: NIFSTD:birnlex_2104][accessDate: 04-11-2010]
GeneRIF:15007393
GeneRIF:16084002
GeneRIF:12192610
GeneRIF:15841096
GeneRIF:15737668
schizophrenia-1[accessedResource: DOID:5419][accessDate: 04-11-2010]
GeneRIF:15038995
GeneRIF:12082559
GeneRIF:15219467
GeneRIF:12648734
ICD9:295.85
ICD9:295.94
DOID:5419
GeneRIF:15219675
GeneRIF:15576061
GeneRIF:16039051
GeneRIF:16152568
GeneRIF:14618545
GeneRIF:15464270
GeneRIF:14741324
GeneRIF:12808430
SCHIZO NOS-CHR/EXACERB[accessedResource: ICD9:295.94][accessDate: 04-11-2010]
GeneRIF:11807415
GeneRIF:12782962
GeneRIF:15048642
GeneRIF:12605094
GeneRIF:12399954
GeneRIF:15124015
GeneRIF:14966479
GeneRIF:16011574
GeneRIF:15211620
GeneRIF:15221639
GeneRIF:11042361
schizophrenia-1
GeneRIF:15601604
Other specified types of schizophrenia, chronic state with acute exacerbation
GeneRIF:14642436
GeneRIF:12627456
GeneRIF:12814864
GeneRIF:14509080
GeneRIF:14755439
GeneRIF:15292665
GeneRIF:15211629
GeneRIF:16056149
GeneRIF:15151706
GeneRIF:15066891
GeneRIF:12875921
GeneRIF:16037677
GeneRIF:11681838
GeneRIF:15194870
SCHIZOPHRENIA NEC-CHR
GeneRIF:11807409
GeneRIF:15389752
GeneRIF:15363473
Dementia Praecox
GeneRIF:15885920
Schizophrenic disorders[accessedResource: SNOMEDCT:191526005][accessDate: 04-11-2010]
GeneRIF:15668720
GeneRIF:15861039
GeneRIF:12591580
GeneRIF:15508520
GeneRIF:15362017
GeneRIF:15211628
Unspecified schizophrenia, chronic state with acute exacerbation[accessedResource: ICD9:295.94][accessDate: 04-11-2010]
GeneRIF:14729256
GeneRIF:12815733
GeneRIF:15274033
GeneRIF:15254796
GeneRIF:15617864
GeneRIF:15694236
SNOMEDCT:191528006
GeneRIF:12722515
GeneRIF:12950712
GeneRIF:12140776
GeneRIF:15271586
GeneRIF:15318026
GeneRIF:12439825
GeneRIF:12478479
schizophrenia
[X]Schizophrenia, unspecified
Other specified types of schizophrenia, unspecified state[accessedResource: ICD9:295.80][accessDate: 04-11-2010]
GeneRIF:15310849
Schizophrenic Disorder
GeneRIF:15564899
GeneRIF:12682740
SCHIZO NOS-SUBCHR/EXACER
GeneRIF:12218662
GeneRIF:15657645
SCHIZOPHRENIA NEC-REMISS
GeneRIF:11702055
GeneRIF:15271585
GeneRIF:15539862
GeneRIF:15167690
GeneRIF:12610647
GeneRIF:12960750
GeneRIF:14582144
GeneRIF:14755443
GeneRIF:15450681
SCHIZOPHRENIA NEC-UNSPEC
Unspecified schizophrenia, chronic state with acute exacerbation
A major psychotic disorder characterized by abnormalities in the perception or expression of reality. It affects the cognitive and psychomotor functions. Common clinical signs and symptoms include delusions, hallucinations, disorganized thinking, and retreat from reality.[accessedResource: NCIt:C3362][accessDate: 04-11-2010]
Unspecified schizophrenia
GeneRIF:15009827
Other specified types of schizophrenia, in remission[accessedResource: ICD9:295.85][accessDate: 04-11-2010]
Other specified types of schizophrenia[accessedResource: ICD9:295.8][accessDate: 04-11-2010]
GeneRIF:15945063
GeneRIF:12782960
ICD9:295.93
Unspecified schizophrenia (disorder)[accessedResource: SNOMEDCT:191528006][accessDate: 04-11-2010]
GeneRIF:12898568
GeneRIF:15738936
Unspecified schizophrenia, unspecified state
GeneRIF:15900227
GeneRIF:14623376
GeneRIF:11840500
GeneRIF:15564900
GeneRIF:15531077
GeneRIF:15660663
GeneRIF:12497630
GeneRIF:15048641
GeneRIF:14518171
SCHIZOPHRENIA NEC-CHR[accessedResource: ICD9:295.82][accessDate: 04-11-2010]
Schizophrenic disorders (disorder)
ICD9:295.84
GeneRIF:15653259
GeneRIF:15094474
[X]Schizophrenia, unspecified (disorder)[accessedResource: SNOMEDCT:192327003][accessDate: 04-11-2010]
GeneRIF:12815740
SNOMEDCT:191579000
GeneRIF:14639047
GeneRIF:14755438
GeneRIF:15820333
GeneRIF:15940305
GeneRIF:15820226
GeneRIF:12007452
SNOMEDCT:58214004
NIFSTD:birnlex_2104
GeneRIF:14699424
[X]Schizophrenia, unspecified[accessedResource: SNOMEDCT:192327003][accessDate: 04-11-2010]
SCHIZOPHRENIA NEC-SUBCHR[accessedResource: ICD9:295.81][accessDate: 04-11-2010]
Unspecified schizophrenia (disorder)
GeneRIF:16082709
GeneRIF:12873802
GeneRIF:14623368
GeneRIF:12867516
ICD9:295.83
GeneRIF:11803454
GeneRIF:12436019
Other specified types of schizophrenia
Schizophrenia (disorder)[accessedResource: SNOMEDCT:58214004][accessDate: 04-11-2010]
GeneRIF:15452587
GeneRIF:14732590
GeneRIF:15277408
GeneRIF:15652872
GeneRIF:15824744
GeneRIF:15124004
GeneRIF:15726117
James Malone
GeneRIF:15305146
GeneRIF:15211633
GeneRIF:15114630
GeneRIF:16039057
SCHIZO NEC-SUBCHR/EXACER
GeneRIF:12931209
GeneRIF:13129656
TAO:0001114
EV:0100475
The upper or anterior division of the animal body that contains the brain, the chief sense organs, and the mouth.[accessedResource: BTO:0000282][accessDate: 04-11-2010]
The anterior section (tagma) of the insect body bearing the compound eyes, antennae and mouthparts; separated from the thorax by the cervix.[accessedResource: TGMA:0000002][accessDate: 04-11-2010]
Head (volume)[accessedResource: FMAID:7154][accessDate: 04-11-2010]
Cardinal body part, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with the skull, it is partially surrounded by skin of head. Examples: There is only one head.
MAT:0000294
WBbt:0005739
The anterior section (tagma) of the insect body bearing the compound eyes, antennae and mouthparts; separated from the thorax by the cervix.
FBbt:00000004
XAO:0003024
NIFSTD:birnlex_1230
MFO:0001660
Tomasz Adamusiak
BTO:0000282
The upper or anterior division of the animal body that contains the brain, the chief sense organs, and the mouth.
James Malone
TGMA:0000002
FMAID:7154
Head (volume)
Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[accessedResource: TAO:0001114][accessDate: 04-11-2010]
adult head[accessedResource: TGMA:0000002][accessDate: 04-11-2010]
Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.
SAEL:46
head
adult head
Ele Holloway
James Malone
CESS
SW684
James Malone
Ele Holloway
Colloid Adenocarcinoma of the Colon[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
Colonic mucinous adenocarcinoma
Colloid Adenocarcinoma of the Colon
Colon Colloid Adenocarcinoma[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
NCIt:C7966
An invasive adenocarcinoma of the colon characterized by the presence of pools of extracellular mucin. Malignant glandular epithelial cells are present in the mucin collections. Mucin constitutes more than 50% of the lesion.[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
James Malone
Colloidal Adenocarcinoma of Colon[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
Colloidal Colon Adenocarcinoma[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
DOID:3029
Colonic Colloidal Adenocarcinoma[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
Colonic Colloid Adenocarcinoma[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
Colloidal Adenocarcinoma of the Colon
Mucinous Adenocarcinoma of Colon
Colonic Mucinous Adenocarcinoma[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
Colonic Colloid Adenocarcinoma
Colloid Adenocarcinoma of Colon
colon mucinous adenocarcinoma
Colonic Colloidal Adenocarcinoma
Colloidal Adenocarcinoma of the Colon[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
Colloidal Colon Adenocarcinoma
An invasive adenocarcinoma of the colon characterized by the presence of pools of extracellular mucin. Malignant glandular epithelial cells are present in the mucin collections. Mucin constitutes more than 50% of the lesion.
Mucinous Adenocarcinoma of the Colon[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
Mucinous Adenocarcinoma of Colon[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
Colloidal Adenocarcinoma of Colon
Colon Colloid Adenocarcinoma
mucinous adenocarcinoma of the colon
Colloid Adenocarcinoma of Colon[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
Tomasz Adamusiak
NIFSTD:sao1843715402
RNS
A polynucleotide consisting essentially of chains with a repeating backbone of phosphate and ribose units to which nitrogenous bases are attached. RNA is unique among biological macromolecules in that it can encode genetic information, serve as an abundant structural component of cells, and also possesses catalytic activity. (Rieger et al., Glossary of Genetics: Classical and Molecular, 5th ed) (MSH)[accessedResource: NIFSTD:sao1843715402][accessDate: 04-11-2010]
ribose nucleic acid
A polynucleotide consisting essentially of chains with a repeating backbone of phosphate and ribose units to which nitrogenous bases are attached. RNA is unique among biological macromolecules in that it can encode genetic information, serve as an abundant structural component of cells, and also possesses catalytic activity. (Rieger et al., Glossary of Genetics: Classical and Molecular, 5th ed) (MSH)
http://www.ebi.ac.uk/efo/EFO_0001454
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#RNA
yeast nucleic acid
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#RNA[accessedResource: MO_594][accessDate: 04-11-2010]
Jie Zheng
ribonucleic acids
James Malone
Ribonukleinsaeure
RNA
RNA is a chemical compound which are naturally occurring polyribonucleotides.
ribonucleic acid
pentosenucleic acids
High molecular weight, linear polymers, composed of nucleotides containing ribose and linked by phosphodiester bonds; RNA is central to the synthesis of proteins.
MO_594
A population in which a grouping of subjects in some study grouped on the basis of the probable outcome of some disease e.g. by gene expression, by physiological indicators etc
prognostic subgroup
James Malone
SKO007
James Malone
Ele Holloway
Pt45P1
James Malone
Ele Holloway
NCI-H2228
James Malone
Ele Holloway
true
UO:0000006
http://www.ebi.ac.uk/efo/EFO_0001683
A substance unit is a base unit which is a standardised quantity of an element or compound with uniform composition.
A base unit which is a standardized quantity of an element or compound with uniform composition.
substance unit
James Malone
Failure of the heart to pump a sufficient amount of blood to meet the needs of the body tissues, resulting in tissue congestion and edema. Signs and symptoms include shortness of breath, pitting edema, enlarged tender liver, engorged neck veins, and pulmonary rales.
NCIt:C3080
Congestive heart failure (disorder)[accessedResource: DOID:395][accessDate: 04-11-2010]
GeneRIF:12234945
CHF NOS[accessedResource: ICD9:428.0][accessDate: 04-11-2010]
GeneRIF:12133421
Heart failure involving the RIGHT VENTRICLE.
GeneRIF:12948841
A heterogeneous condition in which the heart is unable to pump out sufficient blood to meet the metabolic need of the body. Heart failure can be caused by structural defects, functional abnormalities (VENTRICULAR DYSFUNCTION), or a sudden overload beyond its capacity. Chronic heart failure is more common than acute heart failure which results from sudden insult to cardiac function, such as MYOCARDIAL INFARCTION.[accessedResource: MSH:D006333][accessDate: 04-11-2010]
GeneRIF:15458431
GeneRIF:14685701
Congestive heart failure, unspecified
Congestive heart disease[accessedResource: DOID:395][accessDate: 04-11-2010]
Myocardial Failure[accessedResource: MSH:D006333][accessDate: 04-11-2010]
1. inadequacy of the heart so that as a pump it fails to maintain the circulation of blood, with the result that congestion and edema develop in the tissues; SEE ALSO forward heart failure, backward heart failure, right ventricular failure, left ventricular failure. SYN cardiac failure, cardiac insufficiency, congestive heart failure, myocardial insufficiency. 2. resulting clinical syndromes including shortness of breath, pitting edema, enlarged tender liver, engorged neck veins, and pulmonary rales in various combinations.
GeneRIF:15007012
GeneRIF:12376296
CHF[accessedResource: DOID:395][accessDate: 04-11-2010]
Cardiac Failure[accessedResource: MSH:D006333][accessDate: 04-11-2010]
Decompensation, Heart[accessedResource: MSH:D006333][accessDate: 04-11-2010]
GeneRIF:11972292
CCF - Congestive cardiac failure[accessedResource: SNOMEDCT:42343007][accessDate: 04-11-2010]
GeneRIF:12392981
CCF - Congestive cardiac failure
CHF - Congestive heart failure
A heterogeneous condition in which the heart is unable to pump out sufficient blood to meet the metabolic need of the body. Heart failure can be caused by structural defects, functional abnormalities (VENTRICULAR DYSFUNCTION), or a sudden overload beyond its capacity. Chronic heart failure is more common than acute heart failure which results from sudden insult to cardiac function, such as MYOCARDIAL INFARCTION.
GeneRIF:12133434
Heart failure involving the LEFT VENTRICLE.
GeneRIF:15321927
Left Sided Heart Failure[accessedResource: MSH:D006333][accessDate: 04-11-2010]
Failure of the heart to pump a sufficient amount of blood to meet the needs of the body tissues, resulting in tissue congestion and edema. Signs and symptoms include shortness of breath, pitting edema, enlarged tender liver, engorged neck veins, and pulmonary rales.[accessedResource: NCIt:C3080][accessDate: 04-11-2010]
ICD9:428.0
GeneRIF:12967639
congestive heart failure
Myocardial Failure
MSH:D006333
GeneRIF:15475532
Congetive cardiac failure
GeneRIF:12388270
Heart failure accompanied by EDEMA, such as swelling of the legs and ankles and congestion in the lungs.
Cardiac Failure
Heart failure involving the LEFT VENTRICLE.[accessedResource: MSH:D006333][accessDate: 04-11-2010]
SNOMEDCT:42343007
low output heart failure
Congestive heart failure, unspecified[accessedResource: ICD9:428.0][accessDate: 04-11-2010]
James Malone
CHF NOS
Left Sided Heart Failure
Heart failure accompanied by EDEMA, such as swelling of the legs and ankles and congestion in the lungs.[accessedResource: MSH:D006333][accessDate: 04-11-2010]
GeneRIF:12835956
Heart failure involving the RIGHT VENTRICLE.[accessedResource: MSH:D006333][accessDate: 04-11-2010]
Heart failure caused by dysfunction of the MYOCARDIUM, leading to defective cardiac emptying (contraction) or filling (relaxation).
Heart Decompensation
Heart failure caused by dysfunction of the MYOCARDIUM, leading to defective cardiac emptying (contraction) or filling (relaxation).[accessedResource: MSH:D006333][accessDate: 04-11-2010]
GeneRIF:15704067
Heart Failure
DOID:395
GeneRIF:12468107
Right-Sided Heart Failure
GeneRIF:15861037
GeneRIF:15319210
Heart Failure[accessedResource: MSH:D006333][accessDate: 04-11-2010]
GeneRIF:15601581
CHF - Congestive heart failure[accessedResource: SNOMEDCT:42343007][accessDate: 04-11-2010]
GeneRIF:14729387
GeneRIF:12364464
Congestive heart failure (disorder)
GeneRIF:12610310
GeneRIF:14575298
Heart Failure, Right-Sided[accessedResource: MSH:D006333][accessDate: 04-11-2010]
CHF
Cardiac Failure Congestive
GeneRIF:15802562
GeneRIF:12791592
GeneRIF:12135128
Congestive heart disease
Tomasz Adamusiak
Cardiac Failure Congestive[accessedResource: NCIt:C3080][accessDate: 04-11-2010]
Congetive cardiac failure[accessedResource: DOID:395][accessDate: 04-11-2010]
FBbt:00005515
adult eye primordium early
.
adult eye primordium early[accessedResource: FBbt:00005515][accessDate: 04-11-2010]
.[accessedResource: FBbt:00005515][accessDate: 04-11-2010]
adult eye primordium
James Malone
The state of being infected such as from the introduction of a foreign agent such as serum, vaccine, antigenic substance or organism.
infection
James Malone
ZFA:0001198
pituitary placode
pituitary placode[accessedResource: ZFA:0001198][accessDate: 04-11-2010]
adenohypophyseal placode
James Malone
A property of a cell which is no longer pluripotent
differentiated
http://www.arabidopsis.org/servlets/TairObject?id=1005158803&type=germplasm
CS57779 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158803&type=germplasm
CS57779
James Malone
MO_890
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#array_manufacturer
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#array_manufacturer[accessedResource: MO_890][accessDate: 04-11-2010]
array manufacturer
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158730&type=germplasm
CS57706 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158730&type=germplasm
CS57706
James Malone
the A. thaliana Ecotype Ler
Jie Zheng
obsolete_ecotype
2.4
A biotype resulting from selection in a particular habitat, e.g. the A. thaliana Ecotype Ler
true
James Malone
using strain instead to hang ecotypes off
MO_71
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158794&type=germplasm
CS57770 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158794&type=germplasm
CS57770
James Malone
OE19
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158850&type=germplasm
CS57826 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158850&type=germplasm
CS57826
James Malone
U373
James Malone
BJ
BT549
James Malone
MO_223
a compound or solution for treatment.
A description of the method used to deliver e.g. a compound or solution for treatment.
delivery method
Tomasz Adamusiak
Jie Zheng
FBbt:00005463
crystal cell specific anlage
James Malone
FBbt:00005670
embryonic esophageal ganglion
James Malone
C6H3FN2O4
CHEBI:53049
2,4-DNFB
DNFB
InChIKey=LOTKRQAVGJMPNV-UHFFFAOYAZ
2,4-Dinitrofluorobenzene
1-fluoro-2,4-dinitrobenzene
A fluorobenzene compound with two nitro substituents in the 2- and 4-positions.
1,2,4-Fluorodinitrobenzene
Fluorodinitrobenzene
2,4-Dinitrobenzenefluoride
http://www.ebi.ac.uk/efo/EFO_0002722
[O-][N+](=O)c1ccc(F)c(c1)[N+]([O-])=O
2,4-Dinitro-1-fluorobenzene
Fluoro-2,4-dinitrobenzene
Tomasz Adamusiak
Ele Holloway
FDNB
DFB
InChI=1/C6H3FN2O4/c7-5-2-1-4(8(10)11)3-6(5)9(12)13/h1-3H
Dinitrofluorobenzene
2,4-Dinitrophenyl fluoride
NCI-H2081
James Malone
Ele Holloway
uterine sarcoma
NCI-H1792
James Malone
Ele Holloway
true
MO_23
A process in which the act is intended to modify or alter some other material entity,
treatment
Tomasz Adamusiak
Jie Zheng
MO_934
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#optimization_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#optimization_design[accessedResource: MO_934][accessDate: 04-11-2010]
optimization design
Tomasz Adamusiak
A caudal ganglionic eminence is a transitory brain structure present in the embryonic and fetal stages of brain development and that is located towards the caudal end.
caudal ganglionic eminence
James Malone
NCIt:C4756
Vulva Intraepithelial Neoplasia
Dysplasia of Vulva[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
vulvar intraepithelial neoplasia
Vulvar Dysplasia
Vulva Dysplasia[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Intraepithelial Neoplasia of the Vulva
Vulval Intraepithelial Neoplasia[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Intraepithelial Neoplasia of the Vulva[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Dysplasia of Vulva
Vulvar Dysplasia[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
VIN[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Vulval Dysplasia
Vulva Dysplasia
VIN
Vulva Intraepithelial Neoplasia[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Vulval Intraepithelial Neoplasia
Tomasz Adamusiak
Dysplasia of the Vulva[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Vulval Dysplasia[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Intraepithelial Neoplasia of Vulva[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Dysplasia of the Vulva
Intraepithelial Neoplasia of Vulva
Ele Holloway
pineal body[accessedResource: BTO:0001067][accessDate: 04-11-2010]
pineal body
A small, cone-shaped organ in the brain of most vertebrates that secretes the hormone melatonin.[accessedResource: BTO:0001067][accessDate: 04-11-2010]
MAT:0000448
BTO:0001067
pineal organ
pineal gland
MFO:0079940
FMAID:62033
XAO:0000160
EV:0100131
pineal organ[accessedResource: BTO:0001067][accessDate: 04-11-2010]
A small, cone-shaped organ in the brain of most vertebrates that secretes the hormone melatonin.
Circumventricular organ of neuraxis which is shaped like a pine cone and attached on the midline near the posterior and habenular commissures of the epithalamus.
epiphysis cerebri
James Malone
epiphysis cerebri[accessedResource: BTO:0001067][accessDate: 04-11-2010]
MA:0000175
true
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#genetic_variation
MO_557
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#genetic_variation[accessedResource: MO_557][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
genetic factor
CHEBI:30911
rel-(2R,3R,4R,5S)-hexane-1,2,3,4,5,6-hexol
gulitol
Sorbitol
C6H14O6
http://www.ebi.ac.uk/efo/EFO_0001543
glucitol
JEG3
James Malone
Ele Holloway
WIDR
James Malone
Ele Holloway
Choriocarcinoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:3594][accessDate: 04-11-2010]
An aggressive malignant tumor arising from trophoblastic cells. The vast majority of cases arise in the uterus and represent gestational choriocarcinomas that derive from placental trophoblastic cells. Approximately half of the cases develop from a complete hydatidiform mole. A minority of cases arise in the testis or the ovaries. There is often marked elevation of human chorionic gonadotropin (hCG) in the blood. Choriocarcinomas disseminate rapidly through the hematogenous route; the lungs are most frequently affected.[accessedResource: NCIt:C2948][accessDate: 04-11-2010]
Chorioepithelioma
Choriocarcinoma (disorder)[accessedResource: DOID:3594][accessDate: 04-11-2010]
chorioepithelioma[accessedResource: DOID:3594][accessDate: 04-11-2010]
DOID:3594
An aggressive malignant tumor arising from trophoblastic cells. The vast majority of cases arise in the uterus and represent gestational choriocarcinomas that derive from placental trophoblastic cells. Approximately half of the cases develop from a complete hydatidiform mole. A minority of cases arise in the testis or the ovaries. There is often marked elevation of human chorionic gonadotropin (hCG) in the blood. Choriocarcinomas disseminate rapidly through the hematogenous route; the lungs are most frequently affected.
Chorioepithelioma NOS
NCIt:C2948
choriocarcinoma
Choriocarcinoma, no ICD-O subtype (morphologic abnormality)
Choriocarcinoma (disorder)
Chorioepithelioma NOS[accessedResource: DOID:3594][accessDate: 04-11-2010]
S-2 cell
BTO:0001677
Schneider's Line S2 cell
S2 cell[accessedResource: BTO:0001677][accessDate: 04-11-2010]
SCHNEIDER-2 cell[accessedResource: BTO:0001677][accessDate: 04-11-2010]
SCHNEIDER-2 cell
Schneider's Line S2 cell[accessedResource: BTO:0001677][accessDate: 04-11-2010]
James Malone
S2 cell
SL2
Insect - fruitfly (Drosophila melanogaster) cell line, established from the late embryo of a Drosophila melanogaster (fruitfly) in 1972; originally the cells were diploid with 5-10% XY, currently the cell line has only XX cells that are now 60-80% tetraploid.
Insect - fruitfly (Drosophila melanogaster) cell line, established from the late embryo of a Drosophila melanogaster (fruitfly) in 1972; originally the cells were diploid with 5-10% XY, currently the cell line has only XX cells that are now 60-80% tetraploid.[accessedResource: BTO:0001677][accessDate: 04-11-2010]
SCHNEIDER S2 Cell
SCHNEIDER S2 Cell[accessedResource: BTO:0001677][accessDate: 04-11-2010]
Schneider
S2
S-2 cell[accessedResource: BTO:0001677][accessDate: 04-11-2010]
CL:0000041
Any fully developed granular leukocyte whose nucleus contains multiple lobes joined by filamentous connections, especially a neutrophil.
mature eosinophil leucocyte[accessedResource: CL:0000041][accessDate: 04-11-2010]
mature eosinocyte
mature eosinophil
polymorphonuclear leucocyte[accessedResource: CL:0000041][accessDate: 04-11-2010]
polymorphonuclear leukocyte
PML
A fully differentiated eosinophil, a granular leukocyte with a nucleus that usually has two lobes connected by one or more slender threads of chromatin, and cytoplasm containing coarse, round granules that are uniform in size and which can be stained by the dye eosin.
mature eosinophil[accessedResource: CL:0000041][accessDate: 04-11-2010]
PML[accessedResource: BTO:0001026][accessDate: 04-11-2010]
A fully differentiated eosinophil, a granular leukocyte with a nucleus that usually has two lobes connected by one or more slender threads, and cytoplasm containing coarse, round granules that are uniform in size and which can be stained by the dye eosin. Cells are also differentiated from other granulocytes by a small nuclear-to-cytoplasm ratio (1:3). This cell type is CD49d-positive.[accessedResource: CL:0000041][accessDate: 04-11-2010]
James Malone
BTO:0001026
Any fully developed granular leukocyte whose nucleus contains multiple lobes joined by filamentous connections, especially a neutrophil.[accessedResource: BTO:0001026][accessDate: 04-11-2010]
polymorphonuclear leucocyte
mature eosinophil leukocyte
mature eosinophil leukocyte[accessedResource: CL:0000041][accessDate: 04-11-2010]
mature eosinophil leucocyte
A fully differentiated eosinophil, a granular leukocyte with a nucleus that usually has two lobes connected by one or more slender threads, and cytoplasm containing coarse, round granules that are uniform in size and which can be stained by the dye eosin. Cells are also differentiated from other granulocytes by a small nuclear-to-cytoplasm ratio (1:3). This cell type is CD49d-positive.
mature eosinocyte[accessedResource: CL:0000041][accessDate: 04-11-2010]
The middle part of an alimentary canal.
midgut
FBbt:00005383
The part of the alimentary canal derived from the endoderm.[accessedResource: FBbt:00005383][accessDate: 04-11-2010]
BTO:0000863
The middle part of an alimentary canal.[accessedResource: BTO:0000863][accessDate: 04-11-2010]
The part of the alimentary canal derived from the endoderm.
James Malone
true
PERSON: James Malone
A dervied mass unit is a derived unit which is a measure of the the amount of matter/energy of a physical object, derived from the base unit for mass.
derived mass unit
James Malone
Any of six small voluntary muscles that pass between the eyeball and the orbit and control the movement of the eyeball in relation to the orbit.[accessedResource: BTO:0001579][accessDate: 04-11-2010]
Extrinsic muscle of eyeball
Extrinsic muscle of eyeball[accessedResource: FMA:49033][accessDate: 04-11-2010]
Any of six small voluntary muscles that pass between the eyeball and the orbit and control the movement of the eyeball in relation to the orbit.
FMA:49033
Extra-ocular muscle[accessedResource: FMA:49033][accessDate: 04-11-2010]
extraocular muscle
BTO:0001579
Extra-ocular muscle
birn_anat:birnlex_1706
preoptic area
Tomasz Adamusiak
Jie Zheng
A temperature derived unit which is equal to 5/9ths of a kelvin. Negative 40 degrees Fahrenheit is equal to negative 40 degrees Celsius.
Tomasz Adamusiak
MO_812
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#degrees_F[accessedResource: MO_812][accessDate: 04-11-2010]
F
Jie Zheng
true
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#degrees_F
degree fahrenheit
http://www.ebi.ac.uk/efo/EFO_0001701
James Malone
pancreatic cell
James Malone
(7E,9E,11E,13Z)-retinoic acid
Neovitamin A acid
isotretinoin
Accutane
InChIKey=SHGAZHPCJJPHSC-WWZGNHTLDJ
CC1=C(\\C=C\\C(C)=C\\C=C\\C(C)=C/C(O)=O)C(C)(C)CCC1
13-cis-Vitamin A acid
http://www.ebi.ac.uk/efo/EFO_0002411
isotretinoino
13-RA
A retinoic acid that has formula C20H28O2.
Amnesteem
isotretinoinum
InChI=1/C20H28O2/c1-15(8-6-9-16(2)14-19(21)22)11-12-18-17(3)10-7-13-20(18,4)5/h6,8-9,11-12,14H,7,10,13H2,1-5H3,(H,21,22)/b9-6+,12-11+,15-8+,16-14-/f/h21H
Claravis
CHEBI:6067
13-cis-retinoic acid
Ele Holloway
C20H28O2
(2Z,4E6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraenoic acid
isotretinoine
James Malone
http://www.ebi.ac.uk/efo/EFO_0001676
An androstanoid having 17beta-hydroxy and 3-oxo groups, together with unsaturation at C-4-C-5.
[H][C@@]12CCC3=CC(=O)CC[C@]3(C)[C@@]1([H])CC[C@]1(C)[C@@H](O)CC[C@@]21[H]
4-androsten-17beta-ol-3-one
Testosteron
C19H28O2
testosteronum
Androderm
testosterona
testosterone
InChIKey=MUMGGOZAMZWBJJ-DYKIIFRCBC
(8alpha,10alpha,13alpha,14beta,17alpha)-17-hydroxyandrost-4-en-3-one
17beta-hydroxyandrost-4-en-3-one
17beta-hydroxy-4-androsten-3-one
InChI=1/C19H28O2/c1-18-9-7-13(20)11-12(18)3-4-14-15-5-6-17(21)19(15,2)10-8-16(14)18/h11,14-17,21H,3-10H2,1-2H3/t14-,15-,16-,17-,18-,19-/m0/s1
CHEBI:17347
An androgen that has formula C19H28O2.
carbon(II) oxide
A carbon oxide that has formula CO.
James Malone
carbon monooxide
InChIKey=UGFAIRIUMAVXCW-UHFFFAOYAT
http://www.ebi.ac.uk/efo/EFO_0001500
[CO]
InChI=1/CO/c1-2
CHEBI:17245
carbon monoxide
Publication submitted to a journal for publication.
submitted
Tomasz Adamusiak
SAEL:37
FBbt:00003214
A cell, group of cells, or organ of endothelial origin that selectively removes materials from the blood, concentrates or alters them, and secretes them for further use in the body or for elimination from the body.[accessedResource: BTO:0000522][accessDate: 04-11-2010]
James Malone
BTO:0000522
XAO:0000158
endocrine system[accessedResource: TAO:0001158][accessDate: 04-11-2010]
TAO:0001158
MA:0002563
MA:0002564
adult endocrine system
adult endocrine system[accessedResource: FBbt:00003214][accessDate: 04-11-2010]
SAEL:33
A cell, group of cells, or organ of endothelial origin that selectively removes materials from the blood, concentrates or alters them, and secretes them for further use in the body or for elimination from the body.
gland
endocrine system
TRACT, INFECTION OF URINARY
NCIt:C50791
A bacterial infectious process affecting any part of the urinary tract, most commonly the bladder and the urethra. Symptoms include urinary urgency and frequency, burning sensation during urination, lower abdominal discomfort, and cloudy urine.
TRACT, INFECTION OF URINARY[accessedResource: NCIt:C50791][accessDate: 04-11-2010]
Tomasz Adamusiak
A bacterial infectious process affecting any part of the urinary tract, most commonly the bladder and the urethra. Symptoms include urinary urgency and frequency, burning sensation during urination, lower abdominal discomfort, and cloudy urine.[accessedResource: NCIt:C50791][accessDate: 04-11-2010]
urinary tract infection
http://www.arabidopsis.org/servlets/TairObject?id=1005158716&type=germplasm
CS57692 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158716&type=germplasm
CS57692
James Malone
A172
James Malone
Ele Holloway
adrenergic antagonists
adrenergic blockers
James Malone
http://www.ebi.ac.uk/efo/EFO_0001862
adrenergic blockaders
adrenergic blocker
adrenoceptor antagonists
An agent that binds to but does not activate adrenergic receptors thereby blocking the actions of endogenous or exogenous adrenergic agonists.
CHEBI:37887
adrenergic receptor blockaders
adrenergic antagonist
RKO
James Malone
KELLY
A KELLY is a cell line.
A KELLY is all of the following: something that is bearer of a neuroblastoma, something that derives from a Homo sapiens, and something that derives from a brain.
Natural Language Generator 8th April 2010
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158615&type=germplasm
CS57591 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158615&type=germplasm
CS57591
James Malone
primary cell line
Tomasz Adamusiak
CHEBI:17234
gluco-hexose
Glukose
Glc
C6H12O6
http://www.ebi.ac.uk/efo/EFO_0001545
glucose
http://www.arabidopsis.org/servlets/TairObject?id=1005158764&type=germplasm
CS57740 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158764&type=germplasm
CS57740
James Malone
Follicular carcinoma, well differentiated[accessedResource: SNOMEDCT:28173006][accessDate: 04-11-2010]
[M]Follicular adenocarcinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189642005][accessDate: 04-11-2010]
Thyroid Gland Adenocarcinoma
Follicular Carcinoma of Thyroid Gland
Follicular thyroid carcinoma (disorder)
Adenocarcinomas, Follicular
Follicular Cancer of the Thyroid
James Malone
follicular thyroid carcinoma
Follicular adenocarcinoma, NOS[accessedResource: SNOMEDCT:5257006][accessDate: 04-11-2010]
[M]Follicular carcinoma[accessedResource: SNOMEDCT:189642005][accessDate: 04-11-2010]
Thyroid Adenocarcinoma
Follicular Carcinoma of Thyroid
Follicular Cancer of the Thyroid Gland
SNOMEDCT:28173006
Follicular carcinoma - well differentiated
Follicular Cancer of Thyroid[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
Follicular Carcinoma of Thyroid[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
Thyroid Gland Adenocarcinoma[accessedResource: NCIt:C27380][accessDate: 04-11-2010]
Follicular carcinoma, NOS[accessedResource: SNOMEDCT:5257006][accessDate: 04-11-2010]
MSH:D018263
A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. The nuclear features which characterise the thyroid gland papillary carcinoma are absent. It is linked to radiation and comprises approximately 10% to 15% of thyroid cancers. Clinically, it usually presents as a solitary mass in the thyroid gland. It is generally unifocal and thickly encapsulated and shows invasion of the capsule or the vessels. Diagnostic procedures include: thyroid function tests, thyroid radioisotope scanning, thyroid ultrasound and fine needle biopsy. Treatment options include: partial or complete thyroidectomy. Adjuvant treatment options include: radioiodine therapy, TSH suppression and external radiation.[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
Follicular Cancer of Thyroid
NCIt:C27380
SNOMEDCT:255028004
Follicular thyroid carcinoma (disorder)[accessedResource: DOID:3962][accessDate: 04-11-2010]
Follicular carcinoma, NOS
NCIt:C8054
[M]Follicular adenocarcinoma NOS[accessedResource: SNOMEDCT:189642005][accessDate: 04-11-2010]
An adenocarcinoma of the thyroid gland, in which the cells are arranged in the form of follicles. (From Dorland, 27th ed)[accessedResource: MSH:D018263][accessDate: 04-11-2010]
Follicular carcinoma
Follicular carcinoma of the Thyroid gland
A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. The nuclear features which characterise the thyroid gland papillary carcinoma are absent. It is linked to radiation and comprises approximately 10% to 15% of thyroid cancers. Clinically, it usually presents as a solitary mass in the thyroid gland. It is generally unifocal and thickly encapsulated and shows invasion of the capsule or the vessels. Diagnostic procedures include: thyroid function tests, thyroid radioisotope scanning, thyroid ultrasound and fine needle biopsy. Treatment options include: partial or complete thyroidectomy. Adjuvant treatment options include: radioiodine therapy, TSH suppression and external radiation.
Follicular Cancer of the Thyroid Gland[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
Follicular adenocarcinoma (morphologic abnormality)[accessedResource: DOID:3962][accessDate: 04-11-2010]
Follicular Thyroid Gland Carcinoma[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
GeneRIF:14568171
Follicular Cancer of Thyroid Gland[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
SNOMEDCT:189642005
[M]Follicular carcinoma
Adenocarcinomas, Follicular[accessedResource: MSH:D018263][accessDate: 04-11-2010]
FTC - Follicular thyroid carcinoma
Well-Differentiated Follicular Adenocarcinoma
An adenocarcinoma arising from the follicular cells of the thyroid gland. According to the degree of differentiation, it is classified either as differentiated carcinoma (extensive evidence of follicular cell differentiation), or poorly differentiated carcinoma (limited evidence of follicular cell differentiation). (NCI05)[accessedResource: NCIt:C27380][accessDate: 04-11-2010]
Follicular Carcinoma of Thyroid Gland[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
Follicular adenocarcinoma, well differentiated (morphologic abnormality)
Follicular Thyroid Cancer
Follicular carcinoma of the Thyroid gland[accessedResource: DOID:3962][accessDate: 04-11-2010]
[M]Follicular adenocarcinoma NOS
Follicular adenocarcinoma - well differentiated[accessedResource: SNOMEDCT:28173006][accessDate: 04-11-2010]
Follicular adenocarcinoma, well differentiated (morphologic abnormality)[accessedResource: SNOMEDCT:28173006][accessDate: 04-11-2010]
Follicular carcinoma[accessedResource: DOID:3962][accessDate: 04-11-2010]
DOID:3962
FTC - Follicular thyroid carcinoma[accessedResource: SNOMEDCT:255028004][accessDate: 04-11-2010]
Follicular Carcinoma of the Thyroid[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
Follicular Thyroid Cancer[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
Follicular adenocarcinoma (morphologic abnormality)
Follicular Cancer of the Thyroid[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
Thyroid Adenocarcinoma[accessedResource: NCIt:C27380][accessDate: 04-11-2010]
An adenocarcinoma arising from the follicular cells of the thyroid gland. According to the degree of differentiation, it is classified either as differentiated carcinoma (extensive evidence of follicular cell differentiation), or poorly differentiated carcinoma (limited evidence of follicular cell differentiation). (NCI05)
An adenocarcinoma of the thyroid gland, in which the cells are arranged in the form of follicles. (From Dorland, 27th ed)
Follicular Adenocarcinoma[accessedResource: MSH:D018263][accessDate: 04-11-2010]
[M]Follicular adenocarcinoma NOS (morphologic abnormality)
Follicular Adenocarcinoma
Follicular Cancer of Thyroid Gland
GeneRIF:14666683
SNOMEDCT:5257006
Follicular Carcinoma of the Thyroid
Thyroid Gland Follicular Carcinoma
Follicular adenocarcinoma, NOS
http://www.arabidopsis.org/servlets/TairObject?id=1005158695&type=germplasm
CS57671 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158695&type=germplasm
CS57671
James Malone
MS589
James Malone
Ele Holloway
distal renal arthery
Tomasz Adamusiak
Jie Zheng
malignant lymphoma, Burkitt's type
James Malone
Burkitt Lymphoma[accessedResource: DOID:8584][accessDate: 04-11-2010]
Lymphoma, Burkitt's[accessedResource: MSH:D002051][accessDate: 04-11-2010]
Burkitt's tumor NOS (morphologic abnormality)
GeneRIF:15728515
Tumor, Burkitt[accessedResource: MSH:D002051][accessDate: 04-11-2010]
Burkitts Tumor
Leukemia, Lymphoblastic, Burkitt-Type
GeneRIF:12604406
small Non-Cleaved cell Lymphoma, Burkitt's type[accessedResource: DOID:8584][accessDate: 04-11-2010]
Burkitt's tumors (morphologic abnormality)[accessedResource: DOID:8584][accessDate: 04-11-2010]
Leukemia, Lymphoblastic, Burkitt-Type[accessedResource: MSH:D002051][accessDate: 04-11-2010]
Burkitt's lymphoma - disorder
Burkitt's tumour [obs]
GeneRIF:16169462
Tumor, Burkitt
Burkitts Leukemia
Burkitt Leukemia[accessedResource: MSH:D002051][accessDate: 04-11-2010]
DOID:8584
GeneRIF:15520469
Leukemias, L3 Lymphocytic
A form of undifferentiated malignant LYMPHOMA usually found in central Africa, but also reported in other parts of the world. It is commonly manifested as a large osteolytic lesion in the jaw or as an abdominal mass. B-cell antigens are expressed on the immature cells that make up the tumor in virtually all cases of Burkitt lymphoma. The Epstein-Barr virus (HERPESVIRUS 4, HUMAN) has been isolated from Burkitt lymphoma cases in Africa and it is implicated as the causative agent in these cases; however, most non-African cases are EBV-negative.
GeneRIF:14697225
Burkitt's tumour [obs][accessedResource: DOID:8584][accessDate: 04-11-2010]
ICD9:200.2
GeneRIF:15498855
Lymphoma, Burkitt
GeneRIF:14707079
malignant lymphoma, Burkitt's type[accessedResource: DOID:8584][accessDate: 04-11-2010]
Burkitts Leukemia[accessedResource: MSH:D002051][accessDate: 04-11-2010]
Burkitt's Leukemia[accessedResource: MSH:D002051][accessDate: 04-11-2010]
Burkitt's tumor or lymphoma[accessedResource: DOID:8584][accessDate: 04-11-2010]
GeneRIF:12410315
Burkitt's tumor NOS (morphologic abnormality)[accessedResource: DOID:8584][accessDate: 04-11-2010]
Leukemia, Burkitt Cell[accessedResource: MSH:D002051][accessDate: 04-11-2010]
Burkitts lymphoma
Burkitt's lymphoma NOS (disorder)[accessedResource: DOID:8584][accessDate: 04-11-2010]
GeneRIF:11964311
GeneRIF:12672960
GeneRIF:15940251
L3 Lymphocytic Leukemia[accessedResource: MSH:D002051][accessDate: 04-11-2010]
GeneRIF:11783945
GeneRIF:15061213
Lymphocytic Leukemias, L3[accessedResource: MSH:D002051][accessDate: 04-11-2010]
Burkitt's lymphoma NOS (disorder)
GeneRIF:15384174
small Non-Cleaved cell Lymphoma, Burkitt's type
A form of undifferentiated malignant LYMPHOMA usually found in central Africa, but also reported in other parts of the world. It is commonly manifested as a large osteolytic lesion in the jaw or as an abdominal mass. B-cell antigens are expressed on the immature cells that make up the tumor in virtually all cases of Burkitt lymphoma. The Epstein-Barr virus (HERPESVIRUS 4, HUMAN) has been isolated from Burkitt lymphoma cases in Africa and it is implicated as the causative agent in these cases; however, most non-African cases are EBV-negative.[accessedResource: MSH:D002051][accessDate: 04-11-2010]
GeneRIF:12594826
Burkitt's lymphoma of unspecified site (disorder)[accessedResource: DOID:8584][accessDate: 04-11-2010]
Lymphoma, African
L3 Lymphocytic Leukemia
GeneRIF:12808131
MSH:D002051
Burkitt lymphoma/leukaemia
GeneRIF:11869962
Lymphoma, African[accessedResource: MSH:D002051][accessDate: 04-11-2010]
GeneRIF:11443860
Burkitt Leukemia
Burkitt's Lymphoma
Burkitt's Leukemia
Burkitt's tumor or lymphoma
GeneRIF:14980076
Burkitt's lymphoma of unspecified site (disorder)
Burkitt lymphoma/leukaemia[accessedResource: DOID:8584][accessDate: 04-11-2010]
Burkitt's Tumor[accessedResource: MSH:D002051][accessDate: 04-11-2010]
Burkitt's tumors (morphologic abnormality)
Burkitt Cell Leukemia
GeneRIF:12070030
Burkitt's lymphoma - disorder[accessedResource: DOID:8584][accessDate: 04-11-2010]
CL:0000384
ligament cell
Tomasz Adamusiak
C11H12Cl2N2O5
D-(-)-2,2-dichloro-N-(beta-hydroxy-alpha-(hydroxymethyl)-p-nitrophenylethyl)acetamide
A dichloro-substituted acetamide containing a nitrobenzene ring, an amide bond and two alcohol functions.
Chlorocol
chloramphenicolum
levomicetina
http://www.ebi.ac.uk/efo/EFO_0002403
2,2-dichloro-N-[(1R,2R)-2-hydroxy-1-(hydroxymethyl)-2-(4-nitrophenyl)ethyl]acetamide
James Malone
CHEBI:17698
Sificetina
A dichloro-substituted acetamide containing a nitrobenzene ring, an amide bond and an alcohol function.
Halomycetin
Oleomycetin
InChI=1/C11H12Cl2N2O5/c12-10(13)11(18)14-8(5-16)9(17)6-1-3-7(4-2-6)15(19)20/h1-4,8-10,16-17H,5H2,(H,14,18)/t8-,9-/m1/s1/f/h14H
Chloromycetin
Chlorocid
Globenicol
Ele Holloway
chloramphenicol
OC[C@@H](NC(=O)C(Cl)Cl)[C@H](O)c1ccc(cc1)N(=O)=O
Chloramex
laevomycetinum
Fenicol
InChIKey=WIIZWVCIJKGZOK-TUYINDPHDP
levomycetin
D-(-)-threo-1-p-nitrophenyl-2-dichloroacetylamino-1,3-propanediol
cloramfenicol
MCCAR
James Malone
Ele Holloway
growth hormones
Wachstumshormon
http://www.ebi.ac.uk/efo/EFO_0001548
A hormone that specifically regulates growth.
growth hormone
true
UO:0000033
http://www.ebi.ac.uk/efo/EFO_0001789
A time unit which is equal to 24 hours.
A day is a derived time unit which is equal to 24 hours.
day
James Malone
BTO:0000887
A body tissue consisting of long cells that contract when stimulated and produce motion.
A body tissue consisting of long cells that contract when stimulated and produce motion.[accessedResource: BTO:0000887][accessDate: 04-11-2010]
muscle
James Malone
BCKN-1
James Malone
Ele Holloway
WBbt:0005178
MAT:0000165
hermaphrodite gonad
OntologyMappingImporter following MAT:0000165
James Malone
JAX:000654
CBA/CaJ is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/000654.html
CBA/CaJ
James Malone
C3042
A poorly circumscribed neoplasm arising from the soft tissues. It is characterized by the presence of spindle-shaped fibroblasts and an infiltrative growth pattern.
A poorly circumscribed neoplasm arising from the soft tissues. It is characterized by the presence of spindle-shaped fibroblasts and an infiltrative growth pattern.[accessedResource: C3042][accessDate: 04-11-2010]
fibromatosis
James Malone
A LY2 is a cell line.
A LY2 is all of the following: something that is bearer of a breast carcinoma, something that derives from an
epithelial cell, and something that derives from a mammary gland.
James Malone
Natural Language Generator 8th April 2010
LY2
PMID:9844629
IR(lox/lox) transfection mouse strain maintained on a mixed (C57BL/6 x 129/Sv) genetic background.
IR (lox/lox)
Tomasz Adamusiak
Jie Zheng
true
ArrayExpress Production Team
RNA-sequencing
An assay in which sequencing technology (e.g. Solexa/454) is used to generate RNA sequence, analyse the transcibed regions of the genome, and or to quantitate transcript abundance
obsolete_RNA-seq
http://www.ebi.ac.uk/efo/EFO_0001603
retinoic acid
CHEBI:26536
InChI=1/C20H28O2/c1-15(8-6-9-16(2)14-19(21)22)11-12-18-17(3)10-7-13-20(18,4)5/h6,8-9,11-12,14H,7,10,13H2,1-5H3,(H,21,22)/f/h21H
CC(C=CC1=C(C)CCCC1(C)C)=CC=CC(C)=CC(O)=O
InChIKey=SHGAZHPCJJPHSC-PKSOQXRJCZ
C20H28O2
3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraenoic acid
A retinoid that has formula C20H28O2.
1.8
true
Strain or line specific to virus
obsolete_virus strain
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158643&type=germplasm
CS57619 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158643&type=germplasm
CS57619
James Malone
FBbt:00005482
anal pad specific anlage
James Malone
A Daudi Burkitt's lymphoma cell line is a cell line.
A Daudi Burkitt's lymphoma cell line is bearer of Daudi Burkitt's lymphoma.
obsolete_Daudi Burkitt's lymphoma cell line
duplicate of Daudi http://www.ebi.ac.uk/efo/EFO_0002169
2.6.1
obsolete_Daudi Burkitt's lymphoma cell line
James Malone
true
Natural Language Generator 8th April 2010
A 267b1 ki ras is a cell line.
A 267b1 ki ras derives from a prostate.
267B1
Natural Language Generator 8th April 2010
James Malone
Neck (volume)[accessedResource: FMAID:7155][accessDate: 04-11-2010]
Neck (volume)
BTO:0000420
pedicle
NIFSTD:sao1642908940
adult neck
Spine Neck[accessedResource: NIFSTD:sao1642908940][accessDate: 04-11-2010]
Tomasz Adamusiak
James Malone
pedicle[accessedResource: NIFSTD:sao1642908940][accessDate: 04-11-2010]
Subdivision of body proper, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with the cervical vertebral coumn, it is partially surrounded by skin of neck. Examples: There is only one neck.
SAEL:70
adult neck[accessedResource: TGMA:0000005][accessDate: 04-11-2010]
FMAID:7155
The membranous tube that attaches the thorax to the margins of the occipital foramen.
The membranous tube that attaches the thorax to the margins of the occipital foramen.[accessedResource: TGMA:0000005][accessDate: 04-11-2010]
EV:0100476
Spine Neck
The part of an animal that connects the head with the body.
The part of an animal that connects the head with the body.[accessedResource: BTO:0000420][accessDate: 04-11-2010]
TGMA:0000005
MAT:0000297
neck
GeneRIF:12893022
GeneRIF:15879687
GeneRIF:16088850
CORONARY HEART DIS[accessedResource: MSH:D003327][accessDate: 04-11-2010]
CORONARY DIS
GeneRIF:14747236
Coronary Artery Disease[accessedResource: NCIt:C26732][accessDate: 04-11-2010]
GeneRIF:12588779
GeneRIF:15607533
GeneRIF:12074827
Coronary Disease
An imbalance between myocardial functional requirements and the capacity of the CORONARY VESSELS to supply sufficient blood flow. It is a form of MYOCARDIAL ISCHEMIA (insufficient blood supply to the heart muscle) caused by a decreased capacity of the coronary vessels.
GeneRIF:12151850
GeneRIF:11859854
GeneRIF:14695459
GeneRIF:15598085
GeneRIF:12362314
GeneRIF:12594357
GeneRIF:11889198
DOID:3393
GeneRIF:12151853
GeneRIF:15920035
GeneRIF:12801611
GeneRIF:12588754
CHD
GeneRIF:15199365
CAD[accessedResource: NCIt:C26732][accessDate: 04-11-2010]
GeneRIF:12207101
CHD - Coronary heart disease
Coronary Disease[accessedResource: NCIt:C26732][accessDate: 04-11-2010]
GeneRIF:12879153
An imbalance between myocardial functional requirements and the capacity of the CORONARY VESSELS to supply sufficient blood flow. It is a form of MYOCARDIAL ISCHEMIA (insufficient blood supply to the heart muscle) caused by a decreased capacity of the coronary vessels.[accessedResource: MSH:D003327][accessDate: 04-11-2010]
GeneRIF:15692099
GeneRIF:15585218
GeneRIF:15585208
GeneRIF:15887860
GeneRIF:15784171
MSH:D003327
coronary heart disease
GeneRIF:12925562
GeneRIF:12117730
CHD (coronary heart disease)[accessedResource: DOID:3393][accessDate: 04-11-2010]
GeneRIF:12818402
Coronary Artery Disease
NCIt:C26732
GeneRIF:15837082
GeneRIF:12666851
GeneRIF:15877284
GeneRIF:16159602
Coronary Heart Diseases[accessedResource: MSH:D003327][accessDate: 04-11-2010]
James Malone
Coronary Heart Diseases
CORONARY HEART DIS
GeneRIF:15585206
GeneRIF:14576201
Coronary heart disease is a cardiovascular disease in which there is a failure of coronary circulation to supply adequate circulation to cardiac muscle and surrounding tissue.
Coronary Diseases
GeneRIF:12030385
GeneRIF:11947914
GeneRIF:15825968
GeneRIF:14592833
CAD
GeneRIF:15379752
Narrowing of the coronary arteries due to fatty deposits inside the arterial walls.[accessedResource: NCIt:C26732][accessDate: 04-11-2010]
GeneRIF:12104085
GeneRIF:11972304
GeneRIF:11916624
GeneRIF:15193812
GeneRIF:16113535
GeneRIF:15454272
GeneRIF:12408999
CORONARY DIS[accessedResource: MSH:D003327][accessDate: 04-11-2010]
GeneRIF:12842840
GeneRIF:12676816
GeneRIF:11919305
Narrowing of the coronary arteries due to fatty deposits inside the arterial walls.
GeneRIF:15653107
Coronary Diseases[accessedResource: MSH:D003327][accessDate: 04-11-2010]
GeneRIF:11862316
GeneRIF:14967821
GeneRIF:15920055
MO_541
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#waterbath
http://www.ebi.ac.uk/efo/EFO_0002089
A water bath is a temperature control bath in which a water acts as contact medium enabling temperature transfer from the heating element or cooling element to the sample. The temperature can be controlled in the 0 to 100 degree centigrade range (under normal pressure).
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#waterbath[accessedResource: MO_541][accessDate: 04-11-2010]
water bath
James Malone
James Malone
Tomasz Adamusiak
true
Jie Zheng
1.6
Acute Lymphocytic Leukemia
Duplicate with 'disease factor' EFO_0000408.
obsolete_disease state
The name of the pathology diagnosed in the organism from which the biomaterial was derived. The disease state is normal if no disease has been diagnosed. E.g Acute Lymphocytic Leukemia
MO_787
carbonyl dichloride
InChIKey=YGYAWVDWMABLBF-UHFFFAOYAH
InChI=1/CCl2O/c2-1(3)4
ClC(Cl)=O
COCl2
CCl2O
phosgene
http://www.arabidopsis.org/servlets/TairObject?id=1005158897&type=germplasm
CS57873 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158897&type=germplasm
CS57873
James Malone
Quality? Is this intrinsic to the organism?
MO_43
The number of cell passages if the organism or organism part that is cultured is unicellular or a cell culture; otherwise the number of generations.
generation
Tomasz Adamusiak
Jie Zheng
James Malone
SNU449
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0001811
MO_740
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#uM[accessedResource: MO_740][accessDate: 04-11-2010]
uM
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#uM
micromolar
true
µM
Tomasz Adamusiak
Jie Zheng
A unit of molarity which is equal to one millionth of a molar or 10^[-6] M.
RD
James Malone
Ele Holloway
HEC-1A
HEC1A
James Malone
Ele Holloway
ovarian serous adenocarcinoma
Tomasz Adamusiak
One of a pair of cells flanking the stomatal pore and causing the opening and closing of the pore by changes in turgor.
guard cell
One of a pair of cells flanking the stomatal pore and causing the opening and closing of the pore by changes in turgor.[accessedResource: CL:0000292][accessDate: 04-11-2010]
stomatal guard cell
CL:0000292
stomatal guard cell[accessedResource: CL:0000292][accessDate: 04-11-2010]
A cell that composes the bulk of the islets of Langerhans and secretes insulin.
beta cell
CL:0000168
Insulin Cell
Insulin Cell[accessedResource: NCIt:C32199][accessDate: 04-11-2010]
beta cell islets
insulin secreting cell[accessedResource: CL:0000168][accessDate: 04-11-2010]
James Malone
NCIt:C32199
Insulin Secreting Cell
A cell that composes the bulk of the islets of Langerhans and secretes insulin.[accessedResource: NCIt:C32199][accessDate: 04-11-2010]
Tomasz Adamusiak
(2R)-N-[4-cyano-3-(trifluoromethyl)phenyl]-3-[(4-fluorophenyl)sulfonyl]-2-hydroxy-2-methylpropanamide
InChI=1/C18H14F4N2O4S/c1-17(26,10-29(27,28)14-6-3-12(19)4-7-14)16(25)24-13-5-2-11(9-23)15(8-13)18(20,21)22/h2-8,26H,10H2,1H3,(H,24,25)/t17-/m0/s1/f/h24H
InChIKey=LKJPYSCBVHEWIU-ARSKLOKFDL
James Malone
CHEBI:3090
Casodex
bicalutamide
http://www.ebi.ac.uk/efo/EFO_0002006
C18H14F4N2O4S
C[C@](O)(CS(=O)(=O)c1ccc(F)cc1)C(=O)Nc2ccc(C#N)c(c2)C(F)(F)F
An amide that has formula C18H14F4N2O4S.
bicalutamida
bicalutamidum
C[C@](O)(CS(=O)(=O)c1ccc(F)cc1)C(=O)Nc1ccc(C#N)c(c1)C(F)(F)F
PC3 cell
James Malone
MCC:0000380
Human prostate carcinoma cell line; established from the bone marrow metastasis isolated post-mortem from a 62-year-old Caucasian man with grade IV prostate cancer (poorly differentiated adenocarcinoma) after androgen suppression therapy; described to form tumors in nude mice, to grow in soft agar, and to be unresponsive to androgen treatment.
Human prostate carcinoma cell line; established from the bone marrow metastasis isolated post-mortem from a 62-year-old Caucasian man with grade IV prostate cancer (poorly differentiated adenocarcinoma) after androgen suppression therapy; described to form tumors in nude mice, to grow in soft agar, and to be unresponsive to androgen treatment.[accessedResource: BTO:0001061][accessDate: 04-11-2010]
PC-3 cell
PC3 cell[accessedResource: BTO:0001061][accessDate: 04-11-2010]
Ele Holloway
BTO:0001061
PC-3
PC3
PC-3 cell[accessedResource: BTO:0001061][accessDate: 04-11-2010]
adrenergic uptake inhibitors
http://www.ebi.ac.uk/efo/EFO_0001850
CHEBI:35640
Adrenergic uptake inhibitors are drugs that block the transport of adrenergic transmitters into axon terminals or into storage vesicles within terminals. The tricyclic antidepressants and amphetamines are among the therapeutically important drugs that may act via inhibition of adrenergic transport. Many of these drugs also block transport of serotonin.
adrenergic uptake inhibitor
James Malone
Tretinoine (French) (EINECS)
all-trans-Vitamin A1 acid
Renova
Retin-A
A retinoic acid that has formula C20H28O2.
InChIKey=SHGAZHPCJJPHSC-FWNNKZREDV
all-trans-Vitamin A acid
all-trans-Tretinoin
Tretin M
(2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraenoic acid
Stieva-A
Ro 1-5488
http://www.ebi.ac.uk/efo/EFO_0001481
CHEBI:15367
AGN 100335
Retinoic acid
Vesanoid
CC(\\C=C\\C1=C(C)CCCC1(C)C)=C/C=C/C(C)=C/C(O)=O
(all-E)-3,7-Dimethyl-9-(2,6,6-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid
Acide retinoique (French) (DSL)
all-trans-retinoic acid
3,7-Dimethyl-9-(2,6,6-trimethyl-1-cyclohexene-1-yl)-2,4,6,8-nonatetraenoic acid (ECL)
all-trans-beta-Retinoic acid
InChI=1/C20H28O2/c1-15(8-6-9-16(2)14-19(21)22)11-12-18-17(3)10-7-13-20(18,4)5/h6,8-9,11-12,14H,7,10,13H2,1-5H3,(H,21,22)/b9-6+,12-11+,15-8+,16-14+/f/h21H
trans-Retinoic acid
tretinoin
C20H28O2
beta-Retinoic acid
all-(E)-Retinoic acid
Vitamin A acid
Retisol-A
BTO:0001572
BTO:0001572
A thin layer of cartilage, usually hyaline, on the articular surface of bones in synovial joints.
A thin layer of cartilage, usually hyaline, on the articular surface of bones in synovial joints.[accessedResource: BTO:0001572][accessDate: 04-11-2010]
articular cartilage
James Malone
MAT:0000367
BTO:0000159
A resting stage of a plant (as the lily, onion, hyacinth, or tulip) that is usually formed underground and consists of a short stem base bearing one or more buds enclosed in overlapping membranous or fleshy leaves.
A resting stage of a plant (as the lily, onion, hyacinth, or tulip) that is usually formed underground and consists of a short stem base bearing one or more buds enclosed in overlapping membranous or fleshy leaves.[accessedResource: BTO:0000159][accessDate: 04-11-2010]
bulb
James Malone
http://www.ebi.ac.uk/efo/EFO_0001688
UO:0000011
true
An electric current unit which is equal to the constant current which, if maintained in two straight parallel conductors of infinite length, of negligible circular cross-section, and placed 1 m apart in vacuum, would produce between these conductors a force equal to 2 x 10^[-7] newton per meter of length.
An ampere is an electric current unit which is equal to the constant current which, if maintained in two straight parallel conductors of infinite length, of negligible circular cross-section, and placed 1 m apart in vacuum, would produce between these conductors a force equal to 2 x 10^[-7] newton per meter of length.
A
James Malone
ampere
agrochemicals
agrichemicals
James Malone
agrichemical
agricultural chemicals
agrochemical
http://www.ebi.ac.uk/efo/EFO_0001832
An agrochemical is a substance that is used in agriculture or horticulture.
CHEBI:33286
The main middle section of the insect body comprising three thoracic rings: the pro-, the meso- and the metathoraces which are more or less well fused and cask-like sometimes having on the upper lateral part one of two pairs of wings, while on the ventrolateral part each thoracic ring bears a pair of legs.[accessedResource: FBbt:00000015][accessDate: 04-11-2010]
acicula[accessedResource: TGMA:000136][accessDate: 04-11-2010]
Chest[accessedResource: FMAID:9576][accessDate: 04-11-2010]
MAT:0000295
1: The part of the mammalian body between the neck and the abdomen; also: its cavity in which the heart and lungs lie.n2: The middle of the three chief divisions of the body of an insect; also: the corresponding part of a crustacean or an arachnid.
BTO:0001368
Chest
thorax
EV:0100010
FMAID:9576
James Malone
TGMA:000136
Any blade with a few short branches arising apically or subapically.
FBbt:00000015
The main middle section of the insect body comprising three thoracic rings: the pro-, the meso- and the metathoraces which are more or less well fused and cask-like sometimes having on the upper lateral part one of two pairs of wings, while on the ventrolateral part each thoracic ring bears a pair of legs.
A small, slender, rigid, needle- or thornlike spicule.[accessedResource: TGMA:000136][accessDate: 04-11-2010]
A small, slender, rigid, needle- or thornlike spicule.
acicula
1: The part of the mammalian body between the neck and the abdomen; also: its cavity in which the heart and lungs lie.n2: The middle of the three chief divisions of the body of an insect; also: the corresponding part of a crustacean or an arachnid.[accessedResource: BTO:0001368][accessDate: 04-11-2010]
Subdivision of trunk proper, which is demarcated from the neck by the plane of the superior thoracic aperture and from the abdomen internally by the inferior surface of the diaphragm and externally by the costal margin and associated with the thoracic vertebral column and ribcage and from the back of the thorax by the external surface of the posterolateral part of the rib cage, the anterior surface of the thoracic vertebral column and the posterior axillary lines; together with the abdomen and the perineum, it constitutes the trunk proper. Examples: There is only one thorax.
SAEL:106
A Giant Cell Tumor (GCT) cell line derived from a human fibrous histiocytoma lung metastasis
GCT
James Malone
Ele Holloway
https://www.cbil.upenn.edu/RADQuerier/php/displayStudy.php?study_id=449
Athero-susceptible regions of aorta.
disturbed flow regions
Tomasz Adamusiak
Jie Zheng
Lu130
James Malone
RGD:1582190
Dahl salt-sensitive
James Malone
MCF12A
James Malone
FMA:77536
inferior parietal lobule
James Malone
http://www.ebi.ac.uk/efo/EFO_0001841
CHEBI:35481
A drug that has principally analgesic, antipyretic and anti-inflammatory actions. Non-narcotic analgesics do not bind to opioid receptors.
non-narcotic analgesic
James Malone
esophageal carcinoma
obsolete_rat strain
NIFSTD:birnlex_203
2.0.1
consolodation of strain with taxon. rat strain subclasses moved to subclasses of rattus
Tomasz Adamusiak
true
Strain or line specific to rat.
James Malone
An organization role is a role which is borne by an organization.
organization role
James Malone
MO_769
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#investigator
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#investigator[accessedResource: MO_769][accessDate: 04-11-2010]
investigator
Tomasz Adamusiak
Any of the rounded masses of lymphoid tissue that are surrounded by a capsule of connective tissue, are distributed along the lymphatic vessels, and contain numerous lymphocytes which filter the flow of lymph.
lymph gland[accessedResource: BTO:0000784][accessDate: 04-11-2010]
James Malone
MA:00000139
EV:0100050
lymph node
Any of the rounded masses of lymphoid tissue that are surrounded by a capsule of connective tissue, are distributed along the lymphatic vessels, and contain numerous lymphocytes which filter the flow of lymph.[accessedResource: BTO:0000784][accessDate: 04-11-2010]
BTO:0000784
lymph gland
FMAID:5034
MAT:0000442
female accessory gland
parovarium[accessedResource: FBbt:00004914][accessDate: 04-11-2010]
Small, bilaterally paired gland that lies behind the spermathecae and is connected to the uterus by a duct. The gland wall consists of a single layer of polygonal cells, each with a large vacuole and a minute acidophillic granule towards the gland lumen.[accessedResource: FBbt:00004914][accessDate: 04-11-2010]
FBbt:00004914
parovarium
colleterial gland[accessedResource: FBbt:00004914][accessDate: 04-11-2010]
ACgl[accessedResource: FBbt:00004914][accessDate: 04-11-2010]
colleterial gland
ACgl
Develops from male repressed primordium.
Small, bilaterally paired gland that lies behind the spermathecae and is connected to the uterus by a duct. The gland wall consists of a single layer of polygonal cells, each with a large vacuole and a minute acidophillic granule towards the gland lumen.
androgeno
androgen
James Malone
androgenos
androgenes
Androgene
http://www.ebi.ac.uk/efo/EFO_0001484
androgens
A steroid hormone that stimulates or controls the development and maintenance of masculine characteristics in vertebrates by binding to androgen receptors.
CHEBI:50113
interferon gamma
Tomasz Adamusiak
RGD:1582184
Dahl salt-resistant
James Malone
James Malone
dermatologic drugs
dermatologic drug
dermatological agent
http://www.ebi.ac.uk/efo/EFO_0001884
CHEBI:50177
dermatologic agent
A drug used to treat or prevent skin disorders or for the routine care of skin.
InChI=1/C21H24F3N3S/c1-25-11-13-26(14-12-25)9-4-10-27-17-5-2-3-6-19(17)28-20-8-7-16(15-18(20)27)21(22,23)24/h2-3,5-8,15H,4,9-14H2,1H3
http://www.ebi.ac.uk/efo/EFO_0001631
10-[3-(4-methylpiperazin-1-yl)propyl]-2-(trifluoromethyl)-10H-phenothiazine
10-[3-(4-methyl-1-piperazinyl)propyl]-2-(trifluoromethyl)-10H-phenothiazine
trifluoroperazine
CHEBI:45951
C21H24F3N3S
trifluperazine
10-[3-(4-METHYL-PIPERAZIN-1-YL)-PROPYL]-2-TRIFLUOROMETHYL-10H-PHENOTHIAZINE
trifluoperazinum
CN1CCN(CCCN2c3ccccc3Sc3ccc(cc23)C(F)(F)F)CC1
trifluoperazina
InChIKey=ZEWQUBUPAILYHI-UHFFFAOYAS
James Malone
A phenothiazine that has formula C21H24F3N3S.
trifluoperazine
trifluoromethyl-10-(3'-(1-methyl-4-piperazinyl)propyl)phenothiazine
A phenothiazine derivative having a trifluoromethyl subsitituent at the 2-position and a 3-(4-methylpiperazin-1-yl)propyl group at the N-10 position.
acute megakaryoblastic leukaemia
pyomyositis[accessedResource: DOID:876][accessDate: 04-11-2010]
Tropical pyomyositis (disorder)[accessedResource: DOID:876][accessDate: 04-11-2010]
DOID:876
Tropical pyomyositis [dup] (disorder)[accessedResource: DOID:876][accessDate: 04-11-2010]
Tropical pyomyositis[accessedResource: DOID:876][accessDate: 04-11-2010]
pyomyositis
Tomasz Adamusiak
Tropical pyomyositis
Tropical pyomyositis (disorder)
Tropical pyomyositis [dup] (disorder)
ZFS:0000023
segmentation 1-4 somites
James Malone
allergen
http://www.ebi.ac.uk/efo/EFO_0002398
allergenic agent
A role played by a chemical compound in the onset of allergic reaction and interacting with molecular pathways involved in allergy.
alergeno
Ele Holloway
allergene
James Malone
CHEBI:50904
DOID:14691
pseudohypertrophic progressive duchenne and becker types muscular dystrophy
Benign pseudohypertrophic muscular dystrophy
pseudohypertrophic progressive duchenne and becker types muscular dystrophy[accessedResource: DOID:14691][accessDate: 04-11-2010]
Becker's muscular dystrophy
Tomasz Adamusiak
James Malone
GeneRIF:15581626
Tumors of the Ewing's Family
Ewing's Family of Tumours
Ewing Sarcoma/Peripheral Primitive Neuroectodermal Tumor[accessedResource: NCIt:C27291][accessDate: 04-11-2010]
NCIt:C4817
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms.
Ewing's sarcoma/peripheral primitive neuroectodermal tumor
Sarcoma, Ewing's
A malignant tumor of the bone which always arises in the medullary tissue, occurring more often in cylindrical bones. There are conspicuous foci of necrosis in association with irregular masses of small, regular, rounded or ovoid cells with very scanty cytoplasm. The tumor occurs usually before the age of 20, about twice as frequently in males as in females. (From Dorland, 27th ed; Stedman, 25th ed)[accessedResource: MSH:D012512][accessDate: 04-11-2010]
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms.[accessedResource: NCIt:C27291][accessDate: 04-11-2010]
DOID:3369
Ewing's Family of Tumours[accessedResource: NCIt:C27291][accessDate: 04-11-2010]
GeneRIF:12172985
Ewing sarcoma
ES[accessedResource: NCIt:C4817][accessDate: 04-11-2010]
Ewing Tumor
Ewing Family of Tumors
GeneRIF:11956622
Ewing's Sarcoma/Peripheral Primitive Neuroectodermal Tumor[accessedResource: NCIt:C27291][accessDate: 04-11-2010]
Tumors of Ewing's Family[accessedResource: NCIt:C27291][accessDate: 04-11-2010]
Ewing Family of Tumors[accessedResource: NCIt:C27291][accessDate: 04-11-2010]
GeneRIF:15282325
GeneRIF:11992404
A malignant tumor of the bone which always arises in the medullary tissue, occurring more often in cylindrical bones. There are conspicuous foci of necrosis in association with irregular masses of small, regular, rounded or ovoid cells with very scanty cytoplasm. The tumor occurs usually before the age of 20, about twice as frequently in males as in females. (From Dorland, 27th ed; Stedman, 25th ed)
ES
GeneRIF:11313995
MSH:D012512
GeneRIF:15919668
Ewing's Tumor[accessedResource: NCIt:C4817][accessDate: 04-11-2010]
GeneRIF:12527902
GeneRIF:15273724
NCIt:C27291
GeneRIF:14528100
Ewing's tumour[accessedResource: SNOMEDCT:76909002][accessDate: 04-11-2010]
A small round cell tumor that lacks morphologic, immunohistochemical, and electron microscopic evidence of neuroectodermal differentiation. It represents one of the two ends of the spectrum called Ewing's sarcoma/peripheral neuroectodermal tumor. It affects mostly males under age 20, and it can occur in soft tissue or bone. Pain and the presence of a mass are the most common clinical symptoms.[accessedResource: NCIt:C4817][accessDate: 04-11-2010]
Tumors of the Ewing's Family[accessedResource: NCIt:C27291][accessDate: 04-11-2010]
James Malone
Ewing Tumor[accessedResource: MSH:D012512][accessDate: 04-11-2010]
Ewing's sarcoma (morphologic abnormality)[accessedResource: DOID:3369][accessDate: 04-11-2010]
GeneRIF:12447693
GeneRIF:12054564
Ewing Sarcoma/Peripheral Primitive Neuroectodermal Tumor
Ewing's sarcoma[accessedResource: SNOMEDCT:76909002][accessDate: 04-11-2010]
GeneRIF:12557222
GeneRIF:15044653
Tomasz Adamusiak
A small round cell tumor that lacks morphologic, immunohistochemical, and electron microscopic evidence of neuroectodermal differentiation. It represents one of the two ends of the spectrum called Ewing's sarcoma/peripheral neuroectodermal tumor. It affects mostly males under age 20, and it can occur in soft tissue or bone. Pain and the presence of a mass are the most common clinical symptoms.
GeneRIF:15328192
Ewing's sarcoma (morphologic abnormality)
GeneRIF:15748890
GeneRIF:15310753
GeneRIF:15077162
Ewing's tumor
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms. -- 2004
GeneRIF:14977835
Ewing's tumour
Ewing's Family of Tumors
GeneRIF:12700668
SNOMEDCT:76909002
James Malone
ZR7530
ZFA:0000706
The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates.
colon
XAO:0000243
EV:0100079
SAEL:22
EMAPA:18939
The part of the large intestine that extends from the cecum to the rectum.[accessedResource: BTO:0000269][accessDate: 04-11-2010]
FMAID:14543
The part of the large intestine measured from the cecum to the rectum consisting of ascending, transverse, descending and sigmoid portions. The purpose of the colon is to remove water from digested food prior to excretion.
posterior intestine[accessedResource: ZFA:0000706][accessDate: 04-11-2010]
BTO:0000269
The part of the large intestine that extends from the cecum to the rectum.
The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates.[accessedResource: ZFA:0000706][accessDate: 04-11-2010]
James Malone
posterior intestine
MA:0000335
MAP:0000001
http://www.arabidopsis.org/servlets/TairObject?id=1005158807&type=germplasm
CS57783 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158807&type=germplasm
CS57783
James Malone
CROAP-2
CROAP2
James Malone
Ele Holloway
MO_485
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#dose_response_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#dose_response_design[accessedResource: MO_485][accessDate: 04-11-2010]
dose response design
Tomasz Adamusiak
colon ascendens
EV:0100450
Organ part which is continuous with the cecum proximally and the transverse colon distally.
FMAID:14545
ascending colon
James Malone
The portion of the colon between the cecum and the right colic flexure.
The portion of the colon between the cecum and the right colic flexure.[accessedResource: BTO:0000270][accessDate: 04-11-2010]
BTO:0000270
colon ascendens[accessedResource: BTO:0000270][accessDate: 04-11-2010]
MAT:0000311
CCCCC\\C=C/C\\C=C/C\\C=C/C\\C=C/CCCC(=O)C(F)(F)F
Arachidonyltrifluoromethane
C21H31F3O
An organofluorine compound that has formula C21H31F3O.
Arachidonic acid trifluoromethyl ketone
http://www.ebi.ac.uk/efo/EFO_0001476
Arachidonyl trifluoromethyl ketone
James Malone
CHEBI:2341
AACOCF3
(6Z,9Z,12Z,15Z)-1,1,1-trifluorohenicosa-6,9,12,15-tetraen-2-one
InChI=1/C21H31F3O/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20(25)21(22,23)24/h6-7,9-10,12-13,15-16H,2-5,8,11,14,17-19H2,1H3/b7-6-,10-9-,13-12-,16-15-
InChIKey=PLWROONZUDKYKG-DOFZRALJBM
lung endoderm
Tomasz Adamusiak
Jie Zheng
NIFSTD:birnlex_12633
James Malone
A moderately malignant neoplasm composed of primitive neuroectodermal cells dispersed in myxomatous or fibrous stroma intermixed with mature ganglion cells. It may undergo transformation into a neuroblastoma. It arises from the sympathetic trunk or less frequently from the adrenal medulla, cerebral cortex, and other locations. Cervical ganglioneuroblastomas may be associated with HORNER SYNDROME and the tumor may occasionally secrete vasoactive intestinal peptide, resulting in chronic diarrhea (MeSH).[accessedResource: NIFSTD:birnlex_12633][accessDate: 04-11-2010]
Ganglioneuroblastoma (morphologic abnormality)
A neuroblastic tumor characterized by the presence of neuroblastic cells, ganglion cells, and a stroma with Schwannian differentiation constituting more than fifty-percent of the tumor volume. There are two histologic subtypes identified: ganglioneuroblastoma, intermixed and ganglioneuroblastoma, nodular.
NCIt:C3790
A moderately malignant neoplasm composed of primitive neuroectodermal cells dispersed in myxomatous or fibrous stroma intermixed with mature ganglion cells. It may undergo transformation into a neuroblastoma. It arises from the sympathetic trunk or less frequently from the adrenal medulla, cerebral cortex, and other locations. Cervical ganglioneuroblastomas may be associated with HORNER SYNDROME and the tumor may occasionally secrete vasoactive intestinal peptide, resulting in chronic diarrhea (MeSH).
GeneRIF:12185600
A neuroblastic tumor characterized by the presence of neuroblastic cells, ganglion cells, and a stroma with Schwannian differentiation constituting more than fifty-percent of the tumor volume. There are two histologic subtypes identified: ganglioneuroblastoma, intermixed and ganglioneuroblastoma, and nodular.
ganglioneuroblastoma
Ganglioneuroblastomas[accessedResource: MSH:D018305][accessDate: 04-11-2010]
A moderately malignant neoplasm composed of primitive neuroectodermal cells dispersed in myxomatous or fibrous stroma intermixed with mature ganglion cells. It may undergo transformation into a neuroblastoma. It arises from the sympathetic trunk or less frequently from the adrenal medulla, cerebral cortex, and other locations. Cervical ganglioneuroblastomas may be associated with HORNER SYNDROME and the tumor may occasionally secrete vasoactive intestinal peptide, resulting in chronic diarrhea.
A neuroblastic tumor characterized by the presence of neuroblastic cells, ganglion cells, and a stroma with Schwannian differentiation constituting more than fifty-percent of the tumor volume. There are two histologic subtypes identified: ganglioneuroblastoma, intermixed and ganglioneuroblastoma, nodular.[accessedResource: NCIt:C3790][accessDate: 04-11-2010]
A moderately malignant neoplasm composed of primitive neuroectodermal cells dispersed in myxomatous or fibrous stroma intermixed with mature ganglion cells. It may undergo transformation into a neuroblastoma. It arises from the sympathetic trunk or less frequently from the adrenal medulla, cerebral cortex, and other locations. Cervical ganglioneuroblastomas may be associated with HORNER SYNDROME and the tumor may occasionally secrete vasoactive intestinal peptide, resulting in chronic diarrhea.[accessedResource: MSH:D018305][accessDate: 04-11-2010]
MSH:D018305
SNOMEDCT:69515008
Ganglioneuroblastomas
DOID:4163
Tomasz Adamusiak
Ganglioneuroblastoma (morphologic abnormality)[accessedResource: SNOMEDCT:69515008][accessDate: 04-11-2010]
true
ppm
10^[-6]
A dimensionless concentration notation which denotes the amount of a given substance in a total amount of 1,000,000 regardless of the units of measure used as long as they are the same or 1 part in 10^[6].
parts per million
whole organism
NCI-N87
James Malone
Ele Holloway
Plotnikova, J. M., Rahme, L. G., Ausubel, F. M. (2000). Pathogenesis of the Human Opportunistic Pathogen Pseudomonas aeruginosa PA14 in Arabidopsis. Plant Physiol. 124: 1766-1774
A Pseudomonas aeruginosa PA14 infection is a Pseudomonas infection of strain PA14.
Pseudomonas aeruginosa PA14 infection
James Malone
Jie Zheng
Denotes a person having origins in any of the original peoples of the Far East, Southeast Asia, or the Indian subcontinent, including Cambodia, China, India, Japan, Korea, Malaysia, Mongolia, Pakistan, the Philippine Islands, Thailand, and Vietnam.
Asian
NCIt:C41260
Denotes a person having origins in any of the original peoples of the Far East, Southeast Asia, or the Indian subcontinent, including Cambodia, China, India, Japan, Korea, Malaysia, Mongolia, Pakistan, the Philippine Islands, Thailand, and Vietnam.[accessedResource: NCIt:C41260][accessDate: 04-11-2010]
Asians[accessedResource: NCIt:C41260][accessDate: 04-11-2010]
Asians
Tomasz Adamusiak
Myeloid mononuclear recirculating leukocyte that can act as a precursor of tissue macrophages, osteoclasts and some populations of tissue dendritic cells.
monocyte
A mononuclear phagocytic leukocyte, 13 to 25 mm in diameter, with an ovoid or kidney-shaped nucleus, containing lacy, linear chromatin and abundant gray-blue cytoplasm filled with fine reddish and azurophilic granules. Formed in the bone marrow from promonocytes, monocytes are transported to tissues such as the lung and liver, where they develop into macrophages.
Myeloid mononuclear recirculating leukocyte that can act as a precursor of tissue macrophages, osteoclasts and some populations of tissue dendritic cells.[accessedResource: CL:0000576][accessDate: 04-11-2010]
CL:0000576
nongranular leukocyte
mononuclear leukocyte[accessedResource: BTO:0000876][accessDate: 04-11-2010]
nongranular leukocyte[accessedResource: BTO:0000876][accessDate: 04-11-2010]
BTO:0000876
James Malone
A mononuclear phagocytic leukocyte, 13 to 25 mm in diameter, with an ovoid or kidney-shaped nucleus, containing lacy, linear chromatin and abundant gray-blue cytoplasm filled with fine reddish and azurophilic granules. Formed in the bone marrow from promonocytes, monocytes are transported to tissues such as the lung and liver, where they develop into macrophages.[accessedResource: BTO:0000876][accessDate: 04-11-2010]
mononuclear leukocyte
CELIAC DIS[accessedResource: MSH:D002446][accessDate: 04-11-2010]
GeneRIF:12559633
GeneRIF:11869041
ICD9:579.0
Coeliac sprue[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
GeneRIF:15617864
Celiac Sprue
GeneRIF:11908704
GeneRIF:14991945
Idiopathic steatorrhea[accessedResource: DOID:10608][accessDate: 04-11-2010]
CS - Celiac sprue
Gluten-responsive sprue[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
Enteropathies, Gluten-Sensitive
Coeliac syndrome
Wheat-sensitive enteropathy
Coeliac disease
Gluten-Sensitive Enteropathies[accessedResource: MSH:D002446][accessDate: 04-11-2010]
NCIt:C26714
SNOMEDCT:396331005
GSE - Gluten-sensitive enteropathy[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
Celiac rickets (disorder)[accessedResource: SNOMEDCT:275404008][accessDate: 04-11-2010]
GeneRIF:12959221
Celiac disease (disorder)
Gluten-Sensitive Enteropathy
GeneRIF:15657618
GeneRIF:15826953
GeneRIF:12439623
CD - Coeliac disease[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
Nontropical Sprue
Gluten-Induced Enteropathy[accessedResource: NCIt:C26714][accessDate: 04-11-2010]
James Malone
GeneRIF:12743709
Sprue
celiac sprue[accessedResource: DOID:10608][accessDate: 04-11-2010]
Celiac syndrome
Coeliac disease [Ambiguous][accessedResource: DOID:10608][accessDate: 04-11-2010]
Celiac disease NOS[accessedResource: SNOMEDCT:197481005][accessDate: 04-11-2010]
GeneRIF:16026592
GeneRIF:12759242
Coeliac disease NOS
GeneRIF:15215891
Non Tropical Sprue[accessedResource: NCIt:C26714][accessDate: 04-11-2010]
CD - Celiac disease
Celiac disease (disorder)[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
CELIAC DIS
GeneRIF:15174785
celiac disease
Non-tropical sprue
CS - Coeliac sprue[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
Celiac disease NOS (disorder)[accessedResource: DOID:10608][accessDate: 04-11-2010]
GeneRIF:12074713
Celiac rickets (disorder)
Coeliac rickets[accessedResource: SNOMEDCT:275404008][accessDate: 04-11-2010]
GeneRIF:11972887
GeneRIF:12410804
GeneRIF:16285941
GeneRIF:15645196
DOID:10608
GeneRIF:15324937
Coeliac rickets
SNOMEDCT:275404008
GeneRIF:12755416
MSH:D002446
GeneRIF:11826026
Gluten-sensitive enteropathy[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
GeneRIF:12093810
GeneRIF:12788988
Gluten-Induced Enteropathy
A malabsorption syndrome that is precipitated by the ingestion of GLUTEN-containing foods, such as wheat, rye, and barley. It is characterized by INFLAMMATION of the SMALL INTESTINE, loss of MICROVILLI structure, failed INTESTINAL ABSORPTION, and MALNUTRITION.[accessedResource: MSH:D002446][accessDate: 04-11-2010]
GeneRIF:14675396
GSE - Gluten-sensitive enteropathy
GeneRIF:16112033
Coeliac disease NOS[accessedResource: SNOMEDCT:197481005][accessDate: 04-11-2010]
Gluten-induced enteropathy syndrome
GeneRIF:12675238
Celiac syndrome[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
Idiopathic steatorrhoea[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
CS - Celiac sprue[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
GeneRIF:12732349
Idiopathic steatorrhea
GeneRIF:12039527
Gluten enteropathy
Celiac disease NOS
Steatorrhoea - idiopathic
Celiac disease NOS (disorder)
Coeliac syndrome[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
Gluten-induced enteropathy syndrome[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
Celiac rickets
Enteropathies, Gluten[accessedResource: MSH:D002446][accessDate: 04-11-2010]
Coeliac disease [Ambiguous]
Sprue[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
Coeliac disease[accessedResource: DOID:10608][accessDate: 04-11-2010]
Coeliac sprue
GeneRIF:15746535
Gluten-responsive sprue
GeneRIF:12542746
Gluten Enteropathies
Wheat-sensitive enteropathy[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
CS - Coeliac sprue
Enteropathy, Gluten[accessedResource: MSH:D002446][accessDate: 04-11-2010]
Celiac rickets[accessedResource: SNOMEDCT:275404008][accessDate: 04-11-2010]
GeneRIF:12421937
GeneRIF:15120190
CD - Coeliac disease
GeneRIF:12698366
SNOMEDCT:197481005
Nontropical sprue[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
CD - Celiac disease[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
A malabsorption syndrome that is precipitated by the ingestion of GLUTEN-containing foods, such as wheat, rye, and barley. It is characterized by INFLAMMATION of the SMALL INTESTINE, loss of MICROVILLI structure, failed INTESTINAL ABSORPTION, and MALNUTRITION.
SW1573
James Malone
Ele Holloway
sarcomatoid transitional cell carcinoma of the kidney pelvis
Urothelial Cell Carcinoma of the Renal Pelvis
Renal Pelvis Transitional Cell Carcinoma[accessedResource: NCIt:C7355][accessDate: 04-11-2010]
Renal Pelvis Transitional Cell Carcinoma
Transitional Cell Carcinoma of Renal Pelvis
Transitional cell carcinoma of kidney (disorder)[accessedResource: SNOMEDCT:408642003][accessDate: 04-11-2010]
Transitional cell carcinoma of kidney (disorder)
sarcomatoid transitional cell carcinoma of renal Pelvis[accessedResource: DOID:6844][accessDate: 04-11-2010]
Renal Pelvis Urothelial Carcinoma[accessedResource: NCIt:C7355][accessDate: 04-11-2010]
Tomasz Adamusiak
Urothelial Cell Carcinoma of Renal Pelvis[accessedResource: NCIt:C7355][accessDate: 04-11-2010]
sarcomatoid transitional cell carcinoma of the kidney pelvis[accessedResource: DOID:6844][accessDate: 04-11-2010]
Transitional Cell Carcinoma of the Renal Pelvis[accessedResource: NCIt:C7355][accessDate: 04-11-2010]
Urothelial Cell Carcinoma of the Renal Pelvis[accessedResource: NCIt:C7355][accessDate: 04-11-2010]
Transitional Cell Carcinoma of Renal Pelvis[accessedResource: NCIt:C7355][accessDate: 04-11-2010]
Urothelial Cell Carcinoma of Renal Pelvis
NCIt:C7355
DOID:6844
SNOMEDCT:408642003
Transitional Cell Carcinoma of the Renal Pelvis
sarcomatoid transitional cell carcinoma of renal Pelvis
transitional cell carcinoma of kidney
Renal Pelvis Urothelial Carcinoma
http://jaxmice.jax.org/strain/009323.html
ILSXISS112/TejJ
Tomasz Adamusiak
The development of the mushroom body proceeds as follows: Axonogenesis of embryonic Kenyon cells starts late in embryonic stage 14. The axons from these cells extend towards the lateral proto-cerebral tract (LTP). During stage 16, a second set of kenyon cell fibres form a second tract, closely apposed to the first. By late stage 16, both tracts extend anteriorly beyond the LTP to form the distal part of the peduncle. These tracts make a sharp medial turn close to the boundary with the deutocerebrum to form the medial lobe. By late stage 17 the dorsal lobe has emerged as a collateral outgrowth from the point where these tracts bend. Finally, the calyx forms near to the end of embryogenesis.
FBbt:00005508
embryonic central brain mushroom body
Embryonic structure from which the mushroom body is derived. The development of the mushroom body proceeds as follows: Axonogenesis of embryonic Kenyon cells starts late in embryonic stage 14. The axons from these cells extend towards the lateral protocerebral tract (LTP). During stage 16, a second set of Kenyon cell fibers form a second tract, closely apposed to the first. By late stage 16, both tracts extend anteriorly beyond the LTP to form the distal part of the peduncle. These tracts make a sharp medial turn close to the boundary with the deutocerebrum to form the medial lobe. By late stage 17 the dorsal lobe has emerged as a collateral outgrowth from the point where these tracts bend. Finally, the calyx forms near to the end of embryogenesis.
mushroom body primordium[accessedResource: FBbt:00005508][accessDate: 04-11-2010]
Embryonic structure from which the mushroom body is derived. The development of the mushroom body proceeds as follows: Axonogenesis of embryonic Kenyon cells starts late in embryonic stage 14. The axons from these cells extend towards the lateral protocerebral tract (LTP). During stage 16, a second set of Kenyon cell fibers form a second tract, closely apposed to the first. By late stage 16, both tracts extend anteriorly beyond the LTP to form the distal part of the peduncle. These tracts make a sharp medial turn close to the boundary with the deutocerebrum to form the medial lobe. By late stage 17 the dorsal lobe has emerged as a collateral outgrowth from the point where these tracts bend. Finally, the calyx forms near to the end of embryogenesis.[accessedResource: FBbt:00005508][accessDate: 04-11-2010]
James Malone
mushroom body primordium
Tylenol
p-acetamidophenol
p-hydroxyacetanilide
Acetaminophen
paracetamol
N-acetyl-p-aminophenol
p-Acetylaminophenol
InChI=1/C8H9NO2/c1-6(10)9-7-2-4-8(11)5-3-7/h2-5,11H,1H3,(H,9,10)/f/h9H
acetaminophene
paracetamolum
N-(4-hydroxyphenyl)acetamide
http://www.ebi.ac.uk/efo/EFO_0001589
C8H9NO2
4'-hydroxyacetanilide
InChIKey=RZVAJINKPMORJF-BGGKNDAXCW
An acetamide that has formula C8H9NO2.
p-acetaminophenol
4-(Acetylamino)phenol
CHEBI:46195
A derivative of phenol which has an acetamido substituent located para to the phenolic -OH group.
James Malone
Acenol
4-acetamidophenol
CC(=O)Nc1ccc(O)cc1
acetaminofen
APAP
p-hydroxyphenolacetamide
A204
James Malone
Ele Holloway
DOID:10222
Polymyositis (disorder)
Polymyositis (disorder)[accessedResource: DOID:10222][accessDate: 04-11-2010]
polymyositis
Tomasz Adamusiak
1.5
true
obsolete_B-precursor acute lymphoblastic leukemia
James Malone
Duplicate with B-cell acute lymphoblastic leukemia (EFO_0000094) use this instead
MO_892
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#development_or_differentiation_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#development_or_differentiation_design[accessedResource: MO_892][accessDate: 04-11-2010]
development or differentiation design
Tomasz Adamusiak
FBbt:00005159
taste system
gustatory system[accessedResource: TAO:0001101][accessDate: 04-11-2010]
Any sense organ (FBbt:00005155) that has function 'detection of chemical stimulus involved in sensory perception of taste (GO:0050912)'.
MAT:0000275
gustatory sensory organ
Any sense organ (FBbt:00005155) that functions in (some) detection of chemical stimulus involved in sensory perception of taste (GO:0050912).
ZFA:0001101
James Malone
gustatory system
FMAID:7194
gustatory sensory organ[accessedResource: MAT:0000275][accessDate: 04-11-2010]
Gustatory organ system[accessedResource: FMAID:7194][accessDate: 04-11-2010]
Gustatory organ system
TAO:0001101
Any sense organ (FBbt:00005155) that functions in (some) detection of chemical stimulus involved in sensory perception of taste (GO:0050912).[accessedResource: FBbt:00005159][accessDate: 04-11-2010]
FBbt:00005568
embryonic antennal sense organ
James Malone
leaf vascular tissue
James Malone
WM793
James Malone
Ele Holloway
GeneRIF:12839562
Scleroderma[accessedResource: SNOMEDCT:89155008][accessDate: 04-11-2010]
GeneRIF:15833746
GeneRIF:15855645
GeneRIF:12858451
GeneRIF:12618866
GeneRIF:16109415
GeneRIF:16098034
GeneRIF:12847692
MSH:D012595
SNOMEDCT:89155008
Scleroderma syndrome
GeneRIF:12757775
SS - Systemic sclerosis
GeneRIF:15797863
GeneRIF:15654958
GeneRIF:15247510
Scleroderma
GeneRIF:12888869
GeneRIF:12777465
Scleroderma (& [systemic sclerosis])
Systemic sclerosis (disorder)
GeneRIF:14764526
Systemic sclerosis (disorder)[accessedResource: SNOMEDCT:89155008][accessDate: 04-11-2010]
GeneRIF:14662895
systemic scleroderma
GeneRIF:15471851
GeneRIF:16025105
GeneRIF:15500643
GeneRIF:15722417
GeneRIF:12609057
GeneRIF:12528118
GeneRIF:12692352
GeneRIF:15468358
GeneRIF:15068249
GeneRIF:12493731
GeneRIF:15345711
GeneRIF:16081813
GeneRIF:14872500
GeneRIF:15110723
GeneRIF:16112028
ICD9:710.1
GeneRIF:16081426
GeneRIF:14729510
GeneRIF:11904440
systemic sclerosis[accessedResource: DOID:418][accessDate: 04-11-2010]
Systemic sclerosis
GeneRIF:12233882
PSS (progressive systemic sclerosis)
GeneRIF:12847691
James Malone
GeneRIF:12508774
GeneRIF:15641797
GeneRIF:14730633
GeneRIF:15593213
GeneRIF:14722617
PSS (progressive systemic sclerosis)[accessedResource: DOID:418][accessDate: 04-11-2010]
GeneRIF:15215176
Scleroderma syndrome[accessedResource: SNOMEDCT:89155008][accessDate: 04-11-2010]
GeneRIF:14730619
GeneRIF:12843267
GeneRIF:15149850
GeneRIF:12015245
GeneRIF:11796184
GeneRIF:15818662
GeneRIF:14705224
GeneRIF:16049784
GeneRIF:12388554
GeneRIF:12925209
GeneRIF:12374741
DOID:418
GeneRIF:15622541
Scleroderma (& [systemic sclerosis])[accessedResource: DOID:418][accessDate: 04-11-2010]
GeneRIF:12009077
A chronic multi-system disorder of CONNECTIVE TISSUE. It is characterized by SCLEROSIS in the SKIN, the LUNGS, the HEART, the GASTROINTESTINAL TRACT, the KIDNEYS, and the MUSCULOSKELETAL SYSTEM. Other important features include diseased small BLOOD VESSELS and AUTOANTIBODIES. The disorder is named for its most prominent feature (hard skin), and classified into subsets by the extent of skin thickening: LIMITED SCLERODERMA and DIFFUSE SCLERODERMA.
GeneRIF:12007723
SS - Systemic sclerosis[accessedResource: SNOMEDCT:89155008][accessDate: 04-11-2010]
progressive systemic sclerosis[accessedResource: DOID:418][accessDate: 04-11-2010]
GeneRIF:15896720
Thibierge-Weissenbach syndrome
GeneRIF:15146426
A chronic multi-system disorder of CONNECTIVE TISSUE. It is characterized by SCLEROSIS in the SKIN, the LUNGS, the HEART, the GASTROINTESTINAL TRACT, the KIDNEYS, and the MUSCULOSKELETAL SYSTEM. Other important features include diseased small BLOOD VESSELS and AUTOANTIBODIES. The disorder is named for its most prominent feature (hard skin), and classified into subsets by the extent of skin thickening: LIMITED SCLERODERMA and DIFFUSE SCLERODERMA.[accessedResource: MSH:D012595][accessDate: 04-11-2010]
GeneRIF:12629514
Thibierge-Weissenbach syndrome[accessedResource: SNOMEDCT:89155008][accessDate: 04-11-2010]
GeneRIF:12784398
GeneRIF:14613297
GeneRIF:12091308
GeneRIF:12913118
GeneRIF:12528119
GeneRIF:14705223
Progressive systemic sclerosis
GeneRIF:14613485
GeneRIF:15146427
http://www.arabidopsis.org/servlets/TairObject?id=1005158741&type=germplasm
CS57717 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158741&type=germplasm
CS57717
James Malone
HES2
Tomasz Adamusiak
HES-2
PMID:10748519
Astrogliomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Duplicate with astrocytic tumor (EFO_0000272)
Astrocytoma, Cerebral[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12829373
GeneRIF:14729615
Astrocytoma, Anaplastic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytic tumour of brain
Astrocytoma, Intracranial
Intracranial Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytomas, Cerebral
Astrocytoma of brain[accessedResource: SNOMEDCT:254938000][accessDate: 10-05-2010]
GeneRIF:12023424
Astroglioma
Fibrillary Astrocytoma
Oligoastrocytomas, Mixed
Astrocytomas, Intracranial
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation. (From Devita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2013-7; Holland et al., Cancer Medicine, 3d ed, p1082)[accessedResource: MSH:D001254][accessDate: 10-05-2010]
true
astrocytoma of brain (disorder)
Astrocytoma, low grade[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
GeneRIF:15494521
Astrocytomas, Gemistocytic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Diffuse astrocytoma[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Astrocytomas, Protoplasmic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Pilocytic Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:14654927
Astrocytoma, no ICD-O subtype[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Astrocytoma, Grade I
Subependymal Giant Cell Astrocytoma
Astrocytic tumour of brain[accessedResource: SNOMEDCT:254938000][accessDate: 10-05-2010]
Astrocytoma, Protoplasmic
astrocytoma of brain (disorder)[accessedResource: DOID:3069][accessDate: 10-05-2010]
astroglioma[accessedResource: DOID:3069][accessDate: 10-05-2010]
Pilocytic Astrocytomas
Glioma, Astrocytic
Pilocytic Astrocytoma, Juvenile
astrocytoma[accessedResource: DOID:3069][accessDate: 10-05-2010]
Childhood Cerebral Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12740910
Intracranial Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytomas, Grade I
Juvenile Pilocytic Astrocytomas
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation. (From Devita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2013-7; Holland et al., Cancer Medicine, 3d ed, p1082)
Astrocytomas, Grade II[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:15652402
GeneRIF:14603438
Astrocytic Neoplasm
Astrocytoma, Juvenile Pilocytic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma, Gemistocytic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Pilocytic Astrocytomas, Juvenile[accessedResource: MSH:D001254][accessDate: 10-05-2010]
A glial tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, subependymal giant cell astrocytoma, and glioblastoma.[accessedResource: NCIt:C6958][accessDate: 10-05-2010]
Oligoastrocytomas, Mixed[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma of brain
Astrocytomas, Childhood Cerebral[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma, Grade II
Astrocytoma, NOS[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Gemistocytic Astrocytomas
Astrocytoma, no ICD-O subtype (morphologic abnormality)
GeneRIF:11922706
Oligoastrocytoma, Mixed[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytic glioma[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Cerebral Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma, NOS
Mixed Oligoastrocytoma
Cerebral Astrocytomas, Childhood
GeneRIF:12237771
Cystic astrocytoma[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
[M]Astrocytoma NOS
Astrocytic tumor of brain[accessedResource: SNOMEDCT:254938000][accessDate: 10-05-2010]
Grade III Astrocytomas
GeneRIF:15643521
DOID:3069
astrocytoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:3069][accessDate: 10-05-2010]
Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Fibrillary Astrocytomas
Cerebral Astrocytoma
A glial tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, subependymal giant cell astrocytoma, and glioblastoma.
GeneRIF:12850541
GeneRIF:15973775
SNOMEDCT:38713004
MSH:D001254
[M]Astrocytoma NOS[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
GeneRIF:12203396
SNOMEDCT:254938000
GeneRIF:12916719
Protoplasmic Astrocytomas
Astrocytomas, Anaplastic
Astrogliomas
GeneRIF:12819022
Astrocytic tumor of brain
GeneRIF:12385586
Astrocytoma, no ICD-O subtype
Grade II Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytomas, Grade II
Astrocytomas, Pilocytic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
James Malone
Astrocytic Neoplasm[accessedResource: NCIt:C6958][accessDate: 10-05-2010]
Diffuse astrocytoma
GeneRIF:12747804
Grade III Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12168116
GeneRIF:12133571
Astrocytomas, Fibrillary[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:11836615
NCIt:C6958
Subependymal Giant Cell Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Anaplastic Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12077339
Astrocytic Gliomas
Grade III Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12185598
GeneRIF:11958417
Diffuse astrocytoma, low grade
Astrocytoma, low grade
GeneRIF:12519873
Astrocytoma, Fibrillary[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Cystic astrocytoma
Astrocytoma, Gemistocytic
Astrocytic tumor
Protoplasmic Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Anaplastic Astrocytoma
Astrocytoma, Pilocytic
obsolete_astrocytic tumor
Astrocytomas
GeneRIF:12435805
Astrocytoma, Grade III
GeneRIF:11783119
GeneRIF:15799819
GeneRIF:16103883
GeneRIF:12111824
GeneRIF:15289301
Childhood Cerebral Astrocytoma
1.5
Astrocytomas, Grade I[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma
Grade I Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:15902504
GeneRIF:15178645
Astrocytic Gliomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytic Tumor[accessedResource: NCIt:C6958][accessDate: 10-05-2010]
Diffuse astrocytoma, low grade[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
GeneRIF:12393263
Coronary Disease[accessedResource: NCIt:C26732][accessDate: 04-11-2010]
coronary artery disease
NCIt:C26732
CAD
Narrowing of the coronary arteries due to fatty deposits inside the arterial walls.
Tomasz Adamusiak
CAD[accessedResource: NCIt:C26732][accessDate: 04-11-2010]
Coronary Disease
Narrowing of the coronary arteries due to fatty deposits inside the arterial walls.[accessedResource: NCIt:C26732][accessDate: 04-11-2010]
idiopathic pulmonary fibrosis
IPF[accessedResource: NCIt:C35716][accessDate: 04-11-2010]
Chronic and progressive fibrosis of the lung parenchyma of unknown cause.
cryptogenic fibrosing alveolitis
Chronic and progressive fibrosis of the lung parenchyma of unknown cause.[accessedResource: NCIt:C35716][accessDate: 04-11-2010]
NCIt:C35716
IPF
James Malone
AS
DOID:1712
Aortic valve stenosis is a aortic valve disease caused by the incomplete opening of the aortic valve. The aortic valve controls the direction of blood flow from the left ventricle to the aorta. When in good working order, the aortic valve does not impede the flow of blood between these two spaces. Under some circumstances, the aortic valve becomes narrower than normal, impeding the flow of blood. This is known as aortic valve stenosis, or aortic stenosis, often abbreviated AS.[accessedResource: DOID:1712][accessDate: 04-11-2010]
Aortic valve stenosis, NOS[accessedResource: SNOMEDCT:60573004][accessDate: 04-11-2010]
GeneRIF:15311863
Stenosed aortic valve[accessedResource: SNOMEDCT:60573004][accessDate: 04-11-2010]
Aortic valve stenosis, NOS
James Malone
aortic stenosis
Valve Stenosis, Aortic[accessedResource: MSH:D001024][accessDate: 04-11-2010]
A pathological constriction that can occur above (supravalvular stenosis), below (subvalvular stenosis), or at the AORTIC VALVE. It is characterized by restricted outflow from the LEFT VENTRICLE into the AORTA.[accessedResource: MSH:D001024][accessDate: 04-11-2010]
Stenosed aortic valve
Aortic valve stenosis is a aortic valve disease caused by the incomplete opening of the aortic valve. The aortic valve controls the direction of blood flow from the left ventricle to the aorta. When in good working order, the aortic valve does not impede the flow of blood between these two spaces. Under some circumstances, the aortic valve becomes narrower than normal, impeding the flow of blood. This is known as aortic valve stenosis, or aortic stenosis, often abbreviated as AS.
Stenoses, Aortic[accessedResource: MSH:D001024][accessDate: 04-11-2010]
SNOMEDCT:60573004
A pathological constriction that can occur above (supravalvular stenosis), below (subvalvular stenosis), or at the AORTIC VALVE. It is characterized by restricted outflow from the LEFT VENTRICLE into the AORTA.
Aortic valve stenosis (disorder)[accessedResource: DOID:1712][accessDate: 04-11-2010]
AS[accessedResource: DOID:1712][accessDate: 04-11-2010]
AS - Aortic stenosis[accessedResource: SNOMEDCT:60573004][accessDate: 04-11-2010]
Valve Stenoses, Aortic
GeneRIF:11903341
Valve Stenoses, Aortic[accessedResource: MSH:D001024][accessDate: 04-11-2010]
Aortic valve stenosis (disorder)
Aortic valve stenosis is a aortic valve disease caused by the incomplete opening of the aortic valve. The aortic valve controls the direction of blood flow from the left ventricle to the aorta. When in good working order, the aortic valve does not impede the flow of blood between these two spaces. Under some circumstances, the aortic valve becomes narrower than normal, impeding the flow of blood. This is known as aortic valve stenosis, or aortic stenosis, often abbreviated AS.
GeneRIF:14734048
AS - Aortic stenosis
Stenoses, Aortic
MSH:D001024
Valve Stenosis, Aortic
HRE
Human Renal Epithelial cell line
cranium
chondocranium
chondrocranium[accessedResource: TAO:0001424][accessDate: 10-05-2010]
MAT:0000149
Anatomical cluster that is part of the cranium and composed of cartilage and cartilage replacement bones.[accessedResource: TAO:0001424][accessDate: 10-05-2010]
James Malone
ZFA:0000737
skull bone
Skeletal system that is part of the head, including the splanchnocranium, chondrocranium, and dermatocranium.[accessedResource: ZFA:0000737][accessDate: 10-05-2010]
obsolete_craniofacial skeleton bone
Anatomical cluster that is part of the cranium and composed of cartilage and cartilage replacement bones.
TAO:0001424
true
neurocranium[accessedResource: TAO:0001424][accessDate: 10-05-2010]
Synonym with cranium, use cranium instead.
AAO:0000109
craniofacial skeleton bone[accessedResource: MAT:0000149][accessDate: 10-05-2010]
FMAID:87596
Subdivision of skeletal system which consists of the skeleton of the head and its joints.
skeletal system of head
chondrocranium
FMAID:46565
EMAPA:17680
Skeletal system that is part of the head, including the splanchnocranium, chondrocranium, and dermatocranium.
1.8
skull bone[accessedResource: MAT:0000149][accessDate: 10-05-2010]
Subdivision of skeletal system which consists of the skeleton of the head and its joints.[accessedResource: FMAID:46565][accessDate: 10-05-2010]
chondocranium[accessedResource: TAO:0001424][accessDate: 10-05-2010]
cranial skeleton[accessedResource: MAT:0000149][accessDate: 10-05-2010]
cranium[accessedResource: ZFA:0000737][accessDate: 10-05-2010]
neurocranium
cranial skeleton
EHDAA:6029
MA:0000316
skeletal system of head[accessedResource: MAT:0000149][accessDate: 10-05-2010]
craniofacial skeleton bone
James Malone
HPV
NCIt:C27851
Human Papilloma Virus Infection
human papilloma virus
Human Papilloma Virus Infection[accessedResource: NCIt:C27851][accessDate: 04-11-2010]
H209
James Malone
GeneRIF:12297838
GeneRIF:12148114
Liver disorder in pregnancy unspecified (disorder)[accessedResource: DOID:409][accessDate: 04-11-2010]
GeneRIF:12557137
[X]Diseases of the liver
disease of the liver (disorder)
GeneRIF:16339124
GeneRIF:15842357
Liver Dysfunction
GeneRIF:15661915
GeneRIF:11929053
GeneRIF:15286165
Liver disorder in pregnancy, with delivery[accessedResource: DOID:409][accessDate: 04-11-2010]
Liver disorder in pregnancy
Hepatopathy[accessedResource: SNOMEDCT:235856003][accessDate: 04-11-2010]
Liver Dysfunction[accessedResource: MSH:D008107][accessDate: 04-11-2010]
Liver disorder NOS
GeneRIF:12006706
Liver disorder in pregnancy, unspecified as to episode of care[accessedResource: DOID:409][accessDate: 04-11-2010]
Dysfunctions, Liver[accessedResource: MSH:D008107][accessDate: 04-11-2010]
liver disorder[accessedResource: DOID:409][accessDate: 04-11-2010]
disease of the liver (disorder)[accessedResource: DOID:409][accessDate: 04-11-2010]
GeneRIF:12085365
[X]Diseases of the liver (disorder)
Liver disorder in pregnancy - delivered (disorder)[accessedResource: DOID:409][accessDate: 04-11-2010]
Liver disorder in pregnancy (disorder)
GeneRIF:15112358
GeneRIF:12000722
GeneRIF:15719405
GeneRIF:12794718
Unspecified disorder of liver
NCIt:C3196
GeneRIF:12143056
LIVER DIS[accessedResource: MSH:D008107][accessDate: 04-11-2010]
Liver Disorder
ICD9:573.9
GeneRIF:12823590
liver disorder in pregnancy - delivered
SNOMEDCT:197375001
GeneRIF:12149233
Any disease or dysfunction of the liver and the intrahepatic bile ducts.
Disorder of liver[accessedResource: SNOMEDCT:235856003][accessDate: 04-11-2010]
Pathological processes of the LIVER.[accessedResource: MSH:D008107][accessDate: 04-11-2010]
SNOMEDCT:235856003
DOID:409
GeneRIF:12823592
Liver disorder in pregnancy NOS (disorder)
liver disorder in pregnancy - delivered[accessedResource: DOID:409][accessDate: 04-11-2010]
LIVER DIS
GeneRIF:12724528
Diseases, Liver[accessedResource: MSH:D008107][accessDate: 04-11-2010]
GeneRIF:12532447
Unspecified disorder of liver[accessedResource: DOID:409][accessDate: 04-11-2010]
GeneRIF:15969449
SNOMEDCT:197551000
liver disorder antepartum[accessedResource: DOID:409][accessDate: 04-11-2010]
GeneRIF:11898128
Liver disorder NOS[accessedResource: DOID:409][accessDate: 04-11-2010]
liver disorder antepartum
Dysfunctions, Liver
liver disease
Liver disorder in pregnancy, with delivery
Disorder of liver
Pathological processes of the LIVER.
disease of liver [Ambiguous]
disorder of liver (disorder)
Liver disorder in pregnancy NOS (disorder)[accessedResource: DOID:409][accessDate: 04-11-2010]
James Malone
GeneRIF:12029628
Liver disorder in pregnancy unspecified (disorder)
GeneRIF:15246202
GeneRIF:12705907
GeneRIF:14624764
hepatic disorder
MSH:D008107
Disease of liver[accessedResource: SNOMEDCT:235856003][accessDate: 04-11-2010]
Disease of liver
[X]Diseases of the liver[accessedResource: SNOMEDCT:197551000][accessDate: 04-11-2010]
Hepatopathy
GeneRIF:11929052
GeneRIF:15235035
Any disease or dysfunction of the liver and the intrahepatic bile ducts.[accessedResource: NCIt:C3196][accessDate: 04-11-2010]
LD - Liver disease
Liver disorder in pregnancy[accessedResource: DOID:409][accessDate: 04-11-2010]
GeneRIF:12830005
GeneRIF:15377291
[X]Diseases of the liver (disorder)[accessedResource: SNOMEDCT:197551000][accessDate: 04-11-2010]
Liver disorder NOS (disorder)
hepatic disorder[accessedResource: DOID:409][accessDate: 04-11-2010]
Liver disorder in pregnancy, unspecified as to episode of care
Liver disorder in pregnancy - delivered (disorder)
Liver disorder in pregnancy (disorder)[accessedResource: DOID:409][accessDate: 04-11-2010]
GeneRIF:12445411
disease of liver [Ambiguous][accessedResource: DOID:409][accessDate: 04-11-2010]
Disorder of liver (disorder)[accessedResource: SNOMEDCT:235856003][accessDate: 04-11-2010]
GeneRIF:15944310
GeneRIF:15774823
GeneRIF:15653097
Liver Diseases
Liver disorder NOS (disorder)[accessedResource: DOID:409][accessDate: 04-11-2010]
LD - Liver disease[accessedResource: SNOMEDCT:235856003][accessDate: 04-11-2010]
GeneRIF:11810299
SW756
James Malone
Ele Holloway
Fu97
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158848&type=germplasm
CS57824 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158848&type=germplasm
CS57824
James Malone
Capan-2
Capan2
James Malone
Ele Holloway
Caudate Nucleus
NCIt:C12451
obsolete_caudate nucleus
Nucleus Caudatus
An elongated gray mass of the neostriatum located adjacent to the lateral ventricle of the brain. (MeSH)
Nucleus Caudatus[accessedResource: NCIt:C12451][accessDate: 10-05-2010]
Caudate Nucleus[accessedResource: NCIt:C12451][accessDate: 10-05-2010]
An elongated gray mass of the neostriatum located adjacent to the lateral ventricle of the brain. (MeSH)[accessedResource: NCIt:C12451][accessDate: 10-05-2010]
Duplicated term, use EFO_0000907
true
GM12005
James Malone
http://www.ebi.ac.uk/efo/EFO_0001838
CHEBI:50855
antiatherogenic agent
James Malone
MO_912
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#loop_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#loop_design[accessedResource: MO_912][accessDate: 04-11-2010]
loop design
Tomasz Adamusiak
A fold of skin that covers the glans of the penis.[accessedResource: BTO:0001113][accessDate: 04-11-2010]
BTO:0001113
prepuce[accessedResource: BTO:0001113][accessDate: 04-11-2010]
prepuce
foreskin
A fold of skin that covers the glans of the penis.
James Malone
FMAID:7574
rib
Tomasz Adamusiak
CL:0000815
suppressor T-lymphocyte
James Malone
A T cell which regulates overall immune responses as well as the responses of other T cell subsets through direct cell-cell contact and cytokine release.[accessedResource: CL:0000815][accessDate: 04-11-2010]
pancreatic T regulatory cell
suppressor T-lymphocyte[accessedResource: CL:0000815][accessDate: 04-11-2010]
regulatory T lymphocyte
regulatory T-lymphocyte[accessedResource: CL:0000815][accessDate: 04-11-2010]
regulatory T-cell
suppressor T cell[accessedResource: CL:0000815][accessDate: 04-11-2010]
suppressor T-cell
A T cell which regulates overall immune responses as well as the responses of other T cell subsets through direct cell-cell contact and cytokine release.
Inguinal[accessedResource: NCIt:C12726][accessDate: 04-11-2010]
Inguinal
inguinal region
The lower region of the anterior abdominal wall located laterally to the pubic region.
NCIt:C12726
Groin[accessedResource: NCIt:C12726][accessDate: 04-11-2010]
James Malone
The lower region of the anterior abdominal wall located laterally to the pubic region.[accessedResource: NCIt:C12726][accessDate: 04-11-2010]
iliac region
Groin
A plasma cell myeloma lacking clinical manifestations and organ impairment.[accessedResource: NCIt:C7149][accessDate: 04-11-2010]
NCIt:C7149
A plasma cell myeloma lacking clinical manifestations and organ impairment.
Asymptomatic Plasma Cell Myeloma[accessedResource: NCIt:C7149][accessDate: 04-11-2010]
Smoldering Plasma Cell Myeloma[accessedResource: NCIt:C7149][accessDate: 04-11-2010]
smoldering myeloma
asymptomatic myeloma
Smoldering Plasma Cell Myeloma
Smoldering Myeloma[accessedResource: NCIt:C7149][accessDate: 04-11-2010]
Asymptomatic Plasma Cell Myeloma
Tomasz Adamusiak
C2C12
James Malone
Gluteal part of pelvic girdle
FMAID:25245
Gluteal region
Clunis[accessedResource: FMAID:25245][accessDate: 04-11-2010]
Clunis
Tomasz Adamusiak
Gluteal part of pelvic girdle[accessedResource: FMAID:25245][accessDate: 04-11-2010]
Gluteal region[accessedResource: FMAID:25245][accessDate: 04-11-2010]
buttock
FMAID:19234
Vas deferens[accessedResource: FMAID:19234][accessDate: 04-11-2010]
James Malone
TADS:0000486
MA:0000413
MAT:0000129
SAEL:120
deferent duct
WBbt:0005337
deferent duct[accessedResource: MAT:0000129][accessDate: 04-11-2010]
EV:0100105
FBbt:00004968
Vas deferens
vasa deferentia[accessedResource: MAT:0000129][accessDate: 04-11-2010]
ductus deferens
vasa deferentia
EMAPA:18681
Trauma
Damage inflicted on the body as the direct or indirect result of an external force, with or without disruption of structural continuity.[accessedResource: NCIt:C3671][accessDate: 04-11-2010]
injury
Tomasz Adamusiak
NCIt:C3671
Wound[accessedResource: NCIt:C3671][accessDate: 04-11-2010]
James Malone
Trauma[accessedResource: NCIt:C3671][accessDate: 04-11-2010]
Wound
Damage inflicted on the body as the direct or indirect result of an external force, with or without disruption of structural continuity.
embryonic day 13.5
Tomasz Adamusiak
Jie Zheng
FBbt:00005413
A0
"anlagen in statu nascendi" are domains that do not yet coincide 1:1 with a later organ. Anlagen in statu nascendi are typically defined for the early blastoderm by the expression domains of genes which, in the late blastoderm or later, are expressed in specific anlagen, but initially come on in larger domains.
A0[accessedResource: FBbt:00005413][accessDate: 04-11-2010]
"anlagen in statu nascendi" are domains that do not yet coincide 1:1 with a later organ. Anlagen in statu nascendi are typically defined for the early blastoderm by the expression domains of genes which, in the late blastoderm or later, are expressed in specific anlagen, but initially come on in larger domains.[accessedResource: FBbt:00005413][accessDate: 04-11-2010]
anlage in statu nascendi
James Malone
CL:0000549
A nucleated immature erythrocyte, having cytoplasm generally similar to that of the earlier proerythroblast but sometimes even more basophilic, and usually regular in outline. The nucleus is still relatively large, but the chromatin strands are thicker and more deeply staining, giving a coarser appearance; the nucleoli have disappeared. This cell is CD71-positive and lacks hematopoeitic lineage markers.[accessedResource: CL:0000549][accessDate: 04-11-2010]
basophilic normoblast
early normoblast[accessedResource: CL:0000549][accessDate: 04-11-2010]
prorubricyte
basophilic normoblast[accessedResource: CL:0000549][accessDate: 04-11-2010]
early erythroblast[accessedResource: CL:0000549][accessDate: 04-11-2010]
basophilic erythroblast
early erythroblast
prorubricyte[accessedResource: CL:0000549][accessDate: 04-11-2010]
Jie Zheng
early normoblast
A nucleated immature erythrocyte, having cytoplasm generally similar to that of the earlier proerythroblast but sometimes even more basophilic, and usually regular in outline. The nucleus is still relatively large, but the chromatin strands are thicker and more deeply staining, giving a coarser appearance; the nucleoli have disappeared.
Tomasz Adamusiak
A nucleated immature erythrocyte, having cytoplasm generally similar to that of the earlier proerythroblast but sometimes even more basophilic, and usually regular in outline. The nucleus is still relatively large, but the chromatin strands are thicker and more deeply staining, giving a coarser appearance; the nucleoli have disappeared. This cell is CD71-positive and lacks hematopoeitic lineage markers.
CHEBI:23527
http://www.ebi.ac.uk/efo/EFO_0001517
cytochalasin B
[1,4-(N-Acetyl-beta-D-glucosaminyl)]n
CHEBI:17029
InChIKey=WZZVUHWLNMNWLW-IRGKDUGGDK
An aminoglycan that has formula (C8H13NO5)n.
A N-acylglucosamine that has formula (C8H13NO5)n.
http://www.ebi.ac.uk/efo/EFO_0001502
InChI=1/C24H41N3O16/c1-7(31)25-13-18(36)20(11(5-29)39-22(13)38)42-24-15(27-9(3)33)19(37)21(12(6-30)41-24)43-23-14(26-8(2)32)17(35)16(34)10(4-28)40-23/h10-24,28-30,34-38H,4-6H2,1-3H3,(H,25,31)(H,26,32)(H,27,33)/t10-,11-,12-,13-,14-,15-,16-,17-,18-,19-,20-,21-,22-,23+,24+/m1/s1/f/h25-27H
chitin
(1->4)-2-acetamido-2-deoxy-beta-D-glucan
(C8H13NO5)n
beta-1,4-Poly-N-acetyl-D-glucosamine
[4)-beta-D-GlcpNAc(1->]n
GeneRIF:14671199
Multicystic ovaries
PCOS - Polycystic ovarian syndrome[accessedResource: SNOMEDCT:69878008][accessDate: 04-11-2010]
GeneRIF:15695318
GeneRIF:15926113
A complex disorder characterized by infertility, HIRSUTISM; OBESITY; and various menstrual disturbances such as OLIGOMENORRHEA; AMENORRHEA; ANOVULATION. Polycystic ovary syndrome is usually associated with bilateral enlarged ovaries studded with atretic follicles, not with cysts. The term, polycystic ovary, is misleading.
GeneRIF:15588467
GeneRIF:14764797
GeneRIF:15057670
GeneRIF:12857431
Polycystic ovaries
PCOS
GeneRIF:16213847
NCIt:C27086
Polycystic ovaries (disorder)
polycystic ovary syndrome
GeneRIF:15516780
GeneRIF:15862282
GeneRIF:15240646
James Malone
Sclerocystic Ovary Syndrome[accessedResource: MSH:D011085][accessDate: 04-11-2010]
Cystic disease of ovaries
MSH:D011085
GeneRIF:14688155
GeneRIF:16084882
Ovaries, Sclerocystic
PCO - Polycystic ovaries[accessedResource: SNOMEDCT:69878008][accessDate: 04-11-2010]
GeneRIF:15292352
Sclerocystic Ovary Syndrome
GeneRIF:14669168
GeneRIF:15533361
GeneRIF:12849814
GeneRIF:12574198
GeneRIF:12364442
GeneRIF:12050223
Sclerocystic Ovarian Degeneration
PCO - Polycystic ovaries
Polycystic ovarian disease
GeneRIF:15598676
GeneRIF:12161545
GeneRIF:12213887
Polycystic Ovarian Disease[accessedResource: NCIt:C26862][accessDate: 04-11-2010]
GeneRIF:14671189
Ovary, Sclerocystic
GeneRIF:15653207
GeneRIF:12923129
GeneRIF:15731326
GeneRIF:14671186
GeneRIF:12396555
Polycystic ovarian syndrome
GeneRIF:12615821
NCIt:C26862
GeneRIF:12857430
Stein-Leventhal Syndrome
Ovarian Degeneration, Sclerocystic[accessedResource: MSH:D011085][accessDate: 04-11-2010]
GeneRIF:12477518
GeneRIF:14602801
GeneRIF:12679434
polycystic ovary[accessedResource: DOID:11612][accessDate: 04-11-2010]
Syndrome, Stein-Leventhal[accessedResource: MSH:D011085][accessDate: 04-11-2010]
Ovaries, Sclerocystic[accessedResource: MSH:D011085][accessDate: 04-11-2010]
GeneRIF:15178661
GeneRIF:14684846
Stein-Leventhal synd.[accessedResource: DOID:11612][accessDate: 04-11-2010]
GeneRIF:15985479
PCOD - Polycystic ovarian disease
GeneRIF:14671196
GeneRIF:15950665
GeneRIF:12620441
Polycystic ovaries (disorder)[accessedResource: DOID:11612][accessDate: 04-11-2010]
GeneRIF:15191349
polycystic ovary
GeneRIF:15233555
GeneRIF:15624269
GeneRIF:12519859
ICD9:256.4
GeneRIF:14561641
GeneRIF:15950642
GeneRIF:15010862
PCOS - Polycystic ovarian syndrome
GeneRIF:16159937
SNOMEDCT:69878008
PCOD - Polycystic ovarian disease[accessedResource: SNOMEDCT:69878008][accessDate: 04-11-2010]
GeneRIF:15886251
GeneRIF:14764802
GeneRIF:15374726
GeneRIF:15155816
Multicystic ovaries[accessedResource: DOID:11612][accessDate: 04-11-2010]
GeneRIF:14644808
PCOS[accessedResource: DOID:11612][accessDate: 04-11-2010]
DOID:11612
GeneRIF:11809921
GeneRIF:15757855
A complex disorder characterized by infertility, HIRSUTISM; OBESITY; and various menstrual disturbances such as OLIGOMENORRHEA; AMENORRHEA; ANOVULATION. Polycystic ovary syndrome is usually associated with bilateral enlarged ovaries studded with atretic follicles, not with cysts. The term, polycystic ovary, is misleading.[accessedResource: MSH:D011085][accessDate: 04-11-2010]
GeneRIF:16030171
Polycystic ovarian syndrome[accessedResource: SNOMEDCT:69878008][accessDate: 04-11-2010]
Ovary, Sclerocystic[accessedResource: MSH:D011085][accessDate: 04-11-2010]
GeneRIF:16275260
GeneRIF:14715867
Cystic disease of ovaries[accessedResource: SNOMEDCT:69878008][accessDate: 04-11-2010]
GeneRIF:15333250
GeneRIF:15705377
Polycystic ovaries[accessedResource: DOID:11612][accessDate: 04-11-2010]
GeneRIF:15579759
GeneRIF:15533384
GeneRIF:12727985
Stein-Leventhal synd.
GeneRIF:12161543
GeneRIF:12502516
An aggressive carcinoma with a poor prognosis characterized by a presence of both malignant squamous cells and glandular cells.[accessedResource: NCIt:C9133][accessDate: 04-11-2010]
An aggressive carcinoma with a poor prognosis characterized by a presence of both malignant squamous cells and glandular cells.
adenosquamous lung carcinoma
NCIt:C9133
adenosquamous cell lung carcinoma
James Malone
adenosquamous cell lung carcinoma[accessedResource: DOID:4829][accessDate: 04-11-2010]
DOID:4829
THP1
THP-1
James Malone
CHEBI:25048
linolenic acids
linolenic acid
http://www.ebi.ac.uk/efo/EFO_0001563
Any of two trienoic essential fatty acids; a nutrient essential to the formation of prostaglandins. Also used in making paints and synthetic resins.
linoleic acids
4-hydroxy-2-nonenal
InChI=1/C9H16O2/c1-2-3-4-6-9(11)7-5-8-10/h5,7-9,11H,2-4,6H2,1H3
4-Hydroxynonenal
A hydroxyaldehyde that has formula C9H16O2.
C9H16O2
4-Hydroxy-2,3-nonenal
http://www.ebi.ac.uk/efo/EFO_0001472
CHEBI:32585
InChIKey=JVJFIQYAHPMBBX-UHFFFAOYAI
4-hydroxynon-2-enal
[H]C(=CC=O)C(O)CCCCC
DOID:3908
Non-small cell lung cancer (disorder)
NSCLC
Non-small cell lung cancer (disorder)[accessedResource: DOID:3908][accessDate: 04-11-2010]
NSCLC[accessedResource: DOID:3908][accessDate: 04-11-2010]
non-small cell lung carcinoma
Tomasz Adamusiak
A disease of or relating to the manner that an organism conducts itself involving action and response to stimulation or the response of an individual, group, or species to its environment.
Other disorders of eating[accessedResource: ICD9:307.59][accessDate: 10-05-2010]
GeneRIF:12556907
EATING DISORDER NEC[accessedResource: ICD9:307.59][accessDate: 10-05-2010]
Psychiatric disorder
SNOMEDCT:192639003
ICD9:307
Other disorders of eating
Mental disorders NOS (disorder)
ICD9:307.9
GeneRIF:15386212
true
EATING DISORDER NEC
Mental disease[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
Other and unspecified special symptoms or syndromes, not elsewhere classified[accessedResource: ICD9:307.9][accessDate: 10-05-2010]
Mental disorder, NOS[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
[X]Mental illness NOS
GeneRIF:12082566
Psychiatric illness
[X]Mental illness NOS[accessedResource: SNOMEDCT:192637001][accessDate: 10-05-2010]
GeneRIF:14744462
[X]Other eating disorders (disorder)
SNOMEDCT:74732009
Other and unspecified special symptoms or syndromes, not elsewhere classified
SPECIAL SYMPTOM NEC/NOS
[X]Mental disorder, not otherwise specified
Mental health disorder
GeneRIF:12218657
DOID:150
James Malone
Mental disorder[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
GeneRIF:11884350
Mental health disorder[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
GeneRIF:14645456
[X]Other eating disorders (disorder)[accessedResource: SNOMEDCT:268721001][accessDate: 10-05-2010]
obsolete_behavioural disease
ICD9:307.59
Mental disorders NOS
behavioral disease
SNOMEDCT:268721001
[X]Other eating disorders
SPECIAL SYMPTOM NEC/NOS[accessedResource: ICD9:307.9][accessDate: 10-05-2010]
GeneRIF:14966479
Mental disease
[X]Other eating disorders[accessedResource: SNOMEDCT:268721001][accessDate: 10-05-2010]
GeneRIF:12605098
[X]Mental disorder, not otherwise specified (disorder)[accessedResource: SNOMEDCT:192637001][accessDate: 10-05-2010]
GeneRIF:14523627
ICD9:290-319.99
[X]Mental disorder, not otherwise specified[accessedResource: SNOMEDCT:192637001][accessDate: 10-05-2010]
Mental disorders NOS[accessedResource: SNOMEDCT:192639003][accessDate: 10-05-2010]
GeneRIF:12814372
GeneRIF:15341606
Psychiatric illness[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
Mental disorder, NOS
Mental disorder (disorder)[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
ICD9:307.5
Mental illness[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
Mental illness
ICD9:300-316.99
Mental disorder (disorder)
A disease of or relating to the manner that an organism conducts itself involving action and response to stimulation or the response of an individual, group, or species to its environment.[accessedResource: DOID:150][accessDate: 10-05-2010]
Mental disorder
Mental disorders NOS (disorder)[accessedResource: SNOMEDCT:192639003][accessDate: 10-05-2010]
Psychiatric disorder[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
merged with EFO_0000677
SNOMEDCT:192637001
2.5
[X]Mental disorder, not otherwise specified (disorder)
GM12891
true
chronic lymphoid leukemia
CLL
obsolete_chronic lymphocytic leukemia
OntologyMappingImporter following DOID:1040
James Malone
Duplicate with chronic lymphocytic leukemia (EFO_0000095) use this instead
James Malone
SNOMEDCT:362968007
Disorder of reproductive system (disorder)
reproductive system disease
genital system disease[accessedResource: DOID:15][accessDate: 04-11-2010]
Non-neoplastic Reproductive system disease[accessedResource: DOID:15][accessDate: 04-11-2010]
Disorder of reproductive system
Tomasz Adamusiak
DOID:15
genital system disease
Non-neoplastic Reproductive system disease
Disorder of reproductive system (disorder)[accessedResource: SNOMEDCT:362968007][accessDate: 04-11-2010]
Disorder of reproductive system[accessedResource: SNOMEDCT:362968007][accessDate: 04-11-2010]
In adult pterygotous insects, one of the paired organs of flight occurring on the mesothoracic segment.
James Malone
adult mesothoracic wing
A flight organ of the adult external thorax that is derived from a dorsal mesothoracic disc.
adult metathoracic wing
TGMA:0000197
wing
FBbt:00004729
adult metathoracic wing[accessedResource: MAT:0000202][accessDate: 04-11-2010]
In adult pterygotous insects, the paired organs of flight occurring on the metathoracic segment. In Diptera, the metathoracic wings are represented by the halteres.
TGMA:0000196
In adult pterygotous insects, one of the paired organs of flight occurring on the mesothoracic segment.[accessedResource: TGMA:0000196][accessDate: 04-11-2010]
adult mesothoracic wing[accessedResource: TGMA:0000196][accessDate: 04-11-2010]
MAT:0000202
BTO:0001463
1: One of the movable feathered or membranous paired appendages by means of which a bird, bat, or insect is able to fly; also: such an appendage even though rudimentary if possessed by an animal belonging to a group characterized by the power of flight.n2: Any of various anatomical structures especially of a flying fish or flying lemur providing means of limited flight.
A flight organ of the adult external thorax that is derived from a dorsal mesothoracic disc.[accessedResource: FBbt:00004729][accessDate: 04-11-2010]
In adult pterygotous insects, the paired organs of flight occurring on the metathoracic segment. In Diptera, the metathoracic wings are represented by the halteres.[accessedResource: TGMA:0000197][accessDate: 04-11-2010]
1: One of the movable feathered or membranous paired appendages by means of which a bird, bat, or insect is able to fly; also: such an appendage even though rudimentary if possessed by an animal belonging to a group characterized by the power of flight.n2: Any of various anatomical structures especially of a flying fish or flying lemur providing means of limited flight.[accessedResource: BTO:0001463][accessDate: 04-11-2010]
oral squamous cell carcinoma
James Malone
CHEBI:46661
asbesto
Asbest
http://www.ebi.ac.uk/efo/EFO_0001490
Fibrous incombustible mineral composed of magnesium and calcium silicates with or without other elements.
asbestos
http://www.arabidopsis.org/servlets/TairObject?id=1005158908&type=germplasm
CS57884 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158908&type=germplasm
CS57884
James Malone
B-0 B cell[accessedResource: CL:0000822][accessDate: 04-11-2010]
A conventional B cell subject to antigenic stimulation and dependent on T cell help and with a distinct surface marker expression pattern from B-1 B cells. These cells are CD43-negative.
B-2 B lymphocyte[accessedResource: CL:0000822][accessDate: 04-11-2010]
B-2 B cell
small pre-BII cell
follicular B cell
follicular B cell[accessedResource: CL:0000822][accessDate: 04-11-2010]
B-0 B cell
A conventional B cell subject to antigenic stimulation and dependent on T cell help and with a distinct surface marker expression pattern from B-1 B cells. These cells are CD43-negative.[accessedResource: CL:0000822][accessDate: 04-11-2010]
CL:0000822
large pre-BII cell
James Malone
B-2 B lymphocyte
A leukocyte with a single non-segmented nucleus in the mature form.[accessedResource: CL:0000842][accessDate: 04-11-2010]
CL:0000842
James Malone
A cell having only one nucleus, especially: MONOCYTE.
A cell having only one nucleus, especially: MONOCYTE.[accessedResource: BTO:0000878][accessDate: 04-11-2010]
peripheral blood mononuclear cell
A leukocyte with a single non-segmented nucleus in the mature form.
Peripheral blood mononuclear cell[accessedResource: CL:0000842][accessDate: 04-11-2010]
BTO:0000878
mononuclear cell
MAT:0000350
sap
James Malone
DMS273
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0001590
C19H24N4O2
A carboxamidine that has formula C19H24N4O2.
4,4'-(1,5-pentanediylbis(oxy))bis-benzenecarboximidamide
4,4'-[pentane-1,5-diylbis(oxy)]dibenzenecarboximidamide
p,p'-(pentamethylenedioxy)dibenzamidine
CHEBI:45081
InChIKey=XDRYMKDFEDOLFX-JODGMDMNCA
InChI=1/C19H24N4O2/c20-18(21)14-4-8-16(9-5-14)24-12-2-1-3-13-25-17-10-6-15(7-11-17)19(22)23/h4-11H,1-3,12-13H2,(H3,20,21)(H3,22,23)/f/h20,22H,21,23H2
pentamidine
4,4'-(pentamethylenedioxy)dibenzamidine
1,5-bis(4-amidinophenoxy)pentane
NC(=N)c1ccc(OCCCCCOc2ccc(cc2)C(N)=N)cc1
ZR75B
James Malone
WB-F344
James Malone
Ele Holloway
NCIt:C32824
FMA:13354
Respiratory Muscles
Respiratory Muscles[accessedResource: NCIt:C32824][accessDate: 04-11-2010]
intercostal muscle
James Malone
simple cystadenoma
James Malone
Ele Holloway
NCI-H1092
James Malone
Ele Holloway
ENCODE cell line
CL:0002321
A cell of the embryo.
A cell of the embryo.[accessedResource: CL:0002321][accessDate: 04-11-2010]
embryonic cell
Tomasz Adamusiak
2.5
true
obsolete_myelodysplastic syndrome (MDS)-like
use EFO_0000198
http://jaxmice.jax.org/strain/009292.html
ILSXISS114/TejJ
Tomasz Adamusiak
BTO:0001143
An intermediate usually quiescent stage of a metamorphic insect (as a bee, moth, or beetle) that occurs between the larva and the imago, is usually enclosed in a cocoon or protective covering, and undergoes internal changes by which larval structures are replaced by those typical of the imago.
An intermediate usually quiescent stage of a metamorphic insect (as a bee, moth, or beetle) that occurs between the larva and the imago, is usually enclosed in a cocoon or protective covering, and undergoes internal changes by which larval structures are replaced by those typical of the imago.[accessedResource: BTO:0001143][accessDate: 04-11-2010]
pupa
NCI-H2122
James Malone
Ele Holloway
FMAID:16202
Sacrum [sacral vertebrae I - V]
Sacral bone
Sacrum [sacral vertebrae I - V][accessedResource: FMAID:16202][accessDate: 04-11-2010]
Sacral bone[accessedResource: FMAID:16202][accessDate: 04-11-2010]
sacrum
Tomasz Adamusiak
lipoxin A4
5S,6R,15S-Trihydroxy-7E,9E,11Z,13E-eicosatetraenoic acid
LXA4
5S,6R-LipoxinA4
NIFSTD:nifext_5168
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001565
(5S,6R,7E,9E,11Z,13E,15S)-5,6,15-trihydroxyicosa-7,9,11,13-tetraenoic acid
CCCCC[C@H](O)\\C=C\\C=C/C=C/C=C/[C@@H](O)[C@@H](O)CCCC(O)=O
InChI=1/C20H32O5/c1-2-3-8-12-17(21)13-9-6-4-5-7-10-14-18(22)19(23)15-11-16-20(24)25/h4-7,9-10,13-14,17-19,21-23H,2-3,8,11-12,15-16H2,1H3,(H,24,25)/b6-4-,7-5+,13-9+,14-10+/t17-,18+,19-/m0/s1/f/h24H
A lipoxin that has formula C20H32O5.
InChIKey=IXAQOQZEOGMIQS-RKIRPOAEDD
C20H32O5
IBL4
James Malone
Ele Holloway
An alpha-tocopherol that has formula C29H50O2.
(2R)-2,5,7,8-tetramethyl-2-[(4R,8R)-4,8,12-trimethyltridecyl]-3,4-dihydro-2H-chromen-6-ol
CHEBI:18145
InChI=1/C29H50O2/c1-20(2)12-9-13-21(3)14-10-15-22(4)16-11-18-29(8)19-17-26-25(7)27(30)23(5)24(6)28(26)31-29/h20-22,30H,9-19H2,1-8H3/t21-,22-,29-/m1/s1
(2R,4'R,8'R)-alpha-tocopherol
CC(C)CCC[C@@H](C)CCC[C@@H](C)CCC[C@]1(C)CCc2c(C)c(O)c(C)c(C)c2O1
5,7,8-trimethyltocol
(2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL
InChIKey=GVJHHUAWPYXKBD-IEOSBIPEBS
d-alpha-tocopherol
(R,R,R)-alpha-tocopherol
James Malone
(+)-alpha-tocopherol
Vitamin E
C29H50O2
http://www.ebi.ac.uk/efo/EFO_0001465
James Malone
Metepencephalon[accessedResource: FMAID:62004][accessDate: 04-11-2010]
EMAPA:17550
Brain structure that is located ventrocaudal to the cerebellum and just anterior to the spinal cord and contains the sensory and motor nuclei of six cranial nerves. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished here.
Organ component of neuraxis that has as its parts the medullary reticular formation, inferior olivary complex and cochlear nuclear complex, among other structures. Examples: There is only one medulla oblongata.
EHDAA:7588
BTO:0000041
medulla oblonmgata
NIFSTD:birnlex_957
Bulb
Brain structure that is located ventrocaudal to the cerebellum and just anterior to the spinal cord and contains the sensory and motor nuclei of six cranial nerves. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished here.[accessedResource: ZFA:0000545][accessDate: 04-11-2010]
Tomasz Adamusiak
The part of the vertebrate brain that is continuous posteriorly with the spinal cord and that contains the centers controlling involuntary vital functions.
The part of the vertebrate brain that is continuous posteriorly with the spinal cord and that contains the centers controlling involuntary vital functions.[accessedResource: BTO:0000041][accessDate: 04-11-2010]
brainstem
medulla oblongata
myelencephalon[accessedResource: NIFSTD:birnlex_957][accessDate: 04-11-2010]
medulla[accessedResource: NIFSTD:birnlex_957][accessDate: 04-11-2010]
SAEL:65
SAEL:13
FMAID:62004
myelencephalon
medulla oblonmgata[accessedResource: MAT:0000111][accessDate: 04-11-2010]
medulla
Bulb[accessedResource: FMAID:62004][accessDate: 04-11-2010]
MAT:0000111
brainstem[accessedResource: MAT:0000111][accessDate: 04-11-2010]
MA:0000206
EV:0100275
Metepencephalon
ZFA:0000545
TAO:0000545
http://www.arabidopsis.org/servlets/TairObject?id=1005158847&type=germplasm
CS57823 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158847&type=germplasm
CS57823
James Malone
pyrethroid ester insecticides
http://www.ebi.ac.uk/efo/EFO_0001873
CHEBI:39116
pyrethroid ester insecticide
James Malone
FBbt:00005072
circular visceral muscle fiber
circular visceral muscle fiber[accessedResource: FBbt:00005072][accessDate: 04-11-2010]
circular visceral muscle fibers
James Malone
chronic hepatitis C[accessedResource: DOID:1883][accessDate: 04-11-2010]
chronic hepatitis C
acute hepatitis C with hepatic coma[accessedResource: DOID:1883][accessDate: 04-11-2010]
DOID:1883
acute hepatitis C with hepatic coma
A Hepacivirus infectious disease which is a chronic bloodborne infectious disease caused by Hepatitis C virus. The symptoms include fever, fatigue, loss of appetite, nausea, vomiting, abdominal pain, clay-colored bowel movements, joint pain and jaundice.
Tomasz Adamusiak
Viral hepatitis C (disorder)[accessedResource: DOID:1883][accessDate: 04-11-2010]
Viral hepatitis C[accessedResource: DOID:1883][accessDate: 04-11-2010]
NANBH[accessedResource: DOID:1883][accessDate: 04-11-2010]
NANBH
Hepatitis non-A non-B (disorder)[accessedResource: DOID:1883][accessDate: 04-11-2010]
Viral hepatitis C (disorder)
chronic hepatitis C with hepatic coma[accessedResource: DOID:1883][accessDate: 04-11-2010]
hepatitis C
hepatitis nonA nonB
Hepatitis C (disorder)
chronic hepatitis C with hepatic coma
Viral hepatitis C
A Hepacivirus infectious disease which is a chronic bloodborne infectious disease caused by Hepatitis C virus. The symptoms include fever, fatigue, loss of appetite, nausea, vomiting, abdominal pain, clay-colored bowel movements, joint pain and jaundice.[accessedResource: DOID:1883][accessDate: 04-11-2010]
chronic viral hepatitis C[accessedResource: DOID:1883][accessDate: 04-11-2010]
Hepatitis non-A non-B (disorder)
hepatitis nonA nonB[accessedResource: DOID:1883][accessDate: 04-11-2010]
chronic type C viral hepatitis[accessedResource: DOID:1883][accessDate: 04-11-2010]
chronic viral hepatitis C
Hepatitis C (disorder)[accessedResource: DOID:1883][accessDate: 04-11-2010]
chronic type C viral hepatitis
http://www.arabidopsis.org/servlets/TairObject?id=1005158607&type=germplasm
CS57583 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158607&type=germplasm
CS57583
James Malone
ZFS:0000033
Hatching:Long-pec
Hatching:Long-pec[accessedResource: ZFS:0000033][accessDate: 04-11-2010]
hatching stage
James Malone
PLB985
James Malone
Ele Holloway
C22H24ClFN4O3
Iressa
James Malone
N-(3-chloro-4-fluorophenyl)-7-methoxy-6-(3-morpholin-4-ylpropoxy)quinazolin-4-amine
gefitinib
CHEBI:49668
A quinazoline that has formula C22H24ClFN4O3.
InChI=1/C22H24ClFN4O3/c1-29-20-13-19-16(12-21(20)31-8-2-5-28-6-9-30-10-7-28)22(26-14-25-19)27-15-3-4-18(24)17(23)11-15/h3-4,11-14H,2,5-10H2,1H3,(H,25,26,27)/f/h27H
http://www.ebi.ac.uk/efo/EFO_0001541
N-(3-chloro-4-fluorophenyl)-7-methoxy-6-(3-(4-morpholinyl)propoxy)-4-quinazolinamine
COc1cc2ncnc(Nc3ccc(F)c(Cl)c3)c2cc1OCCCN1CCOCC1
4-(3'-chloro-4'-fluoroanilino)-7-methoxy-6-(3-morpholinopropoxy)quinazoline
ZD 1839
InChIKey=XGALLCVXEZPNRQ-LELJVTLKCM
GM11832
James Malone
GM11830
James Malone
an increase in size of the cardiac tissue, not due to increased cell number
an increase in size of the cardiac tissue, not due to increased cell number[accessedResource: MP:0001625][accessDate: 04-11-2010]
James Malone
MP:0001625
myocardial hypertrophy
cardiac hypertrophy
Ele Holloway
A mechanoreceptor cell located in the inner ear that is sensitive to auditory stimuli. The accessory sensory structures are arranged so that appropriate stimuli cause movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system.[accessedResource: CL:0000202][accessDate: 04-11-2010]
auditory hair cell
A mechanoreceptor cell located in the inner ear that is sensitive to auditory stimuli. The accessory sensory structures are arranged so that appropriate stimuli cause movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system.
A mechanoreceptor cell located in the organ of Corti that is sensitive to auditory stimuli and in the vestibular apparatus that is sensitive to movement of the head. In each case the accessory sensory structures are arranged so that appropriate stimuli cause movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system.
auditory receptor cell
NIFSTD:sao630986029
Tomasz Adamusiak
auditory receptor cell[accessedResource: CL:0000202][accessDate: 04-11-2010]
cochlear hair cell
auditory hair cell[accessedResource: CL:0000202][accessDate: 04-11-2010]
James Malone
CL:0000202
anticholesteremic
A substance used to lower plasma cholesterol levels.
anticholesteremic drugs
http://www.ebi.ac.uk/efo/EFO_0001856
anticholesteremic drug
hypocholesteremic agent
James Malone
anticholesteremic agent
CHEBI:35821
cholesterol inhibitor
MO_902
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#disease_state_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#disease_state_design[accessedResource: MO_902][accessDate: 04-11-2010]
disease state design
Tomasz Adamusiak
1,10-phenanthroline
o-Phenanthroline
phen
A phenanthroline that has formula C12H8N2.
http://www.ebi.ac.uk/efo/EFO_0002483
Ele Holloway
InChIKey=DGEZNRSVGBDHLK-UHFFFAOYAW
c1cnc2c(c1)ccc1cccnc21
CHEBI:44975
4,5-diazaphenanthrene
James Malone
orthophenanthroline
C12H8N2
InChI=1/C12H8N2/c1-3-9-5-6-10-4-2-8-14-12(10)11(9)13-7-1/h1-8H
A bipyridine that has formula C10H8N2.
alpha,alpha'-bipyridine
alpha,alpha'-dipyridine
Ele Holloway
2-(2-pyridyl)pyridine
c1ccc(nc1)-c1ccccn1
alpha,alpha'-bipyridyl
2,2'-bipyridine
2,2'-dipyridine
2,2'-bipyridyl
InChI=1/C10H8N2/c1-3-7-11-9(5-1)10-6-2-4-8-12-10/h1-8H
http://www.ebi.ac.uk/efo/EFO_0002723
C10H8N2
alpha,alpha'-dipyridyl
2,2'-dipyridyl
bpy
CHEBI:30351
Tomasz Adamusiak
2,2'-Bipyridin
InChIKey=ROFVEXUMMXZLPA-UHFFFAOYAP
CC531
James Malone
phenotype is synonymous with quality
true
obsolete_phenotypic factor
ArrayExpress production team
metabolimic profiling
An assay in which one or more metabolites are analysed.
metabolomic profiling
James Malone
InChIKey=JLRGJRBPOGGCBT-KGCNKATMCC
http://www.ebi.ac.uk/efo/EFO_0001626
C12H18N2O3S
CCCCNC(=O)NS(=O)(=O)c1ccc(C)cc1
tolbutamide
CHEBI:27999
N-Butyl-N'-(4-methylphenylsulfonyl)urea
1-Butyl-3-(p-tolylsulfonyl)urea
N-Butyl-N'-(p-tolylsulfonyl)urea
N-[(butylamino)carbonyl]-4-methylbenzenesulfonamide
InChI=1/C12H18N2O3S/c1-3-4-9-13-12(15)14-18(16,17)11-7-5-10(2)6-8-11/h5-8H,3-4,9H2,1-2H3,(H2,13,14,15)/f/h13-14H
1-Butyl-3-tosylurea
An urea that has formula C12H18N2O3S.
N-n-Butyl-N'-tosylurea
N-(4-Methylphenylsulfonyl)-N'-butylurea
Orinase (TN)
1-Butyl-3-(p-methylphenylsulfonyl)urea
MO_527
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#individual_genetic_characteristics_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#individual_genetic_characteristics_design[accessedResource: MO_527][accessDate: 04-11-2010]
genotype design
Tomasz Adamusiak
An instrument design which describes the design of the array.
array design
James Malone
GRO:0005342[accessedResource: BTO:0000613][accessDate: 04-11-2010]
James Malone
The part of the axis of a plant embryo or seedling below the cotyledon.[accessedResource: BTO:0000613][accessDate: 04-11-2010]
GRO:0005342
PO:0020100
BTO:0000613
The part of the axis of a plant embryo or seedling below the cotyledon.
hypocotyl
HMEC184
James Malone
Tomasz Adamusiak
The total sum of the genetic information of an organism that is known and relevant to the experiment being performed, including chromosomal, plasmid, viral or other genetic material which has been introduced into the organism either prior to or during the experiment.
Information, making the distinction between the actual physical material (e.g. a cell) and the information about the genetic content (genotype).
NIFSTD:birnlex_2023
James Malone
genotype
Jie Zheng
MO_51
FMAID:6670
renal branch of vagus nerve
Tomasz Adamusiak
Jie Zheng
MAT:0000152
A sensillum with a long, unicellular, setiform outgrowth that is strongly chitinized.[accessedResource: FBbt:00005177][accessDate: 04-11-2010]
chaeta[accessedResource: FBbt:00005177][accessDate: 04-11-2010]
FBbt:00005177
chaeta
A sensillum with a long, unicellular, setiform outgrowth that is strongly chitinized.
James Malone
sensory bristle
sensillum chaeticum
sensillum chaeticum[accessedResource: FBbt:00005177][accessDate: 04-11-2010]
GM12004
James Malone
A class of traumatic stress disorders with symptoms that last more than one month. There are various forms of post-traumatic stress disorder, depending on the time of onset and the duration of these stress symptoms. In the acute form, the duration of the symptoms is between 1 to 3 months. In the chronic form, symptoms last more than 3 months. With delayed onset, symptoms develop more than 6 months after the traumatic event (MeSH).
Stress Disorders, Post Traumatic[accessedResource: MSH:D013313][accessDate: 04-11-2010]
SNOMEDCT:47505003
Stress Disorder, Posttraumatic
ACUTE POST TRAUMATIC STRESS DIS[accessedResource: MSH:D013313][accessDate: 04-11-2010]
Delayed Onset Post-Traumatic Stress Disorder[accessedResource: MSH:D013313][accessDate: 04-11-2010]
CHRONIC POST TRAUMATIC STRESS DIS
POSTTRAUMATIC STRESS DIS[accessedResource: ICD9:309.81][accessDate: 04-11-2010]
Posttraumatic stress disorder[accessedResource: ICD9:309.81][accessDate: 04-11-2010]
PTSD[accessedResource: MSH:D013313][accessDate: 04-11-2010]
ACUTE POST TRAUMATIC STRESS DIS
POSTTRAUMATIC STRESS DISORDERS
Acute Post-Traumatic Stress Disorder
POSTTRAUMATIC STRESS DIS
PTSD - Post-traumatic stress disorder
Chronic Post-Traumatic Stress Disorder
Posttraumatic stress disorder (disorder)[accessedResource: SNOMEDCT:47505003][accessDate: 04-11-2010]
NCIt:C3389
DELAYED ONSET POST TRAUMATIC STRESS DIS[accessedResource: MSH:D013313][accessDate: 04-11-2010]
Post Traumatic Stress Disorders
Chronic Post-Traumatic Stress Disorder[accessedResource: MSH:D013313][accessDate: 04-11-2010]
traumatic neurosis
A class of traumatic stress disorders with symptoms that last more than one month. There are various forms of post-traumatic stress disorder, depending on the time of onset and the duration of these stress symptoms. In the acute form, the duration of the symptoms is between 1 to 3 months. In the chronic form, symptoms last more than 3 months. With delayed onset, symptoms develop more than 6 months after the traumatic event.[accessedResource: MSH:D013313][accessDate: 04-11-2010]
Post-traumatic stress syndrome[accessedResource: SNOMEDCT:47505003][accessDate: 04-11-2010]
post-traumatic stress disorder
Posttraumatic stress disorder (disorder)
MSH:D013313
Post-traumatic stress syndrome
Traumatic neurosis[accessedResource: SNOMEDCT:47505003][accessDate: 04-11-2010]
GeneRIF:12232785
NIFSTD:birnlex_12679
Tomasz Adamusiak
A class of traumatic stress disorders with symptoms that last more than one month. There are various forms of post-traumatic stress disorder, depending on the time of onset and the duration of these stress symptoms. In the acute form, the duration of the symptoms is between 1 to 3 months. In the chronic form, symptoms last more than 3 months. With delayed onset, symptoms develop more than 6 months after the traumatic event (MeSH).[accessedResource: NIFSTD:birnlex_12679][accessDate: 04-11-2010]
Post-Traumatic Neurosis[accessedResource: NIFSTD:birnlex_12679][accessDate: 04-11-2010]
James Malone
STRESS DIS POST TRAUMATIC[accessedResource: MSH:D013313][accessDate: 04-11-2010]
PTSD
Posttraumatic stress disorder, NOS
Neuroses, Post Traumatic[accessedResource: MSH:D013313][accessDate: 04-11-2010]
DOID:2055
Post-Traumatic Neurosis
DELAYED ONSET POST TRAUMATIC STRESS DIS
Neuroses, Post Traumatic
ICD9:309.81
POST TRAUMATIC STRESS DIS
Posttraumatic stress disorder NOS[accessedResource: DOID:2055][accessDate: 04-11-2010]
Delayed Onset Post Traumatic Stress Disorder
PTSD - Post-traumatic stress disorder[accessedResource: SNOMEDCT:47505003][accessDate: 04-11-2010]
POSTTRAUMATIC STRESS DISORDERS[accessedResource: MSH:D013313][accessDate: 04-11-2010]
CHRONIC POST TRAUMATIC STRESS DIS[accessedResource: MSH:D013313][accessDate: 04-11-2010]
A class of traumatic stress disorders with symptoms that last more than one month. There are various forms of post-traumatic stress disorder, depending on the time of onset and the duration of these stress symptoms. In the acute form, the duration of the symptoms is between 1 to 3 months. In the chronic form, symptoms last more than 3 months. With delayed onset, symptoms develop more than 6 months after the traumatic event.
Acute Post Traumatic Stress Disorder[accessedResource: MSH:D013313][accessDate: 04-11-2010]
NCIt:C52814
Any one of the three (Common, Deep, and Superficial) peroneal nerves.
Any one of the three (Common, Deep, and Superficial) peroneal nerves.[accessedResource: NCIt:C52814][accessDate: 04-11-2010]
peroneal nerve
Tomasz Adamusiak
NCI Metathesaurus http://ncimeta.nci.nih.gov/MetaServlet/ResultServlet?cui=C0039082 Date accessed: 30th October 2007
A set of symptoms or conditions that occur together and suggest the presence of a certain disease or an increased chance of developing the disease.
doesnt' fit in the revised disease classification
true
James Malone
2.5
obsolete_syndrome
http://www.arabidopsis.org/servlets/TairObject?id=1005158645&type=germplasm
CS57621 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158645&type=germplasm
CS57621
James Malone
MAT:0000189
SAEL:17
BTO:0000206
A specialized, fibrous connective tissue, forming most of the temporary skeleton of the embryo, providing a model in which most of the bones develop, and constituting an important part of the growth mechanism of the organism. It exists in several types, the most important of which are hyaline cartilage, elastic cartilage, and fibrocartilage. Also used as a general term to designate a mass of such tissue in a particular site in the body.
MA:0000104
EV:0100141
Portion of tissue which is connective tissue composed of collagen and/or elastin fibers and chondrocytes. Cartilage is avascular and provides both skeletal functions and a framework upon which bone is deposited.
TAO:0001501
Portion of tissue which is connective tissue composed of collagen and/or elastin fibers and chondrocytes. Cartilage is avascular and provides both skeletal functions and a framework upon which bone is deposited.[accessedResource: TAO:0001501][accessDate: 04-11-2010]
cartilage
A specialized, fibrous connective tissue, forming most of the temporary skeleton of the embryo, providing a model in which most of the bones develop, and constituting an important part of the growth mechanism of the organism. It exists in several types, the most important of which are hyaline cartilage, elastic cartilage, and fibrocartilage. Also used as a general term to designate a mass of such tissue in a particular site in the body.[accessedResource: BTO:0000206][accessDate: 04-11-2010]
James Malone
XAO:0000170
birnlex_7076
Theiler stage 21
Tomasz Adamusiak
Jie Zheng
GM12872
James Malone
GeneRIF:15070774
GeneRIF:12900510
GeneRIF:15820830
GeneRIF:15340140
GeneRIF:16048634
GeneRIF:15044606
James Malone
GeneRIF:15220464
GeneRIF:12606378
Infertile[accessedResource: DOID:5223][accessDate: 04-11-2010]
GeneRIF:15345679
GeneRIF:12960071
GeneRIF:12877256
GeneRIF:12479028
GeneRIF:15019807
Inability to reproduce after a specified period of unprotected intercourse. Reproductive sterility is permanent infertility.
GeneRIF:11868623
GeneRIF:12811541
GeneRIF:11352070
GeneRIF:14511213
GeneRIF:16295654
GeneRIF:15820792
GeneRIF:12042278
GeneRIF:15890676
GeneRIF:15749517
GeneRIF:15811073
GeneRIF:12591952
GeneRIF:15546993
GeneRIF:15070965
Reproductive Sterility
GeneRIF:12297552
Inability to reproduce after a specified period of unprotected intercourse. Reproductive sterility is permanent infertility.[accessedResource: MSH:D007246][accessDate: 04-11-2010]
GeneRIF:15659488
MSH:D007246
Infertile (finding)[accessedResource: DOID:5223][accessDate: 04-11-2010]
GeneRIF:11870081
GeneRIF:15954500
infertility
GeneRIF:14667896
Sterility[accessedResource: MSH:D007246][accessDate: 04-11-2010]
GeneRIF:12648179
GeneRIF:12818258
GeneRIF:12801998
GeneRIF:12297480
GeneRIF:12692150
Reproductive Sterility[accessedResource: MSH:D007246][accessDate: 04-11-2010]
GeneRIF:14687743
GeneRIF:15820831
GeneRIF:15208629
GeneRIF:15229204
GeneRIF:11925379
Infertile
GeneRIF:12816981
GeneRIF:12086470
sterile
GeneRIF:12606444
GeneRIF:15474074
GeneRIF:14978268
GeneRIF:15569941
DOID:5223
GeneRIF:15139971
GeneRIF:15166129
Sterility
GeneRIF:15572448
GeneRIF:12149515
Infertile (finding)
GeneRIF:12072412
GeneRIF:16169419
GeneRIF:12773415
GeneRIF:14673081
copper(2+) sulfate
CHEBI:23414
InChIKey=ARUVKPQLZAKDPS-NJTCMIMLCU
InChI=1/Cu.H2O4S/c;1-5(2,3)4/h;(H2,1,2,3,4)/q+2;/p-2/fCu.O4S/qm;-2
copper(II) sulfate
copper sulfate
A metal sulfate compound having copper(2+) as the counterion.
Cupric sulfate
CuSO4
http://www.ebi.ac.uk/efo/EFO_0001513
cupric sulfate anhydrous
CuO4S
[Cu++].[O-]S([O-])(=O)=O
HCC4006
James Malone
Grade IV Astrocytic Tumor
NIFSTD:birnlex_12620
GeneRIF:11593297
GeneRIF:15493013
GeneRIF:14654927
Glioblastoma NOS (morphologic abnormality)
GeneRIF:15867231
Glioblastoma, NOS
GeneRIF:14676120
GLM - Glioblastoma multiforme[accessedResource: SNOMEDCT:63634009][accessDate: 04-11-2010]
Malignant Optic Nerve Astrocytoma
GeneRIF:12704666
GeneRIF:15094455
SNOMEDCT:63634009
GeneRIF:12125737
Spongioblastoma Multiforme[accessedResource: NCIt:C3058][accessDate: 04-11-2010]
GeneRIF:15986444
GeneRIF:14730346
GeneRIF:14712484
GeneRIF:15509542
GeneRIF:16078115
GeneRIF:15893739
GeneRIF:15827123
GeneRIF:16150119
Grade IV Astrocytic Neoplasm
GeneRIF:15332332
Glioblastoma (morphologic abnormality)
SNOMEDCT:269506004
GeneRIF:16171786
Grade IV Astrocytic Neoplasm[accessedResource: NCIt:C3058][accessDate: 04-11-2010]
GeneRIF:12543796
GeneRIF:16264179
GeneRIF:15364411
GeneRIF:15967113
[M]Glioblastoma NOS (morphologic abnormality)
GeneRIF:12483523
GeneRIF:11980654
GeneRIF:12507886
Glioblastoma, no ICD-O subtype
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures (MeSH).
GeneRIF:14686729
[M]Glioblastoma NOS[accessedResource: SNOMEDCT:269506004][accessDate: 04-11-2010]
GeneRIF:15967096
Glioblastomas
GeneRIF:15041700
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures.[accessedResource: MSH:D005909][accessDate: 04-11-2010]
glioblastoma multiforme
Giant Cell Glioblastomas[accessedResource: MSH:D005909][accessDate: 04-11-2010]
GeneRIF:15332324
GBM (Glioblastoma)[accessedResource: DOID:3068][accessDate: 04-11-2010]
GeneRIF:15696971
GeneRIF:14753494
[M]Glioblastoma NOS
Glioblastoma
The most malignant astrocytic tumor (WHO grade IV). It is composed of poorly differentiated neoplastic astrocytes and it is characterized by the presence of cellular polymorphism, nuclear atypia, brisk mitotic activity, vascular thrombosis, microvascular proliferation and necrosis. It typically affects adults and is preferentially located in the cerebral hemispheres. It may develop from diffuse astrocytoma WHO grade II or anaplastic astrocytoma (secondary glioblastoma), but more frequently, it manifests after a short clinical history de novo, without evidence of a less malignant precursor lesion (primary glioblastoma). Two histologic variants are recognized: giant cell glioblastoma and gliosarcoma. (WHO)[accessedResource: NCIt:C3058][accessDate: 04-11-2010]
DOID:3068
GeneRIF:15618223
glioblastoma[accessedResource: DOID:3068][accessDate: 04-11-2010]
GeneRIF:12783249
GeneRIF:12845671
GeneRIF:15119015
GBM - Glioblastoma multiforme
[M]Glioblastoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:269506004][accessDate: 04-11-2010]
GeneRIF:15928303
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures.
GeneRIF:11741977
GeneRIF:15627206
GeneRIF:15029197
Glial cell derived tumors arising from the optic nerve, usually presenting in childhood. Roughly 50% are associated with NEUROFIBROMATOSIS 1. Clinical manifestations include decreased visual acuity; EXOPHTHALMOS; NYSTAGMUS, PATHOLOGIC; STRABISMUS; pallor or swelling of the optic disc; and INTRACRANIAL HYPERTENSION. The tumor may extend into the optic chiasm and hypothalamus (MeSH).
GeneRIF:12169389
GeneRIF:12918061
GeneRIF:12084347
GeneRIF:11953893
Giant Cell Glioblastoma
GeneRIF:15153340
GLM - Glioblastoma multiforme
GeneRIF:15339919
GeneRIF:14701753
Optic Nerve Glioma[accessedResource: NIFSTD:birnlex_12621][accessDate: 04-11-2010]
GeneRIF:15719270
GeneRIF:11916499
James Malone
GBM - Glioblastoma multiforme[accessedResource: SNOMEDCT:63634009][accessDate: 04-11-2010]
GeneRIF:15561105
Grade IV Astrocytic Tumor[accessedResource: NCIt:C3058][accessDate: 04-11-2010]
GeneRIF:12407114
Glioblastoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:63634009][accessDate: 04-11-2010]
Glioblastoma NOS (morphologic abnormality)[accessedResource: DOID:3068][accessDate: 04-11-2010]
GeneRIF:12133571
GeneRIF:15908427
GeneRIF:15122332
Glioblastoma, NOS[accessedResource: SNOMEDCT:63634009][accessDate: 04-11-2010]
GeneRIF:16051185
Malignant Optic Nerve Astrocytoma[accessedResource: NIFSTD:birnlex_12621][accessDate: 04-11-2010]
GeneRIF:12517803
Glioblastomas[accessedResource: MSH:D005909][accessDate: 04-11-2010]
NIFSTD:birnlex_12621
GeneRIF:14692702
GBM (Glioblastoma)
Grade IV Astrocytoma
Optic Glioma
Astrocytomas, Grade IV[accessedResource: MSH:D005909][accessDate: 04-11-2010]
GeneRIF:16251422
Glial cell derived tumors arising from the optic nerve, usually presenting in childhood. Roughly 50% are associated with NEUROFIBROMATOSIS 1. Clinical manifestations include decreased visual acuity; EXOPHTHALMOS; NYSTAGMUS, PATHOLOGIC; STRABISMUS; pallor or swelling of the optic disc; and INTRACRANIAL HYPERTENSION. The tumor may extend into the optic chiasm and hypothalamus (MeSH).[accessedResource: NIFSTD:birnlex_12621][accessDate: 04-11-2010]
NCIt:C3058
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures (MeSH).[accessedResource: NIFSTD:birnlex_12620][accessDate: 04-11-2010]
Optic Glioma[accessedResource: NIFSTD:birnlex_12621][accessDate: 04-11-2010]
GeneRIF:16051596
Giant Cell Glioblastomas
GeneRIF:14519668
GeneRIF:11856869
Astrocytomas, Grade IV
GeneRIF:16003758
GeneRIF:15557280
GeneRIF:12082608
Tomasz Adamusiak
Spongioblastoma Multiforme
GeneRIF:11875718
MSH:D005909
GeneRIF:12850541
GeneRIF:15605984
GeneRIF:11809760
GeneRIF:12839970
GeneRIF:16215635
GeneRIF:12414663
GeneRIF:12073047
The most malignant astrocytic tumor (WHO grade IV). It is composed of poorly differentiated neoplastic astrocytes and it is characterized by the presence of cellular polymorphism, nuclear atypia, brisk mitotic activity, vascular thrombosis, microvascular proliferation and necrosis. It typically affects adults and is preferentially located in the cerebral hemispheres. It may develop from diffuse astrocytoma WHO grade II or anaplastic astrocytoma (secondary glioblastoma), but more frequently, it manifests after a short clinical history de novo, without evidence of a less malignant precursor lesion (primary glioblastoma). Two histologic variants are recognized: giant cell glioblastoma and gliosarcoma. (WHO)
GeneRIF:15198128
Giant Cell Glioblastoma[accessedResource: MSH:D005909][accessDate: 04-11-2010]
GeneRIF:14555979
GeneRIF:12445161
GeneRIF:15975137
Astrocytoma, Grade IV[accessedResource: MSH:D005909][accessDate: 04-11-2010]
Glioblastoma, no ICD-O subtype (morphologic abnormality)
Glioblastoma, no ICD-O subtype[accessedResource: SNOMEDCT:63634009][accessDate: 04-11-2010]
GeneRIF:15906353
Glioblastoma (morphologic abnormality)[accessedResource: DOID:3068][accessDate: 04-11-2010]
Optic Nerve Glioma
GeneRIF:11959893
true
An MMHCC (Mouse Models of Human Cancers Consortium) part is an organism part that has been modelled by the MMHCC, a program to develop and refine experimental models that reflect the etiology and progression of human cancer.
NCIt:C19750
obsolete_MMHCC part
MMHCC[accessedResource: NCIt:C19750][accessDate: 10-05-2010]
Mouse Models of Human Cancer Consortium[accessedResource: NCIt:C19750][accessDate: 10-05-2010]
A program to develop and refine experimental models that reflect the etiology and progression of human cancer.[accessedResource: NCIt:C19750][accessDate: 10-05-2010]
Obsolete: No longer required in EFO
Mouse Models of Human Cancer Consortium
James Malone
A program to develop and refine experimental models that reflect the etiology and progression of human cancer.
MMHCC
carbamohydroxamic acid
carbamoyl oxime
NC(=O)NO
carbamyl hydroxamate
CHEBI:44423
InChIKey=VSNHCAURESNICA-DTXNPOPMCG
N-hydroxyurea
carbamohydroximic acid
Hydroxyharnstoff
InChI=1/CH4N2O2/c2-1(4)3-5/h5H,(H3,2,3,4)/f/h3H,2H2
hydroxycarbamide
http://www.ebi.ac.uk/efo/EFO_0001554
oxyurea
CH4N2O2
N-carbamoylhydroxylamine
An urea that has formula CH4N2O2.
Hydroxycarbamid
hydrea
hydroxyurea
GeneRIF:15856430
GeneRIF:11859072
GeneRIF:12552965
GeneRIF:12784332
GeneRIF:14584041
GeneRIF:12538354
GeneRIF:15550849
A carcinoma that derives_from breast tissue.
GeneRIF:12015771
GeneRIF:12522268
GeneRIF:15693887
GeneRIF:12105188
GeneRIF:10713110
Carcinoma of the Breast[accessedResource: NCIt:C4872][accessDate: 04-11-2010]
Carcinoma of breast NOS (disorder)
A carcinoma that originates from breast tissue.
GeneRIF:11992405
DOID:3459
GeneRIF:11802810
Carcinoma of breast NOS
carcinoma OF breast
GeneRIF:16007173
GeneRIF:15592496
GeneRIF:11839578
Cancer of Breast[accessedResource: NCIt:C4872][accessDate: 04-11-2010]
GeneRIF:15856473
GeneRIF:12592371
GeneRIF:14966279
GeneRIF:15059886
GeneRIF:16273187
GeneRIF:12174926
CA - Carcinoma of breast[accessedResource: SNOMEDCT:254838004][accessDate: 04-11-2010]
GeneRIF:11909957
SNOMEDCT:254838004
GeneRIF:11986781
Carcinoma of Breast[accessedResource: NCIt:C4872][accessDate: 04-11-2010]
GeneRIF:15374639
GeneRIF:15999367
GeneRIF:15944917
A carcinoma arising from the breast, most commonly the terminal ductal-lobular unit. It is the most common malignant tumor in females. Risk factors include country of birth, family history, menstrual and reproductive history, fibrocystic disease and epithelial hyperplasia, exogenous estrogens, contraceptive agents, and ionizing radiation. The vast majority of breast carcinomas are adenocarcinomas (ductal or lobular). Breast carcinoma spreads by direct invasion, by the lymphatic route, and by the blood vessel route. The most common site of lymph node involvement is the axilla.[accessedResource: NCIt:C4872][accessDate: 04-11-2010]
GeneRIF:12637343
GeneRIF:15067342
GeneRIF:12566312
GeneRIF:15034868
GeneRIF:11724803
GeneRIF:15743035
GeneRIF:15034014
GeneRIF:15578430
Carcinoma of breast NOS[accessedResource: SNOMEDCT:286898006][accessDate: 04-11-2010]
GeneRIF:14729059
GeneRIF:11994274
breast carcinoma
GeneRIF:15156151
carcinoma of breast (disorder)[accessedResource: DOID:3459][accessDate: 04-11-2010]
GeneRIF:15882617
GeneRIF:12034875
GeneRIF:15073116
GeneRIF:16295419
GeneRIF:15867228
GeneRIF:15168344
GeneRIF:16049961
GeneRIF:16024059
GeneRIF:15920544
GeneRIF:14654792
GeneRIF:14519635
A carcinoma arising from the breast, most commonly the terminal ductal-lobular unit. It is the most common malignant tumor in females. Risk factors include country of birth, family history, menstrual and reproductive history, fibrocystic disease and epithelial hyperplasia, exogenous estrogens, contraceptive agents, and ionizing radiation. The vast majority of breast carcinomas are adenocarcinomas (ductal or lobular). Breast carcinoma spreads by direct invasion, by the lymphatic route, and by the blood vessel route. The most common site of lymph node involvement is the axilla.
A carcinoma that derives_from breast tissue.[accessedResource: DOID:3459][accessDate: 04-11-2010]
GeneRIF:15837735
GeneRIF:11962738
GeneRIF:15742334
GeneRIF:16000313
GeneRIF:15059510
GeneRIF:12490973
GeneRIF:14638862
NCIt:C4872
GeneRIF:16054892
GeneRIF:14666627
GeneRIF:12231533
Cancer of Breast
GeneRIF:14871985
GeneRIF:12581744
GeneRIF:12653579
Cancer of the Breast
GeneRIF:15149158
GeneRIF:15241822
GeneRIF:14612940
GeneRIF:15102684
Cancer of the Breast[accessedResource: NCIt:C4872][accessDate: 04-11-2010]
GeneRIF:14692019
GeneRIF:15863392
GeneRIF:14687724
GeneRIF:15353581
GeneRIF:12650602
GeneRIF:11891846
GeneRIF:15102687
Mammary Carcinoma[accessedResource: NCIt:C4872][accessDate: 04-11-2010]
carcinoma of breast (disorder)
GeneRIF:15451571
GeneRIF:12037665
James Malone
GeneRIF:11759817
GeneRIF:15492258
GeneRIF:15193258
GeneRIF:12499259
BREAST CANCER[accessedResource: NCIt:C4872][accessDate: 04-11-2010]
GeneRIF:12648519
GeneRIF:12879463
GeneRIF:12529969
GeneRIF:11822878
SNOMEDCT:286898006
GeneRIF:14500350
GeneRIF:12496062
GeneRIF:16027728
CANCER, BREAST
GeneRIF:15935701
GeneRIF:12878859
GeneRIF:12115372
GeneRIF:12462387
GeneRIF:12640109
GeneRIF:15671541
GeneRIF:12133473
CA - Carcinoma of breast
GeneRIF:16144914
GeneRIF:12197229
GeneRIF:12452027
GeneRIF:14991534
Carcinoma of the Breast
GeneRIF:11948115
Carcinoma of breast NOS (disorder)[accessedResource: SNOMEDCT:286898006][accessDate: 04-11-2010]
GeneRIF:15241820
Mammary carcinoma
true
UO:0000007
http://www.ebi.ac.uk/efo/EFO_0001684
A luminous intensity unit is a base unit which is a standard measure of the wavelength-weighted power emitted by a light source in a particular direction.
A base unit which is a standard measure of the wavelength-weighted power emitted by a light source in a particular direction.
luminous intensity unit
James Malone
MAT:0000156
BTO:0000447
Any of the light horny epidermal outgrowths that form the external covering of the body of birds and that consist of a shaft bearing on each side a series of barbs which bear barbules which in turn bear barbicels commonly ending in hooked hamuli and interlocking with the barbules of an adjacent barb to link the barbs into a continuous vane.
Any of the light horny epidermal outgrowths that form the external covering of the body of birds and that consist of a shaft bearing on each side a series of barbs which bear barbules which in turn bear barbicels commonly ending in hooked hamuli and interlocking with the barbules of an adjacent barb to link the barbs into a continuous vane.[accessedResource: BTO:0000447][accessDate: 04-11-2010]
feather
James Malone
Helen Parkinson
MO_10
Helen Parkinson
Tomasz Adamusiak
Tomasz Adamusiak
Concept naming convention is lower case natural naming with spaces, when necessary captials should be used, for example disease factor, HIV, breast carcinoma, Ewing's sarcoma
Jie Zheng
An experimental factor in Array Express.
James Malone
An experimental factor in Array Express which are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner.
James Malone
true
experimental factor
2.5
true
obsolete_liver carcinoma
James Malone
duplicate of EFO_0000182
James Malone
plant ovary
MAT:0000517
PO:0009072
The enlarged rounded usually basal portion of the pistil or gynoecium of an angiospermous plant that bears the ovules and consists of one or more carpels
BTO:0000750
The enlarged rounded usually basal portion of the pistil or gynoecium of an angiospermous plant that bears the ovules and consists of one or more carpels[accessedResource: BTO:0000750][accessDate: 04-11-2010]
true
obsolete_Beas2B
James Malone
Duplication, use EFO_0001089 instead
birn_anat:birnlex_1197
MA:0000950
hippocampus CA1
Tomasz Adamusiak
1.9
true
obsolete_lymphoblastic leukemia MOLT-4
James Malone
duplicate of EFO_0001220
drug role
James Malone
carcinoma in situ of breast
DOID:8791
ductal carcinoma in situ
James Malone
exocrine cancer[accessedResource: DOID:4905][accessDate: 04-11-2010]
DOID:4905
Carcinoma of pancreas (disorder)
carcinoma of pancreas
pancreatic carcinoma
Ele Holloway
A carcinoma that is manifested in cells found in the tissues of the pancreas.
Exocrine pancreas carcinoma
A carcinoma that is located_in cells found in the tissues of the pancreas.
Exocrine pancreas carcinoma[accessedResource: DOID:4905][accessDate: 04-11-2010]
Tomasz Adamusiak
A carcinoma that is located_in cells found in the tissues of the pancreas.[accessedResource: DOID:4905][accessDate: 04-11-2010]
carcinoma of pancreas (disorder)[accessedResource: DOID:4905][accessDate: 04-11-2010]
carcinoma of pancreas[accessedResource: DOID:4905][accessDate: 04-11-2010]
exocrine cancer
NCI-H2030
James Malone
Ele Holloway
MO_674
A treatment applied to a sample where some behaviour is expected as a result e.g. avoidance
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#behavioral_stimulus
Jie Zheng
avoidance
James Malone
behavioural stimulus
Tomasz Adamusiak
behavioral stimulus
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#behavioral_stimulus[accessedResource: MO_674][accessDate: 04-11-2010]
FBbt:00005487
anterior spiracle specific anlage
James Malone
NIFSTD:birnlex_734
A basal part of the diencephalon that lies beneath the thalamus on each side, forms the floor of the third ventricle, and includes vital autonomic regulatory centers.nThe ventral part of the diencephalon that forms the floor and part of the lateral wall of the third ventricle. Anatomically, it includes the preoptic area, optic tract, optic chiasm, mammillary bodies, tuber cinereum, infundibulum, and neurohypophysis, but for physiological purposes the neurohypophysis is considered a distinct structure. The hypothalamus may be divided into five regions or areas (area hypothalamica rostralis, area hypothalamica dorsalis, area hypothalamica intermedia, area hypothalamica lateralis and area hypothalamica posterior) or into three longitudinal zones (periventricular zone, medial zone, and lateral zone). The hypothalamic nuclei constitute that part of the corticodiencephalic mechanism that activates, controls and integrates the peripheral autonomic mechanisms, endocrine activity, and many somatic functions, e.g., a general regulation of water balance, body temperature, sleep, and food intake, and the development of secondary sex characteristics. The hypothalamus secretes vasopressin and oxytocin, which are stored in the pituitary, as well as many releasing factors (hypophysiotropic hormones), by means of which it exerts control over functions of the adenohypophysis.
Multi-tissue structure which is the largest portion of diencephalon and is ventrally located. The hypothalamus arises near the end of the segmentation period and the embryonic hypothalamic region gives rise to the neurohypophysis and other diencephalic nuclei.
MAT:0000112
CNS - Brain - Hypothalamus (MMHCC)
hypothalamus
ZFA:0000032
James Malone
BTO:0000614
A specialized brain region of the ventral diencephalon arising near the end of the segmentation period; the embryonic hypothalamic region will give rise to the posterior pituitary gland as well as a number of brain nuclei. Kimmel et al, 1995.[accessedResource: TAO:0000032][accessDate: 04-11-2010]
CNS - Brain - Hypothalamus (MMHCC)[accessedResource: NCIt:C22616][accessDate: 04-11-2010]
Preoptico-hypothalamic region[accessedResource: FMAID:62008][accessDate: 04-11-2010]
EV:0100225
A basal part of the diencephalon that lies beneath the thalamus on each side, forms the floor of the third ventricle, and includes vital autonomic regulatory centers.nThe ventral part of the diencephalon that forms the floor and part of the lateral wall of the third ventricle. Anatomically, it includes the preoptic area, optic tract, optic chiasm, mammillary bodies, tuber cinereum, infundibulum, and neurohypophysis, but for physiological purposes the neurohypophysis is considered a distinct structure. The hypothalamus may be divided into five regions or areas (area hypothalamica rostralis, area hypothalamica dorsalis, area hypothalamica intermedia, area hypothalamica lateralis and area hypothalamica posterior) or into three longitudinal zones (periventricular zone, medial zone, and lateral zone). The hypothalamic nuclei constitute that part of the corticodiencephalic mechanism that activates, controls and integrates the peripheral autonomic mechanisms, endocrine activity, and many somatic functions, e.g., a general regulation of water balance, body temperature, sleep, and food intake, and the development of secondary sex characteristics. The hypothalamus secretes vasopressin and oxytocin, which are stored in the pituitary, as well as many releasing factors (hypophysiotropic hormones), by means of which it exerts control over functions of the adenohypophysis.[accessedResource: BTO:0000614][accessDate: 04-11-2010]
SAEL:52
EMAPA:17536
Preoptico-hypothalamic area[accessedResource: FMAID:62008][accessDate: 04-11-2010]
TAO:0000032
Multi-tissue structure which is the largest portion of diencephalon and is ventrally located. The hypothalamus arises near the end of the segmentation period and the embryonic hypothalamic region gives rise to the neurohypophysis and other diencephalic nuclei.[accessedResource: ZFA:0000032][accessDate: 04-11-2010]
A specialized brain region of the ventral diencephalon arising near the end of the segmentation period; the embryonic hypothalamic region will give rise to the posterior pituitary gland as well as a number of brain nuclei. Kimmel et al, 1995.
NCIt:C22616
FMAID:62008
MA:0000173
EHDAA:5446
Preoptico-hypothalamic region
Preoptico-hypothalamic area
Tomasz Adamusiak
ZFS:0000010
blastula 512-cell
James Malone
MO_866
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#sampling_time_point
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#sampling_time_point[accessedResource: MO_866][accessDate: 04-11-2010]
sampling time
Tomasz Adamusiak
Jie Zheng
James Malone
http://jaxmice.jax.org/strain/009260.html
ILSXISS13/TejJ
Tomasz Adamusiak
Brown Adipose Tissue
bulbus arteriosus
obsolete_adipose tissue brown MMHCC
Brown Adipose Tissue[accessedResource: NCIt:C22704][accessDate: 10-05-2010]
true
Adipose Tissue - Brown (MMHCC)
Adipose Tissue - Brown (MMHCC)[accessedResource: NCIt:C22704][accessDate: 10-05-2010]
Use brown fat EFO_0000812 instead
Brown Fat[accessedResource: NCIt:C22704][accessDate: 10-05-2010]
Brown Fat
NCIt:C22704
http://jaxmice.jax.org/strain/009317.html
ILSXISS84/TejJ
Tomasz Adamusiak
DOID:10762
GeneRIF:15754412
PHT - Portal hypertension
Liver cirrhosis with intrahepatic portal obstruction, HYPERTENSION, and patent UMBILICAL VEINS.[accessedResource: MSH:D006975][accessDate: 04-11-2010]
Cruveilhier-Baumgarten Syndrome[accessedResource: MSH:D006975][accessDate: 04-11-2010]
GeneRIF:12730888
GeneRIF:15513950
Portal hypertension (disorder)[accessedResource: DOID:10762][accessDate: 04-11-2010]
SNOMEDCT:34742003
MSH:D006975
GeneRIF:12713865
GeneRIF:15222038
GeneRIF:14699044
GeneRIF:14525948
Hypertensions, Portal
Portal hypertension (disorder)
ICD9:572.3
Abnormal increase of resistance to blood flow within the hepatic PORTAL SYSTEM, frequently seen in LIVER CIRRHOSIS and conditions with obstruction of the PORTAL VEIN.
Liver cirrhosis with intrahepatic portal obstruction, HYPERTENSION, and patent UMBILICAL VEINS.
Portal Hypertensions[accessedResource: MSH:D006975][accessDate: 04-11-2010]
Abnormal increase of resistance to blood flow within the hepatic PORTAL SYSTEM, frequently seen in LIVER CIRRHOSIS and conditions with obstruction of the PORTAL VEIN.[accessedResource: MSH:D006975][accessDate: 04-11-2010]
James Malone
GeneRIF:14572769
Cruveilhier Baumgarten Syndrome
GeneRIF:15513955
GeneRIF:15849554
GeneRIF:15287858
PHT - Portal hypertension[accessedResource: SNOMEDCT:34742003][accessDate: 04-11-2010]
portal hypertension
GeneRIF:14990148
M0 Acute Granulocytic Leukemia with Minimal Differentiation[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
M0 Acute Myelogenous Leukemia
M0 Acute Granulocytic Leukemia[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
Acute Myeloblastic Leukemia with Minimal Differentiation
M0 Acute Myelogenous Leukemia[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
M0 Acute Myelocytic Leukemia
M0 Acute Myeloblastic Leukemia
An acute myeloid leukemia (AML) in which the blasts do not show evidence of myeloid differentiation by morphology and conventional cytochemistry. The myeloid origin of the blasts is demonstrated by immunohistochemistry and/or electron microscopic studies. The patients present with anemia, neutropenia, and thrombocytopenia. The prognosis is usually poor. (WHO, 2001)
M0 Acute Myelogenous Leukemia with Minimal Differentiation[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
M0 Myeloid Leukemia with Minimal Differentiation
Acute Myelocytic Leukemia with Minimal Differentiation
AML with Minimal Differentiation
M0 Acute Granulocytic Leukemia with Minimal Differentiation
minimally differentiated AML
M0 Acute Granulocytic Leukemia
M0 Myeloid Leukemia
Acute Myeloid Leukemia, Minimally Differentiated[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
NCIt:C8460
M0 Acute Myelogenous Leukemia with Minimal Differentiation
M0 Myeloid Leukemia with Minimal Differentiation[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
Acute Myeloid Leukemia with Minimal Differentiation[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
An acute myeloid leukemia (AML) in which the blasts do not show evidence of myeloid differentiation by morphology and conventional cytochemistry. The myeloid origin of the blasts is demonstrated by immunohistochemistry and/or electron microscopic studies. The patients present with anemia, neutropenia, and thrombocytopenia. The prognosis is usually poor. (WHO, 2001)[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
Acute Myeloid Leukemia with Minimal Differentiation (MO)
M0 Acute Myelocytic Leukemia[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
minimally differentiated acute myeloblastic leukemia
M0 Acute Myeloblastic Leukemia[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
AML with Minimal Differentiation[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
Acute Myeloblastic Leukemia with Minimal Differentiation[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
M0 Myeloid Leukemia[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
Acute Myelocytic Leukemia with Minimal Differentiation[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
Acute Myeloid Leukemia with Minimal Differentiation
Acute Myeloid Leukemia with Minimal Differentiation (MO)[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
Acute Myelogenous Leukemia with Minimal Differentiation[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
Tomasz Adamusiak
Acute Myelogenous Leukemia with Minimal Differentiation
Acute Myeloid Leukemia, Minimally Differentiated
NIFSTD:birnlex_1710
EHDAA:5433
FMAID:62009
epithalamus
Tomasz Adamusiak
Brain structure which is part of the diencephalon and consists of the dorsal and ventral nuclei of the habenula, and two dorsal outgrowths, the epiphysis and the saccus dorsalis. From Neuroanatomy of the Zebrafish Brain.
MFO:0079980
ZFA:0000509
The caudal part of the roof and the adjoining lateral walls of the third ventricle of the diencephalon, comprising the habenular nuclei and their commissure, pineal body, and commissure of the epithalamus.
TAO:0000509
MA:0000172
BTO:0000175
James Malone
Brain structure which is part of the diencephalon and consists of the dorsal and ventral nuclei of the habenula, and two dorsal outgrowths, the epiphysis and the saccus dorsalis. From Neuroanatomy of the Zebrafish Brain.[accessedResource: ZFA:0000509][accessDate: 04-11-2010]
EMAPA:17532
The caudal part of the roof and the adjoining lateral walls of the third ventricle of the diencephalon, comprising the habenular nuclei and their commissure, pineal body, and commissure of the epithalamus.[accessedResource: BTO:0000175][accessDate: 04-11-2010]
MAT:0000422
adrenocortical carcinoma
Adrenal cortical carcinoma (morphologic abnormality)
carcinoma of the Adrenal cortex[accessedResource: DOID:3948][accessDate: 04-11-2010]
Adrenal cortical carcinoma (morphologic abnormality)[accessedResource: DOID:3948][accessDate: 04-11-2010]
carcinoma of the Adrenal cortex
DOID:3948
An adrenal carcinoma that forms in the outer layer of tissue of the adrenal gland.
An adrenal carcinoma that forms in the outer layer of tissue of the adrenal gland.[accessedResource: DOID:3948][accessDate: 04-11-2010]
Tomasz Adamusiak
GeneRIF:12827055
ICD9:372.40
Unspecified pterygium (disorder)[accessedResource: SNOMEDCT:193879003][accessDate: 04-11-2010]
Web eye[accessedResource: DOID:10526][accessDate: 04-11-2010]
conjunctival pterygium[accessedResource: DOID:10526][accessDate: 04-11-2010]
SNOMEDCT:193884009
ICD9:372.4
pterygium
MSH:D011625
GeneRIF:14533030
SNOMEDCT:193879003
GeneRIF:15523624
Pterygium, unspecified
GeneRIF:15273656
Pterygium (disorder)
Pterygium (disorder)[accessedResource: SNOMEDCT:77489003][accessDate: 04-11-2010]
Unspecified pterygium[accessedResource: SNOMEDCT:193879003][accessDate: 04-11-2010]
Web eye
Unspecified pterygium (disorder)
Pterygium, NOS
Pterygium NOS[accessedResource: SNOMEDCT:193884009][accessDate: 04-11-2010]
DOID:10526
Pterygiums[accessedResource: MSH:D011625][accessDate: 04-11-2010]
Pterygiums
An abnormal triangular fold of membrane in the interpalpebral fissure, extending from the conjunctiva to the cornea, being immovably united to the cornea at its apex, firmly attached to the sclera throughout its middle portion, and merged with the conjunctiva at its base. (Dorland, 27th ed)[accessedResource: MSH:D011625][accessDate: 04-11-2010]
Pterygium NOS (disorder)
Conjunctival Pterygium
SNOMEDCT:77489003
An abnormal triangular fold of membrane in the interpalpebral fissure, extending from the conjunctiva to the cornea, being immovably united to the cornea at its apex, firmly attached to the sclera throughout its middle portion, and merged with the conjunctiva at its base. (Dorland, 27th ed)
Pterygium NOS (disorder)[accessedResource: SNOMEDCT:193884009][accessDate: 04-11-2010]
James Malone
Helen Parkinson
renal system disease
nephropathy
A disease affecting the kidneys
kidney disease
reference sample
The act of directing or determining; regulation or maintenance of a function or action; a relation of constraint of one entity (thing or person or group) by another.
James Malone
Controlling[accessedResource: NCIt:C61299][accessDate: 04-11-2010]
The act of directing or determining; regulation or maintenance of a function or action; a relation of constraint of one entity (thing or person or group) by another.[accessedResource: NCIt:C61299][accessDate: 04-11-2010]
A control role is borne by a material in a process in which results obtained from an experimental sample and a control sample are compared.
Controlling
NCIt:C61299
control
Controlled[accessedResource: NCIt:C61299][accessDate: 04-11-2010]
Controlled
MA:00001540
appendix
MAT:0000287
FMAID:14542
EV:0100080
A narrow blind tube usually about three or four inches (7.6 to 10.2 centimeters) long that extends from the cecum in the lower right-hand part of the abdomen, has much lymphoid wall tissue, normally communicates with the cavity of the cecum, and represents an atrophied terminal part of the cecum.[accessedResource: BTO:0000084][accessDate: 04-11-2010]
James Malone
SAEL:7
BTO:0000084
A narrow blind tube usually about three or four inches (7.6 to 10.2 centimeters) long that extends from the cecum in the lower right-hand part of the abdomen, has much lymphoid wall tissue, normally communicates with the cavity of the cecum, and represents an atrophied terminal part of the cecum.
vermiform appendix
Organ with organ cavity which is continuous proximally with the cecum and distally terminates in the tip of the appendix. Examples: There is only one appendix.
vermiform appendix[accessedResource: BTO:0000084][accessDate: 04-11-2010]
http://jaxmice.jax.org/strain/009295.html
ILSXISS123/TejJ
Tomasz Adamusiak
GeneRIF:15351976
Leukemia, no ICD-O subtype
GeneRIF:14996839
GeneRIF:11929767
GeneRIF:12096925
GeneRIF:15541480
GeneRIF:16179912
GeneRIF:15068389
Other leukemia of unspecified cell type[accessedResource: ICD9:208.8][accessDate: 04-11-2010]
Other specified leukemia[accessedResource: SNOMEDCT:188751002][accessDate: 04-11-2010]
A cancer that affects the blood or bone marrow characterized by an abnormal proliferation of blood cells.
[M]leukemia NOS (morphologic abnormality)
GeneRIF:14519654
GeneRIF:14607752
Leukemia, NOS[accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
GeneRIF:14512321
GeneRIF:12239155
GeneRIF:12127563
GeneRIF:15475071
Other specified leukemia without mention of remission[accessedResource: ICD9:207.80][accessDate: 04-11-2010]
ICD9:207
GeneRIF:12203795
Leukaemia, no ICD-O subtype
GeneRIF:15388576
GeneRIF:15959530
[X]Other specified leukemias (disorder)[accessedResource: SNOMEDCT:190161003][accessDate: 04-11-2010]
GeneRIF:16088313
GeneRIF:12773566
Other leukemia of unspecified cell type in remission[accessedResource: ICD9:208.81][accessDate: 04-11-2010]
GeneRIF:14630792
Leukemia, disease (disorder)
Leukemias[accessedResource: NCIt:C3161][accessDate: 04-11-2010]
Other leukemia of unspecified cell type (disorder)
leukemia
Leukemia NOS (disorder)
Other specified leukemia
Leukemia NOS (disorder)[accessedResource: SNOMEDCT:188767008][accessDate: 04-11-2010]
GeneRIF:11986947
GeneRIF:15860672
Other leukemia of unspecified cell type (disorder)[accessedResource: SNOMEDCT:188766004][accessDate: 04-11-2010]
GeneRIF:14726393
GeneRIF:15304397
Aleukemic leukemia [obs]
Leukemia of unspecified cell type[accessedResource: ICD9:208][accessDate: 04-11-2010]
GeneRIF:12186695
SNOMEDCT:188767008
GeneRIF:14662771
[M]Leukemia unspecified, NOS[accessedResource: SNOMEDCT:190029004][accessDate: 04-11-2010]
Other leukemia of unspecified cell type without mention of remission[accessedResource: ICD9:208.80][accessDate: 04-11-2010]
[M]Leukemias unspecified
GeneRIF:12538698
chronic leukemia
GeneRIF:15512811
GeneRIF:14671643
[M]Leukemia NOS
GeneRIF:12705477
GeneRIF:15833859
Leukemia, NOS
GeneRIF:12183458
Unspecified leukemia without mention of remission[accessedResource: ICD9:208.90][accessDate: 04-11-2010]
GeneRIF:15516987
GeneRIF:14521941
GeneRIF:16130282
GeneRIF:15705792
GeneRIF:15687235
[M]Leukaemia NOS[accessedResource: SNOMEDCT:190025005][accessDate: 04-11-2010]
OTH SPF LEUK W/O REMSION[accessedResource: ICD9:207.80][accessDate: 04-11-2010]
GeneRIF:12515866
Leukaemia, NOS, without mention of remission
GeneRIF:12393632
GeneRIF:15144712
GeneRIF:15567461
GeneRIF:12700665
ICD9:208.9
SNOMEDCT:87163000
LEUKEMIA NOS W/O REMSION
[X]Other leukemia of unspecified cell type (disorder)[accessedResource: SNOMEDCT:190162005][accessDate: 04-11-2010]
Leukaemia morphology
chronic leukemia NOS (disorder)[accessedResource: DOID:1240][accessDate: 04-11-2010]
Other specified leukemia NOS[accessedResource: SNOMEDCT:188761009][accessDate: 04-11-2010]
GeneRIF:14691303
Blood (Leukemia)[accessedResource: NCIt:C3161][accessDate: 04-11-2010]
Other specified leukaemia NOS
GeneRIF:15604256
GeneRIF:12592353
GeneRIF:12225794
Aleukemic leukemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
GeneRIF:15298716
[X]Other specified leukaemias
Other leukemia of unspecified cell type
OTH LEUK UNS CL W/O RMSN
Leukemia of unspecified cell type (disorder)[accessedResource: SNOMEDCT:188762002][accessDate: 04-11-2010]
[M]leukemias unspecified (morphologic abnormality)
[M]Leukaemia unspecified, NOS
GeneRIF:14988155
GeneRIF:16109713
GeneRIF:14990976
GeneRIF:14689061
GeneRIF:15199122
Unspecified leukemia[accessedResource: ICD9:208.9][accessDate: 04-11-2010]
GeneRIF:16271957
[M]Leukaemia unspecified, NOS[accessedResource: SNOMEDCT:190029004][accessDate: 04-11-2010]
GeneRIF:15183893
SNOMEDCT:93143009
GeneRIF:15475073
chronic leukaemia NOS
GeneRIF:16005964
Other specified leukemia NOS
GeneRIF:12393620
GeneRIF:15193261
ICD9:207.8
Leukaemia of unspecified cell type[accessedResource: SNOMEDCT:188762002][accessDate: 04-11-2010]
chronic leukemia - category (morphologic abnormality)
GeneRIF:12688322
GeneRIF:15735695
GeneRIF:14611815
chronic leukemia, disease (disorder)[accessedResource: DOID:1240][accessDate: 04-11-2010]
[M]Leukemia unspecified, NOS
GeneRIF:15454492
GeneRIF:15895983
Chronic leukaemia [obs]
Other leukaemia of unspecified cell type
[X]Other leukemia of unspecified cell type[accessedResource: SNOMEDCT:190162005][accessDate: 04-11-2010]
Other specified leukaemia
GeneRIF:16002684
GeneRIF:11986949
GeneRIF:16210627
OTH SPF LEUK W REMSION[accessedResource: ICD9:207.81][accessDate: 04-11-2010]
GeneRIF:15611294
GeneRIF:15583855
Leukemia, NOS, without mention of remission[accessedResource: SNOMEDCT:93143009][accessDate: 04-11-2010]
GeneRIF:12482966
[M]leukemia unspecified, NOS (morphologic abnormality)
GeneRIF:12665591
GeneRIF:12700639
GeneRIF:15674415
GeneRIF:12438221
chronic leukemia of unspecified cell type[accessedResource: DOID:1240][accessDate: 04-11-2010]
Leukaemia, NOS, without mention of remission[accessedResource: SNOMEDCT:93143009][accessDate: 04-11-2010]
Other specified leukemia NOS (disorder)
Leukemia, disease (disorder)[accessedResource: SNOMEDCT:93143009][accessDate: 04-11-2010]
Other specified leukemia NOS (disorder)[accessedResource: SNOMEDCT:188761009][accessDate: 04-11-2010]
GeneRIF:11937542
Other leukaemia of unspecified cell type[accessedResource: SNOMEDCT:188766004][accessDate: 04-11-2010]
Leukemia of unspecified cell type (disorder)
GeneRIF:12411326
Unspecified leukemia without mention of remission
GeneRIF:15723065
Blood (Leukemia)
Leukemia morphology[accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
[X]Other leukaemia of unspecified cell type
[X]Other leukemia of unspecified cell type (disorder)
Other leukemia of unspecified cell type without mention of remission
GeneRIF:11999556
GeneRIF:12145702
GeneRIF:12002276
GeneRIF:12901974
Subacute leukemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
Leukemias, General
Subacute leukemia [obs]
Leukaemia morphology[accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
GeneRIF:12648450
GeneRIF:15585652
ICD9:207.81
GeneRIF:16081688
Leukemia, NOS, without mention of remission
GeneRIF:15004329
GeneRIF:15645140
[M]leukemias unspecified (morphologic abnormality)[accessedResource: SNOMEDCT:190024009][accessDate: 04-11-2010]
GeneRIF:15723338
GeneRIF:11920534
OTH LEUK UNS CL W/O RMSN[accessedResource: ICD9:208.80][accessDate: 04-11-2010]
SNOMEDCT:188751002
GeneRIF:12511424
[M]Leukaemias unspecified[accessedResource: SNOMEDCT:190024009][accessDate: 04-11-2010]
OTH SPF LEUK W/O REMSION
SNOMEDCT:190024009
chronic leukemia NOS
GeneRIF:12506112
Chronic leukemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
NCIt:C3161
GeneRIF:11855785
GeneRIF:15856017
GeneRIF:14737102
GeneRIF:11856346
[M]leukemia NOS (morphologic abnormality)[accessedResource: SNOMEDCT:190025005][accessDate: 04-11-2010]
[X]Other specified leukemias[accessedResource: SNOMEDCT:190161003][accessDate: 04-11-2010]
GeneRIF:15187020
ICD9:207.80
GeneRIF:16139274
GeneRIF:12139489
GeneRIF:15845894
Chronic leukaemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
Leukemia, morphology (morphologic abnormality)
[M]Leukaemia NOS
GeneRIF:12586625
GeneRIF:12613527
A malignant (clonal) hematologic disorder, involving hematopoietic stem cells and characterized by the presence of primitive or atypical myeloid or lymphoid cells in the bone marrow and the blood. Leukemias are classified as acute or chronic based on the degree of cellular differentiation and the predominant cell type present. Leukemia is usually associated with anemia, fever, hemorrhagic episodes, and splenomegaly. Common leukemias include acute myeloid leukemia, chronic myelogenous leukemia, acute lymphoblastic or precursor lymphoblastic leukemia, and chronic lymphocytic leukemia. Treatment is vital to patient survival; untreated, the natural course of acute leukemias is normally measured in weeks or months, while that of chronic leukemias is more often measured in months or years.
SNOMEDCT:188761009
GeneRIF:14578205
GeneRIF:12096343
GeneRIF:12553058
GeneRIF:12496475
Leukaemia
ICD9:208.90
Leukaemia, disease
chronic leukemia[accessedResource: DOID:1240][accessDate: 04-11-2010]
GeneRIF:12008082
GeneRIF:12646947
Subacute leukaemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
GeneRIF:15325703
Leukemias, General[accessedResource: NCIt:C3161][accessDate: 04-11-2010]
Leukemia, disease
chronic leukemia of unspecified cell type
GeneRIF:11999550
GeneRIF:15223639
James Malone
Leukemias
[X]Other specified leukemias (disorder)
GeneRIF:14615372
[X]Other specified leukemias
GeneRIF:12239152
GeneRIF:11830488
Other specified leukaemia[accessedResource: SNOMEDCT:188751002][accessDate: 04-11-2010]
chronic leukemia - category (morphologic abnormality)[accessedResource: DOID:1240][accessDate: 04-11-2010]
Other leukemia of unspecified cell type in remission
Unspecified leukemia
GeneRIF:11764099
Aleukaemic leukaemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
[M]Leukaemias unspecified
OTH LEUK UNS CL W RMSON
Aleukaemic leukaemia [obs]
GeneRIF:12138900
GeneRIF:15723339
GeneRIF:12799277
SNOMEDCT:188766004
[M]Leukemias unspecified[accessedResource: SNOMEDCT:190024009][accessDate: 04-11-2010]
GeneRIF:15964800
SNOMEDCT:190161003
GeneRIF:12145704
Leukaemia NOS[accessedResource: SNOMEDCT:188767008][accessDate: 04-11-2010]
GeneRIF:12722639
Leukemia, disease[accessedResource: SNOMEDCT:93143009][accessDate: 04-11-2010]
Leukemia, no ICD-O subtype[accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
SNOMEDCT:190029004
Leukaemia, disease[accessedResource: SNOMEDCT:93143009][accessDate: 04-11-2010]
GeneRIF:15744340
Other specified leukemia without mention of remission
GeneRIF:15545599
GeneRIF:15298960
[M]leukemia unspecified, NOS (morphologic abnormality)[accessedResource: SNOMEDCT:190029004][accessDate: 04-11-2010]
Other specified leukaemia NOS[accessedResource: SNOMEDCT:188761009][accessDate: 04-11-2010]
A cancer that affects the blood or bone marrow characterized by an abnormal proliferation of blood cells.[accessedResource: DOID:1240][accessDate: 04-11-2010]
Leukaemia, no ICD-O subtype[accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
GeneRIF:12682649
chronic leukemia NOS (disorder)
GeneRIF:15070702
Leukemia, no ICD-O subtype (morphologic abnormality)
[X]Other leukemia of unspecified cell type
This is potentially too broad as well as overlaps with lymphoma and should be obsoleted.
GeneRIF:12663445
GeneRIF:14757439
GeneRIF:12208881
Leukemia, morphology (morphologic abnormality)[accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
GeneRIF:10437917
GeneRIF:11893077
DOID:1240
Leukaemia NOS
Leukaemia of unspecified cell type
[M]Leukemia NOS[accessedResource: SNOMEDCT:190025005][accessDate: 04-11-2010]
SNOMEDCT:190025005
ICD9:208.8
ICD9:208.80
GeneRIF:12533044
Other specified leukemia in remission
GeneRIF:11979742
GeneRIF:11823049
Subacute leukaemia [obs]
GeneRIF:15856008
Other specified leukemia in remission[accessedResource: ICD9:207.81][accessDate: 04-11-2010]
Other specified leukemia (disorder)[accessedResource: SNOMEDCT:188751002][accessDate: 04-11-2010]
GeneRIF:15073036
GeneRIF:12414343
Leukemia morphology
GeneRIF:15515013
GeneRIF:11489963
GeneRIF:12682273
[X]Other leukaemia of unspecified cell type[accessedResource: SNOMEDCT:190162005][accessDate: 04-11-2010]
GeneRIF:16103065
GeneRIF:12204872
chronic leukemia, disease (disorder)
GeneRIF:15026336
chronic leukemia NOS[accessedResource: DOID:1240][accessDate: 04-11-2010]
GeneRIF:12217801
LEUKEMIA NOS W/O REMSION[accessedResource: ICD9:208.90][accessDate: 04-11-2010]
GeneRIF:15704129
Leukemia of unspecified cell type
Leukemia, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
GeneRIF:12592338
GeneRIF:15725473
Leukaemia[accessedResource: SNOMEDCT:93143009][accessDate: 04-11-2010]
GeneRIF:12816872
ICD9:208.81
GeneRIF:11869944
GeneRIF:12454742
GeneRIF:15834506
GeneRIF:15815718
GeneRIF:14704031
GeneRIF:12384147
GeneRIF:15676214
GeneRIF:12002748
GeneRIF:11996108
OTH SPF LEUK W REMSION
GeneRIF:12091340
GeneRIF:11792409
Other specified leukemia (disorder)
chronic leukaemia NOS[accessedResource: DOID:1240][accessDate: 04-11-2010]
ICD9:208
SNOMEDCT:188762002
OTH LEUK UNS CL W RMSON[accessedResource: ICD9:208.81][accessDate: 04-11-2010]
Chronic leukemia [obs]
GeneRIF:12082639
A malignant (clonal) hematologic disorder, involving hematopoietic stem cells and characterized by the presence of primitive or atypical myeloid or lymphoid cells in the bone marrow and the blood. Leukemias are classified as acute or chronic based on the degree of cellular differentiation and the predominant cell type present. Leukemia is usually associated with anemia, fever, hemorrhagic episodes, and splenomegaly. Common leukemias include acute myeloid leukemia, chronic myelogenous leukemia, acute lymphoblastic or precursor lymphoblastic leukemia, and chronic lymphocytic leukemia. Treatment is vital to patient survival; untreated, the natural course of acute leukemias is normally measured in weeks or months, while that of chronic leukemias is more often measured in months or years.[accessedResource: NCIt:C3161][accessDate: 04-11-2010]
GeneRIF:11922610
GeneRIF:11042511
SNOMEDCT:190162005
GeneRIF:15756419
[X]Other specified leukaemias[accessedResource: SNOMEDCT:190161003][accessDate: 04-11-2010]
FBbt:00004959
paragonium
paragonium[accessedResource: FBbt:00004959][accessDate: 04-11-2010]
male accessory gland
James Malone
A plasma cell disorder in which an abnormal amount of a single immunoglobulin is present in the serum. Up to 25% of cases of monoclonal gammopathy of undetermined significance (MGUS) progress to a B-cell malignancy or myeloma. MGUS may occur in conjunction with various carcinomas, chronic inflammatory and infectious conditions, and other diseases.
Benign Monoclonal Gammopathy
MGUS - Monoclonal gammopathy of uncertain significance
Monoclonal gammopathy of undetermined significance[accessedResource: SNOMEDCT:35601003][accessDate: 04-11-2010]
SNOMEDCT:277577000
DOID:7442
Benign Monoclonal Gammopathy[accessedResource: NCIt:C3996][accessDate: 04-11-2010]
GeneRIF:14677065
Monoclonal Gammopathy of Unknown Significance
monoclonal gammopathy
Monoclonal Gammopathy Of Undetermined Significance (MGUS)[accessedResource: NCIt:C3996][accessDate: 04-11-2010]
James Malone
monoclonal gammopathy of uncertain significance[accessedResource: DOID:7442][accessDate: 04-11-2010]
MGUS - Monoclonal gammopathy of uncertain significance[accessedResource: SNOMEDCT:277577000][accessDate: 04-11-2010]
NCIt:C3996
Monoclonal gammopathy of undetermined significance (morphologic abnormality)[accessedResource: DOID:7442][accessDate: 04-11-2010]
Monoclonal Gammopathy Of Undetermined Significance (MGUS)
Paraproteinaemia[accessedResource: SNOMEDCT:35601003][accessDate: 04-11-2010]
A plasma cell disorder in which an abnormal amount of a single immunoglobulin is present in the serum. Up to 25% of cases of monoclonal gammopathy of undetermined significance (MGUS) progress to a B-cell malignancy or myeloma. MGUS may occur in conjunction with various carcinomas, chronic inflammatory and infectious conditions, and other diseases.[accessedResource: NCIt:C3996][accessDate: 04-11-2010]
MGUS[accessedResource: DOID:7442][accessDate: 04-11-2010]
MGUS
Monoclonal gammopathy of uncertain significance (disorder)[accessedResource: SNOMEDCT:277577000][accessDate: 04-11-2010]
Monoclonal gammopathy of undetermined significance
Paraproteinaemia
Paraproteinemia[accessedResource: SNOMEDCT:35601003][accessDate: 04-11-2010]
SNOMEDCT:35601003
Monoclonal gammopathy of uncertain significance
Paraproteinemia
Monoclonal gammopathy of uncertain significance (disorder)
Monoclonal Gammopathy of Unknown Significance[accessedResource: NCIt:C3996][accessDate: 04-11-2010]
Monoclonal gammopathy of undetermined significance (morphologic abnormality)
true
obsolete_percent oxygen concentration
embryonic day 12.5
Tomasz Adamusiak
Jie Zheng
Helen Parkinson
microarray
An instrument which consists of nucleic acid or protein molecules bound to a substrate
array
HT1376
Ele Holloway
James Malone
HT-1376
IB3-1
James Malone
FMAID:9664
foot
Tomasz Adamusiak
2.5
true
obsolete_liver heptocellular carcinoma
James Malone
duplicate of EFO_0000182
MKN74
Well differentiated human gastric adenocarcinoma cell line.[accessedResource: BTO:0002383][accessDate: 04-11-2010]
MKN-74 cell
Ele Holloway
MKN74 cell[accessedResource: BTO:0002383][accessDate: 04-11-2010]
MKN74 cell
Well differentiated human gastric adenocarcinoma cell line.
JCRB0255
BTO:0002383
MKN-74
MKN-74 cell[accessedResource: BTO:0002383][accessDate: 04-11-2010]
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158898&type=germplasm
CS57874 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158898&type=germplasm
CS57874
James Malone
PMID:2784066
lp-1
LP1
Tomasz Adamusiak
KS - Kaposi's sarcoma
Kaposi sarcoma, morphology
GeneRIF:15280476
Epidemic Kaposi's sarcoma[accessedResource: SNOMEDCT:109385007][accessDate: 04-11-2010]
Kaposi's sarcoma-associated herpesvirus (KSHV)
GeneRIF:15964376
GeneRIF:15220403
SPF STS - KPSI'S SARCOMA[accessedResource: ICD9:176.8][accessDate: 04-11-2010]
ICD9:176
GeneRIF:15471957
Kaposi's sarcoma
SPF STS - KPSI'S SARCOMA
GeneRIF:12719589
KAPOSI'S SARCOMA NOS[accessedResource: ICD9:176.9][accessDate: 04-11-2010]
GeneRIF:12531804
A malignant neoplasm characterized by a vascular proliferation which usually contains blunt endothelial cells. Erythrocyte extravasation and hemosiderin deposition are frequently present. The most frequent site of involvement is the skin; however it may also occur internally. It generally develops in people with compromised immune systems including those with acquired immune deficiency syndrome (AIDS).
GeneRIF:15246275
Kaposi sarcoma[accessedResource: SNOMEDCT:109385007][accessDate: 04-11-2010]
GeneRIF:12513914
KAPOSI'S SARCOMA NOS
ICD9:176.9
SNOMEDCT:109385007
A sarcoma and Human herpesvirus 8 infectious disease that is transmitted_by human herpesvirus 8 (HHV8).[accessedResource: DOID:8632][accessDate: 04-11-2010]
[M]Kaposi's sarcoma
Kaposi's sarcoma, morphology[accessedResource: SNOMEDCT:49937004][accessDate: 04-11-2010]
Kaposi - Kaposi's Sarcoma[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
Kaposi's sarcoma, morphology
SNOMEDCT:49937004
GeneRIF:12875994
KS[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
Kaposi's sarcoma, other specified sites
NCIt:C9087
Kaposi sarcoma, morphology[accessedResource: SNOMEDCT:49937004][accessDate: 04-11-2010]
James Malone
Kaposi's sarcoma, unspecified
GeneRIF:12750160
KS - Kaposi's sarcoma[accessedResource: SNOMEDCT:109385007][accessDate: 04-11-2010]
Multiple hemorrhagic sarcoma[accessedResource: SNOMEDCT:49937004][accessDate: 04-11-2010]
Kaposi's sarcoma (morphologic abnormality)
GeneRIF:14627715
DOID:8632
GeneRIF:15765147
Kaposi's sarcoma (disorder)
GeneRIF:15331727
Multiple Hemorrhagic Sarcoma
Kaposi's sarcoma (disorder)[accessedResource: SNOMEDCT:109385007][accessDate: 04-11-2010]
[X]Kaposi's sarcoma, unspecified (disorder)
Kaposi's sarcoma, other specified sites[accessedResource: ICD9:176.8][accessDate: 04-11-2010]
GeneRIF:15194757
GeneRIF:12915579
GeneRIF:12176919
GeneRIF:15994556
A malignant neoplasm characterized by a vascular proliferation which usually contains blunt endothelial cells. Erythrocyte extravasation and hemosiderin deposition are frequently present. The most frequent site of involvement is the skin; however it may also occur internally. It generally develops in people with compromised immune systems including those with acquired immune deficiency syndrome (AIDS).[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
SNOMEDCT:190112000
[M]Kaposi's sarcoma[accessedResource: SNOMEDCT:49937004][accessDate: 04-11-2010]
[X]Kaposi's sarcoma, unspecified[accessedResource: SNOMEDCT:190112000][accessDate: 04-11-2010]
[X]Kaposi's sarcoma, unspecified
Kaposi's sarcoma, morphology (morphologic abnormality)
A sarcoma that is caused by human herpesvirus 8 (HHV8), which is also called Kaposi's sarcoma-associated herpesvirus (KSHV).
GeneRIF:12592400
Multiple haemorrhagic sarcoma[accessedResource: SNOMEDCT:49937004][accessDate: 04-11-2010]
Kaposi's sarcoma (clinical)
Kaposi's sarcoma-associated herpesvirus (KSHV)[accessedResource: DOID:8632][accessDate: 04-11-2010]
Kaposi's sarcoma (clinical)[accessedResource: SNOMEDCT:109385007][accessDate: 04-11-2010]
A sarcoma and Human herpesvirus 8 infectious disease that is transmitted_by human herpesvirus 8 (HHV8).
Multiple haemorrhagic sarcoma
KS
GeneRIF:12388718
[X]Kaposi's sarcoma, unspecified (disorder)[accessedResource: SNOMEDCT:190112000][accessDate: 04-11-2010]
ICD9:176.8
Kaposi's sarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:49937004][accessDate: 04-11-2010]
Epidemic Kaposi's sarcoma
Kaposi Sarcoma
GeneRIF:12915577
Kaposi's sarcoma, morphology (morphologic abnormality)[accessedResource: SNOMEDCT:49937004][accessDate: 04-11-2010]
Kaposi's sarcoma, unspecified[accessedResource: ICD9:176.9][accessDate: 04-11-2010]
Kaposi - Kaposi's Sarcoma
GeneRIF:12388720
segment
One of the repeated divisions of the whole organism.
segment[accessedResource: FBbt:00000003][accessDate: 04-11-2010]
MAT:0000271
One of the repeated divisions of the whole organism.[accessedResource: FBbt:00000003][accessDate: 04-11-2010]
adult segment
FBbt:00000003
James Malone
nonionic surfactants
nonionic surfactant
http://www.ebi.ac.uk/efo/EFO_0001581
A surfactant with an uncharged hydrophilic headgroup.
non ionic surfactant
James Malone
lateral shoot meristem
James Malone
OntologyMappingImporter following MAT:0000225
MAT:0000225
PO:0006344
MV4II
James Malone
Ele Holloway
MCC:0000363
OVCAR3
Tomasz Adamusiak
FMA:70504
Subdivision of common carotid artery
Common carotid arterial subdivision
Subdivision of common carotid artery[accessedResource: FMA:70504][accessDate: 04-11-2010]
division of carotid artery
James Malone
Detroit 562
Detroit562
James Malone
Ele Holloway
granulosa cell of ovary
A supporting cell for the developing female gamete in the ovary of mammals. They develop from the coelomic epithelial cells of the gonadal ridge. Granulosa cells form a single layer around the mammalian oocyte in the primordial ovarian follicle and advance to form a multilayered cumulus oophorus surrounding the ovum in the Graafian follicle. The major functions of granulosa cells include the production of steroids and LH receptors.
A supporting cell for the developing female gamete in the ovary of mammals. They develop from the coelomic epithelial cells of the gonadal ridge. Granulosa cells form a single layer around the mammalian oocyte in the primordial ovarian follicle and advance to form a multilayered cumulus oophorus surrounding the ovum in the Graafian follicle. The major functions of granulosa cells include the production of steroids and LH receptors.[accessedResource: CL:0000501][accessDate: 04-11-2010]
CL:0000501
granulosa cell
granulosa cell of ovary[accessedResource: CL:0000501][accessDate: 04-11-2010]
TO:0000542
MO_699
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#reference_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#reference_design[accessedResource: MO_699][accessDate: 04-11-2010]
reference design
Tomasz Adamusiak
GM12234
James Malone
Obsolete: No longer required in EFO
true
NCIt:C22552
Bone Marrow (MMHCC)
obsolete_bone marrow MMHCC
James Malone
Jie Zheng
INS-1
MCC:0000246
INS-1 cell
Pancreatic beta -cell line of rat origin.
Tomasz Adamusiak
INS-1 cell[accessedResource: BTO:0002135][accessDate: 04-11-2010]
BTO:0002135
Pancreatic beta -cell line of rat origin.[accessedResource: BTO:0002135][accessDate: 04-11-2010]
ZR751
James Malone
James Malone
chronic progressive external ophthalmoplegia [Ambiguous][accessedResource: DOID:12558][accessDate: 04-11-2010]
HP:0000590
chronic progressive external ophthalmoplegia [Ambiguous]
PEO syndrome
progressive external ophthalmoplegia (disorder)[accessedResource: DOID:12558][accessDate: 04-11-2010]
PEO
progressive external ophthalmoplegia
chronic progressive external ophthalmoplegia
Ele Holloway
chronic progressive external ophthalmoplegia[accessedResource: DOID:12558][accessDate: 04-11-2010]
DOID:12558
Progressive external ophthalmoplegia (disorder)
FBbt:00004864
The reproductive system in women includes the ovaries, the fallopian tubes, the uterus (womb), the cervix, and the vagina (birth canal).
.[accessedResource: FBbt:00004864][accessDate: 04-11-2010]
.
EMAPA:17959
Gonochoristic organism that can produce female gametes.
gynaecological tissue
Gonochoristic organism that can produce female gametes.[accessedResource: ZFA:0000303][accessDate: 04-11-2010]
Female genital system
TADS:0000352
BTO:0000083
James Malone
EHDAA:8116
EV:0100110
female organism[accessedResource: ZFA:0000303][accessDate: 04-11-2010]
MA:0000381
The reproductive system in women includes the ovaries, the fallopian tubes, the uterus (womb), the cervix, and the vagina (birth canal).[accessedResource: BTO:0000083][accessDate: 04-11-2010]
female reproductive system
ZFA:0000303
FMAID:45663
female organism
gynaecological tissue[accessedResource: BTO:0000083][accessDate: 04-11-2010]
Female genital system[accessedResource: FMAID:45663][accessDate: 04-11-2010]
XAO:0000156
Tomasz Adamusiak
A benign neuroblastic tumor of the sympathetic nervous system that occurs in childhood. Ganglioneuroma typically arises from the sympathetic trunk in the mediastinum. Histologic features include spindle cell proliferation (resembling a neurofibroma) and the presence of large ganglion cells. Common presenting features include a palpable abdominal mass, hepatomegaly, and a thoracic mass detected on routine chest X-ray.[accessedResource: NCIt:C3049][accessDate: 04-11-2010]
James Malone
NIFSTD:birnlex_12617
A benign neuroblastic tumor of the sympathetic nervous system that occurs in childhood. Ganglioneuroma typically arises from the sympathetic trunk in the mediastinum. Histologic features include spindle cell proliferation (resembling a neurofibroma) and the presence of large ganglion cells. Common presenting features include a palpable abdominal mass, hepatomegaly, and a thoracic mass detected on routine chest X-ray.
ganglioneuroma
A benign neoplasm that usually arises from the sympathetic trunk in the mediastinum. Histologic features include spindle cell proliferation (resembling a neurofibroma) and the presence of large ganglion cells. The tumor may present clinically with HORNER SYNDROME or diarrhea due to ectopic production of vasoactive intestinal peptide (MeSH).
A benign neoplasm that usually arises from the sympathetic trunk in the mediastinum. Histologic features include spindle cell proliferation (resembling a neurofibroma) and the presence of large ganglion cells. The tumor may present clinically with HORNER SYNDROME or diarrhea due to ectopic production of vasoactive intestinal peptide (MeSH).[accessedResource: NIFSTD:birnlex_12617][accessDate: 04-11-2010]
NCIt:C3049
Gangliocytoma
Ganglioneuroma (Schwannian Stroma-Dominant)[accessedResource: NCIt:C3049][accessDate: 04-11-2010]
Gangliocytoma[accessedResource: NIFSTD:birnlex_12617][accessDate: 04-11-2010]
Ganglioneuroma (Schwannian Stroma-Dominant)
MA:0000289
vomeronasal organ
James Malone
A tetrahydroxyflavone that has formula C15H10O6.
http://www.ebi.ac.uk/efo/EFO_0001534
InChI=1/C15H10O6/c16-8-2-3-9-12(6-8)21-15(14(20)13(9)19)7-1-4-10(17)11(18)5-7/h1-6,16-18,20H
Oc1ccc2c(c1)oc(-c1ccc(O)c(O)c1)c(O)c2=O
2-(3,4-Dihydroxyphenyl)-3,7-dihydroxy-4H-1-benzopyran-4-one
7,3',4'-Trihydroxyflavonol
InChIKey=XHEFDIBZLJXQHF-UHFFFAOYAQ
5-Desoxyquercetin
2-(3,4-dihydroxyphenyl)-3,7-dihydroxy-4H-chromen-4-one
fisetin
3,3',4',7-Tetrahydroxyflavone
CHEBI:42567
C15H10O6
CHEBI:53439
http://www.ebi.ac.uk/efo/EFO_0002734
calcineurin
Tomasz Adamusiak
Ele Holloway
MAT:0000217
BTO:0001276
The slender tube formed by the pollen grain that penetrates an ovule and releases the male gametes.
James Malone
pollen tube
PO:0006345
The slender tube formed by the pollen grain that penetrates an ovule and releases the male gametes.[accessedResource: BTO:0001276][accessDate: 04-11-2010]
SKNAS
SK-N-AS
James Malone
Ele Holloway
adult oesophagus[accessedResource: TGMA:0000134][accessDate: 04-11-2010]
esophagus
AAO:0000145
The part of the stomodeum following the pharynx.
TADS:0000057
Organ with organ cavity which is continuous superiorly with the pharynx and inferiorly with the stomach. Examples: There is only one esophagus.
A muscular tube that in humans is about nine inches (23 centimeters) long and passes from the pharynx down the neck between the trachea and the spinal column and behind the left bronchus where it pierces the diaphragm slightly to the left of the middle line and joins the cardiac end of the stomach.
oesophagus[accessedResource: TAO:0000204][accessDate: 04-11-2010]
ZFA:0000204
Gullet[accessedResource: FMAID:7131][accessDate: 04-11-2010]
EV:0100069
EHDAA:2937
James Malone
FBbt:00005381
FMAID:7131
MAT:0000048
oesophagus
TAO:0000204
adult oesophagus
Gullet
XAO:0000127
The part of the stomodeum following the pharynx.[accessedResource: TGMA:0000134][accessDate: 04-11-2010]
BTO:0000959
MFO:0003000
EMAPA:16833
A muscular tube that in humans is about nine inches (23 centimeters) long and passes from the pharynx down the neck between the trachea and the spinal column and behind the left bronchus where it pierces the diaphragm slightly to the left of the middle line and joins the cardiac end of the stomach.[accessedResource: BTO:0000959][accessDate: 04-11-2010]
TGMA:0000134
SAEL:74
A diverse group of metabolic diseases characterized by errors in the biosynthetic pathway of HEME in the LIVER, the BONE MARROW, or both. They are classified by the deficiency of specific enzymes, the tissue site of enzyme defect, or the clinical features that include neurological (acute) or cutaneous (skin lesions). Porphyrias can be hereditary or acquired as a result of toxicity to the hepatic or erythropoietic marrow tissues.[accessedResource: MSH:D011164][accessDate: 04-11-2010]
Disorder of porphyrin and heme metabolism[accessedResource: SNOMEDCT:29094004][accessDate: 04-11-2010]
ICD9:277.1
Disorder of porphyrin and heme metabolism
Porphyrinopathy[accessedResource: SNOMEDCT:371628009][accessDate: 04-11-2010]
DIS PORPHYRIN METABOLISM[accessedResource: ICD9:277.1][accessDate: 04-11-2010]
Porphyrias[accessedResource: MSH:D011164][accessDate: 04-11-2010]
disorder of porphyrin and hem metabolism[accessedResource: DOID:13268][accessDate: 04-11-2010]
A diverse group of metabolic diseases characterized by errors in the biosynthetic pathway of HEME in the LIVER, the BONE MARROW, or both. They are classified by the deficiency of specific enzymes, the tissue site of enzyme defect, or the clinical features that include neurological (acute) or cutaneous (skin lesions). Porphyrias can be hereditary or acquired as a result of toxicity to the hepatic or erythropoietic marrow tissues.
disorder of porphyrin and hem metabolism
MSH:D011164
Porphyria (disorder)[accessedResource: DOID:13268][accessDate: 04-11-2010]
SNOMEDCT:29094004
Disorders of porphyrin metabolism
Hematoporphyria[accessedResource: DOID:13268][accessDate: 04-11-2010]
Disorders of porphyrin metabolism[accessedResource: ICD9:277.1][accessDate: 04-11-2010]
James Malone
Hematoporphyria
Disorder of porphyrin metabolism[accessedResource: SNOMEDCT:29094004][accessDate: 04-11-2010]
SNOMEDCT:190916001
SNOMEDCT:371628009
DIS PORPHYRIN METABOLISM
Porphyrinopathy (disorder)[accessedResource: SNOMEDCT:371628009][accessDate: 04-11-2010]
Porphyria NOS (disorder)
disorder of porphyrin metabolism (disorder)
Disorder of porphyrin and haem metabolism[accessedResource: SNOMEDCT:29094004][accessDate: 04-11-2010]
porphyria
Porphyrinopathy
Porphyria (disorder)
Disorder of porphyrin and haem metabolism
GeneRIF:16026339
Disorder of porphyrin metabolism, NOS[accessedResource: SNOMEDCT:29094004][accessDate: 04-11-2010]
Porphyria NOS[accessedResource: SNOMEDCT:190916001][accessDate: 04-11-2010]
Disorder of porphyrin metabolism (disorder)[accessedResource: SNOMEDCT:29094004][accessDate: 04-11-2010]
Porphyria NOS (disorder)[accessedResource: DOID:13268][accessDate: 04-11-2010]
Disorder of porphyrin metabolism
Porphyrinopathy (disorder)
Porphyrias
Porphyria NOS
Disorder of porphyrin metabolism, NOS
DOID:13268
Disorders of porphyrin metabolism (disorder)
CL:0000233
A non-nucleated disk-shaped cell formed by extrusion from megakaryocytes, found in the blood of all mammals, and mainly involved in blood coagulation.
thrombocyte[accessedResource: CL:0000233][accessDate: 04-11-2010]
James Malone
blood platelet[accessedResource: CL:0000233][accessDate: 04-11-2010]
A non-nucleated disk-shaped cell formed by extrusion from megakaryocytes, found in the blood of all mammals, and mainly involved in blood coagulation.[accessedResource: CL:0000233][accessDate: 04-11-2010]
platelet
blood platelet
thrombocyte
GM11995
James Malone
MAT:0000450
James Malone
basal nucleus[accessedResource: BTO:0000235][accessDate: 04-11-2010]
MA:0000184
basal ganglion
Tomasz Adamusiak
BTO:0000235
FMAID:84013
Set of basal ganglia
basal nucleus\]
Set of basal ganglia[accessedResource: FMAID:84013][accessDate: 04-11-2010]
Any of four deeply placed masses of gray matter (as the amygdala) in each cerebral hemisphere. Location: The basal ganglion is located deep within the cerebral hemispheres in the telencephalon region of the brain. It consists of the corpus stratium, subthalamic nucleus and the substantia nigra.[accessedResource: BTO:0000235][accessDate: 04-11-2010]
Subcortical masses of gray matter in the forebrain and midbrain that are richly interconnected and so viewed as a functional system. The nuclei usually included are the caudate nucleus (caudoputamen in rodents), putamen, globus pallidus, substantia nigra (pars compacta and pars reticulata) and the subthalamic nucleus. Some also include the nucleus accumbens and ventral pallidum.
Set of basal nuclei[accessedResource: FMAID:84013][accessDate: 04-11-2010]
Basal ganglia[accessedResource: FMAID:84013][accessDate: 04-11-2010]
Any of four deeply placed masses of gray matter (as the amygdala) in each cerebral hemisphere. Location: The basal ganglion is located deep within the cerebral hemispheres in the telencephalon region of the brain. It consists of the corpus stratium, subthalamic nucleus and the substantia nigra.
Basal ganglia set
Set of basal nuclei
Basal ganglia
Basal ganglia set[accessedResource: FMAID:84013][accessDate: 04-11-2010]
NIFSTD:birnlex_826
CL:0000586
The reproductive cell in multicellular organisms.
The reproductive cell in multicellular organisms.[accessedResource: CL:0000586][accessDate: 04-11-2010]
germ cell
Tomasz Adamusiak
Jie Zheng
PO:0009046
GRO:0005367[accessedResource: BTO:0000469][accessDate: 04-11-2010]
GRO:0005367
MAT:0000231
The reproductive structure of the anthophyta or angiosperms.
flower[accessedResource: MAT:0000231][accessDate: 04-11-2010]
James Malone
flower structure
flower
The reproductive structure of the anthophyta or angiosperms.[accessedResource: BTO:0000469][accessDate: 04-11-2010]
BTO:0000469
FBbt:00005537
wing disc-derived cell-line
wing disc-derived cell-line[accessedResource: FBbt:00005537][accessDate: 04-11-2010]
antennal primordium2
James Malone
MO_60
The photoperiod and type (e.g., natural, restricted wavelength) of light exposure.
light
Tomasz Adamusiak
Jie Zheng
James Malone
CHEBI:50842
4-chloro-5-(methylamino)-2-[3-(trifluoromethyl)phenyl]-3(2H)-pyridazinone
Zorial
C12H9ClF3N3O
Ele Holloway
Solicam
CNC1=C(Cl)C(=O)N(N=C1)c2cccc(c2)C(F)(F)F
InChIKey=NVGOPFQZYCNLDU-UHFFFAOYAZ
http://www.ebi.ac.uk/efo/EFO_0002416
InChI=1/C12H9ClF3N3O/c1-17-9-6-18-19(11(20)10(9)13)8-4-2-3-7(5-8)12(14,15)16/h2-6,17H,1H3
4-chloro-5-(methylamino)-2-(alpha,alpha,alpha-trifluoro-m-tolyl)-3(2H)-pyridazinone
A pyridazinone that has formula C12H9ClF3N3O.
SAN 9789
norflurazon
James Malone
4-chloro-5-(methylamino)-2-[3-(trifluoromethyl)phenyl]pyridazin-3(2H)-one
MO_791
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#temperature[accessedResource: MO_791][accessDate: 04-11-2010]
A physical quality of the thermal energy of a system.
Temperature is a physical quality of the thermal energy of a system.
PATO:0000146
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#temperature
A physical quality of the thermal energy of a system.[accessedResource: PATO:0000146][accessDate: 04-11-2010]
temperature
James Malone
Adipose Tissue (MMHCC)
true
Fatty Tissue[accessedResource: NCIt:C22703][accessDate: 10-05-2010]
obsolete_adipose tissue MMHCC
James Malone
Fatty Tissue
NCIt:C22703
Adipose Tissue (MMHCC)[accessedResource: NCIt:C22703][accessDate: 10-05-2010]
No longer required in EFO (no supporting use case)
1-isothiocyanatonaphthalene
1-naphthyl isothiocyanate
http://www.ebi.ac.uk/efo/EFO_0001469
James Malone
alpha-Naphthyl isothiocyanate
CHEBI:35455
1-Naphthylisothiocyanate
InChIKey=JBDOSUUXMYMWQH-UHFFFAOYAA
S=C=Nc1cccc2ccccc12
InChI=1/C11H7NS/c13-8-12-11-7-3-5-9-4-1-2-6-10(9)11/h1-7H
ANIT
C4H11N5
InChIKey=XZWYZXLIPXDOLR-WXQAPKLBCT
CN(C)C(=N)NC(N)=N
A guanidine that has formula C4H11N5.
metformin
CHEBI:6801
1,1-Dimethylbiguanide
N,N-dimethylimidodicarbonimidic diamide
InChI=1/C4H11N5/c1-9(2)4(7)8-3(5)6/h1-2H3,(H5,5,6,7,8)/f/h5,7-8H,6H2
http://www.ebi.ac.uk/efo/EFO_0001570
Jie Zheng
trophozoite
A developmental stage of the Plasmodium life cycle found within the erythrocyte.[accessedResource: IDOMAL:0000304][accessDate: 04-11-2010]
Tomasz Adamusiak
A developmental stage of the Plasmodium life cycle found within the erythrocyte.
trophozoite stage
trophozoite stage[accessedResource: IDOMAL:0000304][accessDate: 04-11-2010]
IDOMAL:0000304
chronic periodontitis NOS (disorder)[accessedResource: DOID:824][accessDate: 04-11-2010]
GeneRIF:15025215
Periodontitis, NOS
NCIt:C35326
Pericementitis[accessedResource: MSH:D010518][accessDate: 04-11-2010]
Chronic periodontitis NOS[accessedResource: SNOMEDCT:196369002][accessDate: 04-11-2010]
SNOMEDCT:41565005
Periodontitides
DOID:824
Chronic periodontitis
GeneRIF:12469211
GeneRIF:15845467
GeneRIF:16208406
Chronic pericementitis (disorder)
chronic pericementitis[accessedResource: DOID:824][accessDate: 04-11-2010]
GeneRIF:12595898
NCIt:C34918
James Malone
SNOMEDCT:196369002
GeneRIF:15974847
GeneRIF:14734770
Periodontitis, NOS[accessedResource: SNOMEDCT:41565005][accessDate: 04-11-2010]
GeneRIF:15312099
Inflammation and loss of connective tissues supporting or surrounding the teeth. This may involve any part of the PERIODONTIUM. Periodontitis is currently classified by disease progression (CHRONIC PERIODONTITIS; AGGRESSIVE PERIODONTITIS) instead of age of onset. (From 1999 International Workshop for a Classification of Periodontal Diseases and Conditions, American Academy of Periodontology)[accessedResource: MSH:D010518][accessDate: 04-11-2010]
ICD9:523.4
GeneRIF:11846846
chronic periodontitis (disorder)
MSH:D010518
Pericementitides[accessedResource: MSH:D010518][accessDate: 04-11-2010]
Periodontitides[accessedResource: MSH:D010518][accessDate: 04-11-2010]
chronic periodontitis NOS (disorder)
GeneRIF:15491310
SNOMEDCT:196365008
SNOMEDCT:5689008
Periodontitis (disorder)[accessedResource: DOID:824][accessDate: 04-11-2010]
GeneRIF:12834496
Chronic periodontitis NOS
Pericementitides
GeneRIF:12795790
Inflammation and loss of connective tissues supporting or surrounding the teeth. This may involve any part of the PERIODONTIUM. Periodontitis is currently classified by disease progression (CHRONIC PERIODONTITIS; AGGRESSIVE PERIODONTITIS) instead of age of onset. (From 1999 International Workshop for a Classification of Periodontal Diseases and Conditions, American Academy of Periodontology)
GeneRIF:15279649
periodontitis
Chronic pericementitis (disorder)[accessedResource: SNOMEDCT:196365008][accessDate: 04-11-2010]
Periodontitis (disorder)
GeneRIF:16052575
GeneRIF:12370398
chronic pericementitis
GeneRIF:12759451
GeneRIF:16018746
Pericementitis
Chronic periodontitis (disorder)[accessedResource: SNOMEDCT:5689008][accessDate: 04-11-2010]
chronic Periodontitis[accessedResource: DOID:824][accessDate: 04-11-2010]
GeneRIF:12747454
James Malone
MAT:0000214
Tomasz Adamusiak
CL:0000250
A haploid (1n) spore developing into a female gametophyte in heterosporous plants.
PO:0020019
megaspore
A haploid (1n) spore developing into a female gametophyte in heterosporous plants.[accessedResource: CL:0000250][accessDate: 04-11-2010]
OntologyMappingImporter following MAT:0000214
An adenocarcinoma in which the tumor elements are arranged as finger-like processes or as a solid spherical nodule projecting from an epithelial surface.[accessedResource: MSH:D018283][accessDate: 04-11-2010]
[M]Papillary cystadenocarcinoma, NOS
Papillary Cystadenocarcinomas[accessedResource: MSH:D018283][accessDate: 04-11-2010]
Cystadenocarcinomas, Papillary
Papillary cystadenocarcinoma, NOS[accessedResource: SNOMEDCT:2735009][accessDate: 04-11-2010]
Papillocystic adenocarcinoma
[M]Papillary cystadenocarcinoma, NOS[accessedResource: SNOMEDCT:189687009][accessDate: 04-11-2010]
[M]Papillary cystadenocarcinoma, NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189687009][accessDate: 04-11-2010]
GeneRIF:12911720
Papillary cystadenocarcinoma, NOS (morphologic abnormality)[accessedResource: DOID:3110][accessDate: 04-11-2010]
Papillary cystadenocarcinoma, NOS
[M]Papillary cystadenocarcinoma, NOS (morphologic abnormality)
NCIt:C3777
Papillary cystadenocarcinoma (morphologic abnormality)
A malignant cystic serous or mucinous epithelial neoplasm characterized by the presence of malignant glandular epithelial cells forming papillary structures. Stromal invasion is present.[accessedResource: NCIt:C3777][accessDate: 04-11-2010]
SNOMEDCT:189687009
MSH:D018283
SNOMEDCT:2735009
Papillary cystadenocarcinoma, NOS (morphologic abnormality)
An adenocarcinoma in which the tumor elements are arranged as finger-like processes or as a solid spherical nodule projecting from an epithelial surface.
A malignant cystic serous or mucinous epithelial neoplasm characterized by the presence of malignant glandular epithelial cells forming papillary structures. Stromal invasion is present.
Papillary cystadenocarcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:2735009][accessDate: 04-11-2010]
DOID:3110
James Malone
Papillocystic adenocarcinoma[accessedResource: SNOMEDCT:2735009][accessDate: 04-11-2010]
papillary cystadenocarcinoma
A carbon group element atom that has formula Si.
silicio
silicon atom
InChI=1/Si
Jie Zheng
A carbon group element that has formula Si.
James Malone
Ele Holloway
InChIKey=XUIMIQQOPSSXEZ-UHFFFAOYAB
silicon
Silizium
14Si
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#silicon[accessedResource: MO_382][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0002420
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#silicon
Si
MO_382
silicium
NHA
Normal Human Astrocytes
NHA is a cell line derived from normal (healthy) human astrocyte cells.
James Malone
zebrafish
http://www.ebi.ac.uk/efo/EFO_0002639
Danio rerio
James Malone
murine neuroblastoma cholinergic cell line
InChIKey=RZEKVGVHFLEQIL-QVUQFMIFCW
4-[5-(4-methylphenyl)-3-(trifluoromethyl)-1H-pyrazol-1-yl]benzenesulfonamide
p-(5-p-Tolyl-3-(trifluoromethyl)pyrazol-1-yl)benzenesulfonamide
celecoxib
CHEBI:41423
James Malone
http://www.ebi.ac.uk/efo/EFO_0001501
A pyrazole that has formula C17H14F3N3O2S.
Celebrex (TN)
InChI=1/C17H14F3N3O2S/c1-11-2-4-12(5-3-11)15-10-16(17(18,19)20)22-23(15)13-6-8-14(9-7-13)26(21,24)25/h2-10H,1H3,(H2,21,24,25)/f/h21H2
C17H14F3N3O2S
Cc1ccc(cc1)-c1cc(nn1-c1ccc(cc1)S(N)(=O)=O)C(F)(F)F
SNOMEDCT:200996000
Psoriasis and similar disorders NOS (disorder)
SNOMEDCT:200955003
James Malone
Psoriasis and similar disorders (navigational concept)[accessedResource: SNOMEDCT:200955003][accessDate: 04-11-2010]
ICD9:696
psoriasis
Psoriasis and similar disorders (navigational concept)
Other psoriasis and similar disorders excluding psoriatic arthropathy[accessedResource: ICD9:696.1][accessDate: 04-11-2010]
Other psoriasis and similar disorders (disorder)[accessedResource: SNOMEDCT:200996000][accessDate: 04-11-2010]
Other psoriasis and similar disorders
PITYRIASIS NEC & NOS[accessedResource: ICD9:696.5][accessDate: 04-11-2010]
Other and unspecified pityriasis[accessedResource: ICD9:696.5][accessDate: 04-11-2010]
PSORIAS RELATED DIS NEC[accessedResource: ICD9:696.8][accessDate: 04-11-2010]
Psoriasis and similar disorders NOS[accessedResource: SNOMEDCT:200997009][accessDate: 04-11-2010]
ICD9:696.1
OTHER PSORIASIS
Other psoriasis and similar disorders excluding psoriatic arthropathy
SNOMEDCT:200997009
Psoriasis and similar disorders NOS (disorder)[accessedResource: SNOMEDCT:200997009][accessDate: 04-11-2010]
Psoriasis and similar disorders[accessedResource: ICD9:696][accessDate: 04-11-2010]
Other psoriasis and similar disorders[accessedResource: ICD9:696.8][accessDate: 04-11-2010]
OTHER PSORIASIS[accessedResource: ICD9:696.1][accessDate: 04-11-2010]
ICD9:696.8
Other and unspecified pityriasis
Other psoriasis and similar disorders (disorder)
Psoriasis and similar disorders (disorder)
DOID:8893
ICD9:696.5
Psoriasis and similar disorders (disorder)[accessedResource: SNOMEDCT:200955003][accessDate: 04-11-2010]
Psoriasis and similar disorders NOS
Psoriasis and similar disorders
PSORIAS RELATED DIS NEC
PITYRIASIS NEC & NOS
L428
James Malone
Ele Holloway
FBbt:00005663
embryonic central brain glia
James Malone
MFO:0003640
XAO:0003033
SAEL:72
AAO:0000334
Any sense organ (FBbt:00005155) that has function 'detection of chemical stimulus involved in sensory perception (GO:0050907)'.
olfactory system[accessedResource: TAO:0001149][accessDate: 04-11-2010]
FBbt:00005157
Any sense organ (FBbt:00005155) that functions in (some) detection of chemical stimulus involved in sensory perception (GO:0050907).[accessedResource: FBbt:00005157][accessDate: 04-11-2010]
TAO:0001149
EMAPA:16542
1a: The part of the face that bears the nostrils and covers the anterior part of the nasal cavity; broadly: this part together with the nasal cavity.nb: The anterior part of the head at the top or end of the muzzle: snout, proboscis.n2. The vertebrate olfactory organ.
FMAID:46472
BTO:0000840
EHDAA:1502
nose structure
EV:0100037
James Malone
nose
olfactory system
Nose[accessedResource: FMAID:46472][accessDate: 04-11-2010]
ZFA:0001149
1a: The part of the face that bears the nostrils and covers the anterior part of the nasal cavity; broadly: this part together with the nasal cavity.nb: The anterior part of the head at the top or end of the muzzle: snout, proboscis.n2. The vertebrate olfactory organ.[accessedResource: BTO:0000840][accessDate: 04-11-2010]
Any sense organ (FBbt:00005155) that functions in (some) detection of chemical stimulus involved in sensory perception (GO:0050907).
chemosensory sensory organ
*Subdivision of face which consists of the nasal skeleton, nasal septum and nasal cavity.
XAO:0000201
MA:0000281
chemosensory sensory organ[accessedResource: FBbt:00005157][accessDate: 04-11-2010]
FMA:22532
Tibialis anterior
Tibialis anterior[accessedResource: FMA:22532][accessDate: 04-11-2010]
tibialis anterior muscle
James Malone
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#International_Unit_of_Biological_Activity
MO_1011
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#IU
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#IU[accessedResource: MO_1011][accessDate: 04-11-2010]
International Unit
James Malone
true
A unit of molarity which is equal to one thousandth of one millionth of a molar or 10^[-9] M.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#nm[accessedResource: MO_862][accessDate: 04-11-2010]
James Malone
Jie Zheng
nM
http://www.ebi.ac.uk/efo/EFO_0001812
MO_862
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#nm
nanomolar
Tomasz Adamusiak
1.5
obsolete - duplication with T cell acute lymphoblastic
leukemia EFO_0000209 use this instead
true
obsolete_precursor T lymphoblastic leukemia
James Malone
James Malone
SAEL:36
BTO:0000408
MA:0000397
epididymus
A system of ductules emerging posteriorly from the testis that holds sperm during maturation and that forms a tangled mass before uniting into a single coiled duct which is continuous with the vas deferens.[accessedResource: BTO:0000408][accessDate: 04-11-2010]
Epididymis
EV:0100103
MAT:0000130
A system of ductules emerging posteriorly from the testis that holds sperm during maturation and that forms a tangled mass before uniting into a single coiled duct which is continuous with the vas deferens.
FMAID:18255
EMAPA:19290
Epididymis[accessedResource: FMAID:18255][accessDate: 04-11-2010]
An assay in which the transcriptome of a biological sample is analysed by reverse transcription PCR (RT-PCR)
transcription profiling by RT-PCR
Anna Farne
CL:0000151
A cell that specializes in controlled release of one or more substances.
A cell that specializes in controlled release of one or more substances.[accessedResource: CL:0000151][accessDate: 04-11-2010]
secretory cell
Tomasz Adamusiak
SW1417
James Malone
Ele Holloway
A thin, transparent tissue divided into the palpebral conjunctiva (covering the inner side of the eye lid) and the bulbar conjunctiva (covering the eyeball).
Conjunctiva[accessedResource: NCIt:C12341][accessDate: 04-11-2010]
A thin, transparent tissue divided into the palpebral conjunctiva (covering the inner side of the eye lid) and the bulbar conjunctiva (covering the eyeball).[accessedResource: NCIt:C12341][accessDate: 04-11-2010]
James Malone
Conjunctiva
conjunctiva structure
NCIt:C12341
Delta(1)-dehydrocortisol
(11beta)-11,17,21-trihydroxypregna-1,4-diene-3,20-dione
CHEBI:8378
InChI=1/C21H28O5/c1-19-7-5-13(23)9-12(19)3-4-14-15-6-8-21(26,17(25)11-22)20(15,2)10-16(24)18(14)19/h5,7,9,14-16,18,22,24,26H,3-4,6,8,10-11H2,1-2H3/t14-,15-,16-,18+,19-,20-,21-/m0/s1
hydroretrocortine
A glucocorticoid that has formula C21H28O5.
1,4-pregnadiene-11beta,17alpha,21-triol-3,20-dione
Delta(1)-dehydrohydrocortisone
11beta,17,21-trihydroxypregna-1,4-diene-3,20-dione
InChIKey=OIGNJSKKLXVSLS-VWUMJDOOBF
[H][C@@]12CCC3=CC(=O)C=C[C@]3(C)[C@@]1([H])[C@@H](O)C[C@@]1(C)[C@@]2([H])CC[C@]1(O)C(=O)CO
C21H28O5
http://www.ebi.ac.uk/efo/EFO_0001595
3,20-dioxo-11beta,17alpha,21-trihydroxy-1,4-pregnadiene
Delta(1)-hydrocortisone
metacortandralone
prednisolone
Calu1
James Malone
Calu-1
Ele Holloway
A broad flat muscle of the calf of the leg lying immediately below the gastrocnemius.
James Malone
soleus
soleus muscle
soleus[accessedResource: BTO:0001265][accessDate: 04-11-2010]
BTO:0001265
A broad flat muscle of the calf of the leg lying immediately below the gastrocnemius.[accessedResource: BTO:0001265][accessDate: 04-11-2010]
ZFS:0000009
blastula 256-cell
James Malone
ZFS:0000029
pharyngula prim-5
James Malone
EV:0100072
MA:0000337
Rectum[accessedResource: FMAID:14544][accessDate: 04-11-2010]
FMAID:14544
mid intestine[accessedResource: MAT:0000047][accessDate: 04-11-2010]
SAEL:96
adult anterior intestine
The terminal region of the mid intestine is comprised of specialized enterocytes that appear to play a role in mucosal immunity.
The part of the intestine that lies between the stomach and colon, consists of duodenum, jejunum, and ileum, secretes digestive enzymes, and is the chief site of the absorption of digested nutrients. The proximal portion of the intestine.
intestinum tenue
BTO:0000651
ZFA:0001323
mid intestine
intestinum tenue[accessedResource: BTO:0000651][accessDate: 04-11-2010]
The terminal region of the mid intestine is comprised of specialized enterocytes that appear to play a role in mucosal immunity.[accessedResource: ZFA:0001323][accessDate: 04-11-2010]
James Malone
Rectum
XAO:0000130
The part of the intestine that lies between the stomach and colon, consists of duodenum, jejunum, and ileum, secretes digestive enzymes, and is the chief site of the absorption of digested nutrients. The proximal portion of the intestine.[accessedResource: BTO:0000651][accessDate: 04-11-2010]
TGMA:0001024
adult anterior intestine[accessedResource: TGMA:0001024][accessDate: 04-11-2010]
The anterior intestine is a rather narrow looped tube of the adult hindgut.
MAT:0000047
anterior intestine
The anterior intestine is a rather narrow looped tube of the adult hindgut.[accessedResource: TGMA:0001024][accessDate: 04-11-2010]
anterior intestine[accessedResource: MAT:0000047][accessDate: 04-11-2010]
small intestine
James Malone
Adenoma of the Liver Cells[accessedResource: NCIt:C3758][accessDate: 04-11-2010]
Liver Cell Adenoma[accessedResource: NCIt:C3758][accessDate: 04-11-2010]
A benign epithelial neoplasm arising from the hepatocytes. Grossly, it appears as a soft, round mass which often contains areas of hemorrhage and necrosis. Morphologically, the neoplastic cells resemble normal hepatocytes and form plates separated by sinusoids. Most patients have a history of contraceptive or anabolic steroids use.
HCA[accessedResource: NCIt:C3758][accessDate: 04-11-2010]
Liver Cell Adenoma
Adenoma of Liver Cells[accessedResource: NCIt:C3758][accessDate: 04-11-2010]
A benign epithelial neoplasm arising from the hepatocytes. Grossly, it appears as a soft, round mass which often contains areas of hemorrhage and necrosis. Morphologically, the neoplastic cells resemble normal hepatocytes and form plates separated by sinusoids. Most patients have a history of contraceptive or anabolic steroids use.[accessedResource: NCIt:C3758][accessDate: 04-11-2010]
Adenoma of Liver Cells
NCIt:C3758
HCA
hepatocellular adenoma
Adenoma of the Liver Cells
http://www.arabidopsis.org/servlets/TairObject?id=1005158929&type=germplasm
CS57905 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158929&type=germplasm
CS57905
James Malone
HCC1395
James Malone
Ele Holloway
MedDRA:10019315
heart transplant rejection
Tomasz Adamusiak
ZEA:0015151
OntologyMappingImporter following MAT:0000224
MAT:0000224
PO:0020148
apical shoot meristem
James Malone
SW1990
James Malone
Ele Holloway
NCI-H748
James Malone
Ele Holloway
James Malone
LHSR is a cell line in which human prostate epithelial cells (PrEC) were infected with amphotropic retroviruses encoding the SV40 large T antigen (L), the telomerase catalytic subunit hTERT (H), the SV40 small T antigen (S) and an oncogenic allele of H-ras (R) to create LHSR cells.
LHSR
InChI=1/C20H15N3O2/c24-19-15-11-17(21-13-7-3-1-4-8-13)18(12-16(15)20(25)23-19)22-14-9-5-2-6-10-14/h1-12,21-22H,(H,23,24,25)/f/h23H
InChIKey=AAALVYBICLMAMA-MPIMZMORCI
DAPH1
5,6-bis(phenylamino)-1H-isoindole-1,3(2H)-dione
CHEBI:53110
Phthalimide substituted at the 4- and 5-positions by anilino groups.
Cgp 52411
James Malone
O=C1NC(=O)c2cc(Nc3ccccc3)c(Nc3ccccc3)cc12
DAPH
4,5-dianilinophthalimide
C20H15N3O2
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0002487
Cockayne Syndrome, Group B[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Cockayne syndrome (disorder)[accessedResource: SNOMEDCT:21086008][accessDate: 04-11-2010]
GeneRIF:12095617
Cockayne Syndrome, Type B
James Malone
Cockayne Syndrome, Type A[accessedResource: MSH:D003057][accessDate: 04-11-2010]
A syndrome characterized by multiple system abnormalities including DWARFISM; PHOTOSENSITIVITY DISORDERS; PREMATURE AGING; and HEARING LOSS. It is caused by mutations of a number of autosomal recessive genes encoding proteins that involve transcriptional-coupled DNA REPAIR processes. Cockayne syndrome is classified by the severity and age of onset. Type I (classical; CSA) is early childhood onset in the second year of life; type II (congenital; CSB) is early onset at birth with severe symptoms; type III (xeroderma pigmentosum; XP) is late childhood onset with mild symptoms.
Group A Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Cockayne's syndrome
Type II Cockayne Syndrome
Caused by mutations of gene CKN1.[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Group B Cockayne Syndrome
Dwarfism-retinal atrophy-deafness syndrome
Cockayne Syndrome, Type III
GeneRIF:12748643
Cockayne Syndrome Type 3
cockayne syndrome
Cockayne syndrome (disorder)
An autosomal recessive syndrome caused by mutations in the ERCC8 and ERCC6 genes. It is characterized by growth and developmental delay, vision and hearing impairment, and impairment of the peripheral nervous system function.
Cokayne syndrome
Cockayne Syndrome, Group A
Cockayne Syndrome, Type A
GeneRIF:11809892
Progeria-Like Syndrome
A simple genetic disease that is caused by a rare autosomal recessive mutations in two DNA excision repair proteins, ERCC-8 and ERCC-6, and characterized by growth failure, impaired development of the nervous system, abnormal sensitivity to sunlight (photosensitivity), and premature aging.[accessedResource: DOID:2962][accessDate: 04-11-2010]
DOID:2962
A simple genetic disease that is caused by a rare autosomal recessive mutations in two DNA excision repair proteins, ERCC-8 and ERCC-6, and characterized by growth failure, impaired development of the nervous system, abnormal sensitivity to sunlight (photosensitivity), and premature aging.
NCIt:C9460
Caused by mutations of gene ERCC6.
Cockayne's syndrome[accessedResource: DOID:2962][accessDate: 04-11-2010]
Progeria-Like Syndromes
Group C Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 04-11-2010]
SNOMEDCT:21086008
Cockayne Syndrome, Group C
Progeria-Like Syndromes[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Cokayne syndrome[accessedResource: DOID:2962][accessDate: 04-11-2010]
Cockayne Syndrome, Type I[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Type C Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Cockayne Syndrome Type 3[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Cockayne Syndrome, Type I
GeneRIF:16246722
Type C is a rare form. Its genetic defect is not clear; appears to be a heterogeneous group. OMIM suggests that Type C should not be used anymore.
An autosomal recessive syndrome caused by mutations in the ERCC8 and ERCC6 genes. It is characterized by growth and developmental delay, vision and hearing impairment, and impairment of the peripheral nervous system function.[accessedResource: NCIt:C9460][accessDate: 04-11-2010]
A syndrome characterized by multiple system abnormalities including DWARFISM; PHOTOSENSITIVITY DISORDERS; PREMATURE AGING; and HEARING LOSS. It is caused by mutations of a number of autosomal recessive genes encoding proteins that involve transcriptional-coupled DNA REPAIR processes. Cockayne syndrome is classified by the severity and age of onset. Type I (classical; CSA) is early childhood onset in the second year of life; type II (congenital; CSB) is early onset at birth with severe symptoms; type III (xeroderma pigmentosum; XP) is late childhood onset with mild symptoms.[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Dwarfism-retinal atrophy-deafness syndrome[accessedResource: SNOMEDCT:21086008][accessDate: 04-11-2010]
GeneRIF:15082767
Syndrome, Progeria-Like[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Type C is a rare form. Its genetic defect is not clear; appears to be a heterogeneous group. OMIM suggests that Type C should not be used anymore.[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Type II Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Type B Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Cockayne Syndrome, Type C
Type III Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 04-11-2010]
MSH:D003057
Caused by mutations of gene CKN1.
Caused by mutations of gene ERCC6.[accessedResource: MSH:D003057][accessDate: 04-11-2010]
intestinal parasitism NOS (disorder)
Parasitic infectious disease of the central nervous system (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitic Diseases
Parasitism, NOS
intestinal parasitism, unspecified[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitosis, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
parasitic infectious disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
A disease by infectious agent that is carried out by parasite which by definition is a pathogen that simultaneously injures and derives sustenance from its host.
parasitic skin disorder[accessedResource: DOID:1398][accessDate: 04-11-2010]
A systemic infectious disease that is carried out by a parasite which by definition is a pathogen that simultaneously injures and derives sustenance from its host.[accessedResource: DOID:1398][accessDate: 04-11-2010]
Disease caused by parasite, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
DOID:1398
intestinal parasitism (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitic endophthalmitis (disorder)
parasitic skin disorder
central nervous system parasitic infectious disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
parasitic skin infectious disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
parasitic lung infectious disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitic endophthalmitis NOS
A successful invasion of a host by an organism that uses the host for food and shelter.
Parasitism
GeneRIF:12045244
Infestation, NOS
Parasite infestation, NOS
Ectoparasitic disease
A systemic infectious disease that is carried out by a parasite which by definition is a pathogen that simultaneously injures and derives sustenance from its host.
parasitic eye infection[accessedResource: DOID:1398][accessDate: 04-11-2010]
parasitic liver infectious disease
Parasitic disease, NOS
Parasite infestation[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Parasitic eye infection (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitosis[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Parasitic infectious disease, NOS
intestinal parasitism, unspecified (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasite infestation, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
intestinal parasitism, unspecified
Parasitic eye infection (disorder)
SNOMEDCT:17322007
Parasitosis
parasitic pregnancy complication
Parasitic infection of lung[accessedResource: DOID:1398][accessDate: 04-11-2010]
parasitic infestation of orbit
Infections or infestations with parasitic organisms. They are often contracted through contact with an intermediate vector, but may occur as the result of direct exposure.
Parasitic infection, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
parasitic gastrointestinal disorder
psorospermiasis
parasitic endophthalmitis[accessedResource: DOID:1398][accessDate: 04-11-2010]
parasitic lung infectious disease
Disease caused by parasite, NOS
parasitic intestinal infectious disease
parasitic infestation of orbit[accessedResource: DOID:1398][accessDate: 04-11-2010]
Disease caused by parasite (disorder)
Disease caused by parasite[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Infestation
parasitic eye infectious disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
Disease caused by parasite (disorder)[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Ectoparasitic disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitism, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Parasitosis, NOS
Parasitic infection of lung
parasitic Infection
Psorospermiasis (disorder)
Parasitic infection of skin[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitic skin infestation (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitism[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Parasitic infestation of orbit (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
parasitic liver disorder[accessedResource: DOID:1398][accessDate: 04-11-2010]
GeneRIF:15471863
parasitic eye infection
animal parasitic infectious disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
parasitic liver disorder
parasitic intestinal infectious disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
James Malone
parasitic eye infectious disease
Parasite infestation
Parasitic infectious disease of the central nervous system (disorder)
parasitemia
parasitic liver infectious disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
parasitic animal
Disease, Parasitic[accessedResource: MSH:D010272][accessDate: 04-11-2010]
intestinal parasitism (disorder)
parasitemia[accessedResource: DOID:1398][accessDate: 04-11-2010]
central nervous system parasitic infectious disease
parasitic infectious disease
Parasitic endophthalmitis NOS (disorder)
MSH:D010272
Parasitic infectious disease, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
parasitic animal[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitic infection of skin
parasitic skin infectious disease
intestinal parasitism NOS (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
Disease caused by parasite
skin Infestation NOS
Parasitic infestation of orbit (disorder)
Parasitic skin infestation (disorder)
Psorospermiasis (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
Infestation, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
parasitic pregnancy complication[accessedResource: DOID:1398][accessDate: 04-11-2010]
A successful invasion of a host by an organism that uses the host for food and shelter.[accessedResource: NCIt:C27864][accessDate: 04-11-2010]
intestinal parasitism, unspecified (disorder)
Parasitic infection, NOS
Parasitic Diseases[accessedResource: MSH:D010272][accessDate: 04-11-2010]
Parasitic endophthalmitis (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
GeneRIF:11444968
skin Infestation NOS[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitic endophthalmitis NOS (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
PARASITIC DIS[accessedResource: MSH:D010272][accessDate: 04-11-2010]
parasitic gastrointestinal disorder[accessedResource: DOID:1398][accessDate: 04-11-2010]
psorospermiasis[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitic endophthalmitis NOS[accessedResource: DOID:1398][accessDate: 04-11-2010]
animal parasitic infectious disease
NCIt:C27864
PARASITIC DIS
parasitic endophthalmitis
Parasitic disease, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Infestation[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Infections or infestations with parasitic organisms. They are often contracted through contact with an intermediate vector, but may occur as the result of direct exposure.[accessedResource: MSH:D010272][accessDate: 04-11-2010]
Disease, Parasitic
ZFS:0000036
larval day 4
James Malone
XAO:0003196
FMA:7190
TAO:0001149
olfactory system
chemosensory sensory organ
MA:0002445
ZFA:0001149
MDAMB436
James Malone
Ewing Family of Tumors
A malignant tumor of the bone which always arises in the medullary tissue, occurring more often in cylindrical bones. There are conspicuous foci of necrosis in association with irregular masses of small, regular, rounded or ovoid cells with very scanty cytoplasm. The tumor occurs usually before the age of 20, about twice as frequently in males as in females. (From Dorland, 27th ed; Stedman, 25th ed)[accessedResource: MSH:D012512][accessDate: 10-05-2010]
ES[accessedResource: NCIt:C4817][accessDate: 10-05-2010]
duplicate of EFO_0000174 Ewing's sarcoma
GeneRIF:14977835
Sarcoma, Ewing
A malignant tumor of the bone which always arises in the medullary tissue, occurring more often in cylindrical bones. There are conspicuous foci of necrosis in association with irregular masses of small, regular, rounded or ovoid cells with very scanty cytoplasm. The tumor occurs usually before the age of 20, about twice as frequently in males as in females. (From Dorland, 27th ed; Stedman, 25th ed)
Ewing's sarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:76909002][accessDate: 10-05-2010]
MSH:D012512
Ewing's Family of Tumors
GeneRIF:12700668
Ewing's Sarcoma/Peripheral Primitive Neuroectodermal Tumor[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
GeneRIF:11956622
Ewing Sarcoma/Peripheral Primitive Neuroectodermal Tumor
Ewing's Family of Tumors[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
ES
GeneRIF:11313995
Ewings Tumor
Ewing Tumor[accessedResource: MSH:D012512][accessDate: 10-05-2010]
Ewing's Sarcoma/Peripheral Primitive Neuroectodermal Tumor
GeneRIF:15919668
GeneRIF:15328192
NCIt:C27291
GeneRIF:15581626
GeneRIF:14528100
GeneRIF:15748890
Ewing Family of Tumors[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
GeneRIF:12447693
GeneRIF:12557222
Ewing's tumour
A small round cell tumor that lacks morphologic, immunohistochemical, and electron microscopic evidence of neuroectodermal differentiation. It represents one of the two ends of the spectrum called Ewing's sarcoma/peripheral neuroectodermal tumor. It affects mostly males under age 20, and it can occur in soft tissue or bone. Pain and the presence of a mass are the most common clinical symptoms.[accessedResource: NCIt:C4817][accessDate: 10-05-2010]
Tumor, Ewing's[accessedResource: MSH:D012512][accessDate: 10-05-2010]
true
GeneRIF:11992404
GeneRIF:12172985
GeneRIF:12527902
Sarcoma, Ewing[accessedResource: MSH:D012512][accessDate: 10-05-2010]
Tumors of the Ewing's Family
obsolete_Ewing family tumor
Ewing's Family of Tumours
NCIt:C4817
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms.
Ewing Tumor
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms.[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
GeneRIF:12054564
GeneRIF:15044653
DOID:3369
GeneRIF:15282325
SNOMEDCT:76909002
Ewing's sarcoma
A small round cell tumor that lacks morphologic, immunohistochemical, and electron microscopic evidence of neuroectodermal differentiation. It represents one of the two ends of the spectrum called Ewing's sarcoma/peripheral neuroectodermal tumor. It affects mostly males under age 20, and it can occur in soft tissue or bone. Pain and the presence of a mass are the most common clinical symptoms.
Tumors of the Ewing's Family[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
Ewing Sarcoma/Peripheral Primitive Neuroectodermal Tumor[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
Ewing's Family of Tumours[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
GeneRIF:15273724
Ewing's sarcoma (morphologic abnormality)
Ewings sarcoma[accessedResource: DOID:3369][accessDate: 10-05-2010]
1.8
GeneRIF:15310753
Ewing's tumour[accessedResource: SNOMEDCT:76909002][accessDate: 10-05-2010]
GeneRIF:15077162
James Malone
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms. -- 2004
MA:0000663
AAO:0000222
hindlimb muscle
James Malone
3T3-L1
James Malone
NCIt:C12731
The upper arm bone between the shoulder and elbow.
The upper arm bone between the shoulder and elbow.[accessedResource: NCIt:C12731][accessDate: 04-11-2010]
humerus
James Malone
Anthrax (disorder)
Other specified manifestations of anthrax
Other specified anthrax manifestations
Charbon[accessedResource: SNOMEDCT:409498004][accessDate: 04-11-2010]
SNOMEDCT:186303000
Milzbrand[accessedResource: SNOMEDCT:409498004][accessDate: 04-11-2010]
Anthrax, unspecified
DOID:7427
Other specified anthrax manifestations (disorder)
ANTHRAX NOS[accessedResource: ICD9:022.9][accessDate: 04-11-2010]
GeneRIF:16194238
GeneRIF:15569923
Infection due to Bacillus anthracis
Other specified anthrax manifestations (disorder)[accessedResource: SNOMEDCT:186303000][accessDate: 04-11-2010]
Anthrax NOS
[X]Anthrax, unspecified (disorder)
GeneRIF:16239556
OTHER ANTHRAX MANIFEST
Other specified manifestations of anthrax[accessedResource: ICD9:022.8][accessDate: 04-11-2010]
A Bacillaceae infectious disease that results_in infection located_in skin, located_in lung or located_in gastrointestinal tract, has_agent Bacillus anthracis, transmitted_by contact with infected animals or animal products, transmitted_by airborne spores or transmitted_by ingestion of undercooked meat from infected animals and has_symptom skin ulcer, has_symptom nausea, has_symptom poor appetite, has_symptom bloody diarrhea, has_symptom fever or has_symptom shortness of breath.
James Malone
ICD9:022
ICD9:022.8
[X]Anthrax, unspecified
Infection due to Bacillus anthracis[accessedResource: SNOMEDCT:409498004][accessDate: 04-11-2010]
Splenic fever
anthrax disease
SNOMEDCT:186304006
anthrax
Charbon
anthrax disease[accessedResource: DOID:7427][accessDate: 04-11-2010]
A Bacillaceae infectious disease that results_in infection located_in skin, located_in lung or located_in gastrointestinal tract, has_agent Bacillus anthracis, transmitted_by contact with infected animals or animal products, transmitted_by airborne spores or transmitted_by ingestion of undercooked meat from infected animals and has_symptom skin ulcer, has_symptom nausea, has_symptom poor appetite, has_symptom bloody diarrhea, has_symptom fever or has_symptom shortness of breath.[accessedResource: DOID:7427][accessDate: 04-11-2010]
[X]Anthrax, unspecified (disorder)[accessedResource: SNOMEDCT:187302001][accessDate: 04-11-2010]
Milzbrand
OTHER ANTHRAX MANIFEST[accessedResource: ICD9:022.8][accessDate: 04-11-2010]
Anthrax (disorder)[accessedResource: SNOMEDCT:409498004][accessDate: 04-11-2010]
[X]Anthrax, unspecified[accessedResource: SNOMEDCT:187302001][accessDate: 04-11-2010]
Anthrax NOS (disorder)
GeneRIF:15689409
Other specified anthrax manifestations[accessedResource: SNOMEDCT:186303000][accessDate: 04-11-2010]
Splenic fever[accessedResource: SNOMEDCT:409498004][accessDate: 04-11-2010]
Anthrax, unspecified[accessedResource: ICD9:022.9][accessDate: 04-11-2010]
Anthrax NOS (disorder)[accessedResource: SNOMEDCT:186304006][accessDate: 04-11-2010]
SNOMEDCT:409498004
SNOMEDCT:187302001
ICD9:022.9
SW1088
James Malone
Ele Holloway
FBbt:00005611
adult foregut precursor
James Malone
UMC11
James Malone
Ele Holloway
OntologyMappingImporter following MAT:0000277
axial fin skeleton
median fin skeleton
unpaired fin skeleton
James Malone
MAT:0000277
ZFA:0001123
axial fin skeleton[accessedResource: ZFA:0001123][accessDate: 04-11-2010]
unpaired fin skeleton[accessedResource: ZFA:0001123][accessDate: 04-11-2010]
wikipedia:http://en.wikipedia.org/wiki/Basal-like_carcinoma
basal breast tumor is a high grade, triple-negative breast tumor, i.e. they express no estrogen receptor, progesterone receptor nor Her2/neu proteins.
basal-like carcinoma
Tomasz Adamusiak
James Malone
2.2
true
obsolete_SKNAS
James Malone
Ele Holloway
duplicate of EFO_0002859
CORL88
James Malone
Ele Holloway
RKOE6
James Malone
Ele Holloway
EVM:2990005
blastoderm stage
XAO:1000003
WBIs:0000005
blastula embryo
blastula stage
FBdv:00005304
James Malone
A human cell line derived from a pediatric patient initially classified as Wilm's tumor, reclassified as deriving from a rhabdoid tumor of the kidney
G-401
James Malone
G401
Ele Holloway
MAT:0000356
tepal
PO:0009033
BTO:0001728
GRO:0005131[accessedResource: BTO:0001728][accessDate: 04-11-2010]
A division of the perianth of a flower having a virtually indistinguishable calyx and corolla, as in tulips and lilies.
A division of the perianth of a flower having a virtually indistinguishable calyx and corolla, as in tulips and lilies.[accessedResource: BTO:0001728][accessDate: 04-11-2010]
James Malone
GRO:0005131
GeneRIF:16267761
MSH:D003586
CMV - Cytomegalovirus infection
Cytomegaloviral disease, unspecified[accessedResource: DOID:11259][accessDate: 04-11-2010]
Cytomagalovirus infection
INCLUSION DIS[accessedResource: MSH:D003586][accessDate: 04-11-2010]
Cytomegaloviral disease, unspecified (disorder)[accessedResource: DOID:11259][accessDate: 04-11-2010]
[X]Cytomegaloviral disease, unspecified
GeneRIF:14962896
SALIVARY GLAND VIRUS DIS
Cytomegalovirus infectious disease
GeneRIF:12370359
GeneRIF:15528370
James Malone
Disease, Cytomegalic Inclusion[accessedResource: MSH:D003586][accessDate: 04-11-2010]
Salivary gland virus disease
CYTOMEGALOVIRAL DISEASE[accessedResource: ICD9:078.5][accessDate: 04-11-2010]
GeneRIF:14990723
INFECT CYTOMEGALOVIRUS
CYTOMEGALIC INCLUSION DIS[accessedResource: MSH:D003586][accessDate: 04-11-2010]
CMV - Cytomegalovirus infection[accessedResource: SNOMEDCT:28944009][accessDate: 04-11-2010]
INCLUSION DIS
Cytomegaloviral disease, unspecified (disorder)
GeneRIF:15452223
DOID:11259
Cytomegalovirus Infection
[X]Cytomegaloviral disease, unspecified[accessedResource: SNOMEDCT:187456009][accessDate: 04-11-2010]
Infection with CYTOMEGALOVIRUS, characterized by enlarged cells bearing intranuclear inclusions. Infection may be in almost any organ, but the salivary glands are the most common site in children, as are the lungs in adults.
ICD9:078.5
Cytomegalovirus infection, NOS[accessedResource: SNOMEDCT:28944009][accessDate: 04-11-2010]
GeneRIF:15021824
Cytomegalovirus infection (disorder)
GeneRIF:15890971
Infection with CYTOMEGALOVIRUS, characterized by enlarged cells bearing intranuclear inclusions. Infection may be in almost any organ, but the salivary glands are the most common site in children, as are the lungs in adults.[accessedResource: MSH:D003586][accessDate: 04-11-2010]
Cytomagalovirus infection[accessedResource: DOID:11259][accessDate: 04-11-2010]
Cytomegaloviral disease, unspecified
Human Herpesvirus 5
Cytomegalovirus infection (disorder)[accessedResource: SNOMEDCT:28944009][accessDate: 04-11-2010]
Cytomegalic Inclusion Diseases[accessedResource: MSH:D003586][accessDate: 04-11-2010]
Inclusion Diseases
GeneRIF:12388817
Inclusion Diseases[accessedResource: MSH:D003586][accessDate: 04-11-2010]
GeneRIF:12478407
Infections, Cytomegalovirus[accessedResource: MSH:D003586][accessDate: 04-11-2010]
SALIVARY GLAND VIRUS DIS[accessedResource: MSH:D003586][accessDate: 04-11-2010]
GeneRIF:15194307
Disease due to Cytomegalovirus
Disease, Cytomegalic Inclusion
Inclusion Diseases, Cytomegalic
[X]Cytomegaloviral disease, unspecified (disorder)
Salivary Gland Virus Disease[accessedResource: MSH:D003586][accessDate: 04-11-2010]
Cytomegalovirus Infections
Cytomegalovirus infection[accessedResource: SNOMEDCT:28944009][accessDate: 04-11-2010]
Inclusion Disease
Cytomegalovirus infection, NOS
CYTOMEGALOVIRAL DISEASE
SNOMEDCT:187456009
INFECT CYTOMEGALOVIRUS[accessedResource: MSH:D003586][accessDate: 04-11-2010]
cytomegalovirus
Disease due to Cytomegalovirus[accessedResource: SNOMEDCT:28944009][accessDate: 04-11-2010]
GeneRIF:14993594
Cytomegalovirus infectious disease[accessedResource: DOID:11259][accessDate: 04-11-2010]
HCMV
SNOMEDCT:28944009
[X]Cytomegaloviral disease, unspecified (disorder)[accessedResource: SNOMEDCT:187456009][accessDate: 04-11-2010]
CYTOMEGALIC INCLUSION DIS
Inclusion Disease[accessedResource: MSH:D003586][accessDate: 04-11-2010]
GeneRIF:16272328
GeneRIF:12466474
James Malone
Ele Holloway
Hep-3B
Hep3B
NIFSTD:birnlex_2085
MO_601
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#institution
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#institution[accessedResource: MO_601][accessDate: 04-11-2010]
institution
Tomasz Adamusiak
growth assay
cell proliferation assay
A population growth assay is an assay that measures the multiplication or reproduction of cells, resulting in the rapid expansion of a cell population.
population growth assay
James Malone
Flora Logan
ZFA:0000669
MAT:0000084
kidney marrow
CL:0002092
The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis. Davidson and Zon 2004.
The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis. Davidson and Zon 2004.[accessedResource: TAO:0000669][accessDate: 04-11-2010]
A cell found in the bone marrow. This can include fibroblasts, macrophages, adipocytes, osteoblasts, osteoclasts, endothelial cells and hematopoietic cells.
Medulla ossea[accessedResource: FMAID:9608][accessDate: 04-11-2010]
TAO:0000669
Medulla ossea
bone marrow cell[accessedResource: BTO:0000141][accessDate: 04-11-2010]
The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis.
Tomasz Adamusiak
medulla ossium[accessedResource: BTO:0000141][accessDate: 04-11-2010]
bone marrow
anterior kidney[accessedResource: ZFA:0000669][accessDate: 04-11-2010]
XAO:0000123
head kidney[accessedResource: MAT:0000084][accessDate: 04-11-2010]
The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis.[accessedResource: ZFA:0000669][accessDate: 04-11-2010]
James Malone
EV:0100046
bone marrow cell
The soft, fatty, vascular tissue that fills most bone cavities and is the source of red blood cells and many white blood cells.[accessedResource: BTO:0000141][accessDate: 04-11-2010]
anterior kidney
kidney marrow[accessedResource: ZFA:0000669][accessDate: 04-11-2010]
The soft, fatty, vascular tissue that fills most bone cavities and is the source of red blood cells and many white blood cells.
FMAID:9608
SAEL:11
A cell found in the bone marrow. This can include fibroblasts, macrophages, adipocytes, osteoblasts, osteoclasts, endothelial cells and hematopoietic cells.[accessedResource: CL:0002092][accessDate: 04-11-2010]
head kidney
medulla ossium
BTO:0000141
MA:0000134
GeneRIF:12115687
NIFSTD:birnlex_12733
Temporal Lobe Epilepsies[accessedResource: MSH:D004833][accessDate: 04-11-2010]
Epilepsies, Temporal Lobe
GeneRIF:12601092
Lateral Temporal Epilepsies
James Malone
Epilepsy, Uncinate
DOID:3328
A localization-related (focal) form of epilepsy characterized by recurrent seizures that arise from foci within the temporal lobe, most commonly from its mesial aspect. A wide variety of psychic phenomena may be associated, including illusions, hallucinations, dyscognitive states, and affective experiences. The majority of complex partial seizures (see EPILEPSY, COMPLEX PARTIAL) originate from the temporal lobes. Temporal lobe seizures may be classified by etiology as cryptogenic, familial, or symptomatic (i.e., related to an identified disease process or lesion). (From Adams et al., Principles of Neurology, 6th ed, p321)[accessedResource: MSH:D004833][accessDate: 04-11-2010]
Temporal lobe epilepsy (disorder)[accessedResource: DOID:3328][accessDate: 04-11-2010]
A localization-related (focal) form of epilepsy characterized by recurrent seizures that arise from foci within the temporal lobe, most commonly from its mesial aspect. A wide variety of psychic phenomena may be associated, including illusions, hallucinations, dyscognitive states, and affective experiences. The majority of complex partial seizures (see EPILEPSY, COMPLEX PARTIAL) originate from the temporal lobes. Temporal lobe seizures may be classified by etiology as cryptogenic, familial, or symptomatic (i.e., related to an identified disease process or lesion). (From Adams et al., Principles of Neurology, 6th ed, p321)
Temporal lobe epilepsy (disorder) [Ambiguous][accessedResource: DOID:3328][accessDate: 04-11-2010]
Epilepsy, Lateral Temporal[accessedResource: MSH:D004833][accessDate: 04-11-2010]
GeneRIF:15672539
A localization-related (focal) form of epilepsy characterized by recurrent seizures that arise from foci within the temporal lobe, most commonly from its mesial aspect. A wide variety of psychic phenomena may be associated, including illusions, hallucinations, dyscognitive states, and affective experiences. The majority of complex partial seizures (see EPILEPSY, COMPLEX PARTIAL) originate from the temporal lobes. Temporal lobe seizures may be classified by etiology as cryptogenic, familial, or symptomatic (i.e., related to an identified disease process or lesion) (MeSH).[accessedResource: NIFSTD:birnlex_12733][accessDate: 04-11-2010]
GeneRIF:15246112
Uncinate Epilepsies[accessedResource: MSH:D004833][accessDate: 04-11-2010]
GeneRIF:15111672
GeneRIF:15452305
GeneRIF:12686399
temporal lobe epilepsy
Psychomotor seizure[accessedResource: SNOMEDCT:193000002][accessDate: 04-11-2010]
TLE - Temporal lobe epilepsy
GeneRIF:15193619
GeneRIF:15079010
MSH:D004833
SNOMEDCT:193000002
GeneRIF:15245492
GeneRIF:15716416
Lateral Temporal Epilepsies[accessedResource: MSH:D004833][accessDate: 04-11-2010]
GeneRIF:14503638
Epilepsy, Lateral Temporal
Uncinate Epilepsy[accessedResource: NIFSTD:birnlex_12733][accessDate: 04-11-2010]
GeneRIF:11951051
GeneRIF:15048887
GeneRIF:16095760
GeneRIF:14510824
GeneRIF:14643764
GeneRIF:12470703
Temporal lobe epilepsy (disorder)
GeneRIF:16254490
GeneRIF:15799783
GeneRIF:14625043
Childhood Benign Psychomotor Epilepsy
GeneRIF:12122039
Childhood Benign Psychomotor Epilepsy[accessedResource: MSH:D004833][accessDate: 04-11-2010]
TLE - Temporal lobe epilepsy[accessedResource: SNOMEDCT:193000002][accessDate: 04-11-2010]
A localization-related (focal) form of epilepsy characterized by recurrent seizures that arise from foci within the temporal lobe, most commonly from its mesial aspect. A wide variety of psychic phenomena may be associated, including illusions, hallucinations, dyscognitive states, and affective experiences. The majority of complex partial seizures (see EPILEPSY, COMPLEX PARTIAL) originate from the temporal lobes. Temporal lobe seizures may be classified by etiology as cryptogenic, familial, or symptomatic (i.e., related to an identified disease process or lesion) (MeSH).
GeneRIF:12205652
Psychomotor seizure
Tomasz Adamusiak
GeneRIF:15592755
Epilepsies, Uncinate
GeneRIF:15145077
Temporal lobe epilepsy (disorder) [Ambiguous]
F9
Ele Holloway
Mouse cell line
F9 mouse embryonal carcinoma cell line
James Malone
InChI=1/C5H11NO2S/c1-5(2,9)3(6)4(7)8/h3,9H,6H2,1-2H3,(H,7,8)/t3-/m0/s1/f/h7H
InChIKey=VVNCNSJFMMFHPL-GFBCBKCJDA
C5H11NO2S
Cuprimine
penicillaminum
(S)-2-amino-3-mercapto-3-methylbutanoic acid
(2S)-2-amino-3-methyl-3-sulfanylbutanoic acid
3-sulfanyl-D-valine
(-)-penicillamine
3-mercapto-D-valine
D-beta,beta-dimethylcysteine
Depen
PA
(S)-3,3-dimethylcysteine
D-Penamine
CHEBI:7959
Tomasz Adamusiak
A trisubstituted carboxylic acid with amino, methyl and sulfanyl substituents. Pharmaceutical form (L-form is toxic) of chelating agent used to treat heavy metal poisoning.
Ele Holloway
penicilamina
http://www.ebi.ac.uk/efo/EFO_0002726
D-penicillamine
CC(C)(S)[C@@H](N)C(O)=O
AntP1
antennal primordium[accessedResource: FBbt:00005510][accessDate: 04-11-2010]
antennal primordium2[accessedResource: FBbt:00005510][accessDate: 04-11-2010]
FBbt:00005510
antennal primordium
antennal primordium1
.
AntP2
.[accessedResource: FBbt:00005510][accessDate: 04-11-2010]
antennal primordium2
P3 AntOrg[accessedResource: FBbt:00005510][accessDate: 04-11-2010]
James Malone
P3 AntOrg
AntP1[accessedResource: FBbt:00005510][accessDate: 04-11-2010]
AntP2[accessedResource: FBbt:00005510][accessDate: 04-11-2010]
GM12717
James Malone
double-positive, alpha-beta thymocyte[accessedResource: CL:0000809][accessDate: 04-11-2010]
A thymocyte expressing the alpha-beta T cell receptor complex as well as both the CD4 and CD8 coreceptors.[accessedResource: CL:0000809][accessDate: 04-11-2010]
double-positive, alpha-beta immature T lymphocyte[accessedResource: CL:0000809][accessDate: 04-11-2010]
CL:0000809
nontransformed thymocyte
DP cell
double-positive, alpha-beta thymocyte
DP thymocyte
A thymocyte expressing the alpha-beta T cell receptor complex as well as both the CD4 and CD8 coreceptors.
James Malone
double-positive, alpha-beta immature T lymphocyte
DP cell[accessedResource: CL:0000809][accessDate: 04-11-2010]
InChI=1/C18H24O2/c1-18-9-8-14-13-5-3-12(19)10-11(13)2-4-15(14)16(18)6-7-17(18)20/h3,5,10,14-17,19-20H,2,4,6-9H2,1H3/t14-,15-,16+,17-,18+/m1/s1
http://www.ebi.ac.uk/efo/EFO_0001467
InChIKey=VOXZDWNPVJITMN-SFFUCWETBJ
estra-1,3,5(10)-triene-3,17alpha-diol
C18H24O2
17alpha-estradiol
[H][C@]12CC[C@]3(C)[C@H](O)CC[C@@]3([H])[C@]1([H])CCc1cc(O)ccc21
An estradiol that has formula C18H24O2.
alpha-estradiol
estra-1,3,5(10)trien-3,17alpha-diol
CHEBI:17160
MAT:0000001
animal component
James Malone
A SKBR3 is a cell line.
A SKBR3 is all of the following: something that is bearer of a breast carcinoma, something that derives from
an epithelial cell, and something that derives from a mammary gland.
Natural Language Generator 8th April 2010
SKBR3
James Malone
MAT:0000495
XAO:0000166
Medulla of suprarenal gland
EMAPA:18428
The inner, reddish-brown portion of the adrenal glands that synthesizes, stores, and releases epinephrine and norepinephrine.
Suprarenal medulla[accessedResource: FMAID:15633][accessDate: 04-11-2010]
EV:0100135
MA:0000119
The inner, reddish-brown portion of the adrenal glands that synthesizes, stores, and releases epinephrine and norepinephrine.[accessedResource: BTO:0000049][accessDate: 04-11-2010]
FMAID:15633
Medulla of adrenal gland
Suprarenal medulla
BTO:0000049
Medulla (Glandula suprarenalis)
Medulla (Glandula suprarenalis)[accessedResource: FMAID:15633][accessDate: 04-11-2010]
Medulla of adrenal gland[accessedResource: FMAID:15633][accessDate: 04-11-2010]
adrenal medulla
Medulla of suprarenal gland[accessedResource: FMAID:15633][accessDate: 04-11-2010]
James Malone
ZEA:0015084
PO:0020126
female inflorescence
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158568&type=germplasm
CS57544 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158568&type=germplasm
CS57544
James Malone
Oligodendroglioma, anaplastic (morphologic abnormality)
Oligodendroglioma, anaplastic (morphologic abnormality)[accessedResource: DOID:7154][accessDate: 04-11-2010]
Undifferentiated Oligodendroglioma[accessedResource: DOID:7154][accessDate: 04-11-2010]
Undifferentiated Oligodendroglioma
James Malone
anaplastic oligodendroglioma
DOID:7154
Ele Holloway
Midborderline leprosy (disorder)[accessedResource: DOID:1023][accessDate: 04-11-2010]
Leprosy, Dimorphous
DOID:1023
Borderline or dimorphous leprosy
ICD9:030.3
Midborderline leprosy (disorder)
Midborderline leprosy[accessedResource: SNOMEDCT:400154003][accessDate: 04-11-2010]
Type BB leprosy
A form of LEPROSY in which there are clinical manifestations of both principal types (lepromatous and tuberculoid). The disease may shift toward one of these two polar or principal forms.
Borderline or dimorphous leprosy[accessedResource: DOID:1023][accessDate: 04-11-2010]
James Malone
Type BB leprosy[accessedResource: SNOMEDCT:400154003][accessDate: 04-11-2010]
Dimorphous Leprosy[accessedResource: MSH:D015439][accessDate: 04-11-2010]
SNOMEDCT:400154003
Borderline leprosy [group B][accessedResource: DOID:1023][accessDate: 04-11-2010]
Borderline leprosy [group B]
Dimorphous Leprosies[accessedResource: MSH:D015439][accessDate: 04-11-2010]
SNOMEDCT:400008009
Leprosies, Borderline[accessedResource: MSH:D015439][accessDate: 04-11-2010]
A form of LEPROSY in which there are clinical manifestations of both principal types (lepromatous and tuberculoid). The disease may shift toward one of these two polar or principal forms.[accessedResource: MSH:D015439][accessDate: 04-11-2010]
Group B leprosy[accessedResource: SNOMEDCT:400008009][accessDate: 04-11-2010]
BB - Borderline leprosy[accessedResource: SNOMEDCT:400154003][accessDate: 04-11-2010]
borderline leprosy
Borderline leprosy (disorder)[accessedResource: DOID:1023][accessDate: 04-11-2010]
Borderline leprosy (disorder)
Leprosies, Borderline
Midborderline leprosy
Group B leprosy
BB - Borderline leprosy
MSH:D015439
Leprosies, Dimorphous
A heart component is an animal component that is part of some heart.
heart component
James Malone
ZFA:0000003
adaxial cell
adaxial cell[accessedResource: ZFA:0000003][accessDate: 04-11-2010]
adaxial cells
James Malone
InChIKey=XYNPYHXGMWJBLV-VXPJTDKGBR
(3beta,5alpha,22beta,25S)-spirosolan-3-ol
5alpha-tomatidan-3beta-ol
(22S,25S)-5alpha-spirosolan-3beta-ol
Tomatidin
C27H45NO2
http://www.ebi.ac.uk/efo/EFO_0001627
[H][C@@]12CC[C@]3([H])[C@]([H])(CC[C@@]4(C)[C@@]3([H])C[C@]3([H])O[C@@]5(CC[C@H](C)CN5)[C@@H](C)[C@]43[H])[C@@]1(C)CC[C@H](O)C2
InChI=1/C27H45NO2/c1-16-7-12-27(28-15-16)17(2)24-23(30-27)14-22-20-6-5-18-13-19(29)8-10-25(18,3)21(20)9-11-26(22,24)4/h16-24,28-29H,5-15H2,1-4H3/t16-,17-,18-,19-,20+,21-,22-,23-,24-,25-,26-,27-/m0/s1
tomatidine
CHEBI:9629
event free survival time
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#disease_staging[accessedResource: MO_792][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
James Malone
The stage or progression of a disease in an organism. Includes pathological staging of cancers and other disease progression. E.g. Dukes C stage describing colon cancer
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#disease_staging
disease staging
Dukes C stage describing colon cancer
MO_792
3beta-hydroxy-20-oxopregn-5-ene-16alpha-carbonitrile
A nitrile that has formula C22H31NO2.
PCN
3beta-hydroxy-20-oxo-5-pregnene-16alpha-carbonitrile
[H][C@@]12CC=C3C[C@@H](O)CC[C@]3(C)[C@@]1([H])CC[C@]1(C)[C@H]([C@@H](C[C@@]21[H])C#N)C(C)=O
CHEBI:35591
http://www.ebi.ac.uk/efo/EFO_0001596
InChI=1/C22H31NO2/c1-13(24)20-14(12-23)10-19-17-5-4-15-11-16(25)6-8-21(15,2)18(17)7-9-22(19,20)3/h4,14,16-20,25H,5-11H2,1-3H3/t14-,16-,17+,18-,19-,20-,21-,22-/m0/s1
C22H31NO2
pregnenolone 16alpha-carbonitrile
InChIKey=VSBHRRMYCDQLJF-ZDNYCOCVBP
pregnenolone carbonitrile
Optic Nerve Head
Optic Papilla
James Malone
Optic Disk[accessedResource: NCIt:C12760][accessDate: 04-11-2010]
NCIt:C12760
A portion of the retina at which the axons of the ganglion cells exit the eyeball to form the optic nerve. No light-sensitive photoreceptors are contained within this portion of the retina.[accessedResource: NCIt:C12760][accessDate: 04-11-2010]
Optic Papilla[accessedResource: NCIt:C12760][accessDate: 04-11-2010]
optic disc
Optic Nerve Head[accessedResource: NCIt:C12760][accessDate: 04-11-2010]
FMA:58634
A portion of the retina at which the axons of the ganglion cells exit the eyeball to form the optic nerve. No light-sensitive photoreceptors are contained within this portion of the retina.
Optic Disk
liver endoderm
Tomasz Adamusiak
Jie Zheng
Lymphomas Non-Hodgkin's B-Cell[accessedResource: C3457][accessDate: 04-11-2010]
Lymphomas Non-Hodgkin's B-Cell
B-Cell Non-Hodgkin Lymphoma
The most common type of non-Hodgkin lymphoma. It includes the most frequently seen morphologic variants which are: diffuse large B-cell lymphoma, follicular lymphoma, small lymphocytic lymphoma and marginal zone B-cell lymphoma. -- 2003[accessedResource: C3457][accessDate: 04-11-2010]
peripheral B-cell neoplasm
B-Cell Non-Hodgkin's Lymphoma
C3457
The most common type of non-Hodgkin lymphoma. It includes the most frequently seen morphologic variants which are: diffuse large B-cell lymphoma, follicular lymphoma, small lymphocytic lymphoma and marginal zone B-cell lymphoma. -- 2003
B-Cell Non-Hodgkin Lymphoma[accessedResource: C3457][accessDate: 04-11-2010]
B-cell lymphoma
B-Cell Non Hodgkin's Lymphoma[accessedResource: C3457][accessDate: 04-11-2010]
neoplasm of mature B-cells
James Malone
Marginal gyrus[accessedResource: FMA:61857][accessDate: 04-11-2010]
FMA:61857
James Malone
superior frontal gyrus
Marginal gyrus
Superior frontal convolution[accessedResource: FMA:61857][accessDate: 04-11-2010]
Superior frontal convolution
DMS 114
DMS114
James Malone
Ele Holloway
MDAMB134VI
James Malone
Ele Holloway
ciprofibrato
http://www.ebi.ac.uk/efo/EFO_0002404
A ring assembly that has formula C13H14Cl2O3.
CHEBI:50867
2-[4-(2,2-dichlorocyclopropyl)phenoxy]-2-methylpropanoic acid
ciprofibratum
InChIKey=KPSRODZRAIWAKH-WYUMXYHSCN
InChI=1/C13H14Cl2O3/c1-12(2,11(16)17)18-9-5-3-8(4-6-9)10-7-13(10,14)15/h3-6,10H,7H2,1-2H3,(H,16,17)/f/h16H
C13H14Cl2O3
ciprofibrate
James Malone
CC(C)(Oc1ccc(cc1)C2CC2(Cl)Cl)C(O)=O
NIFSTD:birnlex_516
Human
http://www.ebi.ac.uk/efo/EFO_0001994
Human[accessedResource: NIFSTD:birnlex_516][accessDate: 04-11-2010]
Homo sapiens
Tomasz Adamusiak
James Malone
Cell lines used in experiments under the HapMap Project
HapMap cell lines
Acinic Cell Adenocarcinoma[accessedResource: NCIt:C3768][accessDate: 04-11-2010]
acinar cell carcinoma
GeneRIF:11891193
Acinic Cell Carcinoma
MSH:D018267
Acinar Cell Adenocarcinoma[accessedResource: NCIt:C3768][accessDate: 04-11-2010]
DOID:3025
Carcinomas, Acinar Cell[accessedResource: MSH:D018267][accessDate: 04-11-2010]
Acinar Cell Carcinomas
A malignant glandular epithelial neoplasm consisting of secretory cells forming acinar patterns. Representative examples include the acinar cell carcinoma of the pancreas and the acinar adenocarcinoma of the prostate gland.
Acinar cell carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:45410002][accessDate: 04-11-2010]
James Malone
Acinar Adenocarcinoma
Acinar Cell Adenocarcinoma
A malignant tumor arising from secreting cells of a racemose gland, particularly the salivary glands. Racemose (Latin racemosus, full of clusters) refers, as does acinar (Latin acinus, grape), to small saclike dilatations in various glands. Acinar cell carcinomas are usually well differentiated and account for about 13% of the cancers arising in the parotid gland. Lymph node metastasis occurs in about 16% of cases. Local recurrences and distant metastases many years after treatment are common. This tumor appears in all age groups and is most common in women. (Stedman, 25th ed; Holland et al., Cancer Medicine, 3d ed, p1240; from DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p575)[accessedResource: MSH:D018267][accessDate: 04-11-2010]
SNOMEDCT:45410002
Acinic Cell Carcinoma[accessedResource: NCIt:C3768][accessDate: 04-11-2010]
Acinar adenocarcinoma[accessedResource: SNOMEDCT:45410002][accessDate: 04-11-2010]
Acinic Cell Adenocarcinoma
A malignant glandular epithelial neoplasm consisting of secretory cells forming acinar patterns. Representative examples include the acinar cell carcinoma of the pancreas and the acinar adenocarcinoma of the prostate gland.[accessedResource: NCIt:C3768][accessDate: 04-11-2010]
A malignant tumor arising from secreting cells of a racemose gland, particularly the salivary glands. Racemose (Latin racemosus, full of clusters) refers, as does acinar (Latin acinus, grape), to small saclike dilatations in various glands. Acinar cell carcinomas are usually well differentiated and account for about 13% of the cancers arising in the parotid gland. Lymph node metastasis occurs in about 16% of cases. Local recurrences and distant metastases many years after treatment are common. This tumor appears in all age groups and is most common in women. (Stedman, 25th ed; Holland et al., Cancer Medicine, 3d ed, p1240; from DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p575)
Acinar Carcinoma[accessedResource: NCIt:C3768][accessDate: 04-11-2010]
acinar cell carcinoma (morphologic abnormality)
Acinar carcinoma
NCIt:C3768
An information entity about the status of a publication describing the experiment.
publication status
Tomasz Adamusiak
GRO:0005417
MAT:0000364
James Malone
phloem
BTO:0001058
PO:0005417
A complex tissue in the vascular system of higher plants that consists mainly of sieve tubes and elongated parenchyma cells usually with fibers and that functions in translocation and in support and storage.
GRO:0005417[accessedResource: BTO:0001058][accessDate: 04-11-2010]
A complex tissue in the vascular system of higher plants that consists mainly of sieve tubes and elongated parenchyma cells usually with fibers and that functions in translocation and in support and storage.[accessedResource: BTO:0001058][accessDate: 04-11-2010]
pauciarticular juvenile rheumatoid arthritis
Pauciarticular onset juvenile chronic arthritis
pauciarticular onset juvenile arthritis[accessedResource: DOID:675][accessDate: 04-11-2010]
Tomasz Adamusiak
Pauciarticular juvenile rheumatoid arthritis (disorder)[accessedResource: DOID:675][accessDate: 04-11-2010]
Pauciarticular juvenile rheumatoid arthritis (disorder)
Pauciarticular onset juvenile chronic arthritis[accessedResource: DOID:675][accessDate: 04-11-2010]
pauciarticular onset juvenile arthritis
DOID:675
Caco-2/TC7
James Malone
Ele Holloway
C23H22O6
5'beta-rotenone
A chromenone that has formula C23H22O6.
James Malone
Noxfire
InChI=1/C23H22O6/c1-11(2)16-8-14-15(28-16)6-5-12-22(24)21-13-7-18(25-3)19(26-4)9-17(13)27-10-20(21)29-23(12)14/h5-7,9,16,20-21H,1,8,10H2,2-4H3/t16-,20-,21+/m1/s1
[2R-(2alpha,6aalpha,12aalpha)]-1,2,12,12a-tetrahydro-8,9-dimethoxy-2-(1-methylethenyl)[1]benzopyrano[3,4-b]furo[2,3-H][1]benzopyran-6(6aH)-one
http://www.ebi.ac.uk/efo/EFO_0001606
[H][C@@]1(Cc2c(O1)ccc1C(=O)[C@@]3([H])c4cc(OC)c(OC)cc4OC[C@@]3([H])Oc21)C(C)=C
Canex
InChIKey=JUVIOZPCNVVQFO-HBGVWJBIBF
Barbasco
(-)-cis-rotenone
CHEBI:28201
(2R,6aS,12aS)-8,9-dimethoxy-2-(prop-1-en-2-yl)-1,2,12,12a-tetrahydrochromeno[3,4-b]furo[2,3-h]chromen-6(6aH)-one
rotenone
SAEL:119
An organ of the female mammal for containing and usually for nourishing the young during development previous to birth.[accessedResource: BTO:0001424][accessDate: 04-11-2010]
Organ with organ cavity which is continuous proximally with the right and left uterine tubes and distally is connected to the vagina. Examples: There is only one uterus.
MAT:0000127
TADS:0000421
WBbt:0006760
EV:0100113
uterus
BTO:0001424
FMAID:17558
FBbt:00004924
womb[accessedResource: BTO:0001424][accessDate: 04-11-2010]
womb
An organ of the female mammal for containing and usually for nourishing the young during development previous to birth.
EMAPA:18985
MA:0000389
uterine horn
uterine horns
James Malone
uterine horns[accessedResource: MAT:0000127][accessDate: 04-11-2010]
uterine horn[accessedResource: MAT:0000127][accessDate: 04-11-2010]
CFU-GM
CFU-GM[accessedResource: CL:0000557][accessDate: 04-11-2010]
GMP
granulocyte-macrophage progenitor
CFU-C , Colony forming unit in culture
A progenitor cell that has plasma membrane part CD123, CD34, and CD45RA, lacks plasma membrane part CD19 and CD3, and is committed to the granulocyte and monocyte lineages.
CFU-C , Colony forming unit in culture[accessedResource: CL:0000557][accessDate: 04-11-2010]
GMP[accessedResource: CL:0000557][accessDate: 04-11-2010]
colony forming unit granulocyte macrophage[accessedResource: CL:0000557][accessDate: 04-11-2010]
granulocyte monocyte progenitor cell[accessedResource: CL:0000557][accessDate: 04-11-2010]
A hematopoietic progenitor cell that is committed to the granulocyte and monocyte lineages. These cells are CD123-positive, and do not express Gata-1, Gata2 but do express C/EBPa, and Pu.1.
CL:0000557
colony forming unit granulocyte macrophage
Tomasz Adamusiak
A hematopoietic progenitor cell that is committed to the granulocyte and monocyte lineages. These cells are CD123-positive, and do not express Gata-1, Gata2 but do express C/EBPa, and Pu.1.[accessedResource: CL:0000557][accessDate: 04-11-2010]
granulocyte monocyte progenitor cell
A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus).
acinar cell
acinous cell[accessedResource: CL:0000622][accessDate: 04-11-2010]
CL:0000622
Tomasz Adamusiak
Jie Zheng
pancreatic acinar cell
A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus).[accessedResource: CL:0000622][accessDate: 04-11-2010]
acinic cell[accessedResource: CL:0000622][accessDate: 04-11-2010]
acinous cell
acinic cell
ARMD - Age-related macular degeneration
DOID:10871
MACULOPATHIES AGE RELAT
GeneRIF:12742846
GeneRIF:12592048
Degenerative changes in the RETINA usually of older adults which results in a loss of vision in the center of the visual field (the MACULA LUTEA) because of damage to the retina. It occurs in dry and wet forms.[accessedResource: MSH:D008268][accessDate: 04-11-2010]
NIFSTD:birnlex_12812
Macular degeneration (disorder)[accessedResource: SNOMEDCT:302891003][accessDate: 04-11-2010]
GeneRIF:15761121
Macular Dystrophy[accessedResource: MSH:D008268][accessDate: 04-11-2010]
Degenerations, Age-Related Macular[accessedResource: MSH:D008268][accessDate: 04-11-2010]
Macular degeneration (disorder)
MACULAR DEGENERATION NOS[accessedResource: ICD9:362.50][accessDate: 04-11-2010]
Unspecified senile macular degeneration[accessedResource: DOID:10871][accessDate: 04-11-2010]
Age-related macular degeneration (disorder)[accessedResource: SNOMEDCT:267718000][accessDate: 04-11-2010]
Age related macular degeneration (disorder) [Ambiguous]
GeneRIF:12242346
Macular degeneration (senile) of retina, unspecified
SNOMEDCT:302891003
armD[accessedResource: DOID:10871][accessDate: 04-11-2010]
GeneRIF:15111581
GeneRIF:12005165
Degenerations, Macular
AAMD - Age related macular degeneration
GeneRIF:12882809
Tomasz Adamusiak
GeneRIF:15829498
ICD9:362.50
SNOMEDCT:267718000
Maculopathy, Age-Related
MSH:D008268
AMD - Age-related macular degeneration[accessedResource: SNOMEDCT:267718000][accessDate: 04-11-2010]
GeneRIF:14609921
AAMD - Age related macular degeneration[accessedResource: SNOMEDCT:267718000][accessDate: 04-11-2010]
Senile macular retinal degeneration[accessedResource: SNOMEDCT:302891003][accessDate: 04-11-2010]
Dystrophies, Macular
Age related macular degeneration (disorder) [Ambiguous][accessedResource: DOID:10871][accessDate: 04-11-2010]
Age-related macular degeneration (disorder)
MACULOPATHY AGE RELAT
Degenerative changes in the macula lutea of the retina.
Unspecified senile macular degeneration
James Malone
GeneRIF:15208270
Degeneration, Macular[accessedResource: MSH:D008268][accessDate: 04-11-2010]
Maculopathies, Age-Related
GeneRIF:15028284
GeneRIF:11919200
AMD - Age-related macular degeneration
Maculopathies, Age-Related[accessedResource: MSH:D008268][accessDate: 04-11-2010]
Senile macular retinal degeneration
Senile macular degeneration
Amended
Dystrophies, Macular[accessedResource: MSH:D008268][accessDate: 04-11-2010]
GeneRIF:12099691
ARMD - Age-related macular degeneration[accessedResource: SNOMEDCT:267718000][accessDate: 04-11-2010]
GeneRIF:14587307
GeneRIF:15761120
Senile macular degeneration[accessedResource: NIFSTD:birnlex_12812][accessDate: 04-11-2010]
Age-Related Macular Degenerations
GeneRIF:14597045
GeneRIF:12902384
GeneRIF:16079201
Senile macular degeneration of retina[accessedResource: NIFSTD:birnlex_12812][accessDate: 04-11-2010]
Dystrophy, Macular
age-related macular degeneration
Degenerative changes in the RETINA usually of older adults which results in a loss of vision in the center of the visual field (the MACULA LUTEA) because of damage to the retina. It occurs in dry and wet forms.
GeneRIF:15479453
GeneRIF:12427233
SMD - Senile macular degeneration
MACULOPATHY AGE RELAT[accessedResource: MSH:D008268][accessDate: 04-11-2010]
MACULAR DEGENERATION NOS
SMD - Senile macular degeneration[accessedResource: SNOMEDCT:267718000][accessDate: 04-11-2010]
Senile macular degeneration of retina
ARMD
GeneRIF:15761122
Macular degeneration (senile) of retina, unspecified[accessedResource: DOID:10871][accessDate: 04-11-2010]
AGE RELAT MACULOPATHIES[accessedResource: MSH:D008268][accessDate: 04-11-2010]
Age-Related Maculopathy[accessedResource: MSH:D008268][accessDate: 04-11-2010]
Macular Degenerations[accessedResource: MSH:D008268][accessDate: 04-11-2010]
Degeneration, Macular
Amended[accessedResource: DOID:10871][accessDate: 04-11-2010]
http://www.arabidopsis.org/servlets/TairObject?id=1005158837&type=germplasm
CS57813 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158837&type=germplasm
CS57813
James Malone
The first part of the small intestine extending from the pylorus to the jejunum.
BTO:0000365
EHDAA:3830
EMAPA:18852
duodenum
The first part of the small intestine extending from the pylorus to the jejunum.[accessedResource: BTO:0000365][accessDate: 04-11-2010]
MAT:0000044
SAEL:31
XAO:0000236
FMAID:7206
MA:0000338
James Malone
EV:0100073
Ele Holloway
James Malone
UACC893
A viral disease is a disease factor that is caused primarily by the infection or otherise hosting of a virus.
viral disease
James Malone
ovarian adenoma benign
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0001532
C=C
ethene
CHEBI:18153
Aethylen
H2C=CH2
ethylene
CH2=CH2
InChI=1/C2H4/c1-2/h1-2H2
InChIKey=VGGSQFUCUMXWEO-UHFFFAOYAE
James Malone
An alkene that has formula C2H4.
C2H4
Aethen
James Malone
SUM185PE
GeneRIF:15845485
sepsis
James Malone
Sepsis, NOS[accessedResource: SNOMEDCT:91302008][accessDate: 04-11-2010]
GeneRIF:12947340
Blood Poisoning
GeneRIF:16260097
GeneRIF:12052963
GeneRIF:11770048
GeneRIF:15131465
GeneRIF:12946935
Septicemia
Sepsis, NOS
GeneRIF:12480554
GeneRIF:15383576
GeneRIF:12218141
Systemic infection, NOS[accessedResource: SNOMEDCT:91302008][accessDate: 04-11-2010]
GeneRIF:12219031
GeneRIF:14525968
GeneRIF:14659593
Pyohemias
GeneRIF:12117955
POIS BLOOD[accessedResource: MSH:D018805][accessDate: 04-11-2010]
Pyemia[accessedResource: MSH:D018805][accessDate: 04-11-2010]
Systemic infection
GeneRIF:15030585
GeneRIF:12198614
GeneRIF:15645239
Pyemia
GeneRIF:12959973
Systemic inflammatory response syndrome with a proven or suspected infectious etiology. When sepsis is associated with organ dysfunction distant from the site of infection, it is called severe sepsis. When sepsis is accompanied by HYPOTENSION despite adequate fluid infusion, it is called SEPTIC SHOCK.
GeneRIF:12093893
GeneRIF:12472775
GeneRIF:11876758
GeneRIF:15717270
Pyaemias
GeneRIF:15128822
GeneRIF:12031601
Pyaemias[accessedResource: MSH:D018805][accessDate: 04-11-2010]
SNOMEDCT:91302008
GeneRIF:15634936
Poisoning, Blood[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:16239554
GeneRIF:14688199
GeneRIF:15124023
GeneRIF:12946943
GeneRIF:15947070
GeneRIF:15557190
Sepsis associated with organ dysfunction distant from the site of infection.
Systemic inflammatory response syndrome with a proven or suspected infectious etiology. When sepsis is associated with organ dysfunction distant from the site of infection, it is called severe sepsis. When sepsis is accompanied by HYPOTENSION despite adequate fluid infusion, it is called SEPTIC SHOCK.[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:15650061
GeneRIF:12219025
GeneRIF:15155262
Systemic infection[accessedResource: SNOMEDCT:91302008][accessDate: 04-11-2010]
Septicemia, NOS
GeneRIF:12296849
GeneRIF:15504976
GeneRIF:12643861
Systemic disease associated with the presence of pathogenic microorganisms or their toxins in the blood.[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:15760677
Septicemia[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:12615620
GeneRIF:12147224
Systemic disease associated with the presence of pathogenic microorganisms or their toxins in the blood.
The presence of pathogenic microorganisms in the blood stream causing a rapidly progressing systemic reaction that may lead to shock. Symptoms include fever, chills, tachycardia, and increased respiratory rate. It is a medical emergency that requires urgent medical attention.[accessedResource: NCIt:C3364][accessDate: 04-11-2010]
GeneRIF:14991091
Sepsis associated with organ dysfunction distant from the site of infection.[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:12517942
GeneRIF:15563579
GeneRIF:15834314
GeneRIF:15845478
Blood Poisonings
GeneRIF:12022759
GeneRIF:15244040
GeneRIF:15634264
GeneRIF:15201701
GeneRIF:14993594
GeneRIF:15211109
GeneRIF:12055255
GeneRIF:15472172
GeneRIF:15328161
GeneRIF:12006369
GeneRIF:15489631
GeneRIF:12117983
Septicemias
Blood Poisonings[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:15834309
GeneRIF:15803053
Systemic infection (disorder)
GeneRIF:15240146
GeneRIF:15545825
GeneRIF:11774822
Septicemia caused by pyogenic microorganisms (e.g., STAPHYLOCOCCUS; BACILLUS), resulting in the formation of secondary foci of SUPPURATION and multiple ABSCESSES.[accessedResource: MSH:D018805][accessDate: 04-11-2010]
Sepsis, Severe
GeneRIF:15034057
GeneRIF:15614130
GeneRIF:12027409
NCIt:C3364
GeneRIF:15890324
Septicemias[accessedResource: MSH:D018805][accessDate: 04-11-2010]
Pyaemia
Pyohemias[accessedResource: MSH:D018805][accessDate: 04-11-2010]
Pyaemia[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:12604029
GeneRIF:15579460
A disease of infectious agent resulting from the presence of pathogenic microbial agents, including pathogenic viruses, pathogenic bacteria, fungi, protozoa, multicellular parasites, and aberrant proteins known as prions. These pathogens are able to cause disease in animals and/or plants. Infectious pathologies are usually qualified as contagious disease (also called communicable disease) due to their potentiality of transmission from one person or species to another.
GeneRIF:14517747
GeneRIF:15489642
GeneRIF:12593995
GeneRIF:12218091
GeneRIF:15545827
MSH:D018805
GeneRIF:12032273
Septicemia caused by pyogenic microorganisms (e.g., STAPHYLOCOCCUS; BACILLUS), resulting in the formation of secondary foci of SUPPURATION and multiple ABSCESSES.
GeneRIF:15129283
Pyohemia
Septicemia, NOS[accessedResource: SNOMEDCT:91302008][accessDate: 04-11-2010]
GeneRIF:12496437
The presence of pathogenic microorganisms in the blood stream causing a rapidly progressing systemic reaction that may lead to shock. Symptoms include fever, chills, tachycardia, and increased respiratory rate. It is a medical emergency that requires urgent medical attention.
GeneRIF:15585684
Pyemias
Pyohemia[accessedResource: MSH:D018805][accessDate: 04-11-2010]
Septicaemia, NOS
GeneRIF:15319291
Systemic infection, NOS
GeneRIF:12571074
GeneRIF:16207247
GeneRIF:11956648
Systemic infection (disorder)[accessedResource: SNOMEDCT:91302008][accessDate: 04-11-2010]
Severe Sepsis[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:15050965
GeneRIF:15733912
GeneRIF:12869495
GeneRIF:15187138
GeneRIF:12721157
GeneRIF:14966572
GeneRIF:11776298
GeneRIF:14660484
GeneRIF:15155612
Septicaemia, NOS[accessedResource: SNOMEDCT:91302008][accessDate: 04-11-2010]
POIS BLOOD
Pyemias[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:14634136
GeneRIF:15554961
true
millimole
http://www.ebi.ac.uk/efo/EFO_0001802
James Malone
A millimole is a substance unit equal to a thousandth of a mol or 10^[-3] mol.
UO:0000040
mmol
A substance unit equal to a thousandth of a mol or 10^[-3] mol.
H9
Tomasz Adamusiak
PMID:18564034
protocol
MO_214
Tomasz Adamusiak
true
A protocol is an information entity which is a set of instructions that describe an how an experiment is done.
Jie Zheng
a protocol is a plan specification which has sufficient level of detail and quantitative information to communicate it between domain experts, so that different domain experts will reliably be able to independently reproduce the process.
http://www.ebi.ac.uk/efo/EFO_0001442
James Malone
plan specification
A large, flat, oval cell found in connective tissue and responsible for the formation of fibers.
NIFSTD:nlx_cell_20090201
A connective-tissue cell of mesenchymal origin that secretes proteins and especially molecular collagen from which the extracellular fibrillar matrix of connective tissue forms.[accessedResource: BTO:0000452][accessDate: 04-11-2010]
fibroblast
A connective-tissue cell of mesenchymal origin that secretes proteins and especially molecular collagen from which the extracellular fibrillar matrix of connective tissue forms.
A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules.
CL:0000057
A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules. Flattened and irregular in outline with branching processes; appear fusiform or spindle-shaped.
A large, flat, oval cell found in connective tissue and responsible for the formation of fibers.[accessedResource: NIFSTD:nlx_cell_20090201][accessDate: 04-11-2010]
primary dermal fibroblast
James Malone
mouse embryonic fibroblast
A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules. Flattened and irregular in outline with branching processes; appear fusiform or spindle-shaped.[accessedResource: CL:0000057][accessDate: 04-11-2010]
BTO:0000452
Tomasz Adamusiak
ITM-E6E7-ST
James Malone
Ele Holloway
FMA:30319
ligament
James Malone
thioridazinum
CSc1ccc2Sc3ccccc3N(CCC3CCCCN3C)c2c1
3-Methylmercapto-N-(2'-(N-methyl-2-piperidyl)ethyl)phenothiazine
Sonapax
Melleril
Malloryl
C21H26N2S2
Mellaril-S
CHEBI:9566
InChIKey=KLBQZWRITKRQQV-UHFFFAOYAE
2-Methylmercapto-10-(2-(N-methyl-2-piperidyl)ethyl)phenothiazine
Mellerette
Meleril
A phenothiazine derivative having a methylsulfanyl subsitituent at the 2-position and a (1-methylpiperidin-2-yl)ethyl] group at the N-10 position.
InChI=1/C21H26N2S2/c1-22-13-6-5-7-16(22)12-14-23-18-8-3-4-9-20(18)25-21-11-10-17(24-2)15-19(21)23/h3-4,8-11,15-16H,5-7,12-14H2,1-2H3
10-[2-(1-methyl-2-piperidyl)ethyl]-2-methylsulfanyl-phenothiazine
Thioridazin
A phenothiazine that has formula C21H26N2S2.
10-[2-(1-methylpiperidin-2-yl)ethyl]-2-(methylsulfanyl)-10H-phenothiazine
Mellerets
tioridazina
Mellaril
Mallorol
thioridazine
Orsanil
http://www.ebi.ac.uk/efo/EFO_0001625
CHEBI:25675
oligomycin
http://www.ebi.ac.uk/efo/EFO_0001586
oligomycins
phytogenic insecticides
http://www.ebi.ac.uk/efo/EFO_0001819
botanical insecticides
phytogenic insecticide
An insecticide compound naturally occurring in plants.
CHEBI:22917
James Malone
botanical insecticide
RGD:1357955
Wistar-Furth
James Malone
animal reproductive system cell
http://www.arabidopsis.org/servlets/TairObject?id=1005158793&type=germplasm
CS57769 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158793&type=germplasm
CS57769
James Malone
SNOMEDCT:226097005
Jie Zheng
HF - High fat diet
High fat diet (finding)[accessedResource: SNOMEDCT:226097005][accessDate: 04-11-2010]
HF - High fat diet[accessedResource: SNOMEDCT:226097005][accessDate: 04-11-2010]
high fat diet
High fat diet (finding)
Tomasz Adamusiak
Hyperlipidemia, Multiple Lipoprotein Type
GeneRIF:12401883
GeneRIF:12738753
Familial hyperlipoproteinaemia type IIb
Hyperlipidemias, Multiple Lipoprotein-Type[accessedResource: MSH:D006950][accessDate: 04-11-2010]
GeneRIF:12468272
familial combined hyperlipidemia (disorder)
Hyperlipidemia, Multiple Lipoprotein-Type[accessedResource: MSH:D006950][accessDate: 04-11-2010]
Multiple-type hyperlipidemia
ICD9:272.2
Familial multiple lipoprotein-type hyperlipidemia
A type of familial lipid metabolism disorder characterized by a variable pattern of elevated plasma CHOLESTEROL and/or TRIGLYCERIDES. Multiple genes on different chromosomes may be involved, such as the major late transcription factor (UPSTREAM STIMULATORY FACTORS) on CHROMOSOME 1.
FCHL - Familial combined hyperlipidaemia[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
GeneRIF:16076849
Multiple-type hyperlipidaemia
Familial combined hyperlipidaemia
Familial multiple lipoprotein-type hyperlipidaemia
Hyperapobetalipoproteinemia[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
Familial combined hyperlipidaemia[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
GeneRIF:15136067
MSH:D006950
Familial hyperlipoproteinemia type IIb
hyperbetalipoproteinemia with prebetalipoproteinemia[accessedResource: DOID:13809][accessDate: 04-11-2010]
FCHL - Familial combined hyperlipidemia[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
SNOMEDCT:267434003
mixed hyperlipidemia (disorder)[accessedResource: DOID:13809][accessDate: 04-11-2010]
familial combined hyperlipidemia (disorder) [Ambiguous]
familial multiple lipoprotein-type hyperlipidemia (disorder)
Mixed hyperlipidemia
Familial multiple lipoprotein-type hyperlipidemia[accessedResource: SNOMEDCT:299465007][accessDate: 04-11-2010]
Familial hyperlipoproteinemia type IIb[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
FCHL - Familial combined hyperlipidaemia
GeneRIF:12006395
GeneRIF:14680975
Hyperapobetalipoproteinemia
Fredrickson type IIb hyperlipoproteinaemia
Hyperapobetalipoproteinaemia
A type of familial lipid metabolism disorder characterized by a variable pattern of elevated plasma CHOLESTEROL and/or TRIGLYCERIDES. Multiple genes on different chromosomes may be involved, such as the major late transcription factor (UPSTREAM STIMULATORY FACTORS) on CHROMOSOME 1.[accessedResource: MSH:D006950][accessDate: 04-11-2010]
Fredrickson type IIb hyperlipoproteinemia[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
Familial multiple lipoprotein-type hyperlipidaemia[accessedResource: SNOMEDCT:299465007][accessDate: 04-11-2010]
Combined Hyperlipidemias, Familial[accessedResource: MSH:D006950][accessDate: 04-11-2010]
hyperbetalipoproteinemia with prebetalipoproteinemia
Mixed hyperlipidaemia[accessedResource: SNOMEDCT:267434003][accessDate: 04-11-2010]
DOID:13809
Fredrickson type IIb hyperlipoproteinaemia[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
familial combined hyperlipidemia (disorder) [Ambiguous][accessedResource: DOID:13809][accessDate: 04-11-2010]
Mixed hyperlipidaemia
SNOMEDCT:238040008
Familial hyperlipoproteinaemia type IIb[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
familial multiple lipoprotein-type hyperlipidemia (disorder)[accessedResource: DOID:13809][accessDate: 04-11-2010]
type IIb hyperlipoproteinemia
familial combined hyperlipidemia
FCHL - Familial combined hyperlipidemia
Fredrickson type IIb hyperlipoproteinemia
type IIb hyperlipoproteinemia[accessedResource: DOID:13809][accessDate: 04-11-2010]
GeneRIF:14991056
Familial Combined Hyperlipidemias
Familial combined hyperlipidemia (disorder)[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
James Malone
GeneRIF:12370850
SNOMEDCT:299465007
GeneRIF:15959806
Mixed hyperlipidemia[accessedResource: ICD9:272.2][accessDate: 04-11-2010]
Hyperapobetalipoproteinaemia[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
Mixed hyperlipidemia (disorder)
Multiple Lipoprotein-Type Hyperlipidemias
GeneRIF:11979403
GeneRIF:15976322
Multiple-type hyperlipidaemia[accessedResource: SNOMEDCT:267434003][accessDate: 04-11-2010]
Multiple-type hyperlipidemia[accessedResource: SNOMEDCT:267434003][accessDate: 04-11-2010]
Was originally considered to be a breast cancer cell line but has since been identified as a melanoma cell line.
MDAMB435
James Malone
dexametasona
http://www.ebi.ac.uk/efo/EFO_0001519
A fluorinated steroid that has formula C22H29FO5.
Decadron
16alpha-Methyl-9alpha-fluoro-1-dehydrocortisol
[H][C@@]12C[C@@H](C)[C@](O)(C(=O)CO)[C@@]1(C)C[C@H](O)[C@@]1(F)[C@@]2([H])CCC2=CC(=O)C=C[C@]12C
9alpha-Fluoro-16alpha-methylprednisolone
C22H29FO5
dexamethasone
CHEBI:41879
InChIKey=UREBDLICKHMUKA-CXSFZGCWBM
InChI=1/C22H29FO5/c1-12-8-16-15-5-4-13-9-14(25)6-7-19(13,2)21(15,23)17(26)10-20(16,3)22(12,28)18(27)11-24/h6-7,9,12,15-17,24,26,28H,4-5,8,10-11H2,1-3H3/t12-,15+,16+,17+,19+,20+,21+,22+/m1/s1
dexamethasonum
James Malone
9-fluoro-11beta,17,21-trihydroxy-16alpha-methylpregna-1,4-diene-3,20-dione
1-Dehydro-16alpha-methyl-9alpha-fluorohydrocortisone
Stria terminalis nucleus
Nucleus of stria terminalis[accessedResource: FMA:61884][accessDate: 04-11-2010]
MA:0000925
Stria terminalis nucleus[accessedResource: FMA:61884][accessDate: 04-11-2010]
Nuclei of stria terminalis[accessedResource: FMA:61884][accessDate: 04-11-2010]
FMA:61884
Nucleus of stria terminalis
Intercalate nucleus of stria terminalis
nucleus of terminal stria
Bed nucleus of stria terminalis[accessedResource: FMA:61884][accessDate: 04-11-2010]
Bed nucleus of stria terminalis
Intercalate nucleus of stria terminalis[accessedResource: FMA:61884][accessDate: 04-11-2010]
Nuclei of stria terminalis
iberin
PC-7
James Malone
Ele Holloway
CHEBI:50148
fenpropimorph
4-[3-[4-(1,1-dimethylethyl)phenyl]-2-methylpropyl]-2,6-dimethylmorpholine
InChI=1/C20H33NO/c1-15(12-21-13-16(2)22-17(3)14-21)11-18-7-9-19(10-8-18)20(4,5)6/h7-10,15-17H,11-14H2,1-6H3
A morpholine that has formula C20H33NO.
Mistral
http://www.ebi.ac.uk/efo/EFO_0002408
James Malone
Corbel
CC(CN1CC(C)OC(C)C1)Cc1ccc(cc1)C(C)(C)C
C20H33NO
4-[3-(4-tert-butylphenyl)-2-methylpropyl]-2,6-dimethylmorpholine
InChIKey=RYAUSSKQMZRMAI-UHFFFAOYAY
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158687&type=germplasm
CS57663 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158687&type=germplasm
CS57663
James Malone
foetal structure
NCI-H838
James Malone
Ele Holloway
NCIt:C37417
NOD
NOD[accessedResource: NCIt:C37417][accessDate: 04-11-2010]
NOD mouse
Tomasz Adamusiak
Jie Zheng
NCI-H446
James Malone
Ele Holloway
InChIKey=QKSKPIVNLNLAAV-UHFFFAOYAK
bis(2-chloroethyl) sulphide
sulfur mustard
Lost
Yperite
bis(2-chloroethyl) sulfide
1-chloro-2-[(2-chloroethyl)thio]ethane
James Malone
bis(2-chloroethyl)sulfane
mustard gas
1,1'-thiobis(2-chloroethane)
ClCCSCCCl
Senfgas
InChI=1/C4H8Cl2S/c5-1-3-7-4-2-6/h1-4H2
CHEBI:25434
An ethyl sulfide that has formula C4H8Cl2S.
C4H8Cl2S
http://www.ebi.ac.uk/efo/EFO_0001492
1-chloro-2-[(2-chloroethyl)sulfanyl]ethane
TANOUE
James Malone
Ele Holloway
UMUC3
James Malone
Ele Holloway
NALM6
James Malone
Ele Holloway
GeneRIF:14663483
GeneRIF:12154078
GeneRIF:12185581
GeneRIF:15328517
GeneRIF:15644444
GeneRIF:11807986
DOID:769
GeneRIF:12557224
GeneRIF:15930276
GeneRIF:12118090
GeneRIF:12438307
GeneRIF:16177824
NIFSTD:birnlex_12631
GeneRIF:11861392
GeneRIF:16125842
GeneRIF:16051641
GeneRIF:15849504
Tomasz Adamusiak
GeneRIF:15375504
Neuroblastoma (Schwannian Stroma-Poor)[accessedResource: NCIt:C3270][accessDate: 04-11-2010]
GeneRIF:16092940
GeneRIF:14745549
GeneRIF:12031683
GeneRIF:12916719
GeneRIF:12829373
neuroblastoma NOS (morphologic abnormality)[accessedResource: DOID:769][accessDate: 04-11-2010]
A common neoplasm of early childhood arising from neural crest cells in the sympathetic nervous system, and characterized by diverse clinical behavior, ranging from spontaneous remission to rapid metastatic progression and death. This tumor is the most common intraabdominal malignancy of childhood, but it may also arise from thorax, neck, or rarely occur in the central nervous system. Histologic features include uniform round cells with hyperchromatic nuclei arranged in nests and separated by fibrovascular septa. Neuroblastomas may be associated with the opsoclonus-myoclonus syndrome. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2099-2101; Curr Opin Oncol 1998 Jan;10(1):43-51)[accessedResource: MSH:D009447][accessDate: 04-11-2010]
[M]Neuroblastoma NOS
GeneRIF:11877677
GeneRIF:12209604
GeneRIF:11737230
neuroblastoma (morphologic abnormality)
GeneRIF:12545167
GeneRIF:15607966
Sympathicoblastoma
GeneRIF:15322424
GeneRIF:12808116
GeneRIF:12576454
Central neuroblastoma[accessedResource: SNOMEDCT:87364003][accessDate: 04-11-2010]
GeneRIF:12962147
GeneRIF:12598334
GeneRIF:15015775
GeneRIF:12239177
Neuroblastoma, NOS
GeneRIF:15547663
GeneRIF:12884264
GeneRIF:11877670
GeneRIF:15741235
GeneRIF:16228012
GeneRIF:15168079
NCIt:C3270
James Malone
GeneRIF:15136145
GeneRIF:11836564
GeneRIF:15280446
GeneRIF:14654552
SNOMEDCT:87364003
[M]Neuroblastoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:269507008][accessDate: 04-11-2010]
GeneRIF:14995074
GeneRIF:12907629
GeneRIF:15166121
GeneRIF:15827327
GeneRIF:11870543
GeneRIF:11744098
GeneRIF:16091745
GeneRIF:13679866
(neuroblastoma NOS) or (sympathicoblastoma)
Sympathicoblastoma[accessedResource: SNOMEDCT:87364003][accessDate: 04-11-2010]
GeneRIF:15488758
GeneRIF:12675130
GeneRIF:15882878
GeneRIF:12647219
neuroblastoma (Schwannian Stroma-Poor)
GeneRIF:12629151
GeneRIF:15117961
GeneRIF:15240516
A neuroblastic tumor characterized by the presence of neuroblastic cells, the absence of ganglion cells, and the absence of a prominent Schwannian stroma formation.
GeneRIF:12174591
GeneRIF:15650242
GeneRIF:16232196
GeneRIF:15218241
GeneRIF:12964007
[M]Neuroblastoma NOS[accessedResource: SNOMEDCT:269507008][accessDate: 04-11-2010]
neuroblastoma
GeneRIF:15486895
(neuroblastoma NOS) or (sympathicoblastoma)[accessedResource: DOID:769][accessDate: 04-11-2010]
GeneRIF:11705866
A neuroblastic tumor characterized by the presence of neuroblastic cells, the absence of ganglion cells, and the absence of a prominent Schwannian stroma formation.[accessedResource: NCIt:C3270][accessDate: 04-11-2010]
NB - Neuroblastoma
Central neuroblastoma
GeneRIF:14719101
GeneRIF:12629521
Neuroblastoma (morphologic abnormality)[accessedResource: SNOMEDCT:87364003][accessDate: 04-11-2010]
GeneRIF:15719172
GeneRIF:12888911
GeneRIF:15518890
GeneRIF:12593854
GeneRIF:15514946
GeneRIF:15994346
Neuroblastomas[accessedResource: MSH:D009447][accessDate: 04-11-2010]
MSH:D009447
GeneRIF:15083193
GeneRIF:15316056
A common neoplasm of early childhood arising from neural crest cells in the sympathetic nervous system, and characterized by diverse clinical behavior, ranging from spontaneous remission to rapid metastatic progression and death. This tumor is the most common intraabdominal malignancy of childhood, but it may also arise from thorax, neck, or rarely occur in the central nervous system. Histologic features include uniform round cells with hyperchromatic nuclei arranged in nests and separated by fibrovascular septa. Neuroblastomas may be associated with the opsoclonus-myoclonus syndrome. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2099-2101; Curr Opin Oncol 1998 Jan;10(1):43-51)
GeneRIF:16098972
GeneRIF:15004408
A common neoplasm of early childhood arising from neural crest cells in the sympathetic nervous system, and characterized by diverse clinical behavior, ranging from spontaneous remission to rapid metastatic progression and death. This tumor is the most common intraabdominal malignancy of childhood, but it may also arise from thorax, neck, or rarely occur in the central nervous system. Histologic features include uniform round cells with hyperchromatic nuclei arranged in nests and separated by fibrovascular septa. Neuroblastomas may be associated with the opsoclonus-myoclonus syndrome (MeSH).[accessedResource: NIFSTD:birnlex_12631][accessDate: 04-11-2010]
GeneRIF:15998644
GeneRIF:15024693
neuroblastoma NOS (morphologic abnormality)
GeneRIF:14645238
GeneRIF:15448191
GeneRIF:11928813
GeneRIF:14724587
[M]Neuroblastoma NOS (morphologic abnormality)
GeneRIF:15516980
GeneRIF:12163469
Neuroblastoma, NOS[accessedResource: SNOMEDCT:87364003][accessDate: 04-11-2010]
GeneRIF:12085233
GeneRIF:12672031
GeneRIF:11782392
GeneRIF:16007146
GeneRIF:14988008
GeneRIF:15618969
GeneRIF:16166307
GeneRIF:11859407
GeneRIF:12717420
NB - Neuroblastoma[accessedResource: SNOMEDCT:87364003][accessDate: 04-11-2010]
Neuroblastomas
A common neoplasm of early childhood arising from neural crest cells in the sympathetic nervous system, and characterized by diverse clinical behavior, ranging from spontaneous remission to rapid metastatic progression and death. This tumor is the most common intraabdominal malignancy of childhood, but it may also arise from thorax, neck, or rarely occur in the central nervous system. Histologic features include uniform round cells with hyperchromatic nuclei arranged in nests and separated by fibrovascular septa. Neuroblastomas may be associated with the opsoclonus-myoclonus syndrome (MeSH).
GeneRIF:11881792
SNOMEDCT:269507008
GeneRIF:15735700
FBbt:00001720
embryonic corpus cardiacum
corpus cardiacum placode[accessedResource: FBbt:00001720][accessDate: 04-11-2010]
The corpora cardiaca precursor first appear during stage 10 as two pairs of head mesoderm cells between the roof of the stomodeum and the inner surface of the brain primordium. Between stages 11 and 15, these cells migrate posteriorly, gradually increasing in number. During stage 15, they fuse with the precursors of the corpus allatum from the gnathal mesoderm to form the ring gland.
P1 CC
James Malone
The corpora cardiaca precursor first appear during stage 10 as two pairs of head mesoderm cells between the roof of the stomodeum and the inner surface of the brain primordium. Between stages 11 and 15, these cells migrate posteriorly, gradually increasing in number. During stage 15, they fuse with the precursors of the corpus allatum from the gnathal mesoderm to form the ring gland.[accessedResource: FBbt:00001720][accessDate: 04-11-2010]
embryonic corpus allatum[accessedResource: FBbt:00001720][accessDate: 04-11-2010]
embryonic corpus allatum
P1 CC[accessedResource: FBbt:00001720][accessDate: 04-11-2010]
corpus cardiacum primordium[accessedResource: FBbt:00001720][accessDate: 04-11-2010]
corpus cardiacum placode
corpus cardiacum primordium
Panc1
Ele Holloway
James Malone
PANC-1
JRT3T35
James Malone
Ele Holloway
InChI=1/C20H24ClN3S/c1-22-11-13-23(14-12-22)9-4-10-24-17-5-2-3-6-19(17)25-20-8-7-16(21)15-18(20)24/h2-3,5-8,15H,4,9-14H2,1H3
A N-methylpiperazine that has formula C20H24ClN3S.
proclorperazina
prochlorperazine
C20H24ClN3S
2-chloro-10-[3-(4-methylpiperazin-1-yl)propyl]-10H-phenothiazine
Procloperazine
CHEBI:8435
N-(gamma-(4'-Methylpiperazinyl-1')propyl)-3-chlorophenothiazine
2-Chloro-10-(3-(4-methyl-1-piperazinyl)propyl)phenothiazine
Chloro-3 (N-methylpiperazinyl-3 propyl)-10 phenothiazine
A phenothiazine derivative having a chloro subsitituent at the 2-position and a 3-(4-methylpiperazin-1-yl)propyl group at the N-10 position.
Prochlorpermazine
prochlorperazinum
James Malone
http://www.ebi.ac.uk/efo/EFO_0001597
Prochlorperazin
InChIKey=WIKYUJGCLQQFNW-UHFFFAOYAF
CN1CCN(CCCN2c3ccccc3Sc3ccc(Cl)cc23)CC1
Prochlorpromazine
3-Chloro-10-(3-(4-methyl-1-piperazinyl)propyl)phenothiazine
PERSON: James Malone
Time of survival is an information entity which is about the length of time a material entity has survived after some adverse event, such as infection from a disease.
time of survival
James Malone
cysteine
C3H7NO2S
L-2-Amino-3-mercaptopropionic acid
C
L-cysteine
(2R)-2-amino-3-sulfanylpropanoic acid
FREE CYSTEINE
L-Zystein
N[C@@H](CS)C(O)=O
InChIKey=XUJNEKJLAYXESH-SNQCPAJUDK
CHEBI:17561
http://www.ebi.ac.uk/efo/EFO_0001516
(2R)-2-amino-3-mercaptopropanoic acid
(R)-2-amino-3-mercaptopropanoic acid
Cys
L-Cystein
InChI=1/C3H7NO2S/c4-2(1-7)3(5)6/h2,7H,1,4H2,(H,5,6)/t2-/m0/s1/f/h5H
A cysteine that has formula C3H7NO2S.
western European house mouse
Mus domesticus
http://www.ebi.ac.uk/efo/EFO_0002647
Mus musculus domesticus
James Malone
Anal canal viewed anatomically[accessedResource: FMAID:15703][accessDate: 04-11-2010]
anal region
EV:0100082
The anus is situated in a small area of membrane between the bases of the cerci.[accessedResource: TGMA:0001279][accessDate: 04-11-2010]
Anal canal[accessedResource: FMAID:15703][accessDate: 04-11-2010]
The anus is situated in a small area of membrane between the bases of the cerci.
XAO:0000244
cloacal chamber
EMAPA:16831
cloaca[accessedResource: MAT:0000042][accessDate: 04-11-2010]
FMAID:15703
anal pad[accessedResource: FBbt:00005785][accessDate: 04-11-2010]
FBbt:00005785
James Malone
anal pad
Anatomical anal canal[accessedResource: FMAID:15703][accessDate: 04-11-2010]
MAT:0000042
Anatomical anal canal
ZFA:0000330
anal canal
cloaca
anus
MA:0000328
cloacal chamber[accessedResource: MAT:0000042][accessDate: 04-11-2010]
anus[accessedResource: MAT:0000042][accessDate: 04-11-2010]
TGMA:0001279
SAEL:5
WBbt:0005774
Organ with organ cavity which is continuous proximally with the rectum and distally terminates with the anus. Examples: There is only one anal canal.
Anal canal viewed anatomically
corpus callosum
NCIt:C12446
A white matter structure within the cleft that separates the left and right cerebral hemispheres in the mammalian brain. It is composed of a wide, flat bundle of 200-250 million axonal projections.[accessedResource: NCIt:C12446][accessDate: 04-11-2010]
BTO:0000615
The great band of commissural fibers uniting the cerebral hemispheres of higher mammals including humans.[accessedResource: BTO:0000615][accessDate: 04-11-2010]
James Malone
A white matter structure within the cleft that separates the left and right cerebral hemispheres in the mammalian brain. It is composed of a wide, flat bundle of 200-250 million axonal projections.
The great band of commissural fibers uniting the cerebral hemispheres of higher mammals including humans.
Adenocarcinoma of prostate[accessedResource: SNOMEDCT:399490008][accessDate: 04-11-2010]
DOID:2526
prostate cancer
GeneRIF:12115574
GeneRIF:12664577
GeneRIF:15131044
GeneRIF:15073126
Adenocarcinoma of prostate (disorder)
An adenocarcinoma arising from the prostate gland. It is one of the most common malignant tumors afflicting men. The majority of adenocarcinomas arise in the peripheral zone and a minority occurs in the central or the transitional zone of the prostate gland. Grading of prostatic adenocarcinoma predicts disease progression and correlates with survival. Several grading systems have been proposed, of which the Gleason system is the most commonly used. Gleason sums of 2 to 4 represent well-differentiated disease, 5 to 7 moderately differentiated disease and 8 to 10 poorly differentiated disease. Prostatic-specific antigen (PSA) serum test is widely used as a screening test for the early detection of prostatic adenocarcinoma. Treatment options include radical prostatectomy, radiation therapy, androgen ablation and cryotherapy. Watchful waiting or surveillance alone is an option for older patients with low-grade or low-stage disease.
James Malone
GeneRIF:14612932
GeneRIF:15041704
An adenocarcinoma arising from the prostate gland. It is one of the most common malignant tumors afflicting men. The majority of adenocarcinomas arise in the peripheral zone and a minority occurs in the central or the transitional zone of the prostate gland. Grading of prostatic adenocarcinoma predicts disease progression and correlates with survival. Several grading systems have been proposed, of which the Gleason system is the most commonly used. Gleason sums of 2 to 4 represent well-differentiated disease, 5 to 7 moderately differentiated disease and 8 to 10 poorly differentiated disease. Prostatic-specific antigen (PSA) serum test is widely used as a screening test for the early detection of prostatic adenocarcinoma. Treatment options include radical prostatectomy, radiation therapy, androgen ablation and cryotherapy. Watchful waiting or surveillance alone is an option for older patients with low-grade or low-stage disease.[accessedResource: NCIt:C2919][accessDate: 04-11-2010]
GeneRIF:16324197
adenocarcinoma of prostate (disorder)[accessedResource: DOID:2526][accessDate: 04-11-2010]
GeneRIF:15256061
GeneRIF:12865322
GeneRIF:12433721
GeneRIF:15381379
GeneRIF:11550208
GeneRIF:11813207
SNOMEDCT:399490008
GeneRIF:11023533
Adenocarcinoma of Prostate
GeneRIF:15146458
GeneRIF:11790779
Adenocarcinoma of the Prostate
prostate adenocarcinoma
GeneRIF:15665279
GeneRIF:14559809
GeneRIF:15138198
Adenocarcinoma of the Prostate[accessedResource: NCIt:C2919][accessDate: 04-11-2010]
NCIt:C2919
GeneRIF:15609334
GeneRIF:15994952
WHO grade III mixed glioma[accessedResource: DOID:7306][accessDate: 04-11-2010]
anaplastic oligoastrocytoma
Ele Holloway
anaplastic oligoastrocytoma (morphologic abnormality)[accessedResource: DOID:7306][accessDate: 04-11-2010]
anaplastic oligoastrocytoma (morphologic abnormality)
James Malone
WHO grade III mixed glioma
DOID:7306
GLI56
James Malone
http://www.genedb.org/genedb/Search?organism=cerevisiae&name=YPL262W&isid=true
FUM1 is a yeast strain as described in http://www.genedb.org/genedb/Search?organism=cerevisiae&name=YPL262W&isid=true
FUM1
James Malone
ventral cord
subesophageal + T1 + T2 + T3 + A1 + A2 + A3 + A4 + A5 + A6 + A7 + A8 ganglia
larval ventral ganglion
subesophageal + T1 + T2 + T3 + A1 + A2 + A3 + A4 + A5 + A6 + A7 + A8 ganglia[accessedResource: FBbt:00001102][accessDate: 04-11-2010]
James Malone
MAT:0000339
FBbt:00001102
.[accessedResource: FBbt:00001102][accessDate: 04-11-2010]
BTO:0002328
ventral nerve cord
The pair of closely united ventral longitudinal nerves with their segmental ganglia that is characteristic of many elongate invertebrates (as earthworms).[accessedResource: BTO:0002328][accessDate: 04-11-2010]
larval ventral ganglion[accessedResource: FBbt:00001102][accessDate: 04-11-2010]
.
ventral cord[accessedResource: FBbt:00001102][accessDate: 04-11-2010]
The pair of closely united ventral longitudinal nerves with their segmental ganglia that is characteristic of many elongate invertebrates (as earthworms).
NCIt:C32205
bladder mucosa
James Malone
ZFS:0000013
blastula oblong
James Malone
BeWo
James Malone
Ele Holloway
SUM149PT
James Malone
CL:0000112
intermediolateral column motoneuron
columnar neuron
James Malone
1.5
true
obsolete_promyelocytic leukemia
James Malone
Duplication with acute promyelocytic leukemia (EFO_0000224)
true
UO:0000149
http://www.ebi.ac.uk/efo/EFO_0001727
A dervied time unit is a derived unit which is a standard measure of the dimension in which events occur in sequence.
A derived unit which is a standard measure of the dimension in which events occur in sequence.
derived time unit
James Malone
Acute Myelomonocytic Leukemia (FAB Type M4)
acute myelomonocytic leukemia
An acute leukemia characterized by the proliferation of both neutrophil and monocyte precursors. Patients typically present with anemia, thrombocytopenia, fever and fatigue. This type of leukemia frequently responds to aggressive therapy. (WHO, 2001) -- 2003
Tomasz Adamusiak
NCIt:C7463
An acute leukemia characterized by the proliferation of both neutrophil and monocyte precursors. Patients typically present with anemia, thrombocytopenia, fever and fatigue. This type of leukemia frequently responds to aggressive therapy. (WHO, 2001) -- 2003[accessedResource: NCIt:C7463][accessDate: 04-11-2010]
AMML[accessedResource: NCIt:C7463][accessDate: 04-11-2010]
AMML
Acute M4 Myeloid Leukemia[accessedResource: NCIt:C7463][accessDate: 04-11-2010]
Acute Myelomonocytic Leukemia (FAB Type M4)[accessedResource: NCIt:C7463][accessDate: 04-11-2010]
Acute M4 Myeloid Leukemia
MO_355
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#innate_behavior_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#innate_behavior_design[accessedResource: MO_355][accessDate: 04-11-2010]
innate behavior design
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ml[accessedResource: MO_488][accessDate: 04-11-2010]
true
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ml
milliliter
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001712
ml
A milliliter is a volume unit which is equal to one thousandth of a liter or 10^-3 L, or to 1 cubic centimeter.
Tomasz Adamusiak
MO_488
James Malone
A volume unit which is equal to one thousandth of a liter or 10^[-3] L, or to 1 cubic centimeter.
An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.
motor neuron
An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.[accessedResource: CL:0000100][accessDate: 04-11-2010]
CL:0000100
Neurons which activate muscle cells (MSH).
NIFSTD:sao1460710779
anterior horn cell[accessedResource: CL:0000100][accessDate: 04-11-2010]
Neurons which activate muscle cells (MSH).[accessedResource: NIFSTD:sao1460710779][accessDate: 04-11-2010]
anterior horn cell
motoneuron[accessedResource: CL:0000100][accessDate: 04-11-2010]
Tomasz Adamusiak
motoneuron
Sevoflurano
Tomasz Adamusiak
Sevofluranum
C4H3F7O
CHEBI:9130
InChI=1/C4H3F7O/c5-1-12-2(3(6,7)8)4(9,10)11/h2H,1H2
FCOC(C(F)(F)F)C(F)(F)F
sevoflurane
InChIKey=DFEYYRMXOJXZRJ-UHFFFAOYAO
Sevofluran
http://www.ebi.ac.uk/efo/EFO_0002733
An ether compound having fluoromethyl and 1,1,1,3,3,3-hexafluoroisopropyl as the two alkyl groups.
1,1,1,3,3,3-hexafluoro-2-(fluoromethoxy)propane
Ele Holloway
http://jaxmice.jax.org/strain/000691.html
NIFSTD:birnlex_557
129X1
129X1/SvJ is a substrain of the mouse strain 129 as described in Jackson Laboratory http://jaxmice.jax.org/strain/000691.html Note this strain was formerly called 129X1
129X1/SvJ
Tomasz Adamusiak
James Malone
NCI Metathesaurus: C0037658
somatosensory cortex
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158809&type=germplasm
CS57785 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158809&type=germplasm
CS57785
James Malone
Mixed Lobular and Ductal Carcinoma of Breast[accessedResource: NCIt:C5160][accessDate: 10-05-2010]
[M]Infiltrating duct and lobular carcinoma
ductal breast carcinoma In situ and Invasive Lobular carcinoma[accessedResource: DOID:6582][accessDate: 10-05-2010]
DCIS and Infiltrating Lobular Carcinoma
NCIt:C7689
Mixed Ductal and Lobular Carcinoma of Breast
mixed Lobular and ductal carcinoma
[M] Infiltrating duct and lobular carcinoma[accessedResource: SNOMEDCT:35232005][accessDate: 10-05-2010]
Invasive Ductal and Lobular Carcinoma In Situ
Infiltrating Ductal and Lobular Carcinoma in situ
Ductal Carcinoma in situ and Infiltrating Lobular Carcinoma
Infiltrating duct and lobular carcinoma
Lobular Carcinoma in situ and Invasive Ductal Carcinoma[accessedResource: NCIt:C7689][accessDate: 10-05-2010]
Mixed Ductal and Lobular Breast Carcinoma[accessedResource: NCIt:C5160][accessDate: 10-05-2010]
DCIS and Infiltrating Lobular Carcinoma[accessedResource: NCIt:C6939][accessDate: 10-05-2010]
James Malone
Mixed Ductal and Lobular Breast Carcinoma
Ductal Carcinoma in situ and Infiltrating Lobular Carcinoma[accessedResource: NCIt:C6939][accessDate: 10-05-2010]
NCIt:C6939
Lobular Carcinoma in situ and Invasive Ductal Carcinoma
Duplicate with invasive ductal and lobular carcinoma (EFO_0000552)
LCIS and Infiltrating Ductal Carcinoma[accessedResource: NCIt:C7689][accessDate: 10-05-2010]
Non-Infiltrating Ductal Carcinoma and Infiltrating Lobular Carcinoma
Infiltrating duct and lobular carcinoma in situ
Intraductal and lobular carcinoma
ductal breast carcinoma In situ and Invasive Lobular carcinoma
Lobular and ductal carcinoma[accessedResource: SNOMEDCT:35232005][accessDate: 10-05-2010]
Intraductal and lobular carcinoma[accessedResource: SNOMEDCT:35232005][accessDate: 10-05-2010]
Mixed Ductal and Lobular Carcinoma of the Breast[accessedResource: NCIt:C5160][accessDate: 10-05-2010]
obsolete_mixed lobular and ductal breast carcinoma
DCIS and ILC
Non-Infiltrating Ductal Carcinoma and ILC[accessedResource: NCIt:C6939][accessDate: 10-05-2010]
true
Mixed Ductal and Lobular Carcinoma of the Breast
SNOMEDCT:35232005
NCIt:C7690
DOID:6582
Infiltrating duct and lobular carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:35232005][accessDate: 10-05-2010]
Non-Infiltrating Ductal Carcinoma and Infiltrating Lobular Carcinoma[accessedResource: NCIt:C6939][accessDate: 10-05-2010]
LCIS and Infiltrating Ductal Carcinoma
Infiltrating duct and lobular carcinoma (morphologic abnormality)
Infiltrating Ductal and Lobular Carcinoma in situ[accessedResource: NCIt:C7689][accessDate: 10-05-2010]
1.5
Mixed Lobular and Ductal Carcinoma[accessedResource: NCIt:C5160][accessDate: 10-05-2010]
Infiltrating duct and lobular carcinoma[accessedResource: DOID:6582][accessDate: 10-05-2010]
NCIt:C5160
Infiltrating duct and lobular carcinoma in situ[accessedResource: SNOMEDCT:35232005][accessDate: 10-05-2010]
Ductal and Lobular Carcinoma
Invasive Ductal and Lobular Carcinoma In Situ[accessedResource: NCIt:C7689][accessDate: 10-05-2010]
DCIS and ILC[accessedResource: NCIt:C6939][accessDate: 10-05-2010]
Non-Infiltrating Ductal Carcinoma and ILC
James Malone
T47D
RERF-LC-AI
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158831&type=germplasm
CS57807 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158831&type=germplasm
CS57807
James Malone
SAEC is a cell line derived from Small Airway Epithelial Cells
SAEC
DOID:987
alopecia
Tomasz Adamusiak
FBbt:00005516
adult muscle precursor specific anlage
adult muscle precursor specific anlage[accessedResource: FBbt:00005516][accessDate: 04-11-2010]
adult muscle precursor primordium
James Malone
GeneRIF:15539010
GeneRIF:15286433
GeneRIF:12446618
GeneRIF:15232685
GeneRIF:15496156
GeneRIF:14610338
GeneRIF:14736962
GeneRIF:12757981
GeneRIF:14531794
GeneRIF:15830182
GeneRIF:16164635
GeneRIF:15502921
GeneRIF:14514642
GeneRIF:12874455
GeneRIF:15600254
GeneRIF:14521940
Diabetes mellitus type II [non-insulin dependent type] [NIDDM type] [adult-onset type] or unspecified type, not stated as uncontrolled, with renal manifestations
Renal disorder associated with diabetes mellitus[accessedResource: SNOMEDCT:127013003][accessDate: 04-11-2010]
GeneRIF:15016802
GeneRIF:15793258
GeneRIF:12722028
GeneRIF:15327405
GeneRIF:15983325
GeneRIF:15745834
Nephrotic syndrome in diabetes mellitus (disorder)
GeneRIF:12938144
Diabetic renal disease
Diabetes mellitus type II [non-insulin dependent type] [NIDDM type] [adult-onset type] or unspecified type, not stated as uncontrolled, with renal manifestations[accessedResource: ICD9:250.40][accessDate: 04-11-2010]
GeneRIF:16249462
GeneRIF:14586741
James Malone
DMII RENL NT ST UNCNTRLD[accessedResource: ICD9:250.40][accessDate: 04-11-2010]
Diabetic renal disease (disorder)[accessedResource: SNOMEDCT:127013003][accessDate: 04-11-2010]
GeneRIF:15957132
Renal disorder associated with diabetes mellitus
GeneRIF:14694018
SNOMEDCT:197605007
ICD9:250.40
ICD9:250.4
GeneRIF:15153757
Nephrotic syndrome in diabetes mellitus
DMII RENAL UNCNTRLD[accessedResource: ICD9:250.42][accessDate: 04-11-2010]
GeneRIF:14633865
SNOMEDCT:21858001
DOID:2370
GeneRIF:15942051
Diabetes-nephrosis syndrome
GeneRIF:12675860
GeneRIF:12171997
GeneRIF:12941731
GeneRIF:12500218
GeneRIF:15052533
GeneRIF:15322501
Diabetic renal disease (disorder)
GeneRIF:11845237
Diabetes mellitus type II [non-insulin dependent type] [NIDDM type] [adult-onset type] or unspecified type, uncontrolled, with renal manifestations
GeneRIF:12187087
GeneRIF:14747236
GeneRIF:15983323
GeneRIF:12086959
GeneRIF:12606536
GeneRIF:15915338
Kimmelstiel - Wilson disease
GeneRIF:14514644
GeneRIF:11770799
GeneRIF:15126006
GeneRIF:15888973
GeneRIF:14694017
GeneRIF:15983219
Diabetes with renal manifestations (disorder)[accessedResource: SNOMEDCT:21858001][accessDate: 04-11-2010]
GeneRIF:15946912
GeneRIF:12200076
Diabetes-nephrosis syndrome (disorder)[accessedResource: SNOMEDCT:54181000][accessDate: 04-11-2010]
GeneRIF:12610055
Diabetes-nephrosis syndrome[accessedResource: SNOMEDCT:54181000][accessDate: 04-11-2010]
GeneRIF:15790669
GeneRIF:12505748
GeneRIF:12784186
DMII RENL NT ST UNCNTRLD
GeneRIF:12540629
GeneRIF:12413777
GeneRIF:15120704
GeneRIF:11940319
GeneRIF:15047636
GeneRIF:15345671
GeneRIF:14748439
GeneRIF:14578305
Nephrotic syndrome in diabetes mellitus[accessedResource: SNOMEDCT:197605007][accessDate: 04-11-2010]
GeneRIF:12032186
GeneRIF:16211375
GeneRIF:15562008
Diabetes with renal manifestations
GeneRIF:14747204
SNOMEDCT:127013003
GeneRIF:14583183
Nephrotic syndrome in diabetes mellitus (disorder)[accessedResource: SNOMEDCT:197605007][accessDate: 04-11-2010]
GeneRIF:16301823
GeneRIF:12147786
GeneRIF:12147787
GeneRIF:12911551
GeneRIF:15308130
ICD9:250.42
GeneRIF:15223229
SNOMEDCT:54181000
GeneRIF:15616804
GeneRIF:12436341
GeneRIF:16091581
GeneRIF:16164625
GeneRIF:12882872
GeneRIF:12631336
GeneRIF:15489960
GeneRIF:16249547
diabetic nephropathy
GeneRIF:14674716
DMII RENAL UNCNTRLD
GeneRIF:14633859
GeneRIF:12897091
GeneRIF:16014032
GeneRIF:12105259
GeneRIF:15616035
Diabetic renal disease[accessedResource: SNOMEDCT:127013003][accessDate: 04-11-2010]
Diabetes mellitus type II [non-insulin dependent type] [NIDDM type] [adult-onset type] or unspecified type, uncontrolled, with renal manifestations[accessedResource: ICD9:250.42][accessDate: 04-11-2010]
GeneRIF:12630823
Diabetes with renal manifestations (disorder)
Diabetes-nephrosis syndrome (disorder)
GeneRIF:15610240
GeneRIF:15780082
GeneRIF:12644472
Kimmelstiel - Wilson disease[accessedResource: SNOMEDCT:197605007][accessDate: 04-11-2010]
Diabetes with renal manifestations[accessedResource: SNOMEDCT:21858001][accessDate: 04-11-2010]
promegakaryocyte
The earliest cytologically identifiable precursor in the thrombocytic series.
megacaryoblast
megakaryocyte progenitor cell
megacaryoblast[accessedResource: CL:0000553][accessDate: 04-11-2010]
James Malone
The earliest cytologically identifiable precursor in the thrombocytic series. This cell is capable of endomitosis and lacks expression of hematopoieitic lineage markers (lin-negative).[accessedResource: CL:0000553][accessDate: 04-11-2010]
megakaryoblast
promegacaryocyte
promegacaryocyte[accessedResource: CL:0000553][accessDate: 04-11-2010]
megacaryocyte progenitor cell
megacaryocyte progenitor cell[accessedResource: CL:0000553][accessDate: 04-11-2010]
megakaryoblast[accessedResource: CL:0000553][accessDate: 04-11-2010]
promegakaryocyte[accessedResource: CL:0000553][accessDate: 04-11-2010]
CL:0000553
The earliest cytologically identifiable precursor in the thrombocytic series. This cell is capable of endomitosis and lacks expression of hematopoieitic lineage markers (lin-negative).
FBbt:00005646
adult hindgut precursor
James Malone
true
1.5
Classical Hodgkin Lymphoma
cHL
A monoclonal B-cell lymphoproliferation in the vast majority of cases. It is characterized by a bimodal age distribution (15-30 years of life and late life) and is often associated with EBV infection. In less than 5% of cases it is a monoclonal proliferation of T-lymphocytes. Morphologically, it is characterized by the presence of Reed-Sternberg cells and mononuclear Hodgkin cells. The Reed-Sternberg and mononuclear Hodgkin cells are CD30 positive in nearly all cases and CD15 positive in the majority of cases.[accessedResource: C7164][accessDate: 10-05-2010]
Classical Hodgkin Lymphoma[accessedResource: C7164][accessDate: 10-05-2010]
obsolete_classical Hodgkin's lymphoma
CHL[accessedResource: C7164][accessDate: 10-05-2010]
Duplicate with Hodgkin's lymphoma (EFO_0000183)
A monoclonal B-cell lymphoproliferation in the vast majority of cases. It is characterized by a bimodal age distribution (15-30 years of life and late life) and is often associated with EBV infection. In less than 5% of cases it is a monoclonal proliferation of T-lymphocytes. Morphologically, it is characterized by the presence of Reed-Sternberg cells and mononuclear Hodgkin cells. The Reed-Sternberg and mononuclear Hodgkin cells are CD30 positive in nearly all cases and CD15 positive in the majority of cases.
Classical Hodgkin's Lymphoma
James Malone
C7164
Classical Hodgkin's Lymphoma[accessedResource: C7164][accessDate: 10-05-2010]
http://www.arabidopsis.org/servlets/TairObject?id=1005158668&type=germplasm
CS57644 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158668&type=germplasm
CS57644
James Malone
C8H12N4O4
InChI=1/C8H12N4O4/c9-7-10-3-12(8(15)11-7)6-1-4(14)5(2-13)16-6/h3-6,13-14H,1-2H2,(H2,9,11,15)/t4-,5+,6+/m0/s1/f/h9H2
http://www.ebi.ac.uk/efo/EFO_0001473
4-amino-1-(2-deoxy-beta-D-erythro-pentofuranosyl)-1,3,5-triazin-2(1H)-one
CHEBI:50131
decitabine
A 2'-deoxyribonucleoside that has formula C8H12N4O4.
4-amino-1-(2-deoxy-beta-D-erythro-pentofuranosyl)-s-triazin-2(1H)-one
5-aza-2'-deoxycytidine
InChIKey=XAUDJQYHKZQPEU-BRLQTKNBDS
5-azadeoxycytidine
Nc1ncn([C@H]2C[C@H](O)[C@@H](CO)O2)c(=O)n1
ENCODE functional genome mapping
Diffuse systemic sclerosis
diffuse scleroderma
A rapid onset form of SYSTEMIC SCLERODERMA with progressive widespread SKIN thickening over the arms, the legs and the trunk, resulting in stiffness and disability.
Diffuse cutaneous systemic sclerosis[accessedResource: SNOMEDCT:128460000][accessDate: 04-11-2010]
Diffuse cutaneous scleroderma
DOID:1580
Systemic Sclerosis, Progressive[accessedResource: MSH:D045743][accessDate: 04-11-2010]
SNOMEDCT:128460000
systemic sclerosis, diffuse (disorder)[accessedResource: DOID:1580][accessDate: 04-11-2010]
GeneRIF:16320328
Diffuse cutaneous scleroderma[accessedResource: SNOMEDCT:128460000][accessDate: 04-11-2010]
Progressive Scleroderma
A rapid onset form of SYSTEMIC SCLERODERMA with progressive widespread SKIN thickening over the arms, the legs and the trunk, resulting in stiffness and disability.[accessedResource: MSH:D045743][accessDate: 04-11-2010]
Progressive Scleroderma[accessedResource: MSH:D045743][accessDate: 04-11-2010]
Sclerosis, Progressive Systemic
Diffuse cutaneous systemic sclerosis
MSH:D045743
systemic sclerosis, diffuse (disorder)
James Malone
diffuse systemic sclerosis[accessedResource: DOID:1580][accessDate: 04-11-2010]
An assay where proteins in a sample are detected, quantified or otherwise analysed using mass spectrometry
proteomic profiling by mass spectrometer
NCIt:C4252
Cellular Myxoid Liposarcoma
A poorly differentiated liposarcoma, characterized by the presence of solid sheets of primitive round mesenchymal cells and the absence of myxoid stroma.
Cellular Myxoid Liposarcoma[accessedResource: NCIt:C4252][accessDate: 04-11-2010]
A poorly differentiated liposarcoma, characterized by the presence of solid sheets of primitive round mesenchymal cells and the absence of myxoid stroma.[accessedResource: NCIt:C4252][accessDate: 04-11-2010]
round cell liposarcoma
Tomasz Adamusiak
Mitochondrial Myopathy, Lactic Acidosis, Stroke-Like Episode
A mitochondrial disorder characterized by focal or generalized seizures, episodes of transient or persistent neurologic dysfunction resembling strokes, and ragged-red fibers on muscle biopsy. Affected individuals tend to be normal at birth through early childhood, then experience growth failure, episodic vomiting, and recurrent cerebral insults resulting in visual loss and hemiparesis. The cortical lesions tend to occur in the parietal and occipital lobes and are not associated with vascular occlusion. VASCULAR HEADACHE is frequently associated and the disorder tends to be familial. (From Joynt, Clinical Neurology, 1992, Ch56, p117)
A mitochondrial disorder characterized by focal or generalized seizures, episodes of transient or persistent neurologic dysfunction resembling strokes, and ragged-red fibers on muscle biopsy. Affected individuals tend to be normal at birth through early childhood, then experience growth failure, episodic vomiting, and recurrent cerebral insults resulting in visual loss and hemiparesis. The cortical lesions tend to occur in the parietal and occipital lobes and are not associated with vascular occlusion. VASCULAR HEADACHE is frequently associated and the disorder tends to be familial. (From Joynt, Clinical Neurology, 1992, Ch56, p117)[accessedResource: MSH:D017241][accessDate: 04-11-2010]
MSH:D017241
James Malone
MELAS syndrome
MELAS
Mitochondrial Myopathy, Lactic Acidosis, Stroke-Like Episode[accessedResource: MSH:D017241][accessDate: 04-11-2010]
MELAS[accessedResource: MSH:D017241][accessDate: 04-11-2010]
DOID:3687
GeneRIF:15466014
NCI-H1770
James Malone
Ele Holloway
DOID:5702
A liposarcoma with areas of pleomorphism, resembling malignant fibrous histiocytoma. It is the rarest liposarcoma variant and usually has an aggressive clinical course.[accessedResource: NCIt:C3705][accessDate: 04-11-2010]
Pleomorphic liposarcoma (disorder)
Tomasz Adamusiak
pleomorphic liposarcoma
NCIt:C3705
Pleomorphic liposarcoma (morphologic abnormality)[accessedResource: DOID:5702][accessDate: 04-11-2010]
Pleomorphic liposarcoma (morphologic abnormality)
Pleomorphic liposarcoma (disorder)[accessedResource: DOID:5702][accessDate: 04-11-2010]
A liposarcoma with areas of pleomorphism, resembling malignant fibrous histiocytoma. It is the rarest liposarcoma variant and usually has an aggressive clinical course.
Extra-Adrenal Chromaffinoma
James Malone
A benign or malignant sympathetic paraganglioma arising from paraganglia outside the adrenal gland. Clinical symptoms are related to secretion of catecholamines. Representative examples include the superior and inferior paraaortic and bladder paragangliomas.
Extra-Adrenal Chromaffinoma[accessedResource: NCIt:C48576][accessDate: 04-11-2010]
Extraadrenal Pheochromocytoma[accessedResource: NCIt:C48576][accessDate: 04-11-2010]
Extraadrenal Pheochromocytoma
NCIt:C48576
Extra-Adrenal Chromaffin Neoplasm
extra-adrenal sympathetic paraganglioma
Extra-Adrenal Pheochromocytoma[accessedResource: NCIt:C48576][accessDate: 04-11-2010]
Extra-Adrenal Sympathetic Paraganglionic Neoplasm[accessedResource: NCIt:C48576][accessDate: 04-11-2010]
Extra-Adrenal Pheochromocytoma
A benign or malignant sympathetic paraganglioma arising from paraganglia outside the adrenal gland. Clinical symptoms are related to secretion of catecholamines. Representative examples include the superior and inferior paraaortic and bladder paragangliomas.[accessedResource: NCIt:C48576][accessDate: 04-11-2010]
Extra-Adrenal Chromaffin Neoplasm[accessedResource: NCIt:C48576][accessDate: 04-11-2010]
Extra-Adrenal Sympathetic Paraganglionic Neoplasm
http://www.arabidopsis.org/servlets/TairObject?id=1005158852&type=germplasm
CS57828 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158852&type=germplasm
CS57828
James Malone
GM12154
James Malone
http://jaxmice.jax.org/strain/009294.html
ILSXISS122/TejJ
Tomasz Adamusiak
auditory system
AAO:0000631
ZFA:0001138
ear
MFO:0003660
XAO:0000189
Tomasz Adamusiak
auditory apparatus[accessedResource: MAT:0000138][accessDate: 04-11-2010]
EV:0100353
The organ of hearing.[accessedResource: BTO:0000368][accessDate: 04-11-2010]
NIFSTD:birnlex_1062
vestibuloauditpry system[accessedResource: MAT:0000138][accessDate: 04-11-2010]
BTO:0000368
EHDAA:502
MAT:0000138
EMAPA:16193
auris[accessedResource: BTO:0000368][accessDate: 04-11-2010]
vestibuloauditpry system
auris
otic vesicle[accessedResource: MAT:0000138][accessDate: 04-11-2010]
vestibuloauditory system
The organ of hearing.
auditory system[accessedResource: MAT:0000138][accessDate: 04-11-2010]
auditory apparatus
TAO:0001138
James Malone
FMAID:52780
vestibuloauditory system[accessedResource: TAO:0001138][accessDate: 04-11-2010]
otic vesicle
MA:0000236
FMA:62211
MA:0000870
Medial geniculate nuclei[accessedResource: FMA:62211][accessDate: 04-11-2010]
Medial geniculate nuclei
Medial geniculate body
Medial geniculate complex
James Malone
medial geniculate nucleus
MGN
Medial geniculate body[accessedResource: FMA:62211][accessDate: 04-11-2010]
Medial geniculate complex[accessedResource: FMA:62211][accessDate: 04-11-2010]
true
MAT:0000000
anatomy basic component
James Malone
substantia nigra and ventral tegmental area
Tomasz Adamusiak
Jie Zheng
normal cell line
PO:0009013
A formative plant tissue usually made up of small cells capable of dividing indefinitely and giving rise to similar cells or to cells that differentiate to produce the definitive tissues and organs.
meristem
A formative plant tissue usually made up of small cells capable of dividing indefinitely and giving rise to similar cells or to cells that differentiate to produce the definitive tissues and organs.[accessedResource: BTO:0000852][accessDate: 04-11-2010]
MAT:0000006
James Malone
Meristem is a plant component consisting of undifferentiated plant issue - the botanical equivalent of animal stem cells.
BTO:0000852
Undifferentiated plant issue - the botanical equivalent of animal stem cells
Undifferentiated plant issue - the botanical equivalent of animal stem cells[accessedResource: MAT:0000006][accessDate: 04-11-2010]
MG63
James Malone
Ele Holloway
deferrioxamine B
Deferrioxamine
InChIKey=UBQYURCVBFRUQT-VEORKLDJCD
deferoxamine
C25H48N6O8
deferoxaminum
An acyclic desferrioxamine that has formula C25H48N6O8.
Desferrioxamine
DFO
CC(=O)N(O)CCCCCNC(=O)CCC(=O)N(O)CCCCCNC(=O)CCC(=O)N(O)CCCCCN
CHEBI:4356
deferoxamina
N'-{5-[acetyl(hydroxy)amino]pentyl}-N-(5-{4-[(5-aminopentyl)(hydroxy)amino]-4-oxobutanamido}pentyl)-N-hydroxybutanediamide
InChI=1/C25H48N6O8/c1-21(32)29(37)18-9-3-6-16-27-22(33)12-14-25(36)31(39)20-10-4-7-17-28-23(34)11-13-24(35)30(38)19-8-2-5-15-26/h37-39H,2-20,26H2,1H3,(H,27,33)(H,28,34)/f/h27-28H
http://www.ebi.ac.uk/efo/EFO_0001518
desferrioxamine B
Deferoxamin
SNOMEDCT:268815007
Fetal growth retardation, unspecified, 750-999 grams[accessedResource: ICD9:764.93][accessDate: 04-11-2010]
Fetal growth retardation, unspecified, 1,750-1,999 grams[accessedResource: ICD9:764.97][accessDate: 04-11-2010]
FET GROWTH RETARD WTNOS
Microsomic baby
Intrauterine growth retardation[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
IUGR - Intrauterine growth retardation
GeneRIF:12362237
FET GRWTH RET 1500-1749G
FET GRWTH RET 1000-1249G[accessedResource: ICD9:764.94][accessDate: 04-11-2010]
ICD9:764.96
Foetal growth retardation, NOS
GeneRIF:12433638
FET GRWTH RET 1750-1999G[accessedResource: ICD9:764.97][accessDate: 04-11-2010]
Fetal growth retardation, unspecified, less than 500 grams
FGR - Fetal growth retardation
Fetal growth retardation, unspecified, 750-999 grams
James Malone
Fetal growth retardation, unspecified, 1,000-1,249 grams[accessedResource: ICD9:764.94][accessDate: 04-11-2010]
GeneRIF:12376298
Fetal growth retardation, unspecified, 1,000-1,249 grams
Fetal growth retardation, unspecified
Fetal growth retardation, unspecified, 1,750-1,999 grams
ICD9:764.95
Intrauterine growth retardation, NOS
Fetal growth retardation, unspecified, 1,500-1,749 grams[accessedResource: ICD9:764.96][accessDate: 04-11-2010]
Fetal growth retardation, unspecified, 2,500+ grams
Fetal growth retardation, unspecified, 500-749 grams[accessedResource: ICD9:764.92][accessDate: 04-11-2010]
Fetal growth retardation, unspecified, 1,500-1,749 grams
Poor fetal growth
GeneRIF:12072378
Poor fetal growth state
Fetal growth retardation (disorder)
GeneRIF:11903419
FET GRWTH RET 1000-1249G
FET GROWTH RET 2500+G[accessedResource: ICD9:764.99][accessDate: 04-11-2010]
ICD9:764.9
Intrauterine growth retardation, NOS[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
GeneRIF:11738801
FET GROWTH RET 750-999G
GeneRIF:12788896
FET GRWTH RET 1750-1999G
Intrauterine growth retardation
ICD9:764.97
ICD9:764.92
Poor fetal growth[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
GeneRIF:12920078
Fetal growth retardation, unspecified [weight]
FET GRWTH RET 2000-2499G[accessedResource: ICD9:764.98][accessDate: 04-11-2010]
FET GROWTH RET 500-749G[accessedResource: ICD9:764.92][accessDate: 04-11-2010]
Microsomia
ICD9:764.90
GeneRIF:15371566
Fetal growth retardation, unspecified, 2,000-2,499 grams[accessedResource: ICD9:764.98][accessDate: 04-11-2010]
Fetal growth retardation, unspecified, less than 500 grams[accessedResource: ICD9:764.91][accessDate: 04-11-2010]
FET GRWTH RET 1500-1749G[accessedResource: ICD9:764.96][accessDate: 04-11-2010]
Fetal growth retardation NOS[accessedResource: SNOMEDCT:268815007][accessDate: 04-11-2010]
Fetal Growth Retardation
Fetal growth retardation, unspecified, 500-749 grams
GeneRIF:12832488
ICD9:764.98
FET GROWTH RET 2500+G
GeneRIF:12576245
Fetal growth retardation (disorder)[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
GeneRIF:11924936
Fetal growth retardation, unspecified, 1,250-1,499 grams[accessedResource: ICD9:764.95][accessDate: 04-11-2010]
SNOMEDCT:22033007
GeneRIF:15712600
GeneRIF:14692644
FGR - Fetal growth retardation[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
Microsomic baby[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
GeneRIF:15625086
Fetal growth retardation, unspecified [weight][accessedResource: ICD9:764.90][accessDate: 04-11-2010]
Fetal growth retardation, unspecified, 1,250-1,499 grams
FET GROWTH RETARD <500G[accessedResource: ICD9:764.91][accessDate: 04-11-2010]
Fetal growth retardation NOS (disorder)[accessedResource: SNOMEDCT:268815007][accessDate: 04-11-2010]
GeneRIF:11738800
FET GROWTH RETARD WTNOS[accessedResource: ICD9:764.90][accessDate: 04-11-2010]
Poor fetal growth state[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
Fetal growth retardation, NOS
Microsomia[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
ICD9:764.91
Fetal growth retardation, unspecified[accessedResource: ICD9:764.9][accessDate: 04-11-2010]
FET GROWTH RETARD <500G
FET GRWTH RET 1250-1499G[accessedResource: ICD9:764.95][accessDate: 04-11-2010]
Fetal growth retardation, unspecified, 2,500+ grams[accessedResource: ICD9:764.99][accessDate: 04-11-2010]
GeneRIF:15166008
FET GRWTH RET 2000-2499G
FET GROWTH RET 500-749G
GeneRIF:14688210
Fetal growth retardation NOS (disorder)
DOID:13294
Fetal growth retardation, unspecified, 2,000-2,499 grams
Foetal growth retardation, NOS[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
FET GRWTH RET 1250-1499G
IUGR - Intrauterine growth retardation[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
ICD9:764.99
ICD9:764.94
FET GROWTH RET 750-999G[accessedResource: ICD9:764.93][accessDate: 04-11-2010]
ICD9:764.93
Fetal growth retardation[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
fetal growth restriction
GeneRIF:11809917
GeneRIF:15695771
The scalar number of injections administered to a material or organism.
number of injections
James Malone
EV:0100115
The mucous membrane lining the uterus.[accessedResource: BTO:0001422][accessDate: 04-11-2010]
Tunica mucosa (Endometrium)[accessedResource: FMAID:17742][accessDate: 04-11-2010]
James Malone
BTO:0001422
endometrium
Tunica mucosa (Endometrium)
uterine endometrium
FMAID:17742
MAT:0000319
uterine endometrium[accessedResource: BTO:0001422][accessDate: 04-11-2010]
The mucous membrane lining the uterus.
http://www.arabidopsis.org/servlets/TairObject?id=1005158775&type=germplasm
CS57751 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158775&type=germplasm
CS57751
James Malone
scales[accessedResource: ZFA:0000277][accessDate: 04-11-2010]
OntologyMappingImporter following MAT:0000257
James Malone
Dermal bone that is thin, flexible, and platelike, and that develops in overlapping skinfolds that cover the body and often the head of fish and the bases of the fins.[accessedResource: ZFA:0000277][accessDate: 04-11-2010]
scales
MO_108
scale
MAT:0000257
Jie Zheng
Tomasz Adamusiak
ZFA:0000277
Dermal bone that is thin, flexible, and platelike, and that develops in overlapping skinfolds that cover the body and often the head of fish and the bases of the fins.
http://www.arabidopsis.org/servlets/TairObject?id=1005158729&type=germplasm
CS57705 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158729&type=germplasm
CS57705
James Malone
Dedifferentiated Liposarcoma[accessedResource: MSH:D008080][accessDate: 04-11-2010]
GeneRIF:15149855
[M]Liposarcoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189777004][accessDate: 04-11-2010]
Liposarcoma, no ICD-O subtype (morphologic abnormality)
Liposarcomas
Liposarcoma NOS (morphologic abnormality)
James Malone
A malignant tumor derived from primitive or embryonal lipoblastic cells. It may be composed of well-differentiated fat cells or may be dedifferentiated: myxoid (LIPOSARCOMA, MYXOID), round-celled, or pleomorphic, usually in association with a rich network of capillaries. Recurrences are common and dedifferentiated liposarcomas metastasize to the lungs or serosal surfaces. (From Dorland, 27th ed; Stedman, 25th ed)
[M]Liposarcoma NOS[accessedResource: SNOMEDCT:189777004][accessDate: 04-11-2010]
A malignant lipomatous neoplasm that arises in fat cells in deep soft tissue retroperitoneum.
Pleomorphic Liposarcomas
[M]Liposarcoma NOS (morphologic abnormality)
GeneRIF:14989736
Dedifferentiated Liposarcomas
Liposarcoma, NOS
Liposarcoma, NOS[accessedResource: SNOMEDCT:49430005][accessDate: 04-11-2010]
SNOMEDCT:189777004
DOID:3382
MSH:D008080
A usually painless malignant tumor that arises from adipose tissue. Microscopically, it may contain a spectrum of neoplastic adipocytes ranging from lipoblasts to pleomorphic malignant adipocytes. Representative morphologic variants include: well differentiated, dedifferentiated, pleomorphic, and myxoid/round cell liposarcoma. The metastatic potential is higher in less differentiated tumors.
Liposarcoma NOS (morphologic abnormality)[accessedResource: DOID:3382][accessDate: 04-11-2010]
Fibroliposarcoma
A usually painless malignant tumor that arises from adipose tissue. Microscopically, it may contain a spectrum of neoplastic adipocytes ranging from lipoblasts to pleomorphic malignant adipocytes. Representative morphologic variants include: well differentiated, dedifferentiated, pleomorphic, and myxoid/round cell liposarcoma. The metastatic potential is higher in less differentiated tumors.[accessedResource: NCIt:C3194][accessDate: 04-11-2010]
A malignant tumor derived from primitive or embryonal lipoblastic cells. It may be composed of well-differentiated fat cells or may be dedifferentiated: myxoid (LIPOSARCOMA, MYXOID), round-celled, or pleomorphic, usually in association with a rich network of capillaries. Recurrences are common and dedifferentiated liposarcomas metastasize to the lungs or serosal surfaces. (From Dorland, 27th ed; Stedman, 25th ed)[accessedResource: MSH:D008080][accessDate: 04-11-2010]
Pleomorphic Liposarcomas[accessedResource: MSH:D008080][accessDate: 04-11-2010]
Liposarcoma, no ICD-O subtype
Liposarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:49430005][accessDate: 04-11-2010]
Liposarcoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:49430005][accessDate: 04-11-2010]
liposarcoma
Liposarcoma, Pleomorphic[accessedResource: MSH:D008080][accessDate: 04-11-2010]
Liposarcoma (morphologic abnormality)
GeneRIF:15201968
Liposarcoma (disorder)[accessedResource: SNOMEDCT:254829001][accessDate: 04-11-2010]
[M]Liposarcoma NOS
Liposarcoma morphology[accessedResource: SNOMEDCT:49430005][accessDate: 04-11-2010]
Pleomorphic Liposarcoma
NCIt:C3194
Liposarcomas, Dedifferentiated[accessedResource: MSH:D008080][accessDate: 04-11-2010]
SNOMEDCT:49430005
A malignant lipomatous neoplasm that arises in fat cells in deep soft tissue retroperitoneum.[accessedResource: DOID:3382][accessDate: 04-11-2010]
Liposarcoma, Dedifferentiated
Fibroliposarcoma[accessedResource: SNOMEDCT:49430005][accessDate: 04-11-2010]
Liposarcomas[accessedResource: MSH:D008080][accessDate: 04-11-2010]
Liposarcoma morphology
SNOMEDCT:254829001
Liposarcoma, no ICD-O subtype[accessedResource: SNOMEDCT:49430005][accessDate: 04-11-2010]
Tomasz Adamusiak
Liposarcoma (disorder)
Geniculate nucleus (body structure)
SNOMEDCT:279108008
Geniculate nucleus (body structure)[accessedResource: SNOMEDCT:279108008][accessDate: 04-11-2010]
James Malone
geniculate nucleus
Tomasz Adamusiak
HCC827
Tomasz Adamusiak
reticulum cell
CL:0000432
CL:0000451
CL:0000451[accessedResource: BTO:0002042][accessDate: 04-11-2010]
interdigitating cell[accessedResource: CL:0000451][accessDate: 04-11-2010]
James Malone
reticular cell
interdigitating cell
Large, stellate fibroblast found along the network of collagen fibers of the reticulum of the spleen; synthesize the matrix components of the reticulum.
A special type of cell that is a key regulator of the immune system, acting as a professional antigen-presenting cell (APC) capable of activating naive T cells and stimulating the growth and differentiation of B cells. Dendritic cells are found, for example, in the lymph nodes and spleen. As an APC, a dendritic cell can retain antigen for long periods on its surface, present the antigen to a T or B cell and so influence their behavior.[accessedResource: BTO:0002042][accessDate: 04-11-2010]
reticulum cell[accessedResource: CL:0000432][accessDate: 04-11-2010]
BTO:0002042
A cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.[accessedResource: CL:0000451][accessDate: 04-11-2010]
A special type of cell that is a key regulator of the immune system, acting as a professional antigen-presenting cell (APC) capable of activating naive T cells and stimulating the growth and differentiation of B cells. Dendritic cells are found, for example, in the lymph nodes and spleen. As an APC, a dendritic cell can retain antigen for long periods on its surface, present the antigen to a T or B cell and so influence their behavior.
dendritic cell
A cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.
CL:0000451
Large, stellate fibroblast found along the network of collagen fibers of the reticulum of the spleen; synthesize the matrix components of the reticulum.[accessedResource: CL:0000432][accessDate: 04-11-2010]
veiled cell[accessedResource: CL:0000451][accessDate: 04-11-2010]
reticular cell[accessedResource: BTO:0002042][accessDate: 04-11-2010]
veiled cell
birnlex_7081
Theiler stage 26
Tomasz Adamusiak
Jie Zheng
A HGF is a cell line.
A HGF is all of the following: something that has as quality a normal, something that derives from a Homo
sapiens, and something that derives from a fibroblast.
Human Gingival Fibroblasts
HGF
Natural Language Generator 8th April 2010
James Malone
MAT:0000153
BTO:0000294
dermis
A collagenous layer of the skin subjacent to the epidermis and covering the hypodermis. It contains various types of cells (e.g. fibroblasts, pigment cells, nerve, blood vessels and scales.
EMAPA:17527
corium
James Malone
The sensitive vascular inner mesodermic layer of the skin.[accessedResource: BTO:0000294][accessDate: 04-11-2010]
The sensitive vascular inner mesodermic layer of the skin.
MA:0000152
FMAID:70323
cutis
EV:0100154
AAO:0000128
XAO:0000217
SAEL:27
Dense irregular connective tissue which consists of a papillary layer and a reticular layer.
A collagenous layer of the skin subjacent to the epidermis and covering the hypodermis. It contains various types of cells (e.g. fibroblasts, pigment cells, nerve, blood vessels and scales.[accessedResource: ZFA:0001119][accessDate: 04-11-2010]
cutis[accessedResource: BTO:0000294][accessDate: 04-11-2010]
corium[accessedResource: BTO:0000294][accessDate: 04-11-2010]
ZFA:0001119
acetylcholinesterase inhibitor
CHEBI:38462
acetylcholinesterase inhibitors
Any substance that inhibits the enzyme acetylcholinesterase from breaking down acetylcholine into choline and acetic acid.
AChEI
James Malone
acetylcholine esterase inhibitor
http://www.ebi.ac.uk/efo/EFO_0001868
http://www.arabidopsis.org/servlets/TairObject?id=1005158654&type=germplasm
CS57630 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158654&type=germplasm
CS57630
James Malone
SNOMEDCT:35728003
Primary familial cardiomyopathy
Familial cardiomyopathy (disorder)
Primary familial cardiomyopathy[accessedResource: SNOMEDCT:35728003][accessDate: 04-11-2010]
Familial cardiomyopathy (disorder)[accessedResource: SNOMEDCT:35728003][accessDate: 04-11-2010]
familial cardiomyopathy
Tomasz Adamusiak
SKLMS1
James Malone
Ele Holloway
ZF4
James Malone
CL:0000148
BTO:0000847
A pigment cell derived from the neural crest. Contains melanin-filled pigment granules, which gives a brown to black appearance.
A pigment cell derived from the neural crest. Contains melanin-filled pigment granules, which gives a brown to black appearance.[accessedResource: CL:0000148][accessDate: 04-11-2010]
An epidermal cell that produces melanin.[accessedResource: BTO:0000847][accessDate: 04-11-2010]
melanophore[accessedResource: CL:0000148][accessDate: 04-11-2010]
An epidermal cell that produces melanin.
melanophore
melanocyte
Tomasz Adamusiak
One of the modified leaves comprising a calyx.
PO:0009031
MAT:0000355
One of the modified leaves comprising a calyx.[accessedResource: BTO:0001547][accessDate: 04-11-2010]
GRO:0005655
James Malone
GRO:0005655[accessedResource: BTO:0001547][accessDate: 04-11-2010]
sepal
BTO:0001547
Polyps[accessedResource: MSH:D011127][accessDate: 04-11-2010]
GeneRIF:12351556
James Malone
GeneRIF:12916705
DOID:3475
A usually exophytic mass attached to the underlying tissue by a broad base or a thin stalk. Polyps can be neoplastic or non-neoplastic. Neoplastic polyps usually represent proliferations of the epithelium, and are commonly seen in the gastrointestinal tract. Polyps of the gastrointestinal tract are often called adenomas, are associated with dysplasia, and may eventually transform into carcinomas. Non-neoplastic polyps may be inflammatory, degenerative, or the result of malformations.[accessedResource: NCIt:C3340][accessDate: 04-11-2010]
A usually exophytic mass attached to the underlying tissue by a broad base or a thin stalk. Polyps can be neoplastic or non-neoplastic. Neoplastic polyps usually represent proliferations of the epithelium, and are commonly seen in the gastrointestinal tract. Polyps of the gastrointestinal tract are often called adenomas, are associated with dysplasia, and may eventually transform into carcinomas. Non-neoplastic polyps may be inflammatory, degenerative, or the result of malformations. -- 2004
polyps
MSH:D011127
GeneRIF:15017003
Discrete abnormal tissue masses that protrude into the lumen of the DIGESTIVE TRACT or the RESPIRATORY TRACT. Polyps can be spheroidal, hemispheroidal, or irregular mound-shaped structures attached to the MUCOUS MEMBRANE of the lumen wall either by a stalk, pedunculus, or by a broad base.
Discrete abnormal tissue masses that protrude into the lumen of the DIGESTIVE TRACT or the RESPIRATORY TRACT. Polyps can be spheroidal, hemispheroidal, or irregular mound-shaped structures attached to the MUCOUS MEMBRANE of the lumen wall either by a stalk, pedunculus, or by a broad base.[accessedResource: MSH:D011127][accessDate: 04-11-2010]
GeneRIF:11932925
A usually exophytic mass attached to the underlying tissue by a broad base or a thin stalk. Polyps can be neoplastic or non-neoplastic. Neoplastic polyps usually represent proliferations of the epithelium, and are commonly seen in the gastrointestinal tract. Polyps of the gastrointestinal tract are often called adenomas, are associated with dysplasia, and may eventually transform into carcinomas. Non-neoplastic polyps may be inflammatory, degenerative, or the result of malformations.
GeneRIF:12218179
GeneRIF:12970739
GeneRIF:12151354
NCIt:C3340
GeneRIF:15489648
polyp (morphologic abnormality)
GeneRIF:12807720
polyp (morphologic abnormality)[accessedResource: DOID:3475][accessDate: 04-11-2010]
GeneRIF:12855642
polyp
GeneRIF:12841871
James Malone
Granular leucocyte
A leukocyte with abundant granules in the cytoplasm.
A polymorphonuclear white blood cell with granule-containing cytoplasm.
A polymorphonuclear white blood cell with granule-containing cytoplasm.[accessedResource: BTO:0000539][accessDate: 04-11-2010]
Granular leukocyte[accessedResource: CL:0000094][accessDate: 04-11-2010]
Granular leucocyte[accessedResource: CL:0000094][accessDate: 04-11-2010]
granulocyte
CL:0000094
A leukocyte with abundant granules in the cytoplasm.[accessedResource: CL:0000094][accessDate: 04-11-2010]
Granular leukocyte
BTO:0000539
GRO:0005317[accessedResource: BTO:0000628][accessDate: 04-11-2010]
panicle
BTO:0000628
GRO:0005317
inflorescence
James Malone
A flower cluster with a definite arrangement.
panicle[accessedResource: BTO:0000628][accessDate: 04-11-2010]
A flower cluster with a definite arrangement.[accessedResource: BTO:0000628][accessDate: 04-11-2010]
PO:0009049
Mucoviscidosis
GeneRIF:15184199
Cystic fibrosis NOS
GeneRIF:15684701
GeneRIF:11845300
GeneRIF:15367919
GeneRIF:14695120
GeneRIF:15489228
GeneRIF:12142723
GeneRIF:11823525
GeneRIF:12692180
GeneRIF:15007059
GeneRIF:15024729
GeneRIF:12660625
Meconium ileus in cystic fibrosis (disorder)[accessedResource: DOID:1485][accessDate: 04-11-2010]
GeneRIF:16236890
GeneRIF:12919146
GeneRIF:16281647
GeneRIF:15025720
GeneRIF:12370389
GeneRIF:12948935
GeneRIF:12297838
Fibrocystic disease
cystic fibrosis with meconium ileus (disorder)[accessedResource: DOID:1485][accessDate: 04-11-2010]
GeneRIF:11877474
Cystic fibrosis NOS[accessedResource: SNOMEDCT:190911006][accessDate: 04-11-2010]
cystic fibrosis with pulmonary manifestations[accessedResource: DOID:1485][accessDate: 04-11-2010]
cystic fibrosis with pulmonary manifestations
GeneRIF:12820707
GeneRIF:15463895
A congenital metabolic disorder affecting the exocrine glands, inherited as an autosomal trait. The secretions of exocrine glands are abnormal, resulting in excessively viscid mucus production which causes obstruction of passageways (including pancreatic and bile ducts, intestines, and bronchi). The sweat sodium and chloride content are increased. Symptoms usually appear in childhood and include meconium ileus, poor growth despite good appetite, malabsorption and foul bulky stools, chronic bronchitis with cough, recurrent pneumonia, bronchiectasis, emphysema, clubbing of the fingers, and salt depletion in hot weather.[accessedResource: NCIt:C2975][accessDate: 04-11-2010]
GeneRIF:15070876
GeneRIF:11872746
GeneRIF:12579467
GeneRIF:16267280
Cystic fibrosis without mention of meconium ileus
GeneRIF:15385508
GeneRIF:11667971
cystic fibrosis with combined manifestations
Cystic fibrosis (disorder)[accessedResource: SNOMEDCT:190905008][accessDate: 04-11-2010]
CYSTIC FIBROS W/O ILEUS
Mucoviscidosis[accessedResource: SNOMEDCT:190905008][accessDate: 04-11-2010]
GeneRIF:15611333
ICD9:277.0
GeneRIF:12142724
GeneRIF:16207846
GeneRIF:15274124
GeneRIF:12732620
GeneRIF:15579374
cystic fibrosis with combined manifestations[accessedResource: DOID:1485][accessDate: 04-11-2010]
A congenital metabolic disorder affecting the exocrine glands, inherited as an autosomal trait. The secretions of exocrine glands are abnormal, resulting in excessively viscid mucus production which causes obstruction of passageways (including pancreatic and bile ducts, intestines, and bronchi). The sweat sodium and chloride content are increased. Symptoms usually appear in childhood and include meconium ileus, poor growth despite good appetite, malabsorption and foul bulky stools, chronic bronchitis with cough, recurrent pneumonia, bronchiectasis, emphysema, clubbing of the fingers, and salt depletion in hot weather. -- 2003
CYSTIC FIBROS W/O ILEUS[accessedResource: ICD9:277.00][accessDate: 04-11-2010]
cystic fibrosis with meconium ileus (disorder)
Cystic fibrosis without mention of meconium ileus[accessedResource: ICD9:277.00][accessDate: 04-11-2010]
cystic fibrosis with meconium ileus[accessedResource: DOID:1485][accessDate: 04-11-2010]
cystic fibrosis
GeneRIF:11988083
GeneRIF:12847263
GeneRIF:15537723
GeneRIF:16137181
GeneRIF:15463896
NCIt:C2975
cystic fibrosis with other manifestations
GeneRIF:11956211
SNOMEDCT:190905008
cystic fibrosis with gastrointestinal manifestations
CF[accessedResource: SNOMEDCT:190905008][accessDate: 04-11-2010]
GeneRIF:12220181
GeneRIF:11809765
Cystic fibrosis NOS (disorder)
GeneRIF:15490240
DOID:1485
GeneRIF:15336594
GeneRIF:15781764
GeneRIF:14699484
CF - Cystic fibrosis[accessedResource: SNOMEDCT:190905008][accessDate: 04-11-2010]
cystic fibrosis with gastrointestinal manifestations[accessedResource: DOID:1485][accessDate: 04-11-2010]
cystic fibrosis with pulmonary manifestations (disorder)[accessedResource: DOID:1485][accessDate: 04-11-2010]
ICD9:277.00
GeneRIF:12070134
cystic fibrosis with other manifestations (disorder)
SNOMEDCT:190911006
Meconium obstruction of intestine in mucoviscidosis
cystic fibrosis with other manifestations (disorder)[accessedResource: DOID:1485][accessDate: 04-11-2010]
A congenital metabolic disorder affecting the exocrine glands, inherited as an autosomal trait. The secretions of exocrine glands are abnormal, resulting in excessively viscid mucus production which causes obstruction of passageways (including pancreatic and bile ducts, intestines, and bronchi). The sweat sodium and chloride content are increased. Symptoms usually appear in childhood and include meconium ileus, poor growth despite good appetite, malabsorption and foul bulky stools, chronic bronchitis with cough, recurrent pneumonia, bronchiectasis, emphysema, clubbing of the fingers, and salt depletion in hot weather.
GeneRIF:15107292
cystic fibrosis with other manifestations[accessedResource: DOID:1485][accessDate: 04-11-2010]
James Malone
Meconium obstruction of intestine in mucoviscidosis[accessedResource: DOID:1485][accessDate: 04-11-2010]
Fibrocystic disease[accessedResource: SNOMEDCT:190905008][accessDate: 04-11-2010]
GeneRIF:15638824
GeneRIF:14685937
Cystic fibrosis NOS (disorder)[accessedResource: SNOMEDCT:190911006][accessDate: 04-11-2010]
Cystic fibrosis (disorder)
GeneRIF:15246975
GeneRIF:11984593
GeneRIF:15025858
GeneRIF:12151438
Meconium ileus in cystic fibrosis (disorder)
GeneRIF:15738290
GeneRIF:12000722
cystic fibrosis with meconium ileus
GeneRIF:15964250
GeneRIF:15533353
CF
CF - Cystic fibrosis
GeneRIF:12547728
GeneRIF:15463893
cystic fibrosis with pulmonary manifestations (disorder)
GeneRIF:12026214
GeneRIF:15964894
GeneRIF:12355402
HERED SPASTIC PARAPLEGIA[accessedResource: ICD9:334.1][accessDate: 04-11-2010]
Spastic Paraplegia, Hereditary, Autosomal Dominant[accessedResource: MSH:D015419][accessDate: 04-11-2010]
GeneRIF:12161613
HMSN V
Hereditary motor and sensory neuropathy, type V[accessedResource: SNOMEDCT:76043009][accessDate: 04-11-2010]
HSP - Hereditary spastic paraplegia
Strumpell disease[accessedResource: SNOMEDCT:39912006][accessDate: 04-11-2010]
GeneRIF:15159500
Spastic paraplegia with hypertrophic sensory-motor neuropathy, type V[accessedResource: SNOMEDCT:76043009][accessDate: 04-11-2010]
GeneRIF:15858810
A group of inherited diseases that share similar phenotypes but are genetically diverse. Different genetic loci for autosomal recessive, autosomal dominant, and x-linked forms of hereditary spastic paraplegia have been identified. Clinically, patients present with slowly progressive distal limb weakness and lower extremity spasticity. Peripheral sensory neurons may be affected in the later stages of the disease. (J Neurol Neurosurg Psychiatry 1998 Jan;64(1):61-6; Curr Opin Neurol 1997 Aug;10(4):313-8)
Spastic congenital paraplegia
HMSN V (Hereditary Motor and Sensory Neuropathy Type V)[accessedResource: MSH:D015419][accessDate: 04-11-2010]
HMSN V[accessedResource: SNOMEDCT:76043009][accessDate: 04-11-2010]
Spastic Paraplegias, Hereditary
Strumpell-Lorrain disease
Strumpell disease
A group of inherited diseases that share similar phenotypes but are genetically diverse. Different genetic loci for autosomal recessive, autosomal dominant, and x-linked forms of hereditary spastic paraplegia have been identified. Clinically, patients present with slowly progressive distal limb weakness and lower extremity spasticity. Peripheral sensory neurons may be affected in the later stages of the disease. (J Neurol Neurosurg Psychiatry 1998 Jan;64(1):61-6; Curr Opin Neurol 1997 Aug;10(4):313-8)[accessedResource: MSH:D015419][accessDate: 04-11-2010]
GeneRIF:15248095
Hereditary spastic paraplegia (disorder)[accessedResource: SNOMEDCT:39912006][accessDate: 04-11-2010]
DOID:2476
Hereditary sensory-motor neuropathy, type V (disorder)
Spastic Paraplegias, Hereditary[accessedResource: MSH:D015419][accessDate: 04-11-2010]
GeneRIF:16026783
Type V Hereditary Motor and Sensory Neuropathy
Hypertrophic Motor-Sensory Neuropathy-Spastic Paraplegia[accessedResource: MSH:D015419][accessDate: 04-11-2010]
Hereditary Motor Sensory Neuropathy with Pyramidal Signs
HSMN V
Hereditary X Linked Recessive Spastic Paraplegia[accessedResource: MSH:D015419][accessDate: 04-11-2010]
GeneRIF:15452312
Hereditary motor-sensory neuropathy with pyramidal signs[accessedResource: SNOMEDCT:76043009][accessDate: 04-11-2010]
Hereditary sensory-motor neuropathy, type V
SNOMEDCT:39912006
GeneRIF:12490534
Hereditary spastic paraplegia (disorder)
X-Linked, Spastic Paraplegia, Hereditary
Familial spastic paraplegia syndrome[accessedResource: SNOMEDCT:39912006][accessDate: 04-11-2010]
GeneRIF:15667412
GeneRIF:11898127
hereditary spastic paraplegia
GeneRIF:11704932
GeneRIF:15939438
Type V, HMSN
Autosomal Dominant Hereditary Spastic Paraplegia
HSMN V[accessedResource: DOID:2476][accessDate: 04-11-2010]
HMSN V (Hereditary Motor and Sensory Neuropathy Type V)
HSP - Hereditary spastic paraplegia[accessedResource: SNOMEDCT:39912006][accessDate: 04-11-2010]
Hereditary sensory-motor neuropathy, type V (disorder)[accessedResource: SNOMEDCT:76043009][accessDate: 04-11-2010]
Hereditary sensory-motor neuropathy, type V[accessedResource: SNOMEDCT:76043009][accessDate: 04-11-2010]
MSH:D015419
Strumpell-Lorrain disease[accessedResource: SNOMEDCT:39912006][accessDate: 04-11-2010]
ICD9:334.1
X-Linked, Spastic Paraplegia, Hereditary[accessedResource: MSH:D015419][accessDate: 04-11-2010]
Spastic Paraplegia-Hypertrophic Motor-Sensory Neuropathy
SNOMEDCT:76043009
Hereditary X Linked Recessive Spastic Paraplegia
HMSN Type V[accessedResource: MSH:D015419][accessDate: 04-11-2010]
Hereditary Autosomal Recessive Spastic Paraplegia
Familial spastic paraplegia syndrome
HERED SPASTIC PARAPLEGIA
GeneRIF:12134148
Spastic congenital paraplegia[accessedResource: SNOMEDCT:39912006][accessDate: 04-11-2010]
Spastic paraplegia with hypertrophic sensory-motor neuropathy, type V
Spastic Paraplegia, Autosomal Recessive, Hereditary[accessedResource: MSH:D015419][accessDate: 04-11-2010]
James Malone
James Malone
A benign or malignant, primary or metastatic neoplasm of the bladder. - 2003[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
NGB - New growth of bladder[accessedResource: DOID:5428][accessDate: 04-11-2010]
GeneRIF:12672029
Cancer of the Bladder
GeneRIF:15643502
An abdominal cancer and bladder disease and urologic neoplasm that results_in malignant growth located_in the urinary bladder.
Bladder Cancers[accessedResource: MSH:D001749][accessDate: 04-11-2010]
neoplasm of bladder (disorder)
Urinary Bladder Cancer[accessedResource: MSH:D001749][accessDate: 04-11-2010]
Cancer, Bladder[accessedResource: MSH:D001749][accessDate: 04-11-2010]
Tumour of urinary bladder[accessedResource: SNOMEDCT:126885006][accessDate: 04-11-2010]
URINARY BLADDER NEOPL
Cancer of the Bladder[accessedResource: MSH:D001749][accessDate: 04-11-2010]
Neoplasm of Urinary Bladder
BLADDER NEOPL
Neoplasm, Bladder[accessedResource: MSH:D001749][accessDate: 04-11-2010]
GeneRIF:12926071
Bladder Neoplasms[accessedResource: MSH:D001749][accessDate: 04-11-2010]
Neoplasm of bladder (disorder)[accessedResource: SNOMEDCT:126885006][accessDate: 04-11-2010]
Tumors or cancer of the URINARY BLADDER.[accessedResource: MSH:D001749][accessDate: 04-11-2010]
GeneRIF:15541380
bladder tumor
Tumors, Bladder
DOID:5428
NGB - New growth of bladder
GeneRIF:15122326
Tumor of the Urinary Bladder
Neoplasm of the Urinary Bladder[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
An abdominal cancer and bladder disease and urologic neoplasm that results_in malignant growth located_in the urinary bladder.[accessedResource: DOID:5428][accessDate: 04-11-2010]
MSH:D001749
Bladder Cancers
GeneRIF:11888683
GeneRIF:12202941
GeneRIF:12783123
Urinary Bladder Tumors[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
SNOMEDCT:126885006
Urinary Bladder Tumors
Bladder Tumors[accessedResource: MSH:D001749][accessDate: 04-11-2010]
Tumor of Urinary Bladder[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
Neoplasm of the Urinary Bladder
A benign or malignant, primary or metastatic neoplasm of the bladder. - 2003
NEOPL BLADDER[accessedResource: MSH:D001749][accessDate: 04-11-2010]
Neoplasm of the Bladder
Tumor of Bladder[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
GeneRIF:15273729
Urinary Bladder Tumor[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
Tumor of Bladder
URINARY BLADDER NEOPL[accessedResource: MSH:D001749][accessDate: 04-11-2010]
Urinary Bladder Neoplasms[accessedResource: MSH:D001749][accessDate: 04-11-2010]
NCIt:C2901
Tumor of the Urinary Bladder[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
Tumor of the Bladder
Tumor of Urinary Bladder
Urinary Bladder Neoplasm
Tumor of the Bladder[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
Tumors or cancer of the URINARY BLADDER.
GeneRIF:15215162
Neoplasm of Bladder
Urinary Bladder Tumor
GeneRIF:12853839
Neoplasm of bladder[accessedResource: SNOMEDCT:126885006][accessDate: 04-11-2010]
Bladder Cancer
GeneRIF:12115506
Cancer of Bladder[accessedResource: MSH:D001749][accessDate: 04-11-2010]
Urinary Bladder Cancer
Neoplasms, Bladder
Cancer of Bladder
Neoplasm of the Bladder[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
Neoplasm of Urinary Bladder[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
Tumour of urinary bladder
GeneRIF:12820330
Urinary Bladder Neoplasms
Urinary Bladder Neoplasm[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
Bladder Neoplasm
BTO:0001639
Any small part of the embryo or adult metazoon more or less resembling the bud of a plant and presumed to have potential for growth and differentiation.[accessedResource: BTO:0001639][accessDate: 04-11-2010]
James Malone
PO:0000055
MAT:0000229
bud
Any small part of the embryo or adult metazoon more or less resembling the bud of a plant and presumed to have potential for growth and differentiation.
A carcinoma arising from the epithelium of the renal parenchyma (renal cell carcinoma) or the renal pelvis (renal pelvis carcinoma). The vast majority of renal cell carcinomas are adenocarcinomas. The vast majority of renal pelvis carcinomas are transitional cell carcinomas. Renal carcinomas usually affect middle aged and elderly adults. Hematuria, abdominal pain, and a palpable mass are common symptoms. -- 2004[accessedResource: NCIt:C9384][accessDate: 04-11-2010]
Kidney Carcinoma[accessedResource: NCIt:C9384][accessDate: 04-11-2010]
renal carcinoma
A carcinoma arising from the epithelium of the renal parenchyma (renal cell carcinoma) or the renal pelvis (renal pelvis carcinoma). The vast majority of renal cell carcinomas are adenocarcinomas. The vast majority of renal pelvis carcinomas are transitional cell carcinomas. Renal carcinomas usually affect middle aged and elderly adults. Hematuria, abdominal pain, and a palpable mass are common symptoms. -- 2004
NCIt:C9384
Tomasz Adamusiak
Renal Cancer
Kidney Cancer
Kidney Cancer[accessedResource: NCIt:C9384][accessDate: 04-11-2010]
Kidney Carcinoma
Renal Cancer[accessedResource: NCIt:C9384][accessDate: 04-11-2010]
MO_914
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#imprinting_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#imprinting_design[accessedResource: MO_914][accessDate: 04-11-2010]
imprinting design
Tomasz Adamusiak
acute hypotension
James Malone
Ele Holloway
Synonym with mouth, use mouth instead see: EFO_0000825
Head and Neck, Buccal Cavity
Buccal Cavity
Oral
Cavity of mouth
Oral[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
The cavity located at the upper end of the alimentary canal, behind the teeth and gums that is bounded on the outside by the lips, above by the hard and soft palates and below by the tongue.
FMA:20292
NCIt:C12421
Orally
Head and Neck, Buccal Cavity[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
Mouth[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
obsolete_oral cavity
Orally[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
true
Oral cavity[accessedResource: FMA:20292][accessDate: 10-05-2010]
1.8
James Malone
Cavity of mouth[accessedResource: FMA:20292][accessDate: 10-05-2010]
Mouth
Oral cavity
Buccal Cavity[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
The cavity located at the upper end of the alimentary canal, behind the teeth and gums that is bounded on the outside by the lips, above by the hard and soft palates and below by the tongue.[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
BTO:0001464
wing imaginal disc
The entire dorsal mesothoracic disc (wing, notal, and pleural parts), in the larval stage of Drosophila.
wing imaginal disc[accessedResource: BTO:0001464][accessDate: 04-11-2010]
The entire dorsal mesothoracic disc (wing, notal, and pleural parts), in the larval stage of Drosophila.[accessedResource: BTO:0001464][accessDate: 04-11-2010]
wing disc
James Malone
Insulin-Producing Neoplasm of Islet Cells
Insulin-Producing Tumor of the Islet Cells
James Malone
Pancreatic Insulin Producing Neoplasm[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
A benign tumor of the PANCREATIC BETA CELLS. Insulinoma secretes excess INSULIN resulting in HYPOGLYCEMIA.
Insulinoma NOS (morphologic abnormality)
DOID:3903
Pancreatic Beta Cell Tumor
GeneRIF:14602773
Insulinomas[accessedResource: MSH:D007340][accessDate: 04-11-2010]
Beta Cell Tumor of the Pancreas[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Insulinomas
Tumors, beta-Cell[accessedResource: MSH:D007340][accessDate: 04-11-2010]
SNOMEDCT:134154009
Beta Cell Tumor of Pancreas[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
GeneRIF:14656003
GeneRIF:12475221
Adenomas, beta-Cell[accessedResource: MSH:D007340][accessDate: 04-11-2010]
Insulinoma (morphologic abnormality)
Beta Cell Neoplasm of Pancreas
Insulin-Producing Neoplasm of Islet Cells[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Insulin-Producing Neoplasm of the Islet Cells
[M]Insulinoma NOS[accessedResource: SNOMEDCT:134154009][accessDate: 04-11-2010]
[M]Insulinoma NOS
GeneRIF:11986368
Insulinoma NOS (morphologic abnormality)[accessedResource: DOID:3903][accessDate: 04-11-2010]
Pancreatic Insulin Producing Neoplasm
Insulin-Producing Islet Cell Neoplasm
Beta Cell Tumor of Pancreas
Insulin-Producing Islet Cell Tumor
Insulinoma (disorder)
Beta Cell Neoplasm of the Pancreas[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Insulin-Producing Islet Cell Tumor[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Adenoma, beta-Cell
insulinoma
Insulomas
Adenoma, beta Cell[accessedResource: MSH:D007340][accessDate: 04-11-2010]
Insulomas[accessedResource: MSH:D007340][accessDate: 04-11-2010]
[M]Insulinoma NOS (morphologic abnormality)
Beta Cell Neoplasm
Insulin-Producing Tumor of the Islet Cells[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Beta Cell Neoplasm[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Insuloma[accessedResource: MSH:D007340][accessDate: 04-11-2010]
Insulin-Producing Tumor of Islet Cells
A benign tumor of the PANCREATIC BETA CELLS. Insulinoma secretes excess INSULIN resulting in HYPOGLYCEMIA.[accessedResource: MSH:D007340][accessDate: 04-11-2010]
beta-Cell Adenomas
A usually benign, well circumscribed neoplasm arising from the beta cells of the pancreas. Patients exhibit symptoms related to hypoglycemia due to inappropriate secretion of insulin.
NCIt:C3140
Pancreatic Beta Cell Tumor[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Insulin-Producing tumor of Islet cells[accessedResource: DOID:3903][accessDate: 04-11-2010]
Insulinoma (morphologic abnormality)[accessedResource: SNOMEDCT:25324008][accessDate: 04-11-2010]
Pancreatic Insulin Producing Tumor[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
GeneRIF:12688630
Insulinoma, NOS
A usually benign, well circumscribed neoplasm arising from the beta cells of the pancreas. Patients exhibit symptoms related to hypoglycemia due to inappropriate secretion of insulin.[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Beta Cell Neoplasm of Pancreas[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Insulin-Producing Neoplasm of the Islet Cells[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Beta Cell Tumor of the Pancreas
SNOMEDCT:25324008
Insulin-Producing Islet Cell Neoplasm[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Tumors, beta-Cell
Pancreatic Insulin Producing Tumor
Beta Cell Neoplasm of the Pancreas
Insulinoma, NOS[accessedResource: SNOMEDCT:25324008][accessDate: 04-11-2010]
Insuloma
MSH:D007340
Tumor, beta-Cell
Insulinoma (disorder)[accessedResource: DOID:3903][accessDate: 04-11-2010]
[M]Insulinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:134154009][accessDate: 04-11-2010]
SNOMEDCT:302822000
GeneRIF:15060136
GeneRIF:12417605
beta Cell Tumor[accessedResource: MSH:D007340][accessDate: 04-11-2010]
RGD:1358153
Copenhagen
James Malone
dopaminergic antagonists
A drug that binds to but does not activate dopamine receptors, thereby blocking the actions of dopamine or exogenous agonists.
dopamine receptor antagonist
James Malone
http://www.ebi.ac.uk/efo/EFO_0001879
CHEBI:48561
dopamine blocker
dopaminergic antagonist
dopamine antagonist
large intestine
TGMA:0001020
MAT:0000046
Large bowel
Large bowel[accessedResource: FMAID:7201][accessDate: 04-11-2010]
EMAPA:19252
adult hindgut
The hindgut of adult mosquito consists of pyloric chamber, anterior intestine, rectum, anal canal and anus.
XAO:0000131
hindgut
posterior intestine[accessedResource: ZFA:0000706][accessDate: 04-11-2010]
SAEL:58
adult hindgut[accessedResource: TGMA:0001020][accessDate: 04-11-2010]
ZFA:0000706
BTO:0000706
posterior intestine
hindgut[accessedResource: MAT:0000046][accessDate: 04-11-2010]
MA:0000333
The hindgut of adult mosquito consists of pyloric chamber, anterior intestine, rectum, anal canal and anus.[accessedResource: TGMA:0001020][accessDate: 04-11-2010]
EV:0100077
The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates.
James Malone
The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates.[accessedResource: ZFA:0000706][accessDate: 04-11-2010]
The more terminal division of the vertebrate intestine that is wider and shorter than the small intestine, typically divided into cecum, colon, and rectum, and concerned especially with the resorption of water and the formation of feces.[accessedResource: BTO:0000706][accessDate: 04-11-2010]
The more terminal division of the vertebrate intestine that is wider and shorter than the small intestine, typically divided into cecum, colon, and rectum, and concerned especially with the resorption of water and the formation of feces.
Organ with organ cavity which is continuous proximally with the small intestine and distally with the anal canal. Examples: There is only large intestine.
FMAID:7201
A human embryonic stem cell line
BG03
MO_189
Is an information entity about the material's (i.e., the patient's) medical record as background information relevant to the experiment.
clinical history
Tomasz Adamusiak
Jie Zheng
James Malone
HapMap haplotype mapping
James Malone
SUM159PT
NCI-H508
James Malone
Ele Holloway
MAT:0000222
The main root of a plant, usually stouter than the lateral roots and growing straight downward from the stem.
primary root[accessedResource: MAT:0000222][accessDate: 04-11-2010]
The main root of a plant, usually stouter than the lateral roots and growing straight downward from the stem.[accessedResource: BTO:0002615][accessDate: 04-11-2010]
BTO:0002615
James Malone
ZEA:0015061
primary root
taproot
http://www.ebi.ac.uk/efo/EFO_0001540
InChIKey=VWUXBMIQPBEWFH-LQKBAPIOBA
[H][C@]12CC[C@]3(C)[C@@H](O)CC[C@@]3([H])C1[C@H](CCCCCCCCCS(=O)CCCC(F)(F)C(F)(F)F)Cc4cc(O)ccc24
C32H47F5O3S
James Malone
CHEBI:31638
A 3-hydroxy steroid that has formula C32H47F5O3S.
7alpha-{9-[(4,4,5,5,5-pentafluoropentyl)sulfinyl]nonyl}estra-1(10),2,4-triene-3,17beta-diol
InChI=1/C32H47F5O3S/c1-30-17-15-26-25-12-11-24(38)21-23(25)20-22(29(26)27(30)13-14-28(30)39)10-7-5-3-2-4-6-8-18-41(40)19-9-16-31(33,34)32(35,36)37/h11-12,21-22,26-29,38-39H,2-10,13-20H2,1H3/t22-,26-,27+,28+,29?,30+,41?/m1/s1
fulvestrant
ZFS:0000017
gastrula 50%-epiboly
James Malone
PO:0004525
MAT:0000365
wood parenchyma
OntologyMappingImporter following MAT:0000365
James Malone
James Malone
FBbt:00005786
There are five Malpighian tubules that are attached to the alimentary canal posteriorly.[accessedResource: TGMA:0001038][accessDate: 04-11-2010]
adult Malpighian tubule[accessedResource: FBbt:00005725][accessDate: 04-11-2010]
malphigian tube[accessedResource: BTO:0000810][accessDate: 04-11-2010]
The most important structure of the insect's excretory organ, which may comprise cystiform or labyrinthine highly versatile tubules having their outlet into the initial section of the rectum.[accessedResource: FBbt:00005786][accessDate: 04-11-2010]
Any of a group of long blind vessels opening into the posterior part of the alimentary canal in most insects and some other arthropods and functioning primarily as excretory organs.[accessedResource: BTO:0000810][accessDate: 04-11-2010]
Malpighian tubule
MAT:0000123
The most important structure of the insect's excretory organ, which may comprise cystiform or labyrinthine highly versatile tubules having their outlet into the initial section of the rectum.
Malpighian tubules
There are five Malpighian tubules that are attached to the alimentary canal posteriorly.
FBbt:00005725
TGMA:0001038
BTO:0000810
adult Malpighian tubules
TADS:0000163
adult Malpighian tubule
malphigian tube
Any of a group of long blind vessels opening into the posterior part of the alimentary canal in most insects and some other arthropods and functioning primarily as excretory organs.
Malpighian tubules[accessedResource: MAT:0000123][accessDate: 04-11-2010]
adult Malpighian tubules[accessedResource: TGMA:0001038][accessDate: 04-11-2010]
lung cancer cell line
Ventral tegmental nucleus of Tsai
James Malone
Ventral tegmental area of Tsai
Ventral tegmental nucleus (Tsai)
Ventral tegmental area of Tsai[accessedResource: FMA:72438][accessDate: 04-11-2010]
FMA:72438
ventral tegmental
Ventral tegmental nucleus of Tsai[accessedResource: FMA:72438][accessDate: 04-11-2010]
Ventral tegmental nucleus (Tsai)[accessedResource: FMA:72438][accessDate: 04-11-2010]
ventral tegmental area
mutagenos
An agent that increases the frequency of spontanenous mutation, usually by interacting directly with DNA and causing it damage, including base substitution.
CHEBI:25435
mutagenes
James Malone
mutagene
mutageno
http://www.ebi.ac.uk/efo/EFO_0001828
mutagen
mutagenic agent
mutagens
molecular oxygen
dioxygene
dioxygen
InChIKey=MYMOFIZGZYHOMD-UHFFFAOYAM
http://www.ebi.ac.uk/efo/EFO_0002675
O=O
Disauerstoff
InChI=1/O2/c1-2
oxygen
CHEBI:15379
OXYGEN MOLECULE
O2
A homoatomic molecule that has formula O2.
O(2)
NCI-H1930
James Malone
Ele Holloway
chronic myeloproliferative disorder
Tomasz Adamusiak
James Malone
RGD:737932
Lewis
James Malone
Human T cell leukemia, established from the peripheral blood of a 14-year-old boy with acute lymphoblastic leukemia (ALL) at first relapse in 1976; often this cell line is called "JM (JURKAT and JM are derived from the same patient and are sister clones), occasionally JM may be a subclone with somewhat divergent features.[accessedResource: BTO:0000661][accessDate: 04-11-2010]
James Malone
Natural Language Generator 8th April 2010
A Jurkat is a cell line.
A Jurkat is all of the following: something that is bearer of a T cell acute lymphoblastic leukemia, something
that derives from a homo sapiens, and something that derives from a T cell.
JM cell[accessedResource: BTO:0000661][accessDate: 04-11-2010]
JURKAT cell[accessedResource: BTO:0000661][accessDate: 04-11-2010]
JURKAT cell
Jurkat
Ele Holloway
JM cell
JM
BTO:0000661
Human T cell leukemia, established from the peripheral blood of a 14-year-old boy with acute lymphoblastic leukemia (ALL) at first relapse in 1976; often this cell line is called "JM (JURKAT and JM are derived from the same patient and are sister clones), occasionally JM may be a subclone with somewhat divergent features.
InChI=1/C16H15ClN4O2/c1-19-12(8-7-10-5-4-6-11(17)9-10)18-14-13(19)15(22)21(3)16(23)20(14)2/h4-9H,1-3H3/b8-7+
8-(3-chlorostyryl) caffeine
CSC
C16H15ClN4O2
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0002490
8-[(E)-2-(3-chlorophenyl)ethenyl]-1,3,7-trimethyl-3,7-dihydro-1H-purine-2,6-dione
CHEBI:53115
InChIKey=WBWFIUAVMCNYPG-BQYQJAHWBU
James Malone
Caffeine substituted at its 8-position by an (E)-3-chlorostyryl group.
Cn1c(\\C=C\\c2cccc(Cl)c2)nc2n(C)c(=O)n(C)c(=O)c12
8-CSC
1,3,7-trimethyl-8-(3-chlorostyryl)xanthine
SKOV3
James Malone
Ele Holloway
http://jaxmice.jax.org/strain/009268.html
ILSXISS41/TejJ
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001877
CHEBI:48358
polar aprotic solvent
James Malone
FBbt:00005832
A0dorEC
A0dorEC[accessedResource: FBbt:00005832][accessDate: 04-11-2010]
dorsal ectoderm anlage in statu nascendi
James Malone
http://www.ebi.ac.uk/efo/EFO_0000628
James Malone
Jie Zheng
Tomasz Adamusiak
nutrients
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#nutrients[accessedResource: MO_867][accessDate: 04-11-2010]
MO_867
The food provided to the organism (e.g., chow, fertilizer, DEMM 10%FBS, etc.).
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#nutrients
this should become a quality of a material i think
A nutrient is a chemical element needed by all life forms.
nutrient
chow, fertilizer, DEMM 10%FBS
An assay in which the methylation state of DNA is determined and is compared between samples using array technology
methylation profiling by array
Kobalt chlorid
cobalt(II) chloride
InChIKey=GVPFVAHMJGGAJG-ARVHXSLACZ
cobaltous chloride
cobaltous chloride anhydrous
http://www.ebi.ac.uk/efo/EFO_0001511
dichlorocobalt
cobaltous dichloride
Kobalt(II)-chlorid
cobalt muriate
cobalt chloride
CoCl2
cobalt dichloride
CHEBI:35696
Chloride of cobalt in which the metal is in the +2 oxidation state.
Kobaltdichlorid
[Cl-].[Cl-].[Co++]
cobalt(2+) chloride
Cl2Co
InChI=1/2ClH.Co/h2*1H;/q;;+2/p-2/f2Cl.Co/h2*1h;/q2*-1;m
Meningitis of unspecified cause[accessedResource: DOID:9471][accessDate: 04-11-2010]
Meningitis (disorder)[accessedResource: DOID:9471][accessDate: 04-11-2010]
Meningitis (disorder)
meningitis due to organism[accessedResource: DOID:9471][accessDate: 04-11-2010]
Meningitis of unspecified cause
Unspecified meningitis (disorder)
GeneRIF:12707352
Meningitis of unspecified cause (disorder)
MENINGITIS NOS
Unspecified meningitis[accessedResource: SNOMEDCT:192681009][accessDate: 04-11-2010]
Meningitis is a nervous system infectious disease characterized as an inflammation of the pia-arachnoid meninges. It can be caused by growth of bacteria, fungi, or parasites within the subarachnoid space or by the growth of bacteria or viruses within the meningeal or ependymal cells. Meningitis is a diffuse infection caused by a variety of different agents.[accessedResource: DOID:9471][accessDate: 04-11-2010]
A disorder characterized by acute inflammation of the meninges of the brain and/or spinal cord.[accessedResource: NCIt:C26828][accessDate: 04-11-2010]
SNOMEDCT:7180009
Meningitis is a nervous system infection characterized as an inflammation of the pia-arachnoid meninges. It can be caused by growth of bacteria, fungi, or parasites within the subarachnoid space or by the growth of bacteria or viruses within the meningeal or ependymal cells. Meningitis is a diffuse infection caused by a variety of different agents.
Meningitis of unspecified cause (disorder)[accessedResource: SNOMEDCT:192678004][accessDate: 04-11-2010]
Pachymeningitis
Inflammation of the coverings of the brain and/or spinal cord, which consist of the PIA MATER; ARACHNOID; and DURA MATER. Infections (viral, bacterial, and fungal) are the most common causes of this condition, but subarachnoid hemorrhage (HEMORRHAGES, SUBARACHNOID), chemical irritation (chemical MENINGITIS), granulomatous conditions, neoplastic conditions (CARCINOMATOUS MENINGITIS), and other inflammatory conditions may produce this syndrome. (From Joynt, Clinical Neurology, 1994, Ch24, p6)[accessedResource: MSH:D008581][accessDate: 04-11-2010]
A disorder characterized by acute inflammation of the meninges of the brain and/or spinal cord.
ICD9:322.9
Meningitis is a nervous system infectious disease characterized as an inflammation of the pia-arachnoid meninges. It can be caused by growth of bacteria, fungi, or parasites within the subarachnoid space or by the growth of bacteria or viruses within the meningeal or ependymal cells. Meningitis is a diffuse infection caused by a variety of different agents.
Unspecified meningitis (disorder)[accessedResource: DOID:9471][accessDate: 04-11-2010]
Pachymeningitides
Meningitides
MENINGITIS NOS[accessedResource: ICD9:322.9][accessDate: 04-11-2010]
Unspecified meningitis
SNOMEDCT:192678004
James Malone
GeneRIF:15449178
GeneRIF:11821235
Pachymeningitides[accessedResource: MSH:D008581][accessDate: 04-11-2010]
NCIt:C26828
Inflammation of the coverings of the brain and/or spinal cord, which consist of the PIA MATER; ARACHNOID; and DURA MATER. Infections (viral, bacterial, and fungal) are the most common causes of this condition, but subarachnoid hemorrhage (HEMORRHAGES, SUBARACHNOID), chemical irritation (chemical MENINGITIS), granulomatous conditions, neoplastic conditions (CARCINOMATOUS MENINGITIS), and other inflammatory conditions may produce this syndrome. (From Joynt, Clinical Neurology, 1994, Ch24, p6)
Pachymeningitis[accessedResource: MSH:D008581][accessDate: 04-11-2010]
DOID:9471
meningitis
Meningitides[accessedResource: MSH:D008581][accessDate: 04-11-2010]
MSH:D008581
meningitis due to organism
ICD9:322
GeneRIF:12198614
SNOMEDCT:192681009
James Malone
UACC812
HEC-1-B
HEC1B
James Malone
Ele Holloway
LS174T
James Malone
Ele Holloway
Seminoma of Testis[accessedResource: NCIt:C7328][accessDate: 04-11-2010]
Seminoma of the Testis[accessedResource: NCIt:C7328][accessDate: 04-11-2010]
testicular seminoma
Seminoma of Testis
Testicular Seminoma Pure
Testicular Seminoma Pure[accessedResource: NCIt:C7328][accessDate: 04-11-2010]
Tomasz Adamusiak
NCIt:C7328
A malignant germ cell tumor arising from the testis. It is believed that it is derived from the sexually undifferentiated embryonic gonad. Treatment with radiotherapy is highly successful when the tumor is diagnosed in localized stages, which represents the majority of presentations of seminoma.[accessedResource: NCIt:C7328][accessDate: 04-11-2010]
Seminoma of the Testis
A malignant germ cell tumor arising from the testis. It is believed that it is derived from the sexually undifferentiated embryonic gonad. Treatment with radiotherapy is highly successful when the tumor is diagnosed in localized stages, which represents the majority of presentations of seminoma.
http://www.ebi.ac.uk/efo/EFO_0001609
InChIKey=COFLCBMDHTVQRA-DABHNVCVBQ
CHEBI:36779
c1cc2cc3ccc([nH]3)c3ccc(cc4ccc(cc5ccc(cc1n2)[nH]5)n4)[nH]3
InChI=1/C24H17N5/c1-2-16-12-18-4-6-20(27-18)14-22-8-10-24(29-22)23-9-7-21(28-23)13-19-5-3-17(26-19)11-15(1)25-16/h1-14,25,28-29H/b15-11-,16-12-,17-11-,18-12-,19-13-,20-14-,21-13-,22-14-,24-23-
C24H17N5
sapphyrin
A member of the sapphyrins that has formula C24H17N5.
A sapphyrin that has formula C24H17N5.
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#L
A volume unit which is equal to one thousandth of a cubic meter or 10^[-3] m^[3], or to 1 decimeter.
l
true
Tomasz Adamusiak
A liter is a volume unit which is equal to one thousandth of a cubic meter or 10^-3 m^3, or to 1 decimeter.
http://www.ebi.ac.uk/efo/EFO_0001713
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#L[accessedResource: MO_444][accessDate: 04-11-2010]
liter
MO_444
NCIt:C13740
Embryoblast
Embryoblast[accessedResource: NCIt:C13740][accessDate: 04-11-2010]
inner cell mass
James Malone
TAO:0000317
postcranial axia skelton[accessedResource: MAT:0000148][accessDate: 04-11-2010]
The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.[accessedResource: ZFA:0000317][accessDate: 04-11-2010]
axial skeleton[accessedResource: MAT:0000148][accessDate: 04-11-2010]
EMAPA:17214
vertebral column
ZFA:0000317
postcranial axial skeleton
*Subdivision of skeleton which consists of the bones of the vertebral column, the thoracic cage and the pelvis.
EHDAA:5049
James Malone
The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.
MA:0000308
MAT:0000148
postcranial axial skeleton[accessedResource: TAO:0000317][accessDate: 04-11-2010]
FMAID:71221
AAO:0000034
The post-cranial structural components forming the long axis of the vertebrate body; usually consists of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.
axial skeleton structure
SAEL:121
The post-cranial structural components forming the long axis of the vertebrate body; usually consists of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.[accessedResource: TAO:0000317][accessDate: 04-11-2010]
axial skeleton
vertebral column[accessedResource: MAT:0000148][accessDate: 04-11-2010]
postcranial axia skelton
Other gallbladder disorders[accessedResource: SNOMEDCT:197407006][accessDate: 04-11-2010]
[X]Other diseases of intestines (disorder)
[X]Other specified diseases of anus and rectum
[X]Other diseases of intestines
Pilosebaceous Nevoid disorder[accessedResource: DOID:27][accessDate: 04-11-2010]
Other diseases of the intestines and peritoneum (disorder)[accessedResource: SNOMEDCT:197043006][accessDate: 04-11-2010]
Other gallbladder disorders (disorder)[accessedResource: SNOMEDCT:197407006][accessDate: 04-11-2010]
Other diseases of the intestines and peritoneum (disorder)
SNOMEDCT:197407006
ICD9:569.4
nevus comedonicus (disorder)[accessedResource: DOID:27][accessDate: 04-11-2010]
Other disorders of intestine (disorder)[accessedResource: SNOMEDCT:197209006][accessDate: 04-11-2010]
Pilosebaceous Nevoid disorder
Other intestine disorders
ICD9:569.49
James Malone
SNOMEDCT:197043006
ICD9:569
ICD9:575
Other intestine disorders[accessedResource: SNOMEDCT:197209006][accessDate: 04-11-2010]
RECTAL & ANAL DIS NEC
acne nevus
SNOMEDCT:197575000
SNOMEDCT:53619000
[X]Other diseases of the digestive system
Digestive system diseases NOS[accessedResource: SNOMEDCT:197575000][accessDate: 04-11-2010]
Digestive system diseases NOS (disorder)[accessedResource: SNOMEDCT:197575000][accessDate: 04-11-2010]
SNOMEDCT:197264003
ICD9:520-579.99
Disorder of digestive system
Gastrointestinal and digestive disorder[accessedResource: SNOMEDCT:53619000][accessDate: 04-11-2010]
OTHER DISEASES OF INTESTINES AND PERITONEUM[accessedResource: ICD9:560-569.99][accessDate: 04-11-2010]
Other diseases of the intestines and peritoneum
Gastrointestinal and digestive disorder
[X]Other diseases of intestines[accessedResource: SNOMEDCT:197538005][accessDate: 04-11-2010]
[X]Other diseases of the digestive system[accessedResource: SNOMEDCT:197569009][accessDate: 04-11-2010]
ICD9:564.4
Other intestinal disorders NOS[accessedResource: SNOMEDCT:197264003][accessDate: 04-11-2010]
Other specified disorders of rectum and anus[accessedResource: ICD9:569.49][accessDate: 04-11-2010]
DISEASES OF THE DIGESTIVE SYSTEM
Other gallbladder disorders NOS (disorder)[accessedResource: SNOMEDCT:197435005][accessDate: 04-11-2010]
ICD9:560-569.99
Other intestinal disorders NOS
Digestive system diseases NOS
nevus comedonicus (disorder)
Disease of digestive system[accessedResource: SNOMEDCT:53619000][accessDate: 04-11-2010]
Disease of digestive system, NOS
Other gallbladder disorders NOS[accessedResource: SNOMEDCT:197435005][accessDate: 04-11-2010]
Other postoperative functional disorders
Disease of digestive system
Disorder of digestive system[accessedResource: SNOMEDCT:53619000][accessDate: 04-11-2010]
Other diseases of the intestines and peritoneum[accessedResource: SNOMEDCT:197043006][accessDate: 04-11-2010]
DOID:27
SNOMEDCT:197569009
[X]Other specified diseases of anus and rectum (disorder)
POSTOP GI FUNCT DIS NEC
Other disorders of intestine (disorder)
OTHER DISEASES OF INTESTINES AND PERITONEUM
Other intestinal disorders NOS (disorder)
digestive system disease
ICD9:570-579.99
Other intestinal disorders NOS (disorder)[accessedResource: SNOMEDCT:197264003][accessDate: 04-11-2010]
DISEASES OF THE DIGESTIVE SYSTEM[accessedResource: ICD9:520-579.99][accessDate: 04-11-2010]
Other gallbladder disorders
Disease of digestive system (disorder)
Digestive system diseases NOS (disorder)
Disorder of digestive system (disorder)[accessedResource: SNOMEDCT:53619000][accessDate: 04-11-2010]
OTHER DISEASES OF DIGESTIVE SYSTEM
Other gallbladder disorders NOS (disorder)
Disorder of digestive system (disorder)
Functional digestive disorders, not elsewhere classified[accessedResource: ICD9:564][accessDate: 04-11-2010]
GIT diseases[accessedResource: SNOMEDCT:53619000][accessDate: 04-11-2010]
Other disorders of gallbladder
OTHER DISEASES OF DIGESTIVE SYSTEM[accessedResource: ICD9:570-579.99][accessDate: 04-11-2010]
Other disorders of gallbladder[accessedResource: ICD9:575][accessDate: 04-11-2010]
POSTOP GI FUNCT DIS NEC[accessedResource: ICD9:564.4][accessDate: 04-11-2010]
Other postoperative functional disorders[accessedResource: ICD9:564.4][accessDate: 04-11-2010]
acne nevus[accessedResource: DOID:27][accessDate: 04-11-2010]
Other specified disorders of rectum and anus
[X]Other diseases of the digestive system (disorder)
SNOMEDCT:197209006
Disease of digestive system, NOS[accessedResource: SNOMEDCT:53619000][accessDate: 04-11-2010]
GIT diseases
[X]Other specified diseases of anus and rectum (disorder)[accessedResource: SNOMEDCT:197543003][accessDate: 04-11-2010]
SNOMEDCT:197543003
Other gallbladder disorders (disorder)
SNOMEDCT:197538005
[X]Other specified diseases of anus and rectum[accessedResource: SNOMEDCT:197543003][accessDate: 04-11-2010]
Disease of digestive system (disorder)[accessedResource: SNOMEDCT:53619000][accessDate: 04-11-2010]
Other disorders of intestine
ICD9:564
Other disorders of intestine[accessedResource: ICD9:569][accessDate: 04-11-2010]
[X]Other diseases of the digestive system (disorder)[accessedResource: SNOMEDCT:197569009][accessDate: 04-11-2010]
RECTAL & ANAL DIS NEC[accessedResource: ICD9:569.49][accessDate: 04-11-2010]
SNOMEDCT:197435005
[X]Other diseases of intestines (disorder)[accessedResource: SNOMEDCT:197538005][accessDate: 04-11-2010]
Other gallbladder disorders NOS
Functional digestive disorders, not elsewhere classified
FMAID:3866
Proximal portion of anterior descending branch of left coronary artery
Proximal portion of anterior descending branch of left coronary artery[accessedResource: FMAID:3866][accessDate: 04-11-2010]
proximal portion of anterior interventricular branch of left coronary artery
Tomasz Adamusiak
Jie Zheng
James Malone
FMAID:7209
TADS:0000400
ZFA:0000403
TAO:0000403
ovary
FBbt:00004865
Female reproductive organ.
ovaries[accessedResource: ZFA:0000403][accessDate: 04-11-2010]
animal ovary
AAO:0000371
Female reproductive organ.[accessedResource: ZFA:0000403][accessDate: 04-11-2010]
SAEL:76
MA:0000384
MAT:0000125
EMAPA:17962
Ovary[accessedResource: FMAID:7209][accessDate: 04-11-2010]
XAO:0000258
EV:0100111
ovaries
EHDAA:8124
GM11993
James Malone
GM12156
James Malone
time
James Malone
A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland. Kimmel et al, 1995.
ZFA:0000026
James Malone
TAO:0000026
hgg
hatching gland
A transversely oriented set of cells located deep to the enveloping layer on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland;The fish hatching gland is a unicellular holocrine gland. Although it has recently been found that the precursors or immature forms of the gland cells considerably migrate in the embryonic body during development (see later), the final location of the hatching gland cells in fish is generally restricted to anterior and/or dorsal regions of a well-grown prehatching embryo. In medaka, the final location is somewhat unique: The giant gland cells are mostly localized in the inner surface of the buccal (or pharyngeal) cavity.
MAT:0000180
hgg[accessedResource: ZFA:0000026][accessDate: 04-11-2010]
A transversely oriented set of cells located deep to the enveloping layer on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland;The fish hatching gland is a unicellular holocrine gland. Although it has recently been found that the precursors or immature forms of the gland cells considerably migrate in the embryonic body during development (see later), the final location of the hatching gland cells in fish is generally restricted to anterior and/or dorsal regions of a well-grown prehatching embryo. In medaka, the final location is somewhat unique: The giant gland cells are mostly localized in the inner surface of the buccal (or pharyngeal) cavity.[accessedResource: BTO:0000558][accessDate: 04-11-2010]
BTO:0000558
A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland.
A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland.[accessedResource: ZFA:0000026][accessDate: 04-11-2010]
A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland. Kimmel et al, 1995.[accessedResource: TAO:0000026][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0002093
A loess transformation is a data transformation that takes as input a collection of real number pairs (x, y) and, after performing (one or more) loess fittings, utilizes the resulting curves to transform each (x, y) in the input into (x, y-f(x)) where f(x) is one of the fitted curves.
loess transformation
James Malone
MA:0001245
corneal stroma
James Malone
Ele Holloway
CHEBI:39352
C6H4N2O5
http://www.ebi.ac.uk/efo/EFO_0001524
dinitrophenol
primary myelofibrosis
Tomasz Adamusiak
James Malone
SW962
James Malone
Ele Holloway
JVM3
James Malone
Ele Holloway
Human Skeletal Muscle Cells
SKMC
A cell derived from a promyelocyte. It differentiates into a metamyelocyte. It has a diameter of 10-18 micrometer, and an oval or round nucleus with finely granulated chromatin.[accessedResource: NCIt:C13115][accessDate: 04-11-2010]
A cell derived from a promyelocyte. It differentiates into a metamyelocyte. It has a diameter of 10-18 micrometer, and an oval or round nucleus with finely granulated chromatin.
Tomasz Adamusiak
A cell type that is the first of the maturation stages of the granulocytic leukocytes normally found in the bone marrow. Granules are seen in the cytoplasm. The nuclear material of the myelocyte is denser than that of the myeloblast but lacks a definable membrane. The cell is flat and contains increasing numbers of granules as maturation progresses.
A cell type that is the first of the maturation stages of the granulocytic leukocytes normally found in the bone marrow. Granules are seen in the cytoplasm. The nuclear material of the myelocyte is denser than that of the myeloblast but lacks a definable membrane. The cell is flat and contains increasing numbers of granules as maturation progresses.[accessedResource: CL:0002193][accessDate: 04-11-2010]
CL:0002193
NCIt:C13115
myelocyte
Jie Zheng
MO_808
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ex_vivo_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ex_vivo_design[accessedResource: MO_808][accessDate: 04-11-2010]
ex vivo design
Tomasz Adamusiak
The murine MIN6 cell line derived from in vivo immortalized insulin-secreting pancreatic beta cells.
MIN-6 cell
Natural Language Generator 8th April 2010
The murine MIN6 cell line derived from in vivo immortalized insulin-secreting pancreatic beta cells.[accessedResource: BTO:0002284][accessDate: 04-11-2010]
A MIN6 is a cell line.
A MIN6 derives from a mus musculus.
Ele Holloway
James Malone
MIN6
MIN6 cell
BTO:0002284
MIN-6 cell[accessedResource: BTO:0002284][accessDate: 04-11-2010]
MIN6 cell[accessedResource: BTO:0002284][accessDate: 04-11-2010]
true
http://www.ebi.ac.uk/efo/EFO_0000745
An obsolete class is any class which is no longer required in the ontology but is maintained within the ontology file so that an audit trail exists for legacy reasons. Obsolete class and its children is disjoint with the main body of the ontology.
obsolete class
DoTc2 4510
DoTc2
James Malone
Ele Holloway
HCC1171
James Malone
Gastric Antrum[accessedResource: NCIt:C12259][accessDate: 04-11-2010]
Tomasz Adamusiak
Jie Zheng
The initial part of the pyloric canal of the stomach. This site contains endocrine cells that produce gastrin and somatostatin.
Gastric Antrum
pyloric antrum
Antrum Pylori
Antrum Pylori[accessedResource: NCIt:C12259][accessDate: 04-11-2010]
The initial part of the pyloric canal of the stomach. This site contains endocrine cells that produce gastrin and somatostatin.[accessedResource: NCIt:C12259][accessDate: 04-11-2010]
NCIt:C12259
MO_109
IAO_0000010
software
Tomasz Adamusiak
Jie Zheng
MESSA
James Malone
Ele Holloway
FBbt:00005498
P1 ParMus
P1 ParMus[accessedResource: FBbt:00005498][accessDate: 04-11-2010]
dorsal pharyngeal muscle primordium
James Malone
muriate of potash
Monopotassium chloride
A metal chloride salt with a K(+) counterion.
[Cl-].[K+]
Ele Holloway
InChI=1/ClH.K/h1H;/q;+1/p-1/fCl.K/h1h;/q-1;m
potassium chloride
Klotrix
sylvite
[KCl]
http://www.ebi.ac.uk/efo/EFO_0002418
Kaon-Cl 10
Kaliumchlorid
CHEBI:32588
Klor-con
James Malone
InChIKey=WCUXLLCKKVVCTQ-UHVCZDMOCF
An inorganic chloride salt that has formula ClK.
true
UO:0000034
http://www.ebi.ac.uk/efo/EFO_0001788
A week is a derived time unit which is equal to 7 days.
A time unit which is equal to 7 days.
week
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158894&type=germplasm
CS57870 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158894&type=germplasm
CS57870
James Malone
NCI-H1155
James Malone
Ele Holloway
JM1
James Malone
Ele Holloway
methanol
The simplest aliphatic alcohol, comprising a methyl and an alcohol group.
wood naphtha
MeOH
InChI=1/CH4O/c1-2/h2H,1H3
Methylalkohol
Methyl alcohol
wood spirit
http://www.ebi.ac.uk/efo/EFO_0001672
CH3OH
CH4O
InChIKey=OKKJLVBELUTLKV-UHFFFAOYAX
CHEBI:17790
wood alcohol
James Malone
carbinol
CO
Ele Holloway
(2R)-2-amino-3-hydroxypropanoic acid
D-serine
(R)-2-amino-3-hydroxypropanoic acid
CHEBI:16523
InChIKey=MTCFGRXMJLQNBG-QKGSACKDDH
A serine that has formula C3H7NO3.
D-Serin
N[C@H](CO)C(O)=O
InChI=1/C3H7NO3/c4-2(1-5)3(6)7/h2,5H,1,4H2,(H,6,7)/t2-/m1/s1/f/h6H
http://www.ebi.ac.uk/efo/EFO_0002727
C3H7NO3
Tomasz Adamusiak
Carcinoma of cervix
Carcinoma of the Cervix
A carcinoma arising from either the exocervical squamous epithelium or the endocervical glandular epithelium. The major histologic types of cervical carcinoma are: squamous carcinoma, adenocarcinoma, adenosquamous carcinoma, adenoid cystic carcinoma and undifferentiated carcinoma.[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
cervical carcinoma (uterus)[accessedResource: DOID:2893][accessDate: 04-11-2010]
GeneRIF:16298968
Carcinoma of Uterine Cervix
GeneRIF:15856299
GeneRIF:15744560
GeneRIF:15066318
Uterine Cervix Carcinoma
GeneRIF:12894545
GeneRIF:15619642
Carcinoma of Uterine Cervix[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
GeneRIF:15736426
A carcinoma that affects the cervix uteri or cervical area.
carcinoma of cervix (disorder)[accessedResource: DOID:2893][accessDate: 04-11-2010]
Cervix Carcinoma
Cervix Uteri Carcinoma
GeneRIF:15131051
Cancer of the Uterine Cervix
GeneRIF:15001834
Cervical carcinoma may arise from either the exocervical squamous epithelium or the endocervical glandular epithelium. The major histologic types of cervical carcinoma are: squamous carcinoma, adenocarcinoma, adenosquamous carcinoma, adenoid cystic carcinoma and undifferentiated carcinoma.
SNOMEDCT:285432005
Cancer of Cervix
Cervical Cancer[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
Carcinoma of the Cervix[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
Cervix Cancer[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
GeneRIF:15816636
GeneRIF:12820323
GeneRIF:11809691
GeneRIF:12007187
GeneRIF:15047823
Cancer of Uterine Cervix
GeneRIF:16047742
Uterine Cervix Carcinoma[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
GeneRIF:12392301
Cancer of the Uterine Cervix[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
NCIt:C9039
A carcinoma arising from either the exocervical squamous epithelium or the endocervical glandular epithelium. The major histologic types of cervical carcinoma are: squamous carcinoma, adenocarcinoma, adenosquamous carcinoma, adenoid cystic carcinoma and undifferentiated carcinoma.
GeneRIF:12451999
Uterine Cervix Cancer
Cervix Cancer
Carcinoma of the Uterine Cervix[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
Cancer of the Cervix[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
A carcinoma that is located_in the cervix uteri or located_in the cervical area.
cervix carcinoma[accessedResource: DOID:2893][accessDate: 04-11-2010]
Uterine Cervix Cancer[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
cervical carcinoma
DOID:2893
carcinoma of the Cervix Uteri
GeneRIF:11920583
Cervical Cancer
Carcinoma of cervix[accessedResource: SNOMEDCT:285432005][accessDate: 04-11-2010]
Cancer of Cervix[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
GeneRIF:12893195
Carcinoma of Cervix Uteri[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
GeneRIF:12174873
A carcinoma that is located_in the cervix uteri or located_in the cervical area.[accessedResource: DOID:2893][accessDate: 04-11-2010]
Carcinoma of Cervix Uteri
GeneRIF:12057898
GeneRIF:14578179
carcinoma of cervix (disorder)
Carcinoma of the Cervix Uteri[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
Cancer of Uterine Cervix[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
GeneRIF:14584072
GeneRIF:11957139
GeneRIF:15201979
Carcinoma of the Uterine Cervix
GeneRIF:15386342
GeneRIF:15702969
James Malone
Cervix Uteri Carcinoma[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
GeneRIF:12748469
GeneRIF:11956602
cervical carcinoma (uterus)
Cancer of the Cervix
http://www.ebi.ac.uk/efo/EFO_0002396
3-isobutyl-1-methyl-7H-xanthine
1-methyl-3-(propan-2-yl)-3,7-dihydro-1H-purine-2,6-dione
CHEBI:34795
James Malone
3-isobutyl-1-methylxanthine
A 3-isobutyl-1-methylxanthine that has formula C10H14N4O2.
IBMX
3-isobutyl-1-methyl-3,7-dihydro-1H-purine-2,6-dione
1-methyl-3-isobutylxanthine
3-Isobutyl-1-methyxanthine
InChIKey=APIXJSLKIYYUKG-WXRBYKJCCL
1-methyl-3-(2-methylpropyl)-7H-purine-2,6-dione
1-methyl-3-(2-methylpropyl)-3,7-dihydro-1H-purine-2,6-dione
C10H14N4O2
CC(C)Cn1c2nc[nH]c2c(=O)n(C)c1=O
Ele Holloway
InChI=1/C10H14N4O2/c1-6(2)4-14-8-7(11-5-12-8)9(15)13(3)10(14)16/h5-6H,4H2,1-3H3,(H,11,12)/f/h11H
assay by instrument
RL
James Malone
Ele Holloway
An assay in which high throughput sequencing technology is used to analyse the microRNA component of the transcriptome.
microRNA profiling by high throughput sequencing
James Malone
Neoplatin
Platamine
H6Cl2N2Pt
InChIKey=LXZZYRPGZAFOLE-WMUYXLCICY
James Malone
Briplatin
Platinex
cis-diammineplatinum(II) dichloride
(SP-4-2)-diamminedichloridoplatinum
cis-DDP
Peyrone's chloride
A platinum-containing anticancer drug that interacts with, and forms cross-links between, DNA and proteins. It is used as a neoplasm inhibitor to treat solid tumours, primarily of the testis and ovary.
Cismaplat
cis-diamminedichloridoplatinum(II)
Cl2H6N2Pt
[H][N]([H])([H])[Pt](Cl)(Cl)[N]([H])([H])[H]
Randa
cisplatine
cis-diamminedichloroplatinum(II)
http://www.ebi.ac.uk/efo/EFO_0001507
cis-dichlorodiammineplatinum(II)
cisplatino
(SP-4-2)-diamminedichloroplatinum
InChI=1/2ClH.2H3N.Pt/h2*1H;2*1H3;/q;;;;+2/p-2/f2Cl.2H3N.Pt/h2*1h;;;/q2*-1;;;m
CHEBI:27899
cisplatinum
cis-diamminedichloroplatinum
Lederplatin
cis-[PtCl2(NH3)2]
cisplatin
Platinol
Peyrone's salt
http://www.arabidopsis.org/servlets/TairObject?id=1005158682&type=germplasm
CS57658 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158682&type=germplasm
CS57658
James Malone
as-Dimethyl sulfite
Methyl mesylate
C2H6O3S
CB1540
methyl methanesulfonate
InChI=1/C2H6O3S/c1-5-6(2,3)4/h1-2H3
Methanesulfonic acid methyl ester
COS(C)(=O)=O
http://www.ebi.ac.uk/efo/EFO_0001573
MMS
InChIKey=MBABOKRGFJTBAE-UHFFFAOYAK
A methanesulfonate ester that has formula C2H6O3S.
CHEBI:25255
MA:0000912
perirhinal cortex
James Malone
http://www.ebi.ac.uk/efo/EFO_0001874
CHEBI:48218
antiseptic drug
James Malone
A sonicator is an instrument that converts a variable electrical current to mechanical vibration of a metalic probe. The instrument is used for the lysis of cells, the mixing of compounds or solutions, or to create emulsions. [accessedResource: http://purl.obolibrary.org/obo/OBI_0400114][accessDate: 2009-08-12]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#sonicator
An instrument that converts a variable electrical current to mechanical vibration of a metallic probe. The instrument is used for the lysis of cells, the mixing of compounds or solutions, or to create emulsions.
MO_477
James Malone
sonicator
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#sonicator[accessedResource: MO_477][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0002023
2.1
true
obsolete_ChIP-seq by high throughput sequencing
Consolodated with ChiP-seq EFO_0002692
DKMG
James Malone
Ele Holloway
MO_753
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#data_analyst
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#data_analyst[accessedResource: MO_753][accessDate: 04-11-2010]
data analyst
Tomasz Adamusiak
A sudden loss of neurological function secondary to hemorrhage or ischemia in the brain parenchyma due to a vascular event.[accessedResource: NCIt:C3390][accessDate: 04-11-2010]
GeneRIF:15090053
CVA[accessedResource: NCIt:C3390][accessDate: 04-11-2010]
GeneRIF:11570818
GeneRIF:15044955
A sudden loss of neurological function secondary to hemorrhage or ischemia in the brain parenchyma due to a vascular event.
GeneRIF:12122874
GeneRIF:11926892
GeneRIF:16109906
Tomasz Adamusiak
GeneRIF:15677572
Apoplexy, Cerebrovascular
GeneRIF:15681302
Cerebrovascular Stroke[accessedResource: MSH:D020521][accessDate: 04-11-2010]
GeneRIF:15056284
CVA, CEREBROVASCULAR ACCIDENT[accessedResource: NCIt:C3390][accessDate: 04-11-2010]
GeneRIF:15277638
SNOMEDCT:270883006
GeneRIF:16165118
GeneRIF:14644079
GeneRIF:15634282
GeneRIF:16051896
GeneRIF:15910856
GeneRIF:12508918
GeneRIF:14500739
GeneRIF:16262627
Cerebrovascular Strokes
Stroke NOS (disorder)[accessedResource: SNOMEDCT:313267000][accessDate: 04-11-2010]
STROKE SYNDROME[accessedResource: NCIt:C3390][accessDate: 04-11-2010]
Stroke/CVA - undefined
Acute Strokes
A group of pathological conditions characterized by sudden, non-convulsive loss of neurological function due to BRAIN ISCHEMIA or INTRACRANIAL HEMORRHAGES. Stroke is classified by the type of tissue NECROSIS, such as the anatomic location, vasculature involved, etiology, age of the affected individual, and hemorrhagic vs. non-hemorrhagic nature. (From Adams et al., Principles of Neurology, 6th ed, pp777-810)
GeneRIF:15516929
STROKE SYNDROME
GeneRIF:12871362
CVA - Cerebrovascular accident unspecified[accessedResource: DOID:3455][accessDate: 04-11-2010]
GeneRIF:15178823
Acute Stroke[accessedResource: MSH:D020521][accessDate: 04-11-2010]
Acute Cerebrovascular Accident[accessedResource: MSH:D020521][accessDate: 04-11-2010]
Vascular Accident, Brain
GeneRIF:12598732
GeneRIF:16141422
GeneRIF:14655755
GeneRIF:15731479
NCIt:C3390
Strokes
GeneRIF:12011770
SNOMEDCT:313267000
GeneRIF:15080888
Cerebrovascular Accident, Acute
SNOMEDCT:230690007
Cerebrovascular Accident[accessedResource: MSH:D020521][accessDate: 04-11-2010]
GeneRIF:15673342
Stroke NOS (disorder)
CVA (cerebral vascular accident)
GeneRIF:14512079
GeneRIF:15725398
GeneRIF:15890883
GeneRIF:14753448
GeneRIF:15896953
GeneRIF:15159412
A sudden, nonconvulsive loss of neurologic function due to an ischemic or hemorrhagic intracranial vascular event. In general, cerebrovascular accidents are classified by anatomic location in the brain, vascular distribution, etiology, age of the affected individual, and hemorrhagic vs. nonhemorrhagic nature (MeSH).[accessedResource: NIFSTD:birnlex_12783][accessDate: 04-11-2010]
Cerebrovascular Apoplexya
GeneRIF:16085363
GeneRIF:12140663
CVA, CEREBROVASCULAR ACCIDENT
Cerebrovascular Accidents
GeneRIF:11935032
GeneRIF:12456385
GeneRIF:15613145
GeneRIF:14681304
Cerebrovascular Strokes[accessedResource: MSH:D020521][accessDate: 04-11-2010]
GeneRIF:14961162
GeneRIF:16179580
Stroke and cerebrovascular accident unspecified
NIFSTD:birnlex_12783
A sudden, nonconvulsive loss of neurologic function due to an ischemic or hemorrhagic intracranial vascular event. In general, cerebrovascular accidents are classified by anatomic location in the brain, vascular distribution, etiology, age of the affected individual, and hemorrhagic vs. nonhemorrhagic nature (MeSH).
GeneRIF:15272143
DOID:3455
GeneRIF:15891996
MSH:D020521
GeneRIF:14507642
GeneRIF:11823528
GeneRIF:14517540
GeneRIF:15567334
Stroke, Acute
GeneRIF:14753436
GeneRIF:12586134
GeneRIF:16020760
Apoplexy
GeneRIF:15640973
GeneRIF:15108283
GeneRIF:15914769
GeneRIF:16131798
CVAs (Cerebrovascular Accident)[accessedResource: MSH:D020521][accessDate: 04-11-2010]
Stroke, Cerebrovascular
CVA
Stroke and cerebrovascular accident unspecified (disorder)
GeneRIF:15701167
GeneRIF:15576653
James Malone
GeneRIF:14671240
GeneRIF:12393616
Cerebrovascular Apoplexya[accessedResource: NIFSTD:birnlex_12783][accessDate: 04-11-2010]
GeneRIF:12038800
GeneRIF:15829914
GeneRIF:15135928
Cerebrovascular accident (disorder) [Ambiguous][accessedResource: DOID:3455][accessDate: 04-11-2010]
Stroke/CVA - undefined[accessedResource: DOID:3455][accessDate: 04-11-2010]
Stroke NOS[accessedResource: SNOMEDCT:313267000][accessDate: 04-11-2010]
GeneRIF:16131797
GeneRIF:15947272
GeneRIF:15916851
GeneRIF:15935385
Apoplexy[accessedResource: NIFSTD:birnlex_12783][accessDate: 04-11-2010]
Cerebrovascular Accidents, Acute
GeneRIF:12515395
GeneRIF:15341589
Cerebrovascular accident (disorder) [Ambiguous]
GeneRIF:16051899
A sudden, nonconvulsive loss of neurologic function due to an ischemic or hemorrhagic intracranial vascular event. In general, cerebrovascular accidents are classified by anatomic location in the brain, vascular distribution, etiology, age of the affected individual, and hemorrhagic vs. nonhemorrhagic nature. (From Adams et al., Principles of Neurology, 6th ed, pp777-810)
A group of pathological conditions characterized by sudden, non-convulsive loss of neurological function due to BRAIN ISCHEMIA or INTRACRANIAL HEMORRHAGES. Stroke is classified by the type of tissue NECROSIS, such as the anatomic location, vasculature involved, etiology, age of the affected individual, and hemorrhagic vs. non-hemorrhagic nature. (From Adams et al., Principles of Neurology, 6th ed, pp777-810)[accessedResource: MSH:D020521][accessDate: 04-11-2010]
GeneRIF:11822892
GeneRIF:12006921
Stroke and cerebrovascular accident unspecified[accessedResource: SNOMEDCT:270883006][accessDate: 04-11-2010]
GeneRIF:14574075
Cerebrovascular Accidents[accessedResource: MSH:D020521][accessDate: 04-11-2010]
CVA (cerebral vascular accident)[accessedResource: DOID:3455][accessDate: 04-11-2010]
GeneRIF:15138244
Strokes[accessedResource: MSH:D020521][accessDate: 04-11-2010]
Vascular Accidents, Brain[accessedResource: MSH:D020521][accessDate: 04-11-2010]
GeneRIF:12907815
Cerebrovascular accident
GeneRIF:12464678
GeneRIF:15155526
GeneRIF:14643574
GeneRIF:12947326
Brain Vascular Accidents
Cerebrovascular accident (disorder)
Cerebrovascular accident (disorder)[accessedResource: SNOMEDCT:230690007][accessDate: 04-11-2010]
Strokes, Cerebral[accessedResource: MSH:D020521][accessDate: 04-11-2010]
Cerebral Strokes
GeneRIF:15764676
GeneRIF:14605330
GeneRIF:15861005
Vascular Accident, Brain[accessedResource: MSH:D020521][accessDate: 04-11-2010]
Acute Cerebrovascular Accidents[accessedResource: MSH:D020521][accessDate: 04-11-2010]
GeneRIF:15947254
GeneRIF:15494442
Apoplexy, Cerebrovascular[accessedResource: MSH:D020521][accessDate: 04-11-2010]
GeneRIF:15201542
GeneRIF:15623683
GeneRIF:15790561
Stroke NOS
GeneRIF:15894537
GeneRIF:15009965
GeneRIF:15456942
GeneRIF:14770184
Strokes, Acute[accessedResource: MSH:D020521][accessDate: 04-11-2010]
GeneRIF:14500938
GeneRIF:12123486
GeneRIF:12855940
GeneRIF:15232611
GeneRIF:16237435
GeneRIF:12843357
GeneRIF:15114595
GeneRIF:15116266
stroke
Stroke and cerebrovascular accident unspecified (disorder)[accessedResource: DOID:3455][accessDate: 04-11-2010]
CVAs (Cerebrovascular Accident)
GeneRIF:12695749
Stroke, Cerebral[accessedResource: MSH:D020521][accessDate: 04-11-2010]
Stroke, Cerebral
GeneRIF:16051894
CVA - Cerebrovascular accident unspecified
HCC95
James Malone
GeneRIF:15998773
GeneRIF:15126572
Papillary Thyroid Cancer
Papillary adenocarcinoma, NOS
A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. It is linked to radiation exposure and is the most common malignant thyroid lesion, comprising 75% to 80% of all thyroid cancers in iodine sufficient countries. Diagnostic procedures include: thyroid function tests, thyroid radioisotope scanning, thyroid ultrasound, and fine needle biopsy. Microscopically, the diagnosis is based on the distinct characteristics of the malignant cells, which include enlargement, oval shape, elongation, and overlapping of the nuclei. The nuclei also display clearing or have a ground glass appearance. Depending on the size and spread of the disease, surgical options include lobectomy, and partial or complete thyroidectomy. Adjuvant treatment options include: radioiodine therapy, TSH suppression and external radiation.[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
GeneRIF:11786418
GeneRIF:14584755
Papillary Cancer of the Thyroid Gland
GeneRIF:15803188
GeneRIF:12203787
Papillary adenocarcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:4797003][accessDate: 04-11-2010]
GeneRIF:15709169
NCIt:C4035
Papillary Cancer of Thyroid
A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. It is linked to radiation exposure and is the most common malignant thyroid lesion, comprising 75% to 80% of all thyroid cancers in iodine sufficient countries. Diagnostic procedures include: thyroid function tests, thyroid radioisotope scanning, thyroid ultrasound, and fine needle biopsy. Microscopically, the diagnosis is based on the distinct characteristics of the malignant cells, which include enlargement, oval shape, elongation, and overlapping of the nuclei. The nuclei also display clearing or have a ground glass appearance. Depending on the size and spread of the disease, surgical options include lobectomy, and partial or complete thyroidectomy. Adjuvant treatment options include: radioiodine therapy, TSH suppression and external radiation.
Papillary Carcinoma of the Thyroid[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
GeneRIF:16007166
Papillary thyroid carcinoma (disorder)
Papillary adenocarcinoma
Thyroid Gland Papillary Carcinoma[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
GeneRIF:15980887
GeneRIF:12964023
Papillary Carcinoma of the Thyroid Gland
Papillary adenocarcinoma[accessedResource: SNOMEDCT:4797003][accessDate: 04-11-2010]
Papillary carcinoma of thyroid[accessedResource: DOID:3969][accessDate: 04-11-2010]
GeneRIF:12640681
Papillary carcinoma of the Thyroid gland[accessedResource: DOID:3969][accessDate: 04-11-2010]
James Malone
papillary thyroid carcinoma
GeneRIF:15753666
GeneRIF:12670889
Papillary adenocarcinoma, NOS[accessedResource: SNOMEDCT:4797003][accessDate: 04-11-2010]
Papillary Carcinoma of Thyroid Gland
Papillary Carcinoma of Thyroid Gland[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
Papillary carcinoma of thyroid
GeneRIF:12819023
GeneRIF:15785240
DOID:3969
SNOMEDCT:255029007
PTC - Papillary thyroid carcinoma
GeneRIF:14568171
Papillary renal cell carcinoma
Papillary Cancer of Thyroid Gland
GeneRIF:15192042
GeneRIF:15968271
GeneRIF:12720532
GeneRIF:12140756
GeneRIF:14534696
GeneRIF:12538453
Papillary Cancer of the Thyroid
Papillary Cancer of the Thyroid[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
PTC - Papillary thyroid carcinoma[accessedResource: SNOMEDCT:255029007][accessDate: 04-11-2010]
GeneRIF:12193298
Thyroid Gland Papillary Carcinoma
Papillary Cancer of Thyroid[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
SNOMEDCT:4797003
GeneRIF:15716612
Papillary Cancer of the Thyroid Gland[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
GeneRIF:15785245
Papillary Thyroid Cancer[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
Papillary renal cell carcinoma[accessedResource: SNOMEDCT:4797003][accessDate: 04-11-2010]
GeneRIF:14761598
GeneRIF:15817909
Papillary Carcinoma of the Thyroid
Papillary adenocarcinoma (morphologic abnormality)
Papillary thyroid carcinoma (disorder)[accessedResource: DOID:3969][accessDate: 04-11-2010]
Papillary Cancer of Thyroid Gland[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
GeneRIF:14532972
GeneRIF:15277225
GeneRIF:14586073
GeneRIF:11994357
dental plate
dental plate[accessedResource: ZFA:0000644][accessDate: 04-11-2010]
FMAID:12516
XAO:0000431
EV:0100063
EHDAA:8009
MA:0000348
EMAPA:17938
SAEL:110
1: One of the hard bony appendages that are borne on the jaws or in many of the lower vertebrates on other bones in the walls of the mouth or pharynx and serve especially for the prehension and mastication of food and as weapons of offense and defense.n2: Any of various usually hard and sharp processes especially about the mouth of an invertebrate.
tooth
BTO:0000397
dental plates
1: One of the hard bony appendages that are borne on the jaws or in many of the lower vertebrates on other bones in the walls of the mouth or pharynx and serve especially for the prehension and mastication of food and as weapons of offense and defense.n2: Any of various usually hard and sharp processes especially about the mouth of an invertebrate.[accessedResource: BTO:0000397][accessDate: 04-11-2010]
Organ with a cavity which consist of dentine and enamel. Examples: incisor, molar.
James Malone
dental plates[accessedResource: ZFA:0000644][accessDate: 04-11-2010]
ZFA:0000644
NIFSTD:birnlex_535
http://www.ebi.ac.uk/efo/EFO_0002036
Drosophila melanogaster
Tomasz Adamusiak
InChIKey=PQSUYGKTWSAVDQ-ZVIOFETBBV
A pregnane-based steroidal hormone produced by the outer-section (zona glomerulosa) of the adrenal cortex in the adrenal gland, and acts on the distal tubules and collecting ducts of the kidney to cause the conservation of sodium, secretion of potassium, increased water retention, and increased blood pressure. The overall effect of aldosterone is to increase reabsorption of ions and water in the kidney.
InChI=1/C21H28O5/c1-20-7-6-13(24)8-12(20)2-3-14-15-4-5-16(18(26)10-22)21(15,11-23)9-17(25)19(14)20/h8,11,14-17,19,22,25H,2-7,9-10H2,1H3/t14-,15-,16+,17-,19+,20-,21+/m0/s1
CHEBI:27584
C21H28O5
aldosterone
(11beta)-11,21-dihydroxy-3,20-dioxopregn-4-en-18-al
[H][C@@]1(CC[C@@]2([H])[C@]3([H])CCC4=CC(=O)CC[C@]4(C)[C@@]3([H])[C@@H](O)C[C@]12C=O)C(=O)CO
http://www.ebi.ac.uk/efo/EFO_0001479
11beta,21-dihydroxy-3,20-dioxopregn-4-en-18-al
A 18-oxo steroid that has formula C21H28O5.
ZFS:0000006
cleavage 32-cell
James Malone
Adenocarcinoma of the Linitis Plastica Type[accessedResource: NCIt:C9159][accessDate: 04-11-2010]
NCIt:C9159
Diffuse Adenocarcinoma of Stomach
Diffuse Adenocarcinoma of Stomach[accessedResource: NCIt:C9159][accessDate: 04-11-2010]
Diffuse Adenocarcinoma of the Stomach[accessedResource: NCIt:C9159][accessDate: 04-11-2010]
Diffuse Stomach Adenocarcinoma[accessedResource: NCIt:C9159][accessDate: 04-11-2010]
Diffuse Stomach Adenocarcinoma
An adenocarcinoma arising from the stomach. Microscopically, it is characterized by the presence of a diffuse infiltrate, composed of individual adenocarcinoma cells or groups of adenocarcinoma cells in a fibrous or mucoid stroma. Many cells contain mucin droplets, producing a signet-ring configuration.[accessedResource: NCIt:C9159][accessDate: 04-11-2010]
diffuse gastric adenocarcinoma
Adenocarcinoma of Linitis Plastica Type[accessedResource: NCIt:C9159][accessDate: 04-11-2010]
Adenocarcinoma of the Linitis Plastica Type
James Malone
An adenocarcinoma arising from the stomach. Microscopically, it is characterized by the presence of a diffuse infiltrate, composed of individual adenocarcinoma cells or groups of adenocarcinoma cells in a fibrous or mucoid stroma. Many cells contain mucin droplets, producing a signet-ring configuration.
Diffuse Adenocarcinoma of the Stomach
Adenocarcinoma of Linitis Plastica Type
DOID:3277
Thymic tumor
Thymic tumor[accessedResource: DOID:3277][accessDate: 04-11-2010]
Tomasz Adamusiak
neoplasm of thymus (disorder)[accessedResource: DOID:3277][accessDate: 04-11-2010]
Ele Holloway
thymus neoplasm
thymic neoplasm
neoplasm of thymus (disorder)
thymic neoplasm[accessedResource: DOID:3277][accessDate: 04-11-2010]
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#International_Unit_per_Milliliter
A unit of arbitrary substance concentration (biologic activity concentration) defined as the concentration of one international unit per one milliliter of system volume.
International Unit per milliliter
http://jaxmice.jax.org/strain/009300.html
ILSXISS24/TejJ
Tomasz Adamusiak
InChI=1/C27H29NO11/c1-10-22(31)13(28)6-17(38-10)39-15-8-27(36,16(30)9-29)7-12-19(15)26(35)21-20(24(12)33)23(32)11-4-3-5-14(37-2)18(11)25(21)34/h3-5,10,13,15,17,22,29,31,33,35-36H,6-9,28H2,1-2H3/t10-,13-,15-,17-,22+,27-/m0/s1
14-hydroxydaunorubicine
http://www.ebi.ac.uk/efo/EFO_0001527
(8S-cis)-10-((3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranosyl)oxy)-7,8,9,10-tetrahydro-6,8,11-trihydroxy-8-(hydroxyacetyl)-1-methoxy-5,12-naphthacenedione
doxorubicin
doxorubicinum
doxorubicine
14-hydroxydaunomycin
COc1cccc2C(=O)c3c(O)c4C[C@](O)(C[C@H](O[C@H]5C[C@H](N)[C@H](O)[C@H](C)O5)c4c(O)c3C(=O)c12)C(=O)CO
Adriamycin
A deoxy hexoside that has formula C27H29NO11.
InChIKey=AOJJSUZBOXZQNB-TZSSRYMLBG
(1S,3S)-3-glycoloyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside
CHEBI:28748
(1S,3S)-3,5,12-trihydroxy-3-(hydroxyacetyl)-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside
C27H29NO11
NCIt:C3164
Basophilic Leukemia
An acute myeloid leukemia in which the immature cells differentiate towards basophils. This is a rare leukemia. The observed cases have been associated with a poor prognosis. The term basophilic leukemia is used as a synonym for acute basophilic leukemia. Chronic basophilic leukemia is an inappropriate term vaguely connected to the term mast cell leukemia. (WHO, 2001)
Leukemia Basophilic[accessedResource: NCIt:C3164][accessDate: 04-11-2010]
An acute myeloid leukemia in which the immature cells differentiate towards basophils. This is a rare leukemia. The observed cases have been associated with a poor prognosis. The term basophilic leukemia is used as a synonym for acute basophilic leukemia. Chronic basophilic leukemia is an inappropriate term vaguely connected to the term mast cell leukemia. (WHO, 2001)[accessedResource: NCIt:C3164][accessDate: 04-11-2010]
acute basophilic leukemia
Tomasz Adamusiak
hematolymphoid system
James Malone
XAO:0000122
hematological system[accessedResource: MAT:0000022][accessDate: 04-11-2010]
SAEL:48
hematological system
MAT:0000022
hematolymphoid system[accessedResource: MAT:0000022][accessDate: 04-11-2010]
haemopoietic system
MA:0002434
James Malone
DEL[accessedResource: ZFA:0000711][accessDate: 04-11-2010]
deep cell layer[accessedResource: ZFA:0000711][accessDate: 04-11-2010]
DEL
A multilayer of deep cells of fairly uniform thickness that forms during early epiboly (at dome stage; upon conversion of the blastodisc to the blastoderm); during gastrulation the DEL (deep cell layer) gives rise to the epiblast and hypoblast.
ZFA:0000711
A multilayer of deep cells of fairly uniform thickness that forms during early epiboly (at dome stage; upon conversion of the blastodisc to the blastoderm); during gastrulation the DEL (deep cell layer) gives rise to the epiblast and hypoblast.[accessedResource: ZFA:0000711][accessDate: 04-11-2010]
DEL cells
deep cell layer
Natural Language Generator 8th April 2010
James Malone
A101D
An a101d is a cell line.
An a101d is all of the following: something that is bearer of a melanoma, something that derives from a homo sapiens, and something that derives from a skin.
Ele Holloway
MDCC-MSB1
Inflammation of a muscle or muscle tissue.
MSH:D009220
INFLAMM MYOPATHY
MYOPATHIES IDIOPATHIC INFLAMM
DOID:633
INFECT MYOSITIS
Unspecified disorder of muscle, ligament, and fascia[accessedResource: ICD9:728.9][accessDate: 04-11-2010]
Myositis (disorder)
Muscle Disease, Inflammatory
James Malone
Infectious Myositides[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Muscle Disease, Inflammatory[accessedResource: MSH:D009220][accessDate: 04-11-2010]
ICD9:729.1
Inflammatory disorder of muscle (disorder)[accessedResource: SNOMEDCT:128496001][accessDate: 04-11-2010]
Inflammation of a muscle or muscle tissue.[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Myositis, NOS
MYALGIA AND MYOSITIS NOS
GeneRIF:15338498
Inflammatory disorder of muscle
SNOMEDCT:128496001
Mylagia and myositis, unspecified[accessedResource: ICD9:729.1][accessDate: 04-11-2010]
An inflammatory process affecting the skeletal muscles. Causes include infections, injuries, and autoimmune disorders.[accessedResource: NCIt:C27578][accessDate: 04-11-2010]
Proliferative Myositides[accessedResource: MSH:D009220][accessDate: 04-11-2010]
GeneRIF:12618121
Focal Myositides
MUSCLE/LIGAMENT DIS NOS[accessedResource: ICD9:728.9][accessDate: 04-11-2010]
INFLAMM MUSCLE DIS[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Inflammatory disorder of muscle (disorder)
Inflammatory Muscle Diseases
Proliferative Myositides
Myopathy, Idiopathic Inflammatory
Muscle inflammation
An inflammatory process affecting the skeletal muscles. Causes include infections, injuries, and autoimmune disorders.
INFLAMM MYOPATHY[accessedResource: MSH:D009220][accessDate: 04-11-2010]
GeneRIF:12937135
Mylagia and myositis, unspecified
INFECT MYOSITIS[accessedResource: MSH:D009220][accessDate: 04-11-2010]
GeneRIF:14569203
GeneRIF:12667656
Myositis unspecified[accessedResource: SNOMEDCT:203110007][accessDate: 04-11-2010]
GeneRIF:16115818
Myositis unspecified (disorder)
GeneRIF:11829483
INFLAMM MUSCLE DIS
Myositides, Infectious
Idiopathic Inflammatory Myopathies
MYALGIA AND MYOSITIS NOS[accessedResource: ICD9:729.1][accessDate: 04-11-2010]
Myositis unspecified (disorder)[accessedResource: DOID:633][accessDate: 04-11-2010]
Myositis unspecified
NCIt:C27578
GeneRIF:14741210
Inflammatory Muscle Diseases[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Inflammatory Myopathy, Idiopathic[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Focal Myositis
Proliferative Myositis
Inflammatory Myopathies
Muscle inflammation[accessedResource: SNOMEDCT:26889001][accessDate: 04-11-2010]
Myositis NOS[accessedResource: DOID:633][accessDate: 04-11-2010]
Myositis, Proliferative[accessedResource: MSH:D009220][accessDate: 04-11-2010]
INFLAMM MYOPATHIES IDIOPATHIC[accessedResource: MSH:D009220][accessDate: 04-11-2010]
MUSCLE/LIGAMENT DIS NOS
Myositis, Focal[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Myositides
Inflammatory Myopathies[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Inflammatory disorder of muscle[accessedResource: SNOMEDCT:128496001][accessDate: 04-11-2010]
Myositis, Infectious[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Idiopathic Inflammatory Myopathies[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Myopathy, Inflammatory
myositis
Myositides, Focal[accessedResource: MSH:D009220][accessDate: 04-11-2010]
SNOMEDCT:26889001
SNOMEDCT:203110007
Myositis (disorder)[accessedResource: DOID:633][accessDate: 04-11-2010]
Myositides[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Unspecified disorder of muscle, ligament, and fascia
GeneRIF:15950936
ICD9:728.9
GeneRIF:12742663
Infectious Myositis
Inflammatory Myopathy[accessedResource: MSH:D009220][accessDate: 04-11-2010]
GM12145
James Malone
cm
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cm
James Malone
http://www.ebi.ac.uk/efo/EFO_0001720
true
Jie Zheng
A length unit which is equal to one hundredth of a meter or 10^[-2] m.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cm[accessedResource: MO_837][accessDate: 04-11-2010]
Tomasz Adamusiak
centimeter
A centimeter is a length unit which is equal to one hundredth of a meter or 10^-2 m.
centimetre
MO_837
MAT:0000312
James Malone
FMAID:14546
transverse colon
colon transversum
colon transversum[accessedResource: BTO:0000272][accessDate: 04-11-2010]
The portion of the colon that runs transversely across the upper part of the abdomen, from the right to the left colic flexure.[accessedResource: BTO:0000272][accessDate: 04-11-2010]
BTO:0000272
The portion of the colon that runs transversely across the upper part of the abdomen, from the right to the left colic flexure.
http://www.ebi.ac.uk/efo/EFO_0002489
5-Fluorouracil 1beta-D-ribofuranoside
The 5-fluoro derivative of uridine.
InChI=1/C9H11FN2O6/c10-3-1-12(9(17)11-7(3)16)8-6(15)5(14)4(2-13)18-8/h1,4-6,8,13-15H,2H2,(H,11,16,17)/t4-,5-,6-,8-/m1/s1/f/h11H
OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n1cc(F)c(=O)[nH]c1=O
InChIKey=FHIDNBAQOFJWCA-OPTMDVTPDF
5-fluorouridine
James Malone
Tomasz Adamusiak
C9H11FN2O6
Ele Holloway
NIFSTD:birnlex_2087
MO_192
The observable form taken by some character (or group of characters) in an individual or an organism, excluding pathology and disease. The detectable outward manifestations of a specific genotype.
phenotype
Tomasz Adamusiak
Jie Zheng
James Malone
James Malone
An invasive ductal breast carcinoma associated with a lobular carcinomatous component. The lobular carcinomatous component may be in situ or invasive.[accessedResource: NCIt:C7688][accessDate: 04-11-2010]
Invasive Duct and Lobular Carcinoma[accessedResource: NCIt:C7688][accessDate: 04-11-2010]
Invasive Duct and Lobular Carcinoma
NCIt:C7688
invasive ductal and lobular carcinoma
DOID:6583
Infiltrating ductal and Lobular carcinoma
Infiltrating Ductal and Lobular Carcinoma[accessedResource: NCIt:C7688][accessDate: 04-11-2010]
An invasive ductal breast carcinoma associated with a lobular carcinomatous component. The lobular carcinomatous component may be in situ or invasive.
http://www.ebi.ac.uk/efo/EFO_0001842
CHEBI:35493
A drug that prevents or reduces fever by lowering the body temperature from a raised state. An antipyretic will not affect the normal body temperature if one does not have fever. Antipyretics cause the hypothalamus to override an interleukin-induced increase in temperature. The body will then work to lower the temperature and the result is a reduction in fever.
antipyretic
James Malone
SW954
James Malone
Ele Holloway
g/L
James Malone
http://www.ebi.ac.uk/efo/EFO_0001810
A mass unit density which is equal to mass of an object in grams divided by the volume in liters.
true
A gram per liter is a density unit which is equal to mass of an object in grams divided by the volume in liters.
gram per liter
UO:0000175
GM06994
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158825&type=germplasm
CS57801 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158825&type=germplasm
CS57801
James Malone
NCCNCCNCCNCCN
3,6,9-triazaundecamethylenediamine
InChIKey=FAGUFWYHJQFNRV-UHFFFAOYAH
A polyazaalkane that has formula C8H23N5.
CHEBI:49798
tetraethylenepentamine
tetren
N-(2-aminoethyl)-N'-[2-[(2-aminoethyl)amino]ethyl]-1,2-ethanediamine
TEPA
http://www.ebi.ac.uk/efo/EFO_0001623
C8H23N5
3,6,9-triazaundecane-1,11-diamine
1,11-Diamino-3,6,9-triazaundecane
1,4,7,10,13-pentaazatridecane
InChI=1/C8H23N5/c9-1-3-11-5-7-13-8-6-12-4-2-10/h11-13H,1-10H2
N-(2-aminoethyl)-N'-{2-[(2-aminoethyl)amino]ethyl}ethane-1,2-diamine
Tetraethylenpentamin
NEOPL NERVE SHEATH
NEOPL NERVE SHEATH[accessedResource: MSH:D018317][accessDate: 04-11-2010]
GeneRIF:12782393
Malignant Peripheral Nerve Sheath Neoplasm[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
Neoplasms which arise from nerve sheaths formed by SCHWANN CELLS in the PERIPHERAL NERVOUS SYSTEM or by OLIGODENDROCYTES in the CENTRAL NERVOUS SYSTEM. Malignant peripheral nerve sheath tumors, NEUROFIBROMA, and NEURILEMMOMA are relatively common tumors in this category.
DOID:5940
GeneRIF:12660952
Malignant Neoplasm of Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
Neurofibrosarcoma[accessedResource: SNOMEDCT:404037002][accessDate: 04-11-2010]
Malignant Tumor of Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
Neurosarcoma [obs]
MPNSTs
Tumors of the Nerve Sheath
Malignant Neurilemoma[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
Malignant Schwannoma
MPNST with mesenchymal differentiation[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
Perineurioma[accessedResource: MSH:D018317][accessDate: 04-11-2010]
NCIt:C3798
An uncommon, highly aggressive malignant tumor, arising from the peripheral nerves and affecting mostly adults in their third to sixth decades of life. It usually occurs in medium-sized and large nerves of the buttock, thigh, upper arm, or the paraspinal region. It may be associated with neurofibromatosis 1 (NF1).
MPNST[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
GeneRIF:12152785
Neurogenic sarcoma [obs]
Malignant schwannoma[accessedResource: SNOMEDCT:404037002][accessDate: 04-11-2010]
Malignant Tumor of the Peripheral Nerve Sheath
Neurogenic sarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
Neurofibrosarcoma [obs]
James Malone
Malignant Neoplasm of Peripheral Nerve Sheath
Neurofibrosarcoma
Nerve Sheath Tumors, Peripheral[accessedResource: MSH:D018317][accessDate: 04-11-2010]
Malignant Tumor of the Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
MPNST - Malignant peripheral nerve sheath tumor[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
Melanotic MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
malignant neoplasm of the peripheral nerve Sheath
Neoplasms, Nerve Sheath[accessedResource: MSH:D018317][accessDate: 04-11-2010]
Neurosarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
MPNST with glandular differentiation[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
Neoplasms, Nerve Sheath
MPNST - Malignant peripheral nerve sheath tumour[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
Nerve Sheath Neoplasm
MPNST - Malignant peripheral nerve sheath tumor
Neurogenic sarcoma[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
GeneRIF:14991838
MPNST with mesenchymal differentiation
Neoplasms which arise from nerve sheaths formed by SCHWANN CELLS in the PERIPHERAL NERVOUS SYSTEM or by OLIGODENDROCYTES in the CENTRAL NERVOUS SYSTEM. Malignant peripheral nerve sheath tumors, NEUROFIBROMA, and NEURILEMMOMA are relatively common tumors in this category.[accessedResource: MSH:D018317][accessDate: 04-11-2010]
GeneRIF:11642720
Malignant Tumor of Peripheral Nerve Sheath
Malignant Neurilemmoma[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
Nerve Sheath Tumors[accessedResource: MSH:D018317][accessDate: 04-11-2010]
Malignant Peripheral Nerve Sheath Neoplasm
Peripheral Nerve Sheath Tumors
Perineuriomas[accessedResource: MSH:D018317][accessDate: 04-11-2010]
Neurosarcoma
MPNSTs[accessedResource: MSH:D018317][accessDate: 04-11-2010]
Malignant Peripheral Nerve Sheath Tumors[accessedResource: MSH:D018317][accessDate: 04-11-2010]
MPNST - Malignant peripheral nerve sheath tumour
Melanotic MPNST
An uncommon, highly aggressive malignant tumor, arising from the peripheral nerves and affecting mostly adults in their third to sixth decades of life. It usually occurs in medium-sized and large nerves of the buttock, thigh, upper arm, or the paraspinal region. It may be associated with neurofibromatosis 1 (NF1).[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
SNOMEDCT:19897006
GeneRIF:14519636
MPNST
Neurosarcoma[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
Perineuriomas
Malignant Neurilemmoma
Malignant Neoplasm of the Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
Peripheral Nerve Sheath Tumors, Malignant
Epithelioid MPNST
GeneRIF:12917360
malignant peripheral nerve sheath tumor (disorder)[accessedResource: DOID:5940][accessDate: 04-11-2010]
Malignant peripheral nerve sheath tumour[accessedResource: SNOMEDCT:404037002][accessDate: 04-11-2010]
Neurogenic sarcoma
Neurofibrosarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
MPNST with glandular differentiation
SNOMEDCT:404037002
malignant peripheral nerve sheath tumor [dup] (morphologic abnormality)[accessedResource: DOID:5940][accessDate: 04-11-2010]
Malignant peripheral nerve sheath tumor [dup] (morphologic abnormality)
malignant peripheral nerve sheath tumor
malignant peripheral nerve sheath tumor (morphologic abnormality)[accessedResource: DOID:5940][accessDate: 04-11-2010]
malignant peripheral nerve sheath tumor (disorder)
Neoplasm, Nerve Sheath[accessedResource: MSH:D018317][accessDate: 04-11-2010]
Melanotic psammomatous MPNST
Malignant Neurilemoma
Melanotic psammomatous MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
Perineurioma
Malignant Peripheral Nerve Sheath Tumour
Tumors of the Nerve Sheath[accessedResource: MSH:D018317][accessDate: 04-11-2010]
MSH:D018317
Epithelioid MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
GeneRIF:12730955
Nerve Sheath Tumors
Malignant peripheral nerve sheath tumor (morphologic abnormality)
James Malone
EcR-RKO/KLF4
Ele Holloway
A component of the embryonic/larval ring gland composed of a cluster of about 10 cells that sit medially on top of the aorta.
embryonic corpus allatum
embryonic/larval corpus allatum
embryonic/larval corpus allatum[accessedResource: FBbt:00001719][accessDate: 04-11-2010]
James Malone
FBbt:00001719
A component of the embryonic/larval ring gland composed of a cluster of about 10 cells that sit medially on top of the aorta.[accessedResource: FBbt:00001719][accessDate: 04-11-2010]
mTEC
Tomasz Adamusiak
CL:0002365
NCIt:C45702
James Malone
An epithelial cell of the medullary thymus. This cell type expresses a diverse range of tissue-specific antigens. This promiscuous gene expression is a cell-autonomous property of medullary epithelial cells and is maintained during the entire period of thymic T cell output.[accessedResource: CL:0002365][accessDate: 04-11-2010]
mTEC[accessedResource: CL:0002365][accessDate: 04-11-2010]
An epithelial cell located in the inner portion of the thymus where the T lymphocytes become mature and are released into the circulation.[accessedResource: NCIt:C45702][accessDate: 04-11-2010]
An epithelial cell of the medullary thymus. This cell type expresses a diverse range of tissue-specific antigens. This promiscuous gene expression is a cell-autonomous property of medullary epithelial cells and is maintained during the entire period of thymic T cell output.
medullary thymic epithelial cell
An epithelial cell located in the inner portion of the thymus where the T lymphocytes become mature and are released into the circulation.
Hypertrophy is the increase in the volume of an organ or tissue due to the enlargement of its component cells.
hypertrophy
James Malone
alveolus
Bronchial Alveolus[accessedResource: C12986][accessDate: 04-11-2010]
Ele Holloway
Alveoli[accessedResource: C12986][accessDate: 04-11-2010]
Bronchial Alveolus
James Malone
C12986
Alveoli
1.8
true
obsolete_HepG2
James Malone
Ele Holloway
Duplicate with EFO_0001187
Dopamin
Dophamine[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
Tomasz Adamusiak
Dopamine HCl[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
Hydroxytyramin
Deoxyepinephrine[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
Oxytyramine
InChIKey=VYFYYTLLBUKUHU-UHFFFAOYAA
C8H11NO2
Revimine
Catechol in which the hydrogen at position 4 is substituted by a 2-aminoethyl group.
dopamina
Revimine[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
Hydroxytyramine
James Malone
2-(3,4-dihydroxyphenyl)ethylamine
Intropin
dopaminum
4-(2-aminoethyl)-1,2-benzenediol
Hydroxytyramine[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
NIFSTD:sao2050279787
One of the catecholamine neurotransmitters in the brain. It is derived from tyrosine and is the precursor to norepinephrine and epinephrine. Dopamine is a major transmitter in the extrapyramidal system of the brain, and important in regulating movement. A family of receptors (receptors, dopamine) mediate its action. (PubChem) Pharmacology: Dopamine is a natural catecholamine formed by the decarboxylation of 3,4-dihydroxyphenylalanine (DOPA). It is a precursor to norepinephrine in noradrenergic nerves and is also a neurotransmitter in certain areas of the central nervous system, especially in the nigrostriatal tract, and in a few peripheral sympathetic nerves. Dopamine produces positive chronotropic and inotropic effects on the myocardium, resulting in increased heart rate and cardiac contractility. This is accomplished directly by exerting an agonist action on beta-adrenoceptors and indirectly by causing release of norepinephrine from storage sites in sympathetic nerve endings. Mechanism of action: Dopamine is a precursor to norepinephrine in noradrenergic nerves and is also a neurotransmitter in certain areas of the central nervous system. Dopamine produces positive chronotropic and inotropic effects on the myocardium, resulting in increased heart rate and cardiac contractility. This is accomplished directly by exerting an agonist action on beta-adrenoceptors and indirectly by causing release of norepinephrine from storage sites in sympathetic nerve endings. Drug type: Approved. Small Molecule. Drug category: Cardiotonic Agents. Dopamine Agents. Sympathomimetic. Sympathomimetics[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
InChI=1/C8H11NO2/c9-4-3-6-1-2-7(10)8(11)5-6/h1-2,5,10-11H,3-4,9H2
3,4-Dihydroxyphenethylamine
http://www.ebi.ac.uk/efo/EFO_0001526
Dophamine
Intropin[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
Dopamin[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
One of the catecholamine neurotransmitters in the brain. It is derived from tyrosine and is the precursor to norepinephrine and epinephrine. Dopamine is a major transmitter in the extrapyramidal system of the brain, and important in regulating movement. A family of receptors (receptors, dopamine) mediate its action. (PubChem) Pharmacology: Dopamine is a natural catecholamine formed by the decarboxylation of 3,4-dihydroxyphenylalanine (DOPA). It is a precursor to norepinephrine in noradrenergic nerves and is also a neurotransmitter in certain areas of the central nervous system, especially in the nigrostriatal tract, and in a few peripheral sympathetic nerves. Dopamine produces positive chronotropic and inotropic effects on the myocardium, resulting in increased heart rate and cardiac contractility. This is accomplished directly by exerting an agonist action on beta-adrenoceptors and indirectly by causing release of norepinephrine from storage sites in sympathetic nerve endings. Mechanism of action: Dopamine is a precursor to norepinephrine in noradrenergic nerves and is also a neurotransmitter in certain areas of the central nervous system. Dopamine produces positive chronotropic and inotropic effects on the myocardium, resulting in increased heart rate and cardiac contractility. This is accomplished directly by exerting an agonist action on beta-adrenoceptors and indirectly by causing release of norepinephrine from storage sites in sympathetic nerve endings. Drug type: Approved. Small Molecule. Drug category: Cardiotonic Agents. Dopamine Agents. Sympathomimetic. Sympathomimetics
One of the catecholamine neurotransmitters in the brain. It is derived from tyrosine and is the precursor to norepinephrine and epinephrin. Dopamine is a major transmitter in the extrapyramidal system of the brain, and important in regulating movement. A family of receptors (receptors, dopamine) mediate its action (MSH).
3-Hydroxytyramine
Oxytyramine[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
4-(2-aminoethyl)catechol
NCCc1ccc(O)c(O)c1
Deoxyepinephrine
dopamine
Hydroxytyramin[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
A catecholamine that has formula C8H11NO2.
Dopamine HCl
4-(2-aminoethyl)pyrocatechol
An assay with input DNA
DNA assay
James Malone
MA:0000385
EV:0100112
EMAPA:18984
Uterine tube[accessedResource: FMAID:18245][accessDate: 04-11-2010]
tuba uterina[accessedResource: BTO:0000980][accessDate: 04-11-2010]
oviducts[accessedResource: ZFA:0000560][accessDate: 04-11-2010]
salpinx[accessedResource: BTO:0000980][accessDate: 04-11-2010]
TADS:0000415
Organ with organ cavity which connects the uterine cavity to the peritoneal cavity. Examples: There are only two uterine tubes, the right and the left uterine tubes.
salpinx
uterine tube
oviducts
tuba uterinae
A long slender tube that extends from the upper lateral cornu of the uterus to the region of the ovary of the same side; it is attached to the broad ligament by the mesosalpinx, and consists of an ampulla, an infundibulum, an isthmus, two ostia, and a pars uterina.
tuba uterina
A long slender tube that extends from the upper lateral cornu of the uterus to the region of the ovary of the same side; it is attached to the broad ligament by the mesosalpinx, and consists of an ampulla, an infundibulum, an isthmus, two ostia, and a pars uterina.[accessedResource: BTO:0000980][accessDate: 04-11-2010]
TAO:0000560
ZFA:0000560
FMAID:18245
FBbt:00004911
oviduct
fallopian tube[accessedResource: MAT:0000126][accessDate: 04-11-2010]
tuba uterinae[accessedResource: BTO:0000980][accessDate: 04-11-2010]
BTO:0000980
James Malone
MAT:0000126
Fallopian tube
MO_38
A measurement of the effects of different investigators, laboratories, or organizations on experimental results are studied.
operator variation
James Malone
anticonvulsive agent
antiepileptiques
Antikonvulsivum
Antiepileptika
antiepileptique
A drug used to prevent seizures or reduce their severity.
http://www.ebi.ac.uk/efo/EFO_0001849
Antiepileptikum
CHEBI:35623
Antikonvulsiva
anticonvulsants
anticonvulsant
James Malone
antiepileptic
SiHa
James Malone
Ele Holloway
unspecified peripheral T-cell lymphoma
James Malone
MAT:0000002
fungal component
James Malone
FMA:22543
plantaris
Plantaris[accessedResource: FMA:22543][accessDate: 04-11-2010]
plantaris muscle
H820
NCI-H820
James Malone
CHEBI:22986
calcium ionophores
http://www.ebi.ac.uk/efo/EFO_0002402
calcium ionophore
James Malone
Ele Holloway
Germplasm:4640315
SALK_037727 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=germplasm&id=4640315
SALK_037727
James Malone
[1-(4-chlorobenzoyl)-5-methoxy-2-methyl-1H-indol-3-yl]acetic acid
InChIKey=CGIGDMFJXJATDK-QWOVJGMICU
An indole-3-acetic acid that has formula C19H16ClNO4.
InChI=1/C19H16ClNO4/c1-11-15(10-18(22)23)16-9-14(25-2)7-8-17(16)21(11)19(24)12-3-5-13(20)6-4-12/h3-9H,10H2,1-2H3,(H,22,23)/f/h22H
Indocin
http://www.ebi.ac.uk/efo/EFO_0001557
CHEBI:49662
COc1ccc2n(C(=O)c3ccc(Cl)cc3)c(C)c(CC(O)=O)c2c1
James Malone
1-(p-chlorobenzoyl)-5-methoxy-2-methylindole-3-acetic acid
C19H16ClNO4
Indometacin
indomethacin
material property
SpecificallyDependentContinuant
James Malone
true
An experimental factor which is a property or characteristic of some other entity. For example, the mouse has the colour white.
sample characteristic
A continuant [snap:Continuant] that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same.
http://www.ebi.ac.uk/efo/EFO_0001443
The modified upper part of the trachea of air-breathing vertebrates that in humans, most other mammals, and a few lower forms contains the vocal cords.[accessedResource: BTO:0001208][accessDate: 04-11-2010]
James Malone
EMAPA:18333
FMAID:55097
SAEL:59
Heterogeneous cluster that connects the pharynx to the tracheobronchial tree. Examples: There is only one larynx.
larynx
BTO:0001208
The modified upper part of the trachea of air-breathing vertebrates that in humans, most other mammals, and a few lower forms contains the vocal cords.
MA:0000414
MAT:0000187
EV:0100039
AAO:0000268
NIFSTD:birnlex_1202
FMA:62394
Peduncle of midbrain
Peduncle of midbrain[accessedResource: FMA:62394][accessDate: 04-11-2010]
cerebral peduncle
Tomasz Adamusiak
James Malone
TMK1
James Malone
Ele Holloway
S=C1SSC=C1
1,2-dithiol-3-thione
A 1,2-dithiole that has formula C3H2S3.
Ele Holloway
Tomasz Adamusiak
3H-1,2-dithiole-3-thione
http://www.ebi.ac.uk/efo/EFO_0002724
CHEBI:50866
C3H2S3
1,2-dithiole-3-thione
InChIKey=LZENMJMJWQSSNJ-UHFFFAOYAS
InChI=1/C3H2S3/c4-3-1-2-5-6-3/h1-2H
Adult Type Dermatomyositis[accessedResource: MSH:D003882][accessDate: 04-11-2010]
NCIt:C27576
GeneRIF:15338511
childhood Dermatomyositis
A subacute or chronic inflammatory disease of muscle and skin, marked by proximal muscle weakness and a characteristic skin rash. The illness occurs with approximately equal frequency in children and adults. The skin lesions usually take the form of a purplish rash (or less often an exfoliative dermatitis) involving the nose, cheeks, forehead, upper trunk, and arms. The disease is associated with a complement mediated intramuscular microangiopathy, leading to loss of capillaries, muscle ischemia, muscle-fiber necrosis, and perifascicular atrophy. The childhood form of this disease tends to evolve into a systemic vasculitis. Dermatomyositis may occur in association with malignant neoplasms. (From Adams et al., Principles of Neurology, 6th ed, pp1405-6)[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Dermatopolymyositides
childhood Dermatomyositis[accessedResource: DOID:14203][accessDate: 04-11-2010]
Polymyositis-Dermatomyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
MSH:D003882
Dermatomyositides, Adult Type
Dermatomyositides
A subacute or chronic inflammatory disease of muscle and skin, marked by proximal muscle weakness and a characteristic skin rash. The illness occurs with approximately equal frequency in children and adults. The skin lesions usually take the form of a purplish rash (or less often an exfoliative dermatitis) involving the nose, cheeks, forehead, upper trunk, and arms. The disease is associated with a complement mediated intramuscular microangiopathy, leading to loss of capillaries, muscle ischemia, muscle-fiber necrosis, and perifascicular atrophy. The childhood form of this disease tends to evolve into a systemic vasculitis. Dermatomyositis may occur in association with malignant neoplasms. (From Adams et al., Principles of Neurology, 6th ed, pp1405-6)
DOID:14203
Dermatomyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Dermatomyositis, Childhood Type[accessedResource: MSH:D003882][accessDate: 04-11-2010]
childhood type dermatomyositis (disorder)
Dermatomyositis
Dermatomyositides, Childhood Type
SNOMEDCT:1212005
James Malone
Polymyositis Dermatomyositis
Dermatomyositis[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Polymyositis Dermatomyositis[accessedResource: MSH:D003882][accessDate: 04-11-2010]
juvenile dermatomyositis
Dermatopolymyositis
Childhood Type Dermatomyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Childhood type dermatomyositis (disorder)[accessedResource: SNOMEDCT:1212005][accessDate: 04-11-2010]
Dermatopolymyositis[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Dermatopolymyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Adult Type Dermatomyositis
Polymyositis-Dermatomyositides
Childhood Type Dermatomyositis
Adult Type Dermatomyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Aicardi's syndrome (disorder)
NCIt:C35256
DOID:8461
Aicardi's syndrome
AIC - Aicardi syndrome
James Malone
Aicardi's syndrome (disorder)[accessedResource: SNOMEDCT:80651009][accessDate: 04-11-2010]
SNOMEDCT:80651009
AIC - Aicardi syndrome[accessedResource: SNOMEDCT:80651009][accessDate: 04-11-2010]
Aicardi syndrome
Aicardi's syndrome[accessedResource: DOID:8461][accessDate: 04-11-2010]
steroids
a steroid
Any of naturally occurring compounds and synthetic analogues, based on the cyclopenta[a]phenanthrene carbon skeleton, partially or completely hydrogenated; there are usually methyl groups at C-10 and C-13, and often an alkyl group at C-17. By extension, one or more bond scissions, ring expansions and/or ring contractions of the skeleton may have occurred. Natural steroids are derived biogenetically from triterpenoids.
steroid
http://www.arabidopsis.org/servlets/TairObject?id=1005158801&type=germplasm
CS57777 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158801&type=germplasm
CS57777
James Malone
rhabdomyosarcoma
4475
James Malone
Ele Holloway
SKMEL1
James Malone
Ele Holloway
NCI-H650
James Malone
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0001871
Inhalationsnarkotikum
CHEBI:38870
Inhalationsanaesthetikum
Inhalationsnarkotika
Inhalationsanaesthetika
James Malone
inhalation anaesthetic
anesthetic gases
inhalation anesthetics
MO_778
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#consortium_member
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#consortium_member[accessedResource: MO_778][accessDate: 04-11-2010]
consortium member
Tomasz Adamusiak
WBls:0000035
The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch.
L3 larva
FMA:61906
Intermediate temporal gyrus
Intermediate temporal gyrus[accessedResource: FMA:61906][accessDate: 04-11-2010]
middle temporal gyrus
James Malone
Ele Holloway
STA ET1
STA-ET-1
James Malone
Ele Holloway
http://www.arabidopsis.org/servlets/TairObject?id=1005158759&type=germplasm
CS57735 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158759&type=germplasm
CS57735
James Malone
CSBwt-rescued fibroblasts
James Malone
RDES
James Malone
Ele Holloway
SKMEL3
James Malone
Ele Holloway
SW1116
James Malone
Ele Holloway
Merged plan specification and protocol and made synonymous hence this class is redundant.
true
obsolete_protocol
fission yeast
S. pombe
http://www.ebi.ac.uk/efo/EFO_0002656
Schizosaccharomyces pombe
James Malone
true
g/kg
gram per kilogram
James Malone
MAT:0000358
BTO:0001400
A short fleshy usually underground stem bearing minute scale leaves each of which bears a bud in its axil and is potentially able to produce a new plant.[accessedResource: BTO:0001400][accessDate: 04-11-2010]
PO:0004543
tuber
A short fleshy usually underground stem bearing minute scale leaves each of which bears a bud in its axil and is potentially able to produce a new plant.
James Malone
MO_981
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#quality_control_testing_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#quality_control_testing_design[accessedResource: MO_981][accessDate: 04-11-2010]
quality control testing design
Tomasz Adamusiak
MO_695
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#data_coder
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#data_coder[accessedResource: MO_695][accessDate: 04-11-2010]
data coder
Tomasz Adamusiak
James Malone
thigh bone
femur
os femorale
NCIt:C12717
femoral bone[accessedResource: BTO:0001284][accessDate: 04-11-2010]
The bone that extends from the pelvis to the knee, being the longest and largest bone in the body; its head articulates with the acetabulum of the hip bone, and distally, the femur, along with the patella and tibia, forms the knee joint.[accessedResource: BTO:0001284][accessDate: 04-11-2010]
The upper leg bone positioned between the pelvis and the knee.[accessedResource: NCIt:C12717][accessDate: 04-11-2010]
Femoral
The upper leg bone positioned between the pelvis and the knee.
Femoral[accessedResource: NCIt:C12717][accessDate: 04-11-2010]
The bone that extends from the pelvis to the knee, being the longest and largest bone in the body; its head articulates with the acetabulum of the hip bone, and distally, the femur, along with the patella and tibia, forms the knee joint.
os femoris
BTO:0001284
os femoris[accessedResource: BTO:0001284][accessDate: 04-11-2010]
femoral bone
thigh bone[accessedResource: BTO:0001284][accessDate: 04-11-2010]
os femorale[accessedResource: BTO:0001284][accessDate: 04-11-2010]
Any of the immature blood cells that develop in the bone marrow, such as those involved in hematopoiesis.[accessedResource: BTO:0001441][accessDate: 04-11-2010]
A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage.[accessedResource: CL:0000763][accessDate: 04-11-2010]
myeloid cell
A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage.
CL:0000763
Any of the immature blood cells that develop in the bone marrow, such as those involved in hematopoiesis.
James Malone
BTO:0001441
marrow cell
marrow cell[accessedResource: BTO:0001441][accessDate: 04-11-2010]
A group of people with a common cultural heritage that sets them apart from others in a variety of social relationships. (MSH); A social group characterized by a distinctive social and cultural tradition maintained from generation to generation, a common history and origin and a sense of identification with the group; members of the group have distinctive features in their way of life, shared experiences and often a common genetic heritage; these features may be reflected in their experience of health and disease. (NCI); Ethnicity - an arbitrary classification of the social group a person belongs to, and either identifies with or is identified with by others, as a result of a complex of cultural, biological, geographical and other factors such as linguistic, dietary and religion traditions; ancestry, background, allegiance, or association; and physical characteristics traditionally associated with race. Increasingly the concept is used synonymously with race but this use trend has a pragmatic basis rather than scientific. (NCI); The concept of ethnic origin is an attempt to classify people, not according to their current ethnicity, but according to where their ancestors came from. Ethnic origin has become a popular classification in statistics, where the concept of race has been largely discarded. (from Wikipedia) (NCI); a group of people with a common cultural heritage that sets them apart from others in a variety of social relationships. (CSP)[accessedResource: NIFSTD:birnlex_3016][accessDate: 04-11-2010]
http://en.wikipedia.org/wiki/Ethnic_group
James Malone
Ethnicity
An ethnic group is a population whose members have a common heritage that is real or presumed such as common culture, language, religion, behaviour or biological trait.
A group of people with a common cultural heritage that sets them apart from others in a variety of social relationships. (MSH); A social group characterized by a distinctive social and cultural tradition maintained from generation to generation, a common history and origin and a sense of identification with the group; members of the group have distinctive features in their way of life, shared experiences and often a common genetic heritage; these features may be reflected in their experience of health and disease. (NCI); Ethnicity - an arbitrary classification of the social group a person belongs to, and either identifies with or is identified with by others, as a result of a complex of cultural, biological, geographical and other factors such as linguistic, dietary and religion traditions; ancestry, background, allegiance, or association; and physical characteristics traditionally associated with race. Increasingly the concept is used synonymously with race but this use trend has a pragmatic basis rather than scientific. (NCI); The concept of ethnic origin is an attempt to classify people, not according to their current ethnicity, but according to where their ancestors came from. Ethnic origin has become a popular classification in statistics, where the concept of race has been largely discarded. (from Wikipedia) (NCI); a group of people with a common cultural heritage that sets them apart from others in a variety of social relationships. (CSP)
Tomasz Adamusiak
NIFSTD:birnlex_3016
Ethnicity[accessedResource: NIFSTD:birnlex_3016][accessDate: 04-11-2010]
ethnic group
race
http://www.arabidopsis.org/servlets/TairObject?id=1005158914&type=germplasm
CS57890 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158914&type=germplasm
CS57890
James Malone
http://jaxmice.jax.org/strain/009284.html
ILSXISS94/TejJ
Tomasz Adamusiak
http://www.arabidopsis.org/servlets/TairObject?id=1005158776&type=germplasm
CS57752 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158776&type=germplasm
CS57752
James Malone
C10H15N
InChIKey=MYWUZJCMWCOHBA-VIFPVBQEBN
d-N-methylamphetamine
(alphaS)-N,alpha-dimethylbenzeneethanamine
methyl-beta-phenylisopropylamine
(2S)-N-methyl-1-phenylpropan-2-amine
http://www.ebi.ac.uk/efo/EFO_0001571
methamphetamine
CHEBI:6809
d-phenylisopropylmethylamine
CN[C@@H](C)Cc1ccccc1
(+)-(S)-N-alpha-dimethylphenethylamine
d-desoxyephedrine
An amphetamine that has formula C10H15N.
InChI=1/C10H15N/c1-9(11-2)8-10-6-4-3-5-7-10/h3-7,9,11H,8H2,1-2H3/t9-/m0/s1
d-deoxyephedrine
(S)-N,alpha-dimethylbenzeneethanamine
d-1-phenyl-2-methylaminopropane
antiemetics
antiemetico
http://www.ebi.ac.uk/efo/EFO_0001857
CHEBI:50919
A drug used to prevent nausea or vomiting. An antiemetic may act by a wide range of mechanisms: it might affect the medullary control centers (the vomiting center and the chemoreceptive trigger zone) or affect the peripheral receptors.
antiemetic
James Malone
GM12155
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158813&type=germplasm
CS57789 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158813&type=germplasm
CS57789
James Malone
dorEpiP2
dorsal epidermis primordium
dorsal epidermis specific anlage[accessedResource: FBbt:00005526][accessDate: 04-11-2010]
dorEpiP2[accessedResource: FBbt:00005526][accessDate: 04-11-2010]
FBbt:00005526
dorsal epidermis specific anlage
James Malone
Obsolete: No longer required in EFO
true
NCIt:C22682
Bone (MMHCC)
obsolete_bone MMHCC
James Malone
fat tissue[accessedResource: BTO:0001487][accessDate: 04-11-2010]
Body Fat
NCIt:C12472
adipose
adipose tissue
adipose[accessedResource: NCIt:C12472][accessDate: 04-11-2010]
BTO:0001487
BODYFAT[accessedResource: NCIt:C12472][accessDate: 04-11-2010]
Connective tissue in which fat is stored and which has the cells distended by droplets of fat.
A specialized form of connective tissue consisting primarily of adipocytes (fat cells), surrounded by a meshwork of collagen fibers.
James Malone
A specialized form of connective tissue consisting primarily of adipocytes (fat cells), surrounded by a meshwork of collagen fibers.[accessedResource: NCIt:C12472][accessDate: 04-11-2010]
Connective tissue in which fat is stored and which has the cells distended by droplets of fat.[accessedResource: BTO:0001487][accessDate: 04-11-2010]
fat tissue
BY4741
James Malone
TAO:0001155
NIFSTD:birnlex_1166
FMAID:66070
BTO:0002506
James Malone
PNS - enteric[accessedResource: MAT:0000102][accessDate: 04-11-2010]
MA:0000222
Two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gallbladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation.[accessedResource: BTO:0002506][accessDate: 04-11-2010]
ZFA:0001155
enteric PNS
MAT:0000102
enteric nervous system
Tomasz Adamusiak
Two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gallbladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation.
GM12236
James Malone
DU4475
James Malone
Ele Holloway
dendritic cell-derived intermediate cell
C45H69N5O8S
apratoxin A
N-((2E)-3-((4S)-4,5-dihydro-2-((1S,2S,4S,6S)-2,6-dihydroxy-1,4,7,7-tetramethyloctyl)-4-thiazolyl)-2-methyl-1-oxo-2-propenyl)-O-methyl-L-tyrosyl-N-methyl-L-alanyl-N-methyl-L-isoleucyl-L-proline (4-16)-lactone
7'''.1,4-anhydro(N-{3-[2-(3,7-dihydroxy-5,8,8-trimethylnonan-2-yl)-4,5-dihydro-1,3-thiazol-4-yl]-2-methylpropenoyl}-O-methyl-L-tyrosyl-N-methyl-L-alanyl-N-methyl-L-isoleucyl-L-proline)
(2S,3S,5S,7S,10S,16S,19S,22S,25E,27S)-16-[(2S)-butan-2-yl]-7-tert-butyl-3-hydroxy-22-(4-methoxybenzyl)-2,5,17,19,20,25-hexamethyl-8-oxa-29-thia-14,17,20,23,30-pentaazatricyclo[25.2.1.0(10,14)]triaconta-1(30),25-diene-9,15,18,21,24-pentone
An apratoxin that has formula C45H69N5O8S.
[H]N1[C@@H](Cc2ccc(OC)cc2)C(=O)N(C)[C@@H](C)C(=O)N(C)[C@@H]([C@@H](C)CC)C(=O)N2CCC[C@H]2C(=O)O[C@@H](C[C@@H](C)C[C@H](O)[C@H](C)C2=N[C@H](CS2)\\C=C(C)\\C1=O)C(C)(C)C
InChI=1/C45H69N5O8S/c1-13-27(3)38-43(55)50-20-14-15-35(50)44(56)58-37(45(7,8)9)22-26(2)21-36(51)29(5)40-46-32(25-59-40)23-28(4)39(52)47-34(24-31-16-18-33(57-12)19-17-31)42(54)48(10)30(6)41(53)49(38)11/h16-19,23,26-27,29-30,32,34-38,51H,13-15,20-22,24-25H2,1-12H3,(H,47,52)/b28-23+/t26-,27-,29-,30-,32-,34-,35-,36-,37-,38-/m0/s1/f/h47H
CHEBI:35212
http://www.ebi.ac.uk/efo/EFO_0001488
InChIKey=KXUJXPZXILTXDA-WUCPXUHADD
The terminal bud (0.1 - 1.0 mm) of a plant, which consists of the apical meristem (0.05 - 0.1 mm) and the immediate surrounding leaf primordia and developing leaves and adjacent stem tissue.[accessedResource: BTO:0000247][accessDate: 04-11-2010]
James Malone
GRO:0000370[accessedResource: BTO:0000247][accessDate: 04-11-2010]
shoot tip
shoot apex
PO:0000037
BTO:0000247
shoot tip[accessedResource: BTO:0000247][accessDate: 04-11-2010]
GRO:0000370
The terminal bud (0.1 - 1.0 mm) of a plant, which consists of the apical meristem (0.05 - 0.1 mm) and the immediate surrounding leaf primordia and developing leaves and adjacent stem tissue.
FBbt:00005835
MAT:0000061
James Malone
extraembryonic structures[accessedResource: ZFA:0000020][accessDate: 04-11-2010]
extraembryonic tissue
extraembryonic structure
extraembryonic component
SAEL:39
ZFA:0000020
EMAPA:16042
Anatomical structure that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo.
Anatomical structure that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo.[accessedResource: ZFA:0000020][accessDate: 04-11-2010]
extraembryonic structures
extraembryonic component[accessedResource: MAT:0000061][accessDate: 04-11-2010]
extraembryonic structure[accessedResource: ZFA:0000020][accessDate: 04-11-2010]
Tomasz Adamusiak
APML[accessedResource: NCIt:C3182][accessDate: 04-11-2010]
Acute Promyelocytic Leukemia with t(15;17)(q22;q12); PML/RARA
APL
FAB M3
APML - Acute promyelocytic leukemia
APML
AML with t(15;17)(q22;q12)
Promyelocytic Leukemia
An acute myeloid leukemia (AML) in which abnormal promyelocytes predominate. It is characterized by the t(15;17)(q22;q12) translocation. There are two variants: the typical and microgranular variant. This AML is particularly sensitive to treatment with all trans-retinoic acid and has a favorable prognosis. (WHO, 2001)[accessedResource: NCIt:C3182][accessDate: 04-11-2010]
Acute Promyelocytic Leukemia with t(15;17)(q22;q12); PML/RARA[accessedResource: NCIt:C3182][accessDate: 04-11-2010]
NCIt:C3182
APML - Acute promyelocytic leukemia[accessedResource: NCIt:C3182][accessDate: 04-11-2010]
An acute myeloid leukemia (AML) in which abnormal promyelocytes predominate. It is characterized by the t(15;17)(q22;q12) translocation. There are two variants: the typical and microgranular variant. This AML is particularly sensitive to treatment with all trans-retinoic acid and has a favorable prognosis. (WHO, 2001)
APL[accessedResource: NCIt:C3182][accessDate: 04-11-2010]
Promyelocytic Leukemia[accessedResource: NCIt:C3182][accessDate: 04-11-2010]
FAB M3[accessedResource: NCIt:C3182][accessDate: 04-11-2010]
AML with t(15;17)(q22;q12)[accessedResource: NCIt:C3182][accessDate: 04-11-2010]
acute promyelocytic leukemia
An acute myeloid leukemia (AML) in which abnormal promyelocytes predominate. It is characterized by the t(15;17)(q22;q12) translocation. There are two variants: the typical and micro granular (hypo granular) variant. This AML is particularly sensitive to treatment with all trans-retinoic acid and has a favorable prognosis. (WHO, 2001) -- 2003
MO_101
An animal or plant or part thereof that nourishes and supports a parasite either in a lab or natural environment.
host
Tomasz Adamusiak
Jie Zheng
James Malone
http://jaxmice.jax.org/strain/009275.html
ILSXISS66/TejJ
Tomasz Adamusiak
TERV-ST110
James Malone
NIFSTD:birnlex_982
nucleus raphes posterior
posterior raphe nucleus[accessedResource: BTO:0002434][accessDate: 04-11-2010]
Dorsal raphe[accessedResource: NIFSTD:birnlex_982][accessDate: 04-11-2010]
posterior raphe nucleus
James Malone
nucleus raphes dorsalis
A large raphe nucleus extending from the anterior part of the pons through the mesencephalon; its neurons are serotoninergic.[accessedResource: BTO:0002434][accessDate: 04-11-2010]
BTO:0002434
A large raphe nucleus extending from the anterior part of the pons through the mesencephalon; its neurons are serotoninergic.
nucleus raphes dorsalis[accessedResource: BTO:0002434][accessDate: 04-11-2010]
Tomasz Adamusiak
Dorsal raphe
nucleus raphes posterior[accessedResource: BTO:0002434][accessDate: 04-11-2010]
dorsal raphe nucleus
Not needed.
true
The type of nucleic acid obtained as a result of following a given protocol.
obsolete_nucleic acid extracted
InChIKey=DBUXSCUEGJMZAE-UHFFFAOYAW
monomethylmercury cation
A methylmercury compound that has formula CH3Hg.
C[Hg+]
[HgCH3](+)
CH3Hg
METHYL MERCURY ION
methylmercury(II) cation
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0002730
methylmercury ion(1+)
Methylmercury II
CHEBI:49747
InChI=1/CH3.Hg/h1H3;/q;+1
[HgMe](+)
methylmercury(1+)
Ele Holloway
methylmercury
µs
microsecond
http://www.ebi.ac.uk/efo/EFO_0001792
A microsecond is a time unit which is equal to one millionth of a second or 10^-6 s.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#us
MO_795
Jie Zheng
us
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#us[accessedResource: MO_795][accessDate: 04-11-2010]
Tomasz Adamusiak
A time unit which is equal to one millionth of a second or 10^[-6] s.
true
An epithelial cell derived cell line is defined as something that derives from an epithelial cell.
epithelial cell derived cell line
Natural Language Generator 8th April 2010
James Malone
DB
James Malone
Ele Holloway
FMAID:25202
shoulder
Tomasz Adamusiak
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)
Oligodendroblastoma
Mixed Oligodendroglioma-Astrocytomas
A WHO grade II tumor composed of a conspicuous mixture of two distinct neoplastic cell types morphologically resembling the tumor cells in oligodendroglioma and diffuse astrocytoma. (WHO)
MSH:D009837
Oligodendroglioma, Well-Differentiated[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Mixed Oligodendroglioma-Ependymomas
Oligodendroglioma
Oligodendroblastomas
Oligodendroglioma, Childhood[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Mixed Oligodendroglioma-Astrocytoma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
DOID:7912
Oligodendroglioma, Childhood
Anaplastic Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Mixed Oligo-Astrocytoma
Mixed Oligo-Astrocytoma[accessedResource: NCIt:C4050][accessDate: 10-05-2010]
Oligodendrogliomas, Childhood[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Childhood Oligodendrogliomas
WELL DIFFER OLIGODENDROGLIOMA[accessedResource: MSH:D009837][accessDate: 10-05-2010]
WHO grade II Mixed Glioma
Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroblastomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Mixed Oligodendroglioma Ependymoma
true
Mixed Astrocytic-Oligodendroglial Tumor
Duplicate with oligoastrocytoma (EFO_0000630) use this instead
obsolete_oligoastroglioma
Oligodendrogliomas, Well-Differentiated[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Adult Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
James Malone
mixed Oligodendroglioma-astrocytoma
A WHO grade II tumor composed of a conspicuous mixture of two distinct neoplastic cell types morphologically resembling the tumor cells in oligodendroglioma and diffuse astrocytoma. (WHO)[accessedResource: NCIt:C4050][accessDate: 10-05-2010]
Mixed Astrocytic-Oligodendroglial Tumor[accessedResource: NCIt:C4050][accessDate: 10-05-2010]
Mixed Astrocytic-Oligodendroglial Neoplasm
Oligodendroglioma, Anaplastic[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
WHO grade II mixed glioma[accessedResource: DOID:7912][accessDate: 10-05-2010]
Well-Differentiated Oligodendrogliomas
Mixed Oligodendroglioma Ependymoma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Anaplastic Oligodendroglioma
Oligoastrocytoma
WELL DIFFER OLIGODENDROGLIOMA
Adult Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroglioma, Adult
Adult Oligodendrogliomas
Mixed Oligodendroglioma-Astrocytomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
NCIt:C4050
Oligoastrocytoma[accessedResource: DOID:7912][accessDate: 10-05-2010]
1.5
Oligodendroglioma, Well Differentiated
Mixed Oligodendroglioma-Ependymomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendrogliomas, Anaplastic
Mixed Astrocytic-Oligodendroglial Neoplasm[accessedResource: NCIt:C4050][accessDate: 10-05-2010]
Oligodendrogliomas
Oligodendroblastoma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
CL:0000236
B-Lymphocyte[accessedResource: NCIt:C12474][accessDate: 04-11-2010]
A lymphocyte of B lineage with the phenotype CD19-positive and capable of B cell mediated immunity.[accessedResource: CL:0000236][accessDate: 04-11-2010]
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.
B-Cells
Bursa-Equivalent Lymphocyte
B cell
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.[accessedResource: NCIt:C12474][accessDate: 04-11-2010]
B-Lymphocytes
James Malone
B Cells[accessedResource: NCIt:C12474][accessDate: 04-11-2010]
NCIt:C12474
A lymphocyte of B lineage with the phenotype CD19-positive and capable of B cell mediated immunity.
Bursa-Dependent Lymphocytes[accessedResource: NCIt:C12474][accessDate: 04-11-2010]
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.
B lymphocyte
Bursa-Equivalent Lymphocyte[accessedResource: NCIt:C12474][accessDate: 04-11-2010]
B-Lymphocytes[accessedResource: NCIt:C12474][accessDate: 04-11-2010]
Bursa-Dependent Lymphocytes
http://www.ebi.ac.uk/efo/EFO_0001895
CHEBI:50739
A substance that possess antiestrogenic actions but can also produce estrogenic effects as well. It acts as complete or partial agonist or as antagonist. It can be either steroidal or nonsteroidal in structure.
estrogen receptor modulator
James Malone
Cochlea
The snail shell-shaped auditory component of the inner ear. It contains the sensory organ of hearing.
FMAID:60201
Cochlear
SAEL:21
EV:0100363
Tomasz Adamusiak
NCIt:C12395
Cochlea[accessedResource: FMAID:60201][accessDate: 04-11-2010]
BTO:0000267
Cochlear Organ
Cochlear part of bony labyrinth
XAO:0000197
A division of the bony labyrinth of the inner ear of higher vertebrates that is usually coiled like a snail shell and is the seat of the hearing organ.
EHDAA:4716
James Malone
EMAPA:17597
MA:0000240
Cochlear[accessedResource: NCIt:C12395][accessDate: 04-11-2010]
A division of the bony labyrinth of the inner ear of higher vertebrates that is usually coiled like a snail shell and is the seat of the hearing organ.[accessedResource: BTO:0000267][accessDate: 04-11-2010]
NIFSTD:birnlex_1190
cochlea structure
Cochlear Organ[accessedResource: NCIt:C12395][accessDate: 04-11-2010]
MAT:0000144
The snail shell-shaped auditory component of the inner ear. It contains the sensory organ of hearing.[accessedResource: NCIt:C12395][accessDate: 04-11-2010]
A malignant, invasive embryonal neoplasm arising from the cerebellum. It occurs predominantly in children and has the tendency to metastasize via the cerebrospinal fluid pathways. Signs and symptoms include truncal ataxia, disturbed gait, lethargy, headache, and vomiting. There are four histologic variants: classic medulloblastoma, desmoplastic medulloblastoma, large cell medulloblastoma, and medulloblastoma with extensive nodularity and advanced neuronal differentiation. (from NCI Thesuarus)
medulloblastoma
James Malone
The largest subdivision of the diencephalon that consists chiefly of an ovoid mass of nuclei in each lateral wall of the third ventricle and functions in the integration of sensory information.[accessedResource: BTO:0001365][accessDate: 04-11-2010]
Dorsal thalamus
Multi-tissue structure that is paired, and is situated one on either side of and forming part of the lateral wall of the third ventricle.
future thalamus
SAEL:105
Tomasz Adamusiak
The largest subdivision of the diencephalon that consists chiefly of an ovoid mass of nuclei in each lateral wall of the third ventricle and functions in the integration of sensory information.
ZFA:0001215
MA:0000179
thalamus
EV:0100195
thalami[accessedResource: ZFA:0001215][accessDate: 04-11-2010]
BTO:0001365
NIFSTD:birnlex_954
FMAID:62007
Dorsal thalamus[accessedResource: FMAID:62007][accessDate: 04-11-2010]
Dorsal thalamus (Anthoney)[accessedResource: FMAID:62007][accessDate: 04-11-2010]
EMAPA:17540
Dorsal thalamus (Anthoney)
TAO:0001215
Multi-tissue structure that is paired, and is situated one on either side of and forming part of the lateral wall of the third ventricle.[accessedResource: ZFA:0001215][accessDate: 04-11-2010]
MAT:0000109
future thalamus[accessedResource: MAT:0000109][accessDate: 04-11-2010]
thalami
EHDAA:3482
MAT:0000337
FBbt:00005802
A medial cleft or depression dividing the left and right protocerebrum and containing numerous large and small somata of neurosecretory and neuromodulatory neurons.
A medial cleft or depression dividing the left and right protocerebrum and containing numerous large and small somata of neurosecretory and neuromodulatory neurons.[accessedResource: FBbt:00005802][accessDate: 04-11-2010]
pars intercerebralis
James Malone
James Malone
EHDAA:9144
MA:0000347
A fleshy movable process of the floor of the mouths of most vertebrates that bears sensory end organs and small glands and functions especially in taking and swallowing food and in humans as a speech organ.[accessedResource: BTO:0001385][accessDate: 04-11-2010]
SAEL:109
MAT:0000040
EMAPA:18870
EV:0100058
A fleshy movable process of the floor of the mouths of most vertebrates that bears sensory end organs and small glands and functions especially in taking and swallowing food and in humans as a speech organ.
XAO:0000446
FMAID:54640
BTO:0001385
tongue
http://www.ebi.ac.uk/efo/EFO_0001445
A data set is an information entity that is an aggregate of other information entities that have something in common and are considered to form a unit.
data set
James Malone
James Malone
An agent that selectively binds to and activates beta-adrenergic receptors.
beta-adrenergic receptor agonist
http://www.ebi.ac.uk/efo/EFO_0001843
beta-adrenergic agonist
beta-adrenergic agonists
CHEBI:35522
beta-adrenoceptor agonists
FBbt:00001791
dorsal histoblast nest abdominal
James Malone
NAMALWA
James Malone
Ele Holloway
FBbt:00000449
spindle cells
AMP
spindle cells[accessedResource: FBbt:00000449][accessDate: 04-11-2010]
AMP[accessedResource: FBbt:00000449][accessDate: 04-11-2010]
adult midgut precursor
James Malone
true
%
A dimensionless ratio unit which denotes numbers as fractions of 100.
percent
aerial part
James Malone
aerial body
Existing or growing in the air rather than in the ground or in water.
BTO:0001658
aerial body[accessedResource: BTO:0001658][accessDate: 04-11-2010]
aerial tissue[accessedResource: BTO:0001658][accessDate: 04-11-2010]
aerial tissue
Existing or growing in the air rather than in the ground or in water.[accessedResource: BTO:0001658][accessDate: 04-11-2010]
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Unit_per_Milliliter
U/ml
unit per milliliter
An immature T cell located in the thymus.[accessedResource: CL:0000893][accessDate: 04-11-2010]
thymocyte
CL:0000084
thymic lymphocyte
T-cell[accessedResource: CL:0000084][accessDate: 04-11-2010]
Tomasz Adamusiak
immature T cell[accessedResource: CL:0000893][accessDate: 04-11-2010]
immature T-lymphocyte[accessedResource: CL:0000893][accessDate: 04-11-2010]
T-lymphocyte[accessedResource: CL:0000084][accessDate: 04-11-2010]
immature T lymphocyte
T-lymphocyte
immature T-cell
A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.[accessedResource: CL:0000084][accessDate: 04-11-2010]
An immature T cell located in the thymus.
thymic lymphocyte[accessedResource: CL:0000893][accessDate: 04-11-2010]
mature T cell[accessedResource: CL:0000084][accessDate: 04-11-2010]
A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.
mature T cell
CL:0000893
T cell
metabolic syndrome
James Malone
293TsiLL
James Malone
The pharyngula is a developmental stage in embryonic development which follows the blastula, gastrula and neurula stages.
pharyngula stage
James Malone
https://www.cbil.upenn.edu/RADQuerier/php/displayStudy.php?study_id=449
Athero-protected regions of aorta.
undisturbed flow regions
Tomasz Adamusiak
Jie Zheng
The lateral prominence of the pelvis from the waist to the thigh.[accessedResource: C64193][accessDate: 04-11-2010]
BTO:0001457
C64193
hip
The lateral prominence of the pelvis from the waist to the thigh.
The laterally projecting region of each side of the lower or posterior part of the mammalian trunk formed by the lateral parts of the pelvis and upper part of the femur together with the fleshy parts covering them.
James Malone
The hip is an animal body part which is the laterally projecting region of each side of the lower or posterior part of the mammalian trunk formed by the lateral parts of the pelvis and upper part of the femur together with the fleshy parts covering them.
The laterally projecting region of each side of the lower or posterior part of the mammalian trunk formed by the lateral parts of the pelvis and upper part of the femur together with the fleshy parts covering them.[accessedResource: BTO:0001457][accessDate: 04-11-2010]
SNU1
James Malone
Ele Holloway
Any disease which affects part of the skeletal system.
skeletal system disease
James Malone
CVI - Common variable immunodeficiency[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
GeneRIF:12759461
NCIt:C26725
GeneRIF:16007086
acquired Agammaglobulinemia
CVAG[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
Common variable agammaglobulinemia
GeneRIF:15598813
Heterogeneous group of immunodeficiency syndromes characterized by hypogammaglobulinemia of most isotypes, variable B-cell defects, and the presence of recurrent bacterial infections.[accessedResource: MSH:D017074][accessDate: 04-11-2010]
CVID[accessedResource: DOID:12177][accessDate: 04-11-2010]
Common variable agammaglobulinemia (disorder)
Acquired hypogammaglobulinaemia[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
Common Variable Immunodeficiencies[accessedResource: MSH:D017074][accessDate: 04-11-2010]
acquired Agammaglobulinemia[accessedResource: DOID:12177][accessDate: 04-11-2010]
CVI - Common variable immunodeficiency
MSH:D017074
Common variable agammaglobulinemia[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
Late onset immunoglobulin deficiency
common variable immunodeficiency
COMMON VARIABL IMMUNODEF[accessedResource: ICD9:279.06][accessDate: 04-11-2010]
Common variable hypogammaglobulinaemia[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
A hypogammaglobulinemia that is results in insufficient production of antibodies needed to respond to exposure of pathogens and is characterized by low Ig levels with phenotypically normal B cells that can proliferate but do not develop into Ig-producing cells. Patients with common variable immunodeficiency have marked reduction in serum levels of both immunoglobulin G (IgG) and immunoglobulin A (IgA); about half of these patients also have reduced immunoglobulin M (IgM).
James Malone
A hypogammaglobulinemia that is results in insufficient production of antibodies needed to respond to exposure of pathogens and is characterized by low Ig levels with phenotypically normal B cells that can proliferate but do not develop into Ig-producing cells. Patients with common variable immunodeficiency have marked reduction in serum levels of both immunoglobulin G (IgG) and immunoglobulin A (IgA); about half of these patients also have reduced immunoglobulin M (IgM).[accessedResource: DOID:12177][accessDate: 04-11-2010]
Sporadic hypogammaglobulinemia
Common variable agammaglobulinemia (disorder)[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
Common variable agammaglobulinaemia[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
GeneRIF:15507387
SNOMEDCT:23238000
CVAG
CVID - Common variable immunodeficiency[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
acquired hypogammaglobulinemia
Sporadic hypogammaglobulinemia[accessedResource: DOID:12177][accessDate: 04-11-2010]
GeneRIF:12100033
CVID - Common variable immunodeficiency
A primary immunodeficiency characterized by low levels or absence of all the immunoglobulin classes and lack of B-lymphocytes or plasma cells. It results in recurrent bacterial infections. Complications include autoimmune phenomena and cancer development.[accessedResource: NCIt:C26725][accessDate: 04-11-2010]
Common variable hypogammaglobulinemia[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
acquired hypogammaglobulinemia[accessedResource: DOID:12177][accessDate: 04-11-2010]
GeneRIF:15817684
IMMUNODEFIC COMMON VARIABLE[accessedResource: MSH:D017074][accessDate: 04-11-2010]
A primary immunodeficiency characterized by low levels or absence of all the immunoglobulin classes and lack of B-lymphocytes or plasma cells. It results in recurrent bacterial infections. Complications include autoimmune phenomena and cancer development.
Common variable agammaglobulinaemia
DOID:12177
Common variable hypogammaglobulinaemia
ICD9:279.06
CVID
COMMON VARIABL IMMUNODEF
Common Variable Immunodeficiencies
COMMON VARIABLE IMMUNODEFIC
Heterogeneous group of immunodeficiency syndromes characterized by hypogammaglobulinemia of most isotypes, variable B-cell defects, and the presence of recurrent bacterial infections.
Common variable hypogammaglobulinemia
Late onset immunoglobulin deficiency[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
Acquired hypogammaglobulinaemia
GeneRIF:16007087
insecticides
http://www.ebi.ac.uk/efo/EFO_0001825
CHEBI:24852
A substance used to destroy pests of the class Insecta.
insecticide
James Malone
LS1034
James Malone
Ele Holloway
calcium channel blockers
http://www.ebi.ac.uk/efo/EFO_0001867
CHEBI:38215
One of a class of drugs that acts by selective inhibition of calcium influx through cell membranes or on the release and binding of calcium in intracellular pools.
calcium channel blocker
James Malone
Deficiencies, Respiratory Chain[accessedResource: MSH:D028361][accessDate: 04-11-2010]
Mitochondrial Respiratory Chain Deficiencies
RESPIRATORY CHAIN DEFIC MITOCHONDRIAL
Electron Transport Chain Deficiencies, Mitochondrial[accessedResource: MSH:D028361][accessDate: 04-11-2010]
Diseases caused by abnormal function of the MITOCHONDRIA. They may be caused by mutations, acquired or inherited, in mitochondrial DNA or in nuclear genes that code for mitochondrial components. They may also be the result of acquired mitochondria dysfunction due to adverse effects of drugs, infections, or other environmental causes.
Mitochondrial Electron Transport Chain Deficiencies
GeneRIF:15571233
GeneRIF:14746906
Mitochondrial Disorders[accessedResource: MSH:D028361][accessDate: 04-11-2010]
mitochondrial disease/disorder
Deficiencies, Respiratory Chain
ELECTRON TRANSPORT CHAIN DEFIC MITOCHONDRIAL[accessedResource: MSH:D028361][accessDate: 04-11-2010]
Mitochondrial Respiratory Chain Deficiencies[accessedResource: MSH:D028361][accessDate: 04-11-2010]
OX PHOS DEFIC[accessedResource: MSH:D028361][accessDate: 04-11-2010]
ELECTRON TRANSPORT CHAIN DEFIC MITOCHONDRIAL
Deficiencies, Oxidative Phosphorylation
RESPIRATORY CHAIN DEFIC MITOCHONDRIAL[accessedResource: MSH:D028361][accessDate: 04-11-2010]
Disease, Mitochondrial[accessedResource: MSH:D028361][accessDate: 04-11-2010]
Respiratory Chain Deficiency
GeneRIF:12111367
hyperglycaemia
mitochondrial disease
GeneRIF:14506721
MITOCHONDRIAL DIS[accessedResource: MSH:D028361][accessDate: 04-11-2010]
Mitochondrial Diseases
Mitochondrial Diseases[accessedResource: MSH:D028361][accessDate: 04-11-2010]
OX PHOS DEFIC
Diseases caused by abnormal function of the MITOCHONDRIA. They may be caused by mutations, acquired or inherited, in mitochondrial DNA or in nuclear genes that code for mitochondrial components. They may also be the result of acquired mitochondria dysfunction due to adverse effects of drugs, infections, or other environmental causes.[accessedResource: MSH:D028361][accessDate: 04-11-2010]
Deficiency, Oxidative Phosphorylation[accessedResource: MSH:D028361][accessDate: 04-11-2010]
James Malone
MITOCHONDRIAL DIS
Deficiency, Oxidative Phosphorylation
Disorders, Mitochondrial
mitochondrial disease/disorder[accessedResource: DOID:700][accessDate: 04-11-2010]
Deficiencies, Oxidative Phosphorylation[accessedResource: MSH:D028361][accessDate: 04-11-2010]
mitochondrial disorder
Deficiency, Respiratory Chain[accessedResource: MSH:D028361][accessDate: 04-11-2010]
DOID:700
MSH:D028361
http://www.arabidopsis.org/servlets/TairObject?id=1005158844&type=germplasm
CS57820 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158844&type=germplasm
CS57820
James Malone
hormone sexuelle
sex hormones
Sexualhormon
CHEBI:50112
Any hormone that is responsible for controlling sexual characteristics and reproductive function.
Sexualhormone
http://www.ebi.ac.uk/efo/EFO_0001883
sex hormone
hormones sexuelles
Geschlechtshormone
James Malone
Geschlechtshormon
true
ng/ml
nanogram per milliliter
James Malone
SW620
James Malone
Ele Holloway
MO_59
Family history is a form of clinicaly history specifically about relevant aspects of genetic preconditions or family member's clinical history.
family history
Tomasz Adamusiak
Jie Zheng
James Malone
PO:0008037
BTO:0001228
The embryonic product of the germination of a seed; the young shoot and root axis.
The embryonic product of the germination of a seed; the young shoot and root axis.[accessedResource: BTO:0001228][accessDate: 04-11-2010]
seedling
James Malone
proximal renal artery
Tomasz Adamusiak
Jie Zheng
Colliculus of caudate nucleus
accumbens nucleus
A nucleus forming the floor of the caudal part of the anterior prolongation of the lateral ventricle of the brain.
NCIt:C52733
MA:0000892
FMAID:61889
nucleus accumbens whole
Nucleus accumbens septi
A nucleus forming the floor of the caudal part of the anterior prolongation of the lateral ventricle of the brain.[accessedResource: BTO:0001862][accessDate: 04-11-2010]
MAT:0000512
James Malone
BTO:0001862
[X]Leprosy, unspecified (disorder)[accessedResource: SNOMEDCT:187316006][accessDate: 04-11-2010]
ICD9:030
James Malone
Leprosy NOS (disorder)[accessedResource: SNOMEDCT:186339006][accessDate: 04-11-2010]
ICD9:030.9
GeneRIF:15880118
Leprosy (disorder)[accessedResource: SNOMEDCT:81004002][accessDate: 04-11-2010]
GeneRIF:15072129
Mycobacterium leprae infection
GeneRIF:15755200
Leprosy (disorder)
GeneRIF:14737177
Leprosy, unspecified[accessedResource: ICD9:030.9][accessDate: 04-11-2010]
Other specified leprosy[accessedResource: ICD9:030.8][accessDate: 04-11-2010]
[X]Leprosy, unspecified (disorder)
LEPROSY NOS
Leprosy, unspecified
GeneRIF:15306847
Hansen's disease
leprosy
Leprosy NOS (disorder)
SNOMEDCT:186339006
Other specified leprosy
Hansen's disease[accessedResource: SNOMEDCT:81004002][accessDate: 04-11-2010]
Infection due to Mycobacterium leprae[accessedResource: SNOMEDCT:81004002][accessDate: 04-11-2010]
SNOMEDCT:81004002
GeneRIF:12646604
LEPROSY NEC[accessedResource: ICD9:030.8][accessDate: 04-11-2010]
SNOMEDCT:187316006
DOID:1024
ICD9:030.8
LEPROSY NEC
GeneRIF:15356162
Mycobacterium leprae infection[accessedResource: SNOMEDCT:81004002][accessDate: 04-11-2010]
Infection due to Mycobacterium leprae
[X]Leprosy, unspecified[accessedResource: SNOMEDCT:187316006][accessDate: 04-11-2010]
GeneRIF:12447749
Leprosy, NOS[accessedResource: SNOMEDCT:81004002][accessDate: 04-11-2010]
[X]Leprosy, unspecified
MCIXC
James Malone
Ele Holloway
A large cell that has a lobulated nucleus, is found especially in the bone marrow, and is the source of blood platelets.[accessedResource: BTO:0000843][accessDate: 04-11-2010]
megacaryocyte[accessedResource: CL:0000556][accessDate: 04-11-2010]
BTO:0000843
megakaryocyte
James Malone
megalokaryocyte[accessedResource: CL:0000556][accessDate: 04-11-2010]
CL:0000556
megalocaryocyte
A giant cell 50 to 100 micron in diameter, with a greatly lobulated nucleus, found in the bone marrow; mature blood platelets are released from its cytoplasm.
megalokaryocyte
megalocaryocyte[accessedResource: CL:0000556][accessDate: 04-11-2010]
A giant cell 50 to 100 micron in diameter, with a greatly lobulated nucleus, found in the bone marrow; mature blood platelets are released from its cytoplasm.[accessedResource: CL:0000556][accessDate: 04-11-2010]
A large cell that has a lobulated nucleus, is found especially in the bone marrow, and is the source of blood platelets.
megacaryocyte
NCIt:C32765
Iliac
The broad, dorsal, upper, and widest of the three principal bones composing either half of the pelvis.
The broad, dorsal, upper, and widest of the three principal bones composing either half of the pelvis.[accessedResource: NCIt:C32765][accessDate: 04-11-2010]
Iliac[accessedResource: NCIt:C32765][accessDate: 04-11-2010]
ilium
Tomasz Adamusiak
phenothiazine neuroleptics
phenothiazine antipsychotics
phenothiazine antipsychotic drugs
http://www.ebi.ac.uk/efo/EFO_0001864
CHEBI:37930
phenothiazine antipsychotic drug
James Malone
Ele Holloway
HCC1599
James Malone
MAT:0000203
balancer organ[accessedResource: MAT:0000203][accessDate: 04-11-2010]
Paired dorsal 'appendage' of the adult mesothoracic segment. It is a freely movable, capitate stalk. It develops from the dorsal mesothoracic disc. It is used for flight balance.
FBbt:00004783
James Malone
balancer organ
Paired dorsal 'appendage' of the adult mesothoracic segment. It is a freely movable, capitate stalk. It develops from the dorsal mesothoracic disc. It is used for flight balance.[accessedResource: FBbt:00004783][accessDate: 04-11-2010]
haltere
FBbt:00004011
dorsomedial neurosecretory cell
James Malone
cow
http://www.ebi.ac.uk/efo/EFO_0002634
Bos taurus, commonly named cattle.
Bos taurus
James Malone
SUM52PE
James Malone
Wikipedia definition, modified by editor.
A twin study is a study design in behavior genetics which aid the study of individual differences between genetically identical twins by highlighting the role of environmental and genetic causes on behavior.
twin study
Tomasz Adamusiak
James Malone
mouse
mice
http://www.ebi.ac.uk/efo/EFO_0002644
Mus (commonly mice) is a small mammal belonging to the order of rodents.
Mus
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158777&type=germplasm
CS57753 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158777&type=germplasm
CS57753
James Malone
FBbt:00005614
embryonic epipharynx
James Malone
SW1353
James Malone
Ele Holloway
Tomasz Adamusiak
James Malone
MO_846
kilogram
kg
true
A kilogram is a mass unit which is equal to the mass of the International Prototype Kilogram kept by the BIPM at Svres, France.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#kg[accessedResource: MO_846][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0001686
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#kg
Jie Zheng
A mass unit which is equal to the mass of the International Prototype Kilogram kept by the BIPM at Svres, France.
An extrapolation into the future of data into a class with specified label.
classifier prediction
James Malone
NCI Metathesaurus: C0483368
MedlinePlus: 001381
Human granulocytic ehrlichiosis
human granulocytic anaplasmosis
James Malone
supraoptic nucleus
James Malone
Ele Holloway
true
absorbed dose unit
A derived unit which is a standard measure of the energy imparted by ionizing radiation to unit mass of matter such as tissue.
abosrbed dose unit
ZFA:0000027
paired fin skeleton
appendicular skeleton
OntologyMappingImporter following MAT:0000278
appendicular skeleton[accessedResource: TAO:0000027][accessDate: 04-11-2010]
TAO:0000027
James Malone
Skeletal system that consists of the paired fins (pectoral or pelvic fins).[accessedResource: TAO:0000027][accessDate: 04-11-2010]
MAT:0000278
Skeletal system that consists of the paired fins (pectoral or pelvic fins).
JAX:004435
B6.Cg-Tg(SOD1-G93A)1Gur/J is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/004435.html
B6.Cg-Tg(SOD1-G93A)1Gur/J
James Malone
segmentation stage
James Malone
Oligodendroblastomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroglioma-Astrocytoma, Mixed
Mixed Astrocytic-Oligodendroglial Tumor
WHO grade II mixed glioma[accessedResource: DOID:7912][accessDate: 04-11-2010]
Mixed Astrocytic-Oligodendroglial Tumor[accessedResource: NCIt:C4050][accessDate: 04-11-2010]
Mixed Oligodendroglioma-Ependymomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
A WHO grade II tumor composed of a conspicuous mixture of two distinct neoplastic cell types morphologically resembling the tumor cells in oligodendroglioma and diffuse astrocytoma. (WHO)[accessedResource: NCIt:C4050][accessDate: 04-11-2010]
Adult Oligodendroglioma
Oligodendrogliomas, Adult[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroblastoma
Oligodendroglioma-Astrocytomas, Mixed[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroglioma, Childhood[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroglioma, Well-Differentiated[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Mixed Oligo-Astrocytoma[accessedResource: NCIt:C4050][accessDate: 04-11-2010]
Mixed Astrocytic-Oligodendroglial Neoplasm[accessedResource: NCIt:C4050][accessDate: 04-11-2010]
Well-Differentiated Oligodendrogliomas
Mixed Oligodendroglioma-Astrocytomas
Well-Differentiated Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendrogliomas, Childhood
oligoastroglioma
MSH:D009837
WELL DIFFER OLIGODENDROGLIOMA
Oligodendroglioma-Ependymoma, Mixed[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroblastomas
Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 04-11-2010]
NCIt:C4050
Oligodendroglioma, Childhood
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)
Mixed Astrocytic-Oligodendroglial Neoplasm
Adult Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 04-11-2010]
A WHO grade II tumor composed of a conspicuous mixture of two distinct neoplastic cell types morphologically resembling the tumor cells in oligodendroglioma and diffuse astrocytoma. (WHO)
Anaplastic Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroglioma
Anaplastic Oligodendroglioma
Mixed Oligodendroglioma Ependymoma
Oligodendrogliomas, Anaplastic
Oligodendrogliomas
WHO Grade II Mixed Glioma
Oligodendrogliomas, Adult
Anaplastic Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 04-11-2010]
DOID:7912
James Malone
Oligodendrogliomas, Childhood[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Mixed Oligo-Astrocytoma
WELL DIFFER OLIGODENDROGLIOMA[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroblastoma[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Well-Differentiated Oligodendroglioma
Mixed Oligodendroglioma Astrocytoma[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Mixed Oligodendroglioma-Ependymomas
oligoastrocytoma
hypopituitarism
Hypopituitarism NOS (disorder)[accessedResource: SNOMEDCT:237681002][accessDate: 04-11-2010]
NCIt:C62591
Syndrome, Sheehan[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Disease, Simmonds
HYPOSECRET SYNDROME ANTERIOR PITUITARY[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Deficient secretion of one OR more pituitary hormones[accessedResource: SNOMEDCT:74728003][accessDate: 04-11-2010]
Panhypopituitarism[accessedResource: MSH:D007018][accessDate: 04-11-2010]
SIMMONDS DIS
Hypopituitarism NOS
Hypopituitarism: [NOS] or [Sheehan's syndrome] or [Simmond's disease] or [Panhypopituitarism]
Pituitary Insufficiency[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Pituitary deficiency[accessedResource: SNOMEDCT:74728003][accessDate: 04-11-2010]
MSH:D007018
Pituitary deficiency
GeneRIF:15928241
Panhypopituitarism, Postpartum
GeneRIF:15800844
Pituitary failure
Pituitary failure[accessedResource: SNOMEDCT:74728003][accessDate: 04-11-2010]
Hypopituitarism (disorder)[accessedResource: DOID:9406][accessDate: 04-11-2010]
SNOMEDCT:74728003
GeneRIF:14714741
GeneRIF:12651888
Postpartum Pituitary Insufficiency
Pituitary insufficiency NOS[accessedResource: DOID:9406][accessDate: 04-11-2010]
Hypopituitarism NOS (disorder)
Hypopituitarism (disorder)
ADENOHYPOPHYSEAL HYPOSECRET
Hyposecretion Syndrome, Anterior Pituitary
Panhypopituitarism, Postpartum[accessedResource: MSH:D007018][accessDate: 04-11-2010]
GeneRIF:14581620
Syndrome, Sheehan
GeneRIF:12717343
SNOMEDCT:237681002
ADENOHYPOPHYSEAL HYPOSECRET[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Pituitary hypofunction
Pituitary Insufficiency, Postpartum[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Hypopituitarism, Postpartum
HYPOSECRET SYNDROME ANTERIOR PITUITARY
Insufficiency, Pituitary
Hyposecretion, Adenohypophyseal[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Hypopituitarism NOS[accessedResource: SNOMEDCT:237681002][accessDate: 04-11-2010]
Sheehans Syndrome[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Simmonds Disease[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Hypopituitarism, Postpartum[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Panhypopituitarism
Hypopituitarism: [NOS] or [Sheehan's syndrome] or [Simmond's disease] or [Panhypopituitarism][accessedResource: DOID:9406][accessDate: 04-11-2010]
DOID:9406
Syndrome, Sheehan's
Pituitary insufficiency, NOS
Deficient secretion of one OR more pituitary hormones
Sheehans Syndrome
A condition of diminution or cessation of secretion of one or more hormones from the anterior pituitary gland. This may result from surgical or radiation ablation, non-secretory pituitary neoplasms, metastatic tumors, infarction, pituitary apoplexy, infiltrative or granulomatous processes, and other conditions.
Simmond's Disease[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Diminution or cessation of secretion of one or more hormones from the anterior pituitary gland (including LH; FOLLICLE STIMULATING HORMONE; SOMATOTROPIN; and CORTICOTROPIN). This may result from surgical or radiation ablation, non-secretory PITUITARY NEOPLASMS, metastatic tumors, infarction, PITUITARY APOPLEXY, infiltrative or granulomatous processes, and other conditions.
Syndrome, Sheehan's[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Anterior Pituitary Hyposecretion Syndrome[accessedResource: MSH:D007018][accessDate: 04-11-2010]
James Malone
A condition of diminution or cessation of secretion of one or more hormones from the anterior pituitary gland. This may result from surgical or radiation ablation, non-secretory pituitary neoplasms, metastatic tumors, infarction, pituitary apoplexy, infiltrative or granulomatous processes, and other conditions.[accessedResource: NCIt:C62591][accessDate: 04-11-2010]
Pituitary hypofunction[accessedResource: SNOMEDCT:74728003][accessDate: 04-11-2010]
Simmond's Disease
Hyposecretion, Adenohypophyseal
Diminution or cessation of secretion of one or more hormones from the anterior pituitary gland (including LH; FOLLICLE STIMULATING HORMONE; SOMATOTROPIN; and CORTICOTROPIN). This may result from surgical or radiation ablation, non-secretory PITUITARY NEOPLASMS, metastatic tumors, infarction, PITUITARY APOPLEXY, infiltrative or granulomatous processes, and other conditions.[accessedResource: MSH:D007018][accessDate: 04-11-2010]
SIMMONDS DIS[accessedResource: MSH:D007018][accessDate: 04-11-2010]
dorsal midbrain
mesencephalic tectum[accessedResource: TAO:0001353][accessDate: 04-11-2010]
tectum opticum
TAO:0001353
EMAPA:19051
tectal lobe[accessedResource: ZFA:0001353][accessDate: 04-11-2010]
tectum mesencephali[accessedResource: BTO:0001793][accessDate: 04-11-2010]
dorsal midbrain[accessedResource: ZFA:0001353][accessDate: 04-11-2010]
tectum
MA:0000211
Multi-tissue structure that is the dorsal part of the midbrain and develops from the alar plate and is the most complex layered structure in the zebrafish brain.[accessedResource: ZFA:0001353][accessDate: 04-11-2010]
Midbrain tectum
tectal lobe
optic tectum
optic tectum[accessedResource: ZFA:0001353][accessDate: 04-11-2010]
James Malone
mesencephalic tectum
The dorsal part of the midbrain including the corpora quadrigemina.
ZFA:0001353
MFO:0080060
Midbrain tectum[accessedResource: FMAID:83902][accessDate: 04-11-2010]
BTO:0001793
Multi-tissue structure that is the dorsal part of the midbrain and develops from the alar plate and is the most complex layered structure in the zebrafish brain.
tectum opticum[accessedResource: ZFA:0001353][accessDate: 04-11-2010]
The dorsal part of the midbrain including the corpora quadrigemina.[accessedResource: BTO:0001793][accessDate: 04-11-2010]
Neuraxis tectum[accessedResource: FMAID:83902][accessDate: 04-11-2010]
Neuraxis tectum
MAT:0000451
FMAID:83902
tectum mesencephali
progressive supranuclear ophthalmoplegia
supranuclear palsy, progressive
Ele Holloway
Steele-Richardson-Olszewski Disease[accessedResource: NIFSTD:birnlex_12697][accessDate: 04-11-2010]
Steele-Richardson-Olszewski Syndrome[accessedResource: NIFSTD:birnlex_12697][accessDate: 04-11-2010]
A degenerative disease of the central nervous system characterized by balance difficulties; OCULAR MOTILITY DISORDERS (supranuclear ophthalmoplegia); DYSARTHRIA; swallowing difficulties; and axial DYSTONIA. Onset is usually in the fifth decade and disease progression occurs over several years. Pathologic findings include neurofibrillary degeneration and neuronal loss in the dorsal MESENCEPHALON; SUBTHALAMIC NUCLEUS; RED NUCLEUS; pallidum; dentate nucleus; and vestibular nuclei (MeSH).[accessedResource: NIFSTD:birnlex_12697][accessDate: 04-11-2010]
Tomasz Adamusiak
Steele-Richardson-Olszewski Disease
progressive supranuclear ophthalmoplegia (disorder)[accessedResource: DOID:678][accessDate: 04-11-2010]
A degenerative disease of the central nervous system characterized by balance difficulties; OCULAR MOTILITY DISORDERS (supranuclear ophthalmoplegia); DYSARTHRIA; swallowing difficulties; and axial DYSTONIA. Onset is usually in the fifth decade and disease progression occurs over several years. Pathologic findings include neurofibrillary degeneration and neuronal loss in the dorsal MESENCEPHALON; SUBTHALAMIC NUCLEUS; RED NUCLEUS; pallidum; dentate nucleus; and vestibular nuclei (MeSH).
DOID:678
Steele-Richardson-Olszewski Syndrome
Progressive Supranuclear Ophthalmoplegia[accessedResource: NIFSTD:birnlex_12697][accessDate: 04-11-2010]
progressive supranuclear ophthalmoplegia (disorder)
NIFSTD:birnlex_12697
James Malone
RGD:1578695
Syracuse High Avoidance
James Malone
myeloid neoplasm
PC-6
James Malone
Ele Holloway
CaCl2
InChI=1/Ca.2ClH/h;2*1H/q+2;;/p-2/fCa.2Cl/h;2*1h/qm;2*-1
[Cl-].[Cl-].[Ca++]
calcium dichloride
An inorganic chloride salt that has formula CaCl2.
InChIKey=UXVMQQNJUSDDNG-HQDHFEKBCV
calcium chloride
Calcium chloride anhydrous
http://jaxmice.jax.org/strain/009265.html
ILSXISS23/TejJ
Tomasz Adamusiak
CL:0000499
A connective tissue cell of an organ found in the loose connective tissue. These are most often associated with the uterine mucosa and the ovary as well as the hematopoietic system and elsewhere.
A connective tissue cell of an organ found in the loose connective tissue. These are most often associated with the uterine mucosa and the ovary as well as the hematopoietic system and elsewhere.[accessedResource: CL:0000499][accessDate: 04-11-2010]
stromal cell
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0002399
aluminium
aluminio
13Al
InChI=1/Al
Ele Holloway
aluminum
CHEBI:28984
InChIKey=XAGFODPZIPBFFR-UHFFFAOYAX
A boron group element atom that has formula Al.
aluminium atom
James Malone
[Al]
A boron group element that has formula Al.
MO_824
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#array_scanner
http://www.ebi.ac.uk/efo/EFO_0002014
An processed material which acquires images of fluorescence (induced with lasers) from labeled molecules on the surface of the microarray chip
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#array_scanner[accessedResource: MO_824][accessDate: 04-11-2010]
array scanner
James Malone
BTO:0001226
PO:0009010
MAT:0000008
GRO:0005339
A matured ovule containing an embryo and food supply and covered by a seed coat.[accessedResource: BTO:0001226][accessDate: 04-11-2010]
James Malone
seed structure
ZEA:0015178
GRO:0005339[accessedResource: BTO:0001226][accessDate: 04-11-2010]
seed[accessedResource: MAT:0000008][accessDate: 04-11-2010]
seed
A matured ovule containing an embryo and food supply and covered by a seed coat.
oropharynx
Oral part of pharynx[accessedResource: FMA:54879][accessDate: 04-11-2010]
Oral part of pharynx
James Malone
NCIt:C12762
The part of the pharynx between the soft palate and the upper portion of the epiglottis.[accessedResource: NCIt:C12762][accessDate: 04-11-2010]
The part of the pharynx between the soft palate and the upper portion of the epiglottis.
FMA:54879
http://www.arabidopsis.org/servlets/TairObject?id=1005158665&type=germplasm
CS57641 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158665&type=germplasm
CS57641
James Malone
GeneRIF:11741828
1.8
Muscular Dystrophies, Limb Girdle
limb girdle muscular dystrophy
GeneRIF:15351423
true
GeneRIF:15385448
GeneRIF:11891182
GeneRIF:15087111
GeneRIF:12499399
Leyden-Mobius muscular dystrophy
obsolete_calpainopathy
Leyden-Mbius muscular dystrophy[accessedResource: DOID:11724][accessDate: 10-05-2010]
GeneRIF:12032588
Leyden-Mbius muscular dystrophy
duplicate of limb-girdle muscular dystrophy EFO_0000758
Limb Girdle Muscular Dystrophy[accessedResource: MSH:D049288][accessDate: 10-05-2010]
Limb-girdle muscular dystrophy (disorder)[accessedResource: SNOMEDCT:93153005][accessDate: 10-05-2010]
SNOMEDCT:93153005
GeneRIF:14600260
James Malone
A heterogenous group of inherited muscular dystrophy that can be autosomal dominant or autosomal recessive. There are many forms (called LGMDs) involving genes encoding muscle membrane proteins such as the sarcoglycan (SARCOGLYCANS) complex that interacts with DYSTROPHIN. The disease is characterized by progressing wasting and weakness of the proximal muscles of arms and legs around the HIPS and SHOULDERS (the pelvic and shoulder girdles).[accessedResource: MSH:D049288][accessDate: 10-05-2010]
Leyden-Mobius muscular dystrophy[accessedResource: SNOMEDCT:93153005][accessDate: 10-05-2010]
GeneRIF:16344347
GeneRIF:14981167
MSH:D049288
DOID:11724
Limb-girdle muscular dystrophy (disorder)
GeneRIF:12428213
A heterogenous group of inherited muscular dystrophy that can be autosomal dominant or autosomal recessive. There are many forms (called LGMDs) involving genes encoding muscle membrane proteins such as the sarcoglycan (SARCOGLYCANS) complex that interacts with DYSTROPHIN. The disease is characterized by progressing wasting and weakness of the proximal muscles of arms and legs around the HIPS and SHOULDERS (the pelvic and shoulder girdles).
GeneRIF:11822024
Limb-Girdle Muscular Dystrophies[accessedResource: MSH:D049288][accessDate: 10-05-2010]
limb-girdle muscular dystrophy type 2A
tamoxifenum
InChIKey=NKANXQFJJICGDU-QPLCGJKRBF
tamoxifeno
CC\\C(c1ccccc1)=C(/c1ccccc1)c1ccc(OCCN(C)C)cc1
Crisafeno
Apo-Tamox
tamoxifen
(Z)-2-(para-(1,2-Diphenyl-1-butenyl)phenoxy)-N,N-dimethylamine
1-para-beta-Dimethylaminoethoxyphenyl-trans-1,2-diphenylbut-1-ene
C26H29NO
http://www.ebi.ac.uk/efo/EFO_0001621
Diemon
A tertiary amine that has formula C26H29NO.
CHEBI:41774
trans-Tamoxifen
2-{4-[(1Z)-1,2-diphenylbut-1-en-1-yl]phenoxy}-N,N-dimethylethanamine
tamoxifene
InChI=1/C26H29NO/c1-4-25(21-11-7-5-8-12-21)26(22-13-9-6-10-14-22)23-15-17-24(18-16-23)28-20-19-27(2)3/h5-18H,4,19-20H2,1-3H3/b26-25-
(Z)-2-(4-(1,2-Diphenyl-1-butenyl)phenoxy)-N,N-dimethylethanamine
James Malone
1-p-beta-Dimethylaminoethoxyphenyl-trans-1,2-diphenylbut-1-ene
BTO:0001784
Peyer's gland[accessedResource: BTO:0001784][accessDate: 04-11-2010]
Peyers Patch (MMHCC)[accessedResource: NCIt:C22562][accessDate: 04-11-2010]
Peyer's gland
Any of numerous large oval patches of closely aggregated nodules of lymphoid tissue in the walls of the small intestine esp. in the ileum that partially or entirely disappear in advanced life and in typhoid fever become the seat of ulcers which may perforate the intestines.
Peyer's patch
James Malone
NCIt:C22562
Peyers Patch (MMHCC)
Any of numerous large oval patches of closely aggregated nodules of lymphoid tissue in the walls of the small intestine esp. in the ileum that partially or entirely disappear in advanced life and in typhoid fever become the seat of ulcers which may perforate the intestines.[accessedResource: BTO:0001784][accessDate: 04-11-2010]
by a caterpillar on a plant leaf
A measurement of physical damage, e.g. by a caterpillar on a plant leaf
damage intensity
James Malone
FBbt:00005055
EV:0100056
FMAID:7152
EMAPA:16246
MAT:0000018
The organ system involved in the absorption of nutrients.
Digestive system
digestive system component
digestive system[accessedResource: FBbt:00005055][accessDate: 04-11-2010]
The organ system involved in the absorption of nutrients.[accessedResource: FBbt:00005055][accessDate: 04-11-2010]
James Malone
TAO:0000339
MFO:0002980
ZFA:0000339
XAO:0000125
alimentary system
gastrointestinal system[accessedResource: MAT:0000018][accessDate: 04-11-2010]
gastrointestinal system
TADS:0000170
EHDAA:514
AAO:0000129
SAEL:28
MA:0000323
WBbt:0005748
Alimentary system[accessedResource: FMAID:7152][accessDate: 04-11-2010]
true
ppb
10^[-9]
A dimensionless concentration notation which denotes the amount of a given substance in a total amount of 1,000,000,000 regardless of the units of measure as long as they are the same or 1 part in 10^[9].
parts per billion
MO_553
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#RNA_stability_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#RNA_stability_design[accessedResource: MO_553][accessDate: 04-11-2010]
RNA stability design
Tomasz Adamusiak
NIFSTD:sao2254405550
population
Tomasz Adamusiak
true
http://www.ebi.ac.uk/efo/EFO_0000664
James Malone
A population is a material entity consisting of individuals which share a particular characteristic such as inhabiting a particular region or area or ability to interbreed.
A collection of independent organismal entities engaged in some form of spatio-temporal interaction or aggregate behavior
A collection of independent organismal entities engaged in some form of spatio-temporal interaction or aggregate behavior[accessedResource: NIFSTD:sao2254405550][accessDate: 04-11-2010]
a population is a collection of individuals from the same taxonomic class living, counted or sampled at a particular site or in a particular area
Duchenne musc. dyst.
Pseudohypertrophic muscular dystrophy[accessedResource: SNOMEDCT:76670001][accessDate: 04-11-2010]
GeneRIF:12031623
Muscular Dystrophy, Becker
GeneRIF:12619170
GeneRIF:11922612
Childhood Muscular Dystrophy, Pseudohypertrophic
DOID:11723
An X-linked recessive muscle disease caused by an inability to synthesize DYSTROPHIN, which is involved with maintaining the integrity of the sarcolemma. Muscle fibers undergo a process that features degeneration and regeneration. Clinical manifestations include proximal weakness in the first few years of life, pseudohypertrophy, cardiomyopathy (see MYOCARDIAL DISEASES), and an increased incidence of impaired mentation. Becker muscular dystrophy is a closely related condition featuring a later onset of disease (usually adolescence) and a slowly progressive course. (Adams et al., Principles of Neurology, 6th ed, p1415)[accessedResource: MSH:D020388][accessDate: 04-11-2010]
An X-linked recessive muscle disease caused by an inability to synthesize DYSTROPHIN, which is involved with maintaining the integrity of the sarcolemma. Muscle fibers undergo a process that features degeneration and regeneration. Clinical manifestations include proximal weakness in the first few years of life, pseudohypertrophy, cardiomyopathy (see MYOCARDIAL DISEASES), and an increased incidence of impaired mentation. Becker muscular dystrophy is a closely related condition featuring a later onset of disease (usually adolescence) and a slowly progressive course. (Adams et al., Principles of Neurology, 6th ed, p1415)
Muscular Dystrophies, Pseudohypertrophic[accessedResource: MSH:D020388][accessDate: 04-11-2010]
GeneRIF:12609501
SNOMEDCT:76670001
GeneRIF:11968010
DMD - Duchenne muscular dystrophy
James Malone
GeneRIF:14511675
Becker Muscular Dystrophy[accessedResource: MSH:D020388][accessDate: 04-11-2010]
Duchenne Type Progressive Muscular Dystrophy
DMD - Duchenne muscular dystrophy[accessedResource: SNOMEDCT:76670001][accessDate: 04-11-2010]
GeneRIF:12920092
GeneRIF:12754415
Childhood Pseudohypertrophic Muscular Dystrophy[accessedResource: MSH:D020388][accessDate: 04-11-2010]
GeneRIF:16295426
Progressive Muscular Dystrophy, Duchenne Type[accessedResource: MSH:D020388][accessDate: 04-11-2010]
GeneRIF:15111323
Muscular Dystrophy, Pseudohypertrophic
GeneRIF:12798793
Duchenne muscular dystrophy (disorder)[accessedResource: SNOMEDCT:76670001][accessDate: 04-11-2010]
GeneRIF:12206800
GeneRIF:15328150
GeneRIF:12387876
GeneRIF:15616792
MSH:D020388
GeneRIF:12754707
GeneRIF:14652441
Duchenne muscular dystrophy
Duchenne musc. dyst.[accessedResource: DOID:11723][accessDate: 04-11-2010]
GeneRIF:14631123
GeneRIF:12459784
Duchenne muscular dystrophy (disorder)
Dystrophies, Pseudohypertrophic Muscular
diaphragm
James Malone
EV:0100376
future diaphragm
future diaphragm[accessedResource: MAT:0000502][accessDate: 04-11-2010]
FMAID:13295
diaphragm muscle
BTO:0000341
Thoracic diaphragm
The thin muscle below the lungs and heart that separates the chest from the abdomen.
EMAPA:17701
EHDAA:4104
MAT:0000502
Thoracic diaphragm[accessedResource: FMAID:13295][accessDate: 04-11-2010]
The thin muscle below the lungs and heart that separates the chest from the abdomen.[accessedResource: BTO:0000341][accessDate: 04-11-2010]
diaphragm muscle[accessedResource: BTO:0000341][accessDate: 04-11-2010]
NCI-H1651
James Malone
Ele Holloway
DBTRG05MG
James Malone
DBTRG-05MG
CC(=C)[C@H]1CN[C@@H]([C@H]1CC(O)=O)C(O)=O
CHEBI:31746
A pyrrolidinemonocarboxylic acid that has formula C10H15NO4.
acidum kainicum
Digenin
Digensaeure
(2S-(2alpha,3beta,4beta))-2-carboxy-4-(1-methylethenyl)-3-pyrrolidineacetic acid
kainic acid
acido kainico
InChI=1/C10H15NO4/c1-5(2)7-4-11-9(10(14)15)6(7)3-8(12)13/h6-7,9,11H,1,3-4H2,2H3,(H,12,13)(H,14,15)/t6-,7+,9-/m0/s1/f/h12,14H
alpha-Kainic acid
Kainsaeure
digenic acid
acide kainique
InChIKey=VLSMHEGGTFMBBZ-WODSAOQMDB
James Malone
Helminal
http://www.ebi.ac.uk/efo/EFO_0001561
L-alpha-kainic acid
(3S,4R)-3-(carboxymethyl)-4-(prop-1-en-2-yl)-L-proline
(3beta,5alpha,22beta,25S)-spirosolan-3-yl O-beta-D-glucopyranosyl-(1->2)-O-(beta-D-xylopyranosyl)-(1->3)-O-beta-D-glucopyranosyl-(1->4)-beta-D-galactopyranoside
CHEBI:9630
http://www.ebi.ac.uk/efo/EFO_0001628
A spirostanyl glycoside that has formula C50H83NO21.
InChIKey=REJLGAUYTKNVJM-SGXCCWNXBK
tomatine
lycopersicin
InChI=1/C50H83NO21/c1-20-7-12-50(51-15-20)21(2)32-28(72-50)14-26-24-6-5-22-13-23(8-10-48(22,3)25(24)9-11-49(26,32)4)65-45-40(63)37(60)41(31(18-54)68-45)69-47-43(71-46-39(62)36(59)34(57)29(16-52)66-46)42(35(58)30(17-53)67-47)70-44-38(61)33(56)27(55)19-64-44/h20-47,51-63H,5-19H2,1-4H3/t20-,21-,22-,23-,24+,25-,26-,27+,28-,29+,30+,31+,32-,33-,34+,35+,36-,37+,38+,39+,40+,41-,42-,43+,44-,45+,46-,47-,48-,49-,50-/m0/s1
A''-Tomatidine
C50H83NO21
James Malone
alpha-tomatine
[H][C@@]12CC[C@]3([H])[C@]([H])(CC[C@@]4(C)[C@@]3([H])C[C@]3([H])O[C@@]5(CC[C@H](C)CN5)[C@@H](C)[C@]43[H])[C@@]1(C)CC[C@@H](C2)O[C@@H]1O[C@H](CO)[C@H](O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O[C@@H]3OC[C@@H](O)[C@H](O)[C@H]3O)[C@H]2O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O
(22S,25S)-5alpha-spirosolan-3beta-yl beta-D-glucopyranosyl-(1->2)-[beta-D-xylopyranosyl-(1->3)]-beta-D-glucopyranosyl-(1->4)-beta-D-galactopyranoside
HCC[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
Carcinoma of Liver Cells
A malignant tumor that arises from hepatocytes. Hepatocellular carcinoma is relatively rare in the United States but very common in all African countries south of the Sahara and in Southeast Asia. Most cases are seen in patients over the age of 50 years, but this tumor can also occur in younger individuals and even in children. Hepatocellular carcinoma is more common in males than females and is associated with hepatitis B, hepatitis C, chronic alcohol abuse and cirrhosis. Serum elevation of alpha-fetoprotein occurs in a large percentage of patients with hepatocellular carcinoma. Grossly, hepatocellular carcinoma may present as a single mass, as multiple nodules, or as diffuse liver involvement. Microscopically, there is a wide range of differentiation from tumor to tumor (well differentiated to poorly differentiated tumors). Hepatocellular carcinomas quickly metastasize to regional lymph nodes and lung. The overall median survival of untreated liver cell carcinoma is about 4 months. The most effective treatment of hepatocellular carcinoma is complete resection of the tumor. Lately, an increasing number of tumors have been treated with liver transplantation.
A malignant tumor that arises from hepatocytes. Hepatocellular carcinoma is relatively rare in the United States but very common in all African countries south of the Sahara and in Southeast Asia. Most cases are seen in patients over the age of 50 years, but this tumor can also occur in younger individuals and even in children. Hepatocellular carcinoma is more common in males than females and is associated with hepatitis B, hepatitis C, chronic alcohol abuse and cirrhosis. Serum elevation of alpha-fetoprotein occurs in a large percentage of patients with hepatocellular carcinoma. Grossly, hepatocellular carcinoma may present as a single mass, as multiple nodules, or as diffuse liver involvement. Microscopically, there is a wide range of differentiation from tumor to tumor (well differentiated to poorly differentiated tumors). Hepatocellular carcinomas quickly metastasize to regional lymph nodes and lung. The overall median survival of untreated liver cell carcinoma is about 4 months. The most effective treatment of hepatocellular carcinoma is complete resection of the tumor. Lately, an increasing number of tumors have been treated with liver transplantation. --2002
Primary Carcinoma of the Liver Cells[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
Primary Carcinoma of Liver Cells[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
Liver Cell Cancer (Hepatocellular Carcinoma)
Carcinoma of Liver Cells[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
hepatocellular carcinoma
Liver Cell Carcinoma
Carcinoma of the Liver Cells
A malignant tumor that arises from hepatocytes. Hepatocellular carcinoma is relatively rare in the United States but very common in all African countries south of the Sahara and in Southeast Asia. Most cases are seen in patients over the age of 50 years, but this tumor can also occur in younger individuals and even in children. Hepatocellular carcinoma is more common in males than females and is associated with hepatitis B, hepatitis C, chronic alcohol abuse and cirrhosis. Serum elevation of alpha-fetoprotein occurs in a large percentage of patients with hepatocellular carcinoma. Grossly, hepatocellular carcinoma may present as a single mass, as multiple nodules, or as diffuse liver involvement. Microscopically, there is a wide range of differentiation from tumor to tumor (well differentiated to poorly differentiated tumors). Hepatocellular carcinomas quickly metastasize to regional lymph nodes and lung. The overall median survival of untreated liver cell carcinoma is about 4 months. The most effective treatment of hepatocellular carcinoma is complete resection of the tumor. Lately, an increasing number of tumors have been treated with liver transplantation.[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
NCIt:C3099
Carcinoma of the Liver Cells[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
hepatoma
Primary Carcinoma of the Liver Cells
Liver Cell Carcinoma[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
James Malone
Primary Carcinoma of Liver Cells
Hepatoma[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
Liver Cell Cancer (Hepatocellular Carcinoma)[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
HCC
CRL-2266
SH-SY5Y
James Malone
Ele Holloway
Di(2-ethylhexyl) o-phthalate
Bis(2-ethylhexyl)phthalate
InChI=1/C24H38O4/c1-5-9-13-19(7-3)17-27-23(25)21-15-11-12-16-22(21)24(26)28-18-20(8-4)14-10-6-2/h11-12,15-16,19-20H,5-10,13-14,17-18H2,1-4H3
Di-sec-octyl phthalate
DEHP
C24H38O4
A phthalate ester that has formula C24H38O4.
Bis(2-ethylhexyl) o-phthalate
The bis(2-ethylhexyl) ester of 1,2-benzenedicarboxylic acid.
bis(2-ethylhexyl) 1,2-benzenedicarboxylate
Dioctyl phthalate
diethylhexyl phthalate
di-iso-Octyl phthalate
CHEBI:17747
CCCCC(CC)COC(=O)c1ccccc1C(=O)OCC(CC)CCCC
InChIKey=BJQHLKABXJIVAM-UHFFFAOYAB
Di(2-ethylhexyl)orthophthalate
Octyl phthalate
http://www.ebi.ac.uk/efo/EFO_0001521
2-Ethylhexyl phthalate
Di(2-ethylhexyl)phthalate
1,2-Benzenedicarboxylic acid bis(2-ethylhexyl) ester
Phthalic acid di(2-ethylhexyl) ester
Bis(ethylhexyl) phthalate
Phthalic acid bis(2-ethylhexyl) ester
ZFS:0000032
pharyngula high-pec
James Malone
A thin formative layer between the xylem and phloem of most vascular plants that gives rise to new cells and is responsible for secondary growth;nA lateral meristem in vascular plants, including the vascular cambium and cork cambium, that forms parallel rows of cells resulting in secondary tissues.
PO:0005597
The layer of active cells between xylem and phloem that gives rise to secondary tissues (e.g. bark)[accessedResource: MAT:0000223][accessDate: 04-11-2010]
cambium
James Malone
The layer of active cells between xylem and phloem that gives rise to secondary tissues (e.g. bark)
MAT:0000223
GRO:0005597[accessedResource: BTO:0000170][accessDate: 04-11-2010]
GRO:0005597
BTO:0000170
A thin formative layer between the xylem and phloem of most vascular plants that gives rise to new cells and is responsible for secondary growth;nA lateral meristem in vascular plants, including the vascular cambium and cork cambium, that forms parallel rows of cells resulting in secondary tissues.[accessedResource: BTO:0000170][accessDate: 04-11-2010]
James Malone
GrowthCondition[accessedResource: MO_183][accessDate: 04-11-2010]
A role that a material entity can play which enables particular conditions used to grow organisms or parts of the organism. This includes isolated environments such as cultures and open environments such as field studies.
growth condition
Tomasz Adamusiak
GrowthCondition
Jie Zheng
MO_183
Amyotrophic Lateral Sclerosis, Guam Form[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:12217886
GeneRIF:12875980
GeneRIF:14675609
GeneRIF:14642651
GeneRIF:15184633
GeneRIF:14985749
GeneRIF:12502789
GeneRIF:15691826
GeneRIF:12730211
AMYOTROPHIC SCLEROSIS
GeneRIF:11860274
GeneRIF:11854285
GeneRIF:15978558
GeneRIF:11675877
An autosomal dominant inherited form of amyloidosis.
GeneRIF:15910777
GeneRIF:15465081
NIFSTD:birnlex_12566
GeneRIF:15672551
Amyotrophic lateral sclerosis (disorder)
GeneRIF:15264227
GeneRIF:14511332
GeneRIF:15623718
GeneRIF:15076751
GeneRIF:14989597
Amyotrophic Lateral Sclerosis With Dementia[accessedResource: MSH:D000690][accessDate: 04-11-2010]
LOU GEHRIG DIS[accessedResource: MSH:D000690][accessDate: 04-11-2010]
Guam Form of Amyotrophic Lateral Sclerosis
Lateral Scleroses, Amyotrophic
GeneRIF:12437574
GeneRIF:15546588
amyotrophic lateral sclerosis
Lou Gehrig's disease[accessedResource: DOID:332][accessDate: 04-11-2010]
ICD9:335.20
Tomasz Adamusiak
GeneRIF:14991384
GeneRIF:14734542
GeneRIF:15037546
James Malone
GeneRIF:14597108
GeneRIF:12694394
GeneRIF:12614934
GeneRIF:15106121
GeneRIF:12270696
GeneRIF:15652414
GeneRIF:15126567
GeneRIF:11991808
GeneRIF:15475574
GeneRIF:12847526
Amyotrophic Lateral Sclerosis, Guam Form
GeneRIF:12230304
GeneRIF:15837590
GeneRIF:15388334
GeneRIF:12210393
GEHRIGS DIS
GeneRIF:15634772
GeneRIF:15657392
A degenerative disorder affecting upper MOTOR NEURONS in the brain and lower motor neurons in the brain stem and SPINAL CORD. Disease onset is usually after the age of 50 and the process is usually fatal within 3 to 6 years. Clinical manifestations include progressive weakness, atrophy, FASCICULATION, hyperreflexia, DYSARTHRIA, dysphagia, and eventual paralysis of respiratory function. Pathologic features include the replacement of motor neurons with fibrous ASTROCYTES and atrophy of anterior SPINAL NERVE ROOTS and corticospinal tracts (MeSH).[accessedResource: NIFSTD:birnlex_12566][accessDate: 04-11-2010]
GeneRIF:14970233
Gehrig's Disease
Amyotrophic Lateral Sclerosis With Dementia
GeneRIF:15657798
GeneRIF:15094483
GeneRIF:14978393
GeneRIF:15350647
GeneRIF:11943600
GeneRIF:11996514
GeneRIF:12641746
GeneRIF:12235108
ALS (Amyotrophic Lateral Sclerosis)
GeneRIF:15313203
GeneRIF:12679596
Lou Gehrig's Disease
GeneRIF:13129803
GeneRIF:15488469
Lateral Scleroses, Amyotrophic[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:15069187
Gehrig Disease
GeneRIF:12866199
DOID:332
GeneRIF:15006704
GeneRIF:14596848
GeneRIF:15568021
GeneRIF:12458194
Guam Form of Amyotrophic Lateral Sclerosis[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:15789135
GeneRIF:11951178
AMYOTROPHIC SCLEROSIS[accessedResource: ICD9:335.20][accessDate: 04-11-2010]
Gehrigs Disease[accessedResource: MSH:D000690][accessDate: 04-11-2010]
Gehrig Disease[accessedResource: MSH:D000690][accessDate: 04-11-2010]
A degenerative disorder affecting upper MOTOR NEURONS in the brain and lower motor neurons in the brain stem and SPINAL CORD. Disease onset is usually after the age of 50 and the process is usually fatal within 3 to 6 years. Clinical manifestations include progressive weakness, atrophy, FASCICULATION, hyperreflexia, DYSARTHRIA, dysphagia, and eventual paralysis of respiratory function. Pathologic features include the replacement of motor neurons with fibrous ASTROCYTES and atrophy of anterior SPINAL NERVE ROOTS and corticospinal tracts. (From Adams et al., Principles of Neurology, 6th ed, pp1089-94)
Motor Neuron Disease, Amyotrophic Lateral Sclerosis
GeneRIF:12441104
GeneRIF:15753080
GeneRIF:15109247
GeneRIF:12393885
GEHRIGS DIS[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:12870272
GeneRIF:15030390
Motor Neuron Disease, Amyotrophic Lateral Sclerosis[accessedResource: MSH:D000690][accessDate: 04-11-2010]
LOU GEHRIGS DIS
Bulbar motor neuron disease[accessedResource: SNOMEDCT:86044005][accessDate: 04-11-2010]
GeneRIF:12770687
GeneRIF:15776280
GeneRIF:12972170
GeneRIF:15033789
A degenerative disorder affecting upper MOTOR NEURONS in the brain and lower motor neurons in the brain stem and SPINAL CORD. Disease onset is usually after the age of 50 and the process is usually fatal within 3 to 6 years. Clinical manifestations include progressive weakness, atrophy, FASCICULATION, hyperreflexia, DYSARTHRIA, dysphagia, and eventual paralysis of respiratory function. Pathologic features include the replacement of motor neurons with fibrous ASTROCYTES and atrophy of anterior SPINAL NERVE ROOTS and corticospinal tracts. (From Adams et al., Principles of Neurology, 6th ed, pp1089-94)[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:12843244
GeneRIF:15557516
MOTOR NEURON DIS AMYOTROPHIC LATERAL SCLEROSIS[accessedResource: MSH:D000690][accessDate: 04-11-2010]
LOU GEHRIGS DIS[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:12153483
GeneRIF:15330338
GeneRIF:12584731
GeneRIF:12644909
LOU GEHRIG DIS
GeneRIF:15829169
MOTOR NEURON DIS AMYOTROPHIC LATERAL SCLEROSIS
Lou Gehrig Disease[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:12528821
GeneRIF:15233913
GeneRIF:16020530
GeneRIF:14676054
GeneRIF:12442272
GeneRIF:15048885
Amyotrophic lateral sclerosis (disorder)[accessedResource: SNOMEDCT:86044005][accessDate: 04-11-2010]
GeneRIF:16005901
GeneRIF:15509539
GeneRIF:12039658
GeneRIF:12659845
Lou Gehrig Disease
ALS (Amyotrophic Lateral Sclerosis)[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:12138710
Lou Gehrigs Disease[accessedResource: NIFSTD:birnlex_12566][accessDate: 04-11-2010]
ALS[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:12915461
GeneRIF:13678668
SNOMEDCT:86044005
GeneRIF:12475980
GeneRIF:12446576
GeneRIF:15326253
MSH:D000690
GeneRIF:11854284
GeneRIF:12707786
An autosomal dominant inherited form of amyloidosis.[accessedResource: NCIt:C34373][accessDate: 04-11-2010]
Motor neuron disease, bulbar
GeneRIF:12125045
Lou Gehrigs Disease
NCIt:C34373
ALS
GeneRIF:15019581
GeneRIF:14506936
GeneRIF:12677446
A degenerative disorder affecting upper MOTOR NEURONS in the brain and lower motor neurons in the brain stem and SPINAL CORD. Disease onset is usually after the age of 50 and the process is usually fatal within 3 to 6 years. Clinical manifestations include progressive weakness, atrophy, FASCICULATION, hyperreflexia, DYSARTHRIA, dysphagia, and eventual paralysis of respiratory function. Pathologic features include the replacement of motor neurons with fibrous ASTROCYTES and atrophy of anterior SPINAL NERVE ROOTS and corticospinal tracts (MeSH).
GeneRIF:16114275
GeneRIF:12127151
GeneRIF:12448348
GeneRIF:12783432
GeneRIF:12480087
true
obsolete_CTL sensitivity
true
ug/kg
microgram per kilogram
FMAID:13357
latissimus dorsi
Tomasz Adamusiak
James Malone
topoisomerase-II inhibitors
inhibitor of type II topoisomerase
An inhibitor of DNA topoisomerase II, which catalyses ATP-dependent breakage of both strands of DNA, passage of the unbroken strands through the breaks, and rejoining of the broken strands.
topoisomerase II inhibitor
inhibitors of type II topoisomerase
http://www.ebi.ac.uk/efo/EFO_0001896
CHEBI:50750
http://www.arabidopsis.org/servlets/TairObject?id=1005158688&type=germplasm
CS57664 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158688&type=germplasm
CS57664
James Malone
A mature male germ cell that develops from a spermatid.[accessedResource: CL:0000019][accessDate: 04-11-2010]
spermatozoon[accessedResource: CL:0000019][accessDate: 04-11-2010]
plant sperm
James Malone
CL:0000019
sperm cell
spermatozoid
sperm cell[accessedResource: MAT:0000218][accessDate: 04-11-2010]
spermatozoon
sperm
A mature male germ cell that develops from a spermatid.
OntologyMappingImporter following MAT:0000218
sperm[accessedResource: MAT:0000218][accessDate: 04-11-2010]
MAT:0000218
Tomasz Adamusiak
spermatozoid[accessedResource: CL:0000019][accessDate: 04-11-2010]
PO:0000084
FMA:72206
Thymus medulla
Thymus medulla[accessedResource: FMA:72206][accessDate: 04-11-2010]
medulla of thymus
James Malone
Either of a pair of masses of nervous tissue within the brain that contain two large nuclei of gray matter separated by sheets of white matter.[accessedResource: BTO:0001311][accessDate: 04-11-2010]
Neostriatum[accessedResource: NIFSTD:birnlex_1672][accessDate: 04-11-2010]
NIFSTD:birnlex_1672
corpus striatum
James Malone
Striped gray and white matter consisting of the neostriatum and paleostriatum (globus pallidus). It is located in front of and lateral to the thalamus in each cerebral hemisphere. The gray substance is made up of the caudate nucleus and the lentiform nucleus. The white matter is the internal capsule. (MeSH)
Striatum[accessedResource: NCIt:C12448][accessDate: 04-11-2010]
Neostriatum
dorsal striatum
Striate Body
striatum
Either of a pair of masses of nervous tissue within the brain that contain two large nuclei of gray matter separated by sheets of white matter.
NCIt:C12448
BTO:0001311
Striped gray and white matter consisting of the neostriatum and paleostriatum (globus pallidus). It is located in front of and lateral to the thalamus in each cerebral hemisphere. The gray substance is made up of the caudate nucleus and the lentiform nucleus. The white matter is the internal capsule. (MeSH)[accessedResource: NCIt:C12448][accessDate: 04-11-2010]
Striate Body[accessedResource: NCIt:C12448][accessDate: 04-11-2010]
NIFSTD:nlx_anat_20090201
Tomasz Adamusiak
post-mortem
dead
CHEBI:27300
vitamin D
http://www.ebi.ac.uk/efo/EFO_0001636
Vitamin D is a group of fat-soluble prohormones, which can be obtained from sun exposure, food and supplements. Vitamin D is biologically inactive and converted to the biologically active calcicitriol via double hydroxilation in the body.
Vitamin D3
Not needed.
true
The recorded value of the outcome of some test.
obsolete_test result
CHEBI:51953
http://www.ebi.ac.uk/efo/EFO_0002008
polyamide
James Malone
CL:0000813
Tomasz Adamusiak
memory T-lymphocyte
A distinctly differentiated long-lived T cell that has the phenotype CD45RO-positive and CD127-positive.
A distinctly differentiated long-lived T cell that has the phenotype CD45RO-positive and CD127-positive.[accessedResource: CL:0000813][accessDate: 04-11-2010]
BTO:0003435
A T-cell that bears receptors for a specific foreign antigen encountered during a prior infection or vaccination. After an infection or a vaccination, some of the T-cells that participated in the response remain as memory T-cells, which can rapidly mobilize and clone themselves should the same antigen be re-encountered during a second infection at a later time.[accessedResource: BTO:0003435][accessDate: 04-11-2010]
memory T-lymphocyte[accessedResource: CL:0000813][accessDate: 04-11-2010]
A T-cell that bears receptors for a specific foreign antigen encountered during a prior infection or vaccination. After an infection or a vaccination, some of the T-cells that participated in the response remain as memory T-cells, which can rapidly mobilize and clone themselves should the same antigen be re-encountered during a second infection at a later time.
memory T-cell
NCI Metathesaurus: C1017212
Hibiscus chlorotic ringspot virus
James Malone
line
MO_859
obsolete_strain
Jie Zheng
this class was originally 'strain or line'
1.8
A population or type of organisms that is geneticaly different from others of the same species and possessing a set of defined characteristics.
Tomasz Adamusiak
true
consolodated into organism hierarchy
James Malone
polycystic lipomembranous osteodysplasia with sclerosing leukoencephalopathy
Nasu-Hakola disease
OMIMID:221770
NHD
Tomasz Adamusiak
Presenile dementia with bone cyst
PLOSL
antimetabolites
http://www.ebi.ac.uk/efo/EFO_0001834
CHEBI:35221
Substance, structurally similar to a metabolite, which competes with it or replaces it, and so prevents or reduces its normal utilization.
antimetabolite
James Malone
Bursa-Dependent Lymphocytes[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B Lymphocytes
true
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.
obsolete_B-lymphocyte
Bursa-Equivalent Lymphocyte[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B-Lymphocytes[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B Cells[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
CL:0000236
B cell[accessedResource: CL:0000236][accessDate: 10-05-2010]
Bursa-Equivalent Lymphocyte
B lymphocyte[accessedResource: CL:0000236][accessDate: 10-05-2010]
Bursa-Dependent Lymphocytes
B-Cell
NCIt:C12474
B Cells
Consolidated with B cell (EFO_0000101), use B cell class instead.
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.[accessedResource: CL:0000236][accessDate: 10-05-2010]
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.
B lymphocyte
Natriumpyruvat
InChI=1/C3H4O3.Na/c1-2(4)3(5)6;/h1H3,(H,5,6);/q;+1/p-1/fC3H3O3.Na/q-1;m
An organic sodium salt that has formula C3H3NaO3.
InChIKey=DAEPDZWVDSPTHF-UFJSCRFPCI
pyruvic acid, sodium salt
[Na+].CC(=O)C([O-])=O
sodium 2-oxopropanoate
http://www.ebi.ac.uk/efo/EFO_0001612
C3H3NaO3
sodium pyruvate
CHEBI:50144
http://jaxmice.jax.org/strain/000646.html
NIFSTD:birnlex_577
A/J is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/000646.html
A/J
Tomasz Adamusiak
James Malone
reproductive system cell
SW48
James Malone
Ele Holloway
YCC16
James Malone
Ele Holloway
The portion of the body that lies between the thorax and the pelvis.
The portion of the body that lies between the thorax and the pelvis.[accessedResource: NCIt:C12664][accessDate: 04-11-2010]
James Malone
Abdomen[accessedResource: NCIt:C12664][accessDate: 04-11-2010]
Abdomen
abdominal cavity
NCIt:C12664
EB2
James Malone
Ele Holloway
ZFS:0000002
cleavage 2-cell
James Malone
NCIt:C12949
CL:0002371
Somatic Cells[accessedResource: NCIt:C12949][accessDate: 04-11-2010]
BTO:0001268
somatic cell
One of the cells of the body that compose the tissues, organs, and parts of that individual other than the germ cells.
Tomasz Adamusiak
A cell of an organism that does not pass on its genetic material to the organism's offspring (i.e. a non-germ line cell).
One of the cells of the body that compose the tissues, organs, and parts of that individual other than the germ cells.[accessedResource: BTO:0001268][accessDate: 04-11-2010]
James Malone
Somatic Cells
A cell of an organism that does not pass on its genetic material to the organism's offspring (i.e. a non-germ line cell).[accessedResource: CL:0002371][accessDate: 04-11-2010]
well-differentiated sarcoma
James Malone
dorsale Fulcralapophyse
FBbt:00015288
ventrale Fulcralapophyse
chitinous wing
Fulcrum
fulcral cornu[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
oocyte
fulcral cornu
egg
female gamete
TGMA:0000124
ZFA:0009008
The lateral expansion of the posterior part of the cibarium.[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
MA:0000388
egg[accessedResource: ZFA:0009008][accessDate: 04-11-2010]
CL:0000023
oocyte[accessedResource: ZFA:0009008][accessDate: 04-11-2010]
A female germ cell that has entered meiosis.[accessedResource: CL:0000023][accessDate: 04-11-2010]
unfertiized egg
MAT:0000124
The lateral expansion of the posterior part of the cibarium.
Fulcrum[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
cornu
cornua
SAEL:114
lateral flange
lateral flange[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
Tomasz Adamusiak
cornu[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
ventral flange
unfertilized egg
ventral flange[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
A female germ cell that has entered meiosis.
unfertiized egg[accessedResource: MAT:0000124][accessDate: 04-11-2010]
dorsale Fulcralapophyse[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
James Malone
unfertilised egg
cornua[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
chitinous wing[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
female gamete[accessedResource: MAT:0000124][accessDate: 04-11-2010]
ventrale Fulcralapophyse[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
N-1-Naphthalenyl-1,2-ethanediamine dihydrochloride
InChI=1/C12H14N2.2ClH/c13-8-9-14-12-7-3-5-10-4-1-2-6-11(10)12;;/h1-7,14H,8-9,13H2;2*1H/fC12H16N2.2Cl/h13-14H;2*1h/q+2;2*-1
InChIKey=MZNYWPRCVDMOJG-PEHGYZQZCO
N-(1-naphthyl)ethylenediamine dihydrochloride
N-(1-Naphthyl)ethylenediamine.2HCl
N-(1-Napthyl)ethylene diamine HCl
An ethylenediamine dihydrochloride compound having an N-(1-naphthyl) substituent.
CHEBI:53452
C12H16Cl2N2
Marshall's reagent
[Cl-].[Cl-].[NH3+]CC[NH2+]c1cccc2ccccc12
N-(1-Napthyl)ethylene diamine dihydrochloride
Tomasz Adamusiak
N-(1-naphthyl)ethane-1,2-diaminium dichloride
http://www.ebi.ac.uk/efo/EFO_0002736
Ele Holloway
BTO:0000211
Nucleus Caudatus
An elongated gray mass of the neostriatum located adjacent to the lateral ventricle of the brain. (MeSH)
Caudatus[accessedResource: FMAID:61833][accessDate: 04-11-2010]
One of the centrally-located portions of the brain affected by Huntington's Disease. Speech and swallowing problems arise when this region and another region called the putamen are affected.
MA:0000893
NIFSTD:birnlex_1373
FMAID:61833
caudate nucleus
EV:0100185
James Malone
One of the centrally-located portions of the brain affected by Huntington's Disease. Speech and swallowing problems arise when this region and another region called the putamen are affected.[accessedResource: BTO:0000211][accessDate: 04-11-2010]
MAT:0000513
An elongated gray mass of the neostriatum located adjacent to the lateral ventricle of the brain. (MeSH)[accessedResource: NCIt:C12451][accessDate: 04-11-2010]
Tomasz Adamusiak
NCIt:C12451
EMAPA:18207
Caudatus
Nucleus Caudatus[accessedResource: NCIt:C12451][accessDate: 04-11-2010]
Nucleus of brain which is an elongated crescent-shaped mass lying parallel and adjacent to the lateral ventricle throughout its extent.
methylprednisolone
InChIKey=VHRSUDSXCMQTMA-PJHHCJLFBP
CHEBI:6888
metilprednisolona
InChI=1/C22H30O5/c1-12-8-14-15-5-7-22(27,18(26)11-23)21(15,3)10-17(25)19(14)20(2)6-4-13(24)9-16(12)20/h4,6,9,12,14-15,17,19,23,25,27H,5,7-8,10-11H2,1-3H3/t12-,14-,15-,17-,19+,20-,21-,22-/m0/s1
A 6-methylprednisolone that has formula C22H30O5.
1-dehydro-6alpha-methylhydrocortisone
Medrol
http://www.ebi.ac.uk/efo/EFO_0001475
methylprednisolonum
Medrate
6alpha-methylprednisolone
(6alpha,11beta)-11,17,21-trihydroxy-6-methylpregna-1,4-diene-3,20-dione
James Malone
Medrone
6alpha-methyl-11beta,17alpha,21-triol-1,4-pregnadiene-3,20-dione
Urbason
Delta(1)-6alpha-methylhydrocortisone
[H][C@@]12C[C@H](C)C3=CC(=O)C=C[C@]3(C)[C@@]1([H])[C@@H](O)C[C@@]1(C)[C@@]2([H])CC[C@]1(O)C(=O)CO
Solomet
Methylprednisolon
C22H30O5
11beta,17,21-trihydroxy-6alpha-methylpregna-1,4-diene-3,20-dione
http://www.arabidopsis.org/servlets/TairObject?id=1005158840&type=germplasm
CS57816 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158840&type=germplasm
CS57816
James Malone
joint component
James Malone
genetic modification
MO_927
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#genetic_modification[accessedResource: MO_927][accessDate: 04-11-2010]
Examples of genetic modification include specification of a transgene or the gene knocked-out or details of transient transfection
The genetic modification introduced into the organism from which the biomaterial was derived. Examples of genetic modification include specification of a transgene or the gene knocked-out or details of transient transfection.
Tomasz Adamusiak
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#genetic_modification
true
http://www.arabidopsis.org/servlets/TairObject?id=1005158925&type=germplasm
CS57901 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158925&type=germplasm
CS57901
James Malone
TAO:0000151
kidney[accessedResource: TAO:0000151][accessDate: 04-11-2010]
MAT:0000117
EMAPA:16579
The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.Kimmel et al, 1995.
head kidney
1. The primordial kidney; a vestigial excretory structure or its rudiments developing in the embryo at four weeks, before the mesonephros. Although nonfunctional, its duct is later used by the mesonephros, which arises caudal to it.n2. The definitive excretory organ of primitive fishes.
The first kidney is all vertebrates - it is transitional and disappears soon after it has formed.[accessedResource: MAT:0000117][accessDate: 04-11-2010]
The first kidney is all vertebrates - it is transitional and disappears soon after it has formed.
The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.Kimmel et al, 1995.[accessedResource: TAO:0000151][accessDate: 04-11-2010]
EHDAA:1017
pronephron[accessedResource: BTO:0001541][accessDate: 04-11-2010]
MFO:0003340
pronephros
head kidney[accessedResource: BTO:0001541][accessDate: 04-11-2010]
1. The primordial kidney; a vestigial excretory structure or its rudiments developing in the embryo at four weeks, before the mesonephros. Although nonfunctional, its duct is later used by the mesonephros, which arises caudal to it.n2. The definitive excretory organ of primitive fishes.[accessedResource: BTO:0001541][accessDate: 04-11-2010]
embryonic kidney[accessedResource: TAO:0000151][accessDate: 04-11-2010]
kidney
James Malone
ZFA:0000151
pronephron
archinephron[accessedResource: BTO:0001541][accessDate: 04-11-2010]
BTO:0001541
The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.
pronephric nephron[accessedResource: ZFA:0000151][accessDate: 04-11-2010]
XAO:0002000
The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.[accessedResource: ZFA:0000151][accessDate: 04-11-2010]
pronephric nephron
embryonic kidney
archinephron
EV:3000635
Follicular adenoma[accessedResource: SNOMEDCT:55021007][accessDate: 04-11-2010]
Follicular Adenoma of the Thyroid[accessedResource: NCIt:C3684][accessDate: 04-11-2010]
Trabecular Adenoma[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Follicular Adenoma of the Thyroid Gland
GeneRIF:14576819
James Malone
Thyroid follicular adenoma (disorder)[accessedResource: SNOMEDCT:255034006][accessDate: 04-11-2010]
NCIt:C3684
Thyroid Gland Follicular Adenoma
Follicular Adenoma of Thyroid Gland
Microcystic Adenoma
Papillary Adenomas[accessedResource: MSH:D000236][accessDate: 04-11-2010]
SNOMEDCT:255034006
DOID:6204
Adenoma, Papillary
Adenomas, Microcystic
Adenomas, Trabecular
follicular thyroid adenoma
SNOMEDCT:55021007
MSH:D000236
Basal Cell Adenomas[accessedResource: MSH:D000236][accessDate: 04-11-2010]
GeneRIF:15887854
Follicular adenoma (morphologic abnormality)[accessedResource: SNOMEDCT:55021007][accessDate: 04-11-2010]
Trabecular Adenomas[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Follicular Adenoma of Thyroid
Adenoma[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Adenomas[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Monomorphic Adenoma[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Thyroid follicular adenoma (disorder)
Adenomas, Basal Cell
Adenomas, Microcystic[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Follicular Adenoma of Thyroid[accessedResource: NCIt:C3684][accessDate: 04-11-2010]
Follicular Adenoma of Thyroid Gland[accessedResource: NCIt:C3684][accessDate: 04-11-2010]
Monomorphic Adenoma
Adenomas, Monomorphic
Thyroid Gland Follicular Adenoma[accessedResource: NCIt:C3684][accessDate: 04-11-2010]
A benign epithelial tumor with a glandular organization.
Adenoma
Adenomas
Follicular Adenoma of the Thyroid Gland[accessedResource: NCIt:C3684][accessDate: 04-11-2010]
Papillary Adenoma[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Adenomas, Monomorphic[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Follicular Adenoma of the Thyroid
Follicular Adenomas[accessedResource: MSH:D000236][accessDate: 04-11-2010]
A benign epithelial tumor with a glandular organization.[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Adenoma, Microcystic[accessedResource: MSH:D000236][accessDate: 04-11-2010]
GeneRIF:14666683
Papillary Adenomas
Follicular Adenomas
GeneRIF:11994357
follicular adenoma
Basal Cell Adenoma
Adenoma, Basal Cell[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Adenoma, Trabecular
Follicular adenoma (morphologic abnormality)
Autism-Dementia-Ataxia-Loss of Purposeful Hand Use Syndrome[accessedResource: NIFSTD:birnlex_12770][accessDate: 04-11-2010]
GeneRIF:12081725
GeneRIF:15057977
GeneRIF:11768391
Autism-Dementia-Ataxia-Loss of Purposeful Hand Use Syndrome
GeneRIF:12770674
DOID:1206
Rett syndrome
GeneRIF:14751287
Cerebroatrophic Hyperammonemia
GeneRIF:12442230
NIFSTD:birnlex_12770
An inherited neurological developmental disorder that is associated with X-LINKED INHERITANCE and may be lethal in utero to hemizygous males. The affected female is normal until the age of 6-25 months when progressive loss of voluntary control of hand movements and communication skills; ATAXIA; SEIZURES; autistic behavior; intermittent HYPERVENTILATION; and HYPERAMMONEMIA appear. (From Menkes, Textbook of Child Neurology, 5th ed, p199)
GeneRIF:11432961
GeneRIF:16015284
An inherited neurological developmental disorder that is associated with X-LINKED INHERITANCE and may be lethal in utero to hemizygous males. The affected female is normal until the age of 6-25 months when progressive loss of voluntary control of hand movements and communication skills; ATAXIA; SEIZURES; autistic behavior; intermittent HYPERVENTILATION; and HYPERAMMONEMIA appear (MeSH).[accessedResource: NIFSTD:birnlex_12770][accessDate: 04-11-2010]
GeneRIF:12107440
GeneRIF:14974082
James Malone
Rett's Disorder[accessedResource: MSH:D015518][accessDate: 04-11-2010]
A pervasive developmental disorder that is a neurological and developmental disorder that mostly occurs in females and is caused_by a mutation on the MECP2 gene on the X chromosome. Infants with Rett syndrome seem to grow and develop normally at first, but then stop developing and even lose skills and abilities.[accessedResource: DOID:1206][accessDate: 04-11-2010]
Rett disorder
GeneRIF:12160743
GeneRIF:12111643
GeneRIF:12707946
Cerebroatrophic hyperammonaemia[accessedResource: SNOMEDCT:68618008][accessDate: 04-11-2010]
Rett's Syndrome[accessedResource: MSH:D015518][accessDate: 04-11-2010]
GeneRIF:11896459
Rett's Syndrome
RETTS DIS
Rett's disorder (disorder)[accessedResource: DOID:1206][accessDate: 04-11-2010]
SNOMEDCT:68618008
GeneRIF:12449561
Cerebroatrophic hyperammonaemia
An inherited neurological developmental disorder that is associated with X-LINKED INHERITANCE and may be lethal in utero to hemizygous males. The affected female is normal until the age of 6-25 months when progressive loss of voluntary control of hand movements and communication skills; ATAXIA; SEIZURES; autistic behavior; intermittent HYPERVENTILATION; and HYPERAMMONEMIA appear (MeSH).
GeneRIF:14649549
Cerebroatrophic Hyperammonemias[accessedResource: MSH:D015518][accessDate: 04-11-2010]
Cerebroatrophic Hyperammonemias
RTS - Rett syndrome[accessedResource: SNOMEDCT:68618008][accessDate: 04-11-2010]
GeneRIF:16077729
RETT DIS
GeneRIF:15954098
Cerebroatrophic Hyperammonemia[accessedResource: MSH:D015518][accessDate: 04-11-2010]
RETT DIS[accessedResource: MSH:D015518][accessDate: 04-11-2010]
GeneRIF:11955928
GeneRIF:15809268
An inherited neurological developmental disorder that is associated with X-LINKED INHERITANCE and may be lethal in utero to hemizygous males. The affected female is normal until the age of 6-25 months when progressive loss of voluntary control of hand movements and communication skills; ATAXIA; SEIZURES; autistic behavior; intermittent HYPERVENTILATION; and HYPERAMMONEMIA appear. (From Menkes, Textbook of Child Neurology, 5th ed, p199)[accessedResource: MSH:D015518][accessDate: 04-11-2010]
Rett's disorder (disorder)
GeneRIF:12170461
RETTS DIS[accessedResource: MSH:D015518][accessDate: 04-11-2010]
Tomasz Adamusiak
MSH:D015518
A pervasive developmental disorder that is a neurological and developmental disorder that mostly occurs in females and is caused_by a mutation on the MECP2 gene on the X chromosome. Infants with Rett syndrome seem to grow and develop normally at first, but then stop developing and even lose skills and abilities.
Rett's disorder
Rett Disorder[accessedResource: MSH:D015518][accessDate: 04-11-2010]
GeneRIF:16077736
RTS - Rett syndrome
true
James Malone
A picomole is a substance unit equal to 10^-12 mol.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pmol
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pmol[accessedResource: MO_688][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0001798
picomole
Tomasz Adamusiak
MO_688
Jie Zheng
pmol
A substance unit equal to 10^[-12] mol.
diencephalon
The posterior subdivision of the forebrain.[accessedResource: BTO:0000342][accessDate: 04-11-2010]
EMAPA:16896
Interbrain[accessedResource: FMAID:62001][accessDate: 04-11-2010]
James Malone
interbrain
The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis). Kimmel et al, 1995.[accessedResource: TAO:0000101][accessDate: 04-11-2010]
Mature diencephalon[accessedResource: FMAID:62001][accessDate: 04-11-2010]
FMAID:62001
MFO:0002280
Mature diencephalon
The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis).[accessedResource: ZFA:0000101][accessDate: 04-11-2010]
MAT:0000420
Tomasz Adamusiak
betweenbrain
The posterior subdivision of the forebrain.
Organ component of neuraxis that has as its parts the epithalamus, thalamus, hypothalamus, subthalamus. There is only one diencephalon.
The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis). Kimmel et al, 1995.
ZFA:0000101
NIFSTD:birnlex_1503
XAO:0000013
EHDAA:3472
BTO:0000342
Between brain[accessedResource: FMAID:62001][accessDate: 04-11-2010]
TAO:0000101
MA:0000171
The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis).
NIFSTD:birnlex_376
James Malone
A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs. E.g Drosophila melanogaster
organism
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#organism[accessedResource: MO_508][accessDate: 04-11-2010]
A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs.
MO_508
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#organism
Tomasz Adamusiak
Drosophila melanogaster
true
http://www.ebi.ac.uk/efo/EFO_0000634
Jie Zheng
LFD - Low fat diet[accessedResource: SNOMEDCT:16208003][accessDate: 04-11-2010]
Low fat diet, NOS[accessedResource: SNOMEDCT:16208003][accessDate: 04-11-2010]
Low fat diet (finding)
Low fat diet (finding)[accessedResource: SNOMEDCT:16208003][accessDate: 04-11-2010]
Jie Zheng
Diet - low in fat[accessedResource: SNOMEDCT:16208003][accessDate: 04-11-2010]
LF - Low fat diet[accessedResource: SNOMEDCT:16208003][accessDate: 04-11-2010]
low fat diet
Low fat diet, NOS
Tomasz Adamusiak
LF - Low fat diet
LFD - Low fat diet
SNOMEDCT:16208003
Diet - low in fat
ZFS:0000012
blastula high
James Malone
FMA:82493
Bronchial Alveolus
Alveolus
Alveolus[accessedResource: FMA:82493][accessDate: 04-11-2010]
pulmonary alveolus
James Malone
2.6.1
true
obsolete_rectal carcinoma
Use http://www.ebi.ac.uk/efo/EFO_0000365 colorectal adenocarcinoma
MO_734
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hardware_variation_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hardware_variation_design[accessedResource: MO_734][accessDate: 04-11-2010]
hardware variation design
Tomasz Adamusiak
The tissue which binds together and is the support of the various structures of the body. It is made up of fibroblasts, fibroglia, collagen fibrils, and elastic fibrils. It is derived from the mesoderm and in a broad sense includes the collagenous, elastic, mucous, reticular, osseous, and cartilaginous tissue. Some also include the blood in this group of tissues. Connective tissue is classified according to concentration of fibers as loose (areolar) and dense, the latter having more abundant fibers than the former.[accessedResource: BTO:0000421][accessDate: 04-11-2010]
The tissue which binds together and is the support of the various structures of the body. It is made up of fibroblasts, fibroglia, collagen fibrils, and elastic fibrils. It is derived from the mesoderm and in a broad sense includes the collagenous, elastic, mucous, reticular, osseous, and cartilaginous tissue. Some also include the blood in this group of tissues. Connective tissue is classified according to concentration of fibers as loose (areolar) and dense, the latter having more abundant fibers than the former.
muscle attachment cell[accessedResource: CL:0000388][accessDate: 04-11-2010]
tendon
MAT:0000301
tendon[accessedResource: MAT:0000301][accessDate: 04-11-2010]
connective tissue
Tomasz Adamusiak
SAEL:23
fascia
Tissue which consists of fibroblasts, osteocytes or chondrocytes and intercellular matrix produced by these cells. Examples: bone (tissue), dense regular elastic tissue, areolar tissue, neuroglia, adipose tissue.
EV:0100150
tendon cell[accessedResource: MAT:0000301][accessDate: 04-11-2010]
FMAID:9640
James Malone
muscle attachment cell
fascia[accessedResource: MAT:0000301][accessDate: 04-11-2010]
Portion of connective tissue
tendon cell
BTO:0000421
Portion of connective tissue[accessedResource: FMAID:9640][accessDate: 04-11-2010]
XAO:0000173
TAO:0009189
CL:0000388
http://jaxmice.jax.org/strain/009262.html
ILSXISS16/TejJ
Tomasz Adamusiak
2.4
true
obsolete_Arbisopsis thaliana
now using NCI taxon URI:
http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702
James Malone
Jie Zheng
A volume unit which is equal to one millionth of a cubic meter or 10^[-9] m^[3], or to 1 ml.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cc
MO_834
cm^3
cc
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cc[accessedResource: MO_834][accessDate: 04-11-2010]
cubic centimeter
A cubic centimeter is a volume unit which is equal to one millionth of a cubic meter or 10^[-9] m^[3], or to 1 ml.
true
http://www.ebi.ac.uk/efo/EFO_0001714
Bone Marrow
NCIt:C12431
Reticuloendothelial System, Bone Marrow[accessedResource: NCIt:C12431][accessDate: 10-05-2010]
The tissue occupying the spaces of bone. It consists of blood vessel sinuses and a network of hematopoietic cells which give rise to the red cells, white cells, and megakaryocytes.
true
Bone Marrow[accessedResource: NCIt:C12431][accessDate: 10-05-2010]
obsolete_bone marrow
Duplicate term : see bone marrow EFO_0000868
Reticuloendothelial System, Bone Marrow
The tissue occupying the spaces of bone. It consists of blood vessel sinuses and a network of hematopoietic cells which give rise to the red cells, white cells, and megakaryocytes.[accessedResource: NCIt:C12431][accessDate: 10-05-2010]
ischaemia reperfusion injury
ischemia reperfusion injury
A temporal measurement of the period after successful treatment in which there is no appearance of the symptoms or effects of the disease.
disease free survival
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158761&type=germplasm
CS57737 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158761&type=germplasm
CS57737
James Malone
NIFSTD:birnlex_2052
60 seconds duration of centrifugation
A temporal measurement of the time between two specified points.
duration
Tomasz Adamusiak
James Malone
MJ
James Malone
Ele Holloway
Body of Uterus Leiomyoma
GeneRIF:15706419
Fibroleiomyoma[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Uterine Corpus Leiomyoma
Uterine Corpus Leiomyoma[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Leiomyoma, no ICD-O subtype (morphologic abnormality)
Corpus Uteri Fibroid
Leiomyofibroma[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Uterine Fibromas[accessedResource: MSH:D007889][accessDate: 04-11-2010]
Fibroid of Uterine Corpus
Uterine fibroids
GeneRIF:12594000
Uterine leiomyoma NOS (disorder)[accessedResource: SNOMEDCT:189106003][accessDate: 04-11-2010]
Leiomyoma of the Body of Uterus[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Fibroid of Uterine Corpus[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Corpus Uteri Leiomyoma
Leiomyoma of the Corpus Uteri[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
SNOMEDCT:44598004
GeneRIF:12548199
Fibroid of the Uterine Corpus[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Fibroid of Corpus Uteri
Fibromyoma[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Leiomyoma of Uterine Corpus
Fibromyoma
An uncommon benign neoplasm arising from the bone. It is characterized by the presence of spindle-shaped or stellate chondrocytes, a lobulated growth pattern, myxoid stroma formation, and sometimes multinucleated giant cells. It has been associated with chromosomal rearrangement of 6q13 and 6q25 bands. The most common clinical symptom is mild, localized pain.
GeneRIF:11788902
uterine leiomyoma NOS (disorder)
uterine leiomyoma[accessedResource: DOID:13223][accessDate: 04-11-2010]
Fibroid of Corpus Uteri[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
uterine leiomyoma (disorder)[accessedResource: DOID:13223][accessDate: 04-11-2010]
GeneRIF:12634644
Leiomyoma of Uterine Body[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
GeneRIF:12065682
leiomyoma of uterus, unspecified
MSH:D007889
Leiomyomas[accessedResource: MSH:D007889][accessDate: 04-11-2010]
Uterine leiomyoma
A benign tumor derived from smooth muscle tissue, also known as a fibroid tumor. They rarely occur outside of the UTERUS and the GASTROINTESTINAL TRACT but can occur in the SKIN and SUBCUTANEOUS TISSUE, probably arising from the smooth muscle of small blood vessels in these tissues.[accessedResource: MSH:D007889][accessDate: 04-11-2010]
GeneRIF:15769981
Uterine Corpus Leiomyomata[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Myofibroma
Fibroid Tumors
Plexiform leiomyoma[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
GeneRIF:12649198
GeneRIF:15322223
GeneRIF:15572421
Uterine Body Leiomyoma
Fibroid of the Body of Uterus
Fibroid uterus
Fibroids
Leiomyoma, NOS
Body of Uterus Fibroid[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Uterine leiomyoma - fibroids[accessedResource: SNOMEDCT:95315005][accessDate: 04-11-2010]
Leiomyoma of Body of Uterus
GeneRIF:16009172
Leiomyoma of the Uterine Body[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
UTERUS FIBROMA
Body of Uterus Leiomyoma[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
GeneRIF:11756572
GeneRIF:15749523
SNOMEDCT:189106003
GeneRIF:15972578
Uterine leiomyoma, NOS[accessedResource: SNOMEDCT:95315005][accessDate: 04-11-2010]
Leiomyoma of uterus, unspecified[accessedResource: ICD9:218.9][accessDate: 04-11-2010]
GeneRIF:15004438
ICD9:218
GeneRIF:15474102
GeneRIF:15033949
Leiomyoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Leiomyoma, no ICD-O subtype[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
GeneRIF:15231681
GeneRIF:16024248
Fibroma, Uterine
Uterine Body Fibroid
Fibromyomas[accessedResource: MSH:D007889][accessDate: 04-11-2010]
Uterine Fibromas
Tumor, Fibroid
Uterine Corpus Fibroid[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
leiomyoma of Corpus Uteri
GeneRIF:15083381
Leiomyoma of the Body of Uterus
Leiomyoma of the Corpus Uteri
Fibroid of the Corpus Uteri[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
James Malone
Fibroid of the Uterine Corpus
Fibroid
Fibroid of Uterine Body[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
GeneRIF:15334541
Fibroid of Uterine Body
Fibroid of the Uterine Body
uterine fibroid
Uterine Body Leiomyoma[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Myofibroma[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Fibroid of the Uterine Body[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Leiomyoma of Uterine Body
Fibroma, Uterine[accessedResource: MSH:D007889][accessDate: 04-11-2010]
Fibroids[accessedResource: MSH:D007889][accessDate: 04-11-2010]
GeneRIF:14632190
Leiomyoma of the Uterine Corpus
Leiomyoma, NOS[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Body of Uterus Fibroid
Uterine Body Fibroid[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
GeneRIF:12177782
Leiomyomas
Uterine leiomyoma (disorder)
DOID:13223
Leiomyoma, no ICD-O subtype
Leiomyoma[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
GeneRIF:12215337
Leiomyoma of Corpus Uteri[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Fibroleiomyoma
Leiomyoma of the Uterine Body
Lipoleiomyoma[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Uterine fibroids[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Uterine Corpus Leiomyomata
GeneRIF:15536154
GeneRIF:11865300
Fibroid[accessedResource: MSH:D007889][accessDate: 04-11-2010]
UTERINE LEIOMYOMA NOS
GeneRIF:12634633
Uterine Corpus Fibroid
GeneRIF:15604209
ICD9:218.9
Leiomyofibroma
Leiomyoma of the Uterine Corpus[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
A benign smooth muscle neoplasm arising from the body of the uterus. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.
Fibroid of Body of Uterus
A benign smooth muscle neoplasm arising from the body of the uterus. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
GeneRIF:15704521
Leiomyoma of Uterine Corpus[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Fibroid of the Body of Uterus[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Fibroid of the Corpus Uteri
Fibroid uterus[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Fibroid of Body of Uterus[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Tumors, Fibroid[accessedResource: MSH:D007889][accessDate: 04-11-2010]
Lipoleiomyoma
NCIt:C3434
GeneRIF:14698203
SNOMEDCT:95315005
GeneRIF:12766905
Corpus Uteri Leiomyoma[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
GeneRIF:15051039
GeneRIF:14557488
Plexiform leiomyoma
A benign tumor derived from smooth muscle tissue, also known as a fibroid tumor. They rarely occur outside of the UTERUS and the GASTROINTESTINAL TRACT but can occur in the SKIN and SUBCUTANEOUS TISSUE, probably arising from the smooth muscle of small blood vessels in these tissues.
Uterine leiomyoma - fibroids
Leiomyoma of body of uterus[accessedResource: SNOMEDCT:95315005][accessDate: 04-11-2010]
Corpus Uteri Fibroid[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Fibroid Tumor[accessedResource: MSH:D007889][accessDate: 04-11-2010]
UTERUS FIBROMA[accessedResource: DOID:13223][accessDate: 04-11-2010]
Fibromyomas
GeneRIF:12097287
GeneRIF:14995917
Leiomyoma
retinoblastoma
A b117h is an ara c resistant murine leukemia.
B117H
Natural Language Generator 8th April 2010
James Malone
Ele Holloway
true
C
http://www.ebi.ac.uk/efo/EFO_0001700
degree celsius
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#degrees_C[accessedResource: MO_980][accessDate: 04-11-2010]
A temperature derived unit which is equal to one Kelvin degree. However, they have their zeros at different points. The Centigrade scale has its zero at 273.15 K.
degree centigrade
Tomasz Adamusiak
Jie Zheng
MO_980
Degree celsius is a temperature derived unit which is equal to one Kelvin degree. However, they have their zeros at different points. The Centigrade scale has its zero at 273.15 K.
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#degrees_C
ICD9:171.8
Malignant neoplasm of other specified sites of connective and other soft tissue[accessedResource: ICD9:171.8][accessDate: 04-11-2010]
SNOMEDCT:269469005
Malignant neoplasm of connective and other soft tissue (disorder)[accessedResource: SNOMEDCT:187985009][accessDate: 04-11-2010]
MAL NEO SOFT TISSUE ARM
James Malone
Malignant neoplasm of connective and other soft tissue of lower limb, including hip
A malignant mesenchymal neoplasm arising from muscle tissue, adipose tissue, blood vessels, fibrous tissue, or other supportive tissues excluding the bones.[accessedResource: NCIt:C9306][accessDate: 04-11-2010]
Sarcoma, NOS[accessedResource: SNOMEDCT:2424003][accessDate: 04-11-2010]
Malignant neoplasm of connective and other soft tissue of pelvis
Malignant Soft Tissue Tumor
ICD9:171.6
GeneRIF:12435619
connective and soft tissue neoplasm
A malignant mesenchymal neoplasm arising exclusively from the soft tissues. Representative examples include soft tissue sarcoma, extraosseous Ewing sarcoma/peripheral primitive neuroectodermal tumor, and malignant hemangiopericytoma.[accessedResource: NCIt:C4867][accessDate: 04-11-2010]
ICD9:171.7
MAL NEO SOFT TISSUE HEAD
MAL NEO SOFT TISSUE HEAD[accessedResource: ICD9:171.0][accessDate: 04-11-2010]
Sarcoma of the Soft Tissue[accessedResource: NCIt:C9306][accessDate: 04-11-2010]
GeneRIF:12112526
Malignant Neoplasm of the Soft Tissue
GeneRIF:15809709
A malignant mesenchymal neoplasm arising from muscle tissue, adipose tissue, blood vessels, fibrous tissue, or other supportive tissues excluding the bones.
SNOMEDCT:187985009
A usually aggressive malignant mesenchymal cell tumor most commonly arising from muscle, fat, fibrous tissue, bone, cartilage, and blood vessels. Sarcomas occur in both children and adults. The prognosis depends largely on the degree of differentiation (grade) of the tumor. Representative subtypes are liposarcoma, leiomyosarcoma, osteosarcoma, and chondrosarcoma.[accessedResource: NCIt:C9118][accessDate: 04-11-2010]
Malignant neoplasm of connective and other soft tissue of head, face, and neck
GeneRIF:12539045
MAL NEOPL TRUNK NOS[accessedResource: ICD9:171.7][accessDate: 04-11-2010]
Malignant Neoplasm of Soft Tissue
GeneRIF:14507652
Type of cancer of the bone, cartilage, fat, muscle, blood vessels, or other connective or supportive tissue.
MAL NEO SOFT TISSUE LEG[accessedResource: ICD9:171.3][accessDate: 04-11-2010]
GeneRIF:14612455
MAL NEO SOFT TIS THORAX[accessedResource: ICD9:171.4][accessDate: 04-11-2010]
NCIt:C9306
Malignant Tumor of Soft Tissue[accessedResource: NCIt:C4867][accessDate: 04-11-2010]
Connective Tissue Sarcoma
Malignant neoplasm of connective and other soft tissue of thorax
Malignant neoplasm of connective and other soft tissue[accessedResource: ICD9:171][accessDate: 04-11-2010]
Malignant tumour of soft tissue
Malignant neoplasm of connective and other soft tissue of thorax[accessedResource: ICD9:171.4][accessDate: 04-11-2010]
MAL NEO SOFT TIS THORAX
Mesenchymal tumor, malignant
A cancer that affects connective tissue resulting in mesoderm proliferation.
Malignant Tumor of Soft Tissue
Malignant Tumor of the Soft Tissue
Malignant neoplasm of soft tissue (disorder)[accessedResource: SNOMEDCT:269469005][accessDate: 04-11-2010]
Malignant neoplasm of connective and other soft tissue of head, face, and neck[accessedResource: ICD9:171.0][accessDate: 04-11-2010]
Malignant neoplasm of connective and other soft tissue of lower limb, including hip[accessedResource: ICD9:171.3][accessDate: 04-11-2010]
SNOMEDCT:189764008
ICD9:171.0
Connective Tissue Sarcoma[accessedResource: NCIt:C9306][accessDate: 04-11-2010]
Malignant Soft Tissue Tumor[accessedResource: NCIt:C4867][accessDate: 04-11-2010]
GeneRIF:12610779
Sarcoma of Soft Tissue and Bone
DOID:1115
Soft tissue tumour, malignant
ICD9:171.5
Sarcoma of Soft Tissue
Malignant Soft Tissue Neoplasm
MAL NEOPL TRUNK NOS
[M]Sarcoma NOS
Malignant neoplasm of connective and other soft tissue of upper limb, including shoulder
A usually aggressive malignant mesenchymal cell tumor most commonly arising from muscle, fat, fibrous tissue, bone, cartilage, and blood vessels. Sarcomas occur in both children and adults. The prognosis depends largely on the degree of differentiation (grade) of the tumor. Representative subtypes are liposarcoma, leiomyosarcoma, osteosarcoma, and chondrosarcoma.
GeneRIF:16154137
MAL NEO SOFT TISSUE LEG
Sarcoma of the Soft Tissue and Bone
Sarcoma of Soft Tissue[accessedResource: NCIt:C9306][accessDate: 04-11-2010]
Mesenchymal tumour, malignant
MAL NEO SOFT TISSUE NEC[accessedResource: ICD9:171.8][accessDate: 04-11-2010]
Malignant neoplasm of connective and other soft tissue, site unspecified
GeneRIF:15018431
GeneRIF:11953898
Sarcoma of the Soft Tissue and Bone[accessedResource: NCIt:C9118][accessDate: 04-11-2010]
Malignant neoplasm of connective and other soft tissue of abdomen[accessedResource: ICD9:171.5][accessDate: 04-11-2010]
Sarcoma, no ICD-O subtype[accessedResource: SNOMEDCT:2424003][accessDate: 04-11-2010]
Malignant Soft Tissue Neoplasm[accessedResource: NCIt:C4867][accessDate: 04-11-2010]
MAL NEO SOFT TISSUE NOS[accessedResource: ICD9:171.9][accessDate: 04-11-2010]
Soft tissue sarcoma[accessedResource: SNOMEDCT:2424003][accessDate: 04-11-2010]
Malignant neoplasm of connective and other soft tissue of trunk, unspecified
MAL NEO SOFT TISSUE NEC
Malignant neoplasm of other specified sites of connective and other soft tissue
ICD9:171.9
Soft tissue tumour, malignant[accessedResource: SNOMEDCT:2424003][accessDate: 04-11-2010]
Malignant Neoplasm of Soft Tissue[accessedResource: NCIt:C4867][accessDate: 04-11-2010]
[M]Sarcoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189764008][accessDate: 04-11-2010]
GeneRIF:15201968
tumor of soft tissue and skeleton[accessedResource: DOID:1115][accessDate: 04-11-2010]
Sarcoma of Soft Tissue and Bone[accessedResource: NCIt:C9118][accessDate: 04-11-2010]
ICD9:171.2
Malignant neoplasm of connective and other soft tissue of abdomen
ICD9:171
Malignant neoplasm of connective and other soft tissue
connective and soft tissue neoplasm[accessedResource: DOID:1115][accessDate: 04-11-2010]
MAL NEO SOFT TIS ABDOMEN[accessedResource: ICD9:171.5][accessDate: 04-11-2010]
Sarcoma of the Soft Tissue
GeneRIF:15710230
Malignant tumour of soft tissue[accessedResource: SNOMEDCT:269469005][accessDate: 04-11-2010]
MAL NEO SOFT TIS PELVIS
GeneRIF:16327442
Malignant Neoplasm of the Soft Tissue[accessedResource: NCIt:C4867][accessDate: 04-11-2010]
Sarcoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:2424003][accessDate: 04-11-2010]
Malignant neoplasm of soft tissue (disorder)
[M]Sarcoma NOS[accessedResource: SNOMEDCT:189764008][accessDate: 04-11-2010]
GeneRIF:15716602
Malignant neoplasm of connective and other soft tissue of upper limb, including shoulder[accessedResource: ICD9:171.2][accessDate: 04-11-2010]
MAL NEO SOFT TISSUE NOS
Mesenchymal tumour, malignant[accessedResource: SNOMEDCT:2424003][accessDate: 04-11-2010]
[M]Sarcoma NOS (morphologic abnormality)
ICD9:171.4
NCIt:C4867
A cancer that affects connective tissue resulting in mesoderm proliferation.[accessedResource: DOID:1115][accessDate: 04-11-2010]
A malignant mesenchymal neoplasm arising exclusively from the soft tissues. Representative examples include soft tissue sarcoma, extraosseous Ewing sarcoma/peripheral primitive neuroectodermal tumor, and malignant hemangiopericytoma.
Malignant Tumor of the Soft Tissue[accessedResource: NCIt:C4867][accessDate: 04-11-2010]
Soft Tissue Sarcoma
Sarcoma, no ICD-O subtype (morphologic abnormality)
Malignant neoplasm of connective and other soft tissue of trunk, unspecified[accessedResource: ICD9:171.7][accessDate: 04-11-2010]
GeneRIF:14710346
NCIt:C9118
Malignant neoplasm of connective and other soft tissue (disorder)
MAL NEO SOFT TIS PELVIS[accessedResource: ICD9:171.6][accessDate: 04-11-2010]
Sarcoma, NOS
Sarcoma, no ICD-O subtype
Mesenchymal tumor, malignant[accessedResource: SNOMEDCT:2424003][accessDate: 04-11-2010]
MAL NEO SOFT TIS ABDOMEN
Malignant neoplasm of connective and other soft tissue of pelvis[accessedResource: ICD9:171.6][accessDate: 04-11-2010]
tumor of soft tissue and skeleton
SNOMEDCT:2424003
sarcoma
MAL NEO SOFT TISSUE ARM[accessedResource: ICD9:171.2][accessDate: 04-11-2010]
ICD9:171.3
Malignant neoplasm of connective and other soft tissue, site unspecified[accessedResource: ICD9:171.9][accessDate: 04-11-2010]
NCI-H322
James Malone
Ele Holloway
beta-Estradiol
http://www.ebi.ac.uk/efo/EFO_0001468
[H][C@]12CC[C@]3(C)[C@@H](O)CC[C@@]3([H])[C@]1([H])CCc1cc(O)ccc21
Estradiol
The 17beta-isomer of estradiol.
InChI=1/C18H24O2/c1-18-9-8-14-13-5-3-12(19)10-11(13)2-4-15(14)16(18)6-7-17(18)20/h3,5,10,14-17,19-20H,2,4,6-9H2,1H3/t14-,15-,16+,17+,18+/m1/s1
(17beta)-estra-1,3,5(10)-triene-3,17-diol
C18H24O2
17beta-estradiol
An estradiol that has formula C18H24O2.
estra-1,3,5(10)-triene-3,17beta-diol
17beta oestradiol
CHEBI:16469
cis-estradiol
InChIKey=VOXZDWNPVJITMN-ZBRFXRBCBJ
NCIt:C33250
FMA:9610
Faucial tonsil
Faucial tonsil[accessedResource: FMA:9610][accessDate: 04-11-2010]
palatine tonsil
James Malone
An assay where chromatin immunoprecipitation (ChIP) is used in combination with tiling microarray technology
ChIP-chip by tiling array
MT3
Ele Holloway
James Malone
James Malone
EMAPA:18692
MAT:0000121
WBbt:0005777
Organ with organ cavity which connects the cavity of the urinary bladder to the exterior. Examples: There is only one urethra.
The tube through which urine leaves the body. It empties urine from the bladder.
urethra
FMAID:19667
excretory duct
MA:0000379
The tube through which urine leaves the body. It empties urine from the bladder.[accessedResource: BTO:0001426][accessDate: 04-11-2010]
EV:0100099
excretory duct[accessedResource: MAT:0000121][accessDate: 04-11-2010]
XAO:0000153
BTO:0001426
GM12761
James Malone
carcinoma of urinary bladder[accessedResource: DOID:4007][accessDate: 04-11-2010]
GeneRIF:11749692
Bladder carcinoma is a carcinoma arising from the bladder epithelium. Approximately 90% of the bladder carcinomas are transitional cell carcinomas. The remainder are squamous cell carcinomas, adenocarcinomas and small cell neuroendocrine carcinomas.
Cancer of Urinary Bladder
James Malone
GeneRIF:15386310
NCIt:C4912
Bladder Cancer
Urinary Bladder Cancer
Urinary Bladder Carcinoma
GeneRIF:15032076
Urinary Bladder Cancer[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
Cancer of Bladder
A carcinoma arising from the bladder epithelium. Approximately 90% of the bladder carcinomas are transitional cell carcinomas. The remainder are squamous cell carcinomas, adenocarcinomas and small cell neuroendocrine carcinomas.
A carcinoma that arises_from tissues of the bladder.
carcinoma of urinary bladder
Bladder Cancer[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
Carcinoma of the Urinary Bladder[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
GeneRIF:12594814
Carcinoma of the Bladder
Cancer of Bladder[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
GeneRIF:16061860
GeneRIF:15734831
A carcinoma arising from the bladder epithelium. Approximately 90% of the bladder carcinomas are transitional cell carcinomas. The remainder are squamous cell carcinomas, adenocarcinomas and small cell neuroendocrine carcinomas.[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
GeneRIF:15942628
GeneRIF:12492368
Carcinoma of the Bladder[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
A carcinoma that forms in tissues of the bladder.
Carcinoma of bladder[accessedResource: SNOMEDCT:255108000][accessDate: 04-11-2010]
GeneRIF:12820373
Cancer of the Urinary Bladder
Urinary Bladder Carcinoma[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
GeneRIF:15516981
GeneRIF:15140401
Cancer of Urinary Bladder[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
GeneRIF:15599595
carcinoma of bladder
SNOMEDCT:255108000
bladder carcinoma
carcinoma of bladder (disorder)[accessedResource: DOID:4007][accessDate: 04-11-2010]
Cancer of the Bladder
DOID:4007
GeneRIF:16215315
GeneRIF:15361851
A carcinoma that arises_from tissues of the bladder.[accessedResource: DOID:4007][accessDate: 04-11-2010]
GeneRIF:12488298
carcinoma of bladder (disorder)
GeneRIF:12225859
Cancer of the Urinary Bladder[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
Cancer of the Bladder[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
GeneRIF:14654522
Carcinoma of the Urinary Bladder
Manic Disorders[accessedResource: MSH:D001714][accessDate: 04-11-2010]
Manic Bipolar Affective disorder
Manic-Depression
mixed bipolar affective disorder, NOS (disorder)
Bipolar affective disorder , current episode mixed (disorder)
Unspecified bipolar affective disorder, NOS
State, Manic
Affective Bipolar Psychosis[accessedResource: NIFSTD:birnlex_12754][accessDate: 04-11-2010]
GeneRIF:12082561
GeneRIF:15983625
Bipolar affective disorder, manic, unspecified degree[accessedResource: DOID:3312][accessDate: 04-11-2010]
Depressive-manic psych.[accessedResource: DOID:3312][accessDate: 04-11-2010]
GeneRIF:12664313
ICD9:296.80
Manic Depressive disorder[accessedResource: DOID:3312][accessDate: 04-11-2010]
Manic-depressive illness[accessedResource: SNOMEDCT:13746004][accessDate: 04-11-2010]
Manic Depressive disorder
Unspecified bipolar affective disorder, unspecified (disorder)[accessedResource: SNOMEDCT:191647000][accessDate: 04-11-2010]
Manic Bipolar Affective disorder[accessedResource: DOID:3312][accessDate: 04-11-2010]
GeneRIF:14985387
Bipolar disorder (disorder)
GeneRIF:15630410
MANIC DIS[accessedResource: MSH:D001714][accessDate: 04-11-2010]
Unspecified bipolar affective disorder, unspecified
Manic-depressive syndrome NOS[accessedResource: DOID:3312][accessDate: 04-11-2010]
Psychoses, Bipolar Affective
GeneRIF:14699425
GeneRIF:15261714
GeneRIF:15452587
GeneRIF:11702051
GeneRIF:12496953
GeneRIF:14729229
Bipolar Affective Psychosis
States, Manic[accessedResource: MSH:D001714][accessDate: 04-11-2010]
Psychoses, Manic Depressive[accessedResource: MSH:D001714][accessDate: 04-11-2010]
[X]Bipolar affective disorder, unspecified[accessedResource: SNOMEDCT:192365005][accessDate: 04-11-2010]
Tomasz Adamusiak
Depressive-manic psych.
MDI - Manic-depressive illness
MANIC DIS
GeneRIF:14729237
Mania
bipolar disorder manic phase[accessedResource: DOID:3312][accessDate: 04-11-2010]
A major affective disorder marked by severe mood swings (manic or major depressive episodes) and a tendency to remission and recurrence.
DOID:3312
Bipolar affective disorder, current episode depression (disorder)[accessedResource: DOID:3312][accessDate: 04-11-2010]
GeneRIF:15737668
GeneRIF:12097806
GeneRIF:15050861
mixed bipolar I disorder (disorder)
James Malone
GeneRIF:15940297
Manic bipolar I disorder (disorder)[accessedResource: DOID:3312][accessDate: 04-11-2010]
GeneRIF:12232779
GeneRIF:15211633
A major affective disorder marked by severe mood swings (manic or major depressive episodes) and a tendency to remission and recurrence.[accessedResource: MSH:D001714][accessDate: 04-11-2010]
mixed bipolar disorder[accessedResource: DOID:3312][accessDate: 04-11-2010]
Bipolar disorder, unspecified
[X]Bipolar affective disorder, unspecified (disorder)[accessedResource: SNOMEDCT:192365005][accessDate: 04-11-2010]
Manic Disorder
Unspecified bipolar affective disorder, NOS (disorder)
Bipolar Disorders
mixed bipolar affective disorder, NOS (disorder)[accessedResource: DOID:3312][accessDate: 04-11-2010]
GeneRIF:12815743
GeneRIF:14967554
GeneRIF:16168956
GeneRIF:12565915
GeneRIF:15111989
GeneRIF:15799788
BIPOLAR DISORDER NOS
bipolar disorder
Manias[accessedResource: MSH:D001714][accessDate: 04-11-2010]
GeneRIF:15167705
States, Manic
Manic State[accessedResource: MSH:D001714][accessDate: 04-11-2010]
GeneRIF:15576061
SNOMEDCT:192365005
GeneRIF:12555230
Unspecified bipolar affective disorder
MDI - Manic-depressive illness[accessedResource: SNOMEDCT:13746004][accessDate: 04-11-2010]
Unspecified bipolar affective disorder[accessedResource: SNOMEDCT:191646009][accessDate: 04-11-2010]
GeneRIF:12782961
Manic bipolar I disorder (disorder)
Mania[accessedResource: MSH:D001714][accessDate: 04-11-2010]
Bipolar affective disorder , current episode mixed (disorder)[accessedResource: DOID:3312][accessDate: 04-11-2010]
A major affective disorder marked by severe mood swings (manic or major depressive episodes) and a tendency to remission and recurrence (MeSH).[accessedResource: NIFSTD:birnlex_12754][accessDate: 04-11-2010]
NIFSTD:birnlex_12754
Bipolar Depression
GeneRIF:14966479
SNOMEDCT:191646009
GeneRIF:15806582
GeneRIF:16044170
GeneRIF:15838535
Unspecified bipolar affective disorder, unspecified (disorder)
SNOMEDCT:191654006
GeneRIF:15820318
GeneRIF:11840505
Unspecified bipolar affective disorder, NOS (disorder)[accessedResource: SNOMEDCT:191654006][accessDate: 04-11-2010]
GeneRIF:15539862
Manias
GeneRIF:15450783
GeneRIF:12111480
GeneRIF:12610658
Bipolar affective disorder, mixed, unspecified degree
MSH:D001714
Unspecified bipolar affective disorder, NOS[accessedResource: SNOMEDCT:191654006][accessDate: 04-11-2010]
Bipolar disorder, unspecified[accessedResource: ICD9:296.80][accessDate: 04-11-2010]
GeneRIF:15622415
Manic Depressive Psychosis[accessedResource: MSH:D001714][accessDate: 04-11-2010]
GeneRIF:12808434
GeneRIF:14604453
GeneRIF:11930170
Psychoses, Manic-Depressive
mixed bipolar disorder
GeneRIF:15909293
Bipolar disorder (disorder)[accessedResource: SNOMEDCT:13746004][accessDate: 04-11-2010]
GeneRIF:11840509
bipolar disorder manic phase
GeneRIF:16044173
GeneRIF:12951196
Bipolar Disorders[accessedResource: MSH:D001714][accessDate: 04-11-2010]
Manic Depressive Psychosis
GeneRIF:12949534
Manic-depressive syndrome NOS
SNOMEDCT:13746004
[X]Bipolar affective disorder, unspecified
Bipolar Depression[accessedResource: NIFSTD:birnlex_12754][accessDate: 04-11-2010]
GeneRIF:15257153
NCIt:C34423
BIPOLAR DIS[accessedResource: MSH:D001714][accessDate: 04-11-2010]
GeneRIF:12161822
Psychoses, Bipolar Affective[accessedResource: MSH:D001714][accessDate: 04-11-2010]
mixed bipolar I disorder (disorder)[accessedResource: DOID:3312][accessDate: 04-11-2010]
Unspecified bipolar affective disorder (disorder)
GeneRIF:15917720
GeneRIF:14678452
[X]Bipolar affective disorder, unspecified (disorder)
Bipolar affective disorder, mixed, unspecified degree[accessedResource: DOID:3312][accessDate: 04-11-2010]
SNOMEDCT:191647000
Manic-Depression[accessedResource: NCIt:C34423][accessDate: 04-11-2010]
Bipolar affective disorder, unspecified (disorder)[accessedResource: DOID:3312][accessDate: 04-11-2010]
GeneRIF:11901356
GeneRIF:14582141
Bipolar affective disorder, current episode depression (disorder)
GeneRIF:15885920
BIPOLAR DIS
Manic Disorders
GeneRIF:14743183
Bipolar affective disorder, manic, unspecified degree
GeneRIF:12565145
manic disorder[accessedResource: DOID:3312][accessDate: 04-11-2010]
Unspecified bipolar affective disorder, unspecified[accessedResource: SNOMEDCT:191647000][accessDate: 04-11-2010]
GeneRIF:14531760
BIPOLAR DISORDER NOS[accessedResource: ICD9:296.80][accessDate: 04-11-2010]
MANIC DEPRESSIVE ILLNESS
mixed bipolar affective disorder (disorder)
GeneRIF:12647258
GeneRIF:15660667
GeneRIF:12140781
GeneRIF:15824745
A major affective disorder marked by severe mood swings (manic or major depressive episodes) and a tendency to remission and recurrence (MeSH).
GeneRIF:12192619
Bipolar affective disorder[accessedResource: SNOMEDCT:13746004][accessDate: 04-11-2010]
mixed bipolar affective disorder (disorder)[accessedResource: DOID:3312][accessDate: 04-11-2010]
Bipolar affective disorder
GeneRIF:12498692
Nucleus of brain which is located medially to the putamen and laterally to the internal capsule.
pallidum[accessedResource: NIFSTD:birnlex_1234][accessDate: 04-11-2010]
The smaller and more medial part of the lentiform nucleus of the brain, separated from the putamen by the lateral medullary lamina. In official anatomic nomenclature, it is divided by the medial medullary lamina into two parts, lateral and medial, both of which have extensive connections with the corpus striatum, thalamus, and mesencephalon.[accessedResource: BTO:0002246][accessDate: 04-11-2010]
Subcortical nucleus, functionally part of the basal ganglia, which consists of two segments the external (or lateral) and internal (or medial) separated by the medial medullary lamina in primates. In rodents, The globus pallidus lateral is separated from the medial segment by the fibers of the internal capsule/cerebral peduncle.[accessedResource: NIFSTD:birnlex_1234][accessDate: 04-11-2010]
Pale Body[accessedResource: NIFSTD:birnlex_1234][accessDate: 04-11-2010]
BTO:0002246
EV:0100188
The smaller and more medial part of the lentiform nucleus of the brain, separated from the putamen by the lateral medullary lamina. In official anatomic nomenclature, it is divided by the medial medullary lamina into two parts, lateral and medial, both of which have extensive connections with the corpus striatum, thalamus, and mesencephalon.
Subcortical nucleus, functionally part of the basal ganglia, which consists of two segments the external (or lateral) and internal (or medial) separated by the medial medullary lamina in primates. In rodents, The globus pallidus lateral is separated from the medial segment by the fibers of the internal capsule/cerebral peduncle.
FMAID:61835
Pale Body
Paleostriatum
Paleostriatum[accessedResource: FMAID:61835][accessDate: 04-11-2010]
James Malone
pallidum
Tomasz Adamusiak
NIFSTD:birnlex_1234
MA:0000890
MAT:0000510
globus pallidus
obsolete - synonym with experiment type
true
experimental design refers to both observational and experimental (perturbational) studies. The organizing principles of the study including the relationships between assays and the steps taken to interpret the data.
obsolete_experimental design
PC-10
James Malone
Ele Holloway
ArrayExpress production team
Antibody profiling experiment
An assay where proteins in a sample are detected, quantified or otherwise analysed, e.g. antibody profiling
proteomic profiling
James Malone
NCIt:C33064
Medial Collateral Ligament of the Knee[accessedResource: NCIt:C33064][accessDate: 04-11-2010]
medial collateral ligament
James Malone
Medial Collateral Ligament of the Knee
http://www.arabidopsis.org/servlets/TairObject?id=1005158859&type=germplasm
CS57835 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158859&type=germplasm
CS57835
James Malone
http://www.arabidopsis.org/servlets/TairObject?type=germplasm&id=1005152522
CS57521 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=germplasm&id=1005152522
CS57521
James Malone
FMAID:7163
EV:0100152
BTO:0001253
The integument of an animal (as a fur-bearing mammal or a bird) separated from the body usually with its hair or feathers.[accessedResource: BTO:0001253][accessDate: 04-11-2010]
MFO:0003200
The integument of an animal (as a fur-bearing mammal or a bird) separated from the body usually with its hair or feathers.
MAT:0000284
SAEL:95
XAO:0000023
Nonparenchymatous organ that consists of the epidermis, dermis and sets of hair and nails and which surrounds the entire body. Subdivisions of the skin surround various body parts; as a whole, the skin constitutes the external layer of the body. Examples: There is only one skin.
EHDAA:6530
Skin of body
skin
Skin of body[accessedResource: FMAID:7163][accessDate: 04-11-2010]
EMAPA:17525
James Malone
corpus cardiacum
FBbt:00005799
BTO:0000432
James Malone
corpora cardiaca[accessedResource: BTO:0000432][accessDate: 04-11-2010]
A pair of neurohemal organs located on the walls of the aorta just behind the brain. The corpora cardiaca release their store of PTTH only after they receive a signal from neurosecretory cells in the brain.
A pair of neurohemal organs located on the walls of the aorta just behind the brain. The corpora cardiaca release their store of PTTH only after they receive a signal from neurosecretory cells in the brain.[accessedResource: BTO:0000432][accessDate: 04-11-2010]
corpora cardiaca
MO_364
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#control_spike_calibration
A process in which a reporter that could be hybridized to an exogenously added nucleic acid or protein (spike) before or during hybridization is used as a control for data processing.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#control_spike_calibration[accessedResource: MO_364][accessDate: 04-11-2010]
control spike calibration
James Malone
ZFS:0000041
Larval:Days 21-29
Larval:Days 21-29[accessedResource: ZFS:0000041][accessDate: 04-11-2010]
larval day 21-29
James Malone
NIFSTD:birnlex_1031
Multi-tissue structure that is the ventral part of the midbrain and develops from the basal plate. The tegmentum is bordered rostrally by the synencephalon, dorsal thalamus and posterior tuberculum, ventrally by the hypothalamus, and dorsolaterally by the torus semicircularis; caudally the tegmentum is continuous with the medulla oblongata.
mesencephalic tegmentum
tegmentum
MA:0000212
James Malone
Tomasz Adamusiak
ZFA:0001354
TAO:0001354
Multi-tissue structure that is the ventral part of the midbrain and develops from the basal plate. The tegmentum is bordered rostrally by the synencephalon, dorsal thalamus and posterior tuberculum, ventrally by the hypothalamus, and dorsolaterally by the torus semicircularis; caudally the tegmentum is continuous with the medulla oblongata.[accessedResource: ZFA:0001354][accessDate: 04-11-2010]
EMAPA:18215
midbrain tegmentum[accessedResource: ZFA:0001354][accessDate: 04-11-2010]
Subdivision of the midbrain lying anterior to the tectum and posterior to the substantia nigra and cerebral peduncle.
Tegmentum of midbrain
Tegmentum of midbrain[accessedResource: FMAID:62393][accessDate: 04-11-2010]
midbrain tegmentum
mesencephalic tegmentum[accessedResource: ZFA:0001354][accessDate: 04-11-2010]
MAT:0000452
FMAID:62393
A supporting cell projecting inward from the basement membrane of seminiferous tubules. They surround and nourish the developing male germ cells and secrete androgen binding protein. Their tight junctions with the spermatogonia and spermatocytes provide a blood-testis barrier.
Sertoli cell
Tomasz Adamusiak
CL:0000216
A supporting cell projecting inward from the basement membrane of seminiferous tubules. They surround and nourish the developing male germ cells and secrete androgen binding protein. Their tight junctions with the spermatogonia and spermatocytes provide a blood-testis barrier.[accessedResource: CL:0000216][accessDate: 04-11-2010]
FBbt:00000095
A dorsal membrane of the embryo.
A dorsal membrane of the embryo.[accessedResource: FBbt:00000095][accessDate: 04-11-2010]
amnioserosa
James Malone
motor cortex
James Malone
InChIKey=HYIMSNHJOBLJNT-UHFFFAOYAE
COC(=O)C1=C(C)NC(C)=C(C1c1ccccc1[N+]([O-])=O)C(=O)OC
http://www.ebi.ac.uk/efo/EFO_0001578
Nifecard
4-(2'-Nitrophenyl)-2,6-dimethyl-1,4-dihydropyridin-3,5-dicarbonsaeuredimethylester
Nifecor
A dihydropyridine that has formula C17H18N2O6.
Adapine
CHEBI:7565
Procardia
InChI=1/C17H18N2O6/c1-9-13(16(20)24-3)15(14(10(2)18-9)17(21)25-4)11-7-5-6-8-12(11)19(22)23/h5-8,15,18H,1-4H3
C17H18N2O6
nifedipinum
Coracten
dimethyl 2,6-dimethyl-4-(2-nitrophenyl)-1,4-dihydropyridine-3,5-dicarboxylate
nifedipine
nifedipino
Nifedipres
Adalat
DNA/RNA extraction
The procedure used to obtain something from a mixture or compound by chemical or physical or mechanical means, e.g. DNA/RNA extraction
extraction protocol
James Malone
MC116
James Malone
Ele Holloway
NCIt:C32426
decidua basalis
James Malone
http://www.arabidopsis.org/servlets/TairObject?id=1005158895&type=germplasm
CS57871 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158895&type=germplasm
CS57871
James Malone
vegetative apex
James Malone
Ele Holloway
CHEBI:16243
quercetin
InChIKey=REFJWTPEDVJJIY-UHFFFAOYAW
InChI=1/C15H10O7/c16-7-4-10(19)12-11(5-7)22-15(14(21)13(12)20)6-1-2-8(17)9(18)3-6/h1-5,16-19,21H
3,5,7,3',4'-Pentahydroxyflavone
A pentahydroxyflavone having the five hydroxy groups placed at the 3-, 3'-, 4'-, 5- and 7-positions.
C15H10O7
http://www.ebi.ac.uk/efo/EFO_0001600
2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-4H-chromen-4-one
A pentahydroxyflavone that has formula C15H10O7.
Oc1cc(O)c2c(c1)oc(-c1ccc(O)c(O)c1)c(O)c2=O
Parkinson's
Parkinson's[accessedResource: NIFSTD:birnlex_2098][accessDate: 04-11-2010]
Parkinson's disease NOS (disorder)[accessedResource: DOID:14330][accessDate: 04-11-2010]
A neurodegenerative disease that results_from degeneration of the central nervous system that often impairs the sufferer's motor skills, speech, and other functions.
Parkinson's disease NOS[accessedResource: DOID:14330][accessDate: 04-11-2010]
Idiopathic PD
James Malone
Parkinson syndrome
Tomasz Adamusiak
A neurodegenerative disease that results_from degeneration of the central nervous system that often impairs the sufferer's motor skills, speech, and other functions.[accessedResource: DOID:14330][accessDate: 04-11-2010]
Parkinson's syndrome
Parkinson's disease NOS
paralysis agitans[accessedResource: DOID:14330][accessDate: 04-11-2010]
DOID:14330
Parkinson disease[accessedResource: NIFSTD:birnlex_2098][accessDate: 04-11-2010]
Parkinson's disease
Parkinsonian disorder[accessedResource: NIFSTD:birnlex_2098][accessDate: 04-11-2010]
Parkinson's disease (disorder)
Parkinson's disease (disorder)[accessedResource: DOID:14330][accessDate: 04-11-2010]
Parkinson's syndrome[accessedResource: NIFSTD:birnlex_2098][accessDate: 04-11-2010]
Parkinsonian disorder
paralysis agitans
Parkinson's disease NOS (disorder)
Parkinson disease
Ele Holloway
Idiopathic PD[accessedResource: NIFSTD:birnlex_2098][accessDate: 04-11-2010]
NIFSTD:birnlex_2098
Parkinson syndrome[accessedResource: NIFSTD:birnlex_2098][accessDate: 04-11-2010]
CN(C)CCCN1c2ccccc2Sc2ccc(Cl)cc12
3-(2-chlorophenothiazin-10-yl)-N,N-dimethyl-propan-1-amine
A phenothiazine that has formula C17H19ClN2S.
Chlorpromados
InChIKey=ZPEIMTDSQAKGNT-UHFFFAOYAX
Chlorderazin
CHEBI:3647
N-(3-dimethylaminopropyl)-3-chlorophenothiazine
chlorpromazinum
Thorazine
Aminazine
chlorpromazine
clorpromazina
Contomin
Chloropromazine
3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine
A substituted phenothiazine in which the ring nitrogen at position 10 is attached to C-3 of an N,N-dimethylpropanamine moiety.
3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethyl-1-propanamine
http://www.ebi.ac.uk/efo/EFO_0001503
C17H19ClN2S
InChI=1/C17H19ClN2S/c1-19(2)10-5-11-20-14-6-3-4-7-16(14)21-17-9-8-13(18)12-15(17)20/h3-4,6-9,12H,5,10-11H2,1-2H3
CPZ
James Malone
Largactil
HTB-185
D283Med
James Malone
Ele Holloway
Sarcomatoid Renal Cell Carcinoma
Adenocarcinoma of kidney
Grawitz tumour
Hypernephroid Carcinoma
Clear cell carcinoma of kidney (disorder)[accessedResource: DOID:4467][accessDate: 10-05-2010]
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinoma of kidney
Carcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinoma, Renal Cell
Clear Cell Carcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
GeneRIF:15062033
conventional (Clear cell) renal cell carcinoma
DOID:4467
Duct Carcinoma, Collecting (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
conventional (Clear cell) renal cell carcinoma[accessedResource: DOID:4467][accessDate: 10-05-2010]
Sarcomatoid Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Clear Cell Adenocarcinoma, Kidney
Adenocarcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Tumor, Grawitz
Clear Cell Adenocarcinoma of Kidney
Carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Clear cell carcinoma of kidney (disorder)
Carcinomas, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Conventional Renal Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
obsolete_conventional clear cell renal carcinoma
Adenocarcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Clear cell carcinoma of kidney is a renal cell carcinoma described as the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
Hypernephroid Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Papillary Renal Cell Carcinoma
clear cell carcinoma of kidney
GeneRIF:15709172
conventional renal cell carcinoma
Carcinomas, Collecting Duct (Kidney)
Hypernephroma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
GeneRIF:12576453
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
Renal Cell Carcinomas
duplicate of clear cell adenocarcinoma EFO_0000348
Hypernephromas
SNOMEDCT:254915003
Kidney Clear Cell Carcinoma
Hypernephroid Carcinomas
Clear Cell Adenocarcinoma of Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
GeneRIF:14550470
Nephroid Carcinomas
Clear Cell Adenocarcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Carcinoma, Nephroid
Carcinomas, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephroid Carcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinoma, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephromas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.[accessedResource: DOID:4467][accessDate: 10-05-2010]
Kidney Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Conventional (Clear Cell) Renal Cell Adenocarcinoma
Renal Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
MSH:D002292
Collecting Duct Carcinomas (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Hypernephroma
Kidney Clear Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Adenocarcinoma, Renal Cell
true
Clear Cell Renal Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophobe Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.
Grawitz tumour[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Papillary Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Clear Cell Adenocarcinoma
Chromophobe Renal Cell Carcinoma
Clear Cell Renal Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.
1.8
Renal Clear Cell Carcinoma
Carcinoma, Collecting Duct (Kidney)
Renal Cell Adenocarcinomas
NCIt:C4033
Clear Cell Adenocarcinoma of the Kidney
Conventional (Clear Cell) Renal Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
James Malone
Clear cell carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Clear Cell Carcinoma of the Kidney
Grawitz Tumor[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Clear Cell Renal Cell Carcinoma
Renal Cell Adenocarcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
http://www.arabidopsis.org/servlets/TairObject?id=1005158802&type=germplasm
CS57778 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158802&type=germplasm
CS57778
James Malone
C3H10T1/2
James Malone
Ele Holloway
nerve cell[accessedResource: BTO:0000938][accessDate: 04-11-2010]
neuronal cell[accessedResource: BTO:0000938][accessDate: 04-11-2010]
The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.[accessedResource: CL:0000540][accessDate: 04-11-2010]
Tomasz Adamusiak
A grayish or reddish granular cell with specialized processes that is the fundamental functional unit of nervous tissue.
CL:0000540
NIFSTD:sao1417703748
James Malone
BTO:0000938
neuronal cell
The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.
neuron cell[accessedResource: NIFSTD:sao1417703748][accessDate: 04-11-2010]
nerve cell
neuron
A grayish or reddish granular cell with specialized processes that is the fundamental functional unit of nervous tissue.[accessedResource: BTO:0000938][accessDate: 04-11-2010]
neuron cell
The basic cellular units of nervous tissue. Neurons are polarized cells with defined regions consisting of the cell body, an axon, and dendrites, although some types of neurons lack axons or dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.
SK-N-MC
Ele Holloway
James Malone
HB-10
SKNMc
MA:0000154
EV:0100156
hair follicle
James Malone
Ele Holloway
FBbt:00005744
embryonic dorsal epidermis
James Malone
proximal part of limb
The proximal part of the limb (e.g. between shoulder and elbow)
The proximal part of the limb (e.g. between shoulder and elbow)[accessedResource: MAT:0000093][accessDate: 04-11-2010]
proximal part of limb[accessedResource: MAT:0000093][accessDate: 04-11-2010]
MA:0002717
stylopod
James Malone
MAT:0000093
essential tremor
DOID:4990
Essential tremor (finding)
benign essential tremor (disorder) [Ambiguous]
Essential tremor (finding)[accessedResource: DOID:4990][accessDate: 04-11-2010]
benign essential tremor[accessedResource: DOID:4990][accessDate: 04-11-2010]
Tomasz Adamusiak
benign essential tremor (disorder) [Ambiguous][accessedResource: DOID:4990][accessDate: 04-11-2010]
benign essential tremor
MCC:0000107
COLO205
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mating_type_a[accessedResource: MO_659][accessDate: 04-11-2010]
MO_659
a mating type (yeast)
A S. cerevisiae mating type cells that secrete a pheromone that in alpha haploids stimulates processes that lead to mating.[accessedResource: PATO:0001341][accessDate: 04-11-2010]
A S. cerevisiae mating type cells that secrete a pheromone that in alpha haploids stimulates processes that lead to mating.
a mating type (yeast)[accessedResource: PATO:0001341][accessDate: 04-11-2010]
PATO:0001341
mating type a
a[accessedResource: PATO:0001341][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mating_type_a
a
James Malone
NCI-H630
James Malone
Ele Holloway
Organism subdivision which is the part of the body posterior to the vent which includes the anal and caudal fins.
Organism subdivision which is the part of the body posterior to the vent which includes the anal and caudal fins.[accessedResource: ZFA:0001117][accessDate: 04-11-2010]
ZFA:0001117
BTO:0001348
WBbt:0005741
The rear end or a process or prolongation of the rear end of the body of an animal.
post-vent region
The rear end or a process or prolongation of the rear end of the body of an animal.[accessedResource: BTO:0001348][accessDate: 04-11-2010]
tail
post-vent region[accessedResource: ZFA:0001117][accessDate: 04-11-2010]
EMAPA:16748
James Malone
XAO:0003026
MFO:0081020
SAEL:103
MAT:0000094
MA:0000008
Human Immunodeficiency Virus, Type 1
NCIt:C14220
Human Immunodeficiency Virus, Type 1[accessedResource: NCIt:C14220][accessDate: 04-11-2010]
HIV-1 seropositive
James Malone
The type species of lentivirus and the etiologic agent of acquired immunodeficiency syndrome (AIDS). It is characterized by its cytopathic effect and affinity for the T4-lymphocyte.[accessedResource: NCIt:C14220][accessDate: 04-11-2010]
Human Immunodeficiency Virus 1[accessedResource: NCIt:C14220][accessDate: 04-11-2010]
The type species of lentivirus and the etiologic agent of acquired immunodeficiency syndrome (AIDS). It is characterized by its cytopathic effect and affinity for the T4-lymphocyte.
Human Immunodeficiency Virus 1
HIV-1
GM12006
James Malone
true
A race is a popluation categorized on the basis of various sets of heritable characteristics.
An arbitrary classification of a taxonomic group that is a division of a species. It usually arises as a consequence of geographical isolation within a species and is characterized by shared heredity, physical attributes and behavior, and in the case of humans, by common history, nationality, or geographic distribution.[accessedResource: NCIt:C17049][accessDate: 03-11-2010]
2.6.1
NCIt:C17049
Racial Group
obsolete_race
Racial Group[accessedResource: NCIt:C17049][accessDate: 03-11-2010]
use EFO_0001799 instead
James Malone
An arbitrary classification of a taxonomic group that is a division of a species. It usually arises as a consequence of geographical isolation within a species and is characterized by shared heredity, physical attributes and behavior, and in the case of humans, by common history, nationality, or geographic distribution.
internal ear
auris interna[accessedResource: BTO:0000630][accessDate: 04-11-2010]
inner ear
internal ear[accessedResource: BTO:0000630][accessDate: 04-11-2010]
MIAA:0000145
The essential organ of hearing and equilibrium that is located in the temporal bone, is innervated by the auditory nerve, and includes the vestibule, the semicircular canals, and the cochlea.
James Malone
auris interna
The essential organ of hearing and equilibrium that is located in the temporal bone, is innervated by the auditory nerve, and includes the vestibule, the semicircular canals, and the cochlea.[accessedResource: BTO:0000630][accessDate: 04-11-2010]
inner ear structure
inner ear[accessedResource: BTO:0000630][accessDate: 04-11-2010]
BTO:0000630
true
http://www.ebi.ac.uk/efo/EFO_0001807
A volume per unit volume unit which is equal to one millionth of a liter of solute in one liter of solution.
James Malone
ml/l
milliliter per liter
A milliliter per liter is a unit of concentrationdefined as a volume per unit volume unit which is equal to one millionth of a liter of solute in one liter of solution.
UO:0000207
SNOMEDCT:128098009
Scott syndrome (disorder)
Scott syndrome (disorder)[accessedResource: SNOMEDCT:128098009][accessDate: 04-11-2010]
Scott syndrome
James Malone
VH-64
James Malone
Ele Holloway
N231
James Malone
Ele Holloway
PO:0020094
mature oocyte
ovum[accessedResource: MAT:0000213][accessDate: 04-11-2010]
mature oocyte[accessedResource: CL:0000025][accessDate: 04-11-2010]
OntologyMappingImporter following MAT:0000213
plant egg
James Malone
egg
egg[accessedResource: CL:0000025][accessDate: 04-11-2010]
Tomasz Adamusiak
ovum
A female gamete where meiosis has progressed to metaphase II and is able to participate in fertilization.
MAT:0000213
CL:0000025
A female gamete where meiosis has progressed to metaphase II and is able to participate in fertilization.[accessedResource: CL:0000025][accessDate: 04-11-2010]
MFO:0002860
MA:0000216
spinal cord
XAO:0000020
EV:0100316
EMAPA:17577
TAO:0000075
FMAID:7647
spinal cord structure[accessedResource: ZFA:0000075][accessDate: 04-11-2010]
MAT:0000183
SAEL:100
spinal cord structure
The cord of nervous tissue that extends from the brain lengthwise along the back in the vertebral canal, gives off the pairs of spinal nerves, carries impulses to and from the brain, and serves as a center for initiating and coordinating many reflex acts.[accessedResource: BTO:0001279][accessDate: 04-11-2010]
James Malone
Segment of neuraxis that has as its parts gray matter and white matter that surround the central canal. Examples: There is only one spinal cord.
BTO:0001279
ZFA:0000075
EHDAA:2863
The cord of nervous tissue that extends from the brain lengthwise along the back in the vertebral canal, gives off the pairs of spinal nerves, carries impulses to and from the brain, and serves as a center for initiating and coordinating many reflex acts.
EB3
James Malone
Ele Holloway
B117P
James Malone
Ele Holloway
NCIt:C53654
A disease of the heart muscle or myocardium proper whose cause is unknown.
A disease of the heart muscle or myocardium proper whose cause is unknown.[accessedResource: NCIt:C53654][accessDate: 04-11-2010]
idiopathic cardiomyopathy
James Malone
GeneRIF:15001561
GeneRIF:15867174
GeneRIF:15601946
GeneRIF:12849738
GeneRIF:16155108
Ischaemia[accessedResource: SNOMEDCT:52674009][accessDate: 04-11-2010]
GeneRIF:15078802
GeneRIF:15147523
GeneRIF:16194580
GeneRIF:15059967
GeneRIF:12232802
GeneRIF:14615282
GeneRIF:15734859
GeneRIF:12975460
GeneRIF:12736150
GeneRIF:15512786
GeneRIF:12651615
GeneRIF:12883833
Ischaemia, NOS
GeneRIF:11801667
GeneRIF:16052682
Ischemia (disorder)
GeneRIF:12904478
GeneRIF:14747752
GeneRIF:12947324
GeneRIF:15306252
GeneRIF:14583338
GeneRIF:15050129
GeneRIF:12538716
GeneRIF:12969257
GeneRIF:12130736
GeneRIF:12368657
GeneRIF:15502938
GeneRIF:14965033
GeneRIF:15489954
GeneRIF:12598725
GeneRIF:15262323
GeneRIF:15030400
GeneRIF:16040592
GeneRIF:11919511
GeneRIF:15241185
GeneRIF:12454802
GeneRIF:15309411
GeneRIF:12963035
GeneRIF:12453540
GeneRIF:14578604
GeneRIF:12718435
GeneRIF:15612529
GeneRIF:12699784
GeneRIF:11822892
GeneRIF:12707035
GeneRIF:15239105
GeneRIF:12716944
GeneRIF:16284105
GeneRIF:12598732
GeneRIF:12535945
GeneRIF:14500739
Ischemia (disorder)[accessedResource: DOID:326][accessDate: 04-11-2010]
GeneRIF:14568904
GeneRIF:15316398
GeneRIF:12468103
GeneRIF:12709584
GeneRIF:12384456
GeneRIF:12623065
GeneRIF:12076861
GeneRIF:15017017
GeneRIF:12172377
GeneRIF:15851594
GeneRIF:12165407
GeneRIF:12144846
GeneRIF:15729291
GeneRIF:12577622
GeneRIF:12871572
GeneRIF:15961228
GeneRIF:15575898
James Malone
GeneRIF:15345651
GeneRIF:12714332
GeneRIF:15791006
GeneRIF:12145195
GeneRIF:12031986
GeneRIF:11877468
GeneRIF:15653094
ischemia
GeneRIF:15358666
GeneRIF:15362036
GeneRIF:15723986
GeneRIF:12812761
GeneRIF:15350969
GeneRIF:16077081
GeneRIF:15380477
GeneRIF:12923494
GeneRIF:14507649
GeneRIF:15856211
GeneRIF:15013953
GeneRIF:16055264
GeneRIF:11837786
GeneRIF:15339931
GeneRIF:12813366
DOID:326
GeneRIF:14670843
GeneRIF:15081307
GeneRIF:14741413
GeneRIF:14753415
GeneRIF:12529269
GeneRIF:14983226
GeneRIF:15817274
GeneRIF:15207275
GeneRIF:12210757
GeneRIF:15854743
Ischemia, NOS
GeneRIF:12414116
GeneRIF:11854323
GeneRIF:15262832
GeneRIF:15117851
GeneRIF:12950452
Ischaemia
GeneRIF:12805025
GeneRIF:12730952
GeneRIF:12672549
GeneRIF:15613744
GeneRIF:15994441
GeneRIF:12540780
GeneRIF:12753927
GeneRIF:15742404
GeneRIF:15284219
GeneRIF:15543936
GeneRIF:16115445
GeneRIF:12782295
GeneRIF:16095866
GeneRIF:12437588
GeneRIF:15829914
GeneRIF:15181368
GeneRIF:12489796
GeneRIF:14643014
GeneRIF:15142843
GeneRIF:12415119
GeneRIF:12078512
GeneRIF:15025939
GeneRIF:15309413
Ischemias
GeneRIF:16166266
GeneRIF:12595498
GeneRIF:16100246
Ischemias[accessedResource: MSH:D007511][accessDate: 04-11-2010]
GeneRIF:12746188
GeneRIF:15561908
GeneRIF:11756680
GeneRIF:15541008
GeneRIF:12600263
GeneRIF:12208351
GeneRIF:15474357
GeneRIF:15611365
GeneRIF:15637314
GeneRIF:12031847
A hypoperfusion of the BLOOD through an organ or tissue caused by a PATHOLOGIC CONSTRICTION or obstruction of its BLOOD VESSELS, or an absence of BLOOD CIRCULATION.[accessedResource: MSH:D007511][accessDate: 04-11-2010]
GeneRIF:15837573
GeneRIF:11934832
GeneRIF:14969349
GeneRIF:11945023
GeneRIF:15518712
A hypoperfusion of the BLOOD through an organ or tissue caused by a PATHOLOGIC CONSTRICTION or obstruction of its BLOOD VESSELS, or an absence of BLOOD CIRCULATION.
GeneRIF:15778274
GeneRIF:16127466
GeneRIF:14730711
SNOMEDCT:52674009
GeneRIF:12580450
GeneRIF:15173034
GeneRIF:12593860
GeneRIF:14757696
GeneRIF:14983993
GeneRIF:14502288
GeneRIF:12126535
Ischemia, NOS[accessedResource: SNOMEDCT:52674009][accessDate: 04-11-2010]
GeneRIF:12207967
GeneRIF:12201360
GeneRIF:12645009
GeneRIF:15105298
GeneRIF:15953587
GeneRIF:12528815
GeneRIF:12088756
GeneRIF:15206826
GeneRIF:15804717
GeneRIF:15901600
GeneRIF:14871559
GeneRIF:15548426
GeneRIF:15820254
GeneRIF:12860919
GeneRIF:15818741
GeneRIF:14522822
GeneRIF:15845077
GeneRIF:15579510
GeneRIF:12897086
GeneRIF:12352321
Ischaemia, NOS[accessedResource: SNOMEDCT:52674009][accessDate: 04-11-2010]
GeneRIF:15687494
GeneRIF:15358037
GeneRIF:12657670
GeneRIF:15790561
GeneRIF:15752542
GeneRIF:14732352
GeneRIF:15316036
GeneRIF:12099359
GeneRIF:12766162
MSH:D007511
GeneRIF:15090052
GeneRIF:12490603
GeneRIF:12887688
GeneRIF:15223375
GeneRIF:14599979
NCIt:C4250
A locally aggressive malignant neoplasm composed of mature adipocytes showing cell size variation and nuclear atypia. It is often associated with the presence of hyperchromatic multinucleated stromal cells, and varying numbers of lipoblasts. There are three histologic subtypes, sclerosing, inflammatory, and spindle cell liposarcoma. These tumors do not usually metastasize unless they undergo dedifferentiation.
A locally aggressive malignant neoplasm composed of mature adipocytes showing cell size variation and nuclear atypia. It is often associated with the presence of hyperchromatic multinucleated stromal cells, and varying numbers of lipoblasts. There are three histologic subtypes, sclerosing, inflammatory, and spindle cell liposarcoma. These tumors do not usually metastasize unless they undergo dedifferentiation.[accessedResource: NCIt:C4250][accessDate: 04-11-2010]
well-differentiated liposarcoma
Tomasz Adamusiak
James Malone
TAO:0000632
reproductive system[accessedResource: FBbt:00004857][accessDate: 04-11-2010]
EHDAA:5923
reproductive system - animals
EMAPA:17381
reproductive system
genital system
FMAID:7160
FBbt:00004857
XAO:0000142
reproductive system - animals[accessedResource: MAT:0000305][accessDate: 04-11-2010]
animal reproductive system
SAEL:89
genital system[accessedResource: MAT:0000305][accessDate: 04-11-2010]
EV:0100100
James Malone
MAT:0000305
Jie Zheng
nanomole
James Malone
true
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#nmol[accessedResource: MO_743][accessDate: 04-11-2010]
A nanomole is a substance unit equal to one thousandth of one millionth of a mole or 10^-9 mol.
MO_743
http://www.ebi.ac.uk/efo/EFO_0001800
Tomasz Adamusiak
nmol
A substance unit equal to one thousandth of one millionth of a mole or 10^[-9] mol.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#nmol
MCC:0000430
SK-N-SH
SKNSH
Tomasz Adamusiak
A property of a cell which is able to differentiate into into one or more differentiated cell types
pluripotent
GeneRIF:15026168
GeneRIF:12368187
GeneRIF:15813938
GeneRIF:15954227
GeneRIF:12232784
GeneRIF:14646594
GeneRIF:15212839
Alzheimer Disease, Early Onset
GeneRIF:12497622
GeneRIF:12497631
GeneRIF:15024728
Alzheimer Type Senile Dementia[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:15337312
GeneRIF:15530656
GeneRIF:15152345
Alzheimer Disease, Late Onset
GeneRIF:14657172
GeneRIF:12142731
GeneRIF:12600718
AD - Alzheimer's disease[accessedResource: SNOMEDCT:26929004][accessDate: 04-11-2010]
GeneRIF:16106215
DOID:10652
GeneRIF:15451372
GeneRIF:12604387
GeneRIF:12112088
GeneRIF:12600716
GeneRIF:14651959
GeneRIF:12600202
GeneRIF:15635706
Alzheimer's disease
GeneRIF:15708435
GeneRIF:14572447
GeneRIF:14999081
GeneRIF:12732730
A degenerative disease of the BRAIN characterized by the insidious onset of DEMENTIA. Impairment of MEMORY, judgment, attention span, and problem solving skills are followed by severe APRAXIAS and a global loss of cognitive abilities. The condition primarily occurs after age 60, and is marked pathologically by severe cortical atrophy and the triad of SENILE PLAQUES; NEUROFIBRILLARY TANGLES; and NEUROPIL THREADS. (From Adams et al., Principles of Neurology, 6th ed, pp1049-57)
GeneRIF:15899246
Dementia, Senile[accessedResource: MSH:D000544][accessDate: 04-11-2010]
Alzheimers Dementia[accessedResource: DOID:10652][accessDate: 04-11-2010]
GeneRIF:15555766
GeneRIF:15106838
GeneRIF:11771745
GeneRIF:15665036
GeneRIF:12160938
GeneRIF:12480753
GeneRIF:15464268
GeneRIF:15082170
GeneRIF:12528817
GeneRIF:12074831
GeneRIF:16082716
[X]Dementia in Alzheimer's disease (disorder)[accessedResource: SNOMEDCT:192160005][accessDate: 04-11-2010]
Dementia, Presenile[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:15263903
GeneRIF:15181247
GeneRIF:15147516
GeneRIF:16130099
AD
Alzheimer Senile Dementia
GeneRIF:12566926
LATE ONSET ALZHEIMER DIS
GeneRIF:12928051
GeneRIF:11848684
NCIt:C38778
GeneRIF:15255951
GeneRIF:14523627
GeneRIF:11852060
Alzheimers Dementia
GeneRIF:12614671
GeneRIF:12480756
GeneRIF:16258844
GeneRIF:15356202
GeneRIF:16179263
GeneRIF:16226260
GeneRIF:15452311
GeneRIF:12270958
NIFSTD:birnlex_2092
SNOMEDCT:192160005
Alzheimer Disease
GeneRIF:15728175
GeneRIF:16174740
GeneRIF:11798857
GeneRIF:12770689
GeneRIF:12116197
Alzheimers
Alzheimer's Dementia[accessedResource: NIFSTD:birnlex_2092][accessDate: 04-11-2010]
GeneRIF:15111312
GeneRIF:14519527
GeneRIF:12435432
GeneRIF:15182943
GeneRIF:15172102
Dementias, Senile[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:15210531
GeneRIF:15722183
GeneRIF:12826738
GeneRIF:11927360
James Malone
GeneRIF:12925530
Alzheimers disease[accessedResource: NIFSTD:birnlex_2092][accessDate: 04-11-2010]
Alzheimer disease[accessedResource: SNOMEDCT:26929004][accessDate: 04-11-2010]
GeneRIF:15716413
GeneRIF:12565129
GeneRIF:15175114
GeneRIF:12200623
[X]Dementia in Alzheimer's disease, unspecified[accessedResource: SNOMEDCT:192164001][accessDate: 04-11-2010]
GeneRIF:15557325
GeneRIF:11771751
GeneRIF:16079207
GeneRIF:15358178
GeneRIF:15014128
A progressive, neurodegenerative disease characterized by loss of function and death of nerve cells in several areas of the brain leading to loss of cognitive function such as memory and language.[accessedResource: NCIt:C2866][accessDate: 04-11-2010]
Alzheimer Senile Dementia[accessedResource: NIFSTD:birnlex_2092][accessDate: 04-11-2010]
SNOMEDCT:26929004
Dementia in Alzheimer's disease (disorder)
GeneRIF:15060098
GeneRIF:12505619
GeneRIF:15115757
GeneRIF:12888622
GeneRIF:14746899
GeneRIF:12192622
GeneRIF:12445809
GeneRIF:12509811
GeneRIF:14717705
Focal Onset Alzheimer's Disease[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:12242547
GeneRIF:15823754
GeneRIF:12815750
GeneRIF:12876480
FOCAL ONSET ALZHEIMERS DIS
GeneRIF:15193763
NCIt:C2866
Dementia, Presenile Alzheimer[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:11826038
GeneRIF:15953364
GeneRIF:15893372
GeneRIF:14688411
GeneRIF:15546861
GeneRIF:15917098
FOCAL ONSET ALZHEIMERS DIS[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:15956169
Alzheimers disease
GeneRIF:16101387
GeneRIF:12626500
GeneRIF:12928512
Alzheimer Type Dementia[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:12408226
GeneRIF:12200143
Alzheimer Type Senile Dementia
GeneRIF:12009501
GeneRIF:15070964
GeneRIF:15781969
GeneRIF:16098202
GeneRIF:14637088
GeneRIF:12098640
GeneRIF:12080182
GeneRIF:16102903
GeneRIF:15759131
GeneRIF:12759460
Senile Dementias
Dementia in Alzheimer's disease, unspecified (disorder)
GeneRIF:15732116
GeneRIF:11837744
GeneRIF:15708437
GeneRIF:9701251
GeneRIF:12873803
GeneRIF:12417381
GeneRIF:15452128
GeneRIF:11992568
GeneRIF:12527400
GeneRIF:15068254
GeneRIF:14978286
GeneRIF:12650976
GeneRIF:15770150
GeneRIF:15365176
GeneRIF:12070657
ALZHEIMER DIS
GeneRIF:15601849
GeneRIF:14739533
Alzheimer's Dementia
GeneRIF:15034766
GeneRIF:12882323
GeneRIF:12972157
[X]Dementia in Alzheimer's disease
GeneRIF:12928053
GeneRIF:15192701
GeneRIF:15737439
GeneRIF:14625044
GeneRIF:14722078
GeneRIF:15453269
GeneRIF:11831556
Alzheimer's disease (disorder)[accessedResource: SNOMEDCT:26929004][accessDate: 04-11-2010]
GeneRIF:12824768
Alzheimer's Disease Pathway[accessedResource: NCIt:C38778][accessDate: 04-11-2010]
GeneRIF:12149413
GeneRIF:12895443
GeneRIF:15048650
GeneRIF:14739536
GeneRIF:11940690
DAT - Dementia Alzheimer's type
GeneRIF:12111440
GeneRIF:12809550
SNOMEDCT:192164001
GeneRIF:15776278
GeneRIF:11971084
GeneRIF:12107813
Tomasz Adamusiak
GeneRIF:16150694
GeneRIF:15375590
GeneRIF:12641733
Dementia of the Alzheimer's type
GeneRIF:15050722
GeneRIF:15355315
GeneRIF:12707938
GeneRIF:15456940
GeneRIF:12177374
GeneRIF:12127670
EARLY ONSET ALZHEIMER DIS
GeneRIF:15106853
GeneRIF:14521990
GeneRIF:12459318
GeneRIF:11771749
GeneRIF:12614934
GeneRIF:15211644
GeneRIF:12770691
GeneRIF:12111806
GeneRIF:15975076
Acute Confusional Senile Dementia
GeneRIF:15094456
GeneRIF:15621017
GeneRIF:12508915
Focal Onset Alzheimer's Disease
GeneRIF:12112084
GeneRIF:12387451
GeneRIF:14663182
GeneRIF:11939591
GeneRIF:12876460
GeneRIF:11847218
GeneRIF:15178951
GeneRIF:15313836
Dementia, Primary Senile Degenerative
GeneRIF:12133495
GeneRIF:15059642
GeneRIF:12600719
GeneRIF:14701757
Dementia in Alzheimer's disease
A degenerative disease of the BRAIN characterized by the insidious onset of DEMENTIA. Impairment of MEMORY, judgment, attention span, and problem solving skills are followed by severe APRAXIAS and a global loss of cognitive abilities. The condition primarily occurs after age 60, and is marked pathologically by severe cortical atrophy and the triad of SENILE PLAQUES; NEUROFIBRILLARY TANGLES; and NEUROPIL THREADS. (From Adams et al., Principles of Neurology, 6th ed, pp1049-57)[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:12117364
GeneRIF:12707937
ALZHEIMER DIS[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:12480749
GeneRIF:12960780
EARLY ONSET ALZHEIMER DIS[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:15509549
GeneRIF:15184629
MSH:D000544
GeneRIF:14985339
GeneRIF:15236409
GeneRIF:12787059
ALZHEIMERS DIS
GeneRIF:12499843
GeneRIF:15465084
GeneRIF:15068244
ALZHEIMER DIS LATE ONSET[accessedResource: MSH:D000544][accessDate: 04-11-2010]
Alzheimer Dementia
GeneRIF:12796468
GeneRIF:12645087
GeneRIF:16111477
GeneRIF:12417379
Presenile Dementias
GeneRIF:11841602
GeneRIF:12891359
Alzheimer's disease, NOS
GeneRIF:11552008
GeneRIF:15837559
GeneRIF:16116430
GeneRIF:12535780
GeneRIF:15610181
GeneRIF:12460603
GeneRIF:15082191
GeneRIF:12175481
GeneRIF:12032152
Early Onset Alzheimer Disease[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:15931081
GeneRIF:15255950
GeneRIF:15882808
GeneRIF:15203119
GeneRIF:14739535
GeneRIF:15944016
GeneRIF:16002400
Presenile Dementia
GeneRIF:14661818
GeneRIF:15075440
GeneRIF:16116115
[X]Dementia in Alzheimer's disease[accessedResource: SNOMEDCT:192160005][accessDate: 04-11-2010]
AD[accessedResource: DOID:10652][accessDate: 04-11-2010]
GeneRIF:11936240
GeneRIF:14991845
Late Onset Alzheimer Disease[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:15026113
Senile Dementia
GeneRIF:12151789
GeneRIF:12499840
GeneRIF:15567486
GeneRIF:12605101
Senile Dementia, Acute Confusional[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:12499050
GeneRIF:15034937
GeneRIF:14757935
GeneRIF:11756426
Alzheimer's disease, NOS[accessedResource: SNOMEDCT:26929004][accessDate: 04-11-2010]
GeneRIF:16098915
GeneRIF:13678670
GeneRIF:15228592
GeneRIF:12483461
GeneRIF:12742739
GeneRIF:15056725
GeneRIF:15167696
GeneRIF:15123740
GeneRIF:15207261
Dementia, Primary Senile Degenerative[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:12565837
GeneRIF:12459519
GeneRIF:12401548
A dementia which is an incurable disease of unknown cause, starting in late middle age or in old age, that results in progressive memory loss, impaired thinking, disorientation, and changes in personality and mood, that leads in advanced cases to a profound decline in cognitive and physical functioning, and that is marked histologically by the degeneration of brain neurons especially in the cerebral cortex and by the presence of neurofibrillary tangles and plaques containing beta-amyloid.
GeneRIF:12969266
Alzheimer's disease (disorder)
Presenile Alzheimer Dementia
GeneRIF:12109594
GeneRIF:15699049
GeneRIF:12740599
GeneRIF:16023140
GeneRIF:16286548
GeneRIF:12702875
GeneRIF:11840502
AD - Alzheimer's disease
Alzheimer's Disease Pathway
GeneRIF:15338333
GeneRIF:15084795
GeneRIF:12226093
GeneRIF:11849768
GeneRIF:14708344
GeneRIF:12876265
GeneRIF:15016430
GeneRIF:12697290
GeneRIF:12025816
GeneRIF:12707936
Dementia in Alzheimer's disease (disorder)[accessedResource: DOID:10652][accessDate: 04-11-2010]
GeneRIF:15485486
GeneRIF:12531514
GeneRIF:15193429
GeneRIF:15745979
GeneRIF:15024730
GeneRIF:14614898
GeneRIF:12727335
GeneRIF:14515137
GeneRIF:12807433
GeneRIF:12514700
GeneRIF:15277615
GeneRIF:11927634
GeneRIF:15364413
GeneRIF:15860461
GeneRIF:12939405
GeneRIF:15068237
GeneRIF:12023056
GeneRIF:15313842
GeneRIF:15053964
GeneRIF:12555245
GeneRIF:15087549
GeneRIF:11905990
GeneRIF:15967987
GeneRIF:15331147
GeneRIF:16027741
GeneRIF:11278808
GeneRIF:12551918
GeneRIF:15577914
Dementia in Alzheimer's disease[accessedResource: SNOMEDCT:192160005][accessDate: 04-11-2010]
GeneRIF:12807963
Dementia of the Alzheimer's type[accessedResource: DOID:10652][accessDate: 04-11-2010]
GeneRIF:11837743
GeneRIF:15860464
GeneRIF:12422374
Alzheimer's[accessedResource: NIFSTD:birnlex_2092][accessDate: 04-11-2010]
GeneRIF:12147333
GeneRIF:12438920
GeneRIF:12509807
Alzheimer Dementia[accessedResource: NIFSTD:birnlex_2092][accessDate: 04-11-2010]
GeneRIF:14991457
GeneRIF:16000144
GeneRIF:15091317
GeneRIF:15155565
GeneRIF:15585340
GeneRIF:11771746
GeneRIF:14519529
GeneRIF:12145324
A progressive, neurodegenerative disease characterized by loss of function and death of nerve cells in several areas of the brain leading to loss of cognitive function such as memory and language.
GeneRIF:12362316
ICD9:331.0
GeneRIF:15804423
[X]Dementia in Alzheimer's disease, unspecified (disorder)[accessedResource: SNOMEDCT:192164001][accessDate: 04-11-2010]
GeneRIF:12627474
GeneRIF:15144856
GeneRIF:12218659
GeneRIF:11592857
GeneRIF:11831025
GeneRIF:12692477
GeneRIF:16181410
Dementia, Alzheimer Type
GeneRIF:12694406
GeneRIF:15370375
GeneRIF:14675603
GeneRIF:14639046
GeneRIF:12928052
GeneRIF:12816543
GeneRIF:12893422
ALZHEIMERS DIS[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:12489797
GeneRIF:15596614
GeneRIF:15342129
[X]Dementia in Alzheimer's disease, unspecified
GeneRIF:12084708
GeneRIF:15755860
GeneRIF:16231093
GeneRIF:11920850
GeneRIF:14523088
GeneRIF:12914969
GeneRIF:15106847
GeneRIF:12408231
Presenile Dementias[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:12068009
GeneRIF:15802910
[X]Dementia in Alzheimer's disease, unspecified (disorder)
Dementia in Alzheimer's disease, unspecified (disorder)[accessedResource: DOID:10652][accessDate: 04-11-2010]
GeneRIF:12221172
[X]Dementia in Alzheimer's disease (disorder)
GeneRIF:15030408
GeneRIF:11897170
GeneRIF:12890766
GeneRIF:14761950
GeneRIF:15804918
GeneRIF:12859671
GeneRIF:12609057
GeneRIF:15013567
A dementia which is an incurable disease of unknown cause, starting in late middle age or in old age, that results in progressive memory loss, impaired thinking, disorientation, and changes in personality and mood, that leads in advanced cases to a profound decline in cognitive and physical functioning, and that is marked histologically by the degeneration of brain neurons especially in the cerebral cortex and by the presence of neurofibrillary tangles and plaques containing beta-amyloid.[accessedResource: DOID:10652][accessDate: 04-11-2010]
GeneRIF:15975077
GeneRIF:15522224
GeneRIF:12824062
GeneRIF:14765129
GeneRIF:12223024
GeneRIF:12486154
DAT - Dementia Alzheimer's type[accessedResource: SNOMEDCT:192160005][accessDate: 04-11-2010]
HCC366
James Malone
http://www.ebi.ac.uk/efo/EFO_0001466
C15H10Cl2N2O2
lonidamine
lonidaminum
diclondazolic acid
InChIKey=WDRYRZXSPDWGEB-UYBDAZJACL
Lonidamin
Doridamina
InChI=1/C15H10Cl2N2O2/c16-10-6-5-9(12(17)7-10)8-19-13-4-2-1-3-11(13)14(18-19)15(20)21/h1-7H,8H2,(H,20,21)/f/h20H
CHEBI:50138
1-(2,4-dichlorobenzyl)-1H-indazole-3-carboxylic acid
DICA
1-(2,4-dichlorbenzyl)-indazole-3-carboxylic acid
lonidamina
OC(=O)c1nn(Cc2ccc(Cl)cc2Cl)c2ccccc12
An indazole that has formula C15H10Cl2N2O2.
Hodgkin's disease of lymph nodes of inguinal region and/or lower limb (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease, unspecified type, involving lymph nodes of multiple sites[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease, unspecified type, involving intrapelvic lymph nodes[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's Disease
stage II Subdiaphragmatic Hodgkin Lymphoma[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's Lymphomas[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's disease of lymph nodes of multiple sites (disorder)
Hodgkin's disease NOS (disorder)
GeneRIF:15638381
Hodgkin's disease NOS of lymph nodes of multiple sites (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease of lymph nodes of axilla and/or upper limb (disorder)
Diseases, Hodgkins[accessedResource: MSH:D006689][accessDate: 04-11-2010]
stage I Subdiaphragmatic Hodgkin Lymphoma[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease, unspecified type, unspecified site, extranodal and solid organ sites[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease of lymph nodes of head, face and/or neck (disorder)
GeneRIF:11855781
Hodgkin's disease, unspecified type, involving lymph nodes of axilla and upper limb
Hodgkin disease[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS of intrathoracic lymph nodes (disorder)
GeneRIF:15912144
HODGKIN DIS[accessedResource: MSH:D006689][accessDate: 04-11-2010]
GeneRIF:12478664
GeneRIF:12609061
GeneRIF:12969974
lymphogranulomatosis[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:12152987
Hodgkin's disease NOS (& [lymphogranuloma malignant])[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's Granuloma[accessedResource: MSH:D006689][accessDate: 04-11-2010]
GeneRIF:12091121
Hodgkin's disease NOS, unspecified site (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
DOID:8567
Hodgkin's disease, unspecified type, unspecified site, extranodal and solid organ sites
ICD9:201
Hodgkin's disease, unspecified type, involving intrathoracic lymph nodes[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's sarcoma NOS (disorder)
Hodgkin's disease, unspecified type, involving lymph nodes of axilla and upper limb[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:16108827
Hodgkin's disease, unspecified type, involving intra-abdominal lymph nodes
Hodgkin's disease NOS of lymph nodes of multiple sites (disorder)
Lymphogranuloma, Malignant
GeneRIF:15526025
Lymphoma, Hodgkin's[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's disease NOS (morphologic abnormality)
ICD9:201.9
GeneRIF:12389614
Hodgkin's sarcoma (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Disease, Hodgkin
GeneRIF:12456498
GeneRIF:12011765
Splenic Hodgkins Lymphoma
Hodgkin's disease, unspecified type
GeneRIF:11839577
Lymphogranuloma, malignant (morphologic abnormality)
GeneRIF:14654080
Hodgkin's disease, unspecified type, involving intra-abdominal lymph nodes[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:15933052
Hodgkins lymphoma
Disease, Hodgkin's[accessedResource: MSH:D006689][accessDate: 04-11-2010]
GeneRIF:12875982
Hodgkin's disease, unspecified type, involving lymph nodes of head, face, and neck
Hodgkin's disease NOS of spleen (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
A malignant disease characterized by progressive enlargement of the lymph nodes, spleen, and general lymphoid tissue. In the classical variant, giant usually multinucleate Hodgkin's and REED-STERNBERG CELLS are present; in the nodular lymphocyte predominant variant, lymphocytic and histiocytic cells are seen.
Malignant Granulomas[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's Lymphomas
Hodgkin's disease of lymph nodes of head, face AND/OR neck (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:11956621
Hodgkin's sarcoma of unspecified site (disorder)
Hodgkin sarcoma [obs]
Hodgkin's disease, unspecified type, involving spleen
GeneRIF:12824192
Hodgkin's lymphoma NOS
GeneRIF:12070005
GeneRIF:15585627
GeneRIF:15551733
HL[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:14645011
GeneRIF:14961078
Hodgkin Lymphoma[accessedResource: MSH:D006689][accessDate: 04-11-2010]
GeneRIF:16123212
GeneRIF:14959851
Hodgkin's disease NOS of lymph nodes of head, face and neck (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS (morphologic abnormality)[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:12389626
GeneRIF:11830502
Hodgkin's disease NOS of lymph nodes of head, face and neck (disorder)
Hodgkin sarcoma [obs][accessedResource: DOID:8567][accessDate: 04-11-2010]
MSH:D006689
GeneRIF:15105810
Hodgkin's disease, unspecified type, involving lymph nodes of head, face and neck[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's Lymphoma stage III
Granuloma, Hodgkin
Hodgkin's disease NOS of lymph nodes of inguinal region and lower limb (disorder)
Hodgkin's disease NOS of intra-abdominal lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:15712176
Hodgkin's disease NOS of intrapelvic lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:11929801
Hodgkins Diseases
Hodgkin's disease NOS of lymph nodes of axilla and upper limb (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease of intra-abdominal lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
lymphogranulomatosis
GeneRIF:14959852
Malignant Granuloma[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's sarcoma (disorder)
Hodgkin's disease NOS of lymph nodes of axilla and upper limb (disorder)
Hodgkin's disease of intrapelvic lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS of intrathoracic lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Malignant Lymphogranuloma[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's disease of intrathoracic lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:11986952
Hodgkin lymphoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:11839668
GeneRIF:12594824
Hodgkin's disease, unspecified type, involving intrapelvic lymph nodes
Hodgkin's disease of spleen (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease of lymph nodes of multiple sites (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Malignant Granulomas
stage I Subdiaphragmatic Hodgkin Lymphoma
Hodgkin Lymphoma
Hodgkin's disease of lymph nodes of axilla AND/OR upper limb (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease, unspecified type[accessedResource: ICD9:201.9][accessDate: 04-11-2010]
HODGKINS DIS[accessedResource: MSH:D006689][accessDate: 04-11-2010]
GeneRIF:12145210
GeneRIF:12038453
Hodgkin's disease, unspecified type, involving lymph nodes of multiple sites
Hodgkin's disease (disorder)
Hodgkin's disease, unspecified type, involving intrathoracic lymph nodes
Hodgkin's disease of spleen (disorder)
HODGKIN DIS
GeneRIF:15291355
HL
Hodgkin's disease, unspecified type, involving spleen[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS of intra-abdominal lymph nodes (disorder)
GeneRIF:12429802
Granuloma, Hodgkin[accessedResource: MSH:D006689][accessDate: 04-11-2010]
A malignant disease characterized by progressive enlargement of the lymph nodes, spleen, and general lymphoid tissue. In the classical variant, giant usually multinucleate Hodgkin's and REED-STERNBERG CELLS are present; in the nodular lymphocyte predominant variant, lymphocytic and histiocytic cells are seen.[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's disease of lymph nodes of inguinal region AND/OR lower limb (disorder)
Hodgkin's disease of intra-abdominal lymph nodes (disorder)
GeneRIF:12174874
Hodgkin's disease NOS of lymph nodes of inguinal region and lower limb (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Granuloma, Hodgkin's
GeneRIF:12393409
GeneRIF:15120936
Hodgkin's disease of intrathoracic lymph nodes (disorder)
Hodgkin's disease NOS
Hodgkin's disease NOS of intrapelvic lymph nodes (disorder)
Hodgkin's lymphoma
Hodgkin lymphoma, no ICD-O subtype (morphologic abnormality)
Hodgkin's lymphoma NOS[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's sarcoma[accessedResource: ICD9:201.2][accessDate: 04-11-2010]
Hodgkin's disease, unspecified type, involving lymph nodes of inguinal region and lower limb
GeneRIF:14962256
Hodgkin's sarcoma
HODGKINS DIS
Granuloma, Malignant
GeneRIF:12431239
GeneRIF:15772702
Hodgkin's disease, unspecified type, involving lymph nodes of inguinal region and lower limb[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's Lymphoma stage III[accessedResource: DOID:8567][accessDate: 04-11-2010]
stage II Subdiaphragmatic Hodgkin Lymphoma
Lymphogranuloma, malignant (morphologic abnormality)[accessedResource: DOID:8567][accessDate: 04-11-2010]
James Malone
GeneRIF:15026356
GeneRIF:15556690
Hodgkin's disease NOS (& [lymphogranuloma malignant])
ICD9:201.2
GeneRIF:15796964
Malignant Lymphogranulomas[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's disease (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS[accessedResource: DOID:8567][accessDate: 04-11-2010]
Malignant Lymphogranulomas
Hodgkin's disease of intrapelvic lymph nodes (disorder)
Hodgkin's sarcoma NOS (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS, unspecified site (disorder)
Splenic Hodgkins Lymphoma[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's sarcoma of unspecified site (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS of spleen (disorder)
rat cell line
An assay in which an array is used detect polymorphisms in DNA samples
genotyping by array
MAT:0000349
BTO:0000537
A sweet liquid that is secreted by the nectaries of a plant and is the chief raw material of honey.
A sweet liquid that is secreted by the nectaries of a plant and is the chief raw material of honey.[accessedResource: BTO:0000537][accessDate: 04-11-2010]
nectar
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#clinical_treatment
MO_384
The current clinical treatment(s) of the patient from which the biosource is derived. E.g. radiotherapy
Jie Zheng
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#clinical_treatment[accessedResource: MO_384][accessDate: 04-11-2010]
radiotherapy
clinical treatment
James Malone
Spondylarthrosis NOS
Heterogeneous group of arthritic diseases sharing clinical and radiologic features. They are associated with the HLA-B27 ANTIGEN and some with a triggering infection. Most involve the axial joints in the SPINE, particularly the SACROILIAC JOINT, but can also involve asymmetric peripheral joints. Subsets include ANKYLOSING SPONDYLITIS; REACTIVE ARTHRITIS; PSORIATIC ARTHRITIS; and others.
Spondylosis[accessedResource: SNOMEDCT:8847002][accessDate: 04-11-2010]
Spondylosis (disorder)
JOINT DIS NOS-OTH JT[accessedResource: ICD9:719.98][accessDate: 04-11-2010]
SNOMEDCT:372109003
SPONDYLOS NOS W/O MYELOP
Unspecified joint disorder of other specified sites[accessedResource: ICD9:719.98][accessDate: 04-11-2010]
Spondylarthrosis[accessedResource: SNOMEDCT:8847002][accessDate: 04-11-2010]
Disorder of joint of spine (disorder)[accessedResource: SNOMEDCT:372109003][accessDate: 04-11-2010]
Spondarthropathy[accessedResource: DOID:1123][accessDate: 04-11-2010]
Disorder of joint of spine
Spondyloarthropathy (disorder)[accessedResource: SNOMEDCT:372109003][accessDate: 04-11-2010]
OA - Osteoarthritis of spine[accessedResource: SNOMEDCT:8847002][accessDate: 04-11-2010]
Spondylosis of unspecified site without mention of myelopathy
Spondyloarthropathy (disorder)
GeneRIF:14558097
Spondylarthropathies[accessedResource: MSH:D025242][accessDate: 04-11-2010]
spondyloarthropathy
Spondylosis, NOS
Spondylarthrosis
ICD9:719.98
Spondylarthropathy[accessedResource: MSH:D025242][accessDate: 04-11-2010]
OA - Osteoarthritis of the spine
ICD9:721.90
Spondylarthropathy
Disorder of joint of spine (disorder)
Disorder of joint of spine[accessedResource: SNOMEDCT:372109003][accessDate: 04-11-2010]
Spondylosis of unspecified site without mention of myelopathy[accessedResource: ICD9:721.90][accessDate: 04-11-2010]
Osteoarthritis of spine
Unspecified joint disorder of other specified sites
JOINT DIS NOS-OTH JT
Spondylosis
OA - Osteoarthritis of the spine[accessedResource: SNOMEDCT:8847002][accessDate: 04-11-2010]
MSH:D025242
Spondylosis, NOS[accessedResource: SNOMEDCT:8847002][accessDate: 04-11-2010]
Spondylarthropathies
Spondylosis (disorder)[accessedResource: SNOMEDCT:8847002][accessDate: 04-11-2010]
GeneRIF:12115249
SNOMEDCT:8847002
James Malone
Spondarthropathy
GeneRIF:15146432
SPONDYLOS NOS W/O MYELOP[accessedResource: ICD9:721.90][accessDate: 04-11-2010]
Spondylarthrosis, NOS[accessedResource: SNOMEDCT:8847002][accessDate: 04-11-2010]
Heterogeneous group of arthritic diseases sharing clinical and radiologic features. They are associated with the HLA-B27 ANTIGEN and some with a triggering infection. Most involve the axial joints in the SPINE, particularly the SACROILIAC JOINT, but can also involve asymmetric peripheral joints. Subsets include ANKYLOSING SPONDYLITIS; REACTIVE ARTHRITIS; PSORIATIC ARTHRITIS; and others.[accessedResource: MSH:D025242][accessDate: 04-11-2010]
DOID:1123
OA - Osteoarthritis of spine
Osteoarthritis of spine[accessedResource: SNOMEDCT:8847002][accessDate: 04-11-2010]
http://www.arabidopsis.org/servlets/TairObject?id=1005158920&type=germplasm
CS57896 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158920&type=germplasm
CS57896
James Malone
GM07345
James Malone
[X]Unspecified malaria (disorder)
GeneRIF:15691125
GeneRIF:15272009
malaria
Malarial fever[accessedResource: SNOMEDCT:248437004][accessDate: 04-11-2010]
A protozoan infection caused by the genus Plasmodium. There are four species of Plasmodium that can infect humans: Plasmodium falciparum, vivax, ovale, and malariae. It is transmitted to humans by infected mosquitoes. Signs and symptoms include paroxysmal high fever, sweating, chills, and anemia.[accessedResource: NCIt:C34797][accessDate: 04-11-2010]
Disease due to Plasmodiidae[accessedResource: SNOMEDCT:105649009][accessDate: 04-11-2010]
Malarial fever (finding)[accessedResource: SNOMEDCT:248437004][accessDate: 04-11-2010]
SNOMEDCT:105649009
GeneRIF:12626578
GeneRIF:15322007
Disease due to Plasmodiidae
SNOMEDCT:186797008
Other malaria
MALARIA COMPLICATED NEC[accessedResource: ICD9:084.9][accessDate: 04-11-2010]
[X]Unspecified malaria[accessedResource: SNOMEDCT:187510004][accessDate: 04-11-2010]
GeneRIF:15931230
GeneRIF:15724813
Malaria (disorder)
Unspecified malaria (disorder)[accessedResource: SNOMEDCT:186797008][accessDate: 04-11-2010]
Other malaria (disorder)
GeneRIF:14694201
Other pernicious complications of malaria
MALARIA NEC
MALARIA NOS
GeneRIF:11668637
GeneRIF:12140747
Malarial fever (finding)
GeneRIF:12125143
GeneRIF:12738632
GeneRIF:15634900
GeneRIF:12654089
Induced malaria (disorder)
SNOMEDCT:61462000
Other pernicious complications of malaria[accessedResource: ICD9:084.9][accessDate: 04-11-2010]
Unspecified malaria (disorder)
GeneRIF:15086902
GeneRIF:14595440
GeneRIF:12574396
MALARIA COMPLICATED NEC
ICD9:084.9
GeneRIF:15845528
induced malaria
An Aconoidasida infectious disease characterized as a vector-borne infectious disease caused by the presence of protozoan parasites of the genus Plasmodium in the red blood cells, transmitted from an infected to an uninfected individual by the bite of anopheline mosquitoes, and characterized by periodic attacks of chills and fever that coincide with mass destruction of blood cells and the release of toxic substances by the parasite at the end of each reproductive cycle.[accessedResource: DOID:12365][accessDate: 04-11-2010]
SNOMEDCT:266121001
GeneRIF:12117997
GeneRIF:15718915
MALARIA NEC[accessedResource: ICD9:084.4][accessDate: 04-11-2010]
SNOMEDCT:187510004
Disease due to Plasmodiidae (disorder)
Induced malaria (disorder)[accessedResource: DOID:12365][accessDate: 04-11-2010]
Disease due to Plasmodiidae (disorder)[accessedResource: SNOMEDCT:105649009][accessDate: 04-11-2010]
SNOMEDCT:248437004
Other malaria (disorder)[accessedResource: SNOMEDCT:266121001][accessDate: 04-11-2010]
Malaria (disorder)[accessedResource: SNOMEDCT:61462000][accessDate: 04-11-2010]
Malaria, NOS[accessedResource: SNOMEDCT:61462000][accessDate: 04-11-2010]
induced malaria[accessedResource: DOID:12365][accessDate: 04-11-2010]
GeneRIF:14695625
GeneRIF:12933825
GeneRIF:15853902
An Aconoidasida infectious disease characterized as a vector-borne infectious disease caused by the presence of protozoan parasites of the genus Plasmodium in the red blood cells, transmitted from an infected to an uninfected individual by the bite of anopheline mosquitoes, and characterized by periodic attacks of chills and fever that coincide with mass destruction of blood cells and the release of toxic substances by the parasite at the end of each reproductive cycle.
GeneRIF:14767829
Other malaria[accessedResource: SNOMEDCT:266121001][accessDate: 04-11-2010]
GeneRIF:12746397
GeneRIF:15478802
[X]Unspecified malaria (disorder)[accessedResource: SNOMEDCT:187510004][accessDate: 04-11-2010]
[X]Unspecified malaria
GeneRIF:15319871
Malarial fever
GeneRIF:12486610
GeneRIF:15500919
James Malone
GeneRIF:11434773
Malaria is a parasitic disease characterized as a vector-borne arthropod infectious acute or chronic disease caused by the presence of sporozoan parasites of the genus Plasmodium in the red blood cells, transmitted from an infected to an uninfected individual by the bite of anopheline mosquitoes, and characterized by periodic attacks of chills and fever that coincide with mass destruction of blood cells and the release of toxic substances by the parasite at the end of each reproductive cycle. Occurrance is widespread in tropical and subtropical regions, including parts of the Americas, Asia, and Africa.
NCIt:C34797
GeneRIF:11971017
GeneRIF:16113307
ICD9:084
DOID:12365
GeneRIF:15933743
Malaria, unspecified[accessedResource: ICD9:084.6][accessDate: 04-11-2010]
Plasmodiosis
GeneRIF:12654091
GeneRIF:15383590
ICD9:084.4
GeneRIF:12402212
ICD9:084.6
GeneRIF:15973412
GeneRIF:12496175
A protozoan infection caused by the genus Plasmodium. There are four species of Plasmodium that can infect humans: Plasmodium falciparum, vivax, ovale, and malariae. It is transmitted to humans by infected mosquitoes. Signs and symptoms include paroxysmal high fever, sweating, chills, and anemia.
Paludism[accessedResource: SNOMEDCT:61462000][accessDate: 04-11-2010]
Plasmodiosis[accessedResource: SNOMEDCT:61462000][accessDate: 04-11-2010]
Unspecified malaria
GeneRIF:15211007
Paludism
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Microgram_per_Kilogram_per_Day
ug per kg per day
microgram per kilogram per day
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#age
3 days post planting
James Malone
A temporal measurement of the time period elapsed since an identifiable point in the life cycle of an organism. If a developmental stage is specified, the identifiable point would be the beginning of that stage. Otherwise the identifiable point must be specified such as planting (e.g. 3 days post planting).
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#age[accessedResource: MO_467][accessDate: 04-11-2010]
Tomasz Adamusiak
age
MO_467
SW1783
James Malone
Ele Holloway
Genetic traits are small inherited parts of the phenotype of an organism
genetic trait
James Malone
http://jaxmice.jax.org/strain/009272.html
ILSXISS51/TejJ
Tomasz Adamusiak
fungicides
http://www.ebi.ac.uk/efo/EFO_0001823
CHEBI:24127
A substance used to destroy fungal pests.
fungicide
James Malone
600MPE
James Malone
M
molar
http://www.ebi.ac.uk/efo/EFO_0001805
Tomasz Adamusiak
MO_936
A molar is a unit of molarity which expresses a concentration of 1 mole of solute per liter of solution (mol/L).
A unit of concentration which expresses a concentration of 1 mole of solute per liter of solution (mol/L).
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#M
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#M[accessedResource: MO_936][accessDate: 04-11-2010]
true
D4
D4 glioblastoma derived primary cell line
James Malone
Ele Holloway
FMAID:6964
ciliary ganglion
Tomasz Adamusiak
Jie Zheng
COX-1 inhibitor
http://www.ebi.ac.uk/efo/EFO_0001891
CHEBI:50630
A cyclooxygenase inhibitor with specificity for cyclooxygenase 1.
cyclooxygenase 1 inhibitor
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#virus
MO_372
http://www.ebi.ac.uk/efo/EFO_0001450
James Malone
Tomasz Adamusiak
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#virus[accessedResource: MO_372][accessDate: 04-11-2010]
Virus
hepatic schizont
IDOMAL:0000322
hepatic schizont stage
Tomasz Adamusiak
A schizont produced in the liver of the vertebrate host.
hepatic schizont stage[accessedResource: IDOMAL:0000322][accessDate: 04-11-2010]
A schizont produced in the liver of the vertebrate host.[accessedResource: IDOMAL:0000322][accessDate: 04-11-2010]
Jie Zheng
1.6
true
MA:0000869
obsolete_lateral geniculate nucleus
James Malone
Duplication: use class EFO_0001988
http://www.ebi.ac.uk/efo/location_of
location_of
http://www.ebi.ac.uk/efo/is_realized_by
Relation between a realizable entity and a process. Reciprocal relation of realizes
is_realized_by
has_disease_location
http://www.ebi.ac.uk/efo/realizes
Relation between a process and a material fulfilling a role (i.e. realizing a role within the context of the process). For example a human realizing role of teacher within a lesson teching process.
realizes
http://www.ebi.ac.uk/efo/is_input_of
is_input_of
http://www.ebi.ac.uk/efo/contains
contains
is_unit_of
http://www.ebi.ac.uk/efo/located_in
located_in
Has_participant is a primitive instance-level relation between a process, a continuant, and a time at which the A continuant participates in some way in the process. The relation obtains, for example, when this particular process of oxygen exchange across this particular alveolar membrane has_participant this particular sample of hemoglobin at this particular time.
has_participant
Participates in is a primitive instance-level relation between a continuant and a process in which it participates. For example a scanner participates in a scanning process at some specific time.
participates_in
http://www.ebi.ac.uk/efo/has_input
has_input
http://www.ebi.ac.uk/efo/contained_in
Containment obtains in each case between material and immaterial continuants, for instance: lung contained_in thoracic cavity; bladder contained_in pelvic cavity. Hence containment is not a transitive relation. If c part_of c1 at t then we have also, by our definition and by the axioms of mereology applied to spatial regions, c located_in c1 at t. Thus, many examples of instance-level location relations for continuants are in fact cases of instance-level parthood. For material continuants location and parthood coincide. Containment is location not involving parthood, and arises only where some immaterial continuant is involved. To understand this relation, we first define overlap for continuants as follows: c1 overlap c2 at t =def for some c, c part_of c1 at t and c part_of c2 at t.
contained_in
relationship
is_location_of_disease
EFO_0000823
http://www.ebi.ac.uk/efo/has_part
has_part
http://www.ebi.ac.uk/efo/derived_into
derived_into
has_unit
EFO_0000822
http://www.ebi.ac.uk/efo/part_of
For continuants: C part_of C' if and only if: given any c that instantiates C at a time t, there is some c' such that c' instantiates C' at time t, and c *part_of* c' at t. For processes: P part_of P' if and only if: given any p that instantiates P at a time t, there is some p' such that p' instantiates P' at time t, and p *part_of* p' at t. (Here *part_of* is the instance-level part-relation.)
part_of
http://www.ebi.ac.uk/efo/derives_from
Derivation as a relation between instances. The temporal relation of derivation is more complex. Transformation, on the instance level, is just the relation of identity: each adult is identical to some child existing at some earlier time. Derivation on the instance-level is a relation holding between non-identicals. More precisely, it holds between distinct material continuants when one succeeds the other across a temporal divide in such a way that at least a biologically significant portion of the matter of the earlier continuant is inherited by the later. Thus we will have axioms to the effect that from c derives_from c1 we can infer that c and c1 are not identical and that there is some instant of time t such that c1 exists only prior to and c only subsequent to t. We will also be able to infer that the spatial region occupied by c as it begins to exist at t overlaps with the spatial region occupied by c1 as it ceases to exist in the same instant.
derives_from
http://www.ebi.ac.uk/efo/EFO_0000829
inheres_in
http://www.ebi.ac.uk/efo/is_role_of
role_of
http://www.ebi.ac.uk/efo/has_role
A relation between a continuant C and a role R. The reciprocal relation of role_of.
has_role
http://www.ebi.ac.uk/efo/has_quality
has_quality
http://www.ebi.ac.uk/efo/EFO_0001377
A relation between an entity and a dependent continuant; the reciprocal relation of inheres_in [GOC:cjm] example of usage: red eye bearer_of redness
bearer_of
ENCODE website <http://www.genome.gov/10005107>
ENCODE, full name the Encyclopedia Of DNA Elements, is a public research consortium which has the aim of identifying all functional elements in the human genome sequence.
ENCODE
James Malone