Bioportal mappings to Malaria Ontology (IDOMAL) ver1.1
Bioportal mappings to Human disease (DOID) ver1.296
Bioportal mappings to MGED Ontology (MO) ver1.3.1.1
Ele Holloway
Bioportal mappings to SNOMED Clinical Terms (SNOMEDCT) ver2009_07_31
James Malone
Bioportal mappings to Drosophila gross anatomy (FBbt) ver1.38
Bioportal mappings to Mammalian phenotype (MP) ver1.399
Bioportal mappings to NCI Thesaurus (NCIt) ver10.01
Bioportal mappings to Medical Subject Headings (MSH) ver2010_2009_08_17
Bioportal mappings to Foundational Model of Anatomy (FMA) ver3.1
Bioportal mappings to Cell type (CL) ver1.43
Bioportal mappings to Foundational Model of Anatomy (FMA) ver3.0
Bioportal mappings to SNOMED Clinical Terms (SNOMEDCT) ver2010_01_31
Helen Parkinson
Bioportal mappings to NIFSTD (nif) ver1.9.5
Bioportal mappings to Phenotypic quality (PATO) ver1.221
Bioportal mappings to Teleost Anatomy Ontology (TAO) ver1.195
Date: 4 November 2010
Bioportal mappings to Units of measurement (UO) ver1.32
Bioportal mappings to Experimental Factor Ontology (EFO) ver132
Bioportal mappings to Human disease (DOID) ver1.297
Bioportal mappings to NCI Thesaurus (NCIt) ver10.03
Bioportal mappings to Chemical entities of biological interest (CHEBI) ver1.66
Bioportal mappings to Gene Ontology (GO) ver1.1045
Bioportal mappings to BRENDA tissue / enzyme source (BTO) ver1.3
Bioportal mappings to NIFSTD (nif) ver1.8
Bioportal mappings to Mosquito gross anatomy (TGMA) ver1.10
Bioportal mappings to Gene Ontology (GO) ver1.886
Bioportal mappings to Chemical entities of biological interest (CHEBI) ver1.73
2.9.1
Bioportal mappings to Mammalian phenotype (MP) ver1.347
Bioportal mappings to NCBI organismal classification (null) ver1.2
Bioportal mappings to Phenotypic quality (PATO) ver1.270
Bioportal mappings to Ontology for Biomedical Investigations (OBI) ver2009-11-06 Philly (aka version 1.0) Release Candidate
Bioportal mappings to Gene Ontology (GO) ver1.1044
Bioportal mappings to Teleost anatomy and development (TAO) ver1.158
Mappings: CRISP Thesaurus Version 2.5.2.0
Bioportal mappings to NCBI organismal classification (NCBITaxon) ver1.2
Bioportal mappings to Cell type (CL) ver1.46
Mappings:The Arabidopsis Information Resource (TAIR)
Bioportal mappings to Zebrafish anatomy and development (ZFA) ver1.27
Bioportal mappings to Mammalian phenotype (MP) ver1.398
Mappings: The Jackson Lab
classified
Bioportal mappings to Human disease (DOID) ver1.192
Bioportal mappings to Malaria Ontology (IDOMAL) ver1.22
Bioportal mappings to Zebrafish anatomy and development (ZFA) ver1.30
Bioportal mappings to Minimal anatomical terminology (MAT) ver1.1
Bioportal mappings to Units of measurement (UO) ver1.27
Tomasz Adamusiak
Bioportal mappings to Drosophila gross anatomy (FBbt) ver1.33
Bioportal mappings to Microarray experimental conditions (MO) ver1.3.1.1
Bioportal mappings to Cell type (CL) ver1.47
Bioportal mappings to International Classification of Diseases (ICD-9) ver9
Mappings to Plant structure (PO)
James Malone
stage I endometrioid carcinoma
Ele Holloway
James Malone
D341Med
James Malone
CS57537 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311958
CS57537
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311958
Tomasz Adamusiak
enveloping layer
ZFA:0000086
James Malone
GM11994
Tomasz Adamusiak
tracheal primordium
FBbt:00005037
STRUCTURE_ChemicalName_IUPAC:6-chloro-1-(3-methylphenyl)-3-(prop-2-en-1-yl)-2,3,4,5-tetrahydro-1H-3-benzazepine-7,8-diol hydrobromide
DSSTox_CID:22634
Ele Holloway
Tomasz Adamusiak
STRUCTURE_Formula:C20H23BrClNO2
DSSTox_Generic_SID:42634
James Malone
CASRN:74115-10-9
SKF 83822 hydrobromide
synonymous with protocol
James Malone
true
A protocol factor is an experimental factor which describes factors that describe the protocol design of an experiment.
obsolete_protocol factor
dioxine
2,3,7,8-tetrachlorooxanthrene
2,3,7,8-Tetrachlorodibenzo-p-dioxin
2,3,7,8-tetrachlorodibenzodioxine
TCDD
InChIKey=HGUFODBRKLSHSI-UHFFFAOYAA
CHEBI:28119
http://www.ebi.ac.uk/efo/EFO_0001470
2,3,7,8-Tetrachlorodibenzodioxin
Clc1cc2Oc3cc(Cl)c(Cl)cc3Oc2cc1Cl
Tetrachlorodibenzodioxin
Dioxin
C12H4Cl4O2
InChI=1/C12H4Cl4O2/c13-5-1-9-10(2-6(5)14)18-12-4-8(16)7(15)3-11(12)17-9/h1-4H
A polychlorinated dibenzodioxine that has formula C12H4Cl4O2.
tetradioxin
true
Detected as synonym for neuron, deprecated in favour of it.
CL:0000540
obsolete_nerve cell
neuron[accessedResource: CL:0000540][accessDate: 10-05-2010]
nerve cell[accessedResource: CL:0000540][accessDate: 10-05-2010]
nerve cell
The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.[accessedResource: CL:0000540][accessDate: 10-05-2010]
James Malone
The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.
1.8
neuron
James Malone
http://www.ebi.ac.uk/efo/EFO_0001447
Archaea
Blood pumping organ composed of four chambers: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus.
FBbt:00003154
EMAPA:16105
1: A hollow muscular organ of vertebrate animals that by its rhythmic contraction acts as a force pump maintaining the circulation of the blood. n2: A structure in an invertebrate animal functionally analogous to the vertebrate heart.[accessedResource: BTO:0000562][accessDate: 04-11-2010]
FMAID:7088
Blood pumping organ composed of four components: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus.[accessedResource: ZFA:0000114][accessDate: 04-11-2010]
ZFA:0000114
Organ with cavitated organ parts, which is continuous with the systemic and
pulmonary arterial and venous trees. Examples: There is only one heart.
heart
TADS:0000147
EV:0100018
MFO:0080860
SAEL:47
MAT:0000036
adult heart[accessedResource: FBbt:00003154][accessDate: 04-11-2010]
BTO:0000562
James Malone
Blood pumping organ composed of four components: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus.
XAO:0000064
1: A hollow muscular organ of vertebrate animals that by its rhythmic contraction acts as a force pump maintaining the circulation of the blood. n2: A structure in an invertebrate animal functionally analogous to the vertebrate heart.
adult heart
TAO:0000114
EHDAA:420
Blood pumping organ composed of four chambers: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus.[accessedResource: TAO:0000114][accessDate: 04-11-2010]
fenazaquin
120928-09-8
20476
4-[2-(4-tert-butylphenyl)ethoxy]quinazoline
40476
C20H22N2O
C21H29FO5
fludrocortisonum
InChIKey=AAXVEMMRQDVLJB-BULBTXNYBK
http://www.ebi.ac.uk/efo/EFO_0001536
[H][C@@]12CC[C@](O)(C(=O)CO)[C@@]1(C)C[C@H](O)[C@@]3(F)[C@@]2([H])CCC4=CC(=O)CC[C@]34C
9-fluoro-11beta,17,21-trihydroxypregn-4-ene-3,20-dione
A mineralocorticoid that has formula C21H29FO5.
CHEBI:50885
fludrocortisona
9ALPHA-FLUOROCORTISOL
InChI=1/C21H29FO5/c1-18-7-5-13(24)9-12(18)3-4-15-14-6-8-20(27,17(26)11-23)19(14,2)10-16(25)21(15,18)22/h9,14-16,23,25,27H,3-8,10-11H2,1-2H3/t14-,15-,16-,18-,19-,20-,21-/m0/s1
fludrocortisone
Tomasz Adamusiak
floor plate rhombomere 8
ZFA:0000765
sulmazole
DSSTox_CID:20617
Tomasz Adamusiak
STRUCTURE_ChemicalName_IUPAC:2-[2-methoxy-4-(methylsulfinyl)phenyl]-1H-imidazo[4,5-b]pyridine
STRUCTURE_Formula:C14H13N3O2S
James Malone
Ele Holloway
CASRN:73384-60-8
DSSTox_Generic_SID:40617
James Malone
A process in which an organism or part of an organism participates towards the generation of offspring.
reproductive process
permethrin
22292
2292
52645-53-1
C21H20Cl2O3
[3-(phenyloxy)phenyl]methyl 3-(2,2-dichloroethenyl)-2,2-dimethylcyclopropanecarboxylate
Ele Holloway
James Malone
SM1
James Malone
Dorsal skin is a skin found at the dorsal area of an animal.
dorsal skin
Tomasz Adamusiak
DSSTox_Generic_SID:40625
DSSTox_CID:20625
thiostrepton
CASRN:1393-48-2
STRUCTURE_ChemicalName_IUPAC:N-{3-[(3-amino-3-oxoprop-1-en-2-yl)amino]-3-oxoprop-1-en-2-yl}-2-[(11E)-37-(butan-2-yl)-18-(2,3-dihydroxybutan-2-yl)-11-ethylidene-59-hydroxy-8,31-bis(1-hydroxyethyl)-26,40,46-trimethyl-43-methylidene-6,9,16,23,28,38,41,44,47-nonaoxo-27-oxa-3,13,20,56-tetrathia-7,10,17,24,36,39,42,45,48,52,58,61,62,63,64-pentadecaazanonacyclo[23.23.9.329,35.12,5.112,15.119,22.154,57.01,53.032,60]tetrahexaconta-2(64),4,12(63),19(62),21,29,31,33,51,54,57,60-dodecaen-51-yl]-1,3-thiazole-4-carboxamide
James Malone
Ele Holloway
STRUCTURE_Formula:C72H85N19O18S5
Ele Holloway
James Malone
Tomasz Adamusiak
erythropoietin
CASRN:11096-26-7
DSSTox_Generic_SID:39678
Drosophila melanogaster cell line
6-((1-Methyl-4-nitro-1H-imidazol-5-yl)thio)-1H-purine
InChIKey=LMEKQMALGUDUQG-KZFATGLACK
http://www.ebi.ac.uk/efo/EFO_0001491
azathioprine
Cn1cnc(c1Sc1ncnc2nc[nH]c12)[N+]([O-])=O
CHEBI:2948
Imuran (TN)
James Malone
6-(1'-Methyl-4'-nitro-5'-imidazolyl)-mercaptopurine
6-[(1-methyl-4-nitro-1H-imidazol-5-yl)sulfanyl]-7H-purine
A thiopurine that has formula C9H7N7O2S.
C9H7N7O2S
InChI=1/C9H7N7O2S/c1-15-4-14-7(16(17)18)9(15)19-8-5-6(11-2-10-5)12-3-13-8/h2-4H,1H3,(H,10,11,12,13)/f/h10H
reproductive system - plant[accessedResource: MAT:0000514][accessDate: 04-11-2010]
James Malone
plant reproductive system structure
MAT:0000514
reproductive system - plant
Tomasz Adamusiak
larval labral segment
FBbt:00005617
James Malone
CHEBI:9288
N-D-Glucosyl-(2)-N'-nitrosomethylurea
streptozocine
streptozocinum
InChI=1/C8H15N3O7/c1-11(10-17)8(16)9-4-6(14)5(13)3(2-12)18-7(4)15/h3-7,12-15H,2H2,1H3,(H,9,16)/t3-,4-,5-,6-,7+/m1/s1/f/h9H
C8H15N3O7
An antibiotic that is produced by Streptomyces achromogenes. It is used as an antineoplastic agent and to induce diabetes in experimental animals.
A N-acylglucosamine that has formula C8H15N3O7.
Streptozocinium
2-Deoxy-2-(((methylnitrosoamino)carbonyl)amino)-D-glucopyranose
streptozotocin
InChIKey=ZSJLQEPLLKMAKR-CQRXUCDYDU
estreptozocina
2-deoxy-2-{[methyl(nitroso)carbamoyl]amino}-alpha-D-glucopyranose
2-Deoxy-2-(3-methyl-3-nitrosoureido)-D-glucopyranose
Streptozocin (TN ZANOSAR)
Zanosar
streptozocin
N-D-Glucosyl-(2)-N'-nitrosomethylharnstoff
CN(N=O)C(=O)N[C@H]1[C@@H](O)O[C@H](CO)[C@@H](O)[C@@H]1O
http://www.ebi.ac.uk/efo/EFO_0001615
Tomasz Adamusiak
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#transfect
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#transfect[accessedResource: MO_849][accessDate: 04-11-2010]
transfection
MO_849
Jie Zheng
The process of bringing about genetic alteration of any cell or organism by a variety of means including recombinant DNA technology, viruses, chemical mutagens and X-rays.
A person of Mexican, Puerto Rican, Cuban, Central or South American or other Spanish culture or origin, regardless of race. An arbitrary ethnic classification.[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
NCIt:C17459
Hispanics or Latinos
Latino Population
A person of Mexican, Puerto Rican, Cuban, Central or South American or other Spanish culture or origin, regardless of race. An arbitrary ethnic classification.
Spanish Origin[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Hispanic Populations
Tomasz Adamusiak
Latino Population[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Hispanics or Latinos[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Hispanic or Latino[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Hispanic Populations[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Spanish Origin
Hispanic or Latino
Tomasz Adamusiak
Hispanic
Ele Holloway
James Malone
SBC-3
A SBC-3 is a cell line.
A SBC-3 is both something that is bearer of a small cell lung carcinoma, and something that derives from a
Homo sapiens.
JCRB0818
James Malone
grade III Astrocytic tumor[accessedResource: DOID:3078][accessDate: 04-11-2010]
astrocytoma, anaplastic (morphologic abnormality)[accessedResource: DOID:3078][accessDate: 04-11-2010]
grade III Astrocytic tumor
Ele Holloway
astrocytoma, anaplastic (morphologic abnormality)
anaplastic astrocytoma
DOID:3078
James Malone
U87
Ele Holloway
James Malone
OE33
GeneRIF:12579497
Adenocarcinoma of the Lung
GeneRIF:12420220
GeneRIF:15819721
GeneRIF:16061866
GeneRIF:12414512
GeneRIF:14633739
GeneRIF:15809747
GeneRIF:16109772
GeneRIF:12644570
DOID:3910
GeneRIF:12824892
SNOMEDCT:254626006
GeneRIF:12234996
GeneRIF:14511407
GeneRIF:12687616
GeneRIF:12163326
A carcinoma characterized by the presence of malignant glandular epithelial cells. There is a male predilection with a male to female ratio of 2:1. Usually lung adenocarcinoma is asymptomatic and is identified through screening studies or as an incidental radiologic finding. If clinical symptoms are present they include shortness of breath, cough, hemoptysis, chest pain, and fever. Tobacco smoke is a known risk factor.[accessedResource: NCIt:C3512][accessDate: 04-11-2010]
GeneRIF:12918063
GeneRIF:12152160
GeneRIF:12698189
adenocarcinoma of lung (disorder)
GeneRIF:11891209
GeneRIF:14607333
GeneRIF:14996858
GeneRIF:12114441
GeneRIF:12942568
GeneRIF:14634100
Adenocarcinoma of the Lung[accessedResource: NCIt:C3512][accessDate: 04-11-2010]
Adenocarcinoma of lung (disorder)[accessedResource: SNOMEDCT:254626006][accessDate: 04-11-2010]
GeneRIF:15216431
A carcinoma characterized by the presence of malignant glandular epithelial cells. There is a male predilection with a male to female ratio of 2:1. Usually lung adenocarcinoma is asymptomatic and is identified through screening studies or as an incidental radiologic finding. If clinical symptoms are present they include shortness of breath, cough, hemoptysis, chest pain, and fever. Tobacco smoke is a known risk factor.
GeneRIF:15976377
GeneRIF:12374671
GeneRIF:16108829
GeneRIF:15944787
GeneRIF:15709189
Adenocarcinoma of Lung[accessedResource: NCIt:C3512][accessDate: 04-11-2010]
GeneRIF:15197584
GeneRIF:16184720
GeneRIF:15688187
GeneRIF:12164330
GeneRIF:11836605
GeneRIF:15660698
Adenocarcinoma of Lung
GeneRIF:12503077
GeneRIF:15943786
GeneRIF:14744769
James Malone
GeneRIF:16116610
GeneRIF:8564085
lung adenocarcinoma
GeneRIF:11801602
GeneRIF:16232198
NCIt:C3512
GeneRIF:14735190
GeneRIF:11957142
GeneRIF:15815931
GeneRIF:12923324
GeneRIF:12883699
Tomasz Adamusiak
vagal ganglion 4
ZFA:0001305
lymphoma or leukaemia cell line
Tomasz Adamusiak
anterior lateral line ganglion
ZFA:0001391
InChIKey=PBKZPPIHUVSDNM-LKCFEDHXDC
http://www.ebi.ac.uk/efo/EFO_0001499
[H][C@]12CC[C@@]3(C)[C@@]([H])(CC[C@@]3(O)CCC([O-])=O)[C@]1([H])C=CC1=CC(=O)CC[C@]21C
InChI=1/C22H30O4/c1-20-9-5-15(23)13-14(20)3-4-16-17(20)6-10-21(2)18(16)7-11-22(21,26)12-8-19(24)25/h3-4,13,16-18,26H,5-12H2,1-2H3,(H,24,25)/p-1/t16-,17+,18+,20+,21+,22-/m1/s1/fC22H29O4/q-1
canrenoate
3-[(8R,9S,10R,13S,14S,17R)-17-hydroxy-10,13-dimethyl-3-oxo-2,3,8,9,10,11,12,13,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]propanoate
C22H29O4
17beta-hydroxy-3-oxo-21a-homopregna-4,6-dien-21a-oate
A steroid acid anion that has formula C22H29O4.
CHEBI:50159
CL:0000785
A B cell that is mature, having left the bone marrow. Initially, these cells are IgM-positive and IgD-positive, and they can be activated by antigen.[accessedResource: CL:0000785][accessDate: 04-11-2010]
A B cell that is mature, having left the bone marrow. Initially, these cells are IgM-positive and IgD-positive, and they can be activated by antigen.
mature B cell
mature B lymphocyte[accessedResource: CL:0000785][accessDate: 04-11-2010]
mature B lymphocyte
721 B lymphoblasts
James Malone
table salt
InChI=1/ClH.Na/h1H;/q;+1/p-1/fCl.Na/h1h;/q-1;m
common salt
halite
natrii chloridum
cloruro sodico
Natriumchlorid
Kochsalz
salt
http://www.ebi.ac.uk/efo/EFO_0001611
sodium chloride
chlorure de sodium
CHEBI:26710
InChIKey=FAPWRFPIFSIZLT-ZKGBBZBBCO
ClNa
rock salt
An inorganic sodium salt that has formula ClNa.
NaCl
A metal chloride salt with a Na(+) counterion.
pancreatic ductal carcinoma[accessedResource: DOID:3587][accessDate: 04-11-2010]
Ele Holloway
James Malone
pancreatic ductal adenocarcinoma
DOID:3587
pancreatic ductal carcinoma
A form of RHABDOMYOSARCOMA arising primarily in the head and neck, especially the orbit, of children below the age of 10. The cells are smaller than those of other rhabdomyosarcomas and are of two basic cell types: spindle cells and round cells. This cancer is highly sensitive to chemotherapy and has a high cure rate with multi-modality therapy. (From Holland et al., Cancer Medicine, 3d ed, p2188)[accessedResource: MSH:D018233][accessDate: 04-11-2010]
GeneRIF:15024701
Embryonal rhabdomyosarcoma (disorder)
Embryonal rhabdomyosarcoma, pleomorphic[accessedResource: SNOMEDCT:14269005][accessDate: 04-11-2010]
A poorly circumscribed morphologic variant of rhabdomyosarcoma. It is characterized by the presence of primitive skeletal muscle differentiation in any stage of myogenesis. There are three histologic types, spindle cell, botryoid and anaplastic.[accessedResource: NCIt:C8971][accessDate: 04-11-2010]
Sarcoma botryoides
GeneRIF:15184910
NCIt:C8971
MSH:D018233
SNOMEDCT:404051002
embryonal rhabdomyosarcoma
GeneRIF:15475955
Embryonal rhabdomyosarcoma, pleomorphic
Embryonal rhabdomyosarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:14269005][accessDate: 04-11-2010]
Botryoid sarcoma[accessedResource: SNOMEDCT:14269005][accessDate: 04-11-2010]
GeneRIF:11846302
A poorly circumscribed morphologic variant of rhabdomyosarcoma. It is characterized by the presence of primitive skeletal muscle differentiation in any stage of myogenesis. There are three histologic types, spindle cell, botryoid and anaplastic.
DOID:3246
Rhabdomyosarcomas, Embryonal[accessedResource: MSH:D018233][accessDate: 04-11-2010]
James Malone
GeneRIF:12865925
GeneRIF:12904596
SNOMEDCT:14269005
Botryoid sarcoma
Embryonal rhabdomyosarcoma (disorder)[accessedResource: DOID:3246][accessDate: 04-11-2010]
Sarcoma botryoides[accessedResource: SNOMEDCT:14269005][accessDate: 04-11-2010]
Embryonal Rhabdomyosarcomas
Embryonal rhabdomyosarcoma (morphologic abnormality)
A form of RHABDOMYOSARCOMA arising primarily in the head and neck, especially the orbit, of children below the age of 10. The cells are smaller than those of other rhabdomyosarcomas and are of two basic cell types: spindle cells and round cells. This cancer is highly sensitive to chemotherapy and has a high cure rate with multi-modality therapy. (From Holland et al., Cancer Medicine, 3d ed, p2188)
James Malone
Natural Language Generator 8th April 2010
A CM7-1 is a cell line.
A CM7-1 is both something that derives from a mus musculus, and something that derives from an embryonic stem cell.
Ele Holloway
CM7-1
Ele Holloway
James Malone
PC-9
An icosa-5,8,11,14-tetraenoic acid that has formula C20H32O2.
CHEBI:15843
CCCCC\\C=C/C\\C=C/C\\C=C/C\\C=C/CCCC(O)=O
cis-Delta(5,8,11,14)-eicosatetraenoic acid
AA
(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoic acid
arachidonic acid
A 20-carbon, polyunsaturated omega-6 fatty acid and one of the essential fatty acids required by most mammals; the counterpart to the saturated arachidic acid found in peanut oil. It is present in cell membrane phospholipids and abundant in brain and muscle. Its involvement in cellular signaling (as a lipid second messenger) is complemented by its key role as an inflammatory intermediate. It is also a precursor in the production of eicosanoids.
InChI=1/C20H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20(21)22/h6-7,9-10,12-13,15-16H,2-5,8,11,14,17-19H2,1H3,(H,21,22)/b7-6-,10-9-,13-12-,16-15-/f/h21H
C20H32O2
Arachidonsaeure
http://www.ebi.ac.uk/efo/EFO_0001489
(5Z,8Z,11Z,14Z)-Icosatetraenoic acid
InChIKey=YZXBAPSDXZZRGB-FSPJQBAYDG
ARA
cis-5,8,11,14-Eicosatetraenoic acid
all-cis-5,8,11,14-eicosatetraenoic acid
true
The time period elapsed since an identifiable point in the life cycle of an organism. If a developmental stage is specified, the identifiable point would be the beginning of that stage.
obsolete_clinical history age
James Malone
CS57827 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158851&type=germplasm
CS57827
http://www.arabidopsis.org/servlets/TairObject?id=1005158851&type=germplasm
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#homogenizer[accessedResource: MO_714][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0002018
A homogenizer is an instrument for the homogenization of various types of material, such as tissue, plant, food, soil, and many others.
homogenizer
MO_714
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#homogenizer
James Malone
GM12044
cefazolin
25953-19-9
non-alcoholic fatty liver disease
Nonalcoholic Fatty Liver Disease[accessedResource: NCIt:C84444][accessDate: 04-11-2010]
NAFLD - Nonalcoholic Fatty Liver Disease[accessedResource: NCIt:C84444][accessDate: 04-11-2010]
Nonalcoholic Fatty Liver Disease
A term referring to fatty replacement of the hepatic parenchyma which is not related to alcohol use.[accessedResource: NCIt:C84444][accessDate: 04-11-2010]
NCIt:C84444
NAFLD - Nonalcoholic Fatty Liver Disease
Tomasz Adamusiak
A term referring to fatty replacement of the hepatic parenchyma which is not related to alcohol use.
Ele Holloway
James Malone
CCFSTTG1
Ele Holloway
James Malone
superior colliculus
MA:0001068
James Malone
Kin-S49
Denotes the inhabitants of Japan, a person from there, or their descendants elsewhere.[accessedResource: NCIt:C43392][accessDate: 04-11-2010]
Tomasz Adamusiak
Denotes the inhabitants of Japan, a person from there, or their descendants elsewhere.
Japanese
NCIt:C43392
HCC1008
Ele Holloway
James Malone
Ele Holloway
James Malone
YPAC
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#genetic_modification_design[accessedResource: MO_447][accessDate: 04-11-2010]
Tomasz Adamusiak
genetic modification design
MO_447
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#genetic_modification_design
nickel(II) chloride hexahydrate
21170
41170
7791-20-0
H12Cl2NiO6
dichloronickel hexahydrate
Nucleus of third cranial nerve
Oculomotor nuclear complex
Nucleus of oculomotor nerve
Oculomotor nuclear complex[accessedResource: FMA:54510][accessDate: 04-11-2010]
James Malone
FMA:54510
Ele Holloway
Third cranial nerve nucleus
EV:0100250
oculomotor nucleus
tobramycin
(1S,2S,3R,4S,6R)-4,6-diamino-3-[(2,6-diamino-2,3,6-trideoxy-alpha-D-ribo-hexopyranosyl)oxy]-2-hydroxycyclohexyl 3-amino-3-deoxy-alpha-D-glucopyranoside
23680
32986-56-4
C18H37N5O9
James Malone
Irregular bone that articulates with other vertebrae, or with one other vertebra and the skull or the sacrum
vertebra
FMA:9914
MA:0000309
James Malone
CS57847 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158871&type=germplasm
CS57847
http://www.arabidopsis.org/servlets/TairObject?id=1005158871&type=germplasm
Any ganglion mother cell (FBbt:00005149) that is part of some embryo (FBbt:00000052).[accessedResource: FBbt:00001433][accessDate: 04-11-2010]
James Malone
Any ganglion mother cell (FBbt:00005149) that is part of some embryo (FBbt:00000052).
embryonic ganglion mother cell
FBbt:00001433
sodium nitroprusside
14402-89-2
16794
36794
C5FeN6Na2O
Sodium pentacyanonitrosylferrate
SNP
Tomasz Adamusiak
olfactory placode
ZFA:0000048
FBbt:00005541
P2 CardMes[accessedResource: FBbt:00005541][accessDate: 04-11-2010]
cardiogenic mesoderm
CardMes
CardMes[accessedResource: FBbt:00005541][accessDate: 04-11-2010]
cardiac mesoderm[accessedResource: FBbt:00005541][accessDate: 04-11-2010]
cardiac mesoderm primordium
CardMesP2
James Malone
cardiogenic mesoderm[accessedResource: FBbt:00005541][accessDate: 04-11-2010]
cardiac mesoderm
James Malone
A leaf component is a plant component which is part of a leaf.
leaf component
duplication: use EFO_0000945
1.4
limb bone[accessedResource: MAT:0000151][accessDate: 10-05-2010]
limb skeleton[accessedResource: MAT:0000151][accessDate: 10-05-2010]
obsolete_limb bone
James Malone
limb skeleton
MAT:0000151
limb bone
true
MA:0000688
James Malone
CS57850 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158874&type=germplasm
CS57850
http://www.arabidopsis.org/servlets/TairObject?id=1005158874&type=germplasm
Tomasz Adamusiak
presumptive rhombomere 6
ZFA:0001210
Tomasz Adamusiak
presumptive blood
ZFA:0000568
neuroleptic
neuroleptiques
Antipsychotic drugs are agents that control agitated psychotic behaviour, alleviate acute psychotic states, reduce psychotic symptoms, and exert a quieting effect.
major tranquilizing agents
http://www.ebi.ac.uk/efo/EFO_0001486
antipsychotic drug
neuroleptics
antipsychotiques
neuroleptic agents
neuroleptique
antipsychotic drugs
antipsychotic[accessedResource: NIFSTD:nlx_chem_20090603][accessDate: 04-11-2010]
NIFSTD:nlx_chem_20090603
antipsychotic agents
antipsychotics
major tranquilizers
Tomasz Adamusiak
grosser Tranquilizer
antipsychotic
Neuroleptikum
acute monocytic leukemia, FAB M5 (disorder)
acute monocytic leukaemia[accessedResource: DOID:8864][accessDate: 04-11-2010]
Leukemia, Myeloid, Acute, M5
Monoblastic Leukemias, Acute[accessedResource: MSH:D007948][accessDate: 04-11-2010]
MYELOID LEUKEMIA ACUTE M 05[accessedResource: MSH:D007948][accessDate: 04-11-2010]
acute monocytic leukaemia
Leukemia, Schilling-Type Myeloid
acute monocytic leukemia, morphology (morphologic abnormality)
acute monocytic leukemia, FAB M5 (disorder)[accessedResource: DOID:8864][accessDate: 04-11-2010]
GeneRIF:12547160
acute monocytic leukemia without mention of remission
acute Monoblastic Leukemia and acute Monocytic Leukemia[accessedResource: DOID:8864][accessDate: 04-11-2010]
acute monoblastic leukemia (disorder)[accessedResource: DOID:8864][accessDate: 04-11-2010]
Leukemia, Myeloid, Acute, M5[accessedResource: MSH:D007948][accessDate: 04-11-2010]
An acute myeloid leukemia in which 80% or more of the leukemic cells are of monocytic lineage including monoblasts, promonocytes, and MONOCYTES.
An acute myeloid leukemia in which 80% or more of the leukemic cells are of monocytic lineage including monoblasts, promonocytes, and MONOCYTES.[accessedResource: MSH:D007948][accessDate: 04-11-2010]
acute monocytic leukemia without mention of remission[accessedResource: DOID:8864][accessDate: 04-11-2010]
GeneRIF:15145445
Acute Monocytic Leukemias[accessedResource: MSH:D007948][accessDate: 04-11-2010]
MSH:D007948
Monoblastic Leukemias, Acute
acute monoblastic leukemia (disorder)
DOID:8864
Leukemias, Acute Monocytic
MYELOID LEUKEMIA ACUTE M 05
Leukemia, Acute Monoblastic[accessedResource: MSH:D007948][accessDate: 04-11-2010]
Leukemia, Acute Monoblastic
Tomasz Adamusiak
acute monocytic leukemia, morphology (morphologic abnormality)[accessedResource: DOID:8864][accessDate: 04-11-2010]
Myeloid Leukemia, Schilling-Type[accessedResource: MSH:D007948][accessDate: 04-11-2010]
acute monocytic leukemia
acute Monoblastic Leukemia and acute Monocytic Leukemia
James Malone
ICD9:206.0
MA:0000386
placenta
EV:0100119
BTO:0001078
FMAID:63934
MAT:0000279
James Malone
EVM:2000256
SAEL:84
The vascular organ in mammals except monotremes and marsupials that unites the fetus to the maternal uterus and mediates its metabolic exchanges through a more or less intimate association of uterine mucosal with chorionic and usually allantoic tissues; also: an analogous organ in another animal.
EV:3000466
The vascular organ in mammals except monotremes and marsupials that unites the fetus to the maternal uterus and mediates its metabolic exchanges through a more or less intimate association of uterine mucosal with chorionic and usually allantoic tissues; also: an analogous organ in another animal.[accessedResource: BTO:0001078][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0002652
Papio anubis
Olive Baboon
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#compound_treatment_design[accessedResource: MO_555][accessDate: 04-11-2010]
Tomasz Adamusiak
compound treatment design
MO_555
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#compound_treatment_design
One of four heart chambers.
EMAPA:16688
EHDAA:1265
FBbt:00005615
EV:0100018
mouth cavity[accessedResource: FBbt:00005615][accessDate: 04-11-2010]
cardiac atrium[accessedResource: BTO:0000903][accessDate: 04-11-2010]
TAO:0000471
cardiac atrium
In the heart, the atrium is an upper chamber found on both sides of the heart. The left atrium receives red, oxygenated blood from the lungs by way of the pulmonary veins. The right atrium receives dark red blood from the other parts of the body.
MFO:0080900
MA:0000073
One of four heart chambers.[accessedResource: TAO:0000471][accessDate: 04-11-2010]
MAT:0000496
General anatomical term which refers to a chamber or cavity to which are connected one or more chambers or passageways. Examples: right atrium of heart, atrium of middle nasal meatus, atrium of tympanic cavity, atrium of alveolus.
atrium
BTO:0000903
FMAID:85574
mouth cavity
ZFA0000471
atrial tissue[accessedResource: BTO:0000903][accessDate: 04-11-2010]
The paired upper chambers of the heart. The left atrium receives oxygenated blood from the pulmonary vein and pumps blood into the left ventricle. The right atrium receives venous deoxygenated blood from the entire body via the superior and inferior vena cavae and pumps blood into the right ventricle.
In the heart, the atrium is an upper chamber found on both sides of the heart. The left atrium receives red, oxygenated blood from the lungs by way of the pulmonary veins. The right atrium receives dark red blood from the other parts of the body.[accessedResource: BTO:0000903][accessDate: 04-11-2010]
James Malone
atrial tissue
Duplicate: use EFO_0000208
James Malone
obsolete_T lymphocyte
CL:0000542
true
T lymphoma cell
A cell of the B cell, T cell, or natural killer cell lineage.[accessedResource: CL:0000542][accessDate: 10-05-2010]
A cell of the B cell, T cell, or natural killer cell lineage.
1.7
James Malone
external carotid artery
FMA:10635
James Malone
gall tissue
MAT:0000351
NIFSTD:sao196989303
A 3-D extent quality inhering in a bearer by virtue of the bearer's amount of 3-dimensional space it occupies.
PATO:0000918
James Malone
A volume is a size quality which describes the amount of 3-dimensional space an object occupies.
A 3-D extent quality inhering in a bearer by virtue of the bearer's amount of 3-dimensional space it occupies.[accessedResource: PATO:0000918][accessDate: 04-11-2010]
NIFSTD:birnlex_2391
volume
Tomasz Adamusiak
pancreatic A cell[accessedResource: CL:0000171][accessDate: 04-11-2010]
CL:0000171
A type of enteocrine cell found in the periphery of the islets of Langerhans that secretes glucagon.[accessedResource: CL:0000171][accessDate: 04-11-2010]
Tomasz Adamusiak
pancreatic alpha cell[accessedResource: CL:0000171][accessDate: 04-11-2010]
pancreatic A cell
alpha cell
Jie Zheng
A type of enteocrine cell found in the periphery of the islets of Langerhans that secretes glucagon.
pancreatic alpha cell
Tomasz Adamusiak
I-YSL
ZFA:0000712
[X]Tuberculosis of other specified organs (disorder)[accessedResource: SNOMEDCT:187292005][accessDate: 04-11-2010]
Tuberculosis of other organs NOS (disorder)
TB - Tuberculosis[accessedResource: SNOMEDCT:56717001][accessDate: 04-11-2010]
Tuberculosis of other specified organs (disorder)
GeneRIF:15686559
Mycobacterium tuberculosis infection[accessedResource: SNOMEDCT:56717001][accessDate: 04-11-2010]
TB OF ORGAN NEC-CULT DX[accessedResource: ICD9:017.94][accessDate: 04-11-2010]
TB OF ORGAN NEC-MICRO DX[accessedResource: ICD9:017.93][accessDate: 04-11-2010]
GeneRIF:12596048
SNOMEDCT:371569005
TB OF ORGAN NEC-UNSPEC
GeneRIF:15860225
GeneRIF:15498158
Tuberculosis of other specified organs, tubercle bacilli not found by bacteriological examination, but tuberculosis confirmed histologically
SNOMEDCT:186275005
GeneRIF:15695641
GeneRIF:16267303
Infection due to Mycobacterium tuberculosis[accessedResource: SNOMEDCT:56717001][accessDate: 04-11-2010]
GeneRIF:12646604
GeneRIF:15879136
Tuberculosis pregnancy
TB OF ORGAN NEC-HISTO DX[accessedResource: ICD9:017.95][accessDate: 04-11-2010]
GeneRIF:16103355
SNOMEDCT:186282009
Tuberculosis of other specified organs, bacteriological or histological examination not done[accessedResource: ICD9:017.91][accessDate: 04-11-2010]
GeneRIF:12068984
A chronic, recurrent infection caused by the bacterium Mycobacterium tuberculosis. Tuberculosis (TB) may affect almost any tissue or organ of the body with the lungs being the most common site of infection. The clinical stages of TB are primary or initial infection, latent or dormant infection, and recrudescent or adult-type TB. Ninety to 95% of primary TB infections may go unrecognized. Histopathologically, tissue lesions consist of granulomas which usually undergo central caseation necrosis. Local symptoms of TB vary according to the part affected; acute symptoms include hectic fever, sweats, and emaciation; serious complications include granulomatous erosion of pulmonary bronchi associated with hemoptysis. If untreated, progressive TB may be associated with a high degree of mortality. This infection is frequently observed in immunocompromised individuals with AIDS or a history of illicit IV drug use. --2004[accessedResource: NCIt:C3423][accessDate: 04-11-2010]
Tuberculosis, postpartum[accessedResource: DOID:399][accessDate: 04-11-2010]
TB OF ORGAN NEC-CULT DX
Tuberculosis of other specified organs, tubercle bacilli not found (in sputum) by microscopy, but found by bacterial culture
Tuberculosis of other organs (disorder)[accessedResource: SNOMEDCT:186247008][accessDate: 04-11-2010]
Tuberculosis pregnancy[accessedResource: DOID:399][accessDate: 04-11-2010]
SNOMEDCT:186271001
Tuberculosis (disorder)
GeneRIF:15804490
GeneRIF:14500465
[X]Tuberculosis of other specified organs (disorder)
Tuberculosis NOS (disorder)[accessedResource: SNOMEDCT:186282009][accessDate: 04-11-2010]
Tuberculous
GeneRIF:15866927
Tuberculosis of other specified organs NOS[accessedResource: SNOMEDCT:186274009][accessDate: 04-11-2010]
GeneRIF:11791667
Tuberculosis, postpartum
Mycobacterium tuberculosis infection
Tuberculosis, NOS
A chronic, recurrent infection caused by the bacterium Mycobacterium tuberculosis. Tuberculosis (TB) may affect almost any tissue or organ of the body with the lungs being the most common site of infection. The clinical stages of TB are primary or initial infection, latent or dormant infection, and recrudescent or adult-type TB. Ninety to 95% of primary TB infections may go unrecognized. Histopathologically, tissue lesions consist of granulomas which usually undergo central caseation necrosis. Local symptoms of TB vary according to the part affected; acute symptoms include hectic fever, sweats, and emaciation; serious complications include granulomatous erosion of pulmonary bronchi associated with hemoptysis. If untreated, progressive TB may be associated with a high degree of mortality. This infection is frequently observed in immunocompromised individuals with AIDS or a history of illicit IV drug use. --2004
GeneRIF:15993364
Tuberculosis, antepartum[accessedResource: DOID:399][accessDate: 04-11-2010]
TB OF ORGAN NEC-HISTO DX
Tuberculous (qualifier value)[accessedResource: SNOMEDCT:371569005][accessDate: 04-11-2010]
Tuberculosis of other organs (disorder)
Tuberculosis of other specified organs NOS (disorder)
Tuberculosis of other specified organs, tubercle bacilli not found (in sputum) by microscopy, but found by bacterial culture[accessedResource: ICD9:017.94][accessDate: 04-11-2010]
TB - Tuberculosis
TB
ICD9:010-018.99
Tuberculosis of other organs NOS[accessedResource: SNOMEDCT:186275005][accessDate: 04-11-2010]
TB OF ORGAN NEC-UNSPEC[accessedResource: ICD9:017.90][accessDate: 04-11-2010]
TB OF ORGAN NEC-MICRO DX
Tuberculosis of other organs[accessedResource: ICD9:017][accessDate: 04-11-2010]
TB ORGAN NEC-EXAM UNKN
[X]Tuberculosis of other specified organs
Tuberculous[accessedResource: SNOMEDCT:371569005][accessDate: 04-11-2010]
Tuberculoma (finding)[accessedResource: DOID:399][accessDate: 04-11-2010]
Tuberculosis of other specified organs, tubercle bacilli not found by bacteriological examination, but tuberculosis confirmed histologically[accessedResource: ICD9:017.95][accessDate: 04-11-2010]
GeneRIF:15478069
Tuberculosis of other specified organs, tubercle bacilli found (in sputum) by microscopy
GeneRIF:12195379
GeneRIF:12244136
Tuberculosis of other organs
TB ORGAN NEC-EXAM UNKN[accessedResource: ICD9:017.92][accessDate: 04-11-2010]
MTB - Mycobacterium tuberculosis infection
SNOMEDCT:56717001
Tuberculosis NOS (disorder)
[X]Tuberculosis of other specified organs[accessedResource: SNOMEDCT:187292005][accessDate: 04-11-2010]
SNOMEDCT:186274009
GeneRIF:12391840
GeneRIF:15882420
Tuberculosis of other specified organs[accessedResource: SNOMEDCT:186271001][accessDate: 04-11-2010]
GeneRIF:12296850
GeneRIF:14979495
GeneRIF:12825894
GeneRIF:14568951
GeneRIF:12234259
GeneRIF:12751024
GeneRIF:12960337
GeneRIF:12753505
GeneRIF:15138193
ICD9:017.91
GeneRIF:15680239
GeneRIF:12942785
Tuberculosis of other specified organs
ICD9:017.9
GeneRIF:16077122
Tuberculosis of mother, with delivery[accessedResource: DOID:399][accessDate: 04-11-2010]
GeneRIF:15322009
Tuberculosis (disorder)[accessedResource: SNOMEDCT:56717001][accessDate: 04-11-2010]
ICD9:017.95
Tuberculosis NOS[accessedResource: SNOMEDCT:186282009][accessDate: 04-11-2010]
Tuberculoma (finding)
GeneRIF:15649891
GeneRIF:15187146
Tuberculosis of other specified organs, unspecified examination[accessedResource: ICD9:017.90][accessDate: 04-11-2010]
tuberculous abscess[accessedResource: DOID:399][accessDate: 04-11-2010]
Tuberculosis, antepartum
ICD9:017.90
Infection due to Mycobacterium tuberculosis (disorder)
Tuberculous (qualifier value)
Tuberculosis of other specified organs NOS (disorder)[accessedResource: SNOMEDCT:186274009][accessDate: 04-11-2010]
TB[accessedResource: NCIt:C3423][accessDate: 04-11-2010]
SNOMEDCT:187292005
GeneRIF:15039368
MTB - Mycobacterium tuberculosis infection[accessedResource: SNOMEDCT:56717001][accessDate: 04-11-2010]
Tuberculosis of other organs NOS (disorder)[accessedResource: SNOMEDCT:186275005][accessDate: 04-11-2010]
Tuberculosis of other specified organs, tubercle bacilli found (in sputum) by microscopy[accessedResource: ICD9:017.93][accessDate: 04-11-2010]
ICD9:017.94
James Malone
GeneRIF:15500449
SNOMEDCT:373576009
TB OF ORGAN NEC-OTH TEST
GeneRIF:12714269
GeneRIF:12934195
Tuberculosis of other specified organs NOS
GeneRIF:12075004
Infection due to Mycobacterium tuberculosis (disorder)[accessedResource: SNOMEDCT:373576009][accessDate: 04-11-2010]
GeneRIF:16136464
GeneRIF:11907104
Infection due to Mycobacterium tuberculosis
tuberculoma
GeneRIF:12391841
Tuberculosis of other specified organs, bacteriological or histological examination unknown (at present)[accessedResource: ICD9:017.92][accessDate: 04-11-2010]
GeneRIF:12218133
ICD9:017.93
Tuberculosis of other specified organs, bacteriological or histological examination not done
ICD9:017
Tuberculosis of other specified organs (disorder)[accessedResource: SNOMEDCT:186271001][accessDate: 04-11-2010]
DOID:399
Tuberculosis of other specified organs, tubercle bacilli not found by bacteriological or histological examination, but tuberculosis confirmed by other methods [inoculation of animals]
NCIt:C3423
Tuberculosis of other specified organs, bacteriological or histological examination unknown (at present)
ICD9:017.92
GeneRIF:12516771
GeneRIF:12368450
Tuberculosis of mother, with delivery
GeneRIF:12496428
tuberculous abscess
GeneRIF:15385470
GeneRIF:16224188
ICD9:017.96
GeneRIF:15295696
SNOMEDCT:186247008
tuberculosis
GeneRIF:16002675
tuberculoma[accessedResource: DOID:399][accessDate: 04-11-2010]
TB OF ORGAN NEC-NO EXAM
TB OF ORGAN NEC-OTH TEST[accessedResource: ICD9:017.96][accessDate: 04-11-2010]
GeneRIF:16177361
GeneRIF:12117995
GeneRIF:15061663
GeneRIF:12077261
GeneRIF:15599404
GeneRIF:15050961
GeneRIF:15863395
GeneRIF:15774900
Tuberculosis of other specified organs, unspecified examination
GeneRIF:12531774
Tuberculosis of other specified organs, tubercle bacilli not found by bacteriological or histological examination, but tuberculosis confirmed by other methods [inoculation of animals][accessedResource: ICD9:017.96][accessDate: 04-11-2010]
Tuberculosis of other organs NOS
TB OF ORGAN NEC-NO EXAM[accessedResource: ICD9:017.91][accessDate: 04-11-2010]
GeneRIF:14551880
GeneRIF:11801672
GeneRIF:15879133
Tomasz Adamusiak
ILSXISS22/TejJ
http://jaxmice.jax.org/strain/009264.html
Hydroxybenzene
Carbolsaeure
InChI=1/C6H6O/c7-6-4-2-1-3-5-6/h1-5,7H
PhOH
Benzenol
Ele Holloway
acide carbolique
James Malone
Karbolsaeure
C6H6O
http://www.ebi.ac.uk/efo/EFO_0002417
Phenic acid
acide phenique
Oc1ccccc1
A phenol that has formula C6H6O.
A member of the phenols that has formula C6H6O.
InChIKey=ISWSIDIOOBJBQZ-UHFFFAOYAI
Phenylic acid
carbolic acid
phenol
CHEBI:15882
Tomasz Adamusiak
caudal division of the internal carotid artery
ZFA:0001051
3rd instar larva
James Malone
embryonic anal pad
FBbt:00005748
James Malone
apoptotic amnioserosa
FBbt:00005556
Azetylsalizylsaeure
CHEBI:15365
Acetylsalicylsaeure
salicylic acid acetate
http://www.ebi.ac.uk/efo/EFO_0001463
acide 2-(acetyloxy)benzoique
C9H8O4
2-(acetyloxy)benzoic acid
2-acetoxybenzoic acid
aspirin
acetylsalicylic acid
o-carboxyphenyl acetate
O-acetylsalicylic acid
o-acetoxybenzoic acid
Easprin
InChIKey=BSYNRYMUTXBXSQ-WXRBYKJCCW
acido acetilsalicilico
ASA
Acetylsalicylate
A benzoic acid derivative carrying an acetoxy group at the 2-position.
InChI=1/C9H8O4/c1-6(10)13-8-5-3-2-4-7(8)9(11)12/h2-5H,1H3,(H,11,12)/f/h11H
2-Acetoxybenzenecarboxylic acid
Benzoic acid carrying an acetoxy group at the 2-position.
acidum acetylsalicylicum
http://www.ebi.ac.uk/efo/EFO_0001462
acide acetylsalicylique
CC(=O)Oc1ccccc1C(O)=O
PO:0009004
The individual or generation of a plant exhibiting alternation of generations that bears sex organs.[accessedResource: BTO:0000495][accessDate: 04-11-2010]
James Malone
MAT:0000004
The individual or generation of a plant exhibiting alternation of generations that bears sex organs.
BTO:0000495
gametophyte
ZEA:0015175
CHEBI:35554
James Malone
http://www.ebi.ac.uk/efo/EFO_0001846
A drug that affects the rate or intensity of cardiac contraction, blood vessel diameter or blood volume.
cardiovascular drug
cardiovascular agent
cardiovascular drugs
Newborn[accessedResource: NIFSTD:birnlex_699][accessDate: 04-11-2010]
NEWBORN (0-27 DAYS)
NCIt:C16731
James Malone
An infant during the first month after birth.[accessedResource: NCIt:C16731][accessDate: 04-11-2010]
Tomasz Adamusiak
neonate
NEWBORN (0-27 DAYS)[accessedResource: NCIt:C16731][accessDate: 04-11-2010]
Neonatal
NIFSTD:birnlex_699
NIFSTD:birnlex_429
Neonatal[accessedResource: NCIt:C16731][accessDate: 04-11-2010]
An infant during the first month after birth.
Newborn
A study in which participants are examined at only a single time for characteristics of a disease.[accessedResource: NCIt:C53310][accessDate: 04-11-2010]
James Malone
Tomasz Adamusiak
A study in which participants are examined at only a single time for characteristics of a disease.
cross sectional study
NCIt:C53310
Ele Holloway
James Malone
COLO320HSR
James Malone
CS57732 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158756&type=germplasm
CS57732
http://www.arabidopsis.org/servlets/TairObject?id=1005158756&type=germplasm
An Islet cell is a pancreatic cell that produces and secretes hormones such as insulin and glucagon.
A pancreatic cell that produces and secretes hormones such as insulin and glucagon.[accessedResource: NCIt:C32885][accessDate: 04-11-2010]
Tomasz Adamusiak
A pancreatic cell that produces and secretes hormones such as insulin and glucagon.
Jie Zheng
islet cell
NCIt:C32885
calciol
67-97-0
Tomasz Adamusiak
paraventricular organ
ZFA:0000475
An artery that conveys venous blood from the heart to the lungs.
NCIt:C12774
Pulmonary Trunk[accessedResource: NCIt:C12774][accessDate: 04-11-2010]
An artery arising from the right ventricle of the heart that carries deoxygenated blood to the lungs.[accessedResource: NCIt:C12774][accessDate: 04-11-2010]
pulmonary artery
James Malone
An artery that conveys venous blood from the heart to the lungs.[accessedResource: BTO:0000778][accessDate: 04-11-2010]
An artery arising from the right ventricle of the heart that carries deoxygenated blood to the lungs.
Pulmonary Trunk
BTO:0000778
Ele Holloway
James Malone
REC1
Tomasz Adamusiak
rotavirus infection
Rotavirus infectious disease[accessedResource: DOID:4887][accessDate: 04-11-2010]
DOID:4887
Rotavirus infectious disease
Ele Holloway
James Malone
The area of the plant from where the stamen is shed.
stamen abscission zone
James Malone
An experiment where chromatin immunoprecipitation (ChIP) is used in combination with microarray technology.
ChIP-Chip
<WEB> http://en.wikipedia.org/wiki/ChIP-on-chip
Tomasz Adamusiak
hippocampus CA4
MA:0000953
http://neurolex.org/wiki/Category:Hilus_of_dentate_gyrus
RM82
Ele Holloway
James Malone
A RM 82 is a cell line.
A RM 82 is both something that is bearer of a 39 s sarcoma, and something that derives from a Homo
sapiens.
RM 82
Dilated cardiomyopathy secondary to viral myocarditis (disorder)[accessedResource: SNOMEDCT:30496006][accessDate: 04-11-2010]
Dilated cardiomyopathy secondary to viral myocarditis[accessedResource: SNOMEDCT:30496006][accessDate: 04-11-2010]
Tomasz Adamusiak
viral cardiomyopathy
SNOMEDCT:30496006
Dilated cardiomyopathy secondary to viral myocarditis
Dilated cardiomyopathy secondary to viral myocarditis (disorder)
trans-zeatin
(2E)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol
1637-39-4
20631
40631
C10H13N5O
MAT:0000343
James Malone
Structures containing a collection of nerve cell bodies. (Source: BioGlossary, www.Biology-Text.com)
A group of nerve cell bodies located outside the central nervous system. The term is occasionally applied to certain nuclear groups within the brain or spinal cord, such as the basal ganglia.
EHDAA:918
XAO:0000209
ganglia
ganglion
A group of nerve cell bodies located outside the central nervous system. The term is occasionally applied to certain nuclear groups within the brain or spinal cord, such as the basal ganglia.[accessedResource: BTO:0000497][accessDate: 04-11-2010]
Structures containing a collection of nerve cell bodies. (Source: BioGlossary, www.Biology-Text.com)[accessedResource: TAO:0000190][accessDate: 04-11-2010]
neural ganglion[accessedResource: BTO:0000497][accessDate: 04-11-2010]
TAO:0000190
BTO:0000497
neural ganglion
EMAPA:16658
ganglia[accessedResource: TAO:0000190][accessDate: 04-11-2010]
CHEBI:37733
James Malone
http://www.ebi.ac.uk/efo/EFO_0001860
cholinesterase inhibitor
James Malone
CS57541 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158565&type=germplasm
CS57541
http://www.arabidopsis.org/servlets/TairObject?id=1005158565&type=germplasm
XAO:0000132
EV:0100088
MA:0000324
EHDAA:2189
MAT:0000024
ZFA:0000036
James Malone
TAO:0000036
EMAPA:16840
liver and biliary system
James Malone
Duplicate use EFO_0000605
JAX:000664
A/J is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/000664.html
obsolete_C57BL/6J
true
1.8
C57BL6
rosette stage
DOID:5605
Infiltrating Medullary Carcinoma of Breast
Medullary Carcinoma of the Breast
Invasive Medullary Carcinoma of the Breast
An infiltrating breast carcinoma with a relatively favorable prognosis. It is an uncommon carcinoma, accounting for fewer than 1% of all infiltrating breast carcinomas. It is well circumscribed, with soft cut surface and often of considerable size. Microscopically, the predominant growth pattern is syncytial with broad anastomosing bands or sheets of malignant cells. The malignant cells are round with abundant cytoplasm and vesicular nuclei. The sheets of malignant cells are associated with a marked lymphoplasmacytic infiltrate. Glandular or tubular structures are absent.
Medullary Carcinoma of the Breast[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
Medullary breast carcinoma with lymphoid Stroma
Medullary Carcinoma of Breast[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
Infiltrating Medullary Carcinoma of the Breast
Medullary Breast Carcinoma with Lymphoid Stroma[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
Infiltrating Medullary Carcinoma of Breast[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
medullary breast carcinoma
Infiltrating Medullary Carcinoma of the Breast[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
Invasive Medullary Breast Carcinoma[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
Medullary Carcinoma of Breast
Invasive Medullary Carcinoma of the Breast[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
James Malone
Invasive Medullary Carcinoma of Breast[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
Invasive Medullary Carcinoma of Breast
Invasive Medullary Breast Carcinoma
NCIt:C9119
An infiltrating breast carcinoma with a relatively favorable prognosis. It is an uncommon carcinoma, accounting for fewer than 1% of all infiltrating breast carcinomas. It is well circumscribed, with soft cut surface and often of considerable size. Microscopically, the predominant growth pattern is syncytial with broad anastomosing bands or sheets of malignant cells. The malignant cells are round with abundant cytoplasm and vesicular nuclei. The sheets of malignant cells are associated with a marked lymphoplasmacytic infiltrate. Glandular or tubular structures are absent.[accessedResource: NCIt:C9119][accessDate: 04-11-2010]
An assay in which the transcriptome of a biological sample is analysed using array technology.
transcription profiling by array
CHEBI:38498
James Malone
http://www.ebi.ac.uk/efo/EFO_0001869
mitochondrial NADH:ubiquinone reductase inhibitor
mitochondrial NADH dehydrogenase inhibitor
mitochondrial complex I inhibitor
mitochondrial complex I inhibitors
James Malone
A type of carcinoma derived from glandular tissue or in which tumor cells form recognizable glandular structures.
adenocarcinoma
CRISP Thesaurus 2006, Term Number 2000-0386, http://crisp.cit.nih.gov/Thesaurus/00000107.htm Date accessed: 1st Novemeber 2007
Ele Holloway
SNB19
James Malone
Tomasz Adamusiak
MCC:0000434
SNB-19
Tomasz Adamusiak
central brain anlage
FBbt:00015256
sham therapy
NCIt:C753
placebo
sham therapy[accessedResource: NCIt:C753][accessDate: 04-11-2010]
An inactive substance, treatment or procedure that is intended to provide baseline measurements for the experimental protocol of a clinical trial.[accessedResource: NCIt:C753][accessDate: 04-11-2010]
PLCB[accessedResource: NCIt:C753][accessDate: 04-11-2010]
PLCB
An inactive substance, treatment or procedure that is intended to provide baseline measurements for the experimental protocol of a clinical trial.
James Malone
Tomasz Adamusiak
pancreatic bud
ZFA:0001390
C2H6OS
A sulfoxide that has formula C2H6OS.
dimethylsulfoxyde
James Malone
dimethyl sulfoxide
dimetil sulfoxido
S(O)Me2
(methanesulfinyl)methane
(CH3)2SO
InChI=1/C2H6OS/c1-4(2)3/h1-2H3
A 2-carbon sulfoxide in which the sulfur atom has two methyl substituents.
http://www.ebi.ac.uk/efo/EFO_0001523
InChIKey=IAZDPXIOMUYVGZ-UHFFFAOYAR
dimethyli sulfoxidum
dimethyl sulfur oxide
CHEBI:28262
dmso
sulfinylbis(methane)
Dimethylsulfoxid
dimethyl sulphoxide
CS(C)=O
methylsulfinylmethane
Tomasz Adamusiak
posterior lateral plate mesoderm
ZFA:0005042
Tomasz Adamusiak
trabecular layer
ZFA:0005059
James Malone
DSSTox_CID:22579
STRUCTURE_Formula:C22H26FN3O2
STRUCTURE_ChemicalName_IUPAC:8-[3-(4-fluorophenoxy)propyl]-1-phenyl-1,3,8-triazaspiro[4.5]decan-4-one
AMI-193
Ele Holloway
CASRN:510-74-7
DSSTox_Generic_SID:42579
8-[3-(4-fluorophenoxy)propyl]-1-phenyl-1,3,8-triazaspir o[4.5]-decanone
Tomasz Adamusiak
James Malone
Ele Holloway
F13
Normal pancreatic cell line
Jie Zheng
Tomasz Adamusiak
proximal portion of circumflex branch of left coronary artery
FMAID:3897
true
redundant use material entity
obsolete_biomaterial factor
GeneRIF:14688470
DOID:4989
GeneRIF:12765848
GeneRIF:12227654
GeneRIF:15458925
GeneRIF:15237442
GeneRIF:15215328
GeneRIF:11961487
James Malone
GeneRIF:15775704
Pancreatitis NOS
Pancreatitides
GeneRIF:16230078
GeneRIF:12360463
GeneRIF:14526128
GeneRIF:16038043
SNOMEDCT:75694006
Inflammation of the pancreas.[accessedResource: NCIt:C3306][accessDate: 04-11-2010]
GeneRIF:15786540
GeneRIF:11825647
GeneRIF:15316224
Pancreatitis (disorder)
GeneRIF:12011155
GeneRIF:12360464
INFLAMMATION of the PANCREAS. Pancreatitis is classified as acute unless there are computed tomographic or endoscopic retrograde cholangiopancreatographic findings of CHRONIC PANCREATITIS (International Symposium on Acute Pancreatitis, Atlanta, 1992). The two most common forms of acute pancreatitis are ALCOHOLIC PANCREATITIS and gallstone pancreatitis.[accessedResource: MSH:D010195][accessDate: 04-11-2010]
Pancreatitides[accessedResource: MSH:D010195][accessDate: 04-11-2010]
pancreatitis
GeneRIF:15572849
GeneRIF:12401800
GeneRIF:11462247
GeneRIF:12825076
Pancreatitis (disorder)[accessedResource: DOID:4989][accessDate: 04-11-2010]
MSH:D010195
NCIt:C3306
GeneRIF:11702203
Pancreatitis, NOS[accessedResource: SNOMEDCT:75694006][accessDate: 04-11-2010]
GeneRIF:14762792
Inflammation of the pancreas.
GeneRIF:12120224
GeneRIF:15184081
INFLAMMATION of the PANCREAS. Pancreatitis is classified as acute unless there are computed tomographic or endoscopic retrograde cholangiopancreatographic findings of CHRONIC PANCREATITIS (International Symposium on Acute Pancreatitis, Atlanta, 1992). The two most common forms of acute pancreatitis are ALCOHOLIC PANCREATITIS and gallstone pancreatitis.
The largest of the three paired salivary glands, located in front of the ear.
Jie Zheng
NCIt:C12427
Tomasz Adamusiak
The largest of the three paired salivary glands, located in front of the ear.[accessedResource: NCIt:C12427][accessDate: 04-11-2010]
Parotid[accessedResource: NCIt:C12427][accessDate: 04-11-2010]
parotid gland
Parotid
James Malone
Wistar-Kyoto
RGD:1359002
dorEcP2[accessedResource: FBbt:00005527][accessDate: 04-11-2010]
FBbt:00005527
dorEcP2
dorsal ectodermal primordium
dorsal ectodermal primordium[accessedResource: FBbt:00005527][accessDate: 04-11-2010]
dorsal ectoderm primordium
James Malone
1.9
true
bronchial epithelial
compound term epithelial cell + lung
CL:0000082
bronchial epithelial cells
James Malone
alveolar epithelial type II
alveolar epithelial type I
obsolete_epithelial cell of lung
bronchoalveolar lavage cell
Tomasz Adamusiak
presumptive ectoderm
ZFA:0001376
mass spectrometry assay
Ele Holloway
James Malone
SKNFI
Ele Holloway
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0002737
neuropeptide S
CHEBI:53461
A morphology quality inhering in a bearer by virtue of the bearer's physical magnitude.[accessedResource: PATO:0000117][accessDate: 04-11-2010]
James Malone
A morphology quality inhering in a bearer by virtue of the bearer's physical magnitude.
Size is a morphology quality which describes a material entity's physical magnitude.
size
PATO:0000117
Tomasz Adamusiak
rhombomere 8
ZFA:0000153
Ele Holloway
James Malone
A CADO ES1 is a cell line.
A CADO ES1 is both something that is bearer of a 39 s sarcoma, and something that derives from Homo sapiens.
CADO ES1
Tomasz Adamusiak
opercular lateral line neuromast
ZFA:0000814
James Malone
The antibody used to precipitate an antigen out of a solution during the process of immunoprecipitation.
immunoprecipitate
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001682
A temperature unit is a base unit which is a standard measure of the average kinetic energy of the particles in a sample of matter.
A base unit which is a standard measure of the average kinetic energy of the particles in a sample of matter.
Jie Zheng
temperature unit
true
James Malone
MO_48
Ele Holloway
James Malone
raphe magnus
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#organism_part_comparison_design[accessedResource: MO_953][accessDate: 04-11-2010]
Tomasz Adamusiak
organism part comparison design
MO_953
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#organism_part_comparison_design
cingulate cortex
cingulate cortex homogenate
James Malone
NIFSTD:birnlex_934
NCIt:C52713
Tomasz Adamusiak
Tomasz Adamusiak
ventral ectoderm anlage
FBbt:00004204
James Malone
glutamatergic neuron
CL:0000679
Extreme form of obesity where body bass index is 40 or more, which is roughly equivalent to 100 pounds or more over ideal body weight.[accessedResource: NIFSTD:nlx_dys_20090303][accessDate: 04-11-2010]
GeneRIF:12148087
GeneRIF:14764818
GeneRIF:16160866
GeneRIF:12822042
ICD9:278.01
Severe obesity[accessedResource: DOID:11981][accessDate: 04-11-2010]
Morbid Obesities[accessedResource: MSH:D009767][accessDate: 04-11-2010]
morbid obesity
GeneRIF:15235769
GeneRIF:12032749
Morbid obesity (disorder)[accessedResource: DOID:11981][accessDate: 04-11-2010]
GeneRIF:15002062
The condition of weighing two, three, or more times the ideal weight, so called because it is associated with many serious and life-threatening disorders. In the BODY MASS INDEX, morbid obesity is defined as having a BMI greater than 40.0 kg/m2.
Obesity[accessedResource: NIFSTD:nlx_dys_20090303][accessDate: 04-11-2010]
NIFSTD:nlx_dys_20090303
Morbid obesity (disorder)
Severe obesity
morbid[accessedResource: NIFSTD:nlx_dys_20090303][accessDate: 04-11-2010]
MSH:D009767
GeneRIF:16253647
morbid
Extreme form of obesity where body bass index is 40 or more, which is roughly equivalent to 100 pounds or more over ideal body weight.
GeneRIF:14763917
SNOMEDCT:238136002
The condition of weighing two, three, or more times the ideal weight, so called because it is associated with many serious and life-threatening disorders. In the BODY MASS INDEX, morbid obesity is defined as having a BMI greater than 40.0 kg/m2.[accessedResource: MSH:D009767][accessDate: 04-11-2010]
Tomasz Adamusiak
James Malone
GeneRIF:12647279
GeneRIF:15919838
Obesity
GeneRIF:12883487
Morbid Obesities
GeneRIF:12870165
GeneRIF:12032643
DOID:11981
CL:0000129
A central nervous system macrophage found in the parenchyma of the central nervous system. Marker include CD11b-positive, F4/80-positive, and CD68-positive.[accessedResource: CL:0000129][accessDate: 04-11-2010]
microglia
MERGED DEFINITION:nTARGET DEFINITION: The small, non-neural, interstitial cells of mesodermal origin that form part of the supporting structure of the central nervous system. They are of various forms and may have slender branched processes. They are migratory and act as phagocytes to waste products of nerve tissue. n--------------------nSOURCE DEFINITION: One of the small interstitial phagocytic cells of the microglia.
mixed glial cells (predominantly microglia)
NIFSTD:sao789292116
A small, migratory, phagocytic, interstitial cell of hematopoietic origin found in the central nervous system. Microglial cells are of various forms and may have slender branched processes.
microglia[accessedResource: NIFSTD:sao789292116][accessDate: 04-11-2010]
James Malone
microglial cell
microgliocyte[accessedResource: BTO:0000078][accessDate: 04-11-2010]
MERGED DEFINITION:nTARGET DEFINITION: The small, non-neural, interstitial cells of mesodermal origin that form part of the supporting structure of the central nervous system. They are of various forms and may have slender branched processes. They are migratory and act as phagocytes to waste products of nerve tissue. n--------------------nSOURCE DEFINITION: One of the small interstitial phagocytic cells of the microglia.[accessedResource: BTO:0000078][accessDate: 04-11-2010]
BTO:0000078
Tomasz Adamusiak
Hortega cell
microgliocyte
Hortega cell[accessedResource: BTO:0000078][accessDate: 04-11-2010]
A central nervous system macrophage found in the parenchyma of the central nervous system. Marker include CD11b-positive, F4/80-positive, and CD68-positive.
A small, migratory, phagocytic, interstitial cell of hematopoietic origin found in the central nervous system. Microglial cells are of various forms and may have slender branched processes.[accessedResource: NIFSTD:sao789292116][accessDate: 04-11-2010]
A central nervous system macrophage found in the parenchyma of the central nervous system.
olanzapinum
olanzapine
olanzapina
A benzodiazepine that has formula C17H20N4S.
2-methyl-4-(4-methylpiperazin-1-yl)-10H-thieno[2,3-b][1,5]benzodiazepine
InChIKey=KVWDHTXUZHCGIO-UHFFFAOYAQ
InChI=1/C17H20N4S/c1-12-11-13-16(21-9-7-20(2)8-10-21)18-14-5-3-4-6-15(14)19-17(13)22-12/h3-6,11,19H,7-10H2,1-2H3
C17H20N4S
CN1CCN(CC1)C2=Nc3ccccc3Nc4sc(C)cc24
James Malone
Zyprexa
James Malone
embryonic frontal ganglion
FBbt:00005668
Ele Holloway
James Malone
NCI-H1975
James Malone
CS57625 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158649&type=germplasm
CS57625
http://www.arabidopsis.org/servlets/TairObject?id=1005158649&type=germplasm
James Malone
CS57848 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158872&type=germplasm
CS57848
http://www.arabidopsis.org/servlets/TairObject?id=1005158872&type=germplasm
apoplast[accessedResource: MAT:0000348][accessDate: 04-11-2010]
MAT:0000348
apoplast
apoplasm
The fluid between the cell wall and the plasma membrane[accessedResource: MAT:0000348][accessDate: 04-11-2010]
The fluid between the cell wall and the plasma membrane
James Malone
developmental structure
James Malone
BTO:0000174
An anatomical structure that exists only before the organism is fully formed. In mammals, for example, a structure that exists only prior to the birth of the organism. This structure may be normal or abnormal.
An anatomical structure that exists only before the organism is fully formed. In mammals, for example, a structure that exists only prior to the birth of the organism. This structure may be normal or abnormal.[accessedResource: BTO:0000174][accessDate: 04-11-2010]
embryonic structure
An embryonic specific part is an organism part which is specific to embryos.
An ab2.2 is a cell line.
An ab2.2 is both something that derives from a mus musculus, and something that derives from an embryonic stem cell.
Ele Holloway
Natural Language Generator 8th April 2010
AB2.2
James Malone
James Malone
exposure to cigarette smoke
The act of subjecting someone or something to an influencing experience. E.g. exposure to cigarette smoke
exposure
chloroquine
20446
40446
54-05-7
C18H26ClN3
N4-(7-chloroquinolin-4-yl)-N1,N1-diethylpentane-1,4-diamine
Tomasz Adamusiak
Drosophila developmental tissue
James Malone
http://www.ebi.ac.uk/efo/EFO_0002651
Pan troglodytes
Common Chimpanzee
Jie Zheng
Tomasz Adamusiak
C57BL/6 congenically expressing H2g7 mouse strain.
B6.H2_g7
PMID:15356126
Gastrointestinal Stromal Tumors
All tumors in the GASTROINTESTINAL TRACT arising from mesenchymal cells (MESODERM) except those of smooth muscle cells (LEIOMYOMA) or Schwann cells (SCHWANNOMA).[accessedResource: MSH:D046152][accessDate: 04-11-2010]
Stromal Neoplasms, Gastrointestinal
GIST
gastrointestinal stromal tumor
GANT[accessedResource: DOID:9253][accessDate: 04-11-2010]
Stromal tumor of Gastrointestinal tract
Stromal Neoplasm, Gastrointestinal
MSH:D046152
GIST[accessedResource: DOID:9253][accessDate: 04-11-2010]
Neoplasm, Gastrointestinal Stromal[accessedResource: MSH:D046152][accessDate: 04-11-2010]
GANT
James Malone
Stromal Tumors, Gastrointestinal[accessedResource: MSH:D046152][accessDate: 04-11-2010]
Stromal tumor of gastrointestinal tract[accessedResource: DOID:9253][accessDate: 04-11-2010]
All tumors in the GASTROINTESTINAL TRACT arising from mesenchymal cells (MESODERM) except those of smooth muscle cells (LEIOMYOMA) or Schwann cells (SCHWANNOMA).
DOID:9253
Neoplasms, Gastrointestinal Stromal[accessedResource: MSH:D046152][accessDate: 04-11-2010]
James Malone
NIFSTD:birnlex_2110
Jie Zheng
antibodies
antibody
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#antibody
Tomasz Adamusiak
An antibody function (or antigen binding function) is an infection-fighting protein molecule in blood or secretory fluids that tags, neutralizes, and helps destroy pathogenic microorganisms such as bacteria, viruses and toxins.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#antibody[accessedResource: MO_833][accessDate: 04-11-2010]
antibodies[accessedResource: NIFSTD:birnlex_2110][accessDate: 04-11-2010]
MO_833
James Malone
GM12057
James Malone
stage II endometrioid carcinoma
STRUCTURE_Formula:C21H32N2O5
CASRN:157798-12-4
DSSTox_CID:22585
James Malone
Ele Holloway
STRUCTURE_ChemicalName_IUPAC:2-[5-(nonyloxy)-1H-indol-3-yl]ethanamine ethanedioate
DSSTox_Generic_SID:42585
Tomasz Adamusiak
5-nonyloxytryptamine oxalate
James Malone
true
gram per meter squared
g/m^2
gram per metre squared
gram per square meter
http://www.ebi.ac.uk/efo/EFO_0002604
Any substance which when absorbed into a living organism may modify one or more of its functions. The term is generally accepted for a substance taken for a therapeutic purpose, but is also commonly used for abused substances.
drug
drugs
medicine
Ele Holloway
James Malone
647V
STRUCTURE_Formula:C12H10O4
2,3-dimethoxy-1,4-naphthoquinone
Ele Holloway
DSSTox_Generic_SID:40935
STRUCTURE_ChemicalName_IUPAC:2,3-dimethoxynaphthalene-1,4-dione
CASRN:6956-96-3
DSSTox_CID:20935
James Malone
DMNQ
Tomasz Adamusiak
Temporal cortex
BTO:0001355
One of the two parietal lobes of the brain located behind the frontal lobe at the top of the brain. Parietal Lobe, Right - Damage to this area can cause visuo-spatial deficits (e.g., the patient may have difficulty finding their way around new, or even familiar, places). Parietal Lobe, Left - Damage to this area may disrupt a patient's ability to understand spoken and/or written language. The parietal lobes contain the primary sensory cortex which controls sensation (touch, pressure). Behind the primary sensory cortex is a large association area that controls fine sensation (judgment of texture, weight, size, shape).[accessedResource: BTO:0001355][accessDate: 04-11-2010]
MAT:0000508
FMAID:61825
Temporal lobe is the ventrolateral lobe of five lobes comprising each cerebral hemisphere. It is bounded dorsally by the lateral fissure and posteriorly by an arbitrary border shared with the occipital lobe.
temporal lobe
James Malone
temporal cortex[accessedResource: BTO:0001355][accessDate: 04-11-2010]
EV:0100169
EMAPA:18797
One of the two parietal lobes of the brain located behind the frontal lobe at the top of the brain. Parietal Lobe, Right - Damage to this area can cause visuo-spatial deficits (e.g., the patient may have difficulty finding their way around new, or even familiar, places). Parietal Lobe, Left - Damage to this area may disrupt a patient's ability to understand spoken and/or written language. The parietal lobes contain the primary sensory cortex which controls sensation (touch, pressure). Behind the primary sensory cortex is a large association area that controls fine sensation (judgment of texture, weight, size, shape).
James Malone
larval day 5
ZFS:0000037
Tomasz Adamusiak
CASRN:71675-85-9
amisulpride
DSSTox_CID:22613
James Malone
STRUCTURE_Formula:C17H27N3O4S
DSSTox_Generic_SID:42613
STRUCTURE_ChemicalName_IUPAC:4-amino-N-[(1-ethylpyrrolidin-2-yl)methyl]-5-(ethylsulfonyl)-2-methoxybenzamide
Ele Holloway
Mural Cell
CL:0000669
adventitial cell
NIFSTD:nifext_171
adventitial cell[accessedResource: CL:0000669][accessDate: 04-11-2010]
Cell of Rouget
Tomasz Adamusiak
*Slender, contractile, mesenchymal-like cell found in close association with capillary walls. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells. (From OBO Cell Type Ontology).
*A flattened, or elongated, stellate-shaped solitary cell with multiple cytoplasmic processes encircling the capillary endothelium and contacting a large abluminal vessel area. It may be equivalent to the vascular smooth muscle cell, although this identify has not been conclusively determined yet (Armulik et al., Circ Res 97: 512, 2005).[accessedResource: NIFSTD:nifext_171][accessDate: 04-11-2010]
Cell of Rouget[accessedResource: CL:0000184][accessDate: 04-11-2010]
pericyte
pericyte cell[accessedResource: CL:0000669][accessDate: 04-11-2010]
A slender, contractile, mesenchymal-like cell found in close association with capillary walls. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells. (From Stedman, 26th ed).
Mural Cell[accessedResource: NIFSTD:nifext_171][accessDate: 04-11-2010]
Rouget Cell
pericyte cell
Pericyte of Rouget[accessedResource: CL:0000669][accessDate: 04-11-2010]
An elongated, contractile cell found wrapped about precapillary arterioles outside the basement membrane. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells.[accessedResource: CL:0000669][accessDate: 04-11-2010]
CL:0000184
Rouget Cell[accessedResource: NIFSTD:nifext_171][accessDate: 04-11-2010]
An elongated, contractile cell found wrapped about precapillary arterioles outside the basement membrane. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells.
adventitial reticular cell
adventitial reticular cell[accessedResource: CL:0000669][accessDate: 04-11-2010]
Pericyte of Rouget
*Slender, contractile, mesenchymal-like cell found in close association with capillary walls. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells. (From OBO Cell Type Ontology).
*A flattened, or elongated, stellate-shaped solitary cell with multiple cytoplasmic processes encircling the capillary endothelium and contacting a large abluminal vessel area. It may be equivalent to the vascular smooth muscle cell, although this identify has not been conclusively determined yet (Armulik et al., Circ Res 97: 512, 2005).
http://www.ebi.ac.uk/efo/EFO_0002732
N-Monomethylformamide
HCONHCH3
NMF
Monomethylformamide
Tomasz Adamusiak
InChI=1/C2H5NO/c1-3-2-4/h2H,1H3,(H,3,4)/f/h3H
InChIKey=ATHHXGZTWNVVOU-TULZNQERCH
C2H5NO
N-Methyl-formamide
N-methylformamide
A formamide compound having an N-methyl substituent.
Ele Holloway
CHEBI:7438
[H]C(=O)NC
Methylformamide
Tomasz Adamusiak
forerunner cell group
ZFA:0000023
OntologyMappingImporter following MAT:0000221
MAT:0000221
James Malone
ZEA:0015158
PO:0006308
lateral root meristem
ConcentrationUnitOther[accessedResource: MO_86][accessDate: 04-11-2010]
concentration unit
MO_86
Jie Zheng
ConcentrationUnitOther
A derived unit which represents a standard measurement of how much of a given substance there is mixed with another substance.
A concentration unit is a dervied unit which represents a standard measurement of how much of a given substance there is mixed with another substance.
true
James Malone
Tomasz Adamusiak
MO_61
http://www.ebi.ac.uk/efo/EFO_0001803
CHEBI:50504
James Malone
http://www.ebi.ac.uk/efo/EFO_0001888
Compound that increase urine volume by increasing the amount of osmotically active solute in the urine. It also increases the osmolarity of plasma.
osmotic diuretic
Carcinoma, predominantly squamous cell, arising from epithelial cells of the hypopharynx
hypopharyngeal carcinoma
cancer of Hypopharynx
carcinoma of the hypopharynx
Ele Holloway
James Malone
A normal pancreas cell line.
KIF5
Bacteremia (disorder)[accessedResource: DOID:2294][accessDate: 04-11-2010]
Bacteremia (disorder)
Bacteremia, NOS[accessedResource: DOID:2294][accessDate: 04-11-2010]
Unspecified bacteremia
Bacteremia NOS (disorder)
Unspecified bacteraemia[accessedResource: DOID:2294][accessDate: 04-11-2010]
cellulitis
bacteremia[accessedResource: DOID:2294][accessDate: 04-11-2010]
Unspecified bacteremia (context-dependent category)
Unspecified bacteraemia
Unspecified bacteremia[accessedResource: DOID:2294][accessDate: 04-11-2010]
DOID:2294
Bacteremia NOS (disorder)[accessedResource: DOID:2294][accessDate: 04-11-2010]
Bacteremia, NOS
Unspecified bacteremia (context-dependent category)[accessedResource: DOID:2294][accessDate: 04-11-2010]
Tomasz Adamusiak
bacteremia
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#clinical_history_design[accessedResource: MO_832][accessDate: 04-11-2010]
Tomasz Adamusiak
clinical history design
MO_832
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#clinical_history_design
Tomasz Adamusiak
vagal placode 4
ZFA:0001300
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#self_vs_self_design[accessedResource: MO_490][accessDate: 04-11-2010]
Tomasz Adamusiak
self vs self design
MO_490
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#self_vs_self_design
Helen Parkinson
experimental cell is a cell which is experimentally derived such as a cell line cell, or a cell differentiated in culture
experimental cell
ll[accessedResource: ZFA:0000034][accessDate: 04-11-2010]
sensory systems
a line of neuroblasts along the sides of fish and amphibia that detect vibrations and pressure changes
XAO:0000095
MAT:0000249
sensory system
AAO:0000269
a line of neuroblasts along the sides of fish and amphibia that detect vibrations and pressure changes[accessedResource: MAT:0000249][accessDate: 04-11-2010]
A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.)
MFO:0003620
A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.)[accessedResource: ZFA:0000034][accessDate: 04-11-2010]
ZFA:0000034
sensory system[accessedResource: TAO:0000282][accessDate: 04-11-2010]
sensory systems[accessedResource: TAO:0000282][accessDate: 04-11-2010]
James Malone
ll
lateral line system
TAO:0000282
James Malone
HCC1187
James Malone
http://www.ebi.ac.uk/efo/EFO_0001681
true
A base unit which is a standard measure of the flow of electric charge.
An electric current unit is a base unit which is a standard measure of the flow of electric charge.
electric current unit
UO:0000004
James Malone
U937
umbilical cord blood
Cord Blood[accessedResource: NCIt:C13300][accessDate: 04-11-2010]
Blood present in the umbilical vessels at the time of delivery. If cryopreserved at birth, cord blood can serve as a source of autologous lymphocytes for transplantation to a patient later diagnosed and treated for leukemia or lymphoma.
Cord Blood
James Malone
Blood present in the umbilical vessels at the time of delivery. If cryopreserved at birth, cord blood can serve as a source of autologous lymphocytes for transplantation to a patient later diagnosed and treated for leukemia or lymphoma.[accessedResource: NCIt:C13300][accessDate: 04-11-2010]
NCIt:C13300
A non-Hodgkin lymphoma characterized by a diffuse proliferation of predominantly large neoplastic B lymphocytes. It is the most frequently seen type of non-Hodgkin lymphoma, representing 30%-40% of the cases. Morphologic variants include centroblastic lymphoma, immunoblastic lymphoma, and anaplastic lymphoma. Subtypes/entities include T-cell/histiocyte rich large B-cell lymphoma, primary diffuse large B-cell lymphoma of the central nervous system, plasmablastic lymphoma, primary cutaneous diffuse large B-cell lymphoma, leg type, and ALK-positive large B-cell lymphoma.
DLBCL[accessedResource: NCIt:C8851][accessDate: 04-11-2010]
Tomasz Adamusiak
A non-Hodgkin lymphoma characterized by a diffuse proliferation of predominantly large neoplastic B lymphocytes. It is the most frequently seen type of non-Hodgkin lymphoma, representing 30%-40% of the cases. Morphologic variants include centroblastic lymphoma, immunoblastic lymphoma, and anaplastic lymphoma. Subtypes/entities include T-cell/histiocyte rich large B-cell lymphoma, primary diffuse large B-cell lymphoma of the central nervous system, plasmablastic lymphoma, primary cutaneous diffuse large B-cell lymphoma, leg type, and ALK-positive large B-cell lymphoma.[accessedResource: NCIt:C8851][accessDate: 04-11-2010]
DLBCL
NCIt:C8851
diffuse large B-cell lymphoma
CTLL-2 cell
Mouse, C57BL/6, T-lymphocyte cell line.
CTLL-2 cell[accessedResource: BTO:0001482][accessDate: 04-11-2010]
CTLL-2
Ele Holloway
James Malone
Mouse, C57BL/6, T-lymphocyte cell line.[accessedResource: BTO:0001482][accessDate: 04-11-2010]
BTO:0001482
ganglioglioma, no ICD-O subtype[accessedResource: DOID:5078][accessDate: 04-11-2010]
Tomasz Adamusiak
ganglioglioma
DOID:5078
ganglioglioma, no ICD-O subtype
brown adipose tissue[accessedResource: BTO:0000156][accessDate: 04-11-2010]
A mammalian heat-producing tissue occurring especially in human newborns and in hibernators.
James Malone
A mammalian heat-producing tissue occurring especially in human newborns and in hibernators.[accessedResource: BTO:0000156][accessDate: 04-11-2010]
Adipose Tissue - Brown (MMHCC)
brown adipose tissue
Adipose Tissue - Brown (MMHCC)[accessedResource: NCIt:C22704][accessDate: 04-11-2010]
NCIt:C22704
BTO:0000156
MA:0000057
brown fat
MAT:0000198
http://www.ebi.ac.uk/efo/EFO_0002681
Xyl
InChI=1/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h1,3-5,7-10H,2H2/t3-,4+,5+/m0/s1
xylose
xylo-pentose
An aldopentose, found in the embryos of most edible plants and used in medicine to test for malabsorption by administration in water to the patient.
InChIKey=PYMYPHUHKUWMLA-VPENINKCBR
C5H10O5
OC[C@@H](O)[C@H](O)[C@@H](O)C=O
CHEBI:18222
James Malone
GM12716
Ele Holloway
James Malone
SNU5
pancreatic endocrine progenitor
Jie Zheng
http://en.wikipedia.org/wiki/Pancreas
pancreatic endocrine progenitor[accessedResource: CL:0002351][accessDate: 04-11-2010]
CL:0002351
A multi-fate stem cell that is able to differentiate into the pancreas alpha, beta and delta endocrine cells. This cell type expresses neurogenin-3 and Isl-1.
pancreatic islet progenitor cell
progenitor cell of endocrine pancreas
Tomasz Adamusiak
pancreatic islet progenitor cell[accessedResource: CL:0002351][accessDate: 04-11-2010]
A multi-fate stem cell that is able to differentiate into the pancreas alpha, beta and delta endocrine cells. This cell type expresses neurogenin-3 and Isl-1.[accessedResource: CL:0002351][accessDate: 04-11-2010]
6-propyl-2-thiouracil
1209
21209
51-52-5
6-propyl-2-thioxo-2,3-dihydropyrimidin-4(1H)-one
C7H10N2OS
PTU
James Malone
CS57731 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158755&type=germplasm
CS57731
http://www.arabidopsis.org/servlets/TairObject?id=1005158755&type=germplasm
adrenaline
329-65-7
primary cells
Ele Holloway
James Malone
NCI-H1395
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hybridization_station[accessedResource: MO_497][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0002020
An instrument which is used to maintain the temperature of one or more hybridization_chamber(s) at a defined, constant temperature.
hybridization station
MO_497
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hybridization_station
Tomasz Adamusiak
intestinal bulb
ZFA:0001076
smooth muscle fiber
SMC cell[accessedResource: BTO:0001260][accessDate: 04-11-2010]
CL:0000192
smooth muscle cell[accessedResource: CL:0000192][accessDate: 04-11-2010]
MAT:0000303
BTO:0001260
smooth muscle
XAO:0000175
EV:0100378
SMC cell
A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast).[accessedResource: CL:0000192][accessDate: 04-11-2010]
adult visceral muscle[accessedResource: FBbt:00003525][accessDate: 04-11-2010]
non-striated muscle cell
non-striated muscle cell[accessedResource: CL:0000192][accessDate: 04-11-2010]
adult visceral muscle
Tomasz Adamusiak
Muscle tissue that lacks cross striations, that is made up of elongated spindle-shaped cells having a central nucleus, and that is found in vertebrate visceral structures (as the stomach and bladder) as thin sheets performing functions not subject to conscious control by the mind and in all or most of the musculature of invertebrates other than arthropods.[accessedResource: BTO:0001260][accessDate: 04-11-2010]
smooth muscle fiber[accessedResource: CL:0000192][accessDate: 04-11-2010]
SAEL:97
FBbt:00003525
smooth muscle cell
A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast).
James Malone
Muscle tissue that lacks cross striations, that is made up of elongated spindle-shaped cells having a central nucleus, and that is found in vertebrate visceral structures (as the stomach and bladder) as thin sheets performing functions not subject to conscious control by the mind and in all or most of the musculature of invertebrates other than arthropods.
Ele Holloway
James Malone
P3HR1
James Malone
BJABK3
skeletal muscle cell
skeletal muscle
skeletal muscle system
Tomasz Adamusiak
adult somatic muscle[accessedResource: MAT:0000302][accessDate: 04-11-2010]
muscle organ - human[accessedResource: MAT:0000302][accessDate: 04-11-2010]
Muscle organ[accessedResource: FMAID:5022][accessDate: 04-11-2010]
A usually voluntary muscle made up of elongated, multinucleated, transversely striated muscle fibers, having principally bony attachments.
MAT:0000302
CL:0000188
James Malone
BFBbt:00003259
muscle organ - human
Striated muscle cell which has as its direct parts two or more peripherally located nuclei.[accessedResource: CL:0000188][accessDate: 04-11-2010]
skeletal muscle system[accessedResource: MAT:0000302][accessDate: 04-11-2010]
XAO:0000174
Striated muscle cell which has as its direct parts two or more peripherally located nuclei.
BTO:0001103
adult somatic muscle
striated muscle[accessedResource: BTO:0001103][accessDate: 04-11-2010]
EV:0100377
Skeletal muscle fiber
skeletal muscle cell[accessedResource: BTO:0001103][accessDate: 04-11-2010]
EHDAA:5031
SAEL:94
striated muscle
Nonparenchymatous organ that primarily consists of skeletal muscle tissue aggregated into macroscopic fasciculi by connective tissue; together with other muscles, it constitutes the muscular system. Examples: biceps, diaphragm, masseter, right third external intercostal muscle, external oblique, levator ani, serratus anterior.
striated muscle cell
Skeletal muscle fiber[accessedResource: CL:0000188][accessDate: 04-11-2010]
FMAID:5022
EMAPA:17745
A usually voluntary muscle made up of elongated, multinucleated, transversely striated muscle fibers, having principally bony attachments.[accessedResource: BTO:0001103][accessDate: 04-11-2010]
Muscle organ
Tomasz Adamusiak
fat body primordium
FBbt:00005067
Other atopic dermatitis and related conditions
Atopic dermatitis and related conditions (disorder)[accessedResource: SNOMEDCT:200769008][accessDate: 04-11-2010]
DOID:2771
atopic dermatitis and related conditions
James Malone
OTHER ATOPIC DERMATITIS[accessedResource: ICD9:691.8][accessDate: 04-11-2010]
Atopic dermatitis and related conditions (disorder)
Other atopic dermatitis and related conditions[accessedResource: ICD9:691.8][accessDate: 04-11-2010]
atopic eczema
ICD9:691.8
OTHER ATOPIC DERMATITIS
Atopic dermatitis and related conditions[accessedResource: ICD9:691][accessDate: 04-11-2010]
ICD9:691
SNOMEDCT:200769008
Pituitary gland[accessedResource: FMAID:13889][accessDate: 04-11-2010]
A compound organ which is an endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin.[accessedResource: ZFA:0000118][accessDate: 04-11-2010]
SAEL:83
hypophysis
EMAPA:16724
A small oval endocrine organ that is attached to the infundibulum of the brain, consists of an epithelial anterior lobe joined by an intermediate part to a posterior lobe of nervous origin, and produces various internal secretions directly or indirectly impinging on most basic body functions.
Hypophysis cerebri
EV:0100132
EHDAA:2183
FMAID:13889
Pituitary gland
MA:0000127
MAT:0000077
A small oval endocrine organ that is attached to the infundibulum of the brain, consists of an epithelial anterior lobe joined by an intermediate part to a posterior lobe of nervous origin, and produces various internal secretions directly or indirectly impinging on most basic body functions.[accessedResource: BTO:0001073][accessDate: 04-11-2010]
BTO:0001073
Hypophysis cerebri[accessedResource: FMAID:13889][accessDate: 04-11-2010]
hypophysis[accessedResource: MAT:0000077][accessDate: 04-11-2010]
James Malone
pituitary body[accessedResource: BTO:0001073][accessDate: 04-11-2010]
pituitary body
A compound organ which is an endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin.
XAO:0000161
ZFA:0000118
pituitary
vulvar carcinoma
James Malone
CS57842 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158866&type=germplasm
CS57842
http://www.arabidopsis.org/servlets/TairObject?id=1005158866&type=germplasm
Ele Holloway
James Malone
B140P
James Malone
CS57699 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158723&type=germplasm
CS57699
http://www.arabidopsis.org/servlets/TairObject?id=1005158723&type=germplasm
Ele Holloway
James Malone
SR
Core region of nucleus accumbens[accessedResource: FMAID:77383][accessDate: 04-11-2010]
Tomasz Adamusiak
nucleus accumbens core
FMAID:77383
birn_anat:nlx_anat_20090306
Core region of nucleus accumbens
Jie Zheng
Tomasz Adamusiak
Tests and results for pathogens infecting organism from which the biosource is derived
pathogen test
MO_184
PO:0009005
root
MAT:0000005
GRO:0005338
GRO:0005338[accessedResource: BTO:0001188][accessDate: 04-11-2010]
James Malone
BTO:0001188
The usually underground part of a seed plant body that originates usually from the hypocotyl, functions as an organ of absorption, aeration, and food storage or as a means of anchorage and support, and differs from a stem especially in lacking nodes, buds, and leaves.[accessedResource: BTO:0001188][accessDate: 04-11-2010]
ZEA:0015034
The usually underground part of a seed plant body that originates usually from the hypocotyl, functions as an organ of absorption, aeration, and food storage or as a means of anchorage and support, and differs from a stem especially in lacking nodes, buds, and leaves.
STRUCTURE_Formula:1-methyl-4-[8-(methylsulfanyl)-10,11-dihydrodibenzo[b,f]thiepin-10-yl]piperazine (2Z)-but-2-enedioate
James Malone
Ele Holloway
methiothepin maleate
DSSTox_Generic_SID:C24H28N2O4S2
CASRN:19728-88-2
Tomasz Adamusiak
DSSTox_CID:42630
Ele Holloway
James Malone
HDMYZ
Theiler Stage 11a[accessedResource: birnlex_7062][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
Theiler stage 11
birnlex_7062
Theiler Stage 11a
STRUCTURE_ChemicalName_IUPAC:3-(1H-imidazol-5-yl)propyl N-(4-chlorobenzyl)imidothiocarbamate dihydrobromide
Ele Holloway
James Malone
DSSTox_Generic_SID:42610
Tomasz Adamusiak
DSSTox_CID:22610
STRUCTURE_Formula:C14H19Br2ClN4S
VUF9153; N-(4-chlorobenzyl)-S-[3-(4(5)-imidazolyl)propyl]isothio urea dihydrobromide
CASRN:145231-35-2
clobenpropit dihydrobromide
GeneRIF:12427560
GeneRIF:12209584
2.6.1
GeneRIF:12697807
GeneRIF:14533006
Use http://www.ebi.ac.uk/efo/EFO_0000365 colorectal adenocarcinoma
GeneRIF:15942645
GeneRIF:12210751
GeneRIF:15259074
GeneRIF:12151344
Carcinoma of the Colon[accessedResource: NCIt:C4910][accessDate: 10-05-2010]
carcinoma of colon (disorder)[accessedResource: DOID:1520][accessDate: 10-05-2010]
GeneRIF:14500642
GeneRIF:12517779
GeneRIF:15454490
GeneRIF:12185585
Colonic carcinoma
GeneRIF:16199102
Carcinoma of the Colon
GeneRIF:12030384
James Malone
GeneRIF:12189558
GeneRIF:12820726
GeneRIF:14715257
Colon Cancer
carcinoma of colon (disorder)
GeneRIF:14707484
GeneRIF:16164044
GeneRIF:11819805
GeneRIF:12664617
DOID:1520
obsolete_colon carcinoma
GeneRIF:14566823
GeneRIF:16192633
GeneRIF:12090473
NCIt:C4910
SNOMEDCT:269533000
GeneRIF:12149254
GeneRIF:14581351
GeneRIF:15688023
GeneRIF:15750621
GeneRIF:12515621
GeneRIF:16278666
GeneRIF:11920461
GeneRIF:12847090
Carcinoma of colon[accessedResource: SNOMEDCT:269533000][accessDate: 10-05-2010]
GeneRIF:12957362
A malignant tumor usually arising from the epithelium lining the large intestinal mucosa. Colon carcinoma is one of the most common malignancies in both males and females, and is especially common in North America and Europe. Grossly, most colon carcinomas are polypoid or ulcerating lesions. Microscopically, adenocarcinoma is the most frequently seen morphologic subtype. Prognosis depends on the stage of the disease (depth of invasion, metastasis to regional/distal lymph nodes or other anatomic sites). -- 2004
GeneRIF:12466967
GeneRIF:15637741
GeneRIF:15655830
true
A malignant tumor usually arising from the epithelium lining the large intestinal mucosa. Colon carcinoma is one of the most common malignancies in both males and females, and is especially common in North America and Europe. Grossly, most colon carcinomas are polypoid or ulcerating lesions. Microscopically, adenocarcinoma is the most frequently seen morphologic subtype. Prognosis depends on the stage of the disease (depth of invasion, metastasis to regional/distal lymph nodes or other anatomic sites). -- 2004[accessedResource: NCIt:C4910][accessDate: 10-05-2010]
GeneRIF:15559761
Carcinoma of colon
GeneRIF:11731434
GeneRIF:12670495
GeneRIF:12055189
Colonic carcinoma[accessedResource: DOID:1520][accessDate: 10-05-2010]
GeneRIF:15492751
Colon Cancer[accessedResource: NCIt:C4910][accessDate: 10-05-2010]
GeneRIF:15632146
GeneRIF:14691449
GeneRIF:15480430
Tomasz Adamusiak
marginal blastomere
ZFA:0000541
Ele Holloway
James Malone
C4I
stria vascularis
BTO:0001819
stria vascularis ductus cochlearis[accessedResource: BTO:0001819][accessDate: 04-11-2010]
James Malone
NIFSTD:birnlex_2525
stria vascularis ductus cochlearis
vascular stria of cochlear duct
The upper part of the spiral ligament of the scala media that contains numerous small blood vessels;nA layer of vascular tissue consisting of epithelial cells, mesothelial cells, and probably some neuroectoderm; it covers the outer wall of the cochlear duct and is thought to secrete the endolymph.
vascular stria of cochlear duct[accessedResource: BTO:0001819][accessDate: 04-11-2010]
Tomasz Adamusiak
The upper part of the spiral ligament of the scala media that contains numerous small blood vessels;nA layer of vascular tissue consisting of epithelial cells, mesothelial cells, and probably some neuroectoderm; it covers the outer wall of the cochlear duct and is thought to secrete the endolymph.[accessedResource: BTO:0001819][accessDate: 04-11-2010]
A stria vascularis is part of a cochlea and is the upper part of the spiral ligament of thescala media that contains numerous small blood vessels.
NCI Metathesaurus: C0038445
GeneRIF:12032748
GeneRIF:12582011
Obesity, unspecified
GeneRIF:11896485
GeneRIF:12601637
GeneRIF:12133430
GeneRIF:15770500
GeneRIF:12050272
GeneRIF:15811564
GeneRIF:9205417
GeneRIF:15867334
GeneRIF:15198934
GeneRIF:14970363
GeneRIF:12603007
GeneRIF:14504270
GeneRIF:12540594
GeneRIF:15781751
GeneRIF:12006640
GeneRIF:11816701
GeneRIF:12855749
GeneRIF:15946750
GeneRIF:16222047
GeneRIF:11956156
GeneRIF:15735230
GeneRIF:15191885
GeneRIF:12364457
GeneRIF:11739396
GeneRIF:15576462
A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY).[accessedResource: MSH:D009765][accessDate: 04-11-2010]
GeneRIF:15845623
GeneRIF:15959417
GeneRIF:15277448
GeneRIF:15063799
GeneRIF:14671185
GeneRIF:15467829
GeneRIF:15070774
GeneRIF:14657411
GeneRIF:14701677
GeneRIF:16054046
GeneRIF:12915696
GeneRIF:12765952
GeneRIF:11996962
GeneRIF:12882938
GeneRIF:15550470
GeneRIF:15834545
GeneRIF:12788932
GeneRIF:15166310
GeneRIF:12365916
GeneRIF:15042014
GeneRIF:12161541
GeneRIF:15855322
GeneRIF:15823758
GeneRIF:15897474
GeneRIF:12968669
Adiposis[accessedResource: SNOMEDCT:414916001][accessDate: 04-11-2010]
GeneRIF:14642408
GeneRIF:15601967
GeneRIF:15870101
GeneRIF:15983230
GeneRIF:12843170
GeneRIF:12658019
GeneRIF:12161552
GeneRIF:15240652
GeneRIF:15070780
GeneRIF:15601832
GeneRIF:15660115
GeneRIF:13129857
GeneRIF:12690079
Obesity, NOS[accessedResource: DOID:9970][accessDate: 04-11-2010]
GeneRIF:15292348
GeneRIF:12727933
GeneRIF:12855762
GeneRIF:15055256
GeneRIF:12507421
GeneRIF:12734779
GeneRIF:15001632
GeneRIF:12213872
ICD9:278.00
GeneRIF:15522935
GeneRIF:12053815
GeneRIF:12951617
An eating-related disorder in which excess body fat has accumulated to such an extent that health may be negatively affected. It is commonly defined as a body mass index (weight divided by height squared) of 30 kg/m2 or higher.
GeneRIF:12739015
GeneRIF:15616037
GeneRIF:15795809
GeneRIF:12765950
GeneRIF:12552573
GeneRIF:12728641
GeneRIF:11718682
GeneRIF:12910269
GeneRIF:15613432
GeneRIF:12217430
GeneRIF:11822583
GeneRIF:12810555
GeneRIF:15156315
GeneRIF:15890776
GeneRIF:15248831
GeneRIF:12165561
GeneRIF:15331533
GeneRIF:12609752
GeneRIF:16166222
GeneRIF:15292466
GeneRIF:15223990
GeneRIF:12364441
Obesity [Ambiguous]
GeneRIF:12856128
GeneRIF:12364415
GeneRIF:15181040
GeneRIF:15531738
GeneRIF:12490667
GeneRIF:12746327
GeneRIF:15386812
GeneRIF:15972581
GeneRIF:12925701
GeneRIF:12970296
Obese (finding)[accessedResource: DOID:9970][accessDate: 04-11-2010]
GeneRIF:12080444
GeneRIF:12716769
Obesity NOS
GeneRIF:15905321
GeneRIF:12401727
GeneRIF:15292320
GeneRIF:12634439
GeneRIF:12032642
GeneRIF:12079879
GeneRIF:12716767
GeneRIF:15292306
GeneRIF:15778720
GeneRIF:14691540
GeneRIF:14715842
SNOMEDCT:414916001
GeneRIF:15090636
GeneRIF:16123358
GeneRIF:12598526
GeneRIF:15168018
GeneRIF:11916923
GeneRIF:14660566
GeneRIF:15919834
GeneRIF:15009470
GeneRIF:14693721
GeneRIF:12429880
GeneRIF:16102992
GeneRIF:15620432
GeneRIF:12050239
GeneRIF:15944845
GeneRIF:12488352
GeneRIF:15979049
GeneRIF:15070960
GeneRIF:15271881
GeneRIF:15181048
Obese (finding)
GeneRIF:15596147
GeneRIF:14642615
GeneRIF:15292330
GeneRIF:12540600
GeneRIF:12189588
GeneRIF:15570174
GeneRIF:11923308
GeneRIF:15448103
GeneRIF:12101250
Adiposis
GeneRIF:15202783
GeneRIF:15466016
GeneRIF:14739355
GeneRIF:12032637
GeneRIF:12805252
James Malone
GeneRIF:14722031
GeneRIF:15797871
GeneRIF:15653680
GeneRIF:11821707
GeneRIF:15336575
GeneRIF:14726256
GeneRIF:15111524
GeneRIF:14627764
GeneRIF:15024085
GeneRIF:16009937
GeneRIF:12165748
GeneRIF:15298982
GeneRIF:15114524
GeneRIF:16200066
GeneRIF:15994342
GeneRIF:15746153
GeneRIF:15769985
GeneRIF:15220914
GeneRIF:12958061
GeneRIF:12045256
GeneRIF:15518421
Tomasz Adamusiak
obesity
GeneRIF:16167150
GeneRIF:11791158
GeneRIF:15579796
GeneRIF:12488961
GeneRIF:14759071
GeneRIF:15845877
GeneRIF:15520868
GeneRIF:15678704
NIFSTD:nlx_dys_20090302
GeneRIF:12861009
GeneRIF:15331535
GeneRIF:12529499
GeneRIF:12177411
GeneRIF:15087473
GeneRIF:16030156
GeneRIF:15448102
GeneRIF:15126243
GeneRIF:12399252
GeneRIF:16222046
GeneRIF:15315911
GeneRIF:15928242
GeneRIF:14671186
GeneRIF:12860835
GeneRIF:15637293
GeneRIF:12869354
GeneRIF:15220220
GeneRIF:12033496
Overweight and obesity[accessedResource: ICD9:278.0][accessDate: 04-11-2010]
GeneRIF:14673524
GeneRIF:15919838
GeneRIF:15123613
GeneRIF:15337759
GeneRIF:12213908
Obesity (disorder)[accessedResource: SNOMEDCT:414916001][accessDate: 04-11-2010]
GeneRIF:15864530
GeneRIF:12387862
GeneRIF:12824951
GeneRIF:12508940
GeneRIF:12925533
GeneRIF:16048795
GeneRIF:15601970
GeneRIF:15855351
GeneRIF:12466947
GeneRIF:15797955
GeneRIF:14715497
GeneRIF:11882520
GeneRIF:11866034
GeneRIF:11829746
GeneRIF:15533361
GeneRIF:12402973
GeneRIF:12885755
GeneRIF:12376184
GeneRIF:14715869
GeneRIF:15598678
GeneRIF:16204364
GeneRIF:15231997
GeneRIF:12068290
GeneRIF:16005429
GeneRIF:15878965
GeneRIF:15841306
GeneRIF:16054054
GeneRIF:14637275
GeneRIF:14551151
GeneRIF:15057669
GeneRIF:12902351
GeneRIF:12865257
GeneRIF:12409311
GeneRIF:15864349
GeneRIF:15862893
GeneRIF:15220187
GeneRIF:14683458
GeneRIF:15789277
GeneRIF:11941369
GeneRIF:12829631
GeneRIF:15459958
GeneRIF:16288749
GeneRIF:12161058
GeneRIF:11972291
GeneRIF:15037865
GeneRIF:15055467
GeneRIF:14742837
GeneRIF:12436346
GeneRIF:12213871
GeneRIF:14707164
GeneRIF:12193546
GeneRIF:12401709
GeneRIF:12385894
GeneRIF:15070922
GeneRIF:16186414
GeneRIF:15472174
GeneRIF:15076153
GeneRIF:12855752
GeneRIF:15919835
GeneRIF:12791674
GeneRIF:15939106
GeneRIF:15910756
GeneRIF:16249436
GeneRIF:16186392
GeneRIF:15169894
GeneRIF:12767044
GeneRIF:12756299
GeneRIF:12353079
GeneRIF:11890967
GeneRIF:15044674
GeneRIF:15854142
GeneRIF:15798948
GeneRIF:15010337
GeneRIF:15331532
GeneRIF:15355432
GeneRIF:12429873
GeneRIF:12524228
GeneRIF:15936463
GeneRIF:14660752
GeneRIF:12370125
GeneRIF:14682470
GeneRIF:12642576
GeneRIF:15920074
GeneRIF:12093799
GeneRIF:15942768
GeneRIF:15002062
GeneRIF:11739957
GeneRIF:12086946
GeneRIF:15677759
GeneRIF:16180331
GeneRIF:14747283
GeneRIF:15494612
GeneRIF:15208271
GeneRIF:12435081
GeneRIF:15795426
A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY).
GeneRIF:14747205
GeneRIF:15743038
GeneRIF:12730030
GeneRIF:14747301
GeneRIF:15563274
GeneRIF:15297289
GeneRIF:15916056
GeneRIF:12032749
GeneRIF:16186410
An eating-related disorder in which excess body fat has accumulated to such an extent that health may be negatively affected. It is commonly defined as a body mass index (weight divided by height squared) of 30 kg/m2 or higher.[accessedResource: NIFSTD:nlx_dys_20090302][accessDate: 04-11-2010]
GeneRIF:15538935
GeneRIF:15292352
GeneRIF:15685173
GeneRIF:15281018
GeneRIF:12032760
GeneRIF:15063110
GeneRIF:12484512
GeneRIF:12746756
Obese
GeneRIF:14525909
Adiposity
GeneRIF:15340111
GeneRIF:12829658
GeneRIF:12161655
GeneRIF:12429872
GeneRIF:12660883
GeneRIF:15688209
GeneRIF:12865337
GeneRIF:12730403
GeneRIF:15654325
GeneRIF:15181539
GeneRIF:15930442
GeneRIF:12529491
GeneRIF:12634434
GeneRIF:12619866
GeneRIF:15001633
GeneRIF:11738809
SNOMEDCT:414915002
GeneRIF:15919839
GeneRIF:15897480
GeneRIF:12055319
GeneRIF:14764817
GeneRIF:12727947
GeneRIF:15367397
GeneRIF:15533384
GeneRIF:15314024
GeneRIF:12175706
GeneRIF:12083814
GeneRIF:12769595
GeneRIF:12690102
GeneRIF:12519848
GeneRIF:12429884
MSH:D009765
GeneRIF:12869545
GeneRIF:15358131
GeneRIF:15070752
GeneRIF:15472203
GeneRIF:15978107
GeneRIF:12075569
GeneRIF:15382611
GeneRIF:15476445
GeneRIF:16021472
GeneRIF:15855321
GeneRIF:15604363
GeneRIF:15583845
GeneRIF:12750152
GeneRIF:15923630
GeneRIF:15277400
GeneRIF:15193430
GeneRIF:14625134
GeneRIF:12447443
GeneRIF:15254878
GeneRIF:12531492
GeneRIF:11882596
GeneRIF:12949354
Obesity, unspecified[accessedResource: DOID:9970][accessDate: 04-11-2010]
GeneRIF:14693717
Obesity [Ambiguous][accessedResource: DOID:9970][accessDate: 04-11-2010]
GeneRIF:12226142
GeneRIF:14567496
GeneRIF:12213628
GeneRIF:16030142
GeneRIF:15382608
GeneRIF:14663468
GeneRIF:15869602
GeneRIF:14646408
ICD9:278.0
Overweight and obesity
GeneRIF:15292322
GeneRIF:15365617
GeneRIF:12716739
GeneRIF:15731326
GeneRIF:15588160
GeneRIF:16123374
GeneRIF:14600075
GeneRIF:12597523
GeneRIF:14657196
GeneRIF:12037740
GeneRIF:12851317
GeneRIF:16135994
GeneRIF:11872365
GeneRIF:12569166
GeneRIF:15780823
GeneRIF:12923129
GeneRIF:15855349
GeneRIF:15070936
GeneRIF:15070954
GeneRIF:14713387
GeneRIF:12480555
GeneRIF:12805399
GeneRIF:15677498
GeneRIF:12663465
GeneRIF:12145151
GeneRIF:12055326
GeneRIF:12393670
Obese[accessedResource: SNOMEDCT:414915002][accessDate: 04-11-2010]
GeneRIF:15369797
GeneRIF:12529498
GeneRIF:12499395
GeneRIF:15806395
GeneRIF:15500001
GeneRIF:12882843
GeneRIF:15616040
GeneRIF:15941924
GeneRIF:15220189
GeneRIF:16054069
GeneRIF:12160996
GeneRIF:12679463
GeneRIF:12424252
GeneRIF:12519856
GeneRIF:12720538
GeneRIF:12649573
Adiposity[accessedResource: SNOMEDCT:414916001][accessDate: 04-11-2010]
GeneRIF:12530526
GeneRIF:15955385
GeneRIF:11912547
GeneRIF:12960041
GeneRIF:11970899
GeneRIF:16046411
GeneRIF:15314181
GeneRIF:14742836
GeneRIF:15635487
GeneRIF:15625086
GeneRIF:12574803
GeneRIF:15985479
GeneRIF:16092047
GeneRIF:15522943
GeneRIF:12920182
GeneRIF:16123197
GeneRIF:15889232
GeneRIF:12031976
GeneRIF:15323067
GeneRIF:12765968
GeneRIF:12660878
GeneRIF:15051828
GeneRIF:16224049
GeneRIF:15919794
GeneRIF:15102885
GeneRIF:15806598
GeneRIF:12075576
GeneRIF:12133431
GeneRIF:16027245
GeneRIF:15536594
GeneRIF:12099975
GeneRIF:15034227
GeneRIF:12086939
GeneRIF:14642613
GeneRIF:12788860
GeneRIF:12097321
GeneRIF:11800057
GeneRIF:15111497
DOID:9970
GeneRIF:12483461
GeneRIF:15334374
GeneRIF:15181046
GeneRIF:14602788
GeneRIF:15820771
GeneRIF:12086965
GeneRIF:14746672
GeneRIF:14993225
GeneRIF:14674682
GeneRIF:14968297
GeneRIF:12163041
GeneRIF:15331564
GeneRIF:12888635
GeneRIF:15983201
Obesity (disorder)
GeneRIF:12375583
GeneRIF:16260612
GeneRIF:15889231
GeneRIF:12900437
GeneRIF:12660874
GeneRIF:15886715
GeneRIF:15897476
GeneRIF:15048662
GeneRIF:12899679
James Malone
A disease is a disposition that describes states of disease associated with a particular sample and/or organism.
disease
Ele Holloway
James Malone
BC-2
James Malone
CASRN:678-39-7
Ele Holloway
8:2 fluorotelomer alcohol
DSSTox_CID:9904
Tomasz Adamusiak
DSSTox_Generic_SID:29904
8:2 FTOH
STRUCTURE_Formula:C10H5F17O
STRUCTURE_ChemicalName_IUPAC:3,3,4,4,5,5,6,6,7,7,8,8,9,9,10,10,10-heptadecafluorodecan-1-ol
cholesterol
(3beta)-cholest-5-en-3-ol
22401
2401
57-88-5
C27H46O
InChIKey=RGLYKWWBQGJZGM-ISLYRVAYBW
trans-Diethylstilbesterol
(E)-3,4-bis(4-hydroxyphenyl)-3-hexene
alpha,alpha'-diethyl-(E)-4,4'-stilbenediol
http://www.ebi.ac.uk/efo/EFO_0001522
James Malone
4,4'-(3E)-hex-3-ene-3,4-diyldiphenol
An estrogen that has formula C18H20O2.
InChI=1/C18H20O2/c1-3-17(13-5-9-15(19)10-6-13)18(4-2)14-7-11-16(20)12-8-14/h5-12,19-20H,3-4H2,1-2H3/b18-17+
CC\\C(c1ccc(O)cc1)=C(\\CC)c1ccc(O)cc1
diethylstilbestrolum
trans-Diethylstilboesterol
diethylstilbestrol
CHEBI:41922
(E)-4,4'-(1,2-diethyl-1,2-ethenediyl)bisphenol
4,4'-dihydroxy-alpha,beta-diethylstilbene
trans-Diethylstilbestrol
dietilestilbestrol
trans-4,4'-(1,2-diethyl-1,2-ethenediyl)bisphenol
C18H20O2
Distilbene
James Malone
juvenile days 30-44
ZFS:0000042
ciprofloxacin
1-cyclopropyl-6-fluoro-4-oxo-7-piperazin-1-yl-1,4-dihydroquinoline-3-carboxylic acid
22824
2824
85721-33-1
C17H18FN3O3
ciproxin; cipro
Tomasz Adamusiak
trunk mesoderm anlage
FBbt:00005436
Ele Holloway
James Malone
SN56.B5.G4
Asian Indians
Tomasz Adamusiak
In North America the term is used to distinguish a person having origins in the original peoples of the Indian sub-continent from Native Americans.
Asian Indians[accessedResource: NCIt:C41262][accessDate: 04-11-2010]
Hindu
Asian Indian
NCIt:C41262
Hindu[accessedResource: NCIt:C41262][accessDate: 04-11-2010]
In North America the term is used to distinguish a person having origins in the original peoples of the Indian sub-continent from Native Americans.[accessedResource: NCIt:C41262][accessDate: 04-11-2010]
Tomasz Adamusiak
embryonic outer optic lobe primordium
FBbt:00005822
Tomasz Adamusiak
telencephalic ventricle
ZFA:0000696
James Malone
HCC15
FMAID:9589
EHDAA:3688
EMAPA:17764
MAT:0000113
SAEL:66
BTO:0000144
James Malone
Meninx[accessedResource: FMAID:9589][accessDate: 04-11-2010]
MA:0000113
EV:0100312
meninx
Any of the three membranes that envelop the brain and spinal cord.
Any of the three membranes that envelop the brain and spinal cord.[accessedResource: BTO:0000144][accessDate: 04-11-2010]
meninges
Tomasz Adamusiak
CASRN:68047-06-3
4-hydroxytamoxifen
STRUCTURE_Formula:C26H29NO2
James Malone
Ele Holloway
DSSTox_Generic_SID:22384
4-OHT; 4OH-tamoxifen; trans-Hydroxytamoxifen; TOT
DSSTox_CID:2384
STRUCTURE_ChemicalName_IUPAC:4-{(1Z)-1-[{4-[2-(dimethylamino)ethoxy]phenyl}(phenyl)methylene]propyl}phenol
Tomasz Adamusiak
trunk musculature
ZFA:0000473
James Malone
CS57664 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158690&type=germplasm
CS57666
http://www.arabidopsis.org/servlets/TairObject?id=1005158690&type=germplasm
James Malone
GLI72
Ele Holloway
James Malone
SW948
James Malone
segmentation 14-19 somites
ZFS:0000026
Tomasz Adamusiak
E-YSL
ZFA:0000309
XAO:0000178
PNS[accessedResource: FBbt:00005098][accessDate: 04-11-2010]
The outer parts of the nervous system that perform sensory and motor functions.
FBbt:00005098
The peripheral nervous system (PNS) connects the central nervous system (CNS) to sensory organs (such as the eye and ear), other organs of the body, muscles, blood vessels and glands.[accessedResource: BTO:0001028][accessDate: 04-11-2010]
The outer parts of the nervous system that perform sensory and motor functions.[accessedResource: FBbt:00005098][accessDate: 04-11-2010]
peripheral nervous system
AAO:0000429
EMAPA:16665
PNS
The peripheral nervous system (PNS) connects the central nervous system (CNS) to sensory organs (such as the eye and ear), other organs of the body, muscles, blood vessels and glands.
MAT:0000338
BTO:0001028
TADS:0000221
James Malone
EHDAA:2893
James Malone
HCC1569
The bodily system that is composed of skeletal, smooth, and cardiac muscle tissue and functions in movement of the body or of materials through the body, maintenance of posture, and heat production.
musculature system[accessedResource: TAO:0000548][accessDate: 04-11-2010]
motor system[accessedResource: MAT:0000025][accessDate: 04-11-2010]
ZFA:0000548
musculature[accessedResource: MAT:0000025][accessDate: 04-11-2010]
musculature system
WBbt:0005737
EV:0100146
TADS:0000324
muscle system
James Malone
AAO:0000307
muscular system
TAO:0000548
muscles[accessedResource: TAO:0000548][accessDate: 04-11-2010]
musculature
MAT:0000025
muscle
The bodily system that is composed of skeletal, smooth, and cardiac muscle tissue and functions in movement of the body or of materials through the body, maintenance of posture, and heat production.[accessedResource: BTO:0001485][accessDate: 04-11-2010]
muscles
MFO:0002100
motor system
muscle[accessedResource: MAT:0000025][accessDate: 04-11-2010]
FBbt:00005069
muscule system
BTO:0001485
MA:0000015
muscle system[accessedResource: MAT:0000025][accessDate: 04-11-2010]
OC1(CCN(CCCC(=O)c2ccc(F)cc2)CC1)c1ccc(Cl)cc1
haloperidolum
A hydroxypiperidine that has formula C21H23ClFNO2.
4'-fluoro-4-(4-(p-chlorophenyl)-4-hydroxypiperidinyl)butyrophenone
1-(3-p-fluorobenzoylpropyl)-4-p-chlorophenyl-4-hydroxypiperidine
http://www.ebi.ac.uk/efo/EFO_0001549
C21H23ClFNO2
4-(4-(para-chlorophenyl)-4-hydroxypiperidino)-4'-fluorobutyrophenone
A compound composed of a central piperidine structure with hydroxy and p-chlorophenyl substituents at position 4; and an N-linked p-fluorobutyrophenone moiety.
InChI=1/C21H23ClFNO2/c22-18-7-5-17(6-8-18)21(26)11-14-24(15-12-21)13-1-2-20(25)16-3-9-19(23)10-4-16/h3-10,26H,1-2,11-15H2
4'-fluoro-4-(4-hydroxy-4-(4'-chlorophenyl)piperidino)butyrophenone
4-[4-(4-chlorophenyl)-4-hydroxypiperidin-1-yl]-1-(4-fluorophenyl)butan-1-one
4-[4-(4-chlorophenyl)-4-hydroxy-1-piperidyl]-1-(4-fluorophenyl)-butan-1-one
gamma-(4-(p-chlorophenyl)-4-hydroxpiperidino)-p-fluorbutyrophenone
haloperidol
InChIKey=LNEPOXFFQSENCJ-UHFFFAOYAL
CHEBI:5613
Haldol
James Malone
HepG2
interstitial cell
James Malone
testis - leydig cell
A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis.[accessedResource: CL:0000178][accessDate: 04-11-2010]
interstitial cell[accessedResource: CL:0000178][accessDate: 04-11-2010]
A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis.
Leydig cell
CL:0000178
Chris Stoeckert
A gene list is a report of the names or identifiers of genes that are the outcome of an analysis or have been put together for the purpose of an analysis.
gene list
James Malone
rosette leaf
PO:0000014
http://www.ebi.ac.uk/efo/EFO_0001464
CHEBI:2365
(2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid
C15H20O4
(7E,9Z)-(6S)-6-hydroxy-3-oxo-11-apo-epsilon-caroten-11-oic acid
2-cis,4-trans-abscisic acid
ABA
CC(\\C=C\\[C@@]1(O)C(C)=CC(=O)CC1(C)C)=C\\C(O)=O
(S)-(+)-abscisic acid
InChI=1/C15H20O4/c1-10(7-13(17)18)5-6-15(19)11(2)8-12(16)9-14(15,3)4/h5-8,19H,9H2,1-4H3,(H,17,18)/b6-5+,10-7-/t15-/m1/s1/f/h17H
abscisin II
InChIKey=JLIDBLDQVAYHNE-MPLKMVHTDC
James Malone
The naturally occurring (1'S)-(+) enantiomer of abscisic acid. It is an important sesquiterpenoid plant hormone which acts as a regulator of plant responses to environmental stresses such as drought and cold.
(+)-abscisic acid
An abscisic acid that has formula C15H20O4.
James Malone
The act of regarding attentively and studying facts and occurrences, gathering data through analyzing, measuring, and drawing conclusions
observation study
SK - Solar keratosis
Senile hyperkeratosis
actinic keratosis (morphologic abnormality)[accessedResource: DOID:8866][accessDate: 04-11-2010]
Senile hyperkeratosis[accessedResource: DOID:8866][accessDate: 04-11-2010]
actinic (Solar) Keratosis[accessedResource: DOID:8866][accessDate: 04-11-2010]
actinic keratosis
actinic keratosis (morphologic abnormality)
actinic keratosis (disorder)[accessedResource: DOID:8866][accessDate: 04-11-2010]
actinic (Solar) Keratosis
SK - Solar keratosis[accessedResource: DOID:8866][accessDate: 04-11-2010]
Ele Holloway
actinic keratosis (disorder)
DOID:8866
Solar keratosis
Solar keratosis[accessedResource: DOID:8866][accessDate: 04-11-2010]
James Malone
James Malone
http://www.ebi.ac.uk/efo/EFO_0001436
A specifically dependent continuant [snap:SpecificallyDependentContinuant] that is exhibited if it inheres in an entity or entities at all (a categorical property).
true
A quality is an entity that describes some aspect which is intrinsic to that particular object and is dependent on or more material entities in which it inheres in or is borne by. Example the color of a tomato, the ambient temperature of air, the circumference of a waist, the shape of a nose, the mass of a piece of gold, the weight of a chimpanzee
quality
James Malone
A microgram is a mass unit which is equal to 1 gram x 10^-15
fg
UO:0000026
femtogram
http://www.ebi.ac.uk/efo/EFO_0001709
true
A mass unit which is equal to 10^[-15] g.
HUVEC cell line
ionomycin
DSSTox_CID:20521
DSSTox_Generic_SID:40521
STRUCTURE_ChemicalName_IUPAC:(4R,6S,8S,10Z,12R,14R,16E,18R,19R,20S,21S)-11,19,21-trihydroxy-22-{(2S,2'R,5S,5'S)-5'-[(1R)-1-hydroxyethyl]-2,5'-dimethyloctahydro-2,2'-bifuran-5-yl}-4,6,8,12,14,18,20-heptamethyl-9-oxodocosa-10,16-dienoic acid
James Malone
Ele Holloway
STRUCTURE_Formula:C41H72O9
CASRN:56092-81-0
Tomasz Adamusiak
Ele Holloway
James Malone
TE85
Tomasz Adamusiak
hindgut anlage
FBbt:00004202
Tomasz Adamusiak
hindgut anlage in statu nascendi
FBbt:00005424
Ele Holloway
James Malone
SNU16
Wasser
InChI=1/H2O/h1H2
water
BOUND WATER
Jie Zheng
James Malone
eau
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#water
Tomasz Adamusiak
hydrogen hydroxide
An inorganic hydroxy compound that has formula H2O.
oxidane
http://www.ebi.ac.uk/efo/EFO_0001637
MO_380
agua
[H]O[H]
acqua
dihydrogen oxide
dihydridooxygen
[OH2]
aqua
H2O
HOH
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#water[accessedResource: MO_380][accessDate: 04-11-2010]
InChIKey=XLYOFNOQVPJJNP-UHFFFAOYAF
James Malone
CS57825 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158849&type=germplasm
CS57825
http://www.arabidopsis.org/servlets/TairObject?id=1005158849&type=germplasm
disease property
A disposition is an entity that essentially causes a specific process or transformation in an entity in which it inheres, under specific circumstances and in conjunction with the laws of nature. For example, the disposition of vegetables to decay when not refrigerated, the disposition of blood to coagulate, the disposition of a patient with a weakened immune system to contract disease.
James Malone
disposition
true
A realizable entity [snap:RealizableEntity] that essentially causes a specific process or transformation in the object [snap:Object] in which it inheres, under specific circumstances and in conjunction with the laws of nature. A general formula for dispositions is: X (object [snap:Object] has the disposition D to (transform, initiate a process) R under conditions C.
http://www.ebi.ac.uk/efo/EFO_0001438
For example, the disposition of vegetables to decay when not refrigerated, the disposition of blood to coagulate, the disposition of a patient with a weakened immune system to contract disease.
blood forming stem cell[accessedResource: CL:0000037][accessDate: 04-11-2010]
HSC[accessedResource: CL:0000037][accessDate: 04-11-2010]
hematopoietic progenitor cell
hematopoietic stem cell
blood forming stem cell
HSC
hemopoietic stem cell[accessedResource: CL:0000037][accessDate: 04-11-2010]
A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.
A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system. Hematopoietic stem cells lack cell markers of effector cells (lin-negative). Lin-negative is defined by lacking one or more of the following cell surface markers: CD2, CD3 epsilon, CD4,CD5,CD8 alpha chain, CD14, CD19, CD20, integrin alpha-M, neural cell adhesion molecule 1, lymphocyte antigen 6G, lymphocyte antigen 76.
hemopoietic stem cell
James Malone
A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system. Hematopoietic stem cells lack cell markers of effector cells (lin-negative). Lin-negative is defined by lacking one or more of the following cell surface markers: CD2, CD3 epsilon, CD4,CD5,CD8 alpha chain, CD14, CD19, CD20, integrin alpha-M, neural cell adhesion molecule 1, lymphocyte antigen 6G, lymphocyte antigen 76.[accessedResource: CL:0000037][accessDate: 04-11-2010]
hemopoietic progenitor cell
colony forming unit hematopoietic[accessedResource: CL:0000037][accessDate: 04-11-2010]
CL:0000037
colony forming unit hematopoietic
James Malone
embryonic gastric caecum
FBbt:00005629
Ele Holloway
James Malone
Tomasz Adamusiak
flagellin
CASRN:12777-81-0
DSSTox_Generic_SID:40482
James Malone
embryonic central nervous system
FBbt:00001056
Ele Holloway
James Malone
4470
Epidermoid carcinoma of lung[accessedResource: SNOMEDCT:254634000][accessDate: 04-11-2010]
Squamous Cell Carcinoma of Lung
Epidermoid Cell Carcinoma of Lung
DOID:3907
Squamous Cell Carcinoma of the Lung[accessedResource: NCIt:C3493][accessDate: 04-11-2010]
James Malone
Epidermoid Cell Carcinoma of the Lung[accessedResource: NCIt:C3493][accessDate: 04-11-2010]
NCIt:C3493
A carcinoma arising from malignant squamous bronchial epithelial cells and characterized by the presence of keratinization and/or intercellular bridges. Cigarette smoking and arsenic exposure are strongly associated with squamous cell lung carcinoma.
Squamous cell carcinoma of lung (disorder)
Squamous Cell Carcinoma of the Lung
Epidermoid Cell Carcinoma of Lung[accessedResource: NCIt:C3493][accessDate: 04-11-2010]
SCC - Squamous cell carcinoma of lung[accessedResource: SNOMEDCT:254634000][accessDate: 04-11-2010]
SCC - Squamous cell carcinoma of lung
Epidermoid carcinoma of lung
squamous cell carcinoma of lung (disorder)[accessedResource: DOID:3907][accessDate: 04-11-2010]
Squamous cell carcinoma of lung[accessedResource: SNOMEDCT:254634000][accessDate: 04-11-2010]
Epidermoid cell carcinoma of the lung
Epidermoid Cell Lung Carcinoma
Epidermoid Cell Lung Carcinoma[accessedResource: NCIt:C3493][accessDate: 04-11-2010]
squamous cell lung carcinoma
GeneRIF:12107845
A carcinoma arising from malignant squamous bronchial epithelial cells and characterized by the presence of keratinization and/or intercellular bridges. Cigarette smoking and arsenic exposure are strongly associated with squamous cell lung carcinoma.[accessedResource: NCIt:C3493][accessDate: 04-11-2010]
GeneRIF:15889794
SNOMEDCT:254634000
Ele Holloway
James Malone
NCI-H1563
submandibular gland
submaxillary gland
James Malone
Submaxillary Gland[accessedResource: NCIt:C12233][accessDate: 04-11-2010]
NCIt:C12233
BTO:0001316
One of the three chief, paired salivary glands, predominantly serous, lying partly above and partly below the posterior half of the base of the mandible.
One of two salivary glands in the neck, located in the space bound by the two bellies of the digastric muscle and the angle of the mandible. It discharges through the submandibular duct. (MeSH)
One of two salivary glands in the neck, located in the space bound by the two bellies of the digastric muscle and the angle of the mandible. It discharges through the submandibular duct. (MeSH)[accessedResource: NCIt:C12233][accessDate: 04-11-2010]
One of the three chief, paired salivary glands, predominantly serous, lying partly above and partly below the posterior half of the base of the mandible.[accessedResource: BTO:0001316][accessDate: 04-11-2010]
CL:0000337
neuroblast[accessedResource: CL:0000031][accessDate: 04-11-2010]
neuroblast (sensu Vertebrata)
An embryonic cell that develops into a nerve cell or neuron.[accessedResource: CL:0000337][accessDate: 04-11-2010]
Tomasz Adamusiak
adrenal neuroblast
CL:0000031
James Malone
An embryonic cell that develops into a nerve cell or neuron.
neuroblast
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#funder[accessedResource: MO_520][accessDate: 04-11-2010]
Tomasz Adamusiak
funder
MO_520
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#funder
true
Jie Zheng
MO_548
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_type[accessedResource: MO_548][accessDate: 04-11-2010]
epithelial, glial.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_type
A cell type is a distinct morphological or functional form of cell. Examples are epithelial, glial etc.
cell type
Tomasz Adamusiak
James Malone
The assemblage of physical properties or qualities by which male is distinguished from female; the physical difference between male and female; the distinguishing peculiarity of male or female.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#sex[accessedResource: MO_680][accessDate: 04-11-2010]
An organismal quality inhering in a bearer by virtue of the bearer's ability to undergo sexual reproduction in order to differentiate the individuals or types involved.[accessedResource: PATO:0000047][accessDate: 04-11-2010]
biological sex
An organismal quality inhering in a bearer by virtue of the bearer's ability to undergo sexual reproduction in order to differentiate the individuals or types involved.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#sex
James Malone
Tomasz Adamusiak
NCIt:C28421
PATO:0000047
biological sex[accessedResource: PATO:0000047][accessDate: 04-11-2010]
The assemblage of physical properties or qualities by which male is distinguished from female; the physical difference between male and female; the distinguishing peculiarity of male or female.[accessedResource: NCIt:C28421][accessDate: 04-11-2010]
MO_680
Jie Zheng
Term applied to any organism able to undergo sexual reproduction in order to differentiate the individuals or types involved. Sexual reproduction is defined as the ability to exchange genetic material with the potential of recombinant progeny.
sex
Tomasz Adamusiak
empyema
NCIt:C34572
TT - Full tuberculoid leprosy[accessedResource: SNOMEDCT:70143003][accessDate: 04-11-2010]
Nodular leprosy[accessedResource: SNOMEDCT:70143003][accessDate: 04-11-2010]
Tuberculoid leprosy [type T]
Macular Leprosy
Type TT leprosy[accessedResource: SNOMEDCT:70143003][accessDate: 04-11-2010]
Leprosies, Macular
TT - Full tuberculoid leprosy
Full tuberculoid leprosy
Nodular leprosy
Tuberculoid leprosy (disorder)[accessedResource: SNOMEDCT:70143003][accessDate: 04-11-2010]
Leprosies, Tuberculoid[accessedResource: MSH:D015441][accessDate: 04-11-2010]
MSH:D015441
Leprosy, Neural[accessedResource: MSH:D015441][accessDate: 04-11-2010]
James Malone
Leprosies, Neural[accessedResource: MSH:D015441][accessDate: 04-11-2010]
Tuberculoid leprosy (disorder)
Smooth leprosy[accessedResource: SNOMEDCT:70143003][accessDate: 04-11-2010]
A principal or polar form of LEPROSY in which the skin lesions are few and are sharply demarcated. Peripheral nerve involvement is pronounced and may be severe. Unlike lepromatous leprosy (LEPROSY, LEPROMATOUS), the lepromin test is positive. Tuberculoid leprosy is rarely a source of infection to others.
Leprosy, Macular[accessedResource: MSH:D015441][accessDate: 04-11-2010]
Tuberculoid Leprosies
Type T leprosy[accessedResource: SNOMEDCT:70143003][accessDate: 04-11-2010]
DOID:1025
Smooth leprosy
type T leprosy
SNOMEDCT:70143003
Leprosy, Neural
A principal or polar form of LEPROSY in which the skin lesions are few and are sharply demarcated. Peripheral nerve involvement is pronounced and may be severe. Unlike lepromatous leprosy (LEPROSY, LEPROMATOUS), the lepromin test is positive. Tuberculoid leprosy is rarely a source of infection to others.[accessedResource: MSH:D015441][accessDate: 04-11-2010]
Neural Leprosies
Full tuberculoid leprosy[accessedResource: SNOMEDCT:70143003][accessDate: 04-11-2010]
ICD9:030.1
tuberculoid leprosy
Type TT leprosy
Leprosies, Macular[accessedResource: MSH:D015441][accessDate: 04-11-2010]
Tuberculoid leprosy [type T][accessedResource: DOID:1025][accessDate: 04-11-2010]
James Malone
MDAMB231
Tomasz Adamusiak
James Malone
Ele Holloway
DSSTox_Generic_SID:42628
DSSTox_CID:22628
STRUCTURE_ChemicalName_IUPAC:4-fluoro-N-{2-[4-(7-methoxynaphthalen-1-yl)piperazin-1-yl]ethyl}benzamide hydrochloride
S 14506 hydrochloride
STRUCTURE_Formula:C24H27ClFN3O2
CASRN:135721-98-1
James Malone
blastula 1k-cell
ZFS:0000011
Antineoplastic agent isolated from the bark of the Pacific yew tree, Taxus brevifolia.
http://www.ebi.ac.uk/efo/EFO_0001622
[H][C@]12[C@H](OC(=O)c3ccccc3)[C@]3(O)C[C@H](OC(=O)[C@H](O)[C@@H](NC(=O)c4ccccc4)c4ccccc4)C(C)=C([C@@H](OC(C)=O)C(=O)[C@]1(C)[C@@H](O)C[C@H]1OC[C@@]21OC(C)=O)C3(C)C
Antineoplastic agent isolated from the bark of the Pacific yew tree, Taxus brevifolia. Note that the use of the name taxol is now limited, as Taxol is a registered trade mark.
5beta,20-Epoxy-1,2-alpha,4,7beta,10beta,13alpha-hexahydroxytax-11-en-9-one 4,10-diacetate 2-benzoate 13-ester with (2R,3S)-N-benzoyl-3-phenylisoserine
James Malone
(2aR-(2aalpha,4beta,4abeta,6beta,9alpha(alpha R*,betaS*),11alpha,12alpha,12balpha))-beta-(Benzoylamino)-alpha-hydroxybenzenepropanoic acid 6,12b-bis(acetyloxy)-12-(benzoyloxy)-2a,3,4,4a,5,6,9,10,11,12,12a,12b-dodecahydro-4,11-dihydroxy-4a,8,13,13-tetramethyl-5-oxo-7,11-methano-1H-cyclodeca(3,4)benz(1,2-b)oxet-9-yl ester
CHEBI:45863
Paclitaxel
InChIKey=RCINICONZNJXQF-GXKQXQCDDN
4alpha,10beta-bis(acetyloxy)-13alpha-[(2S,3S)-3-(benzoylamino)-2-hydroxy-3-phenylpropanoyloxy]-1,7beta-dihydroxy-9-oxo-5beta,20-epoxytax-11-en-2alpha-yl benzoate
C47H51NO14
taxol
InChI=1/C47H51NO14/c1-25-31(60-43(56)36(52)35(28-16-10-7-11-17-28)48-41(54)29-18-12-8-13-19-29)23-47(57)40(61-42(55)30-20-14-9-15-21-30)38-45(6,32(51)22-33-46(38,24-58-33)62-27(3)50)39(53)37(59-26(2)49)34(25)44(47,4)5/h7-21,31-33,35-38,40,51-52,57H,22-24H2,1-6H3,(H,48,54)/t31-,32-,33+,35-,36+,37+,38-,40-,45+,46-,47+/m0/s1/f/h48H
Taxol A
Tomasz Adamusiak
anterior lateral line primordium
ZFA:0005117
James Malone
CASRN:7647-17-8
Ele Holloway
DSSTox_Generic_SID:40435
STRUCTURE_Formula:ClCs
Tomasz Adamusiak
caesium chloride
STRUCTURE_ChemicalName_IUPAC:caesium chloride
DSSTox_CID:20435
An experiment where proteins in a sample are detected, quantified or otherwise analysed, e.g. antibody profiling using an array based technology
proteomic profiling by array
James Malone
GM07056
MA:0000378
XAO:0000144
BTO:0001409
FMAID:9704
EMAPA:17950
Organ with organ cavity which connects the renal sinus to the urinary bladder. Examples: There are only two ureters, the right and the left ureters.
EHDAA:7009
WBbt:0005777
EV:0100097
The tube that carries urine from the kidney to the bladder.[accessedResource: BTO:0001409][accessDate: 04-11-2010]
The tube that carries urine from the kidney to the bladder.
ureter
WBbt:0004540
James Malone
Ele Holloway
James Malone
RPMI8226
James Malone
Natural Language Generator 8th April 2010
LC-1F
A LC-1F is a cell line.
A LC-1F is both something that is bearer of a squamous cell lung carcinoma, and something that derives from
a Homo sapiens.
Ele Holloway
James Malone
cranial placodes
A placode is a tissue modifier describing the thickening of embryonic ectoderm from which a definitive structure develops. For example, the cranial placodes.
placode
MAT:0000479
GM12892
James Malone
Natural Language Generator 8th April 2010
A GM12892 is a cell line.
A GM12892 is all of the following: something that has as quality a female, something that derives from Homo sapiens, and something that derives from a b cell.
Tomasz Adamusiak
posterior pancreatic bud
ZFA:0001370
OBI_0200000
James Malone
data analysis
A data transformation is a process which produces output data from input data
A data transformation is a process which produces output data from input data - e.g. the application of a clustering protocol to microarray data or the application of a statistical testing method on a primary data set to determine a p-value.
http://www.ebi.ac.uk/efo/EFO_0000393
data processing
data transformation
Ele Holloway
James Malone
WM115
Tomasz Adamusiak
ovarian follicle stage I
ZFA:0001263
Ele Holloway
James Malone
NCI-H358
James Malone
CS57727 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158751&type=germplasm
CS57727
http://www.arabidopsis.org/servlets/TairObject?id=1005158751&type=germplasm
James Malone
MOLT-4
MOLT4
http://www.ebi.ac.uk/efo/EFO_0001559
2-chloro-2-difluoromethoxy-1,1,1-trifluoroethane
FC(F)OC(Cl)C(F)(F)F
Aerrane
C3H2ClF5O
isofluranum
An organofluorine compound that has formula C3H2ClF5O.
isoflurane
CHEBI:6015
InChIKey=PIWKPBJCKXDKJR-UHFFFAOYAP
InChI=1/C3H2ClF5O/c4-1(3(7,8)9)10-2(5)6/h1-2H
James Malone
Forane
1-chloro-2,2,2-trifluoroethyl difluoromethyl ether
isoflurano
Ethane
Forene
A type of connective tissue neoplasm arising from intralobular stroma of the BREAST. It is characterized by the rapid enlargement of an asymmetric firm mobile mass. Histologically, its leaf-like stromal clefts are lined by EPITHELIAL CELLS.[accessedResource: MSH:D003557][accessDate: 04-11-2010]
phyllodes tumor
Cystosarcoma phyllodes NOS (morphologic abnormality)[accessedResource: DOID:2608][accessDate: 04-11-2010]
Cystosarcoma phyllodes, NOS
Cystosarcoma Phyllodes, Malignant
Phyllodes tumour, borderline[accessedResource: SNOMEDCT:71232009][accessDate: 04-11-2010]
SNOMEDCT:71232009
MSH:D003557
Cystosarcoma Phylloides[accessedResource: MSH:D003557][accessDate: 04-11-2010]
A type of connective tissue neoplasm arising from intralobular stroma of the BREAST. It is characterized by the rapid enlargement of an asymmetric firm mobile mass. Histologically, its leaf-like stromal clefts are lined by EPITHELIAL CELLS.
Phyllodes neoplasm[accessedResource: DOID:2608][accessDate: 04-11-2010]
Phyllodes tumor, NOS[accessedResource: SNOMEDCT:71232009][accessDate: 04-11-2010]
Malignant Cystosarcoma Phyllodes[accessedResource: MSH:D003557][accessDate: 04-11-2010]
Phyllodes Tumors[accessedResource: MSH:D003557][accessDate: 04-11-2010]
James Malone
Cystosarcoma phyllodes, NOS[accessedResource: DOID:2608][accessDate: 04-11-2010]
NCIt:C2977
[M]Cystosarcoma phyllodes NOS
Phyllodes tumor, borderline
Phyllodes Tumors
GeneRIF:15044924
Phyllodes tumor, borderline (morphologic abnormality)[accessedResource: SNOMEDCT:71232009][accessDate: 04-11-2010]
Phyllodes Neoplasm
A benign, borderline, or malignant fibroepithelial neoplasm arising from the breast and rarely the prostate gland. It may recur following resection. The recurrence rates are higher for borderline and malignant phyllodes tumors. In borderline and malignant phyllodes tumors metastases to distant anatomic sites can occur. The incidence of metastases is higher in malignant phyllodes tumors.[accessedResource: NCIt:C2977][accessDate: 04-11-2010]
Phyllodes tumor, borderline[accessedResource: SNOMEDCT:71232009][accessDate: 04-11-2010]
Cystosarcoma phyllodes NOS (morphologic abnormality)
[M]Cystosarcoma phyllodes NOS[accessedResource: SNOMEDCT:189825002][accessDate: 04-11-2010]
Phyllodes tumour
Phyllodes tumour[accessedResource: SNOMEDCT:71232009][accessDate: 04-11-2010]
Phyllodes tumour, borderline
Cystosarcoma phyllodes
Cystosarcoma Phylloides
SNOMEDCT:189825002
[M]Cystosarcoma phyllodes NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189825002][accessDate: 04-11-2010]
Cystosarcoma Phyllodes[accessedResource: MSH:D003557][accessDate: 04-11-2010]
Phyllodes tumor, NOS
Phyllodes tumor, borderline (morphologic abnormality)
A benign, borderline, or malignant fibroepithelial neoplasm arising from the breast and rarely the prostate gland. It may recur following resection. The recurrence rates are higher for borderline and malignant phyllodes tumors. In borderline and malignant phyllodes tumors metastases to distant anatomic sites can occur. The incidence of metastases is higher in malignant phyllodes tumors.
DOID:2608
[M]Cystosarcoma phyllodes NOS (morphologic abnormality)
Lateral geniculate body[accessedResource: FMA:62209][accessDate: 04-11-2010]
lateral geniculate nucleus
James Malone
Lateral geniculate body
FMA:62209
Lateral geniculate complex
MA:0000869
GeneRIF:14769912
Narcolepsy NOS[accessedResource: DOID:8986][accessDate: 04-11-2010]
Narcoleptic Syndrome[accessedResource: MSH:D009290][accessDate: 04-11-2010]
Gelineau Syndrome
Narcolepsy NOS
GeneRIF:15157381
GeneRIF:12823767
GeneRIF:15070772
GeneRIF:12601524
Syndrome, Gelineau[accessedResource: MSH:D009290][accessDate: 04-11-2010]
Syndrome, Narcolepsy-Cataplexy
Narcolepsy (disorder)
Narcoleptic Syndromes
Narcolepsy, without cataplexy[accessedResource: DOID:8986][accessDate: 04-11-2010]
Gelineau's Syndrome[accessedResource: MSH:D009290][accessDate: 04-11-2010]
Narcolepsy-Cataplexy Syndromes
Syndromes, Gelineau's[accessedResource: MSH:D009290][accessDate: 04-11-2010]
Paroxysmal Sleep
ICD9:347.0
A condition characterized by recurrent episodes of daytime somnolence and lapses in consciousness (microsomnias) that may be associated with automatic behaviors and AMNESIA. CATAPLEXY; SLEEP PARALYSIS, and hypnagogic HALLUCINATIONS frequently accompany narcolepsy. The pathophysiology of this disorder includes sleep-onset rapid eye movement (REM) sleep, which normally follows stage III or IV sleep. (From Neurology 1998 Feb;50(2 Suppl 1):S2-S7)
Narcolepsy, without cataplexy
Syndromes, Narcoleptic[accessedResource: MSH:D009290][accessDate: 04-11-2010]
GeneRIF:15453542
GeneRIF:11796186
narcolepsy
Narcolepsy-Cataplexy Syndrome[accessedResource: MSH:D009290][accessDate: 04-11-2010]
Syndromes, Gelineau's
Syndromes, Narcolepsy-Cataplexy[accessedResource: MSH:D009290][accessDate: 04-11-2010]
paroxysmal sleep[accessedResource: DOID:8986][accessDate: 04-11-2010]
GeneRIF:15985489
A condition characterized by recurrent episodes of daytime somnolence and lapses in consciousness (microsomnias) that may be associated with automatic behaviors and AMNESIA. CATAPLEXY; SLEEP PARALYSIS, and hypnagogic HALLUCINATIONS frequently accompany narcolepsy. The pathophysiology of this disorder includes sleep-onset rapid eye movement (REM) sleep, which normally follows stage III or IV sleep. (From Neurology 1998 Feb;50(2 Suppl 1):S2-S7)[accessedResource: MSH:D009290][accessDate: 04-11-2010]
Syndrome, Narcoleptic
Gelineau's Syndrome
GeneRIF:15091316
DOID:8986
GeneRIF:12414876
James Malone
GeneRIF:12535955
Narcolepsy (disorder)[accessedResource: DOID:8986][accessDate: 04-11-2010]
MSH:D009290
Tomasz Adamusiak
rhombomere 3
ZFA:0000948
primary hyperparathyroidism (disorder)[accessedResource: DOID:11202][accessDate: 04-11-2010]
Ele Holloway
Tomasz Adamusiak
primary hyperparathyroidism
DOID:11202
HP:0008200
primary hyperparathyroidism (disorder)
James Malone
true
1.8
duplicate of EFO_0001253
obsolete_THP1
aluminium hydroxide
21645-51-2
36405
H3AlO3
aluminum trihydroxide
Al(OH)3
James Malone
A biological agent that causes disease or illness to its host
pathogen
antirheumatic agent
http://www.ebi.ac.uk/efo/EFO_0001487
antirheumatic drugs
anti-rheumatic drugs
CHEBI:35842
A drug used to treat rheumatoid arthritis.
CHEBI:35842
James Malone
antirheumatic drug
Juvenile rheumatoid arthritis, NOS
Juvenile rheumatoid arthritis NOS (disorder)
Juvenile seropositive polyarthritis
Juvenile rheumatoid arthritis (disorder)
DOID:677
juvenile arthritis
Juvenile rheumatoid arthritis (disorder)[accessedResource: DOID:677][accessDate: 04-11-2010]
Juvenile chronic arthritis (disorder)[accessedResource: DOID:677][accessDate: 04-11-2010]
Juvenile seropositive polyarthritis[accessedResource: DOID:677][accessDate: 04-11-2010]
juvenile arthritis[accessedResource: DOID:677][accessDate: 04-11-2010]
Juvenile rheumatoid a.
Juvenile rheumatoid a.[accessedResource: DOID:677][accessDate: 04-11-2010]
Juvenile rheumatoid arthritis NOS (disorder)[accessedResource: DOID:677][accessDate: 04-11-2010]
Tomasz Adamusiak
Juvenile rheumatoid arthritis[accessedResource: DOID:677][accessDate: 04-11-2010]
Juvenile idiopathic arthritis (disorder)[accessedResource: DOID:677][accessDate: 04-11-2010]
Juvenile idiopathic arthritis (disorder)
Juvenile rheumatoid arthritis, NOS[accessedResource: DOID:677][accessDate: 04-11-2010]
Juvenile chronic arthritis (disorder)
chronic childhood arthritis
Juvenile Rheumatoid Arthritis
Ele Holloway
Tomasz Adamusiak
primitive internal carotid artery
ZFA:0001053
A neoplasm arising from the epithelium. It may be encapsulated or non-encapsulated but non-invasive. The neoplastic epithelial cells may or may not display cellular atypia or dysplasia. In the gastrointestinal tract, when dysplasia becomes severe it is sometimes called carcinoma in situ. Representative examples are pituitary gland adenoma, follicular adenoma of the thyroid gland, and adenomas (or adenomatous polyps) of the gastrointestinal tract.[accessedResource: NCIt:C2855][accessDate: 04-11-2010]
James Malone
A neoplasm arising from the epithelium. It may be encapsulated or non-encapsulated but non-invasive. The neoplastic epithelial cells may or may not display cellular atypia or dysplasia. In the gastrointestinal tract, when dysplasia becomes severe it is sometimes called carcinoma in situ. Representative examples are pituitary gland adenoma, follicular adenoma of the thyroid gland, and adenomas (or adenomatous polyps) of the gastrointestinal tract.
adenoma
NCIt:C2855
Tomasz Adamusiak
visual primordium
FBbt:00001059
DSSTox_CID:1105
STRUCTURE_Formula:C6Cl5NO2
Tomasz Adamusiak
CASRN:82-68-8
James Malone
Ele Holloway
DSSTox_Generic_SID:21105
STRUCTURE_ChemicalName_IUPAC:1,2,3,4,5-pentachloro-6-nitrobenzene
pentachloronitrobenzene
2-Ethylhexyl phthalate
InChI=1/C16H22O4/c1-3-5-8-12(4-2)11-20-16(19)14-10-7-6-9-13(14)15(17)18/h6-7,9-10,12H,3-5,8,11H2,1-2H3,(H,17,18)/f/h17H
phthalic acid, 2-ethylhexyl ester
C16H22O4
2-(2-ethylhexyloxycarbonyl)benzoic acid
http://www.ebi.ac.uk/efo/EFO_0001574
2-([(2-ethylhexyl)oxy]carbonyl)benzoic acid
monoethylhexyl phthalate
CCCCC(CC)COC(=O)c1ccccc1C(O)=O
mono-2-ethylhexyl phthalate
A phthalate ester that has formula C16H22O4.
InChIKey=DJDSLBVSSOQSLW-HCKMINDGCL
1,2-benzenedicarboxylic acid, mono(2-ethylhexyl) ester
MEHP
CHEBI:17243
(2-ethylhexyl) hydrogen phthalate
Thoracic part of aorta[accessedResource: FMAID:3786][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
thoracic aorta
FMAID:3786
Thoracic part of aorta
James Malone
Tomasz Adamusiak
infant
MIAA:0000402
NIFSTD:birnlex_438
NIFSTD:birnlex_695
Tomasz Adamusiak
ILSXISS103/TejJ
http://jaxmice.jax.org/strain/009289.html
Tomasz Adamusiak
posttemporal
ZFA:0000549
Epidermoid carcinoma, keratinizing
keratinizing squamous cell carcinoma
Keratinizing squamous cell carcinoma - large cell
Squamous cell carcinoma, keratinising[accessedResource: SNOMEDCT:18048008][accessDate: 04-11-2010]
Keratinizing squamous cell carcinoma - large cell[accessedResource: SNOMEDCT:18048008][accessDate: 04-11-2010]
NCIt:C4105
squamous cell carcinoma, keratinizing (morphologic abnormality)[accessedResource: DOID:5521][accessDate: 04-11-2010]
[M]Squamous cell carcinoma, keratinizing type NOS[accessedResource: SNOMEDCT:18048008][accessDate: 04-11-2010]
DOID:5521
Squamous cell carcinomas with morphologically prominent production of keratin.[accessedResource: NCIt:C4105][accessDate: 04-11-2010]
Epidermoid carcinoma, keratinising[accessedResource: SNOMEDCT:18048008][accessDate: 04-11-2010]
Keratinising squamous cell carcinoma
Squamous cell carcinoma, keratinizing, NOS
Squamous cell carcinoma, large cell, keratinising[accessedResource: SNOMEDCT:18048008][accessDate: 04-11-2010]
[M]Squamous cell carcinoma, keratinizing type NOS
Squamous cell carcinoma, large cell, keratinising
Epidermoid carcinoma, keratinizing[accessedResource: SNOMEDCT:18048008][accessDate: 04-11-2010]
SNOMEDCT:18048008
Squamous cell carcinoma, keratinizing, NOS[accessedResource: SNOMEDCT:18048008][accessDate: 04-11-2010]
[M]Squamous cell carcinoma, keratinising type NOS[accessedResource: SNOMEDCT:18048008][accessDate: 04-11-2010]
[M]Squamous cell carcinoma, keratinising type NOS
Keratinising epidermoid carcinoma
Squamous cell carcinoma, keratinizing (morphologic abnormality)
James Malone
Squamous cell carcinomas with morphologically prominent production of keratin.
James Malone
Ele Holloway
CAL54
Ele Holloway
James Malone
SKNDZ
GeneRIF:12067203
A primary melanoma arising from atypical melanocytes in the skin. Precursor lesions include acquired and congenital melanocytic nevi, and dysplastic nevi. Several histologic variants have been recognized, including superficial spreading melanoma, acral lentiginous melanoma, nodular melanoma, and lentigo maligna melanoma.
Melanoma of skin, site unspecified[accessedResource: ICD9:172.9][accessDate: 04-11-2010]
GeneRIF:12011132
ICD9:172.3
MALIG MELANOMA SKIN NEC[accessedResource: ICD9:172.8][accessDate: 04-11-2010]
GeneRIF:15743033
Malignant melanoma of other specified skin site (disorder)[accessedResource: SNOMEDCT:188080004][accessDate: 04-11-2010]
MM - Malignant melanoma of skin
Malignant Melanoma of Skin
SNOMEDCT:188082007
Malignant melanoma of skin[accessedResource: ICD9:172][accessDate: 04-11-2010]
SNOMEDCT:93655004
Melanoma of Skin
Skin Melanoma
Melanoma of Skin[accessedResource: NCIt:C3510][accessDate: 04-11-2010]
Malignant melanoma of skin NOS (disorder)[accessedResource: SNOMEDCT:188082007][accessDate: 04-11-2010]
Malignant melanoma of skin of other and unspecified parts of face
GeneRIF:12459644
Malignant melanoma of other specified sites of skin
Malignant Melanoma of Skin Stage Unspecified
Malignant melanoma of skin, NOS
Malignant Melanoma (of Skin), Stage Unspecified[accessedResource: NCIt:C3510][accessDate: 04-11-2010]
MALIG MELANOMA SKIN NOS
A primary melanoma arising from atypical melanocytes in the skin. Precursor lesions include acquired and congenital melanocytic nevi, and dysplastic nevi. Several histologic variants have been recognized, including superficial spreading melanoma, acral lentiginous melanoma, nodular melanoma, and lentigo maligna melanoma.[accessedResource: NCIt:C3510][accessDate: 04-11-2010]
MALIG MELANOMA SKIN NEC
Malignant melanoma of skin NOS (disorder)
SNOMEDCT:188080004
MAL MELANOM FACE NEC/NOS
[X]Malignant melanoma of skin, unspecified (disorder)[accessedResource: SNOMEDCT:190105009][accessDate: 04-11-2010]
GeneRIF:15751018
[X]Malignant melanoma of skin, unspecified
SNOMEDCT:190105009
ICD9:172
Malignant melanoma of other specified skin site
NCIt:C3510
Malignant melanoma of other specified skin site (disorder)
GeneRIF:15057044
Malignant Cutaneous Melanoma[accessedResource: NCIt:C3510][accessDate: 04-11-2010]
MALIG MELANOMA SKIN NOS[accessedResource: ICD9:172.9][accessDate: 04-11-2010]
Malignant melanoma of skin (disorder)
ICD9:172.8
DOID:8923
Malignant Cutaneous Melanoma
MM - Malignant melanoma of skin[accessedResource: SNOMEDCT:93655004][accessDate: 04-11-2010]
ICD9:172.9
[X]Malignant melanoma of skin, unspecified[accessedResource: SNOMEDCT:190105009][accessDate: 04-11-2010]
James Malone
GeneRIF:11841484
skin melanoma[accessedResource: DOID:8923][accessDate: 04-11-2010]
Malignant melanoma of other specified skin site[accessedResource: SNOMEDCT:188080004][accessDate: 04-11-2010]
Malignant melanoma of skin NOS[accessedResource: SNOMEDCT:188082007][accessDate: 04-11-2010]
Malignant melanoma of skin of other and unspecified parts of face[accessedResource: ICD9:172.3][accessDate: 04-11-2010]
GeneRIF:14714570
MAL MELANOM FACE NEC/NOS[accessedResource: ICD9:172.3][accessDate: 04-11-2010]
Melanoma of skin, site unspecified
Melanoma of the Skin[accessedResource: NCIt:C3510][accessDate: 04-11-2010]
Malignant melanoma of other specified sites of skin[accessedResource: ICD9:172.8][accessDate: 04-11-2010]
[X]Malignant melanoma of skin, unspecified (disorder)
cancer of skin
GeneRIF:12778069
GeneRIF:12376526
Melanoma of the Skin
cutaneous melanoma
Malignant melanoma of skin (disorder)[accessedResource: SNOMEDCT:93655004][accessDate: 04-11-2010]
Tomasz Adamusiak
hypopharynx anlage in statu nascendi
FBbt:00016000
colony forming unit erythroid
CFU-E[accessedResource: CL:0000038][accessDate: 04-11-2010]
erythroid stem cell[accessedResource: CL:0000038][accessDate: 04-11-2010]
burst forming unit erythroid[accessedResource: CL:0000038][accessDate: 04-11-2010]
colony forming unit erythroid[accessedResource: CL:0000038][accessDate: 04-11-2010]
CL:0000038
A progenitor cell committed to the erythroid lineage. This cell is ter119-positive but lacks expression of other hematopoietic lineage markers (lin-negative).[accessedResource: CL:0000038][accessDate: 04-11-2010]
blast forming unit erythroid[accessedResource: CL:0000038][accessDate: 04-11-2010]
A progenitor cell committed to the erythroid lineage. This cell is ter119-positive but lacks expression of other hematopoietic lineage markers (lin-negative).
blast forming unit erythroid
BFU-E
burst forming unit erythroid
erythroid stem cell
Tomasz Adamusiak
CFU-E
BFU-E[accessedResource: CL:0000038][accessDate: 04-11-2010]
erythroid progenitor cell
A progenitor cell committed to the erythroid lineage.
James Malone
An assay where an antigen array is used (antigens deposited on the array) to detect, quantify or otherwise analyse antibodies in solution.
antigen profiling
ArrayExpress production team
An IMR 32 is a cell line.
An IMR 32 is both something that is bearer of a neuroblastoma, and something that derives from a
neuroblast sensu vertebrata.
James Malone
IMR-32
Natural Language Generator 8th April 2010
JCRB0254
Ele Holloway
MKN45 cell
BTO:0001225
MKN45 cell[accessedResource: BTO:0001225][accessDate: 04-11-2010]
MKN-45 cell[accessedResource: BTO:0001225][accessDate: 04-11-2010]
Human gastric adenocarcinoma, established from the poorly differentiated adenocarcinoma of the stomach (medullary type) of a 62-year-old woman.
MKN45
MKN-45
Human gastric adenocarcinoma, established from the poorly differentiated adenocarcinoma of the stomach (medullary type) of a 62-year-old woman.[accessedResource: BTO:0001225][accessDate: 04-11-2010]
James Malone
MKN-45 cell
The (9R,13R)-diastereomer of 12-oxophytodienoic acid.
OPDA
http://www.ebi.ac.uk/efo/EFO_0002482
InChI=1/C18H28O3/c1-2-3-7-11-16-15(13-14-17(16)19)10-8-5-4-6-9-12-18(20)21/h3,7,13-16H,2,4-6,8-12H2,1H3,(H,20,21)/b7-3-/t15-,16-/m1/s1/f/h20H
(9R,13R)-12-oxo-phytodienoic acid
CHEBI:34005
12-oxophytodienoic acid
CC\\C=C/C[C@@H]1[C@H](CCCCCCCC(O)=O)C=CC1=O
InChIKey=PMTMAFAPLCGXGK-VSUHVYTRDP
8-{(1R,5R)-4-oxo-5-[(2Z)-pent-2-en-1-yl]cyclopent-2-en-1-yl}octanoic acid
James Malone
Ele Holloway
C18H28O3
true
The genotype of the individual organism from which the biomaterial was derived. Individual genetic characteristics include polymorphisms, disease alleles, and haplotypes.
obsolete_individual genetic characteristic
Ele Holloway
James Malone
KLE
Ele Holloway
James Malone
SW1463
Tomasz Adamusiak
rhombomere 4
ZFA:0001032
colonic mucosa[accessedResource: BTO:0000271][accessDate: 04-11-2010]
Tomasz Adamusiak
colon mucosa
BTO:0000271
colonic mucosa
Tomasz Adamusiak
Ele Holloway
DSSTox_Generic_SID:42612
nemonapride
James Malone
STRUCTURE_Formula:C21H26ClN3O2
CASRN:75272-39-8
STRUCTURE_ChemicalName_IUPAC:N-[(2S,3S)-1-benzyl-2-methylpyrrolidin-3-yl]-5-chloro-2-methoxy-4-(methylamino)benzamide
DSSTox_CID:22612
James Malone
Strain or line specific to yeast
yeast
Tomasz Adamusiak
floor plate rhombomere 3
ZFA:0000888
1: The proximal segment of the vertebrate hind limb extending from the hip to the knee and supported by a single large bone. n2: The segment of the leg immediately distal to the thigh in a bird or in a quadruped in which the true thigh is obscured.[accessedResource: BTO:0001376][accessDate: 04-11-2010]
James Malone
1: The proximal segment of the vertebrate hind limb extending from the hip to the knee and supported by a single large bone. n2: The segment of the leg immediately distal to the thigh in a bird or in a quadruped in which the true thigh is obscured.
thigh
BTO:0001376
CHEBI:35526
James Malone
http://www.ebi.ac.uk/efo/EFO_0001844
A drug which lowers the blood glucose level.
hypoglycemic drug
antidiabetic
hypoglycemic agent
Tomasz Adamusiak
James Malone
STRUCTURE_ChemicalName_IUPAC:N-[4-methoxy-3-(4-methylpiperazin-1-yl)phenyl]-2'-methyl-4'-(5-methyl-1,2,4-oxadiazol-3-yl)biphenyl-4-carboxamide hydrochloride
STRUCTURE_Formula:C29H32ClN5O3
CASRN:148642-42-6
GR 127935 hydrochloride
DSSTox_Generic_SID:42587
Ele Holloway
DSSTox_CID:22587
B cell derived cell line
A flattened epithelial cell of mesenchymal origin that lines the serous cavity.[accessedResource: CL:0000077][accessDate: 04-11-2010]
Mesotheliocyte[accessedResource: CL:0000077][accessDate: 04-11-2010]
James Malone
A flattened epithelial cell of mesenchymal origin that lines the serous cavity.
mesothelial cell
CL:0000077
Mesotheliocyte
Ele Holloway
James Malone
SW900
James Malone
GM11992
James Malone
An assay in which sequencing technology (e.g. Solexa/454) is used to generate RNA sequence, analyse the transcibed regions of the genome, and or to quantitate transcript abundance
transcription profiling by high throughput sequencing
ArrayExpress Team
RNA-seq
James Malone
mesoderm
FMA:69072
InChIKey=GEWDNTWNSAZUDX-WQMVXFAEBM
InChI=1/C13H20O3/c1-3-4-5-6-11-10(7-8-12(11)14)9-13(15)16-2/h4-5,10-11H,3,6-9H2,1-2H3/b5-4-/t10-,11-/m1/s1
methyl {(1R,2R)-3-oxo-2-[(2Z)-pent-2-en-1-yl]cyclopentyl}acetate
methyl (-)-jasmonate
James Malone
3-oxo-2-(2-pentenyl)cyclopentaneacetic acid methyl ester
http://www.ebi.ac.uk/efo/EFO_0002413
A jasmonate ester that has formula C13H20O3.
C13H20O3
CHEBI:15929
CC\\C=C/C[C@@H]1[C@H](CCC1=O)CC(=O)OC
Ele Holloway
HMEC S1
James Malone
Tomasz Adamusiak
oenocyte primordium
FBbt:00017020
microliter
A microliter is a volume unit which is equal to one millionth of a liter or 10^-6 L.
ul
µl
A volume unit which is equal to one millionth of a liter or 10^[-6] L.
http://www.ebi.ac.uk/efo/EFO_0001717
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ul[accessedResource: MO_926][accessDate: 04-11-2010]
James Malone
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ul
Jie Zheng
true
MO_926
normoblast
CL:0000765
James Malone
normoblast[accessedResource: CL:0000765][accessDate: 04-11-2010]
A nucleated precursor of an erythrocyte.
erythroblast
A nucleated precursor of an erythrocyte that lacks hematopoietic lineage markers.[accessedResource: CL:0000765][accessDate: 04-11-2010]
A nucleated precursor of an erythrocyte that lacks hematopoietic lineage markers.
trichostatin A
C17H22N2O3
CHEBI:46024
http://www.ebi.ac.uk/efo/EFO_0001630
(2E,4E,6R)-7-(4-(dimethylamino)phenyl)-N-hydroxy-4,6-dimethyl-7-oxo-2,4-heptadienamide
InChI=1/C17H22N2O3/c1-12(5-10-16(20)18-22)11-13(2)17(21)14-6-8-15(9-7-14)19(3)4/h5-11,13,22H,1-4H3,(H,18,20)/b10-5+,12-11+/t13-/m1/s1/f/h18H
InChIKey=RTKIYFITIVXBLE-LPBLKGKXDH
(2E,4E,6R)-7-[4-(dimethylamino)phenyl]-N-hydroxy-4,6-dimethyl-7-oxohepta-2,4-dienamide
James Malone
TSA
C[C@@H](C(=O)c1ccc(cc1)N(C)C)\\C=C(C)\\C=C\\C(=O)NO
A trichostatin that has formula C17H22N2O3.
[H]OO[H]
InChIKey=MHAJPDPJQMAIIY-UHFFFAOYAL
InChI=1/H2O2/c1-2/h1-2H
An inorganic peroxide that has formula H2O2.
CHEBI:16240
dihydrogen(peroxide)
[OH(OH)]
bis(hydridooxygen)(O--O)
http://www.ebi.ac.uk/efo/EFO_0001553
H2O2
dioxidane
Oxydol
dihydrogen dioxide
HOOH
hydrogen peroxide
H(2)O(2)
Tomasz Adamusiak
floor plate rhombomere 5
ZFA:0000764
James Malone
The retroperitoneum (or extraperitoneum) is the anatomical space in the abdominal cavity behind (retro) the peritoneum. [wikipedia: http://en.wikipedia.org/wiki/Retroperitoneum]
retroperitoneum
http://sig.biostr.washington.edu/fma3.0#Retroperitoneal_space
retroperitoneum space
Bacteremia, NOS
Unspecified bacteremia
Unspecified bacteremia (context-dependent category)
Bacteremia NOS (disorder)
bacteremia
Unspecified bacteremia[accessedResource: DOID:2294][accessDate: 04-11-2010]
Bacteremia NOS (disorder)[accessedResource: DOID:2294][accessDate: 04-11-2010]
DOID:2294
Tomasz Adamusiak
Bacteremia, NOS[accessedResource: DOID:2294][accessDate: 04-11-2010]
Unspecified bacteraemia[accessedResource: DOID:2294][accessDate: 04-11-2010]
Unspecified bacteremia (context-dependent category)[accessedResource: DOID:2294][accessDate: 04-11-2010]
bacteremia[accessedResource: DOID:2294][accessDate: 04-11-2010]
Unspecified bacteraemia
Bacteremia (disorder)[accessedResource: DOID:2294][accessDate: 04-11-2010]
bacteriemia
Bacteremia (disorder)
DOID:5721
large cell neuroendocrine carcinoma
James Malone
A usually aggressive carcinoma composed of large malignant cells which display neuroendocrine characteristics. It is characterized by the presence of high mitotic activity and necrotic changes. The vast majority of cases are positive for neuron-specific enolase. Representative examples include lung, breast, cervical, and thymic neuroendocrine carcinomas.
Large cell neuroendocrine carcinoma (morphologic abnormality)
GeneRIF:12605092
NCIt:C6875
SNOMEDCT:128628002
GeneRIF:12711118
A usually aggressive carcinoma composed of large malignant cells which display neuroendocrine characteristics. It is characterized by the presence of high mitotic activity and necrotic changes. The vast majority of cases are positive for neuron-specific enolase. Representative examples include lung, breast, cervical, and thymic neuroendocrine carcinomas.[accessedResource: NCIt:C6875][accessDate: 04-11-2010]
Large cell neuroendocrine carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:128628002][accessDate: 04-11-2010]
James Malone
CS57923 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005164919&type=germplasm
CS57923
http://www.arabidopsis.org/servlets/TairObject?id=1005164919&type=germplasm
Tomasz Adamusiak
ILSXISS56/TejJ
http://jaxmice.jax.org/strain/009310.html
James Malone
R18
Jie Zheng
Tomasz Adamusiak
Theiler stage 28
birnlex_7083
A meter is a length unit which is equal to the length of the path traveled by light in vacuum during a time interval of 1/299 792 458 of a second.
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001685
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#m
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#m[accessedResource: MO_367][accessDate: 04-11-2010]
metre
MO_367
meter
Tomasz Adamusiak
m
true
James Malone
A length unit which is equal to the length of the path traveled by light in vacuum during a time interval of 1/299 792 458 of a second.
Tomasz Adamusiak
caudal tuberculum
ZFA:0000633
MAT:0000352
A filamentous extension of an epidermal cell near the tip of a rootlet that functions in absorption of water and minerals.nSpecialized unicellular trichome found in roots.[accessedResource: BTO:0001804][accessDate: 04-11-2010]
A filamentous extension of an epidermal cell near the tip of a rootlet that functions in absorption of water and minerals.nSpecialized unicellular trichome found in roots.
PO:0000256
root hair
BTO:0001804
James Malone
Shell region of nucleus accumbens[accessedResource: FMAID:77387][accessDate: 04-11-2010]
Tomasz Adamusiak
nucleus accumbens shell
FMAID:77387
birn_anat:nlx_anat_20090307
Shell region of nucleus accumbens
James Malone
CS57655 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158679&type=germplasm
CS57655
http://www.arabidopsis.org/servlets/TairObject?id=1005158679&type=germplasm
James Malone
An assay in which variation in the genome is analysed
genotyping
ArrayExpress production team
Ele Holloway
James Malone
true
1.8
Duplicate use EFO_0001260
obsolete_WI38
Squamous Cell Cancer[accessedResource: NCIt:C2929][accessDate: 04-11-2010]
GeneRIF:15184269
GeneRIF:12700631
GeneRIF:15197677
GeneRIF:12190814
GeneRIF:15328184
GeneRIF:14981901
GeneRIF:15161058
GeneRIF:16022908
Epidermoid Carcinomas[accessedResource: MSH:D002294][accessDate: 04-11-2010]
Squamous Cell Cancer
GeneRIF:15254691
Malignant Epidermoid Cell Neoplasm[accessedResource: NCIt:C2929][accessDate: 04-11-2010]
GeneRIF:11959846
GeneRIF:16201750
Squamous cell carcinoma, no ICD-O subtype (morphologic abnormality)
GeneRIF:12743035
GeneRIF:15817070
GeneRIF:15365571
GeneRIF:12447480
SCC - Squamous cell carcinoma
GeneRIF:14676801
GeneRIF:14707456
GeneRIF:15173661
GeneRIF:12479097
squamous cell carcinoma (morphologic abnormality)[accessedResource: DOID:1749][accessDate: 04-11-2010]
Squamous cell carcinoma, NOS
GeneRIF:14871981
GeneRIF:12060398
GeneRIF:15200479
GeneRIF:15776189
GeneRIF:14734465
GeneRIF:12792768
GeneRIF:16127291
GeneRIF:12269988
GeneRIF:11887018
GeneRIF:15001836
Epidermoid carcinoma, NOS
GeneRIF:12787042
GeneRIF:15567470
GeneRIF:15254682
GeneRIF:12841867
GeneRIF:12429789
GeneRIF:12969350
GeneRIF:15151617
GeneRIF:15551738
GeneRIF:14719077
GeneRIF:15180941
GeneRIF:15094779
GeneRIF:15375751
Squamous Cell Epithelioma[accessedResource: NCIt:C8999][accessDate: 04-11-2010]
GeneRIF:11920472
Carcinomas, Squamous Cell
Squamous cell carcinoma, no ICD-O subtype
GeneRIF:15205458
GeneRIF:14633701
GeneRIF:15254763
GeneRIF:14991744
GeneRIF:16172916
Carcinomas, Squamous[accessedResource: MSH:D002294][accessDate: 04-11-2010]
DOID:1749
GeneRIF:12851677
GeneRIF:14604894
GeneRIF:15930346
GeneRIF:12579497
GeneRIF:12632084
GeneRIF:12029498
GeneRIF:15774758
GeneRIF:12474056
GeneRIF:12413951
GeneRIF:14529662
GeneRIF:11836590
GeneRIF:12878090
GeneRIF:11982752
Squamous carcinoma[accessedResource: SNOMEDCT:28899001][accessDate: 04-11-2010]
GeneRIF:15061963
GeneRIF:14555508
Malignant Epidermoid Cell Tumor[accessedResource: NCIt:C2929][accessDate: 04-11-2010]
GeneRIF:15832405
Squamous cell carcinoma (disorder)
GeneRIF:15254686
GeneRIF:15390192
Squamous cell carcinoma (morphologic abnormality)
GeneRIF:12964017
GeneRIF:15526353
squamous carcinoma
GeneRIF:12860293
Carcinomas, Epidermoid
GeneRIF:12668285
Epidermoid Cell Cancer
Epidermoid Carcinoma[accessedResource: MSH:D002294][accessDate: 04-11-2010]
GeneRIF:15740587
GeneRIF:16091114
GeneRIF:15515019
GeneRIF:12681285
GeneRIF:12408753
GeneRIF:12565178
[M]Squamous cell carcinoma NOS[accessedResource: SNOMEDCT:189566008][accessDate: 04-11-2010]
Planocellular Carcinomas
GeneRIF:12929940
GeneRIF:11957139
GeneRIF:15625067
GeneRIF:14733907
GeneRIF:15033492
GeneRIF:12676577
GeneRIF:15767556
Epidermoid Carcinoma
James Malone
GeneRIF:15826242
Malignant Epidermoid Cell Tumor
GeneRIF:14997212
GeneRIF:15830715
GeneRIF:15609307
GeneRIF:15241500
GeneRIF:15568401
GeneRIF:12823440
Planocellular Carcinomas[accessedResource: MSH:D002294][accessDate: 04-11-2010]
GeneRIF:12527941
GeneRIF:12954496
squamous cell carcinoma NOS (morphologic abnormality)[accessedResource: DOID:1749][accessDate: 04-11-2010]
A carcinoma derived from stratified squamous epithelium. It may also occur in sites where glandular or columnar epithelium is normally present. (From Stedman, 25th ed)[accessedResource: MSH:D002294][accessDate: 04-11-2010]
Malignant Squamous Cell Neoplasm
GeneRIF:12599217
GeneRIF:15579456
GeneRIF:12115490
NCIt:C8999
GeneRIF:16035618
SNOMEDCT:402815007
GeneRIF:12670508
Squamous cell carcinoma, no ICD-O subtype[accessedResource: SNOMEDCT:28899001][accessDate: 04-11-2010]
GeneRIF:14961580
GeneRIF:15492752
GeneRIF:11814623
GeneRIF:14708636
[M]Squamous cell carcinoma NOS (morphologic abnormality)
GeneRIF:14607337
NCIt:C2929
GeneRIF:12824922
Planocellular Carcinoma
GeneRIF:11788901
A carcinoma arising from squamous epithelial cells. Morphologically, it is characterized by the proliferation of atypical, often pleomorphic squamous cells. Squamous cell carcinomas are graded by the degree of cellular differentiation as well, moderately, or poorly differentiated. Well differentiated carcinomas are usually associated with keratin production and the presence of intercellular bridges between adjacent cells. Representative examples are lung squamous cell carcinoma, skin squamous cell carcinoma, and cervical squamous cell carcinoma.
GeneRIF:14993646
GeneRIF:12579289
GeneRIF:16142392
A carcinoma derived from stratified squamous epithelium. It may also occur in sites where glandular or columnar epithelium is normally present. (From Stedman, 25th ed)
GeneRIF:14702179
GeneRIF:12720100
GeneRIF:15943786
GeneRIF:15328914
GeneRIF:15754018
GeneRIF:15878916
GeneRIF:12168821
GeneRIF:12452059
GeneRIF:15363037
GeneRIF:15870689
GeneRIF:12270344
GeneRIF:12926130
GeneRIF:15756447
GeneRIF:16327980
GeneRIF:15252855
GeneRIF:15184245
Squamous cell carcinoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:28899001][accessDate: 04-11-2010]
GeneRIF:16211299
GeneRIF:12841598
squamous cell carcinoma
GeneRIF:15585623
GeneRIF:15754020
GeneRIF:14676802
Squamous cell carcinoma, NOS[accessedResource: SNOMEDCT:28899001][accessDate: 04-11-2010]
GeneRIF:15662526
GeneRIF:15218300
GeneRIF:15329319
GeneRIF:15811118
GeneRIF:15201986
SCC - Squamous cell carcinoma[accessedResource: SNOMEDCT:28899001][accessDate: 04-11-2010]
GeneRIF:12958179
GeneRIF:12174890
GeneRIF:14604896
GeneRIF:12727836
Planocellular Carcinoma[accessedResource: MSH:D002294][accessDate: 04-11-2010]
Squamous cell epithelioma
GeneRIF:15920558
GeneRIF:15388813
GeneRIF:14985402
GeneRIF:12372346
GeneRIF:12169394
MSH:D002294
GeneRIF:14567988
GeneRIF:15059221
GeneRIF:14981906
GeneRIF:15638360
GeneRIF:14767526
A carcinoma arising from squamous epithelial cells. Morphologically, it is characterized by the proliferation of atypical, often pleomorphic squamous cells. Squamous cell carcinomas are graded by the degree of cellular differentiation as well, moderately, or poorly differentiated. Well differentiated carcinomas are usually associated with keratin production and the presence of intercellular bridges between adjacent cells. Representative examples are lung squamous cell carcinoma, skin squamous cell carcinoma, and cervical squamous cell carcinoma.[accessedResource: NCIt:C2929][accessDate: 04-11-2010]
squamous cell carcinoma NOS (morphologic abnormality)
GeneRIF:14750174
GeneRIF:15073598
GeneRIF:15709189
Epidermoid carcinoma, NOS[accessedResource: SNOMEDCT:28899001][accessDate: 04-11-2010]
GeneRIF:12115476
Malignant Squamous Cell Tumor
GeneRIF:14517347
squamous cell carcinoma (disorder)[accessedResource: DOID:1749][accessDate: 04-11-2010]
SNOMEDCT:28899001
Malignant Epidermoid Cell Neoplasm
GeneRIF:16024014
GeneRIF:11779227
GeneRIF:16012760
GeneRIF:11875739
Malignant Squamous Cell Tumor[accessedResource: NCIt:C2929][accessDate: 04-11-2010]
GeneRIF:12607604
GeneRIF:12738984
GeneRIF:15331608
GeneRIF:15217930
GeneRIF:12879021
Malignant Squamous Cell Neoplasm[accessedResource: NCIt:C2929][accessDate: 04-11-2010]
Carcinomas, Squamous Cell[accessedResource: MSH:D002294][accessDate: 04-11-2010]
GeneRIF:16077964
SNOMEDCT:189566008
GeneRIF:15816843
GeneRIF:12694349
GeneRIF:12174888
GeneRIF:14760079
GeneRIF:12722480
GeneRIF:12452003
GeneRIF:12194986
GeneRIF:15201990
[M]Squamous cell carcinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189566008][accessDate: 04-11-2010]
[M]Squamous cell carcinoma NOS
GeneRIF:12748469
GeneRIF:15856454
GeneRIF:11956617
GeneRIF:15170282
GeneRIF:13679863
GeneRIF:12112307
Squamous Carcinomas
Epidermoid Cell Cancer[accessedResource: NCIt:C2929][accessDate: 04-11-2010]
GeneRIF:11960918
GeneRIF:15140235
multi-fate stem cell
multipotent adult progenitor cell
CL:0000048
multi fate stem cell[accessedResource: CL:0000048][accessDate: 04-11-2010]
A stem cell that can give rise to mulitple lineages of cells.
multipotent stem cell
multifate stem cell[accessedResource: CL:0000048][accessDate: 04-11-2010]
A stem cell that can give rise to multiple lineages of cells.
Multipotent cell
Multipotent cell[accessedResource: CL:0000048][accessDate: 04-11-2010]
A stem cell that can give rise to multiple lineages of cells.[accessedResource: CL:0000048][accessDate: 04-11-2010]
James Malone
multifate stem cell
Ele Holloway
James Malone
NCI-H2171
FMAID:224850
prefrontal cortex
James Malone
The prefrontal cortex is the anterior part of the frontal lobes of the brain, lying in front of the motor and premotor areas.[accessedResource: BTO:0002807][accessDate: 04-11-2010]
Tomasz Adamusiak
Prefrontal association cortex
BTO:0002807
The prefrontal cortex is the anterior part of the frontal lobes of the brain, lying in front of the motor and premotor areas.
Prefrontal association cortex[accessedResource: FMAID:224850][accessDate: 04-11-2010]
CHEBI:35718
James Malone
http://www.ebi.ac.uk/efo/EFO_0001855
A substance that destroys fungi by suppressing their ability to grow or reproduce. Antifungal drugs differ from industrial fungicides in that they defend against fungi present in human or animal tissues.
antifungal drug
antifungal agent
antifungal drugs
Tomasz Adamusiak
visceral branch primordium
FBbt:00017003
Tomasz Adamusiak
granular eminence
ZFA:0000212
James Malone
Caudal is a geometric modifier which indicates a position towards the tail.
caudal
imidazole
1H-imidazole
288-32-4
29616
C3H4N2
gingiva[accessedResource: BTO:0000519][accessDate: 04-11-2010]
BTO:0000519
James Malone
The tissue that surrounds the necks of teeth and covers the alveolar parts of the jaws; broadly: the alveolar portion of a jaw with its enveloping soft tissues.
gingiva
The tissue that surrounds the necks of teeth and covers the alveolar parts of the jaws; broadly: the alveolar portion of a jaw with its enveloping soft tissues.[accessedResource: BTO:0000519][accessDate: 04-11-2010]
gum
NCIt:C32677
FMA:59762
The soft tissue surrounding the neck of individual teeth as well as covering the alveolar bone. The tissue is fibrous and continuous with the periodontal ligament and mucosal covering.[accessedResource: NCIt:C32677][accessDate: 04-11-2010]
The soft tissue surrounding the neck of individual teeth as well as covering the alveolar bone. The tissue is fibrous and continuous with the periodontal ligament and mucosal covering.
Arterial vessel
BTO:0000573
arterial system[accessedResource: ZFA:0000005][accessDate: 04-11-2010]
MAT:0000034
Arterial vessel[accessedResource: FMAID:50720][accessDate: 04-11-2010]
MFO:0002900
MA:0000061
ZFA:0000005
Any of the tubular branching muscular- and elastic-walled vessels that carry blood from the heart through the body.[accessedResource: BTO:0000573][accessDate: 04-11-2010]
Vessels that carry blood away from the heart.[accessedResource: ZFA:0000005][accessDate: 04-11-2010]
Arterial subtree[accessedResource: FMAID:50720][accessDate: 04-11-2010]
Subdivision of arterial tree (organ) which consists of branching sets of tubes (arterial trunk) that form a tree; together with other arterial trees (organ part), it constitutes an arterial tree (organ). Examples: pulmonary arterial tree, right coronary arterial tree, superior mesenteric tree.
EHDAA:396
TAO:0000005
EV:0100026
artery
Vessels that carry blood away from the heart.
James Malone
arterial system
FMAID:50720
Arterial tree organ part
XAO:0000114
Arterial tree organ part[accessedResource: FMAID:50720][accessDate: 04-11-2010]
Arterial subtree
EMAPA:16201
Any of the tubular branching muscular- and elastic-walled vessels that carry blood from the heart through the body.
a primitive plant body of gametophytes that has not differentiated into roots, stems or leaves[accessedResource: MAT:0000248][accessDate: 04-11-2010]
a primitive plant body of gametophytes that has not differentiated into roots, stems or leaves
James Malone
BTO:0001366
thallus
A plant body that is characteristic of thallophytes , lacks differentiation into distinct members (as stem, leaves, and roots), and does not grow from an apical point.
MAT:0000248
A plant body that is characteristic of thallophytes , lacks differentiation into distinct members (as stem, leaves, and roots), and does not grow from an apical point.[accessedResource: BTO:0001366][accessDate: 04-11-2010]
Ele Holloway
AZ521
JCRB0061
James Malone
AZ-521
James Malone
CS57722 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158746&type=germplasm
CS57722
http://www.arabidopsis.org/servlets/TairObject?id=1005158746&type=germplasm
EV:0100382
FBbt:00005065
fat tissue
adipose system[accessedResource: FBbt:00005065][accessDate: 04-11-2010]
adipose system
Connective tissue in which fat is stored and which has the cells distended by droplets of fat.
James Malone
The system of organs and cells involved in fat storage.
MA:0000009
The system of organs and cells involved in fat storage.[accessedResource: FBbt:00005065][accessDate: 04-11-2010]
BTO:0001487
adipose tissue[accessedResource: BTO:0001487][accessDate: 04-11-2010]
An organ system pertaining to fat.
adipose tissue
Connective tissue in which fat is stored and which has the cells distended by droplets of fat.[accessedResource: BTO:0001487][accessDate: 04-11-2010]
SAEL:2
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#secreted_protein_identification_design[accessedResource: MO_694][accessDate: 04-11-2010]
Tomasz Adamusiak
secreted protein identification design
MO_694
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#secreted_protein_identification_design
James Malone
Lateral is a geometric modifier describing something which is of or pertaining to the side.
lateral
MAT:0000488
true
obsolete_pretreatment
Tomasz Adamusiak
atrioventricular ring
ZFA:0005073
Ele Holloway
James Malone
somatomotor cortex
primary motor cortex
Tomasz Adamusiak
hypopharyngeal sense organ primordium
FBbt:00016001
CASRN:5589-96-8
bromochloroacetic acid
James Malone
Tomasz Adamusiak
DSSTox_Generic_SID:24642
Ele Holloway
BCA; bromochloroacetate
STRUCTURE_Formula:C2H2BrClO2
STRUCTURE_ChemicalName_IUPAC:bromo(chloro)acetic acid
DSSTox_CID:4642
Tomasz Adamusiak
ventral midline neuroblast
FBbt:00005565
A large, oval stomach epithelial cell with a central nucleus; source of gastric acid. Secretes HCl.
CL:0000162
A large, oval stomach epithelial cell with a central nucleus; source of gastric acid. Secretes HCl.[accessedResource: CL:0000162][accessDate: 04-11-2010]
oxyntic cell
parietal cell
oxyntic cell[accessedResource: CL:0000162][accessDate: 04-11-2010]
James Malone
The human melanoma cell line M14 has been established from surgically removed melanoma metastases.[accessedResource: BTO:0002805][accessDate: 04-11-2010]
The human melanoma cell line M14 has been established from surgically removed melanoma metastases.
M14 cell[accessedResource: BTO:0002805][accessDate: 04-11-2010]
BTO:0002805
M14 cell
Tomasz Adamusiak
M14
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mg_per_kg_per_day[accessedResource: MO_353][accessDate: 04-11-2010]
milligram per kilogram per day
MO_353
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Microgram_per_Kilogram_per_Day
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mg_per_kg_per_day
Tomasz Adamusiak
gonad primordium
ZFA:0001262
Ele Holloway
James Malone
NCI-H2195
James Malone
A biopsy number is an information entity about the numerical label given to a partciular biopsy obtained.
biopsy number
James Malone
DSSTox_CID:22580
DSSTox_Generic_SID:42580
CASRN:85379-09-5
(+)-AJ 76 hydrochloride
(1S,2R)-cis-5-methoxy-1-methyl-2-(N-propylamino)tetrali n hydrochloride
Tomasz Adamusiak
STRUCTURE_Formula:C15H24ClNO
STRUCTURE_ChemicalName_IUPAC:(1S,2R)-5-methoxy-1-methyl-N-propyl-1,2,3,4-tetrahydronaphthalen-2-amine hydrochloride
Ele Holloway
picometre
A length unit which is equal to 10^[-12] m.
picometer
UO:0000020
http://www.ebi.ac.uk/efo/EFO_0001722
true
James Malone
A picometer is a length unit which is equal to 1m x 10^-12.
pm
3-(10,11-dihydro-5H-dibenzo(a,d)cyclohepten-5-ylidene)-N,N-dimethyl-1-propanamine
5-(gamma-dimethylaminopropylidene)-5H-dibenzo[a,d][1,4]cycloheptadiene
3-(10,11-dihydro-5H-dibenzo[a,d][7]annulen-5-ylidene)-N,N-dimethylpropan-1-amine
Amitriptylin
CN(C)CCC=C1c2ccccc2CCc2ccccc12
CHEBI:2666
5-(3-dimethylaminopropylidene)-10,11-dihydro-5H-dibenzo(a,d)cycloheptene
C20H23N
InChI=1/C20H23N/c1-21(2)15-7-12-20-18-10-5-3-8-16(18)13-14-17-9-4-6-11-19(17)20/h3-6,8-12H,7,13-15H2,1-2H3
5-(3-dimethylaminopropylidene)-10,11-dihydro-5H-dibenzo(a,d)cycloheptatriene
InChIKey=KRMDCWKBEZIMAB-UHFFFAOYAI
http://www.ebi.ac.uk/efo/EFO_0001483
10,11-dihydro-5-(gamma-dimethylaminopropylidene)-5H-dibenzo(a,d)cycloheptene
James Malone
3-(10,11-dihydro-5H-dibenzo[a,d]cyclohepten-5-ylidene)-N,N-dimethylpropan-1-amine
10,11-dihydro-N,N-dimethyl-5H-dibenzo(a,d)heptalene-Delta(5),gamma-propylamine
amitriptyline
A tricyclic antidepressant that has formula C20H23N.
DSSTox_Generic_SID:23207
STRUCTURE_ChemicalName_IUPAC:(2S)-2-(2-oxopyrrolidin-1-yl)butanamide
Tomasz Adamusiak
James Malone
STRUCTURE_Formula:C8H14N2O2
CASRN:102767-28-2
DSSTox_CID:3207
Ele Holloway
levetiracetam
ZEA:0015150
OntologyMappingImporter following MAT:0000220
MAT:0000220
PO:0020147
apical root meristem
James Malone
epithelial
NIFSTD:sao441624014
Tomasz Adamusiak
Epitheliocyte[accessedResource: CL:0000066][accessDate: 04-11-2010]
Cell that line the inner and outer surfaces of the body by forming cellular layers (epithelium) or masses (MSH).[accessedResource: NIFSTD:sao441624014][accessDate: 04-11-2010]
A cell that is usually found in a two-dimensional sheet with a free surface.
A cell that is usually found in a two-dimensional sheet with a free surface. The cell has a cytoskeleton that allows for tight cell to cell contact and for cell polarity where apical part is directed towards the lumen and the basal part to the basal lamina.[accessedResource: CL:0000066][accessDate: 04-11-2010]
Cell that line the inner and outer surfaces of the body by forming cellular layers (epithelium) or masses (MSH).
James Malone
epithelial cell
A cell that is usually found in a two-dimensional sheet with a free surface. The cell has a cytoskeleton that allows for tight cell to cell contact and for cell polarity where apical part is directed towards the lumen and the basal part to the basal lamina.
CL:0000066
BTO:0000414
Epitheliocyte
Cell that cover the surface of the body and line its cavities.
Cell that cover the surface of the body and line its cavities.[accessedResource: BTO:0000414][accessDate: 04-11-2010]
(2R)-3,4-dihydro-2,7,8-trimethyl-2-[(4R,8R)-4,8,12-trimethyltridecyl]-2H-1-benzopyran-6-ol
A tocopherol that has formula C28H48O2.
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0002729
InChIKey=QUEDXNHFTDJVIY-DQCZWYHMBO
D-gamma-tocopherol
Tomasz Adamusiak
(2R)-2,7,8-trimethyl-2-[(4R,8R)-4,8,12-trimethyltridecyl]-3,4-dihydro-2H-chromen-6-ol
CHEBI:18185
gamma-tocopherol
InChI=1/C28H48O2/c1-20(2)11-8-12-21(3)13-9-14-22(4)15-10-17-28(7)18-16-25-19-26(29)23(5)24(6)27(25)30-28/h19-22,29H,8-18H2,1-7H3/t21-,22-,28-/m1/s1
7,8-dimethyltocol
C28H48O2
CC(C)CCC[C@@H](C)CCC[C@@H](C)CCC[C@]1(C)CCc2cc(O)c(C)c(C)c2O1
James Malone
blastula 30%-epiboly
ZFS:0000016
nucleus subthalamicus
A biconvex mass of gray matter on the medial side of the junction of the internal capsule and the crus cerebri; its chief connections are with the globus pallidus.[accessedResource: BTO:0002252][accessDate: 04-11-2010]
NCIt:C12454
nucleus subthalamicus[accessedResource: BTO:0002252][accessDate: 04-11-2010]
subthalamic nucleus
James Malone
nucleus of Luys
Luys' body[accessedResource: BTO:0002252][accessDate: 04-11-2010]
Lens-shaped structure on the inner aspect of the internal capsule. The subthalamic nucleus and pathways traversing this region are concerned with the integration of somatic motor function. (MeSH)
Luys' body
nucleus of Luys[accessedResource: BTO:0002252][accessDate: 04-11-2010]
BTO:0002252
A biconvex mass of gray matter on the medial side of the junction of the internal capsule and the crus cerebri; its chief connections are with the globus pallidus.
Lens-shaped structure on the inner aspect of the internal capsule. The subthalamic nucleus and pathways traversing this region are concerned with the integration of somatic motor function. (MeSH)[accessedResource: NCIt:C12454][accessDate: 04-11-2010]
Tomasz Adamusiak
ovarian follicle stage II
ZFA:0001265
James Malone
Tomasz Adamusiak
atmosphere
MO_498
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#atmosphere
The atmospheric conditions used to culture or grow an organism.
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#atmosphere[accessedResource: MO_498][accessDate: 04-11-2010]
primary antiphospholipid syndrome
antiphospholipid syndrome
antiphospholipid antibody syndrome
Antiphospholipid syndrome[accessedResource: DOID:2988][accessDate: 04-11-2010]
Antiphospholipid syndrome (disorder)[accessedResource: DOID:2988][accessDate: 04-11-2010]
antiphospholipid antibody syndrome[accessedResource: DOID:2988][accessDate: 04-11-2010]
DOID:2988
Antiphospholipid syndrome (disorder)
antiphospholipid syndrome
A large dorsally projecting part of the brain concerned especially with the coordination of muscles and the maintenance of bodily equilibrium, situated between the brain stem and the back of the cerebrum , and formed in humans of two lateral lobes and a median lobe.[accessedResource: BTO:0000232][accessDate: 04-11-2010]
The portion of the brain located at the base of the skull that is responsible for balance, equilibrium and movement.[accessedResource: NCIt:C12445][accessDate: 04-11-2010]
Cerebellar[accessedResource: NCIt:C12445][accessDate: 04-11-2010]
NIFSTD:birnlex_1489
Tomasz Adamusiak
Cerebellar
NCIt:C12445
James Malone
The portion of the brain located at the base of the skull that is responsible for balance, equilibrium and movement.
cerebellum
A large dorsally projecting part of the brain concerned especially with the coordination of muscles and the maintenance of bodily equilibrium, situated between the brain stem and the back of the cerebrum , and formed in humans of two lateral lobes and a median lobe.
BTO:0000232
Tomasz Adamusiak
chondrocranium cartilage
ZFA:0001461
true
Use of spiked in controls in a measurement of the spiked in external/internal ratio
external control ratio
HuNS1
James Malone
HuNS-1
Ele Holloway
DSSTox_Generic_SID:24159
isoxaben
STRUCTURE_Formula:C18H24N2O4
CASRN:82558-50-7
James Malone
DSSTox_CID:4159
Ele Holloway
STRUCTURE_ChemicalName_IUPAC:N-[3-(1-ethyl-1-methylpropyl)isoxazol-5-yl]-2,6-dimethoxybenzamide
Tomasz Adamusiak
Ele Holloway
James Malone
NCI-H1573
Ele Holloway
James Malone
Tomasz Adamusiak
4,4',4''-(4-propyl-[1H]-pyrazole-1,3,5-triyl)trisphenol
CASRN:263717-53-9
DSSTox_CID:40392
PPT
Tomasz Adamusiak
mesophyll cell
PO:0004006
Tomasz Adamusiak
rhombomere 1
ZFA:0001031
Tomasz Adamusiak
pectoral fin bud
ZFA:0000141
James Malone
Neoral
CHEBI:4031
Antibiotic S 7481F1
ciclosporina
Ciclosporin
C62H111N11O12
InChIKey=PMATZTZNYRCHOR-MDVWSCMIDT
cyclosporin A
A cyclic nonribosomal peptide of eleven amino acids; an immunosuppressant drug widely used in post-allogeneic organ transplant to reduce the activity of the patient's immune system, and therefore the risk of organ rejection.
A homodetic cyclic peptide that has formula C62H111N11O12.
30-ethyl-33-[(4E)-1-hydroxy-2-methylhex-4-en-1-yl]-6,9,18,24-tetraisobutyl-3,21-diisopropyl-1,4,7,10,12,15,19,25,28-nonamethyl-1,4,7,10,13,16,19,22,25,28,31-undecaazacyclotritriacontane-2,5,8,11,14,17,20,23,26,29,32-undecone
1,11-cyclo[L-alanyl-D-alanyl-N-methyl-L-leucyl-N-methyl-L-leucyl-N-methyl-L-valyl-(E)-(2S,3R,4R)-2-amino-3-hydroxy-N,4-dimethyloct-6-enoyl-L-2-aminobutanoyl-N-methylglycyl-N-methyl-L-leucyl-L-valyl-N-methyl-L-leucine]
30-ethyl-33-[(4E)-1-hydroxy-2-methylhex-4-en-1-yl]-1,4,7,10,12,15,19,25,28-nonamethyl-6,9,18,24-tetrakis(2-methylpropyl)-3,21-bis(propan-2-yl)-1,4,7,10,13,16,19,22,25,28,31-undecaazacyclotritriacontane-2,5,8,11,14,17,20,23,26,29,32-undecone
Cyclosporine
ciclosporinum
InChI=1/C62H111N11O12/c1-25-27-28-40(15)52(75)51-56(79)65-43(26-2)58(81)67(18)33-48(74)68(19)44(29-34(3)4)55(78)66-49(38(11)12)61(84)69(20)45(30-35(5)6)54(77)63-41(16)53(76)64-42(17)57(80)70(21)46(31-36(7)8)59(82)71(22)47(32-37(9)10)60(83)72(23)50(39(13)14)62(85)73(51)24/h25,27,34-47,49-52,75H,26,28-33H2,1-24H3,(H,63,77)(H,64,76)(H,65,79)(H,66,78)/b27-25+/t40-,41+,42+,43-,44+,45-,46+,47+,49+,50-,51+,52-/m1/s1/f/h63-66H
Sandimmune
ciclosporine
Gengraf
http://www.ebi.ac.uk/efo/EFO_0001506
CC[C@H]1NC(=O)[C@H]([C@H](O)[C@H](C)C\\C=C\\C)N(C)C(=O)[C@@H](C(C)C)N(C)C(=O)[C@H](CC(C)C)N(C)C(=O)[C@H](CC(C)C)N(C)C(=O)[C@H](C)NC(=O)[C@H](C)NC(=O)[C@@H](CC(C)C)N(C)C(=O)[C@@H](NC(=O)[C@H](CC(C)C)N(C)C(=O)CN(C)C1=O)C(C)C
Cyclo(L-alanyl-D-alanyl-N-methyl-L-leucyl-N-methyl-L-leucyl-N-methyl-L-valyl-((3R,4R,6E)-6,7-didehydro-3-hydroxy-N,4-dimethyl-L-2-aminooctanoyl)-L-2-aminobutanoyl-N-methylglycyl-N-methyl-L-leucyl-L-valyl-N-methylleucyl)
(R-[R*,R*-(E)])-Cyclic(L-alanyl-D-alanyl-N-methyl-L-leucyl-N-methyl-L-leucyl-N-methyl-L-valyl-3-hydroxy-N,4-dimethyl-L-2-amino-6-octenoyl-L-alpha-aminobutyryl-N-methylglycyl-N-methyl-L-leucyl-L-valyl-N-methyl-L-leucyl)
true
information content entity
An information entity is an entity that represents information about some other entity. For example, a measurement, a clustered data set.
information
James Malone
information entity
http://www.ebi.ac.uk/efo/EFO_0001435
an information content entity is an entity that is generically dependent on some artifact and stands in relation of aboutness to some entity
Ele Holloway
BC-1
BC1
James Malone
James Malone
Tomasz Adamusiak
lymphoid neoplasm
blood cancer
hematological cancer
hematological neoplasm
CHEBI:35472
James Malone
http://www.ebi.ac.uk/efo/EFO_0001837
A substance that reduces or suppresses inflammation.
anti-inflammatory drug
anti-inflammatory agent
anti-inflammatory drugs
James Malone
GLI60
mefloquine
James Malone
DSSTox_Generic_SID:37168
DSSTox_CID:17168
Tomasz Adamusiak
STRUCTURE_ChemicalName_IUPAC:(S)-[2,8-bis(trifluoromethyl)quinolin-4-yl][(2R)-piperidin-2-yl]methanol
CASRN:53230-10-7
Ele Holloway
STRUCTURE_Formula:C17H16F6N2O
GeneRIF:15248378
GeneRIF:15052696
Inflammation of the COLON that is predominantly confined to the MUCOSA. Its major symptoms include DIARRHEA, rectal BLEEDING, the passage of MUCUS, and ABDOMINAL PAIN.[accessedResource: MSH:D003093][accessDate: 04-11-2010]
GeneRIF:15628695
GeneRIF:14669348
GeneRIF:16015687
ulcerative colitis (disorder)[accessedResource: DOID:8577][accessDate: 04-11-2010]
GeneRIF:12109441
GeneRIF:12878361
GeneRIF:15973119
GeneRIF:11987129
GeneRIF:12133437
GeneRIF:12842452
GeneRIF:12512026
GeneRIF:15007304
Other ulcerative colitis[accessedResource: DOID:8577][accessDate: 04-11-2010]
ULCERATVE COLITIS UNSPCF[accessedResource: ICD9:556.9][accessDate: 04-11-2010]
GeneRIF:15146247
GeneRIF:12133438
James Malone
ICD9:556
Left-sided ulcerative colitis[accessedResource: DOID:8577][accessDate: 04-11-2010]
DOID:8577
GeneRIF:12707342
UC - ulcerative colitis[accessedResource: DOID:8577][accessDate: 04-11-2010]
GeneRIF:15550998
GeneRIF:14597776
ULCERATVE COLITIS UNSPCF
Inflammation of the COLON that is predominantly confined to the MUCOSA. Its major symptoms include DIARRHEA, rectal BLEEDING, the passage of MUCUS, and ABDOMINAL PAIN.
GeneRIF:12598727
GeneRIF:12617879
GeneRIF:12725330
GeneRIF:12139949
GeneRIF:12011151
GeneRIF:15188158
GeneRIF:15284119
Left-sided ulcerative colitis
GeneRIF:15793859
GeneRIF:14731353
Other ulcerative colitis
GeneRIF:14611908
GeneRIF:11904678
GeneRIF:12112311
GeneRIF:15046221
Other ulcerative colitis (disorder)[accessedResource: DOID:8577][accessDate: 04-11-2010]
GeneRIF:15946916
GeneRIF:11956656
UC - ulcerative colitis
GeneRIF:15292938
GeneRIF:15655821
GeneRIF:11920497
GeneRIF:14617036
GeneRIF:15935984
GeneRIF:15188166
ICD9:556.9
GeneRIF:16158332
GeneRIF:15685540
GeneRIF:11953203
GeneRIF:12572877
GeneRIF:15905704
GeneRIF:12486609
Left-sided ulcerative (chronic) colitis[accessedResource: DOID:8577][accessDate: 04-11-2010]
GeneRIF:16149136
GeneRIF:14627676
GeneRIF:12465728
MSH:D003093
GeneRIF:11737306
GeneRIF:12730867
GeneRIF:15288468
ulcerative colitis
GeneRIF:15755919
GeneRIF:15102868
Left-sided ulcerative (chronic) colitis
GeneRIF:12100519
GeneRIF:14525977
GeneRIF:12460892
GeneRIF:15944317
ulcerative colitis (disorder)
Other ulcerative colitis (disorder)
Ulcerative colitis, unspecified
Ulcerative colitis, unspecified[accessedResource: ICD9:556.9][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#arrayer[accessedResource: MO_697][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0002016
An arrayer is an instrument which deposits biological material onto a substrate in a defined pattern.
arrayer
MO_697
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#arrayer
BTO:0000817
Lactiferous gland
mamma
Lobe of mammary gland
EV:0100125
glandula mammaria
MA:0000145
MAT:0000073
FMAID:62088
EHDAA:6522
EMAPA:17759
James Malone
The specialized accessory gland of the skin of female mammals that secretes milk. In the human female, it is a compound tubuloalveolar gland composed of 15 to 25 lobes arranged radially about the nipple and separated by connective and adipose tissue, each lobe having its own excretory (lactiferous) duct opening on the nipple. The lobes are subdivided into lobules, with the alveolar ducts and alveoli being the secretory portion of the gland.
Lobular organ which consist of a lactiferous duct tree and the set of lactiferous acini that are connected to duct tree. Examples: There are variable numbers of lactiferous duct trees.
Lactiferous gland[accessedResource: FMAID:62088][accessDate: 04-11-2010]
glandula mammaria[accessedResource: BTO:0000817][accessDate: 04-11-2010]
The specialized accessory gland of the skin of female mammals that secretes milk. In the human female, it is a compound tubuloalveolar gland composed of 15 to 25 lobes arranged radially about the nipple and separated by connective and adipose tissue, each lobe having its own excretory (lactiferous) duct opening on the nipple. The lobes are subdivided into lobules, with the alveolar ducts and alveoli being the secretory portion of the gland.[accessedResource: BTO:0000817][accessDate: 04-11-2010]
Lobe of breast
SAEL:64
mammary gland
mamma[accessedResource: BTO:0000817][accessDate: 04-11-2010]
The middle portion of the brainstem located between the midbrain and the medulla oblongata. The fourth ventricle lies dorsal to the pons which also contains the motor trigeminal nuclei and the abducens nuclei. The cerebellum contributes a large number of afferent fibers to the pons.
Pons Cerebelli[accessedResource: NCIt: C12511][accessDate: 04-11-2010]
Tomasz Adamusiak
The middle portion of the brainstem located between the midbrain and the medulla oblongata. The fourth ventricle lies dorsal to the pons which also contains the motor trigeminal nuclei and the abducens nuclei. The cerebellum contributes a large number of afferent fibers to the pons.[accessedResource: NCIt: C12511][accessDate: 04-11-2010]
Pons Varolii[accessedResource: NCIt: C12511][accessDate: 04-11-2010]
Pons Varolii
Pons Cerebelli
A broad mass of chiefly transverse nerve fibers conspicuous on the ventral surface of the brain of man and lower mammals at the anterior end of the medulla oblongata.
James Malone
NCIt: C12511
A broad mass of chiefly transverse nerve fibers conspicuous on the ventral surface of the brain of man and lower mammals at the anterior end of the medulla oblongata.[accessedResource: BTO:0001101][accessDate: 04-11-2010]
BTO:0001101
NIFSTD:birnlex_733
pons
cortex is ambiguous as class under brain so removed
Tomasz Adamusiak
NIFSTD:birnlex_1494
Cerebral Cortex
brain cortex
The surface layer of gray matter of the cerebrum that functions chiefly in coordination of sensory and motor information.
NCIt:C12443
Cortical[accessedResource: NCIt:C12443][accessDate: 10-05-2010]
Cerebral Cortex[accessedResource: NCIt:C12443][accessDate: 10-05-2010]
Cortex
true
BTO:0000233
James Malone
1.8
The surface layer of gray matter of the cerebrum that functions chiefly in coordination of sensory and motor information.[accessedResource: BTO:0000233][accessDate: 10-05-2010]
Cortical
brain cortex[accessedResource: BTO:0000233][accessDate: 10-05-2010]
Cortex[accessedResource: NCIt:C12443][accessDate: 10-05-2010]
obsolete_cortex
Jie Zheng
Tomasz Adamusiak
Theiler stage 17
birnlex_7072
Jie Zheng
Tomasz Adamusiak
gastrula 80%-epiboly
InChI=1/O3/c1-3-2
trioxygen
ozone
CHEBI:25812
[O-][O+]=O
Ozon
Trisauerstoff
O3
[OO2]
http://www.ebi.ac.uk/efo/EFO_0002676
trioxygene
ozono
A triatomic oxygen that has formula O3.
InChIKey=CBENFWSGALASAD-UHFFFAOYAY
A malignant mixed tumor that affects the kidneys and typically occurs in children.
Nephroblastoma NOS[accessedResource: DOID:2154][accessDate: 04-11-2010]
Nephroblastoma (morphologic abnormality)
Nephroblastoma (morphologic abnormality)[accessedResource: DOID:2154][accessDate: 04-11-2010]
Nephroblastoma (disorder)
nephroblastoma
Tomasz Adamusiak
renal Wilms tumor[accessedResource: DOID:2154][accessDate: 04-11-2010]
DOID:2154
nephroblastoma[accessedResource: DOID:2154][accessDate: 04-11-2010]
Nephroblastoma (disorder)[accessedResource: DOID:2154][accessDate: 04-11-2010]
A malignant mixed tumor that affects the kidneys and typically located_in children.
A malignant mixed tumor that affects the kidneys and typically located_in children.[accessedResource: DOID:2154][accessDate: 04-11-2010]
Nephroblastoma NOS
Wilms tumor
renal Wilms tumor
Formerly class "current milliamperes"
James Malone
The measure of movement of electrical charges in a conductor measured in milliamperes.
electrical current
Tomasz Adamusiak
Rohon-Beard neuron
ZFA:0009150
James Malone
L3055
GeneRIF:15068254
Complete trisomy 21 syndrome (disorder)
Down's syndrome - trisomy 21[accessedResource: DOID:14250][accessDate: 04-11-2010]
GeneRIF:15255950
Complete trisomy 21 syndrome (disorder)[accessedResource: DOID:14250][accessDate: 04-11-2010]
Complete trisomy 21 syndrome[accessedResource: SNOMEDCT:41040004][accessDate: 04-11-2010]
GeneRIF:11771751
GeneRIF:14636651
GeneRIF:15820773
GeneRIF:11810642
GeneRIF:15694837
T21 - Trisomy 21
GeneRIF:12499044
GeneRIF:11771758
GeneRIF:11771746
GeneRIF:12931206
GeneRIF:15068245
Trisomy 21 (Down Syndrome)Downs SyndromeTrisomy 21 Syndrome[accessedResource: NCIt:C2993][accessDate: 04-11-2010]
Trisomy 21, Meiotic Nondisjunction[accessedResource: MSH:D004314][accessDate: 04-11-2010]
GeneRIF:11771750
GeneRIF:12586620
Trisomy 21 NOS
Trisomy 21
G Trisomy[accessedResource: DOID:14250][accessDate: 04-11-2010]
GeneRIF:11771738
GeneRIF:15946822
GeneRIF:12957488
Tomasz Adamusiak
GeneRIF:11771749
GeneRIF:15082224
GeneRIF:12529699
GeneRIF:15068244
trisomy 21 syndrome
GeneRIF:12628594
James Malone
GeneRIF:12032275
GeneRIF:12080391
GeneRIF:15068239
GeneRIF:14701734
GeneRIF:15068237
Trisomy 21, Mitotic Nondisjunction
GeneRIF:12109594
Down's syndrome NOS
DOWN'S SYNDROME
T21 - Trisomy 21[accessedResource: SNOMEDCT:41040004][accessDate: 04-11-2010]
GeneRIF:15068241
GeneRIF:15184603
GeneRIF:15358155
GeneRIF:15103709
GeneRIF:12923861
SNOMEDCT:254263008
ICD9:758.0
A chromosome disorder associated either with an extra chromosome 21 or an effective trisomy for chromosome 21. Clinical manifestations include hypotonia, short stature, brachycephaly, upslanting palpebral fissures, epicanthus, Brushfield spots on the iris, protruding tongue, small ears, short, broad hands, fifth finger clinodactyly, Simian crease, and moderate to severe MENTAL RETARDATION. Cardiac and gastrointestinal malformations, a marked increase in the incidence of LEUKEMIA, and the early onset of ALZHEIMER DISEASE are also associated with this condition. Pathologic features include the development of NEUROFIBRILLARY TANGLES in neurons and the deposition of AMYLOID BETA-PROTEIN, similar to the pathology of ALZHEIMER DISEASE. (Menkes, Textbook of Child Neurology, 5th ed, p213)
GeneRIF:12400059
GeneRIF:12796830
A chromosomal dysgenesis syndrome resulting from a triplication or translocation of chromosome 21. Down syndrome occurs in approximately 1:700 live births. Abnormalities are variable from individual to individual and may include mental retardation, retarded growth, flat hypoplastic face with short nose, prominent epicanthic skin folds, small low-set ears with prominent antihelix, fissured and thickened tongue, laxness of joint ligaments, pelvic dysplasia, broad hands and feet, stubby fingers, transverse palmar crease, lenticular opacities and heart disease. Patients with Down syndrome have an estimated 10 to 30-fold increased risk for leukemia; most have symptoms of Alzheimer's disease by age 40. Also known as trisomy 21 syndrome. --2004
GeneRIF:16222229
GeneRIF:12393509
DOID:14250
GeneRIF:11771757
GeneRIF:14678752
GeneRIF:12172547
Complete trisomy 21 syndrome
GeneRIF:12070657
GeneRIF:14738882
MSH:D004314
GeneRIF:11879646
GeneRIF:12816863
Down's syndrome NOS[accessedResource: SNOMEDCT:254263008][accessDate: 04-11-2010]
GeneRIF:12515899
GeneRIF:12650976
GeneRIF:12895444
NCIt:C2993
GeneRIF:11771736
G Trisomy
GeneRIF:12200143
GeneRIF:15804423
GeneRIF:12767918
GeneRIF:16231093
Down Syndrome, Partial Trisomy 21[accessedResource: MSH:D004314][accessDate: 04-11-2010]
Trisomy 21, Meiotic Nondisjunction
GeneRIF:15068242
GeneRIF:14656875
GeneRIF:12771203
GeneRIF:16274669
Down's syndrome NOS (disorder)
Mongolism[accessedResource: MSH:D004314][accessDate: 04-11-2010]
GeneRIF:14615042
Down Syndrome, Partial Trisomy 21
GeneRIF:11771762
A chromosomal dysgenesis syndrome resulting from a triplication or translocation of chromosome 21. Down syndrome occurs in approximately 1:700 live births. Abnormalities are variable from individual to individual and may include mental retardation, retarded growth, flat hypoplastic face with short nose, prominent epicanthic skin folds, small low-set ears with prominent antihelix, fissured and thickened tongue, laxness of joint ligaments, pelvic dysplasia, broad hands and feet, stubby fingers, transverse palmar crease, lenticular opacities and heart disease. Patients with Down syndrome have an estimated 10 to 30-fold increased risk for leukemia; most have symptoms of Alzheimer's disease by age 40. Also known as trisomy 21 syndrome. --2004[accessedResource: NCIt:C2993][accessDate: 04-11-2010]
Trisomy 21, Mitotic Nondisjunction[accessedResource: MSH:D004314][accessDate: 04-11-2010]
A chromosome disorder associated either with an extra chromosome 21 or an effective trisomy for chromosome 21. Clinical manifestations include hypotonia, short stature, brachycephaly, upslanting palpebral fissures, epicanthus, Brushfield spots on the iris, protruding tongue, small ears, short, broad hands, fifth finger clinodactyly, Simian crease, and moderate to severe MENTAL RETARDATION. Cardiac and gastrointestinal malformations, a marked increase in the incidence of LEUKEMIA, and the early onset of ALZHEIMER DISEASE are also associated with this condition. Pathologic features include the development of NEUROFIBRILLARY TANGLES in neurons and the deposition of AMYLOID BETA-PROTEIN, similar to the pathology of ALZHEIMER DISEASE. (Menkes, Textbook of Child Neurology, 5th ed, p213)[accessedResource: MSH:D004314][accessDate: 04-11-2010]
GeneRIF:12459318
GeneRIF:15661359
GeneRIF:11856873
Down's syndrome[accessedResource: ICD9:758.0][accessDate: 04-11-2010]
GeneRIF:11331941
GeneRIF:11565556
GeneRIF:11824616
GeneRIF:15169762
GeneRIF:11771745
GeneRIF:11771755
Trisomy 21 (Down Syndrome)Downs SyndromeTrisomy 21 Syndrome
Down's syndrome - trisomy 21
GeneRIF:12943237
GeneRIF:14512321
Trisomy 21[accessedResource: MSH:D004314][accessDate: 04-11-2010]
NIFSTD:nlx_dys_20090502
GeneRIF:12359327
GeneRIF:11771735
A disorder caused by the presence of all or part of an extra 21st chromosome, characterized by structural abnormalities throughout the body. Often Down syndrome is associated with some impairment of cognitive ability and physical growth as well as facial appearance. (Adapted from Wikipedia)
Down's syndrome NOS (disorder)[accessedResource: SNOMEDCT:254263008][accessDate: 04-11-2010]
SNOMEDCT:41040004
GeneRIF:12469345
GeneRIF:15068251
A disorder caused by the presence of all or part of an extra 21st chromosome, characterized by structural abnormalities throughout the body. Often Down syndrome is associated with some impairment of cognitive ability and physical growth as well as facial appearance. (Adapted from Wikipedia)[accessedResource: NIFSTD:nlx_dys_20090502][accessDate: 04-11-2010]
GeneRIF:11771764
GeneRIF:15068243
Mongolism
GeneRIF:11920898
GeneRIF:12576745
GeneRIF:12145461
Trisomy 21 NOS[accessedResource: SNOMEDCT:254263008][accessDate: 04-11-2010]
Down syndrome
Trisomy 21 Syndrome[accessedResource: NCIt:C2993][accessDate: 04-11-2010]
Made obsolete: considered as synonym to invasive lobular carcinoma
true
obsolete_infiltrating lobular carcinoma
Ele Holloway
James Malone
AN3CA
mouse cell line
ovalbumin
Tomasz Adamusiak
liver primordium
ZFA:0000124
Tomasz Adamusiak
true
2.7.1
duplicate of EFO_0003044
obsolete_NCIH460
MCC:0000356
NCI-H460
Tomasz Adamusiak
otic placode
ZFA:0000138
Tomasz Adamusiak
vagal ganglion 3
ZFA:0001304
Tomasz Adamusiak
ILSXISS100/TejJ
http://jaxmice.jax.org/strain/009287.html
GeneRIF:15009215
GeneRIF:12755701
EMD - Emery-Dreifuss muscular dystrophy
GeneRIF:12467752
Emery Dreifuss Muscular Dystrophy 2
X-Linked Scapuloperoneal Syndrome
Scapuloperoneal Muscular Dystrophy
SNOMEDCT:129620000
SNOMEDCT:111508004
Muscular Dystrophy, Emery-Dreifuss Type[accessedResource: MSH:D020389][accessDate: 04-11-2010]
Benign scapuloperoneal muscular dystrophy with early contractures[accessedResource: SNOMEDCT:111508004][accessDate: 04-11-2010]
Scapuloperoneal muscular dystrophy (disorder)[accessedResource: SNOMEDCT:129620000][accessDate: 04-11-2010]
Muscular Dystrophy, Emery-Dreifuss, Autosomal Recessive
A heterogenous group of inherited muscular dystrophy without the involvement of nervous system. The disease is characterized by MUSCULAR ATROPHY; MUSCLE WEAKNESS; CONTRACTURE of the elbows; ACHILLES TENDON; and posterior cervical muscles; with or without cardiac features. There are several INHERITANCE PATTERNS including X-linked (X CHROMOSOME), autosomal dominant, and autosomal recessive gene mutations.
A heterogenous group of inherited muscular dystrophy without the involvement of nervous system. The disease is characterized by MUSCULAR ATROPHY; MUSCLE WEAKNESS; CONTRACTURE of the elbows; ACHILLES TENDON; and posterior cervical muscles; with or without cardiac features. There are several INHERITANCE PATTERNS including X-linked (X CHROMOSOME), autosomal dominant, and autosomal recessive gene mutations.[accessedResource: MSH:D020389][accessDate: 04-11-2010]
Emery-Dreifuss Muscular Dystrophy 2[accessedResource: MSH:D020389][accessDate: 04-11-2010]
Autosomal Dominant Emery Dreifuss Muscular Dystrophy
DOID:11726
EMD - Emery-Dreifuss muscular dystrophy[accessedResource: SNOMEDCT:111508004][accessDate: 04-11-2010]
X Linked Emery Dreifuss Muscular Dystrophy
Emery-Dreifuss muscular dystrophy
Scapuloperoneal muscular dystrophy (disorder)
Benign scapuloperoneal muscular dystrophy with early contractures
Emery-Dreifuss muscular dystrophy (disorder)
Scapuloperoneal Muscular Dystrophy[accessedResource: MSH:D020389][accessDate: 04-11-2010]
Emery-Dreifuss Syndrome
Scapuloilioperoneal Atrophy with Cardiopathy
Emery-Dreifuss muscular dystrophy (disorder)[accessedResource: DOID:11726][accessDate: 04-11-2010]
Emery-Dreifuss Type Muscular Dystrophy
Muscular Dystrophy, Emery-Dreifuss, X-Linked[accessedResource: MSH:D020389][accessDate: 04-11-2010]
Scapuloperoneal Syndrome, X Linked[accessedResource: MSH:D020389][accessDate: 04-11-2010]
Hauptmann-Thannhauser Muscular Dystrophy[accessedResource: MSH:D020389][accessDate: 04-11-2010]
GeneRIF:11973618
Muscular Dystrophy, Emery-Dreifuss, Autosomal Dominant[accessedResource: MSH:D020389][accessDate: 04-11-2010]
Autosomal Recessive Emery Dreifuss Muscular Dystrophy[accessedResource: MSH:D020389][accessDate: 04-11-2010]
MSH:D020389
Hauptmann Thannhauser Muscular Dystrophy
GeneRIF:12684533
Scapuloilioperoneal Atrophy with Cardiopathy[accessedResource: MSH:D020389][accessDate: 04-11-2010]
James Malone
Emery-Dreifuss Syndrome[accessedResource: MSH:D020389][accessDate: 04-11-2010]
Tomasz Adamusiak
interferon alpha 2a
Whipple's disease (disorder)
Whipple Disease
WHIPPLES DIS[accessedResource: MSH:D008061][accessDate: 04-11-2010]
Whipple's disease (disorder)[accessedResource: SNOMEDCT:41545003][accessDate: 04-11-2010]
SNOMEDCT:41545003
DOID:8476
Whipple's disease
MSH:D008061
WHIPPLE DIS[accessedResource: MSH:D008061][accessDate: 04-11-2010]
WD - Whipple's disease
James Malone
Intestinal Whipple's disease
A chronic systemic infection by a gram-positive bacterium, Tropheryma whippelii, mainly affecting the SMALL INTESTINE but also the JOINTS; CARDIOVASCULAR SYSTEM; and the CENTRAL NERVOUS SYSTEM. The disease is characterized by fat deposits in the INTESTINAL MUCOSA and LYMPH NODES, malabsorption, DIARRHEA with fatty stools, MALNUTRITION, and ARTHRITIS.
Whipples Disease
Intestinal Whipple's disease[accessedResource: SNOMEDCT:41545003][accessDate: 04-11-2010]
WHIPPLES DIS
WD - Whipple's disease[accessedResource: SNOMEDCT:41545003][accessDate: 04-11-2010]
A chronic systemic infection by a gram-positive bacterium, Tropheryma whippelii, mainly affecting the SMALL INTESTINE but also the JOINTS; CARDIOVASCULAR SYSTEM; and the CENTRAL NERVOUS SYSTEM. The disease is characterized by fat deposits in the INTESTINAL MUCOSA and LYMPH NODES, malabsorption, DIARRHEA with fatty stools, MALNUTRITION, and ARTHRITIS.[accessedResource: MSH:D008061][accessDate: 04-11-2010]
Intestinal lipodystrophy
ICD9:040.2
Whipple disease[accessedResource: DOID:8476][accessDate: 04-11-2010]
WHIPPLE DIS
Whipples Disease[accessedResource: MSH:D008061][accessDate: 04-11-2010]
Intestinal Lipodystrophy[accessedResource: MSH:D008061][accessDate: 04-11-2010]
C4H3FN2O2
5-fluorouracil
http://www.ebi.ac.uk/efo/EFO_0001474
5-FU
James Malone
Fluorouracil
An organofluorine compound that has formula C4H3FN2O2.
Ele Holloway
Fc1c[nH]c(=O)[nH]c1=O
5-fluoropyrimidine-2,4(1H,3H)-dione
CHEBI:46345
5-Fluoropyrimidine-2,4-dione
InChI=1/C4H3FN2O2/c5-2-1-6-4(9)7-3(2)8/h1H,(H2,6,7,8,9)/f/h6-7H
http://www.ebi.ac.uk/efo/EFO_0002488
InChIKey=GHASVSINZRGABV-ZDKSUBDRCT
James Malone
cardiac muscle cell
cardiocyte[accessedResource: CL:0000193][accessDate: 04-11-2010]
NIFSTD:sao658938043
cardiac muscle cell (sensu Arthopoda)
A myocyte located in the heart. The contractile fiber resembles those of skeletal muscle but are only one third as large in diameter, are richer in sarcoplasm, and contain centrally located instead of peripheral nuclei.[accessedResource: CL:0000746][accessDate: 04-11-2010]
BTO:0001539
CL:0000746
cardiac muscle cell (sensu Arthopoda)[accessedResource: CL:0000193][accessDate: 04-11-2010]
Tomasz Adamusiak
CL:0000193
cardiomyocyte
Striated muscle cells found in the heart. They are derived from cardiac myoblasts (myoblasts, cardiac (MSH).
Cardiac Muscle Cell[accessedResource: NIFSTD:sao658938043][accessDate: 04-11-2010]
Striated muscle cells found in the heart. They are derived from cardiac myoblasts (myoblasts, cardiac (MSH).[accessedResource: NIFSTD:sao658938043][accessDate: 04-11-2010]
A striated muscle cell found in the heart. They develop from cardiac myoblasts.[accessedResource: CL:0000193][accessDate: 04-11-2010]
A heart muscle cell.
A heart muscle cell.[accessedResource: BTO:0001539][accessDate: 04-11-2010]
heart muscle cell
A myocyte located in the heart. The contractile fiber resembles those of skeletal muscle but are only one third as large in diameter, are richer in sarcoplasm, and contain centrally located instead of peripheral nuclei.
A striated muscle cell found in the heart. They develop from cardiac myoblasts.
cardiomyocyte[accessedResource: BTO:0001539][accessDate: 04-11-2010]
cardiocyte
heart muscle cell[accessedResource: CL:0000193][accessDate: 04-11-2010]
cardiac myocyte
James Malone
Enterococcus faecalis infection
NCI Metathesaurus: C0038404
James Malone
cleavage 8-cell
ZFS:0000004
Is a mandibular muscle that consists of three subdivisions A1, A2, and A3. All three originate on the hyomandibula and suspensorium but each has a distinct insertion. A1 inserts on the maxilla, A2 inserts along the caudal margin of the articular and A3 inserts on the medial surface of the articular.[accessedResource: ZFA:0000311][accessDate: 04-11-2010]
James Malone
Is a mandibular muscle that consists of three subdivisions A1, A2, and A3. All three originate on the hyomandibula and suspensorium but each has a distinct insertion. A1 inserts on the maxilla, A2 inserts along the caudal margin of the articular and A3 inserts on the medial surface of the articular.
adductor mandibulae complex
ZFA:0000311
James Malone
true
1.8
duplicate of T-cell lymphoblastic lymphoma EFO_0000209
obsolete_T-cell lymphoblastic lymphoma
mitomycin C
20898
50-07-7
898
C15H18N4O5
[(1aS,8S,8aR,8bS)-6-amino-8a-methoxy-5-methyl-4,7-dioxo-1,1a,2,4,7,8,8a,8b-octahydroazireno[2',3':3,4]pyrrolo[1,2-a]indol-8-yl]methyl carbamate
Ele Holloway
James Malone
Tomasz Adamusiak
1,5-isoquinolinediol
CASRN:5154-02-9 Â
1,5-dihydroxyisoquinoline; 5-hydroxy-1(2H)-isoquinolinone
3T3-F442A cell[accessedResource: BTO:0001169][accessDate: 04-11-2010]
Preadipocyte cell line.
F442A
3T3-F442A cell
3T3-F442A
Ele Holloway
James Malone
BTO:0001169
Preadipocyte cell line.[accessedResource: BTO:0001169][accessDate: 04-11-2010]
Brown adipose cell[accessedResource: CL:0000449][accessDate: 04-11-2010]
A cell from the thermogenic form of adipose tissue found in newborns of many species, including humans, and in hibernating mammals. Brown fat is capable of rapid liberation of energy and seems to be important in the maintenance of body temperature immediately after birth and upon waking from hibernation.[accessedResource: CL:0000449][accessDate: 04-11-2010]
CL:0000449
James Malone
Brown adipocyte
Brown adipose cell
A cell from the thermogenic form of adipose tissue found in newborns of many species, including humans, and in hibernating mammals. Brown fat is capable of rapid liberation of energy and seems to be important in the maintenance of body temperature immediately after birth and upon waking from hibernation.
Brown adipocyte[accessedResource: CL:0000449][accessDate: 04-11-2010]
brown fat cell
James Malone
true
micromole per kilogram
umol/kg
Tomasz Adamusiak
atrial myocardium
UBERON:0002302
Tomasz Adamusiak
ILSXISS19/TejJ
http://jaxmice.jax.org/strain/009263.html
MAT:0000072
A small, pear-shaped muscular sac, located under the right lobe of the liver, in which bile secreted by the liver is stored until needed by the body for digestion.[accessedResource: BTO:0000493][accessDate: 04-11-2010]
EMAPA:17202
MFO:0003020
A small, pear-shaped muscular sac, located under the right lobe of the liver, in which bile secreted by the liver is stored until needed by the body for digestion.
gall bladder
SAEL:44
XAO:0000135
Gallbladder
TAO:0000208
James Malone
BTO:0000493
FMAID:7202
Organ with organ cavity which is continuous proximally with the cystic duct and distally terminates in the fundus of the gallbladder. Examples: There is only one gallbladder.
Gallbladder[accessedResource: FMAID:7202][accessDate: 04-11-2010]
ZFA:0000208
EV:0100090
EHDAA:8062
MA:000356
Tomasz Adamusiak
ciliary marginal zone
ZFA:0001289
Histamine antagonists are the drugs that bind to but do not activate histamine receptors, thereby blocking the actions of histamine or histamine agonists.
histamine receptor blocker
antihistamine
antihistaminics
CHEBI:37956
James Malone
antihistamines
histamine receptor blockers
antihistaminico
histamine antagonist
http://www.ebi.ac.uk/efo/EFO_0001865
James Malone
segmental plate[accessedResource: TAO:0000279][accessDate: 04-11-2010]
presomitic mesoderm
Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.[accessedResource: TAO:0000279][accessDate: 04-11-2010]
Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form.[accessedResource: ZFA:0000279][accessDate: 04-11-2010]
PSM[accessedResource: ZFA:0000279][accessDate: 04-11-2010]
Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form.
segmental plate
XAO:0000057
ZFA:0000279
Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.
PSM
TAO:0000279
pancreas
FMAID:7198
SAEL:80
A large lobulated gland of vertebrates that secretes digestive enzymes and the hormones insulin and glucagon.[accessedResource: BTO:0000988][accessDate: 04-11-2010]
EHDAA:6893
BTO:0000988
MAT:0000075
XAO:0000136
EV:0100092
MA:0002415
TAO:0000140
A large lobulated gland of vertebrates that secretes digestive enzymes and the hormones insulin and glucagon.
ZFA:0000140
MA:0001582
Lobular organ the parenchyma of which consists of glandular acini which communicate via a duct system with the duodenum. Examples: There is only one pancreas.
James Malone
EMAPA:18816
Redundant
James Malone
true
A clincal factors is a biomaterial factor that concerns the observation, treatment or measurement of disease within subjects.
obsolete_clinical factor
Tomasz Adamusiak
branchiostegal ray 1
ZFA:0001279
Jie Zheng
Tomasz Adamusiak
stomach endoderm
Ele Holloway
James Malone
4T1
unit per kilogram
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Unit_per_Kilogram
U/kg
HCC78
James Malone
CS57876 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158900&type=germplasm
CS57876
http://www.arabidopsis.org/servlets/TairObject?id=1005158900&type=germplasm
NCIt:C27351
A group of non-neoplastic and neoplastic disorders resulting from the deregulation and/or deficiency of immune system functions. It includes autoimmune disorders (e.g., lupus erythematosus, dermatomyositis, rheumatoid arthritis), congenital and acquired immunodeficiency syndromes including the acquired immune deficiency syndrome (AIDS), and neoplasms (e.g., lymphomas and malignancies secondary to transplantation.)[accessedResource: NCIt:C27351][accessDate: 04-11-2010]
Immunodeficiency with predominant T-cell defect, unspecified
Deficiency of cell-mediated immunity
Deficiency of cell-mediated immunity[accessedResource: ICD9:279.1][accessDate: 04-11-2010]
Disorders involving the immune mechanism[accessedResource: ICD9:279][accessDate: 04-11-2010]
Immunodeficiency with predominant T-cell defect, unspecified[accessedResource: ICD9:279.10][accessDate: 04-11-2010]
Other deficiency of cell-mediated immunity[accessedResource: ICD9:279.19][accessDate: 04-11-2010]
Other specified disorders of the immune mechanism[accessedResource: SNOMEDCT:191017001][accessDate: 04-11-2010]
AUTOIMMUNE DISEASE NEC[accessedResource: ICD9:279.4][accessDate: 04-11-2010]
IMMUNDEF T-CELL DEF NOS
Autoimmune disease, not elsewhere classified[accessedResource: ICD9:279.4][accessDate: 04-11-2010]
DEFIC CELL IMMUNITY NOS[accessedResource: ICD9:279.19][accessDate: 04-11-2010]
ICD9:279.8
SNOMEDCT:191019003
IMMUNE MECHANISM DIS NEC
Other specified disorders involving the immune mechanism
DOID:2914
Other specified disorders of the immune mechanism (disorder)
A group of non-neoplastic and neoplastic disorders resulting from the deregulation and/or deficiency of immune system functions. It includes autoimmune disorders (e.g., lupus erythematosus, dermatomyositis, rheumatoid arthritis), congenital and acquired immunodeficiency syndromes including the acquired immune deficiency syndrome (AIDS), and neoplasms (e.g., lymphomas and malignancies secondary to transplantation.)
[X]Disorder involving the immune mechanism, unspecified
DEFIC CELL IMMUNITY NOS
IMMUNE MECHANISM DIS NEC[accessedResource: ICD9:279.8][accessDate: 04-11-2010]
Disorder of the immune mechanism NOS
ICD9:279.4
ICD9:279.19
Other specified disorders involving the immune mechanism[accessedResource: ICD9:279.8][accessDate: 04-11-2010]
Other deficiency of cell-mediated immunity
SNOMEDCT:191035005
James Malone
ICD9:279.1
Disorder of the immune mechanism NOS (disorder)[accessedResource: SNOMEDCT:191019003][accessDate: 04-11-2010]
IMMUNDEF T-CELL DEF NOS[accessedResource: ICD9:279.10][accessDate: 04-11-2010]
Unspecified disorder of immune mechanism
Immunodeficiency and Immunosuppression Disorders[accessedResource: NCIt:C27351][accessDate: 04-11-2010]
Disorder of the immune mechanism NOS[accessedResource: SNOMEDCT:191019003][accessDate: 04-11-2010]
Other specified disorders of the immune mechanism
AUTOIMMUNE DISEASE NEC
Autoimmune disease, not elsewhere classified
IMMUNE MECHANISM DIS NOS
[X]Disorder involving the immune mechanism, unspecified[accessedResource: SNOMEDCT:191035005][accessDate: 04-11-2010]
Other specified disorders of the immune mechanism (disorder)[accessedResource: SNOMEDCT:191017001][accessDate: 04-11-2010]
Disorder of the immune mechanism NOS (disorder)
Immune System and Related Disorders[accessedResource: NCIt:C27351][accessDate: 04-11-2010]
Immunodeficiency and Immunosuppression Disorders
Unspecified disorder of immune mechanism[accessedResource: ICD9:279.9][accessDate: 04-11-2010]
IMMUNE MECHANISM DIS NOS[accessedResource: ICD9:279.9][accessDate: 04-11-2010]
Disorders involving the immune mechanism
[X]Disorder involving the immune mechanism, unspecified (disorder)[accessedResource: SNOMEDCT:191035005][accessDate: 04-11-2010]
ICD9:279
[X]Disorder involving the immune mechanism, unspecified (disorder)
immune system disease
ICD9:279.10
Immune System and Related Disorders
SNOMEDCT:191017001
ICD9:279.9
James Malone
plant component
MAT:0000003
muscular disease
Myopathy is a peripheral nervous system disease consisting of any abnormal condition or disease of the muscular tissues; commonly designates a disorder involving skeletal muscle.[accessedResource: DOID:423][accessDate: 04-11-2010]
myopathy[accessedResource: DOID:423][accessDate: 04-11-2010]
DOID:423
Myopathy is a peripheral nervous system disease consisting of any abnormal condition or disease of the muscular tissues; commonly designates a disorder involving skeletal muscle.
Tomasz Adamusiak
myopathy
Tomasz Adamusiak
A mix of specimens from multiple individuals.
MO_779
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pool
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pool[accessedResource: MO_779][accessDate: 04-11-2010]
Jie Zheng
pool
Ele Holloway
James Malone
PancTUI
PancTu-I
James Malone
period of infection
Ele Holloway
James Malone
SUDHL5
GeneRIF:15072448
A benign or malignant brain and spinal cord tumor that arises from glial cells (astrocytes, oligodendrocytes, ependymal cells). Tumors that arise from astrocytes are called astrocytic tumors or astrocytomas. Tumors that arise from oligodendrocytes are called oligodendroglial tumors. Tumors that arise from ependymal cells are called ependymomas.[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:11920587
GeneRIF:11716065
Malignant Glioma[accessedResource: MSH:D005910][accessDate: 10-05-2010]
GeneRIF:12130632
[M]Glioma NOS
GeneRIF:15334059
SNOMEDCT:189926000
GeneRIF:15469737
GeneRIF:15015772
GeneRIF:14558597
GeneRIF:15791479
Tumors of Neuroglia
GeneRIF:15361550
Neuroglial Neoplasms
GeneRIF:12963026
Glioma (except Nasal glioma, not neoplastic)[accessedResource: SNOMEDCT:74532006][accessDate: 10-05-2010]
GeneRIF:15254085
GeneRIF:15893739
[M]Glioma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189926000][accessDate: 10-05-2010]
GeneRIF:12496285
[M]Gliomas (morphologic abnormality)[accessedResource: SNOMEDCT:189908003][accessDate: 10-05-2010]
[M]Gliomas (morphologic abnormality)
GeneRIF:15973152
Replaced with central nervous system cancer (EFO_0000326)
GeneRIF:12518988
GeneRIF:15469871
A benign or malignant brain and spinal cord tumor that arises from glial cells (astrocytes, oligodendrocytes, ependymal cells). Tumors that arise from astrocytes are called astrocytic tumors or astrocytomas. Tumors that arise from oligodendrocytes are called oligodendroglial tumors. Tumors that arise from ependymal cells are called ependymomas. -- 2004
GeneRIF:12730958
[M]Gliomas
GeneRIF:12735302
GeneRIF:15737330
GeneRIF:15193433
Neoplasm of Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
[M]Glioma NOS[accessedResource: SNOMEDCT:189926000][accessDate: 10-05-2010]
Glioma, malignant (morphologic abnormality)[accessedResource: SNOMEDCT:74532006][accessDate: 10-05-2010]
GeneRIF:15867349
GeneRIF:14603470
GeneRIF:15671555
GeneRIF:15867356
Glioma NOS
GeneRIF:16092940
GeneRIF:15788675
GeneRIF:15809742
GeneRIF:15774464
Glioma NOS (morphologic abnormality)
James Malone
GeneRIF:12125964
GeneRIF:12821932
GeneRIF:15161654
GeneRIF:15094455
Glioma, malignant (morphologic abnormality)
GeneRIF:12133571
glioma NOS[accessedResource: DOID:2627][accessDate: 10-05-2010]
Neoplasm of Neuroglia
GeneRIF:15527101
GeneRIF:16264179
GeneRIF:12783249
GeneRIF:15178645
GeneRIF:12600989
GeneRIF:11716069
GeneRIF:16033774
Tumors, Glial Cell
GeneRIF:11949822
Neuroglial Tumor
GeneRIF:15882793
GeneRIF:12388552
Gliomas[accessedResource: MSH:D005910][accessDate: 10-05-2010]
Glial Cell Tumors[accessedResource: MSH:D005910][accessDate: 10-05-2010]
GeneRIF:12509854
GeneRIF:11930164
GeneRIF:14530312
Glial Neoplasm
GeneRIF:12507886
true
[M]Glioma NOS (morphologic abnormality)
GeneRIF:12883693
GeneRIF:11844831
GeneRIF:12388547
GeneRIF:15184909
Gliomas, Malignant
GeneRIF:15160992
Glioma
Glial Tumor[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
Gliomas
GeneRIF:15126357
GeneRIF:12507885
Tumor of Neuroglia
Glioma, NOS (except Nasal glioma, not neoplastic)
Neoplasm of the Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:15657358
GeneRIF:15958622
Gliomas, Malignant[accessedResource: MSH:D005910][accessDate: 10-05-2010]
Glioma (except Nasal glioma, not neoplastic)
Malignant glioma
GeneRIF:15088070
SNOMEDCT:189908003
Tumor of the Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
NCIt:C3059
GeneRIF:12778072
Glioma, malignant, no ICD-O subtype[accessedResource: SNOMEDCT:74532006][accessDate: 10-05-2010]
GeneRIF:15743799
GeneRIF:15015771
Tumor of the Neuroglia
GeneRIF:14504888
GeneRIF:12850541
Neuroglial Neoplasm
GeneRIF:15047712
GeneRIF:15684595
GeneRIF:14597411
GeneRIF:12764090
GeneRIF:16215635
GeneRIF:16304992
GeneRIF:12843258
GeneRIF:15256062
GeneRIF:11836615
GeneRIF:15557754
GeneRIF:15509526
SNOMEDCT:115240006
Glioma, malignant, no ICD-O subtype
glial tumors
Gliomas (morphologic abnormality)
GeneRIF:15580288
GeneRIF:15580296
GeneRIF:12856717
Neoplasms of Neuroglia
GeneRIF:15589840
GeneRIF:16098466
GeneRIF:12698196
Neuroglial tumor[accessedResource: DOID:2627][accessDate: 10-05-2010]
Gliomas, Mixed
GeneRIF:13130092
Glial Tumor
GeneRIF:12962281
GeneRIF:12651906
GeneRIF:15383564
GeneRIF:12061725
GeneRIF:12843260
GeneRIF:12118245
Neuroglial Neoplasms[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:15332324
Benign and malignant central nervous system neoplasms derived from glial cells (i.e., astrocytes, oligodendrocytes, and ependymocytes). Astrocytes may give rise to astrocytomas (ASTROCYTOMA) or glioblastoma multiforme (see GLIOBLASTOMA). Oligodendrocytes give rise to oligodendrogliomas (OLIGODENDROGLIOMA) and ependymocytes may undergo transformation to become EPENDYMOMA; CHOROID PLEXUS NEOPLASMS; or colloid cysts of the third ventricle. (From Escourolle et al., Manual of Basic Neuropathology, 2nd ed, p21)[accessedResource: MSH:D005910][accessDate: 10-05-2010]
GeneRIF:12684632
glioma NOS (morphologic abnormality)[accessedResource: DOID:2627][accessDate: 10-05-2010]
GeneRIF:15138575
GeneRIF:15469933
GeneRIF:15915502
GeneRIF:11809417
GeneRIF:15696967
Tumor, Glial Cell[accessedResource: MSH:D005910][accessDate: 10-05-2010]
GeneRIF:15451022
GeneRIF:14997014
GeneRIF:12231538
glioma (morphologic abnormality)
glial tumors[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:15273738
GeneRIF:12651623
GeneRIF:12629150
GeneRIF:15201989
GeneRIF:12881718
Glial Neoplasm[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:16049340
GeneRIF:12810672
GeneRIF:15056287
GeneRIF:15547763
GeneRIF:9109541
GeneRIF:15812817
Glioma, NOS (except Nasal glioma, not neoplastic)[accessedResource: SNOMEDCT:74532006][accessDate: 10-05-2010]
GeneRIF:15816541
GeneRIF:15198128
Tumor of Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:12738994
Glial Cell Tumor
SNOMEDCT:74532006
GeneRIF:15948146
GeneRIF:15592495
DOID:2627
Tumors of Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:11856869
GeneRIF:16084492
Neoplasm of the Neuroglia
GeneRIF:15123617
GeneRIF:12576462
GeneRIF:12957651
GeneRIF:12907597
GeneRIF:15870690
GeneRIF:14676120
GeneRIF:11705870
GeneRIF:12799382
GeneRIF:11948808
GeneRIF:11716067
GeneRIF:15201971
Glioma (morphologic abnormality)[accessedResource: SNOMEDCT:115240006][accessDate: 10-05-2010]
GeneRIF:11859970
Glioma, Mixed
GeneRIF:15218947
GeneRIF:16033775
GeneRIF:15696973
Glioma, Mixed[accessedResource: MSH:D005910][accessDate: 10-05-2010]
A benign or malignant brain and spinal cord tumor that arises from glial cells (astrocytes, oligodendrocytes, ependymal cells). Tumors that arise from astrocytes are called astrocytic tumors or astrocytomas. Tumors that arise from oligodendrocytes are called oligodendroglial tumors. Tumors that arise from ependymal cells are called ependymomas.
GeneRIF:15041728
GeneRIF:16389900
[M]Gliomas[accessedResource: SNOMEDCT:189908003][accessDate: 10-05-2010]
GeneRIF:15989758
GeneRIF:14719118
glioma[accessedResource: DOID:2627][accessDate: 10-05-2010]
GeneRIF:14633698
GeneRIF:14705150
GeneRIF:12545160
GeneRIF:13130506
GeneRIF:14991747
Mixed Gliomas[accessedResource: MSH:D005910][accessDate: 10-05-2010]
obsolete_glioma
GeneRIF:16027728
GeneRIF:15531913
Neoplasms of Neuroglia[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:11913980
MSH:D005910
Neuroglial Neoplasm[accessedResource: NCIt:C3059][accessDate: 10-05-2010]
GeneRIF:12198774
GeneRIF:15814461
GeneRIF:12932816
GeneRIF:12609716
GeneRIF:15269346
1.5
Gliomas (morphologic abnormality)[accessedResource: DOID:2627][accessDate: 10-05-2010]
Benign and malignant central nervous system neoplasms derived from glial cells (i.e., astrocytes, oligodendrocytes, and ependymocytes). Astrocytes may give rise to astrocytomas (ASTROCYTOMA) or glioblastoma multiforme (see GLIOBLASTOMA). Oligodendrocytes give rise to oligodendrogliomas (OLIGODENDROGLIOMA) and ependymocytes may undergo transformation to become EPENDYMOMA; CHOROID PLEXUS NEOPLASMS; or colloid cysts of the third ventricle. (From Escourolle et al., Manual of Basic Neuropathology, 2nd ed, p21)
GeneRIF:12084351
DOID:11870
frontotemporal lobar degeneration
Pick disease
NCIt:C85008
Pick's disease (disorder)
Pick's Disease[accessedResource: NCIt:C85008][accessDate: 04-11-2010]
Dementia in Pick's disease (disorder)
Pick's disease
Pick's disease (disorder)[accessedResource: DOID:11870][accessDate: 04-11-2010]
A rare neurodegenerative disorder leading to dementia. It is characterized by frontotemporal lobar degeneration with accumulation of tau proteins which form Pick bodies.
Tomasz Adamusiak
Dementia in Pick's disease (disorder)[accessedResource: DOID:11870][accessDate: 04-11-2010]
A rare neurodegenerative disorder leading to dementia. It is characterized by frontotemporal lobar degeneration with accumulation of tau proteins which form Pick bodies.[accessedResource: NCIt:C85008][accessDate: 04-11-2010]
Tomasz Adamusiak
preopercle
ZFA:0000264
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mol[accessedResource: MO_998][accessDate: 04-11-2010]
mol
mole
A substance unit which is equal to the amount of substance of a molecular system which contains as many elementary entities as there are atoms in 0.012 kilogram of carbon 12.
Jie Zheng
true
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mol
http://www.ebi.ac.uk/efo/EFO_0001690
A mole is a substance unit which is equal to the amount of substance of a molecular system which contains as many elementary entities as there are atoms in 0.012 kilogram of carbon 12.
Tomasz Adamusiak
MO_998
James Malone
GeneRIF:15289327
GeneRIF:15604885
GeneRIF:14654525
GeneRIF:12481903
acute myeloid leukaemia, disease
GeneRIF:16138343
GeneRIF:12453880
Leukemias, Acute Nonlymphocytic
Tomasz Adamusiak
GeneRIF:12393383
acute non-lymphocytic leukaemia[accessedResource: DOID:9119][accessDate: 04-11-2010]
Clonal expansion of myeloid blasts in bone marrow, blood, and other tissue. Myeloid leukemias develop from changes in cells that normally produce NEUTROPHILS; BASOPHILS; EOSINOPHILS; and MONOCYTES.[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:15674355
GeneRIF:16094422
AML - acute Myeloid Leukemia
GeneRIF:14737077
GeneRIF:15304385
GeneRIF:12130514
James Malone
GeneRIF:16012335
GeneRIF:12738986
GeneRIF:12187073
Leukemia, Myelocytic, Acute[accessedResource: MSH:D015470][accessDate: 04-11-2010]
Acute Myeloid Leukemias[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:12031914
GeneRIF:15849769
GeneRIF:11986944
AML - acute Myeloid Leukemia[accessedResource: DOID:9119][accessDate: 04-11-2010]
GeneRIF:15604894
GeneRIF:11964319
GeneRIF:14977832
GeneRIF:11714811
GeneRIF:11986950
GeneRIF:16107886
GeneRIF:15921740
GeneRIF:15607368
GeneRIF:12529664
GeneRIF:15959531
acute myeloid leukemia without mention of remission
acute non-lymphocytic leukaemia
GeneRIF:15297415
GeneRIF:15983063
MSH:D015470
GeneRIF:16115907
acute myeloblastic leukemia (disorder)[accessedResource: DOID:9119][accessDate: 04-11-2010]
GeneRIF:15659725
GeneRIF:12637330
GeneRIF:12699896
GeneRIF:12970781
GeneRIF:12351411
GeneRIF:12411058
GeneRIF:15234575
GeneRIF:15674343
GeneRIF:14738146
Acute Myeloid Leukemia without Maturation
GeneRIF:12171773
acute myeloid leukaemia, disease[accessedResource: DOID:9119][accessDate: 04-11-2010]
GeneRIF:12096348
GeneRIF:12969963
GeneRIF:12691136
GeneRIF:15203865
Leukemia, Myeloid, Acute, M2[accessedResource: MSH:D015470][accessDate: 04-11-2010]
Acute Nonlymphoblastic Leukemias[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:12408767
GeneRIF:14654075
GeneRIF:14506644
Myeloblastic Leukemia, Acute[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:12560229
GeneRIF:12696071
Acute Myelogenous Leukemias
GeneRIF:12931227
GeneRIF:11755471
GeneRIF:12557231
ANLL
GeneRIF:12554803
GeneRIF:14562119
GeneRIF:14737076
GeneRIF:14654079
GeneRIF:12970762
GeneRIF:15208643
GeneRIF:15282682
GeneRIF:15039279
GeneRIF:15309527
GeneRIF:12091906
GeneRIF:15725483
Myelogenous Leukemias, Acute[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:15849776
GeneRIF:12618766
Acute Myeloid Leukemia with Maturation[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:15575056
GeneRIF:12369998
GeneRIF:14966562
GeneRIF:12209593
GeneRIF:15313458
GeneRIF:15717688
GeneRIF:12543865
GeneRIF:11830489
GeneRIF:15569991
Acute Myeloid Leukemia with Maturation
GeneRIF:15840695
GeneRIF:11986947
GeneRIF:15988004
GeneRIF:15054042
GeneRIF:15621793
GeneRIF:12676584
GeneRIF:11921279
GeneRIF:15388581
ANLL[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:12127405
GeneRIF:11823047
GeneRIF:12660026
GeneRIF:12665971
GeneRIF:12417632
GeneRIF:12145683
GeneRIF:12145704
GeneRIF:15985538
GeneRIF:15489901
Clonal expansion of myeloid blasts in bone marrow, blood, and other tissue. Myeloid leukemias develop from changes in cells that normally produce NEUTROPHILS; BASOPHILS; EOSINOPHILS; and MONOCYTES.
GeneRIF:14630076
GeneRIF:12717436
GeneRIF:15978940
Leukemia, Myeloid, Acute, M2
Myeloblastic Leukemia, Acute
GeneRIF:12152989
Nonlymphocytic Leukemia, Acute[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:15855281
Acute Nonlymphocytic Leukemias[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:11782354
GeneRIF:11809673
Acute Myeloid Leukemias
GeneRIF:14662338
GeneRIF:12926083
AML
GeneRIF:12393438
GeneRIF:12461747
GeneRIF:12186696
GeneRIF:11911810
GeneRIF:15061191
GeneRIF:14615365
DOID:9119
GeneRIF:12935959
acute myeloblastic leukemia (disorder)
GeneRIF:15718420
ANLL in Remission
ANLL in Remission[accessedResource: DOID:9119][accessDate: 04-11-2010]
Leukemia, Myeloid, Acute, M1
GeneRIF:16105979
GeneRIF:11999574
GeneRIF:12060632
AML[accessedResource: DOID:9119][accessDate: 04-11-2010]
GeneRIF:14726504
GeneRIF:12433286
acute myeloid leukaemia - category
GeneRIF:15203866
GeneRIF:12239146
GeneRIF:12854887
acute myeloid leukemia in remission
GeneRIF:12008078
GeneRIF:12393450
acute myeloid leukemia in remission[accessedResource: DOID:9119][accessDate: 04-11-2010]
acute myeloid leukemia in remission (disorder)
GeneRIF:12070009
GeneRIF:11847008
acute myeloid leukemia in remission (disorder)[accessedResource: DOID:9119][accessDate: 04-11-2010]
GeneRIF:15607361
GeneRIF:15128421
GeneRIF:12799277
GeneRIF:15385933
GeneRIF:15772702
GeneRIF:12208746
GeneRIF:12496475
GeneRIF:15735013
GeneRIF:11920209
GeneRIF:12427969
GeneRIF:12661007
Leukemias, Acute Myelocytic
Myeloid Leukemia, Acute, M1[accessedResource: MSH:D015470][accessDate: 04-11-2010]
Acute Myeloid Leukemia without Maturation[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:12855590
GeneRIF:14966519
GeneRIF:15451031
GeneRIF:12239147
Nonlymphoblastic Leukemias, Acute
GeneRIF:12760263
Nonlymphocytic Leukemia, Acute
GeneRIF:15735743
GeneRIF:15618958
Acute Myelogenous Leukemia[accessedResource: MSH:D015470][accessDate: 04-11-2010]
acute myeloid leukaemia - category[accessedResource: DOID:9119][accessDate: 04-11-2010]
GeneRIF:12389613
GeneRIF:14959847
GeneRIF:12604403
GeneRIF:15902282
Leukemia, Nonlymphoblastic, Acute
GeneRIF:12921955
Leukemias, Acute Myeloblastic[accessedResource: MSH:D015470][accessDate: 04-11-2010]
acute myeloid leukaemia[accessedResource: DOID:9119][accessDate: 04-11-2010]
acute myeloid leukemia
acute myeloid leukemia without mention of remission[accessedResource: DOID:9119][accessDate: 04-11-2010]
GeneRIF:14689061
GeneRIF:12163055
GeneRIF:12112533
GeneRIF:15831697
GeneRIF:15146183
GeneRIF:14749703
GeneRIF:12393285
GeneRIF:16136505
GeneRIF:14674243
GeneRIF:12351377
GeneRIF:11986951
GeneRIF:12161354
GeneRIF:15749074
GeneRIF:12008077
GeneRIF:15103390
GeneRIF:15085153
GeneRIF:14576828
GeneRIF:15325104
GeneRIF:14762685
GeneRIF:14580777
GeneRIF:12031912
GeneRIF:14615378
GeneRIF:12393447
GeneRIF:14623259
Acute Myeloblastic Leukemias
Acute Myelocytic Leukemias[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:12200377
Leukemia, Myelogenous, Acute
ICD9:205.0
GeneRIF:14628086
GeneRIF:12036858
Leukemia, Acute Nonlymphoblastic[accessedResource: MSH:D015470][accessDate: 04-11-2010]
GeneRIF:16239914
Acute Myelocytic Leukemia
GeneRIF:12082641
GeneRIF:15334552
GeneRIF:12171774
acute myeloid leukaemia
GeneRIF:15522959
Tomasz Adamusiak
ILSXISS115/TejJ
http://jaxmice.jax.org/strain/009293.html
Tomasz Adamusiak
British
UMLS:C0596227
HeLa-S3
larval stage
James Malone
MAT:0000400
tadpole stage
WBIs:0000023
tadpole stage[accessedResource: MAT:0000400][accessDate: 04-11-2010]
FBdv:00005336
XAO:1000008
phenol red
143-74-8
22408
2408
4,4'-(1,1-dioxido-3H-2,1-benzoxathiole-3,3-diyl)diphenol
C19H14O5S
Caki1
Caki-1
Ele Holloway
James Malone
2-nitrofluorene
2-nitro-9H-fluorene
20971
607-57-8
971
C13H9NO2
methyl mercuric(II) chloride
115-09-3
20813
813
CH3ClHg
chloro(methyl)mercury
MeHg
James Malone
MALT lymphoma
http://purl.org/obo/owl/CHEBI#CHEBI_51086
James Malone
http://www.ebi.ac.uk/efo/EFO_0001815
The role of a chemical to be an anti-inflammatory drug.
A role played by the molecular entity or part thereof within a chemical context.
chemical role
GeneRIF:12112555
Esophagus Adenocarcinoma
GeneRIF:15517897
GeneRIF:15526353
adenocarcinoma of esophagus[accessedResource: DOID:4914][accessDate: 04-11-2010]
Oesophageal adenocarcinoma NOS[accessedResource: DOID:4914][accessDate: 04-11-2010]
adenocarcinoma of esophagus (disorder)
Oesophageal adenocarcinoma NOS
A malignant tumor with glandular differentiation arising predominantly from Barrett mucosa in the lower third of the esophagus. Rare examples of esophageal adenocarcinoma deriving from ectopic gastric mucosa in the upper esophagus have also been reported. Grossly, esophageal adenocarcinomas are similar to esophageal squamous cell carcinomas. Microscopically, adenocarcinomas arising in the setting of Barrett esophagus are typically papillary and/or tubular. The prognosis is poor.
Adenocarcinoma of oesophagus
Adenocarcinoma of the Esophagus[accessedResource: NCIt:C4025][accessDate: 04-11-2010]
James Malone
GeneRIF:15720819
DOID:4914
Adenocarcinoma of oesophagus[accessedResource: SNOMEDCT:276803003][accessDate: 04-11-2010]
GeneRIF:12771886
GeneRIF:15688381
Adenocarcinoma of the Esophagus
Adenocarcinoma of Esophagus
Esophagus Adenocarcinoma[accessedResource: NCIt:C4025][accessDate: 04-11-2010]
Adenocarcinoma of esophagus (disorder)[accessedResource: SNOMEDCT:276803003][accessDate: 04-11-2010]
NCIt:C4025
A malignant tumor with glandular differentiation arising predominantly from Barrett mucosa in the lower third of the esophagus. Rare examples of esophageal adenocarcinoma deriving from ectopic gastric mucosa in the upper esophagus have also been reported. Grossly, esophageal adenocarcinomas are similar to esophageal squamous cell carcinomas. Microscopically, adenocarcinomas arising in the setting of Barrett esophagus are typically papillary and/or tubular. The prognosis is poor.[accessedResource: NCIt:C4025][accessDate: 04-11-2010]
esophageal adenocarcinoma
GeneRIF:16040301
GeneRIF:15680394
SNOMEDCT:276803003
Tomasz Adamusiak
epibranchial 5
ZFA:0001244
James Malone
GM12813
pharyngeal arches
One of a series of bony or cartilaginous arches that develop in the walls of the mouth cavity and pharynx of a vertebrate embryo, consist typically of a curved segmented bar or rod on each side meeting the contralateral bar or rod at the ventral end, and correspond to the gill arches of fishes and amphibians.
pharyngeal arches[accessedResource: ZFA:0001306][accessDate: 04-11-2010]
MAT:0000242
ZFA:0001306
James Malone
pharyngeal arch
BTO:0001785
branchial arch[accessedResource: BTO:0001785][accessDate: 04-11-2010]
visceral arch[accessedResource: BTO:0001785][accessDate: 04-11-2010]
One of a series of bony or cartilaginous arches that develop in the walls of the mouth cavity and pharynx of a vertebrate embryo, consist typically of a curved segmented bar or rod on each side meeting the contralateral bar or rod at the ventral end, and correspond to the gill arches of fishes and amphibians.[accessedResource: BTO:0001785][accessDate: 04-11-2010]
branchial arch
visceral arch
James Malone
CS57836 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158860&type=germplasm
CS57836
http://www.arabidopsis.org/servlets/TairObject?id=1005158860&type=germplasm
HCC1954
James Malone
Tomasz Adamusiak
apical ectodermal ridge dorsal fin
ZFA:0000090
Neurofibroma, NOS
SNOMEDCT:115242003
Tomasz Adamusiak
James Malone
GeneRIF:14679180
Neurofibroma (morphologic abnormality)[accessedResource: SNOMEDCT:89084002][accessDate: 04-11-2010]
NIFSTD:birnlex_12604
Neurofibroma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:89084002][accessDate: 04-11-2010]
[M]Neurofibromas[accessedResource: SNOMEDCT:115242003][accessDate: 04-11-2010]
[M]Neurofibroma NOS[accessedResource: SNOMEDCT:189947001][accessDate: 04-11-2010]
GeneRIF:15652750
Neurofibroma NOS (morphologic abnormality)[accessedResource: DOID:962][accessDate: 04-11-2010]
Neurofibroma, no ICD-O subtype
[M]Neurofibroma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189947001][accessDate: 04-11-2010]
Neurofibroma (disorder)[accessedResource: DOID:962][accessDate: 04-11-2010]
Neurofibromas
Nerve sheath tumour[accessedResource: SNOMEDCT:115242003][accessDate: 04-11-2010]
Nerve sheath tumor
Neurofibroma, NOS[accessedResource: SNOMEDCT:89084002][accessDate: 04-11-2010]
An intraneural or extraneural neoplasm arising from nerve tissues and neural sheaths. It is composed of perineurial-like fibroblasts and Schwann cells. It usually presents as a localized cutaneous lesion and less often as a circumscribed peripheral nerve mass. Patients with neurofibromatosis type 1 present with multiple masses. Neurofibromas which arise from major nerves and plexiform neurofibromas are precursor lesions to malignant peripheral nerve sheath tumors.[accessedResource: NCIt:C3272][accessDate: 04-11-2010]
SNOMEDCT:404029005
An intraneural or extraneural neoplasm arising from nerve tissues and neural sheaths. It is composed of perineurial-like fibroblasts and Schwann cells. It usually presents as a localized cutaneous lesion and less often as a circumscribed peripheral nerve mass. Patients with neurofibromatosis type 1 present with multiple masses. Neurofibromas which arise from major nerves and plexiform neurofibromas are precursor lesions to malignant peripheral nerve sheath tumors.
[M]Neurofibromas
Neurofibroma (disorder)
DOID:962
Nerve sheath tumor[accessedResource: SNOMEDCT:115242003][accessDate: 04-11-2010]
Neurofibroma NOS (morphologic abnormality)
Nerve sheath tumor (morphologic abnormality)[accessedResource: SNOMEDCT:115242003][accessDate: 04-11-2010]
Neurofibromas[accessedResource: MSH:D009455][accessDate: 04-11-2010]
Nerve sheath tumor (morphologic abnormality)
SNOMEDCT:189947001
SNOMEDCT:89084002
NCIt:C3272
A moderately firm, benign, encapsulated tumor resulting from proliferation of SCHWANN CELLS and FIBROBLASTS that includes portions of nerve fibers. The tumors usually develop along peripheral or cranial nerves and are a central feature of NEUROFIBROMATOSIS 1, where they may occur intracranially or involve spinal roots. Pathologic features include fusiform enlargement of the involved nerve. Microscopic examination reveals a disorganized and loose cellular pattern with elongated nuclei intermixed with fibrous strands (MeSH).[accessedResource: NIFSTD:birnlex_12604][accessDate: 04-11-2010]
Neurofibroma, no ICD-O subtype (morphologic abnormality)
neurofibroma
Nerve sheath tumour
[M]Neurofibroma NOS (morphologic abnormality)
A moderately firm, benign, encapsulated tumor resulting from proliferation of SCHWANN CELLS and FIBROBLASTS that includes portions of nerve fibers. The tumors usually develop along peripheral or cranial nerves and are a central feature of NEUROFIBROMATOSIS 1, where they may occur intracranially or involve spinal roots. Pathologic features include fusiform enlargement of the involved nerve. Microscopic examination reveals a disorganized and loose cellular pattern with elongated nuclei intermixed with fibrous strands. (From Adams et al., Principles of Neurology, 6th ed, p1016)[accessedResource: MSH:D009455][accessDate: 04-11-2010]
A moderately firm, benign, encapsulated tumor resulting from proliferation of SCHWANN CELLS and FIBROBLASTS that includes portions of nerve fibers. The tumors usually develop along peripheral or cranial nerves and are a central feature of NEUROFIBROMATOSIS 1, where they may occur intracranially or involve spinal roots. Pathologic features include fusiform enlargement of the involved nerve. Microscopic examination reveals a disorganized and loose cellular pattern with elongated nuclei intermixed with fibrous strands (MeSH).
MSH:D009455
Neurofibroma (morphologic abnormality)
A moderately firm, benign, encapsulated tumor resulting from proliferation of SCHWANN CELLS and FIBROBLASTS that includes portions of nerve fibers. The tumors usually develop along peripheral or cranial nerves and are a central feature of NEUROFIBROMATOSIS 1, where they may occur intracranially or involve spinal roots. Pathologic features include fusiform enlargement of the involved nerve. Microscopic examination reveals a disorganized and loose cellular pattern with elongated nuclei intermixed with fibrous strands. (From Adams et al., Principles of Neurology, 6th ed, p1016)
Neurofibroma, no ICD-O subtype[accessedResource: SNOMEDCT:89084002][accessDate: 04-11-2010]
[M]Neurofibroma NOS
floral transition
Ele Holloway
James Malone
ES2
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#biosequence_provider[accessedResource: MO_881][accessDate: 04-11-2010]
Tomasz Adamusiak
biosequence provider
MO_881
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#biosequence_provider
EV:0100057
valve[accessedResource: TGMA:0000131][accessDate: 04-11-2010]
buccal cavity
Oral part of face
mouth structure
adult mouth
Oral part of face[accessedResource: FMAID:49184][accessDate: 04-11-2010]
buccal cavity[accessedResource: MAT:0000038][accessDate: 04-11-2010]
valve
XAO:0000126
WBbt:0005255
TAO:0000547
anatomische Mund[accessedResource: TGMA:0000131][accessDate: 04-11-2010]
EMAPA:16262
mouth[accessedResource: TAO:0000547][accessDate: 04-11-2010]
MAT:0000038
AAO:0000053
TGMA:0000131
XAO:0003029
MA:0000341
James Malone
BTO:0001090
FBbt:00003126
The anterior opening of the stomodeum located between the cibarium and pharynx; not to be confused with the secondary mouth (anterior opening of the cibarium) or the tertiary mouth (anterior opening of the food meatus).
The natural opening through which food passes into the body of an animal and which in vertebrates is typically bounded externally by the lips and internally by the pharynx and encloses the tongue, gums, and teeth.[accessedResource: BTO:0001090][accessDate: 04-11-2010]
The natural opening through which food passes into the body of an animal and which in vertebrates is typically bounded externally by the lips and internally by the pharynx and encloses the tongue, gums, and teeth.
TADS:0000040
anatomische Mund
FMAID:49184
Mouth
adult mouth[accessedResource: FBbt:00003126][accessDate: 04-11-2010]
oral cavity
The anterior opening of the stomodeum located between the cibarium and pharynx; not to be confused with the secondary mouth (anterior opening of the cibarium) or the tertiary mouth (anterior opening of the food meatus).[accessedResource: TGMA:0000131][accessDate: 04-11-2010]
Oral region[accessedResource: FMAID:49184][accessDate: 04-11-2010]
Rima oris[accessedResource: TGMA:0000131][accessDate: 04-11-2010]
oral cavity[accessedResource: MAT:0000038][accessDate: 04-11-2010]
pharyngeal valve
pharyngeal valve[accessedResource: TGMA:0000131][accessDate: 04-11-2010]
Rima oris
Oral region
ZFA:0000547
mature T cell
T-lymphocyte[accessedResource: CL:0000084][accessDate: 04-11-2010]
A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.
immature T cell[accessedResource: CL:0000084][accessDate: 04-11-2010]
mature T cell[accessedResource: CL:0000084][accessDate: 04-11-2010]
T-lymphocyte
T cell
Th1
James Malone
CL:0000084
Th2
immature T cell
pancreatic T effector cell
A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.[accessedResource: CL:0000084][accessDate: 04-11-2010]
Tomasz Adamusiak
floor plate rhombomere 6
ZFA:0000889
Tomasz Adamusiak
hippocampus CA3
MA:0000952
birn_anat:birnlex_1204
Ele Holloway
James Malone
Tomasz Adamusiak
Aroclor 1254
CASRN:11097-69-1
Ele Holloway
James Malone
YCC3
Tomasz Adamusiak
posterior caudal vein
ZFA:0001063
Barrett's esophagus
Barrett's Syndrome
Barrett's oesophagus[accessedResource: DOID:9206][accessDate: 04-11-2010]
Barretts Syndrome[accessedResource: MSH:D001471][accessDate: 04-11-2010]
(ulcerative esophagitis) or (Barrett's esophagus)[accessedResource: DOID:9206][accessDate: 04-11-2010]
GeneRIF:15967118
GeneRIF:15041721
DOID:9206
Barrett's ulcer of esophagus (disorder)
GeneRIF:15167938
(ulcerative esophagitis) or (Barrett's esophagus)
Barrett's esophagus (disorder) [Ambiguous][accessedResource: DOID:9206][accessDate: 04-11-2010]
Barrett's esophagus (disorder)[accessedResource: DOID:9206][accessDate: 04-11-2010]
CLE[accessedResource: DOID:9206][accessDate: 04-11-2010]
A condition with damage to the lining of the lower ESOPHAGUS resulting from chronic acid reflux (ESOPHAGITIS, REFLUX). Through the process of metaplasia, the squamous cells are replaced by a columnar epithelium with cells resembling those of the INTESTINE or the salmon-pink mucosa of the STOMACH. Barrett's columnar epithelium is a marker for severe reflux and precursor to ADENOCARCINOMA of the esophagus.[accessedResource: MSH:D001471][accessDate: 04-11-2010]
GeneRIF:15231484
Barrett's esophagus (disorder) [Ambiguous]
Barretts Esophagus[accessedResource: MSH:D001471][accessDate: 04-11-2010]
James Malone
Barrett Epithelium[accessedResource: MSH:D001471][accessDate: 04-11-2010]
GeneRIF:11857318
GeneRIF:15013707
Barrett's esophagus with esophagitis (disorder)
GeneRIF:16291394
GeneRIF:15878911
Syndrome, Barrett
Barrett's ulcer of esophagus (disorder)[accessedResource: DOID:9206][accessDate: 04-11-2010]
Barrett Syndrome[accessedResource: MSH:D001471][accessDate: 04-11-2010]
GeneRIF:15810620
Barrett's esophagus with esophagitis (disorder)[accessedResource: DOID:9206][accessDate: 04-11-2010]
ICD9:530.85
Barrett's esophagus (disorder)
Esophagus, Barrett[accessedResource: MSH:D001471][accessDate: 04-11-2010]
GeneRIF:14576477
Barrett Esophagus
Barrett's oesophagus
Barrett Epithelium
CLE
A condition with damage to the lining of the lower ESOPHAGUS resulting from chronic acid reflux (ESOPHAGITIS, REFLUX). Through the process of metaplasia, the squamous cells are replaced by a columnar epithelium with cells resembling those of the INTESTINE or the salmon-pink mucosa of the STOMACH. Barrett's columnar epithelium is a marker for severe reflux and precursor to ADENOCARCINOMA of the esophagus.
MSH:D001471
GeneRIF:15716603
Barretts Esophagus
GeneRIF:15824739
N-Ethyl-N-nitroso-urea
C3H7N3O2
Aethylnitroso-harnstoff
InChI=1/C3H7N3O2/c1-2-6(5-8)3(4)7/h2H2,1H3,(H2,4,7)/f/h4H2
http://www.ebi.ac.uk/efo/EFO_0001533
CCN(N=O)C(N)=O
CHEBI:23995
1-(Aminocarbonyl)-1-ethyl-2-oxohydrazine
A urea compound having ethyl and nitroso substituents in the 1-position.
N-Ethyl-N-nitroso carbamide
ENU
N-Ethylnitrosourea
NEU
1-ethyl-1-nitrosourea
ethyl nitrosourea
InChIKey=FUSGACRLAFQQRL-LGEMBHMGCE
James Malone
cyano(4-fluoro-3-phenoxyphenyl)methyl 3-(2,2-dichloroethenyl)-2,2-dimethylcyclopropanecarboxylate
(R,S)-alpha-Cyano-4-fluoro-3-phenoxybenzyl-(1R,S)-cis,trans-3-(2,2-dichlorovinyl)-2,2-dimethylcyclopropanecarboxylate
InChIKey=QQODLKZGRKWIFG-UHFFFAOYAM
C22H18Cl2FNO3
http://www.ebi.ac.uk/efo/EFO_0001515
CC1(C)C(C=C(Cl)Cl)C1C(=O)OC(C#N)c1ccc(F)c(Oc2ccccc2)c1
CHEBI:4034
InChI=1/C22H18Cl2FNO3/c1-22(2)15(11-19(23)24)20(22)21(27)29-18(12-26)13-8-9-16(25)17(10-13)28-14-6-4-3-5-7-14/h3-11,15,18,20H,1-2H3
cyfluthrin
James Malone
BJAB cell[accessedResource: BTO:0001931][accessDate: 04-11-2010]
Ele Holloway
The malignant human B-cell-line BJAB is a EBV-negative Burkitt-like lymphoma cell line.[accessedResource: BTO:0001931][accessDate: 04-11-2010]
BJAB cell
BJAB
The malignant human B-cell-line BJAB is a EBV-negative Burkitt-like lymphoma cell line.
BTO:0001931
Tomasz Adamusiak
embryonic proventriculus intermediate layer
FBbt:00005609
James Malone
HMEC
The brain and spinal cord.
MA:0000167
BTO:0000227
CNS[accessedResource: FMAID:55675][accessDate: 04-11-2010]
Cerebrospinal axis[accessedResource: FMAID:55675][accessDate: 04-11-2010]
The central nervous system is that part of the nervous system that consists of the brain and spinal cord. The central nervous system (CNS) is one of the two major divisions of the nervous system. The other is the peripheral nervous system (PNS) which is outside the brain and spinal cord.
Tomasz Adamusiak
NIFSTD:birnlex_1099
James Malone
FMAID:55675
MAT:0000457
ZFA:0000012
The brain and spinal cord.[accessedResource: ZFA:0000012][accessDate: 04-11-2010]
Organ with organ cavity which consists of gray matter and white matter. Examples: There is only one neuraxis.
EMAPA:16470
Cerebrospinal axis
The central nervous system is that part of the nervous system that consists of the brain and spinal cord. The central nervous system (CNS) is one of the two major divisions of the nervous system. The other is the peripheral nervous system (PNS) which is outside the brain and spinal cord.[accessedResource: BTO:0000227][accessDate: 04-11-2010]
EV:0100163
central nervous system
TAO:0000012
CNS
The brain and spinal cord. Kimmel et al, 1995.[accessedResource: TAO:0000012][accessDate: 04-11-2010]
The brain and spinal cord. Kimmel et al, 1995.
Neuraxis
Neuraxis[accessedResource: FMAID:55675][accessDate: 04-11-2010]
EHDAA:828
Tomasz Adamusiak
primary segmental branch primordium
FBbt:00017011
gene name
The often showy flower component attached just inside the sepals; petals are usually colorful to attract pollinators.[accessedResource: BTO:0001040][accessDate: 04-11-2010]
BTO:0001040
GRO:0005667
petal
The often showy flower component attached just inside the sepals; petals are usually colorful to attract pollinators.
GRO:0005667[accessedResource: BTO:0001040][accessDate: 04-11-2010]
James Malone
PO:0009032
MAT:0000354
STRUCTURE_Formula:(6aR)-6-methyl-5,6,6a,7-tetrahydro-4H-dibenzo[de,g]quinoline-10,11-diol hydrochloride
DSSTox_CID:40598
James Malone
CASRN:314-19-2
Tomasz Adamusiak
DSSTox_Generic_SID:C17H18ClNO2
R-(-)-apomorphine hydrochloride
Ele Holloway
MO_905
http://www.ebi.ac.uk/efo/EFO_0001718
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pl
picoliter
Tomasz Adamusiak
A picoliter is a volume unit which is equal to 10^-12 L.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pl[accessedResource: MO_905][accessDate: 04-11-2010]
James Malone
Jie Zheng
A volume unit which is equal to 10^[-12] L.
true
pl
Tomasz Adamusiak
Publication published in a journal.
published
InChI=1/C15H16O2/c1-15(2,11-3-7-13(16)8-4-11)12-5-9-14(17)10-6-12/h3-10,16-17H,1-2H3
C15H16O2
CHEBI:33216
2,2-Bis(p-hydroxyphenyl)propane
A bisphenol that has formula C15H16O2.
2,2-Di(4-hydroxyphenyl)propane
4,4'-Isopropylidenediphenol
InChIKey=IISBACLAFKSPIT-UHFFFAOYAI
4,4'-(1-Methylethylidene)bisphenol
CC(C)(c1ccc(O)cc1)c1ccc(O)cc1
http://www.ebi.ac.uk/efo/EFO_0001493
bisphenol A
2,2-Bis(4-Hydroxyphenyl)propane
4,4'-(propane-2,2-diyl)diphenol
2,2-Di(4-phenylol)propane
4,4'-Bisphenol A
is equivalent to an instance of class organism
true
Identifier or name of the individual organism from which the biomaterial was derived.
obsolete_individual
silique
fruit
James Malone
BTO:0000486
The mature ovary or ovaries of a seed-bearing plant, together with accessory parts, containing the seeds and occurring in a wide variety of forms.
GRO:0005250
GRO:0005250[accessedResource: BTO:0000486][accessDate: 04-11-2010]
MAT:0000232
The mature ovary or ovaries of a seed-bearing plant, together with accessory parts, containing the seeds and occurring in a wide variety of forms.[accessedResource: BTO:0000486][accessDate: 04-11-2010]
PO:0009001
MAT:0000133
bronchus
XAO:0000121
EMAPA:16849
Bronchial trunk
Bronchial trunk[accessedResource: FMAID:7409][accessDate: 04-11-2010]
main bronchus
MA:0000436
EHDAA:3072
main bronchus[accessedResource: MAT:0000133][accessDate: 04-11-2010]
BTO:0001340
EV:0100041
FMAID:7409
SAEL:14
James Malone
Either of the two primary divisions of the trachea that lead respectively into the right and the left lung.
Either of the two primary divisions of the trachea that lead respectively into the right and the left lung.[accessedResource: BTO:0001340][accessDate: 04-11-2010]
Arch of aorta[accessedResource: FMAID:3768][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
aortic arch
FMAID:3768
Arch of aorta
epithelium posterius corneae
James Malone
epithelium posterius corneae[accessedResource: BTO:0000287][accessDate: 04-11-2010]
corneal epithelium
anterior endothelium of cornea
Stratified squamous epithelium that covers the outer surface of the cornea. (MeSH)
anterior endothelium of cornea[accessedResource: BTO:0000287][accessDate: 04-11-2010]
Posterior epithelium of cornea: the mesothelial layer covering the posterior surface of the posterior limiting lamina of the cornea; it was once believed to extend to the anterior surface of the stroma of the iris.
endothelium corneale[accessedResource: BTO:0000287][accessDate: 04-11-2010]
corneal endothelium[accessedResource: BTO:0000287][accessDate: 04-11-2010]
Posterior epithelium of cornea: the mesothelial layer covering the posterior surface of the posterior limiting lamina of the cornea; it was once believed to extend to the anterior surface of the stroma of the iris.[accessedResource: BTO:0000287][accessDate: 04-11-2010]
Stratified squamous epithelium that covers the outer surface of the cornea. (MeSH)[accessedResource: NCIt:C12928][accessDate: 04-11-2010]
endothelium anterius corneae
endothelium corneale
endothelium camerae anterioris bulbi[accessedResource: BTO:0000287][accessDate: 04-11-2010]
BTO:0000287
NCIt:C12928
endothelium camerae anterioris bulbi
endothelium anterius corneae[accessedResource: BTO:0000287][accessDate: 04-11-2010]
corneal endothelium
Tomasz Adamusiak
labial sensory complex primordium
FBbt:00005545
CL:0000232
RBC
Any of the hemoglobin-containing cells that carry oxygen to the tissues and are responsible for the red color of vertebrate blood.[accessedResource: BTO:0000424][accessDate: 04-11-2010]
red blood cell[accessedResource: CL:0000232][accessDate: 04-11-2010]
BTO:0000424
A red blood cell. In mammals, mature erythrocytes are non-nucleated, biconcave disks containing hemoglobin whose function is to transport oxygen.
red blood cell
RBC[accessedResource: CL:0000232][accessDate: 04-11-2010]
A red blood cell. In mammals, mature erythrocytes are biconcave disks containing hemoglobin whose function is to transport oxygen.[accessedResource: CL:0000232][accessDate: 04-11-2010]
red blood corpuscle[accessedResource: BTO:0000424][accessDate: 04-11-2010]
Any of the hemoglobin-containing cells that carry oxygen to the tissues and are responsible for the red color of vertebrate blood.
erythrocyte
A red blood cell. In mammals, mature erythrocytes are biconcave disks containing hemoglobin whose function is to transport oxygen.
James Malone
red blood corpuscle
http://www.ebi.ac.uk/efo/EFO_0002492
A naphthalenediamine compound having amino substituents in the 1- and 5-positions.
naphthalene-1,5-diamine
1,5-Naphthylenediamine
1,5-Diaminonaphthalene
CHEBI:53003
Nc1cccc2c(N)cccc12
C10H10N2
Ele Holloway
1,5-Naphthalenediamine
James Malone
InChI=1/C10H10N2/c11-9-5-1-3-7-8(9)4-2-6-10(7)12/h1-6H,11-12H2
InChIKey=KQSABULTKYLFEV-UHFFFAOYAR
Jie Zheng
Tomasz Adamusiak
C57Bl/10 derived non-diabetic mouse strain expressing H2g7 and Idd3
B10.NOD_H2g7_Idd3
https://www.cbil.upenn.edu/RADQuerier/php/sampleInfo.php?assay_id=8647&&study_id=2424
James Malone
Tomasz Adamusiak
benign neoplasm
benign tumor
GeneRIF:16255765
GeneRIF:16015705
GeneRIF:15094940
SNOMEDCT:19943007
liver cirrhosis
Cirrhoses, Hepatic
DOID:5082
Cirrhoses, Liver
Cirrhosis of liver without mention of alcohol[accessedResource: SNOMEDCT:19943007][accessDate: 04-11-2010]
GeneRIF:15550559
GeneRIF:12532467
GeneRIF:12971960
Cirrhoses, Liver[accessedResource: MSH:D008103][accessDate: 04-11-2010]
GeneRIF:15172884
Cirrhosis of liver (disorder)
GeneRIF:15368451
MSH:D008103
GeneRIF:12127815
GeneRIF:12757931
GeneRIF:14768003
GeneRIF:15239259
liver cirrhosis[accessedResource: DOID:5082][accessDate: 04-11-2010]
GeneRIF:15094224
GeneRIF:15982324
Cirrhosis of liver without mention of alcohol
Cirrhosis[accessedResource: NCIt:C2951][accessDate: 04-11-2010]
GeneRIF:12829997
A disorder characterized by replacement of the liver parenchyma with fibrous tissue and regenerative nodules. It is usually caused by alcoholisms, hepatitis B, and hepatitis C. Complications include the development of ascites, esophageal varices, bleeding, and hepatic encephalopathy.
Cirrhosis of liver, NOS
NCIt:C2951
GeneRIF:11953887
cirrhosis
GeneRIF:15956070
Fibroses, Liver
GeneRIF:14669345
Hepatic cirrhosis, NOS[accessedResource: SNOMEDCT:19943007][accessDate: 04-11-2010]
GeneRIF:12842454
Hepatic cirrhosis
GeneRIF:15808312
SNOMEDCT:235891006
cirrhosis of liver
GeneRIF:15737463
GeneRIF:15710227
Cirrhosis of liver (disorder)[accessedResource: SNOMEDCT:19943007][accessDate: 04-11-2010]
GeneRIF:16098781
GeneRIF:15104370
GeneRIF:15765409
GeneRIF:15222038
James Malone
GeneRIF:12829439
Cirrhosis of liver NOS (disorder)[accessedResource: SNOMEDCT:235891006][accessDate: 04-11-2010]
Hepatic cirrhosis, NOS
Hepatic Cirrhoses[accessedResource: MSH:D008103][accessDate: 04-11-2010]
Liver disease in which the normal microcirculation, the gross vascular anatomy, and the hepatic architecture have been variably destroyed and altered with fibrous septa surrounding regenerated or regenerating parenchymal nodules.[accessedResource: MSH:D008103][accessDate: 04-11-2010]
Cirrhosis of liver NOS (disorder)
CL - Cirrhosis of liver
Fibroses, Liver[accessedResource: MSH:D008103][accessDate: 04-11-2010]
GeneRIF:15956705
A disorder characterized by replacement of the liver parenchyma with fibrous tissue and regenerative nodules. It is usually caused by alcoholisms, hepatitis B, and hepatitis C. Complications include the development of ascites, esophageal varices, bleeding, and hepatic encephalopathy.[accessedResource: NCIt:C2951][accessDate: 04-11-2010]
GeneRIF:12945872
Cirrhosis of liver NOS[accessedResource: DOID:5082][accessDate: 04-11-2010]
Fibrosis, Liver
CL - Cirrhosis of liver[accessedResource: SNOMEDCT:19943007][accessDate: 04-11-2010]
Liver disease in which the normal microcirculation, the gross vascular anatomy, and the hepatic architecture have been variably destroyed and altered with fibrous septa surrounding regenerated or regenerating parenchymal nodules.
Hepatic cirrhosis[accessedResource: SNOMEDCT:19943007][accessDate: 04-11-2010]
GeneRIF:14961153
GeneRIF:15742396
Liver Fibrosis[accessedResource: MSH:D008103][accessDate: 04-11-2010]
GeneRIF:12631357
NCIt:C15222
diet
The customary allowance of food and drink taken by a person or an animal from day to day, particularly one especially planned to meet specific requirements of the individual, including or excluding certain items of food; a prescribed course of eating and drinking in which the amount and kind of food, as well as the times at which it is to be taken, are regulated for therapeutic purposes or selected with reference to a particular state of health.[accessedResource: NCIt:C15222][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
Dietary[accessedResource: NCIt:C15222][accessDate: 04-11-2010]
Dietary
The customary allowance of food and drink taken by a person or an animal from day to day, particularly one especially planned to meet specific requirements of the individual, including or excluding certain items of food; a prescribed course of eating and drinking in which the amount and kind of food, as well as the times at which it is to be taken, are regulated for therapeutic purposes or selected with reference to a particular state of health.
James Malone
CS57569 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158593&type=germplasm
CS57569
http://www.arabidopsis.org/servlets/TairObject?id=1005158593&type=germplasm
monocyte-derived intermediate cell
James Malone
stomach anlage
An anlage is a tissue modifier describing some tissue which precedes something other, such as a precursor or forerunner for a more mature structure. For example, the stomach anlage.
anlage
MAT:0000478
H54
glioblastoma H54
Glioblastoma H54 is a cell line derived from
James Malone
WI38
GeneRIF:15891640
Complete deafness (finding)
Deafness NOS
Deafness NOS (disorder)[accessedResource: SNOMEDCT:267678002][accessDate: 04-11-2010]
GeneRIF:15464308
GeneRIF:12081719
GeneRIF:15099592
Deafness NOS (disorder)
Deafness, NOS[accessedResource: DOID:10005][accessDate: 04-11-2010]
GeneRIF:12920079
GeneRIF:12062767
GeneRIF:12621333
complete hearing loss[accessedResource: DOID:10005][accessDate: 04-11-2010]
GeneRIF:11977173
GeneRIF:12068628
GeneRIF:11333869
GeneRIF:15542390
GeneRIF:12189493
GeneRIF:12161469
GeneRIF:15905332
GeneRIF:14684684
GeneRIF:16088916
GeneRIF:15996220
Deafness NOS (finding)
GeneRIF:14985365
Bilateral Deafness
GeneRIF:12655418
GeneRIF:14648237
GeneRIF:15326186
GeneRIF:14727813
GeneRIF:12382103
GeneRIF:12717441
A partial or complete loss o f hearing in one or both ears; the level of impairment varies from a mild but important loss of sensitivity to a total loss of hearing.[accessedResource: NCIt:C27644][accessDate: 04-11-2010]
GeneRIF:11907649
James Malone
GeneRIF:16155570
Bilateral deafness (finding)
GeneRIF:14556203
GeneRIF:12403827
GeneRIF:11584050
Total Deafness
GeneRIF:12111646
GeneRIF:12527136
GeneRIF:11432967
DOID:10005
GeneRIF:12505163
GeneRIF:15886106
GeneRIF:15286153
GeneRIF:11668644
SNOMEDCT:267678002
An inherited or acquired condition characterized by the complete loss of the ability to hear from one or both ears.
GeneRIF:12746422
GeneRIF:15083701
GeneRIF:12642503
complete hearing loss
GeneRIF:11807148
GeneRIF:12910270
GeneRIF:15855033
GeneRIF:12687421
GeneRIF:12145746
GeneRIF:14552423
NCIt:C27644
GeneRIF:14644237
GeneRIF:14570705
GeneRIF:15482471
Deafness NOS (finding)[accessedResource: SNOMEDCT:267678002][accessDate: 04-11-2010]
GeneRIF:12904681
GeneRIF:15579465
GeneRIF:12654476
GeneRIF:12393799
GeneRIF:14585957
GeneRIF:12136232
GeneRIF:15350283
GeneRIF:15857852
GeneRIF:15944150
GeneRIF:12107817
GeneRIF:15710493
GeneRIF:12651873
GeneRIF:12127154
GeneRIF:12865758
GeneRIF:12471561
deafness
GeneRIF:12833159
GeneRIF:12064630
GeneRIF:11976689
Bilateral deafness (finding)[accessedResource: DOID:10005][accessDate: 04-11-2010]
GeneRIF:11850618
GeneRIF:12419304
Complete deafness (finding)[accessedResource: DOID:10005][accessDate: 04-11-2010]
A partial or complete loss o f hearing in one or both ears; the level of impairment varies from a mild but important loss of sensitivity to a total loss of hearing.
GeneRIF:12560944
GeneRIF:15490091
GeneRIF:12140191
GeneRIF:12370316
GeneRIF:11870684
GeneRIF:12176036
GeneRIF:12032315
GeneRIF:12792423
GeneRIF:12189487
GeneRIF:14532115
GeneRIF:12968670
Total Deafness[accessedResource: DOID:10005][accessDate: 04-11-2010]
Bilateral Deafness[accessedResource: DOID:10005][accessDate: 04-11-2010]
GeneRIF:12746400
GeneRIF:12080392
GeneRIF:12483295
GeneRIF:15015131
GeneRIF:12620969
GeneRIF:12325029
GeneRIF:12490528
GeneRIF:12075507
GeneRIF:12810983
GeneRIF:11924819
GeneRIF:12393794
GeneRIF:11972037
GeneRIF:12169891
GeneRIF:12114484
GeneRIF:15314067
GeneRIF:15044642
GeneRIF:12022040
GeneRIF:11709538
GeneRIF:12687499
GeneRIF:12384781
GeneRIF:11896458
GeneRIF:12107438
GeneRIF:12172392
GeneRIF:12393046
An inherited or acquired condition characterized by the complete loss of the ability to hear from one or both ears.[accessedResource: NCIt:C27644][accessDate: 04-11-2010]
GeneRIF:15300860
GeneRIF:15226564
GeneRIF:12522556
GeneRIF:12121736
Malignant Mesothelioma of Pleura[accessedResource: NCIt:C7376][accessDate: 04-11-2010]
Malignant Mesothelioma of the Pleura
Mesothelioma (malignant) of pleura (disorder)
GeneRIF:15014036
GeneRIF:15829320
malignant pleural mesothelioma
Malignant Mesothelioma of the Pleura[accessedResource: NCIt:C7376][accessDate: 04-11-2010]
GeneRIF:14719068
James Malone
DOID:7474
malignant mesothelioma of pleura
malignant mesothelioma of pleura (disorder)[accessedResource: DOID:7474][accessDate: 04-11-2010]
SNOMEDCT:254645002
NCIt:C7376
James Malone
Natural Language Generator 8th April 2010
A TERV is a cell line.
A TERV derives from a kidney.
TERV
Infiltrating Ductal Adenocarcinoma
Infiltrating Ductal Carcinoma[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
The most common type of invasive breast carcinoma, accounting for approximately 70% of breast carcinomas. The gross appearance is usually typical with an irregular stellate outline. Microscopically, randomly arranged epithelial elements are seen. When large sheets of malignant cells are present, necrosis may be seen. With adequate tissue sampling, in situ carcinoma can be demonstrated in association with the infiltrating carcinoma. The in situ component is nearly always ductal but occasionally may be lobular or both.
Infiltrating Ductal Adenocarcinoma[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Tomasz Adamusiak
Invasive Ductal Breast Carcinoma
Infiltrating Ductal Carcinoma of Breast[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Invasive Ductal Carcinoma, No Specific Type[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Invasive Ductal Carcinoma, No Specific Type
Infiltrating Ductal Breast Carcinoma
Invasive Ductal Carcinoma, NST[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Infiltrating Ductal Carcinoma of Breast
Invasive Ductal Adenocarcinoma
Invasive Ductal Breast Carcinoma[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Invasive Ductal Carcinoma of Breast
NCIt:C4194
Invasive Ductal Carcinoma, NST
Infiltrating Ductal Breast Carcinoma[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Invasive Ductal Carcinoma, NOS[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Infiltrating Ductal Carcinoma
Invasive Ductal Adenocarcinoma[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
invasive ductal carcinoma
Infiltrating Ductal Carcinoma of the Breast[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
The most common type of invasive breast carcinoma, accounting for approximately 70% of breast carcinomas. The gross appearance is usually typical with an irregular stellate outline. Microscopically, randomly arranged epithelial elements are seen. When large sheets of malignant cells are present, necrosis may be seen. With adequate tissue sampling, in situ carcinoma can be demonstrated in association with the infiltrating carcinoma. The in situ component is nearly always ductal but occasionally may be lobular or both.[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Invasive Ductal Carcinoma of the Breast
Invasive Ductal Carcinoma of Breast[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Infiltrating Ductal Carcinoma of the Breast
Invasive Ductal Carcinoma, Not Otherwise Specified
Invasive Ductal Carcinoma, Not Otherwise Specified[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
Invasive Ductal Carcinoma, NOS
James Malone
Invasive Ductal Carcinoma of the Breast[accessedResource: NCIt:C4194][accessDate: 04-11-2010]
A cell with empty-appearing cytoplasm when viewed with a light microscope.[accessedResource: NCIt:C12478][accessDate: 04-11-2010]
Clear Cells[accessedResource: NCIt:C12478][accessDate: 04-11-2010]
Tomasz Adamusiak
A cell with empty-appearing cytoplasm when viewed with a light microscope.
clear cell
NCIt:C12478
Clear Cells
ch
scolopophorous organ
scolopophorous organ[accessedResource: FBbt:00005215][accessDate: 04-11-2010]
MAT:0000209
FBbt:00005215
An auditory and vibration detector in insects[accessedResource: MAT:0000209][accessDate: 04-11-2010]
James Malone
chordotonal organ
Mechanosensory organ, generally attached to the body wall and consisting of one or more scolopidia.[accessedResource: FBbt:00005215][accessDate: 04-11-2010]
ch[accessedResource: FBbt:00005215][accessDate: 04-11-2010]
An auditory and vibration detector in insects
Mechanosensory organ, generally attached to the body wall and consisting of one or more scolopidia.
Chordotonal organs are arthropod sensory structures consisting of special sensilla called the scolopidia, which are mechano-transducers and respond mainly to stretch or flexion. In insects, they consist of bundles of internal sensilla, each of which has a cap cell, an enveloping cell and one or more sense cells. The distal end of the organ is usually attached to the cuticle of the body wall, marked by a pit, a thickened disc or a nodule of chitin, and the base of the organ is connected with the hypodermis, often by a special ligament.
GeneRIF:15696078
GeneRIF:15003938
GeneRIF:11801688
Exercise-induced asthma
GeneRIF:12234263
Asthma, unspecified[accessedResource: ICD9:493.9][accessDate: 04-11-2010]
GeneRIF:15602630
GeneRIF:16123393
GeneRIF:16027362
GeneRIF:15976383
GeneRIF:14610476
GeneRIF:16081847
GeneRIF:12876407
GeneRIF:12847279
GeneRIF:12482203
GeneRIF:12754192
GeneRIF:15007353
GeneRIF:15722346
GeneRIF:15223611
GeneRIF:11692107
GeneRIF:16081038
Hyperreactive airway disease[accessedResource: SNOMEDCT:195967001][accessDate: 04-11-2010]
Bronchial hyperresponsiveness
GeneRIF:15585884
GeneRIF:12170265
GeneRIF:15007350
GeneRIF:14564349
James Malone
BHR - Bronchial hyperreactivity[accessedResource: SNOMEDCT:195967001][accessDate: 04-11-2010]
chronic obstructive asthma with status asthmaticus[accessedResource: DOID:2841][accessDate: 04-11-2010]
Hyperreactive airway disease
Bronchial hyperresponsiveness[accessedResource: SNOMEDCT:195967001][accessDate: 04-11-2010]
GeneRIF:12730147
GeneRIF:11994485
GeneRIF:12530118
GeneRIF:15100674
Hyperreactive airways disease
GeneRIF:16043121
GeneRIF:15318163
Asthma, unspecified type, with acute exacerbation[accessedResource: ICD9:493.92][accessDate: 04-11-2010]
Pneumopathy due to inhalation of other dust
A bronchial disease that is characterized by chronic inflammation and narrowing of the airways, which is caused by a combination of environmental and genetic factors resulting in recurring periods of wheezing (a whistling sound while breathing), chest tightness, shortness of breath, mucus production and coughing. The symptoms appear due to a variety of triggers such as allergens, irritants, respiratory infections, weather changes, excercise, stress, reflux disease, medications, foods and emotional anxiety.[accessedResource: DOID:2841][accessDate: 04-11-2010]
GeneRIF:11668616
GeneRIF:12861851
SNOMEDCT:196013003
Asthma, unspecified type, without mention of status asthmaticus
GeneRIF:12754510
GeneRIF:16236836
Asthma NOS (disorder)[accessedResource: SNOMEDCT:266365004][accessDate: 04-11-2010]
Pneumopathy due to inhalation of other dust NOS
Asthma (disorder)[accessedResource: SNOMEDCT:195967001][accessDate: 04-11-2010]
GeneRIF:15743779
GeneRIF:12091879
ICD9:504
GeneRIF:15192232
GeneRIF:14718253
GeneRIF:16143586
GeneRIF:15817799
GeneRIF:11709756
Other forms of asthma[accessedResource: ICD9:493.8][accessDate: 04-11-2010]
GeneRIF:16236890
GeneRIF:15039137
GeneRIF:15634264
GeneRIF:16021473
GeneRIF:12794006
GeneRIF:15179560
GeneRIF:12594058
GeneRIF:16024972
GeneRIF:11842300
SNOMEDCT:195967001
DOID:2841
GeneRIF:15853952
DUST PNEUMONOPATHY NEC
GeneRIF:15709049
GeneRIF:11842292
SNOMEDCT:196015005
GeneRIF:16034130
ICD9:493.90
GeneRIF:12900517
GeneRIF:12045241
GeneRIF:16000330
GeneRIF:12847242
NCIt:C28397
GeneRIF:15059493
GeneRIF:12083965
Bronchial asthma[accessedResource: SNOMEDCT:195967001][accessDate: 04-11-2010]
GeneRIF:16115819
GeneRIF:16148052
Hyperreactive airways disease[accessedResource: SNOMEDCT:195979001][accessDate: 04-11-2010]
GeneRIF:11953202
GeneRIF:12237016
Asthma NOS
GeneRIF:11897983
GeneRIF:12530117
GeneRIF:15696081
GeneRIF:15356557
GeneRIF:14707054
Pneumopathy due to inhalation of other dust (disorder)
GeneRIF:15345705
GeneRIF:16150927
GeneRIF:11896460
GeneRIF:15496624
GeneRIF:12642833
GeneRIF:11710537
GeneRIF:12077275
GeneRIF:15467329
asthma
GeneRIF:12063521
GeneRIF:12204872
GeneRIF:15300848
GeneRIF:14761934
A chronic respiratory disease manifested as difficulty breathing due to the narrowing of bronchial passageways.
GeneRIF:15059480
Asthma unspecified (disorder)[accessedResource: SNOMEDCT:195979001][accessDate: 04-11-2010]
GeneRIF:14597484
GeneRIF:12774669
GeneRIF:15528385
Bronchial asthma
ICD9:493
SNOMEDCT:266365004
GeneRIF:15557163
Asthma, unspecified type, without mention of status asthmaticus[accessedResource: ICD9:493.90][accessDate: 04-11-2010]
GeneRIF:11786643
GeneRIF:15579447
GeneRIF:12063528
Exercise-induced asthma (disorder)[accessedResource: DOID:2841][accessDate: 04-11-2010]
GeneRIF:12396623
GeneRIF:12376349
GeneRIF:15744536
GeneRIF:15941840
GeneRIF:15710598
GeneRIF:11466391
GeneRIF:12682233
Pneumonopathy due to inhalation of other dust[accessedResource: ICD9:504][accessDate: 04-11-2010]
GeneRIF:12406828
GeneRIF:12646606
chronic obstructive asthma with status asthmaticus
Pneumopathy due to inhalation of other dust NOS (disorder)[accessedResource: SNOMEDCT:196015005][accessDate: 04-11-2010]
GeneRIF:11972486
GeneRIF:15879427
BHR - Bronchial hyperreactivity
Pneumonopathy due to inhalation of other dust
GeneRIF:12671058
GeneRIF:15105161
GeneRIF:15066132
GeneRIF:15148962
Other forms of asthma
GeneRIF:12373000
Asthma (disorder)
ASTHMA NOS[accessedResource: ICD9:493.90][accessDate: 04-11-2010]
GeneRIF:15356558
GeneRIF:12165540
ICD9:493.8
GeneRIF:11725301
GeneRIF:12672051
GeneRIF:11907124
GeneRIF:14734765
GeneRIF:15961692
Pneumopathy due to inhalation of other dust NOS[accessedResource: SNOMEDCT:196015005][accessDate: 04-11-2010]
GeneRIF:15051937
GeneRIF:15454733
GeneRIF:11839568
GeneRIF:15201134
GeneRIF:15604153
GeneRIF:12530121
Bronchial hypersensitivity[accessedResource: DOID:2841][accessDate: 04-11-2010]
GeneRIF:12091169
GeneRIF:15478389
GeneRIF:12370400
Airway hyperreactivity
GeneRIF:14692664
GeneRIF:15947423
Exercise-induced asthma[accessedResource: DOID:2841][accessDate: 04-11-2010]
GeneRIF:12751728
GeneRIF:15087305
GeneRIF:12915771
DUST PNEUMONOPATHY NEC[accessedResource: ICD9:504][accessDate: 04-11-2010]
GeneRIF:15115168
chronic obstructive asthma[accessedResource: DOID:2841][accessDate: 04-11-2010]
GeneRIF:16036415
GeneRIF:15677460
GeneRIF:12325261
GeneRIF:15153795
GeneRIF:14682393
GeneRIF:15020290
GeneRIF:15356575
chronic obstructive asthma with acute exacerbation[accessedResource: DOID:2841][accessDate: 04-11-2010]
GeneRIF:11907117
GeneRIF:14520724
GeneRIF:11466392
Airway hyperreactivity[accessedResource: SNOMEDCT:195967001][accessDate: 04-11-2010]
GeneRIF:11912176
Asthmatic
ICD9:493.92
GeneRIF:14564352
GeneRIF:14764726
GeneRIF:15988535
Exercise-induced asthma (disorder)
GeneRIF:11692112
SNOMEDCT:195979001
Asthma, unspecified
GeneRIF:16210640
GeneRIF:12145647
GeneRIF:16215326
Asthma, unspecified type, with acute exacerbation
GeneRIF:12209087
Pneumopathy due to inhalation of other dust NOS (disorder)
GeneRIF:16304252
GeneRIF:12938094
ICD9:493.9
GeneRIF:16026590
GeneRIF:15059478
GeneRIF:12626595
GeneRIF:12813022
GeneRIF:14633511
GeneRIF:11813133
A bronchial disease that is characterized by chronic inflammation and narrowing of the airways, which is caused by a combination of environmental and genetic factors resulting in recurring periods of wheezing (a whistling sound while breathing), chest tightness, shortness of breath, mucus production and coughing. The symptoms appear due to a variety of triggers such as allergens, irritants, respiratory infections, weather changes, excercise, stress, reflux disease, medications, foods and emotional anxiety.
GeneRIF:15073379
GeneRIF:15282200
GeneRIF:11972612
chronic obstructive asthma with acute exacerbation
GeneRIF:14754534
Pneumopathy due to inhalation of other dust[accessedResource: SNOMEDCT:196013003][accessDate: 04-11-2010]
GeneRIF:15548573
GeneRIF:15531759
GeneRIF:14734780
Asthma unspecified (disorder)
GeneRIF:15131571
GeneRIF:15007351
Pneumopathy due to inhalation of other dust (disorder)[accessedResource: SNOMEDCT:196013003][accessDate: 04-11-2010]
GeneRIF:16098057
ASTHMA NOS W (AC) EXAC[accessedResource: ICD9:493.92][accessDate: 04-11-2010]
GeneRIF:14657873
GeneRIF:12110844
GeneRIF:12897738
GeneRIF:14657864
GeneRIF:11956218
ASTHMA NOS W (AC) EXAC
GeneRIF:12575459
chronic obstructive asthma
GeneRIF:12915772
bronchial hyperreactivity[accessedResource: DOID:2841][accessDate: 04-11-2010]
GeneRIF:12789231
Bronchial hypersensitivity
GeneRIF:15723126
GeneRIF:11940068
Asthmatic[accessedResource: SNOMEDCT:195967001][accessDate: 04-11-2010]
GeneRIF:11744622
GeneRIF:16168397
GeneRIF:12204890
GeneRIF:12047364
GeneRIF:15282199
Asthma NOS (disorder)
GeneRIF:15612961
GeneRIF:12568496
GeneRIF:15764725
GeneRIF:12620968
GeneRIF:15207712
GeneRIF:11898000
GeneRIF:12225952
Bronchial hyperreactivity
A chronic respiratory disease manifested as difficulty breathing due to the narrowing of bronchial passageways.[accessedResource: NCIt:C28397][accessDate: 04-11-2010]
GeneRIF:12897754
GeneRIF:12524255
GeneRIF:15944327
paroxetine maleate
STRUCTURE_Formula:C23H24FNO7
CASRN:64006-44-6
DSSTox_Generic_SID:42590
James Malone
Tomasz Adamusiak
Ele Holloway
STRUCTURE_ChemicalName_IUPAC:(3S,4R)-3-[(1,3-benzodioxol-5-yloxy)methyl]-4-(4-fluorophenyl)piperidine (2Z)-but-2-enedioate
DSSTox_CID:22590
James Malone
C3H/HeJ is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/000659.html
C3H/HeJ
JAX:000659
Tomasz Adamusiak
central brain primordium
FBbt:00005542
James Malone
HCC193
histiocyte
CL:0000235
macrophage
James Malone
macrophagocyte
A mononuclear phagocyte which differentiates from monocytes, is typically resident in a particular tissue, and capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells (Cell Ontology).
bone marrow-derived macrophage
A mononuclear phagocyte present in variety of tissues, typically differentiated from monocytes, capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells.
A mononuclear phagocyte which differentiates from monocytes, is typically resident in a particular tissue, and capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells (Cell Ontology).[accessedResource: NIFSTD:sao185843373][accessDate: 04-11-2010]
Relatively long-lived phagocytic cell of mammalian tissues, derived from blood monocyte. Macrophages from different sites have distinctly different properties. Main types are peritoneal and alveolar macrophages, tissue macrophages (histiocytes), Kuppfer cells of the liver, and osteoclasts. In response to foreign materials may become stimulated or activated. Macrophages play an important role in killing of some bacteria, protozoa, and tumour cells, release substances that stimulate other cells of the immune system, and are involved in antigen presentation. May further differentiate within chronic inflammatory lesions to epithelioid cells or may fuse to form foreign body giant cells or Langhans' giant cells.[accessedResource: BTO:0000801][accessDate: 04-11-2010]
monocyte-derived macrophage
macrophagocyte[accessedResource: BTO:0000801][accessDate: 04-11-2010]
A mononuclear phagocyte present in variety of tissues, typically differentiated from monocytes, capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells.[accessedResource: CL:0000235][accessDate: 04-11-2010]
Tomasz Adamusiak
Relatively long-lived phagocytic cell of mammalian tissues, derived from blood monocyte. Macrophages from different sites have distinctly different properties. Main types are peritoneal and alveolar macrophages, tissue macrophages (histiocytes), Kuppfer cells of the liver, and osteoclasts. In response to foreign materials may become stimulated or activated. Macrophages play an important role in killing of some bacteria, protozoa, and tumour cells, release substances that stimulate other cells of the immune system, and are involved in antigen presentation. May further differentiate within chronic inflammatory lesions to epithelioid cells or may fuse to form foreign body giant cells or Langhans' giant cells.
NIFSTD:sao185843373
BTO:0000801
histiocyte[accessedResource: CL:0000235][accessDate: 04-11-2010]
Ele Holloway
James Malone
true
1.8
duplicate of EFO_0002067 (K562)
obsolete_K562
adrenocorticotropic hormone
40808
9002-60-2
ACTH
James Malone
http://www.ebi.ac.uk/efo/EFO_0002031
A biexponential transformation is a data transformation that, for each (one dimensional) real number input x, outputs an approximation (found, e.g. with the Newton's method) to a solution y of the equation B(y)-x=0, where B denotes a b transformation.
biexponential transformation
Ele Holloway
James Malone
CaHPV10
A somewhat elongate usually horizontal subterranean plant stem that is often thickened by deposits of reserve food material, produces shoots above and roots below, and is distinguished from a true root in possessing buds, nodes, and usually scalelike leaves.
GRO:0005811
rhizome
BTO:0001181
A somewhat elongate usually horizontal subterranean plant stem that is often thickened by deposits of reserve food material, produces shoots above and roots below, and is distinguished from a true root in possessing buds, nodes, and usually scalelike leaves.[accessedResource: BTO:0001181][accessDate: 04-11-2010]
James Malone
MAT:0000219
PO:0004542
GRO:0005811[accessedResource: BTO:0001181][accessDate: 04-11-2010]
A0antEndo[accessedResource: FBbt:00005418][accessDate: 04-11-2010]
James Malone
anterior endoderm anlage in statu nascendi
FBbt:00005418
A0antEndo
(2,4-dichlorophenoxy)acetic acid
(2,4-dichlorophenoxy)acetic acid
20442
442
94-75-7
C8H6Cl2O3
2,4-D; 2,4-dichlorophenoxyacetic acid
Embryologic[accessedResource: NCIt:C28147][accessDate: 04-11-2010]
James Malone
embryo
NCIt:C28147
Embryologic
embryo early (growth) stage
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hybridization_chamber[accessedResource: MO_563][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0002019
A container which is used to maintain constant contact of a liquid on an array. This can be either a glass vial or slide.
hybridization chamber
MO_563
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hybridization_chamber
James Malone
DOID:3458
breast adenocarcinoma
James Malone
CS57572 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158596&type=germplasm
CS57572
http://www.arabidopsis.org/servlets/TairObject?id=1005158596&type=germplasm
Ele Holloway
James Malone
DMS79
DMS-79
Tomasz Adamusiak
symplectic
ZFA:0000692
Tomasz Adamusiak
hyoid muscle
ZFA:0000521
Ele Holloway
James Malone
Tomasz Adamusiak
depudecin
CASRN:139508-73-9
Primary dilated cardiomyopathy
GeneRIF:15034580
COCM - Congestive cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 04-11-2010]
DOID:12930
A form of CARDIAC MUSCLE disease that is characterized by ventricular dilation, VENTRICULAR DYSFUNCTION, and HEART FAILURE. Risk factors include SMOKING; ALCOHOL DRINKING; HYPERTENSION; INFECTION; PREGNANCY; and mutations in the LMNA gene encoding LAMIN TYPE A, a NUCLEAR LAMINA protein.
HP:0001644
GeneRIF:16288714
GeneRIF:15347805
SNOMEDCT:195021004
GeneRIF:11896212
Congestive Cardiomyopathies
GeneRIF:12642359
Cardiomyopathy, Dilated, LMNA
Cardiomyopathy, Dilated, CMD1A
Congestive Cardiomyopathies[accessedResource: MSH:D002311][accessDate: 04-11-2010]
GeneRIF:12920582
Congestive cardiomyopathy (disorder)
MP:0002795
MSH:D002311
GeneRIF:12197595
Congestive dilated cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 04-11-2010]
A form of CARDIAC MUSCLE disease that is characterized by ventricular dilation, VENTRICULAR DYSFUNCTION, and HEART FAILURE. Risk factors include SMOKING; ALCOHOL DRINKING; HYPERTENSION; INFECTION; PREGNANCY; and mutations in the LMNA gene encoding LAMIN TYPE A, a NUCLEAR LAMINA protein.[accessedResource: MSH:D002311][accessDate: 04-11-2010]
Congestive cardiomyopathy (disorder)[accessedResource: SNOMEDCT:399020009][accessDate: 04-11-2010]
GeneRIF:12628722
CCM - Congestive cardiomyopathy
GeneRIF:11950896
GeneRIF:11984589
GeneRIF:11846417
GeneRIF:15146952
GeneRIF:11972068
GeneRIF:12644006
Idiopathic Cardiomyopathies, Familial
CCM - Congestive cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 04-11-2010]
GeneRIF:14660611
Cardiomyopathy, Familial Idiopathic[accessedResource: MSH:D002311][accessDate: 04-11-2010]
primary dilated cardiomyopathy (disorder)
GeneRIF:15601645
SNOMEDCT:399020009
GeneRIF:12869376
decreased function of the heart associated with cardiac enlargement and congestive heart failure
GeneRIF:12072561
primary dilated cardiomyopathy (disorder)[accessedResource: DOID:12930][accessDate: 04-11-2010]
Cardiomyopathies, Dilated
GeneRIF:11897440
GeneRIF:15340063
GeneRIF:12163370
Dilated Cardiomyopathies[accessedResource: MSH:D002311][accessDate: 04-11-2010]
congestive cardiomyopathy[accessedResource: MP:0002795][accessDate: 04-11-2010]
Primary dilated cardiomyopathy[accessedResource: SNOMEDCT:195021004][accessDate: 04-11-2010]
GeneRIF:15735644
Familial Idiopathic Cardiomyopathy
GeneRIF:15345656
GeneRIF:12628721
GeneRIF:11792810
Cardiomyopathy, Dilated, with Conduction Deffect1
Congestive dilated cardiomyopathy
GeneRIF:15080529
GeneRIF:15485910
GeneRIF:15833432
GeneRIF:12359139
Cardiomyopathy, Dilated, with Conduction Deffect1[accessedResource: MSH:D002311][accessDate: 04-11-2010]
Cardiomyopathy, Dilated, LMNA[accessedResource: MSH:D002311][accessDate: 04-11-2010]
GeneRIF:12912811
Congestive cardiomyopathy
decreased function of the heart associated with cardiac enlargement and congestive heart failure[accessedResource: MP:0002795][accessDate: 04-11-2010]
DCM - Dilated cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 04-11-2010]
GeneRIF:14625273
Tomasz Adamusiak
GeneRIF:14575316
GeneRIF:15238456
Cardiomyopathies, Familial Idiopathic[accessedResource: MSH:D002311][accessDate: 04-11-2010]
GeneRIF:12610310
dilated cardiomyopathy
GeneRIF:12177436
James Malone
GeneRIF:15763499
DCM - Dilated cardiomyopathy
COCM - Congestive cardiomyopathy
Cardiomyopathy, Dilated, CMD1A[accessedResource: MSH:D002311][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0001693
true
A derived unit which is a standard measure of the amount of a 2-dimensional flat surface.
area unit
James Malone
UO:0000047
An area unit is a derived unit which is a standard measure of the amount of a 2-dimensional flat surface.
Plexiform neurofibroma (morphologic abnormality)[accessedResource: SNOMEDCT:41252002][accessDate: 04-11-2010]
Tomasz Adamusiak
Elephantiasis Neuromatosis
NIFSTD:birnlex_12606
Pachydermatoceles[accessedResource: MSH:D018318][accessDate: 04-11-2010]
Pachydermatoceles
Neuromas, Plexiform[accessedResource: MSH:D018318][accessDate: 04-11-2010]
SNOMEDCT:41252002
A type of neurofibroma manifesting as a diffuse overgrowth of subcutaneous tissue, usually involving the face, scalp, neck, and chest but occasionally occurring in the abdomen or pelvis. The tumors tend to progress, and may extend along nerve roots to eventually involve the spinal roots and spinal cord. This process is almost always a manifestation of NEUROFIBROMATOSIS 1. (From Adams et al., Principles of Neurology, 6th ed, p1016; J Pediatr 1997 Nov;131(5):678-82)
Tumor Royale[accessedResource: NIFSTD:birnlex_12606][accessDate: 04-11-2010]
NCIt:C3797
DOID:5151
MSH:D018318
An elongated and multinodular neurofibroma, formed when the tumor involves either multiple trunks of a plexus or multiple fascicles of a large nerve, such as the sciatic. Some plexiform neurofibromas resemble a bag of worms, others produce a massive ropy enlargement of the nerve. (Adapted from WHO.)
plexiform neurofibroma
Neuroma, Plexiform[accessedResource: MSH:D018318][accessDate: 04-11-2010]
Elephantiasis Neuromatoses[accessedResource: MSH:D018318][accessDate: 04-11-2010]
Pachydermatocele[accessedResource: NIFSTD:birnlex_12606][accessDate: 04-11-2010]
Plexiform Neuroma
Plexiform neurofibroma (disorder)[accessedResource: SNOMEDCT:403818001][accessDate: 04-11-2010]
Elephantiasis Neuromatosis[accessedResource: NIFSTD:birnlex_12606][accessDate: 04-11-2010]
Neurofibromas, Plexiform[accessedResource: MSH:D018318][accessDate: 04-11-2010]
James Malone
Plexiform neurofibroma (morphologic abnormality)
Plexiform neurofibroma (disorder)
Pachydermatocele
A type of neurofibroma manifesting as a diffuse overgrowth of subcutaneous tissue, usually involving the face, scalp, neck, and chest but occasionally occurring in the abdomen or pelvis. The tumors tend to progress, and may extend along nerve roots to eventually involve the spinal roots and spinal cord. This process is almost always a manifestation of NEUROFIBROMATOSIS 1. (From Adams et al., Principles of Neurology, 6th ed, p1016; J Pediatr 1997 Nov;131(5):678-82)[accessedResource: MSH:D018318][accessDate: 04-11-2010]
GeneRIF:12782393
SNOMEDCT:403818001
Plexiform Neurofibromas
Tumor Royale
A type of neurofibroma manifesting as a diffuse overgrowth of subcutaneous tissue, usually involving the face, scalp, neck, and chest but occasionally occurring in the abdomen or pelvis. The tumors tend to progress, and may extend along nerve roots to eventually involve the spinal roots and spinal cord. This process is almost always a manifestation of NEUROFIBROMATOSIS 1 (MeSH).[accessedResource: NIFSTD:birnlex_12606][accessDate: 04-11-2010]
A type of neurofibroma manifesting as a diffuse overgrowth of subcutaneous tissue, usually involving the face, scalp, neck, and chest but occasionally occurring in the abdomen or pelvis. The tumors tend to progress, and may extend along nerve roots to eventually involve the spinal roots and spinal cord. This process is almost always a manifestation of NEUROFIBROMATOSIS 1 (MeSH).
GeneRIF:11857752
Elephantiasis Neuromatoses
Neuromas, Plexiform
An elongated and multinodular neurofibroma, formed when the tumor involves either multiple trunks of a plexus or multiple fascicles of a large nerve, such as the sciatic. Some plexiform neurofibromas resemble a bag of worms, others produce a massive ropy enlargement of the nerve. (Adapted from WHO.)[accessedResource: NCIt:C3797][accessDate: 04-11-2010]
BTO:0000738
Human acute myeloid leukemia established from the peripheral blood of a 35-year-old woman with acute myeloid leukemia (AML FAB M2) in 1976.[accessedResource: BTO:0000738][accessDate: 10-05-2010]
2.1
Human acute myeloid leukemia established from the peripheral blood of a 35-year-old woman with acute myeloid leukemia (AML FAB M2) in 1976.
obsolete_HL60
HL60 cell
duplicate with EFO_0002793
HL-60 cell[accessedResource: BTO:0000738][accessDate: 10-05-2010]
true
James Malone
HL-60
HL60 cell[accessedResource: BTO:0000738][accessDate: 10-05-2010]
HL-60 cell
Ele Holloway
Ele Holloway
James Malone
ABC-1
JCRB0815
Ele Holloway
James Malone
HuT78
Tomasz Adamusiak
posterior lateral line nerve
ZFA:0000175
tempol
Tomasz Adamusiak
floor plate rhombomere 4
ZFA:0000893
Ele Holloway
James Malone
SCaBER
Tomasz Adamusiak
pectoral fin cartilage
ZFA:0000257
oxaliplatin
16760
36760
61825-94-3
C8H12N2O4Pt
[(1R,2R)-cyclohexane-1,2-diamine-k2N,N'][ethanedioato(2-)-k2O1,O2]platinum
James Malone
postmenopausal
NCIt:C15421
Ele Holloway
James Malone
66cl4
midbrain
EV:0100242
The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally.[accessedResource: ZFA:0000128][accessDate: 04-11-2010]
FMAID:61993
MAT:0000106
mesencephalon
NIFSTD:birnlex_1667
TAO:0000128
BTO:0000138
mesencephalon[accessedResource: TAO:0000128][accessDate: 04-11-2010]
EMAPA:16974
The middle of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain.[accessedResource: BTO:0000138][accessDate: 04-11-2010]
James Malone
The middle of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain.
MA:0000207
Tomasz Adamusiak
The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally. Kimmel et al, 1995.[accessedResource: TAO:0000128][accessDate: 04-11-2010]
XAO:0000014
EHDAA:3694
The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally. Kimmel et al, 1995.
ZFA:0000128
SAEL:68
Organ component of neuraxis that has as its parts the tectum, cerebral peduncle, midbrain tegmentum and cerebral aqueduct. Examples: There is only one midbrain.
The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally.
MFO:0002420
Tomasz Adamusiak
mid cerebral vein
ZFA:0005010
James Malone
A549
BTO:0000286
NCIt:C12342
cornea[accessedResource: BTO:0000286][accessDate: 04-11-2010]
Cornea
The transparent part of the coat of the eyeball that covers the iris and pupil and admits light to the interior.
cornea structure
James Malone
A dome-shaped, transparent, avascular tissue covering the front of the eye. It is composed of five layers: squamous epithelium, Bowman's membrane, stroma, Descemet's membrane, and endothelium. Refraction of light contributing to eye's focusing ability is its characteristic function. It contains unmyelinated nerve endings which are responsible for the high sensitivity of the tissue.
The transparent part of the coat of the eyeball that covers the iris and pupil and admits light to the interior.[accessedResource: BTO:0000286][accessDate: 04-11-2010]
A dome-shaped, transparent, avascular tissue covering the front of the eye. It is composed of five layers: squamous epithelium, Bowman's membrane, stroma, Descemet's membrane, and endothelium. Refraction of light contributing to eye's focusing ability is its characteristic function. It contains unmyelinated nerve endings which are responsible for the high sensitivity of the tissue.[accessedResource: NCIt:C12342][accessDate: 04-11-2010]
James Malone
GM07034
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#in_vivo_design[accessedResource: MO_454][accessDate: 04-11-2010]
Tomasz Adamusiak
in vivo design
MO_454
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#in_vivo_design
Tomasz Adamusiak
pectoral fin musculature
ZFA:0000563
MKN1
MKN1 cell[accessedResource: BTO:0002384][accessDate: 04-11-2010]
BTO:0002384
MKN-1
MKN-1 cell
Ele Holloway
JCRB0252
Human gastric adenosquamous carcinoma cell line.[accessedResource: BTO:0002384][accessDate: 04-11-2010]
Human gastric adenosquamous carcinoma cell line.
MKN-1 cell[accessedResource: BTO:0002384][accessDate: 04-11-2010]
MKN1 cell
James Malone
James Malone
NCI-H2279
H2279
CHEBI:26764
Steroidhormon
hormona esteroide
hormones steroides
hormone steroide
Steroidhormone
hormonas esteroideas
http://www.ebi.ac.uk/efo/EFO_0001614
steroid hormones
Any steroid that act as hormone.
steroid hormone
sublimate
InChI=1/2ClH.Hg/h2*1H;/q;;+2/p-2/f2Cl.Hg/h2*1h;/q2*-1;m
mercury(2+) chloride
mercury(II) chloride
mercury dichloride
corrosive mercury chloride
CHEBI:31823
Cl[Hg]Cl
bichlorure de mercure
Mercuric chloride
perchloride of mercury
mercury bichloride
chlorure mercurique
A mercury coordination entity that has formula Cl2Hg.
Sublimat
James Malone
InChIKey=LWJROJCJINYWOX-ZZJRNXLTCY
dichloromercury
mercury perchloride
corrosive sublimate
ClHgCl
hydrargyrum bichloratum
Cl2Hg
Quecksilber(II)-chlorid
dichlorure de mercure
A white powder or crystalline solid made up of linear triatomic molecules in which a mercury atom is bonded to two chlorines. Water-soluble, it is highly toxic. Once used in a wide variety of applications, including preserving wood and anatomical specimens, embalming and disinfecting, as an intensifier in photography, as a mordant for rabbit and beaver furs, and freeing gold from lead, its use has markedly declined as less toxic alternatives have been developed.
HgCl2
Sulema
mercuric bichloride
http://www.ebi.ac.uk/efo/EFO_0001671
ICD9:365.89
GeneRIF:15823921
GeneRIF:12789547
Other specified glaucoma NOS
GLAUCOMA NEC[accessedResource: ICD9:365.89][accessDate: 04-11-2010]
GeneRIF:15509533
SNOMEDCT:193559002
ICD9:365
GeneRIF:15677485
Glaucoma NOS (disorder)
GeneRIF:12811537
Other specified glaucoma[accessedResource: ICD9:365.89][accessDate: 04-11-2010]
GeneRIF:12828935
Glaucoma associated with other ocular disorders[accessedResource: ICD9:365.6][accessDate: 04-11-2010]
Glaucoma associated with other ocular disorders NOS[accessedResource: SNOMEDCT:193565002][accessDate: 04-11-2010]
GeneRIF:15579465
Glaucoma associated with other ocular disorders
GLAUCOMA NOS[accessedResource: ICD9:365.9][accessDate: 04-11-2010]
Glaucoma NOS
Glaucoma associated with other ocular disorders (disorder)[accessedResource: SNOMEDCT:193559002][accessDate: 04-11-2010]
SNOMEDCT:193566001
Glaucoma associated with other ocular disorders (disorder)
NCIt:C26782
GeneRIF:15370540
GeneRIF:12920093
Other specified glaucoma NOS (disorder)[accessedResource: SNOMEDCT:193568000][accessDate: 04-11-2010]
GeneRIF:15638362
GeneRIF:14740993
Other specified forms of glaucoma
GeneRIF:15557444
GeneRIF:12655282
ICD9:365.9
GeneRIF:14725620
Glaucoma NOS (disorder)[accessedResource: SNOMEDCT:193569008][accessDate: 04-11-2010]
James Malone
GeneRIF:15342693
GeneRIF:15723004
SNOMEDCT:193569008
GLAUCOMA NEC
GeneRIF:15895394
Other specified glaucoma NOS (disorder)
Other specified forms of glaucoma (disorder)[accessedResource: SNOMEDCT:193566001][accessDate: 04-11-2010]
GeneRIF:15519534
Other specified glaucoma
Increased pressure in the eyeball due to obstruction of the outflow of aqueous humor.
Glaucoma associated with other ocular disorders NOS
SNOMEDCT:193565002
glaucoma
GeneRIF:15498064
GeneRIF:12060848
Glaucoma associated with other ocular disorders NOS (disorder)[accessedResource: SNOMEDCT:193565002][accessDate: 04-11-2010]
Other specified forms of glaucoma (disorder)
GeneRIF:12073024
Other specified glaucoma NOS[accessedResource: SNOMEDCT:193568000][accessDate: 04-11-2010]
Increased pressure in the eyeball due to obstruction of the outflow of aqueous humor.[accessedResource: NCIt:C26782][accessDate: 04-11-2010]
ICD9:365.6
Unspecified glaucoma
GeneRIF:12676895
Unspecified glaucoma[accessedResource: ICD9:365.9][accessDate: 04-11-2010]
GeneRIF:15326130
ICD9:365.8
Glaucoma (disorder)
Glaucoma associated with other ocular disorders NOS (disorder)
GeneRIF:11910561
DOID:1686
SNOMEDCT:23986001
GeneRIF:15304601
SNOMEDCT:193568000
GeneRIF:11774072
GeneRIF:16043855
Glaucoma (disorder)[accessedResource: SNOMEDCT:23986001][accessDate: 04-11-2010]
Other specified forms of glaucoma[accessedResource: SNOMEDCT:193566001][accessDate: 04-11-2010]
GeneRIF:12687498
GeneRIF:16103353
Ele Holloway
James Malone
C33A
Tomasz Adamusiak
The ILSXISS#/Tej recombinant inbred (RI) strains originate from crosses between ILS/IbgTejJ (009324) and ISS/IbgTejJ (009325) They may be used to study the genetics of neurogenetic, neuropharmacological and behavioral phenotypes involved in alcohol-related traits and complex or potentially complex physiologic phenotypes (including differences in longevity under ad libitum and dietary restriction conditions, aging, body temperature and body weight).
ILSXISS#/Tej
PMID:15457343
http://jaxmice.jax.org/strain/009257.html
Bronchiolar carcinoma[accessedResource: SNOMEDCT:373627005][accessDate: 04-11-2010]
Bronchioloalveolar Adenocarcinoma of the Lung[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Bronchioalveolar Adenocarcinoma of the Lung
Bronchiolar adenocarcinoma
Bronchioloalveolar carcinoma - disorder
Carcinoma, Alveolar[accessedResource: MSH:D002282][accessDate: 04-11-2010]
SNOMEDCT:36310008
Carcinomas, Alveolar
Bronchioalveolar Adenocarcinoma of the Lung[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Alveolar cell carcinoma[accessedResource: SNOMEDCT:112677002][accessDate: 04-11-2010]
Carcinomas, Bronchioloalveolar[accessedResource: MSH:D002282][accessDate: 04-11-2010]
BAC
[M]Bronchiolo-alveolar adenocarcinoma[accessedResource: SNOMEDCT:112677002][accessDate: 04-11-2010]
Bronchiolo-Alveolar Carcinoma of the Lung
DOID:4926
Alveolar adenocarcinoma (morphologic abnormality)
Adenocarcinomas, Alveolar[accessedResource: MSH:D002282][accessDate: 04-11-2010]
Bronchioalveolar Lung Carcinoma
Carcinomas, Bronchiolar
Bronchiolar adenocarcinoma[accessedResource: SNOMEDCT:373627005][accessDate: 04-11-2010]
Adenocarcinomas, Alveolar
Carcinomas, Bronchioloalveolar
Bronchiolo-Alveolar Lung Carcinoma[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Bronchiolo-alveolar adenocarcinoma (morphologic abnormality)
Bronchioalveolar Adenocarcinoma of Lung
Bronchiolo-Alveolar Carcinomas
A well or moderately differentiated morphologic variant of lung adenocarcinoma characterized by tumor growth along the alveolar structures without stromal, vascular, or pleural invasion.
Bronchiolo-Alveolar Carcinoma of Lung
Bronchioloalveolar carcinoma (disorder)[accessedResource: DOID:4926][accessDate: 04-11-2010]
Bronchioloalveolar Adenocarcinoma of Lung
SNOMEDCT:373627005
Bronchioloalveolar Lung Adenocarcinoma[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Alveolar cell carcinoma
Bronchiolo-Alveolar Lung Carcinoma
A carcinoma thought to be derived from epithelium of terminal bronchioles, in which the neoplastic tissue extends along the alveolar walls and grows in small masses within the alveoli. Involvement may be uniformly diffuse and massive, or nodular, or lobular. The neoplastic cells are cuboidal or columnar and form papillary structures. Mucin may be demonstrated in some of the cells and in the material in the alveoli, which also includes denuded cells. Metastases in regional lymph nodes, and in even more distant sites, are known to occur, but are infrequent. (From Stedman, 25th ed)
Carcinomas, Bronchiolar[accessedResource: MSH:D002282][accessDate: 04-11-2010]
James Malone
Adenocarcinoma, Bronchiolo Alveolar
Bronchiolo-Alveolar Carcinomas[accessedResource: MSH:D002282][accessDate: 04-11-2010]
SNOMEDCT:112677002
Bronchiolo-Alveolar Carcinoma
NCIt:C2923
Bronchioalveolar Lung Carcinoma[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Bronchioloalveolar adenocarcinoma[accessedResource: DOID:4926][accessDate: 04-11-2010]
Adenocarcinomas, Bronchiolo-Alveolar[accessedResource: MSH:D002282][accessDate: 04-11-2010]
bronchoalveolar adenocarcinoma
Bronchiolo-Alveolar Carcinoma of the Lung[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Bronchioloalveolar carcinoma
BAC[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
MSH:D002282
Bronchioloalveolar Adenocarcinoma of the Lung
Bronchiolo-Alveolar Carcinoma of Lung[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Bronchioloalveolar Lung Adenocarcinoma
Bronchiolo-alveolar adenocarcinoma (morphologic abnormality)[accessedResource: DOID:4926][accessDate: 04-11-2010]
Alveolar adenocarcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:36310008][accessDate: 04-11-2010]
Bronchiolo-Alveolar Adenocarcinomas
Adenocarcinoma, Alveolar
A well or moderately differentiated morphologic variant of lung adenocarcinoma characterized by tumor growth along the alveolar structures without stromal, vascular, or pleural invasion.[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
A carcinoma thought to be derived from epithelium of terminal bronchioles, in which the neoplastic tissue extends along the alveolar walls and grows in small masses within the alveoli. Involvement may be uniformly diffuse and massive, or nodular, or lobular. The neoplastic cells are cuboidal or columnar and form papillary structures. Mucin may be demonstrated in some of the cells and in the material in the alveoli, which also includes denuded cells. Metastases in regional lymph nodes, and in even more distant sites, are known to occur, but are infrequent. (From Stedman, 25th ed)[accessedResource: MSH:D002282][accessDate: 04-11-2010]
[M]Bronchiolo-alveolar adenocarcinoma
Alveolar Carcinomas[accessedResource: MSH:D002282][accessDate: 04-11-2010]
Bronchiolo-Alveolar Adenocarcinoma[accessedResource: MSH:D002282][accessDate: 04-11-2010]
Alveolar Adenocarcinoma[accessedResource: MSH:D002282][accessDate: 04-11-2010]
Bronchiolar Carcinoma
Alveolar Carcinoma
Bronchioalveolar Adenocarcinoma of Lung[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Bronchioloalveolar adenocarcinoma
Bronchioloalveolar Adenocarcinoma of Lung[accessedResource: NCIt:C2923][accessDate: 04-11-2010]
Carcinoma, Bronchioloalveolar[accessedResource: MSH:D002282][accessDate: 04-11-2010]
Bronchiolo-alveolar carcinoma[accessedResource: SNOMEDCT:112677002][accessDate: 04-11-2010]
Ele Holloway
James Malone
EFM19
EMF-19
James Malone
CS57520 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311941
CS57520
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311941
Tomasz Adamusiak
apical ectodermal ridge pectoral fin bud
ZFA:0000085
James Malone
293T
The EAhy 926 cell is a hybridoma line derived from human endothelium and A549/8 cells. They display stable endothelial characteristics and may provide an indication of how endothelial cells respond to photodynamic therapy.[accessedResource: BTO:0000396][accessDate: 04-11-2010]
The EAhy 926 cell is a hybridoma line derived from human endothelium and A549/8 cells. They display stable endothelial characteristics and may provide an indication of how endothelial cells respond to photodynamic therapy.
BTO:0000396
EA.hy926 cell[accessedResource: BTO:0000396][accessDate: 04-11-2010]
Tomasz Adamusiak
EA.hy926 cell
EAhy 926 cell
Ele Holloway
James Malone
PC-14
4-isothiocyanatobutyl methyl sulfoxide
sulforaphane
1-isothiocyanato-4-(methylsulfinyl)butane
A sulfoxide that has formula C6H11NOS2.
Sulforafan
InChIKey=SUVMJBTUFCVSAD-UHFFFAOYAY
CHEBI:47807
C6H11NOS2
http://www.ebi.ac.uk/efo/EFO_0001617
CS(=O)CCCCN=C=S
InChI=1/C6H11NOS2/c1-10(8)5-3-2-4-7-6-9/h2-5H2,1H3
Flora Logan
James Malone
A motility assay is an assay which measures the controlled movement of a population of cells.
motility assay
A lymph node located in the mediastinum. Mediastinal lymph nodes are arranged in three groups, one on the lateral, another on the medial, and a third on the anterior aspect of the vessels; the third group is, however, sometimes absent.[accessedResource: NCIt:C33073][accessDate: 04-11-2010]
James Malone
A lymph node located in the mediastinum. Mediastinal lymph nodes are arranged in three groups, one on the lateral, another on the medial, and a third on the anterior aspect of the vessels; the third group is, however, sometimes absent.
mediastinal lymph node
NCIt:C33073
Ele Holloway
James Malone
inferior colliculus
MA:0001067
Jie Zheng
Pancreas Excision[accessedResource: NCIt:C15294][accessDate: 04-11-2010]
NCIt:C15294
Tomasz Adamusiak
Surgical removal of part or all of the pancreas.[accessedResource: NCIt:C15294][accessDate: 04-11-2010]
Excision of the Pancreas[accessedResource: NCIt:C15294][accessDate: 04-11-2010]
pancreatectomy
Pancreas Excision
Excision of the Pancreas
Surgical removal of part or all of the pancreas.
Ele Holloway
James Malone
Tomasz Adamusiak
interleukin-4
CASRN:207137-56-2
DSSTox_CID:37158
IL-4
Ele Holloway
James Malone
SJRH30
carpel
James Malone
The female reproductive part of a flower, consisting of stigma, style, and ovary.
BTO:0000072
pistil[accessedResource: BTO:0000072][accessDate: 04-11-2010]
GRO:0005441[accessedResource: BTO:0000072][accessDate: 04-11-2010]
pistil
GRO:0005441
The female reproductive part of a flower, consisting of stigma, style, and ovary.[accessedResource: BTO:0000072][accessDate: 04-11-2010]
PO:0009030
MAT:0000516
Tomasz Adamusiak
head mesenchyme
ZFA:0000113
James Malone
The process of applying a solvent (e.g. water) or some solution (e.g. SSC/SDS) to a BioMaterial or an array to remove impurities or unwanted compounds.
washing
vulva sarcoma
http://www.ebi.ac.uk/efo/EFO_0001691
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#candela
Jie Zheng
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#candela[accessedResource: MO_572][accessDate: 04-11-2010]
James Malone
A candela is a luminous intensity unit which equal to the luminous intensity, in a given direction, of a source that emits monochromatic radiation of frequency 540 x 1012 hertz and that has a radiant intensity in that direction of 1/683 watt per steradian.
A luminous intensity unit which equal to the luminous intensity, in a given direction, of a source that emits monochromatic radiation of frequency 540 x 1012 hertz and that has a radiant intensity in that direction of 1/683 watt per steradian.
candela
cd
MO_572
true
Tomasz Adamusiak
pharyngeal pouch 2
ZFA:0001130
James Malone
CS57812 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158836&type=germplasm
CS57812
http://www.arabidopsis.org/servlets/TairObject?id=1005158836&type=germplasm
A deoxyribonucleotide polymer that is the primary genetic material of all cells. Eukaryotic and prokaryotic organisms normally contain DNA in a double-stranded state, yet several important biological processes transiently involve single-stranded regions. DNA, which consists of a polysugar-phosphate backbone possessing projections of purines (adenine and guanine) and pyrimidines (thymine and cytosine), forms a double helix that is held together by hydrogen bonds between these purines and pyrimidines (adenine to thymine and guanine to cytosine) (MSH).
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#DNA
http://www.ebi.ac.uk/efo/EFO_0001453
A deoxyribonucleotide polymer that is the primary genetic material of all cells. Eukaryotic and prokaryotic organisms normally contain DNA in a double-stranded state, yet several important biological processes transiently involve single-stranded regions. DNA, which consists of a polysugar-phosphate backbone possessing projections of purines (adenine and guanine) and pyrimidines (thymine and cytosine), forms a double helix that is held together by hydrogen bonds between these purines and pyrimidines (adenine to thymine and guanine to cytosine) (MSH).[accessedResource: NIFSTD:sao454034570][accessDate: 04-11-2010]
(Deoxyribonucleotide)n
DNAn
Jie Zheng
(Deoxyribonucleotide)n+m
NIFSTD:sao454034570
James Malone
DNA is a chemical compound which has a high molecular weight, linear polymers and is composed of nucleotides containing deoxyribose and linked by phosphodiester bonds; DNA contains the genetic information of organisms.
Deoxyribonucleic acid[accessedResource: NIFSTD:sao454034570][accessDate: 04-11-2010]
Tomasz Adamusiak
desoxyribose nucleic acid
thymus nucleic acid
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#DNA[accessedResource: MO_945][accessDate: 04-11-2010]
DNA
MO_945
DNS
Desoxyribonukleinsaeure
(Deoxyribonucleotide)m
deoxyribonucleic acid
deoxyribonucleic acids
DNAn+1
High molecular weight, linear polymers, composed of nucleotides containing deoxyribose and linked by phosphodiester bonds; DNA contain the genetic information of organisms.
HCC2157
James Malone
GeneRIF:16222316
GeneRIF:12820319
GeneRIF:12393872
SCLC[accessedResource: DOID:5409][accessDate: 04-11-2010]
Small Cell Neuroendocrine Carcinoma of the Lung
GeneRIF:14560006
GeneRIF:15864740
Small Cell Carcinoma of the Lung
GeneRIF:15806155
GeneRIF:14507113
GeneRIF:12569360
Carcinomas, Small Cell
Oat Cell Carcinoma of the Lung[accessedResource: NCIt:C4917][accessDate: 04-11-2010]
GeneRIF:16125276
MSH:D018288
DOID:5409
GeneRIF:12579323
Small Cell Carcinoma of the Lung[accessedResource: NCIt:C4917][accessDate: 04-11-2010]
GeneRIF:16052521
GeneRIF:12767512
GeneRIF:14614010
An anaplastic, highly malignant, and usually bronchogenic carcinoma composed of small ovoid cells with scanty neoplasm. It is characterized by a dominant, deeply basophilic nucleus, and absent or indistinct nucleoli. (From Stedman, 25th ed; Holland et al., Cancer Medicine, 3d ed, p1286-7)[accessedResource: MSH:D018288][accessDate: 04-11-2010]
An anaplastic, highly malignant, and usually bronchogenic carcinoma composed of small ovoid cells with scanty neoplasm. It is characterized by a dominant, deeply basophilic nucleus, and absent or indistinct nucleoli. (From Stedman, 25th ed; Holland et al., Cancer Medicine, 3d ed, p1286-7)
Carcinoma, Oat Cell
GeneRIF:12474049
Carcinoma, Small Cell[accessedResource: MSH:D018288][accessDate: 04-11-2010]
SCLC
Small Cell Carcinoma of Lung
GeneRIF:15502806
Lung Small Cell Neuroendocrine Carcinoma[accessedResource: NCIt:C4917][accessDate: 04-11-2010]
GeneRIF:14661059
Small Cell Neuroendocrine Carcinoma of the Lung[accessedResource: NCIt:C4917][accessDate: 04-11-2010]
GeneRIF:14997382
GeneRIF:14672915
small cell carcinoma of lung[accessedResource: DOID:5409][accessDate: 04-11-2010]
GeneRIF:15205342
GeneRIF:15942654
GeneRIF:12605092
Oat Cell Lung Carcinoma
GeneRIF:16103065
GeneRIF:12636057
GeneRIF:15041716
GeneRIF:11948117
GeneRIF:15205330
GeneRIF:14758730
GeneRIF:11839685
SNOMEDCT:254632001
Oat cell carcinoma of lung (disorder)[accessedResource: DOID:5409][accessDate: 04-11-2010]
GeneRIF:15514966
SNOMEDCT:254633006
GeneRIF:12684632
GeneRIF:11782387
GeneRIF:11804687
GeneRIF:15184245
GeneRIF:12629521
GeneRIF:12611639
A highly aggressive subtype of lung carcinoma characterized by the presence of malignant small cells and necrosis. Metastatic disease is usually present at the time of diagnosis.
GeneRIF:16226111
small cell carcinoma of lung (disorder)[accessedResource: DOID:5409][accessDate: 04-11-2010]
small cell neuroendocrine carcinoma of lung[accessedResource: DOID:5409][accessDate: 04-11-2010]
GeneRIF:15870700
GeneRIF:12792791
GeneRIF:12757855
GeneRIF:14592434
SCLC - Small cell lung cancer
GeneRIF:16077988
Carcinoma, Small Cell
GeneRIF:12796027
GeneRIF:15217946
Oat cell carcinoma of lung (disorder)
GeneRIF:15709164
GeneRIF:15112277
GeneRIF:16140931
GeneRIF:16115696
GeneRIF:11955647
GeneRIF:15387368
GeneRIF:12432558
small cell lung carcinoma
Oat Cell Lung Carcinoma[accessedResource: NCIt:C4917][accessDate: 04-11-2010]
SCLC - Small cell lung cancer[accessedResource: SNOMEDCT:254632001][accessDate: 04-11-2010]
Carcinomas, Oat Cell[accessedResource: MSH:D018288][accessDate: 04-11-2010]
A highly aggressive subtype of lung carcinoma characterized by the presence of malignant small cells and necrosis. Metastatic disease is usually present at the time of diagnosis. (NCI05)
GeneRIF:12499091
GeneRIF:15026553
Carcinomas, Oat Cell
GeneRIF:12079519
GeneRIF:12356726
Oat cell carcinoma of lung
GeneRIF:12001123
GeneRIF:12177731
Carcinoma, Oat Cell[accessedResource: MSH:D018288][accessDate: 04-11-2010]
NCIt:C4917
GeneRIF:11836568
GeneRIF:12555074
GeneRIF:16242000
GeneRIF:15623596
GeneRIF:14515059
Oat Cell Carcinoma of the Lung
GeneRIF:15671551
Oat cell carcinoma of lung[accessedResource: SNOMEDCT:254633006][accessDate: 04-11-2010]
A highly aggressive subtype of lung carcinoma characterized by the presence of malignant small cells and necrosis. Metastatic disease is usually present at the time of diagnosis.[accessedResource: NCIt:C4917][accessDate: 04-11-2010]
Small Cell Neuroendocrine Carcinoma of Lung
Small cell lung cancer[accessedResource: SNOMEDCT:254632001][accessDate: 04-11-2010]
Carcinomas, Small Cell[accessedResource: MSH:D018288][accessDate: 04-11-2010]
James Malone
GeneRIF:12820318
small cell carcinoma of lung (disorder)
GeneRIF:15279903
GeneRIF:12771999
GeneRIF:12700635
GeneRIF:12591723
Small cell lung cancer
Lung Small Cell Neuroendocrine Carcinoma
James Malone
BG02
BG02ES
BG02ES is a cell line dervied from human embryonic stem cells.
NIFSTD:birnlex_174
http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
129S6/SvEvTac[accessedResource: NIFSTD:birnlex_174][accessDate: 04-11-2010]
129S6/SvEvTac
129S6 is a substrain of the mouse strain 129 as described in Jackson Laboratory http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
Tomasz Adamusiak
James Malone
129S6
Tomasz Adamusiak
axial chorda mesoderm
ZFA:0000091
FMAID:5034
James Malone
EHDAA:8677
MA:0000139
Lymph node[accessedResource: FMAID:5034][accessDate: 04-11-2010]
lymphatic system
Lymph node
EMAPA:18248
SAEL:63
Tomasz Adamusiak
descending octaval nucleus
ZFA:0000645
AAO:0000250
FMAID:7203
EMAPA:17373
metanephros
1: One of a pair of vertebrate organs situated in the body cavity near the spinal column that excrete waste products of metabolism, in humans are bean-shaped organs about 4 1/2 inches (11 1/2 centimeters) long lying behind the peritoneum in a mass of fatty tissue, and consist chiefly of nephrons by which urine is secreted, collected, and discharged into a main cavity whence it is conveyed by the ureter to the bladder.n2: Any of various excretory organs of invertebrate animals.[accessedResource: BTO:0000671][accessDate: 04-11-2010]
EV:0100096
SAEL:57
MAT:0000119
James Malone
WBbt:0005775
excretory canal
kidney
1: One of a pair of vertebrate organs situated in the body cavity near the spinal column that excrete waste products of metabolism, in humans are bean-shaped organs about 4 1/2 inches (11 1/2 centimeters) long lying behind the peritoneum in a mass of fatty tissue, and consist chiefly of nephrons by which urine is secreted, collected, and discharged into a main cavity whence it is conveyed by the ureter to the bladder.n2: Any of various excretory organs of invertebrate animals.
excretory canal[accessedResource: MAT:0000119][accessDate: 04-11-2010]
MA:0000368
metanephros[accessedResource: MAT:0000119][accessDate: 04-11-2010]
BTO:0000671
EHDAA:5911
James Malone
NCI-H157
H157
hemocyte
Tomasz Adamusiak
A blood cell especially of an invertebrate animal.[accessedResource: BTO:0000571][accessDate: 04-11-2010]
haemocyte
haemocyte[accessedResource: BTO:0000571][accessDate: 04-11-2010]
hemocyte (sensu Nematoda and Protostomia)[accessedResource: CL:0000387][accessDate: 04-11-2010]
BTO:0000571
hemocyte (sensu Nematoda and Protostomia)
A blood cell especially of an invertebrate animal.
CL:0000387
James Malone
true
1.8
Duplicate use EFO_0000099
obsolete_BY4741
James Malone
Microscopic morphology of tissues.
morphology
histology
fibroblast derived cell line
Kaposi Sarcoma Herpes Virus
KSHV[accessedResource: NCIt:C14327][accessDate: 04-11-2010]
HHV8[accessedResource: NCIt:C14327][accessDate: 04-11-2010]
human herpesvirus 8
A gammaherpesvirus that contributes to the development of Kaposi sarcoma.
Kaposi Sarcoma-Associated Herpes Virus[accessedResource: NCIt:C14327][accessDate: 04-11-2010]
A gammaherpesvirus that contributes to the development of Kaposi sarcoma.[accessedResource: NCIt:C14327][accessDate: 04-11-2010]
KSHV
Kaposi Sarcoma-Associated Herpes Virus
HHV8
HHV-8[accessedResource: NCIt:C14327][accessDate: 04-11-2010]
Ele Holloway
HHV-8
Virus-HHV8
Tomasz Adamusiak
NCIt:C14327
Virus-HHV8[accessedResource: NCIt:C14327][accessDate: 04-11-2010]
Kaposi Sarcoma Herpes Virus[accessedResource: NCIt:C14327][accessDate: 04-11-2010]
Natural Language Generator 8th April 2010
A 1205 lu is a cell line.
A 1205 lu is both something that is bearer of a melanoma, and something that derives from a homo sapiens.
1205-Lu
Ele Holloway
James Malone
A sporozoan cell that reproduces by schizogony, producing a varied number of daughter trophozoites or merozoites.
erythrocytic schizont stage
The stage of a sporozoan cell that reproduces by schizogony, producing a varied number of daughter trophozoites or merozoites.[accessedResource: IDOMAL:0000306][accessDate: 04-11-2010]
The stage of a sporozoan cell that reproduces by schizogony, producing a varied number of daughter trophozoites or merozoites.
erythrocytic schizont stage[accessedResource: IDOMAL:0000306][accessDate: 04-11-2010]
Tomasz Adamusiak
Jie Zheng
IDOMAL:0000306
erythrocytic schizont
Tomasz Adamusiak
tangential nucleus
ZFA:0000693
James Malone
Ele Holloway
CASRN:23246-96-0
DSSTox_Generic_SID:C18H23NO6
riddelliine
STRUCTURE_Formula:(15Z)-12,18-dihydroxy-13,19-didehydrosenecionan-11,16-dione
DSSTox_CID:26006
Tomasz Adamusiak
James Malone
true
A femtometer is a length unit which is equal to 1m x 10^-15.
femtometer
PERSON: James Malone
femtometre
fm
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#DNA_sequencer[accessedResource: MO_676][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0002015
A DNA sequencer is an instrument that determines the order of deoxynucleotides in deoxyribonucleic acid sequences.
DNA sequencer
James Malone
MO_676
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#DNA_sequencer
Vitamin B12 Deficiencies
Cobalamin deficiency (disorder)
Cobalamin deficiency[accessedResource: SNOMEDCT:190634004][accessDate: 04-11-2010]
MSH:D014806
Cobalamin deficiency (disorder)[accessedResource: DOID:8459][accessDate: 04-11-2010]
Cobalamin deficiency
Deficiency of vitamin B<sub>12</sub>[accessedResource: SNOMEDCT:190634004][accessDate: 04-11-2010]
Deficiency of vitamin B>12<
SNOMEDCT:190634004
VITAMIN B12 DEFIC
Deficiency of vitamin B<sub>12</sub>
VITAMIN B 12 DEFIC[accessedResource: MSH:D014806][accessDate: 04-11-2010]
Deficiencies, Vitamin B12[accessedResource: MSH:D014806][accessDate: 04-11-2010]
Deficiency of vitamin B12[accessedResource: SNOMEDCT:190634004][accessDate: 04-11-2010]
Deficiency of vitamin B12
DEFIC VITAMIN B 12
Deficiency, Vitamin B 12[accessedResource: MSH:D014806][accessDate: 04-11-2010]
Deficiency of vitamin B>12<[accessedResource: SNOMEDCT:190634004][accessDate: 04-11-2010]
Vitamin B 12 Deficiency
James Malone
vitamin B12 deficiency
A nutritional condition produced by a deficiency of VITAMIN B 12 in the diet, characterized by megaloblastic anemia. Since vitamin B 12 is not present in plants, humans have obtained their supply from animal products, from multivitamin supplements in the form of pills, and as additives to food preparations. A wide variety of neuropsychiatric abnormalities is also seen in vitamin B 12 deficiency and appears to be due to an undefined defect involving myelin synthesis. (From Cecil Textbook of Medicine, 19th ed, p848)
A nutritional condition produced by a deficiency of VITAMIN B 12 in the diet, characterized by megaloblastic anemia. Since vitamin B 12 is not present in plants, humans have obtained their supply from animal products, from multivitamin supplements in the form of pills, and as additives to food preparations. A wide variety of neuropsychiatric abnormalities is also seen in vitamin B 12 deficiency and appears to be due to an undefined defect involving myelin synthesis. (From Cecil Textbook of Medicine, 19th ed, p848)[accessedResource: MSH:D014806][accessDate: 04-11-2010]
deficiency of vitamin B>12< (disorder)[accessedResource: DOID:8459][accessDate: 04-11-2010]
DOID:8459
VITAMIN B A 12 DEFICIENCY
Deficiency of vitamin B>12< (disorder)
VITAMIN B A 12 DEFICIENCY[accessedResource: MSH:D014806][accessDate: 04-11-2010]
VITAMIN B12 DEFIC[accessedResource: MSH:D014806][accessDate: 04-11-2010]
A capillary tube; especially: any of the smallest blood vessels connecting arterioles with venules and forming networks throughout the body.[accessedResource: BTO:0002045][accessDate: 04-11-2010]
A capillary tube; especially: any of the smallest blood vessels connecting arterioles with venules and forming networks throughout the body.
capillary
Tiny blood vessels that connect the arterioles with the venules.
James Malone
Tiny blood vessels that connect the arterioles with the venules.[accessedResource: NCIt:C12685][accessDate: 04-11-2010]
NCIt:C12685
BTO:0002045
NCIt:C12469
James Malone
Pleural Tissue
The tissue that lines the wall of the thoracic cavity and the surface of the lungs.
The tissue that lines the wall of the thoracic cavity and the surface of the lungs.[accessedResource: NCIt:C12469][accessDate: 04-11-2010]
Pleural Tissue[accessedResource: NCIt:C12469][accessDate: 04-11-2010]
The delicate serous membrane that lines each half of the thorax of mammals and is folded back over the surface of the lung of the same side.[accessedResource: BTO:0001791][accessDate: 04-11-2010]
pleura
BTO:0001791
The delicate serous membrane that lines each half of the thorax of mammals and is folded back over the surface of the lung of the same side.
DSSTox_CID:3181
DSSTox_Generic_SID:40235
STRUCTURE_Formula:C48H74O14
Tomasz Adamusiak
ivermectin
STRUCTURE_ChemicalName_IUPAC:(2aE,4E,5'S,6S,6'R,7S,8E,11R,13R,15S,17aR,20R,20aR,20bS)-20,20b-dihydroxy-5',6,8,19-tetramethyl-6'-[(1S)-1-methylpropyl]-17-oxo-3',4',5',6,6',10,11,14,15,17,17a,20,20a,20b-tetradecahydro-2H,7H-spiro[11,15-methanofuro[4,3,2-pq][2,6]benzodioxacyclooctadecine-13,2'-pyran]-7-yl 2,6-dideoxy-4-O-(2,6-dideoxy-3-O-methyl-alpha-L-arabino-hexopyranosyl)-3-O-methyl-alpha-L-arabino-hexopyranoside
CASRN:70288-86-7
James Malone
Ele Holloway
2102ep is an embryonal cell line
2102Ep
agarose
9012-36-6
James Malone
right arm
Right is a geometric modifier describing something which is to the right of the median of an organism or organism part, for example right arm.
right
MAT:0000492
Tomasz Adamusiak
embryonic proventriculus outer layer
FBbt:00005610
pollen[accessedResource: CL:0000252][accessDate: 04-11-2010]
PO:0020048
BTO:0000124
microspore
James Malone
pollen
Haploid cells produced by meiosis in the anthers of angiosperms; four microspores are produced from a single microsporocyte.[accessedResource: BTO:0000124][accessDate: 04-11-2010]
A haploid (1n) spore developing into a male gametophyte in heterosporous plants; the uninucleate pollen grain in seed plants.
CL:0000252
Haploid cells produced by meiosis in the anthers of angiosperms; four microspores are produced from a single microsporocyte.
A haploid (1n) spore developing into a male gametophyte in heterosporous plants; the uninucleate pollen grain in seed plants.[accessedResource: CL:0000252][accessDate: 04-11-2010]
MAT:0000215
Tomasz Adamusiak
James Malone
CS57563 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311984
CS57563
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311984
Tomasz Adamusiak
otic lateral line neuromast
ZFA:0000136
obsolete platform because the distinction between instrument and platform is very fuzzy
true
The specific version (such as manufacturer, model, etc.) of a technology that is used to carry out a laboratory or computational experiment.
obsolete_platform
A terminally differentiated cell of the B lymphocyte lineage that produces antibodies; plasma cells are oval or round with extensive rough endoplasmic reticulum, a well-developed Golgi apparatus, and a round nucleus having a characteristic cartwheel heterochromatin pattern.[accessedResource: BTO:0000392][accessDate: 04-11-2010]
A terminally differentiated cell of the B lymphocyte lineage that produces antibodies; plasma cells are oval or round with extensive rough endoplasmic reticulum, a well-developed Golgi apparatus, and a round nucleus having a characteristic cartwheel heterochromatin pattern.
plasma cell
CL:0000786
plasmacyte[accessedResource: BTO:0000392][accessDate: 04-11-2010]
plasmocyte[accessedResource: BTO:0000392][accessDate: 04-11-2010]
plasmocyte
A terminally differentiated, post-mitotic, antibody secreting cell of the B cell lineage with the phenotype CD138-positive, surface immunonoglobulin-negative, and MHC Class II-negative. Plasma cells are oval or round with extensive rough endoplasmic reticulum, a well-developed Golgi apparatus, and a round nucleus having a characteristic cartwheel heterochromatin pattern and are devoted to producing large amounts of immunoglobulin.
BTO:0000392
James Malone
A terminally differentiated, post-mitotic, antibody secreting cell of the B cell lineage with the phenotype CD138-positive, surface immunonoglobulin-negative, and MHC Class II-negative. Plasma cells are oval or round with extensive rough endoplasmic reticulum, a well-developed Golgi apparatus, and a round nucleus having a characteristic cartwheel heterochromatin pattern and are devoted to producing large amounts of immunoglobulin.[accessedResource: CL:0000786][accessDate: 04-11-2010]
plasmacyte
Ele Holloway
James Malone
SHP77
1: The part of the body between the thorax and the pelvis; also: the cavity of this part of the trunk containing the chief viscera.n2: The posterior section of the body behind the thorax in an arthropod.
adult abdomen[accessedResource: TGMA:0000524][accessDate: 04-11-2010]
James Malone
FMAID:9577
abdomen
Subdivision of trunk proper, which is demarcated from the thorax internally by the inferior surface of the sternocostal part of the diaphragm and externally by the costal margin, from the back of abdomen by the external surface of the posterior abdominal wall, from the perineum by the superior surface of the urogenital diaphragm and from the lower limbs by the inguinal folds; together with the thorax, and perineum, it constitutes the trunk proper. Examples: There is only one abdomen.
TGMA:0000524
MAT:0000298
EV:0100011
Abdominopelvis
abdominal cavity[accessedResource: BTO:0000020][accessDate: 04-11-2010]
SAEL:1
FBbt:00000020
1: The part of the body between the thorax and the pelvis; also: the cavity of this part of the trunk containing the chief viscera.n2: The posterior section of the body behind the thorax in an arthropod.[accessedResource: BTO:0000020][accessDate: 04-11-2010]
abdominal cavity
adult abdomen
The most posterior of the three tagma (FBbt:00000002).
The third large region of the insect body, which originally comprised twelve segments, each segment is usually formed by a dorsal tergite and a ventral sternite and carries on both sides a spiracle, sometimes, both the dorsal and the ventral plates are further subdivided to give rise to latero-tergites and latero-sternites. In the context of Drosophila refers to the most posterior of the three main tagmata or divisions of the body plan, after the head and the thorax.
The third, posterior division (tagma) of the insect body. In adult mosquitoes, consisting of ten apparent segments.[accessedResource: TGMA:0000524][accessDate: 04-11-2010]
The third, posterior division (tagma) of the insect body. In adult mosquitoes, consisting of ten apparent segments.
Abdominopelvic region
The most posterior of the three tagma (FBbt:00000002).[accessedResource: FBbt:00000020][accessDate: 04-11-2010]
BTO:0000020
STRUCTURE_ChemicalName_IUPAC:iron(3+) 2-hydroxypropane-1,2,3-tricarboxylate ammoniate
CASRN:1185-57-5
FAC
STRUCTURE_Formula:C6H8FeNO7
James Malone
Ele Holloway
DSSTox_CID:20477
DSSTox_Generic_SID:40477
ferric ammonium citrate
Tomasz Adamusiak
STRUCTURE_Formula:C25H37NO4
STRUCTURE_ChemicalName_IUPAC:2-(hydroxymethyl)-4-[1-hydroxy-2-({6-[(4-phenylbutyl)oxy]hexyl}amino)ethyl]phenol
CASRN:89365-50-4
DSSTox_CID:3571
salmeterol
James Malone
DSSTox_Generic_SID:23571
Ele Holloway
Tomasz Adamusiak
atopy
1: A slender threadlike outgrowth of the epidermis of an animal; especially: one of the usually pigmented filaments that form the characteristic coat of a mammal.n2: The hairy covering of an animal or a body part; especially: the coating of hairs on a human head.[accessedResource: BTO:0001501][accessDate: 04-11-2010]
BTO:0001501
MAT:0000160
EV:0100157
EMAPA:17529
EMAPA:18769
vibrissa
vibrissa[accessedResource: MAT:0000160][accessDate: 04-11-2010]
James Malone
hair
FMAID:53667
MA:0000155
1: A slender threadlike outgrowth of the epidermis of an animal; especially: one of the usually pigmented filaments that form the characteristic coat of a mammal.n2: The hairy covering of an animal or a body part; especially: the coating of hairs on a human head.
Ele Holloway
Eastern Indian
James Malone
segmentation 10-13 somites
ZFS:0000025
InChIKey=OHCQJHSOBUTRHG-KGGHGJDLBB
colforsine
[H][C@@]12[C@H](O)[C@H](OC(C)=O)[C@@]3(C)O[C@](C)(CC(=O)[C@]3(O)[C@@]1(C)[C@@H](O)CCC2(C)C)C=C
colforsin
C22H34O7
colforsinum
CHEBI:42471
http://www.ebi.ac.uk/efo/EFO_0001539
7beta-acetoxy-8,13-epoxy-1alpha,6beta,9alpha-trihydroxylabd-14-en-11-one
colforsina
forskolin
A labdane diterpenoid that has formula C22H34O7.
(3R,4aR,5S,6S,6aS,10S,10aR,10bS)-3-ethenyl-6,10,10b-trihydroxy-3,4a,7,7,10a-pentamethyl-1-oxododecahydro-1H-benzo[f]chromen-5-yl acetate
InChI=1/C22H34O7/c1-8-19(5)11-14(25)22(27)20(6)13(24)9-10-18(3,4)16(20)15(26)17(28-12(2)23)21(22,7)29-19/h8,13,15-17,24,26-27H,1,9-11H2,2-7H3/t13-,15-,16-,17-,19-,20-,21+,22-/m0/s1
Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[accessedResource: TAO:0000367][accessDate: 04-11-2010]
MA:0000319
BTO:0001686
FMAID:7490
FBbt:00004645
articular joint[accessedResource: BTO:0001686][accessDate: 04-11-2010]
EV:0100142
set of all joints
Anatomical junction which consists of parts of two or more adjacent bones or cartilages which are interconnected by organs and/or organ parts that consist of various types of connective tissue. Together with other joints and bones, a joint constitutes the skeletal system. Examples: pubic symphysis, knee joint, temporomandibular joint.
Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.
MAT:0000188
TAO:0000367
The point of contact between elements of an animal skeleton with the parts that surround and support it.
James Malone
joint
XAO:0000171
The point of contact between elements of an animal skeleton with the parts that surround and support it.[accessedResource: BTO:0001686][accessDate: 04-11-2010]
articular joint
Set of all joints[accessedResource: FMAID:228659][accessDate: 04-11-2010]
FMAID:228659
Posterior segment of circumflex branch of left coronary artery[accessedResource: FMAID:3906][accessDate: 04-11-2010]
Second segment of circumflex branch of left coronary artery[accessedResource: FMAID:3906][accessDate: 04-11-2010]
Second segment of circumflex branch of left coronary artery
Tomasz Adamusiak
Jie Zheng
Posterior segment of circumflex branch of left coronary artery
FMAID:3906
distal portion of circumflex branch of left coronary artery
An assay where chromatin immunoprecipitation (ChIP) is used in combination with SNP microarray technology
ChIP-chip by SNP array
Ele Holloway
James Malone
osteoarthritis
EV:0400132
HP:0002758
James Malone
Activity that requires physical or mental exertion, especially when performed to develop or maintain fitness.
exercise
corneal fibroblast[accessedResource: CL:0002363][accessDate: 04-11-2010]
A keratocyte is a specialized fibroblast residing in the stroma that has a flattened, dendritic cell located between the lamellae with a large flattened nucleus and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratin sulfate.
corneal keratocyte
corneal keratocyte[accessedResource: CL:0002363][accessDate: 04-11-2010]
Tomasz Adamusiak
corneal fibroblast
Ele Holloway
A keratocyte is a specialized fibroblast residing in the stroma that has a flattened, dendritic cell located between the lamellae with a large flattened nucleus and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratin sulfate.[accessedResource: CL:0002363][accessDate: 04-11-2010]
James Malone
keratocyte
CL:0002363
Ele Holloway
James Malone
Tomasz Adamusiak
hepatocyte growth factor
CASRN:67256-21-7
DSSTox_Generic_SID:40491
HGF
Encephalomyelitis, Allergic[accessedResource: MSH:D004681][accessDate: 04-11-2010]
GeneRIF:14688366
GeneRIF:14662901
GeneRIF:11908941
GeneRIF:16172262
GeneRIF:16177127
GeneRIF:15710471
GeneRIF:15778405
GeneRIF:16172261
GeneRIF:12791309
GeneRIF:15100315
GeneRIF:12538686
GeneRIF:11847479
GeneRIF:12196270
GeneRIF:12799016
ALLERGIC ENCEPH
GeneRIF:12387457
GeneRIF:15081250
Experimental Allergic Encephalomyelitides
GeneRIF:12613667
Experimental Allergic Encephalomyelitis
An experimental animal model for central nervous system demyelinating disease. Inoculation with a white matter emulsion combined with FREUND'S ADJUVANT, myelin basic protein, or purified central myelin triggers a T cell-mediated immune response directed towards central myelin. The pathologic features are similar to MULTIPLE SCLEROSIS, including perivascular and periventricular foci of inflammation and demyelination. Subpial demyelination underlying meningeal infiltrations also occurs, which is also a feature of ENCEPHALOMYELITIS, ACUTE DISSEMINATED. Passive immunization with T-cells from an afflicted animal to a normal animal also induces this condition. (From Immunol Res 1998;17(1-2):217-27; Raine CS, Textbook of Neuropathology, 2nd ed, p604-5)[accessedResource: MSH:D004681][accessDate: 04-11-2010]
An experimental animal model for central nervous system demyelinating disease. Inoculation with a white matter emulsion combined with FREUND'S ADJUVANT, myelin basic protein, or purified central myelin triggers a T cell-mediated immune response directed towards central myelin. The pathologic features are similar to MULTIPLE SCLEROSIS, including perivascular and periventricular foci of inflammation and demyelination. Subpial demyelination underlying meningeal infiltrations also occurs, which is also a feature of ENCEPHALOMYELITIS, ACUTE DISSEMINATED. Passive immunization with T-cells from an afflicted animal to a normal animal also induces this condition. (From Immunol Res 1998;17(1-2):217-27; Raine CS, Textbook of Neuropathology, 2nd ed, p604-5)
GeneRIF:14644025
GeneRIF:11932923
GeneRIF:14507666
GeneRIF:12819359
GeneRIF:15835266
EXPER AUTOIMMUNE ENCEPH[accessedResource: MSH:D004681][accessDate: 04-11-2010]
James Malone
experimental autoimmune encephalomyelitis
ENCEPH ALLERGIC[accessedResource: MSH:D004681][accessDate: 04-11-2010]
Experimental Allergic Encephalomyelitides[accessedResource: MSH:D004681][accessDate: 04-11-2010]
GeneRIF:12429207
GeneRIF:14988414
GeneRIF:12372981
GeneRIF:15843584
GeneRIF:16272284
GeneRIF:12146799
GeneRIF:15522913
ALLERGIC ENCEPH EXPER
GeneRIF:15926914
GeneRIF:15383607
GeneRIF:12960295
GeneRIF:12207354
GeneRIF:12115610
GeneRIF:15920728
GeneRIF:15728477
EXPER AUTOIMMUNE ENCEPH
EAE
GeneRIF:15383583
GeneRIF:12626533
GeneRIF:16081797
GeneRIF:15837577
GeneRIF:15390104
GeneRIF:15265890
GeneRIF:15925413
GeneRIF:15328042
MSH:D004681
SNOMEDCT:27040004
GeneRIF:16005524
GeneRIF:14975582
GeneRIF:14634082
GeneRIF:12471147
GeneRIF:14766173
GeneRIF:15843539
GeneRIF:16002731
GeneRIF:14991835
Experimental allergic encephalomyelitis (disorder)
DOID:3046
GeneRIF:11477542
Allergic encephalomyelitis
GeneRIF:12097407
GeneRIF:11859094
Allergic encephalomyelitis (disorder)[accessedResource: DOID:3046][accessDate: 04-11-2010]
GeneRIF:15050683
SNOMEDCT:50776006
GeneRIF:14662853
GeneRIF:15778395
GeneRIF:15494405
Allergic encephalomyelitis (disorder)
EXPER ALLERGIC ENCEPH[accessedResource: MSH:D004681][accessDate: 04-11-2010]
GeneRIF:14999816
GeneRIF:12925695
GeneRIF:11985514
GeneRIF:12486171
EAE[accessedResource: DOID:3046][accessDate: 04-11-2010]
GeneRIF:12594253
GeneRIF:12817031
GeneRIF:15850576
GeneRIF:11721059
GeneRIF:15501390
GeneRIF:16049338
Experimental allergic encephalomyelitis (disorder)[accessedResource: SNOMEDCT:27040004][accessDate: 04-11-2010]
GeneRIF:15929040
Encephalomyelitis, Experimental Allergic[accessedResource: MSH:D004681][accessDate: 04-11-2010]
GeneRIF:12147621
GeneRIF:11908949
GeneRIF:15878627
Tomasz Adamusiak
true
1.8
duplication with EFO_0001756
obsolete_disease state design
MO_902
Anna Farne
CLIP-Seq also called RIP-Seq or HITS-CLIP is a method used for finding which RNA species interact with a particular RNA-binding protein (or an RNA). It employs crosslinking between RNA and the protein, followed by immunoprecipitation with antibodies for the protein.
CLIP-Seq
MO_144
NIFSTD:sao279801585
Tomasz Adamusiak
true
James Malone
Jie Zheng
measurement
A measurement is an information entity that is a recording of the output of a measurement such as produced by an instrument.
fasting
NCIt:C63663
Fast
Tomasz Adamusiak
Fast[accessedResource: NCIt:C63663][accessDate: 04-11-2010]
Abstaining from food.
Abstaining from food.[accessedResource: NCIt:C63663][accessDate: 04-11-2010]
Jie Zheng
Ele Holloway
James Malone
TC71
TGMA:0000540
WBbt:0006929
seta
seta[accessedResource: MAT:0000163][accessDate: 04-11-2010]
James Malone
TADS:0000301
BTO:0001237
Defined by Snodgrass as "a simple sense organ, or one of the structural units of a compound sense organ," and by Schneider as "a specialized area of the integument, consisting of formative cells, the sensory nerve cells, and, in some cases, auxiliary cells".[accessedResource: TGMA:0000540][accessDate: 04-11-2010]
and by Schneider as
TADS:0000089
A simple epithelial sense organ of an invertebrate (as an insect) usually in the form of a spine, plate, rod, cone, or peg that is composed of one or a few cells with a nerve connection.[accessedResource: BTO:0001237][accessDate: 04-11-2010]
sensillum
MAT:0000163
A simple epithelial sense organ of an invertebrate (as an insect) usually in the form of a spine, plate, rod, cone, or peg that is composed of one or a few cells with a nerve connection.
Defined by Snodgrass as "a simple sense organ, or one of the structural units of a compound sense organ," and by Schneider as "a specialized area of the integument, consisting of formative cells, the sensory nerve cells, and, in some cases, auxiliary cells".
James Malone
GM06993
Jie Zheng
Tomasz Adamusiak
mouse prenatal
NIFSTD:birnlex_484
birnlex_484
http://www.ebi.ac.uk/efo/EFO_0001567
chlorure de lithium
lithium chloride
A metal chloride salt with a Li(+) counterion.
A lithium salt that has formula ClLi.
CHEBI:48607
lithii chloridum
LiCl
ClLi
cloruro de litio
InChI=1/ClH.Li/h1H;/q;+1/p-1/fCl.Li/h1h;/q-1;m
InChIKey=KWGKDLIKAYFUFQ-HPRMROJMCO
Lithiumchlorid
Cc1cccc(Nc2cc(Cl)nc(SCC(O)=O)n2)c1C
InChIKey=SZRPDCCEHVWOJX-YSFRZULJCA
((4-Chloro-6-((2,3-dimethylphenyl)amino)-2-pyrimidinyl)thio)acetic acid
C14H14ClN3O2S
WY-14,643
pirinixic acid
({4-chloro-6-[(2,3-dimethylphenyl)amino]pyrimidin-2-yl}sulfanyl)acetic acid
InChI=1/C14H14ClN3O2S/c1-8-4-3-5-10(9(8)2)16-12-6-11(15)17-14(18-12)21-7-13(19)20/h3-6H,7H2,1-2H3,(H,19,20)(H,16,17,18)/f/h16,19H
(4-Chloro-6-(2,3-xylidino)-2-pyrimidinylthio)acetic acid
An aryl sulfide that has formula C14H14ClN3O2S.
CHEBI:32509
http://www.ebi.ac.uk/efo/EFO_0001593
Tomasz Adamusiak
caudal tuberal nucleus
ZFA:0000482
Tomasz Adamusiak
peripheral neuropathy
James Malone
true
temp holding class to be placed as hierarchy is restructured
1.8
temporary place holder class, no longer needed
obsolete_temp bin organism part
James Malone
CS57701 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158725&type=germplasm
CS57701
http://www.arabidopsis.org/servlets/TairObject?id=1005158725&type=germplasm
oestrogenes
estrogen
estrogeno
Tomasz Adamusiak
oestrogene
Oestrogen
estrogenes Hormon
oestrogens
estrogene
http://www.ebi.ac.uk/efo/EFO_0001530
estrogens
NIFSTD:nifext_5156
A steroid hormone that stimulates or controls the development and maintenance of female sex characteristics in mammals by binding to oestrogen receptors. The oestrogens are named for their importance in the oestrous cycle.
James Malone
estrogenos
estrogenes
Tomasz Adamusiak
Malpighian tubule primordium
FBbt:00000442
James Malone
GM11829
James Malone
HCT-8
HCT8
Ele Holloway
Postpharynx
TGMA:0000132
adult pharynx[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
Pumporgan
pumping organ
WBbt:0003681
oesophagus
Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills. Kimmel et al, 1995.[accessedResource: TAO:0000056][accessDate: 04-11-2010]
pharynx structure
The part of the vertebrate alimentary canal between the cavity of the mouth and the esophagus.nThe pharynx of Nematodes is an efficient pump and forces food into the intestines.[accessedResource: BTO:0001049][accessDate: 04-11-2010]
oesophagus[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
SAEL:82
anterior pharynx[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
Praepharynx
pump[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
posterior pharynx
pharyngeal valve
EV:0100065
antlia[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
pumping organ[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
muscular dilation of the oesophagus
post-pharynx[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
FMAID:46688
The part of the stomodeum between the mouth and the oesophagus.
EMAPA:16706
TAO:0000056
MA:0000432
pharyngeal valve[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
Pharynx[accessedResource: FMAID:46688][accessDate: 04-11-2010]
antlia
anterior pharynx
Pharynx
TADS:0000042
Praepharynx[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
Postpharynx[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
FBbt:00005380
The part of the stomodeum between the mouth and the oesophagus.[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
Pumporgan[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
James Malone
post-pharynx
pump
muscular dilation of the oesophagus[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
BTO:0001049
Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills. Kimmel et al, 1995.
EHDAA:2947
MAT:0000049
posterior pharynx[accessedResource: TGMA:0000132][accessDate: 04-11-2010]
adult pharynx
The part of the vertebrate alimentary canal between the cavity of the mouth and the esophagus.nThe pharynx of Nematodes is an efficient pump and forces food into the intestines.
MFO:0003080
http://www.ebi.ac.uk/efo/EFO_0002421
leurocristine
22-Oxovincaleukoblastine
Ele Holloway
A vinca alkaloid that has formula C46H56N4O10.
CHEBI:28445
vincristine
C46H56N4O10
InChIKey=OGWKCGZFUXNPDA-XQKSVPLYBW
James Malone
[H][C@@]12N3CC[C@@]11c4cc(c(OC)cc4N(C=O)[C@@]1([H])[C@](O)([C@H](OC(C)=O)[C@]2(CC)C=CC3)C(=O)OC)[C@]1(C[C@@H]2C[N@](CCc3c1[nH]c1ccccc31)C[C@](O)(CC)C2)C(=O)OC
InChI=1/C46H56N4O10/c1-7-42(55)22-28-23-45(40(53)58-5,36-30(14-18-48(24-28)25-42)29-12-9-10-13-33(29)47-36)32-20-31-34(21-35(32)57-4)50(26-51)38-44(31)16-19-49-17-11-15-43(8-2,37(44)49)39(60-27(3)52)46(38,56)41(54)59-6/h9-13,15,20-21,26,28,37-39,47,55-56H,7-8,14,16-19,22-25H2,1-6H3/t28-,37+,38-,39-,42+,43-,44-,45+,46+/m1/s1
DOID:2681
Mole NOS
nevus (disorder)[accessedResource: DOID:2681][accessDate: 04-11-2010]
Mole NOS[accessedResource: DOID:2681][accessDate: 04-11-2010]
Mole of skin[accessedResource: DOID:2681][accessDate: 04-11-2010]
skin mole, NOS
skin mole, NOS[accessedResource: DOID:2681][accessDate: 04-11-2010]
nevus (disorder)
nevus
nevus, NOS
nevus, NOS[accessedResource: DOID:2681][accessDate: 04-11-2010]
Tomasz Adamusiak
James Malone
Mole of skin
James Malone
CS57629 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158653&type=germplasm
CS57629
http://www.arabidopsis.org/servlets/TairObject?id=1005158653&type=germplasm
Ele Holloway
James Malone
NALM1
Jie Zheng
Tomasz Adamusiak
The rapidly proliferating mass of cells at the caudal extremity of the embryo; remnant of the primitive node.[accessedResource: BTO:0001445][accessDate: 04-11-2010]
end bud
tail bud
tailbud
The rapidly proliferating mass of cells at the caudal extremity of the embryo; remnant of the primitive node.
end bud[accessedResource: BTO:0001445][accessDate: 04-11-2010]
BTO:0001445
tailbud[accessedResource: BTO:0001445][accessDate: 04-11-2010]
James Malone
R28
Natural Language Generator 8th April 2010
ARH77
An arh77 is a cell line.
An arh77 is both something that is bearer of a plasma cell neoplasm, and something that derives from a lymphatic system.
Ele Holloway
James Malone
James Malone
HCjE
Central Nervous System Disorder[accessedResource: NCIt:C2934][accessDate: 04-11-2010]
James Malone
nervous system disease
Central Nervous System Disorder
Central Nervous System Disease[accessedResource: NCIt:C2934][accessDate: 04-11-2010]
Central Nervous System Disease
NCIt:C2934
K562
Natural Language Generator 8th April 2010
James Malone
A K562 is a cell line.
A K562 is bearer of a chronic myelogenous leukemia.
Ele Holloway
sucrose
sacarosa
http://www.ebi.ac.uk/efo/EFO_0001616
Cane sugar
A glycosyl glycoside that has formula C12H22O11.
CHEBI:17992
Saccharose
beta-D-Fruf-(2<->1)-alpha-D-Glcp
InChI=1/C12H22O11/c13-1-4-6(16)8(18)9(19)11(21-4)23-12(3-15)10(20)7(17)5(2-14)22-12/h4-11,13-20H,1-3H2/t4-,5-,6-,7-,8+,9-,10+,11-,12+/m1/s1
C12H22O11
Sacharose
beta-D-fructofuranosyl alpha-D-glucopyranoside
1-alpha-D-Glucopyranosyl-2-beta-D-fructofuranoside
OC[C@H]1O[C@H](O[C@]2(CO)O[C@H](CO)[C@@H](O)[C@@H]2O)[C@H](O)[C@@H](O)[C@@H]1O
InChIKey=CZMRCDWAGMRECN-UGDNZRGBBE
table sugar
GlcN
Glukosamin
CHEBI:5417
http://www.ebi.ac.uk/efo/EFO_0001544
C6H13NO5
glucosamine
Glucosamin
2-amino-2-deoxyglucose
Tomasz Adamusiak
interferon alpha
James Malone
HCC1500
STRUCTURE_ChemicalName_IUPAC:ethyl (2Z)-2-chloro-3-[2-chloro-5-(1,3-dioxo-1,3,4,5,6,7-hexahydro-2H-isoindol-2-yl)phenyl]acrylate
STRUCTURE_Formula:C19H17Cl2NO4
DSSTox_CID:16753
DSSTox_Generic_SID:36753
Tomasz Adamusiak
cinidon-ethyl
CASRN:142891-20-1
James Malone
Ele Holloway
CASRN:10213-10-2
James Malone
Tomasz Adamusiak
STRUCTURE_Formula:H4Na2O6W
DSSTox_Generic_SID:32079
sodium tungstate dihydrate
STRUCTURE_ChemicalName_IUPAC:sodium tungstate dihydrate
Ele Holloway
DSSTox_CID:12079
Hyperplastic[accessedResource: NCIt:C3113][accessDate: 04-11-2010]
Hyperplastic
An abnormal increase in the number of cells in an organ or a tissue with consequent enlargement.
James Malone
Tomasz Adamusiak
An abnormal increase in the number of cells in an organ or a tissue with consequent enlargement.[accessedResource: NCIt:C3113][accessDate: 04-11-2010]
NCIt:C3113
An abnormal increase in the number of (otherwise normal) cells in an organ or a tissue with consequent enlargement.
hyperplasia
Tomasz Adamusiak
presumptive diencephalon
ZFA:0000574
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#labeling[accessedResource: MO_471][accessDate: 04-11-2010]
The process of marking a material in some way for experimental purposes. E.g. the labelling of a nucleic acid with biotin in a microarray experiment
labelling
MO_471
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#labeling
James Malone
Jie Zheng
Ele Holloway
James Malone
COLO320DM
James Malone
plant developmental tissue
MAT:0000518
James Malone
male inflorescence
PO:0020136
ZEA:0015085
Ele Holloway
James Malone
YCC7
Ele Holloway
James Malone
HT1080
CHEBI:24937
James Malone
http://www.ebi.ac.uk/efo/EFO_0001826
jasmonic acids
jasmonates
Tomasz Adamusiak
optic primordium
ZFA:0000570
camptothecin
CPT
C20H16N2O4
Camptothecine
InChIKey=VSJKWCGYPAHWDS-FQEVSTJZBY
20(S)-camptothecine
CHEBI:27656
D-camptothecin
(S)-(+)-camptothecin
21,22-Secocamptothecin-21-oic acid lactone
http://www.ebi.ac.uk/efo/EFO_0001498
A pyranoindolizinoquinoline that has formula C20H16N2O4.
James Malone
(4S)-4-ethyl-4-hydroxy-1H-pyrano[3',4':6,7]indolizino[1,2-b]quinoline-3,14(4H,12H)-dione
CC[C@@]1(O)C(=O)OCc2c1cc1-c3nc4ccccc4cc3Cn1c2=O
InChI=1/C20H16N2O4/c1-2-20(25)14-8-16-17-12(7-11-5-3-4-6-15(11)21-17)9-22(16)18(23)13(14)10-26-19(20)24/h3-8,25H,2,9-10H2,1H3/t20-/m0/s1
Tomasz Adamusiak
pterosphenoid
ZFA:0000419
The hypopharynx is part of the pharynx that lies below the upper edge of the epiglottis and opens into the larynx and esophagus.
The portion of the pharynx that lies below the upper edge of the epiglottis and opens into the larynx and esophagus.[accessedResource: BTO:0001740][accessDate: 10-05-2010]
Obsolete - duplication use laryngopharynx EFO_0001388 instead
laryngopharynx
true
hypopharynx[accessedResource: BTO:0001740][accessDate: 10-05-2010]
NCIt:C12246
laryngopharynx[accessedResource: BTO:0001740][accessDate: 10-05-2010]
pars laryngea pharyngis[accessedResource: BTO:0001740][accessDate: 10-05-2010]
The lower part of the pharynx that connects to the esophagus.[accessedResource: NCIt:C12246][accessDate: 10-05-2010]
hypopharynx
obsolete_hypopharynx
The lower part of the pharynx that connects to the esophagus.
1.5
The portion of the pharynx that lies below the upper edge of the epiglottis and opens into the larynx and esophagus.
BTO:0001740
pars laryngea pharyngis
James Malone
James Malone
conjunctival epithelium
NCIt:C32365
Jie Zheng
Tomasz Adamusiak
embryonic day 17.5
axial skeleton[accessedResource: TAO:0000317][accessDate: 04-11-2010]
The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.
ZFA:0000317
NIFSTD:sao1145756102
axial skeleton
Backbone[accessedResource: FMAID:13478][accessDate: 04-11-2010]
Spine
The post-cranial structural components forming the long axis of the vertebrate body; usually consists of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.[accessedResource: TAO:0000317][accessDate: 04-11-2010]
FMAID:13478
TAO:0000317
AAO:0000034
The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.[accessedResource: ZFA:0000317][accessDate: 04-11-2010]
Tomasz Adamusiak
vertebral column structure
EMAPA:17214
vertebral column
MA:0000308
Spinal column[accessedResource: FMAID:13478][accessDate: 04-11-2010]
postcranial axial skeleton[accessedResource: TAO:0000317][accessDate: 04-11-2010]
EHDAA:5049
Spinal column
James Malone
SAEL:121
Vertebral column[accessedResource: FMAID:13478][accessDate: 04-11-2010]
postcranial axial skeleton
Spine[accessedResource: NIFSTD:sao1145756102][accessDate: 04-11-2010]
The post-cranial structural components forming the long axis of the vertebrate body; usually consists of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.
Backbone
Kaposi - Kaposi's Sarcoma
Multiple Hemorrhagic Sarcoma
KS[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
NCIt:C9087
James Malone
Kaposi - Kaposi's Sarcoma[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
A multicentric, malignant neoplastic vascular proliferation characterized by bluish-red cutaneous nodules, usually on the legs, toes, or feet, that slowly increase in size and number and spread to more proximal sites. The tumors have endothelium-lined channels and vascular spaces mixed with aggregates of spindle-shaped cells; they may remain confined to skin and subcutaneous tissue, but widespread visceral involvement may occur.
Kaposi's Sarcoma[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
Kaposi's sarcoma cell
BTO:0002071
A malignant neoplasm characterized by a vascular proliferation which usually contains blunt endothelial cells. Erythrocyte extravasation and hemosiderin deposition are frequently present. The most frequent site of involvement is the skin; however it may also occur internally. It generally develops in people with compromised immune systems including those with acquired immune deficiency syndrome (AIDS).[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
A multicentric, malignant neoplastic vascular proliferation characterized by bluish-red cutaneous nodules, usually on the legs, toes, or feet, that slowly increase in size and number and spread to more proximal sites. The tumors have endothelium-lined channels and vascular spaces mixed with aggregates of spindle-shaped cells; they may remain confined to skin and subcutaneous tissue, but widespread visceral involvement may occur.[accessedResource: BTO:0002071][accessDate: 04-11-2010]
idiopathic multiple pigmented hemorrhagic sarcoma cell
Kaposi Sarcoma[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
multiple idiopathic hemorrhagic sarcoma cell
idiopathic multiple pigmented hemorrhagic sarcoma cell[accessedResource: BTO:0002071][accessDate: 04-11-2010]
Kaposi Sarcoma
Multiple Hemorrhagic Sarcoma[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
Kaposi's Sarcoma
multiple idiopathic hemorrhagic sarcoma cell[accessedResource: BTO:0002071][accessDate: 04-11-2010]
KS
A malignant neoplasm characterized by a vascular proliferation which usually contains blunt endothelial cells. Erythrocyte extravasation and hemosiderin deposition are frequently present. The most frequent site of involvement is the skin; however it may also occur internally. It generally develops in people with compromised immune systems including those with acquired immune deficiency syndrome (AIDS).
MAT:0000063
EVM:2990009
XAO:1000005
gastrula
gastrulating mbryo
FBdv:00005317
WBIs:0000010
gastrula stage
gastrulating mbryo[accessedResource: MAT:0000063][accessDate: 04-11-2010]
gastrula[accessedResource: MAT:0000063][accessDate: 04-11-2010]
James Malone
The early developmental stage that, through embryological development, ultimately becomes an adult individual. In plants, that portion of a seed that will form the growing seedling following germination; it has a radicle, apical meristem, and embryonic leaf or leaves.
PO:0009009
BTO:0001233
The early developmental stage that, through embryological development, ultimately becomes an adult individual. In plants, that portion of a seed that will form the growing seedling following germination; it has a radicle, apical meristem, and embryonic leaf or leaves.[accessedResource: BTO:0001233][accessDate: 04-11-2010]
plant embryo
embryo
James Malone
ZEA:0015179
embryo[accessedResource: MAT:0000226][accessDate: 04-11-2010]
MAT:0000226
plant germ
GRO:0005343
GRO:0005343[accessedResource: BTO:0001233][accessDate: 04-11-2010]
plant germ[accessedResource: BTO:0001233][accessDate: 04-11-2010]
James Malone
plant fluid
MAT:0000347
James Malone
knee joint
FMA:35175
knee
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#timepoint[accessedResource: MO_738][accessDate: 04-11-2010]
James Malone
Jie Zheng
Tomasz Adamusiak
timepoint
MO_738
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#timepoint
Ele Holloway
James Malone
JCRB0081
RERF-LC-MS
A cell found in seeded plants.[accessedResource: CL:0000610][accessDate: 04-11-2010]
Tomasz Adamusiak
A cell found in seeded plants.
plant cell
CL:0000610
Rattus norvegicus
Rattus sp. strain Wistar
rat
http://www.ebi.ac.uk/efo/EFO_0000104
Norway rat
James Malone
BN
Rattus rattiscus
http://www.informatics.jax.org/external/festing/rat/docs/BN.shtml
Rattus norwegicus
common rat
rats
Rattus norvegicus8
brown rat
Rattus norvegicus, commonly Brown or Norway rat, is a rat strain as described in http://www.informatics.jax.org/external/festing/rat/docs/BN.shtml
Gunn rats
Tomasz Adamusiak
dentary
ZFA:0000191
Tomasz Adamusiak
bulbus arteriosus
ZFA:0000173
Cervix Uteri Adenocarcinoma[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
Adenocarcinoma of Uterine Cervix[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
Adenocarcinoma of the Uterine Cervix[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
Adenocarcinoma of Uterine Cervix
Adenocarcinoma of Cervix[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
An adenocarcinoma arising from the cervical epithelium. It accounts for approximately 15% of invasive cervical carcinomas. Increased numbers of sexual partners and human papilloma virus (HPV) infection are risk factors. Grossly, advanced cervical adenocarcinoma may present as an exophytic mass, an ulcerated lesion, or diffuse cervical enlargement. Microscopically, the majority of cervical adenocarcinomas are of the endocervical (mucinous) type.
NCIt:C4029
Adenocarcinoma of the Cervix Uteri
Adenocarcinoma of the Uterine Cervix
Cervix Uteri Adenocarcinoma
Adenocarcinoma of Cervix Uteri[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
Adenocarcinoma of Cervix Uteri
Adenocarcinoma of the Cervix Uteri[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
cervical adenocarcinoma
Adenocarcinoma of the Cervix
DOID:3702
Uterine Cervix Adenocarcinoma
Uterine Cervix Adenocarcinoma[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
Cervix Adenocarcinoma[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
Adenocarcinoma of the Cervix[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
James Malone
Adenocarcinoma of Cervix
An adenocarcinoma arising from the cervical epithelium. It accounts for approximately 15% of invasive cervical carcinomas. Increased numbers of sexual partners and human papilloma virus (HPV) infection are risk factors. Grossly, advanced cervical adenocarcinoma may present as an exophytic mass, an ulcerated lesion, or diffuse cervical enlargement. Microscopically, the majority of cervical adenocarcinomas are of the endocervical (mucinous) type.[accessedResource: NCIt:C4029][accessDate: 04-11-2010]
Cervix Adenocarcinoma
Tomasz Adamusiak
ILSXISS60/TejJ
http://jaxmice.jax.org/strain/009311.html
Ele Holloway
James Malone
accelerated neurological senescence
tail fin
ZFA:0001058
James Malone
tail fin[accessedResource: ZFA:0001058][accessDate: 04-11-2010]
tail[accessedResource: ZFA:0001058][accessDate: 04-11-2010]
tail
caudal fin
Fin that is the most posterior median fin. It is composed of a complex of three modified centra and modified neural and hemal arches and spines.
Fin that is the most posterior median fin. It is composed of a complex of three modified centra and modified neural and hemal arches and spines.[accessedResource: ZFA:0001058][accessDate: 04-11-2010]
James Malone
IMR-90
James Malone
R46
true
epigenetic factor
An adenocarcinoma of the breast arising from the lobules. This is a relatively uncommon carcinoma, represents approximately 10% of the breast adenocarcinomas and is often bilateral or multifocal.[accessedResource: NCIt:C3771][accessDate: 10-05-2010]
Lobular Carcinomas
Lobular carcinoma NOS (morphologic abnormality)[accessedResource: DOID:3457][accessDate: 10-05-2010]
obsolete_lobular breast carcinoma
Lobular carcinoma, NOS[accessedResource: SNOMEDCT:89740008][accessDate: 10-05-2010]
Duplicate with invasive lobular carcinoma (EFO_0000553)
GeneRIF:15695379
James Malone
Lobular carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:89740008][accessDate: 10-05-2010]
GeneRIF:12907138
MSH:D018275
GeneRIF:12661036
[M]Lobular carcinoma NOS (morphologic abnormality)
Lobular carcinoma, NOS
An adenocarcinoma of the breast arising from the lobules. This is a relatively uncommon carcinoma, represents approximately 10% of the breast adenocarcinomas and is often bilateral or multifocal.
Lobular carcinoma of the breast[accessedResource: DOID:3457][accessDate: 10-05-2010]
A infiltrating (invasive) breast cancer, relatively uncommon, accounting for only 5%-10% of breast tumors in most series. It is often an area of ill-defined thickening in the breast, in contrast to the dominant lump characteristic of ductal carcinoma. It is typically composed of small cells in a linear arrangement with a tendency to grow around ducts and lobules. There is likelihood of axillary nodal involvement with metastasis to meningeal and serosal surfaces. (DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p1205)
SNOMEDCT:89740008
Lobular carcinoma of breast
Lobular carcinoma of breast (disorder)
Lobular Carcinoma[accessedResource: MSH:D018275][accessDate: 10-05-2010]
[M]Lobular carcinoma NOS
Lobular Carcinoma of Breast[accessedResource: NCIt:C3771][accessDate: 10-05-2010]
Lobular carcinoma (morphologic abnormality)
Lobular Adenocarcinoma[accessedResource: NCIt:C3771][accessDate: 10-05-2010]
Lobular Breast Carcinoma
true
DOID:3457
Lobular Breast Carcinoma[accessedResource: NCIt:C3771][accessDate: 10-05-2010]
Lobular adenocarcinoma
[M]Lobular carcinoma NOS[accessedResource: SNOMEDCT:189713007][accessDate: 10-05-2010]
Carcinomas, Lobular[accessedResource: MSH:D018275][accessDate: 10-05-2010]
SNOMEDCT:278054005
A infiltrating (invasive) breast cancer, relatively uncommon, accounting for only 5%-10% of breast tumors in most series. It is often an area of ill-defined thickening in the breast, in contrast to the dominant lump characteristic of ductal carcinoma. It is typically composed of small cells in a linear arrangement with a tendency to grow around ducts and lobules. There is likelihood of axillary nodal involvement with metastasis to meningeal and serosal surfaces. (DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p1205)[accessedResource: MSH:D018275][accessDate: 10-05-2010]
NCIt:C3771
1.5
Lobular carcinoma of the breast
Lobular carcinoma of breast (disorder)[accessedResource: DOID:3457][accessDate: 10-05-2010]
[M]Lobular carcinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189713007][accessDate: 10-05-2010]
Infiltrating lobular carcinoma
Infiltrating lobular carcinoma[accessedResource: SNOMEDCT:89740008][accessDate: 10-05-2010]
GeneRIF:15803365
SNOMEDCT:189713007
Carcinoma, Lobular
Lobular carcinoma NOS (morphologic abnormality)
An assay in which the methylation state of DNA is determined and is compared between samples using sequencing based technology
methylation profiling by high throughput sequencing
Ele Holloway
James Malone
cell line cell
CL:0000010
James Malone
CS57867 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158891&type=germplasm
CS57867
http://www.arabidopsis.org/servlets/TairObject?id=1005158891&type=germplasm
James Malone
http://www.ebi.ac.uk/efo/EFO_0002649
Mus spretus
Algerian Mouse
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_component_comparison_design[accessedResource: MO_1019][accessDate: 04-11-2010]
Tomasz Adamusiak
cell component comparison design
MO_1019
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_component_comparison_design
Armpit[accessedResource: NCIt:C12674][accessDate: 04-11-2010]
The underside concavity where the arm and the shoulder are joined.[accessedResource: NCIt:C12674][accessDate: 04-11-2010]
Underarm[accessedResource: NCIt:C12674][accessDate: 04-11-2010]
axilla
The underside concavity where the arm and the shoulder are joined.
Underarm
NCIt:C12674
Armpit
James Malone
Ele Holloway
James Malone
NCI-H226
nervus sciaticus
sciatic nerve
nervus ischiadicus
BTO:0001221
James Malone
nervus sciaticus[accessedResource: BTO:0001221][accessDate: 04-11-2010]
The largest nerve of the body: origin, sacral plexus-L4-S3; it leaves the pelvis through the greater sciatic foramen; branches, divides into the tibial and common peroneal nerves, usually in lower third of thigh; distribution-see individual branches, in this table; modality, general sensory and motor.
The longest single nerve that is formed by the merging of the ventral rami of the L4, L5, and S1 in the pelvis and passes down the lower limb where it divides into the common peroneal and tibial nerves.[accessedResource: NCIt:C52810][accessDate: 04-11-2010]
nervus ischiadicus[accessedResource: BTO:0001221][accessDate: 04-11-2010]
NCIt:C52810
The largest nerve of the body: origin, sacral plexus-L4-S3; it leaves the pelvis through the greater sciatic foramen; branches, divides into the tibial and common peroneal nerves, usually in lower third of thigh; distribution-see individual branches, in this table; modality, general sensory and motor.[accessedResource: BTO:0001221][accessDate: 04-11-2010]
The longest single nerve that is formed by the merging of the ventral rami of the L4, L5, and S1 in the pelvis and passes down the lower limb where it divides into the common peroneal and tibial nerves.
FMA:19034
James Malone
MM1
A muscle in the back of the thigh. Its action involves the knee flexion and hip extension.[accessedResource: NCIt:C53147][accessDate: 04-11-2010]
James Malone
A muscle in the back of the thigh. Its action involves the knee flexion and hip extension.
biceps femoris
NCIt:C53147
Tomasz Adamusiak
visual anlage in statu nascendi
FBbt:00005425
Ele Holloway
James Malone
NCI-H522
BTO:0002483
James Malone
ventricular septum
interventricular septum of heart
ventricular septum[accessedResource: BTO:0002483][accessDate: 04-11-2010]
interventriculare cordis[accessedResource: BTO:0002483][accessDate: 04-11-2010]
The partition that separates the left ventricle from the right ventricle, consisting of a muscular and a membranous part.[accessedResource: BTO:0002483][accessDate: 04-11-2010]
Cardiac septum which separates the right ventricle from the left ventricle.
interventriculare cordis
The partition that separates the left ventricle from the right ventricle, consisting of a muscular and a membranous part.
interventricular septum
FMA:7133
interventricular septum of heart[accessedResource: BTO:0002483][accessDate: 04-11-2010]
Tomasz Adamusiak
aortic arch
ZFA:0005004
Ele Holloway
James Malone
Tomasz Adamusiak
neuromedin U
CASRN:117505-80-3
DSSTox_Generic_SID:40559
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#consultant[accessedResource: MO_984][accessDate: 04-11-2010]
Tomasz Adamusiak
consultant
MO_984
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#consultant
Tomasz Adamusiak
rhombomere 6
ZFA:0000069
An immature lymphocyte that has enlarged in response to antigenic stimulation.[accessedResource: NCIt:C13013][accessDate: 04-11-2010]
James Malone
lymphoblast
Often referred to as a blast cell. Unlike other usages of the suffix -blast a lymphoblast is a further differentiation of a lymphocyte, T- or B-, occasioned by an antigenic stimulus. The lymphoblast usually develops by enlargement of a lymphocyte, active re-entry to the S phase of the cell cycle, mitogenesis and production of much m-RNA and ribosomes.[accessedResource: BTO:0000772][accessDate: 04-11-2010]
Often referred to as a blast cell. Unlike other usages of the suffix -blast a lymphoblast is a further differentiation of a lymphocyte, T- or B-, occasioned by an antigenic stimulus. The lymphoblast usually develops by enlargement of a lymphocyte, active re-entry to the S phase of the cell cycle, mitogenesis and production of much m-RNA and ribosomes.
An immature lymphocyte that has enlarged in response to antigenic stimulation.
BTO:0000772
NCIt:C13013
James Malone
CS57771 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158795&type=germplasm
CS57771
http://www.arabidopsis.org/servlets/TairObject?id=1005158795&type=germplasm
(-)-epigallocatechin 3-gallate
InChIKey=WMBWREPUVVBILR-WIYYLYMNBM
http://www.ebi.ac.uk/efo/EFO_0002670
EGCG
epigallocatechin gallate
Oc1cc(O)c2C[C@@H](OC(=O)c3cc(O)c(O)c(O)c3)[C@H](Oc2c1)c1cc(O)c(O)c(O)c1
InChI=1/C22H18O11/c23-10-5-12(24)11-7-18(33-22(31)9-3-15(27)20(30)16(28)4-9)21(32-17(11)6-10)8-1-13(25)19(29)14(26)2-8/h1-6,18,21,23-30H,7H2/t18-,21-/m1/s1
(-)-Epigallocatechin-3-o-gallate
(2R,3R)-5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromen-3-yl 3,4,5-trihydroxybenzoate
http://www.ebi.ac.uk/efo/EFO_0002491
James Malone
Ele Holloway
dibenzoazepine
dibenzazepine
CHEBI:47804
dibenzoazepines
dibenzazepines
Ele Holloway
James Malone
Tomasz Adamusiak
basic fibroblast growth factor
CASRN:106096-93-9
DSSTox_Generic_SID:40423
bFGF
A group of organs surrounded by loose connective tissue, separating the two pleural sacs, between the sternum anteriorly and the vertebral column posteriorly as well as from the thoracic inlet superiorly to the diaphragm inferiorly. The mediastinum contains the heart and pericardium, the bases of the great vessels, the trachea and bronchi, esophagus, thymus, lymph nodes, thoracic duct, phrenic and vagus nerves, and other structures and tissues.[accessedResource: NCIt:C12748][accessDate: 04-11-2010]
Tomasz Adamusiak
A group of organs surrounded by loose connective tissue, separating the two pleural sacs, between the sternum anteriorly and the vertebral column posteriorly as well as from the thoracic inlet superiorly to the diaphragm inferiorly. The mediastinum contains the heart and pericardium, the bases of the great vessels, the trachea and bronchi, esophagus, thymus, lymph nodes, thoracic duct, phrenic and vagus nerves, and other structures and tissues.
mediastinum
NCIt:C12748
kelvin
http://www.ebi.ac.uk/efo/EFO_0001689
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#K
A thermodynamic temperature unit which is equal to the fraction 1/273.16 of the thermodynamic temperature of the triple point of water.
A kelvin is a thermodynamic temperature unit which is equal to the fraction 1/273.16 of the thermodynamic temperature of the triple point of water.
true
K
MO_614
Jie Zheng
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#K[accessedResource: MO_614][accessDate: 04-11-2010]
Tomasz Adamusiak
blood vasculature[accessedResource: TAO:0001079][accessDate: 04-11-2010]
circulatory system[accessedResource: TAO:0001079][accessDate: 04-11-2010]
blood vasculature
Any of the vessels through which blood circulates in the body.
vasculature[accessedResource: MAT:0000393][accessDate: 04-11-2010]
MFO:0002960
vasculature
blood vessel
SAEL:9
circulatory system
blood vessels
BTO:0001102
vessel
TAO:0001079
James Malone
EV:0100456
Any of the vessels through which blood circulates in the body.[accessedResource: BTO:0001102][accessDate: 04-11-2010]
blood vessels[accessedResource: TAO:0001079][accessDate: 04-11-2010]
MAT:0000393
vessel[accessedResource: MAT:0000393][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
embryonic day 16.5
Tomasz Adamusiak
ILSXISS50/TejJ
http://jaxmice.jax.org/strain/009309.html
James Malone
NIH3T3-L1
An organ that constitutes the external surface of the body. It consists of the epidermis, dermis, and skin appendages.
James Malone
Skin
integumental cell
An organ that constitutes the external surface of the body. It consists of the epidermis, dermis, and skin appendages.[accessedResource: NCIt:C12470][accessDate: 04-11-2010]
Skin[accessedResource: NCIt:C12470][accessDate: 04-11-2010]
Integument
NCIt:C12470
Integument[accessedResource: NCIt:C12470][accessDate: 04-11-2010]
Orbital region
EV:0100336
TGMA:0000024
The compound eye is a light sensing organ composed of ommatidia.
A cavitated compound organ that transduces light waves into neural signals.[accessedResource: TAO:0000107][accessDate: 04-11-2010]
XAO:0000179
adult compound eye
eyeball
EHDAA:936
The compound eye is a light sensing organ composed of ommatidia.[accessedResource: FBbt:00004508][accessDate: 04-11-2010]
Facettenauge
FBbt:00004508
Cavitated compound organ that consists of the neural retina, lens, cornea and iris and is the sensory apparatus of the visual system.[accessedResource: ZFA:0000107][accessDate: 04-11-2010]
Komplexauge
FMAID:54448
A cavitated compound organ that transduces light waves into neural signals.
visual apparatus
MA:0000261
TAO:0001127
Tomasz Adamusiak
Orbital part of face
Cavitated compound organ that consists of the neural retina, lens, cornea and iris and is the sensory apparatus of the visual system.
Komplexauge[accessedResource: TGMA:0000024][accessDate: 04-11-2010]
compound eye[accessedResource: FBbt:00004508][accessDate: 04-11-2010]
MAT:0000140
visual system
ZFA:0000107
adult compound eye[accessedResource: MAT:0000140][accessDate: 04-11-2010]
eyes
eye
eye structure
TAO:0000107
A light-perceptive organ consisting of an aggregation of optic elements (ommatidia) generally located on each side of the head; the cuticular part (cornea) consists of several hundred circular corneal facets (lenses); bounded by the ocular sclerite.[accessedResource: TGMA:0000024][accessDate: 04-11-2010]
An organ of sight; especially: a nearly spherical hollow organ that is lined with a sensitive retina, is lodged in a bony orbit in the skull, is the vertebrate organ of sight, and is normally paired.n2: All the visible structures within and surrounding the orbit and including eyelids, eyelashes, and eyebrows.
eyeball[accessedResource: TAO:0000107][accessDate: 04-11-2010]
visual apparatus[accessedResource: MAT:0000140][accessDate: 04-11-2010]
MFO:0003480
zusammengesetztes Auge[accessedResource: TGMA:0000024][accessDate: 04-11-2010]
BTO:0000439
compound eye
EMAPA:16198
James Malone
An organ of sight; especially: a nearly spherical hollow organ that is lined with a sensitive retina, is lodged in a bony orbit in the skull, is the vertebrate organ of sight, and is normally paired.n2: All the visible structures within and surrounding the orbit and including eyelids, eyelashes, and eyebrows.[accessedResource: BTO:0000439][accessDate: 04-11-2010]
Orbital region[accessedResource: FMAID:54448][accessDate: 04-11-2010]
NIFSTD:birnlex_1169
A light-perceptive organ consisting of an aggregation of optic elements (ommatidia) generally located on each side of the head; the cuticular part (cornea) consists of several hundred circular corneal facets (lenses); bounded by the ocular sclerite.
eye[accessedResource: ZFA:0000107][accessDate: 04-11-2010]
AAO:0000632
visual_system[accessedResource: MAT:0000140][accessDate: 04-11-2010]
Facettenauge[accessedResource: TGMA:0000024][accessDate: 04-11-2010]
TADS:0000061
zusammengesetztes Auge
eyes[accessedResource: MAT:0000140][accessDate: 04-11-2010]
Ele Holloway
James Malone
NCI-H187
arsenite(3-)
15502-74-6
As(III); arsenite
7-OH-PIPAT; (RS)-trans-7-Hydroxy-2-[N-propyl-N-(3'-iodo-2'-propenyl )amino]tetralin maleate
STRUCTURE_ChemicalName_IUPAC:7-{[(2E)-3-iodoprop-2-en-1-yl](propyl)amino}-5,6,7,8-tetrahydronaphthalen-2-ol (2Z)-but-2-enedioate (salt)
Ele Holloway
Tomasz Adamusiak
DSSTox_Generic_SID:42582
7-hydroxy-PIPAT maleate
CASRN:159651-91-9
STRUCTURE_Formula:C20H26INO5
DSSTox_CID:22582
James Malone
James Malone
An assay in which the transcriptome of a biological sample is analysed.
transcription profiling
ArrayExpress production team
Ele Holloway
HCC2218
James Malone
1-benzofuran
Benzofuran
C8H6O
Ele Holloway
InChIKey=IANQTJSKSUMEQM-UHFFFAOYAU
CHEBI:35260
benzo[b]furan
c1ccc2occc2c1
coumaron
2,3-benzofuran
James Malone
cumarone
http://www.ebi.ac.uk/efo/EFO_0002486
InChI=1/C8H6O/c1-2-4-8-7(3-1)5-6-9-8/h1-6H
A benzofuran that has formula C8H6O.
coumarone
Ele Holloway
James Malone
NCI-H810
James Malone
Neural stem cell is characterized as an undifferentiated cell that originates from the neuroectoderm and has the capacity both to perpetually self-renew without differentiating and to generate multiple types of lineage-restricted progenitors.[accessedResource: CL:0000047][accessDate: 04-11-2010]
neuronal stem cell
neural stem progenitor cell
neural stem cell
Neural stem cell is characterized as an undifferentiated cell that originates from the neuroectoderm and has the capacity both to perpetually self-renew without differentiating and to generate multiple types of lineage-restricted progenitors.
CL:0000047
Tomasz Adamusiak
embryonic optic lobe primordium
FBbt:00000186
DSSTox_Generic_SID:37672
Ele Holloway
Tomasz Adamusiak
sodium butyrate
STRUCTURE_Formula:C4H7NaO2
DSSTox_CID:17672
CASRN:156-54-7
STRUCTURE_ChemicalName_IUPAC:sodium butyrate
James Malone
Malignant Neoplasm of Central Nervous System[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Cancer of CNS[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant Tumor of Central Nervous System[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
NCIt:C4627
Cancer of the Central Nervous System
Benign and malignant central nervous system neoplasms derived from glial cells (i.e., astrocytes, oligodendrocytes, and ependymocytes). Astrocytes may give rise to astrocytomas ( ASTROCYTOMA) or glioblastoma multiforme (see GLIOBLASTOMA). Oligodendrocytes give rise to oligodendrogliomas ( OLIGODENDROGLIOMA) and ependymocytes may undergo transformation to become EPENDYMOMA; CHOROID PLEXUS NEOPLASMS; or colloid cysts of the third ventricle (MeSH).
Malignant CNS Neoplasm
Cancer of Central Nervous System[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant Neoplasm of CNS
Malignant Central Nervous System Neoplasm
Cancer of Central Nervous System
Malignant Tumor of CNS
Malignant Central Nervous System Neoplasm[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant Tumor of the CNS
Malignant Neoplasm of Central Nervous System
Central Nervous System Neoplasms, Malignant
CNS Cancer[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Cancer of the Central Nervous System[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
central nervous system cancer
CNS Malignant Neoplasms[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Glial Cell Tumor
A primary or metastatic malignant neoplasm involving the brain or spinal cord. Representative examples include anaplastic astrocytoma, glioblastoma, anaplastic (malignant) meningioma, lymphoma, and metastatic carcinoma from another anatomic site.[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Benign and malignant central nervous system neoplasms derived from glial cells (i.e., astrocytes, oligodendrocytes, and ependymocytes). Astrocytes may give rise to astrocytomas ( ASTROCYTOMA) or glioblastoma multiforme (see GLIOBLASTOMA). Oligodendrocytes give rise to oligodendrogliomas ( OLIGODENDROGLIOMA) and ependymocytes may undergo transformation to become EPENDYMOMA; CHOROID PLEXUS NEOPLASMS; or colloid cysts of the third ventricle (MeSH).[accessedResource: NIFSTD:birnlex_12618][accessDate: 04-11-2010]
CNS Cancer
Central Nervous System Neoplasms, Malignant[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant CNS Tumor[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant Tumor of the Central Nervous System
Malignant CNS Tumor
A primary or metastatic malignant neoplasm involving the brain or spinal cord. Representative examples include anaplastic astrocytoma, glioblastoma, anaplastic (malignant) meningioma, lymphoma, and metastatic carcinoma from another anatomic site.
Malignant Central Nervous System Tumor[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant Neoplasm of the Central Nervous System[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant Neoplasm of CNS[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant CNS Neoplasms
Malignant Neoplasm of the Central Nervous System
Malignant Tumor of Central Nervous System
Glioma[accessedResource: NIFSTD:birnlex_12618][accessDate: 04-11-2010]
Cancer of the CNS
NIFSTD:birnlex_12618
Cancer of CNS
Malignant Tumor of the Central Nervous System[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Glioma
Malignant Tumor of the CNS[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant Central Nervous System Tumor
Tomasz Adamusiak
Malignant Neoplasm of the CNS[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Malignant CNS Neoplasm[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Glial Cell Tumor[accessedResource: NIFSTD:birnlex_12618][accessDate: 04-11-2010]
James Malone
Malignant Neoplasm of the CNS
Malignant Tumor of CNS[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Cancer of the CNS[accessedResource: NCIt:C4627][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
Severe Combined Immunodeficiency (SCID) mutant in C57BL6 genetic background mouse strain.
C57BL/6-scid
https://www.cbil.upenn.edu/RADQuerier/php/sampleInfo.php?assay_id=10943&&study_id=3144
James Malone
The temperature that a biosource is exposed to.
exposure temperature
Postrolandic gyrus[accessedResource: FMA:61896][accessDate: 04-11-2010]
Posterior central gyrus
FMA:61896
Postcentral convolution
postcentral gyrus
Postrolandic gyrus
Postcentral convolution[accessedResource: FMA:61896][accessDate: 04-11-2010]
Posterior central gyrus[accessedResource: FMA:61896][accessDate: 04-11-2010]
NCIt:C33346
James Malone
1.8
James Malone
Breast_Tumor_Luminal
tumour
merged with neoplasm EFO_0000616
true
NCI Metathesaurus
An abnormal mass of tissue that results from excessive cell division. Tumors perform no useful body function. They may be benign (not cancerous) or malignant (cancerous).
obsolete_tumor
Ele Holloway
James Malone
NCI-H2052
S-nitrosoglutathione
20613
40613
57564-91-7
C10H16N4O7S
g-glutamyl-S-nitrosocysteinylglycine
Larval:Days 7-13[accessedResource: ZFS:0000039][accessDate: 04-11-2010]
James Malone
larval day 7-13
ZFS:0000039
Larval:Days 7-13
James Malone
cervical neck region
Cortex of adrenal gland[accessedResource: NCIt:C12396][accessDate: 04-11-2010]
suprarenal cortex
MA:0000118
cortex glandulae suprarenalis
EV:0100136
The outer portion of the adrenal glands that produces several steroid hormones, including cortisol and aldosterone.[accessedResource: BTO:0000045][accessDate: 04-11-2010]
Cortical
BTO:0000045
NCIt:C12396
cortex glandulae suprarenalis[accessedResource: BTO:0000045][accessDate: 04-11-2010]
James Malone
MAT:0000494
Cortex of adrenal gland
Cortical[accessedResource: NCIt:C12396][accessDate: 04-11-2010]
The outer portion of the adrenal glands that produces several steroid hormones, including cortisol and aldosterone.
The outer layer of the adrenal gland. It secretes mineralocorticoids, androgens, and glucocorticoids. (MeSH)[accessedResource: NCIt:C12396][accessDate: 04-11-2010]
suprarenal cortex[accessedResource: BTO:0000045][accessDate: 04-11-2010]
XAO:0000165
The outer layer of the adrenal gland. It secretes mineralocorticoids, androgens, and glucocorticoids. (MeSH)
adrenal cortex
EMAPA:18427
Cortex of suprarenal gland
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#strain_or_line_design[accessedResource: MO_462][accessDate: 04-11-2010]
Tomasz Adamusiak
strain or line design
MO_462
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#strain_or_line_design
pigments
A pigment cell is a cell that contains pigment granules.[accessedResource: CL:0000147][accessDate: 04-11-2010]
A pigment cell is a cell that contains pigment granules.
pigment cells
pigmentation
chromatocyte
pigment
chromatophore[accessedResource: ZFA:0009090][accessDate: 04-11-2010]
pigment cells[accessedResource: MAT:0000159][accessDate: 04-11-2010]
pigment cell[accessedResource: CL:0000147][accessDate: 04-11-2010]
chromatophore
biological pigment
James Malone
http://www.ebi.ac.uk/efo/EFO_0000957
An endogenous molecular entity that results in a colour of an organism as the consequence of the selective absorption of light.
ZFA:0009090
MAT:0000159
pigmentation[accessedResource: MAT:0000159][accessDate: 04-11-2010]
pigment cell
chromatocyte[accessedResource: ZFA:0009090][accessDate: 04-11-2010]
NIFSTD:sao1231384859
AAO:0000430
Tomasz Adamusiak
MFO:0003360
CL:0000147
James Malone
CS57648 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158672&type=germplasm
CS57648
http://www.arabidopsis.org/servlets/TairObject?id=1005158672&type=germplasm
CHEBI:50249
anticoagulant
An agent that prevents blood clotting.
anticoagulante
anticoagulants
James Malone
http://www.ebi.ac.uk/efo/EFO_0001885
Obsolete: No longer required in EFO
James Malone
true
obsolete_bladder MMHCC
NCIt:C22729
Bladder (MMHCC)
James Malone
STRUCTURE_Formula:C4H10O2
CASRN:75-91-2
Ele Holloway
DSSTox_CID:4693
tert-butyl hydroperoxide
STRUCTURE_ChemicalName_IUPAC:tert-butyl hydroperoxide
DSSTox_Generic_SID:24693
Tomasz Adamusiak
leucocyte
CL:0000738
leukocyte[accessedResource: CL:0000738][accessDate: 10-05-2010]
white blood cell
use leukocyte EFO_0000566
A nucleated cell of the myeloid or lymphoid lineages, found in blood or other tissue.
immune cell
obsolete_white blood cell
leukocyte
James Malone
A nucleated cell of the myeloid or lymphoid lineages, found in blood or other tissue.[accessedResource: CL:0000738][accessDate: 10-05-2010]
white blood cell[accessedResource: CL:0000738][accessDate: 10-05-2010]
true
leucocyte[accessedResource: CL:0000738][accessDate: 10-05-2010]
immune cell[accessedResource: CL:0000738][accessDate: 10-05-2010]
Ele Holloway
James Malone
NCI-H1048
Tomasz Adamusiak
thecal cell layer
ZFA:0001113
Tomasz Adamusiak
brain vasculature
ZFA:0000099
James Malone
CS57560 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158584&type=germplasm
CS57560
http://www.arabidopsis.org/servlets/TairObject?id=1005158584&type=germplasm
H0287 is a cell line derived from normal lymphoblastoid cells
H0287
Ele Holloway
James Malone
NCI-H1437
Ele Holloway
James Malone
C32TG
Ele Holloway
James Malone
Calu3
Ele Holloway
James Malone
RL952
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#organism_status_design[accessedResource: MO_841][accessDate: 04-11-2010]
Tomasz Adamusiak
organism status design
MO_841
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#organism_status_design
Tomasz Adamusiak
hippocampus CA2
MA:0000951
birn_anat:birnlex_1362
Ele Holloway
DSSTox_Generic_SID:29668
NH4NO3
CASRN:6484-52-2
James Malone
STRUCTURE_ChemicalName_IUPAC:ammonium nitrate
STRUCTURE_Formula:H4N2O3
ammonium nitrate
DSSTox_CID:9668
Tomasz Adamusiak
Ele Holloway
James Malone
NCI-H2347
The state or condition of having a developing embryo or fetus in the body (uterus), after union of an ovum and spermatozoon, during the period from conception to birth.[accessedResource: NCIt:C25742][accessDate: 04-11-2010]
The state or condition of having a developing embryo or fetus in the body (uterus), after union of an ovum and spermatozoon, during the period from conception to birth.
pregnancy
NCIt:C25742
BTO:0001755
masseter[accessedResource: BTO:0001755][accessDate: 04-11-2010]
Masticatory Muscle[accessedResource: NCIt:C13074][accessDate: 04-11-2010]
A thick muscle in the cheek that closes the jaws during chewing.[accessedResource: BTO:0001755][accessDate: 04-11-2010]
Masticatory Muscles[accessedResource: NCIt:C13074][accessDate: 04-11-2010]
NCIt:C13074
Masticatory Muscle
A thick muscle in the cheek that closes the jaws during chewing.
Masticatory Muscles
masseter muscle
Muscles arising in the zygomatic arch that close the jaw. (MeSH)
James Malone
masseter
Muscles arising in the zygomatic arch that close the jaw. (MeSH)[accessedResource: NCIt:C13074][accessDate: 04-11-2010]
Osteomyelitis of upper arm (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
bone infection NOS, of the forearm (disorder)
Unspecified osteomyelitis of the shoulder region[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified infection of bone, upper arm[accessedResource: DOID:1019][accessDate: 04-11-2010]
Osteomyelitis of upper arm (disorder)
acute osteomyelitis involving ankle and foot
Unspecified osteomyelitis of the hand
Unspecified infection of bone of shoulder region[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis involving hand
Unspecified osteomyelitis of the ankle and foot (disorder)
osteomyelitis of hand[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis involving upper arm[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis[accessedResource: DOID:1019][accessDate: 04-11-2010]
bone infection NOS, of multiple sites (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis involving multiple sites
bone infection NOS, of multiple sites (disorder)
Unspecified osteomyelitis of the shoulder region
Osteomyelitis of forearm (disorder)
chronic osteomyelitis involving pelvic region and thigh
chronic osteomyelitis involving multiple sites
osteomyelitis
chronic osteomyelitis involving shoulder region[accessedResource: DOID:1019][accessDate: 04-11-2010]
osteomyelitis of multiple sites[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the shoulder region (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
bone infection NOS, of the lower leg (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the upper arm (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis of ankle and/or foot (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Osteomyelitis of forearm (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis involving pelvic region and thigh
Unspecified infection of bone, hand
bone infection NOS, of the shoulder region (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis involving ankle and foot[accessedResource: DOID:1019][accessDate: 04-11-2010]
Osteomyelitis of shoulder region (disorder)
Osteomyelitis of lower leg (disorder)
Osteomyelitis of multiple sites (disorder)
Unspecified osteomyelitis of the forearm (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis of the ankle and foot[accessedResource: DOID:1019][accessDate: 04-11-2010]
osteomyelitis of ankle and foot
acute osteomyelitis involving multiple sites[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis involving shoulder region[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the lower leg (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the ankle and foot (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis involving ankle and foot
Unspecified osteomyelitis of the shoulder region (disorder)
bone infection NOS, of the hand (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
bone infection NOS, of the hand (disorder)
Unspecified infection of bone, ankle and foot
bone infection NOS, of the upper arm (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
bone infection NOS, of the upper arm (disorder)
chronic osteomyelitis involving lower leg[accessedResource: DOID:1019][accessDate: 04-11-2010]
DOID:1019
osteomyelitis of forearm[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis
osteomyelitis of upper arm[accessedResource: DOID:1019][accessDate: 04-11-2010]
osteomyelitis of multiple sites
Unspecified osteomyelitis involving multiple sites[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis involving pelvic region and thigh[accessedResource: DOID:1019][accessDate: 04-11-2010]
osteomyelitis of shoulder region[accessedResource: DOID:1019][accessDate: 04-11-2010]
Osteomyelitis of shoulder region (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis of the ankle and foot (disorder)
acute osteomyelitis involving shoulder region
bone infection NOS, of the lower leg (disorder)
Unspecified osteomyelitis of multiple sites (disorder)
Unspecified infection of bone, lower leg[accessedResource: DOID:1019][accessDate: 04-11-2010]
Osteomyelitis of ankle and/or foot (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified infection of bone, lower leg
osteomyelitis of lower leg
Unspecified osteomyelitis of the ankle and foot
bone infection NOS, of the shoulder region (disorder)
osteomyelitis of lower leg[accessedResource: DOID:1019][accessDate: 04-11-2010]
Tomasz Adamusiak
osteomyelitis of shoulder region
chronic osteomyelitis of ankle and/or foot (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the upper arm (disorder)
Unspecified osteomyelitis of the forearm (disorder)
bone infection NOS, of the forearm (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the hand (disorder)
Osteomyelitis of ankle and/or foot (disorder)
Unspecified osteomyelitis involving multiple sites
Unspecified osteomyelitis of the ankle and foot[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis involving shoulder region
bone infection NOS, of ankle and foot (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
chronic osteomyelitis involving lower leg
chronic osteomyelitis involving upper arm[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis involving lower leg[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the hand[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis of the ankle and foot (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis of the ankle and foot[accessedResource: DOID:1019][accessDate: 04-11-2010]
osteomyelitis of ankle and foot[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis involving hand
acute osteomyelitis involving upper arm
chronic osteomyelitis[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified infection of bone, hand[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis involving ankle and foot[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified infection of bone, ankle and foot[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of multiple sites (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis of ankle and/or foot (disorder)
chronic osteomyelitis of the ankle and foot
osteomyelitis of hand
acute osteomyelitis involving pelvic region and thigh[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of the lower leg (disorder)
chronic osteomyelitis of the ankle and foot (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis involving lower leg
chronic osteomyelitis of ankle and/or foot (disorder)
Unspecified infection of bone of shoulder region
chronic osteomyelitis involving upper arm
acute osteomyelitis of the ankle and foot
Osteomyelitis of lower leg (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
acute osteomyelitis involving hand[accessedResource: DOID:1019][accessDate: 04-11-2010]
osteomyelitis of forearm
acute osteomyelitis of the ankle and foot (disorder)
Unspecified osteomyelitis of multiple sites[accessedResource: DOID:1019][accessDate: 04-11-2010]
bone infection NOS, of ankle and foot (disorder)
Unspecified infection of bone, upper arm
Unspecified osteomyelitis of the hand (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Osteomyelitis of multiple sites (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Osteomyelitis of hand (disorder)[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified infection of bone, forearm
Unspecified infection of bone, forearm[accessedResource: DOID:1019][accessDate: 04-11-2010]
osteomyelitis of upper arm
chronic osteomyelitis involving multiple sites[accessedResource: DOID:1019][accessDate: 04-11-2010]
Osteomyelitis of hand (disorder)
chronic osteomyelitis
chronic osteomyelitis involving hand[accessedResource: DOID:1019][accessDate: 04-11-2010]
Unspecified osteomyelitis of multiple sites
The quality of an organism that has never been sexually active.
virgin
Tomasz Adamusiak
capitellum
FBbt:00004784
Ele Holloway
James Malone
HuPT4
Tomasz Adamusiak
ILSXISS89/TejJ
http://jaxmice.jax.org/strain/009281.html
MRC-5 cell[accessedResource: BTO:0001590][accessDate: 04-11-2010]
James Malone
MRC-5
Ele Holloway
Homo sapiens (human) lung; fibroblast; normal cell line. The MRC-5 cell line was derived from normal lung tissue of a 14-week-old male fetus by J.P. Jacobs in September of 1966.[accessedResource: BTO:0001590][accessDate: 04-11-2010]
Homo sapiens (human) lung; fibroblast; normal cell line. The MRC-5 cell line was derived from normal lung tissue of a 14-week-old male fetus by J.P. Jacobs in September of 1966.
MRC5 cell
MRC-5 cell
MRC5 cell[accessedResource: BTO:0001590][accessDate: 04-11-2010]
MRC5
BTO:0001590
An RNA molecule that transfers the coding information for protein synthesis from the chromosomes to the ribosomes mRNA is formed from a DNA template by transcription. It may be a copy of a single gene or of several adjacent genes (polycistronic mRNA). On the ribosome, the sequence is converted into the programmed amino acid sequence through translation.
messenger RNA
mRNA
template RNA
Tomasz Adamusiak
branchiostegal ray 3
ZFA:0001280
The area of the occipital lobe of the cerebral cortex concerned with vision; it consists of the first visual area or striate c. (Brodmann's area 17) and two other areas, the second visual area or parastriate area (Brodmann's area 18) and the third visual area or peristriate area (Brodmann's area 19).[accessedResource: BTO:0001857][accessDate: 04-11-2010]
MAT:0000509
striate cortex
visual cortex
MA:0000914
Primary visual cortex
striate cortex[accessedResource: MAT:0000509][accessDate: 04-11-2010]
The area of the occipital lobe of the cerebral cortex concerned with vision; it consists of the first visual area or striate c. (Brodmann's area 17) and two other areas, the second visual area or parastriate area (Brodmann's area 18) and the third visual area or peristriate area (Brodmann's area 19).
James Malone
EV:0100469
BTO:0001857
FMAID:236871
losartan
(2-butyl-4-chloro-1-{[2'-(1H-tetrazol-5-yl)biphenyl-4-yl]methyl}-1H-imidazol-5-yl)methanol
114798-26-4
23227
3227
C22H23ClN6O
Hereditary progressive muscular dystrophy NOS[accessedResource: SNOMEDCT:193236007][accessDate: 04-11-2010]
GeneRIF:16098969
GeneRIF:16084089
SNOMEDCT:73297009
Hereditary progressive muscular dystrophy NOS (disorder)
GeneRIF:15221789
HERED PROG MUSC DYSTRPHY
Progressive muscular dystrophy
DOID:9884
GeneRIF:12736685
GeneRIF:15365169
GeneRIF:12011280
GeneRIF:15668457
Hereditary progressive muscular dystrophy NOS
GeneRIF:14512171
GeneRIF:12196663
Muscular Dystrophies
HERED PROG MUSC DYSTRPHY[accessedResource: ICD9:359.1][accessDate: 04-11-2010]
Myodystrophicas[accessedResource: MSH:D009136][accessDate: 04-11-2010]
A heterogeneous group of inherited MYOPATHIES, characterized by wasting and weakness of the SKELETAL MUSCLE. They are categorized by the sites of MUSCLE WEAKNESS; AGE OF ONSET; and INHERITANCE PATTERNS.[accessedResource: MSH:D009136][accessDate: 04-11-2010]
SNOMEDCT:193236007
Muscular dystrophy (disorder)[accessedResource: SNOMEDCT:73297009][accessDate: 04-11-2010]
Muscular dystrophy (disorder)
Hereditary progressive muscular dystrophy NOS (disorder)[accessedResource: DOID:9884][accessDate: 04-11-2010]
GeneRIF:16115818
GeneRIF:12145747
GeneRIF:15833432
MSH:D009136
Myodystrophies
Muscular dystrophy, NOS
GeneRIF:12189167
ICD9:359.1
GeneRIF:12654965
PMD - Progressive muscular dystrophy[accessedResource: SNOMEDCT:73297009][accessDate: 04-11-2010]
GeneRIF:16286249
GeneRIF:11792810
GeneRIF:12609503
Myodystrophies[accessedResource: MSH:D009136][accessDate: 04-11-2010]
Muscular Dystrophies[accessedResource: MSH:D009136][accessDate: 04-11-2010]
GeneRIF:12057917
Myodystrophy
GeneRIF:15848172
Progressive muscular dystrophy[accessedResource: SNOMEDCT:73297009][accessDate: 04-11-2010]
Hereditary progressive muscular dystrophy (disorder)[accessedResource: DOID:9884][accessDate: 04-11-2010]
PMD - Progressive muscular dystrophy
GeneRIF:12798793
GeneRIF:12091319
SNOMEDCT:193225000
GeneRIF:14985349
Myodystrophicas
GeneRIF:11829483
GeneRIF:14652796
Myodystrophy[accessedResource: MSH:D009136][accessDate: 04-11-2010]
GeneRIF:12657835
MD - Muscular dystrophy[accessedResource: SNOMEDCT:73297009][accessDate: 04-11-2010]
GeneRIF:12387816
Hereditary progressive muscular dystrophy[accessedResource: SNOMEDCT:193225000][accessDate: 04-11-2010]
GeneRIF:14741210
A heterogeneous group of inherited MYOPATHIES, characterized by wasting and weakness of the SKELETAL MUSCLE. They are categorized by the sites of MUSCLE WEAKNESS; AGE OF ONSET; and INHERITANCE PATTERNS.
muscular dystrophy
Muscular dystrophy NOS[accessedResource: DOID:9884][accessDate: 04-11-2010]
Hereditary progressive muscular dystrophy (disorder)
GeneRIF:12609502
GeneRIF:15371336
Myodystrophica
Hereditary progressive muscular dystrophy
GeneRIF:12783988
MD - Muscular dystrophy
Myodystrophica[accessedResource: MSH:D009136][accessDate: 04-11-2010]
James Malone
GeneRIF:16130093
GeneRIF:12192640
James Malone
A dermal neurofibroma is a neurofibroma that occurs in situ of the skin.
dermal neurofibroma
zebrafish cell line
A system of neurons that has the specialized function to produce and secrete hormones, and that constitutes, in whole or in part, an endocrine organ or system.[accessedResource: BTO:0002106][accessDate: 04-11-2010]
James Malone
A system of neurons that has the specialized function to produce and secrete hormones, and that constitutes, in whole or in part, an endocrine organ or system.
neurohemal organ
BTO:0002106
TADS:0000245
myocyte
Mature contractile cells, commonly known as myocytes, that form one of three kinds of muscle. The three types of muscle cells are skeletal (muscle fibers), cardiac (myocytes, cardiac), and smooth (myocytes, smooth muscle). They are derived from embryonic (precursor) muscle cells called myoblasts (MSH).[accessedResource: NIFSTD:sao519252327][accessDate: 04-11-2010]
NIFSTD:sao519252327
Mature contractile cells, commonly known as myocytes, that form one of three kinds of muscle. The three types of muscle cells are skeletal (muscle fibers), cardiac (myocytes, cardiac), and smooth (myocytes, smooth muscle). They are derived from embryonic (precursor) muscle cells called myoblasts (MSH).
A mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle. This cell has as part of its cytoplasm myofibrils organized in various patterns.
myocyte[accessedResource: CL:0000187][accessDate: 04-11-2010]
Tomasz Adamusiak
muscle cell
CL:0000187
James Malone
A mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle. This cell has as part of its cytoplasm myofibrils organized in various patterns.[accessedResource: CL:0000187][accessDate: 04-11-2010]
A mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle.
Larval:Days 14-20[accessedResource: ZFS:0000040][accessDate: 04-11-2010]
James Malone
larval day 14-20
ZFS:0000040
Larval:Days 14-20
Dermatopolymyositis, unspecified
MSH:D003882
Polymyositis with skin involvement
A subacute or chronic inflammatory disease of muscle and skin, marked by proximal muscle weakness and a characteristic skin rash. The illness occurs with approximately equal frequency in children and adults. The skin lesions usually take the form of a purplish rash (or less often an exfoliative dermatitis) involving the nose, cheeks, forehead, upper trunk, and arms. The disease is associated with a complement mediated intramuscular microangiopathy, leading to loss of capillaries, muscle ischemia, muscle-fiber necrosis, and perifascicular atrophy. The childhood form of this disease tends to evolve into a systemic vasculitis. Dermatomyositis may occur in association with malignant neoplasms. (From Adams et al., Principles of Neurology, 6th ed, pp1405-6)[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Polymyositis Dermatomyositis
Polymyositis-Dermatomyositides
[X]Dermatopolymyositis, unspecified (disorder)
DM - Dermatomyositis
GeneRIF:16097959
Dermatopolymyositis, unspecified (disorder)
Polymyositis Dermatomyositis[accessedResource: MSH:D003882][accessDate: 04-11-2010]
A subacute or chronic inflammatory disease of muscle and skin, marked by proximal muscle weakness and a characteristic skin rash. The illness occurs with approximately equal frequency in children and adults. The skin lesions usually take the form of a purplish rash (or less often an exfoliative dermatitis) involving the nose, cheeks, forehead, upper trunk, and arms. The disease is associated with a complement mediated intramuscular microangiopathy, leading to loss of capillaries, muscle ischemia, muscle-fiber necrosis, and perifascicular atrophy. The childhood form of this disease tends to evolve into a systemic vasculitis. Dermatomyositis may occur in association with malignant neoplasms. (From Adams et al., Principles of Neurology, 6th ed, pp1405-6)
[X]Dermatopolymyositis, unspecified
James Malone
Adult Type Dermatomyositis[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Dermatomyositides
Adult Type Dermatomyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Childhood Type Dermatomyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Dermatomyositis (disorder)[accessedResource: SNOMEDCT:396230008][accessDate: 04-11-2010]
dermatomyositis
SNOMEDCT:396230008
[X]Dermatopolymyositis, unspecified[accessedResource: SNOMEDCT:203795006][accessDate: 04-11-2010]
GeneRIF:15752564
DM - Dermatomyositis[accessedResource: SNOMEDCT:396230008][accessDate: 04-11-2010]
DOID:10223
Wagner-Unverricht syndrome[accessedResource: SNOMEDCT:396230008][accessDate: 04-11-2010]
Dermatomyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
[X]Dermatopolymyositis, unspecified (disorder)[accessedResource: SNOMEDCT:203795006][accessDate: 04-11-2010]
Dermatomyositides, Adult Type
Dermatomyositis, Childhood Type[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Dermatopolymyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
GeneRIF:12147628
GeneRIF:14631123
Dermatomyositides, Childhood Type
Dermatopolymyositis[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Dermatopolymyositis, unspecified (disorder)[accessedResource: DOID:10223][accessDate: 04-11-2010]
Dermatopolymyositides
GeneRIF:16047841
Polymyositis-Dermatomyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
SNOMEDCT:203795006
Polymyositis with skin involvement[accessedResource: DOID:10223][accessDate: 04-11-2010]
Adult Type Dermatomyositis
GeneRIF:15146429
Dermatopolymyositis
ICD9:710.3
NCIt:C26744
Dermatomyositis (disorder)
Dermatopolymyositis, unspecified[accessedResource: DOID:10223][accessDate: 04-11-2010]
Wagner-Unverricht syndrome
Childhood Type Dermatomyositis
James Malone
http://www.ebi.ac.uk/efo/EFO_0001620
A substance which lowers the surface tension of the medium in which it is dissolved, and/or the interfacial tension with other phases, and, accordingly, is positively adsorbed at the liquid/vapour and/or at other interfaces.
surfactant
surface active agent
surfactants
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#spectrophotometer[accessedResource: MO_716][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0002024
A spectrophotometer is an instrument that measures the intensity of light as a function of the color, or more specifically, the wavelength of light, transmitted by a substance.
spectrophotometer
MO_716
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#spectrophotometer
Rhodialothan
1,1,1-trifluoro-2-bromo-2-chloroethane
Narcotane
InChI=1/C2HBrClF3/c3-1(4)2(5,6)7/h1H
1,1,1-trifluoro-2-chloro-2-bromoethane
[H]C(Cl)(Br)C(F)(F)F
Fluothane
halothane
InChIKey=BCQZXOMGPXTTIC-UHFFFAOYAO
bromochlorotrifluoroethane
James Malone
A haloalkane that has formula C2HBrClF3.
Phthorothanum
http://www.ebi.ac.uk/efo/EFO_0001550
2-bromo-2-chloro-1,1,1-trifluoroethane
CHEBI:5615
C2HBrClF3
1-bromo-1-chloro-2,2,2-trifluoroethane
2,2,2-trifluoro-1-chloro-1-bromoethane
James Malone
2.8
Duplicate with colorectal adenocarcinoma EFO_0000365
obsolete_colorectal tumor
James Malone
true
milligram per kilogram
mg/kg
Tomasz Adamusiak
germ ring
ZFA:0000111
Tomasz Adamusiak
hindgut proper primordium
FBbt:00000441
Tomasz Adamusiak
ventral anterior lateral line ganglion
ZFA:0001313
1-4-dioxane
1,4-dioxane
123-91-1
20533
533
C4H8O2
Ele Holloway
James Malone
SUDHL10
protocol parameter
monocyte-derived osteoclast
Ele Holloway
James Malone
BC-3
An assay where chromatin immunoprecipitation (ChIP) is used in combination with microarray technology
ChIP-chip by array
Ele Holloway
James Malone
Tomasz Adamusiak
leptin
CASRN:169494-85-3
DSSTox_Generic_SID:39725
Tomasz Adamusiak
presumptive segmental plate
ZFA:0000053
James Malone
http://www.ebi.ac.uk/efo/EFO_0002642
The Crab-eating Macaque (Macaca fascicularis) is a primarily arboreal macaque native to Southeast Asia.
Macaca fascicularis
crab-eating macaque
long-tailed macaque
viability
Tomasz Adamusiak
DSSTox_Generic_SID:40620
STRUCTURE_Formula:C9H17Cl2N5O3
STRUCTURE_ChemicalName_IUPAC:(6R)-2-amino-6-[(1R,2S)-1,2-dihydroxypropyl]-5,6,7,8-tetrahydropteridin-4(1H)-one dihydrochloride
James Malone
Ele Holloway
tetrahydrobiopterin dihydrochloride
CASRN:69056-38-8
DSSTox_CID:20620
James Malone
http://www.ebi.ac.uk/efo/EFO_0001433
An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity.
true
A process is an entity that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity during the time it occurs.
process
all-cis-icosa-5,8,11,14,17-pentaenoic acid
(5Z,8Z,11Z,14Z,17Z)-icosa-5,8,11,14,17-pentaenoic acid
10417-94-4
21023
41023
C20H30O2
EPA; eicosapentaenoic acid
Ele Holloway
James Malone
SNU387
InChIKey=LUKBXSAWLPMMSZ-UHFFFAOYAJ
[H]C(=C([H])c1cc(O)cc(O)c1)c1ccc(O)cc1
CHEBI:27881
3,4',5-Trihydroxystilbene
InChI=1/C14H12O3/c15-12-5-3-10(4-6-12)1-2-11-7-13(16)9-14(17)8-11/h1-9,15-17H
http://www.ebi.ac.uk/efo/EFO_0002419
resveratrol
5-[2-(4-hydroxyphenyl)ethenyl]benzene-1,3-diol
Ele Holloway
A stilbenol that has formula C14H12O3.
C14H12O3
James Malone
Tomasz Adamusiak
semen
spermatozoon
male gamete[accessedResource: MAT:0000131][accessDate: 04-11-2010]
sperm cell
mature sperm cell
semen[accessedResource: MAT:0000131][accessDate: 04-11-2010]
MA:0002765
sperm
A mature, haploid male gamete.[accessedResource: FBbt:00004954][accessDate: 04-11-2010]
A mature, haploid male gamete.
spermatozoid[accessedResource: ZFA:0009006][accessDate: 04-11-2010]
MAT:0000131
A mature male germ cell that develops from a spermatid.
SAEL:93
spermatazoon[accessedResource: MAT:0000131][accessDate: 04-11-2010]
CL:0000019
spermatazoon
spermatozoid
sperm cell[accessedResource: CL:0000019][accessDate: 04-11-2010]
WBbt:0005321
male gamete
Definitive germ cell of the male sex.
spermatozoon[accessedResource: FBbt:00004954][accessDate: 04-11-2010]
ZFA:0009006
James Malone
FBbt:00004954
A mature male germ cell that develops from a spermatid.[accessedResource: ZFA:0009006][accessDate: 04-11-2010]
FMAID:67338
mature sperm cell[accessedResource: MAT:0000131][accessDate: 04-11-2010]
Ele Holloway
James Malone
CROAP5
CROAP-5
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#curator[accessedResource: MO_893][accessDate: 04-11-2010]
Tomasz Adamusiak
curator
MO_893
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#curator
Natural Language Generator 8th April 2010
James Malone
GM19240
A GM19240 is a cell line.
A GM19240 is all of the following: something that has as quality a female, something that derives from a Homo sapiens, and something that derives from a b cell.
Ele Holloway
James Malone
paraventricular nucleus
A precursor cell with a limited number of potential fates.[accessedResource: CL:0000055][accessDate: 04-11-2010]
non-terminally differentiated cell[accessedResource: CL:0000055][accessDate: 04-11-2010]
Tomasz Adamusiak
A precursor cell with a limited number of potential fates.
blast cell
CL:0000055
non-terminally differentiated cell
Tomasz Adamusiak
Cavitated compound organ which is comprised of gray and white matter and surrounds the cerebral ventricular system.[accessedResource: TAO:0000008][accessDate: 04-11-2010]
The central nervous system is that part of the nervous system that consists of the brain and spinal cord. The central nervous system (CNS) is one of the two major divisions of the nervous system. The other is the peripheral nervous system (PNS) which is outside the brain and spinal cord.
TADS:0000188
Nervous System, Brain[accessedResource: NCIt:C12439][accessDate: 04-11-2010]
SAEL:12
EHDAA:2641
adult brain[accessedResource: FBbt:00003624][accessDate: 04-11-2010]
brain structure
Nervous System, Brain
James Malone
BTO:0000227
Segment of neuraxis that has as its parts gray matter and white matter that surround the cerebral ventricular system; Examples: There is only one brain.
CNS
FBbt:00003624
central nervous system[accessedResource: BTO:0000227][accessDate: 04-11-2010]
synganglion
central nervous system
brain
MAT:0000098
NCIt:C12439
CNS[accessedResource: BTO:0000227][accessDate: 04-11-2010]
The part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube.
* Subdivision of neuraxis that consists of neural tissue (which is organized into gray matter and white matter) and the cerebral ventricular system (cavity of organ part); it is embryologically derived from the rostral part of the neural tube; together with the spinal cord, the brain constitutes the organ neuraxis. Examples: There is only one brain. (UWDA) * That part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube. Functions include muscle control and coordination, sensory reception and integration, speech production, memory storage, and the elaboration of thought and emotions. (NCI) * The part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube. (MSH) * portion of the vertebrate central nervous system that is enclosed within the cranium, continuous with the spinal cord, and composed of gray matter and white matter; the primary center for the regulation and control of bodily activities, receiving and interpreting sensory impulses, and transmitting information to the muscles and body organs; also the seat of consciousness, thought, memory, and emotion; includes the functionally similar portion of the invertebrate nervous system. (CSP)[accessedResource: NIFSTD:birnlex_796][accessDate: 04-11-2010]
TAO:0000008
An organ composed of grey and white matter containing billions of neurons that is the center for intelligence and reasoning. It is protected by the bony cranium.[accessedResource: NCIt:C12439][accessDate: 04-11-2010]
An organ composed of grey and white matter containing billions of neurons that is the center for intelligence and reasoning. It is protected by the bony cranium.
The part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube.
* Subdivision of neuraxis that consists of neural tissue (which is organized into gray matter and white matter) and the cerebral ventricular system (cavity of organ part); it is embryologically derived from the rostral part of the neural tube; together with the spinal cord, the brain constitutes the organ neuraxis. Examples: There is only one brain. (UWDA) * That part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube. Functions include muscle control and coordination, sensory reception and integration, speech production, memory storage, and the elaboration of thought and emotions. (NCI) * The part of the central nervous system contained within the cranium, comprising the prosencephalon, mesencephalon, and rhombencephalon. It is derived from the anterior part of the embryonic neural tube. (MSH) * portion of the vertebrate central nervous system that is enclosed within the cranium, continuous with the spinal cord, and composed of gray matter and white matter; the primary center for the regulation and control of bodily activities, receiving and interpreting sensory impulses, and transmitting information to the muscles and body organs; also the seat of consciousness, thought, memory, and emotion; includes the functionally similar portion of the invertebrate nervous system. (CSP)
MA:0000168
adult brain
synganglion[accessedResource: MAT:0000098][accessDate: 04-11-2010]
The central nervous system is that part of the nervous system that consists of the brain and spinal cord. The central nervous system (CNS) is one of the two major divisions of the nervous system. The other is the peripheral nervous system (PNS) which is outside the brain and spinal cord.[accessedResource: BTO:0000227][accessDate: 04-11-2010]
MFO:0002240
brain structure[accessedResource: ZFA:0000008][accessDate: 04-11-2010]
EV:0100164
ZFA:0000008
FMAID:50801
NIFSTD:birnlex_796
Cavitated compound organ which is comprised of gray and white matter and surrounds the cerebral ventricular system.
WBbt:0005440
Helen Parkinson
A protein array is an array which provides a multiplex approach to identify protein-protein interactions, to identify the substrates of protein kinases, to identify transcription factor protein-activation, or to identify the targets of biologically active small molecules. The array is a substrate (e.g. glass) on which different molecules of protein or specific DNA binding sequences (as capture probes for the proteins) have been affixed at separate locations in an ordered manner thus forming a microscopic array. The most common protein microarray is the antibody microarray, where antibodies are spotted onto the protein chip and are used as capture molecules to detect proteins from cell lysate solutions.
protein array
http://en.wikipedia.org/wiki/Protein_microarray
protein binding array
[M]Idiopathic thrombocythemia
Idiopathic thrombocythemia (disorder)[accessedResource: DOID:2224][accessDate: 04-11-2010]
Essential Thrombocythemias
GeneRIF:11891801
Essential thrombocythemia (clinical)
DOID:2224
GeneRIF:12010817
Essential thrombocythaemia
Essential thrombocytosis (disorder)[accessedResource: DOID:2224][accessDate: 04-11-2010]
Essential thrombocythaemia (clinical disorder)[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
Hemorrhagic Thrombocythemia
[M]Idiopathic thrombocythemia[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
Thrombocythemia, Primary[accessedResource: MSH:D013920][accessDate: 04-11-2010]
GeneRIF:14966468
Thrombocythemias, Idiopathic[accessedResource: MSH:D013920][accessDate: 04-11-2010]
Thrombocythemias, Primary
idiopathic thrombocythemia[accessedResource: DOID:2224][accessDate: 04-11-2010]
James Malone
Idiopathic thrombocythaemia[accessedResource: DOID:2224][accessDate: 04-11-2010]
A chronic myeloproliferative disorder that involves primarily the megakaryocytic lineage. It is characterized by sustained thrombocytosis in the blood, increased numbers of large, mature megakaryocytes in the bone marrow, and episodes of thrombosis and/or hemorrhage. The cause is unknown. Median survival times of 10-15 years are commonly reported. (WHO, 2001)
Thrombocythemias, Primary[accessedResource: MSH:D013920][accessDate: 04-11-2010]
A chronic myeloproliferative neoplasm that involves primarily the megakaryocytic lineage. It is characterized by sustained thrombocytosis in the blood, increased numbers of large, mature megakaryocytes in the bone marrow, and episodes of thrombosis and/or hemorrhage. The cause is unknown. Median survival times of 10-15 years are commonly reported. (WHO, 2008)
Essential haemorrhagic thrombocythaemia[accessedResource: SNOMEDCT:128844009][accessDate: 04-11-2010]
Idiopathic thrombocythemia (disorder)
Essential thrombocythemia (morphologic abnormality)[accessedResource: SNOMEDCT:128844009][accessDate: 04-11-2010]
Thrombocythemia, Hemorrhagic[accessedResource: MSH:D013920][accessDate: 04-11-2010]
A clinical syndrome characterized by repeated spontaneous hemorrhages and a remarkable increase in the number of circulating platelets.
Idiopathic thrombocythaemia
SNOMEDCT:109994006
Hemorrhagic Thrombocythemias
Essential thrombocythaemia (disorder)
A chronic myeloproliferative and megakaryocytic tumor and thrombocytosis that is a rare chronic disorder that results_in the overproduction of platelets.
primary Thrombocytosis[accessedResource: DOID:2224][accessDate: 04-11-2010]
Essential thrombocytosis (disorder)
GeneRIF:12221665
GeneRIF:12756017
idiopathic thrombocythemia
GeneRIF:14764528
A chronic myeloproliferative neoplasm that involves primarily the megakaryocytic lineage. It is characterized by sustained thrombocytosis in the blood, increased numbers of large, mature megakaryocytes in the bone marrow, and episodes of thrombosis and/or hemorrhage. The cause is unknown. Median survival times of 10-15 years are commonly reported. (WHO, 2008)[accessedResource: NCIt:C3407][accessDate: 04-11-2010]
Essential Thrombocytemia[accessedResource: NCIt:C3407][accessDate: 04-11-2010]
GeneRIF:12091373
Essential thrombocythaemia (clinical disorder)
GeneRIF:12377969
Essential thrombocythemia (clinical)[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
Essential thrombocythemia (clinical disorder)[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
Essential thrombocythemia (disorder)
GeneRIF:11860444
Essential thrombocythaemia (clinical)
MSH:D013920
Essential thrombocythemia (disorder)[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
Essential Thrombocytosis
Essential thrombocythaemia (disorder)[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
[M]Idiopathic thrombocythaemia
Essential thrombocytosis[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
Essential (hemorrhagic) thrombocythemia
Idiopathic hemorrhagic thrombocythemia
Essential thrombocythaemia[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
NCIt:C3407
A clinical syndrome characterized by repeated spontaneous hemorrhages and a remarkable increase in the number of circulating platelets.[accessedResource: MSH:D013920][accessDate: 04-11-2010]
A chronic myeloproliferative and megakaryocytic tumor and thrombocytosis that is a rare chronic disorder that results_in the overproduction of platelets.[accessedResource: DOID:2224][accessDate: 04-11-2010]
Essential Thrombocytemia
Essential thrombocythaemia (clinical)[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
Idiopathic hemorrhagic thrombocythemia[accessedResource: SNOMEDCT:128844009][accessDate: 04-11-2010]
SNOMEDCT:128844009
Thrombocythemia, Primary
essential thrombocythemia
Hemorrhagic Thrombocythemias[accessedResource: MSH:D013920][accessDate: 04-11-2010]
Essential thrombocythemia (clinical disorder)
Essential haemorrhagic thrombocythaemia
Idiopathic haemorrhagic thrombocythaemia[accessedResource: SNOMEDCT:128844009][accessDate: 04-11-2010]
Primary Thrombocytosis
Essential thrombocythemia (morphologic abnormality)
GeneRIF:15837627
Idiopathic haemorrhagic thrombocythaemia
Thrombocythemias, Idiopathic
[M]Idiopathic thrombocythaemia[accessedResource: SNOMEDCT:109994006][accessDate: 04-11-2010]
Thrombocythemias, Essential[accessedResource: MSH:D013920][accessDate: 04-11-2010]
Essential hemorrhagic thrombocythemia[accessedResource: SNOMEDCT:128844009][accessDate: 04-11-2010]
CHEBI:50276
James Malone
http://www.ebi.ac.uk/efo/EFO_0001886
An inhibitor of bacterial enzymes of the DNA topoisomerases, Type I class that catalyze ATP-independent breakage of one of the two strands of DNA, passage of the unbroken strand through the break, and rejoining of the broken strand. These bacterial enzymes reduce the topological stress in the DNA structure by relaxing negatively, but not positively, supercoiled DNA.
topoisomerase I inhibitor
topoisomerase I inhibitors
true
A dimensionless concentration unit which denotes the mass of a substance in a mixture as a percentage of the mass of the entire mixture.
mass percent
mass percentage
w/w
weight-weight percentage
CHEBI:23366
James Malone
http://www.ebi.ac.uk/efo/EFO_0001820
compatible osmolytes
Ele Holloway
James Malone
NCI-H82
James Malone
MAT:0000207
Any of a number of aggregations of neurons, glial cells and their processes, and surrounded by a glial cell and connective tissue sheath (plural: ganglia).
Any of a number of aggregations of neurons, glial cells and their processes, surrounded by a glial cell and connective tissue sheath (plural: ganglia).
ganglion
Any of a number of aggregations of neurons, glial cells and their processes, and surrounded by a glial cell and connective tissue sheath (plural: ganglia).[accessedResource: FBbt:00005137][accessDate: 04-11-2010]
ganglion[accessedResource: FBbt:00005137][accessDate: 04-11-2010]
FBbt:00005137
invertebrate ganglion
calcium(2+)
14127-61-8
17638
37638
Ca
calcium
calcium ion
CHEBI:38637
James Malone
http://www.ebi.ac.uk/efo/EFO_0001870
tyrosine kinase inhibitor
protein tyrosine kinase inhibitor
tyrosine kinase inhibitors
Cardiac Ventricles[accessedResource: NCIt:C12730][accessDate: 04-11-2010]
NCIt:C12730
BTO:0000862
ZFA:0000009
Tomasz Adamusiak
MAT:0000497
FMAID:82553
Cavitated compound organ that receives blood flow from the atrium and delivers blood to the body via the aorta. Valves are present to direct flow. There are only two chambers present in the fish heart.[accessedResource: ZFA:0000009][accessDate: 04-11-2010]
Cardiac Ventricles
cardiac ventricle
heart ventricle[accessedResource: BTO:0000862][accessDate: 04-11-2010]
A chamber of the heart which receives blood from a corresponding atrium and from which blood is forced into the arteries.[accessedResource: BTO:0000862][accessDate: 04-11-2010]
EMAPA:17331
One of four heart chambers.
MA:0000091
The lower right and left chambers of the heart. The right pumps venous blood into the lungs and the left pumps oxygenated blood into the systemic arterial circulation. (MeSH)[accessedResource: NCIt:C12730][accessDate: 04-11-2010]
Ventricles, Heart
Cavitated compound organ that receives blood flow from the atrium and delivers blood to the body via the aorta. Valves are present to direct flow. There are only two chambers present in the fish heart.
One of four heart chambers.[accessedResource: TAO:0000009][accessDate: 04-11-2010]
A chamber of the heart which receives blood from a corresponding atrium and from which blood is forced into the arteries.
EV:0100020
ventricle
EHDAA:1900
TAO:0000009
Ventricle[accessedResource: FMAID:82553][accessDate: 04-11-2010]
MFO:0080920
Ventricles, Heart[accessedResource: NCIt:C12730][accessDate: 04-11-2010]
The lower right and left chambers of the heart. The right pumps venous blood into the lungs and the left pumps oxygenated blood into the systemic arterial circulation. (MeSH)
heart ventricle
General anatomical term which refers to a chamber of an organ with cavitated organ parts. Examples: right ventricle of heart, lateral ventricle of brain.
James Malone
http://www.ebi.ac.uk/efo/EFO_0001440
A realizable entity [snap:RealizableEntity] the manifestation of which brings about some result or end that is not essential to a continuant [snap:Continuant] in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant [snap:Continuant] in some kinds of natural, social or institutional contexts.
For example, the role of a person as a surgeon, the role of an artificial heart in pumping blood, the role of a chemical compound in an experiment, the role of a drug in the treatment of a disease.
true
A role is an entity which is borne in a material entity in some kinds of natural, social or institutional contexts, but which is not essential to the fundamental definition of that material entity (i.e. the material entity exists with or without the role). For example, the role of a person as a surgeon, the role of an artificial heart in pumping blood, the role of a chemical compound in an experiment, the role of a drug in the treatment of a disease.
role
MAT:0000299
Connective tissue that forms the skeletal components of the body.
James Malone
osseous tissue
Osseous
Bones[accessedResource: NCIt:C12366][accessDate: 04-11-2010]
SAEL:10
XAO:0000169
Portion of tissue which is calcified connective tissue making up the structural elements of the skeletal system.
Bones
FMAID:30317
NCIt:C12366
bone
EV:0100140
Connective tissue that forms the skeletal components of the body.[accessedResource: NCIt:C12366][accessDate: 04-11-2010]
The hard form of connective tissue that constitutes the majority of the skeleton of most vertebrates; it consists of an organic component (the cells and matrix) and an inorganic, or mineral, component; the matrix contains a framework of collagenous fibers and is impregnated with the mineral component, chiefly calcium phosphate (85 per cent) and calcium carbonate (10 per cent), which imparts the quality of rigidity to bone.
Portion of tissue which is calcified connective tissue making up the structural elements of the skeletal system.[accessedResource: TAO:0001514][accessDate: 04-11-2010]
Osseous[accessedResource: NCIt:C12366][accessDate: 04-11-2010]
osseous tissue[accessedResource: BTO:0000140][accessDate: 04-11-2010]
The hard form of connective tissue that constitutes the majority of the skeleton of most vertebrates; it consists of an organic component (the cells and matrix) and an inorganic, or mineral, component; the matrix contains a framework of collagenous fibers and is impregnated with the mineral component, chiefly calcium phosphate (85 per cent) and calcium carbonate (10 per cent), which imparts the quality of rigidity to bone.[accessedResource: BTO:0000140][accessDate: 04-11-2010]
BTO:0000140
TAO:0001514
MAT:0000402
young adult[accessedResource: MAT:0000402][accessDate: 04-11-2010]
young adult
EV:0300051
child
juvenile stage
child[accessedResource: MAT:0000402][accessDate: 04-11-2010]
James Malone
XAO:1000010
An adenocarcinoma arising from the colon. It is more frequently seen in populations with a Western type diet and in patients with a history of chronic inflammatory bowel disease. Signs and symptoms include intestinal bleeding, anemia, and change in bowel habits. According to the degree of cellular differentiation, colonic adenocarcinomas are divided into well differentiated, moderately, and poorly differentiated. Morphologic variants include the mucinous adenocarcinoma and signet-ring adenocarcinoma. Lymphatic or hematogenous spread can occur early in the process and lead to systemic disease.[accessedResource: NCIt:C4349][accessDate: 10-05-2010]
Use http://www.ebi.ac.uk/efo/EFO_0000365 colorectal adenocarcinoma
GeneRIF:12383707
GeneRIF:12878221
GeneRIF:14666619
GeneRIF:15894926
GeneRIF:15161648
GeneRIF:12918105
GeneRIF:15069532
adenocarcinoma of colon[accessedResource: DOID:234][accessDate: 10-05-2010]
James Malone
Colonic adenocarcinoma[accessedResource: DOID:234][accessDate: 10-05-2010]
An adenocarcinoma arising from the colon. It is more frequently seen in populations with a Western type diet and in patients with a history of chronic inflammatory bowel disease. Signs and symptoms include intestinal bleeding, anemia, and change in bowel habits. According to the degree of cellular differentiation, colonic adenocarcinomas are divided into well differentiated, moderately, and poorly differentiated. Morphologic variants include the mucinous adenocarcinoma and signet-ring adenocarcinoma. Lymphatic or hematogenous spread can occur early in the process and lead to systemic disease.
true
obsolete_colon adenocarcinoma
GeneRIF:12019353
GeneRIF:15526283
adenocarcinoma of the colon[accessedResource: DOID:234][accessDate: 10-05-2010]
GeneRIF:11731423
2.6.1
NCIt:C4349
GeneRIF:15865210
Colonic Adenocarcinoma
GeneRIF:15546874
GeneRIF:15517914
adenocarcinoma of the colon
adenocarcinoma of colon
DOID:234
teratospermia[accessedResource: MP:0005578][accessDate: 04-11-2010]
presence of structurally anomalous spermatozoa in the semen; malformations include the physical bending of the sperm to produce kinks or bends[accessedResource: MP:0005578][accessDate: 04-11-2010]
teratozoospermia
Ele Holloway
teratospermia
Tomasz Adamusiak
MP:0005578
presence of structurally anomalous spermatozoa in the semen; malformations include the physical bending of the sperm to produce kinks or bends
Non-striated, elongated, spindle-shaped cells found lining the digestive tract, uterus, and blood vessels. They are derived from specialized myoblasts (myoblasts, smooth muscle) (MSH).[accessedResource: NIFSTD:sao676858164][accessDate: 04-11-2010]
A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast).
non-striated muscle cell
non-striated muscle cell[accessedResource: NIFSTD:sao676858164][accessDate: 04-11-2010]
A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast).[accessedResource: CL:0000192][accessDate: 04-11-2010]
Tomasz Adamusiak
Non-striated, elongated, spindle-shaped cells found lining the digestive tract, uterus, and blood vessels. They are derived from specialized myoblasts (myoblasts, smooth muscle) (MSH).
CL:0000192
NIFSTD:sao676858164
smooth muscle fiber[accessedResource: CL:0000192][accessDate: 04-11-2010]
James Malone
smooth muscle cell
smooth muscle fiber
James Malone
mesenchymal stem cell
NCIt:C43423
conditioned mesenchymal stem cell
James Malone
http://www.ebi.ac.uk/efo/EFO_0001665
benzenetriols
CHEBI:22707
benzenetriol
Ele Holloway
James Malone
NCI-H2170
http://www.ebi.ac.uk/efo/EFO_0001497
cadmium compounds
CHEBI:22978
cadmium molecular entities
cadmium molecular entity
A carbotricyclic compound that has formula C22H25NO6.
CHEBI:23359
colchicine
N-(1,2,3,10-tetramethoxy-9-oxo-5,6,7,9-tetrahydrobenzo[a]heptalen-7-yl)acetamide
http://www.ebi.ac.uk/efo/EFO_0001512
COC1=CC=C2C(=CC1=O)C(CCc3cc(OC)c(OC)c(OC)c23)NC(C)=O
InChI=1/C22H25NO6/c1-12(24)23-16-8-6-13-10-19(27-3)21(28-4)22(29-5)20(13)14-7-9-18(26-2)17(25)11-15(14)16/h7,9-11,16H,6,8H2,1-5H3,(H,23,24)/f/h23H
C22H25NO6
InChIKey=IAKHMKGGTNLKSZ-MPIMZMORCX
Tomasz Adamusiak
nucleus of the medial longitudinal fasciculus medulla oblongata
ZFA:0000815
James Malone
A 2alpha-hydroxy steroid that has formula C28H48O6.
(22R,23R)-2alpha,3alpha,22,23-tetrahydroxy-6,7-seco-5alpha-campestano-6,7-lactone
C28H48O6
Ele Holloway
CHEBI:28277
InChIKey=IXVMHGVQKLDRKH-KNBKMWSGBW
A brassinosteroid that has formula C28H48O6.
InChI=1/C28H48O6/c1-14(2)15(3)24(31)25(32)16(4)18-7-8-19-17-13-34-26(33)21-11-22(29)23(30)12-28(21,6)20(17)9-10-27(18,19)5/h14-25,29-32H,7-13H2,1-6H3/t15-,16-,17-,18+,19-,20-,21+,22-,23+,24+,25+,27+,28+/m0/s1
(22R,23R)-2alpha,3alpha,22,23-tetrahydroxy-7a-homo-7-oxa-5alpha-campestan-6-one
brassinolide
[H][C@@]1(CC[C@@]2([H])[C@]3([H])COC(=O)[C@@]4([H])C[C@H](O)[C@H](O)C[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)[C@@H](O)[C@H](O)[C@@H](C)C(C)C
http://www.ebi.ac.uk/efo/EFO_0002401
Ele Holloway
James Malone
JAR
Jie Zheng
Tomasz Adamusiak
Theiler stage 22
birnlex_7077
Sjogren's disease[accessedResource: DOID:12894][accessDate: 04-11-2010]
Sjgren's syndrome (disorder)[accessedResource: DOID:12894][accessDate: 04-11-2010]
Sjögren syndrome[accessedResource: SNOMEDCT:83901003][accessDate: 04-11-2010]
SNOMEDCT:83901003
xerodermosteosis
Sjogren's syndrome[accessedResource: SNOMEDCT:83901003][accessDate: 04-11-2010]
Sjogren syndrome
Sjogren's syndrome (disorder)[accessedResource: SNOMEDCT:83901003][accessDate: 04-11-2010]
Sjögren's syndrome[accessedResource: SNOMEDCT:83901003][accessDate: 04-11-2010]
MSH:D012859
Chronic inflammatory and autoimmune disease in which the salivary and lacrimal glands undergo progressive destruction by lymphocytes and plasma cells resulting in decreased production of saliva and tears. The primary form, often called sicca syndrome, involves both KERATOCONJUNCTIVITIS SICCA and XEROSTOMIA. The secondary form includes, in addition, the presence of a connective tissue disease, usually rheumatoid arthritis.
Mikulicz disease
James Malone
An autoimmune disorder affecting the salivary and lacrimal glands. Morphologically, it is characterized by the presence of lymphocytic and plasmacytic infiltrates which cause destruction of these glands. It results in dry mouth and dry eyes. It may be associated with the presence of other autoimmune disorders, including rheumatoid arthritis and lupus erythematosus.[accessedResource: NCIt:C26883][accessDate: 04-11-2010]
Sjogren's syndrome (disorder)
Sjogrens Syndrome
Syndrome, Sjogren's
Sjögren syndrome
An autoimmune disorder affecting the salivary and lacrimal glands. Morphologically, it is characterized by the presence of lymphocytic and plasmacytic infiltrates which cause destruction of these glands. It results in dry mouth and dry eyes. It may be associated with the presence of other autoimmune disorders, including rheumatoid arthritis and lupus erythematosus.
Sicca syndrome (disorder)
Sjögren's syndrome (disorder)[accessedResource: SNOMEDCT:83901003][accessDate: 04-11-2010]
NCIt:C26883
Chronic inflammatory and autoimmune disease in which the salivary and lacrimal glands undergo progressive destruction by lymphocytes and plasma cells resulting in decreased production of saliva and tears. The primary form, often called sicca syndrome, involves both KERATOCONJUNCTIVITIS SICCA and XEROSTOMIA. The secondary form includes, in addition, the presence of a connective tissue disease, usually rheumatoid arthritis.[accessedResource: MSH:D012859][accessDate: 04-11-2010]
Sicca (Sjogren's) syndrome[accessedResource: DOID:12894][accessDate: 04-11-2010]
Sjögren's disease[accessedResource: SNOMEDCT:83901003][accessDate: 04-11-2010]
Sicca (Sjogren's) syndrome
Sicca syndrome (disorder)[accessedResource: DOID:12894][accessDate: 04-11-2010]
Sicca syndrome
DOID:12894
Sjogrens Syndrome[accessedResource: MSH:D012859][accessDate: 04-11-2010]
Sjgren's syndrome (disorder)
xerodermosteosis[accessedResource: DOID:12894][accessDate: 04-11-2010]
Sicca syndrome[accessedResource: SNOMEDCT:83901003][accessDate: 04-11-2010]
Sjögren's syndrome
Sjögren's disease
Sjogren's disease
Sjögren's syndrome (disorder)
ClyP2[accessedResource: FBbt:00005538][accessDate: 04-11-2010]
James Malone
clypeo-labral primordium
FBbt:00005538
ClyP2
2.2
JM
Ele Holloway
Duplicate with EFO_0002796
JURKAT cell
true
Human T cell leukemia, established from the peripheral blood of a 14-year-old boy with acute lymphoblastic leukemia (ALL) at first relapse in 1976; often this cell line is called "JM (JURKAT and JM are derived from the same patient and are sister clones), occasionally JM may be a subclone with somewhat divergent features.[accessedResource: BTO:0000661][accessDate: 10-05-2010]
Human T cell leukemia, established from the peripheral blood of a 14-year-old boy with acute lymphoblastic leukemia (ALL) at first relapse in 1976; often this cell line is called "JM (JURKAT and JM are derived from the same patient and are sister clones), occasionally JM may be a subclone with somewhat divergent features.
BTO:0000661
JM cell
James Malone
obsolete_Jurkat
JURKAT cell[accessedResource: BTO:0000661][accessDate: 10-05-2010]
JM cell[accessedResource: BTO:0000661][accessDate: 10-05-2010]
Any of the colorless weakly motile cells originating from stem cells and differentiating in lymphoid tissue (as of the thymus or bone marrow) that are the typical cellular elements of lymph, include the cellular mediators of immunity, and constitute 20 to 30 percent of the white blood cells of normal human blood.
lymphocyte
A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin.
A cell of the B cell, T cell, or natural killer cell lineage.
CL:0000542
A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin.[accessedResource: CL:0000542][accessDate: 04-11-2010]
BTO:0000775
James Malone
Any of the colorless weakly motile cells originating from stem cells and differentiating in lymphoid tissue (as of the thymus or bone marrow) that are the typical cellular elements of lymph, include the cellular mediators of immunity, and constitute 20 to 30 percent of the white blood cells of normal human blood.[accessedResource: BTO:0000775][accessDate: 04-11-2010]
CHEBI:16411
C10H9NO2
2-(indol-3-yl)ethanoic acid
A member of the indole-3-acetic acids that has formula C10H9NO2.
heteroauxin
InChIKey=SEOVTRFCIGRIMH-XWKXFZRBCL
3-Indolylessigsaeure
IES
InChI=1/C10H9NO2/c12-10(13)5-7-6-11-9-4-2-1-3-8(7)9/h1-4,6,11H,5H2,(H,12,13)/f/h12H
IAA
http://www.ebi.ac.uk/efo/EFO_0001556
An indole-3-acetic acid that has formula C10H9NO2.
(indol-3-yl)acetic acid
OC(=O)Cc1c[nH]c2ccccc12
indole-3-acetic acid
Indoleacetic acid
1H-indol-3-ylacetic acid
James Malone
James Malone
time to development of distant metastases
CEMC1
James Malone
Ele Holloway
James Malone
Caco-2
James Malone
Tomasz Adamusiak
polycythemia vera
James Malone
bronchial epithelium
BTO:0001845
NCIt:C32231
Tomasz Adamusiak
ventricular myocardium
UBERON:0001083
Memory Impairment Adverse Event[accessedResource: NCIt:C55427][accessDate: 04-11-2010]
James Malone
memory impairment
NCIt:C55427
Memory Impairment Adverse Event
James Malone
http://www.ebi.ac.uk/efo/EFO_0002643
The Rhesus Macaque (Macaca mulatta), often called the Rhesus Monkey, is one of the best known species of Old World monkeys.
Macaca mulatta
http://en.wikipedia.org/wiki/Rhesus_Macaque
Rhesus Macaque
Ele Holloway
James Malone
SKMEL5
Multidisciplinary study done at the population level or among the population groups, generally to find the cause, incidence or spread of the disease or to see the response to the treatment, nutrition or environment.[accessedResource: NCIt:C15716][accessDate: 04-11-2010]
Population Study
Population Study[accessedResource: NCIt:C15716][accessDate: 04-11-2010]
NCIt:C15716
Tomasz Adamusiak
Multidisciplinary study done at the population level or among the population groups, generally to find the cause, incidence or spread of the disease or to see the response to the treatment, nutrition or environment.
James Malone
population based study
A group of mostly autosomal recessive inherited neurodegenerative disorders characterized by accumulation of lipofuscin in the neuronal cells and in other tissues including liver, spleen, kidneys, and myocardium. Signs and symptoms include motor disturbances and cognitive decline.[accessedResource: NCIt:C61257][accessDate: 04-11-2010]
Tomasz Adamusiak
A group of mostly autosomal recessive inherited neurodegenerative disorders characterized by accumulation of lipofuscin in the neuronal cells and in other tissues including liver, spleen, kidneys, and myocardium. Signs and symptoms include motor disturbances and cognitive decline.
neuronal ceroid lipofuscinosis
NCIt:C61257
DSSTox_Generic_SID:42567
CASRN:150145-89-4
(S)-MCPG
DSSTox_CID:22567
Tomasz Adamusiak
(S)-a-methyl-4-carboxyphenylglycine
Ele Holloway
STRUCTURE_Formula:C10H11NO4
James Malone
STRUCTURE_ChemicalName_IUPAC:4-[(1S)-1-amino-1-carboxyethyl]benzoic acid
James Malone
CS57570 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158594&type=germplasm
CS57570
http://www.arabidopsis.org/servlets/TairObject?id=1005158594&type=germplasm
James Malone
972h- is a yeast strain as described in article PMID 12753
972h-
PMID: 12753
James Malone
HCC1159
Tomasz Adamusiak
embryonic inner optic lobe primordium
FBbt:00000461
James Malone
Tomasz Adamusiak
lung apical
Apical is a geometric modifier describing the tip of a pyramidal or rounded structure. For example, lung apical.
apical
MAT:0000484
NIFSTD:sao1703115805
Ele Holloway
James Malone
NCI-H2126
Ele Holloway
James Malone
suprachiasmatic nucleus
Tomasz Adamusiak
small intestine primordium
FBbt:00005504
urocortin I
Ele Holloway
James Malone
RERF-LC-KJ
JCRB0137
The most common type of liposarcoma. It is composed of round to oval mesenchymal cells, small signet ring lipoblasts, and a rich network of capillaries in a myxoid stroma.
Tomasz Adamusiak
A liposarcoma containing myxomatous tissue. (Dorland, 27th ed)[accessedResource: MSH:D018208][accessDate: 04-11-2010]
A liposarcoma containing myxomatous tissue. (Dorland, 27th ed)
Myxoid liposarcoma (disorder)[accessedResource: SNOMEDCT:404069006][accessDate: 04-11-2010]
DOID:5363
Myxoid liposarcoma (disorder)
Liposarcomas, Myxoid[accessedResource: MSH:D018208][accessDate: 04-11-2010]
Myxoliposarcoma[accessedResource: SNOMEDCT:27849002][accessDate: 04-11-2010]
Myxoid liposarcoma (morphologic abnormality)
SNOMEDCT:404069006
SNOMEDCT:27849002
MSH:D018208
Myxoid liposarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:27849002][accessDate: 04-11-2010]
Myxoliposarcoma
myxoid liposarcoma
The most common type of liposarcoma. It is composed of round to oval mesenchymal cells, small signet ring lipoblasts, and a rich network of capillaries in a myxoid stroma.[accessedResource: NCIt:C3735][accessDate: 04-11-2010]
GeneRIF:12915480
NCIt:C3735
Myxoid Liposarcomas
James Malone
Tomasz Adamusiak
Wistar
NIFSTD:birnlex_320
RGD:10044
phorbol 13-acetate 12-myristate
12-O-Tetradecanoylphorbol 13-acetate
A phorbol ester that has formula C36H56O8.
http://www.ebi.ac.uk/efo/EFO_0002493
12-Tetradecanoylphorbol 13-acetate
phorbol 12-tetradecanoate 13-acetate
(1aR,1bS,4aR,7aS,7bS,8R,9R,9aS)-9a-acetoxy-4a,7b-dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1a,1b,4,4a,5,7a,7b,8,9,9a-decahydro-1H-cyclopropa[3,4]benzo[1,2-e]azulen-9-yl tetradecanoate
PMA
[H][C@@]12C=C(CO)C[C@]3(O)C(=O)C(C)=C[C@@]3([H])[C@@]1(O)[C@H](C)[C@@H](OC(=O)CCCCCCCCCCCCC)[C@]1(OC(C)=O)[C@@]2([H])C1(C)C
InChIKey=PHEDXBVPIONUQT-RGYGYFBIBK
C36H56O8
James Malone
tetradecanoylphorbol acetate
InChI=1/C36H56O8/c1-7-8-9-10-11-12-13-14-15-16-17-18-29(39)43-32-24(3)35(42)27(30-33(5,6)36(30,32)44-25(4)38)20-26(22-37)21-34(41)28(35)19-23(2)31(34)40/h19-20,24,27-28,30,32,37,41-42H,7-18,21-22H2,1-6H3/t24-,27+,28-,30-,32-,34-,35-,36-/m1/s1
CHEBI:37537
Ele Holloway
RWPE1
James Malone
Ele Holloway
Ele Holloway
James Malone
TT3E
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#stimulus_or_stress_design[accessedResource: MO_568][accessDate: 04-11-2010]
Tomasz Adamusiak
stimulus or stress design
MO_568
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#stimulus_or_stress_design
Tomasz Adamusiak
rhombomere 2
ZFA:0000822
FMA:62211
Medial geniculate complex
Medial geniculate nuclei
Medial geniculate body
Medial geniculate body[accessedResource: FMA:62211][accessDate: 10-05-2010]
true
Medial geniculate complex[accessedResource: FMA:62211][accessDate: 10-05-2010]
obsolete_medial geniculate nucleus
Duplication: use class EFO_0001968
Medial geniculate nucleus
Medial geniculate nucleus[accessedResource: FMA:62211][accessDate: 10-05-2010]
James Malone
Medial geniculate nuclei[accessedResource: FMA:62211][accessDate: 10-05-2010]
1.6
MO_179
Jie Zheng
VolumeUnitOther
Tomasz Adamusiak
James Malone
A derived unit which is a standard measure of the amount of space occupied by any substance, whether solid, liquid, or gas.
http://www.ebi.ac.uk/efo/EFO_0001711
true
A volume unit is a derived unit which is a standard measure of the amount of space occupied by any substance, whether solid, liquid, or gas.
VolumeUnit[accessedResource: MO_179][accessDate: 04-11-2010]
volume unit
MO_155
VolumeUnitOther[accessedResource: MO_155][accessDate: 04-11-2010]
VolumeUnit
TADS:0000321
A fat body is an insect gland dorsal to the insect gut, with a function analogous to that of the vertebrate liver. It is a storage organ for fats, glycogen and protein and is a major site of intermediary metabolism.
An invertebrate tissue which serves as a store of lipids and in nwhich a great deal of catabolic and anabolic activity occurs
TGMA:0001856
James Malone
MAT:0000096
fat body
fat body sensu invertebrata
An invertebrate tissue which serves as a store of lipids and in nwhich a great deal of catabolic and anabolic activity occurs[accessedResource: MAT:0000096][accessDate: 04-11-2010]
.
.[accessedResource: FBbt:00005066][accessDate: 04-11-2010]
A fat body is an insect gland dorsal to the insect gut, with a function analogous to that of the vertebrate liver. It is a storage organ for fats, glycogen and protein and is a major site of intermediary metabolism.[accessedResource: TGMA:0001856][accessDate: 04-11-2010]
FBbt:00005066
fat body[accessedResource: TGMA:0001856][accessDate: 04-11-2010]
Tomasz Adamusiak
rhombomere 7
ZFA:0000949
ICD9:030.0
Leprosies, Nodular[accessedResource: MSH:D015440][accessDate: 04-11-2010]
Lepromatous leprosy (disorder)[accessedResource: SNOMEDCT:21560005][accessDate: 04-11-2010]
Leprosies, Cutaneous
SNOMEDCT:21560005
James Malone
Lepromatous leprosy [type L]
A chronic communicable infection which is a principal or polar form of LEPROSY. This disorder is caused by MYCOBACTERIUM LEPRAE and produces diffuse granulomatous skin lesions in the form of nodules, macules, or papules. The peripheral nerves are involved symmetrically and neural sequelae occur in the advanced stage.
Type LL leprosy
GeneRIF:15726416
Full lepromatous leprosy[accessedResource: SNOMEDCT:21560005][accessDate: 04-11-2010]
LL - Full lepromatous leprosy[accessedResource: SNOMEDCT:21560005][accessDate: 04-11-2010]
GeneRIF:12445799
Type L leprosy[accessedResource: SNOMEDCT:21560005][accessDate: 04-11-2010]
Leprosy, Cutaneous[accessedResource: MSH:D015440][accessDate: 04-11-2010]
Leprosies, Nodular
LL - Full lepromatous leprosy
Lepromatous Leprosies[accessedResource: MSH:D015440][accessDate: 04-11-2010]
DOID:10887
Lepromatous Leprosies
GeneRIF:12743658
Full lepromatous leprosy
MSH:D015440
Nodular Leprosy
Leprosy, Cutaneous
Cutaneous Leprosies[accessedResource: MSH:D015440][accessDate: 04-11-2010]
Leprosy, Nodular[accessedResource: MSH:D015440][accessDate: 04-11-2010]
Lepromatous leprosy [type L][accessedResource: DOID:10887][accessDate: 04-11-2010]
A chronic communicable infection which is a principal or polar form of LEPROSY. This disorder is caused by MYCOBACTERIUM LEPRAE and produces diffuse granulomatous skin lesions in the form of nodules, macules, or papules. The peripheral nerves are involved symmetrically and neural sequelae occur in the advanced stage.[accessedResource: MSH:D015440][accessDate: 04-11-2010]
Type LL leprosy[accessedResource: SNOMEDCT:21560005][accessDate: 04-11-2010]
lepromatous leprosy
Lepromatous leprosy (disorder)
Type L leprosy
InChIKey=VHBFFQKBGNRLFZ-UHFFFAOYAG
2-phenyl-gamma-benzopyrone
A flavone that has formula C15H10O2.
O=c1cc(oc2ccccc12)-c1ccccc1
InChI=1/C15H10O2/c16-13-10-15(11-6-2-1-3-7-11)17-14-9-5-4-8-12(13)14/h1-10H
Flavon
2-phenyl-4H-chromen-4-one
2-phenylchromone
A member of the flavones that has formula C15H10O2.
C15H10O2
2-phenyl-4H-benzopyran-4-one
2-phenyl-4H-1-benzopyran-4-one
http://www.ebi.ac.uk/efo/EFO_0001535
flavone
CHEBI:42491
A cell which moves among different tissues of the body, via blood, lymph, or other medium.[accessedResource: CL:0000080][accessDate: 04-11-2010]
Ele Holloway
James Malone
A cell which moves among different tissues of the body, via blood, lymph, or other medium.
circulating cell
CL:0000080
true
A derived unit which is a standard measure of the mass of a homogeneous substance containing 6.02 x 1023 atoms or molecules.
molar mass unit
Distal portion of anterior descending branch of left coronary artery[accessedResource: FMAID:3884][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
distal portion of anterior interventricular branch of left coronary artery
FMAID:3884
Distal portion of anterior descending branch of left coronary artery
HCC3153
James Malone
SNOMEDCT:235494005
Relapsing pancreatitis[accessedResource: SNOMEDCT:234689009][accessDate: 04-11-2010]
James Malone
Relapsing pancreatitis (disorder)[accessedResource: DOID:13315][accessDate: 04-11-2010]
GeneRIF:14657708
Chronic pancreatitis (disorder)
INFLAMMATION of the PANCREAS that is characterized by recurring or persistent ABDOMINAL PAIN with or without STEATORRHEA or DIABETES MELLITUS. It is characterized by the irregular destruction of the pancreatic parenchyma which may be focal, segmental, or diffuse.
Pancreatitis, recurrent[accessedResource: DOID:13315][accessDate: 04-11-2010]
chronic pancreatitis (disorder)[accessedResource: DOID:13315][accessDate: 04-11-2010]
chronic pancreatitis (disorder) [Ambiguous]
MSH:D050500
GeneRIF:11950817
CP - Chronic pancreatitis
GeneRIF:15066699
GeneRIF:15097871
chronic pancreatitis (disorder) [Ambiguous][accessedResource: DOID:13315][accessDate: 04-11-2010]
GeneRIF:12131767
GeneRIF:12808117
Relapsing pancreatitis
GeneRIF:15749232
Recurrent pancreatitis (disorder)
Recurrent pancreatitis (disorder)[accessedResource: SNOMEDCT:233870001][accessDate: 04-11-2010]
DOID:13315
CP - chronic pancreatitis[accessedResource: DOID:13315][accessDate: 04-11-2010]
SNOMEDCT:234689009
Pancreatitis, recurrent
GeneRIF:12647793
ICD9:577.1
GeneRIF:15097853
SNOMEDCT:233870001
INFLAMMATION of the PANCREAS that is characterized by recurring or persistent ABDOMINAL PAIN with or without STEATORRHEA or DIABETES MELLITUS. It is characterized by the irregular destruction of the pancreatic parenchyma which may be focal, segmental, or diffuse.[accessedResource: MSH:D050500][accessDate: 04-11-2010]
GeneRIF:15802940
GeneRIF:12142743
Relapsing pancreatitis (disorder)
GeneRIF:15855826
chronic pancreatitis
James Malone
true
An experiment in which re-sequencing technology (Solexa/454) is used to generate sequence which can be used to determine nucleic acid sequence, analyse the transcibed regions of the genome, or to quantitate transcript abundance
1.8
Split into two terms. RNA-seq and DNA-seq
obsolete_re-sequencing
ArrayExpress production team
CASRN:101200-48-0
James Malone
Ele Holloway
tribenuron-methyl
Tomasz Adamusiak
DSSTox_CID:4101
STRUCTURE_Formula:C15H17N5O6S
STRUCTURE_ChemicalName_IUPAC:methyl 2-[({[(4-methoxy-6-methyl-1,3,5-triazin-2-yl)(methyl)amino]carbonyl}amino)sulfonyl]benzoate
DSSTox_Generic_SID:24101
Cells of the pancreas that secrete digestive enzymes, the archetypal secretory cell upon which much of the early work on the sequence of events in the secretory process was done.[accessedResource: BTO:0000028][accessDate: 04-11-2010]
pancreatic acinus
CL:0000083
epithelial cell of exocrine pancreas[accessedResource: CL:0000083][accessDate: 04-11-2010]
Jie Zheng
Cells of the pancreas that secrete digestive enzymes, the archetypal secretory cell upon which much of the early work on the sequence of events in the secretory process was done.
An epithelial cell of the pancreas.
exocrine pancreas cell
epithelial cell of exocrine pancreas
pancreatic acinus[accessedResource: BTO:0000028][accessDate: 04-11-2010]
BTO:0000028
pancreatic acinar cell[accessedResource: BTO:0000028][accessDate: 04-11-2010]
Tomasz Adamusiak
epithelial cell of pancreas
epithelial cell of pancreas[accessedResource: CL:0000083][accessDate: 04-11-2010]
pancreatic acinar cell
An epithelial cell of the pancreas.[accessedResource: CL:0000083][accessDate: 04-11-2010]
James Malone
C57BL/10 is a mouse strain as described in Jackson Laboratory http://www.informatics.jax.org/searches/reference.cgi?7550
C57BL/10
http://www.informatics.jax.org/searches/reference.cgi?7550
Ethyl Alcohol & Water, 10%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Alcool Etilico[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethylol
Denatured Alcohol Sd-39b[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Pyro[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethylol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Methylcarbinol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Alcohol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Beta-Aminoethanol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
ETA
Ethylolamine[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Alkohol
Alcohol Anhydrous[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Beta-Ethanolamine[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Jaysol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Methylcarbinol
James Malone
Ethyl Alcohol & Water, 5%
Thiofaco M-50[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Ethanol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Algrain
Ethyl Alcohol & Water, 40%
Alcohol, Diluted
Beta-Hydroxyethylamine[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-39c[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Tomasz Adamusiak
Aethylalkohol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
HSDB 531
Colamine
Ethyl Alcohol & Water, 95%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-3a
ETA[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Jaysol S
Denatured Alcohol Cd-5a[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
HSDB 531[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Algrain[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethanol Anhydrous
hydroxyethane
http://www.ebi.ac.uk/efo/EFO_0001531
spiritus vini
Alcool Ethylique[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-39c
Thanol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 70%
Denatured Alcohol Cd-5
Glycinol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-3a[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethanol Absolute Bp[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Beta-Hydroxyethylamine
Tecsol C
Ethanol, Spirit
Aethanol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
1-hydroxyethane
Reagent Alcohol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Absolute Alcohol
Denatured Alcohol Sd-28[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Anhydrol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
CCO
Tecsol C[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
[OEtH]
Denatured Alcohol Sd-39b
Ethyl Alcohol & Water, 80%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Alkohol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 20%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-17[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Synasol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Alcare Hand Degermer[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
ethanol
Ethanol, Silent Spirit
Ethyl Hydroxide[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Cd-10[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Beta-Aminoethanol
Aethylalkohol
Thanol
C2H5OH
Ethyl Alcohol & Water, 96%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Absolute Alcohol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Aminoethanol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 20%
Alcohol Anhydrous
Tecsol
Denatured Alcohol Cd-5a
Jaysol S[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Cd-5[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Beta-Aminoethyl Alcohol
Aethanol
Etanolo
Ethyl Hydrate
Denatured Alcohol Sd-17
Alcohol, Diluted[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 96%
Ethyl Alcohol & Water, 5%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
alcool ethylique
Ethyl Alcohol, Denatured[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-23a[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Thiofaco M-50
Ethyl Alcohol
Denatured Alcohol Sd-1[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Envision Conditioner Pdd 9020
Ethanol, Silent Spirit[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
USAF EK-1597[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
InChIKey=LFQSCWFLJHTTHZ-UHFFFAOYAB
Etanolo[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
A clear, colorless liquid rapidly absorbed from the gastrointestinal tract and distributed throughout the body. It has bactericidal activity and is used often as a topical disinfectant. It is widely used as a solvent and preservative in pharmaceutical preparations as well as serving as the primary ingredient in alcoholic beverages. (PubChem) Pharmacology: Alcohol produces injury to cells by dehydration and precipitation of the cytoplasm or protoplasm. This accounts for its bacteriocidal and antifungal action. When alcohol is injected in close proximity to nerve tissues, it produces neuritis and nerve degeneration (neurolysis). Ninety to 98% of ethanol that enters the body is completely oxidized. Ethanol is also used as a cosolvent to dissolve many insoluble drugs and to serve as a mild sedative in some medicinal formulations. Mechanism of action: The sedative effects of ethanol are mediated through binding to GABA receptors and glycine receptors (alpha 1 and alpha 2 subunits). In its role as an anti-infective, ethanol acts as an osmolyte or dehydrating agent that disrupts the osmotic balance across cell membranes. Drug type: Approved. Small Molecule. Drug category: Anti-Infective Agents, Local. Central Nervous System Depressants. Disinfectants. Solvents[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Glycinol
Denatured Alcohol Sd-1
Ethanol Extra Pure[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Anhydrol
NIFSTD:nlx_chem_20090205
Caswell No, 426[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Alcohol
Denatured Alcohol Sd-13a[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethanol Anhydrous[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethanol Absolute Bp
[CH2Me(OH)]
Ethyl Alcohol & Water, 30%
Jaysol
A member of the ethanols that has formula C2H6O.
Ethyl Alcohol & Water, 10%
Denatured Alcohol Sd-23a
Ethanol 200 Proof
Denatured Alcohol Sd-13a
Dehydrated ethanol
Tecsol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 80%
C2H6O
Synasol
Ethyl Alcohol & Water, 30%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethanol Extra Pure
Ethanol Absolute
Denatured Alcohol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Beta-Aminoethyl Alcohol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
EtOH[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Alcohol, Dehydrated
Alcohol, Dehydrated[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Colamine[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Dehydrated Ethanol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 70%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Alcohol Sd-28
Ethyl Alcohol, Anhydrous[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Alcool Etilico
Beta-Ethanolamine
Denatured Alcohol
Denatured Alcohol Cd-10
Alcare Hand Degermer
Absolute Ethanol[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol & Water, 95%
InChI=1/C2H6O/c1-2-3/h3H,2H2,1H3
Ethyl Hydrate[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Pyro
Ethyl Alcohol & Water, 40%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
An ethanol that has formula C2H6O.
Ethyl Alcohol & Water, 50%
A clear, colorless liquid rapidly absorbed from the gastrointestinal tract and distributed throughout the body. It has bactericidal activity and is used often as a topical disinfectant. It is widely used as a solvent and preservative in pharmaceutical preparations as well as serving as the primary ingredient in alcoholic beverages. (PubChem) Pharmacology: Alcohol produces injury to cells by dehydration and precipitation of the cytoplasm or protoplasm. This accounts for its bacteriocidal and antifungal action. When alcohol is injected in close proximity to nerve tissues, it produces neuritis and nerve degeneration (neurolysis). Ninety to 98% of ethanol that enters the body is completely oxidized. Ethanol is also used as a cosolvent to dissolve many insoluble drugs and to serve as a mild sedative in some medicinal formulations. Mechanism of action: The sedative effects of ethanol are mediated through binding to GABA receptors and glycine receptors (alpha 1 and alpha 2 subunits). In its role as an anti-infective, ethanol acts as an osmolyte or dehydrating agent that disrupts the osmotic balance across cell membranes. Drug type: Approved. Small Molecule. Drug category: Anti-Infective Agents, Local. Central Nervous System Depressants. Disinfectants. Solvents
etanol
Reagent Alcohol
Caswell No, 426
Ethyl Alcohol, Denatured
Aminoethanol
Envision Conditioner Pdd 9020[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
USAF EK-1597
Ethyl Alcohol & Water, 50%[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Denatured Ethanol
EtOH
alcohol etilico
Ethanol, Spirit[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Hydroxide
Ethanol 200 Proof[accessedResource: NIFSTD:nlx_chem_20090205][accessDate: 04-11-2010]
Ethyl Alcohol Anhydrous
Ethylolamine
James Malone
cleavage stage
Tomasz Adamusiak
pancreas primordium
ZFA:0000254
Infantile neuronal ceroid lipofuscinosis in which the signs and symptoms appear later in life.[accessedResource: NCIt:C85864][accessDate: 04-11-2010]
Tomasz Adamusiak
Infantile neuronal ceroid lipofuscinosis in which the signs and symptoms appear later in life.
late infantile neuronal ceroid lipofuscinosis
NCIt:C85864
[M]Malignant melanoma NOS[accessedResource: SNOMEDCT:269503007][accessDate: 04-11-2010]
GeneRIF:14695152
GeneRIF:15257316
GeneRIF:16098052
GeneRIF:12939282
GeneRIF:15848191
GeneRIF:15208686
GeneRIF:12014625
GeneRIF:14555513
James Malone
GeneRIF:14581607
GeneRIF:15024700
GeneRIF:14696968
GeneRIF:16081848
GeneRIF:14744083
GeneRIF:12650602
GeneRIF:15907783
GeneRIF:14508519
GeneRIF:12366697
GeneRIF:11884449
GeneRIF:12095976
GeneRIF:16129781
GeneRIF:15955107
GeneRIF:15210734
GeneRIF:15469480
Malignant Melanoma[accessedResource: NCIt:C3224][accessDate: 04-11-2010]
GeneRIF:12183361
GeneRIF:12516095
GeneRIF:15362372
GeneRIF:15610524
GeneRIF:15833878
GeneRIF:15001714
GeneRIF:15998788
GeneRIF:12208865
GeneRIF:11809675
GeneRIF:15330192
GeneRIF:15024079
GeneRIF:15843517
GeneRIF:12384558
GeneRIF:16103065
GeneRIF:15386421
GeneRIF:15547691
GeneRIF:15557124
GeneRIF:15955106
GeneRIF:16098042
GeneRIF:15991050
GeneRIF:15816840
GeneRIF:14999777
GeneRIF:11936276
GeneRIF:12208877
GeneRIF:16354196
GeneRIF:12018852
GeneRIF:12875987
GeneRIF:12230496
GeneRIF:15607961
GeneRIF:15509546
GeneRIF:15557758
GeneRIF:14618632
GeneRIF:15856464
GeneRIF:12777979
GeneRIF:14729600
GeneRIF:11812790
A malignant, usually aggressive tumor composed of atypical, neoplastic melanocytes. Most often, melanomas arise in the skin (cutaneous melanomas) and include the following histologic subtypes: superficial spreading melanoma, nodular melanoma, acral lentiginous melanoma, and lentigo maligna melanoma. Cutaneous melanomas may arise from acquired or congenital melanocytic or dysplastic nevi. Melanomas may also arise in other anatomic sites including the gastrointestinal system, eye, urinary tract, and reproductive system. Melanomas frequently metastasize to lymph nodes, liver, lungs, and brain.[accessedResource: NCIt:C3224][accessDate: 04-11-2010]
GeneRIF:11822878
Melanoma, NOS[accessedResource: SNOMEDCT:2092003][accessDate: 04-11-2010]
GeneRIF:12696065
GeneRIF:15133491
GeneRIF:15645118
GeneRIF:15657897
GeneRIF:15201995
GeneRIF:12883368
GeneRIF:15305155
GeneRIF:12538712
GeneRIF:11801603
GeneRIF:11891198
GeneRIF:15983061
GeneRIF:12736724
GeneRIF:14634801
GeneRIF:11930117
GeneRIF:14757863
GeneRIF:12060397
Malignant melanoma, no ICD-O subtype[accessedResource: SNOMEDCT:2092003][accessDate: 04-11-2010]
GeneRIF:14727087
GeneRIF:15009714
GeneRIF:15373802
malignant melanoma (disorder)
GeneRIF:15073111
DOID:1909
GeneRIF:15979576
GeneRIF:11918086
GeneRIF:11828257
GeneRIF:15026369
GeneRIF:15610528
GeneRIF:15179189
GeneRIF:12972299
GeneRIF:16277028
[M]Malignant melanoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:269503007][accessDate: 04-11-2010]
GeneRIF:15009731
GeneRIF:15313890
GeneRIF:12920221
GeneRIF:12631591
GeneRIF:16211213
GeneRIF:15743795
GeneRIF:15201991
GeneRIF:15782137
GeneRIF:12789289
GeneRIF:12459645
malignant melanoma (disorder)[accessedResource: DOID:1909][accessDate: 04-11-2010]
GeneRIF:15009726
GeneRIF:11500806
GeneRIF:14713106
GeneRIF:12670907
GeneRIF:15851010
GeneRIF:16140982
GeneRIF:15897876
GeneRIF:12072543
GeneRIF:15760339
GeneRIF:12058259
GeneRIF:15373781
GeneRIF:16008690
GeneRIF:12115481
GeneRIF:15999103
GeneRIF:15064726
GeneRIF:15721302
GeneRIF:12949795
GeneRIF:12618768
Malignant melanoma, no ICD-O subtype (morphologic abnormality)
GeneRIF:15694309
GeneRIF:12665595
GeneRIF:15299072
GeneRIF:12883358
GeneRIF:15210957
GeneRIF:12161512
Malignant melanoma, NOS[accessedResource: SNOMEDCT:2092003][accessDate: 04-11-2010]
GeneRIF:15221796
GeneRIF:11828253
GeneRIF:15140228
GeneRIF:15492811
GeneRIF:12072536
Melanoma, NOS
GeneRIF:15383569
GeneRIF:12218055
GeneRIF:15827341
GeneRIF:12824159
GeneRIF:15843590
GeneRIF:12209993
GeneRIF:15009113
GeneRIF:15572761
GeneRIF:12235125
GeneRIF:16033529
GeneRIF:14585195
GeneRIF:15834638
GeneRIF:15897908
malignant melanoma NOS (morphologic abnormality)[accessedResource: DOID:1909][accessDate: 04-11-2010]
malignant melanoma, morphology (morphologic abnormality)[accessedResource: DOID:1909][accessDate: 04-11-2010]
GeneRIF:15466193
GeneRIF:12682852
GeneRIF:11781826
GeneRIF:12086670
GeneRIF:14675203
GeneRIF:15832775
GeneRIF:14630948
GeneRIF:14646619
GeneRIF:12068308
GeneRIF:15753377
SNOMEDCT:2092003
GeneRIF:15014028
GeneRIF:12074634
GeneRIF:15024080
SNOMEDCT:269503007
GeneRIF:12296515
GeneRIF:12920225
GeneRIF:12850810
GeneRIF:15724013
GeneRIF:12036934
GeneRIF:12810628
GeneRIF:12650606
GeneRIF:15009703
GeneRIF:15688405
GeneRIF:15149859
GeneRIF:12747754
Melanomas, Malignant[accessedResource: MSH:D008545][accessDate: 04-11-2010]
Naevocarcinoma
GeneRIF:12170182
GeneRIF:11992548
GeneRIF:15577313
GeneRIF:12107107
GeneRIF:12530093
GeneRIF:15998953
GeneRIF:15009102
GeneRIF:15855653
GeneRIF:12067988
GeneRIF:14676121
GeneRIF:12759390
malignant melanoma NOS (morphologic abnormality)
GeneRIF:12958194
GeneRIF:12021307
GeneRIF:12168790
GeneRIF:15832174
GeneRIF:15814740
GeneRIF:15305164
Melanomas, Malignant
[M]Malignant melanoma NOS
GeneRIF:15140234
GeneRIF:14666660
GeneRIF:15716025
GeneRIF:11807902
GeneRIF:15634901
GeneRIF:15475451
Malignant melanoma, NOS
GeneRIF:12376466
MM - Malignant melanoma[accessedResource: SNOMEDCT:2092003][accessDate: 04-11-2010]
GeneRIF:15187113
NCIt:C3224
GeneRIF:16040804
GeneRIF:15273735
GeneRIF:15373782
GeneRIF:12883362
GeneRIF:12438452
GeneRIF:12459643
GeneRIF:12445207
A malignant neoplasm derived from cells that are capable of forming melanin, which may occur in the skin of any part of the body, in the eye, or, rarely, in the mucous membranes of the genitalia, anus, oral cavity, or other sites. It occurs mostly in adults and may originate de novo or from a pigmented nevus or malignant lentigo. Melanomas frequently metastasize widely, and the regional lymph nodes, liver, lungs, and brain are likely to be involved. The incidence of malignant skin melanomas is rising rapidly in all parts of the world. (Stedman, 25th ed; from Rook et al., Textbook of Dermatology, 4th ed, p2445)
GeneRIF:15987741
GeneRIF:12198771
GeneRIF:12670917
GeneRIF:14583455
GeneRIF:12894561
GeneRIF:14506702
melanoma
GeneRIF:12750156
GeneRIF:15179190
GeneRIF:15093732
Malignant melanoma (morphologic abnormality)
GeneRIF:12716902
GeneRIF:14612926
GeneRIF:15608673
GeneRIF:15265913
GeneRIF:11992404
GeneRIF:15014019
GeneRIF:12848854
Melanomas
GeneRIF:15869411
GeneRIF:12096926
GeneRIF:15880581
GeneRIF:16189525
GeneRIF:16007121
MM - Malignant melanoma
GeneRIF:12950721
GeneRIF:12777984
GeneRIF:15993843
GeneRIF:15564140
GeneRIF:15191558
GeneRIF:12664607
GeneRIF:12729801
GeneRIF:11839575
GeneRIF:12189238
GeneRIF:15009718
GeneRIF:15781639
GeneRIF:15150307
GeneRIF:15166498
GeneRIF:16234564
GeneRIF:12140378
GeneRIF:12927791
Malignant Melanoma
GeneRIF:12655789
GeneRIF:12170183
GeneRIF:15618925
GeneRIF:10449755
GeneRIF:12839565
GeneRIF:12579526
GeneRIF:12619120
GeneRIF:15817166
GeneRIF:14726258
GeneRIF:15880589
GeneRIF:15328193
GeneRIF:12687014
GeneRIF:15809735
GeneRIF:15714119
GeneRIF:15832175
GeneRIF:16021575
GeneRIF:12710945
GeneRIF:12706526
GeneRIF:11959101
GeneRIF:14732231
GeneRIF:14991539
Malignant melanoma, morphology (morphologic abnormality)
Malignant melanoma (morphologic abnormality)[accessedResource: SNOMEDCT:2092003][accessDate: 04-11-2010]
GeneRIF:12485936
GeneRIF:11828258
Melanosarcoma
GeneRIF:14735200
SNOMEDCT:372244006
GeneRIF:15373779
GeneRIF:12783933
GeneRIF:12704387
GeneRIF:15743794
GeneRIF:12777976
GeneRIF:15366927
MSH:D008545
GeneRIF:12239452
GeneRIF:11500805
GeneRIF:12028585
Malignant melanoma, no ICD-O subtype
GeneRIF:15714116
GeneRIF:12459646
GeneRIF:12170178
GeneRIF:15592448
GeneRIF:14961576
GeneRIF:12124804
Malignant melanoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:2092003][accessDate: 04-11-2010]
A malignant neoplasm derived from cells that are capable of forming melanin, which may occur in the skin of any part of the body, in the eye, or, rarely, in the mucous membranes of the genitalia, anus, oral cavity, or other sites. It occurs mostly in adults and may originate de novo or from a pigmented nevus or malignant lentigo. Melanomas frequently metastasize widely, and the regional lymph nodes, liver, lungs, and brain are likely to be involved. The incidence of malignant skin melanomas is rising rapidly in all parts of the world. (Stedman, 25th ed; from Rook et al., Textbook of Dermatology, 4th ed, p2445)[accessedResource: MSH:D008545][accessDate: 04-11-2010]
GeneRIF:12140383
GeneRIF:11962515
GeneRIF:12080186
GeneRIF:15649154
GeneRIF:15277467
GeneRIF:12017286
GeneRIF:14522897
GeneRIF:12793438
GeneRIF:15856016
GeneRIF:12606943
GeneRIF:12538723
GeneRIF:12950144
Melanomas[accessedResource: MSH:D008545][accessDate: 04-11-2010]
GeneRIF:14632199
GeneRIF:12821780
GeneRIF:15551350
GeneRIF:14962105
GeneRIF:12230498
GeneRIF:12855667
GeneRIF:14559981
GeneRIF:12362978
GeneRIF:15009721
GeneRIF:11992541
GeneRIF:15107545
GeneRIF:11844832
GeneRIF:12482591
GeneRIF:14500642
GeneRIF:12439754
GeneRIF:11996105
[M]Malignant melanoma NOS (morphologic abnormality)
GeneRIF:12230495
GeneRIF:12405287
GeneRIF:14719109
GeneRIF:14602237
GeneRIF:15161053
A malignant, usually aggressive tumor composed of atypical, neoplastic melanocytes. Most often, melanomas arise in the skin (cutaneous melanomas) and include the following histologic subtypes: superficial spreading melanoma, nodular melanoma, acral lentiginous melanoma, and lentigo maligna melanoma. Cutaneous melanomas may arise from acquired or congenital melanocytic or dysplastic nevi. Melanomas may also arise in other anatomic sites including the gastrointestinal system, eye, urinary tract, and reproductive system. Melanomas frequently metastasize to lymph nodes, liver, lungs, and brain.
GeneRIF:12140376
GeneRIF:12140380
GeneRIF:15161700
GeneRIF:12082534
GeneRIF:15491322
GeneRIF:16232302
GeneRIF:12243754
Melanosarcoma[accessedResource: SNOMEDCT:372244006][accessDate: 04-11-2010]
GeneRIF:12823444
GeneRIF:15305193
GeneRIF:15856458
GeneRIF:15492257
GeneRIF:15146471
GeneRIF:12490317
GeneRIF:12533668
GeneRIF:14704859
GeneRIF:15184373
Naevocarcinoma[accessedResource: DOID:1909][accessDate: 04-11-2010]
GeneRIF:12454511
GeneRIF:11962738
GeneRIF:11830592
GeneRIF:16272362
GeneRIF:12684636
GeneRIF:12702150
GeneRIF:15577328
GeneRIF:15610525
GeneRIF:15305153
Ele Holloway
James Malone
TIVE is a human cell line.
TIVE
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#injury_design[accessedResource: MO_726][accessDate: 04-11-2010]
Tomasz Adamusiak
injury design
MO_726
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#injury_design
Tomasz Adamusiak
trigeminal placode
ZFA:0000162
James Malone
gastrula 90%-epiboly
ZFS:0000021
Tomasz Adamusiak
labral sensory complex primordium
FBbt:00005546
DPN; 2,3-bis(4-hydroxyphenyl)propanenitrile
2,3-bis(4-hydroxyphenyl)-propionitrile
Ele Holloway
CASRN:1428-67-7
James Malone
DSSTox_Generic_SID:40387
Tomasz Adamusiak
DSSTox_CID:20387
James Malone
http://www.ebi.ac.uk/efo/EFO_0001993
Mus musculus
house mouse
Natural Language Generator 8th April 2010
A GM18507 is a cell line.
A GM18507 is all of the following: something that has as quality a male, something that derives from a Homo sapiens, and something that derives from a lymphoblast.
GM18507
James Malone
hyaluronan
40500
9004-61-9
Ele Holloway
James Malone
639V
A 2-D extent quality inhering in a bearer by virtue of the bearer's two dimensional extent.[accessedResource: PATO:0001323][accessDate: 04-11-2010]
James Malone
A 2-D extent quality inhering in a bearer by virtue of the bearer's two dimensional extent.
An area is a size quality which describes the two dimensional extent of a material entity.
area
PATO:0001323
A membranous sac in animals that serves as the receptacle of a liquid or contains gas.
AAO:0000623
EMAPA:18321
FMAID:15900
bladder
MAT:0000122
The distensible sac-like organ that functions as a reservoir of urine, collecting from the kidneys and eliminating via the urethra.
NCIt:C12414
The distensible sac-like organ that functions as a reservoir of urine, collecting from the kidneys and eliminating via the urethra.[accessedResource: NCIt:C12414][accessDate: 04-11-2010]
XAO:0000154
EHDAA:9328
MA:0000380
A membranous sac in animals that serves as the receptacle of a liquid or contains gas.[accessedResource: BTO:0000123][accessDate: 04-11-2010]
Urinary System, Bladder
BTO:0000123
Urinary System, Bladder[accessedResource: NCIt:C12414][accessDate: 04-11-2010]
EV:0100098
James Malone
urinary bladder[accessedResource: MAT:0000122][accessDate: 04-11-2010]
Organ with organ cavity which is continuous proximally with the right and left ureters and distally with the urethra. Examples: There is only one urinary bladder.
SAEL:115
Urinary bladder
CHEBI:35620
James Malone
http://www.ebi.ac.uk/efo/EFO_0001848
A drug used to cause dilation of the blood vessels.
vasodilator agent
vasodilator
vasodilator agents
Tomasz Adamusiak
apical ectodermal ridge pelvic fin bud
ZFA:0001385
cholinergic-blocking agents
agent anticholinergique
Anticholinergikum
Anticholinergika
James Malone
cholinergic antagonist
Any drug that binds to but does not activate cholinergic receptors, thereby blocking the actions of acetylcholine or cholinergic agonists.
CHEBI:48873
http://www.ebi.ac.uk/efo/EFO_0001880
agente anticolinergico
anticholinergiques
acetylcholine antagonists
acetylcholine receptor antagonist
anticholinergics
anticolinergicos
anticholinergic agents
agentes anticolinergicos
James Malone
SALK_049497 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=germplasm&id=4652085
SALK_049497
Germplasm:4652085
Tomasz Adamusiak
olfactory region
ZFA:0000351
James Malone
CHEBI:28694
Kupfer
A copper group element atom that has formula Cu.
cuprum
Cu
InChI=1/Cu
cobre
InChIKey=RYGMFSIKBFXOCR-UHFFFAOYAN
cuivre
A copper group element that has formula Cu.
http://www.ebi.ac.uk/efo/EFO_0002406
copper
29Cu
copper atom
Ele Holloway
SKNEP1
Ele Holloway
James Malone
Tomasz Adamusiak
anterior lateral plate mesoderm
ZFA:0005041
James Malone
http://www.ebi.ac.uk/efo/EFO_0002004
arsenic oxides
CHEBI:50527
arsenic oxide
InChIKey=GOMNOOKGLZYEJT-UHFFFAOYAO
http://www.ebi.ac.uk/efo/EFO_0001558
Isoflavon
isoflavone
3-phenyl-4H-chromen-4-one
InChI=1/C15H10O2/c16-15-12-8-4-5-9-14(12)17-10-13(15)11-6-2-1-3-7-11/h1-10H
O=c1c(coc2ccccc12)-c1ccccc1
C15H10O2
3-phenyl-4H-1-benzopyran-4-one
A member of the isoflavones that has formula C15H10O2.
CHEBI:18220
3-Phenylchromone
An isoflavone that has formula C15H10O2.
James Malone
CS57750 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158774&type=germplasm
CS57750
http://www.arabidopsis.org/servlets/TairObject?id=1005158774&type=germplasm
cis-aconitate(3-)
cis-aconitate
Tomasz Adamusiak
otolith organ
ZFA:0000559
CCRFCEM
Ele Holloway
James Malone
A bud that will develop into a flower.[accessedResource: BTO:0000470][accessDate: 04-11-2010]
James Malone
A bud that will develop into a flower.
flower bud
BTO:0000470
Tomasz Adamusiak
neural crest telencephalon
ZFA:0000812
Tomasz Adamusiak
yolk sac
FMAID:87180
clindamycin
18323-44-9
Flora Logan
James Malone
A microscopy assay is an assay that provides images of molecules at various resolution depending on the technology used.
microscopy assay
Tomasz Adamusiak
presumptive rhombomere 7
ZFA:0001209
DSSTox_CID:22556
STRUCTURE_ChemicalName_IUPAC:arsenous trichloride
Ele Holloway
CASRN:7784-34-1
James Malone
DSSTox_Generic_SID:42556
AsCl3
arsenic chloride
Tomasz Adamusiak
STRUCTURE_Formula:AsCl3
CHEBI:18723
Ele Holloway
InChIKey=SNICXCGAKADSCV-UHFFFAOYAX
CN1CCCC1c1cccnc1
Nikotin
3-(1-methylpyrrolidin-2-yl)pyridine
http://www.ebi.ac.uk/efo/EFO_0002415
nicotine
Nicotin
A pyrrolidine alkaloid that has formula C10H14N2.
James Malone
(RS)-nicotine
C10H14N2
InChI=1/C10H14N2/c1-12-7-3-5-10(12)9-4-2-6-11-8-9/h2,4,6,8,10H,3,5,7H2,1H3
Ele Holloway
James Malone
COLO357
border cell[accessedResource: FBbt:00004905][accessDate: 04-11-2010]
Tomasz Adamusiak
border follicle cell
CL:0000579
FBbt:00004905
border cell
James Malone
Any cell line that is derived from the prostate.
prostate derived cell line
James Malone
XAO:0000328
SAEL:101
MFO:0003100
EMAPA:18767
A highly vascular ductless organ that is located in the left abdominal region near the stomach or intestine of most vertebrates and is concerned with final destruction of red blood cells, filtration and storage of blood, and production of lymphocytes.[accessedResource: BTO:0001281][accessDate: 04-11-2010]
spleen
TAO:0000436
A highly vascular ductless organ that is located in the left abdominal region near the stomach or intestine of most vertebrates and is concerned with final destruction of red blood cells, filtration and storage of blood, and production of lymphocytes.
ZFA:0000436
EV:0100055
FMAID:7196
MA:0000141
BTO:0001281
MAT:0000085
Tomasz Adamusiak
neural arch
ZFA:0001066
Da
unified atomic mass unit
An independently to the base SI units defined mass unit which is equal to one twelfth of the mass of an unbound atom of the carbon-12 nuclide, at rest and in its ground state.
A dalton is a mass unit is an independent unit to the base SI units and is equal to one twelfth of the mass of an unbound atom of the carbon-12 nuclide, at rest and in its ground state.
true
James Malone
u
UO:0000221
http://www.ebi.ac.uk/efo/EFO_0001710
dalton
antimanic drugs
http://www.ebi.ac.uk/efo/EFO_0001840
antimanic agent
James Malone
antimanics
CHEBI:35477
Antimanic drugs are agents used to treat bipolar disorders or mania associated with other affective disorders.
antimanic drug
The principal muscle tissue of the vertebrate heart made up of striated fibers that appear to be separated from each other under the electron microscope but that function in long-term rhythmic contraction as if in protoplasmic continuity.
EMAPA:16208
ZFA:0001319
cardiac muscle[accessedResource: ZFA:0001319][accessDate: 04-11-2010]
Muscle of heart
cardiac muscle
EV:0100022
TAO:0001319
MA:0000080
Muscle layer of organ which has as its parts the myocardium proper and the conducting system of the heart.
XAO:0000065
Muscle of heart[accessedResource: FMAID:9462][accessDate: 04-11-2010]
The principal muscle tissue of the vertebrate heart made up of striated fibers that appear to be separated from each other under the electron microscope but that function in long-term rhythmic contraction as if in protoplasmic continuity.[accessedResource: BTO:0000199][accessDate: 04-11-2010]
BTO:0000199
FMAID:9462
James Malone
The middle and thickest layer of the heart wall, composed of cardiac muscle.[accessedResource: BTO:0000901][accessDate: 04-11-2010]
Heart muscle
MAT:0000453
The middle and thickest layer of the heart wall, composed of cardiac muscle.
heart muscle[accessedResource: BTO:0000199][accessDate: 04-11-2010]
myocardium
BTO:0000901
James Malone
CS57626 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158650&type=germplasm
CS57626
http://www.arabidopsis.org/servlets/TairObject?id=1005158650&type=germplasm
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_type_comparison_design[accessedResource: MO_764][accessDate: 04-11-2010]
Tomasz Adamusiak
cell type comparison design
MO_764
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_type_comparison_design
Epileptic[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
Epilepsy, unspecified, without mention of intractable epilepsy[accessedResource: ICD9:345.90][accessDate: 04-11-2010]
ICD9:345.81
Epilepsy, unspecified, without mention of intractable epilepsy
SNOMEDCT:128613002
GeneRIF:12460603
James Malone
GeneRIF:12875997
Other forms of epilepsy NOS (disorder)[accessedResource: SNOMEDCT:193025006][accessDate: 04-11-2010]
GeneRIF:12185771
Epileptic disorder, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
GeneRIF:15026125
GeneRIF:12702713
Generalized seizure
Epileptic convulsions, NOS
Epileptic fits[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
Epileptic seizures
ICD9:345.90
[X]Other epilepsy[accessedResource: SNOMEDCT:194491006][accessDate: 04-11-2010]
Other forms of epilepsy, with intractable epilepsy
Other forms of epilepsy[accessedResource: SNOMEDCT:193020001][accessDate: 04-11-2010]
SNOMEDCT:194491006
Epileptic convulsions, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
GeneRIF:14736855
GeneRIF:15979590
GeneRIF:15120744
Seizure disorder (disorder)
Epilepsy and recurrent seizures[accessedResource: ICD9:345][accessDate: 04-11-2010]
Epileptic fit[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
Epileptic seizure (finding)
EPILEPSY NOS W INTR EPIL
Generalized fit
GeneRIF:12773553
Epileptic seizure (finding)[accessedResource: SNOMEDCT:313307000][accessDate: 04-11-2010]
Other forms of epilepsy (disorder)[accessedResource: SNOMEDCT:193020001][accessDate: 04-11-2010]
GeneRIF:15505174
SNOMEDCT:84757009
Epilepsy, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
Epilepsy NOS (disorder)
SNOMEDCT:267593008
GeneRIF:12648752
Epilepsy, unspecified, with intractable epilepsy
Epileptic fits, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
SNOMEDCT:246545002
Generalised fit[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
GeneRIF:12435565
Seizure Disorder[accessedResource: NIFSTD:birnlex_12718][accessDate: 04-11-2010]
Tomasz Adamusiak
Epilepsy, unspecified[accessedResource: ICD9:345.9][accessDate: 04-11-2010]
Generalized fit[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
Epilepsy and recurrent seizures
Other forms of epilepsy NOS[accessedResource: SNOMEDCT:193025006][accessDate: 04-11-2010]
Epilepsy, unspecified, with intractable epilepsy[accessedResource: ICD9:345.91][accessDate: 04-11-2010]
GeneRIF:15304595
GeneRIF:15288497
Epileptic
ICD9:345
GeneRIF:16129091
Epileptic attack, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
Epileptic attack[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
Epileptic disorder[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
Other forms of epilepsy (disorder)
Epilectic attack, NOS
GeneRIF:11889467
GeneRIF:14597704
Epileptic seizures, NOS
Epilepsy (disorder)
[X]Other epilepsy (disorder)
GeneRIF:16007083
Other forms of epilepsy
Generalized seizure (finding)[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
SNOMEDCT:313307000
GeneRIF:12533622
EF - Epileptic fit
Other forms of epilepsy NOS (disorder)
Epilepsy NOS (disorder)[accessedResource: SNOMEDCT:267593008][accessDate: 04-11-2010]
DOID:1826
Seizure disorder
GeneRIF:15970629
GeneRIF:12000122
Epileptic fits, NOS
[X]Other epilepsy
ICD9:345.8
Generalised seizure
Epilectic attack, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
GeneRIF:15452324
GeneRIF:12115687
EPILEP NOS W/O INTR EPIL
GeneRIF:16049933
GeneRIF:15282290
Epileptic seizures, NOS[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
Epileptic fit
GeneRIF:12746865
GeneRIF:12482897
GeneRIF:14646589
Epileptic fits
GeneRIF:15637270
A disorder characterized by recurrent episodes of paroxysmal brain dysfunction due to a sudden, disorderly, and excessive neuronal discharge. Epilepsy classification systems are generally based upon: (1) clinical features of the seizure episodes (e.g., motor seizure), (2) etiology (e.g., post-traumatic), (3) anatomic site of seizure origin (e.g., frontal lobe seizure), (4) tendency to spread to other structures in the brain, and (5) temporal patterns (e.g., nocturnal epilepsy) (MeSH).[accessedResource: NIFSTD:birnlex_12718][accessDate: 04-11-2010]
Epileptic convulsions[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
A disorder characterized by recurrent seizures
GeneRIF:15461680
ICD9:345.91
Epilepsy, NOS
Epilepsy (disorder)[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
Epileptic seizures[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
GeneRIF:15790563
Epileptic attack
GeneRIF:15937479
Seizure disorder (disorder)[accessedResource: SNOMEDCT:128613002][accessDate: 04-11-2010]
GeneRIF:15483119
GeneRIF:16091474
Generalized convulsion
Epileptic disorder, NOS
Generalised convulsion[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
Other forms of epilepsy, without mention of intractable epilepsy[accessedResource: ICD9:345.80][accessDate: 04-11-2010]
GeneRIF:12686700
GeneRIF:12270687
GeneRIF:15505175
Epileptic attack, NOS
Generalised convulsion
SNOMEDCT:193025006
Generalized convulsion[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
GeneRIF:12960023
GeneRIF:15571623
epilepsy
Other forms of epilepsy, without mention of intractable epilepsy
Epileptic Seizure
GeneRIF:15452306
SNOMEDCT:193020001
GeneRIF:15006707
A disorder characterized by recurrent episodes of paroxysmal brain dysfunction due to a sudden, disorderly, and excessive neuronal discharge. Epilepsy classification systems are generally based upon: (1) clinical features of the seizure episodes (e.g., motor seizure), (2) etiology (e.g., post-traumatic), (3) anatomic site of seizure origin (e.g., frontal lobe seizure), (4) tendency to spread to other structures in the brain, and (5) temporal patterns (e.g., nocturnal epilepsy) (MeSH).
Other forms of epilepsy, with intractable epilepsy[accessedResource: ICD9:345.81][accessDate: 04-11-2010]
NIFSTD:birnlex_12718
[X]Other epilepsy (disorder)[accessedResource: SNOMEDCT:194491006][accessDate: 04-11-2010]
GeneRIF:15772097
Other forms of epilepsy and recurrent seizures[accessedResource: ICD9:345.8][accessDate: 04-11-2010]
Epileptic disorder
GeneRIF:15215304
GeneRIF:15009222
Generalised seizure[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
GeneRIF:15115830
EPILEPSY NEC W INTR EPIL[accessedResource: ICD9:345.81][accessDate: 04-11-2010]
GeneRIF:14984901
GeneRIF:14985377
EPILEP NEC W/O INTR EPIL
Other forms of epilepsy NOS
GeneRIF:15342642
Generalized seizure[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
Other forms of epilepsy and recurrent seizures
A brain disorder characterized by episodes of abnormally increased neuronal discharge resulting in transient episodes of sensory or motor neurological dysfunction, or psychic dysfunction. These episodes may or may not be associated with loss of consciousness or convulsions.
Generalized seizure (finding)
Epileptic Seizure[accessedResource: NIFSTD:birnlex_12718][accessDate: 04-11-2010]
GeneRIF:12095917
GeneRIF:12217514
EP - Epilepsy
ICD9:345.9
GeneRIF:12601092
GeneRIF:15160397
Epilepsy, unspecified
GeneRIF:12958597
EF - Epileptic fit[accessedResource: SNOMEDCT:246545002][accessDate: 04-11-2010]
GeneRIF:15567475
GeneRIF:15492925
EPILEPSY NEC W INTR EPIL
A disorder characterized by recurrent seizures[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
EPILEP NOS W/O INTR EPIL[accessedResource: ICD9:345.90][accessDate: 04-11-2010]
GeneRIF:14660671
GeneRIF:15665077
GeneRIF:16095760
ICD9:345.80
A brain disorder characterized by episodes of abnormally increased neuronal discharge resulting in transient episodes of sensory or motor neurological dysfunction, or psychic dysfunction. These episodes may or may not be associated with loss of consciousness or convulsions.[accessedResource: NCIt:C3020][accessDate: 04-11-2010]
GeneRIF:15258581
EP - Epilepsy[accessedResource: SNOMEDCT:84757009][accessDate: 04-11-2010]
GeneRIF:15159136
GeneRIF:12205640
EPILEPSY NOS W INTR EPIL[accessedResource: ICD9:345.91][accessDate: 04-11-2010]
NCIt:C3020
GeneRIF:15254012
EPILEP NEC W/O INTR EPIL[accessedResource: ICD9:345.80][accessDate: 04-11-2010]
Epileptic convulsions
Generalised fit
GeneRIF:12086636
Intestinum crassum caecum[accessedResource: FMAID:14541][accessDate: 04-11-2010]
intestinum caecum
intestinum caecum[accessedResource: BTO:0000166][accessDate: 04-11-2010]
Intestinum crassum caecum
EV:0100397
blindgut[accessedResource: BTO:0000166][accessDate: 04-11-2010]
The first part of the large intestine, forming a dilated pouch into which open the ileum, colon, and appendix vermiformis.
MA:00000334
EHDAA:3913
cecum
FMAID:14541
blind intestine[accessedResource: BTO:0000166][accessDate: 04-11-2010]
caecum
James Malone
cecum[accessedResource: MAT:0000288][accessDate: 04-11-2010]
MAT:0000288
blindgut
BTO:0000166
The first part of the large intestine, forming a dilated pouch into which open the ileum, colon, and appendix vermiformis.[accessedResource: BTO:0000166][accessDate: 04-11-2010]
blind intestine
SAEL:15
James Malone
A nasal placode
A tissue modifier is an anatomical modifier which describes some quality about a tissue.
tissue modifier
MAT:0000477
Undifferentiated; mitotic stem cell for other epithelial cell types; rounded or elliptical with little cytoplasm and few organelles; contain cytokeratin intermediate filament.[accessedResource: CL:0000646][accessDate: 04-11-2010]
James Malone
Undifferentiated; mitotic stem cell for other epithelial cell types; rounded or elliptical with little cytoplasm and few organelles; contain cytokeratin intermediate filament.
basal cell
CL:0000646
Tomasz Adamusiak
ventral midline neuron
FBbt:00005566
Tomasz Adamusiak
pharyngeal pouch 4
ZFA:0001134
http://www.ebi.ac.uk/efo/EFO_0002657
An endogenous compound that is formed in specialized organ or group of cells and carried to another organ or group of cells, in the same organism, upon which it has a specific regulatory function.
hormone
endocrine
hormones
A platinum coordination entity that has formula C6H12N2O4Pt.
[H][N]([H])([H])[Pt]1(OC(=O)C2(CCC2)C(=O)O1)[N]([H])([H])[H]
cbdca
cis-(1,1-cyclobutanedicarboxylato)diammineplatinum(II)
Paraplatin
InChI=1/C6H8O4.2H3N.Pt/c7-4(8)6(5(9)10)2-1-3-6;;;/h1-3H2,(H,7,8)(H,9,10);2*1H3;/q;;;+2/p-2/fC6H6O4.2H3N.Pt/q-2;;;m
carboplatin
C6H6O4Pt.2H3N
C6H12N2O4Pt
InChIKey=OLESAACUTLOWQZ-DRGNIJNRCF
cis-diammine(1,1-cyclobutanedicarboxylato)platinum(II)
(SP-4-2)-diammine[cyclobutane-1,1-dicarboxylato(2-)-kappa(2)O,O']platinum
cis-diammine(1,1-cyclobutanedicarboxylato)platinum
James Malone
Ele Holloway
769P
Well Differentiated Oligodendroglial Tumor
Well-Differentiated Oligodendrogliomas
Oligodendrogliomas, Adult
oligodendroglioma
Mixed Oligodendroglioma Ependymoma
Oligodendroglioma, Childhood
Oligodendroblastoma
NIFSTD:birnlex_12627
Anaplastic Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendrogliomas, Adult[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Anaplastic Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroblastoma[accessedResource: NIFSTD:birnlex_12627][accessDate: 04-11-2010]
Mixed Oligodendroglioma Astrocytoma[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
James Malone
SNOMEDCT:189920006
GeneRIF:16103065
DOID:3181
Oligodendroglioma-Astrocytoma, Mixed
[M]Oligodendroglioma NOS (morphologic abnormality)
A well-differentiated (WHO grade II), diffusely infiltrating neuroglial tumor, typically located in the cerebral hemispheres. It is composed predominantly of cells which morphologically resemble oligodendroglia. The neoplastic cells have rounded homogeneous nuclei and, on paraffin sections, a swollen, clear cytoplasm ('honeycomb' appearance). (Adapted from WHO.)
Oligodendroglioma NOS (morphologic abnormality)[accessedResource: DOID:3181][accessDate: 04-11-2010]
GeneRIF:15484698
Well Differentiated Oligodendroglial Tumor[accessedResource: NCIt:C3288][accessDate: 04-11-2010]
Oligodendroglioma-Astrocytomas, Mixed[accessedResource: MSH:D009837][accessDate: 04-11-2010]
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms (MeSH).
Well-Differentiated Oligodendroglioma
Oligodendroglioma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:73348003][accessDate: 04-11-2010]
Oligodendroglioma (morphologic abnormality)[accessedResource: SNOMEDCT:73348003][accessDate: 04-11-2010]
GeneRIF:15950764
Oligodendrogliomas, Childhood
SNOMEDCT:73348003
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms (MeSH).[accessedResource: NIFSTD:birnlex_12627][accessDate: 04-11-2010]
Oligodendroglioma, Well-Differentiated[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Adult Oligodendroglioma
WHO Grade II Oligodendroglial Neoplasm
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)[accessedResource: MSH:D009837][accessDate: 04-11-2010]
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)
Mixed Oligodendroglioma-Ependymomas
GeneRIF:12635659
GeneRIF:15993274
Adult Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 04-11-2010]
GeneRIF:12850541
Oligodendroglioma, no ICD-O subtype (morphologic abnormality)
Oligodendroglioma (morphologic abnormality)
Oligodendroglioma, no ICD-O subtype
Anaplastic Oligodendroglioma
Oligodendroblastomas
Oligodendroblastomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Mixed Oligodendroglioma-Ependymomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
[M]Oligodendroglioma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189920006][accessDate: 04-11-2010]
WELL DIFFER OLIGODENDROGLIOMA
Oligodendroglioma-Ependymoma, Mixed[accessedResource: MSH:D009837][accessDate: 04-11-2010]
GeneRIF:12908752
A well-differentiated (WHO grade II), diffusely infiltrating neuroglial tumor, typically located in the cerebral hemispheres. It is composed predominantly of cells which morphologically resemble oligodendroglia. The neoplastic cells have rounded homogeneous nuclei and, on paraffin sections, a swollen, clear cytoplasm ('honeycomb' appearance). (Adapted from WHO.)[accessedResource: NCIt:C3288][accessDate: 04-11-2010]
Oligodendroglioma, no ICD-O subtype[accessedResource: SNOMEDCT:73348003][accessDate: 04-11-2010]
Oligodendrogliomas, Anaplastic
Oligodendroglioma NOS (morphologic abnormality)
Oligodendroglioma, NOS
[M]Oligodendroglioma NOS[accessedResource: SNOMEDCT:189920006][accessDate: 04-11-2010]
Oligodendroglioma, NOS[accessedResource: SNOMEDCT:73348003][accessDate: 04-11-2010]
A well-differentiated (WHO grade II), diffusely infiltrating neuroglial tumor, typically located in the cerebral hemispheres. It is composed predominantly of cells which morphologically resemble oligodendroglia. The neoplastic cells have rounded homogeneous nuclei and, on paraffin sections, a swollen, clear cytoplasm (&apos;honeycomb&apos; appearance). (Adapted from WHO.)
Well-Differentiated Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
WHO Grade II Oligodendroglial Tumor
NCIt:C3288
WELL DIFFER OLIGODENDROGLIOMA[accessedResource: MSH:D009837][accessDate: 04-11-2010]
[M]Oligodendroglioma NOS
A well-differentiated (WHO grade II), diffusely infiltrating neuroglial tumor of adults, typically located in the cerebral hemispheres. It is composed predominantly of cells which morphologically resemble oligodendroglia. The neoplastic cells have rounded homogeneous nuclei and, on paraffin sections, a swollen, clear cytoplasm ('honeycomb' appearance). It generally recurs locally, with median post-operative survival times ranging from 3 to 5 years for patients with all histological grades. (Adapted from WHO.)
Oligodendrogliomas
WHO Grade II Oligodendroglial Tumor[accessedResource: NCIt:C3288][accessDate: 04-11-2010]
GeneRIF:15834925
Mixed Oligodendroglioma-Astrocytomas
WHO Grade II Oligodendroglial Neoplasm[accessedResource: NCIt:C3288][accessDate: 04-11-2010]
MSH:D009837
Tomasz Adamusiak
Oligodendrogliomas, Childhood[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroglioma, Childhood[accessedResource: MSH:D009837][accessDate: 04-11-2010]
James Malone
twin study
A study type is an experimental factor describing the method of investigating particular types of research questions or solving particular types of problems.
study design
PERSON: James Malone
S49
SchneiderSL2
James Malone
Ele Holloway
James Malone
SNU398
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#dye_swap_design[accessedResource: MO_858][accessDate: 04-11-2010]
Tomasz Adamusiak
dye swap design
MO_858
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#dye_swap_design
muscarinic antagonists
CHEBI:48876
http://www.ebi.ac.uk/efo/EFO_0001881
antimuscarinicos
James Malone
Antimuskarinika
muscarinic antagonist
A drug that binds to but does not activate muscarinic cholinergic receptors, thereby blocking the actions of endogenous acetylcholine or exogenous agonists.
antimuscarinic agents
muscarinic acetylcholine receptor antagonist
Antimuskarinikum
agents antimuscariniques
agentes antimuscarinicos
agente antimuscarinico
James Malone
CS57834 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158858&type=germplasm
CS57834
http://www.arabidopsis.org/servlets/TairObject?id=1005158858&type=germplasm
Tomasz Adamusiak
statoacoustic (VIII) ganglion
ZFA:0000588
Any neuron having a sensory function; an afferent neuron conveying sensory impulses.[accessedResource: CL:0000101][accessDate: 04-11-2010]
Ele Holloway
James Malone
Any neuron having a sensory function; an afferent neuron conveying sensory impulses.
sensory neuron
CL:0000101
James Malone
CS57858 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158882&type=germplasm
CS57858
http://www.arabidopsis.org/servlets/TairObject?id=1005158882&type=germplasm
James Malone
Tomasz Adamusiak
129P1/ReJ
NIFSTD:birnlex_152
http://jaxmice.jax.org/strain/001137.html
James Malone
CS57704 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158728&type=germplasm
CS57704
http://www.arabidopsis.org/servlets/TairObject?id=1005158728&type=germplasm
James Malone
MCF 10A
ceftriaxone
73384-59-5
Macroglobulinemia (disorder)[accessedResource: DOID:9080][accessDate: 04-11-2010]
Macroglobulinemia NOS (disorder)[accessedResource: DOID:9080][accessDate: 04-11-2010]
macroglobulinemia
Lymphoplasmacytic Lymphoma/Waldenstrom Macroglobulinemia[accessedResource: DOID:9080][accessDate: 04-11-2010]
Waldenstrom's macroglobulinaemia[accessedResource: DOID:9080][accessDate: 04-11-2010]
Macroglobulinemia (disorder)
Waldenstrom's macroglobulinaemia
Waldenstrom's macroglobulinemia (morphologic abnormality)
Waldenstrom's macroglobulinemia (disorder)[accessedResource: DOID:9080][accessDate: 04-11-2010]
Ele Holloway
Waldenstrm macroglobulinemia (disorder)
primary macroglobulinemia
Macroglobulinemia NOS (disorder)
Waldenstrom's macroglob'naemia[accessedResource: DOID:9080][accessDate: 04-11-2010]
primary macroglobulinemia[accessedResource: DOID:9080][accessDate: 04-11-2010]
Waldenstrom's macroglobulinemia (morphologic abnormality)[accessedResource: DOID:9080][accessDate: 04-11-2010]
Lymphoplasmacytic Lymphoma/Waldenstrom Macroglobulinemia
Waldenstrom's macroglobulinemia
Waldenstrom's macroglob'naemia
Waldenstrom's macroglobulinemia (disorder)
Tomasz Adamusiak
DOID:9080
Waldenstrm macroglobulinemia (disorder)[accessedResource: DOID:9080][accessDate: 04-11-2010]
This is no longer needed - use process or study design (if the design is for study).
ChIP-Chip array
true
An experiment type is an experimental factor describing the area of technology that was used to perform an experiment.
obsolete_experiment type
Tomasz Adamusiak
amnioserosa primordium
FBbt:00017000
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#replicate_design[accessedResource: MO_885][accessDate: 04-11-2010]
Tomasz Adamusiak
replicate design
MO_885
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#replicate_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#all_pairs[accessedResource: MO_565][accessDate: 04-11-2010]
Tomasz Adamusiak
all pairs
MO_565
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#all_pairs
HS578T
James Malone
Tomasz Adamusiak
urogenital papilla
ZFA:0001118
James Malone
A lung structuret is a respiratory system component which is part of a lung.
lung structure
James Malone
breast tumor luminal
A tissue-resident macrophage of the renal glomerular mesangium involved in the disposal and degradation of filtration residues, presentation of antigen to T cells and in tissue remodeling.[accessedResource: CL:0000777][accessDate: 04-11-2010]
A tissue-resident macrophage of the renal glomerular mesangium.
A tissue-resident macrophage of the renal glomerular mesangium involved in the disposal and degradation of filtration residues, presentation of antigen to T cells and in tissue remodeling.
mesangial phagocyte
James Malone
mesangial cell
mesangial cell[accessedResource: CL:0000777][accessDate: 04-11-2010]
CL:0000777
Tomasz Adamusiak
large intestine primordium
FBbt:00005505
Ele Holloway
James Malone
H4
Jie Zheng
CL:0000558
reticulocyte
Tomasz Adamusiak
An immature erythrocyte that changes the protein composition of its plasma membrane by exosome formation and extrusion. The types of protein removed differ between species though removal of the transferrin receptor is apparent in mammals and birds.[accessedResource: CL:0000558][accessDate: 04-11-2010]
An immature erythrocyte showing a basophilic reticulum under vital staining.
An immature erythrocyte that changes the protein composition of its plasma membrane by exosome formation and extrusion. The types of protein removed differ between species though removal of the transferrin receptor is apparent in mammals and birds.
Descending abdominal aorta
FMAID:3789
Tomasz Adamusiak
Jie Zheng
Abdominal part of aorta
Pars abdominalis aortae[accessedResource: FMAID:3789][accessDate: 04-11-2010]
abdominal aorta
Abdominal part of aorta[accessedResource: FMAID:3789][accessDate: 04-11-2010]
Descending abdominal aorta[accessedResource: FMAID:3789][accessDate: 04-11-2010]
Pars abdominalis aortae
Tomasz Adamusiak
tectal ventricle
ZFA:0000159
Tomasz Adamusiak
ventral mandibular arch
ZFA:0001273
adrenal capsule[accessedResource: BTO:0000047][accessDate: 04-11-2010]
chromafin cell[accessedResource: TAO:0009167][accessDate: 04-11-2010]
MA:0000116
EV:0100135
adrenal medulla cell[accessedResource: TAO:0009167][accessDate: 04-11-2010]
A cell found within the adrenal medulla that secrete biogenic amine hormones upon stimulation.[accessedResource: CL:0000336][accessDate: 04-11-2010]
chromafin cell
XAO:0000164
A cell found within the adrenal medulla that secrete biogenic amine hormones upon stimulation.
Either of a pair of complex endocrine organs near the anterior medial border of the kidney consisting of a mesodermal cortex that produces glucocorticoid, mineralocorticoid, and androgenic hormones and an ectodermal medulla that produces epinephrine and norepinephrine.[accessedResource: BTO:0000047][accessDate: 04-11-2010]
TAO:0009167
EMAPA:18426
adrenal medulla chromaffin cell
Adrenal Glands
atrabiliary capsule[accessedResource: BTO:0000047][accessDate: 04-11-2010]
SAEL:3
adrenal capsule
Suprarenal gland
suprarenal capsule[accessedResource: BTO:0000047][accessDate: 04-11-2010]
Adrenal Glands[accessedResource: NCIt:C12666][accessDate: 04-11-2010]
glandula suprarenalis
MAT:0000071
adrenal[accessedResource: BTO:0000047][accessDate: 04-11-2010]
Adrenals
BTO:0000047
adrenal medulla cell
FMAID:9604
atrabiliary capsule
Suprarenal gland[accessedResource: FMAID:9604][accessDate: 04-11-2010]
A flattened, roughly triangular body resting upon the upper end of each kidney; it is one of the ductless glands furnishing internal secretions (epinephrine and norepinephrine from the medulla and steroid hormones from the cortex).[accessedResource: NCIt:C12666][accessDate: 04-11-2010]
Tomasz Adamusiak
adrenal medulla chromaffin cell[accessedResource: CL:0000336][accessDate: 04-11-2010]
James Malone
NCIt:C12666
epinephros[accessedResource: BTO:0000047][accessDate: 04-11-2010]
glandula suprarenalis[accessedResource: BTO:0000047][accessDate: 04-11-2010]
CL:0000336
Either of a pair of complex endocrine organs near the anterior medial border of the kidney consisting of a mesodermal cortex that produces glucocorticoid, mineralocorticoid, and androgenic hormones and an ectodermal medulla that produces epinephrine and norepinephrine.
suprarenal capsule
epinephros
A flattened, roughly triangular body resting upon the upper end of each kidney; it is one of the ductless glands furnishing internal secretions (epinephrine and norepinephrine from the medulla and steroid hormones from the cortex).
adrenal
adrenal gland
Adrenals[accessedResource: NCIt:C12666][accessDate: 04-11-2010]
Ele Holloway
James Malone
NCI-H1581
Ele Holloway
James Malone
Raji
EV:0100138
MFO:0003240
FMAID:9607
SAEL:107
Thymus gland
EMAPA:18768
ZFA:0001078
MA:0000142
TAO:0001078
Thymus[accessedResource: FMAID:9607][accessDate: 10-05-2010]
EHDAA:9119
true
Thymus
XAO:0000163
Thymus gland[accessedResource: FMAID:9607][accessDate: 10-05-2010]
MAT:0000080
obsolete_thymus
InChIKey=HYAFETHFCAUJAY-PKSOQXRJCR
pioglitazone
5-{4-[2-(5-ethylpyridin-2-yl)ethoxy]benzyl}-1,3-thiazolidine-2,4-dione
A thiazolidenedione that has formula C19H20N2O3S.
C19H20N2O3S
http://www.ebi.ac.uk/efo/EFO_0001592
(+-)-5-((4-(2-(5-ethyl-2-pyridinyl)ethoxy)phenyl)methyl)-2,4-thiazolidinedione
CHEBI:8228
InChI=1/C19H20N2O3S/c1-2-13-3-6-15(20-12-13)9-10-24-16-7-4-14(5-8-16)11-17-18(22)21-19(23)25-17/h3-8,12,17H,2,9-11H2,1H3,(H,21,22,23)/f/h21H
pioglitazona
CCc1ccc(CCOc2ccc(CC3SC(=O)NC3=O)cc2)nc1
pioglitazonum
James Malone
Ele Holloway
James Malone
NCI-H295R
Xanthelasma[accessedResource: DOID:4573][accessDate: 04-11-2010]
Xanthomatous deposition (morphologic abnormality)[accessedResource: DOID:4573][accessDate: 04-11-2010]
Tomasz Adamusiak
xanthoma
DOID:4573
Xanthelasma
Xanthomatous deposition (morphologic abnormality)
Mental Disorder[accessedResource: NIFSTD:birnlex_12669][accessDate: 04-11-2010]
Behavior Disorder
Tomasz Adamusiak
Psychiatric illness or diseases manifested by breakdowns in the adaptational process expressed primarily as abnormalities of thought, feeling, and behavior producing either distress or impairment of function (MeSH).[accessedResource: NIFSTD:birnlex_12669][accessDate: 04-11-2010]
James Malone
Psychiatric Disorder
Psychiatric Disorder[accessedResource: NIFSTD:birnlex_12669][accessDate: 04-11-2010]
Psychiatric illness or diseases manifested by breakdowns in the adaptational process expressed primarily as abnormalities of thought, feeling, and behavior producing either distress or impairment of function (MeSH).
mental or behavioural disorder
Behavior Disorder[accessedResource: NIFSTD:birnlex_12669][accessDate: 04-11-2010]
Mental Disorder
NIFSTD:birnlex_12669
James Malone
Uninfected class is a disposition in which the bearer is not known to be affected by a disease withtin the context of a study
uninfected
CL:0000816
James Malone
immature B cell
immature B-lymphocyte[accessedResource: CL:0000816][accessDate: 04-11-2010]
immature B-lymphocyte
An immature B cell is a precursor B cell that has the phenotype surface IgM-positive and surface IgD-negative, and have not undergone class immunoglobulin class switching or peripheral encounter with antigen and activation.
newly formed B Cell[accessedResource: CL:0000816][accessDate: 04-11-2010]
An immature B cell is a precursor B cell that has the phenotype surface IgM-positive and surface IgD-negative, and have not undergone class immunoglobulin class switching or peripheral encounter with antigen and activation.[accessedResource: CL:0000816][accessDate: 04-11-2010]
newly formed B Cell
GeneRIF:16012335
Precursor cell lymphoblastic leukaemia, not phenotyped
Acute lymphatic leukaemia
Acute lymphoid leukemia, L2 type
ALL - Acute lymphoblastic leukaemia[accessedResource: SNOMEDCT:91857003][accessDate: 04-11-2010]
ALL - Acute Lymphocytic Leukemia
Lymphoblastic leukaemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute Lymphocytic Leukemias[accessedResource: NCIt:C3167][accessDate: 04-11-2010]
Acute lymphocytic leukemia, L2 type
acute lymphocytic leukemia
Lymphoblastic Leukemia
Acute lymphoid leukemia, disease
Acute lymphoblastic leukaemia-lymphoma[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute Lymphogenous Leukemia
Acute lymphoid leukemia, disease[accessedResource: SNOMEDCT:91857003][accessDate: 04-11-2010]
Acute lymphocytic leukaemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute lymphoid leukaemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute lymphoid leukemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute lymphoid leukaemia, disease
Precursor cell lymphoblastic leukemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
FAB L2
Precursor Lymphoblastic Leukemia[accessedResource: NCIt:C3167][accessDate: 04-11-2010]
Acute lymphoblastic leukaemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
GeneRIF:12203795
GeneRIF:16138344
Acute lymphoblastic leukemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute lymphatic leukemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
GeneRIF:15353558
Acute lymphatic leukemia
ACT LYM LEUK W/O RMSION[accessedResource: ICD9:204.00][accessDate: 04-11-2010]
Acute lymphatic leukaemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Precursor cell lymphoblastic leukemia, not phenotyped[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
FAB L2[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Acute lymphoid leukemia, disease (disorder)
GeneRIF:12008081
GeneRIF:11855781
ICD9:204.00
Acute lymphatic leukemia, L2 type
ACT LYM LEUK W/O RMSION
GeneRIF:12854903
Acute lymphoid leukemia, disease (disorder)[accessedResource: SNOMEDCT:91857003][accessDate: 04-11-2010]
Acute lymphatic leukaemia, L2 type
James Malone
Acute lymphoid leukemia
Acute lymphoid leukaemia, L2 type
GeneRIF:14762685
GeneRIF:12142782
[M]Acute lymphoid leukaemia[accessedResource: SNOMEDCT:190034000][accessDate: 04-11-2010]
ALL[accessedResource: NCIt:C3167][accessDate: 04-11-2010]
Acute lymphoid leukemia without mention of remission[accessedResource: SNOMEDCT:91857003][accessDate: 04-11-2010]
GeneRIF:15297414
Leukemia with an acute onset, characterized by the presence of lymphoblasts in the bone marrow and the peripheral blood. It includes the acute B lymphoblastic leukemia and acute T lymphoblastic leukemia.[accessedResource: NCIt:C3167][accessDate: 04-11-2010]
Precursor cell lymphoblastic leukemia, not phenotyped
GeneRIF:15878620
Acute lymphoblastic leukemia-lymphoma
GeneRIF:11964305
NCIt:C3167
Acute lymphoblastic leukaemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Precursor Lymphoblastic Leukemia
GeneRIF:12065898
Acute lymphoblastic leukaemia, precursor-cell type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
GeneRIF:12412576
SNOMEDCT:91857003
Acute lymphoid leukaemia[accessedResource: SNOMEDCT:91857003][accessDate: 04-11-2010]
GeneRIF:12163057
Acute lymphocytic leukaemia, L2 type
[M]Acute lymphoid leukaemia
Acute lymphoblastic leukemia, precursor-cell type
GeneRIF:15604885
Precursor cell lymphoblastic leukemia, no ICD-O subtype (morphologic abnormality)
GeneRIF:14580777
Acute lymphoblastic leukaemia-lymphoma
[M]Acute lymphoid leukemia[accessedResource: SNOMEDCT:190034000][accessDate: 04-11-2010]
GeneRIF:15618957
Precursor cell lymphoblastic leukaemia, not phenotyped[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
GeneRIF:12958073
GeneRIF:12408765
Acute lymphoblastic leukemia, L2 type
GeneRIF:14613996
[M]Acute lymphoid leukemia (morphologic abnormality)[accessedResource: SNOMEDCT:190034000][accessDate: 04-11-2010]
ALL - Acute Lymphocytic Leukemia[accessedResource: NCIt:C3167][accessDate: 04-11-2010]
GeneRIF:14562113
Lymphoblastic leukemia, L2 type
Precursor cell lymphoblastic leukaemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
GeneRIF:12879482
Acute lymphoid leukemia without mention of remission
Lymphoblastic leukemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
GeneRIF:14751048
Lymphoblastic leukaemia, L2 type
Acute lymphocytic leukemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Lymphoblastic leukaemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
ALL - Acute lymphoblastic leukemia[accessedResource: SNOMEDCT:91857003][accessDate: 04-11-2010]
Acute lymphocytic leukaemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
GeneRIF:15390181
Acute Lymphocytic Leukaemia
SNOMEDCT:190034000
Acute lymphoblastic leukaemia
[M]Acute lymphoid leukemia
Lymphoblastic leukemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
ALL - Acute lymphoblastic leukemia
SNOMEDCT:128822004
Acute lymphoblastic leukemia, precursor-cell type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Precursor cell lymphoblastic leukemia (morphologic abnormality)[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
GeneRIF:15717687
Acute lymphoblastic leukaemia, precursor-cell type
GeneRIF:12091359
GeneRIF:15613101
GeneRIF:12532332
Acute lymphoid leukaemia
Acute Lymphogenous Leukemia[accessedResource: NCIt:C3167][accessDate: 04-11-2010]
GeneRIF:12133444
GeneRIF:15001471
Acute Lymphocytic Leukemias
Acute lymphoblastic leukemia-lymphoma[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Precursor cell lymphoblastic leukemia (morphologic abnormality)
Lymphoblastic leukaemia
Acute lymphocytic leukemia, L2 type[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
Precursor cell lymphoblastic leukemia, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
GeneRIF:14706337
Acute lymphoid leukaemia, disease[accessedResource: SNOMEDCT:91857003][accessDate: 04-11-2010]
Precursor Cell Lymphoblastic Leukemia
ICD9:204.0
Acute lymphoblastic leukaemia, L2 type
Precursor cell lymphoblastic leukaemia
[M]Acute lymphoid leukemia (morphologic abnormality)
Acute lymphatic leukaemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
GeneRIF:14959847
Leukemia with an acute onset, characterized by the presence of lymphoblasts in the bone marrow and the peripheral blood. It includes the precursor B lymphoblastic leukemia and precursor T lymphoblastic leukemia.
Acute Lymphoid Leukemia[accessedResource: NCIt:C3167][accessDate: 04-11-2010]
ALL
acute lymphoblastic leukemia
Leukemia with an acute onset, characterized by the presence of lymphoblasts in the bone marrow and the peripheral blood. It includes the acute B lymphoblastic leukemia and acute T lymphoblastic leukemia.
ALL - Acute lymphoblastic leukaemia
Acute lymphatic leukemia[accessedResource: SNOMEDCT:128822004][accessDate: 04-11-2010]
DOID:9952
Tomasz Adamusiak
presumptive forebrain midbrain boundary
ZFA:0001368
aldicarb
(1E)-2-methyl-2-(methylthio)propanal O-[(methylamino)carbonyl]oxime
116-06-3
39
39223
C7H14N2O2S
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#wash_station[accessedResource: MO_626][accessDate: 04-11-2010]
James Malone
A microarray wash station is an instrument used to wash or stain microarrays.
microarray wash station
MO_626
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#wash_station
BTO:0000143
Nucleus of basis pedunculi
James Malone
MAT:0000504
Subdivision of the midbrain anterior to the midbrain tegmentum which contains darkly pigmented neurons.
Soemmering's substance
Soemmering's substance[accessedResource: FMAID:67947][accessDate: 04-11-2010]
The substantia nigra is located in the mesencephalon (mid brain) region of the brain. It is part of the basal ganglia.[accessedResource: BTO:0000143][accessDate: 04-11-2010]
FMAID:67947
MA:0000210
substantia nigra
EV:0100247
Nucleus of basis pedunculi[accessedResource: FMAID:67947][accessDate: 04-11-2010]
The substantia nigra is located in the mesencephalon (mid brain) region of the brain. It is part of the basal ganglia.
James Malone
Ele Holloway
CA46
Ele Holloway
James Malone
Tomasz Adamusiak
thrombin
DSSTox_Generic_SID:40626
James Malone
Cerebellum[accessedResource: NCIt:C22609][accessDate: 10-05-2010]
NCIt:C22609
CNS - Brain - Cerebellum (MMHCC)[accessedResource: NCIt:C22609][accessDate: 10-05-2010]
CNS - Brain - Cerebellum (MMHCC)
true
obsolete_CNS brain cerebellum MMHCC
Obsolete: No longer required in EFO
Cerebellum
kidney derived cell line
James Malone
GM12762
Tomasz Adamusiak
postoptic commissure
ZFA:0000059
GeneRIF:12860021
GeneRIF:15160913
GeneRIF:12700638
GeneRIF:14504101
GeneRIF:12481899
B-cell chronic lymphocytic leukaemia/small lymphocytic lymphoma
GeneRIF:15972449
Chronic lymphoid leukaemia
GeneRIF:15731179
GeneRIF:11042507
GeneRIF:15158092
GeneRIF:15927846
GeneRIF:12763926
B-cell chronic lymphocytic leukemia/small lymphocytic lymphoma (morphologic abnormality)[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:15284121
Chronic lymphocytic leukemia, morphology (morphologic abnormality)[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:15183896
GeneRIF:15175625
B-cell chronic lymphocytic leukemia/small lymphocytic lymphoma[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:11929789
Chronic lymphocytic leukaemia
CLL - Chronic lymphocytic leukaemia
GeneRIF:12010828
GeneRIF:12855567
B-cell chronic lymphocytic leukaemia/small lymphocytic lymphoma[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:15325703
GeneRIF:14692527
GeneRIF:12604404
GeneRIF:14654078
GeneRIF:15759031
GeneRIF:12857600
GeneRIF:11836173
GeneRIF:12359369
GeneRIF:15591116
GeneRIF:12351410
GeneRIF:14687619
Chronic lymphatic leukemia[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:12010662
GeneRIF:12835724
GeneRIF:15613544
GeneRIF:15809452
Chronic lymphoid leukemia, disease[accessedResource: SNOMEDCT:92814006][accessDate: 04-11-2010]
GeneRIF:12100030
GeneRIF:12454749
Chronic lymphatic leukaemia
Chronic lymphocytic leukemia, B-cell type[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:15514014
Chronic lymphatic leukemia
B-cell chronic lymphocytic leukemia/small lymphocytic lymphoma (morphologic abnormality)
GeneRIF:15674425
Chronic lymphocytic leukaemia[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
Chronic lymphoid leukaemia, disease[accessedResource: SNOMEDCT:92814006][accessDate: 04-11-2010]
Chronic lymphocytic leukaemia, B-cell type[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:14689061
GeneRIF:15182336
GeneRIF:15291354
Chronic lymphoid leukemia without mention of remission[accessedResource: SNOMEDCT:92814006][accessDate: 04-11-2010]
GeneRIF:14574328
GeneRIF:12958068
GeneRIF:12447961
Chronic lymphoid leukemia without mention of remission
Chronic lymphoid leukemia
CLL - Chronic lymphocytic leukaemia[accessedResource: SNOMEDCT:92814006][accessDate: 04-11-2010]
chronic lymphocytic leukemia
GeneRIF:12091354
GeneRIF:11986939
GeneRIF:12555221
GeneRIF:11943260
GeneRIF:15802535
GeneRIF:11891278
B-cell chronic lymphocytic leukemia
GeneRIF:15370248
DOID:1040
GeneRIF:15370246
Chronic lymphoid leukaemia[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
Chronic lymphoid leukemia, disease (disorder)
GeneRIF:16014560
Chronic lymphoid leukemia[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:12931211
GeneRIF:16227675
GeneRIF:12592341
GeneRIF:14637279
GeneRIF:14565662
CHR LYM LEUK W/O RMSION
GeneRIF:16295759
GeneRIF:11981828
GeneRIF:15471955
GeneRIF:15052938
CLL
GeneRIF:12127555
GeneRIF:15470489
GeneRIF:15728130
GeneRIF:16103882
Chronic lymphoid leukemia, disease
GeneRIF:15466924
GeneRIF:14592423
James Malone
GeneRIF:12411322
GeneRIF:15385937
GeneRIF:12176902
CLL - Chronic lymphocytic leukemia[accessedResource: SNOMEDCT:92814006][accessDate: 04-11-2010]
GeneRIF:15621797
ICD9:204.10
GeneRIF:12393534
Chronic lymphocytic leukaemia, B-cell type
GeneRIF:12595313
GeneRIF:11839681
GeneRIF:15488762
SNOMEDCT:51092000
Chronic lymphocytic leukemia, B-cell type
GeneRIF:12855573
GeneRIF:12127553
GeneRIF:14996703
GeneRIF:12379312
GeneRIF:12002755
CHR LYM LEUK W/O RMSION[accessedResource: ICD9:204.10][accessDate: 04-11-2010]
GeneRIF:15861184
GeneRIF:12521993
GeneRIF:12187026
GeneRIF:15339846
GeneRIF:12854897
Chronic lymphoid leukemia, disease (disorder)[accessedResource: SNOMEDCT:92814006][accessDate: 04-11-2010]
GeneRIF:15059847
GeneRIF:12480711
Chronic lymphocytic leukemia, morphology (morphologic abnormality)
GeneRIF:15672409
Chronic lymphatic leukaemia[accessedResource: SNOMEDCT:51092000][accessDate: 04-11-2010]
GeneRIF:11986957
B-cell chronic lymphocytic leukemia/small lymphocytic lymphoma
Chronic lymphoid leukaemia, disease
GeneRIF:12011454
GeneRIF:12644014
CLL - Chronic lymphocytic leukemia
GeneRIF:15541476
GeneRIF:14687618
SNOMEDCT:92814006
GeneRIF:12144536
GeneRIF:12393602
ICD9:204.1
mating type alpha
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mating_type_alpha[accessedResource: MO_637][accessDate: 04-11-2010]
PATO:0001344
alpha mating type (yeast)[accessedResource: PATO:0001344][accessDate: 04-11-2010]
James Malone
MO_637
alpha
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mating_type_alpha
A S. cerevisiae mating type cells that secrete a pheromone that stimulates a haploids.[accessedResource: PATO:0001344][accessDate: 04-11-2010]
A S. cerevisiae mating type cells that secrete a pheromone that stimulates a haploids.
alpha mating type (yeast)
alpha[accessedResource: PATO:0001344][accessDate: 04-11-2010]
Homo sapiens cell line
Jie Zheng
Tomasz Adamusiak
aorta endothelium
NCIt:C49190
Human mesothelioma cell line; established from the pleural effusion of a 62-year-old Caucasian man with mesothelioma (malignant biphasic) who did not have any prior therapy.[accessedResource: BTO:0002425][accessDate: 04-11-2010]
BTO:0002425
MSTO-211H cell
James Malone
Human mesothelioma cell line; established from the pleural effusion of a 62-year-old Caucasian man with mesothelioma (malignant biphasic) who did not have any prior therapy.
MSTO-211H
Ele Holloway
MSTO-211H cell[accessedResource: BTO:0002425][accessDate: 04-11-2010]
CRL-2081
James Malone
CS57660 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158684&type=germplasm
CS57660
http://www.arabidopsis.org/servlets/TairObject?id=1005158684&type=germplasm
musculo-skeletal system cell
GeneRIF:15777968
GeneRIF:14576363
SNOMEDCT:190110008
Mesothelioma, unspecified (morphologic abnormality)
A tumor derived from mesothelial tissue (peritoneum, pleura, pericardium). It appears as broad sheets of cells, with some regions containing spindle-shaped, sarcoma-like cells and other regions showing adenomatous patterns. Pleural mesotheliomas have been linked to exposure to asbestos. (Dorland, 27th ed)
SNOMEDCT:62064005
GeneRIF:12082623
A usually malignant and aggressive neoplasm of the mesothelium which is often associated with exposure to asbestos.
Mesothelioma, NOS
Mesothelioma, malignant (morphologic abnormality)[accessedResource: SNOMEDCT:62064005][accessDate: 04-11-2010]
[X]Mesothelioma, unspecified
NCIt:C3234
[X]Mesothelioma, unspecified (disorder)
[X]Mesothelioma, unspecified[accessedResource: SNOMEDCT:190110008][accessDate: 04-11-2010]
[M]Mesothelioma, unspecified (morphologic abnormality)
GeneRIF:15900580
GeneRIF:12082024
SNOMEDCT:189837000
Mesothelioma, malignant[accessedResource: SNOMEDCT:62064005][accessDate: 04-11-2010]
[M]Mesothelioma, unspecified[accessedResource: SNOMEDCT:189837000][accessDate: 04-11-2010]
GeneRIF:14960305
A usually malignant and aggressive neoplasm of the mesothelium which is often associated with exposure to asbestos.[accessedResource: NCIt:C3234][accessDate: 04-11-2010]
GeneRIF:14729617
Mesothelioma, malignant (morphologic abnormality)
[M]Mesothelioma, unspecified (morphologic abnormality)[accessedResource: SNOMEDCT:189837000][accessDate: 04-11-2010]
mesothelioma
Mesotheliomas[accessedResource: MSH:D008654][accessDate: 04-11-2010]
James Malone
DOID:2645
Malignant mesothelioma
[X]Mesothelioma, unspecified (disorder)[accessedResource: SNOMEDCT:190110008][accessDate: 04-11-2010]
Mesotheliomas
Mesothelioma, unspecified (morphologic abnormality)[accessedResource: DOID:2645][accessDate: 04-11-2010]
Mesothelioma, unspecified (disorder)
[M]Mesothelioma, unspecified
A tumor derived from mesothelial tissue (peritoneum, pleura, pericardium). It appears as broad sheets of cells, with some regions containing spindle-shaped, sarcoma-like cells and other regions showing adenomatous patterns. Pleural mesotheliomas have been linked to exposure to asbestos. (Dorland, 27th ed)[accessedResource: MSH:D008654][accessDate: 04-11-2010]
GeneRIF:15334061
Mesothelioma, unspecified (disorder)[accessedResource: DOID:2645][accessDate: 04-11-2010]
Mesothelioma, NOS[accessedResource: DOID:2645][accessDate: 04-11-2010]
GeneRIF:12839939
GeneRIF:15705870
MSH:D008654
GeneRIF:15996160
Internal carotid artery stenosis (disorder)[accessedResource: SNOMEDCT:233964008][accessDate: 04-11-2010]
Internal carotid artery stenosis (disorder)
Tomasz Adamusiak
ICA - Internal carotid artery stenosis[accessedResource: SNOMEDCT:233964008][accessDate: 04-11-2010]
SNOMEDCT:233964008
internal carotid artery stenosis
Ele Holloway
ICA - Internal carotid artery stenosis
http://www.ebi.ac.uk/efo/EFO_0001551
HC toxin
CHEBI:48028
InChI=1/C21H32N4O6/c1-12-18(27)22-13(2)19(28)24-14(7-4-3-5-9-16(26)17-11-31-17)21(30)25-10-6-8-15(25)20(29)23-12/h12-15,17H,3-11H2,1-2H3,(H,22,27)(H,23,29)(H,24,28)/t12-,13+,14-,15+,17?/m0/s1/f/h22-24H
InChIKey=GNYCTMYOHGBSBI-SWJGNPKQDK
[H][C@]12CCCN1C(=O)[C@H](CCCCCC(=O)C1CO1)NC(=O)[C@@H](C)NC(=O)[C@H](C)NC2=O
James Malone
An individual who does some experimental process.
experiment performer
James Malone
Tomasz Adamusiak
BALB/c is a mouse strain of albion mice.
BALB/c
NIFSTD:birnlex_206
http://en.wikipedia.org/wiki/BALB/c
James Malone
GM07357
(13Z)-docos-13-enoic acid
James Malone
3,3,6,6,8a-Pentamethyl-tetrahydro-1,8-dioxa-4a-aza-naphthalene
erucic acid
http://www.ebi.ac.uk/efo/EFO_0001878
InChI=1/C12H23NO2/c1-10(2)6-13-7-11(3,4)9-15-12(13,5)14-8-10/h6-9H2,1-5H3
An oxazinooxazine that has formula C12H23NO2.
C12H23NO2
3,3,7,7,9a-pentamethyltetrahydro-2H,6H-[1,3]oxazino[2,3-b][1,3]oxazine
InChIKey=HXCGBGUJRISVDD-UHFFFAOYAH
3,3,6,6,8a-pentamethyltetrahydro-1,8-dioxa-4a-azanaphthalene
3,3,6,6,8a-pentamethyl-1,8-dioxaquinolizidine
A docosenoic acid that has formula C22H42O2.
CC1(C)COC2(C)OCC(C)(C)CN2C1
CHEBI:4836
amphiprotic solvent
James Malone
blastula sphere
ZFS:0000014
Tomasz Adamusiak
pars intercerebralis primordium
FBbt:00005511
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#software_manufacturer[accessedResource: MO_475][accessDate: 04-11-2010]
Tomasz Adamusiak
software manufacturer
MO_475
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#software_manufacturer
Jie Zheng
Tomasz Adamusiak
embryonic day 18.5
Ele Holloway
James Malone
5637
James Malone
CS57603 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158627&type=germplasm
CS57603
http://www.arabidopsis.org/servlets/TairObject?id=1005158627&type=germplasm
Innominate artery
Jie Zheng
FMAID:3932
Innominate artery[accessedResource: FMAID:3932][accessDate: 04-11-2010]
Brachiocephalic trunk
Tomasz Adamusiak
brachiocephalic artery
Brachiocephalic trunk[accessedResource: FMAID:3932][accessDate: 04-11-2010]
MCC:0000457
T98G cell[accessedResource: BTO:0001583][accessDate: 04-11-2010]
T-98G cell[accessedResource: BTO:0001583][accessDate: 04-11-2010]
BTO:0001583
T98G
James Malone
T-98G cell
Human, Caucasian, glioblastoma cell line.[accessedResource: BTO:0001583][accessDate: 04-11-2010]
Ele Holloway
Human, Caucasian, glioblastoma cell line.
T98G cell
A convenient source of human endothelial cells are those that line the large vein in the umbilical cord which is usually discarded together with the placenta after childbirth. The cells can be removed as a fairly pure suspension by mild enzymatic treatment of the vein followed by some mechanical distraction and will grow relatively easily in culture, retaining their differentiated characteristics for several passages.
HUVEC cell
A convenient source of human endothelial cells are those that line the large vein in the umbilical cord which is usually discarded together with the placenta after childbirth. The cells can be removed as a fairly pure suspension by mild enzymatic treatment of the vein followed by some mechanical distraction and will grow relatively easily in culture, retaining their differentiated characteristics for several passages.[accessedResource: BTO:0001949][accessDate: 04-11-2010]
HUVEC[accessedResource: BTO:0001949][accessDate: 04-11-2010]
Tomasz Adamusiak
BTO:0001949
HUVEC
human umbilical vein endothelial cell[accessedResource: BTO:0001949][accessDate: 04-11-2010]
human umbilical vein endothelial cell
assay by molecule
Collective designation for those tissues capable of secreting hormones.
FMAID:9668
endocrine system
Endocrine system (all sites)[accessedResource: NCIt:C12705][accessDate: 04-11-2010]
NCIt:C12705
Endocrine/Metabolic Organ System
Metabolic/Endocrine Body System
Body System, Endocrine/Metabolic[accessedResource: NCIt:C12705][accessDate: 04-11-2010]
Systema endocrinum
Systema endocrinum[accessedResource: FMAID:9668][accessDate: 04-11-2010]
Endocrine system (all sites)
Collective designation for those tissues capable of secreting hormones.[accessedResource: NCIt:C12705][accessDate: 04-11-2010]
Hormonal System[accessedResource: NCIt:C12705][accessDate: 04-11-2010]
Hormonal System
Endocrine/Metabolic Organ System[accessedResource: NCIt:C12705][accessDate: 04-11-2010]
James Malone
true
Strain or line specific to mouse
2.0.1
consolidation of strains with organism taxon. mouse strain subclasses are moved to mus musculus subclasses
obsolete_mouse strain
James Malone
CS57758 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158782&type=germplasm
CS57758
http://www.arabidopsis.org/servlets/TairObject?id=1005158782&type=germplasm
James Malone
GM06985
Ele Holloway
James Malone
DMS53
DMS-53
Jie Zheng
Tomasz Adamusiak
embryonic day 18
Denotes a person having origins in any of the original peoples of Hawaii, Guam, Samoa, or other Pacific Islands. The term covers particularly people who identify themselves as part-Hawaiian, Native Hawaiian, Guamanian or Chamorro, Carolinian, Samoan, Chuukese (Trukese), Fijian, Kosraean, Melanesian, Micronesian, Northern Mariana Islander, Palauan, Papua New Guinean, Pohnpeian, Polynesian, Solomon Islander, Tahitian, Tokelauan, Tongan, Yapese, or Pacific Islander, not specified.[accessedResource: NCIt:C41219][accessDate: 04-11-2010]
Native Hawaiian or Other Pacific Islander[accessedResource: NCIt:C41219][accessDate: 04-11-2010]
Tomasz Adamusiak
Denotes a person having origins in any of the original peoples of Hawaii, Guam, Samoa, or other Pacific Islands. The term covers particularly people who identify themselves as part-Hawaiian, Native Hawaiian, Guamanian or Chamorro, Carolinian, Samoan, Chuukese (Trukese), Fijian, Kosraean, Melanesian, Micronesian, Northern Mariana Islander, Palauan, Papua New Guinean, Pohnpeian, Polynesian, Solomon Islander, Tahitian, Tokelauan, Tongan, Yapese, or Pacific Islander, not specified.
Asian/Pacific Islander
NCIt:C41219
Native Hawaiian or Other Pacific Islander
CHEBI:25355
James Malone
http://www.ebi.ac.uk/efo/EFO_0001827
mitochondrial respiratory-chain inhibitor
mitochondrial electron transport chain inhibitors
mitochondrial electron-transport chain inhibitor
mitochondrial respiratory chain inhibitors
Atrioventricular nodal muscle tissue[accessedResource: FMAID:9478][accessDate: 04-11-2010]
MA:0000095
James Malone
Node of Tawara
Portion of the somite giving rise to body wall muscle masses.[accessedResource: ZFA:0000044][accessDate: 04-11-2010]
Atrioventricular nodal muscle tissue
atriovetricular node
A-V Node
TAO:0005070
ZFA:0000044
MAT:0000498
myotome somite 14
AV nodal muscle tissue
AV nodal muscle tissue[accessedResource: FMAID:9478][accessDate: 04-11-2010]
Aschoff-Tawara node[accessedResource: FMAID:9478][accessDate: 04-11-2010]
myotome somite 14[accessedResource: ZFA:0000044][accessDate: 04-11-2010]
atrioventricular node
Subdivision of conducting system of heart which is located in the muscular part of the interatrial septum that is continuous with the atrioventricular bundle.
AV node[accessedResource: FMAID:9478][accessDate: 04-11-2010]
Node of Tawara[accessedResource: FMAID:9478][accessDate: 04-11-2010]
A-V Node[accessedResource: NCIt:C32161][accessDate: 04-11-2010]
atriovetricular node[accessedResource: TAO:0005070][accessDate: 04-11-2010]
FMAID:9478
AV node
Portion of the somite giving rise to body wall muscle masses.
Aschoff-Tawara node
NCIt:C32161
cholic acid
81-25-4
James Malone
deltoid
NCIt:C32446
Tomasz Adamusiak
floor plate rhombomere 1
ZFA:0000882
James Malone
267B1 Ki-ras
(3R,4aS,5S,6S,6aS,10aS,10bR)-3-ethenyl-6-hydroxy-3,4a,7,7,10a-pentamethyl-1-oxododecahydro-1H-benzo[f]chromen-5-yl acetate
7beta-acetoxy-8,13-epoxy-6beta-hydroxylabd-14-en-11-one
CHEBI:50295
InChIKey=ZKZMDXUDDJYAIB-SUCLLAFCBT
James Malone
[H][C@@]12[C@H](O)[C@H](OC(C)=O)[C@@]3(C)O[C@](C)(CC(=O)[C@]3([H])[C@@]1(C)CCCC2(C)C)C=C
A labdane diterpenoid that has formula C22H34O5.
C22H34O5
(3R-(3alpha,4abeta,5beta,6beta,6aalpha,10abeta,10balpha))-5-(acetyloxy)-3-ethenyldodecahydro-6-hydroxy-3,4a,7,7,10a-pentamethyl-1H-naphtho(2,1-b)pyran-1-one
Ele Holloway
(3R,4aS,5S,6S,6aS,10aS,10bR)-5-(acetyloxy)-3-ethenyldodecahydro-6-hydroxy-3,4a,7,7,10a-pentamethyl-1H-naphtho(2,1-b)pyran-1-one
InChI=1/C22H34O5/c1-8-20(5)12-14(24)16-21(6)11-9-10-19(3,4)17(21)15(25)18(26-13(2)23)22(16,7)27-20/h8,15-18,25H,1,9-12H2,2-7H3/t15-,16+,17-,18-,20-,21+,22-/m0/s1
1,9-dideoxyforskolin
http://www.ebi.ac.uk/efo/EFO_0002484
astrocyte
A class of large neuroglial (macroglial) cells in the central nervous system - the largest and most numerous neuroglial cells in the brain and spinal cord. Astrocytes (from "star" cells) are irregularly shaped with many long processes, including those with "end feet" which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and "reactive astrocytes" (along with microglia) respond to injury (MSH).
NIFSTD:sao1394521419
Tomasz Adamusiak
CL:0000127
cells) are irregularly shaped with many long processes, including those with "end feet" which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and
A class of large neuroglial (macroglial) cells in the central nervous system - the largest and most numerous neuroglial cells in the brain and spinal cord. Astrocytes (from 'star' cells) are irregularly shaped with many long processes, including those with 'end feet' which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and 'reactive astrocytes' (along with microglia) respond to injury.
A class of large neuroglial (macroglial) cells in the central nervous system - the largest and most numerous neuroglial cells in the brain and spinal cord. Astrocytes (from 'star' cells) are irregularly shaped with many long processes, including those with 'end feet' which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and 'reactive astrocytes' (along with microglia) respond to injury.[accessedResource: CL:0000127][accessDate: 04-11-2010]
A class of large neuroglial (macroglial) cells in the central nervous system - the largest and most numerous neuroglial cells in the brain and spinal cord. Astrocytes (from "star" cells) are irregularly shaped with many long processes, including those with "end feet" which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and "reactive astrocytes" (along with microglia) respond to injury (MSH).[accessedResource: NIFSTD:sao1394521419][accessDate: 04-11-2010]
James Malone
Ele Holloway
James Malone
Malme3M
Ele Holloway
James Malone
COLO201
Tomasz Adamusiak
CMK
MCC:0000105
TH-2
James Malone
leaf's response to physical damage by a caterpillar on a plant leaf
Physiological response to e.g. leaf's response to physical damage by a caterpillar on a plant leaf
damage response
Nodose ganglion
Vagus nerve nodose ganglion
FMA:6230
Tenth cranial nerve nodose ganglion
Inferior ganglion of vagus
Vagus nerve inferior ganglion
James Malone
Ganglion inferius (Nervus vagus)
Ele Holloway
inferior ganglion of vagus nerve
Tomasz Adamusiak
palatoquadrate arch
ZFA:0001272
Ele Holloway
James Malone
COLO668
Ele Holloway
James Malone
NCI-H1436
James Malone
Limbus of cornea
Sclerocorneal junction
Corneoscleral junction[accessedResource: FMA:58342][accessDate: 04-11-2010]
FMA:58342
Corneoscleral Limbus
Corneoscleral Limbus[accessedResource: NCIt:C12823][accessDate: 04-11-2010]
corneal limbus
NCIt:C12823
Corneoscleral junction
Tomasz Adamusiak
Eukarya
Eukaryota
Eucaryotae[accessedResource: NIFSTD:birnlex_399][accessDate: 04-11-2010]
NIFSTD:birnlex_399
http://www.ebi.ac.uk/efo/EFO_0001449
Eucaryotae
eucaryotes
Eukarya[accessedResource: NIFSTD:birnlex_399][accessDate: 04-11-2010]
eucaryotes[accessedResource: NIFSTD:birnlex_399][accessDate: 04-11-2010]
James Malone
nervous system cell
HCC1937
James Malone
A female germ cell that has entered meiosis.[accessedResource: CL:0000023][accessDate: 04-11-2010]
Tomasz Adamusiak
A female germ cell that has entered meiosis.
oocyte
CL:0000023
Ele Holloway
James Malone
Tomasz Adamusiak
diquat
CASRN:85-00-7
Ele Holloway
James Malone
SKUT1
Ele Holloway
James Malone
true
1.8
Duplicate use EFO_0001260
obsolete_Wi38
embryo late (growth) stage[accessedResource: MAT:0000399][accessDate: 04-11-2010]
embryo late (growth) stage
fetus
James Malone
MAT:0000399
EV:0300011
EVM:2990031
FBdv:0005333
James Malone
CB6F1 is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/100007.html
CB6F1
JAX:100007
Tomasz Adamusiak
ILSXISS110/TejJ
http://jaxmice.jax.org/strain/009291.html
GeneRIF:15556610
MSH:D015464
Chronic Myeloid Leukemias[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:15626746
GeneRIF:12393722
Myeloid Leukemia, chronic[accessedResource: DOID:8552][accessDate: 10-05-2010]
GeneRIF:12130516
Leukemia, Chronic Granulocytic[accessedResource: MSH:D015464][accessDate: 10-05-2010]
chronic myeloid leukemia, disease (disorder)[accessedResource: DOID:8552][accessDate: 10-05-2010]
chronic myeloid leukemia without mention of remission
chronic myeloid leukemia NOS (disorder)
chronic myeloid leukemia in remission[accessedResource: DOID:8552][accessDate: 10-05-2010]
chronic myeloid leukemia in remission
ICD9:205.1
CML in Remission[accessedResource: DOID:8552][accessDate: 10-05-2010]
Leukemias, Chronic Myelocytic[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:12821944
Granulocytic Leukemias, Chronic
Leukemia, Myelogenous, Chronic, BCR-ABL Positive
Leukemia, Myelogenous, Chronic, BCR-ABL Positive[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Leukemia, Ph1-Positive Myelogenous[accessedResource: MSH:D015464][accessDate: 10-05-2010]
DOID:8552
GeneRIF:12505259
CML[accessedResource: DOID:8552][accessDate: 10-05-2010]
GeneRIF:14656881
chronic myeloid leukemia without mention of remission[accessedResource: DOID:8552][accessDate: 10-05-2010]
Myelogenous Leukemias, Ph1-Positive[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Chronic Myelocytic Leukemia[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Myelogenous Leukemias, Chronic[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:15481444
GeneRIF:14523459
GeneRIF:15167915
Chronic Myelocytic Leukemias
GeneRIF:14586403
GeneRIF:15569990
Leukemias, Ph1-Positive Myeloid[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Myelogenous Leukemias, Chronic
chronic myeloid leukaemia
GeneRIF:15583852
chronic myeloid leukemia in remission (disorder)[accessedResource: DOID:8552][accessDate: 10-05-2010]
Leukemias, Chronic Myeloid
GeneRIF:11937267
GeneRIF:12734675
James Malone
GeneRIF:15735728
GeneRIF:12576338
Clonal hematopoetic disorder caused by an acquired genetic defect in PLURIPOTENT STEM CELLS. It starts in MYELOID CELLS of the bone marrow, invades the blood and then other organs. The condition progresses from a stable, more indolent, chronic phase (LEUKEMIA, MYELOID, CHRONIC PHASE) lasting up to 7 years, to an advanced phase composed of an accelerated phase (LEUKEMIA, MYELOID, ACCELERATED PHASE) and BLAST CRISIS.
Leukemia, Myeloid, Philadelphia Positive[accessedResource: MSH:D015464][accessDate: 10-05-2010]
chronic myeloid leukemia in remission (disorder)
Leukemia, Myeloid, Ph1 Positive[accessedResource: MSH:D015464][accessDate: 10-05-2010]
CML - chronic Myelogenous Leukemia
GeneRIF:12144533
chronic myeloid leukemia, disease (disorder)
Obsolete: Duplication: use EFO_0000339 instead
GeneRIF:11830496
CML - chronic Myelogenous Leukemia[accessedResource: DOID:8552][accessDate: 10-05-2010]
Leukemia, Myelogenous, Chronic[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Clonal hematopoetic disorder caused by an acquired genetic defect in PLURIPOTENT STEM CELLS. It starts in MYELOID CELLS of the bone marrow, invades the blood and then other organs. The condition progresses from a stable, more indolent, chronic phase (LEUKEMIA, MYELOID, CHRONIC PHASE) lasting up to 7 years, to an advanced phase composed of an accelerated phase (LEUKEMIA, MYELOID, ACCELERATED PHASE) and BLAST CRISIS.[accessedResource: MSH:D015464][accessDate: 10-05-2010]
CML in Remission
Ph1-Positive Myeloid Leukemias
GeneRIF:12351404
GeneRIF:15388581
GeneRIF:15213099
GeneRIF:12964051
Leukemia, Myelocytic, Chronic
GeneRIF:11861294
GeneRIF:12408765
Myeloid Leukemia, Chronic
true
chronic myelogenous leukemia, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:8552][accessDate: 10-05-2010]
chronic myeloid leukaemia[accessedResource: DOID:8552][accessDate: 10-05-2010]
chronic myeloid leukemia NOS (disorder)[accessedResource: DOID:8552][accessDate: 10-05-2010]
LEUKEMIA PHILA POS
GeneRIF:15716990
Myelogenous Leukemias, Ph1-Positive
Myeloid Leukemias, Philadelphia-Positive
GeneRIF:16361542
CML
Chronic Granulocytic Leukemia
Chronic Granulocytic Leukemias[accessedResource: MSH:D015464][accessDate: 10-05-2010]
Myeloid Leukemia, Philadelphia-Positive
Leukemias, Philadelphia-Positive Myeloid[accessedResource: MSH:D015464][accessDate: 10-05-2010]
GeneRIF:15621754
GeneRIF:15790787
Leukemia, Myeloid, Ph1 Positive
obsolete_chronic myeloid leukemia
GeneRIF:12576428
Myelogenous Leukemia, Chronic
Leukemia, Myelogenous, Ph1-Positive
GeneRIF:12740446
GeneRIF:15676212
chronic myelogenous leukemia, no ICD-O subtype (morphologic abnormality)
LEUKEMIA PHILA POS[accessedResource: MSH:D015464][accessDate: 10-05-2010]
HTLV-III-LAV Infection[accessedResource: MSH:D015658][accessDate: 04-11-2010]
Human immunodeficiency virus infection[accessedResource: DOID:526][accessDate: 04-11-2010]
GeneRIF:12531788
HUMAN IMMUNOdeficiency VIRUS [HIV] INFECTION
GeneRIF:12515722
Human immunodeficiency virus disease (disorder)
T LYMPHOTROPIC VIRUS TYPE III INFECT HUMAN
GeneRIF:12769187
GeneRIF:15555533
GeneRIF:15057492
GeneRIF:15265023
NCIt:C3108
GeneRIF:11709782
GeneRIF:12639246
[X]Human immunodeficiency virus disease (disorder)[accessedResource: SNOMEDCT:187438009][accessDate: 04-11-2010]
GeneRIF:12427285
Infections, HTLV-III
GeneRIF:12514416
GeneRIF:12767990
GeneRIF:15864119
Human immunodeficiency virus disease (disorder)[accessedResource: DOID:526][accessDate: 04-11-2010]
GeneRIF:12586555
Human immunodeficiency virus [HIV] disease
GeneRIF:14554087
GeneRIF:11801693
GeneRIF:14985764
GeneRIF:12202149
HTLV-III-LAV Infection
HTLV III INFECT[accessedResource: MSH:D015658][accessDate: 04-11-2010]
Infections, HTLV-III-LAV[accessedResource: MSH:D015658][accessDate: 04-11-2010]
GeneRIF:15661918
[X]Unspecified human immunodeficiency virus [HIV] disease (disorder)[accessedResource: SNOMEDCT:187453001][accessDate: 04-11-2010]
Human immunodeficiency virus [HIV] disease[accessedResource: DOID:526][accessDate: 04-11-2010]
GeneRIF:15985194
GeneRIF:14764743
GeneRIF:16081817
GeneRIF:12960279
GeneRIF:11834941
[X]Human immunodeficiency virus disease (disorder)
GeneRIF:12884293
ICD9:042
GeneRIF:11466339
GeneRIF:15242539
GeneRIF:12192009
HIV Infection[accessedResource: MSH:D015658][accessDate: 04-11-2010]
Infections, HTLV-III-LAV
HTLV WIII INFECTIONS
GeneRIF:15297876
GeneRIF:12679439
GeneRIF:15128805
Unspecified human immunodeficiency virus [HIV] disease (disorder)
LYMPHOTROPIC VIRUS TYPE III INFECTIONS HUMAN T[accessedResource: MSH:D015658][accessDate: 04-11-2010]
GeneRIF:15751767
GeneRIF:15564514
HIV INFECT[accessedResource: MSH:D015658][accessDate: 04-11-2010]
GeneRIF:12645627
GeneRIF:12834106
GeneRIF:15319853
Human immunodeficiency virus disease
Human immunodeficiency virus infection (disorder)
HIV
GeneRIF:12713059
GeneRIF:12552446
HUMAN IMMUNO VIRUS DIS
GeneRIF:12829794
T LYMPHOTROPIC VIRUS TYPE III INFECT HUMAN[accessedResource: MSH:D015658][accessDate: 04-11-2010]
GeneRIF:12847229
GeneRIF:15018667
James Malone
Human immunodeficiency virus infection (disorder)[accessedResource: SNOMEDCT:86406008][accessDate: 04-11-2010]
Human immunodeficiency virus disease[accessedResource: DOID:526][accessDate: 04-11-2010]
HTLV WIII LAV INFECTIONS
GeneRIF:15541354
An infection caused by the human immunodeficiency virus.[accessedResource: NCIt:C3108][accessDate: 04-11-2010]
GeneRIF:12051740
HTLV WIII INFECTIONS[accessedResource: MSH:D015658][accessDate: 04-11-2010]
Human immunodeficiency virus infection
GeneRIF:15556689
Human immunodeficiency virus infection, NOS
GeneRIF:12513914
GeneRIF:15737629
GeneRIF:12751031
GeneRIF:12610138
GeneRIF:12964117
T Lymphotropic Virus Type III Infections, Human
GeneRIF:12900520
An infection caused by the human immunodeficiency virus.
GeneRIF:14501804
HTLV III LAV INFECT
GeneRIF:12803993
GeneRIF:16284526
GeneRIF:15156567
GeneRIF:15879099
[X]Human immunodeficiency virus disease[accessedResource: SNOMEDCT:187438009][accessDate: 04-11-2010]
HTLV III INFECT
GeneRIF:12619446
HIV infectious disease[accessedResource: DOID:526][accessDate: 04-11-2010]
HIV Infection
GeneRIF:15452260
GeneRIF:12220649
GeneRIF:15192272
GeneRIF:12131187
GeneRIF:15596839
HIV infectious disease
[X]Unspecified human immunodeficiency virus [HIV] disease[accessedResource: SNOMEDCT:187453001][accessDate: 04-11-2010]
HTLV-III Infection
GeneRIF:16156786
GeneRIF:14687494
GeneRIF:12594292
Unspecified human immunodeficiency virus [HIV] disease (disorder)[accessedResource: DOID:526][accessDate: 04-11-2010]
GeneRIF:15741250
GeneRIF:15829920
GeneRIF:15326605
MSH:D015658
GeneRIF:12640191
HUMAN IMMUNO VIRUS DIS[accessedResource: ICD9:042][accessDate: 04-11-2010]
[X]Unspecified human immunodeficiency virus [HIV] disease
GeneRIF:15272203
GeneRIF:15535131
GeneRIF:11466389
SNOMEDCT:187438009
GeneRIF:12639247
GeneRIF:11932418
GeneRIF:12100031
HTLV III LAV INFECT[accessedResource: MSH:D015658][accessDate: 04-11-2010]
GeneRIF:12473840
DOID:526
GeneRIF:14501803
SNOMEDCT:86406008
HUMAN IMMUNODEFICIENCY VIRUS [HIV] INFECTION[accessedResource: ICD9:042-042.99][accessDate: 04-11-2010]
human immunodeficiency virus
GeneRIF:15181567
Infections, HIV
[X]Unspecified human immunodeficiency virus [HIV] disease (disorder)
GeneRIF:12167863
Includes the spectrum of human immunodeficiency virus infections that range from asymptomatic seropositivity, thru AIDS-related complex (ARC), to acquired immunodeficiency syndrome (AIDS).[accessedResource: MSH:D015658][accessDate: 04-11-2010]
HIV Infections[accessedResource: MSH:D015658][accessDate: 04-11-2010]
GeneRIF:15708596
GeneRIF:14645006
GeneRIF:12767998
Includes the spectrum of human immunodeficiency virus infections that range from asymptomatic seropositivity, thru AIDS-related complex (ARC), to acquired immunodeficiency syndrome (AIDS).
GeneRIF:12510154
GeneRIF:15869407
GeneRIF:16015368
Infection, HTLV-III[accessedResource: MSH:D015658][accessDate: 04-11-2010]
GeneRIF:16136472
GeneRIF:15175077
GeneRIF:14983032
GeneRIF:12468426
GeneRIF:11862398
ICD9:042-042.99
GeneRIF:11983108
GeneRIF:15585099
GeneRIF:15702055
GeneRIF:12237292
GeneRIF:11861282
GeneRIF:15117454
SNOMEDCT:187453001
HIV INFECT
GeneRIF:15735450
HTLV WIII LAV INFECTIONS[accessedResource: MSH:D015658][accessDate: 04-11-2010]
HTLV-III Infections[accessedResource: MSH:D015658][accessDate: 04-11-2010]
GeneRIF:11937573
GeneRIF:14978126
GeneRIF:12482395
GeneRIF:12757260
GeneRIF:12193696
GeneRIF:15660419
GeneRIF:14502291
GeneRIF:14688346
GeneRIF:12368356
[X]Human immunodeficiency virus disease
GeneRIF:15466648
GeneRIF:15821887
Human immunodeficiency virus infection, NOS[accessedResource: SNOMEDCT:86406008][accessDate: 04-11-2010]
GeneRIF:12815099
GeneRIF:14984591
James Malone
cleavage 16-cell
ZFS:0000005
Natural Language Generator 8th April 2010
A GATA-1-null erythroblast is a cell line.
A g1e er4 is a GATA-1-null erythroblast.
GATA-1-null erythroblast cell line
G1E
DSSTox_Generic_SID:42594
ritanserin
STRUCTURE_ChemicalName_IUPAC:6-(2-{4-[bis(4-fluorophenyl)methylidene]piperidin-1-yl}ethyl)-7-methyl-5H-[1,3]thiazolo[3,2-a]pyrimidin-5-one
STRUCTURE_Formula:C27H25F2N3OS
Ele Holloway
James Malone
DSSTox_CID:22594
Tomasz Adamusiak
CASRN:87051-43-2
UO:0000031
true
min
James Malone
A minute is a derived time unit which is equal to 60 seconds.
http://www.ebi.ac.uk/efo/EFO_0001791
minute
A time unit which is equal to 60 seconds.
cancer site
Tomasz Adamusiak
MO_26
James Malone
This will be obsoleted in near future.
Location of cancer, primary or metastatic
Jie Zheng
Ele Holloway
James Malone
NCI-H2009
James Malone
CS57710 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158734&type=germplasm
CS57710
http://www.arabidopsis.org/servlets/TairObject?id=1005158734&type=germplasm
Tomasz Adamusiak
median fin fold
ZFA:0000040
James Malone
http://www.ebi.ac.uk/efo/EFO_0002640
Gallus gallus
chicken
red junglefowl
carbamazepine
298-46-4
MAT:0000181
MA:0000292
Shoulder girdle
EMAPA:18025
Subdivision of free upper limb, which is the proximal segment of an upper limb and links the free upper limb to the trunk; it is demarcated by the plane of the surface of the glenoid fossa from the free upper limb; together with the free upper limb, it constitutes the upper limb. Examples: There are only two instances, right and left pectoral girdles.
EHDAA:6039
shoulder bones
shoulder bones[accessedResource: MAT:0000181][accessDate: 04-11-2010]
Shoulder girdle[accessedResource: FMAID:23217][accessDate: 04-11-2010]
James Malone
FMAID:23217
pectoral girdle
Upper limb girdle
Upper limb girdle[accessedResource: FMAID:23217][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0002654
Rattus rattus
black rat
house rat
roof rat
true
obsolete_clinical information
fluconazole
2-(2,4-difluorophenyl)-1,3-di-1H-1,2,4-triazol-1-ylpropan-2-ol
20627
627
86386-73-4
C13H12F2N6O
24Cr
James Malone
A chromium group element atom that has formula Cr.
cromo
[Cr]
chrome
A chromium group element that has formula Cr.
CHEBI:28073
chromium atom
InChI=1/Cr
Chrom
chromium
InChIKey=VYZAMTAEIAYCRO-UHFFFAOYAB
http://www.ebi.ac.uk/efo/EFO_0001505
A clear, watery, sometimes faintly yellowish fluid derived from body tissues that contains white blood cells and circulates throughout the lymphatic system, returning to the venous bloodstream through the thoracic duct. Lymph acts to remove bacteria and certain proteins from the tissues, transport fat from the small intestine, and supply mature lymphocytes to the blood.[accessedResource: BTO:0000855][accessDate: 04-11-2010]
Transudate contained in the lumen of lymphatic vessel.
James Malone
A clear, watery, sometimes faintly yellowish fluid derived from body tissues that contains white blood cells and circulates throughout the lymphatic system, returning to the venous bloodstream through the thoracic duct. Lymph acts to remove bacteria and certain proteins from the tissues, transport fat from the small intestine, and supply mature lymphocytes to the blood.
EV:0100049
MAT:0000055
lymph
BTO:0000855
MA:0002520
FMAID:9671
urocortin II
James Malone
R43
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#operon_identification_design[accessedResource: MO_772][accessDate: 04-11-2010]
Tomasz Adamusiak
operon identification design
MO_772
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#operon_identification_design
Natural Language Generator 8th April 2010
A NCI H929 is a cell line.
A NCI H929 is all of the following: something that is bearer of a multiple myeloma, something that derives
from a B cell, and something that derives from a bone marrow.
James Malone
NCI-H929
A sarcoma originating in bone-forming cells, affecting the ends of long bones. It is the most common and most malignant of sarcomas of the bones, and occurs chiefly among 10- to 25-year-old youths. (From Stedman, 25th ed)[accessedResource: MSH:D012516][accessDate: 04-11-2010]
Osteosarcomas
Osteosarcoma - disorder
[M]Osteosarcoma NOS
GeneRIF:12154052
SNOMEDCT:307576001
GeneRIF:15488761
Osteosarcoma, no ICD-O subtype
GeneRIF:15870699
GeneRIF:15026342
GeneRIF:11920494
osteoid sarcoma[accessedResource: DOID:3347][accessDate: 04-11-2010]
Osteosarcoma - disorder[accessedResource: SNOMEDCT:307576001][accessDate: 04-11-2010]
Osteogenic Sarcomas[accessedResource: MSH:D012516][accessDate: 04-11-2010]
MSH:D012516
GeneRIF:12393937
GeneRIF:15668906
GeneRIF:12972634
Osteoblastic sarcoma
GeneRIF:12663494
Sarcoma of Bone[accessedResource: NCIt:C9312][accessDate: 04-11-2010]
GeneRIF:15922739
GeneRIF:12054567
Sarcomas, Osteogenic
osteoid sarcoma
A sarcoma originating in bone-forming cells, affecting the ends of long bones. It is the most common and most malignant of sarcomas of the bones, and occurs chiefly among 10- to 25-year-old youths. (From Stedman, 25th ed)
Osteogenic sarcoma, NOS[accessedResource: SNOMEDCT:21708004][accessDate: 04-11-2010]
SNOMEDCT:21708004
Osteosarcoma, NOS[accessedResource: SNOMEDCT:21708004][accessDate: 04-11-2010]
NCIt:C9145
GeneRIF:15201972
GeneRIF:11606061
Osteogenic Sarcoma[accessedResource: MSH:D012516][accessDate: 04-11-2010]
Osteosarcoma of bone
Osteosarcoma, NOS
GeneRIF:15145525
Osteochondrosarcoma
GeneRIF:15719069
GeneRIF:15701832
GeneRIF:14524531
A usually aggressive malignant bone-forming mesenchymal tumor, predominantly affecting adolescents and young adults. It usually involves bones and less frequently extraosseous sites. It often involves the long bones (particularly distal femur, proximal tibia, and proximal humerus). Pain with or without a palpable mass is the most frequent clinical symptom. It may spread to other anatomic sites, particularly the lungs.
Sarcoma of Bone
GeneRIF:11776394
osteosarcoma
Osteosarcoma of bone (disorder)[accessedResource: SNOMEDCT:307576001][accessDate: 04-11-2010]
GeneRIF:14598886
A malignant mesenchymal tumor arising from the bone.
GeneRIF:14704791
GeneRIF:12709413
Osteosarcoma, no ICD-O subtype (morphologic abnormality)
Bone Sarcoma[accessedResource: NCIt:C9312][accessDate: 04-11-2010]
GeneRIF:12788094
Skeletal Sarcoma
GeneRIF:14528100
GeneRIF:15580288
GeneRIF:12544770
GeneRIF:12660817
GeneRIF:15900593
GeneRIF:15476586
GeneRIF:12209731
GeneRIF:15796961
Osteochondrosarcoma[accessedResource: SNOMEDCT:21708004][accessDate: 04-11-2010]
GeneRIF:14710359
GeneRIF:16157226
GeneRIF:14645574
GeneRIF:15448009
GeneRIF:12376862
Osseous Sarcoma
GeneRIF:15087387
GeneRIF:11943335
GeneRIF:14584080
Osteosarcoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:3347][accessDate: 04-11-2010]
A usually aggressive malignant bone-forming mesenchymal tumor, predominantly affecting adolescents and young adults. It usually involves bones and less frequently extraosseous sites. It often involves the long bones (particularly distal femur, proximal tibia, and proximal humerus). Pain with or without a palpable mass is the most frequent clinical symptom. It may spread to other anatomic sites, particularly the lungs.[accessedResource: NCIt:C9145][accessDate: 04-11-2010]
Osteosarcoma of bone[accessedResource: SNOMEDCT:307576001][accessDate: 04-11-2010]
GeneRIF:12009018
Skeletal Sarcoma[accessedResource: NCIt:C9312][accessDate: 04-11-2010]
GeneRIF:15583032
GeneRIF:12479099
Osteosarcoma, no ICD-O subtype[accessedResource: SNOMEDCT:21708004][accessDate: 04-11-2010]
Osteoblastic sarcoma[accessedResource: SNOMEDCT:21708004][accessDate: 04-11-2010]
GeneRIF:11927012
GeneRIF:15469899
GeneRIF:15814634
GeneRIF:16010425
Osteogenic sarcoma, NOS
Osteoblastic osteosarcoma
Osteoblastic osteosarcoma[accessedResource: SNOMEDCT:21708004][accessDate: 04-11-2010]
GeneRIF:13678785
[M]Osteosarcoma NOS[accessedResource: SNOMEDCT:21708004][accessDate: 04-11-2010]
James Malone
GeneRIF:15662138
GeneRIF:12792742
GeneRIF:15609301
Sarcoma of the Bone
NCIt:C9312
A malignant mesenchymal tumor arising from the bone.[accessedResource: NCIt:C9312][accessDate: 04-11-2010]
Sarcoma of the Bone[accessedResource: NCIt:C9312][accessDate: 04-11-2010]
DOID:3347
GeneRIF:15310147
Osteosarcoma of bone (disorder)
GeneRIF:15221963
Osteogenic Sarcoma
GeneRIF:16035619
Osseous Sarcoma[accessedResource: NCIt:C9312][accessDate: 04-11-2010]
Osteosarcomas[accessedResource: MSH:D012516][accessDate: 04-11-2010]
GeneRIF:16087680
GeneRIF:14679136
GeneRIF:12237108
GeneRIF:14719070
Bone Sarcoma
GeneRIF:11746983
GeneRIF:15210853
GeneRIF:16328004
dasatinib
302962-49-8
40979
C22H26ClN7O2S
N-(2-chloro-6-methylphenyl)-2-({6-[4-(2-hydroxyethyl)piperazin-1-yl]-2-methylpyrimidin-4-yl}amino)-1,3-thiazole-5-carboxamide
James Malone
The life of an organism, a surgical operation as processual context for a nosocomical infection, the spatiotemporal context occupied by a process of cellular meiosis, the spatiotemporal region occupied by the development of a cancer tumor.
A temporal entity is an entity that has temporal parts and that happens, unfolds or develops through time. An occurrent is something which exists over time, rather than existing completely at many times
temporal measurement
Derived from BFO: Occurrent
thyroid primordium[accessedResource: MAT:0000081][accessDate: 04-11-2010]
thyroid follicles[accessedResource: ZFA:0001072][accessDate: 04-11-2010]
EHDAA:2975
FMAID:9603
XAO:0000162
thyroid follicle[accessedResource: ZFA:0001072][accessDate: 04-11-2010]
SAEL:108
A two-lobed endocrine gland found in all vertebrates, located in front of and on either side of the trachea in humans, and producing various hormones, such as triiodothyronine and calcitonin.
MAT:0000081
BTO:0001379
ZFA:0001072
TAO:0001081
James Malone
thyroid follicles
thyroid primordium
thyroid
EV:0100133
thyroid follicle
thyroid gland
Lobular organ the parenchyma of which consists of ductless, glandular follicles filled with colloid. Examples: thyroid gland proper, accessory thyroid gland, lingual thyroid gland.
A two-lobed endocrine gland found in all vertebrates, located in front of and on either side of the trachea in humans, and producing various hormones, such as triiodothyronine and calcitonin.[accessedResource: BTO:0001379][accessDate: 04-11-2010]
MA:0000129
EMAPA:18827
thyroid gland[accessedResource: BTO:0001379][accessDate: 04-11-2010]
Ele Holloway
James Malone
NCI-H661
A malignant tumor arising from the embryonic remains of the notochord. It is also called chordocarcinoma, chordoepithelioma, and notochordoma. (Dorland, 27th ed)
GeneRIF:16288985
James Malone
A malignant bone tumor arising from the remnants of the fetal notochord. Although it can occur at all ages, it is more frequently seen in middle-aged adults. Most frequent sites of involvement are: sacrococcygeal area, spheno-occipital area, and the cervico-thoraco-lumbar spine. Microscopically, chordomas are composed of cells that form cords and lobules, separated by mucoid intercellular tissue. Some of the cells are large (physaliphorous) and have vacuolated cytoplasm and prominent vesicular nuclei. Other tumor cells are small with small nuclei without visible nucleoli. Chordomas tend to recur and may metastasize. The most common sites of metastasis are skin and bone.
Chordomas
NCIt:C2947
notochordoma
A malignant tumor arising from the embryonic remains of the notochord. It is also called chordocarcinoma, chordoepithelioma, and notochordoma. (Dorland, 27th ed)[accessedResource: MSH:D002817][accessDate: 04-11-2010]
Chordoma (morphologic abnormality)[accessedResource: SNOMEDCT:50007008][accessDate: 04-11-2010]
DOID:3302
Chordoma (morphologic abnormality)
A notochordal cancer that derives_from cellular remnants of the notochord.[accessedResource: DOID:3302][accessDate: 04-11-2010]
Chordomas[accessedResource: MSH:D002817][accessDate: 04-11-2010]
notochordoma[accessedResource: DOID:3302][accessDate: 04-11-2010]
chordoma
MSH:D002817
A malignant bone tumor arising from the remnants of the fetal notochord. Although it can occur at all ages, it is more frequently seen in middle-aged adults. Most frequent sites of involvement are: sacrococcygeal area, spheno-occipital area, and the cervico-thoraco-lumbar spine. Microscopically, chordomas are composed of cells that form cords and lobules, separated by mucoid intercellular tissue. Some of the cells are large (physaliphorous) and have vacuolated cytoplasm and prominent vesicular nuclei. Other tumor cells are small with small nuclei without visible nucleoli. Chordomas tend to recur and may metastasize. The most common sites of metastasis are skin and bone.[accessedResource: NCIt:C2947][accessDate: 04-11-2010]
A notochordal cancer that derives_from cellular remnants of the notochord.
SNOMEDCT:50007008
James Malone
blastula 128-cell
ZFS:0000008
Synovium
Synovium[accessedResource: NCIt:C12473][accessDate: 04-11-2010]
The inner layer of the connective tissue that seals the joint.
NCIt:C12473
synovial membrane
James Malone
The inner layer of the connective tissue that seals the joint.[accessedResource: NCIt:C12473][accessDate: 04-11-2010]
The inner membrane of a joint capsule surrounding a freely movable joint. It is loosely attached to the external fibrous capsule and secretes synovial fluid. (MeSH)
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#array_platform_variation_design[accessedResource: MO_899][accessDate: 04-11-2010]
Tomasz Adamusiak
array platform variation design
MO_899
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#array_platform_variation_design
anterior pituitary gland[accessedResource: BTO:0000040][accessDate: 04-11-2010]
anterior pituitary gland
NIFSTD:birnlex_1581
The anterior glandular lobe of the pituitary gland.
The anterior lobe of the hypophysis (pituitary gland). This lobe contains cells that produce prolactin, growth hormone, thyroid-stimulating hormone, follicle-stimulating hormone and proopiomelanocortin. In contrast to mammalian vertebrates, the adenohypophysis remains in a subepithelial position and there exists no equivalent of Rathke's pouch in zebrafish.
adenohypophysis
anterior hypophysis[accessedResource: ZFA:0001282][accessDate: 04-11-2010]
anterior pituitary
anterior lobe of pituitary[accessedResource: NIFSTD:birnlex_1581][accessDate: 04-11-2010]
anterior lobe of pituitary
James Malone
ZFA:0001282
The anterior lobe of the hypophysis (pituitary gland). This lobe contains cells that produce prolactin, growth hormone, thyroid-stimulating hormone, follicle-stimulating hormone and proopiomelanocortin. In contrast to mammalian vertebrates, the adenohypophysis remains in a subepithelial position and there exists no equivalent of Rathke's pouch in zebrafish.[accessedResource: ZFA:0001282][accessDate: 04-11-2010]
anterior pituitary[accessedResource: ZFA:0001282][accessDate: 04-11-2010]
BTO:0000040
anterior hypophysis
The anterior glandular lobe of the pituitary gland.[accessedResource: BTO:0000040][accessDate: 04-11-2010]
Tomasz Adamusiak
PNS - sympathetic[accessedResource: MAT:0000100][accessDate: 04-11-2010]
PNS - sympathetic
Nervous structures including ganglia outside of the central nervous system.[accessedResource: ZFA:0000142][accessDate: 04-11-2010]
EHDAA:3769
MAT:0000100
sympathetic chain
MA:0000225
pns[accessedResource: ZFA:0000142][accessDate: 04-11-2010]
sympathetic chain[accessedResource: MAT:0000100][accessDate: 04-11-2010]
sympathetic nervous system
One of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord, and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera, and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter.
EV:0100374
EMAPA:16985
Sympathetic part of autonomic division of nervous system
Nervous structures including ganglia outside of the central nervous system.
TAO:0001576
XAO:0000211
FMAID:9906
peripheral nervous system[accessedResource: ZFA:0000142][accessDate: 04-11-2010]
peripheral nervous system
One of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord, and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera, and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter.[accessedResource: BTO:0001832][accessDate: 04-11-2010]
ZFA:0000142
James Malone
pns
BTO:0001832
Sympathetic part of autonomic division of nervous system[accessedResource: FMAID:9906][accessDate: 04-11-2010]
Tomasz Adamusiak
ventral mesenchyme
ZFA:0000164
methyl glyoxal
1628
2-oxopropanal
21628
78-98-8
C3H4O2
James Malone
seedhead
MAT:0000237
MKN28 cell[accessedResource: BTO:0002381][accessDate: 04-11-2010]
MKN-28 cell[accessedResource: BTO:0002381][accessDate: 04-11-2010]
BTO:0002381
James Malone
JCRB0253
Well differentiated human gastric adenocarcinoma cell line.[accessedResource: BTO:0002381][accessDate: 04-11-2010]
MKN28
MKN-28 cell
Ele Holloway
MKN28 cell
MKN-28
Well differentiated human gastric adenocarcinoma cell line.
James Malone
HepaRG
Tomasz Adamusiak
posterior lateral line primordium
ZFA:0001157
Tween 20
A polymer composed of PEG-ylated sorbitan, where the total number of poly(ethylene glycol) units is 20 and a single terminal is capped by a dodecanoyl group.
Polyoxyethylene (20) sorbitan monolaurate
InChI=1/C26H50O10/c1-2-3-4-5-6-7-8-9-10-11-24(30)34-19-18-31-20-22(32-15-12-27)26-25(35-17-14-29)23(21-36-26)33-16-13-28/h22-23,25-29H,2-21H2,1H3
polysorbate 20
Polysorbate
Polyoxyethylene sorbitan monolaurate
InChIKey=HMFKFHLTUCJZJO-UHFFFAOYAO
The time period after birth.[accessedResource: NCIt:C81317][accessDate: 04-11-2010]
The stage of the mother from immediately after the birth of offspring and extending for about six weeks
The time period after birth.
postnatal
NCIt:C81317
Jie Zheng
Tomasz Adamusiak
descending thoracic aorta
FMAID:87217
Ele Holloway
James Malone
NCI-H1838
vancomycin
(1S,2R,18R,19R,22S,25R,28R,40R)-48-{[(2S,3R,4S,5S,6R)-3-{[(2S,4S,6S)-4-amino-5-hydroxy-4,6-dimethyltetrahydro-2H-pyran-2-yl]oxy}-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}-22-(2-amino-2-oxoethyl)-5,15-dichloro-2,18,32,35,37-pentahydroxy-19-{[(2R)-4-methyl-2-(methylamino)pentanoyl]amino}-20,23,26,42,44-pentaoxo-7,13-dioxa-21,24,27,41,43-pentaazaoctacyclo[26.14.2.23,6.214,17.18,12.129,33.010,25.034,39]pentaconta-3,5,8(48),9,11,14,16,29(45),30,32,34,36,38,46,49-pentadecaene-40-carboxylic acid
1404-90-6
22664
42664
C66H75Cl2N9O24
SNOMEDCT:93163002
Lipoma, unspecified site
[M]Lipoma NOS
SNOMEDCT:189013001
Lipoma, no ICD-O subtype[accessedResource: SNOMEDCT:46720004][accessDate: 04-11-2010]
Lipoma NOS (disorder)[accessedResource: SNOMEDCT:189018005][accessDate: 04-11-2010]
LIPOMA NOS
Lipoma, no ICD-O subtype (morphologic abnormality)
Lipoma, no ICD-O subtype
Lipoma of other skin and subcutaneous tissue[accessedResource: ICD9:214.1][accessDate: 04-11-2010]
LIPOMA NEC
SNOMEDCT:46720004
DOID:9291
GeneRIF:12970064
Lipoma of unspecified body site
Lipoma (clinical)
NCIt:C3192
A benign, usually painless, well-circumscribed lipomatous tumor composed of adipose tissue.
Lipoma of other skin and subcutaneous tissue
lipoma
Lipoma of other specified sites (disorder)
Lipoma of unspecified body site[accessedResource: SNOMEDCT:93163002][accessDate: 04-11-2010]
Lipoma (disorder)
ICD9:214.8
LIPOMA SKIN NEC
Lipoma NOS (disorder)
LIPOMA NEC[accessedResource: ICD9:214.8][accessDate: 04-11-2010]
[M]Lipoma NOS (morphologic abnormality)
[M]Lipoma NOS[accessedResource: SNOMEDCT:189776008][accessDate: 04-11-2010]
ICD9:214
Lipoma (disorder)[accessedResource: SNOMEDCT:93163002][accessDate: 04-11-2010]
Lipoma, NOS[accessedResource: SNOMEDCT:46720004][accessDate: 04-11-2010]
ICD9:214.1
LIPOMA SKIN NEC[accessedResource: ICD9:214.1][accessDate: 04-11-2010]
Lipoma of other specified sites
Lipoma of other specified sites[accessedResource: ICD9:214.8][accessDate: 04-11-2010]
Lipoma of other specified sites (disorder)[accessedResource: SNOMEDCT:189013001][accessDate: 04-11-2010]
SNOMEDCT:189776008
Lipoma, unspecified site[accessedResource: ICD9:214.9][accessDate: 04-11-2010]
SNOMEDCT:189018005
ICD9:214.9
[M]Lipoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189776008][accessDate: 04-11-2010]
Lipoma (clinical)[accessedResource: SNOMEDCT:93163002][accessDate: 04-11-2010]
James Malone
A benign, usually painless, well-circumscribed lipomatous tumor composed of adipose tissue.[accessedResource: NCIt:C3192][accessDate: 04-11-2010]
Lipoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:46720004][accessDate: 04-11-2010]
GM12878
Ele Holloway
James Malone
NCI-H716
James Malone
GM12043
James Malone
http://www.ebi.ac.uk/efo/EFO_0001452
Analyte role is a role borne by a material entity and realized by implementation of an analyte measuring assay with objective to detect the magnitude/concentration/ amount of the analyte in the entity bearing evaluant role.
Analyte role is a role borne by a molecular entity and realized in an analyte assay which achieves the objective to measure the magnitude/concentration/amount of the analyte in the entity bearing evaluant role
analyte
analyte role
Ele Holloway
Tomasz Adamusiak
septic peritonitis
http://en.wikipedia.org/wiki/Peritonitis#Septic_peritonitis
James Malone
Tomasz Adamusiak
basal ganglia
Basal is a geometric modifier describing areas associated with the base of an organism or organism part. For example, basal ganglia.
basal
MAT:0000485
NIFSTD:sao-282380853
James Malone
GM11881
polyoxyethylen-9-lauryl ether
James Malone
POELE
DSSTox_CID:39721
CASRN:3055-99-0
Ele Holloway
Tomasz Adamusiak
DSSTox_Generic_SID:C30H62O10
STRUCTURE_Formula:3,6,9,12,15,18,21,24,27-nonaoxanonatriacontan-1-ol
leaf of a moss or liverwort[accessedResource: MAT:0000276][accessDate: 04-11-2010]
James Malone
leaf of a moss or liverwort
phyllid
MAT:0000276
pronormoblast
An immature, nucleated erythrocyte occupying the stage of erythropoeisis that follows formation of erythroid progenitor cells.
rubriblast[accessedResource: CL:0000547][accessDate: 04-11-2010]
proerythroblast
Tomasz Adamusiak
CL:0000547
An immature, nucleated erythrocyte occupying the stage of erythropoeisis that follows formation of erythroid progenitor cells. This cell is CD71-positive, has both a nucleus and a nucleolus, and lacks hematopoeitic lineage markers.
Jie Zheng
rubriblast
An immature, nucleated erythrocyte occupying the stage of erythropoeisis that follows formation of erythroid progenitor cells. This cell is CD71-positive, has both a nucleus and a nucleolus, and lacks hematopoeitic lineage markers.[accessedResource: CL:0000547][accessDate: 04-11-2010]
pronormoblast[accessedResource: CL:0000547][accessDate: 04-11-2010]
James Malone
RNAi profiling is an assay in which double stranded RNA is synthesized with a sequence complementary to a gene(s) of interest and introduced into a cell or organism, where it is recognized as exogenous genetic material and activates the RNAi pathway resulting in knockdown of the transcripts and providing a means to study downstream changes in gene expression.
RNAi profiling by array
ArrayExpress production team
Ele Holloway
James Malone
NCI-H1623
James Malone
http://www.ebi.ac.uk/efo/EFO_0001678
true
A base unit which is a standard measure of the distance between two points.
A length unit is a base unit which is a standard measure of the distance between two points.
length unit
UO:0000001
James Malone
cranial ganglion
BTO:0000106
cranial ganglia
head ganglion
anastrozole
120511-73-1
Pheochromocytoma
Adrenal Pheochromocytoma
Chromaffin Paraganglioma of the Adrenal Gland
A benign or malignant neuroendocrine neoplasm of the sympathetic nervous system that secretes catecholamines. It arises from the chromaffin cells of the adrenal medulla. Clinical presentation includes headaches, palpitations, chest and abdominal pain, hypertension, fever, and tremor. Microscopically, a characteristic nesting (zellballen) growth pattern is usually seen. Other growth patterns including trabecular pattern may also be present.[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
NCIt:C3326
Adrenal Gland Chromaffin Paraganglioma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
PCC
Adrenal Gland Paraganglioma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
A benign or malignant neuroendocrine neoplasm of the sympathetic nervous system that secretes catecholamines. It arises from the chromaffin cells of the adrenal medulla. Clinical presentation includes headaches, palpitations, chest and abdominal pain, hypertension, fever, and tremor. Microscopically, a characteristic nesting (zellballen) growth pattern is usually seen. Other growth patterns including trabecular pattern may also be present.
Pheochromocytoma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
PCC[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
Adrenal Pheochromocytoma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
Chromaffin Paraganglioma of the Adrenal Gland[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
Adrenal Medullary Paraganglioma
Phaeochromocytoma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
adrenal gland pheochromocytoma
Intraadrenal Paraganglioma
Adrenal Medullary Paraganglioma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
Adrenal Gland Chromaffinoma
Phaeochromocytoma
Adrenal Gland Chromaffin Paraganglioma
Adrenal Gland Chromaffinoma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
Adrenal Medullary Pheochromocytoma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
Intraadrenal Paraganglioma[accessedResource: NCIt:C3326][accessDate: 04-11-2010]
Adrenal Gland Paraganglioma
Adrenal Medullary Pheochromocytoma
James Malone
GeneRIF:15556610
chronic myeloid leukemia without mention of remission
Chronic Myelogenous Leukemias
GeneRIF:14586403
CML - chronic Myelogenous Leukemia[accessedResource: DOID:8552][accessDate: 04-11-2010]
GeneRIF:12130516
Myeloid Leukemia, Philadelphia Positive[accessedResource: MSH:D015464][accessDate: 04-11-2010]
GeneRIF:15621754
CML - chronic Myelogenous Leukemia
MSH:D015464
GeneRIF:12734675
GeneRIF:12576428
LEUKEMIA PHILA POS[accessedResource: MSH:D015464][accessDate: 04-11-2010]
Leukemias, Chronic Myeloid
Leukemias, Ph1-Positive Myelogenous[accessedResource: MSH:D015464][accessDate: 04-11-2010]
GeneRIF:12408765
chronic myeloid leukemia
Leukemia, Chronic Granulocytic[accessedResource: MSH:D015464][accessDate: 04-11-2010]
GeneRIF:15790787
1.4
Leukemias, Chronic Myelocytic
chronic myelogenous leukemia
GeneRIF:14656881
DOID:8552
chronic myeloid leukemia in remission (disorder)[accessedResource: DOID:8552][accessDate: 04-11-2010]
chronic myeloid leukemia, disease (disorder)
chronic myeloid leukemia in remission
Leukemia, Myelogenous, Chronic, BCR-ABL Positive
Ph1-Positive Myeloid Leukemias
Leukemias, Chronic Myelogenous[accessedResource: MSH:D015464][accessDate: 04-11-2010]
LEUKEMIA PHILA POS
CML in Remission[accessedResource: DOID:8552][accessDate: 04-11-2010]
ICD9:205.1
Clonal hematopoetic disorder caused by an acquired genetic defect in PLURIPOTENT STEM CELLS. It starts in MYELOID CELLS of the bone marrow, invades the blood and then other organs. The condition progresses from a stable, more indolent, chronic phase (LEUKEMIA, MYELOID, CHRONIC PHASE) lasting up to 7 years, to an advanced phase composed of an accelerated phase (LEUKEMIA, MYELOID, ACCELERATED PHASE) and BLAST CRISIS.
Ph1-Positive Myelogenous Leukemia[accessedResource: MSH:D015464][accessDate: 04-11-2010]
chronic myeloid leukaemia[accessedResource: DOID:8552][accessDate: 04-11-2010]
Leukemia, Myelogenous, Chronic, BCR-ABL Positive[accessedResource: MSH:D015464][accessDate: 04-11-2010]
GeneRIF:12144533
GeneRIF:12821944
GeneRIF:15626746
GeneRIF:15569990
GeneRIF:11937267
GeneRIF:15388581
GeneRIF:12505259
chronic myelogenous leukemia, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:8552][accessDate: 04-11-2010]
Leukemia, Myeloid, Philadelphia-Positive
Leukemias, Chronic Granulocytic
chronic myeloid leukaemia
CML[accessedResource: DOID:8552][accessDate: 04-11-2010]
GeneRIF:15716990
GeneRIF:15735728
GeneRIF:15167915
GeneRIF:15213099
GeneRIF:15481444
GeneRIF:12964051
GeneRIF:12576338
Leukemia, Myelogenous, Ph1-Positive
GeneRIF:14523459
chronic myeloid leukemia NOS (disorder)[accessedResource: DOID:8552][accessDate: 04-11-2010]
GeneRIF:11830496
Leukemia, Ph1-Positive Myeloid[accessedResource: MSH:D015464][accessDate: 04-11-2010]
James Malone
GeneRIF:16361542
GeneRIF:15676212
Leukemias, Ph1-Positive Myeloid[accessedResource: MSH:D015464][accessDate: 04-11-2010]
Leukemia, Ph1-Positive Myeloid
chronic myeloid leukemia without mention of remission[accessedResource: DOID:8552][accessDate: 04-11-2010]
GeneRIF:12351404
Myelocytic Leukemia, Chronic
chronic myeloid leukemia NOS (disorder)
Leukemias, Philadelphia-Positive Myeloid[accessedResource: MSH:D015464][accessDate: 04-11-2010]
GeneRIF:12393722
Chronic Myelocytic Leukemias[accessedResource: MSH:D015464][accessDate: 04-11-2010]
Clonal hematopoetic disorder caused by an acquired genetic defect in PLURIPOTENT STEM CELLS. It starts in MYELOID CELLS of the bone marrow, invades the blood and then other organs. The condition progresses from a stable, more indolent, chronic phase (LEUKEMIA, MYELOID, CHRONIC PHASE) lasting up to 7 years, to an advanced phase composed of an accelerated phase (LEUKEMIA, MYELOID, ACCELERATED PHASE) and BLAST CRISIS.[accessedResource: MSH:D015464][accessDate: 04-11-2010]
Myeloid Leukemias, Chronic[accessedResource: MSH:D015464][accessDate: 04-11-2010]
chronic myeloid leukemia in remission[accessedResource: DOID:8552][accessDate: 04-11-2010]
Myeloid leukemia, chronic[accessedResource: ICD9:205.1][accessDate: 04-11-2010]
GeneRIF:15583852
CML
Myeloid Leukemias, Philadelphia-Positive
Chronic Myelocytic Leukemia[accessedResource: MSH:D015464][accessDate: 04-11-2010]
CML in Remission
GeneRIF:11861294
Granulocytic Leukemia, Chronic
Chronic Granulocytic Leukemias[accessedResource: MSH:D015464][accessDate: 04-11-2010]
chronic myelogenous leukemia, no ICD-O subtype (morphologic abnormality)
chronic myeloid leukemia, disease (disorder)[accessedResource: DOID:8552][accessDate: 04-11-2010]
GeneRIF:12740446
chronic myeloid leukemia in remission (disorder)
Myelogenous Leukemias, Ph1-Positive
TAO:0000354
external gill[accessedResource: MAT:0000134][accessDate: 04-11-2010]
MAT:0000134
external gill
gills[accessedResource: ZFA:0000354][accessDate: 04-11-2010]
A paired respiratory organ in fishes consisting of gill filaments on the gill arch in the posterior portion of the head and usually providing the primary exchange of gases between the blood and the surrounding water.[accessedResource: BTO:0000518][accessDate: 04-11-2010]
gill
Compound organ that consists of gill filaments, gill lamellae, gill rakers and pharyngeal arches 3-7. The gills are responsible for primary gas exchange between the blood and the surrounding water.
James Malone
branchia
A paired respiratory organ in fishes consisting of gill filaments on the gill arch in the posterior portion of the head and usually providing the primary exchange of gases between the blood and the surrounding water.
MFO:0003180
gills
ZFA:0000354
Compound organ that consists of gill filaments, gill lamellae, gill rakers and pharyngeal arches 3-7. The gills are responsible for primary gas exchange between the blood and the surrounding water.[accessedResource: ZFA:0000354][accessDate: 04-11-2010]
BTO:0000518
branchia[accessedResource: BTO:0000518][accessDate: 04-11-2010]
XAO:0000120
Ele Holloway
James Malone
HH
James Malone
WKY
RGD:61103
CHEBI:50122
5-(4-{2-[methyl(pyridin-2-yl)amino]ethoxy}benzyl)-1,3-thiazolidine-2,4-dione
A thiazolidenedione that has formula C18H19N3O3S.
James Malone
InChIKey=YASAKCUCGLMORW-UYBDAZJACF
rosiglitazona
InChI=1/C18H19N3O3S/c1-21(16-4-2-3-9-19-16)10-11-24-14-7-5-13(6-8-14)12-15-17(22)20-18(23)25-15/h2-9,15H,10-12H2,1H3,(H,20,22,23)/f/h20H
rosiglitazonum
rosiglitazone
C18H19N3O3S
CN(CCOc1ccc(CC2SC(=O)NC2=O)cc1)c1ccccn1
http://www.ebi.ac.uk/efo/EFO_0001605
5-((4-(2-(methyl-2-pyridinylamino)ethoxy)phenyl)methyl)-2,4-thiazolidinedione
BRL-49653
James Malone
appendage
MAT:0000023
Tomasz Adamusiak
salivary gland body primordium
FBbt:00005512
Ele Holloway
James Malone
CAL62
CL:0000365
ZFS:0000001
The stage at which a diploid cell is produced by the fusion of sperm cell nucleus and egg cell.
Tomasz Adamusiak
Diploid cell produced by the fusion of sperm cell nucleus and egg cell.
zygote
Zygote:1-cell
Zygote:1-cell[accessedResource: ZFS:0000001][accessDate: 04-11-2010]
Diploid cell produced by the fusion of sperm cell nucleus and egg cell.[accessedResource: CL:0000365][accessDate: 04-11-2010]
lateral ventricle
An internal cavity in each cerebral hemisphere that consists of a central body and three cornua including an anterior one curving forward and outward, a posterior one curving backward, and an inferior one curving downward.[accessedResource: BTO:0000879][accessDate: 04-11-2010]
James Malone
Ventricles, Lateral
Lateral Ventricle of Brain[accessedResource: C12834][accessDate: 04-11-2010]
Part of the ventricular system of the brain in each of the cerebral hemispheres. The lateral ventricle in each hemisphere is separated from the other by the septum and each communicates with the THIRD VENTRICLE by the foramen of Monro, In species, particularly those with well developed cortex, the lateral ventrical may be subdivided into anterior, posterior and temporal horns and a body
BTO:0000879
The rostral extensions of the ventricular system of the brain consisting of two cavities, one on each side of the brain within the central regions of each cerebral hemisphere. Cerebrospinal fluid flows from the lateral ventricles into the centrally third ventricle via the foramen of Monroe.[accessedResource: C12834][accessDate: 04-11-2010]
Ventricles, Lateral[accessedResource: C12834][accessDate: 04-11-2010]
Tomasz Adamusiak
C12834
The rostral extensions of the ventricular system of the brain consisting of two cavities, one on each side of the brain within the central regions of each cerebral hemisphere. Cerebrospinal fluid flows from the lateral ventricles into the centrally third ventricle via the foramen of Monroe.
NIFSTD:birnlex_1263
An internal cavity in each cerebral hemisphere that consists of a central body and three cornua including an anterior one curving forward and outward, a posterior one curving backward, and an inferior one curving downward.
Part of the ventricular system of the brain in each of the cerebral hemispheres. The lateral ventricle in each hemisphere is separated from the other by the septum and each communicates with the THIRD VENTRICLE by the foramen of Monro, In species, particularly those with well developed cortex, the lateral ventrical may be subdivided into anterior, posterior and temporal horns and a body[accessedResource: NIFSTD:birnlex_1263][accessDate: 04-11-2010]
Lateral Ventricle of Brain
The largest and most superficial muscle of the calf of the leg arising by two heads from the condyles of the femur and attaching to a tendon that becomes part of the Achilles tendon.[accessedResource: BTO:0000506][accessDate: 04-11-2010]
James Malone
NCIt:C32666
A large muscle in the back of the lower leg. Its action involves the plantar flexion of the foot.[accessedResource: NCIt:C32666][accessDate: 04-11-2010]
gastrocnemius muscle
The largest and most superficial muscle of the calf of the leg arising by two heads from the condyles of the femur and attaching to a tendon that becomes part of the Achilles tendon.
gastrocnemius muscle[accessedResource: BTO:0000506][accessDate: 04-11-2010]
A large muscle in the back of the lower leg. Its action involves the plantar flexion of the foot.
BTO:0000506
gastrocnemius
Tomasz Adamusiak
embryonic proventriculus inner layer
FBbt:00005608
James Malone
posterior cingulate cortex
Tomasz Adamusiak
floor plate neural rod
ZFA:0000887
blood cells[accessedResource: MAT:0000083][accessDate: 04-11-2010]
circulating cells
James Malone
ZFA:0009043
MA:0000059
blood cell
Peripheral Blood
A liquid tissue; its major function is to transport oxygen throughout the body. It also supplies the tissues with nutrients, removes waste products, and contains various components of the immune system defending the body against infection. Several hormones also travel in the blood.
CL:0000080
TAO:0009044
MO_409
1: The fluid that circulates in the heart, arteries, capillaries, and veins of a vertebrate animal carrying nourishment and oxygen to and bringing away waste products from all parts of the body.n2: A comparable fluid of an invertebrate.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#blood[accessedResource: MO_409][accessDate: 04-11-2010]
1: The fluid that circulates in the heart, arteries, capillaries, and veins of a vertebrate animal carrying nourishment and oxygen to and bringing away waste products from all parts of the body.n2: A comparable fluid of an invertebrate.[accessedResource: BTO:0000089][accessDate: 04-11-2010]
circulating cell
whole blood
blood cells
blood cell[accessedResource: TAO:0009044][accessDate: 04-11-2010]
A cell found predominately in the blood.[accessedResource: TAO:0009044][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#blood
Reticuloendothelial System, Blood[accessedResource: NCIt:C12434][accessDate: 04-11-2010]
Peripheral Blood[accessedResource: NCIt:C12434][accessDate: 04-11-2010]
Tomasz Adamusiak
blood
Reticuloendothelial System, Blood
SAEL:8
circulating cells[accessedResource: ZFA:0009043][accessDate: 04-11-2010]
A cell which moves among different tissues of the body, via blood, lymph, or other medium.[accessedResource: ZFA:0009043][accessDate: 04-11-2010]
A liquid tissue; its major function is to transport oxygen throughout the body. It also supplies the tissues with nutrients, removes waste products, and contains various components of the immune system defending the body against infection. Several hormones also travel in the blood.[accessedResource: NCIt:C12434][accessDate: 04-11-2010]
MAT:0000083
A cell which moves among different tissues of the body, via blood, lymph, or other medium.
Jie Zheng
NCIt:C12434
BTO:0000089
circulating cell[accessedResource: MAT:0000083][accessDate: 04-11-2010]
A cell found predominately in the blood.
James Malone
A mass unit density which is equal to mass of an object in milligrams divided by the volume in milliliters.
UO:0000176
mg/ml
milligram per milliliter
true
A milligram per milliliter is a density unit which is equal to mass of an object in milligrams divided by the volume in milliliters.
http://www.ebi.ac.uk/efo/EFO_0001809
A precursor cell destined to differentiate into smooth muscle myocytes.[accessedResource: CL:0000514][accessDate: 04-11-2010]
satellite cell[accessedResource: CL:0000514][accessDate: 04-11-2010]
Tomasz Adamusiak
A precursor cell destined to differentiate into smooth muscle myocytes.
smooth muscle myoblast
CL:0000514
satellite cell
C12H18O3
CC\\C=C/C[C@@H]1[C@H](CCC1=O)CC(O)=O
InChIKey=ZNJFBWYDHIGLCU-JXYCJCKWDR
Jasmonate
(1R,2R)-3-oxo-2-(pent-2Z-enyl)-cyclopentaneacetic acid
{(1R,2R)-3-oxo-2-[(2Z)-pent-2-en-1-yl]cyclopentyl}acetic acid
jasmonic acid
(1R,2R)-3-oxo-2-(2Z)-2-penten-ylcyclopentanacetic acid
An oxo monocarboxylic acid that has formula C12H18O3.
http://www.ebi.ac.uk/efo/EFO_0001560
2-{(1R,2R)-3-oxo-2-[(Z)-pent-2-enyl]cyclopentyl}acetate
InChI=1/C12H18O3/c1-2-3-4-5-10-9(8-12(14)15)6-7-11(10)13/h3-4,9-10H,2,5-8H2,1H3,(H,14,15)/b4-3-/t9-,10-/m1/s1/f/h14H
CHEBI:18292
Ele Holloway
James Malone
Tomasz Adamusiak
vascular endothelial growth factor
CASRN:127464-60-2
DSSTox_Generic_SID:40639
VEGF
AF - Atrial fibrillation[accessedResource: SNOMEDCT:49436004][accessDate: 04-11-2010]
GeneRIF:15467744
Auricular Fibrillations
MSH:D001281
GeneRIF:12205093
GeneRIF:15289369
GeneRIF:15028053
GeneRIF:12089346
GeneRIF:15459252
GeneRIF:9722616
GeneRIF:12522251
AF - Atrial fibrillation
Fibrillations, Auricular[accessedResource: MSH:D001281][accessDate: 04-11-2010]
GeneRIF:12093745
GeneRIF:14574075
Atrial Fibrillations
GeneRIF:15922306
GeneRIF:12808105
James Malone
GeneRIF:12154005
Abnormal cardiac rhythm that is characterized by rapid, uncoordinated firing of electrical impulses in the upper chambers of the heart (HEART ATRIA). In such case, blood cannot be effectively pumped into the lower chambers of the heart (HEART VENTRICLES). It is caused by abnormal impulse generation.[accessedResource: MSH:D001281][accessDate: 04-11-2010]
atrial fibrillation
GeneRIF:11956217
GeneRIF:14652651
GeneRIF:11748095
GeneRIF:12228786
GeneRIF:12824162
DOID:11276
Atrial fibrillation (disorder)[accessedResource: DOID:11276][accessDate: 04-11-2010]
GeneRIF:11839628
GeneRIF:14651967
SNOMEDCT:49436004
Atrial fibrillation (disorder)
GeneRIF:15023884
GeneRIF:15705965
GeneRIF:14678810
GeneRIF:15368194
GeneRIF:16377932
ICD9:427.31
Auricular Fibrillation
GeneRIF:15297374
GeneRIF:12920062
GeneRIF:12554751
Abnormal cardiac rhythm that is characterized by rapid, uncoordinated firing of electrical impulses in the upper chambers of the heart (HEART ATRIA). In such case, blood cannot be effectively pumped into the lower chambers of the heart (HEART VENTRICLES). It is caused by abnormal impulse generation.
GeneRIF:15249499
GeneRIF:16301177
GeneRIF:15671429
GeneRIF:12607777
Fibrillations, Atrial[accessedResource: MSH:D001281][accessDate: 04-11-2010]
GeneRIF:15610520
Auricular Fibrillation[accessedResource: MSH:D001281][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#fM[accessedResource: MO_898][accessDate: 04-11-2010]
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001814
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#fM
MO_898
femtomolar
A unit of molarity which is equal to 10^[-15] M.
Jie Zheng
James Malone
fM
true
James Malone
true
micromole per liter
micromole per litre
umol/L
Ele Holloway
James Malone
Tomasz Adamusiak
exendin-4
CASRN:141758-74-9
DSSTox_Generic_SID:40475
EX-4
Multi-tissue structure that contains the retinal neural layer and the retinal pigmented epithelium, and develops from the optic cup.[accessedResource: ZFA:0000152][accessDate: 04-11-2010]
retinas[accessedResource: ZFA:0000152][accessDate: 04-11-2010]
The sensory membrane that lines the eye, is composed of several layers including one containing the rods and cones, and functions as the immediate instrument of vision by receiving the image formed by the lens and converting it into chemical and nervous signals which reach the brain by way of the optic nerve.
EV:0100348
Inner layer of eyeball
Tunica interna of eyeball
The sensory membrane that lines the eye, is composed of several layers including one containing the rods and cones, and functions as the immediate instrument of vision by receiving the image formed by the lens and converting it into chemical and nervous signals which reach the brain by way of the optic nerve.[accessedResource: BTO:0001175][accessDate: 04-11-2010]
The array of photoreceptors & the cells that support them in a compound eye.
Tomasz Adamusiak
BTO:0001175
SAEL:91
EHDAA:4757
James Malone
The portion of the eye developing from the optic primordium and including the neural retina and the retinal pigment layer. Kimmel et al, 1995.
retinas
XAO:0000009
Layer of wall of eyeball which is continuous with optic nerve.
retina[accessedResource: TAO:0000152][accessDate: 04-11-2010]
MAT:0000142
retina structure
EMAPA:17168
The portion of the eye developing from the optic primordium and including the neural retina and the retinal pigment layer. Kimmel et al, 1995.[accessedResource: TAO:0000152][accessDate: 04-11-2010]
Multi-tissue structure that contains the retinal neural layer and the retinal pigmented epithelium, and develops from the optic cup.
The array of photoreceptors and the cells that support them in a compound eye.
The array of photoreceptors and the cells that support them in a compound eye.[accessedResource: FBbt:00004200][accessDate: 04-11-2010]
MA:0000276
TADS:0000551
MFO:0003600
FMAID:58301
ZFA:0000152
retina
FBbt:00004200
NIFSTD:birnlex_1153
TAO:0000152
Tomasz Adamusiak
ventral mesoderm
ZFA:0000083
digit
James Malone
forelimb digit[accessedResource: MAT:0000285][accessDate: 04-11-2010]
XAO:0003036
forelimb digit
MAT:0000285
SAEL:29
XAO:0003035
hindlimb digit
hindlimb digit[accessedResource: MAT:0000285][accessDate: 04-11-2010]
NEOPLASMS BENIGN, MALIGNANT AND UNSPECIFIED (INCL CYSTS AND POLYPS)
Neoplastic Growth
neoplasm
An abnormal tissue growth resulted from uncontrolled cell proliferation. Benign neoplastic cells resemble normal cells without exhibiting significant cytologic atypia, while malignant ones exhibit overt signs such as dysplastic features, atypical mitotic figures, necrosis, nuclear pleomorphism, and anaplasia. Representative examples of benign neoplasms include papillomas, cystadenomas, and lipomas; malignant neoplasms include carcinomas, sarcomas, lymphomas, and leukemias.
Neoplasms[accessedResource: NCIt:C3262][accessDate: 04-11-2010]
Neoplasia
Neoplastic Growth[accessedResource: NCIt:C3262][accessDate: 04-11-2010]
Neoplasia[accessedResource: NCIt:C3262][accessDate: 04-11-2010]
Tumor[accessedResource: NCIt:C3262][accessDate: 04-11-2010]
Tumor
A benign or malignant tissue growth resulting from uncontrolled cell proliferation. Benign neoplastic cells resemble normal cells without exhibiting significant cytologic atypia, while malignant cells exhibit overt signs such as dysplastic features, atypical mitotic figures, necrosis, nuclear pleomorphism, and anaplasia. Representative examples of benign neoplasms include papillomas, cystadenomas, and lipomas; malignant neoplasms include carcinomas, sarcomas, lymphomas, and leukemias.[accessedResource: NCIt:C3262][accessDate: 04-11-2010]
An abnormal tissue growth resulted from uncontrolled cell proliferation.
James Malone
Neoplasms
NEOPLASMS BENIGN, MALIGNANT AND UNSPECIFIED (INCL CYSTS AND POLYPS)[accessedResource: NCIt:C3262][accessDate: 04-11-2010]
A benign or malignant tissue growth resulting from uncontrolled cell proliferation. Benign neoplastic cells resemble normal cells without exhibiting significant cytologic atypia, while malignant cells exhibit overt signs such as dysplastic features, atypical mitotic figures, necrosis, nuclear pleomorphism, and anaplasia. Representative examples of benign neoplasms include papillomas, cystadenomas, and lipomas; malignant neoplasms include carcinomas, sarcomas, lymphomas, and leukemias.
NCIt:C3262
James Malone
A sensory system disease is a disease which has as location the sensory system.
sensory system disease
The cell protoplasm after removal of the cell wall.[accessedResource: CL:0000371][accessDate: 04-11-2010]
Tomasz Adamusiak
The cell protoplasm after removal of the cell wall.
protoplast
CL:0000371
STRUCTURE_ChemicalName_IUPAC:1-ethyl-6-fluoro-4-oxo-7-piperazin-1-yl-1,4-dihydroquinoline-3-carboxylic acid
norfloxacin
Ele Holloway
CASRN:70458-96-7
DSSTox_Generic_SID:37680
James Malone
DSSTox_CID:17680
Tomasz Adamusiak
STRUCTURE_Formula:C16H18FN3O3
stem cell derived cell line
A porelike structure surrounding the entire circumference of the anterior chamber through which aqueous humor circulates to the canal of Schlemm. (MeSH)[accessedResource: NCIt:C12803][accessDate: 04-11-2010]
Tomasz Adamusiak
A porelike structure surrounding the entire circumference of the anterior chamber through which aqueous humor circulates to the canal of Schlemm. (MeSH)
trabecular meshwork
NCIt:C12803
GeneRIF:15201549
GeneRIF:12536339
GeneRIF:15743788
GeneRIF:15121838
GeneRIF:15059935
GeneRIF:12468106
GeneRIF:11840488
GeneRIF:12391843
GeneRIF:11988231
GeneRIF:12782219
GeneRIF:15316241
GeneRIF:12032592
GeneRIF:12023056
(hypertensive disease) or (hypertension)
GeneRIF:14688210
GeneRIF:12181435
vascular hypertensive disorder[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:12218313
GeneRIF:14871557
GeneRIF:12950120
hypertensive disease NOS[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:11882615
GeneRIF:15935077
GeneRIF:15480097
GeneRIF:15864120
GeneRIF:15492474
GeneRIF:15887114
GeneRIF:12165748
GeneRIF:13679998
GeneRIF:15498972
GeneRIF:12529502
GeneRIF:15746214
GeneRIF:12443993
GeneRIF:14573316
GeneRIF:12452325
GeneRIF:12771048
GeneRIF:15950062
High blood pressure (& [essential hypertension])[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:12172320
GeneRIF:14969735
(hypertensive disease) or (hypertension)[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:15131114
GeneRIF:15480094
Hypertensive disease NOS (disorder)[accessedResource: SNOMEDCT:194794002][accessDate: 04-11-2010]
GeneRIF:15545843
GeneRIF:11984003
GeneRIF:14514639
GeneRIF:14744462
GeneRIF:12867255
GeneRIF:15662218
GeneRIF:15314687
GeneRIF:15055253
GeneRIF:12397037
GeneRIF:15479166
GeneRIF:15994241
GeneRIF:14620922
Hypertensive disease (disorder)
GeneRIF:11882590
Hypertensive disease NOS (disorder)
MSH:D006973
GeneRIF:14621190
GeneRIF:16115223
GeneRIF:15076189
GeneRIF:12372791
GeneRIF:15471983
GeneRIF:15640278
GeneRIF:12388212
GeneRIF:15756929
GeneRIF:15773229
GeneRIF:15611369
GeneRIF:15097232
hyperpiesia[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:16144986
GeneRIF:12670743
GeneRIF:15020309
GeneRIF:15927846
GeneRIF:15054141
GeneRIF:11924719
James Malone
GeneRIF:15253101
GeneRIF:14693679
GeneRIF:11792466
GeneRIF:12865163
GeneRIF:15136501
GeneRIF:15598876
GeneRIF:15489962
GeneRIF:16037544
GeneRIF:12105146
GeneRIF:12388782
GeneRIF:14719182
GeneRIF:12891286
GeneRIF:12122115
GeneRIF:15583131
GeneRIF:12706259
GeneRIF:15638826
GeneRIF:16003175
GeneRIF:12372003
GeneRIF:11798846
SNOMEDCT:194794002
GeneRIF:15643128
GeneRIF:12452334
GeneRIF:12730030
GeneRIF:15737640
GeneRIF:16243970
GeneRIF:15956775
GeneRIF:12566855
HTN - hypertension
GeneRIF:15059929
GeneRIF:12719438
[X]Hypertensive diseases[accessedResource: SNOMEDCT:195537001][accessDate: 04-11-2010]
GeneRIF:11833851
GeneRIF:12217425
GeneRIF:14608379
GeneRIF:15809299
GeneRIF:12429553
GeneRIF:12072411
GeneRIF:12642508
GeneRIF:11803452
GeneRIF:15726642
GeneRIF:15048641
GeneRIF:15890973
GeneRIF:12446729
GeneRIF:12130711
GeneRIF:14515341
GeneRIF:15458945
GeneRIF:14653307
GeneRIF:12460053
GeneRIF:16203874
GeneRIF:11903302
GeneRIF:15554460
Blood Pressures, High[accessedResource: MSH:D006973][accessDate: 04-11-2010]
GeneRIF:14551242
GeneRIF:15671602
GeneRIF:11986365
GeneRIF:12133472
GeneRIF:11872379
GeneRIF:15233982
GeneRIF:14697241
GeneRIF:15106800
GeneRIF:15908963
GeneRIF:15148501
GeneRIF:14970360
GeneRIF:15452033
GeneRIF:15075196
High blood pressure (& [essential hypertension])
GeneRIF:14744925
hypertension NOS
GeneRIF:15928032
GeneRIF:14736842
GeneRIF:12215464
GeneRIF:12511523
GeneRIF:15975728
GeneRIF:12644270
GeneRIF:12742250
GeneRIF:15831362
GeneRIF:15678704
GeneRIF:15123570
GeneRIF:16115038
GeneRIF:15146954
ICD9:997.91
GeneRIF:11864924
GeneRIF:14622117
GeneRIF:15809361
GeneRIF:15097233
GeneRIF:15100095
GeneRIF:15469887
GeneRIF:15942458
GeneRIF:14993194
GeneRIF:15194301
GeneRIF:15797740
hyperpiesia
GeneRIF:15126519
GeneRIF:12213905
GeneRIF:14697676
GeneRIF:15451779
vascular hypertensive disorder
GeneRIF:15613621
GeneRIF:14966368
GeneRIF:15659047
GeneRIF:16172427
GeneRIF:14618677
DOID:10763
GeneRIF:15311109
GeneRIF:14553964
Persistently high systemic arterial BLOOD PRESSURE. Based on multiple readings (BLOOD PRESSURE DETERMINATION), hypertension is currently defined as when SYSTOLIC PRESSURE is consistently greater than 140 mm Hg or when DIASTOLIC PRESSURE is consistently 90 mm Hg or more.[accessedResource: MSH:D006973][accessDate: 04-11-2010]
GeneRIF:15076153
GeneRIF:12364355
GeneRIF:12746411
GeneRIF:14752100
GeneRIF:14633140
GeneRIF:15726836
GeneRIF:12025958
SURG COMP - HYPERTENSION
GeneRIF:15753233
GeneRIF:15554451
GeneRIF:14707164
GeneRIF:12359981
GeneRIF:12482634
GeneRIF:12484509
GeneRIF:15596575
GeneRIF:15302839
GeneRIF:11849458
GeneRIF:12145290
GeneRIF:12511547
GeneRIF:12215473
GeneRIF:12021582
GeneRIF:15146950
HYPERTENSIVE DISEASE
GeneRIF:14654758
GeneRIF:12544440
GeneRIF:11799081
GeneRIF:12390711
GeneRIF:16097364
GeneRIF:15944206
GeneRIF:11877320
GeneRIF:15340103
GeneRIF:12540629
GeneRIF:14967839
GeneRIF:14643573
GeneRIF:14701907
HTN[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:15244100
GeneRIF:12751759
GeneRIF:12480131
GeneRIF:11956157
hypertension NOS[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:15050533
GeneRIF:12975385
GeneRIF:15452029
GeneRIF:15809359
GeneRIF:11882596
GeneRIF:11976386
HTN
GeneRIF:14499437
High Blood Pressure[accessedResource: MSH:D006973][accessDate: 04-11-2010]
GeneRIF:11952164
GeneRIF:14515335
GeneRIF:15363817
GeneRIF:14604995
GeneRIF:11821707
GeneRIF:15055249
GeneRIF:12872043
GeneRIF:11800057
GeneRIF:12844513
GeneRIF:15831363
GeneRIF:15015152
GeneRIF:11692154
GeneRIF:12030900
High Blood Pressures
GeneRIF:15110905
GeneRIF:15480095
Persistently high systemic arterial BLOOD PRESSURE. Based on multiple readings (BLOOD PRESSURE DETERMINATION), hypertension is currently defined as when SYSTOLIC PRESSURE is consistently greater than 140 mm Hg or when DIASTOLIC PRESSURE is consistently 90 mm Hg or more.
GeneRIF:15824199
GeneRIF:15824463
GeneRIF:15662219
GeneRIF:16216916
GeneRIF:15738350
GeneRIF:14568996
GeneRIF:15831367
GeneRIF:12450315
GeneRIF:16091581
GeneRIF:15967869
hypertension
GeneRIF:15076188
GeneRIF:12399948
GeneRIF:15146952
GeneRIF:12484516
GeneRIF:16172428
GeneRIF:15775784
HTN - hypertension[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:15076154
GeneRIF:12023681
GeneRIF:12627873
GeneRIF:12215468
GeneRIF:16286571
GeneRIF:12729892
GeneRIF:15579504
GeneRIF:12050272
GeneRIF:12569260
SNOMEDCT:195537001
GeneRIF:12574109
GeneRIF:15850776
hypertensive disease[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:15993631
GeneRIF:14699441
GeneRIF:14988405
GeneRIF:16130282
GeneRIF:12506509
GeneRIF:15198480
GeneRIF:15117826
GeneRIF:12297007
GeneRIF:16051894
GeneRIF:15190056
GeneRIF:15728438
GeneRIF:12732339
GeneRIF:12911547
GeneRIF:12924622
GeneRIF:12518270
GeneRIF:12429873
GeneRIF:16166162
hypertensive disease NOS
GeneRIF:11880335
GeneRIF:12775885
GeneRIF:15766329
GeneRIF:12566941
GeneRIF:12484512
GeneRIF:14597849
[X]Hypertensive diseases (disorder)
GeneRIF:15201550
GeneRIF:12878376
GeneRIF:16012192
GeneRIF:15797659
GeneRIF:15195688
GeneRIF:15966738
GeneRIF:15758045
GeneRIF:16103269
GeneRIF:12925562
GeneRIF:15896881
GeneRIF:12754175
GeneRIF:12013496
GeneRIF:12669427
GeneRIF:14616762
GeneRIF:16280269
GeneRIF:16230521
GeneRIF:15784171
GeneRIF:15914769
[X]Hypertensive diseases
GeneRIF:14742306
GeneRIF:15837834
GeneRIF:12515852
GeneRIF:15738346
GeneRIF:12011775
GeneRIF:12457738
GeneRIF:16221215
GeneRIF:14718360
GeneRIF:16103266
GeneRIF:16144989
GeneRIF:16209130
GeneRIF:12244304
GeneRIF:14506074
GeneRIF:15621007
GeneRIF:12968128
GeneRIF:15498966
Blood Pressure, High
GeneRIF:15292344
GeneRIF:12117726
GeneRIF:15078565
GeneRIF:14621188
GeneRIF:15699473
GeneRIF:15042429
GeneRIF:12884521
GeneRIF:14506400
GeneRIF:14744461
GeneRIF:16132104
ICD9:401-405.99
GeneRIF:15716853
GeneRIF:12677022
GeneRIF:12192616
GeneRIF:15304560
GeneRIF:16115032
GeneRIF:15475025
GeneRIF:15996002
GeneRIF:14698468
GeneRIF:15886479
GeneRIF:12476421
GeneRIF:15905889
GeneRIF:12670745
GeneRIF:15141213
[X]Hypertensive diseases (disorder)[accessedResource: SNOMEDCT:195537001][accessDate: 04-11-2010]
GeneRIF:11910303
GeneRIF:15193619
GeneRIF:12639805
GeneRIF:12860835
hypertensive disease (disorder)[accessedResource: DOID:10763][accessDate: 04-11-2010]
GeneRIF:12419325
GeneRIF:12648304
GeneRIF:14499940
GeneRIF:15340111
GeneRIF:16027245
SURG COMP - HYPERTENSION[accessedResource: ICD9:997.91][accessDate: 04-11-2010]
GeneRIF:15866055
GeneRIF:12695524
GeneRIF:15563533
GeneRIF:11926353
GeneRIF:15894833
GeneRIF:15162499
GeneRIF:12817181
GeneRIF:16377929
GeneRIF:15037565
GeneRIF:15952872
GeneRIF:15699451
GeneRIF:12646192
GeneRIF:15920074
GeneRIF:12566942
GeneRIF:16280279
http://www.ebi.ac.uk/efo/EFO_0001831
vitamin
vitamins
vitaminum
vitamina
vitamines
vitamine
An organic substance that is distributed in foodstuffs, is distinct from the main organic components of food (protein, carbohydrate and fat) and is needed for the normal nutrition of the organism in question. The term "vitamines" (from vita + amines) was coined in 1912 by Casimir Funk, who believed that these compounds were amines.
James Malone
CHEBI:33229
vitaminas
Ele Holloway
James Malone
SCH
Ele Holloway
James Malone
HaCaT
Tomasz Adamusiak
somite 4
ZFA:0000857
copper(II) chloride
7447-39-4
copper chloride; CuCl2
NCIt:C12692
CSF[accessedResource: NCIt:C12692][accessDate: 04-11-2010]
spinal fluid
CSF
The fluid that is contained within the brain ventricles, the subarachnoid space and the central canal of the spinal cord.
The serumlike fluid that circulates through the ventricles of the brain, the cavity of the spinal cord, and the subarachnoid space, functioning in shock absorption.
Cerebral Spinal Fluid[accessedResource: NCIt:C12692][accessDate: 04-11-2010]
cerebrospinal fluid
The serumlike fluid that circulates through the ventricles of the brain, the cavity of the spinal cord, and the subarachnoid space, functioning in shock absorption.[accessedResource: BTO:0000237][accessDate: 04-11-2010]
BTO:0000237
James Malone
Cerebral Spinal Fluid
spinal fluid[accessedResource: BTO:0000237][accessDate: 04-11-2010]
The fluid that is contained within the brain ventricles, the subarachnoid space and the central canal of the spinal cord.[accessedResource: NCIt:C12692][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0001564
Natural compounds consisting of a trisaccharide repeating unit (two heptose units and octulosonic acid) with oligosaccharide side chains and 3-hydroxytetradecanoic acid units (they are a major constituent of the cell walls of Gram-negative bacteria).
lipopolysaccharide
CHEBI:16412
LPS
lipopolysaccharides
Tomasz Adamusiak
ILSXISS107/TejJ
http://jaxmice.jax.org/strain/009290.html
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#fmol[accessedResource: MO_689][accessDate: 04-11-2010]
true
James Malone
MO_689
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001797
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#fmol
femtomole
A substance unit equal to 10^[-15] mol.
fmol
A femtomole is a substance unit equal to 10^-15 mol.
Tomasz Adamusiak
James Malone
NIH3T3
James Malone
GeneRIF:15087111
Leyden-Mbius muscular dystrophy
SNOMEDCT:93153005
A heterogenous group of inherited muscular dystrophy that can be autosomal dominant or autosomal recessive. There are many forms (called LGMDs) involving genes encoding muscle membrane proteins such as the sarcoglycan (SARCOGLYCANS) complex that interacts with DYSTROPHIN. The disease is characterized by progressing wasting and weakness of the proximal muscles of arms and legs around the HIPS and SHOULDERS (the pelvic and shoulder girdles).
GeneRIF:15385448
GeneRIF:14600260
GeneRIF:14981167
GeneRIF:11891182
Erb's muscular dystrophy
GeneRIF:11741828
MSH:D049288
GeneRIF:12032588
Leyden-Möbius muscular dystrophy
limb-girdle muscular dystrophy
Leyden-Mbius muscular dystrophy[accessedResource: DOID:11724][accessDate: 04-11-2010]
calpainopathy
GeneRIF:15351423
GeneRIF:11822024
DOID:11724
Leyden-Möbius muscular dystrophy[accessedResource: SNOMEDCT:93153005][accessDate: 04-11-2010]
GeneRIF:12499399
Limb-girdle muscular dystrophy (disorder)
A heterogenous group of inherited muscular dystrophy that can be autosomal dominant or autosomal recessive. There are many forms (called LGMDs) involving genes encoding muscle membrane proteins such as the sarcoglycan (SARCOGLYCANS) complex that interacts with DYSTROPHIN. The disease is characterized by progressing wasting and weakness of the proximal muscles of arms and legs around the HIPS and SHOULDERS (the pelvic and shoulder girdles).[accessedResource: MSH:D049288][accessDate: 04-11-2010]
GeneRIF:16344347
Limb-girdle muscular dystrophy (disorder)[accessedResource: SNOMEDCT:93153005][accessDate: 04-11-2010]
Leyden-Mobius muscular dystrophy[accessedResource: SNOMEDCT:93153005][accessDate: 04-11-2010]
Limb Girdle Muscular Dystrophies[accessedResource: MSH:D049288][accessDate: 04-11-2010]
Leyden-Mobius muscular dystrophy
GeneRIF:12428213
limb-girdle muscular dystrophies
A cell of the strip of specialized ectoderm flanking each side of the embryonal neural plate, which after the closure of the neural tube, forms a column of isolated cells along the dorsal aspect of the neural tube. Most of the cranial and all of the spinal sensory ganglion cells arise by differentiation of neural crest cells.[accessedResource: CL:0000333][accessDate: 04-11-2010]
James Malone
A cell of the strip of specialized ectoderm flanking each side of the embryonal neural plate, which after the closure of the neural tube, forms a column of isolated cells along the dorsal aspect of the neural tube. Most of the cranial and all of the spinal sensory ganglion cells arise by differentiation of neural crest cells.
neural crest cell
CL:0000333
Ele Holloway
James Malone
NCI-H1666
CL:0000222
A cell of the middle germ layer of the embryo.[accessedResource: CL:0000222][accessDate: 04-11-2010]
mesoblast[accessedResource: CL:0000222][accessDate: 04-11-2010]
mesodermal cell
mesoderm cell[accessedResource: CL:0000222][accessDate: 04-11-2010]
mesoderm cell
mesoblast
James Malone
A cell of the middle germ layer of the embryo.
NCIt:C12806
Cranial Nerve V[accessedResource: NCIt:C12806][accessDate: 04-11-2010]
trigeminus[accessedResource: BTO:0001072][accessDate: 04-11-2010]
trigeminal nerve
Nervus Trigeminus[accessedResource: NCIt:C12806][accessDate: 04-11-2010]
Nervus Trigeminus
trigeminus
BTO:0001072
Fifth Cranial Nerve
The fifth set of paired nerves of the face that emerge from the brain steam. These nerves have sensory and motor functions in the face, oral cavity, and nasal cavity.[accessedResource: NCIt:C12806][accessDate: 04-11-2010]
The fifth set of paired nerves of the face that emerge from the brain steam. These nerves have sensory and motor functions in the face, oral cavity, and nasal cavity.
Either of the fifth pair of cranial nerves, having sensory and motor functions in the face, teeth, mouth, and nasal cavity.
Cranial Nerve V
Either of the fifth pair of cranial nerves, having sensory and motor functions in the face, teeth, mouth, and nasal cavity.[accessedResource: BTO:0001072][accessDate: 04-11-2010]
Fifth Cranial Nerve[accessedResource: NCIt:C12806][accessDate: 04-11-2010]
James Malone
Ele Holloway
James Malone
OV90
(1E)-1-(4-chlorophenyl)-4,4-dimethyl-2-(1H-1,2,4-triazol-1-yl)pent-1-en-3-ol
CC(C)(C)C(O)C(\\n1cncn1)=C/c1ccc(Cl)cc1
InChIKey=YNWVFADWVLCOPU-MDWZMJQEBY
A secondary alcohol that has formula C15H18ClN3O.
InChI=1/C15H18ClN3O/c1-15(2,3)14(20)13(19-10-17-9-18-19)8-11-4-6-12(16)7-5-11/h4-10,14,20H,1-3H3/b13-8+
CHEBI:38000
http://www.ebi.ac.uk/efo/EFO_0001633
(E)-(+-)-beta-((4-chlorophenyl)methylene)-alpha-(1,1-dimethylethyl)-1H-1,2,4-triazole-1-ethanol
uniconazole-P
C15H18ClN3O
uniconazole
A triazole that has formula C15H18ClN3O.
Myeloencephalitis
MSH:D004679
SNOMEDCT:230196000
Encephalomyelitis, NOS[accessedResource: SNOMEDCT:62950007][accessDate: 04-11-2010]
encephalomyelitis
GeneRIF:15310853
MYELOENCEPH
Encephalomyelitis (disorder)[accessedResource: DOID:640][accessDate: 04-11-2010]
Encephalitis/myelitis NOS[accessedResource: DOID:640][accessDate: 04-11-2010]
GeneRIF:12496452
Encephalitis &/or myelitis
James Malone
Myeloencephalitides[accessedResource: MSH:D004679][accessDate: 04-11-2010]
ENCEPH INFLAMM[accessedResource: MSH:D004679][accessDate: 04-11-2010]
NCIt:C34580
DOID:640
A general term indicating inflammation of the BRAIN and SPINAL CORD, often used to indicate an infectious process, but also applicable to a variety of autoimmune and toxic-metabolic conditions. There is significant overlap regarding the usage of this term and ENCEPHALITIS in the literature.
Encephalomyelitis NOS (disorder)[accessedResource: DOID:640][accessDate: 04-11-2010]
Encephalomyelitis NOS
Inflammatory Encephalomyelitis[accessedResource: MSH:D004679][accessDate: 04-11-2010]
Myeloencephalitis[accessedResource: MSH:D004679][accessDate: 04-11-2010]
SNOMEDCT:62950007
A general term indicating inflammation of the BRAIN and SPINAL CORD, often used to indicate an infectious process, but also applicable to a variety of autoimmune and toxic-metabolic conditions. There is significant overlap regarding the usage of this term and ENCEPHALITIS in the literature.[accessedResource: MSH:D004679][accessDate: 04-11-2010]
MYELOENCEPH[accessedResource: MSH:D004679][accessDate: 04-11-2010]
ENCEPH INFLAMM
Encephalitis/myelitis NOS (disorder)[accessedResource: DOID:640][accessDate: 04-11-2010]
Inflammatory Encephalomyelitis
Encephalomyelitis (disorder)
Encephalitis/myelitis NOS
Encephalitis/myelitis NOS (disorder)
Encephalitis &/or myelitis[accessedResource: DOID:640][accessDate: 04-11-2010]
Myeloencephalitides
Encephalomyelitis NOS (disorder)
GeneRIF:15754326
Carcinoma of Lung[accessedResource: NCIt:C4878][accessDate: 04-11-2010]
A carcinoma that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis.
James Malone
GeneRIF:16038795
lung carcinoma
GeneRIF:12452048
GeneRIF:15456784
GeneRIF:11857309
A carcinoma that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis.[accessedResource: DOID:3905][accessDate: 04-11-2010]
GeneRIF:12021930
Lung Cancer[accessedResource: NCIt:C4878][accessDate: 04-11-2010]
GeneRIF:16125822
GeneRIF:12115568
cancer of lung[accessedResource: DOID:3905][accessDate: 04-11-2010]
Carcinoma of the Lung[accessedResource: NCIt:C4878][accessDate: 04-11-2010]
GeneRIF:11844598
GeneRIF:15221958
GeneRIF:12819188
GeneRIF:15242764
GeneRIF:15041706
GeneRIF:15756594
Cancer of the Lung[accessedResource: NCIt:C4878][accessDate: 04-11-2010]
A carcinoma originating in the lung. Lung carcinomas usually arise from the epithelium that lines the bronchial tree (bronchogenic carcinomas), and are classified as small cell or non-small cell carcinomas. Non-small cell lung carcinomas are usually adenocarcinomas, squamous cell carcinomas, or large cell carcinomas. Metastatic carcinomas to the lung are also common, and can be difficult to distinguish from primary tumors.
NCIt:C4878
Carcinoma of the Lung
GeneRIF:16052521
Lung Cancer
A carcinoma originating in the lung. Lung carcinomas usually arise from the epithelium that lines the bronchial tree (bronchogenic carcinomas), and are classified as small cell or non-small cell carcinomas. Non-small cell lung carcinomas are usually adenocarcinomas, squamous cell carcinomas, or large cell carcinomas. Metastatic carcinomas to the lung are also common, and can be difficult to distinguish from primary tumors.[accessedResource: NCIt:C4878][accessDate: 04-11-2010]
GeneRIF:11807786
Cancer of Lung
GeneRIF:11939413
DOID:3905
GeneRIF:15086519
GeneRIF:15782117
Cancer of the Lung
GeneRIF:12162425
GeneRIF:12067477
GeneRIF:11920544
GeneRIF:12581892
carcinoma OF LUNG
true
Precursor Lymphoblastic Leukemia/Lymphoma
A neoplasm of immature malignant lymphocytes (lymphoblasts) committed to the B-cell or T-cell lineage. Neoplasms involving the bone marrow and the peripheral blood are called precursor lymphoblastic leukemias or acute lymphoblastic leukemias. Neoplasms involving primarily lymph nodes or extranodal sites are called lymphoblastic lymphomas. -- 2003[accessedResource: NCIt:C7055][accessDate: 10-05-2010]
obsolete_acute lymphoblastic leukemia
ALL
A neoplasm of immature malignant lymphocytes (lymphoblasts) committed to the B-cell or T-cell lineage. Neoplasms involving the bone marrow and the peripheral blood are called precursor lymphoblastic leukemias or acute lymphoblastic leukemias. Neoplasms involving primarily lymph nodes or extranodal sites are called lymphoblastic lymphomas. -- 2003
Precursor Lymphoid Neoplasm
NCIt:C7055
Precursor Lymphoid Neoplasm[accessedResource: NCIt:C7055][accessDate: 10-05-2010]
James Malone
1.5
DOID:5600
Precursor Lymphoblastic Leukemia/Lymphoma[accessedResource: NCIt:C7055][accessDate: 10-05-2010]
Duplicate with acute lymphocytic leukemia (EFO_0000220)
Hypopharynx[accessedResource: NCIt:C12246][accessDate: 04-11-2010]
The lower part of the pharynx that connects to the esophagus.[accessedResource: NCIt:C12246][accessDate: 04-11-2010]
NCIt:C12246
The portion of the pharynx that lies below the upper edge of the epiglottis and opens into the larynx and esophagus.[accessedResource: BTO:0001740][accessDate: 04-11-2010]
hypopharynx
BTO:0001740
laryngopharynx
The portion of the pharynx that lies below the upper edge of the epiglottis and opens into the larynx and esophagus.
James Malone
The lower part of the pharynx that connects to the esophagus.
pars laryngea pharyngis[accessedResource: BTO:0001740][accessDate: 04-11-2010]
pars laryngea pharyngis
James Malone
HEK-293H
James Malone
metastatic prostate cancer
FMAID:7183
Upper extremity
A limb (as an arm, wing, fin, or leg) that is situated anteriorly.[accessedResource: BTO:0001729][accessDate: 04-11-2010]
XAO:0003030
EMAPA:17412
upper limb
MAT:0000394
BTO:0001729
forelimb
James Malone
Upper limb[accessedResource: FMAID:7183][accessDate: 04-11-2010]
Upper extremity[accessedResource: FMAID:7183][accessDate: 04-11-2010]
A limb (as an arm, wing, fin, or leg) that is situated anteriorly.
EV:0100014
MA:0000025
Superior member
Superior member[accessedResource: FMAID:7183][accessDate: 04-11-2010]
SAEL:42
EHDAA:6208
Tomasz Adamusiak
tooth 5V
ZFA:0001142
Tomasz Adamusiak
mild heart failure
NYHA class II
Tomasz Adamusiak
pineal complex
ZFA:0001359
endometrioid carcinoma
GeneRIF:14599866
Adenocarcinomas, Endometrioid
Endometrioid adenocarcinoma
Endometrioid cystadenocarcinoma[accessedResource: SNOMEDCT:30289006][accessDate: 04-11-2010]
Female Reproductive Endometrioid Carcinoma[accessedResource: NCIt:C3769][accessDate: 04-11-2010]
An adenocarcinoma characterized by the presence of cells resembling the glandular cells of the ENDOMETRIUM. It is a common histological type of ovarian CARCINOMA and ENDOMETRIAL CARCINOMA. There is a high frequency of co-occurrence of this form of adenocarcinoma in both tissues.
NCIt:C3769
endometrioid carcinoma (morphologic abnormality)[accessedResource: DOID:3000][accessDate: 04-11-2010]
Endometrioid cystadenocarcinoma
GeneRIF:11748987
Endometrioid Adenocarcinomas[accessedResource: MSH:D018269][accessDate: 04-11-2010]
DOID:3000
An adenocarcinoma characterized by the presence of cells resembling the glandular cells of the ENDOMETRIUM. It is a common histological type of ovarian CARCINOMA and ENDOMETRIAL CARCINOMA. There is a high frequency of co-occurrence of this form of adenocarcinoma in both tissues.[accessedResource: MSH:D018269][accessDate: 04-11-2010]
Carcinomas, Endometrioid[accessedResource: MSH:D018269][accessDate: 04-11-2010]
GeneRIF:14559803
Endometrioid Carcinoma of the Female Reproductive System
Endometrioid carcinoma (morphologic abnormality)
An adenocarcinoma characterized by the presence of malignant glandular epithelial cells resembling endometrial cells. It can arise from the uterine body, ovary, fallopian tube, cervix, vagina, and uterine ligament.
GeneRIF:11957146
GeneRIF:15781627
An adenocarcinoma characterized by the presence of malignant glandular epithelial cells resembling endometrial cells. It can arise from the uterine body, ovary, fallopian tube, cervix, vagina, and uterine ligament.[accessedResource: NCIt:C3769][accessDate: 04-11-2010]
GeneRIF:14559989
endometrioid carcinoma of female Reproductive system
Female Reproductive Endometrioid Carcinoma
Endometrioid Carcinomas
MSH:D018269
Endometrioid Carcinoma of Female Reproductive System[accessedResource: NCIt:C3769][accessDate: 04-11-2010]
James Malone
Endometrioid Carcinoma of the Female Reproductive System[accessedResource: NCIt:C3769][accessDate: 04-11-2010]
Adenocarcinoma, Endometrioid[accessedResource: MSH:D018269][accessDate: 04-11-2010]
SNOMEDCT:30289006
James Malone
CS57515 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311936
CS57515
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311936
Ele Holloway
James Malone
U2OS
U2-OS
4-Amino-1-beta-D-ribofuranosyl-s-triazin-2(1H)-one
Azacitidine
http://www.ebi.ac.uk/efo/EFO_0002667
InChIKey=NMUSYJAQQFHJEW-QUSQBIOGDY
4-amino-1-beta-D-ribofuranosyl-1,3,5-triazin-2(1H)-one
InChI=1/C8H12N4O5/c9-7-10-2-12(8(16)11-7)6-5(15)4(14)3(1-13)17-6/h2-6,13-15H,1H2,(H2,9,11,16)/t3-,4-,5-,6-/m1/s1/f/h9H2
A N-glycosyl-1,3,5-triazine that has formula C8H12N4O5.
Nc1ncn([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)n1
CHEBI:2038
C8H12N4O5
5-azacytidine
James Malone
facioscapulohumeral muscular dystrophy
Muscular dystrophy, Landouzy-Dejerine[accessedResource: DOID:11727][accessDate: 04-11-2010]
Facioscapulohumeral Atrophy
An autosomal dominant degenerative muscle disease characterized by slowly progressive weakness of the muscles of the face, upper-arm, and shoulder girdle. The onset of symptoms usually occurs in the first or second decade of life. Affected individuals usually present with impairment of upper extremity elevation. This tends to be followed by facial weakness, primarily involving the orbicularis oris and orbicularis oculi muscles. (Neuromuscul Disord 1997;7(1):55-62; Adams et al., Principles of Neurology, 6th ed, p1420)[accessedResource: MSH:D020391][accessDate: 04-11-2010]
GeneRIF:15520407
SNOMEDCT:399091004
Landouzy-Dejerine Dystrophies[accessedResource: MSH:D020391][accessDate: 04-11-2010]
FMD - Facioscapulohumeral muscular dystrophy[accessedResource: SNOMEDCT:399091004][accessDate: 04-11-2010]
GeneRIF:12874395
Atrophies, Facioscapulohumeral
DOID:11727
GeneRIF:15551024
FSHD - Facioscapulohumeral muscular dystrophy
Landouzy Dejerine muscular dystrophy
Atrophy, Facioscapulohumeral[accessedResource: MSH:D020391][accessDate: 04-11-2010]
Landouzy Dejerine Dystrophy
Fascioscapulohumeral muscular dystrophy
MSH:D020391
FSHD - Facioscapulohumeral muscular dystrophy[accessedResource: SNOMEDCT:399091004][accessDate: 04-11-2010]
Muscular Dystrophies, Facioscapulohumeral
FSH - Facioscapulohumeral muscular dystrophy
FSH - Facioscapulohumeral muscular dystrophy[accessedResource: SNOMEDCT:399091004][accessDate: 04-11-2010]
Progressive Muscular Dystrophy, Facioscapulohumeral Type[accessedResource: MSH:D020391][accessDate: 04-11-2010]
Facioscapulohumeral muscular dystrophy (disorder)
Fascioscapulohumeral muscular dystrophy[accessedResource: SNOMEDCT:399091004][accessDate: 04-11-2010]
Facioscapulohumeral Type Progressive Muscular Dystrophy
Landouzy-Déjérine muscular dystrophy[accessedResource: SNOMEDCT:399091004][accessDate: 04-11-2010]
Landouzy Dejerine Dystrophy[accessedResource: MSH:D020391][accessDate: 04-11-2010]
Muscular Dystrophies, Facioscapulohumeral[accessedResource: MSH:D020391][accessDate: 04-11-2010]
Facioscapulohumeral muscular dystrophy (disorder)[accessedResource: SNOMEDCT:399091004][accessDate: 04-11-2010]
An autosomal dominant degenerative muscle disease characterized by slowly progressive weakness of the muscles of the face, upper-arm, and shoulder girdle. The onset of symptoms usually occurs in the first or second decade of life. Affected individuals usually present with impairment of upper extremity elevation. This tends to be followed by facial weakness, primarily involving the orbicularis oris and orbicularis oculi muscles. (Neuromuscul Disord 1997;7(1):55-62; Adams et al., Principles of Neurology, 6th ed, p1420)
Dystrophies, Landouzy-Dejerine
Landouzy-Déjérine muscular dystrophy
FMD - Facioscapulohumeral muscular dystrophy
Atrophies, Facioscapulohumeral[accessedResource: MSH:D020391][accessDate: 04-11-2010]
James Malone
gastrula germ-ring
ZFS:0000018
hippocampus[accessedResource: MAT:0000114][accessDate: 04-11-2010]
fascia dentata[accessedResource: NIFSTD:birnlex_1178][accessDate: 04-11-2010]
A serrated strip of gray matter under the medial border of the hippocampus and in its depths; it is an archaeocortex which develops along the edge of the hippocampal fissure and which consists of molecular, granular, and polymorphic layers.[accessedResource: BTO:0002496][accessDate: 04-11-2010]
dentate gyrus
NIFSTD:birnlex_1178
hippocampus
MAT:0000114
EMAPA:19148
Tomasz Adamusiak
BTO:0002496
MA:0000191
A serrated strip of gray matter under the medial border of the hippocampus and in its depths; it is an archaeocortex which develops along the edge of the hippocampal fissure and which consists of molecular, granular, and polymorphic layers.
EV:0100180
SAEL:51
fascia dentata
gyrus dentatus[accessedResource: BTO:0002496][accessDate: 04-11-2010]
James Malone
gyrus dentatus
James Malone
true
1.5
duplication with glioblastoma (EFO_0000519)
obsolete_brain tumor glioblastoma
neuroglial cell[accessedResource: BTO:0000524][accessDate: 04-11-2010]
James Malone
neuroglia
neuroglia[accessedResource: CL:0000125][accessDate: 04-11-2010]
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons.
mixed glial cells
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons. (Reichenbach and Wolburg)
neuroglia cell
BTO:0000524
Tomasz Adamusiak
NIFSTD:sao313023570
CL:0000125
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons.[accessedResource: CL:0000125][accessDate: 04-11-2010]
glia[accessedResource: NIFSTD:sao313023570][accessDate: 04-11-2010]
MERGED DEFINITION:nTARGET DEFINITION: The delicate network of branched cells and fibers that supports the tissue of the central nervous system.n--------------------nSOURCE DEFINITION: The cells of the supportive tissue of the central nervous system (neuroglia). These non-neural cells are of three kinds: astrocytes, oligodendrocytes (collectively termed macroglia) and microglia.
glial cell
neuroglia cell[accessedResource: BTO:0000524][accessDate: 04-11-2010]
MERGED DEFINITION:nTARGET DEFINITION: The delicate network of branched cells and fibers that supports the tissue of the central nervous system.n--------------------nSOURCE DEFINITION: The cells of the supportive tissue of the central nervous system (neuroglia). These non-neural cells are of three kinds: astrocytes, oligodendrocytes (collectively termed macroglia) and microglia.[accessedResource: BTO:0000524][accessDate: 04-11-2010]
glia
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons. (Reichenbach and Wolburg)[accessedResource: NIFSTD:sao313023570][accessDate: 04-11-2010]
neuroglial cell
[M]Chondrosarcoma NOS (morphologic abnormality)
GeneRIF:15499569
GeneRIF:16157221
Chondrosarcoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:14990007][accessDate: 04-11-2010]
GeneRIF:11776394
GeneRIF:15694358
chondrosarcoma of bone[accessedResource: DOID:3371][accessDate: 04-11-2010]
GeneRIF:15316669
James Malone
Chondrosarcoma, no ICD-O subtype (morphologic abnormality)
A malignant mesenchymal tumor arising from cartilage-forming tissues involving the bones. It affects middle-aged to elderly adults, and the pelvic bones, ribs, shoulder girdle, and long bones are the most common sites of involvement. Most chondrosarcomas arise de novo, but some may develop in a preexisting benign cartilaginous lesion.
GeneRIF:15534109
chondrosarcoma (morphologic abnormality)
Chondrosarcoma, NOS[accessedResource: SNOMEDCT:14990007][accessDate: 04-11-2010]
Chondrosarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:14990007][accessDate: 04-11-2010]
A slowly growing malignant neoplasm derived from cartilage cells, occurring most frequently in pelvic bones or near the ends of long bones, in middle-aged and old people. Most chondrosarcomas arise de novo, but some may develop in a preexisting benign cartilaginous lesion or in patients with ENCHONDROMATOSIS. (Stedman, 25th ed)
DOID:3371
Chondrosarcoma, no ICD-O subtype[accessedResource: SNOMEDCT:14990007][accessDate: 04-11-2010]
GeneRIF:12021923
GeneRIF:12736724
chondrosarcoma
[M]Chondrosarcoma NOS
MSH:D002813
GeneRIF:16288985
A malignant mesenchymal tumor arising from cartilage-forming tissues involving the bones. It affects middle-aged to elderly adults, and the pelvic bones, ribs, shoulder girdle, and long bones are the most common sites of involvement. Most chondrosarcomas arise de novo, but some may develop in a preexisting benign cartilaginous lesion.[accessedResource: NCIt:C2946][accessDate: 04-11-2010]
GeneRIF:15226640
Fibrochondrosarcoma[accessedResource: SNOMEDCT:14990007][accessDate: 04-11-2010]
A slowly growing malignant neoplasm derived from cartilage cells, occurring most frequently in pelvic bones or near the ends of long bones, in middle-aged and old people. Most chondrosarcomas arise de novo, but some may develop in a preexisting benign cartilaginous lesion or in patients with ENCHONDROMATOSIS. (Stedman, 25th ed)[accessedResource: MSH:D002813][accessDate: 04-11-2010]
Chondrosarcoma, NOS
Chondrosarcoma, no ICD-O subtype
Chondrosarcoma morphology[accessedResource: SNOMEDCT:14990007][accessDate: 04-11-2010]
GeneRIF:15475194
GeneRIF:12618336
[M]Chondrosarcoma NOS[accessedResource: SNOMEDCT:189886003][accessDate: 04-11-2010]
Chondrosarcoma morphology
GeneRIF:14587027
chondrosarcoma NOS (morphologic abnormality)
GeneRIF:15796962
Chondrosarcomas
SNOMEDCT:14990007
chondrosarcoma NOS (morphologic abnormality)[accessedResource: DOID:3371][accessDate: 04-11-2010]
[M]Chondrosarcoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189886003][accessDate: 04-11-2010]
Chondrosarcomas[accessedResource: MSH:D002813][accessDate: 04-11-2010]
SNOMEDCT:189886003
Fibrochondrosarcoma
chondrosarcoma of bone
NCIt:C2946
James Malone
A temporal measure of the length of time that a patient will remain alive without the disease getting worse.
distant metastasis free survival
arsenic
23886
3886
7440-38-2
As
arsenic
Denotes the inhabitants of China, a person from there, or their descendants elsewhere.[accessedResource: NCIt:C43391][accessDate: 04-11-2010]
Tomasz Adamusiak
Denotes the inhabitants of China, a person from there, or their descendants elsewhere.
Chinese
NCIt:C43391
James Malone
distal end of femur
Distal is a geometric modifier describing the point furthest from the point of attachment to the body or to some point of origin. For example, distal end of femur.
distal
MAT:0000486
STRUCTURE_Formula:C20H28ClNO3
DSSTox_CID:22576
A 77636 hydrochloride
CASRN:145307-34-2
DSSTox_Generic_SID:42576
STRUCTURE_ChemicalName_IUPAC:(1R,3S)-1-(aminomethyl)-3-(tricyclo[3.3.1.13,7]dec-1-yl)-3,4-dihydro-1H-isochromene-5,6-diol hydrochloride
Tomasz Adamusiak
James Malone
Ele Holloway
Ele Holloway
James Malone
KHOS240S
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#vortexer[accessedResource: MO_983][accessDate: 04-11-2010]
vortex_mixer
Tomasz Adamusiak
A vortexer is an instrument that mixes small vials of liquid by creating a rotation of the liquid around its own center. It consists of an electric motor with the drive shaft oriented vertically and attached to a cupped rubber piece mounted slightly off-center. As the motor runs the rubber piece oscillates rapidly in a circular motion. When a test tube or other appropriate container is pressed into the rubber cup (or touched to its edge) the motion is transmitted to the liquid inside and a vortex is created.
vortexer
http://www.ebi.ac.uk/efo/EFO_0002027
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#vortexer
Jie Zheng
James Malone
MO_983
Tomasz Adamusiak
anterior lateral line system
ZFA:0001468
James Malone
dorsal trunk specific anlage
FBbt:00005489
A planned process with the objective to produce information about some evaluant
A hybridization on a microarray.
http://www.ebi.ac.uk/efo/EFO_0001455
James Malone
measuring
assay
OBI_0000070
scientific observation
An assay is a process with the objective to create as an output information about a material entity (bearing evaluant role).
A planned process with the objective to produce information about some evaluant
Tomasz Adamusiak
pole plasm
FBbt:00004891
The stage in life when sex glands become functional. It is characterized by the development of secondary sex characteristics, reproductive functions, and growth spurts.[accessedResource: NCIt:C82393][accessDate: 04-11-2010]
James Malone
Tomasz Adamusiak
The stage in life when sex glands become functional. It is characterized by the development of secondary sex characteristics, reproductive functions, and growth spurts.
puberty
NCIt:C82393
HL-60 cell[accessedResource: BTO:0000738][accessDate: 04-11-2010]
Human acute myeloid leukemia established from the peripheral blood of a 35-year-old woman with acute myeloid leukemia (AML FAB M2) in 1976.[accessedResource: BTO:0000738][accessDate: 04-11-2010]
HL-60
HL60 cell[accessedResource: BTO:0000738][accessDate: 04-11-2010]
HL-60 is a cell line which is the bearer of human acute myeloid leukemia established from the peripheral blood of a 35-year-old woman with acute myeloid leukemia (AML FAB M2) in 1976.
HL-60 cell
HL60
BTO:0000738
Human acute myeloid leukemia established from the peripheral blood of a 35-year-old woman with acute myeloid leukemia (AML FAB M2) in 1976.
HL60 cell
James Malone
CS57624 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158648&type=germplasm
CS57624
http://www.arabidopsis.org/servlets/TairObject?id=1005158648&type=germplasm
Tomasz Adamusiak
SK-MEL-28
MCC:0000426
James Malone
CS57512 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311933
CS57512
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311933
gene
Tomasz Adamusiak
mesenchyme pectoral fin
ZFA:0001000
Tomasz Adamusiak
somite 2
ZFA:0000728
Helen Parkinson
SNP array is a DNA array used to detect polymorphisms in DNA samples
SNP array
An embryo made up of two groups of cells. One group will develop into the fetus and the other will become the placenta.
James Malone
blastocyst
An embryo made up of two groups of cells. One group will develop into the fetus and the other will become the placenta.[accessedResource: NCIt:C13739][accessDate: 04-11-2010]
Blastosphere
NCIt:C13739
Blastula[accessedResource: NCIt:C13739][accessDate: 04-11-2010]
The modified blastula of a placental mammal.[accessedResource: BTO:0001099][accessDate: 04-11-2010]
Blastula
Blastosphere[accessedResource: NCIt:C13739][accessDate: 04-11-2010]
The modified blastula of a placental mammal.
BTO:0001099
Ele Holloway
James Malone
SW780
Helen Parkinson
Agressive behaviour is the process of engaging on hostile, affective, or retaliatory aggression and instrumental, predatory, or goal-oriented aggression towards other individuals.
aggressive behavior
aggression
aggressive behaviour
Tomasz Adamusiak
anterior lateral mesoderm
ZFA:0005039
BTO:0001006
The inferior portion of the trunk of the body, bounded anteriorly and laterally by the two hip bones and posteriorly by the sacrum and coccyx. The pelvis is divided by a plane passing through the terminal lines into the p. major superiorly and the p. minor inferiorly.
The inferior portion of the trunk of the body, bounded anteriorly and laterally by the two hip bones and posteriorly by the sacrum and coccyx. The pelvis is divided by a plane passing through the terminal lines into the p. major superiorly and the p. minor inferiorly.[accessedResource: BTO:0001006][accessDate: 04-11-2010]
pelvis
http://sig.biostr.washington.edu/fma3.0#Pelvis
Subdivision of abdomen, which is demarcated from the abdomen proper by the plane of the superior pelvic aperture, and from the perineum by the inferior surface of the pelvic diaphragm; together with the abdomen proper, it constitutes the abdomen. Examples: There is only one pelvis.
Human breast adenocarcinoma, established from the pleural effusion of a 69-year-old caucasian woman with metastatic mammary carcinoma (after radio- and hormone therapy) in 1970; cells were described of being positive for cytoplasmic estrogen receptors and having the capability to form domes.
MCF7 cell[accessedResource: BTO:0000093][accessDate: 04-11-2010]
BTO:0000093
MCF7
MCF-7 cell
MCF-7 cell[accessedResource: BTO:0000093][accessDate: 04-11-2010]
MCF7 cell
MCF-7
James Malone
MCC:0000307
Human breast adenocarcinoma, established from the pleural effusion of a 69-year-old caucasian woman with metastatic mammary carcinoma (after radio- and hormone therapy) in 1970; cells were described of being positive for cytoplasmic estrogen receptors and having the capability to form domes.[accessedResource: BTO:0000093][accessDate: 04-11-2010]
CHEBI:50646
James Malone
http://www.ebi.ac.uk/efo/EFO_0001892
An agent that inhibits bone resorption and/or favor bone mineralization and bone regeneration. Used to heal bone fractures and to treat metabolic bone diseases.
bone density conservation agent
James Malone
The total quantity or strength of a substance administered at one time.
dose
sulindac
http://www.ebi.ac.uk/efo/EFO_0001618
A sulfoxide that has formula C20H17FO3S.
sulindaco
Clinoril
InChI=1/C20H17FO3S/c1-12-17(9-13-3-6-15(7-4-13)25(2)24)16-8-5-14(21)10-19(16)18(12)11-20(22)23/h3-10H,11H2,1-2H3,(H,22,23)/b17-9-/f/h22H
James Malone
{(1Z)-5-fluoro-2-methyl-1-[4-(methylsulfinyl)benzylidene]-1H-inden-3-yl}acetic acid
(Z)-5-Fluoro-2-methyl-1-((p-(methylsulfinyl)phenyl)methylene)-1H-indene-3-acetic acid
CHEBI:9352
CC1=C(CC(O)=O)c2cc(F)ccc2\\C1=C/c3ccc(cc3)S(C)=O
cis-5-Fluoro-2-methyl-1-((4-(methylsulfinyl)phenyl)methylene)-1H-indene-3-acetic acid
InChIKey=MLKXDPUZXIRXEP-CFZDBRNIDX
Sulindacum
C20H17FO3S
cis-5-Fluoro-2-methyl-1-((p-methylsulfinyl)benzylidene)indene-3-acetic acid
Jie Zheng
Tomasz Adamusiak
Theiler stage 24
birnlex_7079
Antibiotika
James Malone
Antibiotikum
antibiotique
http://www.ebi.ac.uk/efo/EFO_0001485
antibiotics
Substance produced by, and obtained from, certain living cells (especially bacteria, yeasts and moulds), or an equivalent synthetic substance, which is biostatic or biocidal at low concentrations to some other form of life, especially pathogenic or noxious organisms.
antibiotic
James Malone
GM07055
MO_752
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#umol[accessedResource: MO_752][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0001801
Tomasz Adamusiak
umol
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#umol
James Malone
micromole
Jie Zheng
true
µmol
A substance unit equal to a millionth of a mol or 10^[-6] mol.
true
An absorbed dose unit which is equal to the absorption of one joule of radiation energy by one kilogram of matter.
Gray
Gy
A term used in the United States to categorize a population group comprised of persons having origins in any of the black racial groups of Africa. Includes population subgroups (e.g., Kenyan, Nigerian, Haitian). The concept refers also to individuals who classify themselves as described.
Black
African American
A term used in the United States to categorize a population group comprised of persons having origins in any of the black racial groups of Africa. Includes population subgroups (e.g., Kenyan, Nigerian, Haitian). The concept refers also to individuals who classify themselves as described.[accessedResource: NCIt:C16352][accessDate: 04-11-2010]
Black Populations
BLACK OR AFRICAN AMERICAN[accessedResource: NCIt:C16352][accessDate: 04-11-2010]
Afro American[accessedResource: NCIt:C16352][accessDate: 04-11-2010]
Black[accessedResource: NCIt:C16352][accessDate: 04-11-2010]
NCIt:C16352
Afro American
Black Populations[accessedResource: NCIt:C16352][accessDate: 04-11-2010]
BLACK OR AFRICAN AMERICAN
Tomasz Adamusiak
James Malone
hatching long-pec
ZFS:0000033
GRO:000543
PO:0009062
GRO:000543[accessedResource: BTO:0001733][accessDate: 04-11-2010]
The female reproductive organs of a flower; the pistil or pistils considered as a group.[accessedResource: BTO:0001733][accessDate: 04-11-2010]
The female reproductive organs of a flower; the pistil or pistils considered as a group.
BTO:0001733
gynoecium
James Malone
James Malone
http://www.ebi.ac.uk/efo/EFO_0001726
true
A month is a derived time unit which is approximately equal to the length of time of one of cycle of the moon's phases which is science is taken to be equal to 30 days.
A time unit which is approximately equal to the length of time of one of cycle of the moon's phases which is science is taken to be equal to 30 days.
month
UO:0000035
A non-neoplastic or neoplastic disorder affecting the heart or the vessels (arteries, veins and lymph vessels). Representative examples of non-neoplastic cardiovascular disorders are endocarditis and hypertension. Representative examples of neoplastic cardiovascular disorders are endocardial myxoma and angiosarcoma.[accessedResource: NCIt:C2931][accessDate: 04-11-2010]
GeneRIF:15683719
GeneRIF:11822583
GeneRIF:11935372
Other pericardial disease NOS
GeneRIF:12204797
Pathological conditions involving the CARDIOVASCULAR SYSTEM including the HEART; the BLOOD VESSELS; or the PERICARDIUM.[accessedResource: MSH:D002318][accessDate: 04-11-2010]
Disease of cardiovascular system[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
GeneRIF:12187094
GeneRIF:15531184
Other heart disease NOS[accessedResource: SNOMEDCT:195151008][accessDate: 04-11-2010]
Other ill-defined heart disease (disorder)[accessedResource: SNOMEDCT:266251004][accessDate: 04-11-2010]
Disease of cardiovascular system, NOS
SNOMEDCT:194962004
A non-neoplastic or neoplastic disorder affecting the heart or the vessels (arteries, veins and lymph vessels). Representative examples of non-neoplastic cardiovascular disorders are endocarditis and hypertension. Representative examples of neoplastic cardiovascular disorders are endocardial myxoma and angiosarcoma. -- 2003
GeneRIF:15459608
Disorder of circulatory system[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
A non-neoplastic or neoplastic disorder affecting the heart or the vessels (arteries, veins and lymph vessels). Representative examples of non-neoplastic cardiovascular disorders are endocarditis and hypertension. Representative examples of neoplastic cardiovascular disorders are endocardial myxoma and angiosarcoma.
MSH:D002318
[X]Other specified diseases of pericardium[accessedResource: SNOMEDCT:195553003][accessDate: 04-11-2010]
GeneRIF:16161810
GeneRIF:16260427
Circulatory system disease NOS (disorder)
disease of subdivision of hemolymphoid system
Disease of cardiovascular system, NOS[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
Disease affecting entire cardiovascular system (disorder)[accessedResource: SNOMEDCT:105980002][accessDate: 04-11-2010]
Other specified pericardial disease NOS
[X]Cardiovascular disease, unspecified[accessedResource: SNOMEDCT:195594006][accessDate: 04-11-2010]
Other diseases of pericardium (disorder)
Other heart disease[accessedResource: SNOMEDCT:266309008][accessDate: 04-11-2010]
Other forms of heart disease (disorder)
A body system disease which occurs in the blood, heart, blood vessels or the lymphatic system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells or lymph to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis.
SNOMEDCT:266239001
GeneRIF:15627719
[X]Other ill-defined heart diseases (disorder)
Other heart disease NOS (disorder)
[X]Other forms of heart disease
Cardiovascular Disease (CVD)[accessedResource: NCIt:C2931][accessDate: 04-11-2010]
Other sequelae of myocardial infarction, not elsewhere classified[accessedResource: ICD9:429.79][accessDate: 04-11-2010]
Other ill-defined heart disease NOS (disorder)[accessedResource: SNOMEDCT:195150009][accessDate: 04-11-2010]
Ill-defined descriptions and complications of heart disease
DOID:1287
DISEASES OF THE CIRCULATORY SYSTEM[accessedResource: ICD9:390-459.99][accessDate: 04-11-2010]
GeneRIF:15668644
Other forms of heart disease (disorder)[accessedResource: SNOMEDCT:194901009][accessDate: 04-11-2010]
GeneRIF:12476328
GeneRIF:15780820
GeneRIF:12431476
CVD, NOS[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
Other sequelae of myocardial infarction, not elsewhere classified
GeneRIF:12690916
[X]Other specified diseases of pericardium (disorder)
GeneRIF:12861348
[X]Other forms of heart disease (disorder)
[X]Other forms of heart disease[accessedResource: SNOMEDCT:195551001][accessDate: 04-11-2010]
ILL-DEFINED HRT DIS NEC
CVD, NOS
Disease of cardiovascular system (disorder)
ICD9:429.8
Other ill-defined heart diseases
ICD9:429.79
DISEASES OF THE CIRCULATORY SYSTEM
GeneRIF:16159596
GeneRIF:15939053
SNOMEDCT:195151008
[X]Other ill-defined heart diseases
SNOMEDCT:195594006
SNOMEDCT:266240004
Other heart disease NOS (disorder)[accessedResource: SNOMEDCT:195151008][accessDate: 04-11-2010]
GeneRIF:12669427
GeneRIF:15634270
GeneRIF:15823283
GeneRIF:15653176
GeneRIF:15735209
PAPILLARY MUSCLE DIS NEC
Other pericardial disease NOS (disorder)
SNOMEDCT:195150009
Certain sequelae of myocardial infarction, not elsewhere classified
Disorder of cardiovascular system (disorder)[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
Other ill-defined heart disease
GeneRIF:16028070
Other ill-defined heart disease (disorder)
Cardiovascular disease, unspecified
OTHER SEQUELAE OF MI NEC
SNOMEDCT:266241000
GeneRIF:16102632
SNOMEDCT:266309008
Other ill-defined heart disease NOS (disorder)
GeneRIF:15375785
Other forms of heart disease[accessedResource: SNOMEDCT:194901009][accessDate: 04-11-2010]
PERICARDIAL DISEASE NEC
GeneRIF:15116245
GeneRIF:15619076
GeneRIF:12201209
GeneRIF:15166781
ICD9:424
GeneRIF:16046727
GeneRIF:16132053
[X]Cardiovascular disease, unspecified (disorder)[accessedResource: SNOMEDCT:195594006][accessDate: 04-11-2010]
[X]Other ill-defined heart diseases (disorder)[accessedResource: SNOMEDCT:195588003][accessDate: 04-11-2010]
ICD9:429.89
GeneRIF:12052841
GeneRIF:12195022
GeneRIF:12818409
Other disorders of papillary muscle
Cardiovascular disease, NOS
GeneRIF:16224057
Other ill-defined heart disease NOS[accessedResource: SNOMEDCT:195150009][accessDate: 04-11-2010]
GeneRIF:15591764
CARDIOVASC DIS[accessedResource: MSH:D002318][accessDate: 04-11-2010]
Disorder of the circulatory system[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
GeneRIF:11934214
ICD9:423
CVD[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
Cardiovascular Disorders[accessedResource: NCIt:C2931][accessDate: 04-11-2010]
Disease of cardiovascular system (disorder)[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
Disease of cardiovascular system
Unspecified circulatory system disorder[accessedResource: ICD9:459.9][accessDate: 04-11-2010]
SNOMEDCT:105980002
GeneRIF:14967720
Cardiovascular disorder, NOS[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
Other diseases of pericardium
GeneRIF:15565175
GeneRIF:15240653
Cardiovascular Disease (CVD)
SNOMEDCT:266251004
GeneRIF:16103519
Disease affecting entire cardiovascular system[accessedResource: SNOMEDCT:105980002][accessDate: 04-11-2010]
GeneRIF:12898464
Other ill-defined heart disease[accessedResource: SNOMEDCT:266251004][accessDate: 04-11-2010]
GeneRIF:15363820
GeneRIF:11744804
GeneRIF:12943734
SNOMEDCT:195553003
GeneRIF:16018179
ICD9:429.81
GeneRIF:15780075
GeneRIF:14983217
GeneRIF:15008790
SNOMEDCT:195551001
Other diseases of endocardium (disorder)
Disorder of circulatory system
GeneRIF:12606536
disease of subdivision of hemolymphoid system[accessedResource: DOID:1287][accessDate: 04-11-2010]
GeneRIF:11821707
GeneRIF:15342688
ICD9:429
Other ill-defined heart diseases[accessedResource: ICD9:429.8][accessDate: 04-11-2010]
Other specified pericardial disease NOS (disorder)
SNOMEDCT:195588003
SNOMEDCT:49601007
SNOMEDCT:195646003
CVS disease
GeneRIF:15869613
GeneRIF:15257013
Other pericardial disease NOS (disorder)[accessedResource: SNOMEDCT:266240004][accessDate: 04-11-2010]
Other disorders of papillary muscle[accessedResource: ICD9:429.81][accessDate: 04-11-2010]
cardiovascular system disease[accessedResource: DOID:1287][accessDate: 04-11-2010]
Disorder of circulatory system, NOS[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
GeneRIF:15855354
Circulatory system disease NOS (disorder)[accessedResource: SNOMEDCT:195646003][accessDate: 04-11-2010]
Cardiovascular system disease
GeneRIF:12065317
GeneRIF:15282206
Certain sequelae of myocardial infarction, not elsewhere classified[accessedResource: ICD9:429.7][accessDate: 04-11-2010]
PERICARDIAL DISEASE NEC[accessedResource: ICD9:423.8][accessDate: 04-11-2010]
GeneRIF:12867276
Diseases, Cardiovascular
GeneRIF:15314690
ASCVD[accessedResource: ICD9:429.2][accessDate: 04-11-2010]
GeneRIF:12052142
ICD9:429.2
ICD9:390-459.99
Other pericardial disease NOS[accessedResource: SNOMEDCT:266240004][accessDate: 04-11-2010]
[X]Cardiovascular disease, unspecified (disorder)
Other heart disease (disorder)
Other specified pericardial disease NOS (disorder)[accessedResource: SNOMEDCT:266239001][accessDate: 04-11-2010]
Other diseases of endocardium
Other diseases of endocardium (disorder)[accessedResource: SNOMEDCT:266241000][accessDate: 04-11-2010]
Disorder of cardiovascular system[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
Other ill-defined heart disease NOS
Disorder of circulatory system, NOS
GeneRIF:16159602
Other forms of heart disease
Other diseases of pericardium (disorder)[accessedResource: SNOMEDCT:194962004][accessDate: 04-11-2010]
ILL-DEFINED HRT DIS NEC[accessedResource: ICD9:429.89][accessDate: 04-11-2010]
GeneRIF:15598684
[X]Cardiovascular disease, unspecified
ICD9:459.9
GeneRIF:15302608
GeneRIF:15528465
GeneRIF:12911596
Pathological conditions involving the CARDIOVASCULAR SYSTEM including the HEART; the BLOOD VESSELS; or the PERICARDIUM.
Cardiovascular disease, unspecified[accessedResource: ICD9:429.2][accessDate: 04-11-2010]
GeneRIF:11912547
GeneRIF:15648548
NCIt:C2931
[X]Other specified diseases of pericardium
Disorder of cardiovascular system
ASCVD
Cardiovascular disorder, NOS
GeneRIF:12056504
GeneRIF:15010202
GeneRIF:16324215
GeneRIF:15856070
GeneRIF:16109314
Disease affecting entire cardiovascular system
Circulatory system disease NOS
Cardiovascular Disorders
Ill-defined descriptions and complications of heart disease[accessedResource: ICD9:429][accessDate: 04-11-2010]
[X]Other specified diseases of pericardium (disorder)[accessedResource: SNOMEDCT:195553003][accessDate: 04-11-2010]
A body system disease which occurs in the blood, heart, blood vessels or the lymphatic system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells or lymph to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis.[accessedResource: DOID:1287][accessDate: 04-11-2010]
SNOMEDCT:194901009
GeneRIF:15618240
GeneRIF:12743009
Circulatory system disease NOS[accessedResource: SNOMEDCT:195646003][accessDate: 04-11-2010]
Other diseases of endocardium[accessedResource: SNOMEDCT:266241000][accessDate: 04-11-2010]
OTHER SEQUELAE OF MI NEC[accessedResource: ICD9:429.79][accessDate: 04-11-2010]
[X]Other ill-defined heart diseases[accessedResource: SNOMEDCT:195588003][accessDate: 04-11-2010]
Other specified diseases of pericardium[accessedResource: ICD9:423.8][accessDate: 04-11-2010]
Cardiovascular disease, NOS[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
PAPILLARY MUSCLE DIS NEC[accessedResource: ICD9:429.81][accessDate: 04-11-2010]
GeneRIF:14998943
GeneRIF:15351863
circulatory system disease
CVD
CARDIOVASC DIS
ICD9:420-429.99
CIRCULATORY DISEASE NOS
[X]Other forms of heart disease (disorder)[accessedResource: SNOMEDCT:195551001][accessDate: 04-11-2010]
Diseases, Cardiovascular[accessedResource: MSH:D002318][accessDate: 04-11-2010]
James Malone
Other heart disease (disorder)[accessedResource: SNOMEDCT:266309008][accessDate: 04-11-2010]
Disorder of cardiovascular system (disorder)
Other heart disease
Disease affecting entire cardiovascular system (disorder)
ICD9:423.8
CIRCULATORY DISEASE NOS[accessedResource: ICD9:459.9][accessDate: 04-11-2010]
Cardiovascular Disorder
cardiovascular disease
GeneRIF:12365916
Other heart disease NOS
Cardiovascular Disorder[accessedResource: NCIt:C2931][accessDate: 04-11-2010]
Disorder of the circulatory system
Other specified diseases of pericardium
GeneRIF:15226189
CVS disease[accessedResource: SNOMEDCT:49601007][accessDate: 04-11-2010]
Other specified pericardial disease NOS[accessedResource: SNOMEDCT:266239001][accessDate: 04-11-2010]
GeneRIF:11985486
GeneRIF:15340249
Other diseases of pericardium[accessedResource: SNOMEDCT:194962004][accessDate: 04-11-2010]
ICD9:429.7
GeneRIF:15750260
GeneRIF:15859024
Unspecified circulatory system disorder
GeneRIF:15576850
James Malone
plasma cell neoplasm
James Malone
Fisher344 is a rat strain as described in http://www.ratmap.org/ShowStrainDetails.html?strain=72
Fischer 344
http://www.ratmap.org/ShowStrainDetails.html?strain=72
F344
A0amnioser[accessedResource: FBbt:00005422][accessDate: 04-11-2010]
James Malone
amnioserosa anlage in statu nascendi
FBbt:00005422
A0amnioser
James Malone
A process whereby a stress state is applied parallel or tangential to a face of the material.
shear stressing
amoxicillinum
Clamoxyl
Amolin
[H][C@]12SC(C)(C)[C@@H](N1C(=O)[C@H]2NC(=O)[C@H](N)c1ccc(O)cc1)C(O)=O
alpha-amino-p-hydroxybenzylpenicillin
A penicillin in which the substituent at position 6 of the penam ring is a 2-amino-2-(4-hydroxyphenyl)acetamido group.
Moxal
Amopenixin
6-(p-hydroxy-alpha-aminophenylacetamido)penicillanic acid
A penicillin that has formula C16H19N3O5S.
http://www.ebi.ac.uk/efo/EFO_0002003
p-hydroxyampicillin
C16H19N3O5S
InChIKey=LSQZJLSUYDQPKJ-VLWBPTPADT
AX
Amoxicillin anhydrous
amoxycillin
amoxicilline
InChI=1/C16H19N3O5S/c1-16(2)11(15(23)24)19-13(22)10(14(19)25-16)18-12(21)9(17)7-3-5-8(20)6-4-7/h3-6,9-11,14,20H,17H2,1-2H3,(H,18,21)(H,23,24)/t9-,10-,11+,14-/m1/s1/f/h18,23H
CHEBI:2676
AMPC
James Malone
(2S,5R,6R)-6-{[(2R)-2-amino-2-(4-hydroxyphenyl)acetyl]amino}-3,3-dimethyl-7-oxo-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylic acid
amoxicilina
6beta-[(2R)-2-amino-2-(4-hydroxyphenyl)acetamido]-2,2-dimethylpenam-3alpha-carboxylic acid
amoxicillin
SNOMEDCT:128776008
An aggressive morphologic variant of chondrosarcoma. It is composed of a low grade chondrosarcoma and a high grade non-cartilagenous sarcomatous component. Due to the aggressive nature of the disease, its prognosis is poor.
Dedifferentiated chondrosarcoma (morphologic abnormality)
dedifferentiated chondrosarcoma
NCIt:C6476
James Malone
An aggressive morphologic variant of chondrosarcoma. It is composed of a low grade chondrosarcoma and a high grade non-cartilagenous sarcomatous component. Due to the aggressive nature of the disease, its prognosis is poor.[accessedResource: NCIt:C6476][accessDate: 04-11-2010]
DOID:5864
Dedifferentiated chondrosarcoma (morphologic abnormality)[accessedResource: DOID:5864][accessDate: 04-11-2010]
head and neck cancer, Thyroid
thyroid carcinoma
thyroid cancer
James Malone
head and neck cancer, Thyroid[accessedResource: DOID:3963][accessDate: 04-11-2010]
DOID:3963
James Malone
CS57709 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158733&type=germplasm
CS57709
http://www.arabidopsis.org/servlets/TairObject?id=1005158733&type=germplasm
Tomasz Adamusiak
intermediate cell mass of mesoderm
ZFA:0000033
InChI=1/C12H18O/c1-8(2)10-6-5-7-11(9(3)4)12(10)13/h5-9,13H,1-4H3
InChIKey=OLBCVFGFOZPWHH-UHFFFAOYAE
http://www.ebi.ac.uk/efo/EFO_0001599
propofolum
2,6-Diisopropylphenol
Diprivan
Disoprofol
CHEBI:44915
James Malone
A phenol that has formula C12H18O.
C12H18O
2,6-bis(1-methylethyl)phenol
propofol
Disoprivan
CC(C)c1cccc(C(C)C)c1O
Rapinovet
2,6-bis(propan-2-yl)phenol
AAT deficiency
alpha-1-Antitrypsin deficiency (disorder)[accessedResource: DOID:13372][accessDate: 04-11-2010]
ALPHA-1-ANTITRYPSIN DEF[accessedResource: ICD9:273.4][accessDate: 04-11-2010]
AAT deficiency[accessedResource: DOID:13372][accessDate: 04-11-2010]
ALPHA-1-ANTITRYPSIN DEF
Alpha-1-antitrypsin deficiency (disorder)
A lung disease that is characterized as a genetic disorder caused by defective production of alpha 1-antitrypsin (A1AT), leading to decreased A1AT activity in the blood and lungs, and deposition of excessive abnormal A1AT protein in liver cells. Alpha-1 antitrypsin works to protect the lungs from a naturally occuring destructive enzyme that is produced by the lungs in response to infections and toxins (such as cigarette smoke). Without enough A1AT, these enzymes slowly destroy the lung tissue causing emphysema. The symptoms include shortness of breath, wheezing, rhonchi, and rales.[accessedResource: DOID:13372][accessDate: 04-11-2010]
alpha-1-antitrypsin deficiency
Tomasz Adamusiak
ICD9:273.4
A lung disease that is characterized as a genetic disorder caused by defective production of alpha 1-antitrypsin (A1AT), leading to decreased A1AT activity in the blood and lungs, and deposition of excessive abnormal A1AT protein in liver cells. Alpha-1 antitrypsin works to protect the lungs from a naturally occuring destructive enzyme that is produced by the lungs in response to infections and toxins (such as cigarette smoke). Without enough A1AT, these enzymes slowly destroy the lung tissue causing emphysema. The symptoms include shortness of breath, wheezing, rhonchi, and rales.
DOID:13372
SNOMEDCT:154771007
James Malone
DOID:3008
Ductal Breast Carcinoma[accessedResource: NCIt:C4017][accessDate: 04-11-2010]
ductal adenocarcinoma
Ductal Carcinoma[accessedResource: NCIt:C4017][accessDate: 04-11-2010]
Duct Adenocarcinoma
Duct Adenocarcinoma[accessedResource: NCIt:C4017][accessDate: 04-11-2010]
Duct Carcinoma[accessedResource: NCIt:C4017][accessDate: 04-11-2010]
A carcinoma arising from the ducts. While ductal carcinomas can arise at other sites, this term is universally used to refer to carcinomas of the breast. Ductal carcinomas account for about two thirds of all breast cancers. Two types of ductal carcinomas have been described: Ductal carcinoma in situ (DCIS) and invasive ductal carcinoma, not otherwise specified. The latter often spreads to the axillary lymph nodes and other anatomic sites. The two forms of ductal carcinoma often coexist.
Duct Carcinoma
A carcinoma arising from the ducts. While ductal carcinomas can arise at other sites, this term is universally used to refer to carcinomas of the breast. Ductal carcinomas account for about two thirds of all breast cancers. Two types of ductal carcinomas have been described: Ductal carcinoma in situ (DCIS) and invasive ductal carcinoma, not otherwise specified. The latter often spreads to the axillary lymph nodes and other anatomic sites. The two forms of ductal carcinoma often coexist.[accessedResource: NCIt:C4017][accessDate: 04-11-2010]
NCIt:C4017
Ductal Carcinoma of Breast
Ductal Carcinoma of the Breast
ductal breast carcinoma
Ductal Carcinoma of the Breast[accessedResource: NCIt:C4017][accessDate: 04-11-2010]
Ductal Carcinoma
Ductal Carcinoma of Breast[accessedResource: NCIt:C4017][accessDate: 04-11-2010]
James Malone
CS57742 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158766&type=germplasm
CS57742
http://www.arabidopsis.org/servlets/TairObject?id=1005158766&type=germplasm
Ele Holloway
James Malone
Natural Language Generator 8th April 2010
A g1e er4 is a GATA-1-null erythroblast.
G1E-ER4
The outer membrane of the two membranes enclosing the embryo in reptiles, birds, and mammals. In placental mammals it contributes to the development of the placenta.[accessedResource: BTO:0000252][accessDate: 04-11-2010]
James Malone
The chorion is one of the membranes that exists during pregnancy between the developing fetus and mother. It is formed by extraembryonic mesoderm and the two layers of trophoblast and surrounds the embryo and other membranes.
The outer membrane of the two membranes enclosing the embryo in reptiles, birds, and mammals. In placental mammals it contributes to the development of the placenta.
chorion
BTO:0000252
Gastritis Associated with Crohn's Disease[accessedResource: NCIt:C27837][accessDate: 04-11-2010]
Crohn's Associated Gastritis[accessedResource: NCIt:C27837][accessDate: 04-11-2010]
Crohn's disease
DOID:4039
Crohn's associated gastritis
NCIt:C27837
Gastritis Associated with Crohn Disease
Gastritis Associated with Crohn Disease[accessedResource: NCIt:C27837][accessDate: 04-11-2010]
James Malone
Gastritis Associated with Crohn's Disease
Tomasz Adamusiak
somatic muscle primordium
FBbt:00005518
PO:0020031
BTO:0001152
James Malone
MAT:0000415
radicle
The lower part of the axis of a plant embryo or seedling.
The lower part of the axis of a plant embryo or seedling.[accessedResource: BTO:0001152][accessDate: 04-11-2010]
James Malone
Ele Holloway
A498
A tumor of meningothelial cells that are manifested in the central nervous system and arise from the arachnoid "cap" cells of the arachnoid villi in the meninges.[accessedResource: DOID:3565][accessDate: 04-11-2010]
meningioma NOS
meningioma, benign, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:3565][accessDate: 04-11-2010]
meningioma, benign, no ICD-O subtype (morphologic abnormality)
meningioma NOS (morphologic abnormality)[accessedResource: DOID:3565][accessDate: 04-11-2010]
meningiomas (morphologic abnormality)[accessedResource: DOID:3565][accessDate: 04-11-2010]
A tumor of meningothelial cells that are manifested in the central nervous system and arise from the arachnoid "cap" cells of the arachnoid villi in the meninges.
meningioma
meningioma NOS[accessedResource: DOID:3565][accessDate: 04-11-2010]
Tomasz Adamusiak
meningioma NOS (morphologic abnormality)
meningiomas (morphologic abnormality)
DOID:3565
Precentral convolution
Prerolandic gyrus
FMA:61894
NCIt:C33393
Prerolandic gyrus[accessedResource: FMA:61894][accessDate: 04-11-2010]
precentral gyrus
James Malone
Precentral convolution[accessedResource: FMA:61894][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
nestin positive islet-derived progenitor cell
PMID: 11246871
corpus allatum primordium
MAT:0000210
corpus allatum primordium[accessedResource: FBbt:00001716][accessDate: 04-11-2010]
FBbt:00001716
A neurosecretory organ forming part of the retrocerebral complex.
A neurosecretory organ forming part of the retrocerebral complex.[accessedResource: FBbt:00005800][accessDate: 04-11-2010]
FBbt:00005800
The primordium that will form the embryonic/larval corpus allatum, a substructure of the embryonic/larval ring gland. It is a paired structure that becomes distinct in early dorsal closure between the head mesoderm and the epidermis of the gnathal segments. During dorsal closure the paired primordia move dorsally to meet and fuse above the cardioblasts of the developing aorta.
corpus allatum
James Malone
BTO:0000291
One of a pair of separate or fused bodies in many insects that are sometimes closely associated with the corpora cardiaca and that secrete hormones (as juvenile hormone).[accessedResource: BTO:0000291][accessDate: 04-11-2010]
corpora allata[accessedResource: BTO:0000291][accessDate: 04-11-2010]
The primordium that will form the embryonic/larval corpus allatum, a substructure of the embryonic/larval ring gland. It is a paired structure that becomes distinct in early dorsal closure between the head mesoderm and the epidermis of the gnathal segments. During dorsal closure the paired primordia move dorsally to meet and fuse above the cardioblasts of the developing aorta.[accessedResource: FBbt:00001716][accessDate: 04-11-2010]
corpora allata
One of a pair of separate or fused bodies in many insects that are sometimes closely associated with the corpora cardiaca and that secrete hormones (as juvenile hormone).
Selen
A chalcogen that has formula Se.
selenium
http://www.ebi.ac.uk/efo/EFO_0001610
InChI=1/Se
InChIKey=BUGBHKTXTAQXES-UHFFFAOYAK
[Se]
selenium atom
James Malone
CHEBI:27568
selenio
34Se
ganglion trigeminale
A ganglion on the sensory root of the fifth cranial nerve, situated in a cleft within the dura mater (trigeminal cave) on the anterior surface of the petrous portion of the temporal bone, and giving off the ophthalmic and maxillary and part of the mandibular nerve; it contains the cells of origin of most of the sensory fibers of the trigeminal nerve.
TAO:0000295
EV:0100491
ganglion of trigeminal nerve
BTO:0001231
A prominent collection of touch-sensory neurons of the trigeminal or fifth cranial nerve, positioned beside the brain between the eye and the ear. Kimmel et al, 1995.[accessedResource: TAO:0000295][accessDate: 04-11-2010]
MA:0001080
gV[accessedResource: TAO:0000295][accessDate: 04-11-2010]
gasserian ganglion[accessedResource: BTO:0001231][accessDate: 04-11-2010]
Gasser's ganglion[accessedResource: BTO:0001231][accessDate: 04-11-2010]
ganglion trigeminale[accessedResource: BTO:0001231][accessDate: 04-11-2010]
A prominent collection of touch-sensory neurons of the trigeminal or fifth cranial nerve, positioned beside the brain between the eye and the ear. Kimmel et al, 1995.
Semilunar ganglion
gasserian ganglion
ganglion of trigeminal nerve[accessedResource: BTO:0001231][accessDate: 04-11-2010]
Gasser's ganglion
Semilunar ganglion[accessedResource: FMAID:52618][accessDate: 04-11-2010]
FMAID:52618
XAO:0000428
A ganglion on the sensory root of the fifth cranial nerve, situated in a cleft within the dura mater (trigeminal cave) on the anterior surface of the petrous portion of the temporal bone, and giving off the ophthalmic and maxillary and part of the mandibular nerve; it contains the cells of origin of most of the sensory fibers of the trigeminal nerve.[accessedResource: BTO:0001231][accessDate: 04-11-2010]
James Malone
MAT:0000511
gV
trigeminal ganglion
James Malone
CS57543 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158567&type=germplasm
CS57543
http://www.arabidopsis.org/servlets/TairObject?id=1005158567&type=germplasm
BTO:0000300
GRO:0005358
cotyledon
GRO:0005358[accessedResource: BTO:0000300][accessDate: 04-11-2010]
A seed leaf; the first leaf formed in a seed.[accessedResource: BTO:0000300][accessDate: 04-11-2010]
James Malone
A seed leaf; the first leaf formed in a seed.
PO:0020030
MAT:0000359
bromocriptine methanesulfonate
(5'alpha)-2-bromo-12'-hydroxy-5'-(2-methylpropyl)-3',6',18-trioxo-2'-(propan-2-yl)ergotaman methanesulfonate (salt)
20197
22260-51-1
C33H44BrN5O8S
bromocriptine mesylate
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#genotyping_design[accessedResource: MO_560][accessDate: 04-11-2010]
Tomasz Adamusiak
genotyping design
MO_560
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#genotyping_design
beta amyloid
40425
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#gene_knock_out[accessedResource: MO_771][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
true
gene knock out
MO_771
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#gene_knock_out
aluminium trichloride
29674
7446-70-0
9674
AlCl3
aluminum trichloride
AlCl3
James Malone
Tomasz Adamusiak
tumour of cranial and spinal nerves
James Malone
blastula dome
ZFS:0000015
CHEBI:50103
James Malone
http://www.ebi.ac.uk/efo/EFO_0001882
An agent that binds to and activates excitatory amino acid receptors.
excitatory amino acid agonist
excitatory amino acid agonists
http://www.ebi.ac.uk/efo/EFO_0001585
oligomycin A
CHEBI:28285
A cell found predominately in the blood.[accessedResource: CL:0000081][accessDate: 04-11-2010]
Tomasz Adamusiak
A cell found predominately in the blood.
blood cell
CL:0000081
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#oligo_synthesizer[accessedResource: MO_930][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0002022
An instrument used to chemically synthesize oligonucleotides.
oligonucleotide synthesizer
MO_930
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#oligo_synthesizer
James Malone
Drosophila C virus
NCI Metathesaurus: C0318594
http://www.ebi.ac.uk/efo/EFO_0001520
sodium (o-((2,6-dichlorophenyl)amino)phenyl)acetate
The sodium salt of diclofenac.
diclofenac sodium
2-((2,6-dichlorophenyl)amino)benzeneacetic acid monosodium salt
[Na+].[O-]C(=O)Cc1ccccc1Nc1c(Cl)cccc1Cl
C14H10Cl2NO2.Na
sodium {2-[(2,6-dichlorophenyl)amino]phenyl}acetate
InChIKey=KPHWPUGNDIVLNH-VDPPZFTLCG
InChI=1/C14H11Cl2NO2.Na/c15-10-5-3-6-11(16)14(10)17-12-7-2-1-4-9(12)8-13(18)19;/h1-7,17H,8H2,(H,18,19);/q;+1/p-1/fC14H10Cl2NO2.Na/q-1;m
sodium (o-(2,6-dichloroanilino)phenyl)acetate
An organic sodium salt that has formula C14H10Cl2NNaO2.
CHEBI:4509
C14H10Cl2NNaO2
(o-(2,6-dichloroanilino)phenyl)acetic acid monosodium salt
(o-(2,6-dichloroanilino)phenyl)acetic acid sodium salt
Cell line derived from squamous cell carcinoma of the hypopharynx.
FaDu
James Malone
Ele Holloway
The choroid plexus is tissue located in the spaces inside the brain called ventricles. The choroid plexus makes the fluid that fills the ventricles and surrounds the brain and spinal cord.[accessedResource: BTO:0000258][accessDate: 04-11-2010]
James Malone
The choroid plexus is a brain structure located in the spaces inside the brain called ventricles. The choroid plexus makes the fluid that fills the ventricles and surrounds the brain and spinal cord.
The choroid plexus is tissue located in the spaces inside the brain called ventricles. The choroid plexus makes the fluid that fills the ventricles and surrounds the brain and spinal cord.
choroid plexus
BTO:0000258
MA:0000232
Trunk ganglion which is located adjacent to the spine on a dorsal root and contains the cell bodies of afferent sensory nerves.[accessedResource: ZFA:0000200][accessDate: 04-11-2010]
James Malone
dorsal root ganglion
EHDAA:2899
TAO:0000200
Spinal ganglion[accessedResource: FMAID:5888][accessDate: 04-11-2010]
dorsal root ganglia
Ganglion spinalis[accessedResource: FMAID:5888][accessDate: 04-11-2010]
ZFA:0000200
WBbt:0005189
spinal ganglion
EVM:2000213
Trunk ganglion which is located adjacent to the spine on a dorsal root and contains the cell bodies of afferent sensory nerves.
DRG[accessedResource: TAO:0000200][accessDate: 04-11-2010]
SAEL:30
NIFSTD:birnlex_2596
MAT:0000162
dorsal root ganglia[accessedResource: TAO:0000200][accessDate: 04-11-2010]
EMAPA:16668
Ganglion spinalis
Tomasz Adamusiak
EMAPA:18372
FMAID:5888
DRG
(4Z,7Z,10Z,13Z,16Z,19Z)-docosa-4,7,10,13,16,19-hexaenoic acid
A docosahexaenoic acid that has formula C22H32O2.
C22H32O2
4,7,10,13,16,19-docosahexaenoic acid
InChI=1/C22H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-22(23)24/h3-4,6-7,9-10,12-13,15-16,18-19H,2,5,8,11,14,17,20-21H2,1H3,(H,23,24)/b4-3-,7-6-,10-9-,13-12-,16-15-,19-18-/f/h23H
(4Z,7Z,10Z,13Z,16Z,19Z)-Docosahexaenoic acid
Docosahexaenoic acid
all-cis-docosa-4,7,10,13,16,19-hexaenoic acid
CHEBI:28125
CC\\C=C/C\\C=C/C\\C=C/C\\C=C/C\\C=C/C\\C=C/CCC(O)=O
InChIKey=MBMBGCFOFBJSGT-YALXRAKKDU
Doconexent
http://www.ebi.ac.uk/efo/EFO_0001480
James Malone
true
2.6.1
Use http://www.ebi.ac.uk/efo/EFO_0000365 colorectal adenocarcinoma
obsolete_colorectal carcinoma
A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of triglycerides.
adipocyte[accessedResource: CL:0000136][accessDate: 04-11-2010]
A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of triglycerides.[accessedResource: CL:0000136][accessDate: 04-11-2010]
fat cell
James Malone
lipocyte
adipose cell[accessedResource: CL:0000136][accessDate: 04-11-2010]
adipocyte
A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of tryglycerides.
adipose cell
CL:0000136
James Malone
129 is a mouse strain as described in Jackson Laboratory http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
129 mouse strain
Simpson E. M., Linder C. C., Sargent E. E., Davisson M. T., Mobraaten L. E., and Sharp J. J. (1997) Genetic variation among 129 substrains and its importance for targeted mutagenesis in mice. Nature Genet. 16, 19-27.
http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
EMAPA:18986
Organ with organ cavity which connects the cervical canal of uterus to the vestibule of vagina. Examples: There is only one vagina.
In most female insects, an ectodermal pouch derived from the posteroventral part of abdominal segment VIII (possibly IX in some insects) and sometimes adjacent parts of the abdominal venter; ending anteriorly at the posterior end of the common oviduct. In mosquitoes and some other insects, the roof of the vagina is formed by the venter of abdominal segment IX; partially divided transversely by the spermathecal eminence and sometimes the upper vaginal sclerites.[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
gemeinsamer Geschlechtsgang
bursa copulatrix[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
atrium
A canal in a female mammal that leads from the uterus to the external orifice of the genital canal.[accessedResource: BTO:0000243][accessDate: 04-11-2010]
In most female insects, an ectodermal pouch derived from the posteroventral part of abdominal segment VIII (possibly IX in some insects) and sometimes adjacent parts of the abdominal venter; ending anteriorly at the posterior end of the common oviduct. In mosquitoes and some other insects, the roof of the vagina is formed by the venter of abdominal segment IX; partially divided transversely by the spermathecal eminence and sometimes the upper vaginal sclerites.
EV:0100117
vaginal atrium[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
caecum
upper atrium
bursa[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
genital atrium
TADS:0000441
genital orifice[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
MA:0000394
genital atrium[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
BTO:0000243
lower atrium
FMAID:19949
bursa
TGMA:0000607
A canal in a female mammal that leads from the uterus to the external orifice of the genital canal.
caecum[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
gemeinsamer Geschlechtsgang[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
bursa copulatrix
genital orifice
atrium[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
genital chamber[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
vaginal atrium
genital chamber
MAT:0000128
upper atrium[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
lower atrium[accessedResource: TGMA:0000607][accessDate: 04-11-2010]
FBbt:00004925
vagina
James Malone
TAO:0000029
ZFA:0000029
Tomasz Adamusiak
EMAPA:16916
The most posterior of the three principal regions of the brain, forming the rhombencephalon and all or most of the metencephalon. Kimmel et al, 1995.
The posterior of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain that includes the cerebellum, the medulla oblongata, and in mammals the pons and that controls autonomic functions and equilibrium.
rhombencephalon[accessedResource: ZFA:0000029][accessDate: 04-11-2010]
MAT:0000107
Organ component of neuraxis that has as its parts the pons, cerebellum and medulla oblongata . Examples: There is only one hindbrain.
rhombencephalon
MA:0000195
James Malone
BTO:0000672
XAO:0000015
EHDAA:3514
The posterior of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain that includes the cerebellum, the medulla oblongata, and in mammals the pons and that controls autonomic functions and equilibrium.[accessedResource: BTO:0000672][accessDate: 04-11-2010]
hindbrain
The most posterior of the three principal regions of the brain, forming the rhombencephalon and all or most of the metencephalon. Kimmel et al, 1995.[accessedResource: TAO:0000029][accessDate: 04-11-2010]
MFO:0002340
FMAID:67687
NIFSTD:birnlex_942
The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished here. From Neuroanatomy of the Zebrafish Brain.
SAEL:50
The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished here. From Neuroanatomy of the Zebrafish Brain.[accessedResource: ZFA:0000029][accessDate: 04-11-2010]
CHEBI:35544
James Malone
http://www.ebi.ac.uk/efo/EFO_0001845
A compound or agent that combines with cyclooxygenases and thereby prevents its substrate-enzyme combination with arachidonic acid and the formation of eicosanoids, prostaglandins, and thromboxanes.
cyclooxygenase inhibitor
COX inhibitor
cyclooxygenase inhibitors
James Malone
pharyngula prim-15
ZFS:0000030
James Malone
Multiple system atrophy (disorder)[accessedResource: DOID:4752][accessDate: 04-11-2010]
A syndrome complex composed of three conditions which represent clinical variants of the same disease process: STRIATONIGRAL DEGENERATION; SHY-DRAGER SYNDROME; and the sporadic form of OLIVOPONTOCEREBELLAR ATROPHIES. Clinical features include autonomic, cerebellar, and basal ganglia dysfunction. Pathologic examination reveals atrophy of the basal ganglia, cerebellum, pons, and medulla, with prominent loss of autonomic neurons in the brain stem and spinal cord (MeSH).[accessedResource: NIFSTD:birnlex_12573][accessDate: 04-11-2010]
DOID:4752
Multisystem Atrophy[accessedResource: NIFSTD:birnlex_12573][accessDate: 04-11-2010]
NIFSTD:birnlex_12573
Ele Holloway
Multisystem Atrophy
multiple system atrophy
Multiple System Atrophy Syndrome
Multisystemic Atrophy[accessedResource: NIFSTD:birnlex_12573][accessDate: 04-11-2010]
Multiple system atrophy (disorder)
Tomasz Adamusiak
Multisystemic Atrophy
A syndrome complex composed of three conditions which represent clinical variants of the same disease process: STRIATONIGRAL DEGENERATION; SHY-DRAGER SYNDROME; and the sporadic form of OLIVOPONTOCEREBELLAR ATROPHIES. Clinical features include autonomic, cerebellar, and basal ganglia dysfunction. Pathologic examination reveals atrophy of the basal ganglia, cerebellum, pons, and medulla, with prominent loss of autonomic neurons in the brain stem and spinal cord (MeSH).
Multiple System Atrophy Syndrome[accessedResource: NIFSTD:birnlex_12573][accessDate: 04-11-2010]
Tomasz Adamusiak
Drosophila component
gastric fundus
Fundus of stomach[accessedResource: FMAID:14559][accessDate: 04-11-2010]
Fundus gastricus (ventricularis)[accessedResource: FMAID:14559][accessDate: 04-11-2010]
Tomasz Adamusiak
Jie Zheng
FMAID:14559
Fundus of stomach
Fundus gastricus (ventricularis)
acetonitrile
20009
75-05-8
9
C2H3N
acetonitrile
Tomasz Adamusiak
anal fin
ZFA:0001162
intravenous anaesthetic
James Malone
i.v.-Anaesthetikum
i.v.-Anaesthetika
intravenous anesthetics
CHEBI:38877
http://www.ebi.ac.uk/efo/EFO_0001872
Ele Holloway
James Malone
BFTC905
Ele Holloway
James Malone
SJSA1
James Malone
Antibiotic AY 22989
Sirolimus
C51H79NO13
http://www.ebi.ac.uk/efo/EFO_0001602
[H][C@]1(CC[C@@H](O)[C@@H](C1)OC)C[C@H](C)[C@]1([H])CC(=O)[C@H](C)\\C=C(C)\\[C@@H](O)[C@@H](OC)C(=O)[C@H](C)C[C@H](C)\\C=C\\C=C\\C=C(C)\\[C@H](C[C@]2([H])CC[C@@H](C)[C@@](O)(O2)C(=O)C(=O)N2CCCC[C@@]2([H])C(=O)O1)OC
Rapamune
A macrolide that has formula C51H79NO13.
CHEBI:9168
(1R,9S,12S,15R,16E,18R,19R,21R,23S,24E,26E,28E,30S,32S,35R)-1,18-dihydroxy-12-{(2S)-1-[(1S,3R,4R)-4-hydroxy-3-methoxycyclohexyl]propan-2-yl}-19,30-dimethoxy-15,17,21,23,29,35-hexamethyl-11,36-dioxa-4-azatricyclo[30.3.1.0(4,9)]hexatriaconta-16,24,26,28-tetraene-2,3,10,14,20-pentone
rapamycin
InChI=1/C51H79NO13/c1-30-16-12-11-13-17-31(2)42(61-8)28-38-21-19-36(7)51(60,65-38)48(57)49(58)52-23-15-14-18-39(52)50(59)64-43(33(4)26-37-20-22-40(53)44(27-37)62-9)29-41(54)32(3)25-35(6)46(56)47(63-10)45(55)34(5)24-30/h11-13,16-17,25,30,32-34,36-40,42-44,46-47,53,56,60H,14-15,18-24,26-29H2,1-10H3/b13-11+,16-12+,31-17+,35-25+/t30-,32-,33+,34-,36-,37+,38+,39+,40-,42+,43+,44-,46-,47+,51-/m1/s1
InChIKey=QFJCIRLUMZQUOT-KLHQEZAJBI
Ele Holloway
James Malone
NCI-H1355
James Malone
CS57601 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158625&type=germplasm
CS57601
http://www.arabidopsis.org/servlets/TairObject?id=1005158625&type=germplasm
James Malone
CS57595 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158619&type=germplasm
CS57595
http://www.arabidopsis.org/servlets/TairObject?id=1005158619&type=germplasm
James Malone
Met5A
benzo(a)pyrene diolepoxide 1
16779
36779
58917-67-2
7,8,8a,9a-tetrahydrobenzo[1,12]tetrapheno[10,11-b]oxirene-7,8-diol
C20H14O3
BDPE
iron(III) citrate
STRUCTURE_Formula:C6H5FeO7
James Malone
Ele Holloway
STRUCTURE_ChemicalName_IUPAC:iron(3+) citrate
DSSTox_Generic_SID:37657
Tomasz Adamusiak
iron citrate
CASRN:3522-50-7
DSSTox_CID:17657
The fluid portion of the blood in which the particulate components are suspended.[accessedResource: BTO:0000131][accessDate: 04-11-2010]
plasma
The fluid portion of the blood in which the particulate components are suspended.
BTO:0000131
James Malone
plasma[accessedResource: BTO:0000131][accessDate: 04-11-2010]
blood plasma
Blood plasma is a yellow liquid component of blood, in which the blood cells in whole blood would normally be suspended.
BTO:0000131
STRUCTURE_Formula:C28H34Cl2F2N2O
DSSTox_CID:22570
Ele Holloway
STRUCTURE_ChemicalName_IUPAC:1-{2-[bis(4-fluorophenyl)methoxy]ethyl}-4-(3-phenylpropyl)piperazine dihydrochloride
James Malone
DSSTox_Generic_SID:42570
GBR 12909 dihydrochloride
Tomasz Adamusiak
CASRN:67469-78-7
James Malone
H720
cortisol
50-23-7
James Malone
GM11831
cinc
http://www.ebi.ac.uk/efo/EFO_0001638
Zink
InChIKey=HCHKCACWOHOZIP-UHFFFAOYAS
InChI=1/Zn
[Zn]
A zinc group element that has formula Zn.
30Zn
A zinc group element atom that has formula Zn.
zincum
zinc atom
Zinc
CHEBI:27363
James Malone
Tomasz Adamusiak
trunk mesenchyme
ZFA:0000081
primordial germ cell
Gonocyte
James Malone
CL:0000670
A primordial germ cell is a diploid germ cell precursors that transiently exist in the embryo before they enter into close association with the somatic cells of the gonad and become irreversibly committed as germ cells.
Primitive germ cell
Gonocyte[accessedResource: CL:0000670][accessDate: 04-11-2010]
A primordial germ cell is a diploid germ cell precursors that transiently exist in the embryo before they enter into close association with the somatic cells of the gonad and become irreversibly committed as germ cells.[accessedResource: CL:0000670][accessDate: 04-11-2010]
Primitive germ cell[accessedResource: CL:0000670][accessDate: 04-11-2010]
troglitazone
A chromane that has formula C24H27NO5S.
(+-)-all-rac-5-(p-((6-Hydroxy-2,5,7,8-tetramethyl-2-chromanyl)methoxy)benzyl)-2,4-thiazolidinedione
C24H27NO5S
5-(4-(6-Hydroxy-2,5,7,8-tetramethylchroman-2-ylmethoxy)benzyl)thiazolidine-2,4-dione
troglitazona
InChI=1/C24H27NO5S/c1-13-14(2)21-18(15(3)20(13)26)9-10-24(4,30-21)12-29-17-7-5-16(6-8-17)11-19-22(27)25-23(28)31-19/h5-8,19,26H,9-12H2,1-4H3,(H,25,27,28)/f/h25H
InChIKey=GXPHKUHSUJUWKP-LNNLXFCOCP
James Malone
Rezulin (TN)
Romglizone
troglitazonum
CHEBI:9753
http://www.ebi.ac.uk/efo/EFO_0001632
5-{4-[(6-hydroxy-2,5,7,8-tetramethyl-3,4-dihydro-2H-chromen-2-yl)methoxy]benzyl}-1,3-thiazolidine-2,4-dione
Cc1c(C)c2OC(C)(CCc2c(C)c1O)COc1ccc(CC2SC(=O)NC2=O)cc1
Segment of cortex of frontal lobe[accessedResource: FMA:242003][accessDate: 04-11-2010]
James Malone
orbitofrontal cortex
FMA:242003
Segment of cortex of frontal lobe
James Malone
A mating type is a biomaterial factor which describes the type of sexual reproduction through isogamy occur in eukaryotes that undergo.
mating type
Tomasz Adamusiak
presumptive rhombomere 4
ZFA:0001212
Ele Holloway
James Malone
NCI-H1993
C25H33N3O3S2
InChI=1/C25H33N3O3S2/c1-16(2)9-7-8-10-17(3)24-28-20(15-33-24)25-27-19(14-32-25)11-12-21(30-5)18(4)22(31-6)13-23(26)29/h7-18,21H,1-6H3,(H2,26,29)/b9-7+,10-8+,12-11+,22-13+/t17?,18-,21+/m1/s1/f/h26H2
http://www.ebi.ac.uk/efo/EFO_0002672
A 2,4'-bi-1,3-thiazole substituted at the 4-position with a (1E,3S,4R,5E)-7-amino-3,5-dimethoxy-4-methyl-7-oxohepta-1,5-dien-1-yl] group and at the 2'-position with a (2S,3E,5E)-7-methylocta-3,5-dien-2-yl group. It is an inhibitor of coenzyme Q - cytochrome c reductase.
InChIKey=XKTFQMCPGMTBMD-WAZGDBOIDY
(2E,4R,5S,6E)-3,5-dimethoxy-4-methyl-7-{2'-[(2S,3E,5E)-7-methylocta-3,5-dien-2-yl]-2,4'-bi-1,3-thiazol-4-yl}hepta-2,6-dienamide
CHEBI:25461
CO[C@@H](\\C=C\\c1csc(n1)-c1csc(n1)C(C)\\C=C\\C=C\\C(C)C)[C@@H](C)C(\\OC)=C/C(N)=O
myxothiazol
James Malone
embryonic cuprophilic cell
FBbt:00005625
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#compound_based_treatment[accessedResource: MO_798][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#compound_based_treatment
Jie Zheng
MO_798
A treatment process in which a chemical compound is administered to the subject under investigation.
Tomasz Adamusiak
James Malone
compound based treatment
BTO:0000907
The smooth muscle coat of the uterus, which forms the main mass of the organ.[accessedResource: BTO:0000907][accessDate: 04-11-2010]
The smooth muscle coat of the uterus, which forms the main mass of the organ.
The smooth muscle lining the uterus.
NCIt:C12314
James Malone
The smooth muscle lining the uterus.[accessedResource: NCIt:C12314][accessDate: 04-11-2010]
myometrium
GeneRIF:12144527
Folic acid deficiency (disorder)
A nutritional condition produced by a deficiency of FOLIC ACID in the diet. Many plant and animal tissues contain folic acid, abundant in green leafy vegetables, yeast, liver, and mushrooms but destroyed by long-term cooking. Alcohol interferes with its intermediate metabolism and absorption. Folic acid deficiency may develop in long-term anticonvulsant therapy or with use of oral contraceptives. This deficiency causes anemia, macrocytic anemia, and megaloblastic anemia. It is indistinguishable from vitamin B 12 deficiency in peripheral blood and bone marrow findings, but the neurologic lesions seen in B 12 deficiency do not occur. (Merck Manual, 16th ed)[accessedResource: MSH:D005494][accessDate: 04-11-2010]
DOID:8453
GeneRIF:12666851
SNOMEDCT:190633005
deficiency of folic acid (disorder)
GeneRIF:15068241
Deficiency of folic acid[accessedResource: SNOMEDCT:190633005][accessDate: 04-11-2010]
A nutritional condition produced by a deficiency of FOLIC ACID in the diet. Many plant and animal tissues contain folic acid, abundant in green leafy vegetables, yeast, liver, and mushrooms but destroyed by long-term cooking. Alcohol interferes with its intermediate metabolism and absorption. Folic acid deficiency may develop in long-term anticonvulsant therapy or with use of oral contraceptives. This deficiency causes anemia, macrocytic anemia, and megaloblastic anemia. It is indistinguishable from vitamin B 12 deficiency in peripheral blood and bone marrow findings, but the neurologic lesions seen in B 12 deficiency do not occur. (Merck Manual, 16th ed)
Folic Acid Deficiencies[accessedResource: MSH:D005494][accessDate: 04-11-2010]
James Malone
GeneRIF:15817609
deficiency of folic acid (disorder)[accessedResource: DOID:8453][accessDate: 04-11-2010]
GeneRIF:16046705
Folic acid deficiency
Folic acid deficiency (disorder)[accessedResource: SNOMEDCT:190633005][accessDate: 04-11-2010]
GeneRIF:12887734
Deficiency of folic acid
folate deficiency
DEFIC FOLIC ACID[accessedResource: MSH:D005494][accessDate: 04-11-2010]
MSH:D005494
Acid Deficiencies, Folic
folic acid deficiency[accessedResource: DOID:8453][accessDate: 04-11-2010]
DEFIC FOLIC ACID
James Malone
true
nanometer
A length unit which is equal to one thousandth of one millionth of a meter or 10^[-9] m.
UO:0000018
nanometre
A nanometer is a length unit which is equal to 1m x 10^-9.
http://www.ebi.ac.uk/efo/EFO_0001723
nm
Gonadal Ridge[accessedResource: NCIt:C34184][accessDate: 04-11-2010]
James Malone
embryonic gonadal ridge
NCIt:C34184
Gonadal Ridge
HCC70
James Malone
leukotriene D4
20533
40533
73836-78-9
C25H40N2O6S
S-[(4S,5R,6E,8E,10Z,13Z)-1-carboxy-4-hydroxynonadeca-6,8,10,13-tetraen-5-yl]cysteinylglycine
LTD4
Ele Holloway
James Malone
NCI-H524
MAT:0000362
The supportive and conductive tissue in plants, consisting of xylem and phloem.
vascular tissue
James Malone
BTO:0001432
PO:0009015
The supportive and conductive tissue in plants, consisting of xylem and phloem.[accessedResource: BTO:0001432][accessDate: 04-11-2010]
Tomasz Adamusiak
ILSXISS98/TejJ
http://jaxmice.jax.org/strain/009321.html
3-methylbenzyl alcohol
(3-methylphenyl)methanol
19497
39497
567-03-1
C8H10O
Tomasz Adamusiak
ILSXISS117/TejJ
Ele Holloway
James Malone
Tomasz Adamusiak
follicle stimulating hormone
CASRN:9002-68-0
DSSTox_Generic_SID:40483
FSH
Tomasz Adamusiak
infraorbital lateral line neuromast
ZFA:0000813
James Malone
Tomasz Adamusiak
DSSTox_Generic_SID:42564
STRUCTURE_Formula:C14H12ClN
Ele Holloway
STRUCTURE_ChemicalName_IUPAC:2-methyl-6-(phenylethynyl)pyridine hydrochloride
DSSTox_CID:22564
MPEP hydrochloride
CASRN:96206-92-7
Ele Holloway
James Malone
PC-1
Ele Holloway
A 22rv1 is a cell line.
A 22rv1 is all of the following: something that is bearer of a prostate carcinoma, something that derives from a homo sapiens, and something that derives from a prostate.
James Malone
22Rv1
Natural Language Generator 8th April 2010
Ele Holloway
STRUCTURE_Formula:C23H23N3O5
DSSTox_CID:22685
James Malone
DSSTox_Generic_SID:42685
Tomasz Adamusiak
STRUCTURE_ChemicalName_IUPAC:(4S)-10-[(dimethylamino)methyl]-4-ethyl-4,9-dihydroxy-1H-pyrano[3',4':6,7]indolizino[1,2-b]quinoline-3,14(4H,12H)-dione
CASRN:123948-87-8
topotecan
James Malone
embryonic foregut sensory structure
FBbt:00005616
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#computer[accessedResource: MO_510][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0002088
A computer is an instrument which manipulates (stores, retrieves, and processes) data according to a list of instructions.
computer
MO_510
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#computer
Posterior segment of right coronary artery[accessedResource: FMAID:3832][accessDate: 04-11-2010]
FMAID:3832
Tomasz Adamusiak
distal portion of right coronary artery
Second segment of right coronary artery[accessedResource: FMAID:3832][accessDate: 04-11-2010]
Jie Zheng
Posterior segment of right coronary artery
Second segment of right coronary artery
Tomasz Adamusiak
mesectoderm anlage
FBbt:00000109
James Malone
HCC1143
CHEBI:50792
James Malone
http://www.ebi.ac.uk/efo/EFO_0001897
An antagonist at the estrogen receptor.
estrogen receptor antagonist
estrogen receptor antagonists
chronic obstructive lung disease (disorder)
GeneRIF:12172904
GeneRIF:16081882
COAD
chronic obstructive airway disease
SNOMEDCT:413846005
Dops[accessedResource: DOID:3083][accessDate: 04-11-2010]
Chronic irreversible airway obstruction[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
Chronic Obstructive Airways Disease
COAD[accessedResource: MSH:D029424][accessDate: 04-11-2010]
CHRONIC OBSTRUCTIVE AIRWAY DIS[accessedResource: MSH:D029424][accessDate: 04-11-2010]
A chronic and progressive lung disorder characterized by the loss of elasticity of the bronchial tree and the air sacs, destruction of the air sacs wall, thickening of the bronchial wall, and mucous accumulation in the bronchial tree. The pathologic changes result in the disruption of the air flow in the bronchial airways. Signs and symptoms include shortness of breath, wheezing, productive cough, and chest tightness. The two main types of chronic obstructive pulmonary disease are chronic obstructive bronchitis and emphysema.[accessedResource: NCIt:C3199][accessDate: 04-11-2010]
chronic obstructive airways disease NOS[accessedResource: DOID:3083][accessDate: 04-11-2010]
Chronic obstructive lung disease, NOS
GeneRIF:16126934
COAD - Chronic obstructive airways disease[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
chronic obstructive pulmonary disease and allied conditions[accessedResource: DOID:3083][accessDate: 04-11-2010]
GeneRIF:15820782
GeneRIF:15038404
CAFL - Chronic airflow limitation[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
chronic obstructive lung disease (disorder)[accessedResource: DOID:3083][accessDate: 04-11-2010]
GeneRIF:11829455
COLD - Chronic obstructive lung disease[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
DOID:3083
GeneRIF:10413721
Chronic airway disease
chronic obstructive airways disease NOS (disorder)
GeneRIF:12884528
GeneRIF:12861851
GeneRIF:15843147
GeneRIF:16236890
Airflow Obstruction, Chronic
chronic obstructive pulmonary disease and allied conditions
GeneRIF:12853070
GeneRIF:15175276
DISEASE (COPD), CHRONIC OBSTRUCTIVE
Chronic Obstructive Lung Disease
Chronic Airflow Obstruction[accessedResource: MSH:D029424][accessDate: 04-11-2010]
GeneRIF:11953106
CHRONIC OBSTRUCTIVE PULM DIS
chronic airway obstruction, not elsewhere classified
Chronic airway disease[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
chronic airway obstruction, NEC in ICD9CM_2006[accessedResource: DOID:3083][accessDate: 04-11-2010]
Chronic Obstructive Airways Disease[accessedResource: NCIt:C3199][accessDate: 04-11-2010]
chronic obstructive pulmonary disease
GeneRIF:14718422
COPD[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
GeneRIF:16166745
Chronic obstructive pulmonary disease finding[accessedResource: SNOMEDCT:413846005][accessDate: 04-11-2010]
A group of disorders affecting the bronchi and the lung parenchyma. It is characterized by chronic and irreversible obstruction of the airflow. It includes chronic bronchitis and pulmonary emphysema.
GeneRIF:12838770
GeneRIF:12816735
GeneRIF:15039137
CAL - Chronic airflow limitation
Chronic obstructive pulmonary disease NOS[accessedResource: SNOMEDCT:196003006][accessDate: 04-11-2010]
CHRONIC OBSTRUCTIVE PULM DIS[accessedResource: MSH:D029424][accessDate: 04-11-2010]
GeneRIF:12838617
Chronic Airflow Obstructions[accessedResource: MSH:D029424][accessDate: 04-11-2010]
Chronic obstructive pulmonary disease finding
CAL - Chronic airflow limitation[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
Chronic airflow limitation[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
chronic airway obstruction, not elsewhere classified[accessedResource: DOID:3083][accessDate: 04-11-2010]
Chronic obstructive lung disease, NOS[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
GeneRIF:16002569
SNOMEDCT:13645005
GeneRIF:15596681
COPD
Chronic airflow limitation
CAFL - Chronic airflow limitation
CAO - Chronic airflow obstruction
Chronic irreversible airway obstruction
COLD
chronic obstructive airways disease NOS (disorder)[accessedResource: DOID:3083][accessDate: 04-11-2010]
GeneRIF:15723202
COAD - Chronic obstructive airways disease
Chronic obstructive lung disease, NEC[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
Chronic airway obstruction[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
GeneRIF:12137602
Dops
GeneRIF:12016104
COLD - Chronic obstructive lung disease
Chronic obstructive pulmonary disease NOS
NCIt:C3199
GeneRIF:15718407
COLD[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
Chronic obstructive lung disease, NEC
GeneRIF:15766560
Chronic obstructive pulmonary disease finding (finding)
GeneRIF:15702235
GeneRIF:14530202
James Malone
GeneRIF:14676438
Chronic airway obstruction
chronic obstructive lung disease [Ambiguous]
GeneRIF:15994391
COPD NOS[accessedResource: DOID:3083][accessDate: 04-11-2010]
Chronic obstructive pulmonary disease finding (finding)[accessedResource: SNOMEDCT:413846005][accessDate: 04-11-2010]
Chronic obstructive airway disease[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
CHRONIC OBSTRUCTIVE LUNG DIS[accessedResource: MSH:D029424][accessDate: 04-11-2010]
A disease of chronic diffuse irreversible airflow obstruction. Subcategories of COPD include CHRONIC BRONCHITIS and PULMONARY EMPHYSEMA.
COPD, CHRONIC OBSTRUCTIVE PULMONARY DISEASE[accessedResource: NCIt:C3199][accessDate: 04-11-2010]
COPD NOS
MSH:D029424
CHRONIC OBSTRUCTIVE AIRWAY DIS
A chronic and progressive lung disorder characterized by the loss of elasticity of the bronchial tree and the air sacs, destruction of the air sacs wall, thickening of the bronchial wall, and mucous accumulation in the bronchial tree. The pathologic changes result in the disruption of the air flow in the bronchial airways. Signs and symptoms include shortness of breath, wheezing, productive cough, and chest tightness. The two main types of chronic obstructive pulmonary disease are chronic obstructive bronchitis and emphysema.
GeneRIF:15795697
DISEASE (COPD), CHRONIC OBSTRUCTIVE[accessedResource: NCIt:C3199][accessDate: 04-11-2010]
GeneRIF:12921631
CAO - Chronic airflow obstruction[accessedResource: SNOMEDCT:13645005][accessDate: 04-11-2010]
chronic obstructive airways disease NOS
GeneRIF:11667971
GeneRIF:11757623
GeneRIF:12761563
A disease of chronic diffuse irreversible airflow obstruction. Subcategories of COPD include CHRONIC BRONCHITIS and PULMONARY EMPHYSEMA.[accessedResource: MSH:D029424][accessDate: 04-11-2010]
GeneRIF:14720432
Airflow Obstructions, Chronic
chronic airway obstruction, NEC in ICD9CM_2006
chronic obstructive lung disease [Ambiguous][accessedResource: DOID:3083][accessDate: 04-11-2010]
CHRONIC OBSTRUCTIVE LUNG DIS
chronic obstructive lung disease[accessedResource: DOID:3083][accessDate: 04-11-2010]
GeneRIF:14985398
CHRONIC OBSTRUCTIVE PULMONARY DISEASE, (COPD)
SNOMEDCT:196003006
Lymphatic vessel[accessedResource: FMAID:30315][accessDate: 04-11-2010]
lymph vessel
FMAID:30315
A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep.[accessedResource: TAO:0005105][accessDate: 04-11-2010]
A vessel that contains or conveys lymph, that originates as an interfibrillar or intercellular cleft or space in a tissue or organ, and that if small has no distinct walls or walls composed only of endothelial cells and if large resembles a vein in structure.[accessedResource: BTO:0000752][accessDate: 04-11-2010]
MAT:0000443
XAO:0000375
Segment of lymphatic tree organ, the wall and lumen of which are continuous with those of the veins, directly or indirectly; together with other lymphatic vessels and lymph nodes, it constitutes the lymphatic tree organ. Examples: bronchomediastinal lymph duct, thoracic duct.
A vessel that contains or conveys lymph, that originates as an interfibrillar or intercellular cleft or space in a tissue or organ, and that if small has no distinct walls or walls composed only of endothelial cells and if large resembles a vein in structure.
lymphatic vessel
MA:0000138
TAO:0005105
BTO:0000752
James Malone
A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep.
A hematopoietic stem cell that resides in the fetal liver. In mice, this cell type is first observed at E10.5. This cell type is MHC-positive, HSA-positive, AA4.1-positive, CD45-positive, Sca-1 positive, CD150-positive, CD48-negative and CD244-negative.[accessedResource: CL:0002353][accessDate: 04-11-2010]
CL:0002353
A hematopoietic stem cell that resides in the fetal liver. In mice, this cell type is first observed at E10.5. This cell type is MHC-positive, HSA-positive, AA4.1-positive, CD45-positive, Sca-1 positive, CD150-positive, CD48-negative and CD244-negative.
similar to CL:0000837, but in fetal liver
Jie Zheng
Tomasz Adamusiak
fetal liver hematopoietic progenitor cell
Ele Holloway
James Malone
Kasumi2
Ele Holloway
James Malone
ductus arteriosus
FMA:79871
HP:0001643
ductus Botalli
square meter
m^[2]
An area unit which is equal to an area enclosed by a square with sides each 1 meter long.
A square meter is an area unit which is equal to an area enclosed by a square with sides each 1 meter long.
true
UO:0000080
http://www.ebi.ac.uk/efo/EFO_0001694
James Malone
square metre
acetone
67-64-1
The uppermost ganglion on the sympathetic trunk, lying behind the internal carotid artery and in front of the second and third cervical vertebrae; it gives rise to postganglionic fibers to the heart via cervical cardiac nerves, to the pharyngeal plexus and thence to the larynx and pharynx, and to the head via the external and internal carotid plexuses.[accessedResource: BTO:0001325][accessDate: 04-11-2010]
ganglion cervicale superius[accessedResource: BTO:0001325][accessDate: 04-11-2010]
James Malone
The uppermost ganglion on the sympathetic trunk, lying behind the internal carotid artery and in front of the second and third cervical vertebrae; it gives rise to postganglionic fibers to the heart via cervical cardiac nerves, to the pharyngeal plexus and thence to the larynx and pharynx, and to the head via the external and internal carotid plexuses.
superior cervical ganglion
BTO:0001325
ganglion cervicale superius
Anna Farne
An assay in which the transcriptome of a biological sample is analysed by Massively Parallel Signature Sequencing (MPSS)
transcription profiling by MPSS
James Malone
gastrula 75%-epiboly
ZFS:0000020
Tomasz Adamusiak
vagal placode 1
ZFA:0001297
Ele Holloway
James Malone
mIMCD-3
MCC:0000500
mIMCD3
James Malone
An assay in which surface-bound, translationally competent ribosome complexes are used to generate a translation profile for mRNA, which mRNA may be a single molecular species, or a combination of species, including complex mixtures such as those found in the set of mRNAs isolated from a cell or tissue. One or more components of the surface-bound ribosome complex may be labeled at specific positions to permit analysis of multiple or single molecules for determination of ribosomal conformational changes and translation kinetics. Translation profiles are used as the basis for comparison of an mRNA or set of mRNA species. The translation profile can be used to determine such characteristics as kinetics of initiation, kinetic of elongation, identity of the polypeptide product, and the like. Analysis of translation profiles may be used to determine differential gene expression, optimization of mRNA sequences for expression, screening drug candidates for an effect on translation.
translation profiling
United States Patent 20040023256
Carcinoma in situ of stomach[accessedResource: ICD9:230.2][accessDate: 04-11-2010]
gastric cancer
gastric carcinoma
CA IN SITU STOMACH
CA IN SITU STOMACH[accessedResource: ICD9:230.2][accessDate: 04-11-2010]
carcinoma in situ of stomach (disorder)[accessedResource: DOID:9138][accessDate: 04-11-2010]
carcinoma in situ of stomach (disorder)
James Malone
carcinoma in situ of stomach NOS (disorder)[accessedResource: DOID:9138][accessDate: 04-11-2010]
gastric carcinoma in situ[accessedResource: DOID:9138][accessDate: 04-11-2010]
ICD9:230.2
gastric carcinoma in situ
DOID:9138
Carcinoma in situ of stomach
carcinoma in situ of stomach NOS (disorder)
DSSTox_Generic_SID:C10H12O2
DSSTox_CID:37631
Tomasz Adamusiak
4-phenylbutyric acid
STRUCTURE_Formula:4-phenylbutanoic acid
CASRN:1821-12-1
James Malone
Ele Holloway
PBA
James Malone
Jie Zheng
Tomasz Adamusiak
haploid, diploid, triploid
The number of single sets of chromosomes in the cell or an organism e.g., haploid, diploid, triploid, etc.
ploidy
MO_220
Tomasz Adamusiak
presumptive cephalic mesoderm
ZFA:0000414
1-aminocyclopropane-1-carboxylic acid
1-aminocyclopropanecarboxylic acid
22059-21-8
39577
C4H7NO2
pelvic colon[accessedResource: BTO:0000645][accessDate: 04-11-2010]
FMAID:14548
sigmoid colon
BTO:0000645
colon sigmoideum
sigmoid flexure[accessedResource: BTO:0000645][accessDate: 04-11-2010]
The S-shaped part of the colon which lies in the pelvis, extending from the pelvic brim to the third segment of the sacrum, and continuous above with the descending (or iliac) colon and below with the rectum.
colon sigmoideum[accessedResource: BTO:0000645][accessDate: 04-11-2010]
sigmoid flexure
The S-shaped part of the colon which lies in the pelvis, extending from the pelvic brim to the third segment of the sacrum, and continuous above with the descending (or iliac) colon and below with the rectum.[accessedResource: BTO:0000645][accessDate: 04-11-2010]
MAT:0000314
pelvic colon
James Malone
Tomasz Adamusiak
branchial muscle
ZFA:0000172
James Malone
GM12763
James Malone
HEK293T
InChI=1/C24H26N6O3/c1-4-7-19-25-21(24(2,3)33)20(23(31)32)30(19)14-15-10-12-16(13-11-15)17-8-5-6-9-18(17)22-26-28-29-27-22/h5-6,8-13,33H,4,7,14H2,1-3H3,(H,31,32)(H,26,27,28,29)/f/h26,31H
http://www.ebi.ac.uk/efo/EFO_0001587
InChIKey=VTRAEEWXHOVJFV-NEQLIHFBCB
4-(hydroxy-1-methylethyl)-2-propyl-1-{[2'-(1H-tetrazol-5-yl)-1,1'-biphenyl-4-yl]methyl}-1H-imidazole-5-carboxylic acid
4-(1-hydroxy-1-methylethyl)-2-propyl-1-{[2'-(1H-tetrazol-5-yl)[1,1'-biphenyl]-4-yl]methyl}-1H-imidazole-5-carboxylic acid
olmesartan
A biphenylyltetrazole that has formula C24H26N6O3.
CCCc1nc(c(C(O)=O)n1Cc1ccc(cc1)-c1ccccc1-c1nnn[nH]1)C(C)(C)O
4-(1-hydroxy-1-methylethyl)-2-propyl-1-{[2'-(1H-tetrazol-5-yl)biphenyl-4-yl]methyl}-1H-imidazole-5-carboxylic acid
C24H26N6O3
CHEBI:48416
Tomasz Adamusiak
ventral midline glia
FBbt:00005567
3-nitropropionic acid
20982
3-nitropropanoic acid
504-88-1
982
C3H5NO4
3-NPA
Ele Holloway
James Malone
NCI-H720
James Malone
GM12249
Tomasz Adamusiak
ovarian follicle stage IV
ZFA:0001264
Tomasz Adamusiak
presumptive brain
ZFA:0000146
Ele Holloway
James Malone
SNU182
Han Chinese
Tomasz Adamusiak
Han Chinese
http://en.wikipedia.org/wiki/Han_Chinese
James Malone
CS57859 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158883&type=germplasm
CS57859
http://www.arabidopsis.org/servlets/TairObject?id=1005158883&type=germplasm
Ele Holloway
James Malone
NT-1
(5R,6S,9R,13S,14R)-4,5-epoxy-N-methyl-7-morphinen-3,6-diol
(7R,7AS,12BS)-3-METHYL-2,3,4,4A,7,7A-HEXAHYDRO-1H-4,12-METHANO[1]BENZOFURO[3,2-E]ISOQUINOLINE-7,9-DIOL
(5alpha,6alpha)-17-methyl-7,8-didehydro-4,5-epoxymorphinan-3,6-diol
James Malone
A morphinane alkaloid that has formula C17H19NO3.
morphine
InChI=1/C17H19NO3/c1-18-7-6-17-10-3-5-13(20)16(17)21-15-12(19)4-2-9(14(15)17)8-11(10)18/h2-5,10-11,13,16,19-20H,6-8H2,1H3/t10-,11+,13-,16-,17-/m0/s1
CHEBI:17303
http://www.ebi.ac.uk/efo/EFO_0002414
Morphia
C17H19NO3
[H][C@]12C=C[C@H](O)[C@@H]3Oc4c(O)ccc5C[C@H]1N(C)CC[C@@]23c45
A highly potent opiate analgesic psychoactive drug, morphine acts directly on the central nervous system (CNS) to relieve pain. Morphine has a high potential for addiction; tolerance and both physical and psychological dependence develop rapidly.
Morphin
17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol
morfina
morphium
(5alpha,6alpha)-didehydro-4,5-epoxy-17-methylmorphinan-3,6-diol
InChIKey=BQJCRHHNABKAKU-KBQPJGBKBH
Ele Holloway
morphinum
Tomasz Adamusiak
interferon beta
Female pudendum[accessedResource: FMAID:20462][accessDate: 04-11-2010]
FMAID:20462
BTO:0001055
EV:0100118
vulva
Puboperineal region
Female pudendum
MAT:0000169
The external female genital organs, including the clitoris, vaginal lips, and the opening to the vagina.[accessedResource: BTO:0001055][accessDate: 04-11-2010]
The external female genital organs, including the clitoris, vaginal lips, and the opening to the vagina.
WBbt:0006748
Puboperineal region[accessedResource: FMAID:20462][accessDate: 04-11-2010]
James Malone
MA:0000395
FBbt:00004926
true
MO_754
A volume unit which is equal to one thousandth of one millionth of a liter or 10^[-9] L.
A nanoliter is a volume unit which is equal to one thousandth of one millionth of a liter or 10^-9 L.
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#nl
nl
Tomasz Adamusiak
James Malone
nanoliter
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#nl[accessedResource: MO_754][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0001704
Tomasz Adamusiak
presumptive spinal cord
ZFA:0000417
cartilage cell[accessedResource: CL:0000138][accessDate: 04-11-2010]
Polymorphic cell that form cartilage.
cartilage cell
chondrocyte
James Malone
CL:0000138
Polymorphic cell that form cartilage.[accessedResource: CL:0000138][accessDate: 04-11-2010]
Ele Holloway
James Malone
ITM-ST
CHEBI:35457
James Malone
http://www.ebi.ac.uk/efo/EFO_0001836
angiotensin-converting enzyme inhibito
ACE inhibitor
angiotensin-converting enzyme inhibitor
James Malone
Tomasz Adamusiak
osteoma
Tomasz Adamusiak
ring gland
FBbt:00001722
Denotes the inhabitants of Iran, a person from there, or their descendants elsewhere.[accessedResource: NCIt:C43869][accessDate: 04-11-2010]
Tomasz Adamusiak
Denotes the inhabitants of Iran, a person from there, or their descendants elsewhere.
Iranian
NCIt:C43869
thyrocyte
Tomasz Adamusiak
BTO:0003736
An epithelial cell lining the thyroid follicle.
thyroid epithelial cell
thyroid follicular cell[accessedResource: BTO:0003736][accessDate: 04-11-2010]
thyroid follicular cell
An epithelial cell lining the thyroid follicle.[accessedResource: BTO:0003736][accessDate: 04-11-2010]
thyroid epithelial cell[accessedResource: BTO:0003736][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hermaphrodite[accessedResource: MO_356][accessDate: 04-11-2010]
A biological sex quality inhering in an organism or a population with both male and female sexual organs in one individual.[accessedResource: PATO:0001340][accessDate: 04-11-2010]
intersex
hermaphrodite
intersex[accessedResource: PATO:0001340][accessDate: 04-11-2010]
Hermaphroditism
An organism having both male and female sexual characteristics and organs.
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hermaphrodite
Hermaphroditism[accessedResource: NCIt:C45909][accessDate: 04-11-2010]
Jie Zheng
An organism having both male and female sexual characteristics and organs.[accessedResource: NCIt:C45909][accessDate: 04-11-2010]
MO_356
NCIt:C45909
PATO:0001340
A biological sex quality inhering in an organism or a population with both male and female sexual organs in one individual.
Tomasz Adamusiak
GeneRIF:15766558
GeneRIF:15452265
Severe acute respiratory syndrome (disorder)[accessedResource: SNOMEDCT:398447004][accessDate: 04-11-2010]
GeneRIF:15381116
GeneRIF:15345712
GeneRIF:16195357
A viral disorder characterized by high FEVER, dry COUGH, shortness of breath (DYSPNEA) or breathing difficulties, and atypical PNEUMONIA. A virus in the genus CORONAVIRUS is the suspected agent.[accessedResource: MSH:D045169][accessDate: 04-11-2010]
GeneRIF:15243926
SARS-CoV infection[accessedResource: DOID:2945][accessDate: 04-11-2010]
GeneRIF:16299304
A viral disorder characterized by high FEVER, dry COUGH, shortness of breath (DYSPNEA) or breathing difficulties, and atypical PNEUMONIA. A virus in the genus CORONAVIRUS is the suspected agent.
GeneRIF:15522242
GeneRIF:15731040
GeneRIF:14647384
GeneRIF:15518555
GeneRIF:15840526
GeneRIF:15992957
GeneRIF:15326590
GeneRIF:15569689
A respiratory system infectious disease that is a severe respiratory illness characterized by fever, headache, body aches, a dry cough, and hypoxia and pneumonia caused by a single-stranded RNA virus of the genus SARS coronavirus (SARS-CoV).
GeneRIF:15788388
GeneRIF:15306699
GeneRIF:15958670
SARS-associated coronavirus[accessedResource: DOID:2945][accessDate: 04-11-2010]
SARS ASSOC CORONAVIRUS
GeneRIF:12969506
SARS-associated coronavirus
SARS-CoV infection
GeneRIF:15749762
Severe acute respiratory syndrome is a respiratory tract infection described as a severe respiratory illness that is transmitted especially by contact with infectious material (as respiratory droplets or body fluids), is caused by a single-stranded RNA virus of the genus Coronavirus (SARS-CoV), is characterized by fever, headache, body aches, a dry cough, and hypoxia and usually by pneumonia.
James Malone
SARS[accessedResource: SNOMEDCT:398447004][accessDate: 04-11-2010]
MSH:D045169
SARS
A respiratory system infectious disease that is a severe respiratory illness characterized by fever, headache, body aches, a dry cough, and hypoxia and pneumonia caused by a single-stranded RNA virus of the genus SARS coronavirus (SARS-CoV).[accessedResource: DOID:2945][accessDate: 04-11-2010]
SARS ASSOC CORONAVIRUS[accessedResource: ICD9:079.82][accessDate: 04-11-2010]
GeneRIF:15187168
DOID:2945
Severe acute respiratory syndrome (disorder)
SNOMEDCT:398447004
severe acute respiratory syndrome
ICD9:079.82
cinnamaldehyde
104-55-2
James Malone
NCI-H2882
H2882
James Malone
CS57556 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158580&type=germplasm
CS57556
http://www.arabidopsis.org/servlets/TairObject?id=1005158580&type=germplasm
GeneRIF:15253135
GeneRIF:11499325
GeneRIF:15064832
Oligozoospermia
Low Sperm Counts
A condition of suboptimal concentration of SPERMATOZOA in the ejaculated SEMEN to ensure successful FERTILIZATION of an OVUM. In humans, oligospermia is defined as a sperm count below 20 million per milliliter semen.
GeneRIF:11869379
MSH:D009845
GeneRIF:16275267
Azoospermia (finding)[accessedResource: DOID:14227][accessDate: 04-11-2010]
Low Sperm Count[accessedResource: MSH:D009845][accessDate: 04-11-2010]
GeneRIF:12399527
GeneRIF:12366783
Azoospermia (finding)
James Malone
Oligozoospermia[accessedResource: MSH:D009845][accessDate: 04-11-2010]
GeneRIF:16213863
GeneRIF:16123080
GeneRIF:12634316
Count, Low Sperm
azoospermia
GeneRIF:15379971
Sperm Counts, Low[accessedResource: MSH:D009845][accessDate: 04-11-2010]
Oligospermia
A condition of suboptimal concentration of SPERMATOZOA in the ejaculated SEMEN to ensure successful FERTILIZATION of an OVUM. In humans, oligospermia is defined as a sperm count below 20 million per milliliter semen.[accessedResource: MSH:D009845][accessDate: 04-11-2010]
Oligospermia[accessedResource: MSH:D009845][accessDate: 04-11-2010]
GeneRIF:12161499
GeneRIF:15220464
DOID:14227
GeneRIF:15044259
GeneRIF:12399529
ICD9:606.0
James Malone
acute quadriplegic myopathy
NCI Metathesaurus: C1406910
James Malone
juvenile days 45-89
ZFS:0000043
EHDAA:3470
MFO:0002260
MA:0000170
EMAPA:16895
SAEL:43
NIFSTD:birnlex_1509
prosencephalon
XAO:0000011
MAT:0000105
Organ component of neuraxis that has as its parts the telencephalon, diencephalon, lateral ventricles and third ventricle. Examples: There is only one forebrain.
prosencephalon[accessedResource: MAT:0000105][accessDate: 04-11-2010]
The anterior of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain that includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and that especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions.
BTO:0000478
FMAID:61992
TAO:0000109
ZFA:0000109
The most anterior region the brain including both the telencephalon and diencephalon. Kimmel et al, 1995.[accessedResource: TAO:0000109][accessDate: 04-11-2010]
James Malone
Tomasz Adamusiak
The most anterior region the brain including both the telencephalon and diencephalon.
forebrain
The anterior of the three primary divisions of the developing vertebrate brain or the corresponding part of the adult brain that includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and that especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions.[accessedResource: BTO:0000478][accessDate: 04-11-2010]
The most anterior region the brain including both the telencephalon and diencephalon.[accessedResource: ZFA:0000109][accessDate: 04-11-2010]
The most anterior region the brain including both the telencephalon and diencephalon. Kimmel et al, 1995.
James Malone
GM12239
James Malone
CS57596 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158620&type=germplasm
CS57596
http://www.arabidopsis.org/servlets/TairObject?id=1005158620&type=germplasm
Ele Holloway
James Malone
Tomasz Adamusiak
thrombopoietin
CASRN:9014-42-0
DSSTox_CID:
DSSTox_Generic_SID:40918
Use PATO qualities , e.g. dead
true
The stage premortem or postmortem at which the sample was processed for extraction of biomaterials. e.g. alive or dead
obsolete_organism status
James Malone
CS57908 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158932&type=germplasm
CS57908
http://www.arabidopsis.org/servlets/TairObject?id=1005158932&type=germplasm
1A2
Ele Holloway
James Malone
Hispanic[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Latino Population[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Spanish Origin
A person of Mexican, Puerto Rican, Cuban, Central or South American or other Spanish culture or origin, regardless of race. An arbitrary ethnic classification.
Hispanic or Latino[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Hispanic Populations[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Hispanic
Hispanic or Latino
Latino
A person of Mexican, Puerto Rican, Cuban, Central or South American or other Spanish culture or origin, regardless of race. An arbitrary ethnic classification.[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Hispanics or Latinos
Tomasz Adamusiak
Spanish Origin[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Hispanics or Latinos[accessedResource: NCIt:C17459][accessDate: 04-11-2010]
Hispanic Populations
NCIt:C17459
Latino Population
Tomasz Adamusiak
ILSXISS52/TejJ
http://jaxmice.jax.org/strain/009273.html
Tomasz Adamusiak
ILSXISS90/TejJ
http://jaxmice.jax.org/strain/009282.html
Colitis, Mucous
Spastic colitis[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Functional bowel disease[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Psychogenic IBS[accessedResource: DOID:9778][accessDate: 04-11-2010]
Irritable colon - Irritable bowel syndrome
Irritable bowel - IBS
Mucous Colitides[accessedResource: MSH:D043183][accessDate: 04-11-2010]
Membranous colitis[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
A disorder with chronic or recurrent colonic symptoms without a clearcut etiology. This condition is characterized by chronic or recurrent ABDOMINAL PAIN, bloating, MUCUS in FECES, and an erratic disturbance of DEFECATION.[accessedResource: MSH:D043183][accessDate: 04-11-2010]
Nervous colitis[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Irritable colon syndrome[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Psychogenic IBS
Irritable bowel[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Irritable Colon[accessedResource: MSH:D043183][accessDate: 04-11-2010]
GeneRIF:15188158
IBD[accessedResource: DOID:9778][accessDate: 04-11-2010]
Irritable Colon
Spastic colitis
Irritable colon - Irritable bowel syndrome[accessedResource: DOID:9778][accessDate: 04-11-2010]
irritable bowel syndrome
Membranous colitis
Spastic colon[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Colon spasm[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
[X]Psychogenic IBS
IC - Irritable colon[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
DOID:9778
James Malone
Functional bowel disease
Irritable Bowel Syndromes[accessedResource: MSH:D043183][accessDate: 04-11-2010]
IBS - Irritable bowel syndrome
A disorder with chronic or recurrent colonic symptoms without a clearcut etiology. This condition is characterized by chronic or recurrent ABDOMINAL PAIN, bloating, MUCUS in FECES, and an erratic disturbance of DEFECATION.
Irritable bowel
GeneRIF:15509739
IBS[accessedResource: DOID:9778][accessDate: 04-11-2010]
Syndromes, Irritable Bowel
GeneRIF:11877320
GeneRIF:15232358
Irritable colon syndrome
Irritable colon (disorder)
Colitides, Mucous
[X]Psychogenic IBS[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
MSH:D043183
Irritable colon (disorder)[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
IBD
Nervous colitis
IC - Irritable colon
Spastic colon
ICD9:564.1
Irritable bowel - IBS[accessedResource: DOID:9778][accessDate: 04-11-2010]
IBS
SNOMEDCT:10743008
Colitis, Mucous[accessedResource: MSH:D043183][accessDate: 04-11-2010]
Adaptive colitis[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
IBS - Irritable bowel syndrome[accessedResource: SNOMEDCT:10743008][accessDate: 04-11-2010]
Adaptive colitis
GeneRIF:15633223
Colon spasm
Tomasz Adamusiak
hyosymplectic cartilage
ZFA:0001422
noninvasive prostate duct lesions that affect smaller caliber ducts
PIN - Prostatic Intraepithelial Neoplasia
A neoplastic proliferation of the epithelial cells that line the acini and the ducts of the prostate gland. The neoplastic epithelial cells are confined within the acini and the ducts and they do not invade the surrounding prostatic stroma. Morphologically, it is classified as low or high grade.
Prostatic Intraepithelial Neoplasia[accessedResource: NCIt:C4064][accessDate: 04-11-2010]
noninvasive prostate duct lesions that affect smaller caliber ducts[accessedResource: MP:0009219][accessDate: 04-11-2010]
MP:0009219
PIN - Prostatic Intraepithelial Neoplasia[accessedResource: NCIt:C4064][accessDate: 04-11-2010]
prostatic intraepithelial neoplasia
NCIt:C4064
prostate intraepithelial neoplasia
Ele Holloway
A neoplastic proliferation of the epithelial cells that line the acini and the ducts of the prostate gland. The neoplastic epithelial cells are confined within the acini and the ducts and they do not invade the surrounding prostatic stroma. Morphologically, it is classified as low or high grade.[accessedResource: NCIt:C4064][accessDate: 04-11-2010]
Tomasz Adamusiak
PIN[accessedResource: NCIt:C4064][accessDate: 04-11-2010]
PIN
James Malone
GM11882
GRO:0005359[accessedResource: BTO:0001227][accessDate: 04-11-2010]
BTO:0001227
James Malone
GRO:0005359
PO:0009088
The outer layer of a seed that is developed from the integuments of the ovule; the testa.
tegmen[accessedResource: BTO:0001227][accessDate: 04-11-2010]
testa[accessedResource: BTO:0001227][accessDate: 04-11-2010]
tegmen
testa
The outer layer of a seed that is developed from the integuments of the ovule; the testa.[accessedResource: BTO:0001227][accessDate: 04-11-2010]
MAT:0000228
seed coat
James Malone
Aeromonas hydrophila infection is a bacterial disease caused by infection from the Aeromonas hydrophila bacteria.
Aeromonas hydrophila infection
NCI Metathesaurus: C0085491
true
microgram per milliliter
ug/ml
http://www.ebi.ac.uk/efo/EFO_0001583
novobiocin
CHEBI:28368
James Malone
http://www.ebi.ac.uk/efo/EFO_0002633
Viridiplantae are a clade comprising the green algae and land plants.
Viridiplantae
green plants
James Malone
http://www.ebi.ac.uk/efo/EFO_0001677
true
A base unit is a unit which is used to measure a paticular type which is independent from all other base units and from which all measures of that type can be derived, for example, a length base unit of the meter. This is akin to the SI base unit system.
A unit which is one of a particular measure to which all measures of that type can be related.
base unit
UO:0000045
An adenocarcinoma arising from the stomach glandular epithelium. Gastric adenocarcinoma is primarily a disease of older individuals, most commonly develops after a long period of atrophic gastritis and is strongly associated with Helicobacter Pylori infection. The lack of early symptoms often delays the diagnosis of gastric cancer. The majority of patients present with advanced tumors which have poor rates of curability. Microscopically, two important histologic types of gastric adenocarcinoma are recognized: the intestinal and diffuse type. The overall prognosis of gastric adenocarcinomas is poor, even in patients who receive a "curative" resection (adapted from Sternberg's Surgical Pathology, 3rd ed., 1999).
Adenocarcinoma of the Stomach
NCIt:C4004
Adenocarcinoma of Stomach
Stomach Adenocarcinoma
curative
Adenocarcinoma of stomach (disorder)[accessedResource: SNOMEDCT:408647009][accessDate: 04-11-2010]
Stomach Adenocarcinoma[accessedResource: NCIt:C4004][accessDate: 04-11-2010]
adenocarcinoma of stomach (disorder)
An adenocarcinoma arising from the stomach glandular epithelium. Gastric adenocarcinoma is primarily a disease of older individuals, most commonly develops after a long period of atrophic gastritis and is strongly associated with Helicobacter Pylori infection. The lack of early symptoms often delays the diagnosis of gastric cancer. The majority of patients present with advanced tumors which have poor rates of curability. Microscopically, two important histologic types of gastric adenocarcinoma are recognized: the intestinal and diffuse type. The overall prognosis of gastric adenocarcinomas is poor, even in patients who receive a "curative" resection (adapted from Sternberg's Surgical Pathology, 3rd ed., 1999).[accessedResource: NCIt:C4004][accessDate: 04-11-2010]
Adenocarcinoma of the Stomach[accessedResource: NCIt:C4004][accessDate: 04-11-2010]
DOID:3717
Adenocarcinoma of Stomach[accessedResource: NCIt:C4004][accessDate: 04-11-2010]
gastric adenocarcinoma
James Malone
SNOMEDCT:408647009
James Malone
http://www.ebi.ac.uk/efo/EFO_0002635
Brassica oleracea, commonly called Wild Mustard, is a species of Brassica native to coastal southern and western Europe, where its tolerance of salt and lime and its intolerance of competition from other plants typically restrict its natural occurrence to limestone sea cliffs, like the chalk cliffs on both sides of the English Channel.
Brassica oleracea
http://en.wikipedia.org/wiki/Brassica_oleracea
James Malone
GM12056
HMT3522S1
James Malone
Asn/A antEndo[accessedResource: FBbt:00000210][accessDate: 04-11-2010]
James Malone
anterior endoderm anlage
FBbt:00000210
Asn/A antEndo
James Malone
HCC515
James Malone
NCI-H1334
H1334
Jie Zheng
Tomasz Adamusiak
abnormal glucose tolerance
HP:0001952
James Malone
medial meniscus
Medial is a geometric modifier describing something which is pertaining to, in or toward the middle, for example medial meniscus.
medial
MAT:0000490
Tomasz Adamusiak
spinal cord interneuron
ZFA:0000778
James Malone
SKGT4
Ele Holloway
James Malone
SUDHL16
NTera2
A human embryonal carcinoma (EC) stem cell line used as a model system for the study of neuronal differentiation
Ele Holloway
James Malone
YCC10
James Malone
time before disease progression
James Malone
LK-2
James Malone
CS57803 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158827&type=germplasm
CS57803
http://www.arabidopsis.org/servlets/TairObject?id=1005158827&type=germplasm
abamectin
(2aE,4E,8E)-(5'S,6S,6'R,7S,11R,13S,15S,17aR,20R,20aR,20bS)-6'-((S)-sec-Butyl)-5',6,6',7,10,11,14,15,17a,20,20a,20b-dodecahydro-20,20b-dihydroxy-5',6,8,19-tetramethyl-17-oxospiro(11,15-methano-2H,13H,17H-furo(4,3,2-pq)(2,6)benzodioxacyclooctadecin-13,2'-(2H)pyran)-7-yl 2,6-dideoxy-4-O-(2,6-dideoxy-3-O-methyl-alpha-L-arabino-hexopyranosyl)-3-O-methyl-alpha-L-arabino-hexopyranoside
23892
3892
71751-41-2
C48H72O14
developmental stage
MO_878
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#developmental_stage[accessedResource: MO_878][accessDate: 04-11-2010]
James Malone
Jie Zheng
true
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#developmental_stage
A developmental stage is an information entity about some identifiable period in an organism's life cycle e.g. puberty
puberty
James Malone
TERV-ST
James Malone
embryonic foregut
FBbt:00005606
time unit
TimeUnitOther[accessedResource: MO_103][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0001680
Tomasz Adamusiak
A base unit which is a standard measure of the dimension in which events occur in sequence.
MO_103
MO_166
Jie Zheng
TimeUnitOther
true
James Malone
A time unit is a base unit which is a standard measure of the dimension in which events occur in sequence.
James Malone
true
1.8
duplicate of EFO_0001206
obsolete_MDAMB-157
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#submitter[accessedResource: MO_882][accessDate: 04-11-2010]
Tomasz Adamusiak
submitter
MO_882
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#submitter
Parietal lobe is the one of five lobes of the cerebral hemisphere which occupies the dorsal-posterior portion of the hemisphere. It is bounded by the central sulcus on its anterior border and and by the longitudinal cerebral fissure on its medial border. Posteriorly it shares an arbitrary border with the occipital lobe.
Parietal region
FMAID:61826
The upper central lobe of the cerebral hemisphere, separated from the temporal lobe below by the lateral sulcus, but continuous at the posterior end of that sulcus, and separated from the frontal lobe by the central sulcus. Behind, it is continuous with the occipital lobe on the lateral surface, but separated from it by the parietooccipital sulcus on the medial surface.
EV:0100166
MAT:0000506
BTO:0001001
parietal cortex[accessedResource: BTO:0001001][accessDate: 04-11-2010]
The upper central lobe of the cerebral hemisphere, separated from the temporal lobe below by the lateral sulcus, but continuous at the posterior end of that sulcus, and separated from the frontal lobe by the central sulcus. Behind, it is continuous with the occipital lobe on the lateral surface, but separated from it by the parietooccipital sulcus on the medial surface.[accessedResource: BTO:0001001][accessDate: 04-11-2010]
parietal cortex
parietal lobe
James Malone
CHEBI:23530
James Malone
http://www.ebi.ac.uk/efo/EFO_0001821
cytokinins
Tomasz Adamusiak
slow muscle cell somite 7
ZFA:0000973
Ele Holloway
James Malone
T24
Tomasz Adamusiak
ILSXISS99/TejJ
http://jaxmice.jax.org/strain/009286.html
EV:0100127
A cord arising from the navel that connects the fetus with the placenta; also: yolk stalk
connecting stalk[accessedResource: MAT:0000280][accessDate: 04-11-2010]
MAT:0000280
James Malone
EVM:2000364
EHDAA:158
FMAID:85541
SAEL:113
BTO:0001415
connecting stalk
A cord arising from the navel that connects the fetus with the placenta; also: yolk stalk[accessedResource: BTO:0001415][accessDate: 04-11-2010]
umbilical cord
EV:3000467
Made obsolete: considered as synonym to invasive ductal carcinoma
true
obsolete_infiltrating ductal carcinoma
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#protein
A biological macromolecule minimally consisting of one polypeptide chain synthesized at the ribosome.
Tomasz Adamusiak
proteins
protein
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#protein[accessedResource: MO_683][accessDate: 04-11-2010]
MO_683
polypeptide
PRO:000000001
James Malone
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001459
A protein is an (also known as polypeptides) organic compound made of amino acids arranged in a linear chain and folded into a globular form.
SNOMEDCT:237280005
GeneRIF:14634568
GeneRIF:16059745
GeneRIF:12757936
Pre-eclamptic NOS[accessedResource: DOID:10591][accessDate: 04-11-2010]
GeneRIF:15085177
GeneRIF:15163465
GeneRIF:15775999
GeneRIF:11905404
Pregnancy Toxemias[accessedResource: MSH:D011225][accessDate: 04-11-2010]
Toxemia of pregnancy (disorder)[accessedResource: DOID:10591][accessDate: 04-11-2010]
GeneRIF:14671210
GeneRIF:14671202
GeneRIF:12892901
Pre-eclampsia NOS (disorder)[accessedResource: DOID:10591][accessDate: 04-11-2010]
GeneRIF:15081636
Pre-Eclampsia
Pre-eclamptic toxemia[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
GeneRIF:12911547
Toxemias, Pregnancy
PET - Pre-eclamptic toxemia[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
GeneRIF:12651901
Pre-eclamptic toxaemia
GeneRIF:12727995
GeneRIF:12654717
Pre-eclampsia NOS[accessedResource: SNOMEDCT:288201007][accessDate: 04-11-2010]
GeneRIF:12634647
EPH Gestosis[accessedResource: MSH:D011225][accessDate: 04-11-2010]
Toxemia of pregnancy, NOS[accessedResource: SNOMEDCT:15394000][accessDate: 04-11-2010]
GeneRIF:15193868
GeneRIF:15364897
EPH - Oedema, proteinuria and hypertension of pregnancy
Gestational hypertension (disorder)
GeneRIF:16157088
GeneRIF:12859429
EPH Toxemias[accessedResource: MSH:D011225][accessDate: 04-11-2010]
EPH Toxemia[accessedResource: MSH:D011225][accessDate: 04-11-2010]
EPH Complex
Toxaemia NOS
PE - Pre-eclampsia[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
GeneRIF:12362237
PE - Pre-eclampsia
GeneRIF:15569322
Edema-Proteinuria-Hypertension Gestosis[accessedResource: MSH:D011225][accessDate: 04-11-2010]
pregnancy toxemia[accessedResource: DOID:10591][accessDate: 04-11-2010]
Toxemia NOS (disorder)[accessedResource: SNOMEDCT:237280005][accessDate: 04-11-2010]
Proteinuric hypertension of pregnancy
EPH Complex[accessedResource: MSH:D011225][accessDate: 04-11-2010]
GeneRIF:15901845
GeneRIF:16021053
GeneRIF:15042014
SNOMEDCT:15394000
PREGN TOXEMIAS
Toxemia of Pregnancy
EPH - Edema, proteinuria and hypertension of pregnancy
GeneRIF:15097234
GeneRIF:14967168
PET - Pre-eclamptic toxaemia
GeneRIF:16091310
GeneRIF:14517225
Toxemia NOS[accessedResource: SNOMEDCT:237280005][accessDate: 04-11-2010]
GeneRIF:14673478
preeclampsia
GeneRIF:12908999
MSH:D011225
Gestational hypertension[accessedResource: DOID:10591][accessDate: 04-11-2010]
GeneRIF:15082899
Pre Eclampsia[accessedResource: MSH:D011225][accessDate: 04-11-2010]
GeneRIF:15585559
Pre-eclamptic toxemia
Pre-eclampsia NOS (disorder)
Toxemia NOS (disorder)
EPH Toxemia
GeneRIF:11969342
hypertension of pregnancy NOS (disorder)
Pre-eclampsia, unspecified[accessedResource: SNOMEDCT:288201007][accessDate: 04-11-2010]
GeneRIF:12867761
GeneRIF:15817508
Toxemia NOS
GeneRIF:15097012
GeneRIF:16191421
Toxaemia of pregnancy, NOS[accessedResource: SNOMEDCT:15394000][accessDate: 04-11-2010]
GeneRIF:15140512
GeneRIF:12163461
EPH - Edema, proteinuria and hypertension of pregnancy[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
GeneRIF:11950065
Pregnancy associated hypertension
hypertension of preg.[accessedResource: DOID:10591][accessDate: 04-11-2010]
Pregnancy Toxemia
hypertension induced by pregnancy[accessedResource: DOID:10591][accessDate: 04-11-2010]
GeneRIF:12044319
GeneRIF:12545206
SNOMEDCT:288201007
GeneRIF:14662163
Toxaemia NOS[accessedResource: SNOMEDCT:237280005][accessDate: 04-11-2010]
Pregnancy associated hypertension[accessedResource: DOID:10591][accessDate: 04-11-2010]
A complication of PREGNANCY, characterized by a complex of symptoms including maternal HYPERTENSION and PROTEINURIA with or without pathological EDEMA. Symptoms may range between mild and severe. Pre-eclampsia usually occurs after the 20th week of gestation, but may develop before this time in the presence of trophoblastic disease.[accessedResource: MSH:D011225][accessDate: 04-11-2010]
GeneRIF:15544427
Toxemia of pregnancy (disorder)
GeneRIF:16021077
hypertension of preg.
GeneRIF:14746952
GeneRIF:12593997
hypertension induced by pregnancy
GeneRIF:15135235
hypertension of pregnancy NOS[accessedResource: DOID:10591][accessDate: 04-11-2010]
GeneRIF:14634580
Pre-eclampsia, unspecified
GeneRIF:15695771
GeneRIF:12699878
PREGN TOXEMIAS[accessedResource: MSH:D011225][accessDate: 04-11-2010]
Gestosis, Hypertension-Edema-Proteinuria
Toxemia of pregnancy, NOS
GeneRIF:12324185
GeneRIF:11854637
Pre-eclampsia NOS
GeneRIF:12867763
GeneRIF:15886253
NCIt:C34943
EPH - Oedema, proteinuria and hypertension of pregnancy[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
SNOMEDCT:398254007
GeneRIF:15866083
GeneRIF:11969341
PET - Pre-eclamptic toxemia
GeneRIF:16182107
Toxaemia of pregnancy[accessedResource: SNOMEDCT:15394000][accessDate: 04-11-2010]
GeneRIF:16150277
PET - Pre-eclamptic toxaemia[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
Proteinuric hypertension of pregnancy[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
hypertension of pregnancy NOS
Pre-eclamptic toxaemia[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
GeneRIF:16036389
A complication of PREGNANCY, characterized by a complex of symptoms including maternal HYPERTENSION and PROTEINURIA with or without pathological EDEMA. Symptoms may range between mild and severe. Pre-eclampsia usually occurs after the 20th week of gestation, but may develop before this time in the presence of trophoblastic disease.
EPH Toxemias
Pregnancy-induced hypertension (disorder)[accessedResource: DOID:10591][accessDate: 04-11-2010]
James Malone
GeneRIF:12897464
GeneRIF:14638622
GeneRIF:12173035
Toxaemia of pregnancy
Pre-eclampsia (disorder)[accessedResource: SNOMEDCT:398254007][accessDate: 04-11-2010]
Gestational hypertension
Gestational hypertension (disorder)[accessedResource: DOID:10591][accessDate: 04-11-2010]
Gestosis, EPH
GeneRIF:15472115
Pre-eclampsia (disorder)
GeneRIF:15110896
GeneRIF:15369653
GeneRIF:14605992
Pregnancy-induced hypertension (disorder)
DOID:10591
Toxaemia of pregnancy, NOS
Toxemia of Pregnancy[accessedResource: NCIt:C34943][accessDate: 04-11-2010]
GeneRIF:15974297
GeneRIF:15501905
GeneRIF:15784708
hypertension of pregnancy NOS (disorder)[accessedResource: DOID:10591][accessDate: 04-11-2010]
Pre-eclamptic NOS
GeneRIF:12104097
Jie Zheng
Tomasz Adamusiak
embryonic day 15.5
http://www.ebi.ac.uk/efo/EFO_0002025
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#thermal_cycler
thermocycler
thermal cycler
An instrument that is capable of repeatedly altering and maintaining specific temperatures for defined periods of time.
Polymerase_Chain_Reaction_ machine
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#thermal_cycler[accessedResource: MO_854][accessDate: 04-11-2010]
PCR_machine
James Malone
MO_854
DNA_amplifier
Ele Holloway
ITV
James Malone
Tomasz Adamusiak
(S)-(-)-a-amino-5-fluoro-3,4-dihydro-2,4-dioxo-1(2H)pyr idinepropanoic acid
James Malone
CASRN:140187-23-1
STRUCTURE_ChemicalName_IUPAC:3-(5-fluoro-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-L-alanine
DSSTox_CID:22609
DSSTox_Generic_SID:42609
Ele Holloway
(S)-(-)-5-fluorowillardiine
STRUCTURE_Formula:C7H8FN3O4
James Malone
true
1.8
duplicate of EFO_0001220
obsolete_MOLT4
Carcinoma of the Prostate
NCIt:C4863
Prostate Cancer
Tomasz Adamusiak
Carcinoma of Prostate
Cancer of the Prostate[accessedResource: NCIt:C4863][accessDate: 04-11-2010]
Cancer of Prostate[accessedResource: NCIt:C4863][accessDate: 04-11-2010]
Cancer of the Prostate
DOID:10286
prostate carcinoma
One of the most common malignant tumors afflicting men. The majority of carcinomas arise in the peripheral zone and a minority occur in the central or the transitional zone of the prostate gland. Grossly, prostatic carcinomas appear as ill-defined yellow areas of discoloration in the prostate gland lobes. Adenocarcinomas represent the overwhelming majority of prostatic carcinomas. Prostatic-specific antigen (PSA) serum test is widely used as a screening test for the early detection of prostatic carcinoma. Treatment options include radical prostatectomy, radiation therapy, androgen ablation and cryotherapy. Watchful waiting or surveillance alone is an option for older patients with low-grade or low-stage disease. -- 2002
Carcinoma of Prostate[accessedResource: NCIt:C4863][accessDate: 04-11-2010]
Prostate Cancer[accessedResource: NCIt:C4863][accessDate: 04-11-2010]
One of the most common malignant tumors afflicting men. The majority of carcinomas arise in the peripheral zone and a minority occur in the central or the transitional zone of the prostate gland. Grossly, prostatic carcinomas appear as ill-defined yellow areas of discoloration in the prostate gland lobes. Adenocarcinomas represent the overwhelming majority of prostatic carcinomas. Prostatic-specific antigen (PSA) serum test is widely used as a screening test for the early detection of prostatic carcinoma. Treatment options include radical prostatectomy, radiation therapy, androgen ablation and cryotherapy. Watchful waiting or surveillance alone is an option for older patients with low-grade or low-stage disease. -- 2002[accessedResource: NCIt:C4863][accessDate: 04-11-2010]
James Malone
Cancer of Prostate
Carcinoma of the Prostate[accessedResource: NCIt:C4863][accessDate: 04-11-2010]
A chorion cell line is a cell line that is derived from the chorion.
chorion cell line
CHEBI:50629
James Malone
http://www.ebi.ac.uk/efo/EFO_0001890
A cyclooxygenase inhibitor with specificity for cyclooxygenase 2.
cyclooxygenase 2 inhibitor
COX-2 inhibitor
http://www.ebi.ac.uk/efo/EFO_0002668
Antipiricullin
Antimycin A1
C28H40N2O9
antimycin A
CHEBI:22584
InChI=1/C28H40N2O9/c1-6-7-8-9-11-20-25(39-22(32)14-16(2)3)18(5)38-28(36)23(17(4)37-27(20)35)30-26(34)19-12-10-13-21(24(19)33)29-15-31/h10,12-13,15-18,20,23,25,33H,6-9,11,14H2,1-5H3,(H,29,31)(H,30,34)/t17-,18+,20-,23+,25+/m1/s1/f/h29-30H
antimycin A1b
(2R,3S,6S,7R,8R)-3-[(3-formamido-2-hydroxybenzoyl)amino]-8-hexyl-2,6-dimethyl-4,9-dioxo-1,5-dioxonan-7-yl 3-methylbutanoate
A nine-membered bis-lactone having methyl substituents at the 2- and 6-positions, an n-hexyl substituent at the 8-position, an acyloxy substituent at the 7-position and an aroylamido substituent at the 3-position. It is produced by Streptomyces bacteria and has found commercial use as a fish poison.
Fintrol
Virosin
[H]C(=O)Nc1cccc(C(=O)N[C@H]2[C@@H](C)OC(=O)[C@H](CCCCCC)[C@@H](OC(=O)CC(C)C)[C@H](C)OC2=O)c1O
InChIKey=UIFFUZWRFRDZJC-MBZNLELHDN
Tomasz Adamusiak
presumptive endoderm
ZFA:0000416
Striatum
Use corpus striatum instead (EFO_0000381)
obsolete_CNS brain striatum MMHCC
NCIt:C22622
CNS - Brain - Striatum (MMHCC)
Striatum[accessedResource: NCIt:C22622][accessDate: 10-05-2010]
CNS - Brain - Striatum (MMHCC)[accessedResource: NCIt:C22622][accessDate: 10-05-2010]
true
FBbt:00005428
dorsal ectoderm anlage
dorsal ectoderm anlage[accessedResource: FBbt:00005428][accessDate: 04-11-2010]
James Malone
ectoderm
The outer of the three germ layers of the embryo (the other two being mesoderm and endoderm). Ectoderm gives rise to epidermis and neural tissue.
BTO:0000315
The outer of the three germ layers of the embryo (the other two being mesoderm and endoderm). Ectoderm gives rise to epidermis and neural tissue.[accessedResource: BTO:0000315][accessDate: 04-11-2010]
Tomasz Adamusiak
floor plate rhombomere 7
ZFA:0000904
Tomasz Adamusiak
floor plate rhombomere 2
ZFA:0000763
James Malone
BV173
Ele Holloway
CASRN:58418-73-8
octylhomovanillamide
DSSTox_CID:20568
DSSTox_Generic_SID:40568
STRUCTURE_Formula:C17H27NO3
Ele Holloway
James Malone
STRUCTURE_ChemicalName_IUPAC:2-(4-hydroxy-3-methoxyphenyl)-N-octylacetamide
Tomasz Adamusiak
OHV
Jie Zheng
Tomasz Adamusiak
embryonic day 8.25
flufenamic acid
Tecramine
Meralen
Surika
N-(alpha,alpha,alpha-trifluoro-m-tolyl)anthranilic acid
James Malone
acide flufenamique
fluphenamic acid
2-[3-(trifluoromethyl)anilino]benzoic acid
Flufenaminsaeure
3'-trifluoromethyldiphenylamine-2-carboxylic acid
InChIKey=LPEPZBJOKDYZAD-LILDFLRNCJ
C14H10F3NO2
Parlef
CHEBI:42638
Ansatin
Achless
acidum flufenamicum
FFA
Arlef
N-(3-trifluoromethylphenyl)anthranilic acid
2-{[3-(trifluoromethyl)phenyl]amino}benzoic acid
OC(=O)c1ccccc1Nc1cccc(c1)C(F)(F)F
Sastridex
http://www.ebi.ac.uk/efo/EFO_0001537
acido flufenamico
Fullsafe
InChI=1/C14H10F3NO2/c15-14(16,17)9-4-3-5-10(8-9)18-12-7-2-1-6-11(12)13(19)20/h1-8,18H,(H,19,20)/f/h19H
Ristogen
Paraflu
James Malone
Strain or line specific to Arabidopsis thaliana.
Arabidopsis thaliana
Tomasz Adamusiak
presumptive forebrain
ZFA:0000062
A constricted portion of an organ or part; especially: the narrow outer end of the uterus.[accessedResource: BTO:0001421][accessDate: 04-11-2010]
Cervical canal
Cervical canal of uterus[accessedResource: FMAID:17740][accessDate: 04-11-2010]
SAEL:118
MAT:0000292
BTO:0001421
Cervical canal[accessedResource: FMAID:17740][accessDate: 04-11-2010]
uterine cervix
EV:0100114
Cervix of uterus
uterine cervix[accessedResource: BTO:0001421][accessDate: 04-11-2010]
cervix
A constricted portion of an organ or part; especially: the narrow outer end of the uterus.
Cervix of uterus[accessedResource: FMAID:17740][accessDate: 04-11-2010]
FMAID:17740
Neck of uterus
Neck of uterus[accessedResource: FMAID:17740][accessDate: 04-11-2010]
James Malone
Cervical canal of uterus
James Malone
CS57883 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158907&type=germplasm
CS57883
http://www.arabidopsis.org/servlets/TairObject?id=1005158907&type=germplasm
James Malone
ovarian carcinoma
James Malone
embryonic dorsal apodeme
FBbt:00005745
Ele Holloway
James Malone
RPMI6666
A process by which totally or partially complementary, single-stranded nucleic acids are combined into a single molecule called heteroduplex or homoduplex to an extent depending on the amount of complementarity.
a planned process by which totally or partially complementary, single-stranded nucleic acids are combined into a single molecule called heteroduplex or homoduplex to an extent depending on the amount of complementarity.
nucleic acid hybridization
James Malone
Ischemic cardiomyopathy is a cardiomyopathy in which a weakness in the muscle of the heart due to inadequate oxygen delivery to the myocardium with coronary artery disease being the most common cause.
ischemic cardiomyopathy
WEB:http://en.wikipedia.org/wiki/Cardiomyopathy#Ischemic_cardiomyopathy
Tomasz Adamusiak
segmental intercostal artery
ZFA:0000677
true
A derived unit which is a standard measure of the amount of radiation emitted by a given radiation source as well as the amount of radiation absorbed or deposited in a specific material by a radiation source.
radiation unit
James Malone
HCC202
Any of the system of communicating cavities in the brain that are continuous with the central canal of the spinal cord.[accessedResource: BTO:0001442][accessDate: 04-11-2010]
James Malone
A brain ventricle is a brain structure consisting of communicating cavities in the brain that are continuous with the central canal of the spinal cord.
Any of the system of communicating cavities in the brain that are continuous with the central canal of the spinal cord.
brain ventricle
BTO:0001442
James Malone
Caki-2
Caki2
Ele Holloway
umbilical vein
NCIt:C33830
A vein that passes through the umbilical cord to the fetus and returns the oxygenated and nutrient blood from the placenta to the fetus.[accessedResource: BTO:0001509][accessDate: 04-11-2010]
A vein that passes through the umbilical cord to the fetus and returns the oxygenated and nutrient blood from the placenta to the fetus.
James Malone
BTO:0001509
James Malone
Disorder of metabolism NOS[accessedResource: SNOMEDCT:267456000][accessDate: 04-11-2010]
GeneRIF:15677734
NCIt:C3235
METABOLISM DISORDER NOS
Diseases, Metabolic
metabolism disorder[accessedResource: DOID:0014667][accessDate: 04-11-2010]
Generalized metabolic disorder[accessedResource: SNOMEDCT:30390004][accessDate: 04-11-2010]
GeneRIF:15246202
DIS METAB[accessedResource: MSH:D008659][accessDate: 04-11-2010]
A congenital (due to inherited enzyme abnormality) or acquired (due to failure of a metabolic important organ) disorder resulting from an abnormal metabolic process. -- 2003
GeneRIF:14592951
DIS METAB
Metabolic disorder[accessedResource: DOID:0014667][accessDate: 04-11-2010]
Unspecified disorder of metabolism[accessedResource: DOID:0014667][accessDate: 04-11-2010]
GeneRIF:12215968
Metabolic disease (disorder)
Thesaurismoses[accessedResource: MSH:D008659][accessDate: 04-11-2010]
Disorder of metabolism NOS (disorder)[accessedResource: SNOMEDCT:267456000][accessDate: 04-11-2010]
GeneRIF:12824951
GeneRIF:12815182
Metabolic disease, NOS[accessedResource: SNOMEDCT:75934005][accessDate: 04-11-2010]
Metabolic disorders
Metabolic disease (disorder)[accessedResource: SNOMEDCT:75934005][accessDate: 04-11-2010]
GeneRIF:12707035
SNOMEDCT:30390004
disease of metabolism
MD - Metabolic disorders[accessedResource: SNOMEDCT:75934005][accessDate: 04-11-2010]
Thesaurismoses
GeneRIF:12242462
Disorder of metabolism NOS (disorder)
Metabolic disease, NOS
Generic term for diseases caused by an abnormal metabolic process. It can be congenital due to inherited enzyme abnormality (METABOLISM, INBORN ERRORS) or acquired due to disease of an endocrine organ or failure of a metabolically important organ such as the liver. (Stedman, 26th ed)
Metabolic Diseases[accessedResource: MSH:D008659][accessDate: 04-11-2010]
Generalized metabolic disorder (disorder)[accessedResource: SNOMEDCT:30390004][accessDate: 04-11-2010]
ICD9:277.9
metabolism disorder
Generic term for diseases caused by an abnormal metabolic process. It can be congenital due to inherited enzyme abnormality (METABOLISM, INBORN ERRORS) or acquired due to disease of an endocrine organ or failure of a metabolically important organ such as the liver. (Stedman, 26th ed)[accessedResource: MSH:D008659][accessDate: 04-11-2010]
Unspecified disorder of metabolism
MD - Metabolic disorders
Generalised metabolic disorder
Thesaurismosis[accessedResource: MSH:D008659][accessDate: 04-11-2010]
Thesaurismosis
GeneRIF:15231871
GeneRIF:15277400
Generalized metabolic disorder (disorder)
Disorder of metabolism NOS
SNOMEDCT:75934005
Metabolic disorder, NOS
Metabolic disorder, NOS[accessedResource: SNOMEDCT:75934005][accessDate: 04-11-2010]
Metabolic Disorder
METABOLISM DISORDER NOS[accessedResource: ICD9:277.9][accessDate: 04-11-2010]
Generalised metabolic disorder[accessedResource: SNOMEDCT:30390004][accessDate: 04-11-2010]
disease of metabolism[accessedResource: DOID:0014667][accessDate: 04-11-2010]
MSH:D008659
A congenital (due to inherited enzyme abnormality) or acquired (due to failure of a metabolic important organ) disorder resulting from an abnormal metabolic process. -- 2003[accessedResource: NCIt:C3235][accessDate: 04-11-2010]
DOID:0014667
SNOMEDCT:267456000
GeneRIF:16018179
Generalized metabolic disorder
GeneRIF:12093894
metabolic disease
Ele Holloway
James Malone
CGTHW1
4-Pregnene-3,20-dione
progesterone
pregn-4-ene-3,20-dione
(S)-Progesterone
Gelbkoerperhormon
Agolutin
[H][C@@]12CCC3=CC(=O)CC[C@]3(C)[C@@]1([H])CC[C@]1(C)[C@H](CC[C@@]21[H])C(C)=O
InChIKey=RJKFOVLPORLFTN-LEKSSAKUBC
17alpha-progesterone
(S)-Pregn-4-en-3,20-dione
corpus luteum hormone
CHEBI:17026
http://www.ebi.ac.uk/efo/EFO_0001598
(S)-4-Pregnene-3,20-dione
Progesteron
A 3-oxo Delta(4)-steroid that has formula C21H30O2.
InChI=1/C21H30O2/c1-13(22)17-6-7-18-16-5-4-14-12-15(23)8-10-20(14,2)19(16)9-11-21(17,18)3/h12,16-19H,4-11H2,1-3H3/t16-,17+,18-,19-,20-,21+/m0/s1
Akrolutin
luteohormone
C21H30O2
A steroid hormone that has formula C21H30O2.
Delta(4)-pregnene-3,20-dione
Crinone
Hippocampus major[accessedResource: FMAID:62493][accessDate: 04-11-2010]
Tomasz Adamusiak
hippocampus proper
Cornu ammonis
A curved elongated ridge that extends over the floor of the descending horn of each lateral ventricle of the brain and consists of gray matter covered on the ventricular surface with white matter;nThe hippocampus is a part of the temporal lobe, which has a well established role in learning, memory and emotion.
CNS - Brain - Hippocampus (MMHCC)
NIFSTD:birnlex_726
Ammon's horn[accessedResource: NIFSTD:birnlex_726][accessDate: 04-11-2010]
ammon horn[accessedResource: NIFSTD:birnlex_721][accessDate: 04-11-2010]
SAEL:51
James Malone
A part of the brain consisting of a three layered cortex located in the forebrain bordering the medial surface of the lateral ventricle. The term hippocampus is often used synonymously with hippocampal formation which consists of the hippocampus proper or Cornu Ammonis, the dentate gyrus and the subiculum.
NCIt:C22615
MAT:0000114
FMAID:62493
Ammon's horn
EMAPA:19148
hippocampus
MA:0000191
EV:0100180
Hippocampus major
A part of the brain consisting of a three layered cortex located in the forebrain bordering the medial surface of the lateral ventricle. The term hippocampus is often used synonymously with hippocampal formation which consists of the hippocampus proper or Cornu Ammonis, the dentate gyrus and the subiculum.[accessedResource: NIFSTD:birnlex_721][accessDate: 04-11-2010]
CNS - Brain - Hippocampus (MMHCC)[accessedResource: NCIt:C22615][accessDate: 04-11-2010]
A curved elongated ridge that extends over the floor of the descending horn of each lateral ventricle of the brain and consists of gray matter covered on the ventricular surface with white matter;nThe hippocampus is a part of the temporal lobe, which has a well established role in learning, memory and emotion.[accessedResource: BTO:0000601][accessDate: 04-11-2010]
BTO:0000601
Cornu Ammonis[accessedResource: NIFSTD:birnlex_726][accessDate: 04-11-2010]
NIFSTD:birnlex_721
hippocampus proper[accessedResource: NIFSTD:birnlex_721][accessDate: 04-11-2010]
ammon horn
Ele Holloway
James Malone
A427
Tomasz Adamusiak
AIDS dementia complex[accessedResource: DOID:1305][accessDate: 04-11-2010]
AIDS dementia complex
HIV associated cognitive and motor complex[accessedResource: DOID:1305][accessDate: 04-11-2010]
AIDS dementia
AIDS with dementia (disorder)[accessedResource: DOID:1305][accessDate: 04-11-2010]
acquired immune deficiency syndrome dementia complex[accessedResource: DOID:1305][accessDate: 04-11-2010]
HIV encephalitis
Ele Holloway
AIDS with dementia (disorder)
HIV associated cognitive and motor complex
DOID:1305
NCIt:C2864
Acquired immune deficiency syndrome dementia complex
Tomasz Adamusiak
ventral imaginal precursor
FBbt:00005834
Tomasz Adamusiak
esophageal epithelium
NCIt:C49221
MA:0000142
A glandular structure of largely lymphoid tissue that functions especially in the development of the body's immune system, is present in the young of most vertebrates typically in the upper anterior chest or at the base of the neck, and tends to atrophy in the adult.[accessedResource: BTO:0001374][accessDate: 04-11-2010]
ZFA:0001078
FMAID:9607
EV:0100138
TAO:0001078
MFO:0003240
XAO:0000163
James Malone
EMAPA:18768
A glandular structure of largely lymphoid tissue that functions especially in the development of the body's immune system, is present in the young of most vertebrates typically in the upper anterior chest or at the base of the neck, and tends to atrophy in the adult.
thymus
EHDAA:9119
MAT:0000080
Thymus gland[accessedResource: FMAID:9607][accessDate: 04-11-2010]
Thymus gland
BTO:0001374
SAEL:107
KS-IMM cell[accessedResource: BTO:0002070][accessDate: 04-11-2010]
The tumorigenic KS IMM cell line derives from Kaposi's sarcoma (KS), a highly angiogenic tumor.
James Malone
The tumorigenic KS IMM cell line derives from Kaposi's sarcoma (KS), a highly angiogenic tumor.[accessedResource: BTO:0002070][accessDate: 04-11-2010]
BTO:0002070
Ele Holloway
A KS-IMM is a cell line.
A KS-IMM is bearer of a Kaposi's sarcoma.
KS IMM cell
KS-IMM
KSIMM cell[accessedResource: BTO:0002070][accessDate: 04-11-2010]
KSIMM cell
Tomasz Adamusiak
epihyal
ZFA:0000627
James Malone
true
Strain or line specific to Drosophila melanogaster
2.0.1
consolodation of strain with taxon, all subclasses moved to Drosophila melanogaster
obsolete_Drosophila melanogaster strain
James Malone
HMCB
Ele Holloway
James Malone
A site from which a sample, i.e. a statistically representative of the whole, is extracted from the whole. e.g. a liver sample
sampling site
James Malone
http://www.ebi.ac.uk/efo/EFO_0002645
Mus caroli
Ryukyu mouse
Epithelium of the respiratory portion of the bronchial tree.[accessedResource: BTO:0000419][accessDate: 04-11-2010]
An endo-epithelial cell of the respiratory tract.[accessedResource: CL:0002368][accessDate: 04-11-2010]
respiratory epithelial cell[accessedResource: CL:0002368][accessDate: 04-11-2010]
respiratory epithelium
respiratory epithelium[accessedResource: BTO:0000419][accessDate: 04-11-2010]
BTO:0000419
airway epithelium
An endo-epithelial cell of the respiratory tract.
Epithelium of the respiratory portion of the bronchial tree.
Tomasz Adamusiak
respiratory epithelial cell
CL:0002368
airway epithelium[accessedResource: BTO:0000419][accessDate: 04-11-2010]
airway epithelial cell
Jie Zheng
Tomasz Adamusiak
renal artery
NCIt:C12778
CHEBI:3766
Clozapin
CN1CCN(CC1)C1=Nc2cc(Cl)ccc2Nc2ccccc12
http://www.ebi.ac.uk/efo/EFO_0001510
clozapine
A benzodiazepine that has formula C18H19ClN4.
clozapinum
InChIKey=QZUDBNBUXVUHMW-UHFFFAOYAL
James Malone
C18H19ClN4
CN1CCN(CC1)C2=Nc3cc(Cl)ccc3Nc4ccccc24
InChI=1/C18H19ClN4/c1-22-8-10-23(11-9-22)18-14-4-2-3-5-15(14)20-16-7-6-13(19)12-17(16)21-18/h2-7,12,20H,8-11H2,1H3
8-chloro-11-(4-methylpiperazin-1-yl)-5H-dibenzo[b,e][1,4]diazepine
clozapina
MA:0000185
EV:0100166
EMAPA:17544
The surface layer of gray matter of the cerebrum that functions chiefly in coordination of sensory and motor information.[accessedResource: BTO:0000233][accessDate: 04-11-2010]
perikaryal rind[accessedResource: FBbt:00003625][accessDate: 04-11-2010]
Superficial layer of the brain, composed of glia and the cell bodies of neurons (soma).[accessedResource: FBbt:00003625][accessDate: 04-11-2010]
BTO:0000233
brain cortex
brain cortex[accessedResource: BTO:0000233][accessDate: 04-11-2010]
FBbt:00003625
EHDAA:5464
James Malone
Superficial layer of the brain, composed of glia and the cell bodies of neurons (soma).
Cortex of cerebrum
adult brain cortex[accessedResource: FBbt:00003625][accessDate: 04-11-2010]
perikaryal rind
adult brain cortex
cerebral cortex
MAT:0000108
Cortex of cerebral hemisphere
Cortex of cerebral hemisphere[accessedResource: FMAID:61830][accessDate: 04-11-2010]
Cortex of cerebrum[accessedResource: FMAID:61830][accessDate: 04-11-2010]
The surface layer of gray matter of the cerebrum that functions chiefly in coordination of sensory and motor information.
SAEL:20
FMAID:61830
Synonym of environmental factor
James Malone
true
The external elements and conditions which surround, influence, and affect the life and development of an organism or population.
obsolete_environment
CHEBI:50469
James Malone
http://www.ebi.ac.uk/efo/EFO_0001887
phospholipase A2 inhibitor
phospholipase A2 inhibitors
Ele Holloway
James Malone
NCI-H2087
A bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone.[accessedResource: CL:0000062][accessDate: 04-11-2010]
James Malone
A bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone.
osteoblast
CL:0000062
mesonephrpric kidney
middle kidney
kidney
mesonephron[accessedResource: BTO:0001542][accessDate: 04-11-2010]
corpus Wolffi[accessedResource: BTO:0001542][accessDate: 04-11-2010]
middle kidney[accessedResource: BTO:0001542][accessDate: 04-11-2010]
The excretory organ of the embryo, arising caudal to the pronephros or pronephric rudiments and using its duct; it consists of a long tube in the lower part of the body cavity, running parallel with the vertebral axis and joined at right angles by a row of twisting tubes.
mesonephros
TAO:0000529
MAT:0000118
corpus Wolffi
James Malone
The functioning kidney in fish and amphibia
mesonephros - adult
The functioning kidney in fish and amphibia[accessedResource: MAT:0000118][accessDate: 04-11-2010]
mesonephrpric kidney[accessedResource: MAT:0000118][accessDate: 04-11-2010]
kidney - fish
wolffian body[accessedResource: BTO:0001542][accessDate: 04-11-2010]
XAO:0000154
ZFA:0000529
BTO:0001542
mesonephron
kidney - fish[accessedResource: MAT:0000118][accessDate: 04-11-2010]
MFO:0003300
kidney[accessedResource: TAO:0000529][accessDate: 04-11-2010]
wolffian body
mesonephros - adult[accessedResource: MAT:0000118][accessDate: 04-11-2010]
The excretory organ of the embryo, arising caudal to the pronephros or pronephric rudiments and using its duct; it consists of a long tube in the lower part of the body cavity, running parallel with the vertebral axis and joined at right angles by a row of twisting tubes.[accessedResource: BTO:0001542][accessDate: 04-11-2010]
James Malone
Shoulder Blade
scapula
NCIt:C12783
scapula bone[accessedResource: BTO:0001218][accessDate: 04-11-2010]
The flat triangle-shaped bone that connects the humerus with the clavicle in the back of the shoulder.[accessedResource: NCIt:C12783][accessDate: 04-11-2010]
BTO:0001218
Either of a pair of large triangular bones lying one in each dorsal lateral scapula: part of the thorax, being the principal bone of the corresponding half of the shoulder girdle, and articulating with the corresponding clavicle or coracoid.[accessedResource: BTO:0001218][accessDate: 04-11-2010]
The flat triangle-shaped bone that connects the humerus with the clavicle in the back of the shoulder.
Shoulder Blade[accessedResource: NCIt:C12783][accessDate: 04-11-2010]
scapula bone
Either of a pair of large triangular bones lying one in each dorsal lateral scapula: part of the thorax, being the principal bone of the corresponding half of the shoulder girdle, and articulating with the corresponding clavicle or coracoid.
Tomasz Adamusiak
embryonic stomatogastric nervous system
FBbt:00001069
James Malone
vastus lateralis
vastus externus[accessedResource: BTO:0001563][accessDate: 04-11-2010]
BTO:0001563
The division of the quadriceps muscle that covers the outer anterior aspect of the femur, arises chiefly from the femur, and inserts into the outer border of the patella by a flat tendon which blends with that of the other divisions of the muscle and sends an expansion to the capsule of the knee.
The division of the quadriceps muscle that covers the outer anterior aspect of the femur, arises chiefly from the femur, and inserts into the outer border of the patella by a flat tendon which blends with that of the other divisions of the muscle and sends an expansion to the capsule of the knee.[accessedResource: BTO:0001563][accessDate: 04-11-2010]
NCIt:C53073
vastus externus
true
heteroatomic molecular entity
A drug, solvent, chemical, etc., with a property that can be measured such as concentration.
Tomasz Adamusiak
James Malone
heteroatomic molecular entities
A molecular entity consisting of two or more chemical elements.
chemical compound
Tomasz Adamusiak
intersegmental vessel
ZFA:0001285
A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes.
CARO:0000027
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#male
PATO:0000384
A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes.[accessedResource: PATO:0000384][accessDate: 04-11-2010]
male
MO_652
Tomasz Adamusiak
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#male[accessedResource: MO_652][accessDate: 04-11-2010]
A large granular lymphocyte capable of killing a tumor or microbial cell without prior exposure to the target cell and without having it presented with or marked by a histocompatibility antigen.[accessedResource: BTO:0000914][accessDate: 04-11-2010]
A large granular lymphocyte capable of killing a tumor or microbial cell without prior exposure to the target cell and without having it presented with or marked by a histocompatibility antigen.
A lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells.
large granular lymphocyte[accessedResource: CL:0000623][accessDate: 04-11-2010]
A lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells.[accessedResource: CL:0000623][accessDate: 04-11-2010]
NK cell[accessedResource: CL:0000623][accessDate: 04-11-2010]
CL:0000623
James Malone
natural killer
natural killer cell
null cell
null cell[accessedResource: CL:0000623][accessDate: 04-11-2010]
BTO:0000914
NK cell
large granular lymphocyte
Tomasz Adamusiak
ILSXISS62/TejJ
http://www.ebi.ac.uk/efo/EFO_0001607
Pam2CSK4
CHEBI:46889
S-[2,3-bis(hexadecanoyloxy)propyl]-L-cysteinyl-L-seryl-L-lysyl-L-lysyl-L-lysyl-L-lysine
S-[2,3-bis(palmitoyloxy)propyl]-Cys-Ser-Lys-Lys-Lys-Lys
A diacyl lipopeptide that has formula C65H126N10O12S.
InChI=1/C65H126N10O12S/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-41-58(77)86-48-51(87-59(78)42-28-26-24-22-20-18-16-14-12-10-8-6-4-2)49-88-50-52(70)60(79)75-57(47-76)64(83)73-54(38-30-34-44-67)62(81)71-53(37-29-33-43-66)61(80)72-55(39-31-35-45-68)63(82)74-56(65(84)85)40-32-36-46-69/h51-57,76H,3-50,66-70H2,1-2H3,(H,71,81)(H,72,80)(H,73,83)(H,74,82)(H,75,79)(H,84,85)/t51?,52-,53-,54-,55-,56-,57-/m0/s1/f/h71-75,84H
S-[2,3-bis(palmitoyloxy)-(2RS)-propyl]-[R]-cysteinyl-[S]-seryl-[S]-lysyl-[S]-lysyl-[S]-lysyl-[S]-lysine
S-[2,3-bis(palmitoyloxy)propyl]-L-cysteinyl-L-seryl-L-lysyl-L-lysyl-L-lysyl-L-lysine
C65H126N10O12S
CCCCCCCCCCCCCCCC(=O)OCC(CSC[C@H](N)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(O)=O)OC(=O)CCCCCCCCCCCCCCC
InChIKey=LJUIOEFZFQRWJG-URZMOCQLDI
BTO:0000387
endocardium
ZFA:0001320
Layer that lines the lumen of the heart.[accessedResource: ZFA:0001320][accessDate: 04-11-2010]
MAT:0000455
FMAID:7280
James Malone
TAO:0001320
EMAPA:17868
EV:0100021
Tunica intima which has as its parts the endothelium of endocardium and the fibroelastic connective tissue that surrounds the cavity of a cardiac chamber.
A thin serous membrane lining the cavities of the heart.
A thin serous membrane lining the cavities of the heart.[accessedResource: BTO:0000387][accessDate: 04-11-2010]
Layer that lines the lumen of the heart.
MA:0000076
NB4
MDAMB361
James Malone
Tomasz Adamusiak
spinocerebellar ataxia type 1
Ele Holloway
James Malone
DG75
Tomasz Adamusiak
primitive olfactory epithelium
ZFA:0001431
Inflammation of chorionic villi
Tomasz Adamusiak
Villitis (disorder)[accessedResource: SNOMEDCT:388604008][accessDate: 04-11-2010]
Villositis[accessedResource: SNOMEDCT:388604008][accessDate: 04-11-2010]
Villitis (disorder)
Inflammation of chorionic villi[accessedResource: SNOMEDCT:388604008][accessDate: 04-11-2010]
villitis
SNOMEDCT:388604008
Villositis
James Malone
An instrument design is an information entity that describes the setup and design of an instrument.
instrument design
CASRN:131860-33-8
azoxystrobin
DSSTox_Generic_SID:32520
STRUCTURE_Formula:C22H17N3O5
STRUCTURE_ChemicalName_IUPAC:methyl (2E)-2-(2-{[6-(2-cyanophenoxy)pyrimidin-4-yl]oxy}phenyl)-3-methoxyacrylate
DSSTox_CID:12520
James Malone
Tomasz Adamusiak
Ele Holloway
large cell carcinomas
Tomasz Adamusiak
A malignant epithelial neoplasm composed of large, atypical cells.
NCIt:C3780
A malignant epithelial neoplasm composed of large, atypical cells.[accessedResource: NCIt:C3780][accessDate: 04-11-2010]
large cell lung carcinoma
Large Cell Carcinoma
large cell carcinomas[accessedResource: NCIt:C3780][accessDate: 04-11-2010]
Carcinoma, Large Cell[accessedResource: NCIt:C3780][accessDate: 04-11-2010]
Tomasz Adamusiak
moderate heart failure
NYHA class III
Tomasz Adamusiak
primary neuron hindbrain
ZFA:0000821
James Malone
CS57551 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158575&type=germplasm
CS57551
http://www.arabidopsis.org/servlets/TairObject?id=1005158575&type=germplasm
STRUCTURE_Formula:C20H13N4NaO6S2
DSSTox_Generic_SID:39744
DSSTox_CID:19744
Ele Holloway
ferrozine
STRUCTURE_ChemicalName_IUPAC:sodium 4-[3-pyridin-2-yl-5-(4-sulfophenyl)-1,2,4-triazin-6-yl]benzenesulfonate
James Malone
CASRN:69898-45-9
Tomasz Adamusiak
rifampicin
13292-46-1
BTO:0000390
A triploid nutritive tissue resulting from the fusion of a haploid sperm nucleus with the two haploid polar nuclei in the ovule of angiosperms.[accessedResource: BTO:0000390][accessDate: 04-11-2010]
GRO:0005361[accessedResource: BTO:0000390][accessDate: 04-11-2010]
GRO:0005361
MAT:0000227
A triploid nutritive tissue resulting from the fusion of a haploid sperm nucleus with the two haploid polar nuclei in the ovule of angiosperms.
PO:0009089
endosperm
James Malone
James Malone
mucinous carcinoma
A lateral outgrowth from a plant stem that is typically a flattened expanded variably shaped greenish organ, constitutes a unit of the foliage, and functions primarily in food manufacture by photosynthesis.[accessedResource: BTO:0000713][accessDate: 04-11-2010]
PO:0009025
A lateral outgrowth from a plant stem that is typically a flattened expanded variably shaped greenish organ, constitutes a unit of the foliage, and functions primarily in food manufacture by photosynthesis.
MAT:0000234
James Malone
ZEA:0015031
GRO:0005306
GRO:0005306[accessedResource: BTO:0000713][accessDate: 04-11-2010]
BTO:0000713
leaf
sodium valproate
1069-66-5
27/09/1946
37072
C8H15NaO2
sodium 2-propylpentanoate
Tomasz Adamusiak
CASRN:98632-70-3
STRUCTURE_ChemicalName_IUPAC:2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl-(1->4)-2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl-(1->4)-2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl-(1->4)-2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl-(1->4)-2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl-(1->4)-2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl-(1->4)-2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl-(1->4)-2-(acetylamino)-2-deoxy-beta-D-glucopyranose
chitooctaose
DSSTox_Generic_SID:40445
DSSTox_CID:20445
STRUCTURE_Formula:C64H106N8O41
chitin octamer
James Malone
Ele Holloway
A principal artery that originates in the aorta. It supplies blood to the muscular tissue of the heart.[accessedResource: NCIt:C12843][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
A principal artery that originates in the aorta. It supplies blood to the muscular tissue of the heart.
coronary artery
NCIt:C12843
Tomasz Adamusiak
caudal vein plexus
ZFA:0001286
Tomasz Adamusiak
trunk neural crest
ZFA:0001024
human embryonic kidney cell
James Malone
HEK293
MCC:0000006
Ele Holloway
James Malone
A human cell line derived from some renal leiomyeloblastoma
G402
SK-ES-1
James Malone
Ele Holloway
SK ES1
http://www.ebi.ac.uk/efo/EFO_0001708
James Malone
Tomasz Adamusiak
ng
MO_796
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ng[accessedResource: MO_796][accessDate: 04-11-2010]
Jie Zheng
nanogram
A mass unit which is equal to one thousandth of one millionth of a gram or 10^[-9] g.
true
A microgram is a mass unit which is equal to 1 gram x 10^-9
James Malone
GM12814
Ele Holloway
James Malone
http://www.ebi.ac.uk/efo/EFO_0002485
16-ketoestradiol
CHEBI:34165
Tomasz Adamusiak
ventricular system
ZFA:0001261
Ele Holloway
James Malone
Tomasz Adamusiak
calicheamicin gamma1
CASRN:108212-75-5
James Malone
DSSTox_Generic_SID:C18H32O2
CASRN:2420-56-6
Ele Holloway
Tomasz Adamusiak
STRUCTURE_Formula:(10E,12Z)-octadeca-10,12-dienoic acid
DSSTox_CID:40628
trans-10,cis-12-conjugated linoleic acid
Tomasz Adamusiak
spinocerebellar ataxia type 7
Denotes the inhabitants of the Philippine Islands, a person from there, or their descendants elsewhere.[accessedResource: NCIt:C43393][accessDate: 04-11-2010]
Tomasz Adamusiak
Denotes the inhabitants of the Philippine Islands, a person from there, or their descendants elsewhere.
Filipino
NCIt:C43393
AAO:0000157
fat body sensu amphibia
Fat_bodies[accessedResource: MAT:0000456][accessDate: 04-11-2010]
MAT:0000456
James Malone
An adipose tissue associated with the amphibiian gonad
An adipose tissue associated with the amphibiian gonad[accessedResource: MAT:0000456][accessDate: 04-11-2010]
Fat_bodies
James Malone
PAC2
UO:0000032
h
http://www.ebi.ac.uk/efo/EFO_0001790
An hour is a derived time unit which is equal to 3600 seconds or 60 minutes.
hour
A time unit which is equal to 3600 seconds or 60 minutes.
true
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#time_series_design[accessedResource: MO_887][accessDate: 04-11-2010]
Tomasz Adamusiak
time series design
MO_887
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#time_series_design
James Malone
http://www.ebi.ac.uk/efo/EFO_0002650
Pan paniscus
Bonobo
pygmy chimpanzee
CHEBI:50505
James Malone
http://www.ebi.ac.uk/efo/EFO_0001889
Substance that sweeten food, beverages, medications, etc.
sweetening agent
Disorder of myocardium[accessedResource: SNOMEDCT:57809008][accessDate: 04-11-2010]
Other primary cardiomyopathies (disorder)[accessedResource: SNOMEDCT:195017006][accessDate: 04-11-2010]
CARDIOMYOPATH IN OTH DIS[accessedResource: ICD9:425.8][accessDate: 04-11-2010]
James Malone
Other primary cardiomyopathies (disorder)
A disease of the heart muscle or myocardium proper. Cardiomyopathies may be classified as either primary or secondary, on the basis of etiology, or on the pathophysiology of the lesion: hypertrophic, dilated, or restrictive.
Myocardiopathy, NOS[accessedResource: SNOMEDCT:85898001][accessDate: 04-11-2010]
SNOMEDCT:195022006
[X]Cardiomyopathy in other diseases classified elsewhere
Other primary cardiomyopathy NOS (disorder)
Cardiomyopathy NOS (disorder)
ICD9:425.8
[X]Cardiomyopathy in other diseases classified elsewhere (disorder)
Other primary cardiomyopathy NOS
SNOMEDCT:195037005
A disease of the heart muscle or myocardium proper. Cardiomyopathies may be classified as either primary or secondary, on the basis of etiology, or on the pathophysiology of the lesion: hypertrophic, dilated, or restrictive.[accessedResource: NCIt:C34830][accessDate: 04-11-2010]
Myocardial disease
Myocardial disease (disorder)[accessedResource: SNOMEDCT:57809008][accessDate: 04-11-2010]
[X]Cardiomyopathy in other diseases classified elsewhere[accessedResource: SNOMEDCT:195580005][accessDate: 04-11-2010]
Myocardiopathy[accessedResource: SNOMEDCT:85898001][accessDate: 04-11-2010]
NCIt:C35544
PRIM CARDIOMYOPATHY NEC
Cardiomyopathy in other diseases classified elsewhere
Myocardial Disorder[accessedResource: NCIt:C35544][accessDate: 04-11-2010]
ICD9:425.4
Cardiomyopathy, NOS
ICD9:425
extrinsic cardiomyopathy[accessedResource: DOID:3978][accessDate: 04-11-2010]
Other primary cardiomyopathy NOS (disorder)[accessedResource: SNOMEDCT:195022006][accessDate: 04-11-2010]
SNOMEDCT:85898001
SNOMEDCT:195580005
Disorder of heart muscle[accessedResource: SNOMEDCT:57809008][accessDate: 04-11-2010]
PRIM CARDIOMYOPATHY NEC[accessedResource: ICD9:425.4][accessDate: 04-11-2010]
Other primary cardiomyopathies[accessedResource: SNOMEDCT:195017006][accessDate: 04-11-2010]
extrinsic cardiomyopathy
[X]Cardiomyopathy in other diseases classified elsewhere (disorder)[accessedResource: SNOMEDCT:195580005][accessDate: 04-11-2010]
Disorder of heart muscle
Myocardiopathy, NOS
Other primary cardiomyopathy NOS[accessedResource: SNOMEDCT:195022006][accessDate: 04-11-2010]
Myocardial Disorder
NCIt:C34830
Disorder of myocardium
SNOMEDCT:57809008
Cardiomyopathy in other diseases classified elsewhere[accessedResource: ICD9:425.8][accessDate: 04-11-2010]
DOID:3978
cardiomyopathy
CARDIOMYOPATH IN OTH DIS
Cardiomyopathy NOS[accessedResource: SNOMEDCT:195037005][accessDate: 04-11-2010]
Other primary cardiomyopathies
Myocardial disease, NOS
Cardiomyopathy NOS (disorder)[accessedResource: SNOMEDCT:195037005][accessDate: 04-11-2010]
SNOMEDCT:195017006
Myocardial disease, NOS[accessedResource: SNOMEDCT:57809008][accessDate: 04-11-2010]
Myocardiopathy
Myocardial disease (disorder)
Cardiomyopathy (disorder)[accessedResource: SNOMEDCT:85898001][accessDate: 04-11-2010]
Myocardial disease[accessedResource: SNOMEDCT:57809008][accessDate: 04-11-2010]
Cardiomyopathy (disorder)
James Malone
CS57616 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158640&type=germplasm
CS57616
http://www.arabidopsis.org/servlets/TairObject?id=1005158640&type=germplasm
erythroblastoid cell line
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#biological_replicate[accessedResource: MO_952][accessDate: 04-11-2010]
James Malone
A biological replicate is a replicate role that consists of independent biological replicates made from different individual BioSources.
biological replicate
MO_952
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#biological_replicate
Ele Holloway
Lu135
JCRB0170
James Malone
Lu-135
Ele Holloway
James Malone
SNU475
Ele Holloway
James Malone
SHEP-SF
Limb[accessedResource: FMAID:7182][accessDate: 04-11-2010]
MAT:0000090
limb
Cardinal body part, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with a complete set of bones of the appendicular skeleton, it is partially surrounded by skin of limb. Examples: There are only four instances, right upper and lower limbs and left upper and lower limbs.
EHDAA:1697
MA:0000007
vertebrata limb
James Malone
vertebrate limb
limb sensu vertebrata
XAO:0003027
EMAPA:16405
EV:0100483
Extremity[accessedResource: FMAID:7182][accessDate: 04-11-2010]
Extremity
limb sensu vertebrata[accessedResource: MAT:0000090][accessDate: 04-11-2010]
FMAID:7182
http://www.ebi.ac.uk/efo/EFO_0001699
A dervied temperature unit is a derived unit which represents a standard measurement of temperature in a particular temperature scale.
A derived unit which represents a standard measurement of temperature in a particular temperature scale.
James Malone
UO:0000126
derived temperature unit
true
Ele Holloway
82Pb
lead atom
InChIKey=WABPQHHGFIMREM-UHFFFAOYAT
James Malone
InChI=1/Pb
http://www.ebi.ac.uk/efo/EFO_0002412
Blei
plumbum
[Pb]
A carbon group element atom that has formula Pb.
A carbon group element that has formula Pb.
plomo
plomb
CHEBI:25016
lead
GeneRIF:15198927
GeneRIF:12692265
GeneRIF:16145471
GeneRIF:15217953
GeneRIF:14520461
GeneRIF:15665272
GeneRIF:12770739
Clear Cell Renal Cell Carcinoma
GeneRIF:15826766
GeneRIF:11840338
SNOMEDCT:41607009
GeneRIF:15375503
GeneRIF:12209956
Clear cell carcinoma of kidney (disorder)
Hypernephromas[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:15358199
GeneRIF:15809750
Renal Cell Carcinoma, Stage Unspecified[accessedResource: NCIt:C9385][accessDate: 04-11-2010]
GeneRIF:15791570
NCIt:C9385
GeneRIF:12594819
Adenocarcinoma of the Kidney[accessedResource: NCIt:C9385][accessDate: 04-11-2010]
GeneRIF:11712081
GeneRIF:14517280
GeneRIF:15906349
Carcinomas, Renal Cell
Carcinoma of kidney
GeneRIF:15086915
Sarcomatoid Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:15671550
GeneRIF:16157291
GeneRIF:15448019
GeneRIF:15893810
GeneRIF:16254461
GeneRIF:12963978
GeneRIF:12025227
GeneRIF:15273700
GeneRIF:12970754
GeneRIF:11759057
SNOMEDCT:188251003
GeneRIF:14981908
GeneRIF:12781449
GeneRIF:14612902
Carcinoma, Collecting Duct (Kidney)
Carcinomas, Collecting Duct (Kidney)[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:15319295
GeneRIF:15930277
Adenocarcinoma, Renal Cell
Grawitz tumour
GeneRIF:12697836
GeneRIF:15285879
Chromophobe Renal Cell Carcinoma
Hypernephroma[accessedResource: SNOMEDCT:41607009][accessDate: 04-11-2010]
GeneRIF:14696115
GeneRIF:12646256
GeneRIF:16237213
GeneRIF:16244585
Renal Cell Cancer[accessedResource: NCIt:C9385][accessDate: 04-11-2010]
SNOMEDCT:254915003
GeneRIF:12452054
GeneRIF:12375029
Adenocarcinoma of Kidney
GeneRIF:11865300
GeneRIF:16213477
GeneRIF:12707035
GeneRIF:12496484
GeneRIF:12766581
Hypernephromas
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.
GeneRIF:12695553
GeneRIF:12708469
Adenocarcinomas, Renal Cell
Kidney Adenocarcinoma
GeneRIF:14648699
GeneRIF:12207901
GeneRIF:15086466
Nephroid Carcinoma
Nephroid Carcinomas
Clear cell carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 04-11-2010]
GeneRIF:14666709
Clear Cell Renal Carcinoma
GeneRIF:12208877
GeneRIF:16061872
GeneRIF:15274119
GeneRIF:11714447
GeneRIF:14693268
Renal Cell Carcinoma, Stage Unspecified
Papillary Renal Cell Carcinoma
GeneRIF:14712483
renal cell cancer
GeneRIF:15900605
Kidney Adenocarcinoma[accessedResource: NCIt:C9385][accessDate: 04-11-2010]
Hypernephroma
Chromophobe Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:16164647
Hypernephroid Carcinomas
GeneRIF:15709180
GeneRIF:11920465
Clear Cell Renal Carcinoma[accessedResource: MSH:D002292][accessDate: 04-11-2010]
Duct Carcinoma, Collecting (Kidney)[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:14559244
GeneRIF:15502805
renal cell carcinoma
Renal cell carcinoma - morphology
Grawitz Tumor
GeneRIF:15578072
GeneRIF:15998523
Nephroid Carcinomas[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:12684625
GeneRIF:12496483
GeneRIF:15365652
Clear cell carcinoma of kidney
Renal cell carcinoma - morphology[accessedResource: SNOMEDCT:41607009][accessDate: 04-11-2010]
GeneRIF:15701841
GeneRIF:12893366
GeneRIF:16015044
A carcinoma arising from the renal parenchyma. The incidence of renal cell carcinoma has increased by 35% from 1973 to 1991. There is a strong correlation between cigarette smoking and the development of renal cell carcinoma. The clinical presentation includes : hematuria, flank pain and a palpable lumbar mass. A high percentage of renal cell carcinomas are diagnosed when an ultrasound is performed for other purposes. Diagnostic procedures include: ultra sound, intravenous pyelography and computed tomography (CT). Radical nephrectomy is the standard intervention procedure. Renal cell carcinoma is generally considered to be resistant to radiation treatment and chemotherapy.
GeneRIF:12597245
MSH:D002292
Carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 04-11-2010]
GeneRIF:14676131
Renal cell carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:41607009][accessDate: 04-11-2010]
GeneRIF:12736050
Hypernephroma (disorder)
hypernephroma (disorder)[accessedResource: DOID:4450][accessDate: 04-11-2010]
GeneRIF:14519627
GeneRIF:14663360
Clear cell carcinoma of kidney (disorder)[accessedResource: SNOMEDCT:254915003][accessDate: 04-11-2010]
GeneRIF:16221209
GeneRIF:12036906
GeneRIF:16077991
Renal Cell Carcinomas[accessedResource: MSH:D002292][accessDate: 04-11-2010]
Renal cell carcinoma (morphologic abnormality)
Adenocarcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:12750296
GeneRIF:11896565
Adenocarcinoma of the Kidney
GeneRIF:11921283
James Malone
GeneRIF:11597145
Carcinomas, Hypernephroid[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:14534724
GeneRIF:12640117
Carcinoma, Hypernephroid[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:15145526
GeneRIF:12874014
GeneRIF:12402975
GeneRIF:12845675
GeneRIF:15780567
GeneRIF:12016154
Renal Cell Adenocarcinomas[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:12584564
DOID:4450
GeneRIF:12115583
GeneRIF:12209602
GeneRIF:15608669
Sarcomatoid Renal Cell Carcinoma
GeneRIF:15350301
GeneRIF:15985433
Papillary Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 04-11-2010]
Adenocarcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 04-11-2010]
RCC
GeneRIF:14565870
GeneRIF:15107966
GeneRIF:15102668
GeneRIF:11721640
GeneRIF:15245963
Nephroid Carcinoma[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:15747097
Clear Cell Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 04-11-2010]
RCC[accessedResource: NCIt:C9385][accessDate: 04-11-2010]
Hypernephroid Carcinoma
GeneRIF:15247770
GeneRIF:15300849
GeneRIF:15945081
GeneRIF:16210641
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.[accessedResource: MSH:D002292][accessDate: 04-11-2010]
GeneRIF:12474536
GeneRIF:11749694
GeneRIF:15867365
GeneRIF:14559790
GeneRIF:15569051
Grawitz tumor[accessedResource: SNOMEDCT:254915003][accessDate: 04-11-2010]
A carcinoma arising from the renal parenchyma. The incidence of renal cell carcinoma has increased by 35% from 1973 to 1991. There is a strong correlation between cigarette smoking and the development of renal cell carcinoma. The clinical presentation includes : hematuria, flank pain and a palpable lumbar mass. A high percentage of renal cell carcinomas are diagnosed when an ultrasound is performed for other purposes. Diagnostic procedures include: ultra sound, intravenous pyelography and computed tomography (CT). Radical nephrectomy is the standard intervention procedure. Renal cell carcinoma is generally considered to be resistant to radiation treatment and chemotherapy.[accessedResource: NCIt:C9385][accessDate: 04-11-2010]
GeneRIF:15661050
Grawitz tumour[accessedResource: SNOMEDCT:41607009][accessDate: 04-11-2010]
Duct Carcinomas, Collecting (Kidney)
GeneRIF:12631591
Tomasz Adamusiak
ILSXISS80/TejJ
http://jaxmice.jax.org/strain/009316.html
STRUCTURE_ChemicalName_IUPAC:(5E)-5-[(3aS,5R,6aS)-5-hydroxy-4-[(1E,3S)-3-hydroxy-4-methyloct-1-en-6-yn-1-yl]hexahydropentalen-2(1H)-ylidene]pentanoic acid
CASRN:78919-13-8
James Malone
DSSTox_Generic_SID:41046
iloprost
Tomasz Adamusiak
STRUCTURE_Formula:C22H32O4
DSSTox_CID:21046
Ele Holloway
Ele Holloway
James Malone
Panc89
T3M4
benzo(a)pyrene
139
20139
50-32-8
C20H12
benzo[pqr]tetraphene
BaP
The fused compact cephalic plates that comprise the head, excluding the eyes, antennae and mouthparts.[accessedResource: FBbt:00004482][accessDate: 04-11-2010]
James Malone
The fused compact cephalic plates that comprise the head, excluding the eyes, antennae and mouthparts.
head capsule
FBbt:00004482
Neuroendocrine cells are cells that receive neuronal input (neurotransmitters released by nerve cells) and, as a consequence of this input, release message molecules (hormones) to the blood. In this way they bring about and integration between the nervous system and the endocrine system, a process known as neuroendocrine integration. An example of a neuroendocrine cell is the cell of the adrenal medulla (innermost part of the adrenal gland) which releases adrenalin to the blood. The adrenal medullary cells are controlled by the sympathetic division of the autonomic nervous system. These cells are modified postganglionic neurons. Autonomic nerve fibers lead directly to them from the central nervous system. The major center of neuroendocrine integration in the body is found in the hypothalamus and the pituitary gland. Here hypothalamic neurosecretory cells release factors to the blood. Some of these these factors, release at the median eminence, control the secretion of pituitary hormones, while others (the hormones oxytocin and vasopressin) are released directly to the peripheral circulation.
A neuron that has the specialized function to produce and secrete hormones, and that constitutes, in whole or in part, an endocrine organ or system.[accessedResource: CL:0000165][accessDate: 04-11-2010]
A neuron that has the specialized function to produce and secrete hormones, and that constitutes, in whole or in part, an endocrine organ or system.
neurosecretory cell[accessedResource: CL:0000165][accessDate: 04-11-2010]
neurosecretory cell
CL:0000165
Tomasz Adamusiak
BTO:0002691
neuroendocrine cell
Neuroendocrine cells are cells that receive neuronal input (neurotransmitters released by nerve cells) and, as a consequence of this input, release message molecules (hormones) to the blood. In this way they bring about and integration between the nervous system and the endocrine system, a process known as neuroendocrine integration. An example of a neuroendocrine cell is the cell of the adrenal medulla (innermost part of the adrenal gland) which releases adrenalin to the blood. The adrenal medullary cells are controlled by the sympathetic division of the autonomic nervous system. These cells are modified postganglionic neurons. Autonomic nerve fibers lead directly to them from the central nervous system. The major center of neuroendocrine integration in the body is found in the hypothalamus and the pituitary gland. Here hypothalamic neurosecretory cells release factors to the blood. Some of these these factors, release at the median eminence, control the secretion of pituitary hormones, while others (the hormones oxytocin and vasopressin) are released directly to the peripheral circulation.[accessedResource: BTO:0002691][accessDate: 04-11-2010]
Tomasz Adamusiak
ILSXISS48/TejJ
http://jaxmice.jax.org/strain/009270.html
A neuron that uses GABA as a vesicular neurotransmitter[accessedResource: CL:0000617][accessDate: 04-11-2010]
GABA-ergic neuron[accessedResource: CL:0000617][accessDate: 04-11-2010]
James Malone
A neuron that uses GABA as a vesicular neurotransmitter
GABAergic neuron
CL:0000617
GABA-ergic neuron
FBbt:00017015
P1 ViMus[accessedResource: FBbt:00017015][accessDate: 04-11-2010]
circular visceral muscle primordium[accessedResource: FBbt:00017015][accessDate: 04-11-2010]
circular visceral muscle precursor[accessedResource: FBbt:00017015][accessDate: 04-11-2010]
Primordium of the circular visceral muscle of the trunk. Becomes distinct from the rest of the trunk mesoderm by stage 11 when two distinct layers of trunk mesoderm are apparent, the inner of which is the circular visceral muscle primordium. By stage 12, these cells form a palisade consisting of a dorsal row an a ventral row of tightly packed cells. These cells adhere to the anterior and posterior midgut rudiments as they extend. During dorsal closure they spread out to encircle the midgut.[accessedResource: FBbt:00017015][accessDate: 04-11-2010]
Primordium of the circular visceral muscle of the trunk. Becomes distinct from the rest of the trunk mesoderm by stage 11 when 2 distinct layers of trunk mesoderm are apparent, the inner of which is the circular visceral muscle primordium. By stage 12, these cells form a palisade consisting of a dorsal row an a ventral row of tightly packed cells. These cells adhere to the anterior and posterior midgut rudiments as they extend. During dorsal closure they spread out to encircle the midgut.
Primordium of the circular visceral muscle of the trunk. Becomes distinct from the rest of the trunk mesoderm by stage 11 when two distinct layers of trunk mesoderm are apparent, the inner of which is the circular visceral muscle primordium. By stage 12, these cells form a palisade consisting of a dorsal row an a ventral row of tightly packed cells. These cells adhere to the anterior and posterior midgut rudiments as they extend. During dorsal closure they spread out to encircle the midgut.
splanchopleura
James Malone
circular visceral muscle precursor
splanchopleura[accessedResource: FBbt:00017015][accessDate: 04-11-2010]
circular visceral muscle primordium
circular visceral mesoderm primordium
P1 ViMus
Tomasz Adamusiak
slow muscle cell somite 14
ZFA:0000841
James Malone
embryonic central brain pars intercerebralis
FBbt:00005667
Jie Zheng
Tomasz Adamusiak
carotid artery endothelium
James Malone
HT1197
Ele Holloway
HT-1197
Tumor of the Germ Cell[accessedResource: NCIt:C3708][accessDate: 04-11-2010]
Germ Cell and Embryonal Neoplasms[accessedResource: MSH:D009373][accessDate: 04-11-2010]
Germinoma (morphologic abnormality)
GeneRIF:12777997
[M]Germ cell neoplasms (morphologic abnormality)
GERM CELL EMBRYONIC NEOPL[accessedResource: MSH:D009373][accessDate: 04-11-2010]
Cancers, Embryonal[accessedResource: MSH:D009373][accessDate: 04-11-2010]
Neoplasms, Germ Cell and Embryonic
Neoplasms composed of primordial GERM CELLS of embryonic GONADS or of elements of the germ layers of the EMBRYO, MAMMALIAN. The concept does not refer to neoplasms located in the gonads or present in an embryo or FETUS.[accessedResource: MSH:D009373][accessDate: 04-11-2010]
[M]Germ cell neoplasm NOS (morphologic abnormality)
Germ cell neoplasm
James Malone
Neoplasms, Germ Cell and Embryonic[accessedResource: MSH:D009373][accessDate: 04-11-2010]
GeneRIF:15896468
Germ cell tumor (disorder)
Neoplasm of the Germ Cell[accessedResource: NCIt:C3708][accessDate: 04-11-2010]
[M]Germ cell neoplasms (morphologic abnormality)[accessedResource: SNOMEDCT:189839002][accessDate: 04-11-2010]
GeneRIF:12620992
A cancer that is derived_from germ cells.
GeneRIF:15330164
germ cell tumor
[M]Germ cell neoplasm NOS
Germ cell neoplasms (morphologic abnormality)
Tumor of Germ Cell[accessedResource: NCIt:C3708][accessDate: 04-11-2010]
germinoma[accessedResource: DOID:2994][accessDate: 04-11-2010]
Germ cell tumor, NOS[accessedResource: SNOMEDCT:28307001][accessDate: 04-11-2010]
NEOPL GERM CELL EMBRYONAL[accessedResource: MSH:D009373][accessDate: 04-11-2010]
GeneRIF:12824871
Germ Cell Neoplasm[accessedResource: NCIt:C3708][accessDate: 04-11-2010]
GeneRIF:15467433
Tumors, Germ Cell
[M]Germ cell neoplasms
SNOMEDCT:28307001
Cancers, Germ Cell
GeneRIF:15691383
Germ cell tumour
Cancer, Germ Cell[accessedResource: MSH:D009373][accessDate: 04-11-2010]
GeneRIF:16188233
Neoplasm, Embryonal
Neoplasm of the Germ Cell
[M]Germ cell neoplasms[accessedResource: SNOMEDCT:189839002][accessDate: 04-11-2010]
malignant tumor of the germ cell
Cancer, Embryonal and Mixed
GeneRIF:12727846
GERM CELL EMBRYONIC NEOPL
Germinoma (morphologic abnormality)[accessedResource: SNOMEDCT:28307001][accessDate: 04-11-2010]
SNOMEDCT:189839002
NEOPL GERM CELL EMBRYONAL
SNOMEDCT:115233005
Embryonal Neoplasms
Germ Cell Tumors[accessedResource: MSH:D009373][accessDate: 04-11-2010]
GeneRIF:14555521
Tumor of Germ Cell
GERM CELL NEOPL[accessedResource: MSH:D009373][accessDate: 04-11-2010]
Neoplasms, Embryonal and Mixed[accessedResource: MSH:D009373][accessDate: 04-11-2010]
Neoplasm of Germ Cell
Neoplasms composed of primordial GERM CELLS of embryonic GONADS or of elements of the germ layers of the EMBRYO, MAMMALIAN. The concept does not refer to neoplasms located in the gonads or present in an embryo or FETUS.
DOID:2994
Embryonal Neoplasms[accessedResource: MSH:D009373][accessDate: 04-11-2010]
GeneRIF:12163388
SNOMEDCT:402878003
MSH:D009373
Embryonal Neoplasm[accessedResource: MSH:D009373][accessDate: 04-11-2010]
malignant tumor of the germ cell[accessedResource: DOID:2994][accessDate: 04-11-2010]
Neoplasm of Germ Cell[accessedResource: NCIt:C3708][accessDate: 04-11-2010]
Germ Cell Neoplasms
Embryonal Cancer[accessedResource: MSH:D009373][accessDate: 04-11-2010]
Germ cell neoplasm (morphologic abnormality)
SNOMEDCT:189854008
GeneRIF:15982323
Germ cell neoplasm NOS (morphologic abnormality)
Tumor of the Germ Cell
Germ Cell Neoplasms[accessedResource: MSH:D009373][accessDate: 04-11-2010]
NCIt:C3708
Cancer, Embryonal and Mixed[accessedResource: MSH:D009373][accessDate: 04-11-2010]
Neoplasms, Embryonal and Mixed
GeneRIF:12736724
Embryonal Cancers
Germ cell tumor, NOS
germ cell neoplasm NOS (morphologic abnormality)[accessedResource: DOID:2994][accessDate: 04-11-2010]
Cancer, Embryonal
NEOPL GERM CELL
GeneRIF:12629412
NEOPL EMBRYONAL
GeneRIF:14633588
Neoplasms, Germ Cell and Embryonal
Germinoma
GeneRIF:15491742
Germ cell tumor (disorder)[accessedResource: SNOMEDCT:402878003][accessDate: 04-11-2010]
germ cell neoplasm (morphologic abnormality)[accessedResource: DOID:2994][accessDate: 04-11-2010]
A cancer that is derived_from germ cells.[accessedResource: DOID:2994][accessDate: 04-11-2010]
[M]Germ cell neoplasm NOS[accessedResource: SNOMEDCT:189854008][accessDate: 04-11-2010]
[M]Germ cell neoplasm NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189854008][accessDate: 04-11-2010]
Germ cell tumour[accessedResource: SNOMEDCT:402878003][accessDate: 04-11-2010]
NEOPL EMBRYONAL[accessedResource: MSH:D009373][accessDate: 04-11-2010]
Cancer, Germ Cell
Germ Cell Cancers[accessedResource: MSH:D009373][accessDate: 04-11-2010]
An assay in which -sequencing technology (e.g. Solexa/454) is used to determine NDNA sequence
DNA sequencing
ArrayExpress Production Team
DNA-seq
Lymphomas, Malignant[accessedResource: MSH:D008223][accessDate: 04-11-2010]
Germinoblastoma[accessedResource: MSH:D008223][accessDate: 04-11-2010]
GeneRIF:14724650
DOID:353
Malignant lymphoma (disorder)[accessedResource: SNOMEDCT:118600007][accessDate: 04-11-2010]
Reticulolymphosarcoma NOS[accessedResource: DOID:353][accessDate: 04-11-2010]
GeneRIF:16194892
Lymphomas[accessedResource: MSH:D008223][accessDate: 04-11-2010]
GeneRIF:15940251
Reticulolymphosarcoma[accessedResource: MSH:D008223][accessDate: 04-11-2010]
Germinoblastic Sarcoma[accessedResource: MSH:D008223][accessDate: 04-11-2010]
GeneRIF:12532332
GeneRIF:15735694
GeneRIF:11720250
GeneRIF:15692060
GeneRIF:12884297
Germinoblastomas
GeneRIF:15649253
GeneRIF:15985538
GeneRIF:15226424
Reticulolymphosarcomas[accessedResource: MSH:D008223][accessDate: 04-11-2010]
GeneRIF:15705798
GeneRIF:12539045
malignant lymphoma (disorder)
GeneRIF:15902285
GeneRIF:12149433
Germinoblastic Sarcoma
GeneRIF:14612522
GeneRIF:15716988
Malignant lymphoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:21964009][accessDate: 04-11-2010]
Lymphoma (Non-Hodgkin)
Germinoblastomas[accessedResource: MSH:D008223][accessDate: 04-11-2010]
Lymphomas, Malignant
GeneRIF:15762053
Malignant lymphoma, no ICD-O subtype[accessedResource: SNOMEDCT:21964009][accessDate: 04-11-2010]
Malignant lymphoma NOS of unspecified site
GeneRIF:15263076
Lymphoma, NOS
Malignant lymphoma (clinical)
GeneRIF:12469325
Microglioma [obs][accessedResource: SNOMEDCT:21964009][accessDate: 04-11-2010]
GeneRIF:15325703
GeneRIF:11999550
Sarcomas, Germinoblastic
Lymphoma (clinical)
GeneRIF:12082638
This is potentially too broad as well as overlaps with leukemia and should be obsoleted.
GeneRIF:14998493
GeneRIF:11869933
GeneRIF:12145697
GeneRIF:12048235
Reticulolymphosarcomas
GeneRIF:15640350
GeneRIF:15713979
Malignant lymphoma NOS of unspecified site[accessedResource: SNOMEDCT:188695001][accessDate: 04-11-2010]
GeneRIF:15744340
GeneRIF:12438221
GeneRIF:11920179
GeneRIF:14767575
GeneRIF:15126346
GeneRIF:11866986
SNOMEDCT:188695001
GeneRIF:15467748
Malignant lymphoma NOS of unspecified site (disorder)
GeneRIF:12579309
GeneRIF:12496417
GeneRIF:11937265
Lymphoma (Hodgkin's and Non-Hodgkin's)[accessedResource: DOID:353][accessDate: 04-11-2010]
GeneRIF:15516976
A general term for various neoplastic diseases of the lymphoid tissue.
GeneRIF:15562971
GeneRIF:12569164
SNOMEDCT:188694002
Reticulolymphosarcoma NOS
Malignant lymphoma (clinical)[accessedResource: SNOMEDCT:118600007][accessDate: 04-11-2010]
malignant lymphoma NOS (disorder)
GeneRIF:12208847
MSH:D008223
GeneRIF:12555065
GeneRIF:16201318
GeneRIF:15474489
GeneRIF:14702288
Malignant lymphoma NOS[accessedResource: SNOMEDCT:188694002][accessDate: 04-11-2010]
GeneRIF:12217802
malignant lymphoma NOS
Germinoblastic Sarcomas[accessedResource: MSH:D008223][accessDate: 04-11-2010]
GeneRIF:12682649
Germinoblastoma
James Malone
GeneRIF:12967477
GeneRIF:11932403
Reticulolymphosarcoma
GeneRIF:11751994
GeneRIF:14662861
Lymphomas
GeneRIF:15522957
GeneRIF:12351407
Microglioma [obs]
Lymphoma, Malignant
Lymphoma (Hodgkin's and Non-Hodgkin's)
A malignant (clonal) proliferation of B- lymphocytes or T- lymphocytes which involves the lymph nodes, bone marrow and/or extranodal sites. This category includes Non-Hodgkin lymphomas and Hodgkin lymphomas.
GeneRIF:12393693
GeneRIF:14691303
Malignant lymphoma, no ICD-O subtype (morphologic abnormality)
GeneRIF:11985791
GeneRIF:15569983
GeneRIF:15215324
GeneRIF:12688322
GeneRIF:14654791
GeneRIF:12218099
A general term for various neoplastic diseases of the lymphoid tissue.[accessedResource: MSH:D008223][accessDate: 04-11-2010]
A malignant (clonal) proliferation of B- lymphocytes or T- lymphocytes which involves the lymph nodes, bone marrow and/or extranodal sites. This category includes Non-Hodgkin lymphomas and Hodgkin lymphomas.[accessedResource: NCIt:C3208][accessDate: 04-11-2010]
A cancer that affects lymphocytes that reside in the lymphatic system and in blood-forming organs.[accessedResource: DOID:353][accessDate: 04-11-2010]
GeneRIF:15889157
GeneRIF:15121848
GeneRIF:16277027
Malignant lymphoma NOS (disorder)[accessedResource: SNOMEDCT:188694002][accessDate: 04-11-2010]
lymphoma
GeneRIF:16108830
GeneRIF:15356104
malignant lymphoma NOS of unspecified site (disorder)[accessedResource: DOID:353][accessDate: 04-11-2010]
Malignant lymphoma, no ICD-O subtype
GeneRIF:15551285
GeneRIF:12604405
GeneRIF:12567186
GeneRIF:11836626
GeneRIF:15223017
GeneRIF:14666612
SNOMEDCT:21964009
GeneRIF:12532453
NCIt:C3208
GeneRIF:15133473
Lymphoma (Hodgkin and Non-Hodgkin)[accessedResource: NCIt:C3208][accessDate: 04-11-2010]
GeneRIF:12549480
GeneRIF:12807718
Lymphoma, NOS[accessedResource: SNOMEDCT:21964009][accessDate: 04-11-2010]
GeneRIF:12897143
GeneRIF:15743832
GeneRIF:12721791
GeneRIF:15890690
GeneRIF:12915884
GeneRIF:15677569
Lymphoma (Hodgkin and Non-Hodgkin)
Lymphoma (clinical)[accessedResource: SNOMEDCT:118600007][accessDate: 04-11-2010]
GeneRIF:15160902
GeneRIF:15668399
A cancer that affects lymphocytes that reside in the lymphatic system and in blood-forming organs.
Malignant lymphoma[accessedResource: SNOMEDCT:118600007][accessDate: 04-11-2010]
GeneRIF:15265020
SNOMEDCT:118600007
Tomasz Adamusiak
lens placode
ZFA:0000122
Ele Holloway
James Malone
NCI-H1694
Tomasz Adamusiak
PMID:18564034
H1
Tomasz Adamusiak
trigeminal neural crest
ZFA:0000080
MDAMB-157
MDAMB157
James Malone
amikacin
37517-28-5
Tomasz Adamusiak
quadrate
ZFA:0000621
An assay in which the transcriptome of a biological sample is analysed using a tiling path array.
transcription profiling by tiling array
Ele Holloway
James Malone
A375
Ele Holloway
James Malone
HEL9217
Ele Holloway
James Malone
WM793-P2N1
Ele Holloway
James Malone
67NR
Restrictive cardiomyopathy (disorder)[accessedResource: DOID:397][accessDate: 04-11-2010]
Cardiomyopathy, constrictive[accessedResource: DOID:397][accessDate: 04-11-2010]
DOID:397
A type of heart disorder referring to the inability of the ventricles to fill with blood because the myocardium (heart muscle) stiffens and looses its flexibility. Causes include replacement of the myocardium with scar tissue, abnormal cellular infiltration of the myocardium, or deposition of a substance (e.g., amyloid) in the myocardium.[accessedResource: NCIt:C62798][accessDate: 04-11-2010]
Cardiomyopathy, constrictive
primary restrictive cardiomyopathy (disorder)
restrictive cardiomyopathy
NCIt:C62798
Tomasz Adamusiak
A type of heart disorder referring to the inability of the ventricles to fill with blood because the myocardium (heart muscle) stiffens and looses its flexibility. Causes include replacement of the myocardium with scar tissue, abnormal cellular infiltration of the myocardium, or deposition of a substance (e.g., amyloid) in the myocardium.
Restrictive cardiomyopathy (disorder)
primary restrictive cardiomyopathy (disorder)[accessedResource: DOID:397][accessDate: 04-11-2010]
Tomasz Adamusiak
head visceral muscle primordium
FBbt:00007049
metoprolol
1-[(1-methylethyl)amino]-3-({4-[2-(methyloxy)ethyl]phenyl}oxy)propan-2-ol
23309
3309
51384-51-1
C15H25NO3
Ele Holloway
James Malone
EM2
EM-2
James Malone
HT-29
1-(o-Chloro-alpha,alpha-diphenylbenzyl)imidazole
James Malone
1-(alpha-(2-Chlorophenyl)benzhydryl)imidazole
1-[(2-chlorophenyl)(diphenyl)methyl]-1H-imidazole
An imidazole that has formula C22H17ClN2.
Clc1ccccc1C(c1ccccc1)(c1ccccc1)n1ccnc1
InChI=1/C22H17ClN2/c23-21-14-8-7-13-20(21)22(25-16-15-24-17-25,18-9-3-1-4-10-18)19-11-5-2-6-12-19/h1-17H
1-((2-Chlorophenyl)diphenylmethyl)-1H-imidazole
clotrimazole
1-(o-Chlorotrityl)imidazole
C22H17ClN2
Mycelex (TN)
Lotrimin (TN)
InChIKey=VNFPBHJOKIVQEB-UHFFFAOYAO
http://www.ebi.ac.uk/efo/EFO_0001509
CHEBI:3764
James Malone
Pectobacterium carotovorum infection
NCI Metathesaurus: C0085485
Erwinia carotovora infection
Tomasz Adamusiak
basal plate midbrain region
ZFA:0000761
Helen Parkinson
Mus musculus subspecies
clofibric acid
2-(p-Chlorophenoxy)isobutyric acid
acide clofibrique
2-(4-chlorophenoxy)-2-methylpropanoic acid
CPIB
alpha-(p-chlorophenoxy)isobutyric acid
C10H11ClO3
CHEBI:34648
CC(C)(Oc1ccc(Cl)cc1)C(O)=O
Clofibrinsaeure
Ele Holloway
Chlorofibrinic acid
PCIB
InChIKey=TXCGAZHTZHNUAI-XWKXFZRBCH
Chlorfibrinic acid
Clofibrate free acid
4-CPIB
2-(p-Chlorophenoxy)-2-methylpropionic acid
2-(4-Chlorophenoxy)-2-methylpropionic acid
InChI=1/C10H11ClO3/c1-10(2,9(12)13)14-8-5-3-7(11)4-6-8/h3-6H,1-2H3,(H,12,13)/f/h12H
acido clofibrico
Chlorophibrinic acid
PCPIB
James Malone
alpha-(4-chlorophenoxy)-alpha-methylpropionic acid
http://www.ebi.ac.uk/efo/EFO_0002405
Acide (p-chlorophenoxy)-2 methyl-2 propionique
acidum clofibricum
Lobular organ the parenchyma of which has as its parts glandular acini which are continuous with the prostatic part of the urethra. Examples: There is only one prostate.
MAT:0000078
A firm partly muscular partly glandular body that is situated about the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid.
FMAID:9600
EMAPA:19287
BTO:0001129
prostate
A firm partly muscular partly glandular body that is situated about the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid.[accessedResource: BTO:0001129][accessDate: 04-11-2010]
prostate gland
prostate gland[accessedResource: BTO:0001129][accessDate: 04-11-2010]
SAEL:87
EV:0100104
MA:0000404
James Malone
Ele Holloway
Tomasz Adamusiak
metastatic melanoma
DOID:4358
Tomasz Adamusiak
supraorbital lateral line neuromast
ZFA:0001026
skeleton[accessedResource: MAT:0000032][accessDate: 04-11-2010]
skeletal system
Set of all bones
Set of bones in the entire body.
EMAPA:17213
skeleton
MA:0000018
Set of all bones[accessedResource: FMAID:23875][accessDate: 04-11-2010]
Skeleton (in vivo)
Skeleton (in vivo)[accessedResource: FMAID:23875][accessDate: 04-11-2010]
Set of bones of body[accessedResource: FMAID:23875][accessDate: 04-11-2010]
FMAID:23875
EHDAA:5047
Anatomical system consisting of multiple elements and tissues that provides physical support.[accessedResource: TAO:0000434][accessDate: 04-11-2010]
ZFA:0000434
skeleton structure
Anatomical system consisting of multiple elements and tissues that provides physical support.
Set of bones of body
TAO:0000434
skeletal system[accessedResource: MAT:0000032][accessDate: 04-11-2010]
skeleton component
skeleton component[accessedResource: MAT:0000032][accessDate: 04-11-2010]
James Malone
MAT:0000032
A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.[accessedResource: CL:0000034][accessDate: 04-11-2010]
James Malone
A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.
stem cell
CL:0000034
Tomasz Adamusiak
primordial midbrain channel
ZFA:0005017
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#family_history_design[accessedResource: MO_544][accessDate: 04-11-2010]
Tomasz Adamusiak
family history design
MO_544
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#family_history_design
James Malone
HCC1359
James Malone
HCC1428
disorder of head (disorder)[accessedResource: DOID:4149][accessDate: 04-11-2010]
head disease
James Malone
The name of the pathology diagnosed in the organism from which the biomaterial was derived. The disease state is normal if no disease has been diagnosed. E.g Acute Lymphocytic Leukemia
DOID:4149
disorder of head (disorder)
James Malone
pharyngula prim-25
ZFS:0000031
James Malone
CS8581 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=4473197&type=germplasm
CS8581
http://www.arabidopsis.org/servlets/TairObject?id=4473197&type=germplasm
James Malone
An anatomical modifier is a quality which inheres in an organism part.
anatomical modifier
MAT:0000476
Tomasz Adamusiak
ventral epidermis primordium
FBbt:00005533
neuroblastoma cell line differentiated w/ retinoic acid
SK-N-SH_RA
Ele Holloway
James Malone
MIA Paca-2
blood component
Ele Holloway
James Malone
NCI-H69
Tomasz Adamusiak
pectoral fin skeleton
ZFA:0000943
Venous subtree[accessedResource: FMAID:50723][accessDate: 04-11-2010]
EMAPA:16240
Any of the tubular branching vessels that carry blood from the capillaries toward the heart.[accessedResource: BTO:0000234][accessDate: 04-11-2010]
TAO:0000082
BTO:0000234
Venous vessel
EHDAA:486
ZFA:0000082
Vessels that carry blood to the heart.[accessedResource: ZFA:0000082][accessDate: 04-11-2010]
EV:0100031
MA:0000066
XAO:0000115
MAT:0000037
Venous vessel[accessedResource: FMAID:50723][accessDate: 04-11-2010]
James Malone
Subdivision of venous tree (organ) which consists of branching sets of tubes (venous trunks) that form a tree; together with other venous trees (organ part), it constitutes a venous tree (organ). Examples: subclavian venous tree, jugular tree, extrahepatic portal tree, common iliac venous tree.
vein
venous system
Venous subtree
Venous tree organ part
Vessels that carry blood to the heart.
FMAID:50723
venous system[accessedResource: MAT:0000037][accessDate: 04-11-2010]
Any of the tubular branching vessels that carry blood from the capillaries toward the heart.
Venous tree organ part[accessedResource: FMAID:50723][accessDate: 04-11-2010]
A cell of the outer layer of a blastula that gives rise to the ectoderm after gastrulation.[accessedResource: CL:0000352][accessDate: 04-11-2010]
James Malone
A cell of the outer layer of a blastula that gives rise to the ectoderm after gastrulation.
epiblast cell
CL:0000352
embryonic stem cell
epiblast stem cell
Atrium of Heart[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
Atria, Cardiac
atrial tissue[accessedResource: BTO:0000903][accessDate: 10-05-2010]
Atrium of Heart
In the heart, the atrium is an upper chamber found on both sides of the heart. The left atrium receives red, oxygenated blood from the lungs by way of the pulmonary veins. The right atrium receives dark red blood from the other parts of the body.
NCIt:C12728
Heart Atria
Atrium[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
Heart Atrium
1.4
obsolete_cardiac atrium
atrial chamber
Atria, Cardiac[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
cardiac atrium
Auricle of Heart
Auricle of Heart[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
atrial tissue
Heart Atrium[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
Heart Atria[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
The paired upper chambers of the heart. The left atrium receives oxygenated blood from the pulmonary vein and pumps blood into the left ventricle. The right atrium receives venous deoxygenated blood from the entire body via the superior and inferior vena cavae and pumps blood into the right ventricle.
BTO:0000903
James Malone
true
atrium
In the heart, the atrium is an upper chamber found on both sides of the heart. The left atrium receives red, oxygenated blood from the lungs by way of the pulmonary veins. The right atrium receives dark red blood from the other parts of the body.[accessedResource: BTO:0000903][accessDate: 10-05-2010]
Atria of Heart[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
The paired upper chambers of the heart. The left atrium receives oxygenated blood from the pulmonary vein and pumps blood into the left ventricle. The right atrium receives venous deoxygenated blood from the entire body via the superior and inferior vena cavae and pumps blood into the right ventricle.[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
Atria of Heart
Use atrium instead : EFO_0000277
Cardiac Atrium[accessedResource: NCIt:C12728][accessDate: 10-05-2010]
Ele Holloway
James Malone
SKMES1
James Malone
GM07022
MFO:0002300
ZFA:0000079
Communicating branch of phrenic nerve to internal thoracic plexus[accessedResource: FMAID:6200][accessDate: 04-11-2010]
telencephalon
Tomasz Adamusiak
XAO:0000012
The anterior and dorsal forebrain neuromere. In ray-finned fishes and most pronounced in teleosts the roof plate of the embryonic telencephalon extends laterally with the effect that the paired alar plates forming the hemispheric walls roll out lateroventrally in a process called eversion. This is unlike the development in other vertebrate groups. From Neuroanatomy of the Zebrafish Brain.[accessedResource: ZFA:0000079][accessDate: 04-11-2010]
The telencephalon is the name for a large region within the brain that is attributed many functions. Many people refer to it as the cerebrum; however, it is technically referred to as the telencephalon. As a more technical definition, the telencephalon refers to the cerebral hemispheres and other, smaller structures within the brain, although the telencephalon is one of the larger divisions (in terms of number). It is the anterior-most embryological division of the brain that develops from the prosencephalon. The telencephalon is composed of the following sub-regions; Limbic system; Cerebral cortex or cortices of the cerebral hemispheres, Basal ganglia, Olfactory bulb. The telencephalon comprises what most people think of as the "brain." It lies on top of the brainstem and is the largest and most well-developed of the five major divisions of the brain. The telencephalon is the newest structure in the phylogenetic sense, with mammals having the largest and most well-developed among all species. It emerges from the prosencephalon, the first of three vesicles that form from the embryonic neural tube (Christine Fennema-Notestine).
BTO:0000239
NIFSTD:birnlex_1115
An enlarged anterior or upper part of the brain; especially: the expanded anterior portion of the brain that in higher mammals overlies the rest of the brain, consists of cerebral hemispheres and connecting structures, and is considered to be the seat of conscious mental processes.
An enlarged anterior or upper part of the brain; especially: the expanded anterior portion of the brain that in higher mammals overlies the rest of the brain, consists of cerebral hemispheres and connecting structures, and is considered to be the seat of conscious mental processes.[accessedResource: BTO:0000239][accessDate: 04-11-2010]
The anterior and dorsal forebrain neuromere, includes the olfactory bulb. Kimmel et al, 1995.[accessedResource: TAO:0000079][accessDate: 04-11-2010]
James Malone
MA:0000183
TAO:0000079
The anterior and dorsal forebrain neuromere. In ray-finned fishes and most pronounced in teleosts the roof plate of the embryonic telencephalon extends laterally with the effect that the paired alar plates forming the hemispheric walls roll out lateroventrally in a process called eversion. This is unlike the development in other vertebrate groups. From Neuroanatomy of the Zebrafish Brain.
The anterior and dorsal forebrain neuromere, includes the olfactory bulb. Kimmel et al, 1995.
EMAPA:16910
Communicating branch of phrenic nerve to internal thoracic plexus
cerebrum[accessedResource: BTO:0000239][accessDate: 04-11-2010]
The telencephalon is the name for a large region within the brain that is attributed many functions. Many people refer to it as the cerebrum; however, it is technically referred to as the telencephalon. As a more technical definition, the telencephalon refers to the cerebral hemispheres and other, smaller structures within the brain, although the telencephalon is one of the larger divisions (in terms of number). It is the anterior-most embryological division of the brain that develops from the prosencephalon. The telencephalon is composed of the following sub-regions; Limbic system; Cerebral cortex or cortices of the cerebral hemispheres, Basal ganglia, Olfactory bulb. The telencephalon comprises what most people think of as the "brain." It lies on top of the brainstem and is the largest and most well-developed of the five major divisions of the brain. The telencephalon is the newest structure in the phylogenetic sense, with mammals having the largest and most well-developed among all species. It emerges from the prosencephalon, the first of three vesicles that form from the embryonic neural tube (Christine Fennema-Notestine).[accessedResource: NIFSTD:birnlex_1115][accessDate: 04-11-2010]
cerebrum
FMAID:6200
EHDAA:3496
MAT:0000421
James Malone
CS57622 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158646&type=germplasm
CS57622
http://www.arabidopsis.org/servlets/TairObject?id=1005158646&type=germplasm
GRO:0005429
PO:0020123
MAT:0000357
BTO:0000039
A thimble-shaped group of cells found at the tip of roots; it functions to protect the meristem.
root cap
James Malone
GRO:0005429[accessedResource: BTO:0000039][accessDate: 04-11-2010]
A thimble-shaped group of cells found at the tip of roots; it functions to protect the meristem.[accessedResource: BTO:0000039][accessDate: 04-11-2010]
Carcinoma of Collecting Ducts of Bellini
Collecting duct carcinoma is a renal cell carcinoma described as a rare and aggressive type of renal cell carcinoma. The cancerous cells form irregular tubes inside the tumor. Collecting duct carcinoma is more common among young people and unfortunately is diagnosed in most cases when the cancer has metastasized (spread inside the body).[accessedResource: DOID:4464][accessDate: 04-11-2010]
renal Medullary carcinoma[accessedResource: DOID:4464][accessDate: 04-11-2010]
Carcinoma of Kidney Collecting Duct[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
Kidney Collecting Duct Carcinoma
Carcinoma of the Kidney Collecting Duct[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
Also known as collecting duct carcinoma, this is a rare type of renal carcinoma. It arises from the collecting ducts of the renal medulla, and most authors suggest that this is an aggressive tumor.
Renal carcinoma, collecting duct type[accessedResource: SNOMEDCT:128669006][accessDate: 04-11-2010]
Carcinoma of the Collecting Ducts of Bellini
SNOMEDCT:128669006
DOID:4464
Collecting duct carcinoma (morphologic abnormality)
Kidney Collecting Duct Carcinoma[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
Carcinoma of the Renal Collecting Duct
Renal Collecting Duct Carcinoma
collecting duct carcinoma
Carcinoma of the Kidney Collecting Duct
Bellini duct carcinoma[accessedResource: SNOMEDCT:128669006][accessDate: 04-11-2010]
Collecting duct carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:128669006][accessDate: 04-11-2010]
Renal Collecting Duct Carcinoma[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
Tomasz Adamusiak
Carcinoma of Collecting Ducts of Bellini[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
Carcinoma of Renal Collecting Duct[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
Carcinoma of the Renal Collecting Duct[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
renal Medullary carcinoma
Renal carcinoma, collecting duct type
Carcinoma of Renal Collecting Duct
Bellini Duct Carcinoma
NCIt:C6194
Carcinoma of Kidney Collecting Duct
Collecting duct carcinoma is a renal cell carcinoma described as a rare and aggressive type of renal cell carcinoma. The cancerous cells form irregular tubes inside the tumor. Collecting duct carcinoma is more common among young people and unfortunately is diagnosed in most cases when the cancer has metastasized (spread inside the body).
Also known as collecting duct carcinoma, this is a rare type of renal carcinoma. It arises from the collecting ducts of the renal medulla, and most authors suggest that this is an aggressive tumor.[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
Carcinoma of the Collecting Ducts of Bellini[accessedResource: NCIt:C6194][accessDate: 04-11-2010]
STRUCTURE_ChemicalName_IUPAC:N-[(1-ethylpyrrolidin-2-yl)methyl]-2-methoxy-5-sulfamoylbenzamide
DSSTox_CID:22574
(RS)-(±)-5-aminosulfonyl-N-[(1-ethyl-2-pyrrolidinyl)met hyl]-2-methoxybenzamide
STRUCTURE_Formula:C15H23N3O4S
James Malone
(RS)-(+/-)-sulpiride
Tomasz Adamusiak
CASRN:15676-16-1
DSSTox_Generic_SID:42574
Ele Holloway
Jie Zheng
true
ChromosomalAberration
chromosomal aberration
ChromosomalAberration[accessedResource: MO_78][accessDate: 04-11-2010]
An irregularity in the number or structure of chromosomes, usually in the form of a gain (duplication), loss (deletion), exchange (translocation), or alteration in sequence (inversion) of genetic material.
Tomasz Adamusiak
MO_78
James Malone
An assay in which changes in DNA sequence copy number are analysed using a microarray. For example the analysis of LOH in tumor cells vs a non diseased sample or the comparison of clinical isolated of disease causing bacteria.
comparative genomic hybridization by array
ArrayExpress production team
James Malone
The probability that an event will occur generally with unfavorable outcome.
risk status
Tomasz Adamusiak
ILSXISS46/TejJ
http://jaxmice.jax.org/strain/009269.html
motoneuron[accessedResource: CL:0000100][accessDate: 10-05-2010]
true
A neuron with a motor function; an efferent neuron conveying motor impulses.
James Malone
motor neuron[accessedResource: CL:0000100][accessDate: 10-05-2010]
motor neuron
motoneuron
medial motoneuron
obsolete_motoneuron
CL:0000100
BTO:0000312
lateral motoneuron
duplicate deprecated in favour of motor neurone
A neuron with a motor function; an efferent neuron conveying motor impulses.[accessedResource: BTO:0000312][accessDate: 10-05-2010]
An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.
1.8
An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.[accessedResource: CL:0000100][accessDate: 10-05-2010]
Tomasz Adamusiak
midline primordium
FBbt:00005528
Ele Holloway
James Malone
http://www.ebi.ac.uk/efo/EFO_0002407
fasudil hydrochloride
CHEBI:31593
cocaine
50-36-2
TH-1
GeneRIF:14645200
GeneRIF:15856146
Obstructive cardiomyopathy[accessedResource: SNOMEDCT:45227007][accessDate: 04-11-2010]
A form of CARDIAC MUSCLE disease, characterized by left and/or right ventricular hypertrophy (HYPERTROPHY, LEFT VENTRICULAR; HYPERTROPHY, RIGHT VENTRICULAR), frequent asymmetrical involvement of the HEART SEPTUM, and normal or reduced left ventricular volume. Risk factors include HYPERTENSION; AORTIC STENOSIS; and gene MUTATION; (FAMILIAL HYPERTROPHIC CARDIOMYOPATHY).[accessedResource: MSH:D002312][accessDate: 04-11-2010]
GeneRIF:12754703
GeneRIF:12386147
IHSS
GeneRIF:15317754
Hypertrophic cardiomyopathy (disorder)[accessedResource: SNOMEDCT:233873004][accessDate: 04-11-2010]
Cardiomyopathies, Hypertrophic Obstructive[accessedResource: MSH:D002312][accessDate: 04-11-2010]
GeneRIF:15056834
hypertrophic cardiomyopathy
hyper. obst. cardiomyopathy
GeneRIF:12474143
GeneRIF:12810613
GeneRIF:15118286
GeneRIF:12642359
GeneRIF:11853553
GeneRIF:15314809
GeneRIF:15582318
Obstructive Cardiomyopathy, Hypertrophic[accessedResource: MSH:D002312][accessDate: 04-11-2010]
A condition in which the myocardium is hypertrophied without an obvious cause. The hypertrophy is generally asymmetric and may be associated with obstruction of the ventricular outflow tract.[accessedResource: NCIt:C34449][accessDate: 04-11-2010]
James Malone
DOID:11984
Idiopathic Hypertrophic Subvalvular Stenosis[accessedResource: MSH:D002312][accessDate: 04-11-2010]
Hypertrophic Obstructive Cardiomyopathy
GeneRIF:12628722
GeneRIF:15737656
SUBVALV STENOSIS[accessedResource: MSH:D002312][accessDate: 04-11-2010]
Cardiomyopathies, Hypertrophic
SUBVALV STENOSIS IDIOPATHIC HYPERTROPHIC
Idiopathic Hypertrophic Subaortic Stenosis[accessedResource: MSH:D002312][accessDate: 04-11-2010]
GeneRIF:12110947
Obstructive Cardiomyopathies, Hypertrophic
GeneRIF:15673802
IHSSs
primary hypertrophic cardiomyopathy (disorder) [Ambiguous][accessedResource: DOID:11984][accessDate: 04-11-2010]
IHSS[accessedResource: MSH:D002312][accessDate: 04-11-2010]
HCM - Hypertrophic cardiomyopathy[accessedResource: SNOMEDCT:233873004][accessDate: 04-11-2010]
primary hypertrophic cardiomyopathy (disorder) [Ambiguous]
Cardiomyopathies, Hypertrophic[accessedResource: MSH:D002312][accessDate: 04-11-2010]
hypertrophic myocardiopathy[accessedResource: DOID:11984][accessDate: 04-11-2010]
HCM - Hypertrophic cardiomyopathy
GeneRIF:12169652
IDIOPATHIC HYPERTROPHIC SUBVALV STENOSIS[accessedResource: MSH:D002312][accessDate: 04-11-2010]
HYPERTR OBSTR CARDIOMYOP[accessedResource: ICD9:425.1][accessDate: 04-11-2010]
Hypertrophy, Asymmetric Septal
GeneRIF:12135130
Idiopathic Hypertrophic Subvalvular Stenosis
A form of CARDIAC MUSCLE disease, characterized by left and/or right ventricular hypertrophy (HYPERTROPHY, LEFT VENTRICULAR; HYPERTROPHY, RIGHT VENTRICULAR), frequent asymmetrical involvement of the HEART SEPTUM, and normal or reduced left ventricular volume. Risk factors include HYPERTENSION; AORTIC STENOSIS; and gene MUTATION; (FAMILIAL HYPERTROPHIC CARDIOMYOPATHY).
IHSSs[accessedResource: MSH:D002312][accessDate: 04-11-2010]
SNOMEDCT:45227007
Asymmetric Septal Hypertrophies
Primary hypertrophic cardiomyopathy
Obstructive cardiomyopathy
GeneRIF:15698845
GeneRIF:12376254
GeneRIF:12705874
SNOMEDCT:233873004
ICD9:425.1
Hypertrophic cardiomyopathy (disorder)
Asymmetric Septal Hypertrophies[accessedResource: MSH:D002312][accessDate: 04-11-2010]
GeneRIF:16288990
GeneRIF:16004897
MSH:D002312
GeneRIF:11955864
GeneRIF:12538779
HYPERTR OBSTR CARDIOMYOP
hypertrophic obstructive cardiomyopathy (disorder)[accessedResource: DOID:11984][accessDate: 04-11-2010]
A condition in which the myocardium is hypertrophied without an obvious cause. The hypertrophy is generally asymmetric and may be associated with obstruction of the ventricular outflow tract.
Septal Hypertrophy, Asymmetric[accessedResource: MSH:D002312][accessDate: 04-11-2010]
SUBVALV STENOSIS
HOCM - Hypertrophic obstructive cardiomyopathy[accessedResource: SNOMEDCT:45227007][accessDate: 04-11-2010]
hyper. obst. cardiomyopathy[accessedResource: DOID:11984][accessDate: 04-11-2010]
Hypertrophic obstructive cardiomyopathy (disorder)
hypertrophic myocardiopathy
NCIt:C34449
HOCM - Hypertrophic obstructive cardiomyopathy
Primary hypertrophic cardiomyopathy[accessedResource: SNOMEDCT:233873004][accessDate: 04-11-2010]
Idiopathic Hypertrophic Subaortic Stenosis
CHEBI:35705
James Malone
immunosuppressive agents
immunosuppressive agent
inmunosupresor
An agent that suppresses immune function by one of several mechanisms of action. Classical cytotoxic immunosuppressants act by inhibiting DNA synthesis. Others may act through activation of T-cells or by inhibiting the activation of helper cells. In addition, an immunosuppressive agent is a role played by a compound which is exhibited by a capability to diminish the extent and/or voracity of an immune response.
immunosuppressant
http://www.ebi.ac.uk/efo/EFO_0001853
Glutamin
Hgln
InChIKey=ZDXPYRJPNDTMRX-HDAMEQSMCZ
NC(CCC(N)=O)C(O)=O
C5H10N2O3
2,5-diamino-5-oxopentanoic acid
2-amino-4-carbamoylbutanoic acid
2-Aminoglutaramic acid
Glutaminsaeure-5-amid
glutamic acid gamma-amide
CHEBI:28300
glutamine
InChI=1/C5H10N2O3/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2,(H2,7,8)(H,9,10)/f/h9H,7H2
http://www.ebi.ac.uk/efo/EFO_0001546
An alpha-amino acid that has formula C5H10N2O3.
Ele Holloway
James Malone
MCF-7aro
James Malone
ventral striatum
FMA:77614
This should become a material entity with the role of environment
James Malone
The external elements and conditions which surround, influence, and affect the life and development of an organism or population.
environmental factor
true
environment factor
Tomasz Adamusiak
ILSXISS79/TejJ
James Malone
The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch.
L2 larva
WBls:0000027
PSEUDOMONAS INFECT[accessedResource: MSH:D011552][accessDate: 04-11-2010]
Bacterial infection due to Pseudomonas
GeneRIF:15375173
Pseudomonas infectious disease
Bacterial infectious disease due to Pseudomonas (disorder)
Infections with bacteria of the genus PSEUDOMONAS.
SNOMEDCT:63398001
GeneRIF:16299282
Bacterial infectious disease due to Pseudomonas (disorder)[accessedResource: DOID:2903][accessDate: 04-11-2010]
Bacterial infection due to Pseudomonas (disorder)[accessedResource: SNOMEDCT:63398001][accessDate: 04-11-2010]
INFECT PSEUDOMONAS
GeneRIF:15950065
Bacterial infection due to Pseudomonas[accessedResource: SNOMEDCT:63398001][accessDate: 04-11-2010]
Pseudomonas Infections[accessedResource: MSH:D011552][accessDate: 04-11-2010]
Bacterial infection due to Pseudomonas (disorder)
GeneRIF:14734763
James Malone
GeneRIF:14695625
Infections with bacteria of the genus PSEUDOMONAS.[accessedResource: MSH:D011552][accessDate: 04-11-2010]
Pseudomonas infection
GeneRIF:11906036
Pseudomonas infectious disease[accessedResource: DOID:2903][accessDate: 04-11-2010]
Infections, Pseudomonas
MSH:D011552
DOID:2903
James Malone
dorsal imaginal precursor
FBbt:00005831
James Malone
embryonic brain
FBbt:00001060
organochlorine pesticides
40573
Ocs
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_cycle_design[accessedResource: MO_822][accessDate: 04-11-2010]
Tomasz Adamusiak
cell cycle design
MO_822
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_cycle_design
Type II Diabetes[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
Adult-Onset Diabetes
Tomasz Adamusiak
A type of diabetes mellitus that is characterized by insulin resistance or desensitization and increased blood glucose levels. This is a chronic disease that can develop gradually over the life of a patient and can be linked to both environmental factors and heredity.
NCIt:C26747
Non-Insulin Dependent Diabetes Mellitus[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
T2DM - Type 2 Diabetes mellitus
Type II Diabetes
NIDDM[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
Type 2 Diabetes Mellitus Non-Insulin Dependent
DOID:9352
non-insulin-dependent diabetes mellitus
Type 2 Diabetes Mellitus[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
Adult-Onset Diabetes[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
T2DM - Type 2 Diabetes mellitus[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
Non-Insulin Dependent Diabetes[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
A type of diabetes mellitus that is characterized by insulin resistance or desensitization and increased blood glucose levels. This is a chronic disease that can develop gradually over the life of a patient and can be linked to both environmental factors and heredity.[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
NIDDM
Type 2 Diabetes Mellitus Non-Insulin Dependent[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
Diabetes, Type 2[accessedResource: NCIt:C26747][accessDate: 04-11-2010]
Type 2 Diabetes Mellitus
type II diabetes mellitus
Diabetes, Type 2
Non-Insulin Dependent Diabetes
Ele Holloway
James Malone
CaOv3
Posterior part of leg[accessedResource: FMAID:24984][accessDate: 04-11-2010]
Tomasz Adamusiak
calf
FMAID:24984
Posterior part of leg
MDAMB415
James Malone
GM06990 is a cell line derived from some lymphoblastoid cells from a CEPH familiy of UTAH/MORMON ethnicity. It is supplied by Corriell under catalogue number GM06990.
GM06990
Anna Farne
An assay in which the transcriptome of a biological sample is analysed by serial analysis of gene expression (SAGE)
transcription profiling by SAGE
Tomasz Adamusiak
posterior lateral line neuromast
ZFA:0000940
Tomasz Adamusiak
anguloarticular
ZFA:0000467
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#dye_swap_replicate[accessedResource: MO_901][accessDate: 04-11-2010]
James Malone
A die swap replicate is a replicate role which is borne by one of a pair of replicate assays in which LabeledExtracts derived from the same BioMaterial used for both assays (e.g., a hybridization or a 2-D gel run) differ only in that the dyes used for labeling have been reversed, e.g., assay 1: A-Cy3 vs. B-Cy5, and assay 2: A-Cy5 vs. B-Cy3. The purpose of using dye-swap replicate pairs is to assess or remove dye-specific biases from the combined experimental results.
die swap replicate
MO_901
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#dye_swap_replicate
James Malone
GM12815
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#software_variation_design[accessedResource: MO_643][accessDate: 04-11-2010]
Tomasz Adamusiak
software variation design
MO_643
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#software_variation_design
Phenobarbituric Acid
http://www.ebi.ac.uk/efo/EFO_0001591
A barbiturate that has formula C12H12N2O3.
Luminal
5-Phenyl-5-ethylbarbituric acid
Phenobarbitol
Barbituric acid substituted at C-5 by ethyl and phenyl groups.
C12H12N2O3
PHENYLETHYLMALONYLUREA
Phenobarbitone
5-ethyl-5-phenyl-2,4,6(1H,3H,5H)-pyrimidinetrione
CCC1(C(=O)NC(=O)NC1=O)c1ccccc1
InChIKey=DDBREPKUVSBGFI-KGCNKATMCV
InChI=1/C12H12N2O3/c1-2-12(8-6-4-3-5-7-8)9(15)13-11(17)14-10(12)16/h3-7H,2H2,1H3,(H2,13,14,15,16,17)/f/h13-14H
5-Ethyl-5-phenyl-pyrimidine-2,4,6-trione
Phenylethylbarbitursaeure
CHEBI:8069
5-Ethyl-5-phenylbarbituric acid
Phenylaethylbarbitursaeure
phenobarbital
Phenylethylbarbiturate
James Malone
Phenylethylbarbituric Acid
Denotes a person having origins in any of the original peoples of Hawaii, a person from there, or their descendants elsewhere.[accessedResource: NCIt:C43394][accessDate: 04-11-2010]
Native Hawaiian[accessedResource: NCIt:C43394][accessDate: 04-11-2010]
Tomasz Adamusiak
Denotes a person having origins in any of the original peoples of Hawaii, a person from there, or their descendants elsewhere.
Hawaiian
NCIt:C43394
Native Hawaiian
[O-][Se]([O-])(=O)=O
tetraoxidoselenate(2-)
[SeO4](2-)
SELENATE ION
InChI=1/H2O4Se/c1-5(2,3)4/h(H2,1,2,3,4)/p-2/fO4Se/q-2
InChIKey=QYHFIVBSNOWOCQ-VMRORRRTCU
selenate
A selenium oxoanion that has formula O4Se.
O4Se
Tomasz Adamusiak
spinocerebellar ataxia type 17
OntologyMappingImporter following MAT:0000087
MFO:0079180
TAO:0000108
fins
XAO:0000002
fins[accessedResource: TAO:0000108][accessDate: 04-11-2010]
James Malone
ZFA:0000108
MAT:0000087
Surface structure involved in locomotion.
Surface structure involved in locomotion.[accessedResource: TAO:0000108][accessDate: 04-11-2010]
fin
James Malone
RNAi
The act of alteration or modification of a cell e.g. RNAi
cellular modification
Arrhythmogenic right ventricular cardiomyopathy (disorder)[accessedResource: SNOMEDCT:281170005][accessDate: 04-11-2010]
Arrhythmogenic right ventricular dysplasia[accessedResource: SNOMEDCT:281170005][accessDate: 04-11-2010]
Tomasz Adamusiak
arrhythmogenic right ventricular cardiomyopathy
SNOMEDCT:281170005
Arrhythmogenic right ventricular cardiomyopathy (disorder)
Arrhythmogenic right ventricular dysplasia
Ele Holloway
James Malone
CHL1
James Malone
CS57733 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158757&type=germplasm
CS57733
http://www.arabidopsis.org/servlets/TairObject?id=1005158757&type=germplasm
Mucosa of tongue
Tomasz Adamusiak
tongue mucosa
Mucosa of tongue[accessedResource: FMAID:54807][accessDate: 04-11-2010]
FMAID:54807
Jie Zheng
Mucous membrane of tongue
Lingual mucosa
Lingual mucosa[accessedResource: FMAID:54807][accessDate: 04-11-2010]
Mucous membrane of tongue[accessedResource: FMAID:54807][accessDate: 04-11-2010]
James Malone
material entity
A material entity is an entity that exists in full during the length of time of its existence, persists through this time while maintaining its identity and has no temporal parts. For example a heart, a human, a fly, a microarray.
true
A heart, a human, a fly, a microarray.
sample factor
http://www.ebi.ac.uk/efo/EFO_0001434
An independent continuant [snap:IndependentContinuant] that is spatially extended whose identity is independent of that of other entities and can be maintained through time. Note: Material entity [snap:MaterialEntity] subsumes object [snap:Object], fiat object part [snap:FiatObjectPart], and object aggregate [snap:ObjectAggregate], which assume a three level theory of granularity, which is inadequate for some domains, such as biology.
use EFO_0000527
obsolete_hemopoietic progenitor cell
hemopoietic progenitor cell
HSC[accessedResource: CL:0000037][accessDate: 10-05-2010]
CL:0000037
hematopoietic stem cell[accessedResource: CL:0000037][accessDate: 10-05-2010]
colony forming unit hematopoietic
colony forming unit hematopoietic[accessedResource: CL:0000037][accessDate: 10-05-2010]
hematopoietic progenitor cell
hemopoietic stem cell
James Malone
HSC
hematopoietic progenitor cell[accessedResource: CL:0000037][accessDate: 10-05-2010]
A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.[accessedResource: CL:0000037][accessDate: 10-05-2010]
A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.
true
hematopoietic stem cell
hemopoietic stem cell[accessedResource: CL:0000037][accessDate: 10-05-2010]
hemopoietic progenitor cell[accessedResource: CL:0000037][accessDate: 10-05-2010]
abacavir
136470-78-5
3-aminophenol
24497
3-aminophenol
4497
591-27-5
C6H7NO
Tomasz Adamusiak
presumptive neural plate
ZFA:0000063
NCIt:C9157
Intestinal Gastric Adenocarcinoma[accessedResource: NCIt:C9157][accessDate: 04-11-2010]
DOID:8026
Intestinal Gastric Adenocarcinoma
Intestinal Stomach Adenocarcinoma[accessedResource: NCIt:C9157][accessDate: 04-11-2010]
James Malone
Intestinal Stomach Adenocarcinoma
An adenocarcinoma of the stomach arising on a background of intestinal metaplasia. Microscopically, it is characterized by a glandular pattern and it closely resembles a colonic adenocarcinoma. Grossly, it tends to be nodular, polypoid or ulcerated.
gastric intestinal type adenocarcinoma
Intestinal Adenocarcinoma of the Stomach
Intestinal Adenocarcinoma of Stomach[accessedResource: NCIt:C9157][accessDate: 04-11-2010]
Intestinal Adenocarcinoma of the Stomach[accessedResource: NCIt:C9157][accessDate: 04-11-2010]
An adenocarcinoma of the stomach arising on a background of intestinal metaplasia. Microscopically, it is characterized by a glandular pattern and it closely resembles a colonic adenocarcinoma. Grossly, it tends to be nodular, polypoid or ulcerated.[accessedResource: NCIt:C9157][accessDate: 04-11-2010]
Intestinal Adenocarcinoma of Stomach
A metallotexaphyrin that has formula C52H72GdN5O14.
Gd-Tex
http://www.ebi.ac.uk/efo/EFO_0001575
InChIKey=VAZLWPAHMORDGR-MPNKMPCTDC
bis(acetato-kappaO){3,3'-[4,5-diethyl-16,17-bis{2-[2-(2-methoxyethoxy)ethoxy]ethoxy}-10,23-dimethyl-13,20,25,26,27-pentaazapentacyclo[20.2.1.1(3,6).1(8,11).0(14,19)]heptacosa-1,3,5,7,9,11(26),12,14,16,18,20,22(25),23-tridecaene-9,24-diyl-kappa(5)N(13),N(20),N(25),N(26),N(27)]dipropan-1-olato}gadolinium
InChI=1/C48H66N5O10.2C2H4O2.Gd/c1-7-35-36(8-2)40-28-42-38(12-10-14-55)34(4)46(53-42)32-50-44-30-48(63-26-24-61-22-20-59-18-16-57-6)47(62-25-23-60-21-19-58-17-15-56-5)29-43(44)49-31-45-33(3)37(11-9-13-54)41(52-45)27-39(35)51-40;2*1-2(3)4;/h27-32,54-55H,7-26H2,1-6H3;2*1H3,(H,3,4);/q-1;;;+3/p-2/b39-27-,40-28-,41-27-,42-28-,45-31-,46-32-,49-31+,49-43+,50-32+,50-44+;;;/fC48H66N5O10.2C2H3O2.Gd/qm;2*-1;m
Gd texaphyrin
CHEBI:50161
Xcytrin
C52H72GdN5O14
gadolinium texaphyrin
motexafin gadolinium
CCc1c(CC)c2C=C3C(CCCO)=C(C)C4=[N]3[Gd]356(OC(C)=O)(OC(C)=O)[N](=CC7=[N]3C(=Cc1n25)C(CCCO)=C7C)c1cc(OCCOCCOCCOC)c(OCCOCCOCCOC)cc1[N]6=C4
MGd
(PB-7-11-233'2'4)-bis(acetato-kappaO)(9,10-diethyl-20,21-bis(2-(2-(2-methoxyethoxy)ethoxy)ethoxy)-4,15-dimethyl-8,11-imino-3,6:16,13-dinitrilo-1,18-benzodiazacycloeicosine-5,14-dipropanolato-kappaN(1),kappaN(18),kappaN(23),kappaN(24),kappaN(25))gadolinium
James Malone
true
2.1
duplicate with EFO_0002785
obsolete_GM12891
Ele Holloway
James Malone
true
1.8
duplicate with EFO_0002059
obsolete_HT1080
talus
The highest of the tarsal bones and the one that articulates with the tibia and fibula to form the ankle joint.[accessedResource: BTO:0002354][accessDate: 04-11-2010]
astragalus[accessedResource: BTO:0002354][accessDate: 04-11-2010]
ankle bone[accessedResource: BTO:0002354][accessDate: 04-11-2010]
talus[accessedResource: BTO:0002354][accessDate: 04-11-2010]
Ankle Joint
ankle bone
The highest of the tarsal bones and the one that articulates with the tibia and fibula to form the ankle joint.
A gliding joint between the distal ends of the tibia and fibula and the proximal end of the talus.[accessedResource: NCIt:C32078][accessDate: 04-11-2010]
os tarsi tibiale[accessedResource: BTO:0002354][accessDate: 04-11-2010]
A gliding joint between the distal ends of the tibia and fibula and the proximal end of the talus.
Ankle Joint[accessedResource: NCIt:C32078][accessDate: 04-11-2010]
os tarsi tibiale
astragaloid bone
ankle
astragaloid bone[accessedResource: BTO:0002354][accessDate: 04-11-2010]
NCIt:C32078
James Malone
astragalus
BTO:0002354
caspofungin
179463-17-3
clomipramine hydrochloride
DSSTox_Generic_SID:C19H24Cl2N2
CASRN:17321-77-6
James Malone
DSSTox_CID:42633
Tomasz Adamusiak
STRUCTURE_Formula:3-(3-chloro-10,11-dihydro-5H-dibenzo[b,f]azepin-5-yl)-N,N-dimethylpropan-1-amine hydrochloride
Ele Holloway
Ele Holloway
James Malone
ssMCF7
GeneRIF:15520307
Ayerzas Syndrome
GeneRIF:15192043
GeneRIF:15295086
GeneRIF:16113050
Syndrome, Ayerza-Arrilaga[accessedResource: MSH:D006976][accessDate: 04-11-2010]
GeneRIF:12896876
GeneRIF:16085672
DOID:6432
MSH:D006976
GeneRIF:14530202
GeneRIF:15146952
GeneRIF:12358323
GeneRIF:15364894
GeneRIF:15516492
Ayerza Syndrome
Increased VASCULAR RESISTANCE in the PULMONARY CIRCULATION, usually secondary to HEART DISEASES or LUNG DISEASES.
GeneRIF:15979050
GeneRIF:12835224
GeneRIF:15217799
GeneRIF:12391278
GeneRIF:14726295
GeneRIF:14684682
pulmonary hypertension
GeneRIF:14970910
GeneRIF:15242552
James Malone
pulmonary hypertension (disorder)[accessedResource: DOID:6432][accessDate: 04-11-2010]
GeneRIF:12177436
HYPERTENSION PULM[accessedResource: MSH:D006976][accessDate: 04-11-2010]
GeneRIF:15824199
GeneRIF:12909593
GeneRIF:16236896
GeneRIF:15687131
pulmonary hypertension (disorder)
PHT - Pulmonary hypertension
GeneRIF:15353500
GeneRIF:12714563
A syndrome with pathological changes in the pulmonary arteries and impaired PULMONARY CIRCULATION that can be the result of PULMONARY HYPERTENSION. Ayerza syndrome is characterized by slowly developing ASTHMA; BRONCHITIS; DYSPNEA; and CYANOSIS in association with POLYCYTHEMIA.[accessedResource: MSH:D006976][accessDate: 04-11-2010]
GeneRIF:12750401
Syndrome, Ayerza[accessedResource: MSH:D006976][accessDate: 04-11-2010]
GeneRIF:16215633
GeneRIF:14512515
GeneRIF:15286002
Pulmonary hypertension, NOS
Pulmonary hypertension, NOS[accessedResource: SNOMEDCT:70995007][accessDate: 04-11-2010]
A syndrome with pathological changes in the pulmonary arteries and impaired PULMONARY CIRCULATION that can be the result of PULMONARY HYPERTENSION. Ayerza syndrome is characterized by slowly developing ASTHMA; BRONCHITIS; DYSPNEA; and CYANOSIS in association with POLYCYTHEMIA.
Ayerza's Syndrome[accessedResource: MSH:D006976][accessDate: 04-11-2010]
GeneRIF:12740218
GeneRIF:12244304
GeneRIF:14715505
Syndrome, Ayerza-Arrilaga
Increased VASCULAR RESISTANCE in the PULMONARY CIRCULATION, usually secondary to HEART DISEASES or LUNG DISEASES.[accessedResource: MSH:D006976][accessDate: 04-11-2010]
PHT - Pulmonary hypertension[accessedResource: SNOMEDCT:70995007][accessDate: 04-11-2010]
GeneRIF:12391106
SNOMEDCT:70995007
GeneRIF:14759414
GeneRIF:15725412
GeneRIF:12547729
GeneRIF:15031260
GeneRIF:15155268
GeneRIF:15761249
GeneRIF:15618545
GeneRIF:15331358
GeneRIF:15505094
GeneRIF:12016106
GeneRIF:15684702
PULM HYPERTENSION
GeneRIF:15358862
GeneRIF:14507115
James Malone
Tomasz Adamusiak
case control study
NCIt:C15197
MAT:0000135
EHDAA:2205
SAEL:62
FMAID:7195
EMAPA:16728
AAO:0000275
XAO:0000119
Lobular organ which has as its parts alveoli connected to the tracheobronchial tree. Examples: There are only two instances, right lung and left lung.
lung
lungs[accessedResource: MAT:0000135][accessDate: 04-11-2010]
EV:0100042
One of the usually paired compound saccular thoracic organs that constitute the basic respiratory organ of air-breathing vertebrates.
lungs
One of the usually paired compound saccular thoracic organs that constitute the basic respiratory organ of air-breathing vertebrates.[accessedResource: BTO:0000763][accessDate: 04-11-2010]
MA:0000415
James Malone
BTO:0000763
NHEK
Tomasz Adamusiak
ILSXISS97/TejJ
http://jaxmice.jax.org/strain/009285.html
3,3',4,4'-tetrachlorobiphenyl
22514
3,3',4,4'-tetrachlorobiphenyl
32598-13-3
C12H6Cl4
Tomasz Adamusiak
childhood acute myeloid leukemia
NIC Thesaurus: C9160
stalk[accessedResource: BTO:0001300][accessDate: 04-11-2010]
BTO:0001300
culm
MAT:0000239
The main trunk of a plant; specifically: a primary plant axis that develops buds and shoots instead of roots.
axis[accessedResource: BTO:0001300][accessDate: 04-11-2010]
PO:0009047
The main trunk of a plant; specifically: a primary plant axis that develops buds and shoots instead of roots.[accessedResource: BTO:0001300][accessDate: 04-11-2010]
axis
James Malone
stalk
stem
culm[accessedResource: BTO:0001300][accessDate: 04-11-2010]
Uvula of palate[accessedResource: FMA:55022][accessDate: 04-11-2010]
James Malone
uvula
FMA:55022
NCIt:C12232
Uvula of palate
James Malone
http://www.ebi.ac.uk/efo/EFO_0001808
true
A density unit is a derived unit which is a standard measure of the influence exerted by some mass.
A derived unit which is a standard measure of the influence exerted by some mass.
density unit
UO:0000182
A gene expression hybridization on an Affymetrix U133 chip
An assay which uses array based technology to determine information about nucleic acids or proteins
array assay
James Malone
TBP-105Q is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/008075.html
TBP-105Q
JAX:8075
HLRCC
Hereditary Leiomyomatosis and Renal Cell Carcinoma[accessedResource: NCIt:C51302][accessDate: 04-11-2010]
HLRCC[accessedResource: NCIt:C51302][accessDate: 04-11-2010]
James Malone
Hereditary Leiomyomatosis and Renal Cell Carcinoma
NCIt:C51302
hereditary leiomyomatosis and renal cell cancer
James Malone
http://www.ebi.ac.uk/efo/EFO_0002655
Saccharomyces cerevisiae
baker's yeast
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#vacuum_dryer[accessedResource: MO_696][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0002026
An instrument which removes liquid by the application of negative pressure, i.e. vacuum.
vacuum dryer
MO_696
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#vacuum_dryer
James Malone
NCI-H3255
H3255
Tomasz Adamusiak
DSSTox_Generic_SID:C10H6ClNO3
7-chlorokynurenic acid
STRUCTURE_Formula:7-chloro-4-hydroxyquinoline-2-carboxylic acid
7-chloro-4-hydroxyquinoline-2-carboxylic acid
CASRN:18000-24-3
James Malone
DSSTox_CID:42568
Ele Holloway
Tomasz Adamusiak
cephalic musculature
ZFA:0000328
tetracycline
(4S,4aS,5aS,6S,12aS)-4-(dimethylamino)-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-1,4,4a,5,5a,6,11,12a-octahydrotetracene-2-carboxamide
23645
3645
60-54-8
C22H24N2O8
Helen Parkinson
Solexa sequencing of coding RNA
An assay which uses high throughput sequencing technology to determine the sequence of nucleic acids
high throughput sequencing assay
Tomasz Adamusiak
ILSXISS49/TejJ
http://jaxmice.jax.org/strain/009271.html
haemopoietic system cell line
Jie Zheng
Tomasz Adamusiak
small adipocyte
James Malone
ectoderm anlage in statu nascendi
FBbt:00005414
Ele Holloway
James Malone
J82
Adenoid Cystic Carcinomas[accessedResource: MSH:D003528][accessDate: 04-11-2010]
Cylindroma
NCIt:C2970
SNOMEDCT:11671000
adenoid cystic carcinoma
Cylindromas
GeneRIF:12624503
Adenocarcinoma, cylindroid
DOID:4866
GeneRIF:12452045
adenoid cystic cancer
Cylindroma (except Cylindroma of skin, M-82000)[accessedResource: SNOMEDCT:11671000][accessDate: 04-11-2010]
adenoid cystic carcinoma (morphologic abnormality)[accessedResource: DOID:4866][accessDate: 04-11-2010]
Cylindroma, NOS (except Cylindroma of skin, M-82000)[accessedResource: SNOMEDCT:11671000][accessDate: 04-11-2010]
GeneRIF:15370139
GeneRIF:15292943
Adenoid cystic carcinoma (morphologic abnormality)
Adenocystic Carcinoma
Cylindroma[accessedResource: MSH:D003528][accessDate: 04-11-2010]
GeneRIF:15943036
Bronchial adenoma, cylindroid
Cylindroma, NOS (except Cylindroma of skin, M-82000)
Carcinoma characterized by bands or cylinders of hyalinized or mucinous stroma separating or surrounded by nests or cords of small epithelial cells. When the cylinders occur within masses of epithelial cells, they give the tissue a perforated, sievelike, or cribriform appearance. Such tumors occur in the mammary glands, the mucous glands of the upper and lower respiratory tract, and the salivary glands. They are malignant but slow-growing, and tend to spread locally via the nerves. (Dorland, 27th ed)[accessedResource: MSH:D003528][accessDate: 04-11-2010]
Adenocarcinoma, cylindroid[accessedResource: SNOMEDCT:11671000][accessDate: 04-11-2010]
James Malone
Cylindroma (morphologic abnormality)
adenoid cystic cancer[accessedResource: DOID:4866][accessDate: 04-11-2010]
Cylindroma NOS
Carcinoma characterized by bands or cylinders of hyalinized or mucinous stroma separating or surrounded by nests or cords of small epithelial cells. When the cylinders occur within masses of epithelial cells, they give the tissue a perforated, sievelike, or cribriform appearance. Such tumors occur in the mammary glands, the mucous glands of the upper and lower respiratory tract, and the salivary glands. They are malignant but slow-growing, and tend to spread locally via the nerves. (Dorland, 27th ed)
Adenocystic carcinoma[accessedResource: SNOMEDCT:11671000][accessDate: 04-11-2010]
A malignant tumor arising from the epithelial cells. Microscopically, the neoplastic epithelial cells form cylindrical spatial configurations (cribriform or classic type of adenoid cystic carcinoma), cordlike structures (tubular type of adenoid cystic carcinoma), or solid structures (basaloid variant of adenoid cystic carcinoma). Adenoid cystic carcinomas mostly occur in the salivary glands. Other primary sites of involvement include the lacrimal gland, the larynx, and the lungs. Adenoid cystic carcinomas spread along nerve sheaths, resulting in severe pain, and they tend to recur. Lymph node metastases are unusual; hematogenous tumor spread is characteristic.
Cylindroma (except Cylindroma of skin, M-82000)
Cylindroma NOS[accessedResource: DOID:4866][accessDate: 04-11-2010]
Adenoid Cystic Carcinomas
Bronchial adenoma, cylindroid[accessedResource: SNOMEDCT:11671000][accessDate: 04-11-2010]
Cylindroma (morphologic abnormality)[accessedResource: DOID:4866][accessDate: 04-11-2010]
A malignant tumor arising from the epithelial cells. Microscopically, the neoplastic epithelial cells form cylindrical spatial configurations (cribriform or classic type of adenoid cystic carcinoma), cordlike structures (tubular type of adenoid cystic carcinoma), or solid structures (basaloid variant of adenoid cystic carcinoma). Adenoid cystic carcinomas mostly occur in the salivary glands. Other primary sites of involvement include the lacrimal gland, the larynx, and the lungs. Adenoid cystic carcinomas spread along nerve sheaths, resulting in severe pain, and they tend to recur. Lymph node metastases are unusual; hematogenous tumor spread is characteristic.[accessedResource: NCIt:C2970][accessDate: 04-11-2010]
GeneRIF:15529180
Cylindromas[accessedResource: MSH:D003528][accessDate: 04-11-2010]
GeneRIF:11780226
MSH:D003528
EV:0100134
chief cell[accessedResource: TAO:0009207][accessDate: 04-11-2010]
Parathyroid chief cell[accessedResource: CL:0000446][accessDate: 04-11-2010]
EHDAA:3870
Tomasz Adamusiak
parathyroid
chief cell of parathyroid gland
Parathyroid chief cell
Parathyroid gland chief cell
Any of usually four small endocrine glands that are adjacent to or embedded in the thyroid gland and produce parathyroid hormone.
parathyroid gland[accessedResource: BTO:0000997][accessDate: 04-11-2010]
chief cell of parathyroid gland[accessedResource: CL:0000446][accessDate: 04-11-2010]
BTO:0000997
TAO:0009207
MA:0000128
Parathyroid gland chief cell[accessedResource: CL:0000446][accessDate: 04-11-2010]
chief cell
An epithelial cell of the parathyroid gland that is arranged in wide, irregular interconnecting columns; responsible for the synthesis and secretion of parathyroid hormone.
An epithelial cell of the parathyroid gland that is arranged in wide, irregular interconnecting columns; responsible for the synthesis and secretion of parathyroid hormone.[accessedResource: CL:0000446][accessDate: 04-11-2010]
Principal cell of parathyroid gland[accessedResource: CL:0000446][accessDate: 04-11-2010]
XAO:0000167
parathyroid hormone secreting cell[accessedResource: CL:0000446][accessDate: 04-11-2010]
James Malone
CL:0000446
EHDAA:3864
Parathyroid gland
Any of usually four small endocrine glands that are adjacent to or embedded in the thyroid gland and produce parathyroid hormone.[accessedResource: BTO:0000997][accessDate: 04-11-2010]
parathyroid hormone secreting cell
Principal cell of parathyroid gland
FMAID:13890
James Malone
CS57924 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005164920&type=germplasm
CS57924
http://www.arabidopsis.org/servlets/TairObject?id=1005164920&type=germplasm
STRUCTURE_ChemicalName_IUPAC:(2Z)-N-[(2S,3R,4R,5R,6R)-2-{[(2S,3S,4S,5R,6S)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}-6-{2-[(3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]-2-hydroxyethyl}-4,5-dihydroxytetrahydro-2H-pyran-3-yl]-12-methyltridec-2-enamide
DSSTox_CID:16730
DSSTox_Generic_SID:36730
tunicamycin
Ele Holloway
James Malone
STRUCTURE_Formula:C37H60N4O16
CASRN:11089-65-9
Tomasz Adamusiak
James Malone
internal carotid artery
FMA:3947
NCIt:C32836
HCC1007
A HCC1007 is a cell line.
A HCC1007 is all of the following: something that is bearer of a breast carcinoma, something that derives from an epithelial cell, and something that derives from a mammary gland.
James Malone
Natural Language Generator 8th April 2010
James Malone
The quality of an organism that has successful reproduced.
parous
Tomasz Adamusiak
Blood (fetal) (MMHCC)
Fetal Blood[accessedResource: NCIt:C22560][accessDate: 04-11-2010]
Fetal Blood
Jie Zheng
fetal blood cell
Blood (fetal) (MMHCC)[accessedResource: NCIt:C22560][accessDate: 04-11-2010]
NCIt:C22560
antioxydant
CHEBI:22586
A substance that opposes oxidation or inhibits reactions brought about by dioxygen or peroxides.
James Malone
antoxidant
http://www.ebi.ac.uk/efo/EFO_0001817
antioxidants
antioxidant
Cataract (M-54510)[accessedResource: SNOMEDCT:128306009][accessDate: 04-11-2010]
ICD9:366
GeneRIF:15208569
Cat. - Cataract[accessedResource: SNOMEDCT:193570009][accessDate: 04-11-2010]
GeneRIF:12724621
GeneRIF:15709761
CATARACT NEC
GeneRIF:15347804
SNOMEDCT:193620000
GeneRIF:12079281
GeneRIF:12620964
ICD9:366.46
SNOMEDCT:193623003
GeneRIF:15452067
Cataract associated with radiation and other physical influences[accessedResource: ICD9:366.46][accessDate: 04-11-2010]
GeneRIF:12426373
James Malone
Cataract (morphologic abnormality)[accessedResource: SNOMEDCT:128306009][accessDate: 04-11-2010]
GeneRIF:15322286
GeneRIF:12942049
ICD9:366.4
Lenticular opacity
GeneRIF:12089525
Cataract associated with other syndromes
GeneRIF:12485166
Other cataract (disorder)[accessedResource: SNOMEDCT:193620000][accessDate: 04-11-2010]
GeneRIF:15277496
GeneRIF:15016766
Cat. - Cataract
CATARACT W RADIATION[accessedResource: ICD9:366.46][accessDate: 04-11-2010]
Other cataract[accessedResource: SNOMEDCT:193620000][accessDate: 04-11-2010]
GeneRIF:9813099
Other cataract NOS[accessedResource: SNOMEDCT:193622008][accessDate: 04-11-2010]
Cataract form (observable entity)[accessedResource: SNOMEDCT:247053007][accessDate: 04-11-2010]
Unspecified cataract[accessedResource: ICD9:366.9][accessDate: 04-11-2010]
SNOMEDCT:247053007
SNOMEDCT:128306009
NCIt:C26713
Cataract associated with other syndromes[accessedResource: SNOMEDCT:193608008][accessDate: 04-11-2010]
Cataract form
GeneRIF:15286169
GeneRIF:11955914
Unspecified cataract
Other cataract NOS (disorder)
SNOMEDCT:193570009
CATARACT W RADIATION
Lens opacity
cataract
GeneRIF:12360425
Cataract associated with radiation and other physical influences
GeneRIF:15041957
Cataract associated with other syndromes (disorder)
GeneRIF:12356818
GeneRIF:11904300
Cataract associated with other syndromes (disorder)[accessedResource: SNOMEDCT:193608008][accessDate: 04-11-2010]
Cataract form[accessedResource: SNOMEDCT:247053007][accessDate: 04-11-2010]
Cataract (disorder)
GeneRIF:15623749
Other cataract (disorder)
Other cataract NOS (disorder)[accessedResource: SNOMEDCT:193622008][accessDate: 04-11-2010]
GeneRIF:15004872
SNOMEDCT:193608008
Cataract NOS (disorder)[accessedResource: SNOMEDCT:193623003][accessDate: 04-11-2010]
GeneRIF:15249368
Partial or complete opacity of the crystalline lens of one or both eyes that decreases visual acuity and eventually results in blindness. Some cataracts appear in infancy or in childhood, but most develop in older individuals. (Sternberg Diagnostic Surgical Pathology, 3rd ed.)
ICD9:366.44
DOID:83
ICD9:366.8
Cataract form (observable entity)
Cataract (disorder)[accessedResource: SNOMEDCT:193570009][accessDate: 04-11-2010]
Cataract associated with other disorders
Cataract (M-54510)
Lens opacity[accessedResource: SNOMEDCT:193570009][accessDate: 04-11-2010]
SNOMEDCT:193622008
Cataract NOS[accessedResource: SNOMEDCT:193623003][accessDate: 04-11-2010]
ICD9:366.9
GeneRIF:15064679
GeneRIF:15342707
CATARACT W SYNDROME NEC
GeneRIF:12475213
GeneRIF:15101113
Partial or complete opacity of the crystalline lens of one or both eyes that decreases visual acuity and eventually results in blindness. Some cataracts appear in infancy or in childhood, but most develop in older individuals. (Sternberg Diagnostic Surgical Pathology, 3rd ed.)[accessedResource: NCIt:C26713][accessDate: 04-11-2010]
CATARACT NEC[accessedResource: ICD9:366.8][accessDate: 04-11-2010]
GeneRIF:11864421
GeneRIF:12944971
Cataract NOS (disorder)
Other cataract NOS
Cataract associated with other disorders[accessedResource: ICD9:366.4][accessDate: 04-11-2010]
GeneRIF:16310481
Lenticular opacity[accessedResource: SNOMEDCT:193570009][accessDate: 04-11-2010]
Cataract (morphologic abnormality)
GeneRIF:15570218
GeneRIF:16179416
Cataract NOS
Other cataract
CATARACT W SYNDROME NEC[accessedResource: ICD9:366.44][accessDate: 04-11-2010]
James Malone
TBP-71Q-16 is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/008216.html
TBP-71Q-16
JAX:008216
redundant now and is synonymous to material type.
population of an organism, organism, organism part, cell
true
Controlled terms for the state of the BioMaterial. Each state (BioSource, different BioSamples, and LabeledExtract) have MaterialTypes. Examples are population of an organism, organism, organism part, cell
obsolete_material type
antEndoP2[accessedResource: FBbt:00005524][accessDate: 04-11-2010]
James Malone
anterior endoderm primordium
FBbt:00005524
antEndoP2
Natural Language Generator 8th April 2010
A GM19239 is a cell line.
A GM19239 is all of the following: something that has as quality a male, something that derives from a Homo sapiens, and something that derives from a b cell.
GM19239
James Malone
An organic heterooctacyclic compound that has formula C28H26N4O3.
CHEBI:15738
Staurosporin
C28H26N4O3
http://www.ebi.ac.uk/efo/EFO_0001613
staurosporine
CN[C@@H]1C[C@H]2O[C@@](C)([C@@H]1OC)n1c3ccccc3c3c4CNC(=O)c4c4c5ccccc5n2c4c13
InChIKey=HKSZLNNOFSGOKW-PULLEYNNDJ
InChI=1/C28H26N4O3/c1-28-26(34-3)17(29-2)12-20(35-28)31-18-10-6-4-8-14(18)22-23-16(13-30-27(23)33)21-15-9-5-7-11-19(15)32(28)25(21)24(22)31/h4-11,17,20,26,29H,12-13H2,1-3H3,(H,30,33)/t17-,20-,26-,28+/m1/s1/f/h30H
(5S,6R,7R,9R)-6-methoxy-5-methyl-7-methylamino-6,7,8,9,15,16-hexahydro-5H,14H-5,9-epoxy-4b,9a,15-triazadibenzo[b,h]cyclonona[1,2,3,4-jkl]cyclopenta[e]-as-indacen-14-one
An indolocarbazole alkaloid that has formula C28H26N4O3.
James Malone
A cell of the outer layer of a blastula that gives rise to the ectoderm after gastrulation.[accessedResource: CL:0000352][accessDate: 04-11-2010]
ES cell[accessedResource: BTO:0001086][accessDate: 04-11-2010]
epiblast cell
ES cell
CL:0000352
BTO:0001086
Totipotent cell cultured from early embryo. Have the advantage that following modification in vitrothey can be used to produce chimeric embryos and thus transgenic animals.
James Malone
Totipotent cell cultured from early embryo. Have the advantage that following modification in vitrothey can be used to produce chimeric embryos and thus transgenic animals.[accessedResource: BTO:0001086][accessDate: 04-11-2010]
embryonic stem cell
A cell of the outer layer of a blastula that gives rise to the ectoderm after gastrulation.
epiblast cell[accessedResource: CL:0000352][accessDate: 04-11-2010]
James Malone
monophasic sarcoma of the synovium[accessedResource: DOID:5495][accessDate: 04-11-2010]
NCIt:C6534
A synovial sarcoma characterized by the presence of an epithelial or a spindle cell component only.
DOID:5495
A synovial sarcoma characterized by the presence of an epithelial or a spindle cell component only.[accessedResource: NCIt:C6534][accessDate: 04-11-2010]
monophasic synovial sarcoma
Monophasic sarcoma of Synovium[accessedResource: DOID:5495][accessDate: 04-11-2010]
Monophasic sarcoma of Synovium
monophasic sarcoma of the synovium
Ele Holloway
James Malone
HT
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#normalization_testing_design[accessedResource: MO_729][accessDate: 04-11-2010]
Tomasz Adamusiak
normalization testing design
MO_729
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#normalization_testing_design
James Malone
segmentation 26+ somites
ZFS:0000028
breast cancer cell line
Ele Holloway
James Malone
MHHPREB1
James Malone
http://www.ebi.ac.uk/efo/EFO_0001441
A realizable entity [snap:RealizableEntity] the manifestation of which is an essentially end-directed activity of a continuant [snap:Continuant] entity in virtue of that continuant [snap:Continuant] entity being a specific kind of entity in the kind or kinds of contexts that it is made for.
true
A function is an entity which is an essentially end-directed activity of a material entity in virtue of that entity being a specific kind of entity in the kind or kinds of contexts that it is made for. For example,
function
BFO:function
A sulfone that has formula C17H14O4S.
http://www.ebi.ac.uk/efo/EFO_0001604
Vioxx
A butenolide that has formula C17H14O4S.
CS(=O)(=O)c1ccc(cc1)C1=C(C(=O)OC1)c1ccccc1
Ceoxx
InChIKey=RZJQGNCSTQAWON-UHFFFAOYAR
CHEBI:8887
4-[4-(methylsulfonyl)phenyl]-3-phenyl-2(5H)-furanone
rofecoxib
InChI=1/C17H14O4S/c1-22(19,20)14-9-7-12(8-10-14)15-11-21-17(18)16(15)13-5-3-2-4-6-13/h2-10H,11H2,1H3
C17H14O4S
4-[4-(methylsulfonyl)phenyl]-3-phenylfuran-2(5H)-one
Tomasz Adamusiak
tropanyl 3,5-dimethylbenzoate
Ele Holloway
DSSTox_CID:22618
James Malone
DSSTox_Generic_SID:42618
STRUCTURE_Formula:C17H23NO2
CASRN:85181-40-4
STRUCTURE_ChemicalName_IUPAC:(1R,5S)-8-methyl-8-azabicyclo[3.2.1]oct-3-yl 3,5-dimethylbenzoate
7,12-dimethylbenz(a)anthracene
20510
510
57-97-6
7,12-dimethyltetraphene
C20H16
DMBA
James Malone
CS57628 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158652&type=germplasm
CS57628
http://www.arabidopsis.org/servlets/TairObject?id=1005158652&type=germplasm
nodule[accessedResource: BTO:0001190][accessDate: 04-11-2010]
MAT:0000353
root nodule
nodule
Gall-like structures on the roots of legumes that contain symbiotic nitrogen-fixing bacteria.
James Malone
BTO:0001190
Gall-like structures on the roots of legumes that contain symbiotic nitrogen-fixing bacteria.[accessedResource: BTO:0001190][accessDate: 04-11-2010]
PO:0003023
James Malone
GM12875
BTO:0001435
A human upper limb; especially: the part between the shoulder and the wrist.
A human upper limb; especially: the part between the shoulder and the wrist.[accessedResource: BTO:0001435][accessDate: 04-11-2010]
NCIt:C32141
James Malone
The portion of the upper extremity between the shoulder and the elbow. For clinical purposes this term is also used to refer to the whole superior limb.
The portion of the upper extremity between the shoulder and the elbow. For clinical purposes this term is also used to refer to the whole superior limb.[accessedResource: NCIt:C32141][accessDate: 04-11-2010]
arm
James Malone
A type of malignant cancer that arises from epithelial cells tending to infiltrate the surrounding tissues and give rise to metastases.
carcinoma
Tomasz Adamusiak
somite 3
ZFA:0000732
Tomasz Adamusiak
superficial blastomere
ZFA:0001484
sphingosine 1-phosphate
(2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate
26993-30-6
37166
C18H38NO5P
HCC38
James Malone
STRUCTURE_ChemicalName_IUPAC:(3E)-3,7-dimethylocta-1,3,6-triene
James Malone
CASRN:3779-61-1
DSSTox_Generic_SID:40567
Ele Holloway
ocimene
DSSTox_CID:20567
Tomasz Adamusiak
STRUCTURE_Formula:C10H16
GeneRIF:15797963
GeneRIF:12207164
GeneRIF:12230824
GeneRIF:12783844
GeneRIF:15281346
GeneRIF:15156314
GeneRIF:15173029
GeneRIF:14716305
GeneRIF:16260427
GeneRIF:15355441
GeneRIF:14675060
GeneRIF:15699512
Diabetes mellitus, NOS
GeneRIF:15646011
GeneRIF:12920574
GeneRIF:15258348
GeneRIF:16002993
GeneRIF:12753312
GeneRIF:11875060
GeneRIF:12574207
diabetes mellitus
GeneRIF:12787913
GeneRIF:15156315
GeneRIF:12039697
GeneRIF:12738401
GeneRIF:12673582
GeneRIF:14658759
GeneRIF:12679462
GeneRIF:12639765
GeneRIF:15166380
GeneRIF:12095538
GeneRIF:15221640
GeneRIF:11668623
GeneRIF:15237707
GeneRIF:11888844
Diabetes mellitus (disorder)[accessedResource: DOID:9351][accessDate: 04-11-2010]
ICD9:250
GeneRIF:14714273
GeneRIF:11912494
GeneRIF:12062854
GeneRIF:12649573
GeneRIF:12536206
GeneRIF:12738397
GeneRIF:15940393
Diabetes NOS
GeneRIF:14766207
GeneRIF:12221327
GeneRIF:14998943
GeneRIF:12706323
GeneRIF:12027924
GeneRIF:15251864
GeneRIF:12021129
GeneRIF:15831366
GeneRIF:12490143
GeneRIF:12618277
NCIt:C2985
GeneRIF:11896938
GeneRIF:12012276
GeneRIF:12200076
GeneRIF:15887858
GeneRIF:14654370
GeneRIF:15123681
A metabolic disorder characterized by abnormally high blood sugar levels due to diminished production of insulin or insulin resistance/desensitization.
GeneRIF:15112906
A heterogeneous group of disorders characterized by HYPERGLYCEMIA and GLUCOSE INTOLERANCE.
GeneRIF:12589429
GeneRIF:11947965
GeneRIF:15070960
GeneRIF:11916624
GeneRIF:15126243
GeneRIF:11938023
Diabetes[accessedResource: NCIt:C2985][accessDate: 04-11-2010]
GeneRIF:12529387
DOID:9351
GeneRIF:12679473
GeneRIF:11916625
GeneRIF:15662218
GeneRIF:15800961
MSH:D003920
Diabetes
GeneRIF:14674716
Diabetes mellitus, NOS[accessedResource: SNOMEDCT:73211009][accessDate: 04-11-2010]
GeneRIF:12748907
GeneRIF:15639198
Diabetes mellitus (disorder)
GeneRIF:15699509
GeneRIF:11796176
GeneRIF:15625086
GeneRIF:15699510
A metabolic disorder characterized by abnormally high blood sugar levels due to diminished production of insulin or insulin resistance/desensitization.[accessedResource: NCIt:C2985][accessDate: 04-11-2010]
GeneRIF:15367890
GeneRIF:12118252
GeneRIF:15609025
GeneRIF:15790730
GeneRIF:12148086
GeneRIF:15554360
GeneRIF:15699497
GeneRIF:12021133
GeneRIF:14726620
GeneRIF:15046742
GeneRIF:12062816
GeneRIF:15128745
GeneRIF:15476949
GeneRIF:15699513
GeneRIF:15699511
GeneRIF:15557196
GeneRIF:15286433
DM - Diabetes mellitus[accessedResource: SNOMEDCT:73211009][accessDate: 04-11-2010]
GeneRIF:14764811
GeneRIF:16087164
GeneRIF:12584444
GeneRIF:14641003
SNOMEDCT:73211009
GeneRIF:11882518
DM - Diabetes mellitus
GeneRIF:15516784
GeneRIF:11774208
GeneRIF:12955714
GeneRIF:15538935
GeneRIF:15563983
GeneRIF:15959417
GeneRIF:12898475
GeneRIF:12719374
A heterogeneous group of disorders characterized by HYPERGLYCEMIA and GLUCOSE INTOLERANCE.[accessedResource: MSH:D003920][accessDate: 04-11-2010]
GeneRIF:12500218
GeneRIF:11822825
James Malone
GeneRIF:14631138
GeneRIF:16098926
Diabetes NOS[accessedResource: DOID:9351][accessDate: 04-11-2010]
GeneRIF:11980626
GeneRIF:12765847
Ele Holloway
James Malone
C3A
hexachlorobenzene
118-74-1
20682
682
C6Cl6
hexachlorobenzene
HCB
Hemorrhages, Brain[accessedResource: MSH:D020300][accessDate: 04-11-2010]
DOID:1126
intracranial Hemorrhages[accessedResource: DOID:1126][accessDate: 04-11-2010]
Hemorrhage, Posterior Fossa[accessedResource: MSH:D020300][accessDate: 04-11-2010]
intracranial hemorrhage NOS
MSH:D020300
intracranial hemorrhage NOS (disorder)
Intracranial haemorrhage[accessedResource: SNOMEDCT:1386000][accessDate: 04-11-2010]
Bleeding within the SKULL, including hemorrhages in the brain and the three membranes of MENINGES. The escape of blood often leads to the formation of HEMATOMA in the cranial epidural, subdural, and subarachnoid spaces.[accessedResource: MSH:D020300][accessDate: 04-11-2010]
Intracranial haemorrhage
Intracranial haemorrhage NOS[accessedResource: SNOMEDCT:195178005][accessDate: 04-11-2010]
Posterior Fossa Hemorrhage
HEMORRHAGE INTRACRANIAL
Hemorrhages, Brain
Hemorrhages, Intracranial
Brain Hemorrhage[accessedResource: MSH:D020300][accessDate: 04-11-2010]
SNOMEDCT:1386000
intracranial hemorrhage (disorder)
Intracranial haemorrhage NOS
Unspecified intracranial hemorrhage
SNOMEDCT:195178005
Hemorrhages, Posterior Fossa[accessedResource: MSH:D020300][accessDate: 04-11-2010]
Hemorrhages, Posterior Fossa
Intracranial hemorrhage (disorder)[accessedResource: SNOMEDCT:1386000][accessDate: 04-11-2010]
INTRACRANIAL HEMORR NOS[accessedResource: ICD9:432.9][accessDate: 04-11-2010]
GeneRIF:15331795
ICD9:432.9
James Malone
Unspecified intracranial hemorrhage[accessedResource: DOID:1126][accessDate: 04-11-2010]
Hemorrhage, Brain
INTRACRANIAL HEMORR NOS
Bleeding within the SKULL, including hemorrhages in the brain and the three membranes of MENINGES. The escape of blood often leads to the formation of HEMATOMA in the cranial epidural, subdural, and subarachnoid spaces.
Intracranial hemorrhage NOS (disorder)[accessedResource: SNOMEDCT:195178005][accessDate: 04-11-2010]
Intracranial hemorrhage[accessedResource: SNOMEDCT:1386000][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#biomaterial_provider[accessedResource: MO_591][accessDate: 04-11-2010]
Tomasz Adamusiak
biomaterial provider
MO_591
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#biomaterial_provider
Ele Holloway
James Malone
HPL1
zinc sulfate
20315
40315
7733-02-0
O4SZn
zinc sulfate
A cultivated plant variety selected and given a name because it has desirable characteristics that distinguish it from otherwise similar plants of the same species.
2.4
obsolete_cultivar
using strain to hang cultivar subclasses in future
James Malone
Tomasz Adamusiak
true
MO_124
Jie Zheng
Ele Holloway
James Malone
ChaGoK1
Glioblastomas[accessedResource: MSH:D005909][accessDate: 10-05-2010]
Glioblastoma[accessedResource: MSH:D005909][accessDate: 10-05-2010]
Monstrocellular sarcoma [obs][accessedResource: DOID:3074][accessDate: 10-05-2010]
Giant cell glioblastoma
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures.[accessedResource: MSH:D005909][accessDate: 10-05-2010]
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures.
Giant cell glioblastoma (morphologic abnormality)[accessedResource: SNOMEDCT:44529004][accessDate: 10-05-2010]
Glioblastomas
A rare histological variant of glioblastoma (WHO grade IV) with a predominance of bizarre, multinucleated giant cells, an occasionally abundant stromal reticulin network, and a high frequency of TP53 mutations. (WHO)
Grade IV Astrocytoma[accessedResource: MSH:D005909][accessDate: 10-05-2010]
NCIt:C4325
Astrocytoma, Grade IV
obsolete_brain tumor glioblastoma
A rare histological variant of glioblastoma (WHO grade IV) with a predominance of bizarre, multinucleated giant cells, an occasionally abundant stromal reticulin network, and a high frequency of TP53 mutations. (WHO)[accessedResource: NCIt:C4325][accessDate: 10-05-2010]
Glioblastomas, Giant Cell[accessedResource: MSH:D005909][accessDate: 10-05-2010]
Glioblastoma
MSH:D005909
DOID:3074
Glioblastomas, Giant Cell
SNOMEDCT:44529004
Glioblastoma Multiforme[accessedResource: MSH:D005909][accessDate: 10-05-2010]
Grade IV Astrocytomas
Monstrocellular sarcoma [obs]
true
Giant cell glioblastoma (morphologic abnormality)
Astrocytomas, Grade IV[accessedResource: MSH:D005909][accessDate: 10-05-2010]
Glioblastoma Multiforme
Glioblastoma, Giant Cell[accessedResource: MSH:D005909][accessDate: 10-05-2010]
Tomasz Adamusiak
embryonic tracheole
FBbt:00005571
A group of cells at the tip of the stem and root that give rise by cell division to the primary tissues and are ultimately responsible for the structural organization of the entire primary plant body.[accessedResource: BTO:0000034][accessDate: 04-11-2010]
GRO:0000231[accessedResource: BTO:0000034][accessDate: 04-11-2010]
James Malone
A group of cells at the tip of the stem and root that give rise by cell division to the primary tissues and are ultimately responsible for the structural organization of the entire primary plant body.
apical meristem
BTO:0000034
GRO:0000231
James Malone
NCI-H1648
H1648
James Malone
cleavage 4-cell
ZFS:0000003
mixed sex
mixed sex[accessedResource: PATO:0001338][accessDate: 04-11-2010]
The total number of individuals inhabiting a particular region or area.
A biological sex quality inhering in a population of multiple sexes.[accessedResource: PATO:0001338][accessDate: 04-11-2010]
James Malone
mixed sex population
PATO:0001338
A biological sex quality inhering in a population of multiple sexes.
retinal ganglion
use synonym chemical compound
true
obsolete_compound factor
James Malone
MAT:0000182
MA:0000293
pelvic girdle
FMAID:16581
EMAPA:18028
Subdivision of free lower limb, which is the proximal segment of a lower limb and links the free lower limb to the trunk; it is demarcated by the plane of the surface of the acetabular fossa from the free lower limb; together with the free lower limb, it constitutes the lower limb. Examples: There are only two instances, right and left pelvic girdles.
EHDAA:7149
Ele Holloway
James Malone
CORL279
Ele Holloway
James Malone
MS-1
JCRB1081
MS-1-L
HTB-119
H69 cell[accessedResource: BTO:0000679][accessDate: 04-11-2010]
Ele Holloway
Human Caucasian lung small cell carcinoma cell line.[accessedResource: BTO:0000679][accessDate: 04-11-2010]
BTO:0000679
H69 cell
Human Caucasian lung small cell carcinoma cell line.
H69
James Malone
An HIV-like virus that infects monkeys, chimpanzees, and other non-human primates. (AIDS Info HIV Glossary)[accessedResource: NCIt:C14274][accessDate: 04-11-2010]
SIV[accessedResource: NCIt:C14274][accessDate: 04-11-2010]
James Malone
An HIV-like virus that infects monkeys, chimpanzees, and other non-human primates. (AIDS Info HIV Glossary)
simian immunodeficiency virus
NCIt:C14274
SIV
An undifferentiated fibroblast that can be stimulated to form a fat cell.[accessedResource: CL:0002334][accessDate: 04-11-2010]
A precursor to an adipocyte.[accessedResource: BTO:0001107][accessDate: 04-11-2010]
preadipocyte
Tomasz Adamusiak
An undifferentiated fibroblast that can be stimulated to form a fat cell.
A precursor to an adipocyte.
James Malone
BTO:0001107
CL:0002334
Tomasz Adamusiak
embryonic hindgut
FBbt:00005630
James Malone
A measurement of the survival rate for a group of individuals suffering from a disease.
overall survival
Tomasz Adamusiak
presumptive dorsal mesoderm
ZFA:0000265
James Malone
white fat
MA:0000058
MAT:0000199
fibrosarcoma
amphotericin B
1397-89-3
Tomasz Adamusiak
spina bifida
HP:0002414
James Malone
DSSTox_CID:42607
DSSTox_Generic_SID:C16H17Cl2NO3
CASRN:181217-39-0
Tomasz Adamusiak
fenoldopam hydrochloride
Ele Holloway
STRUCTURE_Formula:6-chloro-1-(4-hydroxyphenyl)-2,3,4,5-tetrahydro-1H-3-benzazepine-7,8-diol hydrochloride
Ele Holloway
James Malone
NCI-H441
Ele Holloway
James Malone
HOS
acidum valproicum
dipropylacetic acid
valproic acid
InChI=1/C8H16O2/c1-3-5-7(6-4-2)8(9)10/h7H,3-6H2,1-2H3,(H,9,10)/f/h9H
4-heptanecarboxylic acid
di-n-propylacetic acid
InChIKey=NIJJYAXOARWZEE-BGGKNDAXCP
2-n-propyl-n-valeric acid
James Malone
C8H16O2
Di-n-propylessigsaeure
http://www.ebi.ac.uk/efo/EFO_0001634
acide valproique
2-propylvaleric acid
DPA
Depakene
n-DPA
2-propylpentanoic acid
Valproinsaeure
CCCC(CCC)C(O)=O
acido valproico
CHEBI:39867
2-PROPYL-PENTANOIC ACID
A monocarboxylic acid that has formula C8H16O2.
Antebrachial region[accessedResource: FMAID:9663][accessDate: 04-11-2010]
Intermediate segment of free upper limb[accessedResource: FMAID:9663][accessDate: 04-11-2010]
Tomasz Adamusiak
forearm
FMAID:9663
Antebrachial region
Intermediate segment of free upper limb
James Malone
SUM1315MO2
A mannitol that has formula C6H14O6.
(2R,3R,4R,5R)-hexane-1,2,3,4,5,6-hexol
The D-enantiomer of mannitol.
James Malone
InChI=1/C6H14O6/c7-1-3(9)5(11)6(12)4(10)2-8/h3-12H,1-2H2/t3-,4-,5-,6-/m1/s1
mannitol
Osmitrol
CHEBI:16899
http://www.ebi.ac.uk/efo/EFO_0001525
C6H14O6
InChIKey=FBPFZTCFMRRESA-KVTDHHQDBH
OC[C@@H](O)[C@@H](O)[C@H](O)[C@H](O)CO
D-mannitol
(2R,3R,4R,5R)-Hexane-1,2,3,4,5,6-hexaol
James Malone
HCC2185
antilipemic
hypolipidemic agent
antilipemic drugs
A substance used to treat hyperlipidemia (an excess of lipids in the blood).
http://www.ebi.ac.uk/efo/EFO_0001851
CHEBI:35679
antihyperlipemic
James Malone
antihyperlipidemic
antilipemic drug
Ele Holloway
James Malone
BHT101
A malignant neoplasm in which new abnormal tissue grow by excessive cellular division and proliferation more rapidly than normal and continues to grow after the stimuli that initiated the new growth cease.
Tomasz Adamusiak
NIFSTD:birnlex_406
malignant neoplasia
James Malone
true
malignant tumor
cancer
ductal carcinoma in situ
malignant tumour
dermal system
organ system[accessedResource: FBbt:00004856][accessDate: 04-11-2010]
Integumentary system[accessedResource: FMAID:72979][accessDate: 04-11-2010]
AAO:0000239
organ system
epithelial system - sensu C elegans[accessedResource: MAT:0000033][accessDate: 04-11-2010]
tegument
MA:0000014
EMAPA:17524
epithelial system - sensu C elegans
The taxon-independent term for the outer covering of an organism
TADS:0000108
FBbt:00004856
A division of the whole organism into specialized systems.[accessedResource: FBbt:00004856][accessDate: 04-11-2010]
EHDAA:6520
Something that covers or encloses; especially: an enveloping layer (as a skin, membrane, or husk) of an organism or one of its parts.[accessedResource: BTO:0000634][accessDate: 04-11-2010]
James Malone
MAT:0000033
EV:0100151
tegument[accessedResource: BTO:0000634][accessDate: 04-11-2010]
A division of the whole organism into specialized systems.
Integumentary system
integument
BTO:0000634
integument[accessedResource: BTO:0000634][accessDate: 04-11-2010]
Something that covers or encloses; especially: an enveloping layer (as a skin, membrane, or husk) of an organism or one of its parts.
WBbt:0005730
The taxon-independent term for the outer covering of an organism[accessedResource: MAT:0000033][accessDate: 04-11-2010]
XAO:0000176
dermal system[accessedResource: MAT:0000033][accessDate: 04-11-2010]
integumental system
FMAID:72979
bortezomib
179324-69-7
40980
C19H25BN4O4
N-[(1R)-1-(dihydroxyboranyl)-3-methylbutyl]-Nalpha-(pyrazin-2-ylcarbonyl)-L-phenylalaninamide
atorvastatin
(3R,5R)-7-[3-(anilinocarbonyl)-5-(4-fluorophenyl)-2-isopropyl-4-phenyl-1H-pyrrol-1-yl]-3,5-dihydroxyheptanoic acid
134523-00-5
29868
9868
C33H35FN2O5
The part of organism's anatomy or substance arising from an organism from which the biomaterial was derived, excludes cells. E.g. tissue, organ, system, sperm, blood or body location (arm).
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#organism_part
MO_954
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#organism_part[accessedResource: MO_954][accessDate: 04-11-2010]
tissue, organ, system, sperm, blood or body location (arm).
true
Jie Zheng
James Malone
Tomasz Adamusiak
organism part
SUM225CWN
James Malone
James Malone
GM12248
Ele Holloway
James Malone
ML2
Rat[accessedResource: NIFSTD:birnlex_160][accessDate: 04-11-2010]
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001995
Rattus
NIFSTD:birnlex_160
Mammals, Rats
rat
Tomasz Adamusiak
hypochord
ZFA:0000031
formaldehyde
Methylene oxide
[H]C([H])=O
An aldehyde that has formula CH2O.
InChI=1/CH2O/c1-2/h1H2
http://www.ebi.ac.uk/efo/EFO_0001538
CH2O
FORMALIN
The simplest aldehyde.
Oxomethylene
Methanal
InChIKey=WSFSSNUMVMOOMR-UHFFFAOYAT
CHEBI:16842
Oxomethane
Formaldehyd
eugenol
20617
4-allyl-2-methoxyphenol
617
97-53-0
C10H12O2
GeneRIF:15746194
SNOMEDCT:129103003
GeneRIF:15879464
GeneRIF:16024248
GeneRIF:11925378
ICD9:617.9
GeneRIF:11994543
GeneRIF:15472211
GeneRIF:15044605
Endometriosis (disorder)
GeneRIF:15820794
GeneRIF:12571184
Endometriosis (disorder)[accessedResource: SNOMEDCT:129103003][accessDate: 04-11-2010]
GeneRIF:15212671
GeneRIF:15105396
Endometriosis NOS (disorder)[accessedResource: SNOMEDCT:198259004][accessDate: 04-11-2010]
Endometriosis NOS
GeneRIF:12594002
GeneRIF:14556808
GeneRIF:12012624
Endometriosis NOS (disorder)
GeneRIF:15878920
GeneRIF:11716965
GeneRIF:16098858
Endometriosis of other specified sites
GeneRIF:15979997
Endometriosis (morphologic abnormality)[accessedResource: SNOMEDCT:396224008][accessDate: 04-11-2010]
SNOMEDCT:396224008
GeneRIF:15319381
GeneRIF:12009356
GeneRIF:15212674
GeneRIF:15120698
GeneRIF:15861041
ENDOMETRIOSIS NOS[accessedResource: ICD9:617.9][accessDate: 04-11-2010]
GeneRIF:15602080
GeneRIF:12034345
GeneRIF:15820792
GeneRIF:12200463
GeneRIF:11883743
GeneRIF:15531592
GeneRIF:15193490
GeneRIF:15705625
GeneRIF:12832381
GeneRIF:14667896
GeneRIF:12587534
GeneRIF:15755869
GeneRIF:15588473
GeneRIF:11963839
GeneRIF:12837926
GeneRIF:16169423
GeneRIF:12372466
GeneRIF:14764801
GeneRIF:12372460
GeneRIF:14967364
GeneRIF:12372458
GeneRIF:15059587
GeneRIF:16192641
GeneRIF:14998974
GeneRIF:15166129
GeneRIF:11870103
GeneRIF:15589849
GeneRIF:16006475
GeneRIF:12112590
Endometriosis of other specified sites[accessedResource: ICD9:617.8][accessDate: 04-11-2010]
GeneRIF:15166131
Endometriosis (clinical)[accessedResource: SNOMEDCT:129103003][accessDate: 04-11-2010]
GeneRIF:12788899
GeneRIF:14667898
GeneRIF:11804955
GeneRIF:15734764
GeneRIF:12568865
DOID:289
GeneRIF:15236995
GeneRIF:12699881
GeneRIF:15950672
GeneRIF:16210018
GeneRIF:12517591
GeneRIF:15764806
ENDOMETRIOSIS NEC[accessedResource: ICD9:617.8][accessDate: 04-11-2010]
GeneRIF:11968047
James Malone
endometriosis
GeneRIF:14644829
GeneRIF:15302278
GeneRIF:14980314
GeneRIF:12372468
GeneRIF:15083380
GeneRIF:15126568
GeneRIF:11756572
GeneRIF:12525458
GeneRIF:12620489
GeneRIF:15665016
GeneRIF:15866595
Endometriosis, site unspecified
GeneRIF:14506926
GeneRIF:14505259
Endometriosis (morphologic abnormality)
GeneRIF:15618253
GeneRIF:15533352
GeneRIF:15242994
GeneRIF:14645176
GeneRIF:15640252
GeneRIF:15749523
GeneRIF:12062821
The growth of functional endometrial tissue in anatomic sites outside the uterine body. It most often occurs in the pelvic organs.[accessedResource: NCIt:C3014][accessDate: 04-11-2010]
Endometriosis, site unspecified[accessedResource: ICD9:617.9][accessDate: 04-11-2010]
GeneRIF:15749482
SNOMEDCT:198259004
GeneRIF:12773447
GeneRIF:12297480
GeneRIF:12571183
ENDOMETRIOSIS NEC
GeneRIF:16084889
GeneRIF:12529420
ICD9:617
GeneRIF:16144297
Endometriosis (clinical)
GeneRIF:15979990
GeneRIF:16084898
GeneRIF:12700072
ICD9:617.8
GeneRIF:15613411
GeneRIF:12042273
NCIt:C3014
GeneRIF:15120697
GeneRIF:14989983
The growth of functional endometrial tissue in anatomic sites outside the uterine body. It most often occurs in the pelvic organs.
Tomasz Adamusiak
ventral wall of dorsal aorta
ZFA:0005028
alpha-p-Chlorophenoxyisobutyryl ethyl ester
clofibrato
CHEBI:3750
Atromid-S
EPIB
InChIKey=KNHUKKLJHYUCFP-UHFFFAOYAE
InChI=1/C12H15ClO3/c1-4-15-11(14)12(2,3)16-10-7-5-9(13)6-8-10/h5-8H,4H2,1-3H3
ethyl 2-(4-chlorophenoxy)-2-methylpropanoate
Ethyl 2-(p-chlorophenoxy)isobutyrate
C12H15ClO3
Ethyl chlorophenoxyisobutyrate
alpha-(p-Chlorophenoxy)isobutyric acid, ethyl ester
clofibrate
A propanoate ester that has formula C12H15ClO3.
clofibratum
2-(p-Chlorophenoxy)-2-methylpropionic acid ethyl ester
ELPI
CCOC(=O)C(C)(C)Oc1ccc(Cl)cc1
Liprin
Ethyl clofibrate
http://www.ebi.ac.uk/efo/EFO_0001508
2-(4-Chlorophenoxy)-2-methylpropanoic acid ethyl ester
Lipofacton
M1 Acute Myeloid Leukemia without Maturation
M1 Acute Myeloid Leukemia
FAB M1
Acute Myelogenous Leukemia without Maturation
M1 Acute Myelocytic Leukemia
Acute Myeloid Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Myeloblastic Leukemia without Maturation
AML without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
Acute Granulocytic Leukemia without Maturation
acute myeloblastic leukemia without maturation
Acute Myelocytic Leukemia without Maturation
M1 Acute Myeloid Leukemia[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
An acute myeloid leukemia (AML) characterized by blasts without evidence of maturation to more mature neutrophils. The patients present with anemia, neutropenia, and thrombocytopenia. This type of AML usually follows an aggressive clinical course. (WHO, 2001)
An acute myeloid leukemia (AML) characterized by blasts without evidence of maturation to more mature neutrophils. The patients present with anemia, neutropenia, and thrombocytopenia. This type of AML usually follows an aggressive clinical course. (WHO, 2001)[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Granulocytic Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Myelocytic Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
Acute Myelogenous Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Myelogenous Leukemia without Maturation
M1 Acute Myelogenous Leukemia[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Myeloblastic Leukemia[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
Acute Myeloid Leukemia without Maturation (FAB M1)
Acute Myeloid Leukemia without Maturation (FAB M1)[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Granulocytic Leukemia[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Myeloblastic Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Myelocytic Leukemia[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Granulocytic Leukemia
M1 Acute Granulocytic Leukemia without Maturation
Acute Myeloid Leukemia without Maturation
Acute Myelocytic Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Myelogenous Leukemia
M1 Acute Myelocytic Leukemia without Maturation
Tomasz Adamusiak
FAB M1[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Myeloblastic Leukemia
M1 Acute Myelogenous Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
M1 Acute Myeloid Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
NCIt:C3249
AML without Maturation
Acute Granulocytic Leukemia without Maturation[accessedResource: NCIt:C3249][accessDate: 04-11-2010]
James Malone
male germ cell
CL:0000015
testis - germ cell
Tomasz Adamusiak
fibula
FMAID:24479
neural stem cells experimentally derived from ES cells
embryonic stem cell derived neuronal stem cell
ES derived NSC
Tomasz Adamusiak
American
UMLS:C0596070
James Malone
BL41K3
Left ventricular noncompaction (disorder)[accessedResource: SNOMEDCT:427608000][accessDate: 04-11-2010]
Tomasz Adamusiak
left ventricular noncompaction
SNOMEDCT:427608000
Left ventricular noncompaction (disorder)
Jie Zheng
Tomasz Adamusiak
Nonobese diabetic (NOD) mouse strain which is homozygous for the scid mutation.
NOD.scid
http://www.criver.com/fr-FR/ProdServ/ByType/ResModOver/ResMod/Pages/NOD_SCID_mouse_J.aspx
https://www.cbil.upenn.edu/RADQuerier/php/sampleInfo.php?assay_id=10939&&study_id=3144
James Malone
CS57610 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158634&type=germplasm
CS57610
http://www.arabidopsis.org/servlets/TairObject?id=1005158634&type=germplasm
Ele Holloway
James Malone
Tomasz Adamusiak
anti-CD28
DSSTox_Generic_SID:40416
PO:0009029
James Malone
The floral organ that produces pollen; consisting of an anther and filament.
BTO:0001559
GRO:0005583[accessedResource: BTO:0001559][accessDate: 04-11-2010]
The floral organ that produces pollen; consisting of an anther and filament.[accessedResource: BTO:0001559][accessDate: 04-11-2010]
GRO:0005583
MAT:0000515
stamen
ZEA:0015134
Ele Holloway
James Malone
SW480
Jie Zheng
Tomasz Adamusiak
embryonic day 11.5
An autosomal dominant hereditary neoplastic syndrome. Two distinct clinicopathological entities are recognized: neurofibromatosis type 1 and neurofibromatosis type 2. Neurofibromatosis type 1 is associated with the presence of cafe-au-lait cutaneous lesions, multiple neurofibromas, malignant peripheral nerve sheath tumors, optic nerve gliomas, and bone lesions. Neurofibromatosis type 2 is associated with the presence of schwannomas, meningiomas, and gliomas.[accessedResource: NCIt:C6727][accessDate: 04-11-2010]
Tomasz Adamusiak
NCIt:C6727
neurofibromatosis
Neurofibromatosis (morphologic abnormality)
Neurofibromatosis (morphologic abnormality)[accessedResource: DOID:8712][accessDate: 04-11-2010]
Neurofibromatosis syndrome (disorder)
Neurofibromatosis syndrome (disorder)[accessedResource: DOID:8712][accessDate: 04-11-2010]
An autosomal dominant hereditary neoplastic syndrome. Two distinct clinicopathological entities are recognized: neurofibromatosis type 1 and neurofibromatosis type 2. Neurofibromatosis type 1 is associated with the presence of cafe-au-lait cutaneous lesions, multiple neurofibromas, malignant peripheral nerve sheath tumors, optic nerve gliomas, and bone lesions. Neurofibromatosis type 2 is associated with the presence of schwannomas, meningiomas, and gliomas.
DOID:8712
MA:0002716
The middle part of the limb (e.g. between the elbow and wrist)
middle part of limb
zeugopod
MAT:0000092
middle part of limb[accessedResource: MAT:0000092][accessDate: 04-11-2010]
James Malone
The middle part of the limb (e.g. between the elbow and wrist)[accessedResource: MAT:0000092][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0002637
Capra hircus
goat
Ele Holloway
James Malone
T84
James Malone
BT474
CHEBI:16914
o-carboxyphenol
2-carboxyphenol
http://www.ebi.ac.uk/efo/EFO_0001608
InChI=1/C7H6O3/c8-6-4-2-1-3-5(6)7(9)10/h1-4,8H,(H,9,10)/f/h9H
OC(=O)c1ccccc1O
A hydroxybenzoic acid that has formula C7H6O3.
James Malone
salicylic acid
2-hydroxybenzoic acid
ortho-Hydroxylated benzoic acid.
o-hydroxybenzoic acid
C7H6O3
InChIKey=YGSDEFSMJLZEOE-BGGKNDAXCM
bathocuproine disulfonate
James Malone
STRUCTURE_Formula:C26H20N2O6S2
Ele Holloway
DSSTox_Generic_SID:37643
Tomasz Adamusiak
DSSTox_CID:17643
bathocuproine disulfonate, copper chelator (BCS)
CASRN:73348-75-1
STRUCTURE_ChemicalName_IUPAC:4,4'-(2,9-dimethyl-1,10-phenanthroline-4,7-diyl)dibenzenesulfonic acid
MDAMB468
James Malone
Cocaine dependence, unspecified (disorder)[accessedResource: DOID:9975][accessDate: 04-11-2010]
Cocaine dependence, unspecified (disorder)
Cocaine Dependence[accessedResource: DOID:9975][accessDate: 04-11-2010]
Mental and behavioral disorder due to use of cocaine: dependence syndrome (disorder)
Cocaine dependence (disorder)[accessedResource: DOID:9975][accessDate: 04-11-2010]
Cocaine dependence
DOID:9975
Mental and behavioral disorder due to use of cocaine: dependence syndrome (disorder)[accessedResource: DOID:9975][accessDate: 04-11-2010]
Cocaine dependence, unspecified use
cocaine addiction
Cocaine drug dependence NOS (disorder)
Cocaine drug dependence NOS (disorder)[accessedResource: DOID:9975][accessDate: 04-11-2010]
Cocaine dependence (disorder)
Cocaine dependence, unspecified use[accessedResource: DOID:9975][accessDate: 04-11-2010]
Ele Holloway
Tomasz Adamusiak
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#fl
Jie Zheng
Tomasz Adamusiak
true
A femtoliter is a volume unit which is equal to 10^-15 L.
MO_721
A volume unit which is equal to 10^[-12] L.
femtoliter
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#fl[accessedResource: MO_721][accessDate: 04-11-2010]
fl
benzothiadiazole
Ele Holloway
CASRN:88495-63-0
artesunate
DSSTox_Generic_SID:42681
Tomasz Adamusiak
James Malone
DSSTox_CID:22681
STRUCTURE_Formula:C19H28O8
STRUCTURE_ChemicalName_IUPAC:3-({[(5aS,6R,8aS,9R,10R,12R,12aR)-3,6,9-trimethyldecahydro-3,12-epoxy[1,2]dioxepino[4,3-i]isochromen-10-yl]carbonyl}oxy)propanoic acid
An attomole is a substance unit equal to 10^-18 mol.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#amol[accessedResource: MO_977][accessDate: 04-11-2010]
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#amol
attomole
MO_977
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001793
amol
A substance unit equal to 10^[-18] mol.
true
James Malone
NIFSTD:birnlex_398
obsolete_C57BL/6
James Malone
Tomasz Adamusiak
duplicate of EFO_0000606
2.5
http://www.informatics.jax.org/external/festing/mouse/docs/C57BL.shtml
C57BL/6 is a mouse strain as described in Jackson Laboratory http://www.informatics.jax.org/external/festing/mouse/docs/C57BL.shtml
true
Ele Holloway
James Malone
YCC1
Human colon carcinoma cell line; established from the primary colon carcinoma of an adult man.[accessedResource: BTO:0002254][accessDate: 04-11-2010]
James Malone
Human colon carcinoma cell line; established from the primary colon carcinoma of an adult man.
HCT-116 cell[accessedResource: BTO:0002254][accessDate: 04-11-2010]
HCT116 cell[accessedResource: BTO:0002254][accessDate: 04-11-2010]
HCT116
Ele Holloway
HCT116 cell
BTO:0002254
HCT-116 cell
A group of dominantly inherited, predominatly late-onset, cerebellar ataxias which have been divided into multiple subtypes based on clinical features and genetic mapping. Progressive ataxia is a central feature of these conditions, and in certain subtypes POLYNEUROPATHY; DYSARTHRIA; visual loss; and other disorders may develop (MeSH).
DOID:1441
Spinocerebellar Ataxias
Dominantly-Inherited Spinocerebellar Ataxia[accessedResource: NIFSTD:birnlex_12648][accessDate: 04-11-2010]
Spinocerebellar ataxia (disorder)[accessedResource: DOID:1441][accessDate: 04-11-2010]
Spinocerebellar Atrophy[accessedResource: NIFSTD:birnlex_12648][accessDate: 04-11-2010]
Spinocerebellar Atrophy
NIFSTD:birnlex_12648
Spinocerebellar ataxia (disorder)
Ele Holloway
A group of dominantly inherited, predominatly late-onset, cerebellar ataxias which have been divided into multiple subtypes based on clinical features and genetic mapping. Progressive ataxia is a central feature of these conditions, and in certain subtypes POLYNEUROPATHY; DYSARTHRIA; visual loss; and other disorders may develop (MeSH).[accessedResource: NIFSTD:birnlex_12648][accessDate: 04-11-2010]
Tomasz Adamusiak
Dominantly-Inherited Spinocerebellar Ataxia
spinocerebellar ataxia
James Malone
CS57618 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158642&type=germplasm
CS57618
http://www.arabidopsis.org/servlets/TairObject?id=1005158642&type=germplasm
Tomasz Adamusiak
polster
ZFA:0000058
ampicillin
69-53-4
SNOMEDCT:16814004
MSH:D011008
pneumococcal infectious disease
STREP PNEUMONIAE INFECT[accessedResource: MSH:D011008][accessDate: 04-11-2010]
DOID:9805
Pneumococcal infectious disease (disorder)
Pneumococcal infectious disease (disorder)[accessedResource: SNOMEDCT:16814004][accessDate: 04-11-2010]
pneumoniae Infections, Streptococcus
Pneumococcal infectious disease[accessedResource: SNOMEDCT:16814004][accessDate: 04-11-2010]
James Malone
GeneRIF:12569171
Infections with bacteria of the species STREPTOCOCCUS PNEUMONIAE.
Pneumococcal infection, NOS[accessedResource: SNOMEDCT:16814004][accessDate: 04-11-2010]
Infections with bacteria of the species STREPTOCOCCUS PNEUMONIAE.[accessedResource: MSH:D011008][accessDate: 04-11-2010]
Pneumococcal infection, NOS
pneumoniae Infection, Streptococcus
Infection, Streptococcus pneumoniae[accessedResource: MSH:D011008][accessDate: 04-11-2010]
INFECT PNEUMOCOCCAL
Infections, Streptococcus pneumoniae[accessedResource: MSH:D011008][accessDate: 04-11-2010]
Pneumococcal infectious disease, NOS[accessedResource: SNOMEDCT:16814004][accessDate: 04-11-2010]
Pneumococcal infectious disease, NOS
PNEUMOCOCCAL INFECT[accessedResource: MSH:D011008][accessDate: 04-11-2010]
Pneumococcal Infections
Infections, Pneumococcal[accessedResource: MSH:D011008][accessDate: 04-11-2010]
STREP PNEUMONIAE INFECT
pneumococcal infection
Ele Holloway
James Malone
Capan1
Capan-1
Ele Holloway
James Malone
Tomasz Adamusiak
sulindac sulfone
CASRN:59973-80-7
exisulind
There is possible overlap here with sample and perhaps should be merged.
James Malone
The physical site from which tissue has been removed from a living organism. Does not imply any statistical significance, i.e. that it is a statistically representative sample of the whole.
biopsy site
James Malone
A dorsal fin
A geometric modifier is an anatomical modifier which describes some quality about the geometric position of some organism part.
geometric modifier
MAT:0000483
Ele Holloway
James Malone
D10.G4.1
James Malone
http://www.ebi.ac.uk/efo/EFO_0002648
Mus musculus musculus
Mus musculus hortulanus
eastern European house mouse
James Malone
segmentation 20-25 somites
ZFS:0000027
benzoic acid
143
20143
65-85-0
C7H6O2
benzoic acid
Tomasz Adamusiak
presumptive pronephric mesoderm
ZFA:0001070
James Malone
CS57627 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158651&type=germplasm
CS57627
http://www.arabidopsis.org/servlets/TairObject?id=1005158651&type=germplasm
Tomasz Adamusiak
A mass unit is a base unit which is a standard measure of the amount of matter/energy of a physical object.
James Malone
Jie Zheng
mass unit
MassUnitOther[accessedResource: MO_11][accessDate: 04-11-2010]
MO_149
MO_11
MassUnitOther
true
http://www.ebi.ac.uk/efo/EFO_0001679
A base unit which is a standard measure of the amount of matter/energy of a physical object.
Any of the blood cells that are colorless, lack hemoglobin, contain a nucleus, and include the lymphocytes, monocytes, neutrophils, eosinophils, and basophils.[accessedResource: BTO:0000751][accessDate: 04-11-2010]
CL:0000738
PMN cell
An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue.[accessedResource: CL:0000738][accessDate: 04-11-2010]
leucocyte[accessedResource: CL:0000738][accessDate: 04-11-2010]
polymorphonuclear cell
An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue.
leucocyte
white blood cell[accessedResource: CL:0000738][accessDate: 04-11-2010]
white blood cell
immune cell[accessedResource: CL:0000738][accessDate: 04-11-2010]
A nucleated cell of the myeloid or lymphoid lineages, found in blood or other tissue.
immune cell
PMN cell[accessedResource: BTO:0000751][accessDate: 04-11-2010]
James Malone
Any of the blood cells that are colorless, lack hemoglobin, contain a nucleus, and include the lymphocytes, monocytes, neutrophils, eosinophils, and basophils.
BTO:0000751
leukocyte
polymorphonuclear cell[accessedResource: BTO:0000751][accessDate: 04-11-2010]
Ele Holloway
James Malone
U266B1
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#liquid_handler[accessedResource: MO_868][accessDate: 04-11-2010]
liquid_handling_instrument
MO_868
http://www.ebi.ac.uk/efo/EFO_0002021
liquid handler
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#liquid_handler
James Malone
A liquid_handler is an instrument used for automated liquid transfer and handling.
James Malone
proximal tibia
Proximal is a geometric modifier describing the point at which an appendage joins the body or the point nearest to some point of origin, for example proximal tibia.
proximal
MAT:0000491
James Malone
Goto-Kakizaki is a rat strain as described in http://www.taconic.com/wmspage.cfm?parm1=757
Goto-Kakizaki
http://www.taconic.com/wmspage.cfm?parm1=757
Endocrine disorder NOS (disorder)[accessedResource: SNOMEDCT:190594008][accessDate: 04-11-2010]
ENDOCRINE DISORDERS
Disease of endocrine gland
SNOMEDCT:267489000
GeneRIF:15736104
Disorder of endocrine system
GeneRIF:15132716
GeneRIF:15240634
Disorder of endocrine system[accessedResource: SNOMEDCT:362969004][accessDate: 04-11-2010]
Hormone abnormality (finding)[accessedResource: SNOMEDCT:84452004][accessDate: 04-11-2010]
ENDOCRINE DISORDER NOS[accessedResource: ICD9:259.9][accessDate: 04-11-2010]
ENDOCRINE DISORDER NOS
ENDOCRINE SYSTEM DIS
Disorder of endocrine system (disorder)
Endocrine disease[accessedResource: SNOMEDCT:362969004][accessDate: 04-11-2010]
Endocrine Diseases
Endocrine disturbance NOS (disorder)[accessedResource: SNOMEDCT:267489000][accessDate: 04-11-2010]
endocrine system disease
Endocrine disturbance[accessedResource: SNOMEDCT:362969004][accessDate: 04-11-2010]
Non-Neoplastic Endocrine Disorder
SNOMEDCT:362969004
Hormone disturbance
Endocrine disturbance
Unspecified endocrine disorder
ENDOCRINE DIS[accessedResource: MSH:D004700][accessDate: 04-11-2010]
Endocrine System Diseases[accessedResource: MSH:D004700][accessDate: 04-11-2010]
Any deviation from the normal structure or function of the endocrine system that is manifested by a characteristic set of symptoms and signs.[accessedResource: NCIt:C3009][accessDate: 04-11-2010]
Diseases of Endocrine System
Disorder of endocrine gland[accessedResource: SNOMEDCT:362969004][accessDate: 04-11-2010]
Disease of endocrine gland[accessedResource: SNOMEDCT:362969004][accessDate: 04-11-2010]
NCIt:C3009
Hormone abnormality[accessedResource: SNOMEDCT:84452004][accessDate: 04-11-2010]
Endocrine Diseases and Manifestations[accessedResource: NCIt:C3009][accessDate: 04-11-2010]
Hormone abnormality (finding)
ICD9:259.9
Disorder of endocrine system (disorder)[accessedResource: SNOMEDCT:362969004][accessDate: 04-11-2010]
Hormone disorders
Diseases, Endocrine[accessedResource: MSH:D004700][accessDate: 04-11-2010]
Endocrine System Diseases
Endocrinopathy, NOS
James Malone
Endocrine disorder NOS (disorder)
Non-Neoplastic Endocrine Disorder[accessedResource: NCIt:C27565][accessDate: 04-11-2010]
Endocrine Diseases and Manifestations
DIS ENDOCRINE SYSTEM[accessedResource: MSH:D004700][accessDate: 04-11-2010]
Endocrine Disorder[accessedResource: NCIt:C3009][accessDate: 04-11-2010]
Endocrine gland disease NOS[accessedResource: SNOMEDCT:267475005][accessDate: 04-11-2010]
Endocrinopathy[accessedResource: SNOMEDCT:362969004][accessDate: 04-11-2010]
Endocrine gland disease NOS (disorder)[accessedResource: SNOMEDCT:267475005][accessDate: 04-11-2010]
Endocrinopathy
NCIt:C27565
Disorder of endocrine gland
Endocrine disease
SNOMEDCT:190594008
Any deviation from the normal structure or function of the endocrine system that is manifested by a characteristic set of symptoms and signs.
Endocrine disturbance NOS (disorder)
MSH:D004700
Endocrine gland disease NOS
Endocrine disorder
Unspecified endocrine disorder[accessedResource: ICD9:259.9][accessDate: 04-11-2010]
SNOMEDCT:84452004
Diseases of Endocrine System[accessedResource: MSH:D004700][accessDate: 04-11-2010]
ENDOCRINE DISORDERS[accessedResource: NCIt:C3009][accessDate: 04-11-2010]
Endocrine gland disease NOS (disorder)
Pathological processes of the ENDOCRINE GLANDS, and diseases resulting from abnormal level of available HORMONES.[accessedResource: MSH:D004700][accessDate: 04-11-2010]
ENDOCRINE DIS
Hormone disturbance NOS
SNOMEDCT:267475005
Pathological processes of the ENDOCRINE GLANDS, and diseases resulting from abnormal level of available HORMONES.
Endocrine disturbance NOS[accessedResource: SNOMEDCT:267489000][accessDate: 04-11-2010]
DOID:28
GeneRIF:15296474
Endocrine disturbance NOS
Hormone disturbance[accessedResource: SNOMEDCT:362969004][accessDate: 04-11-2010]
Hormone abnormality
Ele Holloway
James Malone
MEC1
Ele Holloway
James Malone
C4II
Ele Holloway
Tomasz Adamusiak
iatrogenic Kaposi's sarcoma
DOID:6188
serous cystadenoma NOS (morphologic abnormality)
serous Cystoma[accessedResource: DOID:2631][accessDate: 04-11-2010]
serous cystadenoma
serous Cystoma
serous cystadenoma NOS (morphologic abnormality)[accessedResource: DOID:2631][accessDate: 04-11-2010]
serous microcystic adenoma[accessedResource: DOID:2631][accessDate: 04-11-2010]
serous microcystic adenoma
James Malone
Ele Holloway
DOID:2631
Tomasz Adamusiak
STRUCTURE_ChemicalName_IUPAC:(3aR,7aS)-3a,7a-dimethylhexahydro-4,7-epoxy-2-benzofuran-1,3-dione
DSSTox_Generic_SID:41752
STRUCTURE_Formula:C10H12O4
CASRN:56-25-7
Ele Holloway
cantharidin
DSSTox_CID:21752
James Malone
C34H32ClFeN4O4
protohemin
chlorido(protoporphyrinato)iron(III)
InChIKey=BTIJJDXEELBZFS-MXZCRJNTDE
chloro[3,7,12,17-tetramethyl-8,13-divinylporphyrin-2,18-dipropanoato(2-)]iron(III)
James Malone
Ele Holloway
InChI=1/C34H34N4O4.ClH.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);1H;/q;;+3/p-3/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;;/fC34H32N4O4.Cl.Fe/h39,41H;1h;/q-2;-1;m
hemin
http://www.ebi.ac.uk/efo/EFO_0002409
hemine
Haemin
A heme b that has formula C34H32ClFeN4O4.
CC1=C(CCC(O)=O)C2=[N]3C1=Cc1c(C)c(C=C)c4C=C5C(C)=C(C=C)C6=[N]5[Fe]3(Cl)(n14)n1c(=C6)c(C)c(CCC(O)=O)c1=C2
CHEBI:50385
chloro(protoporphyrinato)iron(III)
inhibidores enzimaticos
A compound or agent that combines with an enzyme in such a manner as to prevent the normal substrate-enzyme combination and the catalytic reaction.
James Malone
enzyme inhibitor
enzyme inhibitors
inhibiteurs enzymatiques
CHEBI:23924
http://www.ebi.ac.uk/efo/EFO_0001822
inhibidor enzimatico
inhibiteur enzymatique
Cranial Nerve X
Tenth Cranial Nerve[accessedResource: NCIt:C12812][accessDate: 04-11-2010]
Tenth Cranial Nerve
Tomasz Adamusiak
Pneumogastric Nerve
Jie Zheng
Cranial Nerve X[accessedResource: NCIt:C12812][accessDate: 04-11-2010]
Pneumogastric Nerve[accessedResource: NCIt:C12812][accessDate: 04-11-2010]
NCIt:C12812
vagus nerve
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#technical_replicate[accessedResource: MO_641][accessDate: 04-11-2010]
James Malone
A technical replicate is a replicate role where the same BioSample is use e.g. the same pool of RNA used to assess technical (as opposed to biological) variation within an experiment.
technical replicate
MO_641
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#technical_replicate
Ele Holloway
James Malone
NCI-H23
4-[(4-methylpiperazin-1-yl)methyl]-N-{4-methyl-3-[(4-pyridin-3-ylpyrimidin-2-yl)amino]phenyl}benzamide
InChIKey=KTUFNOKKBVMGRW-RPGFEBOUCX
CN1CCN(CC1)Cc1ccc(cc1)C(=O)Nc1ccc(C)c(Nc2nccc(n2)-c2cccnc2)c1
STI 571
alpha-(4-methyl-1-piperazinyl)-3'-((4-(3-pyridyl)-2-pyrimidinyl)amino)-p-toluidide
imatinib
InChI=1/C29H31N7O/c1-21-5-10-25(18-27(21)34-29-31-13-11-26(33-29)24-4-3-12-30-19-24)32-28(37)23-8-6-22(7-9-23)20-36-16-14-35(2)15-17-36/h3-13,18-19H,14-17,20H2,1-2H3,(H,32,37)(H,31,33,34)/f/h32,34H
CHEBI:45783
4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE
A N-methylpiperazine that has formula C29H31N7O.
James Malone
C29H31N7O
http://www.ebi.ac.uk/efo/EFO_0001555
James Malone
CS57843 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158867&type=germplasm
CS57843
http://www.arabidopsis.org/servlets/TairObject?id=1005158867&type=germplasm
amygdala
EV:0100189
An almond-shaped group of basal nuclei anterior to the inferior horn of the lateral ventricle of the brain, within the temporal lobe. The amygdala is part of the limbic system. (MeSH)[accessedResource: NCIt:C12440][accessDate: 04-11-2010]
SAEL:4
Amygdaloid Nucleus
amygdaloid complex
Subdivision of basal ganglion of telencephalon which is an almond-shaped gray mass in the dorsomedial part of the temporal lobe.
An almond-shaped group of basal nuclei anterior to the inferior horn of the lateral ventricle of the brain, within the temporal lobe. The amygdala is part of the limbic system. (MeSH)
MAT:0000289
archistriatum[accessedResource: NIFSTD:birnlex_1241][accessDate: 04-11-2010]
Amygdaloid Body[accessedResource: NCIt:C12440][accessDate: 04-11-2010]
archistriatum
corpus amygdaloideum[accessedResource: BTO:0001042][accessDate: 04-11-2010]
Amygdaloid Nucleus[accessedResource: NCIt:C12440][accessDate: 04-11-2010]
BTO:0001042
Amygdaloid nuclear complex
Subcortical brain region lying anterior to the hippocampal formation in the temporal lobe and anterior to the temporal horn of the lateral ventricle in some species. It is usually subdivided into several groups. Functionally, it is not considered a unitary structure (MM).
Amygdaloid complex[accessedResource: NIFSTD:birnlex_1241][accessDate: 04-11-2010]
Tomasz Adamusiak
NCIt:C12440
The one of the four basal ganglia in each cerebral hemisphere that is part of the limbic system and consists of an almond-shaped mass of gray matter in the anterior extremity of the temporal lobe.
MA:0000887
amygdala central nucleus
corpus amygdaloideum
NIFSTD:birnlex_1241
Amygdaloid Body
nucleus amygdalae
Amygdaloid nuclear groups[accessedResource: FMAID:61841][accessDate: 04-11-2010]
Amygdaloid nuclear groups
Amygdaloid nuclear complex[accessedResource: FMAID:61841][accessDate: 04-11-2010]
James Malone
Subcortical brain region lying anterior to the hippocampal formation in the temporal lobe and anterior to the temporal horn of the lateral ventricle in some species. It is usually subdivided into several groups. Functionally, it is not considered a unitary structure (MM).[accessedResource: NIFSTD:birnlex_1241][accessDate: 04-11-2010]
FMAID:61841
The one of the four basal ganglia in each cerebral hemisphere that is part of the limbic system and consists of an almond-shaped mass of gray matter in the anterior extremity of the temporal lobe.[accessedResource: BTO:0001042][accessDate: 04-11-2010]
nucleus amygdalae[accessedResource: BTO:0001042][accessDate: 04-11-2010]
Ele Holloway
James Malone
ST486
Tomasz Adamusiak
epibranchial placode
ZFA:0001294
periaqueductal gray
Ele Holloway
James Malone
Tomasz Adamusiak
heregulin B1
CASRN:155646-83-6
DSSTox_Generic_SID:40493
HRG
antinematodal agent
A substance used in the treatment or control of nematode infestations.
http://www.ebi.ac.uk/efo/EFO_0001835
James Malone
CHEBI:35444
antinematodals
antinematodal drug
antinematodal drugs
Ele Holloway
James Malone
Natural Language Generator 8th April 2010
A Kc is a cell line.
A Kc derives from a drosophila melanogaster.
Kc
GeneRIF:15902504
GeneRIF:15973775
Fibrillary Astrocytomas
Childhood Cerebral Astrocytoma[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytomas, Juvenile Pilocytic
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation. (From Devita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2013-7; Holland et al., Cancer Medicine, 3d ed, p1082)[accessedResource: MSH:D001254][accessDate: 04-11-2010]
[M]Astrocytoma NOS
Intracranial Astrocytomas[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytoma, Grade II[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytomas, Grade I[accessedResource: MSH:D001254][accessDate: 04-11-2010]
GeneRIF:12435805
Astrocytoma of brain (disorder)[accessedResource: SNOMEDCT:254938000][accessDate: 04-11-2010]
Grade III Astrocytoma[accessedResource: MSH:D001254][accessDate: 04-11-2010]
A glial tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, subependymal giant cell astrocytoma, and glioblastoma.
GeneRIF:12185598
Astrocytoma, no ICD-O subtype
Astrocytomas, Gemistocytic[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Mixed Oligoastrocytoma[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytoma, NOS[accessedResource: SNOMEDCT:38713004][accessDate: 04-11-2010]
Grade I Astrocytomas
SNOMEDCT:254938000
GeneRIF:12819022
Mixed Oligoastrocytomas[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytomas, Anaplastic
GeneRIF:15289301
Gliomas, Astrocytic[accessedResource: MSH:D001254][accessDate: 04-11-2010]
GeneRIF:11783119
astrocytoma, no ICD-O subtype (morphologic abnormality)
MSH:D001254
GeneRIF:11922706
[M]Astrocytoma NOS[accessedResource: SNOMEDCT:38713004][accessDate: 04-11-2010]
Pilocytic Astrocytomas[accessedResource: MSH:D001254][accessDate: 04-11-2010]
astroglioma
Fibrillary Astrocytoma[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytoma, Protoplasmic[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Grade II Astrocytoma
NIFSTD:birnlex_12619
Astrocytic tumour of brain[accessedResource: SNOMEDCT:254938000][accessDate: 04-11-2010]
GeneRIF:15494521
Astrocytic Tumor
GeneRIF:12740910
SNOMEDCT:38713004
Intracranial Astrocytoma[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytic Gliomas
Protoplasmic Astrocytoma
A glial tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, subependymal giant cell astrocytoma, and glioblastoma.[accessedResource: NCIt:C6958][accessDate: 04-11-2010]
GeneRIF:16103883
Astrocytomas, Fibrillary[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytomas, Protoplasmic[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytoma, Grade I[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Glioma, Astrocytic
GeneRIF:15652402
DOID:3069
Diffuse astrocytoma, low grade
Astrocytic Tumor[accessedResource: NCIt:C6958][accessDate: 04-11-2010]
Astrocytomas, Intracranial
Astrocytoma, Anaplastic[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Diffuse astrocytoma, low grade[accessedResource: SNOMEDCT:38713004][accessDate: 04-11-2010]
Pilocytic Astrocytoma[accessedResource: MSH:D001254][accessDate: 04-11-2010]
GeneRIF:12850541
Fibrillary Astrocytoma
Astrocytomas, Grade III[accessedResource: MSH:D001254][accessDate: 04-11-2010]
astrocytoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:3069][accessDate: 04-11-2010]
GeneRIF:12237771
Cystic astrocytoma
GeneRIF:12203396
GeneRIF:11958417
Astrocytomas, Grade II
Astrocytomas, Juvenile Pilocytic[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytoma, Grade III
GeneRIF:12168116
Oligoastrocytoma, Mixed
GeneRIF:12133571
GeneRIF:14654927
GeneRIF:14603438
Astrocytic tumor of brain
Astrocytoma, low grade[accessedResource: SNOMEDCT:38713004][accessDate: 04-11-2010]
Astrocytoma, Juvenile Pilocytic
GeneRIF:12077339
Astrocytomas, Cerebral
Astrocytomas
Astrocytoma, Gemistocytic[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Diffuse astrocytoma
Astrocytoma, Gemistocytic
Astrocytoma, no ICD-O subtype[accessedResource: SNOMEDCT:38713004][accessDate: 04-11-2010]
GeneRIF:12393263
Cerebral Astrocytoma, Childhood
Astrocytic glioma[accessedResource: SNOMEDCT:38713004][accessDate: 04-11-2010]
Childhood Cerebral Astrocytomas
Astrocytomas[accessedResource: MSH:D001254][accessDate: 04-11-2010]
GeneRIF:15643521
Astrocytoma, low grade
Cystic astrocytoma[accessedResource: SNOMEDCT:38713004][accessDate: 04-11-2010]
Astrocytic tumor of brain[accessedResource: SNOMEDCT:254938000][accessDate: 04-11-2010]
GeneRIF:12829373
Pilocytic Astrocytoma, Juvenile[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytic tumour of brain
GeneRIF:12519873
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation (MeSH).[accessedResource: NIFSTD:birnlex_12619][accessDate: 04-11-2010]
Oligoastrocytomas, Mixed
Astroglioma[accessedResource: NIFSTD:birnlex_12619][accessDate: 04-11-2010]
Astrogliomas[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Subependymal Giant Cell Astrocytoma[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytic Neoplasm[accessedResource: NCIt:C6958][accessDate: 04-11-2010]
Cerebral Astrocytomas, Childhood[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytomas, Anaplastic[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytomas, Cerebral[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Anaplastic Astrocytoma
Astrocytoma of brain (disorder)
GeneRIF:12111824
NCIt:C6958
Subependymal Giant Cell Astrocytoma
GeneRIF:14729615
GeneRIF:12023424
Grade I Astrocytoma
astrocytoma
Intracranial Astrocytoma
GeneRIF:12385586
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation. (From Devita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2013-7; Holland et al., Cancer Medicine, 3d ed, p1082)
Astrocytomas, Gemistocytic
GeneRIF:11836615
GeneRIF:15799819
Astrocytoma of brain[accessedResource: SNOMEDCT:254938000][accessDate: 04-11-2010]
Astrogliomas
Astrocytoma, NOS
Pilocytic Astrocytomas
Astrocytoma, Cerebral[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Astrocytic Neoplasm
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation (MeSH).
GeneRIF:15178645
Cerebral Astrocytoma
James Malone
Protoplasmic Astrocytomas
Diffuse astrocytoma[accessedResource: SNOMEDCT:38713004][accessDate: 04-11-2010]
Astrocytomas, Grade III
Astrocytoma of brain
GeneRIF:12747804
GeneRIF:12916719
Astrocytoma, Pilocytic
Astrocytomas, Grade II[accessedResource: MSH:D001254][accessDate: 04-11-2010]
Tomasz Adamusiak
Ele Holloway
James Malone
AGS
James Malone
left arm
Left is a geometric modifier describing something which is to the left of the median of an organism or organism part, for example left arm.
left
MAT:0000489
James Malone
Tomasz Adamusiak
129S1/SvImJ
NIFSTD:birnlex_106
http://jaxmice.jax.org/strain/002248.html
Tomasz Adamusiak
posterior lateral line system
ZFA:0001471
James Malone
B6C3F1 is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/100010.html
B6C3F1
JAX:100010
James Malone
CAMA1
lateral root
PO:0020121
acute endocarditis (disorder)[accessedResource: DOID:10314][accessDate: 04-11-2010]
SNOMEDCT:56819008
acute endocarditis NOS (disorder)
Inflammation of the inner lining of the heart (ENDOCARDIUM), the continuous membrane lining the four chambers and HEART VALVES. It is often caused by microorganisms including bacteria, viruses, fungi, and rickettsiae. Left untreated, endocarditis can damage heart valves and become life-threatening.
NCIt:C34582
acute endocarditis, unspecified
acute Endocarditis
Endocarditis (disorder)[accessedResource: DOID:10314][accessDate: 04-11-2010]
Endocarditides[accessedResource: MSH:D004696][accessDate: 04-11-2010]
Inflammation of the endocardium.[accessedResource: NCIt:C34582][accessDate: 04-11-2010]
DOID:10314
Endocarditis NOS
James Malone
Endocarditides, Infective
Inflammation of the endocardium.
endocarditis
acute endocarditis NOS (disorder)[accessedResource: DOID:10314][accessDate: 04-11-2010]
acute endocarditis, unspecified[accessedResource: DOID:10314][accessDate: 04-11-2010]
A heart disease involving non-infectious inflammation of the endocardium (inner layer of the heart).
Endocarditides, Infective[accessedResource: MSH:D004696][accessDate: 04-11-2010]
Endocarditis (disorder)
Endocarditis, Infective[accessedResource: MSH:D004696][accessDate: 04-11-2010]
Endocarditis, NOS[accessedResource: SNOMEDCT:56819008][accessDate: 04-11-2010]
Endocarditides
acute endocarditis (disorder)
Endocarditis, Infective
A heart disease involving non-infectious inflammation of the endocardium (inner layer of the heart).[accessedResource: DOID:10314][accessDate: 04-11-2010]
acute Endocarditis[accessedResource: DOID:10314][accessDate: 04-11-2010]
MSH:D004696
Inflammation of the inner lining of the heart (ENDOCARDIUM), the continuous membrane lining the four chambers and HEART VALVES. It is often caused by microorganisms including bacteria, viruses, fungi, and rickettsiae. Left untreated, endocarditis can damage heart valves and become life-threatening.[accessedResource: MSH:D004696][accessDate: 04-11-2010]
non-infective endocarditis
sunitinib
21134
41134
557795-19-4
C22H27FN4O2
N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-3H-pyrrole-3-carboxamide
Tomasz Adamusiak
axial mesoderm
ZFA:0001204
James Malone
Congenital bilateral absence of the vas deferens (CAVD) is a condition in which the two vas deferens, male reproductive organs, fail to form properly prior to birth.
congenital bilateral absence of the vas deferens
Wikipedia: http://en.wikipedia.org/wiki/Congenital_absence_of_the_vas_deferens
Tomasz Adamusiak
James Malone
DSSTox_CID:18
2-acetylaminofluorene
2-AAF
Ele Holloway
DSSTox_Generic_SID:39227
CASRN:53-96-3
true
obsolete_percent oxygen
peripheral nervous system - human
peripheral neuron
ZFA:0000070
PNS - somatic[accessedResource: MAT:0000099][accessDate: 04-11-2010]
SAEL:81
Peripheral nervous system[accessedResource: FMAID:9903][accessDate: 04-11-2010]
sensory axons peripheral[accessedResource: ZFA:0000070][accessDate: 04-11-2010]
CL:0000111
WBbt:0005760
Peripheral nervous system
sensory axons peripheral
PNS - somatic
A neuron that is part of nerve found outside the central nervous system.[accessedResource: CL:0000111][accessDate: 04-11-2010]
Tomasz Adamusiak
James Malone
FMAID:9903
A neuron that is part of nerve found outside the central nervous system.
MAT:0000099
peripheral neuron[accessedResource: CL:0000111][accessDate: 04-11-2010]
peripheral nerve[accessedResource: MAT:0000099][accessDate: 04-11-2010]
somatic nervous system
peripheral nervous system - human[accessedResource: MAT:0000099][accessDate: 04-11-2010]
MA:0000230
peripheral nerve
James Malone
CS57716 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158740&type=germplasm
CS57716
http://www.arabidopsis.org/servlets/TairObject?id=1005158740&type=germplasm
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001629
Poisonous substance produced by a biological organism such as a microbe, animal or plant.
toxin
NIFSTD:birnlex_2103
toxins
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#urine[accessedResource: MO_399][accessDate: 04-11-2010]
Tomasz Adamusiak
Waste material that is secreted by the kidney in vertebrates, is rich in end products of protein metabolism together with salts and pigments, and forms a clear amber and usually slightly acid fluid in mammals but is semisolid in birds and reptiles.
Waste material that is secreted by the kidney in vertebrates, is rich in end products of protein metabolism together with salts and pigments, and forms a clear amber and usually slightly acid fluid in mammals but is semisolid in birds and reptiles.[accessedResource: BTO:0001419][accessDate: 04-11-2010]
urine
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#urine
MO_399
Jie Zheng
BTO:0001419
James Malone
http://www.ebi.ac.uk/efo/EFO_0002030
A normalization data transformation is a data transformation that has objective normalization.
normalization data transformation
alive
pre-mortem
nocodazol
A thiophene that has formula C14H11N3O3S.
InChIKey=KYRVNWMVYQXFEU-KJQBJTEXCI
nocodazolum
http://www.ebi.ac.uk/efo/EFO_0001580
InChI=1/C14H11N3O3S/c1-20-14(19)17-13-15-9-5-4-8(7-10(9)16-13)12(18)11-3-2-6-21-11/h2-7H,1H3,(H2,15,16,17,19)/f/h15,17H
N-(5-(2-thenoyl)-2-benzimidazolyl)carbamic acid methyl ester
methyl [5-(2-thienylcarbonyl)-1H-benzimidazol-2-yl]carbamate
(5-(2-thienylcarbonyl)-1H-benzimidazol-2-yl)-carbamic acid methyl ester
COC(=O)Nc1nc2cc(ccc2[nH]1)C(=O)c1cccs1
CHEBI:34892
methyl (5-(2-thienylcarbonyl))-1H-benzimidazole-2-ylcarbamate
C14H11N3O3S
nocodazole
Principal body part subdivision[accessedResource: FMAID:67504][accessDate: 04-11-2010]
anatomical site
Anatomical structure which is a primary subdivision of whole organism. The mereological sum of these is the whole organism.
Subdivision of cardinal body part[accessedResource: FMAID:67504][accessDate: 04-11-2010]
organism subdivision
Principal body part subdivision
body part[accessedResource: MAT:0000293][accessDate: 04-11-2010]
body part
TAO:0001308
Subdivision of cardinal body part
organism subdivision[accessedResource: MAT:0000293][accessDate: 04-11-2010]
EV:0100008
animal body part
FMAID:67504
Anatomical structure which is a primary subdivision of whole organism. The mereological sum of these is the whole organism.[accessedResource: TAO:0001308][accessDate: 04-11-2010]
XAO:0003013
Anatomical structure, which is a subdivision of a cardinal body part; it may exclude bones; is demarcated from other subdivisions of the same cardinal body part by anatomical surfaces or lines or topographical references; together with other contiguous subdivisions of the same cardinal body part, it constitutes a cardinal body part. Examples: thorax, perineum, back of neck, forearm, hand, phalanx, nose, auricle of ear, scrotum.
James Malone
anatomical site[accessedResource: MAT:0000293][accessDate: 04-11-2010]
MAT:0000293
polymorphonuclear neutrophil[accessedResource: CL:0000775][accessDate: 04-11-2010]
polymorphonuclear leucocyte[accessedResource: CL:0000043][accessDate: 04-11-2010]
A fully differentiated basophil, a granular leukocyte with an irregularly shaped, pale-staining nucleus that is partially constricted into two lobes, and with cytoplasm that contains coarse granules of variable size. Basophils contain vasoactive amines such as histamine and serotonin, which are released on appropriate stimulation.[accessedResource: CL:0000043][accessDate: 04-11-2010]
CL:0000775
neutrophil leucocyte[accessedResource: CL:0000775][accessDate: 04-11-2010]
CL:0000043
polynuclear neutrophilic leucocyte[accessedResource: CL:0000775][accessDate: 04-11-2010]
PMN
neutrophil
polymorphonuclear leukocyte
neutrocyte[accessedResource: CL:0000775][accessDate: 04-11-2010]
neutrophil leukocyte[accessedResource: CL:0000775][accessDate: 04-11-2010]
mature basophil[accessedResource: CL:0000043][accessDate: 04-11-2010]
polynuclear neutrophilic leukocyte
neutrophil leucocyte
Any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes.
mature basophil leucocyte
neutrophilic leucocyte[accessedResource: CL:0000775][accessDate: 04-11-2010]
polynuclear neutrophilic leukocyte[accessedResource: CL:0000775][accessDate: 04-11-2010]
mature basophil leucocyte[accessedResource: CL:0000043][accessDate: 04-11-2010]
poly[accessedResource: CL:0000775][accessDate: 04-11-2010]
poly
mature basophil leukocyte
PMN[accessedResource: CL:0000775][accessDate: 04-11-2010]
neutrocyte
neutrophil leukocyte
mature basophil leukocyte[accessedResource: CL:0000043][accessDate: 04-11-2010]
neutrophilic leukocyte
A fully differentiated basophil, a granular leukocyte with an irregularly shaped, pale-staining nucleus that is partially constricted into two lobes, and with cytoplasm that contains coarse, bluish-black granules of variable size. Basophils contain vasoactive amines such as histamine and serotonin, which are released on appropriate stimulation.
neutrophilic leucocyte
Tomasz Adamusiak
neutrophilic leukocyte[accessedResource: CL:0000775][accessDate: 04-11-2010]
Ele Holloway
James Malone
polymorphonuclear neutrophil
A fully differentiated basophil, a granular leukocyte with an irregularly shaped, pale-staining nucleus that is partially constricted into two lobes, and with cytoplasm that contains coarse granules of variable size. Basophils contain vasoactive amines such as histamine and serotonin, which are released on appropriate stimulation.
polymorphonuclear leukocyte[accessedResource: CL:0000043][accessDate: 04-11-2010]
polymorphonuclear leucocyte
mature basophil
Any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes.[accessedResource: CL:0000775][accessDate: 04-11-2010]
polynuclear neutrophilic leucocyte
Duplicate use EFO_0000900
NCIt:C12462
Ganglion with sensory function within the vertebral column.[accessedResource: NCIt:C12462][accessDate: 10-05-2010]
Dorsal Root Ganglion
true
Ganglion with sensory function within the vertebral column.
obsolete_dorsal root ganglion
Sensory ganglia located on the dorsal spinal roots within the vertebral column. (MeSH)
anterior midgut inclusive primordium[accessedResource: FBbt:00000444][accessDate: 04-11-2010]
P2 antEndoP[accessedResource: FBbt:00000444][accessDate: 04-11-2010]
P2 antEndoP
anterior midgut inclusive primordium
antMGP2
antMGP2[accessedResource: FBbt:00000444][accessDate: 04-11-2010]
James Malone
anterior midgut primordium
FBbt:00000444
alpha-D-glucopyranose
CHEBI:17925
A D-glucopyranose that has formula C6H12O6.
OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O
InChI=1/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6+/m1/s1
alpha-D-glucose
http://www.ebi.ac.uk/efo/EFO_0001482
C6H12O6
alpha-dextrose
InChIKey=WQZGKKKJIJFFOK-DVKNGEFBBQ
Tonsils[accessedResource: NCIt:C12802][accessDate: 04-11-2010]
Either of a pair of prominent masses of lymphoid tissue that lie one on each side of the throat between the anterior and posterior pillars of the fauces.
Tonsils
James Malone
Adenoids
Either of a pair of prominent masses of lymphoid tissue that lie one on each side of the throat between the anterior and posterior pillars of the fauces.[accessedResource: BTO:0001387][accessDate: 04-11-2010]
NCIt:C12802
tonsil
BTO:0001387
The two organs situated in the throat on either side of the narrow passage from the mouth to the pharynx. They are composed of lymphoid tissues.[accessedResource: NCIt:C12802][accessDate: 04-11-2010]
The two organs situated in the throat on either side of the narrow passage from the mouth to the pharynx. They are composed of lymphoid tissues.
abscess
abscess NOS[accessedResource: DOID:1161][accessDate: 04-11-2010]
abscess NOS (disorder)[accessedResource: DOID:1161][accessDate: 04-11-2010]
abscess (disorder)
abscess NOS (disorder)
abscess (disorder)[accessedResource: DOID:1161][accessDate: 04-11-2010]
abscess morphology[accessedResource: DOID:1161][accessDate: 04-11-2010]
abscess NOS
DOID:1161
Tomasz Adamusiak
abscess morphology
James Malone
HCC44
Common carotid artery
Common carotid artery[accessedResource: FMAID:3939][accessDate: 04-11-2010]
carotid artery
Artery originating at the junction of the first two aortic arches and supplying the anterior brain. Kimmel et al, 1995.[accessedResource: TAO:0000097][accessDate: 04-11-2010]
A key artery located in the front of the neck that carries blood from the heart to the brain. Cholesterol plaques on the inner wall of the carotid artery can lead to stroke.
EMAPA:18609
Trunk of common carotid tree
TAO:0000097
BTO:0000168
Artery originating at the junction of the first two aortic arches and supplying the anterior brain.[accessedResource: ZFA:0000097][accessDate: 04-11-2010]
ZFA:0000097
internal carotid artery
XAO:0000345
internal carotid artery[accessedResource: TAO:0000097][accessDate: 04-11-2010]
MA:0001925
Trunk of common carotid tree[accessedResource: FMAID:3939][accessDate: 04-11-2010]
FMAID:3939
A key artery located in the front of the neck that carries blood from the heart to the brain. Cholesterol plaques on the inner wall of the carotid artery can lead to stroke.[accessedResource: BTO:0000168][accessDate: 04-11-2010]
James Malone
EV:0100379
Artery originating at the junction of the first two aortic arches and supplying the anterior brain.
EHDAA:6373
Artery originating at the junction of the first two aortic arches and supplying the anterior brain. Kimmel et al, 1995.
17alpha-ethinylestradiol
(17beta)-17-ethynylestra-1(10),2,4-triene-3,17-diol
20576
57-63-6
576
C20H24O2
EE2; ethinylestradiol
Tomasz Adamusiak
embryonic maxillary sensory complex
FBbt:00005618
Jie Zheng
Tomasz Adamusiak
pancreatic mesenchyme
James Malone
CS57598 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158622&type=germplasm
CS57598
http://www.arabidopsis.org/servlets/TairObject?id=1005158622&type=germplasm
Irregular microscopic structures scattered throughout the pancreas and comprising its endocrine part (the endocrine pancreas). In humans, they are composed of at least four types of cells: the alpha cells, which secrete glucagon; the beta cells, which are the most abundant and secrete insulin; the delta cells, which secrete somatostatin; and the PP cells, which secrete pancreatic polypeptide. Degeneration of the beta cells, whose secretion (insulin) is important in carbohydrate metabolism, is the major cause of type I diabetes mellitus.
island of pancreas
island of Langerhans[accessedResource: BTO:0000991][accessDate: 04-11-2010]
pancreatic islet[accessedResource: BTO:0000991][accessDate: 04-11-2010]
Irregular microscopic structures scattered throughout the pancreas and comprising its endocrine part (the endocrine pancreas). In humans, they are composed of at least four types of cells: the alpha cells, which secrete glucagon; the beta cells, which are the most abundant and secrete insulin; the delta cells, which secrete somatostatin; and the PP cells, which secrete pancreatic polypeptide. Degeneration of the beta cells, whose secretion (insulin) is important in carbohydrate metabolism, is the major cause of type I diabetes mellitus.[accessedResource: BTO:0000991][accessDate: 04-11-2010]
island of pancreas[accessedResource: BTO:0000991][accessDate: 04-11-2010]
BTO:0000991
James Malone
islet of Langerhans
island of Langerhans
pancreatic islet
aortic smooth muscle cell[accessedResource: BTO:0001685][accessDate: 04-11-2010]
aortic smooth muscle[accessedResource: BTO:0001685][accessDate: 04-11-2010]
aorta smooth muscle
BTO:0001685
aortic smooth muscle
aortic smooth muscle cell
Ele Holloway
James Malone
KG1
Tomasz Adamusiak
prootic
ZFA:0000575
James Malone
TERV-AntiSenseB56
Ele Holloway
James Malone
SH4
Ele Holloway
James Malone
STA-ET-2.1
STA ET2.1
1,1-Dimethyl-2-oxohydrazine
C2H6N2O
N-methyl-N-nitrosomethanamine
InChI=1/C2H6N2O/c1-4(2)3-5/h1-2H3
DMN
InChIKey=UMFJAHHVKNCGLG-UHFFFAOYAI
N,N-Dimethylnitrosamine
CN(C)N=O
Dimethylnitrosamine
http://www.ebi.ac.uk/efo/EFO_0001579
A nitrosamine that has formula C2H6N2O.
CHEBI:35807
N-nitrosodimethylamine
Dimethylnitrosoamine
family study
Research conducted on members of families, examining the affects of genetics, the environment, or twin offspring.
Tomasz Adamusiak
James Malone
Family Study[accessedResource: NCIt:C15407][accessDate: 04-11-2010]
family based study
Research conducted on members of families, examining the affects of genetics, the environment, or twin offspring.[accessedResource: NCIt:C15407][accessDate: 04-11-2010]
NCIt:C15407
James Malone
R8
James Malone
CS57743 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158767&type=germplasm
CS57743
http://www.arabidopsis.org/servlets/TairObject?id=1005158767&type=germplasm
A developmental stage of the Plasmodium life cycle found within the erythrocyte, called such because of the shape observed.[accessedResource: IDOMAL:0000321][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
A developmental stage of the Plasmodium life cycle found within the erythrocyte, called such because of the shape observed.
ring stage trophozoite
IDOMAL:0000321
Loss of imprinting occurs in some tumour cells
true
Epigenetic status describes the imprinting state of a sample. E.g. Loss of imprinting occurs in some tumour cells
epigenetic status
James Malone
http://www.ebi.ac.uk/efo/EFO_0001804
true
A derived concentration unit which is a standard measure of the number of moles of a given substance per liter of solution.
A unit of molarity is a derived concentration unit which is a standard measure of the number of moles of a given substance per liter of solution.
unit of molarity
UO:0000061
A biological sex quality inhering in an individual or a population that only produces gametes that can be fertilised by male gametes.
MO_506
Tomasz Adamusiak
A biological sex quality inhering in an individual or a population that only produces gametes that can be fertilised by male gametes.[accessedResource: PATO:0000383][accessDate: 04-11-2010]
James Malone
female
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#female
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#female[accessedResource: MO_506][accessDate: 04-11-2010]
PATO:0000383
CARO:0000028
SNOMEDCT:302851001
Synovial sarcoma (morphologic abnormality)
Sarcomas, Synovial[accessedResource: MSH:D013584][accessDate: 04-11-2010]
[M]Synovial sarcoma NOS[accessedResource: SNOMEDCT:63211008][accessDate: 04-11-2010]
NCIt:C3400
Malignant synovioma[accessedResource: SNOMEDCT:302851001][accessDate: 04-11-2010]
James Malone
A malignant neoplasm characterized by the chromosomal translocation t(X;18)(p11;q11). It can occur at any age, but mainly affects young adults, more commonly males. Although any site can be affected, the vast majority of the cases arise in the deep soft tissues of extremities, especially around the knee. Microscopically, synovial sarcoma is classified as monophasic (with a spindle or epithelial cell component) or biphasic (with both spindle and epithelial cell components). Synovial sarcomas can recur or metastasize to the lungs, bones, and lymph nodes.[accessedResource: NCIt:C3400][accessDate: 04-11-2010]
[M]Synovioma NOS
Synovial sarcoma, NOS
A malignant neoplasm arising from tenosynovial tissue of the joints and in synovial cells of tendons and bursae. The legs are the most common site, but the tumor can occur in the abdominal wall and other trunk muscles. There are two recognized types: the monophasic (characterized by sheaths of monotonous spindle cells) and the biphasic (characterized by slit-like spaces or clefts within the tumor, lined by cuboidal or tall columnar epithelial cells). These sarcomas occur most commonly in the second and fourth decades of life. (From Dorland, 27th ed; DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p1363)[accessedResource: MSH:D013584][accessDate: 04-11-2010]
Synovioma
GeneRIF:14507652
Malignant synovioma
GeneRIF:11895494
GeneRIF:12037676
Synovial sarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:63211008][accessDate: 04-11-2010]
Synovioma[accessedResource: SNOMEDCT:63211008][accessDate: 04-11-2010]
Synoviomas[accessedResource: MSH:D013584][accessDate: 04-11-2010]
Synovioma, NOS[accessedResource: SNOMEDCT:63211008][accessDate: 04-11-2010]
[M]Synovial sarcoma NOS
GeneRIF:11733362
Synovial sarcoma, NOS[accessedResource: SNOMEDCT:63211008][accessDate: 04-11-2010]
Synovioma, NOS
GeneRIF:15069540
GeneRIF:15735574
DOID:5485
A malignant neoplasm characterized by the chromosomal translocation t(X;18)(p11;q11). It can occur at any age, but mainly affects young adults, more commonly males. Although any site can be affected, the vast majority of the cases arise in the deep soft tissues of extremities, especially around the knee. Microscopically, synovial sarcoma is classified as monophasic (with a spindle or epithelial cell component) or biphasic (with both spindle and epithelial cell components). Synovial sarcomas can recur or metastasize to the lungs, bones, and lymph nodes.
A malignant neoplasm arising from tenosynovial tissue of the joints and in synovial cells of tendons and bursae. The legs are the most common site, but the tumor can occur in the abdominal wall and other trunk muscles. There are two recognized types: the monophasic (characterized by sheaths of monotonous spindle cells) and the biphasic (characterized by slit-like spaces or clefts within the tumor, lined by cuboidal or tall columnar epithelial cells). These sarcomas occur most commonly in the second and fourth decades of life. (From Dorland, 27th ed; DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p1363)
synovial sarcoma
GeneRIF:12696068
GeneRIF:16158422
Synovial Sarcomas
GeneRIF:16029077
Synoviomas
SS[accessedResource: NCIt:C3400][accessDate: 04-11-2010]
GeneRIF:15467754
Synovial sarcoma (disorder)
SNOMEDCT:63211008
Synovial sarcoma (disorder)[accessedResource: SNOMEDCT:302851001][accessDate: 04-11-2010]
MSH:D013584
GeneRIF:14871970
[M]Synovioma NOS[accessedResource: SNOMEDCT:63211008][accessDate: 04-11-2010]
GeneRIF:12874758
SS
Acute Myeloid Leukemia with Maturation[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
Acute Myelogenous Leukemia with Maturation
AML with Maturation
FAB M2
M2 Acute Myelogenous Leukemia with Maturation[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
Acute Myeloid Leukemia (AML-M2)[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
M2 Acute Myeloblastic Leukemia
acute myeloblastic leukemia with maturation
AML with Maturation[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
M2 Acute Myeloid Leukemia with Maturation
An acute myeloid leukemia (AML) characterized by blasts with evidence of maturation to more mature neutrophils. Patients often present with anemia, neutropenia, and thrombocytopenia. AML with the t(8;21) is usually AML with maturation. This type of AML frequently responds to aggressive therapy. (WHO, 2001)
M2 Acute Myelocytic Leukemia with Maturation
M2 Acute Myeloblastic Leukemia with Maturation[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
M2 Acute Myeloid Leukemia
M2 Acute Myeloblastic Leukemia with Maturation
M2 Acute Myelocytic Leukemia with Maturation[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
Acute Myeloid Leukemia with Maturation
M2 Acute Granulocytic Leukemia[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
Acute M2 Myeloid Leukemia[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
Acute Myeloid Leukemia (AML-M2)
M2 Acute Myelogenous Leukemia with Maturation
FAB M2[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
An acute myeloid leukemia (AML) characterized by blasts with evidence of maturation to more mature neutrophils. Patients often present with anemia, neutropenia, and thrombocytopenia. AML with the t(8;21) is usually AML with maturation. This type of AML frequently responds to aggressive therapy. (WHO, 2001)[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
M2 Acute Myeloblastic Leukemia[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
Acute Myelocytic Leukemia with Maturation[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
Tomasz Adamusiak
M2 Acute Myelogenous Leukemia
Acute Myelogenous Leukemia with Maturation[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
M2 Acute Myelogenous Leukemia[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
NCIt:C3250
M2 Acute Granulocytic Leukemia
M2 Acute Myeloid Leukemia with Maturation[accessedResource: NCIt:C3250][accessDate: 04-11-2010]
Acute Myelocytic Leukemia with Maturation
Ele Holloway
James Malone
SEM
James Malone
GM12760
Oc1ccc(cc1)-c2sc3cc(O)ccc3c2C(=O)c4ccc(OCCN5CCCCC5)cc4
InChI=1/C28H27NO4S/c30-21-8-4-20(5-9-21)28-26(24-13-10-22(31)18-25(24)34-28)27(32)19-6-11-23(12-7-19)33-17-16-29-14-2-1-3-15-29/h4-13,18,30-31H,1-3,14-17H2
C28H27NO4S
raloxifeno
CHEBI:8772
raloxifene
http://www.ebi.ac.uk/efo/EFO_0001601
James Malone
raloxifenum
(2-(4-Hydroxyphenyl)-6-hydroxybenzo(b)thien-3-yl)(4-(2-(1-piperidinyl)ethoxy)phenyl)methanone
[6-hydroxy-2-(4-hydroxyphenyl)-1-benzothien-3-yl][4-(2-piperidin-1-ylethoxy)phenyl]methanone
InChIKey=GZUITABIAKMVPG-UHFFFAOYAG
LY 139481
A benzothiophene that has formula C28H27NO4S.
Natural Language Generator 8th April 2010
BT20
A BT20 is a cell line.
A BT20 is all of the following: something that is bearer of a breast carcinoma, something that derives from a homo sapiens, and something that derives from an epithelial cell.
James Malone
lipoteichoic Acid
40534
56411-57-5
A clear cell sarcoma and sarcoma of kidney that can spread from the kidney to other organs.[accessedResource: DOID:4880][accessDate: 04-11-2010]
A clear cell sarcoma that can spread from the kidney to other organs.
SNOMEDCT:24007003
Pediatric Kidney Clear Cell Sarcoma[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
CCSK
Kidney Clear Cell Sarcoma[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
Childhood Kidney Clear Cell Sarcoma[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
Clear cell sarcoma of kidney (morphologic abnormality)
[M] Clear cell sarcoma of kidney
Pediatric Renal Clear Cell Sarcoma
DOID:4880
Pediatric Renal Clear Cell Sarcoma[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
James Malone
SNOMEDCT:189813000
CCSK[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
renal Clear cell sarcoma[accessedResource: DOID:4880][accessDate: 04-11-2010]
NCIt:C4264
renal Clear cell sarcoma
A rare pediatric sarcoma affecting the kidney. It is characterized by the presence of epithelioid or spindle cells forming cords or nests, separated by fibrovascular septa. This type of sarcoma frequently metastasizes to the bones.
Childhood Clear Cell Sarcoma of the Kidney
Pediatric Kidney Clear Cell Sarcoma
Childhood Clear Cell Sarcoma of the Kidney[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
A clear cell sarcoma and sarcoma of kidney that can spread from the kidney to other organs.
Clear cell sarcoma of kidney (morphologic abnormality)[accessedResource: SNOMEDCT:24007003][accessDate: 04-11-2010]
[M] Clear cell sarcoma of kidney (morphologic abnormality)[accessedResource: SNOMEDCT:189813000][accessDate: 04-11-2010]
Childhood Renal Clear Cell Sarcoma
clear cell sarcoma of the kidney
[M] Clear cell sarcoma of kidney[accessedResource: SNOMEDCT:189813000][accessDate: 04-11-2010]
Kidney Clear Cell Sarcoma
A rare pediatric sarcoma affecting the kidney. It is characterized by the presence of epithelioid or spindle cells forming cords or nests, separated by fibrovascular septa. This type of sarcoma frequently metastasizes to the bones.[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
Clear Cell Sarcoma of Kidney
Clear Cell Sarcoma of Kidney[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
clear cell renal cell carcinoma
[M] Clear cell sarcoma of kidney (morphologic abnormality)
Childhood Renal Clear Cell Sarcoma[accessedResource: NCIt:C4264][accessDate: 04-11-2010]
Childhood Kidney Clear Cell Sarcoma
Ele Holloway
James Malone
NCI-H1618
James Malone
CS57719 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158743&type=germplasm
CS57719
http://www.arabidopsis.org/servlets/TairObject?id=1005158743&type=germplasm
Ele Holloway
James Malone
SUDHL6
Ele Holloway
James Malone
Y79
James Malone
Abdomen Skin[accessedResource: NCIt:C52758][accessDate: 04-11-2010]
The skin or integument surrounding the abdomen.
NCIt:C52758
The skin or integument surrounding the abdomen.[accessedResource: NCIt:C52758][accessDate: 04-11-2010]
Abdomen Skin
abdominal skin
serous cystadenofibroma
ovarian serous cystadenofibroma
James Malone
ovarian serous cystadenofibroma[accessedResource: DOID:7320][accessDate: 04-11-2010]
DOID:7320
Ele Holloway
Ele Holloway
James Malone
KATOIII
Tomasz Adamusiak
European-American
http://en.wikipedia.org/wiki/European_American
Tomasz Adamusiak
foregut anlage
FBbt:00005431
Tomasz Adamusiak
hair cell anterior macula
ZFA:0000678
GeneRIF:15608054
Hutchinson-Gilford syndrome[accessedResource: SNOMEDCT:238870004][accessDate: 04-11-2010]
Syndrome, Hutchinson-Gilford
Progeria syndrome (disorder) [Ambiguous][accessedResource: DOID:3911][accessDate: 04-11-2010]
Premature senility syndrome
GeneRIF:15342704
GeneRIF:12702809
HGPS
progeria[accessedResource: DOID:3911][accessDate: 04-11-2010]
MSH:D011371
progeria syndrome
Hutchinson-Gilford syndrome (disorder)[accessedResource: DOID:3911][accessDate: 04-11-2010]
Progeria
Hutchinson-Gilford Progeria syndrome
GeneRIF:12735900
James Malone
An abnormal congenital condition, associated with defects in the LAMIN TYPE A gene, which is characterized by premature aging in children, where all the changes of cell senescence occur. It is manifested by premature greying; hair loss; hearing loss (DEAFNESS); cataracts (CATARACT); ARTHRITIS; OSTEOPOROSIS; DIABETES MELLITUS; atrophy of subcutaneous fat; skeletal hypoplasia; elevated urinary HYALURONIC ACID; and accelerated ATHEROSCLEROSIS. Many affected individuals develop malignant tumors, especially SARCOMA.
Progeria (disorder)
Progeria (disorder)[accessedResource: DOID:3911][accessDate: 04-11-2010]
Hutchinson-Gilford syndrome (disorder)
HGPS[accessedResource: DOID:3911][accessDate: 04-11-2010]
DOID:3911
A very rare genetic disorder caused by mutations in the LMNA gene. It is characterized by premature aging. Signs and symptoms include failure to thrive, limited growth, alopecia, wrinkled skin, small face, development of atherosclerosis, and heart disease. There is no cure for this condition. Individuals do not usually survive beyond their early twenties. Death usually occurs as a result of complications from atherosclerosis.
GeneRIF:12714972
Hutchinson-Gilford disease[accessedResource: DOID:3911][accessDate: 04-11-2010]
An abnormal congenital condition, associated with defects in the LAMIN TYPE A gene, which is characterized by premature aging in children, where all the changes of cell senescence occur. It is manifested by premature greying; hair loss; hearing loss (DEAFNESS); cataracts (CATARACT); ARTHRITIS; OSTEOPOROSIS; DIABETES MELLITUS; atrophy of subcutaneous fat; skeletal hypoplasia; elevated urinary HYALURONIC ACID; and accelerated ATHEROSCLEROSIS. Many affected individuals develop malignant tumors, especially SARCOMA.[accessedResource: MSH:D011371][accessDate: 04-11-2010]
A very rare genetic disorder caused by mutations in the LMNA gene. It is characterized by premature aging. Signs and symptoms include failure to thrive, limited growth, alopecia, wrinkled skin, small face, development of atherosclerosis, and heart disease. There is no cure for this condition. Individuals do not usually survive beyond their early twenties. Death usually occurs as a result of complications from atherosclerosis.[accessedResource: NCIt:C34951][accessDate: 04-11-2010]
NCIt:C34951
SNOMEDCT:238870004
Premature Senility Syndrome[accessedResource: NCIt:C34951][accessDate: 04-11-2010]
GeneRIF:12768443
Hutchinson-Gilford Progeria syndrome[accessedResource: DOID:3911][accessDate: 04-11-2010]
Hutchinson-Gilford Disease
Progeria syndrome (disorder) [Ambiguous]
James Malone
SUM190PT
Tomasz Adamusiak
pharyngeal endoderm
ZFA:0001104
Signet ring cell adenocarcinoma[accessedResource: SNOMEDCT:87737001][accessDate: 04-11-2010]
A usually aggressive, poorly differentiated invasive adenocarcinoma characterized by the presence of malignant glandular cells in which the nucleus is pressed to one side by the presence of intracytoplasmic mucus. It may arise from the stomach, small and large intestine, ampulla of Vater, appendix, gallbladder, pancreas, lung, bladder, breast, and prostate gland.[accessedResource: NCIt:C3774][accessDate: 04-11-2010]
signet ring cell carcinoma
[M]Signet ring carcinoma NOS (morphologic abnormality)
MSH:D018279
A poorly differentiated adenocarcinoma in which the nucleus is pressed to one side by a cytoplasmic droplet of mucus. It usually arises in the gastrointestinal system.[accessedResource: MSH:D018279][accessDate: 04-11-2010]
[M]Signet ring carcinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189702009][accessDate: 04-11-2010]
A poorly differentiated adenocarcinoma in which the nucleus is pressed to one side by a cytoplasmic droplet of mucus. It usually arises in the gastrointestinal system.
DOID:3493
Signet ring carcinoma
Signet ring carcinoma[accessedResource: SNOMEDCT:87737001][accessDate: 04-11-2010]
GeneRIF:11788899
NCIt:C3774
Signet ring cell carcinoma (morphologic abnormality)
Signet ring carcinoma NOS (morphologic abnormality)
SNOMEDCT:87737001
[M]Signet ring carcinoma NOS[accessedResource: SNOMEDCT:189702009][accessDate: 04-11-2010]
SNOMEDCT:189702009
[M]Signet ring carcinoma NOS
Signet ring cell carcinoma (morphologic abnormality)[accessedResource: DOID:3493][accessDate: 04-11-2010]
Signet ring carcinoma NOS (morphologic abnormality)[accessedResource: DOID:3493][accessDate: 04-11-2010]
A usually aggressive, poorly differentiated invasive adenocarcinoma characterized by the presence of malignant glandular cells in which the nucleus is pressed to one side by the presence of intracytoplasmic mucus. It may arise from the stomach, small and large intestine, ampulla of Vater, appendix, gallbladder, pancreas, lung, bladder, breast, and prostate gland.
Signet Ring cell adenocarcinoma
James Malone
ug
A mass unit which is equal to one millionth of a gram or 10^[-6] g.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ug
MO_438
microgram
true
http://www.ebi.ac.uk/efo/EFO_0001707
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ug[accessedResource: MO_438][accessDate: 04-11-2010]
James Malone
Tomasz Adamusiak
A microgram is a mass unit which is equal to 1 gram x 10^-6
µg
Jie Zheng
Tomasz Adamusiak
mandibular muscle
ZFA:0000236
paw[accessedResource: MAT:0000091][accessDate: 04-11-2010]
foot[accessedResource: MAT:0000091][accessDate: 04-11-2010]
Tomasz Adamusiak
autopod
MAT:0000091
SAEL:41
SAEL:45
hand
The generic name for hand, paw, foot etc[accessedResource: MAT:0000091][accessDate: 04-11-2010]
MA:0002714
The generic name for hand, paw, foot etc
hand[accessedResource: MAT:0000091][accessDate: 04-11-2010]
paw
foot
NIFSTD:nlx_anat_20090603
James Malone
EV:0100452
James Malone
Tomasz Adamusiak
probably a role
media
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#media[accessedResource: MO_545][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#media
MO_545
The physical state or matrix used to provide nutrients to the organism (e.g., liquid, agar, soil).
liquid, agar, soil
MAT:0000009
ZEA:0015180
GRO:0005300[accessedResource: BTO:0001243][accessDate: 04-11-2010]
GRO:0005300
James Malone
BTO:0001243
A sending out of new growth or the growth sent out: as a stem or branch with its leaves and appendages especially when not yet mature.[accessedResource: BTO:0001243][accessDate: 04-11-2010]
A sending out of new growth or the growth sent out: as a stem or branch with its leaves and appendages especially when not yet mature.
shoot
James Malone
basal plate
NCIt:C34111
James Malone
Ele Holloway
DOHH2
Tomasz Adamusiak
pelvic fin bud
ZFA:0001384
James Malone
PC12
Ele Holloway
James Malone
NCI-H1703
James Malone
A subcategory of chronic obstructive pulmonary disease (COPD). It occurs in people who smoke and suffer from chronic bronchitis. It is characterized by inflation of the alveoli, alveolar wall damage, and reduction in the number of alveoli, resulting in difficulty breathing.[accessedResource: NCIt:C3348][accessDate: 04-11-2010]
Pulmonary Emphysema
emphysema
NCIt:C3348
Pulmonary Emphysema[accessedResource: NCIt:C3348][accessDate: 04-11-2010]
A subcategory of chronic obstructive pulmonary disease (COPD). It occurs in people who smoke and suffer from chronic bronchitis. It is characterized by inflation of the alveoli, alveolar wall damage, and reduction in the number of alveoli, resulting in difficulty breathing.
true
haematological neoplasm
DOID:253
1.8
Synonymous with lymphoid neoplasm EFO_0001642 - use instead.
James Malone
OntologyMappingImporter following DOID:253
obsolete_hematological neoplasm
Tomasz Adamusiak
somite 14
ZFA:0000726
EMAPA:16846
liver
MFO:0003060
EV:0100089
ZFA:0000123
EHDAA:2197
FMAID:7197
XAO:0000133
MAT:0000097
TAO:0000123
1: A large very vascular glandular organ of vertebrates that secretes bile and causes important changes in many of the substances contained in the blood (as by converting sugars into glycogen which it stores up until required and by forming urea).n2: Any of various large compound glands associated with the digestive tract of invertebrate animals and probably concerned with the secretion of digestive enzymes.
Lobular organ which has as its parts lobules connected to the biliary tree. Examples: There is only one liver.
BTO:0000759
MA:0000358
1: A large very vascular glandular organ of vertebrates that secretes bile and causes important changes in many of the substances contained in the blood (as by converting sugars into glycogen which it stores up until required and by forming urea).n2: Any of various large compound glands associated with the digestive tract of invertebrate animals and probably concerned with the secretion of digestive enzymes.[accessedResource: BTO:0000759][accessDate: 04-11-2010]
James Malone
Helen Parkinson
Illumina genome analyzer II
Is an instrument is which supports massively parallel sequencing of nucleic acids
high throughput sequencer
Tomasz Adamusiak
heart tube
ZFA:0000360
James Malone
GM12003
Tomasz Adamusiak
cyclazosin hydrochloride
DSSTox_CID:20453
DSSTox_Generic_SID:40453
James Malone
1-(4-amino-6,7-dimethoxy-2-quinazolinyl)-4-(2-furanylcarbonyl) decahydroquinoxaline
STRUCTURE_Formula:C23H28ClN5O4
STRUCTURE_ChemicalName_IUPAC:[(4aR,8aS)-4-(4-amino-6,7-dimethoxyquinazolin-2-yl)octahydroquinoxalin-1(2H)-yl](furan-2-yl)methanone hydrochloride
CASRN:146929-33-1
Ele Holloway
James Malone
CS57646 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158670&type=germplasm
CS57646
http://www.arabidopsis.org/servlets/TairObject?id=1005158670&type=germplasm
NCIt:C12388
SAEL:56
James Malone
The portion of the small intestine that extends from the duodenum to the ileum.
The section of the small intestine that comprises the first two fifths beyond the duodenum and that is larger, thicker-walled, and more vascular and has more circular folds than the ileum.
intestinum jejunum[accessedResource: BTO:0000657][accessDate: 04-11-2010]
jejunum
EV:0100074
The portion of the small intestine that extends from the duodenum to the ileum.[accessedResource: NCIt:C12388][accessDate: 04-11-2010]
intestinum jejunum
MA:0000340
FMAID:7207
BTO:0000657
MAT:0000045
The section of the small intestine that comprises the first two fifths beyond the duodenum and that is larger, thicker-walled, and more vascular and has more circular folds than the ileum.[accessedResource: BTO:0000657][accessDate: 04-11-2010]
James Malone
Tomasz Adamusiak
Jie Zheng
A gram is a mass unit which is equal to one-thousanth of a kilogram.
MO_825
g
gram
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#g[accessedResource: MO_825][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#g
A mass unit which is equal to one thousandth of a kilogram or 10^[-3] kg.
http://www.ebi.ac.uk/efo/EFO_0001705
true
Tomasz Adamusiak
foregut primordium
FBbt:00005535
FMAID:54326
James Malone
nail
claw
EV:0100159
EMAPA:18734
claw[accessedResource: MAT:0000158][accessDate: 04-11-2010]
Nail plate[accessedResource: FMAID:54326][accessDate: 04-11-2010]
MA:0002703
MAT:0000158
Nail plate
Denotes the inhabitants of Korea, a person from there, or their descendants elsewhere.[accessedResource: NCIt:C43395][accessDate: 04-11-2010]
Tomasz Adamusiak
Denotes the inhabitants of Korea, a person from there, or their descendants elsewhere.
Korean
NCIt:C43395
a protruding sac formed by the dilation of the wall of the aorta resulting from a weakening of the vessel wall[accessedResource: MP:0006278][accessDate: 04-11-2010]
James Malone
a protruding sac formed by the dilation of the wall of the aorta resulting from a weakening of the vessel wall
protruding sac formed by dilation of the aorta
aortic aneurysm
MP:0006278
James Malone
A bacterial disease is a disease factor that is caused primarily by bacteria.
bacterial disease
leg
James Malone
A limb of an animal used especially for supporting the body and for walking.
One of the two lower extremities in humans used for locomotion and support.[accessedResource: NCIt:C32974][accessDate: 04-11-2010]
NCIt:C32974
A limb of an animal used especially for supporting the body and for walking.[accessedResource: BTO:0000721][accessDate: 04-11-2010]
One of the two lower extremities in humans used for locomotion and support.
BTO:0000721
Tomasz Adamusiak
slow muscle cell somite 10
ZFA:0001047
James Malone
The main type of cell found in the inside lining of blood vessels, lymph vessels, and the heart.[accessedResource: BTO:0001176][accessDate: 04-11-2010]
BTO:0001176
An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal. In mammals, endothelial cell has vimentin filaments and is derived from the mesoderm.[accessedResource: CL:0000115][accessDate: 04-11-2010]
The main type of cell found in the inside lining of blood vessels, lymph vessels, and the heart.
Endotheliocyte
An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal. In mammals, endothelial cell has vimentin filaments and is derived from the mesoderm.
CL:0000115
endothelial cell
Endotheliocyte[accessedResource: CL:0000115][accessDate: 04-11-2010]
Ele Holloway
James Malone
WM793-P1N1
James Malone
dorsal ridge
FBbt:00000090
Either of the two hollow convoluted lateral halves of the cerebrum.[accessedResource: BTO:0000231][accessDate: 04-11-2010]
Ele Holloway
James Malone
Either of the two hollow convoluted lateral halves of the cerebrum.
cerebral hemisphere
BTO:0000231
James Malone
NCI-H2287
H2287
Tomasz Adamusiak
anterior pancreatic bud
ZFA:0001369
Tomasz Adamusiak
anaplastic large cell lymphoma
ICD9:200.6
etoposide
(8aR,9R)-9-[4-hydroxy-3,5-bis(methyloxy)phenyl]-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol-5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside
24/01/1963
33419-42-0
C29H32O13
ETOP
GeneRIF:15534117
GeneRIF:12665525
Myeloma[accessedResource: SNOMEDCT:109989006][accessDate: 04-11-2010]
Kahler's disease
GeneRIF:15041705
NCIt:C3242
GeneRIF:12560229
GeneRIF:12604407
GeneRIF:15920166
GeneRIF:12433678
GeneRIF:12199782
GeneRIF:16091744
GeneRIF:15479729
GeneRIF:15061198
GeneRIF:11877296
Myeloma
Multiple myeloma (disorder)[accessedResource: SNOMEDCT:109989006][accessDate: 04-11-2010]
GeneRIF:15215163
A bone marrow-based plasma cell neoplasm characterized by a serum monoclonal protein and skeletal destruction with osteolytic lesions, pathological fractures, bone pain, hypercalcemia, and anemia. Clinical variants include non-secretory myeloma, smoldering myeloma, indolent myeloma, and plasma cell leukemia. (WHO, 2001)
GeneRIF:12888915
GeneRIF:12743296
GeneRIF:15003892
GeneRIF:15788896
GeneRIF:12239172
GeneRIF:12707028
GeneRIF:12231535
GeneRIF:11830495
GeneRIF:11872084
GeneRIF:12200397
GeneRIF:16026644
Multiple myeloma, no ICD-O subtype (morphologic abnormality)
Plasma Cell Myeloma[accessedResource: NCIt:C3242][accessDate: 04-11-2010]
GeneRIF:12161360
GeneRIF:12002771
Plasmacytic myeloma[accessedResource: SNOMEDCT:109989006][accessDate: 04-11-2010]
GeneRIF:12393542
GeneRIF:15070697
GeneRIF:15735670
GeneRIF:16030194
GeneRIF:11985783
Multiple myeloma, morphology (morphologic abnormality)
GeneRIF:14512299
GeneRIF:11940485
Multiple myeloma, no ICD-O subtype
GeneRIF:15705883
GeneRIF:12200385
GeneRIF:12576455
GeneRIF:11877293
GeneRIF:15000866
Multiple myeloma (clinical)
GeneRIF:12377412
GeneRIF:14513045
GeneRIF:12433679
Multiple myeloma without mention of remission
GeneRIF:11902142
GeneRIF:14592826
MULT MYELM W/O REMISSION
ICD9:203.0
Multiple myeloma (clinical)[accessedResource: SNOMEDCT:109989006][accessDate: 04-11-2010]
GeneRIF:14692531
Myeloma, NOS[accessedResource: SNOMEDCT:55921005][accessDate: 04-11-2010]
SNOMEDCT:109989006
Multiple myeloma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:55921005][accessDate: 04-11-2010]
A myeloma that is located_in the plasma cells in bone marrow.
GeneRIF:15753365
GeneRIF:12855565
GeneRIF:12791655
Plasmacytic myeloma
GeneRIF:15458509
James Malone
GeneRIF:15138161
GeneRIF:12626569
GeneRIF:16002735
Multiple myeloma, no ICD-O subtype[accessedResource: SNOMEDCT:55921005][accessDate: 04-11-2010]
GeneRIF:12660820
Multiple myeloma without mention of remission[accessedResource: ICD9:203.00][accessDate: 04-11-2010]
[M]Plasma cell myeloma
GeneRIF:15731173
GeneRIF:12970749
GeneRIF:15172968
GeneRIF:15583754
GeneRIF:12969979
GeneRIF:15692072
SNOMEDCT:55921005
A myeloma that is located_in the plasma cells in bone marrow.[accessedResource: DOID:9538][accessDate: 04-11-2010]
GeneRIF:12351414
GeneRIF:12368157
A bone marrow-based plasma cell neoplasm characterized by a serum monoclonal protein and skeletal destruction with osteolytic lesions, pathological fractures, bone pain, hypercalcemia, and anemia. Clinical variants include non-secretory myeloma, smoldering myeloma, indolent myeloma, and plasma cell leukemia. (WHO, 2001)[accessedResource: NCIt:C3242][accessDate: 04-11-2010]
GeneRIF:11792572
GeneRIF:11896542
GeneRIF:15933061
GeneRIF:12651942
GeneRIF:14976049
GeneRIF:11877256
GeneRIF:12569357
GeneRIF:12543106
GeneRIF:15902294
multiple myeloma
GeneRIF:12574959
GeneRIF:11830493
GeneRIF:15692064
GeneRIF:11745168
Myeloma, NOS
GeneRIF:12430875
GeneRIF:15657357
Multiple myeloma, morphology (morphologic abnormality)[accessedResource: SNOMEDCT:55921005][accessDate: 04-11-2010]
GeneRIF:12517814
GeneRIF:12649140
GeneRIF:15070695
Multiple myeloma (disorder)
GeneRIF:15010462
GeneRIF:11830480
GeneRIF:12456503
GeneRIF:15725479
GeneRIF:15203873
DOID:9538
ICD9:203.00
GeneRIF:12070032
GeneRIF:11840273
GeneRIF:15940250
GeneRIF:15626731
GeneRIF:14656874
GeneRIF:14671622
GeneRIF:11839670
GeneRIF:15199411
GeneRIF:12931219
GeneRIF:15899516
GeneRIF:15205949
GeneRIF:14677065
Myelomatosis
GeneRIF:15677557
GeneRIF:12393489
GeneRIF:15471949
MULT MYELM W/O REMISSION[accessedResource: ICD9:203.00][accessDate: 04-11-2010]
GeneRIF:15475450
GeneRIF:15671442
GeneRIF:16044163
Myelomatosis[accessedResource: SNOMEDCT:109989006][accessDate: 04-11-2010]
GeneRIF:12459170
GeneRIF:15731178
GeneRIF:12471202
GeneRIF:15878977
GeneRIF:11877294
GeneRIF:12682635
GeneRIF:14514474
GeneRIF:12001122
GeneRIF:14755377
GeneRIF:11918087
Plasma Cell Myeloma
GeneRIF:15070700
Kahler's disease[accessedResource: SNOMEDCT:109989006][accessDate: 04-11-2010]
GeneRIF:12845688
GeneRIF:11568006
GeneRIF:14715624
GeneRIF:14513053
GeneRIF:15512823
[M]Plasma cell myeloma[accessedResource: SNOMEDCT:55921005][accessDate: 04-11-2010]
GeneRIF:12070027
A group of four powerful muscles in the front of the thigh. Their actions involve the extension of the knee joint.
BTO:0001149
The greater extensor muscle of the front of the thigh that is divided into four parts: rectus femoris, vastus intermedius, vastus lateralis, and vastus medialis.
Quadriceps Muscle of the Thigh
musculus quadriceps femoris
quadriceps
quadriceps muscle of thigh
The greater extensor muscle of the front of the thigh that is divided into four parts: rectus femoris, vastus intermedius, vastus lateralis, and vastus medialis.[accessedResource: BTO:0001149][accessDate: 04-11-2010]
quadriceps muscle of thigh[accessedResource: BTO:0001149][accessDate: 04-11-2010]
A group of four powerful muscles in the front of the thigh. Their actions involve the extension of the knee joint.[accessedResource: NCIt:C33441][accessDate: 04-11-2010]
NCIt:C33441
quadriceps[accessedResource: BTO:0001149][accessDate: 04-11-2010]
James Malone
quadricep muscle
musculus quadriceps femoris[accessedResource: BTO:0001149][accessDate: 04-11-2010]
Quadriceps Muscle of the Thigh[accessedResource: NCIt:C33441][accessDate: 04-11-2010]
ACHN
James Malone
Ele Holloway
Ele Holloway
James Malone
BE2C
spermatheca[accessedResource: TGMA:0000560][accessDate: 04-11-2010]
In most female insects, the usual sperm storage organ; a posteroventral ectodermal caecum of abdominal segment VIII located just behind the common oviduct; attached to the anterodorsal end of the vagina if the latter is developed; usually single but sometimes up to four are present. In mosquitoes, one, two or three may be present, each consisting of a spermathecal capsule at the end of a spermathecal duct.[accessedResource: TGMA:0000560][accessDate: 04-11-2010]
seminal receptacle[accessedResource: MAT:0000168][accessDate: 04-11-2010]
TGMA:0000560
spermathecum
spermatheca
James Malone
reptaculum seminis[accessedResource: TGMA:0000560][accessDate: 04-11-2010]
MAT:0000168
reptaculum seminis
In most female insects, the usual sperm storage organ; a posteroventral ectodermal caecum of abdominal segment VIII located just behind the common oviduct; attached to the anterodorsal end of the vagina if the latter is developed; usually single but sometimes up to four are present. In mosquitoes, one, two or three may be present, each consisting of a spermathecal capsule at the end of a spermathecal duct.
WBbt:0005319
FBbt:00004921
TADS:0000434
seminal receptacle
Ele Holloway
James Malone
KU812
CHEBI:27027
James Malone
http://www.ebi.ac.uk/efo/EFO_0001830
micronutrient
James Malone
An event that has caused the permanent cessation of all vital functions; the end of life. Can be applied to a whole organism or to a part of an organism.
event death
ochratoxin A
James Malone
(-)-N-((5-chloro-8-hydroxy-3-methyl-1-oxo-7-isochromanyl)carbonyl)-3-phenylalanine
InChIKey=SXHXNWAJMDYKPB-CEHVPASVDA
InChI=1/C20H18ClNO6/c1-10-7-12-14(21)9-13(17(23)16(12)20(27)28-10)18(24)22-15(19(25)26)8-11-5-3-2-4-6-11/h2-6,9-10,15,23H,7-8H2,1H3,(H,22,24)(H,25,26)/t10-,15+/m1/s1/f/h22,25H
C[C@@H]1Cc2c(Cl)cc(cc2C(=O)O1)C(=O)N[C@@H](Cc1ccccc1)C(O)=O
(R)-N-((5-chloro-3,4-dihydro-8-hydroxy-3-methyl-1-oxo-1H-2-benzopyran-7-yl)carbonyl)phenylalanine
N-(((3R)-5-chloro-8-hydroxy-3-methyl-1-oxo-7-isochromanyl)carbonyl)-3-phenyl-L-alanine
N-{[(3R)-5-chloro-8-hydroxy-3-methyl-1-oxo-3,4-dihydro-1H-2-benzopyran-7-yl]carbonyl}-L-phenylalanine
C20H18ClNO6
InChI=1/C20H18ClNO5/c1-11-7-14-15(20(26)27-11)9-13(10-16(14)21)18(23)22-17(19(24)25)8-12-5-3-2-4-6-12/h2-6,9-11,17H,7-8H2,1H3,(H,22,23)(H,24,25)/t11-,17+/m1/s1/f/h22,24H
CHEBI:7719
http://www.ebi.ac.uk/efo/EFO_0001584
A phenylalanine derivative that has formula C20H18ClNO6.
C[C@@H]1Cc2c(Cl)cc(C(=O)N[C@@H](Cc3ccccc3)C(O)=O)c(O)c2C(=O)O1
InChIKey=RWQKHEORZBHNRI-RKENYTOSDR
MDAMB453
James Malone
WBbt:0005760
Duplicate use EFO_0000892
1.8
James Malone
OntologyMappingImporter following MAT:0000342
obsolete_somatic nervous system
true
MAT:0000342
Ele Holloway
James Malone
MEG01
Ele Holloway
James Malone
CHP212
Tomasz Adamusiak
ventricular zone
ZFA:0001083
cytostatic
antineoplastic agents
CHEBI:35610
A substance that inhibits or prevents the proliferation of neoplasms.
James Malone
antineoplastic drug
http://www.ebi.ac.uk/efo/EFO_0001847
antineoplastic
Experiment[accessedResource: NIFSTD:birnlex_2117][accessDate: 04-11-2010]
experimental process
NIFSTD:birnlex_2117
Experiment
Ara-C-sensitive parental cell line
Ele Holloway
James Malone
SW872
piperonylbutoxide
1166
21166
5-{[(2-{[2-(butyloxy)ethyl]oxy}ethyl)oxy]methyl}-6-propyl-1,3-benzodioxole
51-03-6
C19H30O5
James Malone
Jie Zheng
Tomasz Adamusiak
change in temperature, change in watering regime
Environmental stress is a treatment where some aspect of the environment is perturbed in order to stress the organism or culture, e.g. change in temperature, change in watering regime
environmental stress
MO_227
CHEBI:50683
James Malone
http://www.ebi.ac.uk/efo/EFO_0001893
folic acid reductase inhibitor
Tomasz Adamusiak
embryonic Malpighian tubule tip cell
FBbt:00005643
COLO-704
James Malone
Ele Holloway
COLO704
James Malone
CEM-c1
ATCC number: CRL-2265
intervertebral disc
FMA:10446
MA:0000110
Intervertebral disk[accessedResource: FMA:10446][accessDate: 04-11-2010]
Intervertebral disk
James Malone
James Malone
CS57854 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158878&type=germplasm
CS57854
http://www.arabidopsis.org/servlets/TairObject?id=1005158878&type=germplasm
carcinoma of colon[accessedResource: DOID:1520][accessDate: 04-11-2010]
Carcinoma of the Colon
Carcinoma of the Colon[accessedResource: NCIt:C4910][accessDate: 04-11-2010]
Colorectal Carcinoma
Colorectal Neoplasm[accessedResource: MSH:D015179][accessDate: 04-11-2010]
A malignant tumor usually arising from the epithelium lining the large intestinal mucosa. Colon carcinoma is one of the most common malignancies in both males and females, and is especially common in North America and Europe. Grossly, most colon carcinomas are polypoid or ulcerating lesions. Microscopically, adenocarcinoma is the most frequently seen morphologic subtype. Prognosis depends on the stage of the disease (depth of invasion, metastasis to regional/distal lymph nodes or other anatomic sites). -- 2004
carcinoma of colon (disorder)
Colonic adenocarcinoma
An adenocarcinoma arising from the colon. It is more frequently seen in populations with a Western type diet and in patients with a history of chronic inflammatory bowel disease. Signs and symptoms include intestinal bleeding, anemia, and change in bowel habits. According to the degree of cellular differentiation, colonic adenocarcinomas are divided into well differentiated, moderately, and poorly differentiated. Morphologic variants include the mucinous adenocarcinoma and signet-ring adenocarcinoma. Lymphatic or hematogenous spread can occur early in the process and lead to systemic disease.[accessedResource: NCIt:C4349][accessDate: 04-11-2010]
Colorectal Carcinomas[accessedResource: MSH:D015179][accessDate: 04-11-2010]
A malignant tumor usually arising from the epithelium lining the large intestinal mucosa. Colon carcinoma is one of the most common malignancies in both males and females, and is especially common in North America and Europe. Grossly, most colon carcinomas are polypoid or ulcerating lesions. Microscopically, adenocarcinoma is the most frequently seen morphologic subtype. Prognosis depends on the stage of the disease (depth of invasion, metastasis to regional/distal lymph nodes or other anatomic sites). -- 2004[accessedResource: NCIt:C4910][accessDate: 04-11-2010]
DOID:234
Tumors or cancer of the COLON or the RECTUM or both. Risk factors for colorectal cancer include chronic ULCERATIVE COLITIS; FAMILIAL POLYPOSIS COLI; exposure to ASBESTOS; and irradiation of the CERVIX UTERI.[accessedResource: MSH:D015179][accessDate: 04-11-2010]
colon adenocarcinoma
DOID:9256
Colorectal Neoplasm
Colon Cancer[accessedResource: NCIt:C4910][accessDate: 04-11-2010]
carcinoma of colon (disorder)[accessedResource: DOID:1520][accessDate: 04-11-2010]
Colonic Carcinoma[accessedResource: NCIt:C4910][accessDate: 04-11-2010]
DOID:1520
adenocarcinoma of colon
Tumor, Colorectal
Colorectal Carcinoma[accessedResource: MSH:D015179][accessDate: 04-11-2010]
colon carcinoma
Colonic Carcinoma
NCIt:C4349
An adenocarcinoma arising from the colon. It is more frequently seen in populations with a Western type diet and in patients with a history of chronic inflammatory bowel disease. Signs and symptoms include intestinal bleeding, anemia, and change in bowel habits. According to the degree of cellular differentiation, colonic adenocarcinomas are divided into well differentiated, moderately, and poorly differentiated. Morphologic variants include the mucinous adenocarcinoma and signet-ring adenocarcinoma. Lymphatic or hematogenous spread can occur early in the process and lead to systemic disease.
colorectal adenocarcinoma
Colorectal Cancer[accessedResource: MSH:D015179][accessDate: 04-11-2010]
Colon Cancer
Neoplasms, Colorectal[accessedResource: MSH:D015179][accessDate: 04-11-2010]
Cancers, Colorectal
Cancers, Colorectal[accessedResource: MSH:D015179][accessDate: 04-11-2010]
Colorectal Tumors
rectal carcinoma
Tumors, Colorectal[accessedResource: MSH:D015179][accessDate: 04-11-2010]
adenocarcinoma of the colon[accessedResource: DOID:234][accessDate: 04-11-2010]
NEOPL COLORECTAL[accessedResource: MSH:D015179][accessDate: 04-11-2010]
MSH:D015179
Colonic Adenocarcinoma[accessedResource: NCIt:C4349][accessDate: 04-11-2010]
adenocarcinoma of the colon
Neoplasms, Colorectal
carcinoma of colon
Tomasz Adamusiak
colon carcinoma[accessedResource: DOID:1520][accessDate: 04-11-2010]
Carcinomas, Colorectal
Cancer, Colorectal
COLORECTAL NEOPL
adenocarcinoma of colon[accessedResource: DOID:234][accessDate: 04-11-2010]
Colorectal Tumor[accessedResource: MSH:D015179][accessDate: 04-11-2010]
NCIt:C4910
Colon Adenocarcinoma[accessedResource: NCIt:C4349][accessDate: 04-11-2010]
Tumors or cancer of the COLON or the RECTUM or both. Risk factors for colorectal cancer include chronic ULCERATIVE COLITIS; FAMILIAL POLYPOSIS COLI; exposure to ASBESTOS; and irradiation of the CERVIX UTERI.
DSSTox_Generic_SID:36711
aphidicolin
STRUCTURE_ChemicalName_IUPAC:(3R,4R,4aR,6aS,8R,9R,11aS,11bS)-4,9-bis(hydroxymethyl)-4,11b-dimethyltetradecahydro-8,11a-methanocyclohepta[a]naphthalene-3,9-diol
James Malone
Ele Holloway
STRUCTURE_Formula:C20H34O4
DSSTox_CID:16711
Tomasz Adamusiak
AC
CASRN:38966-21-1
genotyping by high throughput sequencing
James Malone
CS57840 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158864&type=germplasm
CS57840
http://www.arabidopsis.org/servlets/TairObject?id=1005158864&type=germplasm
Ele Holloway
James Malone
SK-MEL-2
AILT[accessedResource: NCIt:C7528][accessDate: 04-11-2010]
Angioimmunoblastic Lymphadenopathy Type T-Cell Lymphoma
angioimmunoblastic T-cell lymphoma
A mature T-cell non-Hodgkin lymphoma, characterized by systemic disease and a polymorphous infiltrate involving lymph nodes. It occurs in the middle aged and elderly, with an equal incidence in males and females. The clinical course is typically aggressive. (WHO, 2001)[accessedResource: NCIt:C7528][accessDate: 04-11-2010]
Angioimmunoblastic Lymphadenopathy[accessedResource: NCIt:C7528][accessDate: 04-11-2010]
Angioimmunoblastic Lymphadenopathy
A mature T-cell non-Hodgkin lymphoma, characterized by systemic disease and a polymorphous infiltrate involving lymph nodes. It occurs in the middle aged and elderly, with an equal incidence in males and females. The clinical course is typically aggressive. (WHO, 2001)
NCIt:C7528
Angioimmunoblastic Lymphadenopathy with Dysproteinemia
Angioimmunoblastic Lymphadenopathy Type T-Cell Lymphoma[accessedResource: NCIt:C7528][accessDate: 04-11-2010]
Angioimmunoblastic Lymphadenopathy with Dysproteinemia[accessedResource: NCIt:C7528][accessDate: 04-11-2010]
AILT
James Malone
AILD
AILD[accessedResource: NCIt:C7528][accessDate: 04-11-2010]
James Malone
Okamoto-Aoki
RGD:1581618
Epithelium of pancreatic duct[accessedResource: FMAID:67681][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
pancreatic duct epithelium
FMAID:67681
Epithelium of pancreatic duct
Pancreatic ductal epithelium
James Malone
http://www.ebi.ac.uk/efo/EFO_0002636
Caenorhabditis elegans is a free-living, transparent nematode (roundworm), about 1 mm in length, which lives in temperate soil environments
Caenorhabditis elegans
C. elegans
James Malone
Ele Holloway
CMLT1
Tomasz Adamusiak
cumulus-oocyte complex
http://en.wikipedia.org/wiki/Ovulation
Tomasz Adamusiak
stomatogastric nervous system primordium
FBbt:00005536
STRUCTURE_Formula:C25H25F3N4O8
7-trifluoromethyl-4-(4-methyl-1-piperazinyl)pyrrolo[1,2 -a]-quinoxaline dimaleate
Ele Holloway
CGS 12066B dimaleate
CASRN:109028-10-6
Tomasz Adamusiak
DSSTox_Generic_SID:42589
DSSTox_CID:22589
James Malone
STRUCTURE_ChemicalName_IUPAC:4-(4-methylpiperazin-1-yl)-7-(trifluoromethyl)pyrrolo[1,2-a]quinoxaline di[(2Z)-but-2-enedioate]
James Malone
dorsal prothoracic pharyngeal muscle
FBbt:00000489
James Malone
GM12750
Ele Holloway
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0002728
endothelin-1
CHEBI:153671
SMARD 1
OMIMID:604320
Tomasz Adamusiak
spinal muscular atrophy with respiratory distress
spinal muscular atrophy with respiratory distress type 1
BTBR[accessedResource: NCIt:C37364][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
BTBR mouse
NCIt:C37364
BTBR
sedatives and hypnotics
sedative drug
A drug used to induce drowsiness or sleep or to reduce psychological excitement or anxiety.
http://www.ebi.ac.uk/efo/EFO_0001854
hypnotics
James Malone
CHEBI:35717
sedatives
James Malone
CS57875 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158899&type=germplasm
CS57875
http://www.arabidopsis.org/servlets/TairObject?id=1005158899&type=germplasm
High output heart failure (disorder)[accessedResource: SNOMEDCT:10091002][accessDate: 04-11-2010]
Tomasz Adamusiak
high output heart failure
SNOMEDCT:10091002
High output heart failure (disorder)
high output cardiac failure
B-ALL
DOID:7061
A neoplasm of lymphoblasts committed to the B-cell lineage, typically composed of small to medium-sized blast cells. When the neoplasm involves predominantly the bone marrow and the peripheral blood, it is called precursor B lymphoblastic leukemia (B-cell acute lymphoblastic leukemia). When it involves nodal or extranodal sites, it is called B lymphoblastic lymphoma. (WHO, 2001) -- 2003
B Lymphoblastic Leukemia/Lymphoma[accessedResource: NCIt:C8936][accessDate: 04-11-2010]
James Malone
Precursor B-Lymphoblastic Lymphoma/Leukemia[accessedResource: NCIt:C8936][accessDate: 04-11-2010]
NCIt:C8936
B-precursor acute lymphoblastic leukemia
A neoplasm of lymphoblasts committed to the B-cell lineage, typically composed of small to medium-sized blast cells. When the neoplasm involves predominantly the bone marrow and the peripheral blood, it is called precursor B lymphoblastic leukemia (B-cell acute lymphoblastic leukemia). When it involves nodal or extranodal sites, it is called B lymphoblastic lymphoma. (WHO, 2001) -- 2003[accessedResource: NCIt:C8936][accessDate: 04-11-2010]
Precursor B-Lymphoblastic Lymphoma/Leukemia
B Lymphoblastic Leukemia/Lymphoma
B-cell acute lymphoblastic leukemia
James Malone
storage organ
MAT:0000366
Ele Holloway
James Malone
Toledo
CHEBI:37700
James Malone
http://www.ebi.ac.uk/efo/EFO_0001859
protein kinase C inhibitor
protein kinase C inhibitors
Renal cell carcinoma, chromophobe cell[accessedResource: SNOMEDCT:128667008][accessDate: 04-11-2010]
Chromophobe Carcinoma of Kidney[accessedResource: NCIt:C4146][accessDate: 04-11-2010]
Chromophobe Adenocarcinoma[accessedResource: NCIt:C4146][accessDate: 04-11-2010]
Chromophobe carcinoma[accessedResource: SNOMEDCT:1443001][accessDate: 04-11-2010]
Chromophobe carcinoma
Renal cell carcinoma, chromophobe cell (morphologic abnormality)
Chromophobe Cell Carcinoma of Kidney[accessedResource: NCIt:C4146][accessDate: 04-11-2010]
renal cell carcinoma, chromophobe cell
Chromophobe Cell Carcinoma of the Kidney
Chromophobe Cell Carcinoma of Kidney
Chromophobe carcinoma (morphologic abnormality)[accessedResource: DOID:4471][accessDate: 04-11-2010]
Chromophobe Carcinoma of the Kidney
chromophobe adenocarcinoma
Renal cell carcinoma, chromophobe cell (morphologic abnormality)[accessedResource: SNOMEDCT:128667008][accessDate: 04-11-2010]
Chromophobe Cell Carcinoma of the Kidney[accessedResource: NCIt:C4146][accessDate: 04-11-2010]
Renal Cell Carcinoma, Chromophobe Type[accessedResource: NCIt:C4146][accessDate: 04-11-2010]
Chromophobe adenocarcinoma is a renal cell carcinoma described as the third most common type of renal cell carcinoma. The cancerous cells are similar with the clear cells, they appear pale when viewed under microscope, but there are larger and display different features than clear cells. This type of cancer rarely metastasizes, and the tumors can be successfully removed with surgery.
SNOMEDCT:1443001
NCIt:C4146
Chromophobe adenocarcinoma is a renal cell carcinoma described as the third most common type of renal cell carcinoma. The cancerous cells are similar with the clear cells, they appear pale when viewed under microscope, but there are larger and display different features than clear cells. This type of cancer rarely metastasizes, and the tumors can be successfully removed with surgery.[accessedResource: DOID:4471][accessDate: 04-11-2010]
Chromophobe Carcinoma of the Kidney[accessedResource: NCIt:C4146][accessDate: 04-11-2010]
A type of carcinoma that comprises a minority of renal cell carcinomas. It is characterized by loss of chromosomes 1 and Y. Based on the cytoplasmic characteristics of the neoplastic cells, this type of carcinoma is classified as classic (typical) or eosinophilic. It has a much better prognosis than other renal cell carcinomas.
chromophobe renal cell carcinoma
James Malone
Chromophobe Carcinoma of Kidney
A type of carcinoma that comprises a minority of renal cell carcinomas. It is characterized by loss of chromosomes 1 and Y. Based on the cytoplasmic characteristics of the neoplastic cells, this type of carcinoma is classified as classic (typical) or eosinophilic. It has a much better prognosis than other renal cell carcinomas.[accessedResource: NCIt:C4146][accessDate: 04-11-2010]
SNOMEDCT:128667008
DOID:4471
Chromophobe carcinoma (morphologic abnormality)
Renal Cell Carcinoma, Chromophobe Type
DOID:9997
peripartum cardiomyopathy
Puerperal cardiomyopathy[accessedResource: SNOMEDCT:62377009][accessDate: 04-11-2010]
antepartum peripartum cardiomyopathy
Postpartum cardiomyopathy (disorder)
postpartum peripartum cardiomyopathy[accessedResource: DOID:9997][accessDate: 04-11-2010]
Postpartum cardiomyopathy (disorder)[accessedResource: SNOMEDCT:62377009][accessDate: 04-11-2010]
Postpartum cardiomyopathy
Postpartum cardiomyopathy[accessedResource: SNOMEDCT:62377009][accessDate: 04-11-2010]
Puerperal cardiomyopathy
antepartum peripartum cardiomyopathy[accessedResource: DOID:9997][accessDate: 04-11-2010]
SNOMEDCT:62377009
postpartum peripartum cardiomyopathy
Tomasz Adamusiak
nandrolone
434-22-0
19-nortestosterone
Tomasz Adamusiak
Drosophila embryonic structure
true
weight percent
olfactory bulb
An anterior projection of each cerebral hemisphere that is continuous anteriorly with the olfactory nerve;nA term applied to the olfactory apparatus on the lower surface of the frontal lobe of the brain. It consists of the olfactory bulb, tract, and trigone.[accessedResource: BTO:0001362][accessDate: 04-11-2010]
FMAID:77624
James Malone
bulbus olfactorius
olfactory lobe
CNS - Brain - Olfactory Bulb (MMHCC)
EMAPA:17778
CNS - Brain - Olfactory Bulb (MMHCC)[accessedResource: NCIt:C22619][accessDate: 04-11-2010]
Brain structure which is the paired anteriormost part of the telencephalon and are connected to the telencephalon by two tracts carrying secondary olfactory fibers. From Neuroanatomy of the Zebrafish Brain.[accessedResource: ZFA:0000402][accessDate: 04-11-2010]
An anterior projection of each cerebral hemisphere that is continuous anteriorly with the olfactory nerve;nA term applied to the olfactory apparatus on the lower surface of the frontal lobe of the brain. It consists of the olfactory bulb, tract, and trigone.
ZFA:0000402
SAEL:75
EHDAA:5480
Brain structure which is the paired anteriormost part of the telencephalon and are connected to the telencephalon by two tracts carrying secondary olfactory fibers. From Neuroanatomy of the Zebrafish Brain.
EV:0100173
bulbus olfactorius[accessedResource: ZFA:0000402][accessDate: 04-11-2010]
Olfactory bulb[accessedResource: FMAID:77624][accessDate: 04-11-2010]
Segment of neural tree organ which is continuous with a set of olfactory nerves and an olfactory tract.
MAT:0000116
BTO:0001362
NCIt:C22619
GeneRIF:14669317
Gastritis (disorder)[accessedResource: SNOMEDCT:4556007][accessDate: 04-11-2010]
GeneRIF:12671895
chronic gastritis NOS (disorder)
Gastritis, NOS
chronic gastritis (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
Erosive Gastritis
acute gastritis with hemorrhage
GeneRIF:14536000
Other specified gastritis, with hemorrhage[accessedResource: DOID:4029][accessDate: 04-11-2010]
Erosive gastropathy (disorder)
GeneRIF:15383700
Gastric catarrh[accessedResource: SNOMEDCT:4556007][accessDate: 04-11-2010]
Other specified gastritis NOS (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
acute gastritis (disorder)
chronic Gastritis
Gastritides
acute hemorrhagic gastritis (disorder)
Gastric catarrh
acute gastric mucosal erosion (disorder)
chronic gastritis NOS (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
SNOMEDCT:196743006
Gastritis unspecified[accessedResource: SNOMEDCT:196743006][accessDate: 04-11-2010]
Inflammation of the stomach.
Gastritis[accessedResource: MSH:D005756][accessDate: 04-11-2010]
Gastritis unspecified (disorder)
acute gastritis
Gastritis unspecified (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
acute gastritis[accessedResource: DOID:4029][accessDate: 04-11-2010]
acute hemorrhagic gastritis [dup] (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
MSH:D005756
GeneRIF:12519893
NCIt:C26780
Gastritis [Ambiguous][accessedResource: DOID:4029][accessDate: 04-11-2010]
Gastritides[accessedResource: MSH:D005756][accessDate: 04-11-2010]
acute gastritis (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
DOID:4029
Gastritis
Other specified gastritis, without mention of hemorrhage[accessedResource: DOID:4029][accessDate: 04-11-2010]
GeneRIF:12488564
Gastritis (disorder)
Other specified gastritis NOS (disorder)
acute haemorrhagic gastritis[accessedResource: DOID:4029][accessDate: 04-11-2010]
Idiopathic erosive/hemorrhagic gastritis (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
acute gastritis without mention of hemorrhage
Erosive gastropathy (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
acute hemorrhagic gastritis (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
James Malone
Other specified gastritis[accessedResource: DOID:4029][accessDate: 04-11-2010]
Other specified gastritis
acute haemorrhagic gastritis
Idiopathic erosive/hemorrhagic gastritis (disorder)
chronic Gastritis[accessedResource: DOID:4029][accessDate: 04-11-2010]
Gastritis unspecified
acute hemorrhagic gastritis [dup] (disorder)
Inflammation of the GASTRIC MUCOSA, a lesion observed in a number of unrelated disorders.
GeneRIF:12390304
GASTRITIS HEMORRHAGIC[accessedResource: DOID:4029][accessDate: 04-11-2010]
Inflammation of the stomach.[accessedResource: NCIt:C26780][accessDate: 04-11-2010]
Other specified gastritis (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
GeneRIF:12011009
Erosive Gastritis[accessedResource: DOID:4029][accessDate: 04-11-2010]
acute gastric mucosal erosion (disorder)[accessedResource: DOID:4029][accessDate: 04-11-2010]
GeneRIF:15720413
GASTRITIS HEMORRHAGIC
GeneRIF:15351034
Other specified gastritis, without mention of hemorrhage
Inflammation of the GASTRIC MUCOSA, a lesion observed in a number of unrelated disorders.[accessedResource: MSH:D005756][accessDate: 04-11-2010]
GeneRIF:15287151
SNOMEDCT:4556007
Gastritis [Ambiguous]
acute gastritis, without mention of hemorrhage[accessedResource: DOID:4029][accessDate: 04-11-2010]
GeneRIF:12958020
GeneRIF:16201065
active gastritis
GeneRIF:11908710
GeneRIF:15216464
Other specified gastritis (disorder)
chronic gastritis (disorder)
acute gastritis with hemorrhage[accessedResource: DOID:4029][accessDate: 04-11-2010]
Gastritis, NOS[accessedResource: SNOMEDCT:4556007][accessDate: 04-11-2010]
GeneRIF:16275761
Other specified gastritis, with hemorrhage
GeneRIF:16302981
Cuboidal endothelial cell of vascular tree[accessedResource: CL:0000071][accessDate: 04-11-2010]
The endothelial cells that line the vasculature.
primary blood vessel endothelial cell
umbilical vein endothelial cell
The endothelial cells that line the vasculature.[accessedResource: CL:0000071][accessDate: 04-11-2010]
James Malone
CL:0000071
primary microvascular endothelial cell
blood vessel endothelial cell
Cuboidal endothelial cell of vascular tree
Bicuculline is a light-sensitive competitive antagonist of GABAA receptors. It was originally identified in 1932 in plant alkaloid extracts and has been isolated from Dicentra cucullaria, Adlumia fungosa, Fumariaceae, and several Corydalis species.
d-Bicuculline
bicuculline
http://www.ebi.ac.uk/efo/EFO_0002725
C20H17NO6
Ele Holloway
CHEBI:3092
InChI=1/C20H17NO6/c1-21-5-4-10-6-14-15(25-8-24-14)7-12(10)17(21)18-11-2-3-13-19(26-9-23-13)16(11)20(22)27-18/h2-3,6-7,17-18H,4-5,8-9H2,1H3/t17-,18+/m0/s1
Tomasz Adamusiak
InChIKey=IYGYMKDQCDOMRE-ZWKOTPCHBP
(6R)-6-[(5S)-6-methyl-5,6,7,8-tetrahydro[1,3]dioxolo[4,5-g]isoquinolin-5-yl]furo[3,4-e][1,3]benzodioxol-8(6H)-one
Bicucullin
[H][C@]1(OC(=O)c2c3OCOc3ccc12)[C@@]1([H])N(C)CCc2cc3OCOc3cc12
Bicculine
4-(4-hydroxy-3-iodophenoxy)-3,5-diiodo-L-phenylalanine
liotironina
InChIKey=AUYYCJSJGJYCDS-YROMPDBNDH
3,5,3'TRIIODOTHYRONINE
Tertroxin
http://www.ebi.ac.uk/efo/EFO_0002395
Ele Holloway
O-(4-hydroxy-3-iodophenyl)-3,5-diiodo-L-tyrosine
James Malone
Tresitope
C15H12I3NO4
An iodothyronine compound having iodo substituents at the 3-, 3'- and 5-positions. Although some is produced in the thyroid, most of the 3,3',5-triiodo-L-thyronine in the body is generated by mono-deiodination of L-thyroxine in the peripheral tissues. Its metabolic activity is about 3 to 5 times that of L-thyroxine. The sodium salt is used in the treatment of hypothyroidism.
L-T3
An iodothyronine compound having iodo substituents at the 3-, 3'- and 5-positions.
An iodothyronine that has formula C15H12I3NO4.
L-3,5,3'-Triiodothyronine
T3
CHEBI:18258
Triiodothyronine
N[C@@H](Cc1cc(I)c(Oc2ccc(O)c(I)c2)c(I)c1)C(O)=O
liothyronine
liothyroninum
3,3',5-triiodo-L-thyronine
InChI=1/C15H12I3NO4/c16-9-6-8(1-2-13(9)20)23-14-10(17)3-7(4-11(14)18)5-12(19)15(21)22/h1-4,6,12,20H,5,19H2,(H,21,22)/t12-/m0/s1/f/h21H
SUM44PE
James Malone
James Malone
A HeLa is a cell line.
A HeLa is all of the following: something that is bearer of a cervical carcinoma, something that derives from
a Homo sapiens, something that derives from an epithelial cell, and something that derives from a cervix.
Natural Language Generator 8th April 2010
HeLa
AIDS (disorder)[accessedResource: SNOMEDCT:62479008][accessDate: 04-11-2010]
GeneRIF:15637236
GeneRIF:15809899
acquired human immunodeficiency virus infection syndrome NOS (disorder)
GeneRIF:14555765
An HIV infectious disease that is a characterized cytologically by a reduction in the numbers of CD4-bearing helper T cells to 20 percent or less of normal thereby rendering the subject highly vulnerable to life-threatening conditions (as Pneumocystis carinii pneumonia) and to some that become life threatening (as Kaposi's sarcoma) and that is caused by infection with HIV commonly transmitted in infected blood especially during illicit intravenous drug use and in bodily secretions (as semen) during sexual intercourse.
GeneRIF:12427286
Acquired immune deficiency syndrome (AIDS)
GeneRIF:14990729
GeneRIF:15865925
Acquired immune deficiency syndrome (AIDS) (disorder)[accessedResource: SNOMEDCT:62479008][accessDate: 04-11-2010]
acquired immune deficiency syndrome[accessedResource: DOID:635][accessDate: 04-11-2010]
GeneRIF:15814716
A syndrome resulting from the acquired deficiency of cellular immunity caused by the human immunodeficiency virus (HIV). It is characterized by the reduction of the Helper T-lymphocytes in the peripheral blood and the lymph nodes. Symptoms include generalized lymphadenopathy, fever, weight loss, and chronic diarrhea. Patients with AIDS are especially susceptible to opportunistic infections (usually pneumocystis carinii pneumonia, cytomegalovirus (CMV) infections, tuberculosis, candida infections, and cryptococcosis), and the development of malignant neoplasms (usually non-Hodgkin's lymphoma and Kaposi's sarcoma). The human immunodeficiency virus is transmitted through sexual contact, sharing of contaminated needles, or transfusion of contaminated blood. -- 2004
GeneRIF:12854077
GeneRIF:14506268
ACQUIRED IMMUNODEFICIENCY SYNDROME, AIDS[accessedResource: NCIt:C2851][accessDate: 04-11-2010]
Immunologic Deficiency Syndrome, Acquired
GeneRIF:11950939
ACQUIRED IMMUNO DEFIC SYNDROME[accessedResource: MSH:D000163][accessDate: 04-11-2010]
An acquired defect of cellular immunity associated with infection by the human immunodeficiency virus (HIV), a CD4-positive T-lymphocyte count under 200 cells/microliter or less than 14% of total lymphocytes, and increased susceptibility to opportunistic infections and malignant neoplasms. Clinical manifestations also include emaciation (wasting) and dementia. These elements reflect criteria for AIDS as defined by the CDC in 1993.[accessedResource: MSH:D000163][accessDate: 04-11-2010]
Acquired Immuno-Deficiency Syndrome
GeneRIF:12964118
Acquired human immunodeficiency virus infection syndrome NOS
Acquired Immunodeficiency Syndromes[accessedResource: MSH:D000163][accessDate: 04-11-2010]
SNOMEDCT:186715004
A syndrome resulting from the acquired deficiency of cellular immunity caused by the human immunodeficiency virus (HIV). It is characterized by the reduction of the Helper T-lymphocytes in the peripheral blood and the lymph nodes. Symptoms include generalized lymphadenopathy, fever, weight loss, and chronic diarrhea. Patients with AIDS are especially susceptible to opportunistic infections (usually pneumocystis carinii pneumonia, cytomegalovirus (CMV) infections, tuberculosis, candida infections, and cryptococcosis), and the development of malignant neoplasms (usually non-Hodgkin's lymphoma and Kaposi's sarcoma). The human immunodeficiency virus is transmitted through sexual contact, sharing of contaminated needles, or transfusion of contaminated blood.
ACQUIRED IMMUNODEFIC SYNDROME
AIDS (disorder)
ACQUIRED IMMUNE DEFIC SYNDROME
acquired immunedeficiency syndrome
Acquired immune deficiency syndrome (AIDS) (disorder)
AIDS, NOS
GeneRIF:12134147
GeneRIF:14523088
GeneRIF:12372282
Immunodeficiency due to human immunodeficiency virus infection
acquired human immunodeficiency virus infection syndrome NOS (disorder)[accessedResource: DOID:635][accessDate: 04-11-2010]
IMMUNOL DEFIC SYNDROME ACQUIRED[accessedResource: MSH:D000163][accessDate: 04-11-2010]
AIDS
GeneRIF:12634405
GeneRIF:12749011
GeneRIF:14699011
DOID:635
James Malone
NCIt:C2851
acquired Immune deficiency
ACQUIRED IMMUNO DEFIC SYNDROME
GeneRIF:12761559
MSH:D000163
Acquired Immunodeficiency Syndrome[accessedResource: MSH:D000163][accessDate: 04-11-2010]
GeneRIF:11744690
IMMUNOL DEFIC SYNDROME ACQUIRED
SNOMEDCT:62479008
Immunodeficiency Syndromes, Acquired
ACQUIRED IMMUNODEFICIENCY SYNDROME, AIDS
A syndrome resulting from the acquired deficiency of cellular immunity caused by the human immunodeficiency virus (HIV). It is characterized by the reduction of the Helper T-lymphocytes in the peripheral blood and the lymph nodes. Symptoms include generalized lymphadenopathy, fever, weight loss, and chronic diarrhea. Patients with AIDS are especially susceptible to opportunistic infections (usually pneumocystis carinii pneumonia, cytomegalovirus (CMV) infections, tuberculosis, candida infections, and cryptococcosis), and the development of malignant neoplasms (usually non-Hodgkin&apos;s lymphoma and Kaposi&apos;s sarcoma). The human immunodeficiency virus is transmitted through sexual contact, sharing of contaminated needles, or transfusion of contaminated blood.
GeneRIF:12750160
Acquired immunodeficiency syndrome, NOS
IMMUNODEFIC SYNDROME ACQUIRED[accessedResource: MSH:D000163][accessDate: 04-11-2010]
An HIV infectious disease that is a characterized cytologically by a reduction in the numbers of CD4-bearing helper T cells to 20 percent or less of normal thereby rendering the subject highly vulnerable to life-threatening conditions (as Pneumocystis carinii pneumonia) and to some that become life threatening (as Kaposi's sarcoma) and that is caused by infection with HIV commonly transmitted in infected blood especially during illicit intravenous drug use and in bodily secretions (as semen) during sexual intercourse.[accessedResource: DOID:635][accessDate: 04-11-2010]
Immunologic Deficiency Syndrome, Acquired[accessedResource: MSH:D000163][accessDate: 04-11-2010]
acquired immune defic. syndr.[accessedResource: DOID:635][accessDate: 04-11-2010]
An acquired defect of cellular immunity associated with infection by the human immunodeficiency virus (HIV), a CD4-positive T-lymphocyte count under 200 cells/microliter or less than 14% of total lymphocytes, and increased susceptibility to opportunistic infections and malignant neoplasms. Clinical manifestations also include emaciation (wasting) and dementia. These elements reflect criteria for AIDS as defined by the CDC in 1993.
acquired immune deficiency syndrome
A syndrome resulting from the acquired deficiency of cellular immunity caused by the human immunodeficiency virus (HIV). It is characterized by the reduction of the Helper T-lymphocytes in the peripheral blood and the lymph nodes. Symptoms include generalized lymphadenopathy, fever, weight loss, and chronic diarrhea. Patients with AIDS are especially susceptible to opportunistic infections (usually pneumocystis carinii pneumonia, cytomegalovirus (CMV) infections, tuberculosis, candida infections, and cryptococcosis), and the development of malignant neoplasms (usually non-Hodgkin's lymphoma and Kaposi's sarcoma). The human immunodeficiency virus is transmitted through sexual contact, sharing of contaminated needles, or transfusion of contaminated blood.[accessedResource: NCIt:C2851][accessDate: 04-11-2010]
GeneRIF:15793370
Immunodeficiency due to human immunodeficiency virus infection[accessedResource: SNOMEDCT:62479008][accessDate: 04-11-2010]
Acquired immunodeficiency syndrome is a HIV infection consisting of a disease of the human immune system that is characterized cytologically especially by a reduction in the numbers of CD4-bearing helper T cells to 20 percent or less of normal thereby rendering the subject highly vulnerable to life-threatening conditions (as Pneumocystis carinii pneumonia) and to some that become life threatening (as Kaposi's sarcoma) and that is caused by infection with HIV commonly transmitted in infected blood especially during illicit intravenous drug use and in bodily secretions (as semen) during sexual intercourse.
GeneRIF:14557639
Acquired immune deficiency syndrome, NOS[accessedResource: SNOMEDCT:62479008][accessDate: 04-11-2010]
GeneRIF:16014568
GeneRIF:12468426
GeneRIF:11121048
Acquired Immune Deficiency[accessedResource: NCIt:C2851][accessDate: 04-11-2010]
GeneRIF:15377788
Acquired immune deficiency syndrome, NOS
GeneRIF:12114533
Acquired immune defic. syndr.
GeneRIF:15042330
AIDS, NOS[accessedResource: SNOMEDCT:62479008][accessDate: 04-11-2010]
ACQUIRED IMMUNE DEFIC SYNDROME[accessedResource: MSH:D000163][accessDate: 04-11-2010]
GeneRIF:12944981
Syndrome, Acquired Immuno-Deficiency[accessedResource: MSH:D000163][accessDate: 04-11-2010]
Acquired human immunodeficiency virus infection syndrome NOS[accessedResource: SNOMEDCT:186715004][accessDate: 04-11-2010]
Immuno-Deficiency Syndromes, Acquired
Immunodeficiency Syndrome, Acquired
Immuno-Deficiency Syndromes, Acquired[accessedResource: MSH:D000163][accessDate: 04-11-2010]
GeneRIF:12501250
GeneRIF:15327898
Acquired immunodeficiency syndrome, NOS[accessedResource: SNOMEDCT:62479008][accessDate: 04-11-2010]
Acquired immune deficiency syndrome (AIDS)[accessedResource: SNOMEDCT:62479008][accessDate: 04-11-2010]
James Malone
embryonic central brain surface glia
FBbt:00005664
Ele Holloway
James Malone
NCI-H747
James Malone
larval day 6
ZFS:0000038
DSSTox_CID:39657
CASRN:21679-14-1
James Malone
STRUCTURE_Formula:9-beta-D-arabinofuranosyl-2-fluoro-9H-purin-6-amine
Tomasz Adamusiak
Ele Holloway
DSSTox_Generic_SID:C10H12FN5O4
fludarabine
CHEBI:26155
James Malone
http://www.ebi.ac.uk/efo/EFO_0001900
A chemical, natural or artificial, that can affect the rate of growth of a plant.
plant growth regulator
plant growth regulators
James Malone
superior temporal gyrus
FMA:61905
NCIt:C0152309
James Malone
BALB is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/001026.html
BALB/cByJ
http://jaxmice.jax.org/strain/001026.html
James Malone
cervix epithelium
MA:0001724
NCIt:C49218
James Malone
Tomasz Adamusiak
MO_562
cell line
true
Atwood et al (2000) OED of Biochemistry and Molecular Biology, Oxford University Press.
Jie Zheng
A cell line is a cell factor which describes a population of cells cultured in vitro that are descended through one or more generations (and possible sub-cultures) from a single primary culture which was originally derived from part of an organism. The cells of such a population share common characteristics.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_line
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cell_line[accessedResource: MO_562][accessDate: 04-11-2010]
Dorsal imaginal disc of the metathorax. Precursor of structure of the adult dorsal metathorax including the haltere.
FBbt:00001779
dorsal metathoracic disc
haltere disc
haltere disc[accessedResource: FBbt:00001779][accessDate: 04-11-2010]
Dorsal imaginal disc of the metathorax. Precursor of structure of the adult dorsal metathorax including the haltere.[accessedResource: FBbt:00001779][accessDate: 04-11-2010]
James Malone
InChI=1/C2H3NO3/c3-1(4)2(5)6/h(H2,3,4)(H,5,6)/f/h5H,3H2
amino(oxo)acetic acid
http://www.ebi.ac.uk/efo/EFO_0001588
A dicarboxylic acid amide that has formula C2H3NO3.
InChIKey=SOWBFZRMHSNYGE-YPUDGCQOCP
C2H3NO3
oxamic acid
Oxamate
The monoamide of oxalic acid.
CHEBI:18058
Oxalic monoamide
NC(=O)C(O)=O
Jie Zheng
Tomasz Adamusiak
pancreatic endoderm
COCM - Congestive cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
COCM - Congestive cardiomyopathy
Cardiomyopathies, Dilated
Dilated cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
DCM - Dilated cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
Cardiomyopathy, Dilated, LMNA
Cardiomyopathy, Familial Idiopathic[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Congestive dilated cardiomyopathy
true
Cardiomyopathy, Dilated, with Conduction Deffect1
Idiopathic Cardiomyopathies, Familial[accessedResource: MSH:D002311][accessDate: 10-05-2010]
DCM - Dilated cardiomyopathy
Cardiomyopathy, Dilated, with Conduction Deffect1[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Cardiomyopathy, Dilated, CMD1A
Cardiomyopathy, Congestive[accessedResource: MSH:D002311][accessDate: 10-05-2010]
MSH:D002311
DOID:12930
Primary dilated cardiomyopathy[accessedResource: SNOMEDCT:195021004][accessDate: 10-05-2010]
Cardiomyopathy, Dilated, CMD1A[accessedResource: MSH:D002311][accessDate: 10-05-2010]
CCM - Congestive cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
A form of CARDIAC MUSCLE disease that is characterized by ventricular dilation, VENTRICULAR DYSFUNCTION, and HEART FAILURE. Risk factors include SMOKING; ALCOHOL DRINKING; HYPERTENSION; INFECTION; PREGNANCY; and mutations in the LMNA gene encoding LAMIN TYPE A, a NUCLEAR LAMINA protein.[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Cardiomyopathy, Congestive
primary dilated cardiomyopathy (disorder)[accessedResource: DOID:12930][accessDate: 10-05-2010]
Familial Idiopathic Cardiomyopathies
1.7
A form of CARDIAC MUSCLE disease that is characterized by ventricular dilation, VENTRICULAR DYSFUNCTION, and HEART FAILURE. Risk factors include SMOKING; ALCOHOL DRINKING; HYPERTENSION; INFECTION; PREGNANCY; and mutations in the LMNA gene encoding LAMIN TYPE A, a NUCLEAR LAMINA protein.
Congestive cardiomyopathy (disorder)[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
SNOMEDCT:195021004
Congestive dilated cardiomyopathy[accessedResource: SNOMEDCT:399020009][accessDate: 10-05-2010]
SNOMEDCT:399020009
CCM - Congestive cardiomyopathy
Primary dilated cardiomyopathy (disorder)
Cardiomyopathy, Dilated
Cardiomyopathies, Dilated[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Cardiomyopathies, Congestive[accessedResource: MSH:D002311][accessDate: 10-05-2010]
Familial Idiopathic Cardiomyopathy
Tomasz Adamusiak
Congestive Cardiomyopathies
Cardiomyopathy, Dilated, LMNA[accessedResource: MSH:D002311][accessDate: 10-05-2010]
James Malone
Primary dilated cardiomyopathy
obsolete_congestive cardiomyopathy
Congestive cardiomyopathy (disorder)
Same as dilated cardiomyopathy EFO_0000407
MA:0000016
FMAID:7157
ZFA:0000396
nervous system
AAO:0000324
SAEL:71
The nervous system is essentially a biological information highway, and is responsible for controlling all the biological processes and movement in the body, and can also receive information and interpret it via electrical signals which are used in this nervous system. It consists of the Central Nervous System (CNS), essentially the processing area and the Peripheral Nervous System which detects and sends electrical impulses that are used in the nervous system.
BTO:0001484
A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS).[accessedResource: ZFA:0000396][accessDate: 04-11-2010]
A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS).
NIFSTD:birnlex_844
FBbt:00005093
All the nerve centers and nerve fibers in the central, visceral and peripheral nervous systems.
A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS). (Source: BioGlossary, www.Biology-Text.com)
XAO:0000177
EHDAA:826
James Malone
TAO:0000396
A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS). (Source: BioGlossary, www.Biology-Text.com)[accessedResource: TAO:0000396][accessDate: 04-11-2010]
Tomasz Adamusiak
WBbt:0005735
The nervous system is essentially a biological information highway, and is responsible for controlling all the biological processes and movement in the body, and can also receive information and interpret it via electrical signals which are used in this nervous system. It consists of the Central Nervous System (CNS), essentially the processing area and the Peripheral Nervous System which detects and sends electrical impulses that are used in the nervous system.[accessedResource: BTO:0001484][accessDate: 04-11-2010]
EMAPA:16469
EV:0100162
All the nerve centers and nerve fibers in the central, visceral and peripheral nervous systems.[accessedResource: FBbt:00005093][accessDate: 04-11-2010]
MAT:0000026
corm
MAT:0000368
James Malone
A rounded thick modified underground stem base bearing membranous or scaly leaves and buds and acting as a vegetative reproductive structure.[accessedResource: BTO:0000285][accessDate: 04-11-2010]
A rounded thick modified underground stem base bearing membranous or scaly leaves and buds and acting as a vegetative reproductive structure.
BTO:0000285
GRO:0005787
GRO:0005787[accessedResource: BTO:0000285][accessDate: 04-11-2010]
synonym with material entity
true
obsolete_sample factor
Secondary olfactory cortical area (Carpenter)[accessedResource: FMA:72356][accessDate: 04-11-2010]
Entorhinal area[accessedResource: FMA:72356][accessDate: 04-11-2010]
entorhinal cortex
FMA:72356
Area 28 of Brodmann (Crosby)
James Malone
Secondary olfactory cortical area (Carpenter)
Entorhinal area
Area 28 of Brodmann (Crosby)[accessedResource: FMA:72356][accessDate: 04-11-2010]
Secondary olfactory cortex
Secondary olfactory cortex[accessedResource: FMA:72356][accessDate: 04-11-2010]
Ele Holloway
James Malone
BCBL-1
Natural Language Generator 8th April 2010
A BM1604 is a cell line.
A BM1604 is all of the following: something that is bearer of a prostate carcinoma, something that derives from a homo sapiens, and something that derives from a prostate.
James Malone
BM1604
Ele Holloway
Denotes the inhabitants of Ireland, a person from there, or their descendants elsewhere.[accessedResource: NCIt:C43856][accessDate: 04-11-2010]
Tomasz Adamusiak
Denotes the inhabitants of Ireland, a person from there, or their descendants elsewhere.
Irish
NCIt:C43856
James Malone
CS57811 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158835&type=germplasm
CS57811
http://www.arabidopsis.org/servlets/TairObject?id=1005158835&type=germplasm
Tomasz Adamusiak
ILSXISS92/TejJ
http://jaxmice.jax.org/strain/009283.html
CV system[accessedResource: FMAID:7161][accessDate: 04-11-2010]
EMAPA:16104
CV system
circulatory system
XAO:0000100
FBbt:00005057
The system of heart and blood vessels.
cardiovascular system
FMAID:7161
TADS:0000146
The system of heart and blood vessels.[accessedResource: BTO:0000088][accessDate: 04-11-2010]
circulatory system[accessedResource: FBbt:00005057][accessDate: 04-11-2010]
SAEL:16
James Malone
ZFA:0000010
MAT:0000016
MA:0000010
TAO:0000010
EV:0100017
Organ system which consists of the heart, the systemic and pulmonary arterial and venous system, the lymphatic and the portal venous system.
BTO:0000088
EHDAA:394
MFO:000290
CASRN:112726-66-6
BTCP maleate
STRUCTURE_Formula:C19H25NS
Ele Holloway
DSSTox_CID:22581
DSSTox_Generic_SID:42581
STRUCTURE_ChemicalName_IUPAC:1-[1-(1-benzothiophen-2-yl)cyclohexyl]piperidine
1-[1-(2-Benzo[b]thienyl)cyclohexyl)]piperidine maleate
James Malone
Tomasz Adamusiak
James Malone
http://www.ebi.ac.uk/efo/EFO_0001673
insulin
CHEBI:5931
nafadotride
DSSTox_Generic_SID:42603
Ele Holloway
CASRN:149649-22-9
STRUCTURE_Formula:C22H27N3O2
Tomasz Adamusiak
DSSTox_CID:22603
STRUCTURE_ChemicalName_IUPAC:N-[(1-butylpyrrolidin-2-yl)methyl]-4-cyano-1-methoxynaphthalene-2-carboxamide
James Malone
Huntington's disease pathway[accessedResource: DOID:12858][accessDate: 04-11-2010]
HD - Huntington chorea[accessedResource: SNOMEDCT:58756001][accessDate: 04-11-2010]
GeneRIF:12706247
GeneRIF:15934928
Juvenile Huntington Disease
Huntington Disease[accessedResource: MSH:D006816][accessDate: 04-11-2010]
GeneRIF:15845076
NIFSTD:birnlex_12500
GeneRIF:11914418
Chronic progressive chorea[accessedResource: SNOMEDCT:58756001][accessDate: 04-11-2010]
GeneRIF:11813242
Huntington Disease, Juvenile Onset[accessedResource: MSH:D006816][accessDate: 04-11-2010]
GeneRIF:15843398
GeneRIF:16054230
GeneRIF:12952868
GeneRIF:12614934
Chronic progressive chorea
GeneRIF:12604778
GeneRIF:15742215
GeneRIF:14725621
DOID:12858
HUNTINGTON DIS[accessedResource: MSH:D006816][accessDate: 04-11-2010]
Chorea, Huntington[accessedResource: MSH:D006816][accessDate: 04-11-2010]
GeneRIF:12736330
GeneRIF:11593450
GeneRIF:12969257
GeneRIF:11432963
HUNTINGTONS DIS
GeneRIF:15009635
HUNTINGTON DIS
Juvenile-Onset Huntington Disease
HD
Chorea, Huntington
HUNTINGTONS DIS[accessedResource: MSH:D006816][accessDate: 04-11-2010]
Late Onset Huntington Disease[accessedResource: MSH:D006816][accessDate: 04-11-2010]
GeneRIF:15817265
Huntington's[accessedResource: NIFSTD:birnlex_12500][accessDate: 04-11-2010]
Huntington's disease
GeneRIF:15715085
GeneRIF:12657678
SNOMEDCT:58756001
GeneRIF:12682342
A familial disorder inherited as an autosomal dominant trait and characterized by the onset of progressive CHOREA and DEMENTIA in the fourth or fifth decade of life. Common initial manifestations include paranoia; poor impulse control; DEPRESSION; HALLUCINATIONS; and DELUSIONS. Eventually intellectual impairment; loss of fine motor control; ATHETOSIS; and diffuse chorea involving axial and limb musculature develops, leading to a vegetative state within 10-15 years of disease onset. The juvenile variant has a more fulminant course including SEIZURES; ATAXIA; dementia; and chorea. (From Adams et al., Principles of Neurology, 6th ed, pp1060-4)[accessedResource: MSH:D006816][accessDate: 04-11-2010]
GeneRIF:15167689
HC - Huntington chorea
Huntington Disease, Akinetic-Rigid Variant
GeneRIF:12950446
A familial disorder inherited as an autosomal dominant trait and characterized by the onset of progressive CHOREA and DEMENTIA in the fourth or fifth decade of life. Common initial manifestations include paranoia; poor impulse control; DEPRESSION; HALLUCINATIONS; and DELUSIONS. Eventually intellectual impairment; loss of fine motor control; ATHETOSIS; and diffuse chorea involving axial and limb musculature develops, leading to a vegetative state within 10-15 years of disease onset. The juvenile variant has a more fulminant course including SEIZURES; ATAXIA; dementia; and chorea.[accessedResource: NIFSTD:birnlex_12500][accessDate: 04-11-2010]
GeneRIF:12915485
Huntington Disease, Late Onset
ICD9:333.4
Huntington's
GeneRIF:15922606
GeneRIF:15261377
GeneRIF:16184606
GeneRIF:15496672
AKINETIC RIGID VARIANT HUNTINGTON DIS[accessedResource: MSH:D006816][accessDate: 04-11-2010]
Chronic progressive hereditary chorea[accessedResource: SNOMEDCT:58756001][accessDate: 04-11-2010]
GeneRIF:15057517
Akinetic Rigid Variant of Huntington Disease[accessedResource: MSH:D006816][accessDate: 04-11-2010]
GeneRIF:12078510
GeneRIF:15029481
HD - Huntington chorea
Huntington's chorea (disorder)[accessedResource: DOID:12858][accessDate: 04-11-2010]
GeneRIF:12960759
JUVENILE ONSET HUNTINGTON DIS[accessedResource: MSH:D006816][accessDate: 04-11-2010]
HUNTINGTON DIS LATE ONSET
HUNTINGTON'S CHOREA[accessedResource: ICD9:333.4][accessDate: 04-11-2010]
Huntington's disease pathway
GeneRIF:11817536
Chronic progressive hereditary chorea
GeneRIF:14985389
GeneRIF:14981075
GeneRIF:16115812
HD[accessedResource: DOID:12858][accessDate: 04-11-2010]
GeneRIF:15359012
GeneRIF:15033177
GeneRIF:14511117
HUNTINGTON DIS JUVENILE[accessedResource: MSH:D006816][accessDate: 04-11-2010]
James Malone
A familial disorder inherited as an autosomal dominant trait and characterized by the onset of progressive CHOREA and DEMENTIA in the fourth or fifth decade of life. Common initial manifestations include paranoia; poor impulse control; DEPRESSION; HALLUCINATIONS; and DELUSIONS. Eventually intellectual impairment; loss of fine motor control; ATHETOSIS; and diffuse chorea involving axial and limb musculature develops, leading to a vegetative state within 10-15 years of disease onset. The juvenile variant has a more fulminant course including SEIZURES; ATAXIA; dementia; and chorea.
A familial disorder inherited as an autosomal dominant trait and characterized by the onset of progressive CHOREA and DEMENTIA in the fourth or fifth decade of life. Common initial manifestations include paranoia; poor impulse control; DEPRESSION; HALLUCINATIONS; and DELUSIONS. Eventually intellectual impairment; loss of fine motor control; ATHETOSIS; and diffuse chorea involving axial and limb musculature develops, leading to a vegetative state within 10-15 years of disease onset. The juvenile variant has a more fulminant course including SEIZURES; ATAXIA; dementia; and chorea. (From Adams et al., Principles of Neurology, 6th ed, pp1060-4)
Chorea, Chronic Progressive Hereditary (Huntington)
GeneRIF:14978262
AKINETIC RIGID VARIANT HUNTINGTON DIS
Huntington disease
GeneRIF:15644269
GeneRIF:12691731
GeneRIF:15749339
GeneRIF:14522959
GeneRIF:15878807
GeneRIF:15337316
Juvenile Huntington Disease[accessedResource: MSH:D006816][accessDate: 04-11-2010]
Progressive Chorea, Hereditary, Chronic (Huntington)[accessedResource: MSH:D006816][accessDate: 04-11-2010]
GeneRIF:12781994
HUNTINGTON DIS JUVENILE ONSET
Akinetic Rigid Variant of Huntington Disease
GeneRIF:12008025
GeneRIF:12890790
Tomasz Adamusiak
MSH:D006816
Chorea, Huntington's
Huntington's chorea (disorder)
HC - Huntington chorea[accessedResource: SNOMEDCT:58756001][accessDate: 04-11-2010]
GeneRIF:14751289
GeneRIF:15880743
GeneRIF:12531510
GeneRIF:15383276
HUNTINGTON DIS LATE ONSET[accessedResource: MSH:D006816][accessDate: 04-11-2010]
Huntington Disease, Akinetic Rigid Variant[accessedResource: MSH:D006816][accessDate: 04-11-2010]
GeneRIF:15476444
GeneRIF:12528814
HUNTINGTON DIS JUVENILE
James Malone
hemangiopericytoma[accessedResource: DOID:2414][accessDate: 04-11-2010]
NCIt:C27263
A sarcoma that is composed of spindle cells with a rich vascular network.
spindle cell tumor
DOID:2414
A sarcoma that is composed of spindle cells with a rich vascular network.[accessedResource: DOID:2414][accessDate: 04-11-2010]
Spindle Cell Neoplasm[accessedResource: NCIt:C27263][accessDate: 04-11-2010]
Spindle Cell Neoplasm
hemangiopericytoma
Alveolar rhabdomyosarcoma (morphologic abnormality)
A form of RHABDOMYOSARCOMA occurring mainly in adolescents and young adults, affecting muscles of the extremities, trunk, orbital region, etc. It is extremely malignant, metastasizing widely at an early stage. Few cures have been achieved and the prognosis is poor. "Alveolar" refers to its microscopic appearance simulating the cells of the respiratory alveolus. (Holland et al., Cancer Medicine, 3d ed, p2188)[accessedResource: MSH:D018232][accessDate: 04-11-2010]
Alveolar rhabdomyosarcoma (disorder)
DOID:4051
A rapidly growing malignant mesenchymal neoplasm. It is characterized by the presence of round cells with myoblastic differentiation and a fibrovascular stroma resembling an alveolar growth pattern. The tumor usually presents in the extremities.[accessedResource: NCIt:C3749][accessDate: 04-11-2010]
SNOMEDCT:404053004
alveolar rhabdomyosarcoma
SNOMEDCT:63449009
A rapidly growing malignant mesenchymal neoplasm. It is characterized by the presence of round cells with myoblastic differentiation and a fibrovascular stroma resembling an alveolar growth pattern. The tumor usually presents in the extremities.
Alveolar
GeneRIF:11846302
NCIt:C3749
GeneRIF:16157701
Rhabdomyosarcomas, Alveolar[accessedResource: MSH:D018232][accessDate: 04-11-2010]
MSH:D018232
GeneRIF:15140004
Alveolar rhabdomyosarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:63449009][accessDate: 04-11-2010]
GeneRIF:12039929
Rhabdomyosarcomas, Alveolar
Alveolar rhabdomyosarcoma (disorder)[accessedResource: DOID:4051][accessDate: 04-11-2010]
James Malone
myeloid lineage restricted progenitor cell
A progenitor cell restricted to the myeloid lineage.[accessedResource: CL:0000839][accessDate: 04-11-2010]
CL:0000839
A progenitor cell of any myeloid lineage, potentially multipotent.
myeloid lineage restricted progenitor cell[accessedResource: CL:0000839][accessDate: 04-11-2010]
A progenitor cell restricted to the myeloid lineage.
Tomasz Adamusiak
myeloid progenitor cell
TGMA:0000007
adult antenna
One of the paired anterior appendicular organs of the insect head.[accessedResource: TGMA:0000007][accessDate: 04-11-2010]
One of a pair of slender movable segmented sensory organs on the head of insects, myriapods, and crustaceans.[accessedResource: BTO:0000074][accessDate: 04-11-2010]
Paired, segmented, jointed, sensory appendage attached to the anterior of the head capsule, between the eyes.
FBbt:00004511
Paired, segmented, jointed, sensory appendage attached to the anterior of the head capsule, between the eyes.[accessedResource: FBbt:00004511][accessDate: 04-11-2010]
feeler
One of the paired anterior appendicular organs of the insect head.
antenna
James Malone
One of a pair of slender movable segmented sensory organs on the head of insects, myriapods, and crustaceans.
MAT:0000086
feeler[accessedResource: TGMA:0000007][accessDate: 04-11-2010]
adult antenna[accessedResource: TGMA:0000007][accessDate: 04-11-2010]
BTO:0000074
Ele Holloway
James Malone
ITM
Amelanotic Malignant Melanoma of the Skin
Amelanotic Malignant Melanoma of Skin[accessedResource: NCIt:C4633][accessDate: 04-11-2010]
Amelanotic Melanoma of the Skin
Amelanotic Malignant Melanoma (of Skin)
Amelanotic Malignant Skin Melanoma[accessedResource: NCIt:C4633][accessDate: 04-11-2010]
Amelanotic Melanoma of Skin
Amelanotic Melanoma of Skin[accessedResource: NCIt:C4633][accessDate: 04-11-2010]
NCIt:C4633
Amelanotic Malignant Skin Melanoma
Amelanotic Melanoma of the Skin[accessedResource: NCIt:C4633][accessDate: 04-11-2010]
Amelanotic Malignant Melanoma of the Skin[accessedResource: NCIt:C4633][accessDate: 04-11-2010]
amelanotic skin melanoma
MPNST with glandular differentiation[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Malignant Peripheral Nerve Sheath Tumour
Neurosarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
NCIt:C3798
MPNST - Malignant peripheral nerve sheath tumour
Malignant peripheral nerve sheath tumour[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
malignant neoplasm of the peripheral nerve Sheath[accessedResource: DOID:5940][accessDate: 10-05-2010]
MPNST - Malignant peripheral nerve sheath tumor
Nerve Sheath Neoplasms
Tumors of the Nerve Sheath[accessedResource: MSH:D018317][accessDate: 10-05-2010]
MPNSTs
Neurosarcoma[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
GeneRIF:12917360
Nerve Sheath Neoplasm[accessedResource: MSH:D018317][accessDate: 10-05-2010]
GeneRIF:12782393
malignant peripheral nerve sheath tumor (morphologic abnormality)[accessedResource: DOID:5940][accessDate: 10-05-2010]
Malignant Neurilemmoma
malignant peripheral nerve sheath tumor [dup] (morphologic abnormality)[accessedResource: DOID:5940][accessDate: 10-05-2010]
Perineuriomas[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Malignant Tumor of Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
Epithelioid MPNST
Neurogenic sarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Malignant Neurilemoma
Nerve Sheath Neoplasm
Malignant Neurilemoma[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
GeneRIF:12152785
Tumors of the Nerve Sheath
GeneRIF:12660952
Neoplasms which arise from nerve sheaths formed by SCHWANN CELLS in the PERIPHERAL NERVOUS SYSTEM or by OLIGODENDROCYTES in the CENTRAL NERVOUS SYSTEM. Malignant peripheral nerve sheath tumors, NEUROFIBROMA, and NEURILEMMOMA are relatively common tumors in this category.
An uncommon, highly aggressive malignant tumor, arising from the peripheral nerves and affecting mostly adults in their third to sixth decades of life. It usually occurs in medium-sized and large nerves of the buttock, thigh, upper arm, or the paraspinal region. It may be associated with neurofibromatosis 1 (NF1).
SNOMEDCT:19897006
An uncommon, highly aggressive malignant tumor, arising from the peripheral nerves and affecting mostly adults in their third to sixth decades of life. It usually occurs in medium-sized and large nerves of the buttock, thigh, upper arm, or the paraspinal region. It may be associated with neurofibromatosis 1 (NF1).[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
MPNST - Malignant peripheral nerve sheath tumor[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Perineurioma
MSH:D018317
Melanotic MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Malignant Peripheral Nerve Sheath Tumor
Peripheral Nerve Sheath Tumors[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Peripheral Nerve Sheath Tumors, Malignant
Nerve Sheath Neoplasms[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Neurofibrosarcoma
Malignant Peripheral Nerve Sheath Neoplasm
GeneRIF:11642720
Perineurioma[accessedResource: MSH:D018317][accessDate: 10-05-2010]
NEOPL NERVE SHEATH[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Neurosarcoma [obs]
Malignant peripheral nerve sheath tumor (disorder)
Nerve Sheath Tumors
Malignant Schwannoma[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
obsolete_malignant peripheral nerve sheath tumor class
Melanotic psammomatous MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Melanotic psammomatous MPNST
Neurogenic sarcoma
malignant neoplasm of the peripheral nerve Sheath
Malignant Neoplasm of Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
Malignant Peripheral Nerve Sheath Neoplasm[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
Peripheral Nerve Sheath Tumors
malignant peripheral nerve sheath tumor [dup] (morphologic abnormality)
Neoplasms which arise from nerve sheaths formed by SCHWANN CELLS in the PERIPHERAL NERVOUS SYSTEM or by OLIGODENDROCYTES in the CENTRAL NERVOUS SYSTEM. Malignant peripheral nerve sheath tumors, NEUROFIBROMA, and NEURILEMMOMA are relatively common tumors in this category.[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Neurofibrosarcoma [obs]
MPNSTs[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Malignant Neurilemmoma[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
true
MPNST
Neurofibrosarcoma[accessedResource: SNOMEDCT:404037002][accessDate: 10-05-2010]
malignant peripheral nerve sheath tumor (disorder)[accessedResource: DOID:5940][accessDate: 10-05-2010]
SNOMEDCT:404037002
Peripheral Nerve Sheath Tumors, Malignant[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Perineuriomas
Malignant Tumor of the Peripheral Nerve Sheath
GeneRIF:12730955
Malignant Tumor of Peripheral Nerve Sheath
GeneRIF:14991838
Malignant Tumor of the Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
MPNST - Malignant peripheral nerve sheath tumour[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
GeneRIF:14519636
Malignant Neoplasm of Peripheral Nerve Sheath
Neurofibrosarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Neurosarcoma
MPNST with glandular differentiation
Nerve Sheath Tumors[accessedResource: MSH:D018317][accessDate: 10-05-2010]
NEOPL NERVE SHEATH
Melanotic MPNST
MPNST with mesenchymal differentiation
Neurogenic sarcoma [obs]
Malignant peripheral nerve sheath tumor (morphologic abnormality)
MPNST with mesenchymal differentiation[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
DOID:5940
Epithelioid MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
Malignant schwannoma
Neurogenic sarcoma[accessedResource: SNOMEDCT:19897006][accessDate: 10-05-2010]
MPNST[accessedResource: MSH:D018317][accessDate: 10-05-2010]
Malignant Peripheral Nerve Sheath Tumor[accessedResource: NCIt:C3798][accessDate: 10-05-2010]
A respiratory infection caused by BORDETELLA PERTUSSIS and characterized by paroxysmal coughing ending in a prolonged crowing intake of breath.
Whooping cough NOS (disorder)
A respiratory infection caused by BORDETELLA PERTUSSIS and characterized by paroxysmal coughing ending in a prolonged crowing intake of breath.[accessedResource: MSH:D014917][accessDate: 04-11-2010]
Whooping cough due to unspecified organism
Pertussis[accessedResource: MSH:D014917][accessDate: 04-11-2010]
Pertusses[accessedResource: MSH:D014917][accessDate: 04-11-2010]
Infection due to Bordetella pertussis[accessedResource: SNOMEDCT:27836007][accessDate: 04-11-2010]
BORDETELLA PERTUSSIS[accessedResource: ICD9:033.0][accessDate: 04-11-2010]
Pertusses
BORDETELLA PERTUSSIS
bordetella infection[accessedResource: DOID:1116][accessDate: 04-11-2010]
bordetella infection
GeneRIF:12946329
Whooping cough, unspecified organism
SNOMEDCT:27836007
GeneRIF:16239529
Pertussis (disorder)
GeneRIF:15341649
GeneRIF:12220988
A respiratory system infectious disease that is caused by bacteria of the genus Bordetella characterized by a prolonged, high-pitched, deeply indrawn breath (whoop). The bacterium Bordetella pertussis causes a highly contagious form of whooping cough, and a milder disease is caused by Bordetella parapertussis.
Whooping cough due to bordetella pertussis [B. pertussis][accessedResource: ICD9:033.0][accessDate: 04-11-2010]
WC - Whooping cough[accessedResource: SNOMEDCT:27836007][accessDate: 04-11-2010]
Infection due to Bordetella pertussis
Whooping cough, NOS[accessedResource: SNOMEDCT:27836007][accessDate: 04-11-2010]
Whooping cough, NOS
Whooping cough NOS (disorder)[accessedResource: DOID:1116][accessDate: 04-11-2010]
whooping cough
Whooping cough due to unspecified organism[accessedResource: DOID:1116][accessDate: 04-11-2010]
Whooping cough, unspecified organism[accessedResource: DOID:1116][accessDate: 04-11-2010]
(Whooping cough) or (Bordetella)
pertussis
GeneRIF:12464013
Whooping cough, unspecified (disorder)[accessedResource: DOID:1116][accessDate: 04-11-2010]
GeneRIF:15845471
WC - Whooping cough
(Whooping cough) or (Bordetella)[accessedResource: DOID:1116][accessDate: 04-11-2010]
MSH:D014917
DOID:1116
Pertussis (disorder)[accessedResource: DOID:1116][accessDate: 04-11-2010]
A respiratory system infectious disease that is caused by bacteria of the genus Bordetella characterized by a prolonged, high-pitched, deeply indrawn breath (whoop). The bacterium Bordetella pertussis causes a highly contagious form of whooping cough, and a milder disease is caused by Bordetella parapertussis.[accessedResource: DOID:1116][accessDate: 04-11-2010]
GeneRIF:15716435
Pertussis
Whooping cough, unspecified (disorder)
Whooping cough due to B. pertussis
James Malone
ICD9:033.0
Whooping cough due to bordetella pertussis [B. pertussis]
Ele Holloway
James Malone
Tomasz Adamusiak
demecolcine
CASRN:477-30-5
N-deacetyl-N-methylcolchicine
1.8
true
obsolete_pulmonary arterial hypertension
NCIt:C3120
Pulmonary Hypertension
Increased pressure within the pulmonary circulation due to lung or heart disorder.[accessedResource: NCIt:C3120][accessDate: 10-05-2010]
duplicate of pulmonary hypertension EFO_0001361
Increased pressure within the pulmonary circulation due to lung or heart disorder.
James Malone
James Malone
An assay in which the methylation state is determined and is compared between samples.
methylation profiling
ArrayExpress production team
James Malone
Tomasz Adamusiak
neoplasm of mature T-cells or NK-cells
peripheral T-cell or NK-cell neoplasm
Ele Holloway
James Malone
COLO-829
COLO829
Jie Zheng
Tomasz Adamusiak
aggressive
NCIt:C14138
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
Bursa-Dependent Lymphocytes
Bursa-Equivalent Lymphocyte
B-Lymphocytes[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.[accessedResource: CL:0000236][accessDate: 10-05-2010]
B cell[accessedResource: CL:0000236][accessDate: 10-05-2010]
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.
obsolete_B lymphocyte
B-Cell
B Cells
B lymphocyte
B Lymphocytes
true
B Cells[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
CL:0000236
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.
Bursa-Dependent Lymphocytes[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
Consolidated with B cell (EFO_0000101), use B cell class instead.
B lymphocyte[accessedResource: CL:0000236][accessDate: 10-05-2010]
Bursa-Equivalent Lymphocyte[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
NCIt:C12474
A GM19238 is a cell line.
A GM19238 is all of the following: something that has as quality a female, something that derives from a Homo sapiens, and something that derives from a b cell.
James Malone
GM19238
Natural Language Generator 8th April 2010
cadmium dichloride
10108-64-2
20226
226
CdCl2
cadmium dichloride
cadmium chloride
James Malone
CS57691 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158715&type=germplasm
CS57691
http://www.arabidopsis.org/servlets/TairObject?id=1005158715&type=germplasm
James Malone
CS57620 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158644&type=germplasm
CS57620
http://www.arabidopsis.org/servlets/TairObject?id=1005158644&type=germplasm
ENBREL
etanercept
tracheal tubule
BTO:0001388
Cuticle-lined epithelial tube that forms part of the tracheal system. The thinnest trachea consist of a single tracheocyte folded back on itself to form a tube.
EHDAA:3078
MAT:0000137
FBbt:00005043
Cuticle-lined epithelial tube that forms part of the tracheal system. The thinnest trachea consist of a single tracheocyte folded back on itself to form a tube.[accessedResource: FBbt:00005043][accessDate: 04-11-2010]
trachea
tracheal tubule[accessedResource: BTO:0001388][accessDate: 04-11-2010]
1: The cartilaginous and membranous tube descending from the larynx and branching into the right and left main bronchi. It is kept patent by a series of about twenty transverse horseshoe-shaped cartilages. Called also windpipe. n2: One of a system of minute tubes ramifying throughout the body of a terrestrial arthropod and delivering air to the tissues. Called also tracheal tubule.
XAO:0000118
TADS:000315
windpipe
MA:0000441
Windpipe[accessedResource: FMAID:7394][accessDate: 04-11-2010]
FMAID:7394
1: The cartilaginous and membranous tube descending from the larynx and branching into the right and left main bronchi. It is kept patent by a series of about twenty transverse horseshoe-shaped cartilages. Called also windpipe. n2: One of a system of minute tubes ramifying throughout the body of a terrestrial arthropod and delivering air to the tissues. Called also tracheal tubule.[accessedResource: BTO:0001388][accessDate: 04-11-2010]
EMAPA:16853
James Malone
EV:0100040
SAEL:111
A time unit which is equal to the duration of 9 192 631 770 periods of the radiation corresponding to the transition between the two hyperfine levels of the ground state of the caesium 133 atom.
second
A second is a time unit which is equal to the duration of 9 192 631 770 periods of the radiation corresponding to the transition between the two hyperfine levels of the ground state of the caesium 133 atom.
s
UO:0000010
http://www.ebi.ac.uk/efo/EFO_0001687
true
James Malone
Occipital lobe is the one of five lobes of the cerebral hemisphere which occupies the posterior-most portion of the hemisphere. Anteriorly, it shares an arbitrary border with the parietal lobe and temporal lobe. Medially, it is bounded by the longitudinal cerebral fissure.
occipital cortex[accessedResource: BTO:0000293][accessDate: 04-11-2010]
Occipital region[accessedResource: FMAID:67325][accessDate: 04-11-2010]
occipital lobe
This lobe is located at the back of the head and is involved in vision and reading.[accessedResource: BTO:0000293][accessDate: 04-11-2010]
BTO:0000293
This lobe is located at the back of the head and is involved in vision and reading.
James Malone
FMAID:67325
Occipital cortex
MAT:0000507
EV:0100170
Occipital region
One of two or three twisted, curved tubules in each lobule of the testis in which spermatozoa develop.
Seminiferous Tubule
One of two or three twisted, curved tubules in each lobule of the testis in which spermatozoa develop.[accessedResource: BTO:0001235][accessDate: 04-11-2010]
Seminiferous Tubule[accessedResource: NCIt:C13047][accessDate: 04-11-2010]
NCIt:C13047
James Malone
BTO:0001235
seminiferous tubules
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#operator_variation_design[accessedResource: MO_519][accessDate: 04-11-2010]
Tomasz Adamusiak
operator variation design
MO_519
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#operator_variation_design
A shoot component is a plant component which is specifically part of a plant shoot.
shoot component
Ele Holloway
James Malone
R11
A cancer cell line is defined as something that is bearer of a cancer.
A cancer cell line is a cell line.
James Malone
Natural Language Generator 8th April 2010
cancer cell line
glyphosate
1071-83-6
24122
4122
C3H8NO5P
[(phosphonomethyl)amino]acetic acid
James Malone
CS57581 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158605&type=germplasm
CS57581
http://www.arabidopsis.org/servlets/TairObject?id=1005158605&type=germplasm
C57Bl/10 derived nonobese diabetic (NOD) mouse strain.
NOD.B10
Jie Zheng
Tomasz Adamusiak
https://www.cbil.upenn.edu/RADQuerier/php/displayStudy.php?study_id=2424
The epidermal complex consisting of two guard cells and the pore between them.
PO:0002000
stomatal complex
stoma
BTO:0000052
James Malone
stoma[accessedResource: BTO:0000052][accessDate: 04-11-2010]
GRO:0005350[accessedResource: BTO:0000052][accessDate: 04-11-2010]
MAT:0000346
The epidermal complex consisting of two guard cells and the pore between them.[accessedResource: BTO:0000052][accessDate: 04-11-2010]
GRO:0005350
CHEBI:37848
James Malone
http://www.ebi.ac.uk/efo/EFO_0001861
plant growth hormone
James Malone
ventral striatum
Ventral is a geometric modifier describing parts pertaining to the front or anterior of any structure, for example ventral striatum.
ventral
MAT:0000493
Tomasz Adamusiak
fin bud
ZFA:0001383
James Malone
CS57580 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158604&type=germplasm
CS57580
http://www.arabidopsis.org/servlets/TairObject?id=1005158604&type=germplasm
James Malone
Sporadic amyotrophic lateral sclerosis is a amyotrophic lateral sclerosis in which there is no known cause, such as no family history.
sporadic amyotrophic lateral sclerosis
DOID:5706
dedifferentiated liposarcoma
A liposarcoma of any histologic subtype mixed with a non-lipomatous, high grade sarcomatous component. The non-lipomatous component may be present in the primary lesion or at the site of metastasis.
Dedifferentiated liposarcoma (disorder)
Dedifferentiated liposarcoma (disorder)[accessedResource: DOID:5706][accessDate: 04-11-2010]
A liposarcoma of any histologic subtype mixed with a non-lipomatous, high grade sarcomatous component. The non-lipomatous component may be present in the primary lesion or at the site of metastasis.[accessedResource: NCIt:C3704][accessDate: 04-11-2010]
Dedifferentiated liposarcoma (morphologic abnormality)
Tomasz Adamusiak
Dedifferentiated liposarcoma (morphologic abnormality)[accessedResource: DOID:5706][accessDate: 04-11-2010]
NCIt:C3704
James Malone
CS57637 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158661&type=germplasm
CS57637
http://www.arabidopsis.org/servlets/TairObject?id=1005158661&type=germplasm
dihydrotestoterone
Dihydrotestosteron
An androgen that has formula C19H30O2.
Androstanolone
androstanolonum
James Malone
5alpha-Dihydrotestosterone
androstanolona
InChI=1/C19H30O2/c1-18-9-7-13(20)11-12(18)3-4-14-15-5-6-17(21)19(15,2)10-8-16(14)18/h12,14-17,21H,3-11H2,1-2H3/t12-,14-,15-,16-,17-,18-,19-/m0/s1
DIHYDROTESTOSTERONE
17beta-hydroxy-5alpha-androstan-3-one
CHEBI:16330
InChIKey=NVKAWKQGWWIWPM-ABEVXSGRBZ
17beta-hydroxyandrostan-3-one
http://www.ebi.ac.uk/efo/EFO_0002007
Stanolone
[H][C@@]12CC[C@@]3([H])[C@]4([H])CC[C@H](O)[C@@]4(C)CC[C@]3([H])[C@@]1(C)CCC(=O)C2
C19H30O2
Sprague Dawley
Rats, Sprague Dawley[accessedResource: NIFSTD:birnlex_266][accessDate: 04-11-2010]
Tomasz Adamusiak
NIFSTD:birnlex_266
Rats, Sprague Dawley
RGD:70508
Sprague-Dawley rat
NIFSTD:birnlex_214
James Malone
Sprague-Dawley rat[accessedResource: NIFSTD:birnlex_266][accessDate: 04-11-2010]
James Malone
true
1.8
consolodated all strains into organism hierarchy
obsolete_strain factor
Natural Language Generator 8th April 2010
A Lbeta T2 is a cell line.
A Lbeta T2 is both something that derives from a mus musculus, and something that derives from a pituitary.
MCC:0000292
Ele Holloway
LbetaT2
James Malone
Ele Holloway
James Malone
NCI-H1650
James Malone
Jie Zheng
Tomasz Adamusiak
A mouse strain developed by selection for diabetes (high fasting blood glucose) from F6 of the CTS strain
BDC2.5/NOD is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/004460.html
BDC2.5/NOD
JAX:004460
BTO:0000717
EHDAA:5376
1: The conical sac of serous membrane that encloses the heart and the roots of the great blood vessels of vertebrates.n2: A cavity or space that contains the heart of an invertebrate and in arthropods is a part of the hemocoel.[accessedResource: BTO:0000717][accessDate: 04-11-2010]
EV:0100023
pericardial sac
pericardial sac[accessedResource: ZFA:0000054][accessDate: 04-11-2010]
James Malone
Organ cluster which has as its parts the fibrous pericardium and the pericardial sac.
FMAID:9869
pericardium
MAT:0000454
ZFA:0000054
EMAPA:17174
1: The conical sac of serous membrane that encloses the heart and the roots of the great blood vessels of vertebrates.n2: A cavity or space that contains the heart of an invertebrate and in arthropods is a part of the hemocoel.
Ele Holloway
James Malone
SW837
James Malone
http://www.ebi.ac.uk/efo/EFO_0001448
Bacteria
Ele Holloway
James Malone
Natural Language Generator 8th April 2010
AB140H is an Ara-C-resistant murine leukemia.
B140H
Tomasz Adamusiak
true
obsolete_experiment
NIFSTD:birnlex_2117
The bladder-like rectum is bounded by a layer of circular muscle fibres and by sparser longitudinal fibres.[accessedResource: TGMA:0001028][accessDate: 04-11-2010]
XAO:0000238
WBbt:0005773
EHDAA:EHDAA\:5836
rectal sac
TADS:0000166
EMAPA:17896
intestinum rectum
SAEL:88
EV:0100081
FBbt:00005756
rectum
rectal sac[accessedResource: MAT:0000050][accessDate: 04-11-2010]
The terminal part of the intestine from the sigmoid flexure to the anus.
intestinum rectum[accessedResource: BTO:0001158][accessDate: 04-11-2010]
The terminal part of the intestine from the sigmoid flexure to the anus.[accessedResource: BTO:0001158][accessDate: 04-11-2010]
MA:0000336
adult rectum[accessedResource: TGMA:0001028][accessDate: 04-11-2010]
MAT:0000050
adult rectum
BTO:0001158
James Malone
FMAID:14544
The bladder-like rectum is bounded by a layer of circular muscle fibres and by sparser longitudinal fibres.
TGMA:0001028
MFO:0003040
The tubular part of the alimentary canal that extends from the stomach to the anus.
AAO:0000246
ZFA:0001338
MAT:0000043
TADS:0000165
bowel[accessedResource: BTO:0000648][accessDate: 04-11-2010]
The tubular part of the alimentary canal that extends from the stomach to the anus.[accessedResource: BTO:0000648][accessDate: 04-11-2010]
James Malone
TGMA:0001819
adult alimentary canal[accessedResource: TGMA:0001819][accessDate: 04-11-2010]
The fluid-feeding habit of adult mosquitoes is reflected in the structure and ultrastructure of the alimentary canal.
intestine
EHDAA:518
intestines
The fluid-feeding habit of adult mosquitoes is reflected in the structure and ultrastructure of the alimentary canal.[accessedResource: TGMA:0001819][accessDate: 04-11-2010]
WBbt:0005772
SAEL:55
adult alimentary canal
MA:0000328
Bowel
gut[accessedResource: MAT:0000043][accessDate: 04-11-2010]
XAO:0000129
gut
EV:0100071
intestines[accessedResource: MAT:0000043][accessDate: 04-11-2010]
BTO:0000648
TAO:0001338
FMAID:7199
Ele Holloway
James Malone
aggressive insulitis
InChIKey=RJURFGZVJUQBHK-HQANWYOLDQ
ActD
[H][C@@]12CCCN1C(=O)[C@H](NC(=O)[C@@H](NC(=O)c1ccc(C)c3oc4c(C)c(=O)c(N)c(C(=O)N[C@H]5[C@@H](C)OC(=O)[C@H](C(C)C)N(C)C(=O)CN(C)C(=O)[C@]6([H])CCCN6C(=O)[C@H](NC5=O)C(C)C)c4nc13)[C@@H](C)OC(=O)[C@H](C(C)C)N(C)C(=O)CN(C)C2=O)C(C)C
actinomycin C1
An actinomycin that has formula C62H86N12O16.
C62H86N12O16
actinomycin D
InChI=1/C62H86N12O16/c1-27(2)42-59(84)73-23-17-19-36(73)57(82)69(13)25-38(75)71(15)48(29(5)6)61(86)88-33(11)44(55(80)65-42)67-53(78)35-22-21-31(9)51-46(35)64-47-40(41(63)50(77)32(10)52(47)90-51)54(79)68-45-34(12)89-62(87)49(30(7)8)72(16)39(76)26-70(14)58(83)37-20-18-24-74(37)60(85)43(28(3)4)66-56(45)81/h21-22,27-30,33-34,36-37,42-45,48-49H,17-20,23-26,63H2,1-16H3,(H,65,80)(H,66,81)(H,67,78)(H,68,79)/t33-,34-,36+,37+,42-,43-,44+,45+,48+,49+/m1/s1/f/h65-68H
2-amino-4,6-dimethyl-3-oxo-1-N,9-N-bis-[(18aS)-10c,14,17-trimethyl-5,8,12,15,18-pentaoxo-6c,13t-di(propan-2-yl)-18ar-hexadecahydro-1H-pyrrolo[2,1-i][1,4,7,10,13]oxatetraazacyclohexadecin-9c-yl]-3H-phenoxazine-1,9-dicarboxamide
James Malone
actinomycin IV
Dactinomycin
CHEBI:27666
2-amino-N,N'-bis(hexadecahydro-2,5,9-trimethyl-6,13-bis(1-methylethyl)-1,4,7,11,14-pentaoxo-1H-pyrrolo(2,1-i)(1,4,7,10,13)oxatetra-azacyclohexadecin-10-yl)-4,6-dimethyl-3-oxo-3H-phenoxazine-1,9-dicarboxamide
http://www.ebi.ac.uk/efo/EFO_0001478
CHEBI:22676
James Malone
http://www.ebi.ac.uk/efo/EFO_0001818
Any of a group of compounds, both naturally occurring and synthetic, that regulate aspects of plant growth (from Greek alphaupsilonxialphanuomega, "to grow").
auxin
auxins
James Malone
CS57586 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158610&type=germplasm
CS57586
http://www.arabidopsis.org/servlets/TairObject?id=1005158610&type=germplasm
Jie Zheng
Tomasz Adamusiak
intestinal endoderm
antiprogestin
Org 31710
Ele Holloway
James Malone
Tomasz Adamusiak
3-aminobenzamide
CASRN:3544-24-9
M-aminobenzamide; 3-Aba; 3-AB
Tomasz Adamusiak
gill filament
ZFA:0000667
NIFSTD:birnlex_2015
A unit of measurement is a standardized quantity of a physical quality.
true
MO_3
http://www.ebi.ac.uk/efo/EFO_0001446
James Malone
Tomasz Adamusiak
unit
Jie Zheng
James Malone
InChIKey=QIKVYJOCQXXRSJ-CKKAGOBJDQ
CHEBI:50862
Ele Holloway
http://www.ebi.ac.uk/efo/EFO_0002005
azinomycin B
http://www.ebi.ac.uk/efo/EFO_0002400
[H][C@@]12C[N@@H]1C(\\[C@@H](OC(C)=O)[C@@H]2O)=C(\\NC(=O)[C@@H](OC(=O)c3cc(OC)cc4c(C)cccc34)[C@]5(C)CO5)C(=O)N\\C(=C/O)C(C)=O
C31H33N3O11
(1S)-2-{[(1E)-1-[(3R,4R,5S)-3-(acetyloxy)-4-hydroxy-1-azabicyclo[3.1.0]hex-2-ylidene]-2-{[(1Z)-1-(hydroxymethylidene)-2-oxopropyl]amino}-2-oxoethyl]amino}-1-[(2S)-2-methyloxiran-2-yl]-2-oxoethyl 3-methoxy-5-methylnaphthalene-1-carboxylate
InChI=1/C31H33N3O11/c1-14-7-6-8-18-19(14)9-17(42-5)10-20(18)30(41)45-27(31(4)13-43-31)29(40)33-23(28(39)32-21(12-35)15(2)36)24-26(44-16(3)37)25(38)22-11-34(22)24/h6-10,12,22,25-27,35,38H,11,13H2,1-5H3,(H,32,39)(H,33,40)/b21-12-,24-23+/t22-,25+,26+,27+,31-,34-/m0/s1/f/h32-33H
A naphthalene that has formula C31H33N3O11.
1: The human or animal body apart from the head and appendages.n2: The thorax of an insect.
James Malone
1: The human or animal body apart from the head and appendages.n2: The thorax of an insect.[accessedResource: BTO:0001493][accessDate: 04-11-2010]
MFO:0001720
Subdivision of body proper, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with the ribcage, thoracic and lumbar vertebral column, sacrum and coccyx, it is partially surrounded by skin of trunk. Examples: There is only one trunk.
XAO:0003025
Organism subdivision which is the part of the body posterior to the head and anterior to the tail.
NIFSTD:sao1078172392
SAEL:112
trunk
Torso[accessedResource: FMAID:7181][accessDate: 04-11-2010]
TAO:0001115
Tomasz Adamusiak
Torso
MAT:0000296
BTO:0001493
FMAID:7181
Organism subdivision which is the part of the body posterior to the head and anterior to the tail.[accessedResource: TAO:0001115][accessDate: 04-11-2010]
James Malone
intestinal primordium
A primordium is a tissue modifier describing an organ or tissue in its earliest recognizable stage of development. For example, intestinal primordium.
primordium
MAT:0000482
propanecarboxylate
InChI=1/C4H8O2/c1-2-3-4(5)6/h2-3H2,1H3,(H,5,6)/p-1/fC4H7O2/q-1
n-butyrate
http://www.ebi.ac.uk/efo/EFO_0001496
A fatty acid anion that has formula C4H7O2.
butanate
propylformate
butyrate
CHEBI:17968
InChIKey=FERIUCNNQQJTOY-PAXZUDBGCU
n-butanoate
CCCC([O-])=O
The conjugate base of butyric acid.
butanoic acid, ion(1-)
1-propanecarboxylate
butanoate
1-butyrate
ethylacetate
CH3-[CH2]2-COO(-)
1-butanoate
A straight-chain saturated fatty acid anion that has formula C4H7O2.
C4H7O2
James Malone
CS57810 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158834&type=germplasm
CS57810
http://www.arabidopsis.org/servlets/TairObject?id=1005158834&type=germplasm
BRL 15572 hydrochloride
CASRN:193611-72-2
Tomasz Adamusiak
Ele Holloway
3-[4-(4-chlorophenyl)piperazin-1-yl]-1,1-diphenyl-2-pro panol hydrochloride
James Malone
DSSTox_Generic_SID:C25H28Cl2N2O
STRUCTURE_Formula:3-[4-(3-chlorophenyl)piperazin-1-yl]-1,1-diphenylpropan-2-ol hydrochloride
DSSTox_CID:42620
spiracle
TADS:0000524
spiracular gland[accessedResource: MAT:0000208][accessDate: 04-11-2010]
Opening of the tracheal system on the surface of the body.
spiraculum
MAT:0000208
spiraculum[accessedResource: TGMA:0000578][accessDate: 04-11-2010]
James Malone
The mostly slit-like opening on the body surface of the insects through which air is taken into the respiratory system.
FBbt:00005054
spiracular gland
TGMA:0000578
In its simplest form, the aperture or opening into a trachea (primary tracheal orifice); in most insects, sunken below the surface of the integument (secondary orifice) thus comprising a chamber, the spiracular atrium, and the external opening into this chamber, the spiracular opening.
In its simplest form, the aperture or opening into a trachea (primary tracheal orifice); in most insects, sunken below the surface of the integument (secondary orifice) thus comprising a chamber, the spiracular atrium, and the external opening into this chamber, the spiracular opening.[accessedResource: TGMA:0000578][accessDate: 04-11-2010]
Opening of the tracheal system on the surface of the body.[accessedResource: FBbt:00005054][accessDate: 04-11-2010]
Ele Holloway
James Malone
KYSE30
Ele Holloway
James Malone
A7
nervous system developmental tissue
Jie Zheng
Tomasz Adamusiak
C57Bl/6 derived nonobese diabetic (NOD) mouse strain.
NOD.B6
https://www.cbil.upenn.edu/RADQuerier/php/displayStudy.php?study_id=2424
1.5
Ductal Carcinoma of the Breast
ductal breast carcinoma[accessedResource: DOID:3008][accessDate: 10-05-2010]
Ductal Carcinoma of Breast[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
Duct Adenocarcinoma
true
Duct Adenocarcinoma[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
Duplicate with invasive ductal carcinoma (EFO_0000186)
Duct Carcinoma
obsolete_ductal breast carcinoma
ductal adenocarcinoma[accessedResource: DOID:3008][accessDate: 10-05-2010]
ductal carcinoma
Duct Carcinoma[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
Ductal Carcinoma[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
Ductal Carcinoma of Breast
DOID:3008
NCIt:C4017
Ductal Carcinoma of the Breast[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
Ductal Breast Carcinoma
James Malone
Ductal Adenocarcinoma
A carcinoma arising from the ducts. While ductal carcinomas can arise at other sites, this term is universally used to refer to carcinomas of the breast. Ductal carcinomas account for about two thirds of all breast cancers. Two types of ductal carcinomas have been described: Ductal carcinoma in situ (DCIS) and invasive ductal carcinoma, not otherwise specified. The latter often spreads to the axillary lymph nodes and other anatomic sites. The two forms of ductal carcinoma often coexist.[accessedResource: NCIt:C4017][accessDate: 10-05-2010]
A carcinoma arising from the ducts. While ductal carcinomas can arise at other sites, this term is universally used to refer to carcinomas of the breast. Ductal carcinomas account for about two thirds of all breast cancers. Two types of ductal carcinomas have been described: Ductal carcinoma in situ (DCIS) and invasive ductal carcinoma, not otherwise specified. The latter often spreads to the axillary lymph nodes and other anatomic sites. The two forms of ductal carcinoma often coexist.
BxPC3
BTO:0001861
BxPC-3 cell
James Malone
Ele Holloway
BxPC3 cell
Human pancreatic adenocarcinoma cell line, established from a 61 year old human female.
BxPC3 cell[accessedResource: BTO:0001861][accessDate: 04-11-2010]
BxPC-3
BxPC-3 cell[accessedResource: BTO:0001861][accessDate: 04-11-2010]
Bx-PC3 cell[accessedResource: BTO:0001861][accessDate: 04-11-2010]
Bx-PC3 cell
HTL96012
Human pancreatic adenocarcinoma cell line, established from a 61 year old human female.[accessedResource: BTO:0001861][accessDate: 04-11-2010]
Tomasz Adamusiak
neural crest midbrain
ZFA:0000935
James Malone
http://www.ebi.ac.uk/efo/EFO_0002641
Gorilla gorilla
Western gorilla
Ele Holloway
DSSTox_Generic_SID:22527
STRUCTURE_ChemicalName_IUPAC:propyl 4-hydroxybenzoate
Tomasz Adamusiak
STRUCTURE_Formula:C10H12O3
propylparaben
DSSTox_CID:2527
James Malone
CASRN:94-13-3
Tomasz Adamusiak
tibia
FMAID:24476
A precursor B cell is a B cell with the phenotype CD10-positive (P08473/NEP_HUMAN; PIRSF001194).
precursor B cell[accessedResource: CL:0000817][accessDate: 04-11-2010]
pre-BI cell
A precursor B cell is a B cell with the phenotype CD10-positive.
CL:0000817
pre-B cell
B-cell precursor
A precursor B cell is a B cell with the phenotype CD10-positive.[accessedResource: CL:0000817][accessDate: 04-11-2010]
James Malone
James Malone
embryonic central brain
FBbt:00005662
James Malone
AU565
Ele Holloway
James Malone
WE-68
dl
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001716
A deciliter is a volume unit which is equal to one tenth of a liter or 10^-1 L.
A volume unit which is equal to one tenth of a liter or 10^[-1] L.
Tomasz Adamusiak
true
MO_624
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#dl
deciliter
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#dl[accessedResource: MO_624][accessDate: 04-11-2010]
adrenocortical adenoma
Adrenal cortical adenoma NOS (morphologic abnormality)[accessedResource: DOID:4317][accessDate: 04-11-2010]
Adrenal cortical adenoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:4317][accessDate: 04-11-2010]
Adrenal cortical adenoma (disorder)[accessedResource: DOID:4317][accessDate: 04-11-2010]
Tomasz Adamusiak
adrenal cortical adenoma
Adrenal cortical adenoma - morphology
Adrenal cortical adenoma (disorder)
adrenal cortical adenoma[accessedResource: DOID:4317][accessDate: 04-11-2010]
DOID:4317
Adrenal cortical adenoma, no ICD-O subtype (morphologic abnormality)
Adrenal cortical adenoma NOS (morphologic abnormality)
Adrenal cortical adenoma - morphology[accessedResource: DOID:4317][accessDate: 04-11-2010]
James Malone
embryonic central brain neuron
FBbt:00005665
NCI-H520
H520
James Malone
Ele Holloway
James Malone
HSSultan
Jie Zheng
Tomasz Adamusiak
esophageal endoderm
Tomasz Adamusiak
floor plate neural tube
ZFA:0001434
FBbt:00003007
craniofacial tissue
ZFA:0001114
epicranial plate
TGMA:0000720
head[accessedResource: ZFA:0001114][accessDate: 04-11-2010]
head tissue[accessedResource: MAT:0000017][accessDate: 04-11-2010]
head
adult head
adult head[accessedResource: FBbt:00003007][accessDate: 04-11-2010]
The larval cranium exclusive of the dorsal apotome.
MAT:0000017
epicranial plate[accessedResource: MAT:0000017][accessDate: 04-11-2010]
MA:0000316
Organism subdivision which is the part of the body which consists of the cranial and pharyngeal regions.
Organism subdivision which is the part of the body which consists of the cranial and pharyngeal regions.[accessedResource: ZFA:0001114][accessDate: 04-11-2010]
James Malone
head tissue
The larval cranium exclusive of the dorsal apotome.[accessedResource: TGMA:0000720][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0002700
A mass spectrometer is an instrument which is used to measure the mass to charge ratio of ions. All mass spectrometers consist of three basic parts: an ion source, a mass analyzer, and a detector system. The stages within the mass spectrometer are: 1. Production of ions from the sample 2. Separation of ions with different masses 3. Detection of the number of ions of each mass produced 4.Collection of data to generate the mass spectrum
mass spectrometer
Heart failure NOS[accessedResource: DOID:6000][accessDate: 04-11-2010]
Heart failure (disorder)
Heart failure NOS (disorder)[accessedResource: DOID:6000][accessDate: 04-11-2010]
Heart: [weak] or [failure NOS][accessedResource: DOID:6000][accessDate: 04-11-2010]
Heart failure NOS
DOID:6000
Weak heart
Heart failure NOS (disorder)
Heart failure, unspecified
heart failure
Heart failure (disorder)[accessedResource: DOID:6000][accessDate: 04-11-2010]
Weak heart[accessedResource: DOID:6000][accessDate: 04-11-2010]
Heart failure, unspecified[accessedResource: DOID:6000][accessDate: 04-11-2010]
Heart: [weak] or [failure NOS]
Tomasz Adamusiak
James Malone
GeneRIF:14755370
Haemoglobin S-S disease
Sickle cell anemia of unspecified type (disorder)
SICKLE CELL DISEASE NOS[accessedResource: ICD9:282.60][accessDate: 04-11-2010]
Other sickle-cell disease without crisis[accessedResource: ICD9:282.68][accessDate: 04-11-2010]
Sickle cell anaemia[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
Drepanocythemia[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
SNOMEDCT:191195005
Hemoglobin S disease
Sickle-cell disease, unspecified
Hemoglobin SS disease without crisis (disorder)
GeneRIF:12714517
Other sickle-cell disease without crisis
GeneRIF:15153712
Sickle cell anemia[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
Hb S disease
A blood disorder characterized by the appearance of sickle-shaped red blood cells and anemia.
GeneRIF:15834635
Haemoglobin S-S disease[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
Drepanocythaemia
ICD9:282.68
SICKLE CELL DISEASE NOS
HB-SS DIS NEC W CRISIS
Sickle cell anemia NOS (disorder)
Sickle cell anaemia NOS
Haemoglobin S disease[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
GeneRIF:12928439
GeneRIF:12673836
ICD9:282.6
HB-S DIS W/O CRISIS NEC
Hemoglobin S disease without crisis (disorder)
HB-SS DIS NEC W CRISIS[accessedResource: ICD9:282.69][accessDate: 04-11-2010]
A blood disorder characterized by the appearance of sickle-shaped red blood cells and anemia.[accessedResource: NCIt:C34383][accessDate: 04-11-2010]
Other sickle-cell disease with crisis[accessedResource: ICD9:282.69][accessDate: 04-11-2010]
GeneRIF:15586174
Hereditary hemoglobinopathy disorder homozygous for hemoglobin S (disorder)[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
Sickle-cell disease, unspecified[accessedResource: ICD9:282.60][accessDate: 04-11-2010]
ICD9:282.60
GeneRIF:15609334
Hereditary hemoglobinopathy disorder homozygous for hemoglobin S[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
Other sickle-cell disease with crisis
GeneRIF:12850481
SNOMEDCT:191199004
GeneRIF:15271798
Sickle cell anaemia NOS[accessedResource: SNOMEDCT:191199004][accessDate: 04-11-2010]
GeneRIF:12549821
Drepanocythaemia[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
GeneRIF:12773623
GeneRIF:12677174
Sickle cell anemia
GeneRIF:14967817
Sickle cell anaemia of unspecified type
GeneRIF:14579408
Sickle cell anemia NOS
ICD9:282.69
Hemoglobin S disease without crisis (disorder)[accessedResource: DOID:10923][accessDate: 04-11-2010]
NCIt:C34383
Sickle cell anemia NOS[accessedResource: SNOMEDCT:191199004][accessDate: 04-11-2010]
GeneRIF:12601490
Sickle cell syndrome
Drepanocythemia
sickle cell disease
GeneRIF:11869935
Hb S disease[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
Hemoglobin S-S disease
GeneRIF:15556687
GeneRIF:15388579
Hb SS disease
Hemoglobin SS disease without crisis (disorder)[accessedResource: DOID:10923][accessDate: 04-11-2010]
Sickle cell anaemia
Hemoglobin S-S disease[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
Hemoglobin S disease[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
GeneRIF:15855323
GeneRIF:15297857
Sickle cell anemia NOS (disorder)[accessedResource: SNOMEDCT:191199004][accessDate: 04-11-2010]
Sickle cell syndrome[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
Sickle cell anemia of unspecified type[accessedResource: SNOMEDCT:191195005][accessDate: 04-11-2010]
GeneRIF:15556291
GeneRIF:14683458
Hb SS disease[accessedResource: SNOMEDCT:127040003][accessDate: 04-11-2010]
Hb-SS disease without crisis[accessedResource: DOID:10923][accessDate: 04-11-2010]
DOID:10923
Haemoglobin S disease
Sickle cell anaemia of unspecified type[accessedResource: SNOMEDCT:191195005][accessDate: 04-11-2010]
SNOMEDCT:127040003
Sickle cell anemia of unspecified type (disorder)[accessedResource: SNOMEDCT:191195005][accessDate: 04-11-2010]
GeneRIF:15662557
HB-S DIS W/O CRISIS NEC[accessedResource: ICD9:282.68][accessDate: 04-11-2010]
Hereditary hemoglobinopathy disorder homozygous for hemoglobin S (disorder)
GeneRIF:15023184
Hb-SS disease without crisis
Hereditary hemoglobinopathy disorder homozygous for hemoglobin S
Sickle cell anemia of unspecified type
DSSTox_Generic_SID:C13H14N2
tacrine
CASRN:321-64-2
James Malone
STRUCTURE_Formula:1,2,3,4-tetrahydroacridin-9-amine
Ele Holloway
Tomasz Adamusiak
DSSTox_CID:37272
James Malone
plasmacytoid monocyte[accessedResource: CL:0000784][accessDate: 04-11-2010]
T-associated plasma cell
interferon-producing cell[accessedResource: CL:0000784][accessDate: 04-11-2010]
IPC[accessedResource: CL:0000784][accessDate: 04-11-2010]
CL:0000784
plasmacytoid dendritic cell
interferon-producing cell
DC2
lymphoid dendritic cell[accessedResource: CL:0000784][accessDate: 04-11-2010]
pDC[accessedResource: CL:0000784][accessDate: 04-11-2010]
T-associated plasma cell[accessedResource: CL:0000784][accessDate: 04-11-2010]
pDC
lymphoid dendritic cell
plasmacytoid T cell[accessedResource: CL:0000784][accessDate: 04-11-2010]
A dendritic cell type of distinct morphology, localization, and surface marker expression from other dendritic cell types and associated with early stage immune responses, particularly the release of physiologically abundant amounts of type I interferons in response to infection.[accessedResource: CL:0000784][accessDate: 04-11-2010]
A dendritic cell type of distinct morphology, localization, and surface marker expression from other dendritic cell types and associated with early stage immune responses, particularly the release of physiologically abundant amounts of type I interferons in response to infection.
DC2[accessedResource: CL:0000784][accessDate: 04-11-2010]
plasmacytoid monocyte
IPC
plasmacytoid T cell
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#in_vitro_design[accessedResource: MO_347][accessDate: 04-11-2010]
Tomasz Adamusiak
in vitro design
MO_347
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#in_vitro_design
Tomasz Adamusiak
branchiostegal ray 2
ZFA:0001281
Respiratory disorder
Lung involvement in conditions classified elsewhere
Unspecified disease of respiratory system[accessedResource: ICD9:519.9][accessDate: 04-11-2010]
ICD9:508.1
Other specified alveolar and parietoalveolar pneumonopathies[accessedResource: ICD9:516.8][accessDate: 04-11-2010]
Disorder of respiratory system (disorder)[accessedResource: SNOMEDCT:50043002][accessDate: 04-11-2010]
LUNG INVOLV IN OTH DIS[accessedResource: ICD9:517.8][accessDate: 04-11-2010]
INORG DUST PNEUMOCON NEC
Lung involvement in other diseases classified elsewhere[accessedResource: ICD9:517.8][accessDate: 04-11-2010]
Other respiratory system diseases[accessedResource: SNOMEDCT:196057004][accessDate: 04-11-2010]
[X]Other diseases of the respiratory system (disorder)
Other diseases of respiratory system NOS
Unspecified disease of respiratory system
Other diseases of mediastinum, not elsewhere classified[accessedResource: ICD9:519.3][accessDate: 04-11-2010]
ICD9:516.8
[X]Respiratory conditions due to other specified external agents[accessedResource: SNOMEDCT:196243005][accessDate: 04-11-2010]
[X]Chronic and other pulmonary manifestations due to radiation[accessedResource: SNOMEDCT:196241007][accessDate: 04-11-2010]
DISEASES OF THE RESPIRATORY SYSTEM[accessedResource: ICD9:460-519.99][accessDate: 04-11-2010]
RESP COND: EXT AGENT NEC
[X]Other diseases of the respiratory system
CHR PUL MANIF D/T RADIAT[accessedResource: ICD9:508.1][accessDate: 04-11-2010]
[X]Respiratory conditions due to other specified external agents
RESP COND: EXT AGENT NOS[accessedResource: ICD9:508.9][accessDate: 04-11-2010]
Other diseases of respiratory system, not elsewhere classified[accessedResource: ICD9:519.8][accessDate: 04-11-2010]
RESP COND: EXT AGENT NOS
Pneumoconiosis due to other inorganic dust
Other diseases of respiratory system NOS (disorder)
Respiratory system diseases NOS (disorder)[accessedResource: SNOMEDCT:196185004][accessDate: 04-11-2010]
ICD9:519.8
respiratory system disease
SNOMEDCT:266373008
RESP SYSTEM DISEASE NEC
[X]Chronic and other pulmonary manifestations due to radiation (disorder)[accessedResource: SNOMEDCT:196241007][accessDate: 04-11-2010]
Respiratory system diseases NOS (disorder)
Other respiratory system diseases NOS
Disease of respiratory system (disorder)
PNEUMOCONIOSES AND OTHER LUNG DISEASES DUE TO EXTERNAL AGENTS[accessedResource: ICD9:500-508.99][accessDate: 04-11-2010]
ICD9:516
Other diseases of respiratory system, not elsewhere classified
ALVEOL PNEUMONOPATHY NEC
Disorder of respiratory system
[X]Other diseases of the respiratory system[accessedResource: SNOMEDCT:196255004][accessDate: 04-11-2010]
CHR PUL MANIF D/T RADIAT
[X]Respiratory conditions due to unspecified external agent (disorder)[accessedResource: SNOMEDCT:196244004][accessDate: 04-11-2010]
Pneumoconiosis due to other inorganic dust[accessedResource: ICD9:503][accessDate: 04-11-2010]
ICD9:500-508.99
ALVEOL PNEUMONOPATHY NOS[accessedResource: ICD9:516.9][accessDate: 04-11-2010]
Respiratory disorder[accessedResource: SNOMEDCT:50043002][accessDate: 04-11-2010]
Respiratory conditions due to unspecified external agent[accessedResource: ICD9:508.9][accessDate: 04-11-2010]
[X]Other diseases of the respiratory system (disorder)[accessedResource: SNOMEDCT:196255004][accessDate: 04-11-2010]
ICD9:503
[X]Respiratory conditions due to other specified external agents (disorder)
Other diseases of mediastinum, not elsewhere classified
Other specified alveolar and parietoalveolar pneumonopathies
Chronic and other pulmonary manifestations due to radiation
[X]Respiratory conditions due to unspecified external agent[accessedResource: SNOMEDCT:196244004][accessDate: 04-11-2010]
RESP SYSTEM DISEASE NOS
RESP SYSTEM DISEASE NEC[accessedResource: ICD9:519.8][accessDate: 04-11-2010]
INORG DUST PNEUMOCON NEC[accessedResource: ICD9:503][accessDate: 04-11-2010]
Other diseases of trachea and bronchus, not elsewhere classified
Lung involvement in other diseases classified elsewhere
MEDIASTINUM DISEASE NEC
ICD9:508.8
[X]Chronic and other pulmonary manifestations due to radiation
Other diseases of trachea and bronchus, not elsewhere classified[accessedResource: ICD9:519.1][accessDate: 04-11-2010]
SNOMEDCT:196185004
James Malone
Other respiratory system diseases NOS (disorder)
NCIt:C26871
Other alveolar and parietoalveolar pneumonopathy[accessedResource: ICD9:516][accessDate: 04-11-2010]
Other diseases of respiratory system NOS[accessedResource: SNOMEDCT:196184000][accessDate: 04-11-2010]
Respiratory conditions due to other and unspecified external agents[accessedResource: ICD9:508][accessDate: 04-11-2010]
Other respiratory system diseases (disorder)
ICD9:519.3
SNOMEDCT:196255004
SNOMEDCT:196057004
ICD9:519.9
DISEASES OF THE RESPIRATORY SYSTEM
ALVEOL PNEUMONOPATHY NEC[accessedResource: ICD9:516.8][accessDate: 04-11-2010]
Disease of respiratory system[accessedResource: SNOMEDCT:50043002][accessDate: 04-11-2010]
DOID:1579
RESP COND: EXT AGENT NEC[accessedResource: ICD9:508.8][accessDate: 04-11-2010]
Chronic and other pulmonary manifestations due to radiation[accessedResource: ICD9:508.1][accessDate: 04-11-2010]
Disease of respiratory system, NOS
SNOMEDCT:196241007
Unspecified alveolar and parietoalveolar pneumonopathy[accessedResource: ICD9:516.9][accessDate: 04-11-2010]
ICD9:517.8
RESP SYSTEM DISEASE NOS[accessedResource: ICD9:519.9][accessDate: 04-11-2010]
SNOMEDCT:196244004
Respiratory conditions due to other specified external agents
ICD9:508
Respiratory conditions due to unspecified external agent
Disease of respiratory system, NOS[accessedResource: SNOMEDCT:50043002][accessDate: 04-11-2010]
A body system disease that occurs in different organs functioning in respiration and consisting especially of the nose, nasal passages, nasopharynx, larynx, trachea, bronchi, and lungs.
SNOMEDCT:196184000
Other respiratory system diseases
PNEUMOCONIOSES AND OTHER LUNG DISEASES DUE TO EXTERNAL AGENTS
Respiratory system diseases NOS[accessedResource: SNOMEDCT:196185004][accessDate: 04-11-2010]
Other diseases of respiratory system[accessedResource: ICD9:519][accessDate: 04-11-2010]
Other diseases of respiratory system
Respiratory disease
ICD9:508.9
Disease of respiratory system
[X]Respiratory conditions due to unspecified external agent (disorder)
LUNG INVOLV IN OTH DIS
[X]Respiratory conditions due to unspecified external agent
Other alveolar and parietoalveolar pneumonopathy
ICD9:516.9
Disease of respiratory system (disorder)[accessedResource: SNOMEDCT:50043002][accessDate: 04-11-2010]
Other respiratory system diseases NOS[accessedResource: SNOMEDCT:266373008][accessDate: 04-11-2010]
ICD9:510-519.99
SNOMEDCT:196243005
Other diseases of respiratory system NOS (disorder)[accessedResource: SNOMEDCT:196184000][accessDate: 04-11-2010]
Respiratory disorder, NOS[accessedResource: SNOMEDCT:50043002][accessDate: 04-11-2010]
A body system disease that occurs in different organs functioning in respiration and consisting especially of the nose, nasal passages, nasopharynx, larynx, trachea, bronchi, and lungs.[accessedResource: DOID:1579][accessDate: 04-11-2010]
ALVEOL PNEUMONOPATHY NOS
SNOMEDCT:50043002
ICD9:519
Lung involvement in conditions classified elsewhere[accessedResource: ICD9:517][accessDate: 04-11-2010]
Disorder of respiratory system (disorder)
ICD9:460-519.99
Disorder of respiratory system[accessedResource: SNOMEDCT:50043002][accessDate: 04-11-2010]
Respiratory conditions due to other specified external agents[accessedResource: ICD9:508.8][accessDate: 04-11-2010]
Respiratory system diseases NOS
Respiratory disease[accessedResource: SNOMEDCT:50043002][accessDate: 04-11-2010]
[X]Chronic and other pulmonary manifestations due to radiation (disorder)
MEDIASTINUM DISEASE NEC[accessedResource: ICD9:519.3][accessDate: 04-11-2010]
Respiratory disorder, NOS
Other respiratory system diseases (disorder)[accessedResource: SNOMEDCT:196057004][accessDate: 04-11-2010]
Unspecified alveolar and parietoalveolar pneumonopathy
Other respiratory system diseases NOS (disorder)[accessedResource: SNOMEDCT:266373008][accessDate: 04-11-2010]
ICD9:517
ICD9:519.1
Respiratory conditions due to other and unspecified external agents
[X]Respiratory conditions due to other specified external agents (disorder)[accessedResource: SNOMEDCT:196243005][accessDate: 04-11-2010]
Tomasz Adamusiak
medial octavolateralis nucleus
ZFA:0000291
James Malone
CS57714 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158738&type=germplasm
CS57714
http://www.arabidopsis.org/servlets/TairObject?id=1005158738&type=germplasm
ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
InChI=1/C10H12N5O6P/c11-8-5-9(13-2-12-8)15(3-14-5)10-6(16)7-4(20-10)1-19-22(17,18)21-7/h2-4,6-7,10,16H,1H2,(H,17,18)(H2,11,12,13)/t4-,6-,7-,10-/m1/s1/f/h17H,11H2
Adenosine 3',5'-phosphate
Cyclic adenylic acid
Cyclic AMP
(2R,4aR,6R,7R,7aS)-6-(6-amino-9H-purin-9-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol 2-oxide
C10H12N5O6P
Nc1ncnc2n(cnc12)[C@@H]1O[C@@H]2COP(O)(=O)O[C@H]2[C@H]1O
3',5'-cyclic purine nucleotide having having adenine as the nucleobase.
CHEBI:17489
adenosine 3',5'-(hydrogen phosphate)
cAMP
A 3',5'-cyclic purine nucleotide that has formula C10H12N5O6P.
http://www.ebi.ac.uk/efo/EFO_0001471
3',5'-cyclic AMP
InChIKey=IVOMOUWHDPKRLL-BJEHYBLCDS
Tomasz Adamusiak
lateral floor plate
ZFA:0001256
STRUCTURE_ChemicalName_IUPAC:(1S,4S)-4-(3,4-dichlorophenyl)-N-methyl-1,2,3,4-tetrahydronaphthalen-1-amine hydrochloride
James Malone
CASRN:79559-97-0
DSSTox_Generic_SID:40243
Ele Holloway
sertraline hydrochloride
DSSTox_CID:20243
Tomasz Adamusiak
STRUCTURE_Formula:C17H18Cl3N
The distinct stages of the life cycle of a protozoon of the genus Plasmodium.[accessedResource: IDOMAL:0000296][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
The distinct stages of the life cycle of a protozoon of the genus Plasmodium.
plasmodium parasite stage
IDOMAL:0000296
squamous cell carcinoma of head and neck[accessedResource: DOID:5520][accessDate: 04-11-2010]
Carcinoma of Head and Neck
Head and Neck Carcinoma
A carcinoma of any tissue within the head and neck region.[accessedResource: NCIt:C35850][accessDate: 04-11-2010]
squamous cell carcinoma of the head and neck[accessedResource: DOID:5520][accessDate: 04-11-2010]
SCCHN[accessedResource: NCIt:C34447][accessDate: 04-11-2010]
carcinoma of the head and neck
head and neck squamous cell carcinoma
carcinoma of the head and neck[accessedResource: DOID:5520][accessDate: 04-11-2010]
DOID:5520
Squamous Cell Carcinoma of Head and Neck
NCIt:C34447
A carcinoma of any tissue within the head and neck region.
Head and Neck Carcinoma[accessedResource: NCIt:C35850][accessDate: 04-11-2010]
NCIt:C35850
SCCHN
squamous cell carcinoma of the head and neck
Carcinoma of Head and Neck[accessedResource: NCIt:C35850][accessDate: 04-11-2010]
James Malone
James Malone
http://www.ebi.ac.uk/efo/EFO_0002653
Pongo pygmaeus
Bornean Orangutan
FBbt:00004970
James Malone
cuticle[accessedResource: MAT:0000150][accessDate: 04-11-2010]
cuticle
exoskeleton
The outer non-living layer of the integumentary system derived from the epidermis.
The outer non-living layer of the integumentary system derived from the epidermis.[accessedResource: FBbt:00004970][accessDate: 04-11-2010]
MAT:0000150
Tomasz Adamusiak
advanced heart failure
ACC Stage D
NYHA class IV
EV:0100095
EHDAA:5901
renal system
TADS:0000162
excretory system[accessedResource: FBbt:00005056][accessDate: 04-11-2010]
urinary system
TAO:0000163
FMAID:7159
WBbt:0005736
EMAPA:17366
SAEL:116
urinary system[accessedResource: MAT:0000027][accessDate: 04-11-2010]
excretory system
James Malone
Systema urinaria
renal/urinary system
renal/urinary system[accessedResource: MAT:0000027][accessDate: 04-11-2010]
ZFA:0000163
XAO:0000143
FBbt:00005056
MAT:0000027
James Malone
mandibula[accessedResource: BTO:0001748][accessDate: 04-11-2010]
lower jaw bone
1: The lower jaw of a vertebrate animal. n2. Either the upper or lower part of the beak in birds.[accessedResource: BTO:0001748][accessDate: 04-11-2010]
1: The lower jaw of a vertebrate animal. n2. Either the upper or lower part of the beak in birds.
mandibula
mandible
BTO:0001748
[H][C@]12CC[C@]3(C)C(O)CC[C@@]3([H])[C@]1([H])CCc1cc(O)ccc21
estra-1,3,5(10)-triene-3,17-diol
InChI=1/C18H24O2/c1-18-9-8-14-13-5-3-12(19)10-11(13)2-4-15(14)16(18)6-7-17(18)20/h3,5,10,14-17,19-20H,2,4,6-9H2,1H3/t14-,15-,16+,17?,18+/m1/s1
estradiol
A steroid hormone that has formula C18H24O2.
C18H24O2
http://www.ebi.ac.uk/efo/EFO_0001529
InChIKey=VOXZDWNPVJITMN-WKUFJEKOBY
oestradiol
Ele Holloway
James Malone
Calu6
Calu-6
James Malone
The pressure exerted by a liquid as a result of its potential energy, ignoring its kinetic energy.
hydrostatic pressure
GeneRIF:11937265
HTLV ALL[accessedResource: MSH:D015459][accessDate: 04-11-2010]
Precursor T-cell lymphoblastic leukaemia
HTLV-Associated Leukemia-Lymphoma
Leukemia Lymphoma, T Cell, Acute, HTLV I Associated
T-ALL
T Acute Lymphoblastic Leukemia
Human T Lymphotropic Virus-Associated Leukemia-Lymphoma
Human T-Cell Leukemia-Lymphoma[accessedResource: MSH:D015459][accessDate: 04-11-2010]
Adult T-Cell Leukemia-Lymphoma
GeneRIF:16326981
GeneRIF:15472075
T-cell acute lymphoblastic leukemia (disorder)
Acute lymphoblastic leukemia of T-cell origin. It comprises about 15% of childhood cases and 25% of adult cases. It is more common in males than females. (WHO, 2001)[accessedResource: NCIt:C3183][accessDate: 04-11-2010]
Precursor T-cell lymphoblastic leukemia
Acute T Cell Lymphocytic Leukemia[accessedResource: NCIt:C3183][accessDate: 04-11-2010]
T Acute Lymphoblastic Leukemia[accessedResource: NCIt:C3183][accessDate: 04-11-2010]
T-Cell Leukemia-Lymphomas, Human
acute T cell leukemia
T-Cell Leukemia-Lymphoma, Human
GeneRIF:12970786
HTLV I Associated T Cell Leukemia Lymphoma[accessedResource: MSH:D015459][accessDate: 04-11-2010]
HTLV Associated Leukemia Lymphoma[accessedResource: MSH:D015459][accessDate: 04-11-2010]
T-Cell Type Acute Leukemia
This type of acute lymphoblastic leukemia comprises about 15% of childhood cases and 25% of adult cases. It is more common in males than females. (WHO, 2001)
Leukemia-Lymphomas, HTLV-I-Associated T-Cell
ATLL[accessedResource: MSH:D015459][accessDate: 04-11-2010]
Adult T-Cell Leukemia-Lymphomas
T-cell acute lymphoblastic leukaemia[accessedResource: SNOMEDCT:277575008][accessDate: 04-11-2010]
HTLV-Associated Leukemia-Lymphomas
HTLV-I-Associated T-Cell Leukemia-Lymphomas[accessedResource: MSH:D015459][accessDate: 04-11-2010]
Leukemia-Lymphomas, Human T-Cell[accessedResource: MSH:D015459][accessDate: 04-11-2010]
T-ALL[accessedResource: NCIt:C3183][accessDate: 04-11-2010]
Leukemia-Lymphoma, T-Cell, Acute, HTLV-I-Associated[accessedResource: MSH:D015459][accessDate: 04-11-2010]
T-Cell Type Acute Leukemia[accessedResource: NCIt:C3183][accessDate: 04-11-2010]
Acute lymphoblastic leukemia of T-cell origin. It comprises about 15% of childhood cases and 25% of adult cases. It is more common in males than females. (WHO, 2001)
NCIt:C3183
Leukemia, Adult T-Cell
MSH:D015459
Precursor T-Lymphoblastic Leukemia[accessedResource: NCIt:C3183][accessDate: 04-11-2010]
SNOMEDCT:277575008
T-cell acute lymphoblastic leukaemia
Acute T Cell Lymphocytic Leukemia
HTLV ALL
ATLL
GeneRIF:16079893
DOID:5603
Acute T-Cell Leukemia[accessedResource: NCIt:C3183][accessDate: 04-11-2010]
HTLV-Associated Leukemia-Lymphomas[accessedResource: MSH:D015459][accessDate: 04-11-2010]
T-Cell Leukemia-Lymphomas, Adult[accessedResource: MSH:D015459][accessDate: 04-11-2010]
T-cell acute lymphoblastic leukemia (disorder)[accessedResource: SNOMEDCT:277575008][accessDate: 04-11-2010]
Leukemia, Adult T-Cell[accessedResource: MSH:D015459][accessDate: 04-11-2010]
Precursor T-Lymphoblastic Leukemia
Aggressive T-Cell malignancy with adult onset, caused by HUMAN T-LYMPHOTROPIC VIRUS 1. It is endemic in Japan, the Caribbean basin, Southeastern United States, Hawaii, and parts of Central and South America and sub-Saharan Africa.
GeneRIF:16287841
Adult T-Cell Leukemias[accessedResource: MSH:D015459][accessDate: 04-11-2010]
HTLV-I-Associated T-Cell Leukemia-Lymphoma
T-Cell Leukemias, Adult
Human T Lymphotropic Virus-Associated Leukemia-Lymphoma[accessedResource: MSH:D015459][accessDate: 04-11-2010]
T-cell acute lymphoblastic leukemia
Precursor T-cell lymphoblastic leukaemia[accessedResource: SNOMEDCT:277575008][accessDate: 04-11-2010]
Precursor T-cell lymphoblastic leukemia[accessedResource: SNOMEDCT:277575008][accessDate: 04-11-2010]
T-Cell Leukemia-Lymphoma, Adult[accessedResource: MSH:D015459][accessDate: 04-11-2010]
James Malone
GeneRIF:15827121
Aggressive T-Cell malignancy with adult onset, caused by HUMAN T-LYMPHOTROPIC VIRUS 1. It is endemic in Japan, the Caribbean basin, Southeastern United States, Hawaii, and parts of Central and South America and sub-Saharan Africa.[accessedResource: MSH:D015459][accessDate: 04-11-2010]
GeneRIF:15990867
Tomasz Adamusiak
sensory nervous system primordium
FBbt:00005551
azithromycin
(2R,3S,4R,5R,8R,10R,11R,12S,13S,14R)-2-ethyl-3,4,10-trihydroxy-3,5,6,8,10,12,14-heptamethyl-15-oxo-11-{[3,4,6-trideoxy-3-(dimethylamino)-b-D-xylo-hexopyranosyl]oxy}-1-oxa-6-azacyclopentadecan-13-yl 2,6-dideoxy-3-C-methyl-3-O-methyl-a-L-ribo-hexopyranoside
10760
30760
83905-01-5
C38H72N2O12
AZM
Tomasz Adamusiak
vagal placode 2
ZFA:0001298
2,4-dinitrophenol
2,4-dinitrophenol
20523
51-28-5
523
C6H4N2O5
dinitrophenol; DNP
CNS - Brain - Hippocampus (MMHCC)
CNS - Brain - Hippocampus (MMHCC)[accessedResource: NCIt:C22615][accessDate: 10-05-2010]
NCIt:C22615
Hippocampus[accessedResource: NCIt:C22615][accessDate: 10-05-2010]
true
Hippocampus
Obsolete - term hippocampus already exists
obsolete_CNS brain hippocampus MMHCC
James Malone
true
1.8
class no longer needed for organizational purposes. Also hard to decide what an instance of a cell factor is.
obsolete_cell factor
James Malone
CS57549 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158573&type=germplasm
CS57549
http://www.arabidopsis.org/servlets/TairObject?id=1005158573&type=germplasm
Ele Holloway
James Malone
Tomasz Adamusiak
dexverapamil
CASRN:52-53-9
verapamil
Tomasz Adamusiak
interopercle
ZFA:0000674
James Malone
A role played by a a biological sample in the context of a microarray experiment where the intent is that biological or technical variation is measured.
replicate
James Malone
CS57511 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311932.
CS57511
http://www.arabidopsis.org/servlets/TairObject?type=stock&id=1000311932
butan-1-ol
1740
21740
71-36-3
C4H10O
butan-1-ol
butanol; 1-butanol
Ele Holloway
James Malone
QG56
Tomasz Adamusiak
ILSXISS25/TejJ
http://jaxmice.jax.org/strain/009301.html
James Malone
Familial amyotrophic lateral sclerosis is a amyotrophic lateral sclerosis in which a family history of the disease exists.
familial amyotrophic lateral sclerosis
alpha-adrenergic blockers
alpha-adrenoceptor antagonists
alpha-adrenergic antagonist
alpha-adrenergic receptor blockaders
alpha-adrenergic blocker
http://www.ebi.ac.uk/efo/EFO_0001863
alpha-adrenergic antagonists
James Malone
CHEBI:37890
An agent that binds to but does not activate alpha-adrenergic receptors thereby blocking the actions of endogenous or exogenous alpha-adrenergic agonists. alpha-Adrenergic antagonists are used in the treatment of hypertension, vasospasm, peripheral vascular disease, shock, and pheochromocytoma.
Tomasz Adamusiak
ventral telencephalon
ZFA:0000304
HBL100
James Malone
Sophoricol
4',5,7-trihydroxyisoflavone
James Malone
genistein
InChI=1/C15H10O5/c16-9-3-1-8(2-4-9)11-7-20-13-6-10(17)5-12(18)14(13)15(11)19/h1-7,16-18H
Oc1ccc(cc1)-c1coc2cc(O)cc(O)c2c1=O
Prunetol
C15H10O5
A phytoestrogenic isoflavone with antioxidant properties.
InChIKey=TZBJGXHYKVUXJN-UHFFFAOYAH
CHEBI:28088
5,7-dihydroxy-3-(4-hydroxyphenyl)-4H-chromen-4-one
A hydroxyisoflavone that has formula C15H10O5.
http://www.ebi.ac.uk/efo/EFO_0001542
James Malone
EBC-1
James Malone
GM12146
James Malone
129/Sv is a substrain of the mouse strain 129 as described in Jackson Laboratory http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
129/Sv
http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml
C15H20O4
InChIKey=JLIDBLDQVAYHNE-RGWLVKBGDZ
An apo carotenoid sesquiterpenoid that has formula C15H20O4.
Abscisinsaeure
CC(\\C=C\\C1(O)C(C)=CC(=O)CC1(C)C)=C\\C(O)=O
http://www.ebi.ac.uk/efo/EFO_0001477
acido abscisico
acide abscissique
Abszisinsaeure
InChI=1/C15H20O4/c1-10(7-13(17)18)5-6-15(19)11(2)8-12(16)9-14(15,3)4/h5-8,19H,9H2,1-4H3,(H,17,18)/b6-5+,10-7-/f/h17H
CHEBI:22152
(2Z,4E)-5-(1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl)-3-methylpenta-2,4-dienoic acid
abscisic acid
Tomasz Adamusiak
ILSXISS3/TejJ
http://jaxmice.jax.org/strain/009257.html
James Malone
http://www.ebi.ac.uk/efo/EFO_0001725
true
A time unit which is equal to 12 months which is science is taken to be equal to 365.25 days.
A year is a derived time unit which is equal to 365.25 days.
year
UO:0000036
Ele Holloway
James Malone
Tomasz Adamusiak
epidermal growth factor
CASRN:62229-50-9
DSSTox_Generic_SID:40469
EGF
James Malone
129xC57BL/6 is a substrain of the mouse strain 129 as described in article PUBMED ID 15015938
129xC57BL/6
PUBMED ID: 15015938
Ele Holloway
James Malone
NCI-H2405
A (1->4)-beta-D-glucan compound formed by methylating cellulose through exposure to NaOH/CH3Cl.
CHEBI:53448
(C9H16O5)n
methylcellulose
E461
http://www.ebi.ac.uk/efo/EFO_0002735
InChIKey=LNAZSHAWQACDHT-XIYTZBAFBM
Metilcelulosa
InChI=1/C29H54O16/c1-30-12-15-18(33-4)21(34-5)25(38-9)28(42-15)45-20-17(14-32-3)43-29(26(39-10)23(20)36-7)44-19-16(13-31-2)41-27(40-11)24(37-8)22(19)35-6/h15-29H,12-14H2,1-11H3/t15-,16-,17-,18-,19-,20-,21+,22+,23+,24-,25-,26-,27-,28+,29+/m1/s1
Cellulose methylate
methylated cellulose
Ele Holloway
Methylcellulosum
cellulose methyl ether
Tomasz Adamusiak
methyl cellulose
Plexiform schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
MSH:D009442
Pigmented Schawnnoma
Degenerated Schwannoma
Melanotic schwannoma
Plexiform Schwannomatoses[accessedResource: MSH:D009442][accessDate: 04-11-2010]
Degenerated Schwannoma[accessedResource: NCIt:C6556][accessDate: 04-11-2010]
Neurilemmoma, NOS[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
GeneRIF:15837555
Neurilemoma (morphologic abnormality)
Neurinomas
Neurilemmomas
Plexiform schwannoma
SNOMEDCT:985004
Melanocytic Schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
GeneRIF:13679444
Neurilemomas[accessedResource: MSH:D009442][accessDate: 04-11-2010]
GeneRIF:15850583
Neurinoma
Psammomatous schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
Acoustic neuroma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
Ancient schwannoma (morphologic abnormality)
Pigmented schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
Neurilemmosarcomas
A tumor of the peripheral nervous system composed of neoplastic Schwann cells. The vast majority of schwannomas follow a benign clinical course. Only rare cases associated with a malignant clinical course have been reported.
Melanotic schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
Pigmented Schawnnoma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
A neoplasm that arises from SCHWANN CELLS of the cranial, peripheral, and autonomic nerves. Clinically, these tumors may present as a cranial neuropathy, abdominal or soft tissue mass, intracranial lesion, or with spinal cord compression. Histologically, these tumors are encapsulated, highly vascular, and composed of a homogenous pattern of biphasic fusiform-shaped cells that may have a palisaded appearance (MeSH).
Plexiform Schwannomatosis
Malignant Neurilemoma
Neurilemomas, Malignant
Psammomatous schwannoma
A neoplasm that arises from SCHWANN CELLS of the cranial, peripheral, and autonomic nerves. Clinically, these tumors may present as a cranial neuropathy, abdominal or soft tissue mass, intracranial lesion, or with spinal cord compression. Histologically, these tumors are encapsulated, highly vascular, and composed of a homogenous pattern of biphasic fusiform-shaped cells that may have a palisaded appearance (MeSH).[accessedResource: NIFSTD:birnlex_12603][accessDate: 04-11-2010]
Ancient neurilemmoma
Cellular schwannoma
Ancient Schwannoma[accessedResource: SNOMEDCT:404023006][accessDate: 04-11-2010]
Ancient schwannoma
Neurilemmoma (disorder)[accessedResource: DOID:3192][accessDate: 04-11-2010]
NIFSTD:birnlex_12603
Pigmented schwannoma
Neurilemoma
Acoustic neuroma
NCIt:C6556
NCIt:C3269
Cellular schwannoma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
GeneRIF:12118253
SNOMEDCT:409704009
Schwannomas
Neurilemmoma, NOS
Schwannoma, NOS[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
Ancient neurilemoma[accessedResource: SNOMEDCT:409704009][accessDate: 04-11-2010]
Ancient neurilemoma
Plexiform Schwannomatosis[accessedResource: MSH:D009442][accessDate: 04-11-2010]
schwannoma
Neurilemmosarcomas[accessedResource: MSH:D009442][accessDate: 04-11-2010]
Neurinoma[accessedResource: NCIt:C3269][accessDate: 04-11-2010]
DOID:3192
Neurinomas[accessedResource: MSH:D009442][accessDate: 04-11-2010]
Ancient neurilemmoma[accessedResource: SNOMEDCT:404023006][accessDate: 04-11-2010]
Melanocytic Schwannoma
Neurilemomas
Neurilemmosarcoma
Ancient neurilemmoma (disorder)
A tumor of the peripheral nervous system composed of neoplastic Schwann cells. The vast majority of schwannomas follow a benign clinical course. Only rare cases associated with a malignant clinical course have been reported.[accessedResource: NCIt:C3269][accessDate: 04-11-2010]
Degenerated Neurilemmoma
Ancient neurilemmoma (disorder)[accessedResource: SNOMEDCT:404023006][accessDate: 04-11-2010]
James Malone
Neurilemmomas[accessedResource: MSH:D009442][accessDate: 04-11-2010]
Schwannoma, NOS
Ancient schwannoma (morphologic abnormality)[accessedResource: SNOMEDCT:409704009][accessDate: 04-11-2010]
A neoplasm that arises from SCHWANN CELLS of the cranial, peripheral, and autonomic nerves. Clinically, these tumors may present as a cranial neuropathy, abdominal or soft tissue mass, intracranial lesion, or with spinal cord compression. Histologically, these tumors are encapsulated, highly vascular, and composed of a homogenous pattern of biphasic fusiform-shaped cells that may have a palisaded appearance. (From DeVita Jr et al., Cancer: Principles and Practice of Oncology, 5th ed, pp964-5)
Neurilemmoma[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
Plexiform Schwannomatoses
GeneRIF:14612918
Degenerated Neurilemmoma[accessedResource: NCIt:C6556][accessDate: 04-11-2010]
Neurilemmoma (disorder)
GeneRIF:12665675
SNOMEDCT:404022001
GeneRIF:12444102
Schwannomas[accessedResource: MSH:D009442][accessDate: 04-11-2010]
Neurilemoma (morphologic abnormality)[accessedResource: SNOMEDCT:985004][accessDate: 04-11-2010]
Neurilemmosarcoma[accessedResource: NIFSTD:birnlex_12603][accessDate: 04-11-2010]
Malignant Neurilemoma[accessedResource: MSH:D009442][accessDate: 04-11-2010]
Neurilemomas, Malignant[accessedResource: MSH:D009442][accessDate: 04-11-2010]
A neoplasm that arises from SCHWANN CELLS of the cranial, peripheral, and autonomic nerves. Clinically, these tumors may present as a cranial neuropathy, abdominal or soft tissue mass, intracranial lesion, or with spinal cord compression. Histologically, these tumors are encapsulated, highly vascular, and composed of a homogenous pattern of biphasic fusiform-shaped cells that may have a palisaded appearance. (From DeVita Jr et al., Cancer: Principles and Practice of Oncology, 5th ed, pp964-5)[accessedResource: MSH:D009442][accessDate: 04-11-2010]
GeneRIF:14566860
Neurilemoma[accessedResource: SNOMEDCT:404022001][accessDate: 04-11-2010]
SNOMEDCT:404023006
Tomasz Adamusiak
Neurilemmoma
locus ceruleus
James Malone
locus cinereus
locus ceruleus[accessedResource: BTO:0001408][accessDate: 04-11-2010]
locus coeruleus
locus caeruleus
BTO:0001408
locus cinereus[accessedResource: BTO:0001408][accessDate: 04-11-2010]
locus caeruleus[accessedResource: BTO:0001408][accessDate: 04-11-2010]
Ele Holloway
James Malone
Natural Language Generator 8th April 2010
A SCN2.2 is a cell line.
A SCN2.2 is both something that derives from a rattus norvegicus, and something that derives from a
suprachiasmatic nucleus.
SCN2.2
sodium selenite
10102-18-8
12077
32077
Na2O3Se
disodium selenite
An acute viral infection of the respiratory tract, occurring in isolated cases, in epidemics, or in pandemics; it is caused by serologically different strains of viruses (influenzaviruses) designated A, B, and C, has a 3-day incubation period, and usually lasts for 3 to 10 days. It is marked by inflammation of the nasal mucosa, pharynx, and conjunctiva; headache; myalgia; often fever, chills, and prostration; and occasionally involvement of the myocardium or central nervous system.[accessedResource: NCIt:C53482][accessDate: 04-11-2010]
James Malone
An acute viral infection of the respiratory tract, occurring in isolated cases, in epidemics, or in pandemics; it is caused by serologically different strains of viruses (influenzaviruses) designated A, B, and C, has a 3-day incubation period, and usually lasts for 3 to 10 days. It is marked by inflammation of the nasal mucosa, pharynx, and conjunctiva; headache; myalgia; often fever, chills, and prostration; and occasionally involvement of the myocardium or central nervous system.
influenza
NCIt:C53482
hypodermis[accessedResource: MAT:0000154][accessDate: 04-11-2010]
A cellular, multilayered epithelium derived from the ectoderm. Zebrafish epidermis consists only of living cells unlike terrestrial vertebrates in which dead, keratinized cells are present.
FMAID:70596
A cellular, multilayered epithelium derived from the ectoderm. Zebrafish epidermis consists only of living cells unlike terrestrial vertebrates in which dead, keratinized cells are present.[accessedResource: ZFA:0000105][accessDate: 04-11-2010]
adult epidermis[accessedResource: FBbt:00005401][accessDate: 04-11-2010]
MA:0000153
WBbt:0005733
EMAPA:17528
MAT:0000154
The outer epithelial layer of the external integument of the animal body that is derived from the embryonic epiblast; specifically: the outer nonsensitive and nonvascular layer of the skin of a vertebrate that overlies the dermis.
adult epidermis
James Malone
hypodermis
FBbt:00005401
BTO:0000404
epidermis
AAO:0000143
ZFA:0000105
EV:0100153
SAEL:35
TADS:0000109
The outer epithelial layer of the external integument of the animal body that is derived from the embryonic epiblast; specifically: the outer nonsensitive and nonvascular layer of the skin of a vertebrate that overlies the dermis.[accessedResource: BTO:0000404][accessDate: 04-11-2010]
Tomasz Adamusiak
ILSXISS86/TejJ
http://jaxmice.jax.org/strain/009280.html
Ele Holloway
James Malone
benign insulitis
James Malone
HCC461
CHEBI:26158
James Malone
http://www.ebi.ac.uk/efo/EFO_0001829
phytohormone
James Malone
MDAMB175VII
James Malone
Knock in expression is a process in which a gene is replaced by an altered version of the same gene using homologous recombination resulting in a gain of function.
knock in expression
carbon tetrachloride
56-23-5
carbaryl
20247
247
63-25-2
C12H11NO2
naphthalen-1-yl methylcarbamate
Ele Holloway
James Malone
SW982
Tomasz Adamusiak
mandibular lateral line neuromast
ZFA:0000125
James Malone
CS57904 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158928&type=germplasm
CS57904
http://www.arabidopsis.org/servlets/TairObject?id=1005158928&type=germplasm
James Malone
true
2.1
duplicate with EFO_0002786
obsolete_GM12892
Tomasz Adamusiak
pronephric mesoderm
ZFA:0000067
syncytiotrophoblast cell
syntrophoblast
syncytial trophoblast[accessedResource: CL:0000525][accessDate: 04-11-2010]
A cell from the outer syncytial layer of the trophoblast of an early mammalian embryo. It It secretes hCG in order to maintain progesterone secretion and sustain a pregnancy.[accessedResource: CL:0000525][accessDate: 04-11-2010]
CL:0000525
A cell from the outer syncytial layer of the trophoblast of an early mammalian embryo. It It secretes hCG in order to maintain progesterone secretion and sustain a pregnancy.
plasmidotrophoblast
plasmidotrophoblast[accessedResource: CL:0000525][accessDate: 04-11-2010]
syncytial trophoblast
Tomasz Adamusiak
syntrophoblast[accessedResource: CL:0000525][accessDate: 04-11-2010]
nilotinib
22663
4-methyl-N-[3-(4-methyl-1H-imidazol-1-yl)-5-(trifluoromethyl)phenyl]-3-[(4-pyridin-3-ylpyrimidin-2-yl)amino]benzamide
42663
64157-10-0
C28H22F3N7O
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mg[accessedResource: MO_949][accessDate: 04-11-2010]
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mg
A milligram is a mass unit which is equal to one-millionth of a kilogram.
milligram
true
James Malone
mg
http://www.ebi.ac.uk/efo/EFO_0001706
Tomasz Adamusiak
A mass unit which is equal to one thousandth of a gram or 10^[-3] g.
MO_949
Pima[accessedResource: NCIt:C44085][accessDate: 04-11-2010]
Tomasz Adamusiak
Pima Indian
NCIt:C44085
Pima
Ele Holloway
James Malone
EB1
Disorder of nutrition[accessedResource: SNOMEDCT:2492009][accessDate: 04-11-2010]
Nutritional disease, NOS[accessedResource: SNOMEDCT:2492009][accessDate: 04-11-2010]
Nutritional disorder, NOS[accessedResource: SNOMEDCT:2492009][accessDate: 04-11-2010]
James Malone
DOID:374
Nutritional disorder, NOS
Malnutrition[accessedResource: SNOMEDCT:2492009][accessDate: 04-11-2010]
NCIt:C26836
NUTRITION DIS[accessedResource: MSH:D009748][accessDate: 04-11-2010]
Nutritional disease, NOS
Nutritional Disorders[accessedResource: MSH:D009748][accessDate: 04-11-2010]
Nutrition Disorder[accessedResource: MSH:D009748][accessDate: 04-11-2010]
Disorders caused by nutritional imbalance, either overnutrition or undernutrition.[accessedResource: MSH:D009748][accessDate: 04-11-2010]
Malnutrition
Nutritional disease[accessedResource: SNOMEDCT:2492009][accessDate: 04-11-2010]
MSH:D009748
nutritional disorder
Nutritional disorder (disorder)[accessedResource: DOID:374][accessDate: 04-11-2010]
Disorders caused by nutritional imbalance, either overnutrition or undernutrition.
Nutritional disease
Nutrition Disorders[accessedResource: MSH:D009748][accessDate: 04-11-2010]
NUTRITIONAL DIS[accessedResource: MSH:D009748][accessDate: 04-11-2010]
Nutrition Disorders
Disorder of nutrition
Nutritional disorder (disorder)
NUTRITION DIS
Nutrition disorder
NUTRITIONAL DIS
Nutritional Disorders
SNOMEDCT:2492009
proximal portion of right coronary artery
Jie Zheng
Anterior segment of right coronary artery
Anterior segment of right coronary artery[accessedResource: FMAID:3804][accessDate: 04-11-2010]
First segment of right coronary artery
FMAID:3804
Tomasz Adamusiak
First segment of right coronary artery[accessedResource: FMAID:3804][accessDate: 04-11-2010]
saline
Small but distinctive epithelial sac containing fluid, located midventrally posterior to the yolk cell or its extension, and transiently present during most of the segmentation period. Kupffer's vesicle has been compared to the mouse embryonic node.[accessedResource: ZFA:0000001][accessDate: 04-11-2010]
one-cell stage
MFO:0005280
Kupffer's vesicle
Tomasz Adamusiak
zygote[accessedResource: CL:0000365][accessDate: 04-11-2010]
Zygote:1-cell[accessedResource: ZFS:0000001][accessDate: 04-11-2010]
Zygote:1-cell
EMAPA:16033
MAT:0000074
Diploid cell produced by the fusion of sperm cell nucleus and egg cell.
EVM:2990001
ZFS:0000001
James Malone
ZFA:0000001
Diploid cell produced by the fusion of sperm cell nucleus and egg cell.[accessedResource: CL:0000365][accessDate: 04-11-2010]
XAO:0000035
FBdv:00005288
zygote
EHDAA:27
CL:0000365
one-cell stage[accessedResource: MAT:0000074][accessDate: 04-11-2010]
Kupffer's vesicle[accessedResource: ZFA:0000001][accessDate: 04-11-2010]
Small but distinctive epithelial sac containing fluid, located midventrally posterior to the yolk cell or its extension, and transiently present during most of the segmentation period. Kupffer's vesicle has been compared to the mouse embryonic node.
fertilized egg stage
Helen Parkinson
breast fibrocystic disease is a benign mammary displasia characterised by breast discomfort and 'lumpiness'
breast fibrocystic disease
diffuse cystic mastopathy
fibrocystic disease of breast
Ele Holloway
James Malone
MOLT16
ICD9:207.0
DOID:1239
ACT ERTH/ERYLK W/O RMSON
acute erythremia and erythroleukemia[accessedResource: DOID:1239][accessDate: 04-11-2010]
acute erythroid leukemia
acute erythroleukemia
acute erythremia and erythroleukemia
Acute erythremia and erythroleukemia without mention of remission
ICD9:207.00
James Malone
ACT ERTH/ERYLK W/O RMSON[accessedResource: ICD9:207.00][accessDate: 04-11-2010]
Acute erythremia and erythroleukemia without mention of remission[accessedResource: ICD9:207.00][accessDate: 04-11-2010]
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#heating_block[accessedResource: MO_663][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0002017
A heating block is an instrument or part of an instrument which raises or maintains the temperature of a sample to a defined constant temperature during certain parts of an assay
heating block
MO_663
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#heating_block
polychlorinated biphenyls
40591
PCBs
BTO:0000222
An embryonic cell that becomes a cell of muscle fiber.
CL:0000056
myoblast
James Malone
An embryonic (precursor) cell of the myogenic lineage that develops from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes.[accessedResource: CL:0000056][accessDate: 04-11-2010]
An embryonic (precursor) cell of the myogenic lineage that develops from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes.
sarcoblast
An embryonic cell that becomes a cell of muscle fiber.[accessedResource: BTO:0000222][accessDate: 04-11-2010]
sarcoblast[accessedResource: BTO:0000222][accessDate: 04-11-2010]
A class of large neuroglial (macroglial) cells in the central nervous system. Oligodendroglia may be called interfascicular, perivascular, or perineuronal (not the same as satellite cells, perineuronal of ganglia) according to their location. They form the insulating myelin sheath of axons in the central nervous system (MSH).[accessedResource: NIFSTD:sao844118448][accessDate: 04-11-2010]
oligodendroglia
CL:0000128
NIFSTD:sao844118448
A class of large neuroglial (macroglial) cells in the central nervous system. Oligodendroglia may be called interfascicular, perivascular, or perineuronal (not the same as satellite cells, perineuronal of ganglia) according to their location. They form the insulating myelin sheath of axons in the central nervous system (MSH).
oligodendrocyte
A class of large neuroglial (macroglial) cells in the central nervous system. Form the insulating myelin sheath of axons in the central nervous system.
oligodendroglia[accessedResource: CL:0000128][accessDate: 04-11-2010]
Tomasz Adamusiak
A class of large neuroglial (macroglial) cells in the central nervous system. Form the insulating myelin sheath of axons in the central nervous system.[accessedResource: CL:0000128][accessDate: 04-11-2010]
James Malone
Tomasz Adamusiak
muscle precursor cell
A precursor is a tissue modifier describing a substance, cell, or cellular component from which another substance, cell, or cellular component is formed. For example, muscle precursor cell.
precursor
MAT:0000481
NIFSTD:sao2146594471
[D]Elevated blood glucose level
GeneRIF:15033467
GeneRIF:15677479
Abnormally high BLOOD GLUCOSE level after a meal.
GeneRIF:12963802
GeneRIF:15259033
MSH:D006943
GeneRIF:15501243
GeneRIF:11959624
GeneRIF:15920055
GeneRIF:15561908
SNOMEDCT:80394007
GeneRIF:14984315
GeneRIF:12482638
Hyperglycemias
GeneRIF:12522068
GeneRIF:14673082
Hyperglycemias[accessedResource: MSH:D006943][accessDate: 04-11-2010]
GeneRIF:15191885
hyperglycemia (context-dependent category)[accessedResource: DOID:4195][accessDate: 04-11-2010]
GeneRIF:15148392
Abnormally high BLOOD GLUCOSE level.
GeneRIF:12376320
GeneRIF:12645629
Hyperglycemia, NOS
Hyperglycemia, Postprandial
GeneRIF:12464674
GeneRIF:12655575
GeneRIF:12759458
GeneRIF:15899957
GeneRIF:15985479
GeneRIF:14751239
[D]Hyperglycemia (situation)
GeneRIF:14534319
GeneRIF:14578285
Postprandial Hyperglycemias
GeneRIF:12765965
Hyperglycemia, NOS[accessedResource: SNOMEDCT:80394007][accessDate: 04-11-2010]
Hyperglycaemia[accessedResource: SNOMEDCT:80394007][accessDate: 04-11-2010]
GeneRIF:14514642
Abnormally high BLOOD GLUCOSE level.[accessedResource: MSH:D006943][accessDate: 04-11-2010]
Hyperglycaemia
GeneRIF:14698990
GeneRIF:16301823
hyperglycemia (disorder)
GeneRIF:12196481
GeneRIF:15486815
Hyperglycemia, Postprandial[accessedResource: MSH:D006943][accessDate: 04-11-2010]
Hyperglycaemia, NOS[accessedResource: SNOMEDCT:80394007][accessDate: 04-11-2010]
GeneRIF:15010337
GeneRIF:15855318
[D]Hyperglycemia[accessedResource: SNOMEDCT:315299009][accessDate: 04-11-2010]
hyperglycemia (disorder)[accessedResource: DOID:4195][accessDate: 04-11-2010]
[D]Hyperglycaemia[accessedResource: SNOMEDCT:315299009][accessDate: 04-11-2010]
GeneRIF:12149242
GeneRIF:15993383
[D]Hyperglycaemia
GeneRIF:15899886
Hyperglycemias, Postprandial[accessedResource: MSH:D006943][accessDate: 04-11-2010]
GeneRIF:14678947
[D]Elevated blood glucose level[accessedResource: SNOMEDCT:315299009][accessDate: 04-11-2010]
GeneRIF:12137596
GeneRIF:15868137
GeneRIF:12107734
Abnormally high BLOOD GLUCOSE level after a meal.[accessedResource: MSH:D006943][accessDate: 04-11-2010]
DOID:4195
[D]Hyperglycemia
GeneRIF:15561954
GeneRIF:15845625
hyperglycemia (context-dependent category)
GeneRIF:12736712
[D]Hyperglycemia (situation)[accessedResource: SNOMEDCT:315299009][accessDate: 04-11-2010]
GeneRIF:15277392
James Malone
GeneRIF:15956778
GeneRIF:15616014
hyperglycemia
GeneRIF:15662550
GeneRIF:12860835
[D]Hyperglycemia (context-dependent category)
GeneRIF:12453975
Hyperglycaemia, NOS
SNOMEDCT:315299009
GeneRIF:15848159
GeneRIF:12819007
GeneRIF:14749287
[D]Hyperglycemia (context-dependent category)[accessedResource: SNOMEDCT:315299009][accessDate: 04-11-2010]
Bilaterally paired neuropil structure situated postero-dorsally in the protocerebrum that functions in olfactory associative learning and memory. The mushroom body is divided into: the calyx, which is closest to the cortex and receives sensory interneuron afferents; the pedunculus, which is a thick axon bundle extending from the calyx to the base of the lobes; the mushroom body lobe system, which consists of a vertical branch composed of two intertwined lobes (alpha and alpha') and a medial branch consisting of three parallel lobes (beta, beta' and gamma).[accessedResource: FBbt:00005801][accessDate: 04-11-2010]
FBbt:00005801
BTO:0002675
corpora pedunculata
MAT:0000336
Paired neuropil structure, situated postero-dorsally in the protocerebrum, which are thought to be crucial to olfactory associative learning and memory. Mushroom bodies are divided into: the calyx, closest to the cortex, which receives sensory interneuron afferents; a thick axon bundle called the pedunculus, which extends from the calyx to the base of the lobes; the mushroom body lobe system consisting of a vertical branch composed of two intertwined lobes (alpha and alpha') and a medial branch consisting of three parallel lobes (beta, beta' and gamma).
mushroom body
James Malone
Paired neuropil structure situated postero-dorsally in the protocerebrum, which are thought to be crucial to olfactory associative learning and memory. The mushroom body is divided into: the calyx, which is closest to the cortex and receives sensory interneuron afferents; the pedunculus, which is a thick axon bundle extending from the calyx to the base of the lobes; the mushroom body lobe system, which consists of a vertical branch composed of two intertwined lobes (alpha and alpha') and a medial branch consisting of three parallel lobes (beta, beta' and gamma).
The Drosophila mushroom bodies (MBs), paired brain structures composed of vertical and medial lobes, achieve their final organization at metamorphosis.[accessedResource: BTO:0002675][accessDate: 04-11-2010]
corpora pedunculata[accessedResource: FBbt:00005801][accessDate: 04-11-2010]
The Drosophila mushroom bodies (MBs), paired brain structures composed of vertical and medial lobes, achieve their final organization at metamorphosis.
Bilaterally paired neuropil structure situated postero-dorsally in the protocerebrum that functions in olfactory associative learning and memory. The mushroom body is divided into: the calyx, which is closest to the cortex and receives sensory interneuron afferents; the pedunculus, which is a thick axon bundle extending from the calyx to the base of the lobes; the mushroom body lobe system, which consists of a vertical branch composed of two intertwined lobes (alpha and alpha') and a medial branch consisting of three parallel lobes (beta, beta' and gamma).
A recessive X-linked defect of leukocyte function in which phagocytic cells ingest but fail to digest bacteria, resulting in recurring bacterial infections with granuloma formation.
GeneRIF:15777347
chronic granulomatous disease
GeneRIF:12817011
Congenital dysphagocytosis (disorder)
GRANULOMATOUS DIS CHRONIC
Congenital dysphagocytosis
GRANULOMATOUS DIS CHRONIC[accessedResource: MSH:D006105][accessDate: 04-11-2010]
Chronic granulomatous disease (disorder)
A recessive X-linked defect of leukocyte function in which phagocytic cells ingest but fail to digest bacteria, resulting in recurring bacterial infections with granuloma formation.[accessedResource: MSH:D006105][accessDate: 04-11-2010]
GeneRIF:12073015
Congenital dysphagocytosis (disorder)[accessedResource: SNOMEDCT:191352003][accessDate: 04-11-2010]
James Malone
GeneRIF:12589359
CGD - Chronic granulomatous disease[accessedResource: SNOMEDCT:387759001][accessDate: 04-11-2010]
Granulomatous Diseases, Chronic[accessedResource: MSH:D006105][accessDate: 04-11-2010]
GeneRIF:16138344
NCIt:C26788
CGD[accessedResource: DOID:3265][accessDate: 04-11-2010]
SNOMEDCT:191352003
SNOMEDCT:387759001
GeneRIF:11462241
CGD - Chronic granulomatous disease
DOID:3265
GeneRIF:12213046
Granulomatous Diseases, Chronic
CGD
GeneRIF:15507755
Chronic granulomatous disease (disorder)[accessedResource: SNOMEDCT:387759001][accessDate: 04-11-2010]
Congenital dysphagocytosis[accessedResource: SNOMEDCT:191352003][accessDate: 04-11-2010]
MSH:D006105
Ele Holloway
James Malone
SQ-5
Tomasz Adamusiak
maxillary sensory complex primordium
FBbt:00005544
Ele Holloway
James Malone
Tomasz Adamusiak
interleukin-2
CASRN:102524-44-7
DSSTox_Generic_SID:40516
IL-2
Ele Holloway
James Malone
A673
Invasive Lobular carcinoma of breast[accessedResource: DOID:3460][accessDate: 04-11-2010]
Classic Invasive Lobular Carcinoma[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
Invasive Lobular Adenocarcinoma[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
An infiltrating lobular adenocarcinoma. The malignant cells lack cohesion and are arranged individually or in a linear manner (Indian files), or as narrow trabeculae within the stroma. The malignant cells are usually smaller than those of ductal carcinoma, are less pleomorphic, and have fewer mitotic figures.[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
Invasive Lobular Carcinoma, Classic Type
Invasive Lobular Carcinoma of the Breast
Infiltrating Lobular Breast Carcinoma
Infiltrating Lobular Carcinoma of the Breast[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
DOID:3460
Infiltrating Lobular Carcinoma of Breast
infiltrating lobular carcinoma
Infiltrating Lobular Carcinoma of the Breast
Infiltrating Lobular Carcinoma of Breast[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
Invasive Lobular Carcinoma, Classic Type[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
Invasive Lobular Breast Carcinoma[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
James Malone
NCIt:C7950
An infiltrating lobular adenocarcinoma. The malignant cells lack cohesion and are arranged individually or in a linear manner (Indian files), or as narrow trabeculae within the stroma. The malignant cells are usually smaller than those of ductal carcinoma, are less pleomorphic, and have fewer mitotic figures.
Classic Invasive Lobular Carcinoma
Invasive Lobular Adenocarcinoma
Invasive Lobular Breast Carcinoma
Infiltrating Lobular Adenocarcinoma[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
Infiltrating Lobular Adenocarcinoma
Invasive Lobular Carcinoma of the Breast[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
invasive lobular carcinoma
Invasive Lobular Carcinoma of Breast
Infiltrating Lobular Breast Carcinoma[accessedResource: NCIt:C7950][accessDate: 04-11-2010]
XAO:0000128
TADS:0000172
stomach
EV:0100070
SAEL:102
EHDAA:2993
BTO:0001307
A flask-shaped posterior region, which retains the blood meal, and which in culicines is capable of much distension.[accessedResource: TGMA:0001041][accessDate: 04-11-2010]
James Malone
A dilatation of the alimentary canal of a vertebrate communicating anteriorly with the esophagus and posteriorly with the duodenum.
AAO:0000579
A flask-shaped posterior region, which retains the blood meal, and which in culicines is capable of much distension.
MA:00000353
adult stomach[accessedResource: TGMA:0001041][accessDate: 04-11-2010]
gaster[accessedResource: BTO:0001307][accessDate: 04-11-2010]
TGMA:0001041
FMAID:7148
MFO:0003120
A dilatation of the alimentary canal of a vertebrate communicating anteriorly with the esophagus and posteriorly with the duodenum.[accessedResource: BTO:0001307][accessDate: 04-11-2010]
gaster
Organ with organ cavity which is continuous proximally with the esophagus and distally with the small intestine. Examples: There is only one stomach.
MAT:0000051
adult stomach
EMAPA:17021
James Malone
BY5251
GeneRIF:12622777
DMI UNSPF UNCNTRLD
GeneRIF:16054858
Diabetes mellitus type I [insulin dependent type] [IDDM] [juvenile type], uncontrolled, with unspecified complication[accessedResource: ICD9:250.93][accessDate: 04-11-2010]
GeneRIF:15189740
Insulin Dependent Diabetes[accessedResource: NCIt:C2986][accessDate: 04-11-2010]
Type I Diabetes[accessedResource: NCIt:C2986][accessDate: 04-11-2010]
GeneRIF:12185534
GeneRIF:11916171
Insulin dependent diabetes mellitus
Juvenile Diabetes[accessedResource: NCIt:C2986][accessDate: 04-11-2010]
ICD9:250.93
GeneRIF:12788886
GeneRIF:12107733
DMI UNSPF UNCNTRLD[accessedResource: ICD9:250.93][accessDate: 04-11-2010]
GeneRIF:11943852
DOID:9744
GeneRIF:15950078
GeneRIF:12743700
GeneRIF:11975985
Type 1 Diabetes
Insulin Dependent Diabetes
GeneRIF:11981430
Diabetes mellitus type 1 (disorder)[accessedResource: SNOMEDCT:46635009][accessDate: 04-11-2010]
Type 1 Diabetes[accessedResource: NCIt:C2986][accessDate: 04-11-2010]
GeneRIF:12874455
GeneRIF:12351486
GeneRIF:12663624
GeneRIF:14614560
Juvenile onset diabetes mellitus
GeneRIF:12187923
Juvenile Diabetes
IDDM - Insulin-dependent diabetes mellitus
GeneRIF:14563018
Type I Diabetes
GeneRIF:12189440
GeneRIF:12819903
GeneRIF:14633852
GeneRIF:12878786
GeneRIF:12479587
DMI UNSPF NT ST UNCNTRLD[accessedResource: ICD9:250.91][accessDate: 04-11-2010]
Type 1 diabetes mellitus[accessedResource: SNOMEDCT:46635009][accessDate: 04-11-2010]
IDDM[accessedResource: SNOMEDCT:46635009][accessDate: 04-11-2010]
GeneRIF:12118252
GeneRIF:12021142
NCIt:C2986
GeneRIF:12200073
Diabetes mellitus characterized by insulin deficiency, sudden onset, severe hyperglycemia, rapid progression to ketoacidosis, and death unless treated with insulin. The disease may occur at any age, but is most common in childhood or adolescence.[accessedResource: NCIt:C2986][accessDate: 04-11-2010]
Diabetes mellitus type 1 (disorder)
GeneRIF:12187924
GeneRIF:14557453
GeneRIF:12083814
type I diabetes mellitus
GeneRIF:11286636
GeneRIF:15483661
IDDM - Insulin-dependent diabetes mellitus[accessedResource: SNOMEDCT:46635009][accessDate: 04-11-2010]
Insulin dependent diabetes mellitus[accessedResource: SNOMEDCT:46635009][accessDate: 04-11-2010]
GeneRIF:12351483
GeneRIF:12221281
GeneRIF:14583186
James Malone
GeneRIF:12039523
SNOMEDCT:46635009
IDDM
GeneRIF:12004163
GeneRIF:11845233
GeneRIF:12086959
Diabetes mellitus type I [insulin dependent type] [IDDM] [juvenile type], not stated as uncontrolled, with unspecified complication[accessedResource: ICD9:250.91][accessDate: 04-11-2010]
Juvenile onset diabetes mellitus[accessedResource: SNOMEDCT:46635009][accessDate: 04-11-2010]
GeneRIF:14962949
GeneRIF:12951629
DMI UNSPF NT ST UNCNTRLD
Diabetes Mellitus, Type 1
GeneRIF:12021143
GeneRIF:15786423
ICD9:250.91
GeneRIF:11914751
GeneRIF:11916169
GeneRIF:11466400
GeneRIF:12457456
Diabetes mellitus type I [insulin dependent type] [IDDM] [juvenile type], uncontrolled, with unspecified complication
GeneRIF:12153746
Diabetes mellitus type I [insulin dependent type] [IDDM] [juvenile type], not stated as uncontrolled, with unspecified complication
GeneRIF:15208781
Diabetes mellitus characterized by insulin deficiency, sudden onset, severe hyperglycemia, rapid progression to ketoacidosis, and death unless treated with insulin. The disease may occur at any age, but is most common in childhood or adolescence.
GeneRIF:15928253
GeneRIF:11841494
GeneRIF:12021138
GeneRIF:12381897
InChIKey=LEONUFNNVUYDNQ-UHFFFAOYAR
CHEBI:27698
A vanadium group element that has formula V.
[V]
Vanadium
A vanadium group element atom that has formula V.
http://www.ebi.ac.uk/efo/EFO_0001635
23V
InChI=1/V
vanadio
James Malone
vanadium atom
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#centrifuge[accessedResource: MO_476][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0002013
A centrifuge is an instrument, generally driven by a motor, that puts an object in rotation around a fixed axis, applying force perpendicular to the axis. The centrifuge works using the sedimentation principle, where the centripetal acceleration is used to separate substances of greater and lesser density.
centrifuge
MO_476
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#centrifuge
Ele Holloway
James Malone
OE21
A unit of molarity which is equal to one thousandth of a molar or 10^[-3] M.
Jie Zheng
true
James Malone
mM
A millimolar is a unit of molarity which is equal to one thousandth of a molar or 10^-3 M.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mM[accessedResource: MO_509][accessDate: 04-11-2010]
Tomasz Adamusiak
millimolar
http://www.ebi.ac.uk/efo/EFO_0001806
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mM
MO_509
Tomasz Adamusiak
ILSXISS26/TejJ
http://jaxmice.jax.org/strain/009302.html
STRUCTURE_ChemicalName_IUPAC:2,3-disulfanylpropan-1-ol
(RS)-2,3-disulfanylpropan-1-ol
dimercaprol
Tomasz Adamusiak
Ele Holloway
DSSTox_CID:20461
CASRN:59-52-9
DSSTox_Generic_SID:40461
STRUCTURE_Formula:C3H8OS2
James Malone
Pneumonia (disorder) [Ambiguous][accessedResource: DOID:552][accessDate: 04-11-2010]
pneumonia with infectious disease[accessedResource: DOID:552][accessDate: 04-11-2010]
Pneumonia NOS[accessedResource: DOID:552][accessDate: 04-11-2010]
A lung disease that involves lung parenchyma or alveolar inflammation and abnormal alveolar filling with fluid (consolidation and exudation). It results from a variety of causes including infection with bacteria, viruses, fungi or parasites, and chemical or physical injury to the lungs. It is accompanied by fever, chills, cough, and difficulty in breathing.
Pneumonia (disorder)
Pneumonia due to other specified organisms (disorder)
Pneumonia NOS (disorder)[accessedResource: DOID:552][accessDate: 04-11-2010]
acute pneumonia
pneumonia
Pneumonia due to other specified organisms[accessedResource: DOID:552][accessDate: 04-11-2010]
chest infection due to pneumonia
Pneumonia due to other specified organisms
Pneumonia due to other specified organism[accessedResource: DOID:552][accessDate: 04-11-2010]
Pneumonia NOS
Pneumonitis (disorder)
Pneumonia due to other specified organism
Pneumonitis
Pneumonia (disorder) [Ambiguous]
Pneumonia due to other specified organisms (disorder)[accessedResource: DOID:552][accessDate: 04-11-2010]
Pneumonia (disorder)[accessedResource: DOID:552][accessDate: 04-11-2010]
pneumonitis[accessedResource: DOID:552][accessDate: 04-11-2010]
Tomasz Adamusiak
Pneumonia NOS (disorder)
Pneumonitis (disorder)[accessedResource: DOID:552][accessDate: 04-11-2010]
chest infection due to pneumonia[accessedResource: DOID:552][accessDate: 04-11-2010]
DOID:552
pneumonia with infectious disease
acute pneumonia[accessedResource: DOID:552][accessDate: 04-11-2010]
A lung disease that involves lung parenchyma or alveolar inflammation and abnormal alveolar filling with fluid (consolidation and exudation). It results from a variety of causes including infection with bacteria, viruses, fungi or parasites, and chemical or physical injury to the lungs. It is accompanied by fever, chills, cough, and difficulty in breathing.[accessedResource: DOID:552][accessDate: 04-11-2010]
insulin sensitizers
glitazones
James Malone
glitazonas
glitazone drug
insulin-sensitizing drug
tiazolidinedionas
http://www.ebi.ac.uk/efo/EFO_0001839
An agent which overcomes insulin resistance by activation of the peroxisome proliferator activated receptor gamma (PPAR-gamma).
thiazolidinediones
CHEBI:50864
Ele Holloway
A cell line derived from a human patient with Philadelphia chromosome negative myeloproliferative disorder, after transformation to acute myelomonoblastic leukemia.http://www.ncbi.nlm.nih.gov/pubmed/6296552
GDM 1
James Malone
GDM1
James Malone
BT483
Ele Holloway
James Malone
neurointermediate lobe
Ele Holloway
James Malone
HCT15
HCT-15
stigma
GRO:0005433
James Malone
MAT:0000524
The usually apical part of the pistil of a flower which receives the pollen grains and on which they germinate.
BTO:0001303
The usually apical part of the pistil of a flower which receives the pollen grains and on which they germinate.[accessedResource: BTO:0001303][accessDate: 04-11-2010]
GRO:0005433[accessedResource: BTO:0001303][accessDate: 04-11-2010]
PO:0009073
FBbt:00000052
Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[accessedResource: TAO:0001105][accessDate: 04-11-2010]
embryonic structure
animal developmental tissue
TAO:0001105
.[accessedResource: FBbt:00000052][accessDate: 04-11-2010]
embryo
.
James Malone
Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.
embryonic structure[accessedResource: TAO:0001105][accessDate: 04-11-2010]
embryo[accessedResource: FBbt:00000052][accessDate: 04-11-2010]
use EFO_0000517
true
CL:0000243
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Form the myelin insulation of nervous pathways, guide neuronal migration during development, and exchange metabolites with neurons. Neuroglia have high-affinity transmitter uptake systems, voltage-dependent and transmitter-gated ion channels, and can release transmitters, but their role in signaling (as in many other functions) is unclear.[accessedResource: CL:0000243][accessDate: 10-05-2010]
James Malone
A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Form the myelin insulation of nervous pathways, guide neuronal migration during development, and exchange metabolites with neurons. Neuroglia have high-affinity transmitter uptake systems, voltage-dependent and transmitter-gated ion channels, and can release transmitters, but their role in signaling (as in many other functions) is unclear.
1.9
obsolete_glial cell (sensu Vertebrata)
Most generally any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region as contrasted with projection neurons which have axons projecting to other brain regions.[accessedResource: CL:0000099][accessDate: 04-11-2010]
James Malone
Most generally any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region as contrasted with projection neurons which have axons projecting to other brain regions.
interneuron
CL:0000099
GABAergic interneuron
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#species_design[accessedResource: MO_675][accessDate: 04-11-2010]
Tomasz Adamusiak
species design
MO_675
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#species_design
James Malone
CS57886 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158910&type=germplasm
CS57886
http://www.arabidopsis.org/servlets/TairObject?id=1005158910&type=germplasm
candesartan
139481-59-7
2-(ethyloxy)-1-{[2'-(1H-tetrazol-5-yl)biphenyl-4-yl]methyl}-1H-benzimidazole-7-carboxylic acid
22725
2725
C24H20N6O3
Tomasz Adamusiak
anterior lateral line nerve
ZFA:0000425
James Malone
An assay in which a microRNA array is used to analyse the microRNA component of the transcriptome.
microRNA profiling by array
ArrayExpress production team
InChIKey=RWSXRVCMGQZWBV-VSCBVDDUDG
glutathione
InChI=1/C10H17N3O6S/c11-5(10(18)19)1-2-7(14)13-6(4-20)9(17)12-3-8(15)16/h5-6,20H,1-4,11H2,(H,12,17)(H,13,14)(H,15,16)(H,18,19)/t5-,6-/m0/s1/f/h12-13,15,18H
GSH Glutathione is a tripeptide. It contains an unusual peptide linkage between the amine group of cysteine and the carboxyl group of the glutamate side chain. It is an antioxidant that protects cells from toxins such as free radicals.[accessedResource: NIFSTD:nlx_mol_20090201][accessDate: 04-11-2010]
C10H17N3O6S
5-L-Glutamyl-L-cysteinylglycine
GSH
NIFSTD:nlx_mol_20090201
gamma-L-Glutamyl-L-cysteinyl-glycine
Reduced glutathione
N-(N-gamma-L-Glutamyl-L-cysteinyl)glycine
GSH Glutathione is a tripeptide. It contains an unusual peptide linkage between the amine group of cysteine and the carboxyl group of the glutamate side chain. It is an antioxidant that protects cells from toxins such as free radicals.
Tomasz Adamusiak
L-gamma-glutamyl-L-cysteinylglycine
N[C@@H](CCC(=O)N[C@@H](CS)C(=O)NCC(O)=O)C(O)=O
http://www.ebi.ac.uk/efo/EFO_0001547
A tripeptide compound consisting of glutamic acid attached via its side chain to the N-terminus of cysteinylglycine.
DSSTox_CID:20583
Tomasz Adamusiak
STRUCTURE_Formula:C20H30N2O3S2
CASRN:66104-23-2
DSSTox_Generic_SID:40583
STRUCTURE_ChemicalName_IUPAC:(8b)-8-[(methylsulfanyl)methyl]-6-propylergoline methanesulfonate
James Malone
Ele Holloway
pergolide methanesulfonate
true
A derived unit which is a standard measure of physical quantity consisting of only a numerical number without any units.
dimensionless unit
Ele Holloway
James Malone
SBC-5
JCRB0819
methoxychlor
1,1'-(2,2,2-trichloroethane-1,1-diyl)bis[4-(methyloxy)benzene]
20827
72-43-5
827
C16H15Cl3O2
Jie Zheng
Tomasz Adamusiak
C57Bl/10 derived non-diabetic mouse strain expressing H2g7.
B10.NOD_H2g7
https://www.cbil.upenn.edu/RADQuerier/php/sampleInfo.php?assay_id=8649&&study_id=2424
Jie Zheng
Tomasz Adamusiak
large adipocyte
Ele Holloway
James Malone
Natural Language Generator 8th April 2010
A Daudi Burkitt's lymphoma cell line is a cell line.
A Daudi Burkitt's lymphoma cell line is bearer of Daudi Burkitt's lymphoma.
Daudi
James Malone
A system of organs subserving the function of respiration and in air-breathing vertebrates consisting typically of the lungs and their nervous and circulatory supply and the channels by which these are continuous with the outer air.[accessedResource: BTO:0000203][accessDate: 04-11-2010]
Apparatus respiratorius[accessedResource: FMAID:7158][accessDate: 04-11-2010]
tracheal system[accessedResource: MAT:0000030][accessDate: 04-11-2010]
FMAID:7158
EMAPA:16727
SAEL:90
respiratory tract
EHDAA:2203
respiratory system[accessedResource: MAT:0000030][accessDate: 04-11-2010]
Apparatus respiratorius
.[accessedResource: FBbt:00005024][accessDate: 04-11-2010]
Functional system which consists of structures involved in respiration.
MFO:0003160
MAT:0000030
tracheal system
MA:0000327
.
AAO:0000541
respiratory tract[accessedResource: BTO:0000203][accessDate: 04-11-2010]
A system of organs subserving the function of respiration and in air-breathing vertebrates consisting typically of the lungs and their nervous and circulatory supply and the channels by which these are continuous with the outer air.
XAO:0000117
EV:0100036
FBbt:00005024
Respiratory system
BTO:0000203
respiratory system structure
TAO:0000272
TADS:0000043
Jie Zheng
Tomasz Adamusiak
cardiovascular system endothelium
MA:0000717
higher cognitive functions
Front part of the brain; involved in planning, organizing, problem solving, selective attention, personality and a variety of "higher cognitive functions" including behavior and emotions.[accessedResource: BTO:0000484][accessDate: 04-11-2010]
MAT:0000505
NIFSTD:birnlex_928
frontal cortex
Tomasz Adamusiak
NIFSTD:nlx_anat_20090601
frontal lobe
FMAID:61824
BTO:0000484
Anterior portion of the frontal cortex, lying anterior to the central sulcus in humans. It is bounded by the parietal cortex posteriorly and the temporal cortex laterally.
Frontal lobe is the anterior-most of five lobes of the cerebral hemisphere. It is bounded by the central sulcus on its posterior border and by the longitudinal cerebral fissure on its medial border.
Frontal region
James Malone
Frontal cortex[accessedResource: NIFSTD:nlx_anat_20090601][accessDate: 04-11-2010]
EV:0100167
Frontal region[accessedResource: FMAID:61824][accessDate: 04-11-2010]
Anterior portion of the frontal cortex, lying anterior to the central sulcus in humans. It is bounded by the parietal cortex posteriorly and the temporal cortex laterally.[accessedResource: NIFSTD:nlx_anat_20090601][accessDate: 04-11-2010]
The dorsal area between the base of the neck and the sacrum.
The dorsal area between the base of the neck and the sacrum.[accessedResource: NCIt:C13062][accessDate: 04-11-2010]
The back; especially : the entire dorsal surface of an animal.
dorsum
The back; especially : the entire dorsal surface of an animal.[accessedResource: BTO:0001713][accessDate: 04-11-2010]
James Malone
BTO:0001713
back
dorsum[accessedResource: BTO:0001713][accessDate: 04-11-2010]
FMAID:14181
NCIt:C13062
Back of body proper
fibroma
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0002010
James Malone
organization
MO_177
An organization is a continuant entity which can play roles, has members, and has a set of organization rules. Members of organizations are either organizations themselves or individual people. Members can bear specific organization member roles that are determined in the organization rules. The organization rules also determine how decisions are made on behalf of the organization by the organization members.
Jie Zheng
organisation
Jie Zheng
Tomasz Adamusiak
Mouse strain with deficiency of the leptin gene (ObOb).
ObOb
http://www.cbil.upenn.edu/RAD/DGAP/php/displayStudy.php?study_id=2340&&download=1#study2340
Ele Holloway
James Malone
BC-5
Pituitary adenoma (disorder)
Ele Holloway
pituitary adenoma
adenoma of the Pituitary gland
Pituitary adenoma, no ICD-O subtype (morphologic abnormality)
Pituitary adenoma - disorder[accessedResource: DOID:3829][accessDate: 04-11-2010]
DOID:3829
Pituitary adenoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:3829][accessDate: 04-11-2010]
Tomasz Adamusiak
adenoma of the Pituitary gland[accessedResource: DOID:3829][accessDate: 04-11-2010]
Ele Holloway
James Malone
Tomasz Adamusiak
listeriolysin
CASRN:72270-41-8
DSSTox_Generic_SID:42688
Ele Holloway
James Malone
AsPC1
SAEL:80
FBbt:00004852
phallus[accessedResource: FBbt:00004852][accessDate: 04-11-2010]
Distal part of the aedeagus consisting of a median, scleratised, pointed lobe through which the ejaculatory duct discharges.
MAT:0000186
EV:0100107
EHDAA:9380
MA:0000408
A male organ of copulation that in male mammals including humans usually functions as the channel by which urine leaves the body.[accessedResource: BTO:0000405][accessDate: 04-11-2010]
A male organ of copulation that in male mammals including humans usually functions as the channel by which urine leaves the body.
FMAID:9707
BTO:0000405
EMAPA:18682
James Malone
penis
phallus
Distal part of the aedeagus consisting of a median, scleratised, pointed lobe through which the ejaculatory duct discharges.[accessedResource: FBbt:00004852][accessDate: 04-11-2010]
A liver cell.[accessedResource: BTO:0000575][accessDate: 04-11-2010]
A liver cell.
The main structural component of the liver. They are specialized epithelial cells that are organized into interconnected plates called lobules.
hepatocyte
BTO:0000575
The main structural component of the liver. They are specialized epithelial cells that are organized into interconnected plates called lobules. Majority of cell population of liver, polygonal in shape, arranged in plates or trabeculae between sinusoids; may have single nucleus or binucleated.
CL:0000182
James Malone
The main structural component of the liver. They are specialized epithelial cells that are organized into interconnected plates called lobules. Majority of cell population of liver, polygonal in shape, arranged in plates or trabeculae between sinusoids; may have single nucleus or binucleated.[accessedResource: CL:0000182][accessDate: 04-11-2010]
Tomasz Adamusiak
gnathal primordium
FBbt:00005534
Clear cell carcinoma of kidney is a renal cell carcinoma described as the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
Clear Cell Renal Cell Carcinoma
Clear Cell Carcinoma of the Kidney
Hypernephroma
DOID:4467
Hypernephroma[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
Kidney Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
Clear cell carcinoma of kidney (disorder)
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.[accessedResource: DOID:4467][accessDate: 04-11-2010]
NCIt:C4033
Conventional Renal Cell Carcinoma
Clear Cell Carcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
Clear Cell Adenocarcinoma of Kidney
Renal Clear Cell Adenocarcinoma
Clear cell carcinoma of kidney (disorder)[accessedResource: DOID:4467][accessDate: 04-11-2010]
James Malone
Clear Cell Renal Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
Clear Cell Adenocarcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
GeneRIF:15709172
Grawitz Tumor
GeneRIF:12576453
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
conventional renal cell carcinoma[accessedResource: DOID:4467][accessDate: 04-11-2010]
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.
Kidney Clear Cell Adenocarcinoma
GeneRIF:14550470
clear cell renal carcinoma
Grawitz Tumor[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
Conventional (Clear Cell) Renal Cell Adenocarcinoma
clear cell carcinoma of kidney
conventional (Clear cell) renal cell carcinoma
Conventional (Clear Cell) Renal Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
conventional (Clear cell) renal cell carcinoma[accessedResource: DOID:4467][accessDate: 04-11-2010]
Renal Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
Clear Cell Adenocarcinoma of Kidney[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
Kidney Clear Cell Carcinoma
Clear Cell Carcinoma of Kidney[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
Kidney Clear Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 04-11-2010]
Clear Cell Adenocarcinoma of the Kidney
GeneRIF:15062033
Chondromyxoid fibroma (morphologic abnormality)
James Malone
CMF - Chondromyxoid fibroma[accessedResource: SNOMEDCT:39553005][accessDate: 04-11-2010]
SNOMEDCT:39553005
DOID:2694
CMF - Chondromyxoid fibroma
chondromyxoid fibroma
NCIt:C3830
Chondromyxoid fibroma (morphologic abnormality)[accessedResource: DOID:2694][accessDate: 04-11-2010]
An uncommon benign neoplasm arising from the bone. It is characterized by the presence of spindle-shaped or stellate chondrocytes, a lobulated growth pattern, myxoid stroma formation, and sometimes multinucleated giant cells. It has been associated with chromosomal rearrangement of 6q13 and 6q25 bands. The most common clinical symptom is mild, localized pain.
An uncommon benign neoplasm arising from the bone. It is characterized by the presence of spindle-shaped or stellate chondrocytes, a lobulated growth pattern, myxoid stroma formation, and sometimes multinucleated giant cells. It has been associated with chromosomal rearrangement of 6q13 and 6q25 bands. The most common clinical symptom is mild, localized pain.[accessedResource: NCIt:C3830][accessDate: 04-11-2010]
STRUCTURE_Formula:2-(1H-imidazol-4-yl)ethyl carbamimidothioate dihydrobromide
James Malone
DSSTox_Generic_SID:C6H12Br2N4S
DSSTox_CID:42560
imetit dihydrobromide
CASRN:32385-58-3
Ele Holloway
Tomasz Adamusiak
Ele Holloway
James Malone
An iron group element atom that has formula Fe.
26Fe
fer
InChIKey=XEEYBQQBJWHFJM-UHFFFAOYAG
ferrum
[Fe]
CHEBI:18248
iron atom
hierro
An iron group element that has formula Fe.
Eisen
iron
http://www.ebi.ac.uk/efo/EFO_0002410
InChI=1/Fe
characterization of functional areas of human genome
James Malone
The International HapMap Project is a partnership of scientists and funding agencies from Canada, China, Japan, Nigeria, the United Kingdom and the United States to develop a public resource that will help researchers find genes associated with human disease and response to pharmaceuticals.
The International HapMap Project
Tha HapMap Project webpage <http://hapmap.ncbi.nlm.nih.gov>
Tomasz Adamusiak
pharyngeal pouch
ZFA:0001106
Tomasz Adamusiak
somite 12
ZFA:0000851
simvastatin
(1S,3R,7S,8S,8aR)-8-{2-[(2R,4R)-4-hydroxy-6-oxotetrahydro-2H-pyran-2-yl]ethyl}-3,7-dimethyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl 2,2-dimethylbutanoate
23581
3581
79902-63-9
C25H38O5
Chondromatous giant cell tumor
A usually benign tumor composed of cells which arise from chondroblasts or their precursors and which tend to differentiate into cartilage cells. It occurs primarily in the epiphyses of adolescents. It is relatively rare and represents less than 2% of all primary bone tumors. The peak incidence is in the second decade of life; it is about twice as common in males as in females. (From Dorland, 27th ed; Holland et al., Cancer Medicine, 3d ed, p1846)[accessedResource: MSH:D002804][accessDate: 04-11-2010]
Chondroblastoma, NOS
Chondroblastomas[accessedResource: MSH:D002804][accessDate: 04-11-2010]
James Malone
Chondroblastoma morphology
Chondromatous giant cell tumour[accessedResource: SNOMEDCT:9001003][accessDate: 04-11-2010]
Chondromatous giant cell tumour
NCIt:C2945
Chondroblastomas
chondroblastoma
Chondroblastoma, NOS[accessedResource: SNOMEDCT:9001003][accessDate: 04-11-2010]
Chondroblastoma of bone[accessedResource: DOID:2649][accessDate: 04-11-2010]
A usually benign tumor composed of cells which arise from chondroblasts or their precursors and which tend to differentiate into cartilage cells. It occurs primarily in the epiphyses of adolescents. It is relatively rare and represents less than 2% of all primary bone tumors. The peak incidence is in the second decade of life; it is about twice as common in males as in females. (From Dorland, 27th ed; Holland et al., Cancer Medicine, 3d ed, p1846)
Chondromatous giant cell tumor[accessedResource: SNOMEDCT:9001003][accessDate: 04-11-2010]
Chondroblastoma NOS (morphologic abnormality)
A benign, lytic neoplasm usually arising from the cartilage in epiphysis and metaphysis of bone. It is a well circumscribed tumor characterized by the presence of chondroblasts, osteoclast-like giant cells, myxoid stroma formation, calcification, and mitotic activity. In aggressive cases, there is rearrangement of the 8q21 chromosome band. The tumor occurs most frequently in children and young adults.
[M]Chondroblastoma NOS (morphologic abnormality)
SNOMEDCT:9001003
[M]Chondroblastoma NOS[accessedResource: SNOMEDCT:189887007][accessDate: 04-11-2010]
[M]Chondroblastoma NOS
DOID:2649
Chondroblastoma NOS (morphologic abnormality)[accessedResource: DOID:2649][accessDate: 04-11-2010]
Codman's tumor[accessedResource: SNOMEDCT:9001003][accessDate: 04-11-2010]
Chondroblastoma of bone
Codman's tumour
[M]Chondroblastoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189887007][accessDate: 04-11-2010]
MSH:D002804
Chondroblastoma morphology[accessedResource: SNOMEDCT:9001003][accessDate: 04-11-2010]
Chondroblastoma (morphologic abnormality)
GeneRIF:13680221
Codman's tumor
A benign, lytic neoplasm usually arising from the cartilage in epiphysis and metaphysis of bone. It is a well circumscribed tumor characterized by the presence of chondroblasts, osteoclast-like giant cells, myxoid stroma formation, calcification, and mitotic activity. In aggressive cases, there is rearrangement of the 8q21 chromosome band. The tumor occurs most frequently in children and young adults.[accessedResource: NCIt:C2945][accessDate: 04-11-2010]
Chondroblastoma (morphologic abnormality)[accessedResource: DOID:2649][accessDate: 04-11-2010]
SNOMEDCT:189887007
Codman's tumour[accessedResource: SNOMEDCT:9001003][accessDate: 04-11-2010]
James Malone
RAW264.7
James Malone
CS57548 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158572&type=germplasm
CS57548
http://www.arabidopsis.org/servlets/TairObject?id=1005158572&type=germplasm
leaf
James Malone
MAT:0000276
obsolete_phyllid
leaf[accessedResource: BTO:0000713][accessDate: 10-05-2010]
BTO:0000713
GRO:0005306[accessedResource: BTO:0000713][accessDate: 10-05-2010]
A lateral outgrowth from a plant stem that is typically a flattened expanded variably shaped greenish organ, constitutes a unit of the foliage, and functions primarily in food manufacture by photosynthesis.
true
duplication
leaf of a moss or liverwort
leaf of a moss or liverwort[accessedResource: MAT:0000276][accessDate: 10-05-2010]
1.8
A lateral outgrowth from a plant stem that is typically a flattened expanded variably shaped greenish organ, constitutes a unit of the foliage, and functions primarily in food manufacture by photosynthesis.[accessedResource: BTO:0000713][accessDate: 10-05-2010]
GRO:0005306
EV:0100106
vas efferens[accessedResource: FBbt:00004958][accessDate: 04-11-2010]
FBbt:00004958
seminal gland
vas efferens
glandula seminalis[accessedResource: BTO:0001234][accessDate: 04-11-2010]
Either of a pair of glandular pouches that lie one on either side of the male reproductive tract and in the human male secrete a sugar- and protein-containing fluid into the ejaculatory duct.[accessedResource: BTO:0001234][accessDate: 04-11-2010]
seminal vesicle
seminal gland[accessedResource: BTO:0001234][accessDate: 04-11-2010]
glandula seminalis
glandula vesiculosa
James Malone
glandula vesiculosa[accessedResource: BTO:0001234][accessDate: 04-11-2010]
Either of a pair of glandular pouches that lie one on either side of the male reproductive tract and in the human male secrete a sugar- and protein-containing fluid into the ejaculatory duct.
FMAID:19386
vesicula seminalis[accessedResource: BTO:0001234][accessDate: 04-11-2010]
BTO:0001234
MAT:0000171
vesicula seminalis
Ele Holloway
James Malone
HT3
HT-3
James Malone
http://www.ebi.ac.uk/efo/EFO_0001692
true
A derived unit is a unit which is derived from base units.
A unit which is derived from base units.
derived unit
UO:0000046
Corti's organ[accessedResource: BTO:0001691][accessDate: 04-11-2010]
organ of corti
organum spirale
The organ, resting on the basilar membrane in the cochlear duct, that contains the special sensory receptors for hearing; it consists of neuroepithelial hair cells and several types of supporting cells, including the inner and outer pillar cells, inner and outer phalangeal cells, border cells, and Hensen's cells.[accessedResource: BTO:0001691][accessDate: 04-11-2010]
James Malone
organum spirale[accessedResource: BTO:0001691][accessDate: 04-11-2010]
Corti's organ
The organ, resting on the basilar membrane in the cochlear duct, that contains the special sensory receptors for hearing; it consists of neuroepithelial hair cells and several types of supporting cells, including the inner and outer pillar cells, inner and outer phalangeal cells, border cells, and Hensen's cells.
Spiral Organ of Corti
Spiral Organ of Corti[accessedResource: NCIt:C33223][accessDate: 04-11-2010]
basilar papilla
basilar papilla[accessedResource: BTO:0001691][accessDate: 04-11-2010]
BTO:0001691
NCIt:C33223
spiral organ[accessedResource: BTO:0001691][accessDate: 04-11-2010]
spiral organ
Helen Parkinson
ChIP-seq is an assay in which chromatin immunoprecipitation with high throughput sequencing is used to identify the cistrome of DNA-associated proteins.
ChIP-seq
http://en.wikipedia.org/wiki/Chip-Sequencing
alendronic acid
66376-36-1
alendronate
A maturity quality inhering in an individual by virtue of the individual having attained sexual maturity and full growth[accessedResource: NIFSTD:birnlex_681][accessDate: 04-11-2010]
MAT:0000403
adult stage[accessedResource: MAT:0000403][accessDate: 04-11-2010]
adult
FBdv:00005369
EVM:2990028
OntologyMappingImporter following MAT:0000403
NIFSTD:birnlex_228
A maturity quality inhering in an individual by virtue of the individual having attained sexual maturity and full growth
EV:0300070
James Malone
Tomasz Adamusiak
NIFSTD:birnlex_681
XAO:1000009
adult stage
WBIs:0000041
FMAID:45664
James Malone
The reproductive system in men includes the prostate, the testes, and the penis.
MA:0000396
male genital system
BTO:0000082
male genitalia
TADS:0000460
ZFA:0000242
male organism
EMAPA:17968
male genital system[accessedResource: MAT:0000029][accessDate: 04-11-2010]
male genitalia[accessedResource: MAT:0000029][accessDate: 04-11-2010]
Gonochoristic organism that can produce male gametes.[accessedResource: ZFA:0000242][accessDate: 04-11-2010]
male reproductive system
male
MAT:0000029
EV:0100101
XAO:0000155
WBbt:0005574
male organism[accessedResource: ZFA:0000242][accessDate: 04-11-2010]
male[accessedResource: MAT:0000029][accessDate: 04-11-2010]
The reproductive system in men includes the prostate, the testes, and the penis.[accessedResource: BTO:0000082][accessDate: 04-11-2010]
EHDAA:8136
Gonochoristic organism that can produce male gametes.
Tomasz Adamusiak
ILSXISS14/TejJ
http://jaxmice.jax.org/strain/009261.html
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#growth_condition_design[accessedResource: MO_588][accessDate: 04-11-2010]
Tomasz Adamusiak
growth condition design
MO_588
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#growth_condition_design
A precursor B cell is a B cell with the phenotype CD10-positive (P08473/NEP_HUMAN; PIRSF001194).
pre-B cell
CL:0000817
pre-B cell[accessedResource: CL:0000817][accessDate: 04-11-2010]
T-cell neoplasm
A precursor B cell is a B cell with the phenotype CD10-positive.[accessedResource: CL:0000817][accessDate: 04-11-2010]
precursor B-cell
precursor B cell[accessedResource: CL:0000817][accessDate: 04-11-2010]
Tomasz Adamusiak
neoplasm of immature B and T cells
A precursor B cell is a B cell with the phenotype CD10-positive.
James Malone
BTO:0000667
Skin cell, of the keratinized layer of epidermis: its characteristic intermediate filament protein is cytokeratin.[accessedResource: BTO:0000667][accessDate: 04-11-2010]
malpighian cell[accessedResource: CL:0000312][accessDate: 04-11-2010]
malpighian cell
An epidermal cell which synthesizes keratin and undergoes a characteristic change as it moves upward from the basal layers of the epidermis to the cornified (horny) layer of the skin. Successive stages of differentiation of the keratinocytes forming the epidermal layers are basal cell, spinous or prickle cell, and the granular cell.[accessedResource: CL:0000312][accessDate: 04-11-2010]
Skin cell, of the keratinized layer of epidermis: its characteristic intermediate filament protein is cytokeratin.
keratinocyte
CL:0000312
An epidermal cell which synthesizes keratin and undergoes a characteristic change as it moves upward from the basal layers of the epidermis to the cornified (horny) layer of the skin. Successive stages of differentiation of the keratinocytes forming the epidermal layers are basal cell, spinous or prickle cell, and the granular cell.
James Malone
Tomasz Adamusiak
HP:0000855
diminished effectiveness of insulin in lowering plasma glucose levels
MP:0005331
insulin resistance
Ele Holloway
Drug resistance to insulin (disorder)[accessedResource: DOID:2017][accessDate: 04-11-2010]
Drug resistance to insulin (disorder)
diminished effectiveness of insulin in lowering plasma glucose levels[accessedResource: MP:0005331][accessDate: 04-11-2010]
DOID:2017
Tomasz Adamusiak
symptomatic heart failure
ACC Stage C
A centrally-located portion of the brain affected by Huntington's Disease. The putamen is structurally similar to the caudate nucleus together with which it composes what is termed the striatum.[accessedResource: BTO:0000212][accessDate: 04-11-2010]
James Malone
A centrally-located portion of the brain affected by Huntington's Disease. The putamen is structurally similar to the caudate nucleus together with which it composes what is termed the striatum.
caudate putamen
BTO:0000212
dendritic cell-derived osteoclast
A human embryonal carcinoma (EC) stem cell line used as a model system for the study of neuronal differentiation and differentiated into neuronal like cells
NTera2 derived dopaminergic neuronal like cells
N-(3-chloro-4-((3-fluorophenyl)methoxy)phenyl)-6-(5-(((2-(methylsulfonyl)ethyl)amino)methyl)-2-furanyl)-4-quinazolinamine
CS(=O)(=O)CCNCc1ccc(o1)-c1ccc2ncnc(Nc3ccc(OCc4cccc(F)c4)c(Cl)c3)c2c1
lapatinib
N-[3-chloro-4-(3-fluorobenzyloxy)phenyl]-6-[5-({[2-(methanesulfonyl)ethyl]amino}methyl)furan-2-yl]quinazolin-4-amine
A quinazoline that has formula C29H26ClFN4O4S.
CHEBI:49603
http://www.ebi.ac.uk/efo/EFO_0001562
N-{3-CHLORO-4-[(3-FLUOROBENZYL)OXY]PHENYL}-6-[5-({[2-(METHYLSULFONYL)ETHYL]AMINO}METHYL)-2-FURYL]-4-QUINAZOLINAMINE
C29H26ClFN4O4S
Tykerb
InChIKey=BCFGMOOMADDAQU-CSKMVECVCB
GW 572016
InChI=1/C29H26ClFN4O4S/c1-40(36,37)12-11-32-16-23-7-10-27(39-23)20-5-8-26-24(14-20)29(34-18-33-26)35-22-6-9-28(25(30)15-22)38-17-19-3-2-4-21(31)13-19/h2-10,13-15,18,32H,11-12,16-17H2,1H3,(H,33,34,35)/f/h35H
James Malone
follicle cell
CL:0000477
http://www.ebi.ac.uk/efo/EFO_0001504
CCOP(=S)(OCC)Oc1nc(Cl)c(Cl)cc1Cl
O,O-diethyl O-(3,5,6-trichloropyridin-2-yl) phosphorothioate
CHEBI:34631
Chlorpyriphos
C9H11Cl3NO3PS
InChIKey=SBPBAQFWLVIOKP-UHFFFAOYAG
Chlorpyrifos-ethyl
chlorpyrifos
InChI=1/C9H11Cl3NO3PS/c1-3-14-17(18,15-4-2)16-9-7(11)5-6(10)8(12)13-9/h5H,3-4H2,1-2H3
Trichlorpyrphos
An organochlorine acaricide that has formula C9H11Cl3NO3PS.
Phosphorothioic acid, O,O-diethyl O-(3,5,6-trichloro-2-pyridinyl) ester
James Malone
m-Chlorpyrifos
O,O-diethyl O-(3,5,6-trichloropyridin-2-yl) thiophosphate
o,o-Diethyl-o-(3,5,6-trichloro-2-pyridyl)phosphorothioate
GeneRIF:14551164
Sarcoidosis (disorder)[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
NCIt:C34995
lymphogranulomatosis[accessedResource: DOID:11335][accessDate: 04-11-2010]
Disease, Schaumann
An idiopathic systemic inflammatory granulomatous disorder comprised of epithelioid and multinucleated giant cells with little necrosis. It usually invades the lungs with fibrosis and may also involve lymph nodes, skin, liver, spleen, eyes, phalangeal bones, and parotid glands.
GeneRIF:15735647
GeneRIF:12091241
Benign lymphogranulomatosis of Schaumann[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
GeneRIF:15976369
Sarcoidoses
BESNIER BOECK DIS[accessedResource: MSH:D012507][accessDate: 04-11-2010]
GeneRIF:14508706
Syndrome, Schaumann's
Besnier-Boeck Disease[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Schaumann Syndrome
GeneRIF:12413001
DOID:11335
GeneRIF:15019280
GeneRIF:16236915
GeneRIF:14597055
Uveoparotid fever[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
Boeck's Disease[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Schaumann's Syndromes[accessedResource: MSH:D012507][accessDate: 04-11-2010]
GeneRIF:12068984
GeneRIF:15713215
Miliary lupoid of Boeck[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
James Malone
An idiopathic systemic inflammatory granulomatous disorder comprised of epithelioid and multinucleated giant cells with little necrosis. It usually invades the lungs with fibrosis and may also involve lymph nodes, skin, liver, spleen, eyes, phalangeal bones, and parotid glands.[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Boeck Disease[accessedResource: MSH:D012507][accessDate: 04-11-2010]
GeneRIF:15750046
Boeck Sarcoid[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Schaumann's Syndromes
Boecks Disease
SNOMEDCT:31541009
SCHAUMANN DIS[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Lupus pernio of Besnier[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
SCHAUMANN DIS
Boeck's Disease
GeneRIF:15332393
GeneRIF:15702130
Boeck's sarcoidosis
GeneRIF:15942292
Syndrome, Schaumann[accessedResource: MSH:D012507][accessDate: 04-11-2010]
GeneRIF:12039524
Sarcoidosis, NOS
ICD9:135
Sarcoidoses[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Benign lymphogranulomatosis of Schaumann
GeneRIF:14601651
GeneRIF:15459013
Boeck's sarcoid[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
Besnier-Boeck-Schaumann Syndrome[accessedResource: MSH:D012507][accessDate: 04-11-2010]
GeneRIF:16053025
An idiopathic inflammatory disorder characterized by the formation of non-necrotizing epithelioid granulomas which contain giant cells. It usually affects the lungs, lymph nodes, liver, and skin.
GeneRIF:15004750
Uveoparotid fever
Darier-Roussy sarcoid[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
An idiopathic inflammatory disorder characterized by the formation of non-necrotizing epithelioid granulomas which contain giant cells. It usually affects the lungs, lymph nodes, liver, and skin.[accessedResource: NCIt:C34995][accessDate: 04-11-2010]
sarcoidosis
MSH:D012507
Lupus pernio of Besnier
Syndrome, Besnier-Boeck-Schaumann
GeneRIF:12366781
Boeck Sarcoid, any site[accessedResource: DOID:11335][accessDate: 04-11-2010]
Boeck Sarcoid
BESNIER BOECK DIS
GeneRIF:15083893
Boeck Sarcoid, any site
lymphogranulomatosis
Darier-Roussy sarcoid
Sarcoidosis, NOS[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
Boecks Disease[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Besnier-Boeck Disease
Boeck's Sarcoid
Disease, Schaumann[accessedResource: MSH:D012507][accessDate: 04-11-2010]
GeneRIF:12180727
Boeck Disease
Boecks sarcoidosis[accessedResource: SNOMEDCT:31541009][accessDate: 04-11-2010]
Sarcoidosis (disorder)
Schaumann's Syndrome[accessedResource: MSH:D012507][accessDate: 04-11-2010]
Miliary lupoid of Boeck
GeneRIF:12047365
GeneRIF:16053028
Tomasz Adamusiak
vagal ganglion 2
ZFA:0001303
James Malone
Ele Holloway
KPL1
James Malone
An assay with input protein
protein assay
Tomasz Adamusiak
horizontal myoseptum
ZFA:0000671
NCI-H125
H125
Ele Holloway
DSSTox_CID:42584
DSSTox_Generic_SID:C25H29N3O2
James Malone
STRUCTURE_Formula:benzyl {[(8beta)-1,6-dimethylergolin-8-yl]methyl}carbamate
Tomasz Adamusiak
metergoline
CASRN:17692-51-2
curcumin
(1E,6E)-1,7-bis[4-hydroxy-3-(methyloxy)phenyl]hepta-1,6-diene-3,5-dione
1421
31077
458-37-7
C21H20O6
dibutyryl adenosine 3',5'-monophosphate
dibutyryl cyclic 3',5'-adenylic acid
CCCC(=O)Nc1ncnc2n(cnc12)[C@@H]1O[C@@H]2COP(O)(=O)O[C@H]2[C@H]1OC(=O)CCC
C18H24N5O8P
dibutyryl cyclic AMP
bucladesine
dibutyryl adenosine 3',5'-cyclic phosphate
bucladesinum
6-N-butanoyl-2'-O-butanoyladenosine 3',5'-(hydrogen phosphate)
dibutyryladenosine 3',5'-cyclic monophosphate
N(6),O(2')-dibutyryl-3',5'-cyclic AMP
N(6),O(2')-dibutyryl adenosine 3',5'-cyclic monophosphate
N(6),O(2')-dibutyryladenosine 3',5'-monophosphate
InChI=1/C18H24N5O8P/c1-3-5-11(24)22-16-13-17(20-8-19-16)23(9-21-13)18-15(30-12(25)6-4-2)14-10(29-18)7-28-32(26,27)31-14/h8-10,14-15,18H,3-7H2,1-2H3,(H,26,27)(H,19,20,22,24)/t10-,14-,15-,18-/m1/s1/f/h22,26H
dibutyryl-3',5'-AMP
3',5'-cyclic AMP dibutyrate
dibutyryladenosine cyclic monophosphate
N(6),2'-O-dibutyryl cyclic AMP
http://www.ebi.ac.uk/efo/EFO_0001495
CHEBI:50095
InChIKey=CJGYSWNGNKCJSB-NOICQAOIDM
dibutyryl cyclic adenosine 3',5'-monophosphate
bucladesina
N(6),2'-O-dibutyryl cAMP
dibutyryl 3',5'-cyclic AMP
dibutyryl cAMP
Ele Holloway
James Malone
CORL23
CORL-23
Perinatal Subarachnoid Hemorrhage
Subarachnoid haemorrhage NOS[accessedResource: SNOMEDCT:195162008][accessDate: 04-11-2010]
SAH - Subarachnoid hemorrhage
Aneurysmal Subarachnoid Hemorrhage[accessedResource: MSH:D013345][accessDate: 04-11-2010]
Subarachnoid haemorrhage[accessedResource: SNOMEDCT:21454007][accessDate: 04-11-2010]
Hemorrhages, Perinatal Subarachnoid[accessedResource: MSH:D013345][accessDate: 04-11-2010]
James Malone
GeneRIF:15331787
Subarachnoid Hemorrhage, Intracranial[accessedResource: MSH:D013345][accessDate: 04-11-2010]
GeneRIF:12677022
Subarachnoid Hemorrhages, Spontaneous[accessedResource: MSH:D013345][accessDate: 04-11-2010]
SNOMEDCT:195162008
GeneRIF:15381648
Hemorrhages, Subarachnoid
Subarachnoid Hemorrhage, Spontaneous[accessedResource: MSH:D013345][accessDate: 04-11-2010]
Hemorrhages, Perinatal Subarachnoid
MSH:D013345
Bleeding into the intracranial or spinal SUBARACHNOID SPACE, most resulting from INTRACRANIAL ANEURYSM rupture. It can occur after traumatic injuries (SUBARACHNOID HEMORRHAGE, TRAUMATIC). Clinical features include HEADACHE; NAUSEA; VOMITING, nuchal rigidity, variable neurological deficits and reduced mental status.[accessedResource: MSH:D013345][accessDate: 04-11-2010]
ICD9:430
Subarachnoid haemorrhage
GeneRIF:15091109
GeneRIF:15665056
DOID:11236
SAH - Subarachnoid hemorrhage[accessedResource: SNOMEDCT:21454007][accessDate: 04-11-2010]
Subarachnoid hemorrhage NOS[accessedResource: SNOMEDCT:195162008][accessDate: 04-11-2010]
Hemorrhages, Aneurysmal Subarachnoid[accessedResource: MSH:D013345][accessDate: 04-11-2010]
Subarachnoid hemorrhage NOS
Subarachnoid hemorrhage NOS (disorder)
GeneRIF:15947264
Subarachnoid hemorrhage (disorder)[accessedResource: SNOMEDCT:21454007][accessDate: 04-11-2010]
GeneRIF:14753493
Hemorrhages, Subarachnoid[accessedResource: MSH:D013345][accessDate: 04-11-2010]
Subarachnoid hemorrhage NOS (disorder)[accessedResource: DOID:11236][accessDate: 04-11-2010]
Hemorrhage, Intracranial Subarachnoid
GeneRIF:15947258
Subarachnoid Hemorrhages, Intracranial[accessedResource: MSH:D013345][accessDate: 04-11-2010]
Bleeding into the intracranial or spinal SUBARACHNOID SPACE, most resulting from INTRACRANIAL ANEURYSM rupture. It can occur after traumatic injuries (SUBARACHNOID HEMORRHAGE, TRAUMATIC). Clinical features include HEADACHE; NAUSEA; VOMITING, nuchal rigidity, variable neurological deficits and reduced mental status.
Subarachnoid Hemorrhages, Aneurysmal
Subarachnoid haemorrhage NOS
SAHs (Subarachnoid Hemorrhage)[accessedResource: MSH:D013345][accessDate: 04-11-2010]
GeneRIF:15297630
Spontaneous Subarachnoid Hemorrhage
Subarachnoid hemorrhage (disorder)
SAHs (Subarachnoid Hemorrhage)
Hemorrhages, Intracranial Subarachnoid
SAH - Subarachnoid haemorrhage
SAH - Subarachnoid haemorrhage[accessedResource: SNOMEDCT:21454007][accessDate: 04-11-2010]
Perinatal Subarachnoid Hemorrhage[accessedResource: MSH:D013345][accessDate: 04-11-2010]
subarachnoid hemorrhage
Spontaneous Subarachnoid Hemorrhages
Aneurysmal Subarachnoid Hemorrhage
SNOMEDCT:21454007
Adenoma, Prostatic[accessedResource: MSH:D011470][accessDate: 04-11-2010]
GeneRIF:12771801
Benign Prostate Hyperplasia
Adenomas, Prostatic[accessedResource: MSH:D011470][accessDate: 04-11-2010]
Increase in constituent cells in the PROSTATE, leading to enlargement of the organ (hypertrophy) and adverse impact on the lower urinary tract function. This can be caused by increased rate of cell proliferation, reduced rate of cell death, or both.
Hyperplasia of prostate
BEP - Benign enlargement of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
benign prostatic hyperplasia, NOS[accessedResource: DOID:11131][accessDate: 04-11-2010]
benign hypertrophy of prostate NOS[accessedResource: DOID:11131][accessDate: 04-11-2010]
Glandular, stromal and muscular hyperplasia of prostate gland[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
Hyperplasia of prostate (disorder)
GeneRIF:12399530
Benign adenoma of prostate
GeneRIF:12673556
BPH
Prostatauxe
Hypertrophy (benign) of prostate
Hyperplasia of prostate (disorder)[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
Prostatic hypertrophy
Enlarged prostate - benign
Benign Hyperplasia of Prostate
Benign Prostatic Hyperplasia - BPH
Adenomyomatous hyperplasia of prostate gland
Benign Hyperplasia of Prostate[accessedResource: NCIt:C2897][accessDate: 04-11-2010]
Benign Prostatic Hyperplasia - BPH[accessedResource: NCIt:C2897][accessDate: 04-11-2010]
Nodular hyperplasia of prostate gland
GeneRIF:12530058
Adenofibromatous hypertrophy of prostate, NOS
Hyperplasia of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
Adenofibromatous hypertrophy of prostate, NOS[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
A disease caused by hyperplastic process of non-transformed prostatic cells.
GeneRIF:15492805
BEP - Benign enlargement of prostate
GeneRIF:16114059
Benign prostatic hyperplasia, NOS
GeneRIF:14678983
GeneRIF:12111701
Hyperplasia of prostate, NOS[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
A non-cancerous nodular enlargement of the prostate gland. It is characterized by the presence of epithelial cell nodules, and stromal nodules containing fibrous and smooth muscle elements. It is the most common urologic disorder in men, causing blockage of urine flow.[accessedResource: NCIt:C2897][accessDate: 04-11-2010]
GeneRIF:12111704
Glandular, stromal AND/OR muscular hyperplasia of prostate gland[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
Enlarged prostate - benign[accessedResource: DOID:11131][accessDate: 04-11-2010]
GeneRIF:15678497
GeneRIF:15083213
Hyperplasia of prostate, NOS
Benign Hyperplasia of the Prostate[accessedResource: NCIt:C2897][accessDate: 04-11-2010]
Prostatic hyper -benign[accessedResource: DOID:11131][accessDate: 04-11-2010]
A non-cancerous nodular enlargement of the prostate gland. It is characterized by the presence of epithelial cell nodules, and stromal nodules containing fibrous and smooth muscle elements. It is the most common urologic disorder in men, causing blockage of urine flow.
GeneRIF:14604900
GeneRIF:12552318
Fibromuscular hyperplasia of prostate gland[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
Prostatic hyper -benign
Prostatic Adenoma
BPH - Benign prostatic hypertrophy[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
GeneRIF:15129425
Glandular, stromal AND/OR muscular hyperplasia of prostate gland
benign prostatic hypertrophy
GeneRIF:15611997
Adenomyomatous hyperplasia of prostate gland[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
GeneRIF:15599946
Benign enlargement of prostate, NOS[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
Benign adenoma of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
GeneRIF:12595443
Lobular hyperplasia of prostate gland[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
GeneRIF:12142541
benign prostatic hyperplasia (disorder)[accessedResource: DOID:11131][accessDate: 04-11-2010]
NCIt:C2897
Hypertrophy (benign) of prostate[accessedResource: ICD9:600.0][accessDate: 04-11-2010]
Benign fibroma of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
Benign fibroma of prostate
Glandular, stromal and muscular hyperplasia of prostate gland
Benign myoma of prostate
Benign prostatic hyperplasia (disorder)
Benign myoma of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
Nodular hyperplasia of prostate gland[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
Hyperplasia, Prostatic
SNOMEDCT:367483003
James Malone
benign prostatic hyperplasia
Benign enlargement of prostate, NOS
Adenofibromatous hypertrophy of prostate
BPH[accessedResource: NCIt:C2897][accessDate: 04-11-2010]
Benign Hyperplasia of the Prostate
Benign enlargement of prostate[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
GeneRIF:15515049
GeneRIF:15999119
Prostatic area hypertrophy
A disease caused by hyperplastic process of non-transformed prostatic cells.[accessedResource: MSH:D011470][accessDate: 04-11-2010]
GeneRIF:15136785
Prostatauxe[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
Hyperplasia, Prostatic[accessedResource: MSH:D011470][accessDate: 04-11-2010]
benign hypertrophy of prostate NOS
Prostatic hypertrophy[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
GeneRIF:15314639
GeneRIF:16018939
Lobular hyperplasia of prostate gland
Prostatic area hypertrophy[accessedResource: SNOMEDCT:266569009][accessDate: 04-11-2010]
Prostatic Adenomas
SNOMEDCT:266569009
DOID:11131
MSH:D011470
Fibromuscular hyperplasia of prostate gland
Increase in constituent cells in the PROSTATE, leading to enlargement of the organ (hypertrophy) and adverse impact on the lower urinary tract function. This can be caused by increased rate of cell proliferation, reduced rate of cell death, or both.[accessedResource: MSH:D011470][accessDate: 04-11-2010]
Benign Prostatic Hypertrophy[accessedResource: MSH:D011470][accessDate: 04-11-2010]
ICD9:600.0
Benign enlargement of prostate
BPH - Benign prostatic hypertrophy
GeneRIF:15178433
Adenofibromatous hypertrophy of prostate[accessedResource: SNOMEDCT:367483003][accessDate: 04-11-2010]
GeneRIF:11550212
GeneRIF:15621731
Benign Prostate Hyperplasia[accessedResource: NCIt:C2897][accessDate: 04-11-2010]
InChI=1/C7H7NO3/c8-4-1-2-6(9)5(3-4)7(10)11/h1-3,9H,8H2,(H,10,11)/f/h10H
Claversal
C7H7NO3
Nc1ccc(O)c(c1)C(O)=O
CHEBI:6775
Fisalamine
InChIKey=KBOPZPXVLCULAV-KZFATGLACE
Mesalazina
Mesasal
Iialda
5-Aminosalicylic acid
Canasa
p-Aminosalicylsaeure
Pentasa
mesalamine
http://www.ebi.ac.uk/efo/EFO_0001569
5-amino-2-hydroxybenzoic acid
Lixacol
Salofalk
Mesalazine
Rowasa
Asacol
An aromatic amine that has formula C7H7NO3.
m-Aminosalicylic acid
Mesalazinum
Asacolitin
5-ASA
3-carboxy-4-hydroxyaniline
Jie Zheng
James Malone
feature extraction
MO_928
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#feature_extraction
The process of obtaining quantifiable values from the scanned image of the array. Exact synonyms: image analysis, image quantification
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#feature_extraction[accessedResource: MO_928][accessDate: 04-11-2010]
GeneRIF:15502805
papillary renal cell carcinoma
Papillary (Chromophil) Renal Cell Carcinoma[accessedResource: NCIt:C6975][accessDate: 04-11-2010]
Also known as chromophil carcinoma, it represents a minority of renal cell carcinomas. It can be hereditary or sporadic. The sporadic papillary renal cell carcinoma is characterized by trisomy of chromosomes 7, 16, and 17, and loss of chromosome Y. The peak incidence is in the sixth and seven decades. It is classified as type 1 or 2, based on the cytoplasmic volume and the thickness of the lining neoplastic cells. The prognosis is more favorable than for conventional (clear cell) renal cell carcinoma. -- 2003
Chromophil Carcinoma of the Kidney
GeneRIF:15579033
Chromophil Renal Cell Carcinoma[accessedResource: NCIt:C6975][accessDate: 04-11-2010]
Papillary (Chromophil) Renal Cell Carcinoma
NCIt:C6975
DOID:4465
James Malone
Papillary renal cell carcinoma is a renal cell carcinoma characterized as the second most common type of renal cell carcinoma. The cancerous cells form some projections in a finger shape, called papillae, in the tumor. This type of cancer is more common among African Americans and has a good prognosis if treated with surgery in its early stages.[accessedResource: DOID:4465][accessDate: 04-11-2010]
GeneRIF:15073597
Chromophil Carcinoma of kidney
Also known as chromophil carcinoma, it represents a minority of renal cell carcinomas. It can be hereditary or sporadic. The sporadic papillary renal cell carcinoma is characterized by trisomy of chromosomes 7, 16, and 17, and loss of chromosome Y. The peak incidence is in the sixth and seven decades. It is classified as type 1 or 2, based on the cytoplasmic volume and the thickness of the lining neoplastic cells. The prognosis is more favorable than for conventional (clear cell) renal cell carcinoma. -- 2003[accessedResource: NCIt:C6975][accessDate: 04-11-2010]
Chromophil Carcinoma of the Kidney[accessedResource: NCIt:C6975][accessDate: 04-11-2010]
Chromophil Renal Cell Carcinoma
Papillary renal cell carcinoma is a renal cell carcinoma characterized as the second most common type of renal cell carcinoma. The cancerous cells form some projections in a finger shape, called papillae, in the tumor. This type of cancer is more common among African Americans and has a good prognosis if treated with surgery in its early stages.
Chromophil Carcinoma of Kidney[accessedResource: NCIt:C6975][accessDate: 04-11-2010]
Tomasz Adamusiak
pharyngeal pouches 2-6
ZFA:0001129
Hexadecylic acid
CH3-[CH2]14-COOH
CHEBI:15756
cetylic acid
hexadecanoic acid, ion(1-)
Pentadecanecarboxylic acid
Palmitic acid
InChIKey=IPCSVZSSVZVIGE-HCKMINDGCQ
n-hexadecanoic acid
hexadecanoate
InChI=1/C16H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16(17)18/h2-15H2,1H3,(H,17,18)/f/h17H
Hexadecanoic acid
C16H32O2
n-hexadecoic acid
A straight-chain, sixteen-carbon saturated fatty acid and major component of the oil from palm trees; the first fatty acid produced during lipogenesis, from which longer fatty acids can be produced. Reportedly has detrimental cardiovascular effects when there is insufficient intake of linoleic acid.
A straight-chain, 16-carbon saturated fatty acid and major component of the oil from palm trees; the first fatty acid produced during lipogenesis, from which longer fatty acids can be produced. Reportedly has detrimental cardiovascular effects when there is insufficient intake of linoleic acid.
CH3-[CH2]14-COO(-)
1-Pentadecanecarboxylic acid
CCCCCCCCCCCCCCCC(O)=O
palmitate
http://www.ebi.ac.uk/efo/EFO_0001552
Palmitinsaeure
hexadecoic acid
A straight-chain saturated fatty acid that has formula C16H32O2.
Tomasz Adamusiak
NCI-H460
MCC:0000356
N-amidinosarcosine
alpha-Methylguanidino acetic acid
A glycine derivative that has formula C4H9N3O2.
Methylglycocyamine
C4H9N3O2
(alpha-methylguanido)acetic acid
creatine
N-methyl-N-guanylglycine
http://www.ebi.ac.uk/efo/EFO_0001514
InChI=1/C4H9N3O2/c1-7(4(5)6)2-3(8)9/h2H2,1H3,(H3,5,6)(H,8,9)/f/h5,8H,6H2
Kreatin
N-(aminoiminomethyl)-N-methylglycine
(N-methylcarbamimidamido)acetic acid
N-[(E)-AMINO(IMINO)METHYL]-N-METHYLGLYCINE
InChIKey=CVSVTCORWBXHQV-FVNFBLHMCI
CHEBI:16919
CN(CC(O)=O)C(N)=N
Creatin
For neoplasms, a non-infiltrating and non-metastasizing neoplastic process that is characterized by the absence of morphologic features associated with malignancy (e.g., severe atypia, nuclear pleomorphism, tumor cell necrosis, and abnormal mitoses). For other conditions, a process that is mild in nature and not dangerous to health.[accessedResource: NCIt:C14172][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
For neoplasms, a non-infiltrating and non-metastasizing neoplastic process that is characterized by the absence of morphologic features associated with malignancy (e.g., severe atypia, nuclear pleomorphism, tumor cell necrosis, and abnormal mitoses). For other conditions, a process that is mild in nature and not dangerous to health.
benign
NCIt:C14172
Ele Holloway
James Malone
Tomasz Adamusiak
neocarzinostatin
CASRN:02-02-9014
DSSTox_Generic_SID:40557
InChIKey=RLAWWYSOJDYHDC-YMXGEOMKDH
lisinopril
N(2)-[(1S)-1-carboxy-3-phenylpropyl]-L-lysyl-L-proline
[N2-[(S)-1-CARBOXY-3-PHENYLPROPYL]-L-LYSYL-L-PROLINE
lisinopril anhydrous
http://www.ebi.ac.uk/efo/EFO_0001566
(S)-1-(N(2)-(1-carboxy-3-phenylpropyl)-L-lysyl)-L-proline
A dipeptide that has formula C21H31N3O5.
InChI=1/C21H31N3O5/c22-13-5-4-9-16(19(25)24-14-6-10-18(24)21(28)29)23-17(20(26)27)12-11-15-7-2-1-3-8-15/h1-3,7-8,16-18,23H,4-6,9-14,22H2,(H,26,27)(H,28,29)/t16-,17-,18-/m0/s1/f/h26,28H
C21H31N3O5
James Malone
NCCCC[C@H](N[C@@H](CCc1ccccc1)C(O)=O)C(=O)N1CCC[C@H]1C(O)=O
CHEBI:43755
James Malone
Tomasz Adamusiak
crystal cell
CL:0000392
FBbt:00001690
orotic acid
2,6-dihydroxypyrimidine-4-carboxylic acid
25814
5814
65-86-1
C5H4N2O4
Ele Holloway
James Malone
MS428
Ele Holloway
James Malone
DMS153
Tomasz Adamusiak
chordo neural hinge
ZFA:0001082
James Malone
Canton S
FBst0000001
James Malone
R1 is a mouse embryonic stem cell line.
R1
Ele Holloway
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#sex_design[accessedResource: MO_575][accessDate: 04-11-2010]
Tomasz Adamusiak
sex design
MO_575
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#sex_design
acrolein
107-02-8
20023
23
C3H4O
acrylaldehyde
(betaR)-N(alpha)-{[6-amino-2-((1S)-3-amino-1-{[(2S)-2,3-diamino-3-oxopropyl]amino}-3-oxopropyl)-5-methylpyrimidin-4-yl]carbonyl}-beta-{2-O-[3-O-(aminocarbonyl)-alpha-D-mannopyranosyl]-alpha-L-gulopyranosyloxy}-N-[(1R,2S,3S)-5-({(1S,2R)-1-[({2-[4-({[3-(dimethylsulfonio)propyl]amino}carbonyl)-2,4'-bi-1,3-thiazol-2'-yl]ethyl}amino)carbonyl]-2-hydroxypropyl}amino)-3-hydroxy-4-methyl-5-oxopentan-2-yl]-L-histidinamide
A bleomycin that has formula C55H84N17O21S3.
InChIKey=OYVAGSVQBOHSSS-IIMGSDJHDB
InChI=1/C55H83N17O21S3/c1-20-33(69-46(72-44(20)58)25(12-31(57)76)64-13-24(56)45(59)82)50(86)71-35(41(26-14-61-19-65-26)91-54-43(39(80)37(78)29(15-73)90-54)92-53-40(81)42(93-55(60)88)38(79)30(16-74)89-53)51(87)66-22(3)36(77)21(2)47(83)70-34(23(4)75)49(85)63-10-8-32-67-28(18-94-32)52-68-27(17-95-52)48(84)62-9-7-11-96(5)6/h14,17-19,21-25,29-30,34-43,53-54,64,73-75,77-81H,7-13,15-16,56H2,1-6H3,(H13-,57,58,59,60,61,62,63,65,66,69,70,71,72,76,82,83,84,85,86,87,88)/p+1/t21-,22+,23+,24-,25-,29-,30+,34-,35-,36-,37+,38+,39-,40-,41-,42-,43-,53+,54-/m0/s1/fC55H84N17O21S3/h61-63,66,70-71H,57-60H2/q+1
Bleomycin
[H][C@](C)(NC(=O)[C@@]([H])(NC(=O)c1nc(nc(N)c1C)[C@H](CC(N)=O)NC[C@H](N)C(N)=O)[C@@]([H])(O[C@@H]1O[C@@H](CO)[C@@H](O)[C@H](O)[C@@H]1O[C@H]1O[C@H](CO)[C@@H](O)[C@H](OC(N)=O)[C@@H]1O)c1c[nH]cn1)[C@@H](O)[C@H](C)C(=O)N[C@]([H])(C(=O)NCCc1nc(cs1)-c1nc(cs1)C(=O)NCCC[S+](C)C)[C@@]([H])(C)O
http://www.ebi.ac.uk/efo/EFO_0001494
CHEBI:3139
C55H84N17O21S3
bleomycin A2
N(1)-[3-(dimethylsulfonio)propyl]bleomycinamide
James Malone
segmentation 5-9 somites
ZFS:0000024
potassium bromate
02/01/7758
Bandrowski's base
20048-27-5
24031
44031
C18H18N6
N1,N1'-(2,5-diaminocyclohexa-2,5-diene-1,4-diylidene)dibenzene-1,4-diamine
Schwefeldioxid
http://www.ebi.ac.uk/efo/EFO_0001619
A sulfur oxide that has formula O2S.
sulfurous anhydride
Schwefel(IV)-oxid
sulphur dioxide
Sulfur dioxide
dioxidosulfur
O2S
O=S=O
InChIKey=RAHZWNYVWXNFOC-UHFFFAOYAT
SO2
CHEBI:18422
InChI=1/O2S/c1-3-2
sulfurous oxide
oxosulfane oxide
Ele Holloway
James Malone
Tomasz Adamusiak
benserazide
CASRN:14919-77-8
Ele Holloway
James Malone
S1
James Malone
myelodysplastic syndrome
Ele Holloway
James Malone
HPAC
Ele Holloway
James Malone
GA10
sense organ[accessedResource: MAT:0000031][accessDate: 04-11-2010]
AAO:0000555
central caudal thalamic nucleus[accessedResource: TAO:0000182][accessDate: 04-11-2010]
ZFA:0000282
Multicellular anatomical structure with largely bona fide boundary that transduces some sensory stimulus to the nervous system.
sensory system
TAO:0000182
WBbt:0005832
central posterior thalamic nucleus
central caudal thalamic nucleus
MA:0002442
sensory systems[accessedResource: ZFA:0000282][accessDate: 04-11-2010]
James Malone
sensory systems
FBbt:00005155
MAT:0000031
sense organ
Multicellular anatomical structure with largely bona fide boundary that transduces some sensory stimulus to the nervous system.[accessedResource: FBbt:00005155][accessDate: 04-11-2010]
central posterior thalamic nucleus[accessedResource: TAO:0000182][accessDate: 04-11-2010]
MFO:0003460
acrylamide
20027
27
79-06-1
C3H5NO
acrylamide
Tomasz Adamusiak
lateral ethmoid
ZFA:0000226
mammary gland cell line
CHEBI:48354
James Malone
http://www.ebi.ac.uk/efo/EFO_0001876
polar solvent
C5H11NO2S
metionina
A sulfur-containing amino acid that has formula C5H11NO2S.
InChI=1/C5H11NO2S/c1-9-3-2-4(6)5(7)8/h4H,2-3,6H2,1H3,(H,7,8)/f/h7H
CSCCC(N)C(O)=O
2-amino-4-(methylthio)butanoic acid
methionine
2-amino-4-(methylsulfanyl)butanoic acid
InChIKey=FFEARJCKVFRZRR-QDQILVOLCH
2-Amino-4-(methylthio)butyric acid
Hmet
Methionin
alpha-amino-gamma-methylmercaptobutyric acid
hindlimb
MAT:0000395
Inferior member[accessedResource: FMAID:7184][accessDate: 04-11-2010]
Either of two extremities of four-footed non-primate land animals. It usually consists of a femur, tibia and fibula, tarsals, metatarsals, and toes.
Lower extremity
James Malone
SAEL:49
BTO:0002345
EHDAA:6094
lower limb[accessedResource: MAT:0000395][accessDate: 04-11-2010]
Inferior member
EV:0100015
XAO:0003031
Either of two extremities of four-footed non-primate land animals. It usually consists of a femur, tibia and fibula, tarsals, metatarsals, and toes.[accessedResource: BTO:0002345][accessDate: 04-11-2010]
Lower extremity[accessedResource: FMAID:7184][accessDate: 04-11-2010]
lower limb
EMAPA:17458
FMAID:7184
MA:0000026
James Malone
gastrula bud
ZFS:0000022
4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone
64091-91-4
MKN7 cell[accessedResource: BTO:0002382][accessDate: 04-11-2010]
Ele Holloway
JCRB1025
MKN-7 cell
MKN7
MKN7 cell
BTO:0002382
Well differentiated human gastric adenocarcinoma cell line.
Well differentiated human gastric adenocarcinoma cell line.[accessedResource: BTO:0002382][accessDate: 04-11-2010]
James Malone
MKN-7 cell[accessedResource: BTO:0002382][accessDate: 04-11-2010]
MKN-7
James Malone
CS57677 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158695&type=germplasm
CS57677
http://www.arabidopsis.org/servlets/TairObject?id=1005158701&type=germplasm
A tetracycline that has formula C22H24N2O8.
Jenacyclin
InChI=1/C22H24N2O8/c1-7-8-5-4-6-9(25)11(8)16(26)12-10(7)17(27)14-15(24(2)3)18(28)13(21(23)31)20(30)22(14,32)19(12)29/h4-7,10,14-15,17,25,27-29,32H,1-3H3,(H2,23,31)/t7-,10+,14+,15-,17-,22-/m0/s1/f/h23H2
Vibramycin
Supracyclin
InChIKey=JBIWCJUYHHGXTC-RFTRKGKODR
[H][C@@]12[C@@H](C)c3cccc(O)c3C(=O)C1=C(O)[C@]1(O)C(=O)C(C(N)=O)=C(O)[C@@H](N(C)C)[C@]1([H])[C@H]2O
C22H24N2O8
5-hydroxy-alpha-6-deoxytetracycline
[H][C@@]12[C@@H](C)c3cccc(O)c3C(=O)C1=C(O)[C@]4(O)C(=O)C(C(N)=O)=C(O)[C@@H](N(C)C)[C@]4([H])[C@H]2O
Doxycyclin
doxycyclinum
doxycycline
http://www.ebi.ac.uk/efo/EFO_0001528
doxiciclina
6alpha-deoxy-5-oxytetracycline
(4S,4aR,5S,5aR,6R,12aS)-4-(dimethylamino)-3,5,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-1,4,4a,5,5a,6,11,12a-octahydrotetracene-2-carboxamide
doxycycline (anhydrous)
CHEBI:50845
systemic lupus erythematosus
EV:0400043
systemic lupus erythematosus
Embryonic endoderm[accessedResource: FMAID:85519][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
definitive endoderm
FMAID:85519
Embryonic endoderm
Occidental[accessedResource: NCIt:C41261][accessDate: 04-11-2010]
NCIt:C41261
Caucasian
Caucasians
Caucasians[accessedResource: NCIt:C41261][accessDate: 04-11-2010]
Jie Zheng
White[accessedResource: NCIt:C41261][accessDate: 04-11-2010]
Caucasoid[accessedResource: NCIt:C41261][accessDate: 04-11-2010]
Caucasoid
Denotes person with European, Middle Eastern, or North African ancestral origin who identifies, or is identified, as White.[accessedResource: NCIt:C41261][accessDate: 04-11-2010]
Whites[accessedResource: NCIt:C41261][accessDate: 04-11-2010]
Denotes person with European, Middle Eastern, or North African ancestral origin who identifies, or is identified, as White.
White
European
Whites
Tomasz Adamusiak
Occidental
Peripheral neuroglial cell[accessedResource: CL:0000218][accessDate: 04-11-2010]
myelinating Schwann cell
Neurilemmal cell
A neuroglial cell of the peripheral nervous system which forms the insulating myelin sheaths of peripheral axons.
James Malone
CL:0000218
Neurilemmal cell[accessedResource: CL:0000218][accessDate: 04-11-2010]
myelinating Schwann cell[accessedResource: CL:0000218][accessDate: 04-11-2010]
Peripheral neuroglial cell
A neuroglial cell of the peripheral nervous system which forms the insulating myelin sheaths of peripheral axons.[accessedResource: CL:0000218][accessDate: 04-11-2010]
Schwann cell
Cutaneous T-cell lymphoma
CTCL
foreign"; bios "life
CHEBI:35703
http://www.ebi.ac.uk/efo/EFO_0001852
A xenobiotic (Greek, xenos "foreign"; bios "life") is a compound that is foreign to a living organism. Principal xenobiotics include: drugs, carcinogens and various compounds that have been introduced into the environment by artificial means.
xenobiotic compounds
xenobiotic
James Malone
xenobiotics
Tomasz Adamusiak
Publication in preparation before submitting to a journal.
in preparation
James Malone
cleavage 64-cell
ZFS:0000007
CHEBI:22333
James Malone
http://www.ebi.ac.uk/efo/EFO_0001816
Highly reactive chemical that introduces alkyl radicals into biologically active molecules and thereby prevents their proper functioning. It could be used as an antineoplastic agent, but it might be very toxic, with carcinogenic, mutagenic, teratogenic, and immunosuppressant actions. It could also be used as a component of poison gases.
alkylating agent
Procedure
Tomasz Adamusiak
SURGICAL AND MEDICAL PROCEDURES
An activity that produces an effect, or that is intended to alter the course of a disease in a patient or population. This is a general term that encompasses the medical, social, behavioral, and environmental acts that can have preventive, therapeutic, or palliative effects.
Procedure[accessedResource: NCIt:C25218][accessDate: 04-11-2010]
Intervention or Procedure
Intervention
NCIt:C25218
Intervention Strategies[accessedResource: NCIt:C25218][accessDate: 04-11-2010]
Interventional
medical procedure
Intervention Strategies
Intervention[accessedResource: NCIt:C25218][accessDate: 04-11-2010]
Interventional[accessedResource: NCIt:C25218][accessDate: 04-11-2010]
An activity that produces an effect, or that is intended to alter the course of a disease in a patient or population. This is a general term that encompasses the medical, social, behavioral, and environmental acts that can have preventive, therapeutic, or palliative effects.[accessedResource: NCIt:C25218][accessDate: 04-11-2010]
SURGICAL AND MEDICAL PROCEDURES[accessedResource: NCIt:C25218][accessDate: 04-11-2010]
Intervention or Procedure[accessedResource: NCIt:C25218][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
neural crest diencephalon
ZFA:0000811
SKIN AND SUBCUTANEOUS TISSUE DISORDERS
Skin Diseases and Manifestations[accessedResource: NCIt:C3371][accessDate: 04-11-2010]
skin disease
Cutaneous Disorder[accessedResource: NCIt:C3371][accessDate: 04-11-2010]
Skin Disorder[accessedResource: NCIt:C3371][accessDate: 04-11-2010]
James Malone
Any deviation from the normal structure or function of the skin or subcutaneous tissue that is manifested by a characteristic set of symptoms and signs.[accessedResource: NCIt:C3371][accessDate: 04-11-2010]
NCIt:C3371
Cutaneous Disorder
Skin Diseases and Manifestations
Any deviation from the normal structure or function of the skin or subcutaneous tissue that is manifested by a characteristic set of symptoms and signs.
Skin Disorder
SKIN AND SUBCUTANEOUS TISSUE DISORDERS[accessedResource: NCIt:C3371][accessDate: 04-11-2010]
C(Nc1ncnc2[nH]cnc12)c1ccccc1
6-BAP
N-benzyladenine
N6-Benzyladenine
Cytokinin B
C12H11N5
N(6)-(benzylamino)purine
6-[(phenylmethyl)amino]-9H-purine
N-BENZYL-9H-PURIN-6-AMINE
http://www.ebi.ac.uk/efo/EFO_0001577
InChIKey=NWBJYWHLCVSVIJ-YENFCIRVCT
BAP
6-(benzylamino)purine
benzyladenine
InChI=1/C12H11N5/c1-2-4-9(5-3-1)6-13-11-10-12(15-7-14-10)17-8-16-11/h1-5,7-8H,6H2,(H2,13,14,15,16,17)/f/h13,15H
CHEBI:29022
A 6-aminopurine that has formula C12H11N5.
Tomasz Adamusiak
metapterygoid
ZFA:0000240
James Malone
CS57615 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158639&type=germplasm
CS57615
http://www.arabidopsis.org/servlets/TairObject?id=1005158639&type=germplasm
25-Deoxycedysterone
http://www.ebi.ac.uk/efo/EFO_0001594
(22R)-2beta,3beta,14,20,22-pentahydroxy-5beta-cholest-7-en-6-one
[H][C@]12CC[C@]3(C)[C@]([H])(CC[C@@]3(O)C1=CC(=O)[C@]1([H])C[C@@H](O)[C@@H](O)C[C@]21C)[C@@](C)(O)[C@H](O)CCC(C)C
C27H44O6
ponasterone A
A 14alpha-hydroxy steroid that has formula C27H44O6.
InChIKey=PJYYBCXMCWDUAZ-JJJZTNILBL
InChI=1/C27H44O6/c1-15(2)6-7-23(31)26(5,32)22-9-11-27(33)17-12-19(28)18-13-20(29)21(30)14-24(18,3)16(17)8-10-25(22,27)4/h12,15-16,18,20-23,29-33H,6-11,13-14H2,1-5H3/t16-,18-,20+,21-,22-,23+,24+,25+,26+,27+/m0/s1
CHEBI:28135
Ele Holloway
James Malone
Tomasz Adamusiak
17-allylaminogeldanamycin
CASRN:75747-14-7
17-allylamino-geldanamycin; 17-AAG
James Malone
GM12874
BTO:0000135
Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery. Kimmel et al, 1995.[accessedResource: TAO:0000014][accessDate: 04-11-2010]
Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery.
FMAID:3734
dorsal aortic root[accessedResource: ZFA:0000014][accessDate: 04-11-2010]
Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery. Kimmel et al, 1995.
aorta
James Malone
MAT:0000035
DA
Aortic
Trunk of systemic arterial tree
DA[accessedResource: ZFA:0000014][accessDate: 04-11-2010]
NCIt:C12669
adult aorta
dorsal aorta[accessedResource: ZFA:0000014][accessDate: 04-11-2010]
Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery.[accessedResource: ZFA:0000014][accessDate: 04-11-2010]
The major arterial trunk that carries oxygenated blood from the left ventricle into the ascending aorta behind the heart, the aortic arch, through the thorax as the descending aorta and through the abdomen as the abdominal aorta; it bifurcates into the left and right common iliac arteries.[accessedResource: NCIt:C12669][accessDate: 04-11-2010]
Trunk of systemic arterial tree[accessedResource: FMAID:3734][accessDate: 04-11-2010]
EV:0100027
TADS:0000154
dorsal aorta
XAO:0003010
MA:0000476
The great arterial trunk that carries blood from the heart to be distributed by branch arteries through the body.
Aortic[accessedResource: NCIt:C12669][accessDate: 04-11-2010]
ZFA:0000014
FBbt:00003153
dorsal aortic root
Trunk of aortic tree
TAO:0000014
Trunk of aortic tree[accessedResource: FMAID:3734][accessDate: 04-11-2010]
SAEL:6
adult aorta[accessedResource: FBbt:00003153][accessDate: 04-11-2010]
The major arterial trunk that carries oxygenated blood from the left ventricle into the ascending aorta behind the heart, the aortic arch, through the thorax as the descending aorta and through the abdomen as the abdominal aorta; it bifurcates into the left and right common iliac arteries.
The great arterial trunk that carries blood from the heart to be distributed by branch arteries through the body.[accessedResource: BTO:0000135][accessDate: 04-11-2010]
James Malone
GM12144
Tomasz Adamusiak
rhombomere 5
ZFA:0000823
James Malone
http://www.ebi.ac.uk/efo/EFO_0002638
The Grivet (Chlorocebus aethiops) is an Old World monkey with long white tufts of hair along the sides of the face.
Chlorocebus aethiops
http://en.wikipedia.org/wiki/Grivet
African green monkey
grivet
Tomasz Adamusiak
ILSXISS28/TejJ
http://jaxmice.jax.org/strain/009266.html
Proliferative arthritis
ICD9:714.0
GeneRIF:14505215
GeneRIF:12635863
GeneRIF:12847677
GeneRIF:14726963
GeneRIF:16366416
GeneRIF:15959531
GeneRIF:12718750
GeneRIF:12413610
GeneRIF:16052590
GeneRIF:16320327
GeneRIF:12509789
GeneRIF:12564836
GeneRIF:11708408
GeneRIF:15241467
GeneRIF:12643440
GeneRIF:11922198
GeneRIF:12571842
GeneRIF:12574395
GeneRIF:15632153
GeneRIF:12913926
GeneRIF:12553721
GeneRIF:12175089
GeneRIF:16200608
GeneRIF:16287870
GeneRIF:12097415
GeneRIF:12739037
GeneRIF:12064825
GeneRIF:12233873
rheumatoid arthritis
Rheumatoid arthritis NOS[accessedResource: DOID:7148][accessDate: 04-11-2010]
GeneRIF:12208866
GeneRIF:14687710
GeneRIF:15841095
GeneRIF:11881821
GeneRIF:15794198
GeneRIF:12047361
GeneRIF:16134725
GeneRIF:12235453
GeneRIF:12242722
GeneRIF:15464974
A chronic systemic disease, primarily of the joints, marked by inflammatory changes in the synovial membranes and articular structures, widespread fibrinoid degeneration of the collagen fibers in mesenchymal tissues, and by atrophy and rarefaction of bony structures. Etiology is unknown, but autoimmune mechanisms have been implicated.[accessedResource: MSH:D001172][accessDate: 04-11-2010]
GeneRIF:12233877
GeneRIF:16200580
GeneRIF:12610796
GeneRIF:12847680
GeneRIF:12966588
GeneRIF:12115181
GeneRIF:15083890
GeneRIF:15045639
GeneRIF:15634264
GeneRIF:12444174
DOID:7148
GeneRIF:15170914
GeneRIF:12089610
GeneRIF:12183385
GeneRIF:12793199
GeneRIF:11856352
GeneRIF:12928381
GeneRIF:15313475
Proliferative arthritis[accessedResource: SNOMEDCT:69896004][accessDate: 04-11-2010]
GeneRIF:12039073
GeneRIF:11708406
GeneRIF:12508786
GeneRIF:12209506
GeneRIF:15971427
GeneRIF:12684695
GeneRIF:11733367
NCIt:C27206
RhA - Rheumatoid arthritis[accessedResource: SNOMEDCT:69896004][accessDate: 04-11-2010]
GeneRIF:12168808
GeneRIF:12913922
GeneRIF:15529384
NCIt:C2884
GeneRIF:15569925
SNOMEDCT:287010008
GeneRIF:12119414
GeneRIF:15389525
GeneRIF:15517620
GeneRIF:15753214
GeneRIF:12739786
RA - Rheumatoid arthritis[accessedResource: SNOMEDCT:69896004][accessDate: 04-11-2010]
GeneRIF:15284119
GeneRIF:12759455
GeneRIF:11971877
GeneRIF:15896202
GeneRIF:15641088
GeneRIF:14976209
GeneRIF:15457447
GeneRIF:12060849
GeneRIF:12165497
GeneRIF:14647385
GeneRIF:15248212
GeneRIF:14994383
GeneRIF:11916172
GeneRIF:15077296
GeneRIF:15163116
GeneRIF:15381082
GeneRIF:11920278
GeneRIF:11294880
GeneRIF:15877293
GeneRIF:15031666
GeneRIF:11838837
GeneRIF:12070776
GeneRIF:15077295
GeneRIF:14617033
GeneRIF:16107870
Rheumatoid arthritis (disorder)[accessedResource: SNOMEDCT:69896004][accessDate: 04-11-2010]
GeneRIF:12784383
GeneRIF:15022325
GeneRIF:16151416
GeneRIF:12193472
GeneRIF:15290725
GeneRIF:12508775
GeneRIF:15759013
GeneRIF:12140750
GeneRIF:14984939
GeneRIF:12517948
GeneRIF:12465141
GeneRIF:14994386
GeneRIF:11906819
GeneRIF:16175503
GeneRIF:16127156
GeneRIF:15254248
GeneRIF:12937131
GeneRIF:15593216
GeneRIF:14558087
Rheumatic gout
Arthritis or polyarthritis, rheumatic[accessedResource: DOID:7148][accessDate: 04-11-2010]
GeneRIF:15146416
GeneRIF:15338479
Rheumatoid arthritis NOS
GeneRIF:14707104
GeneRIF:16329077
GeneRIF:12913925
GeneRIF:12571844
GeneRIF:14608356
GeneRIF:13130464
Rheumatic gout[accessedResource: SNOMEDCT:69896004][accessDate: 04-11-2010]
GeneRIF:12193736
MSH:D001172
GeneRIF:15184985
Rheumatoid arthritis NOS (disorder)
GeneRIF:15940757
GeneRIF:12610797
GeneRIF:12782719
GeneRIF:12846065
GeneRIF:15290745
GeneRIF:12826377
GeneRIF:12401808
GeneRIF:15022315
GeneRIF:12847280
Atrophic Arthritis[accessedResource: NCIt:C27206][accessDate: 04-11-2010]
GeneRIF:16142859
GeneRIF:12707342
GeneRIF:12702665
GeneRIF:14558082
GeneRIF:12632415
GeneRIF:15146411
GeneRIF:14532992
GeneRIF:12067756
GeneRIF:15077297
GeneRIF:12734884
GeneRIF:12858434
GeneRIF:15208781
Rheumatoid arthritis is a rheumatologic disorder described as an autoimmune disease that is usually a chronic disease and is characterized especially by pain, stiffness, inflammation, swelling, and sometimes destruction of joints.[accessedResource: DOID:7148][accessDate: 04-11-2010]
GeneRIF:12723989
GeneRIF:11857065
GeneRIF:15638044
GeneRIF:12095257
GeneRIF:15470519
GeneRIF:11961170
GeneRIF:12135431
GeneRIF:11725485
GeneRIF:12114309
GeneRIF:16288117
GeneRIF:14979058
GeneRIF:11983200
GeneRIF:12399463
GeneRIF:12846053
GeneRIF:15007027
GeneRIF:16215318
GeneRIF:12454286
GeneRIF:12697270
GeneRIF:15641073
GeneRIF:15167967
GeneRIF:11949889
Rheumatoid disease[accessedResource: SNOMEDCT:69896004][accessDate: 04-11-2010]
GeneRIF:12846052
GeneRIF:15986374
GeneRIF:11966773
GeneRIF:12528108
GeneRIF:15188353
GeneRIF:15967793
GeneRIF:12054474
GeneRIF:15205567
GeneRIF:12672182
GeneRIF:12905469
RA - Rheumatoid arthritis
GeneRIF:15850806
GeneRIF:15742432
GeneRIF:11466388
James Malone
GeneRIF:12846056
Arthritis or polyarthritis, rheumatic
GeneRIF:12091338
GeneRIF:12823854
GeneRIF:14734742
GeneRIF:15188357
GeneRIF:15743888
GeneRIF:15761492
GeneRIF:15934099
GeneRIF:12114257
GeneRIF:15603867
GeneRIF:12374691
GeneRIF:15751070
GeneRIF:16098099
GeneRIF:15077293
GeneRIF:15325803
GeneRIF:12115177
RhA - Rheumatoid arthritis
atrophic Arthritis
GeneRIF:15457473
Rheumatoid disease
GeneRIF:14578453
GeneRIF:15022344
GeneRIF:15879144
GeneRIF:11801682
GeneRIF:14558083
GeneRIF:15890884
GeneRIF:16002730
GeneRIF:12594835
GeneRIF:15515123
GeneRIF:15146412
GeneRIF:15723199
GeneRIF:14630402
GeneRIF:12879272
GeneRIF:14705216
GeneRIF:12705898
GeneRIF:12808103
GeneRIF:15641039
GeneRIF:15290728
GeneRIF:15641066
GeneRIF:11861275
GeneRIF:16014635
GeneRIF:14991531
GeneRIF:12508778
GeneRIF:14872483
GeneRIF:15535837
GeneRIF:15725578
GeneRIF:12651614
GeneRIF:14730602
Rheumatoid arthritis (disorder)
GeneRIF:15794197
GeneRIF:15259375
GeneRIF:12870871
GeneRIF:12070782
GeneRIF:15457444
GeneRIF:11472854
GeneRIF:15591039
Chronic rheumatic arthritis
GeneRIF:12913938
GeneRIF:14749980
GeneRIF:15457442
GeneRIF:16038875
GeneRIF:12115161
GeneRIF:14749527
Rheumatoid arthritis is a rheumatologic disorder described as an autoimmune disease that is usually a chronic disease and is characterized especially by pain, stiffness, inflammation, swelling, and sometimes destruction of joints.
GeneRIF:15859024
Rheumatoid arthritis NOS (disorder)[accessedResource: DOID:7148][accessDate: 04-11-2010]
GeneRIF:15170913
GeneRIF:15022314
GeneRIF:15950180
GeneRIF:15875058
A chronic systemic disease, primarily of the joints, marked by inflammatory changes in the synovial membranes and articular structures, widespread fibrinoid degeneration of the collagen fibers in mesenchymal tissues, and by atrophy and rarefaction of bony structures. Etiology is unknown, but autoimmune mechanisms have been implicated.
GeneRIF:16200584
GeneRIF:12486608
GeneRIF:12847683
GeneRIF:16192646
SNOMEDCT:69896004
Chronic rheumatic arthritis[accessedResource: SNOMEDCT:69896004][accessDate: 04-11-2010]
GeneRIF:12784384
GeneRIF:12847274
GeneRIF:12847682
GeneRIF:16014623
GeneRIF:15272075
GeneRIF:12833157
GeneRIF:14872281
GeneRIF:15022318
CHEBI:35219
James Malone
http://www.ebi.ac.uk/efo/EFO_0001833
plant growth retardant
plant growth inhibitor
plant growth inhibitors
plant growth retardants
Tomasz Adamusiak
pharyngeal pouch 6
ZFA:0001132
Floor of the Mouth[accessedResource: NCIt:C54187][accessDate: 04-11-2010]
The area of the mouth under the ventral surface of the tongue.
The area of the mouth under the ventral surface of the tongue.[accessedResource: NCIt:C54187][accessDate: 04-11-2010]
floor of mouth
NCIt:C54187
James Malone
Floor of the Mouth
cadmium
23940
3940
7440-43-9
Cd
cadmium
Tomasz Adamusiak
entopterygoid
ZFA:0000657
[M]Clear cell adenocarcinoma NOS[accessedResource: SNOMEDCT:189633003][accessDate: 04-11-2010]
GeneRIF:15884099
clear cell adenocarcinoma
GeneRIF:14633622
DOID:4468
[M]Clear cell adenocarcinoma NOS (morphologic abnormality)
A malignant neoplasm composed of glandular epithelial clear cells. Various architectural patterns may be seen, including papillary, tubulocystic, and solid.[accessedResource: NCIt:C3766][accessDate: 04-11-2010]
[M]Clear cell adenocarcinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189633003][accessDate: 04-11-2010]
Clear cell adenocarcinoma (morphologic abnormality)
Clear cell adenocarcinoma, NOS[accessedResource: SNOMEDCT:30546008][accessDate: 04-11-2010]
An adenocarcinoma characterized by the presence of varying combinations of clear and hobnail-shaped tumor cells. There are three predominant patterns described as tubulocystic, solid, and papillary. These tumors, usually located in the female reproductive organs, have been seen more frequently in young women since 1970 as a result of the association with intrauterine exposure to diethylstilbestrol. (From Holland et al., Cancer Medicine, 3d ed)[accessedResource: MSH:D018262][accessDate: 04-11-2010]
NCIt:C3766
Mesonephroid clear cell adenocarcinoma
GeneRIF:14729622
GeneRIF:12937142
An adenocarcinoma characterized by the presence of varying combinations of clear and hobnail-shaped tumor cells. There are three predominant patterns described as tubulocystic, solid, and papillary. These tumors, usually located in the female reproductive organs, have been seen more frequently in young women since 1970 as a result of the association with intrauterine exposure to diethylstilbestrol. (From Holland et al., Cancer Medicine, 3d ed)
Clear cell adenocarcinoma NOS (morphologic abnormality)
clear cell carcinoma
Clear Cell Adenocarcinomas[accessedResource: MSH:D018262][accessDate: 04-11-2010]
GeneRIF:15297970
A malignant neoplasm composed of glandular epithelial clear cells. Various architectural patterns may be seen, including papillary, tubulocystic, and solid.
Clear cell adenocarcinoma NOS (morphologic abnormality)[accessedResource: DOID:4468][accessDate: 04-11-2010]
Clear cell adenocarcinoma, mesonephroid[accessedResource: SNOMEDCT:30546008][accessDate: 04-11-2010]
Clear cell adenocarcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:30546008][accessDate: 04-11-2010]
GeneRIF:15102668
SNOMEDCT:30546008
Mesonephroid Clear cell carcinoma[accessedResource: DOID:4468][accessDate: 04-11-2010]
GeneRIF:14722919
GeneRIF:15489654
Clear cell adenocarcinoma, NOS
[M]Clear cell adenocarcinoma NOS
GeneRIF:14559803
MSH:D018262
Mesonephroid Clear cell carcinoma
GeneRIF:12086860
SNOMEDCT:189633003
Clear Cell Adenocarcinomas
Clear cell carcinoma[accessedResource: SNOMEDCT:30546008][accessDate: 04-11-2010]
GeneRIF:12970394
James Malone
uterine carcinoma
James Malone
GM12812
Tomasz Adamusiak
axial vasculature
ZFA:0001073
Ele Holloway
James Malone
4483
Clear cell carcinoma of kidney (disorder)
Hypernephromas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Conventional (Clear Cell) Renal Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Clear Cell Carcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Conventional (Clear Cell) Renal Cell Adenocarcinoma
Tumor, Grawitz
Hypernephromas
Kidney Clear Cell Carcinoma
Kidney Clear Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Sarcomatoid Renal Cell Carcinoma
conventional (Clear cell) renal cell carcinoma[accessedResource: DOID:4467][accessDate: 10-05-2010]
Clear cell carcinoma of kidney is a renal cell carcinoma described as the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
Carcinoma, Renal Cell
James Malone
Conventional Renal Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Clear Cell Carcinoma of the Kidney
Adenocarcinoma, Renal Cell
Papillary Renal Cell Carcinoma
Adenocarcinoma of kidney
DOID:4467
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
obsolete_renal clear cell carcinoma
Renal Cell Carcinomas
Hypernephroid Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Nephroid Carcinomas
Papillary Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinoma, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophobe Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Cell Adenocarcinomas
Clear Cell Adenocarcinoma of the Kidney
duplicate of EFO_0000349 (clear cell renal carcinoma)
GeneRIF:15062033
Renal Cell Adenocarcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Hypernephroma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Clear Cell Renal Cell Carcinoma
Carcinomas, Collecting Duct (Kidney)
Adenocarcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Grawitz tumour[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
SNOMEDCT:254915003
GeneRIF:14550470
Carcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Clear Cell Adenocarcinoma, Kidney
Hypernephroma
Clear Cell Renal Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Carcinoma of kidney
Renal Clear Cell Carcinoma
Hypernephroid Carcinoma
Carcinoma, Nephroid
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.[accessedResource: MSH:D002292][accessDate: 10-05-2010]
1.8
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.[accessedResource: DOID:4467][accessDate: 10-05-2010]
Clear cell carcinoma of kidney (disorder)[accessedResource: DOID:4467][accessDate: 10-05-2010]
Clear cell carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
Collecting Duct Carcinomas (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:12576453
clear cell carcinoma of kidney
Clear Cell Renal Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.
Grawitz tumour
GeneRIF:15709172
Hypernephroid Carcinomas
Renal Clear Cell Adenocarcinoma
Clear Cell Adenocarcinoma of Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Sarcomatoid Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephroid Carcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinomas, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Clear Cell Adenocarcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
true
conventional renal cell carcinoma
Grawitz Tumor[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Kidney Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
conventional (Clear cell) renal cell carcinoma
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.
Chromophobe Renal Cell Carcinoma
MSH:D002292
Carcinomas, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
NCIt:C4033
Adenocarcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Duct Carcinoma, Collecting (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Clear Cell Adenocarcinoma of Kidney
Carcinoma, Collecting Duct (Kidney)
A cell found predominately in the blood.[accessedResource: CL:0000081][accessDate: 04-11-2010]
CL:0000988
A blood cell.[accessedResource: BTO:0000574][accessDate: 04-11-2010]
blood cell[accessedResource: CL:0000081][accessDate: 04-11-2010]
haematopoietic cell[accessedResource: CL:0000988][accessDate: 04-11-2010]
Tomasz Adamusiak
blood cell
A cell of a hematopoietic lineage.
hematopoietic cell
CL:0000081
A cell found predominately in the blood.
hemopoietic cell
A blood cell.
haemopoietic cell
A cell of a hematopoietic lineage.[accessedResource: CL:0000988][accessDate: 04-11-2010]
haemopoietic cell[accessedResource: CL:0000988][accessDate: 04-11-2010]
haematopoietic cell
hemopoietic cell[accessedResource: BTO:0000574][accessDate: 04-11-2010]
BTO:0000574
James Malone
animal fluid
MAT:0000020
James Malone
An assay with input RNA
RNA assay
Tomasz Adamusiak
swim bladder
ZFA:0000076
James Malone
CS57631 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158655&type=germplasm
CS57631
http://www.arabidopsis.org/servlets/TairObject?id=1005158655&type=germplasm
James Malone
CS57790 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158814&type=germplasm
CS57790
http://www.arabidopsis.org/servlets/TairObject?id=1005158814&type=germplasm
Ele Holloway
James Malone
ITM-E6E7
Mus castaneus
http://www.ebi.ac.uk/efo/EFO_0002646
southeastern Asian house mouse
Mus casteneus
James Malone
Mus musculus castaneus
southeast Asian house mouse
Mus musculus castenus
James Malone
http://www.ebi.ac.uk/efo/EFO_0001437
An independent continuant [snap:IndependentContinuant] consisting of a characteristic spatial shape in relation to some arrangement of other continuant [snap:Continuant] entities and of the medium which is enclosed in whole or in part by this characteristic spatial shape. Site [snap:Site] entities are entities that can be occupied by other continuant [snap:Continuant] entities.
true
A site is an entity which consists of a characteristic spatial shape in relation to some arrangement of other material entities.
site
alitretinoin
(9cis)-retinoic acid
08/03/5300
20404
40404
C20H28O2
9-cis retinoic acid
mating type h minus
A S. pombe mating type determined by the mat1-Mc and mat1-Mi on the mat1 locus.
M
MO_407
James Malone
h minus
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mating_type_h_minus
h minus[accessedResource: PATO:0001345][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mating_type_h_minus[accessedResource: MO_407][accessDate: 04-11-2010]
M[accessedResource: PATO:0001345][accessDate: 04-11-2010]
PATO:0001345
A S. pombe mating type determined by the mat1-Mc and mat1-Mi on the mat1 locus.[accessedResource: PATO:0001345][accessDate: 04-11-2010]
h -[accessedResource: PATO:0001345][accessDate: 04-11-2010]
h -
Ele Holloway
James Malone
NCI-H1793
limb skeleton[accessedResource: MAT:0000151][accessDate: 04-11-2010]
James Malone
limb bone
MA:0000688
MAT:0000151
limb skeleton
James Malone
GM11839
http://www.ebi.ac.uk/efo/EFO_0001568
http://www.ebi.ac.uk/efo/EFO_0001624
thiopurines
CHEBI:35666
mercaptopurines
sulfanylpurines
thiopurine
hardware
HardwareType[accessedResource: MO_113][accessDate: 04-11-2010]
MO_113
OBI_0400003
instrument
HardwareType
Jie Zheng
James Malone
Hardware[accessedResource: MO_134][accessDate: 04-11-2010]
Tomasz Adamusiak
true
MO_134
An instrument is a device which provides a mechanical or electronic function.
James Malone
CS57587 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158611&type=germplasm
CS57587
http://www.arabidopsis.org/servlets/TairObject?id=1005158611&type=germplasm
benzene
135
39242
71-43-2
C6H6
benzene
pM
true
picomolar
http://www.ebi.ac.uk/efo/EFO_0001813
James Malone
Tomasz Adamusiak
MO_628
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pM[accessedResource: MO_628][accessDate: 04-11-2010]
A unit of molarity which is equal to 10^[-12] M.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pM
Jie Zheng
Infections, EBV
Human Herpes Virus 4 Infections
GeneRIF:11979459
GeneRIF:12163590
GeneRIF:12050395
Virus Infections, Epstein-Barr
EPSTEIN BARR VIRUS INFECT[accessedResource: MSH:D020031][accessDate: 04-11-2010]
NCIt:C38759
HUMAN HERPES VIRUS 4 INFECT[accessedResource: MSH:D020031][accessDate: 04-11-2010]
GeneRIF:14747531
EBV Infections[accessedResource: MSH:D020031][accessDate: 04-11-2010]
MSH:D020031
Human Herpesvirus 4 Infections[accessedResource: MSH:D020031][accessDate: 04-11-2010]
Infection with human herpesvirus 4 (HERPESVIRUS 4, HUMAN); which may facilitate the development of various lymphoproliferative disorders. These include BURKITT LYMPHOMA (African type), INFECTIOUS MONONUCLEOSIS, and oral hairy leukoplakia (LEUKOPLAKIA, HAIRY).[accessedResource: MSH:D020031][accessDate: 04-11-2010]
Virus Infections, Epstein-Barr[accessedResource: MSH:D020031][accessDate: 04-11-2010]
Tumor Virus Infections
SNOMEDCT:402121009
Epstein-Barr virus infectious disease
GeneRIF:15650182
GeneRIF:15929169
GeneRIF:15170639
GeneRIF:15356108
GeneRIF:14607922
INFECT EPSTEIN BARR VIRUS
Infection with human herpesvirus 4 (HERPESVIRUS 4, HUMAN); which may facilitate the development of various lymphoproliferative disorders. These include BURKITT LYMPHOMA (African type), INFECTIOUS MONONUCLEOSIS, and oral hairy leukoplakia (LEUKOPLAKIA, HAIRY).
Epstein-Barr virus infection
HUMAN HERPES VIRUS 4 INFECT
Tumor Virus Infections[accessedResource: DOID:2938][accessDate: 04-11-2010]
Epstein-Barr virus infection (disorder)
HUMAN HERPESVIRUS 4 INFECT
GeneRIF:15047814
James Malone
Epstein-Barr virus infectious disease[accessedResource: DOID:2938][accessDate: 04-11-2010]
GeneRIF:15324931
Herpesvirus 4 Infections, Human
EBV INFECT[accessedResource: MSH:D020031][accessDate: 04-11-2010]
EBV INFECT
GeneRIF:14747532
HUMAN HERPESVIRUS 4 INFECT[accessedResource: MSH:D020031][accessDate: 04-11-2010]
Epstein-Barr virus infection (disorder)[accessedResource: DOID:2938][accessDate: 04-11-2010]
GeneRIF:15808506
Human Herpes Virus 4 Infections[accessedResource: MSH:D020031][accessDate: 04-11-2010]
GeneRIF:12707047
GeneRIF:15368517
GeneRIF:11813981
EBV Infection
DOID:2938
EBV Infection[accessedResource: NCIt:C38759][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0001582
An anti-inflammatory drug that is not a steroid. In addition to anti-inflammatory actions, non-steroidal anti-inflammatory drugs have analgesic, antipyretic, and platelet-inhibitory actions. They act by blocking the synthesis of prostaglandins by inhibiting cyclooxygenase, which converts arachidonic acid to cyclic endoperoxides, precursors of prostaglandins.
non-steroidal anti-inflammatory drug
NSAID
NSAIDs
non-steroidal anti-inflammatory agent
non-steroidal anti-inflammatory drugs
Tomasz Adamusiak
vagal placode 3
ZFA:0001299
James Malone
hatching pec-fin
ZFS:0000034
The portion of the colon between the left colic flexure and the sigmoid colon at the pelvic brim; the portion of the descending colon lying in the left iliac fossa is sometimes called the iliac colon.
FMAID:14547
descending colon
colon descendens
BTO:0000641
James Malone
colon descendens[accessedResource: BTO:0000641][accessDate: 04-11-2010]
MAT:0000313
The portion of the colon between the left colic flexure and the sigmoid colon at the pelvic brim; the portion of the descending colon lying in the left iliac fossa is sometimes called the iliac colon.[accessedResource: BTO:0000641][accessDate: 04-11-2010]
James Malone
CS57776 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158800&type=germplasm
CS57776
http://www.arabidopsis.org/servlets/TairObject?id=1005158800&type=germplasm
lufenuron
103055-07-8
14357
34357
C17H8Cl2F8N2O3
N-{[2,5-dichloro-4-(1,1,2,3,3,3-hexafluoropropoxy)phenyl]carbamoyl}-2,6-difluorobenzamide
cadmium sulfate
10124-36-4
20229
229
CdO4S
cadmium sulfate
James Malone
A protocol description in which a material separation to recover the nucleic acid fraction of an input material is performed
nucleic acid extraction protocol
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#translational_bias_design[accessedResource: MO_939][accessDate: 04-11-2010]
Tomasz Adamusiak
translational bias design
MO_939
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#translational_bias_design
Tomasz Adamusiak
caudal artery
ZFA:0000011
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hardware_manufacturer[accessedResource: MO_763][accessDate: 04-11-2010]
Tomasz Adamusiak
hardware manufacturer
MO_763
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hardware_manufacturer
An organ of corti derived cell line
James Malone
UBOC1
UBOC-1
James Malone
BEAS-2B
Beas2B
Tomasz Adamusiak
visceral muscle primordium
FBbt:00005519
MO_421
micrometre
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#um[accessedResource: MO_421][accessDate: 04-11-2010]
Jie Zheng
A micrometer is a length unit which is equal to 1m x 10^-6.
Tomasz Adamusiak
A length unit which is equal to one millionth of a meter or 10^[-6] m.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#um
James Malone
micrometer
µm
true
um
http://www.ebi.ac.uk/efo/EFO_0001724
micron
Ele Holloway
James Malone
PEL-5 is a human primary effusion lymphoma cell line
PEL-5
Jie Zheng
Tomasz Adamusiak
embryonic day 14.5
Ele Holloway
hereditary breast ovarian cancer[accessedResource: DOID:5683][accessDate: 04-11-2010]
Familiar breast and Ovarian cancer syndrome
Tomasz Adamusiak
hereditary breast and ovarian cancer
BRCA1
hereditary breast ovarian cancer
Familiar breast and Ovarian cancer syndrome[accessedResource: DOID:5683][accessDate: 04-11-2010]
BRCA1[accessedResource: DOID:5683][accessDate: 04-11-2010]
BRCA2[accessedResource: DOID:5683][accessDate: 04-11-2010]
DOID:5683
BRCA2
James Malone
U266
Ele Holloway
Tomasz Adamusiak
ciglitizone
DSSTox_Generic_SID:40757
STRUCTURE_Formula:C18H23NO3S
ciglitazone
STRUCTURE_ChemicalName_IUPAC:5-{4-[(1-methylcyclohexyl)methoxy]benzyl}-1,3-thiazolidine-2,4-dione
CASRN:74772-77-3
James Malone
DSSTox_CID:20757
Undifferentiated (Embryonal) sarcoma
Embryonal sarcoma[accessedResource: SNOMEDCT:59583009][accessDate: 04-11-2010]
Embryonal sarcoma (morphologic abnormality)
Undifferentiated (Embryonal) Sarcoma[accessedResource: NCIt:C27096][accessDate: 04-11-2010]
A rare malignant tumor of the liver, the incidence of which is highest in children between 6 and 10 years of age.
SNOMEDCT:128734000
James Malone
A rare malignant tumor of the liver, the incidence of which is highest in children between 6 and 10 years of age.[accessedResource: NCIt:C27096][accessDate: 04-11-2010]
DOID:6191
Embryonal sarcoma (morphologic abnormality)[accessedResource: DOID:6191][accessDate: 04-11-2010]
NCIt:C27096
Undifferentiated sarcoma (morphologic abnormality)[accessedResource: DOID:6191][accessDate: 04-11-2010]
Embryonal Sarcoma
Undifferentiated sarcoma (morphologic abnormality)
SNOMEDCT:59583009
undifferentiated sarcoma
Ele Holloway
James Malone
NCI-H2107
James Malone
CD8+
An attribute of a cell e.g. CD8+
cell property
BTO:0002322
Tomasz Adamusiak
non neural ectoderm
ZFA:0001178
Tomasz Adamusiak
NCI-H1299
MCC:0000352
Ele Holloway
James Malone
HPAFII
N-Methylaspartate
InChIKey=HOKKHZGPKSLGJE-VCKMXKKJDP
CN[C@H](CC(O)=O)C(O)=O
C5H9NO4
(R)-2-Methylamino-succinic acid
2-Methylamino-succinic acid
http://www.ebi.ac.uk/efo/EFO_0002731
N-methyl-D-aspartic acid
Methyl aspartic acid
CHEBI:31882
Ele Holloway
N-Methyl-D-aspartate
Tomasz Adamusiak
InChI=1/C5H9NO4/c1-6-3(5(9)10)2-4(7)8/h3,6H,2H2,1H3,(H,7,8)(H,9,10)/t3-/m1/s1/f/h7,9H
N-Methyl aspartic acid
NMDA
An aspartic acid derivative having an N-methyl substituent and D-configuration.
BTO:0001468
xylem
MAT:0000363
GRO:0005352
GRO:0005352[accessedResource: BTO:0001468][accessDate: 04-11-2010]
James Malone
A complex tissue in the vascular system of higher plants that consists of vessels, tracheids, or both usually together with wood fibers and parenchyma cells, functions chiefly in conduction of water and dissolved minerals but also in support and food storage, and typically constitutes the woody element (as of a plant stem).[accessedResource: BTO:0001468][accessDate: 04-11-2010]
PO:0005352
A complex tissue in the vascular system of higher plants that consists of vessels, tracheids, or both usually together with wood fibers and parenchyma cells, functions chiefly in conduction of water and dissolved minerals but also in support and food storage, and typically constitutes the woody element (as of a plant stem).
Ele Holloway
James Malone
Tomasz Adamusiak
aristolochic acid
DSSTox_Generic_SID:C17H11NO7
CASRN:313-67-7
STRUCTURE_Formula:8-methoxy-6-nitrophenanthro[3,4-d][1,3]dioxole-5-carboxylic acid
DSSTox_CID:40969
Ele Holloway
James Malone
NC37
CHEBI:37699
James Malone
http://www.ebi.ac.uk/efo/EFO_0001858
An agent that inhibits protein kinases.
protein kinase inhibitor
protein kinase inhibitors
Ele Holloway
James Malone
CORL105
CORL-105
EMAPA:17270
PNS - parasympathetic
Nervous structures including ganglia outside of the central nervous system.
One of the two divisions of the vertebrate autonomic nervous sytem. Parasympathetic nerves emerge cranially as pre-ganglionic fibres from oculomotor, facial, glossopharyngeal and vagus, and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic acetylcholine receptors. The parasympathetic system innervates, for example, salivary glands, thoracic and abdominal viscera, bladder and genitalia.[accessedResource: BTO:0001833][accessDate: 04-11-2010]
EHDAA:4655
MAT:0000101
FMAID:9907
One of the two divisions of the vertebrate autonomic nervous sytem. Parasympathetic nerves emerge cranially as pre-ganglionic fibres from oculomotor, facial, glossopharyngeal and vagus, and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic acetylcholine receptors. The parasympathetic system innervates, for example, salivary glands, thoracic and abdominal viscera, bladder and genitalia.
ZFA:0000142
BTO:0001833
TAO:0001575
PNS - parasympathetic[accessedResource: MAT:0000101][accessDate: 04-11-2010]
Nervous structures including ganglia outside of the central nervous system.[accessedResource: ZFA:0000142][accessDate: 04-11-2010]
pns[accessedResource: ZFA:0000142][accessDate: 04-11-2010]
MA:0000223
Parasympathetic part of autonomic division of nervous system[accessedResource: FMAID:9907][accessDate: 04-11-2010]
peripheral nervous system
parasympathetic nervous system
pns
Parasympathetic part of autonomic division of nervous system
James Malone
peripheral nervous system[accessedResource: ZFA:0000142][accessDate: 04-11-2010]
Uterine Body[accessedResource: NCIt:C12316][accessDate: 04-11-2010]
Uterine Body
Corpus
corpus uteri
James Malone
The Corpus uteri, or body of uterus, is the part of the uterus above the isthmus, comprising about two thirds of the non-pregnant organ.
The Corpus uteri, or body of uterus, is the part of the uterus above the isthmus, comprising about two thirds of the non-pregnant organ.[accessedResource: NCIt:C12316][accessDate: 04-11-2010]
Uterus, corpus[accessedResource: NCIt:C12316][accessDate: 04-11-2010]
NCIt:C12316
Corpus[accessedResource: NCIt:C12316][accessDate: 04-11-2010]
Uterus, corpus
XAO:0000237
MAT:0000282
BTO:0000620
intestinum ileum[accessedResource: BTO:0000620][accessDate: 04-11-2010]
The last division of the small intestine extending between the jejunum and large intestine.
EV:0100075
intestinum ileum
NCIt:C12387
James Malone
SAEL:53
FMAID:7208
The last division of the small intestine extending between the jejunum and large intestine.[accessedResource: BTO:0000620][accessDate: 04-11-2010]
The final section of the small intestine.
The final section of the small intestine.[accessedResource: NCIt:C12387][accessDate: 04-11-2010]
ileum
MA:0000339
BTO:0000146
The part of the brain composed of the mesencephalon, pons, and medulla oblongata and connecting the spinal cord with the forebrain and cerebrum.[accessedResource: BTO:0000146][accessDate: 04-11-2010]
truncus encephalicus
James Malone
truncus encephalicus[accessedResource: BTO:0000146][accessDate: 04-11-2010]
NIFSTD:birnlex_1565
Tomasz Adamusiak
brain stem
The part of the brain composed of the mesencephalon, pons, and medulla oblongata and connecting the spinal cord with the forebrain and cerebrum.
Ele Holloway
James Malone
SNU423
CHEBI:32918
C12H10O2
naphthalen-1-ylacetic acid
James Malone
A naphthylacetic acid that has formula C12H10O2.
OC(=O)Cc1cccc2ccccc12
1-naphthaleneacetic acid
http://www.ebi.ac.uk/efo/EFO_0002394
alpha-naphthaleneacetic acid
1-naphthylacetic acid
NAA
NAPHTHALEN-1-YL-ACETIC ACID
alpha-NAA
InChI=1/C12H10O2/c13-12(14)8-10-6-3-5-9-4-1-2-7-11(9)10/h1-7H,8H2,(H,13,14)/f/h13H
InChIKey=PRPINYUDVPFIRX-NDKGDYFDCS
naphthalene-1-acetic acid
Ele Holloway
James Malone
GM12751
dibutyl phthalate
1781
21781
84-74-2
C16H22O4
dibutyl phthalate
DBP
James Malone
A temporal mesurement of an occurrence of a metastasis measured from some defined time point.
event distant metastases
pituitary basophilism[accessedResource: DOID:12252][accessDate: 04-11-2010]
Cushing's syndrome NOS (disorder)[accessedResource: DOID:12252][accessDate: 04-11-2010]
Cushing syndrome
Cushing's syndrome NOS[accessedResource: DOID:12252][accessDate: 04-11-2010]
Cushing syndrome is a endocrine syndrome caused by overactivity of the adrenal cortex caused by a tumor of the pituitary gland.[accessedResource: DOID:12252][accessDate: 04-11-2010]
DOID:12252
Cushing's syndrome
Tomasz Adamusiak
Cushing syndrome is a endocrine syndrome caused by overactivity of the adrenal cortex caused by a tumor of the pituitary gland.
Cushing's syndrome NOS (disorder)
Cushing's syndrome[accessedResource: DOID:12252][accessDate: 04-11-2010]
Suprarenogenic syndrome
pituitary basophilism
Cushing's syndrome NOS
hypercorticism
Suprarenogenic syndrome[accessedResource: DOID:12252][accessDate: 04-11-2010]
Leiomyosarcoma, NOS[accessedResource: SNOMEDCT:51549004][accessDate: 04-11-2010]
Leiomyosarcoma, no subtype (morphologic abnormality)[accessedResource: SNOMEDCT:51549004][accessDate: 04-11-2010]
Myxoid Leiomyosarcoma[accessedResource: MSH:D007890][accessDate: 04-11-2010]
leiomyosarcoma NOS (morphologic abnormality)[accessedResource: DOID:1967][accessDate: 04-11-2010]
Leiomyosarcomas, Epithelioid[accessedResource: MSH:D007890][accessDate: 04-11-2010]
Leiomyomosarcoma, no subtype (morphologic abnormality)
NCIt:C3158
LMS - Leiomyosarcoma
GeneRIF:15051038
Epithelioid Leiomyosarcoma
SNOMEDCT:189790006
Leiomyomosarcoma, no subtype (morphologic abnormality)[accessedResource: DOID:1967][accessDate: 04-11-2010]
Leiomyosarcoma, no subtype (morphologic abnormality)
Leiomyosarcoma, NOS
leiomyosarcoma
Myxoid Leiomyosarcomas
GeneRIF:12177782
Leiomyosarcomas
A sarcoma containing large spindle cells of smooth muscle. Although it rarely occurs in soft tissue, it is common in the viscera. It is the most common soft tissue sarcoma of the gastrointestinal tract and uterus. The median age of patients is 60 years. (From Dorland, 27th ed; Holland et al., Cancer Medicine, 3d ed, p1865)[accessedResource: MSH:D007890][accessDate: 04-11-2010]
leiomyosarcoma NOS (morphologic abnormality)
Epithelioid Leiomyosarcoma[accessedResource: MSH:D007890][accessDate: 04-11-2010]
LMS - Leiomyosarcoma[accessedResource: SNOMEDCT:51549004][accessDate: 04-11-2010]
Leiomyosarcoma, Myxoid
Leiomyosarcoma, no subtype[accessedResource: SNOMEDCT:51549004][accessDate: 04-11-2010]
DOID:1967
GeneRIF:15051039
Leiomyosarcomas, Myxoid[accessedResource: MSH:D007890][accessDate: 04-11-2010]
MSH:D007890
Leiomyosarcomas, Epithelioid
GeneRIF:11759055
Leiomyosarcomas[accessedResource: NCIt:C3158][accessDate: 04-11-2010]
James Malone
A malignant smooth muscle cancer that can arise almost anywhere in the body, but is most common in the uterus, abdomen, or pelvis.
A sarcoma containing large spindle cells of smooth muscle. Although it rarely occurs in soft tissue, it is common in the viscera. It is the most common soft tissue sarcoma of the gastrointestinal tract and uterus. The median age of patients is 60 years. (From Dorland, 27th ed; Holland et al., Cancer Medicine, 3d ed, p1865)
[M]Leiomyosarcoma NOS (morphologic abnormality)
SNOMEDCT:51549004
A malignant smooth muscle cancer that can arise almost anywhere in the body, but is most common in the uterus, abdomen, or pelvis.[accessedResource: DOID:1967][accessDate: 04-11-2010]
An uncommon, aggressive malignant smooth muscle neoplasm, usually occurring in post-menopausal women. It is characterized by a proliferation of neoplastic spindle cells. Morphologic variants include epithelioid, granular cell, inflammatory and myxoid leimyosarcomas.[accessedResource: NCIt:C3158][accessDate: 04-11-2010]
[M]Leiomyosarcoma NOS[accessedResource: SNOMEDCT:189790006][accessDate: 04-11-2010]
Leiomyosarcoma, no subtype
An uncommon, aggressive malignant smooth muscle neoplasm, usually occurring in post-menopausal women. It is characterized by a proliferation of neoplastic spindle cells. Morphologic variants include epithelioid, granular cell, inflammatory and myxoid leimyosarcomas.
GeneRIF:15024701
[M]Leiomyosarcoma NOS
[M]Leiomyosarcoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189790006][accessDate: 04-11-2010]
James Malone
embryonic esophagus
FBbt:00005612
James Malone
CFT-2
James Malone
CS57715 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158739&type=germplasm
CS57715
http://www.arabidopsis.org/servlets/TairObject?id=1005158739&type=germplasm
Cubital region[accessedResource: FMAID:24901][accessDate: 04-11-2010]
Tomasz Adamusiak
elbow
FMAID:24901
Cubital region
Helen Parkinson
An array consisting of DNA probes bound to a substrate
DNA array
http://en.wikipedia.org/wiki/DNA_microarray#Uses_and_types
Ele Holloway
James Malone
TT
MAT:0000095
The walking appendages of each segment of the ventral adult external thorax.[accessedResource: FBbt:00004640][accessDate: 04-11-2010]
limb sensu invertebrata
The walking appendages of each segment of the ventral adult external thorax.
adult leg[accessedResource: TGMA:0000164][accessDate: 04-11-2010]
leg
TGMA:0000164
limb sensu invertebrata[accessedResource: MAT:0000095][accessDate: 04-11-2010]
In animals, one of the paired appendages ordinarily used in locomotion and support. In insects, applied only to the three pairs of thoracic legs; in most insects, composed of the coxa, trochanter, femur, tibia, tarsus and posttarsus.[accessedResource: TGMA:0000164][accessDate: 04-11-2010]
FBbt:00004640
invertebrate limb
James Malone
In animals, one of the paired appendages ordinarily used in locomotion and support. In insects, applied only to the three pairs of thoracic legs; in most insects, composed of the coxa, trochanter, femur, tibia, tarsus and posttarsus.
TADS:0000002
invertebrata limb
adult leg
leg[accessedResource: FBbt:00004640][accessDate: 04-11-2010]
A germ layer lying remote from the surface of the embryo that gives rise to internal tissues such as gut.[accessedResource: BTO:0000800][accessDate: 04-11-2010]
Jie Zheng
endoderm
A germ layer lying remote from the surface of the embryo that gives rise to internal tissues such as gut.
FMAID:69071
hypoblast[accessedResource: BTO:0000800][accessDate: 04-11-2010]
Tomasz Adamusiak
hypoblast
BTO:0000800
Ele Holloway
Ramos
James Malone
Ramos cell line is an EBV-negative, HLA class 1 positive B-lymphoblastoid cell line derived from a Burkitt lymphoma
5-HT antagonists
http://www.ebi.ac.uk/efo/EFO_0001875
CHEBI:48279
James Malone
serotonergic antagonist
antiserotonergic agents
5-hydroxytryptamine antagonists
Drugs that bind to but do not activate serotonin receptors, thereby blocking the actions of serotonin or serotonergic agonists.
serotonin antagonists
serotonin blockaders
NCIt:C33203
An epithelium located in the roof, superior conchae, and septum of the nasal cavity. It is formed by ciliated olfactory receptor cells, supporting cells and basal cells. Olfactory glands in the epithelium produce and secrete mucus which forms a layer over the epithelium. The cilia of the receptor cells protrude into the mucous layer where molecular reception with odors occurs and sensory transduction begins.
nasal epithelium
nasal epithelium[accessedResource: BTO:0000108][accessDate: 04-11-2010]
nasal cavity olfactory epithelium
olfactory epithelium
An epithelium located in the roof, superior conchae, and septum of the nasal cavity. It is formed by ciliated olfactory receptor cells, supporting cells and basal cells. Olfactory glands in the epithelium produce and secrete mucus which forms a layer over the epithelium. The cilia of the receptor cells protrude into the mucous layer where molecular reception with odors occurs and sensory transduction begins.[accessedResource: NCIt:C33203][accessDate: 04-11-2010]
Pseudostratified epithelium lining the olfactory region of the nasal cavity, and containing the receptors for the sense of smell.[accessedResource: BTO:0000108][accessDate: 04-11-2010]
Pseudostratified epithelium lining the olfactory region of the nasal cavity, and containing the receptors for the sense of smell.
BTO:0000108
Sensory olfactory epithelium
nasal cavity olfactory epithelium[accessedResource: BTO:0000108][accessDate: 04-11-2010]
olfactory mucosa
FMA:64803
Olfactory sensory epithelium[accessedResource: FMA:64803][accessDate: 04-11-2010]
olfactory mucosa[accessedResource: BTO:0000108][accessDate: 04-11-2010]
James Malone
CHEBI:44185
http://www.ebi.ac.uk/efo/EFO_0001572
CN(Cc1cnc2nc(N)nc(N)c2n1)c1ccc(cc1)C(=O)N[C@@H](CCC(O)=O)C(O)=O
N-[4-[[(2,4-diamino-6-pteridinyl)methyl]methylamino]benzoyl]-L-glutamic acid
Emtexate
N-[(4-{[(2,4-diaminopteridin-6-yl)methyl](methyl)amino}phenyl)carbonyl]-L-glutamic acid
methotrexatum
Ledertrexate
MTX
James Malone
4-amino-10-methylfolic acid
metotrexato
4-amino-N(10)-methylpteroylglutamic acid
C20H22N8O5
Rheumatrex
Trexall
A pteridine that has formula C20H22N8O5.
methotrexate
InChIKey=FBOZXECLQNJBKD-SGDZJVHDDX
InChI=1/C20H22N8O5/c1-28(9-11-8-23-17-15(24-11)16(21)26-20(22)27-17)12-4-2-10(3-5-12)18(31)25-13(19(32)33)6-7-14(29)30/h2-5,8,13H,6-7,9H2,1H3,(H,25,31)(H,29,30)(H,32,33)(H4,21,22,23,26,27)/t13-/m0/s1/f/h25,29,32H,21-22H2
N-(4-{[(2,4-diaminopteridin-6-yl)methyl](methyl)amino}benzoyl)-L-glutamic acid
James Malone
The tough exterior covering of a woody root or stem; specifically: the tissues outside the cambium that include an inner layer especially of secondary phloem and an outer layer of periderm.
The tough exterior covering of a woody root or stem; specifically: the tissues outside the cambium that include an inner layer especially of secondary phloem and an outer layer of periderm.[accessedResource: BTO:0001301][accessDate: 04-11-2010]
PO:0004518
MAT:0000360
bark
BTO:0001301
irradiate
Tomasz Adamusiak
MO_770
The process of treating a material with radiation
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#irradiate
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#irradiate[accessedResource: MO_770][accessDate: 04-11-2010]
Jie Zheng
James Malone
An acinous gland that is about the size and shape of an almond, secretes tears, and is situated laterally and superiorly to the bulb of the eye in a shallow depression on the inner surface of the frontal bone.[accessedResource: BTO:0000044][accessDate: 04-11-2010]
An acinous gland that is about the size and shape of an almond, secretes tears, and is situated laterally and superiorly to the bulb of the eye in a shallow depression on the inner surface of the frontal bone.
tear gland[accessedResource: BTO:0000044][accessDate: 04-11-2010]
NCIt:C12346
BTO:0000044
lacrimal gland
tear gland
James Malone
Paired, almond-shaped exocrine glands situated superior and posterior to each orbit of the eye that produce and secrete the watery serous component of tears.[accessedResource: NCIt:C12346][accessDate: 04-11-2010]
Paired, almond-shaped exocrine glands situated superior and posterior to each orbit of the eye that produce and secrete the watery serous component of tears.
cholesterol ester
James Malone
Natural Language Generator 8th April 2010
An Ara-C-resistant murine leukemia is a cell line.
A b117h, and a b140h are kinds of Ara-C-resistant murine leukemias.
Ara-C-resistant murine leukemia
James Malone
CS57822 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158846&type=germplasm
CS57822
http://www.arabidopsis.org/servlets/TairObject?id=1005158846&type=germplasm
Ele Holloway
James Malone
YCC11
LNCAP
James Malone
Human prostate carcinoma, established from the left supraclavicular lymph node metastasis from a 50-year-old man with prostate carcinoma in 1977; cells were described to be androgen-sensitive.
LNCAP cell[accessedResource: BTO:0001321][accessDate: 04-11-2010]
Ele Holloway
LNCAP cell
MCC:0000290
BTO:0001321
Human prostate carcinoma, established from the left supraclavicular lymph node metastasis from a 50-year-old man with prostate carcinoma in 1977; cells were described to be androgen-sensitive.[accessedResource: BTO:0001321][accessDate: 04-11-2010]
Tomasz Adamusiak
lateral mesenchyme derived from mesoderm
ZFA:0000905
X-linked agammaglobulinemia (disorder)[accessedResource: DOID:14179][accessDate: 04-11-2010]
Bruton agammaglobulinemia tyrosine kinase deficiency[accessedResource: DOID:14179][accessDate: 04-11-2010]
NCIt:C3822
Bruton's agammaglobulinaemia
Bruton's type agammaglobulinemia
Bruton's X-Linked Agammaglobulinemia
X-linked agammaglobulinemia. An immunodeficiency state characterized (usually) by profoundly low concentrations of serum immunoglobulins of all classes, although occasionally significant amounts of one or more isotypes can be found. The fundamental defect in XLA affects early lineage B cells.
BTK deficiency
Bruton's Sex-Linked Agammaglobulinemia[accessedResource: NCIt:C3822][accessDate: 04-11-2010]
Bruton's Sex-Linked Agammaglobulinemia
X-linked agammaglobulinemia. An immunodeficiency state characterized (usually) by profoundly low concentrations of serum immunoglobulins of all classes, although occasionally significant amounts of one or more isotypes can be found. The fundamental defect in XLA affects early lineage B cells.[accessedResource: NCIt:C3822][accessDate: 04-11-2010]
Bruton's X-Linked Agammaglobulinemia[accessedResource: NCIt:C3822][accessDate: 04-11-2010]
X-linked agammaglobulinemia
DOID:14179
BTK deficiency[accessedResource: DOID:14179][accessDate: 04-11-2010]
Tomasz Adamusiak
Bruton's agammaglobulinaemia[accessedResource: DOID:14179][accessDate: 04-11-2010]
Bruton agammaglobulinemia tyrosine kinase deficiency
A B cell deficiency that is caused by a mutation in the Bruton's tyrosine kinase (BTK) gene on the X chromosome resulting in X-linked agammaglobulinemia type 1, which is an immunodeficiency characterized by the failure to produce mature B lymphocytes, and associated with a failure of Ig heavy chain rearrangement.[accessedResource: DOID:14179][accessDate: 04-11-2010]
A B cell deficiency that is caused by a mutation in the Bruton's tyrosine kinase (BTK) gene on the X chromosome resulting in X-linked agammaglobulinemia type 1, which is an immunodeficiency characterized by the failure to produce mature B lymphocytes, and associated with a failure of Ig heavy chain rearrangement.
Bruton's type agammaglobulinemia[accessedResource: DOID:14179][accessDate: 04-11-2010]
X-linked agammaglobulinemia (disorder)
Being approximately average or within certain limits; conforming with or constituting a norm or standard or level or type or social norm.[accessedResource: NCIt:C14165][accessDate: 04-11-2010]
James Malone
A normal class is a special type of disease factor used as a control, that is, one which is not known to be affected by any disease; being approximately average or within certain limits; conforming with or constituting a norm or standard or level or type or social norm.
Being approximately average or within certain limits; conforming with or constituting a norm or standard or level or type or social norm.
normal
NCIt:C14165
Ele Holloway
James Malone
SW403
CHEBI:38147
James Malone
http://www.ebi.ac.uk/efo/EFO_0001866
A drug that has a strengthening effect on the heart or that can increase cardiac output.
cardiotonic drug
cardiotonic drugs
Ele Holloway
Natural Language Generator 8th April 2010
James Malone
A Jiyoye is a cell line.
A Jiyoye is bearer of a Burkitt's lymphoma.
Jiyoye
Tomasz Adamusiak
parachordal vessel
ZFA:0005034
Digital
Digital[accessedResource: NCIt:C40186][accessDate: 10-05-2010]
Duplicated class, use digit EFO_0000881
NCIt:C40186
obsolete_digit
Digit[accessedResource: NCIt:C40186][accessDate: 10-05-2010]
A finger or toe in human beings or corresponding part in other vertebrates.[accessedResource: NCIt:C40186][accessDate: 10-05-2010]
A finger or toe in human beings or corresponding part in other vertebrates.
true
Digit
SAEL:92
adult salivary gland[accessedResource: TGMA:0001804][accessDate: 04-11-2010]
TGMA:0001804
MA:0000346
Lobular organ the parenchyma of which consists of glandular acini which communicate the oral cavity. Examples: parotid gland, sublingual gland, lingual salivary gland.
FBbt:00005382
salivary gland
A pair of salivary glands is present in the thorax, just above the forelegs and flanking the oesophagus. In both sexes of most species each gland normally consists of three lobes, two lateral and one median.
EMAPA:17751
EHDAA:7987
James Malone
TADS:0000119
FMAID:9597
adult salivary gland
BTO:0001203
MAT:0000079
The glands of the oral cavity whose combined secretion constitutes the saliva.
A pair of salivary glands is present in the thorax, just above the forelegs and flanking the oesophagus. In both sexes of most species each gland normally consists of three lobes, two lateral and one median.[accessedResource: TGMA:0001804][accessDate: 04-11-2010]
The glands of the oral cavity whose combined secretion constitutes the saliva.[accessedResource: BTO:0001203][accessDate: 04-11-2010]
phenylephrine
23465
3-[(1R)-1-hydroxy-2-(methylamino)ethyl]phenol
3465
59-42-7
C9H13NO2
James Malone
gastrula shield
ZFS:0000019
CHEBI:15372
BH4
Tetrahydrobiopterin
Ele Holloway
InChI=1/C9H15N5O3/c1-3(15)6(16)4-2-11-7-5(12-4)8(17)14-9(10)13-7/h3-4,6,12,15-16H,2H2,1H3,(H4,10,11,13,14,17)/f/h11,14H,10H2
5,6,7,8-tetrahydrobiopterin
C9H15N5O3
2-amino-6-(1,2-dihydroxypropyl)-5,6,7,8-tetrahydropteridin-4(3H)-one
James Malone
A biopterin that has formula C9H15N5O3.
InChIKey=FNKQXYHWGSIFBK-JFOIYUNLCJ
2-Amino-6-(1,2-dihydroxypropyl)-5,6,7,8-tetrahydoro-4(1H)-pteridinone
CC(O)C(O)C1CNc2nc(N)[nH]c(=O)c2N1
http://www.ebi.ac.uk/efo/EFO_0002397
An organic heteropentacyclic compound that has formula C23H24O8.
wortmannin
James Malone
InChI=1/C23H24O8/c1-10(24)30-13-7-22(2)12(5-6-14(22)25)16-18(13)23(3)15(9-28-4)31-21(27)11-8-29-20(17(11)23)19(16)26/h8,12-13,15H,5-7,9H2,1-4H3/t12-,13+,15+,22-,23-/m0/s1
Ele Holloway
[H][C@@]12CCC(=O)[C@@]1(C)C[C@@H](OC(C)=O)C1=C2C(=O)c2occ3C(=O)O[C@H](COC)[C@@]1(C)c23
CHEBI:52289
C23H24O8
http://www.ebi.ac.uk/efo/EFO_0002494
Wartmannin
InChIKey=QDLHCMPXEPAAMD-QAIWCSMKBP
(1S,6bR,9aS,11R,11bR)-9a,11b-dimethyl-1-[(methyloxy)methyl]-3,6,9-trioxo-1,6,6b,7,8,9,9a,10,11,11b-decahydro-3H-furo[4,3,2-de]indeno[4,5-h]isochromen-11-yl acetate
Either of the paired ducts in the human male that are formed by the junction of the duct from the seminal vesicle with the vas deferens, pass through the prostate, and open into or close to the prostatic utricle.
Either of the paired ducts in the human male that are formed by the junction of the duct from the seminal vesicle with the vas deferens, pass through the prostate, and open into or close to the prostatic utricle.[accessedResource: BTO:0001580][accessDate: 04-11-2010]
EMAPA:19088
James Malone
MAT:0000170
BTO:0001580
ductus ejaculatorius[accessedResource: BTO:0001580][accessDate: 04-11-2010]
FMAID:19325
TADS:0000489
FBbt:00004965
ductus ejaculatorius
ejaculatory duct
Tomasz Adamusiak
presumptive rhombomere 5
ZFA:0001211
true
A dimensionless concentration unit which denotes the volume of the solute in mL per 100 mL of the resulting solution.
volume percent
% (v/v)
volume percentage
James Malone
GM12873
TAO:0001573
James Malone
WBbt:0005332
Ganglion which is located in the trunk.[accessedResource: TAO:0001573][accessDate: 04-11-2010]
Ganglion which is located in the trunk.
body ganglion
trunk ganglion[accessedResource: TAO:0001573][accessDate: 04-11-2010]
trunk ganglion
James Malone
LC2/AD
Kopfkapsel
adult cranium[accessedResource: TGMA:0000003][accessDate: 04-11-2010]
cranial skeleton
Skeletal system which is part of the skull, including the splanchnocranium, chondrocranium, and dermatocranium.[accessedResource: TAO:0000737][accessDate: 04-11-2010]
The sclerotized skull-like part of the head.
EMAPA:17680
adult cranium
Skeletal system that is part of the head, including the splanchnocranium, chondrocranium, and dermatocranium.[accessedResource: ZFA:0000737][accessDate: 04-11-2010]
James Malone
cranium
TGMA:0000003
EHDAA:6029
Skeletal system that is part of the head, including the splanchnocranium, chondrocranium, and dermatocranium.
Skeletal system of head[accessedResource: FMAID:87596][accessDate: 04-11-2010]
The sclerotized skull-like part of the head.[accessedResource: TGMA:0000003][accessDate: 04-11-2010]
cranial skeleton[accessedResource: TAO:0000737][accessDate: 04-11-2010]
skeletal system of head
1: The skull of a vertebrate.n2: The portion of the skull enclosing the brain; the braincase.
head capsule[accessedResource: TGMA:0000003][accessDate: 04-11-2010]
MA:0000316
Kopfkapsel[accessedResource: TGMA:0000003][accessDate: 04-11-2010]
ZFA:0000737
FMAID:87596
craniofacial skeleton bone
skull
head capsule
1: The skull of a vertebrate.n2: The portion of the skull enclosing the brain; the braincase.[accessedResource: BTO:0001295][accessDate: 04-11-2010]
MAT:0000340
Skeletal system which is part of the skull, including the splanchnocranium, chondrocranium, and dermatocranium.
BTO:0001295
skull[accessedResource: TAO:0000737][accessDate: 04-11-2010]
TAO:0000737
Tomasz Adamusiak
ovarian follicle stage III
ZFA:0001266
Tomasz Adamusiak
embryonic cell line
BTO:0000669
methyleugenol
25607
4-allyl-1,2-dimethoxybenzene
5607
93-15-2
C11H14O2
acetic acid
24394
4394
64-19-7
C2H4O2
acetic acid
Tomasz Adamusiak
floor plate
ZFA:0000022
James Malone
hormone role
nutraceutical
Food Supplementation
Nutritional supplement
CHEBI:50733
A product in capsule, tablet or liquid form that provide essential nutrients, such as a vitamin, an essential mineral, a protein, an herb, or similar nutritional substance.
James Malone
Dietary Supplement
http://www.ebi.ac.uk/efo/EFO_0001894
James Malone
A Pseudomonas aeruginosa CF5 infection is a Pseudomonas infection of strain CF5.
Pseudomonas aeruginosa CF5 infection
Y. Apidianakis, M.N. Mindrinos, W. Xiao, G.W. Lau, R.L. Baldini, R.W. Davis and L.G. Rahme, Profiling early infection responses: Pseudomonas aeruginosa eludes host defenses by suppressing antimicrobial peptide gene expression, Proc. Natl. Acad. Sci. USA 102 (2005), pp. 2573-2578
testicle
James Malone
BTO:0001363
testicle[accessedResource: BTO:0001363][accessDate: 04-11-2010]
testiculus[accessedResource: BTO:0001363][accessDate: 04-11-2010]
testiculus
MA:0002765
A typically paired male reproductive gland that produces sperm and that in most mammals is contained within the scrotum at sexual maturity.[accessedResource: BTO:0001363][accessDate: 04-11-2010]
orchis
WBbt:0005321
male gonad
orchis[accessedResource: BTO:0001363][accessDate: 04-11-2010]
testis
SAEL:93
A typically paired male reproductive gland that produces sperm and that in most mammals is contained within the scrotum at sexual maturity.
James Malone
A carrier or inert medium used as a solvent (or diluent) in which some compound is formulated and or administered.
vehicle
James Malone
A brain structure developmental tissue is a nervous system developmental tissue from which mature, fully developed brain structures will emerge during growth of an organism.
brain structure developmental tissue
James Malone
dorsal fin
Dorsal is a geometric modifier describing parts of an organism relating to or situated near or on the back. For example, dorsal fin.
dorsal
MAT:0000487
Erosive gastropathy (disorder)
acute haemorrhagic gastritis
acute gastric mucosal erosion (disorder)
acute hemorrhagic gastritis [dup] (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
Chronic gastritis NOS
acute gastritis without mention of hemorrhage
Chronic gastritis (disorder)
Other specified gastritis (disorder)
acute gastritis with hemorrhage[accessedResource: DOID:4032][accessDate: 04-11-2010]
GeneRIF:12508351
acute gastritis
Erosive Gastritis[accessedResource: DOID:4032][accessDate: 04-11-2010]
CG - Chronic gastritis[accessedResource: SNOMEDCT:8493009][accessDate: 04-11-2010]
gastritis
Erosive gastropathy (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
Other specified gastritis, with hemorrhage
Other specified gastritis, with hemorrhage[accessedResource: DOID:4032][accessDate: 04-11-2010]
Other specified gastritis (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
chronic gastritis
Erosive Gastritis
acute gastritis with hemorrhage
acute Gastritis[accessedResource: DOID:4032][accessDate: 04-11-2010]
GeneRIF:11642721
SNOMEDCT:8493009
James Malone
acute haemorrhagic gastritis[accessedResource: DOID:4032][accessDate: 04-11-2010]
Gastritis (disorder)
acute gastric mucosal erosion (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
Gastritis unspecified (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
Other specified gastritis NOS (disorder)
CG - Chronic gastritis
Other specified gastritis NOS (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
gastritis[accessedResource: DOID:4032][accessDate: 04-11-2010]
GeneRIF:15962365
acute hemorrhagic gastritis (disorder)
Chronic gastritis, NOS[accessedResource: SNOMEDCT:8493009][accessDate: 04-11-2010]
acute hemorrhagic gastritis (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
Gastritis [Ambiguous]
Other specified gastritis, without mention of hemorrhage
acute gastritis (disorder)
chronic gastritis (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
Idiopathic erosive/hemorrhagic gastritis (disorder)
acute gastritis, without mention of hemorrhage[accessedResource: DOID:4032][accessDate: 04-11-2010]
Chronic gastritis NOS (disorder)
GASTRITIS HEMORRHAGIC
acute gastritis (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
acute hemorrhagic gastritis [dup] (disorder)
GASTRITIS HEMORRHAGIC[accessedResource: DOID:4032][accessDate: 04-11-2010]
Gastritis unspecified (disorder)
NCIt:C26929
DOID:4032
Gastritis (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
Idiopathic erosive/hemorrhagic gastritis (disorder)[accessedResource: DOID:4032][accessDate: 04-11-2010]
GeneRIF:12738381
Gastritis [Ambiguous][accessedResource: DOID:4032][accessDate: 04-11-2010]
Other specified gastritis, without mention of hemorrhage[accessedResource: DOID:4032][accessDate: 04-11-2010]
SNOMEDCT:196736000
Chronic gastritis NOS (disorder)[accessedResource: SNOMEDCT:196736000][accessDate: 04-11-2010]
Other specified gastritis[accessedResource: DOID:4032][accessDate: 04-11-2010]
Other specified gastritis
GeneRIF:15104366
James Malone
Syracuse Low Avoidance
RGD:1578703
Natural Language Generator 8th April 2010
Ele Holloway
BDCM
James Malone
A BDCM is a cell line.
A BDCM is all of the following: something that is bearer of an acute myeloid leukemia, something that derives from a homo sapiens, and something that derives from a lymphatic system.
James Malone
carmoxirole hydrochloride
Ele Holloway
CASRN:98323-83-2
STRUCTURE_Formula:C24H27ClN2O2
STRUCTURE_ChemicalName_IUPAC:3-[4-(4-phenyl-3,6-dihydropyridin-1(2H)-yl)butyl]-1H-indole-5-carboxylic acid hydrochloride
Tomasz Adamusiak
DSSTox_Generic_SID:42595
3-[4-(3,6-dihydro-4-phenyl-1(2H)-pyridinyl)butyl]-1H-in dole-5-carboxylic acid hydrochloride
DSSTox_CID:22595
James Malone
The probabilty of continuance of life or existence especially under adverse conditions; Probably need a parent survival metric or similar
survival probability
microspore
pollen grain
PO:0020097
generative cell (male)[accessedResource: MAT:0000216][accessDate: 04-11-2010]
James Malone
MAT:0000216
generative cell (male)
The structure into which a haploid microspore develops; contains a halpoid tube nucleus and two haploid sperm nuclei at maturity.[accessedResource: BTO:0001097][accessDate: 04-11-2010]
microspore[accessedResource: CL:0000252][accessDate: 04-11-2010]
GRO:0005650[accessedResource: BTO:0001097][accessDate: 04-11-2010]
The structure into which a haploid microspore develops; contains a halpoid tube nucleus and two haploid sperm nuclei at maturity.
A haploid (1n) spore developing into a male gametophyte in heterosporous plants; the uninucleate pollen grain in seed plants.
A haploid (1n) spore developing into a male gametophyte in heterosporous plants; the uninucleate pollen grain in seed plants.[accessedResource: CL:0000252][accessDate: 04-11-2010]
Tomasz Adamusiak
BTO:0001097
GRO:0005650
CL:0000252
pollen
pollen grain[accessedResource: BTO:0001097][accessDate: 04-11-2010]
benzene-1,2,4-triol
20930
40930
533-73-3
C6H6O3
benzene-1,2,4-triol
1,2,4-benzenetriol
FBbt:00001778
Dorsal imaginal disc of the mesothorax. Precursor of dorsal mesothoracic structures of the adult including the postnotum, scutum, scutellum, wing, wing hinge and part of the notal plura.
dorsal mesothoracic disc
James Malone
wing disc
Dorsal imaginal disc of the mesothorax. Precursor of dorsal mesothoracic structures of the adult including the postnotum, scutum, scutellum, wing, wing hinge and part of the notal plura.[accessedResource: FBbt:00001778][accessDate: 04-11-2010]
wing disc[accessedResource: FBbt:00001778][accessDate: 04-11-2010]
C57BL/6J
NIFSTD:birnlex_393
C57BL/6J is a mouse strain as described in Jackson Laboratory http://phenome.jax.org/db/q?rtn=strains/details&strainid=7
James Malone
Tomasz Adamusiak
http://phenome.jax.org/db/q?rtn=strains/details&strainid=7
C57BL6J
C57BL6J[accessedResource: NIFSTD:birnlex_393][accessDate: 04-11-2010]
Helen Parkinson
A tiling array is an array which has short fragments of nucleic acid immobilized on a substrate. These are designed to cover the whole genome of the target species. Tiling arrays are used to determine genome binding in ChIP assays or to identify transcribed regions.
tiling array
http://en.wikipedia.org/wiki/Tiling_array
genome tiling array
The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm.[accessedResource: ZFA:0000117][accessDate: 04-11-2010]
mesendoderm[accessedResource: ZFA:0000117][accessDate: 04-11-2010]
ZFA:0000117
hypoblast
The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm.
The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm. Kimmel et al, 1995.
James Malone
TAO:0000117
mesendoderm
The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm. Kimmel et al, 1995.[accessedResource: TAO:0000117][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0001898
A substance that diminishes the rate of a chemical reaction.
inhibitor
inhibidor
inhibiteur
James Malone
dorsal apodeme specific anlage
FBbt:00005476
Jie Zheng
hemopoietic progenitor cell[accessedResource: CL:0000837][accessDate: 04-11-2010]
hematopoietic multipotent progenitor cell[accessedResource: CL:0000837][accessDate: 04-11-2010]
CL:0000837
MPP[accessedResource: CL:0000837][accessDate: 04-11-2010]
A progenitor cell of any hematopoietic lineage, potentially multipotent.
MPP
Tomasz Adamusiak
A hematopoietic multipotent progenitor cell is multipotent, but not capable of long-term self-renewal. These cells are characterized as lacking lineage cell surface markers and being CD34-positive in both mice and humans.[accessedResource: CL:0000837][accessDate: 04-11-2010]
A hematopoietic multipotent progenitor cell is multipotent, but not capable of long-term self-renewal. These cells are characterized as lacking lineage cell surface markers and being CD34-positive in both mice and humans.
hemopoietic progenitor cell
hematopoietic progenitor cell
hematopoietic multipotent progenitor cell
selenite(2-)
14124-67-5
selenite
Ele Holloway
James Malone
RCHACV
true
duplicated use class EFO_0000906
obsolete_accumbens nucleus
NCIt:C52733
Accumbens Nucleus
Myocardial infarction (disorder)
GeneRIF:16102106
GeneRIF:12452318
GeneRIF:11994975
GeneRIF:14983241
GeneRIF:12860906
GeneRIF:15678273
Myocardial Infarct[accessedResource: MSH:D009203][accessDate: 04-11-2010]
GeneRIF:15883205
SNOMEDCT:22298006
Infarction of heart[accessedResource: SNOMEDCT:22298006][accessDate: 04-11-2010]
GeneRIF:16116695
GeneRIF:11999647
GeneRIF:12392996
GeneRIF:16159602
GeneRIF:12469616
GeneRIF:15466009
Infarctions, Myocardial
GeneRIF:12891167
GeneRIF:15175818
GeneRIF:15256074
GeneRIF:15793582
GeneRIF:12771003
GeneRIF:11858502
Myocardial infarction NOS
GeneRIF:15763077
GeneRIF:12853162
GeneRIF:14530192
GeneRIF:12362496
GeneRIF:15297380
GeneRIF:12805025
GeneRIF:12697693
MI - Myocardial infarction[accessedResource: SNOMEDCT:22298006][accessDate: 04-11-2010]
GeneRIF:14517168
GeneRIF:12663371
GeneRIF:15458948
GeneRIF:15520319
GeneRIF:15808838
GeneRIF:15210453
GeneRIF:14871556
GeneRIF:12746412
GeneRIF:15978110
GeneRIF:15665106
GeneRIF:15170085
GeneRIF:12165563
GeneRIF:15466927
GeneRIF:15754085
GeneRIF:12426569
GeneRIF:15213208
GeneRIF:15931235
Infarcts, Myocardial
Infarction of heart
GeneRIF:16087130
heart attack[accessedResource: DOID:5844][accessDate: 04-11-2010]
Heart attack, NOS[accessedResource: SNOMEDCT:22298006][accessDate: 04-11-2010]
GeneRIF:15201542
GeneRIF:15075297
GeneRIF:15842378
GeneRIF:12514664
GeneRIF:12482844
GeneRIF:12237129
GeneRIF:14717963
GeneRIF:16186408
GeneRIF:12844196
GeneRIF:15467919
Myocardial Infarcts[accessedResource: MSH:D009203][accessDate: 04-11-2010]
GeneRIF:16276010
GeneRIF:15539626
GeneRIF:14770184
GeneRIF:15226628
GeneRIF:14656915
GeneRIF:15140146
GeneRIF:15319210
GeneRIF:12226742
GeneRIF:15376321
myocardial infarction
GeneRIF:12855229
GeneRIF:12898814
GeneRIF:14966366
James Malone
GeneRIF:12615902
GeneRIF:15081319
GeneRIF:14993131
Myocardial Infarct
GeneRIF:14653443
Cardiac infarction, NOS[accessedResource: SNOMEDCT:22298006][accessDate: 04-11-2010]
GeneRIF:14600184
GeneRIF:15681698
GeneRIF:15533863
MSH:D009203
NCIt:C27996
Infarction of heart, NOS
GeneRIF:12070000
DOID:5844
GeneRIF:14556196
GeneRIF:15764682
Cardiac infarction, NOS
MI[accessedResource: NCIt:C27996][accessDate: 04-11-2010]
Infarction of heart, NOS[accessedResource: SNOMEDCT:22298006][accessDate: 04-11-2010]
GeneRIF:15998711
GeneRIF:12081989
Heart attack, NOS
GeneRIF:11871391
GeneRIF:14693682
GeneRIF:14729404
GeneRIF:12483464
GeneRIF:14646971
GeneRIF:12081984
GeneRIF:12011770
GeneRIF:12855673
GeneRIF:14575314
GeneRIF:15520258
GeneRIF:15907784
GeneRIF:11926892
MI, MYOCARDIAL INFARCTION
GeneRIF:12824724
Cardiac infarction[accessedResource: SNOMEDCT:22298006][accessDate: 04-11-2010]
GeneRIF:12855940
GeneRIF:11903359
GeneRIF:15616022
GeneRIF:11834491
GeneRIF:15298543
GeneRIF:15269835
Cardiac infarction
GeneRIF:15583729
GeneRIF:11861414
GeneRIF:15949932
GeneRIF:12969888
GeneRIF:12535806
GeneRIF:12714332
Gross necrosis of the myocardium, as a result of interruption of the blood supply to the area, as in coronary thrombosis.[accessedResource: NCIt:C27996][accessDate: 04-11-2010]
GeneRIF:15009479
GeneRIF:12958147
GeneRIF:12600920
GeneRIF:15140581
GeneRIF:12818419
GeneRIF:12760310
GeneRIF:14581297
GeneRIF:12430844
GeneRIF:15699461
Myocardial infarction (disorder)[accessedResource: DOID:5844][accessDate: 04-11-2010]
GeneRIF:12719858
Myocardial infarction, NOS[accessedResource: SNOMEDCT:22298006][accessDate: 04-11-2010]
GeneRIF:12395208
GeneRIF:12649084
GeneRIF:12514663
Infarctions, Myocardial[accessedResource: MSH:D009203][accessDate: 04-11-2010]
GeneRIF:15129282
Attack - heart
GeneRIF:14986172
GeneRIF:12745799
NECROSIS of the MYOCARDIUM caused by an obstruction of the blood supply to the heart (CORONARY CIRCULATION).[accessedResource: MSH:D009203][accessDate: 04-11-2010]
GeneRIF:15234427
GeneRIF:15193812
GeneRIF:15576653
GeneRIF:12456499
GeneRIF:12819031
GeneRIF:15861005
GeneRIF:11820456
GeneRIF:12535745
GeneRIF:11816707
GeneRIF:14645853
GeneRIF:14500723
GeneRIF:15292372
NECROSIS of the MYOCARDIUM caused by an obstruction of the blood supply to the heart (CORONARY CIRCULATION).
MI
GeneRIF:15150438
GeneRIF:14962947
GeneRIF:11934213
GeneRIF:14575298
GeneRIF:14631138
GeneRIF:15533859
GeneRIF:14652632
Gross necrosis of the myocardium, as a result of interruption of the blood supply to the area, as in coronary thrombosis.
GeneRIF:12200370
Tomasz Adamusiak
ILSXISS7/TejJ
http://jaxmice.jax.org/strain/009259.html
Ele Holloway
James Malone
YCC6
N-acetylcysteine
acetylcysteinum
N-acetyl-L-cysteine
CHEBI:28939
mercapturic acid
CC(=O)N[C@@H](CS)C(O)=O
(R)-mercapturic acid
L-acetylcysteine
(2R)-2-acetylamino-3-sulfanylpropanoic acid
The N-acetylated derivative of natural amino acid L-cysteine.
C5H9NO3S
InChI=1/C5H9NO3S/c1-3(7)6-4(2-10)5(8)9/h4,10H,2H2,1H3,(H,6,7)(H,8,9)/t4-/m0/s1/f/h6,8H
InChIKey=PWKSKIMOESPYIA-JVBVHTJODB
http://www.ebi.ac.uk/efo/EFO_0001576
(R)-2-acetylamino-3-mercaptopropanoic acid
acetilcisteina
An acetylcysteine that has formula C5H9NO3S.
L-alpha-acetamido-beta-mercaptopropionic acid
Acetylcysteine
James Malone
pharyngeal nervous system
MAT:0000341
WBbt:0005440
James Malone
CS57606 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158630&type=germplasm
CS57606
http://www.arabidopsis.org/servlets/TairObject?id=1005158630&type=germplasm
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pathogenicity_design[accessedResource: MO_807][accessDate: 04-11-2010]
Tomasz Adamusiak
pathogenicity design
MO_807
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pathogenicity_design
James Malone
Genetic Diseases are diseases in which inherited genes predispose to increased risk. The genetic disorders associated with cancer often result from an alteration or mutation in a single gene. The diseases range from rare dominant cancer family syndrome to familial tendencies in which low-penetrance genes may interact with other genes or environmental factors to induce cancer. Research may involve clinical, epidemiologic, and laboratory studies of persons, families, and populations at high risk of these disorders.
genetic disorder
NCI Metathesaurus http://ncimeta.nci.nih.gov/MetaServlet/ResultServlet?cui=C0019247 Date Accessed: 30th October 2007
Tomasz Adamusiak
cranial neural crest
ZFA:0001194
James Malone
tiling path by array
An assay in which a tiling path array (where probes are arrayed covering target regions e.g. a genome or chromosome at very high density) is used to identify transcribed regions.
ArrayExpress production team
James Malone
GM07000
I am trying to determine the difference between a process and a behaviour. Is behaviour dancing any different from the process dancing?
James Malone
Fixed action pattern courtship behaviour in Drosophila. Forager behaviour in honey bees.
The actions or reactions of an object or organism, usually in relation to the environment or surrounding world of stimuli. E.g. Fixed action pattern courtship behaviour in Drosophila. Forager behaviour in honey bees.
behavior
behaviour
ICD9:295.80
GeneRIF:16223700
GeneRIF:16152568
GeneRIF:12814864
GeneRIF:15820226
Unspecified schizophrenia
GeneRIF:11840510
GeneRIF:11891283
James Malone
GeneRIF:12270648
GeneRIF:15657645
GeneRIF:11979062
GeneRIF:15162166
Schizophrenic disorders[accessedResource: SNOMEDCT:191526005][accessDate: 04-11-2010]
GeneRIF:15094474
GeneRIF:12082558
Other specified types of schizophrenia, in remission
GeneRIF:14699424
GeneRIF:12808430
GeneRIF:16027740
GeneRIF:15737668
GeneRIF:12634474
A major psychotic disorder characterized by abnormalities in the perception or expression of reality. It affects the cognitive and psychomotor functions. Common clinical signs and symptoms include delusions, hallucinations, disorganized thinking, and retreat from reality.
GeneRIF:14755439
GeneRIF:12145742
GeneRIF:12098102
Unspecified schizophrenia[accessedResource: SNOMEDCT:191528006][accessDate: 04-11-2010]
GeneRIF:12782967
GeneRIF:15670788
Schizophrenic disorders (disorder)[accessedResource: SNOMEDCT:191526005][accessDate: 04-11-2010]
GeneRIF:15756053
GeneRIF:15363474
GeneRIF:14741324
GeneRIF:12627456
GeneRIF:14754787
GeneRIF:16044173
GeneRIF:11807413
GeneRIF:15861039
GeneRIF:12724619
GeneRIF:15660667
GeneRIF:15038995
Other specified types of schizophrenia, unspecified state[accessedResource: ICD9:295.80][accessDate: 04-11-2010]
GeneRIF:15653269
GeneRIF:14642436
GeneRIF:12707930
GeneRIF:15652872
GeneRIF:12867516
GeneRIF:15545978
GeneRIF:12812986
GeneRIF:15824744
GeneRIF:15274033
GeneRIF:15858820
GeneRIF:12436019
GeneRIF:12476323
GeneRIF:16056149
GeneRIF:15261699
GeneRIF:15532024
GeneRIF:12109966
GeneRIF:15953671
GeneRIF:11840505
GeneRIF:15738936
GeneRIF:15184063
GeneRIF:12782962
GeneRIF:16139171
GeneRIF:15318033
GeneRIF:12815739
SNOMEDCT:191528006
GeneRIF:15274030
GeneRIF:14755437
GeneRIF:15271585
GeneRIF:15318026
GeneRIF:15194506
GeneRIF:15219467
GeneRIF:12762588
GeneRIF:12722515
GeneRIF:12474144
GeneRIF:14569272
GeneRIF:15318034
GeneRIF:15917270
GeneRIF:14684465
GeneRIF:12591580
GeneRIF:15274031
GeneRIF:16056147
GeneRIF:15271586
GeneRIF:15211624
Other specified types of schizophrenia, chronic state with acute exacerbation
Other specified types of schizophrenia, subchronic state[accessedResource: ICD9:295.81][accessDate: 04-11-2010]
GeneRIF:15465982
GeneRIF:12782960
GeneRIF:12111645
GeneRIF:15167695
GeneRIF:15939883
GeneRIF:15739191
GeneRIF:12140776
Other specified types of schizophrenia
GeneRIF:12824740
GeneRIF:14699440
Unspecified schizophrenia (disorder)
GeneRIF:15522255
GeneRIF:15362017
GeneRIF:15289817
ICD9:295.9
GeneRIF:15945063
GeneRIF:12960753
GeneRIF:12950712
schizophrenia-1[accessedResource: DOID:5419][accessDate: 04-11-2010]
GeneRIF:11986985
GeneRIF:12496953
GeneRIF:15091314
GeneRIF:15449241
GeneRIF:15820319
GeneRIF:14623376
GeneRIF:12610647
GeneRIF:15707951
Dementia Praecox[accessedResource: NIFSTD:birnlex_2104][accessDate: 04-11-2010]
SNOMEDCT:191526005
GeneRIF:15564895
GeneRIF:15450681
GeneRIF:15114630
GeneRIF:14732600
GeneRIF:14572619
SNOMEDCT:192327003
Other specified types of schizophrenia, subchronic state with acute exacerbation[accessedResource: ICD9:295.83][accessDate: 04-11-2010]
GeneRIF:12082567
GeneRIF:12931209
GeneRIF:15793701
GeneRIF:15464270
GeneRIF:15292665
GeneRIF:15531077
GeneRIF:12808428
GeneRIF:15277408
Other specified types of schizophrenia[accessedResource: ICD9:295.8][accessDate: 04-11-2010]
Schizophrenia NOS[accessedResource: SNOMEDCT:191579000][accessDate: 04-11-2010]
GeneRIF:12207142
SNOMEDCT:191579000
GeneRIF:15248869
SCHIZOPHRENIA NEC-UNSPEC
GeneRIF:15927374
GeneRIF:15882913
GeneRIF:15998189
GeneRIF:15940305
GeneRIF:12497607
GeneRIF:16026766
GeneRIF:15219469
GeneRIF:15940296
ICD9:295.85
Unspecified schizophrenia, unspecified state
GeneRIF:14732589
GeneRIF:14623375
GeneRIF:15838535
SCHIZOPHRENIA NEC-SUBCHR[accessedResource: ICD9:295.81][accessDate: 04-11-2010]
GeneRIF:12815735
GeneRIF:11803513
GeneRIF:12884975
GeneRIF:16084002
Schizophrenic disorders (disorder)
GeneRIF:15647480
GeneRIF:12851458
GeneRIF:12648734
GeneRIF:15705354
GeneRIF:15389752
Schizophrenic Disorder[accessedResource: NIFSTD:birnlex_2104][accessDate: 04-11-2010]
GeneRIF:12643442
GeneRIF:15726117
GeneRIF:14684836
SCHIZO NEC-SUBCHR/EXACER[accessedResource: ICD9:295.83][accessDate: 04-11-2010]
GeneRIF:12911617
GeneRIF:15508520
ICD9:295.83
GeneRIF:15194870
GeneRIF:14767724
GeneRIF:15276698
GeneRIF:15151706
GeneRIF:11922883
GeneRIF:11840500
GeneRIF:12815736
GeneRIF:15694262
SNOMEDCT:58214004
GeneRIF:12149917
GeneRIF:15452587
GeneRIF:11880198
Unspecified schizophrenia, subchronic state with acute exacerbation
GeneRIF:15841096
GeneRIF:11803525
ICD9:295.84
GeneRIF:14532331
GeneRIF:12192610
GeneRIF:14623369
GeneRIF:12691788
GeneRIF:15338334
GeneRIF:15007393
GeneRIF:12815733
GeneRIF:12627459
GeneRIF:15254796
GeneRIF:11959925
SCHIZO NOS-CHR/EXACERB
GeneRIF:14966479
Schizophrenia NOS (disorder)
GeneRIF:14960334
GeneRIF:12399140
GeneRIF:11986986
Schizophrenia NOS (disorder)[accessedResource: SNOMEDCT:191579000][accessDate: 04-11-2010]
GeneRIF:12425946
Unspecified schizophrenia, chronic state with acute exacerbation
SCHIZOPHRENIA NEC-REMISS[accessedResource: ICD9:295.85][accessDate: 04-11-2010]
GeneRIF:15329799
GeneRIF:11702055
ICD9:295.90
ICD9:295.81
GeneRIF:14623370
GeneRIF:12873802
GeneRIF:15211634
GeneRIF:15303101
GeneRIF:15048641
GeneRIF:12874601
GeneRIF:12082559
GeneRIF:15041036
Other specified types of schizophrenia, chronic state[accessedResource: ICD9:295.82][accessDate: 04-11-2010]
GeneRIF:14755438
Schizophrenic disorders
GeneRIF:12149916
GeneRIF:14985387
GeneRIF:16139173
GeneRIF:16039057
GeneRIF:12497630
GeneRIF:15617864
[X]Schizophrenia, unspecified (disorder)
GeneRIF:14509080
GeneRIF:14618545
GeneRIF:14755443
GeneRIF:15124015
GeneRIF:16044171
GeneRIF:15900227
GeneRIF:12399954
GeneRIF:12364586
GeneRIF:12808432
GeneRIF:15098000
GeneRIF:15781144
GeneRIF:15694236
GeneRIF:14729827
Schizophrenia (disorder)
GeneRIF:15631889
GeneRIF:14755440
GeneRIF:11104840
GeneRIF:12506198
GeneRIF:15564899
Dementia Praecox
GeneRIF:15653259
SCHIZO NOS-CHR/EXACERB[accessedResource: ICD9:295.94][accessDate: 04-11-2010]
GeneRIF:12624948
GeneRIF:15124027
GeneRIF:15305151
GeneRIF:15900221
Other specified types of schizophrenia, unspecified state
GeneRIF:12210277
GeneRIF:12605094
GeneRIF:12476325
GeneRIF:15363473
Schizophrenia (disorder)[accessedResource: SNOMEDCT:58214004][accessDate: 04-11-2010]
GeneRIF:15211628
schizophrenia-1
GeneRIF:12898568
GeneRIF:15066891
GeneRIF:15337252
GeneRIF:15219675
Unspecified schizophrenia, chronic state with acute exacerbation[accessedResource: ICD9:295.94][accessDate: 04-11-2010]
Unspecified schizophrenia, unspecified state[accessedResource: ICD9:295.90][accessDate: 04-11-2010]
GeneRIF:15318035
SCHIZOPHRENIA NEC-SUBCHR
GeneRIF:15820227
GeneRIF:14647391
GeneRIF:12799619
GeneRIF:11920853
GeneRIF:12815740
GeneRIF:15340354
GeneRIF:14744462
Unspecified schizophrenia (disorder)[accessedResource: SNOMEDCT:191528006][accessDate: 04-11-2010]
GeneRIF:14582144
GeneRIF:15211629
GeneRIF:15318028
Other specified types of schizophrenia, chronic state with acute exacerbation[accessedResource: ICD9:295.84][accessDate: 04-11-2010]
NIFSTD:birnlex_2104
GeneRIF:12210271
Schizophrenia, NOS
GeneRIF:12605097
GeneRIF:16037677
Tomasz Adamusiak
GeneRIF:12799614
GeneRIF:15768049
GeneRIF:12707933
GeneRIF:12960750
GeneRIF:11959426
GeneRIF:12555232
GeneRIF:15539862
[X]Schizophrenia, unspecified
GeneRIF:15961543
GeneRIF:15660663
GeneRIF:16039051
ICD9:295.93
Other specified types of schizophrenia, subchronic state
Unspecified schizophrenia, subchronic state with acute exacerbation[accessedResource: ICD9:295.93][accessDate: 04-11-2010]
ICD9:295.8
GeneRIF:15221639
GeneRIF:15124004
GeneRIF:15211626
SCHIZOPHRENIA NOS-UNSPEC[accessedResource: ICD9:295.90][accessDate: 04-11-2010]
[X]Schizophrenia, unspecified (disorder)[accessedResource: SNOMEDCT:192327003][accessDate: 04-11-2010]
GeneRIF:15231749
SCHIZO NEC-CHR/EXACERB[accessedResource: ICD9:295.84][accessDate: 04-11-2010]
GeneRIF:15774266
GeneRIF:15048642
GeneRIF:12007452
GeneRIF:15630410
SCHIZO NOS-SUBCHR/EXACER[accessedResource: ICD9:295.93][accessDate: 04-11-2010]
GeneRIF:12921913
GeneRIF:15671176
GeneRIF:16005437
GeneRIF:11803524
schizophrenia
[X]Schizophrenia, unspecified[accessedResource: SNOMEDCT:192327003][accessDate: 04-11-2010]
SCHIZOPHRENIA NEC-CHR
GeneRIF:16046005
GeneRIF:11681838
GeneRIF:15719395
GeneRIF:12140778
GeneRIF:15601604
GeneRIF:12478479
Schizophrenic Disorder
GeneRIF:12402217
ICD9:295
SCHIZO NEC-SUBCHR/EXACER
GeneRIF:11042361
GeneRIF:12218662
GeneRIF:14732601
GeneRIF:12097806
GeneRIF:15768050
GeneRIF:15913964
GeneRIF:15310849
GeneRIF:15305146
GeneRIF:12682740
GeneRIF:15184103
NCIt:C3362
GeneRIF:16011574
Other specified types of schizophrenia, chronic state
GeneRIF:11952921
SCHIZO NEC-CHR/EXACERB
SCHIZOPHRENIA NEC-UNSPEC[accessedResource: ICD9:295.80][accessDate: 04-11-2010]
GeneRIF:15576061
DOID:5419
GeneRIF:15820333
GeneRIF:14639047
GeneRIF:15668720
GeneRIF:15820318
GeneRIF:15211620
GeneRIF:14729256
GeneRIF:16082709
GeneRIF:12363390
GeneRIF:15121479
Other specified types of schizophrenia, subchronic state with acute exacerbation
GeneRIF:12875921
GeneRIF:14732590
GeneRIF:11840504
GeneRIF:14518171
GeneRIF:15197397
GeneRIF:15364420
GeneRIF:12439825
GeneRIF:15522253
ICD9:295.82
GeneRIF:12090821
GeneRIF:14623371
GeneRIF:12815738
GeneRIF:12915235
Other specified types of schizophrenia, in remission[accessedResource: ICD9:295.85][accessDate: 04-11-2010]
GeneRIF:15870291
A major psychotic disorder characterized by abnormalities in the perception or expression of reality. It affects the cognitive and psychomotor functions. Common clinical signs and symptoms include delusions, hallucinations, disorganized thinking, and retreat from reality.[accessedResource: NCIt:C3362][accessDate: 04-11-2010]
GeneRIF:15885920
GeneRIF:14973229
GeneRIF:15009827
GeneRIF:12815737
SCHIZOPHRENIA NEC-REMISS
GeneRIF:14699426
SCHIZOPHRENIA NEC-CHR[accessedResource: ICD9:295.82][accessDate: 04-11-2010]
GeneRIF:11803454
GeneRIF:15913960
SCHIZO NOS-SUBCHR/EXACER
GeneRIF:14623368
GeneRIF:15167690
ICD9:295.94
GeneRIF:15211633
GeneRIF:15564900
GeneRIF:16176390
GeneRIF:12746393
GeneRIF:11807415
GeneRIF:11807409
GeneRIF:12454527
GeneRIF:15362566
GeneRIF:13129656
GeneRIF:12223255
GeneRIF:15091315
SCHIZOPHRENIA NOS-UNSPEC
adult head[accessedResource: TGMA:0000002][accessDate: 04-11-2010]
TGMA:0000002
SAEL:46
Cardinal body part, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with the skull, it is partially surrounded by skin of head. Examples: There is only one head.
The anterior section (tagma) of the insect body bearing the compound eyes, antennae and mouthparts; separated from the thorax by the cervix.[accessedResource: TGMA:0000002][accessDate: 04-11-2010]
FMAID:7154
FBbt:00000004
James Malone
NIFSTD:birnlex_1230
adult head
The upper or anterior division of the animal body that contains the brain, the chief sense organs, and the mouth.
WBbt:0005739
The anterior section (tagma) of the insect body bearing the compound eyes, antennae and mouthparts; separated from the thorax by the cervix.
Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.
BTO:0000282
Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[accessedResource: TAO:0001114][accessDate: 04-11-2010]
Head (volume)
The upper or anterior division of the animal body that contains the brain, the chief sense organs, and the mouth.[accessedResource: BTO:0000282][accessDate: 04-11-2010]
MFO:0001660
Tomasz Adamusiak
EV:0100475
XAO:0003024
MAT:0000294
Head (volume)[accessedResource: FMAID:7154][accessDate: 04-11-2010]
head
TAO:0001114
Tomasz Adamusiak
pericardial cell primordium
FBbt:00005466
Ele Holloway
James Malone
SW684
James Malone
Ele Holloway
CESS
Mucinous Adenocarcinoma of the Colon[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
Colloidal Adenocarcinoma of the Colon[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
An invasive adenocarcinoma of the colon characterized by the presence of pools of extracellular mucin. Malignant glandular epithelial cells are present in the mucin collections. Mucin constitutes more than 50% of the lesion.
Mucinous Adenocarcinoma of Colon
Colon Colloid Adenocarcinoma
Colonic mucinous adenocarcinoma
Colloidal Adenocarcinoma of Colon
Colonic Colloidal Adenocarcinoma[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
James Malone
Colon Colloid Adenocarcinoma[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
DOID:3029
Colloid Adenocarcinoma of Colon
Colloid Adenocarcinoma of Colon[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
Colonic Colloid Adenocarcinoma[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
Colloidal Adenocarcinoma of the Colon
An invasive adenocarcinoma of the colon characterized by the presence of pools of extracellular mucin. Malignant glandular epithelial cells are present in the mucin collections. Mucin constitutes more than 50% of the lesion.[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
Colloidal Adenocarcinoma of Colon[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
Colloidal Colon Adenocarcinoma
Colloidal Colon Adenocarcinoma[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
Colloid Adenocarcinoma of the Colon[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
colon mucinous adenocarcinoma
Mucinous Adenocarcinoma of Colon[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
Colonic Colloid Adenocarcinoma
Colonic Mucinous Adenocarcinoma[accessedResource: NCIt:C7966][accessDate: 04-11-2010]
NCIt:C7966
Colloid Adenocarcinoma of the Colon
Colonic Colloidal Adenocarcinoma
mucinous adenocarcinoma of the colon
A polynucleotide consisting essentially of chains with a repeating backbone of phosphate and ribose units to which nitrogenous bases are attached. RNA is unique among biological macromolecules in that it can encode genetic information, serve as an abundant structural component of cells, and also possesses catalytic activity. (Rieger et al., Glossary of Genetics: Classical and Molecular, 5th ed) (MSH)[accessedResource: NIFSTD:sao1843715402][accessDate: 04-11-2010]
NIFSTD:sao1843715402
James Malone
MO_594
A polynucleotide consisting essentially of chains with a repeating backbone of phosphate and ribose units to which nitrogenous bases are attached. RNA is unique among biological macromolecules in that it can encode genetic information, serve as an abundant structural component of cells, and also possesses catalytic activity. (Rieger et al., Glossary of Genetics: Classical and Molecular, 5th ed) (MSH)
Jie Zheng
RNS
ribose nucleic acid
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#RNA
http://www.ebi.ac.uk/efo/EFO_0001454
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#RNA[accessedResource: MO_594][accessDate: 04-11-2010]
pentosenucleic acids
ribonucleic acid
RNA is a chemical compound which are naturally occurring polyribonucleotides.
Tomasz Adamusiak
High molecular weight, linear polymers, composed of nucleotides containing ribose and linked by phosphodiester bonds; RNA is central to the synthesis of proteins.
RNA
ribonucleic acids
Ribonukleinsaeure
yeast nucleic acid
James Malone
A population in which a grouping of subjects in some study grouped on the basis of the probable outcome of some disease e.g. by gene expression, by physiological indicators etc
prognostic subgroup
Ele Holloway
James Malone
Pt45P1
Ele Holloway
James Malone
SKO007
Ele Holloway
James Malone
NCI-H2228
James Malone
http://www.ebi.ac.uk/efo/EFO_0001683
true
A base unit which is a standardized quantity of an element or compound with uniform composition.
A substance unit is a base unit which is a standardised quantity of an element or compound with uniform composition.
substance unit
UO:0000006
Ele Holloway
James Malone
Tomasz Adamusiak
sodium cholate hydrate
CASRN:206986-87-0
SNOMEDCT:42343007
GeneRIF:14729387
CHF - Congestive heart failure[accessedResource: SNOMEDCT:42343007][accessDate: 04-11-2010]
GeneRIF:14575298
Congetive cardiac failure[accessedResource: DOID:395][accessDate: 04-11-2010]
GeneRIF:12967639
CHF - Congestive heart failure
GeneRIF:12392981
Cardiac Failure Congestive
GeneRIF:12610310
Congestive heart disease[accessedResource: DOID:395][accessDate: 04-11-2010]
Heart Decompensation
GeneRIF:12388270
Decompensation, Heart[accessedResource: MSH:D006333][accessDate: 04-11-2010]
CCF - Congestive cardiac failure
GeneRIF:15704067
Right-Sided Heart Failure
GeneRIF:12135128
GeneRIF:12364464
GeneRIF:12133434
CCF - Congestive cardiac failure[accessedResource: SNOMEDCT:42343007][accessDate: 04-11-2010]
GeneRIF:12376296
Congetive cardiac failure
GeneRIF:15321927
Congestive heart failure (disorder)
NCIt:C3080
Congestive heart disease
A heterogeneous condition in which the heart is unable to pump out sufficient blood to meet the metabolic need of the body. Heart failure can be caused by structural defects, functional abnormalities (VENTRICULAR DYSFUNCTION), or a sudden overload beyond its capacity. Chronic heart failure is more common than acute heart failure which results from sudden insult to cardiac function, such as MYOCARDIAL INFARCTION.[accessedResource: MSH:D006333][accessDate: 04-11-2010]
Congestive heart failure, unspecified
GeneRIF:15458431
Congestive heart failure (disorder)[accessedResource: DOID:395][accessDate: 04-11-2010]
Left Sided Heart Failure[accessedResource: MSH:D006333][accessDate: 04-11-2010]
GeneRIF:15802562
ICD9:428.0
congestive heart failure
Tomasz Adamusiak
GeneRIF:15319210
James Malone
Heart failure accompanied by EDEMA, such as swelling of the legs and ankles and congestion in the lungs.
Heart Failure
Heart failure involving the RIGHT VENTRICLE.
Myocardial Failure
Heart Failure, Right-Sided[accessedResource: MSH:D006333][accessDate: 04-11-2010]
Heart failure caused by dysfunction of the MYOCARDIUM, leading to defective cardiac emptying (contraction) or filling (relaxation).
CHF
1. inadequacy of the heart so that as a pump it fails to maintain the circulation of blood, with the result that congestion and edema develop in the tissues; SEE ALSO forward heart failure, backward heart failure, right ventricular failure, left ventricular failure. SYN cardiac failure, cardiac insufficiency, congestive heart failure, myocardial insufficiency. 2. resulting clinical syndromes including shortness of breath, pitting edema, enlarged tender liver, engorged neck veins, and pulmonary rales in various combinations.
MSH:D006333
GeneRIF:12835956
Heart Failure[accessedResource: MSH:D006333][accessDate: 04-11-2010]
DOID:395
low output heart failure
GeneRIF:15601581
Heart failure accompanied by EDEMA, such as swelling of the legs and ankles and congestion in the lungs.[accessedResource: MSH:D006333][accessDate: 04-11-2010]
GeneRIF:12234945
Failure of the heart to pump a sufficient amount of blood to meet the needs of the body tissues, resulting in tissue congestion and edema. Signs and symptoms include shortness of breath, pitting edema, enlarged tender liver, engorged neck veins, and pulmonary rales.
Cardiac Failure[accessedResource: MSH:D006333][accessDate: 04-11-2010]
GeneRIF:15475532
Left Sided Heart Failure
GeneRIF:12791592
Heart failure involving the RIGHT VENTRICLE.[accessedResource: MSH:D006333][accessDate: 04-11-2010]
CHF NOS[accessedResource: ICD9:428.0][accessDate: 04-11-2010]
Cardiac Failure Congestive[accessedResource: NCIt:C3080][accessDate: 04-11-2010]
Heart failure caused by dysfunction of the MYOCARDIUM, leading to defective cardiac emptying (contraction) or filling (relaxation).[accessedResource: MSH:D006333][accessDate: 04-11-2010]
GeneRIF:14685701
Heart failure involving the LEFT VENTRICLE.[accessedResource: MSH:D006333][accessDate: 04-11-2010]
A heterogeneous condition in which the heart is unable to pump out sufficient blood to meet the metabolic need of the body. Heart failure can be caused by structural defects, functional abnormalities (VENTRICULAR DYSFUNCTION), or a sudden overload beyond its capacity. Chronic heart failure is more common than acute heart failure which results from sudden insult to cardiac function, such as MYOCARDIAL INFARCTION.
Heart failure involving the LEFT VENTRICLE.
Cardiac Failure
CHF NOS
Failure of the heart to pump a sufficient amount of blood to meet the needs of the body tissues, resulting in tissue congestion and edema. Signs and symptoms include shortness of breath, pitting edema, enlarged tender liver, engorged neck veins, and pulmonary rales.[accessedResource: NCIt:C3080][accessDate: 04-11-2010]
CHF[accessedResource: DOID:395][accessDate: 04-11-2010]
GeneRIF:12948841
GeneRIF:11972292
GeneRIF:15007012
Myocardial Failure[accessedResource: MSH:D006333][accessDate: 04-11-2010]
GeneRIF:12468107
Congestive heart failure, unspecified[accessedResource: ICD9:428.0][accessDate: 04-11-2010]
GeneRIF:12133421
GeneRIF:15861037
CASRN:59333-67-4
STRUCTURE_Formula:C17H19ClF3NO
DSSTox_CID:635
fluoxetine hydrochloride
James Malone
DSSTox_Generic_SID:20635
STRUCTURE_ChemicalName_IUPAC:N-methyl-3-phenyl-3-{[4-(trifluoromethyl)phenyl]oxy}propan-1-amine hydrochloride
Ele Holloway
Tomasz Adamusiak
.[accessedResource: FBbt:00005515][accessDate: 04-11-2010]
adult eye primordium early[accessedResource: FBbt:00005515][accessDate: 04-11-2010]
James Malone
.
adult eye primordium
FBbt:00005515
adult eye primordium early
James Malone
The state of being infected such as from the introduction of a foreign agent such as serum, vaccine, antigenic substance or organism.
infection
pituitary placode[accessedResource: ZFA:0001198][accessDate: 04-11-2010]
James Malone
adenohypophyseal placode
ZFA:0001198
pituitary placode
A property of a cell which is no longer pluripotent
differentiated
James Malone
CS57779 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158803&type=germplasm
CS57779
http://www.arabidopsis.org/servlets/TairObject?id=1005158803&type=germplasm
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#array_manufacturer[accessedResource: MO_890][accessDate: 04-11-2010]
Tomasz Adamusiak
array manufacturer
MO_890
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#array_manufacturer
the A. thaliana Ecotype Ler
2.4
MO_71
obsolete_ecotype
Tomasz Adamusiak
true
A biotype resulting from selection in a particular habitat, e.g. the A. thaliana Ecotype Ler
James Malone
Jie Zheng
using strain instead to hang ecotypes off
James Malone
CS57706 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158730&type=germplasm
CS57706
http://www.arabidopsis.org/servlets/TairObject?id=1005158730&type=germplasm
James Malone
CS57826 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158850&type=germplasm
CS57826
http://www.arabidopsis.org/servlets/TairObject?id=1005158850&type=germplasm
James Malone
CS57770 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158794&type=germplasm
CS57770
http://www.arabidopsis.org/servlets/TairObject?id=1005158794&type=germplasm
Ele Holloway
James Malone
OE19
James Malone
U373
BJ
James Malone
BT549
Jie Zheng
Tomasz Adamusiak
a compound or solution for treatment.
A description of the method used to deliver e.g. a compound or solution for treatment.
delivery method
MO_223
James Malone
crystal cell specific anlage
FBbt:00005463
James Malone
embryonic esophageal ganglion
FBbt:00005670
Tomasz Adamusiak
blood island
ZFA:0000094
Ele Holloway
James Malone
NCI-H2081
Fluoro-2,4-dinitrobenzene
2,4-DNFB
CHEBI:53049
Dinitrofluorobenzene
C6H3FN2O4
2,4-Dinitrobenzenefluoride
InChI=1/C6H3FN2O4/c7-5-2-1-4(8(10)11)3-6(5)9(12)13/h1-3H
1-fluoro-2,4-dinitrobenzene
Fluorodinitrobenzene
[O-][N+](=O)c1ccc(F)c(c1)[N+]([O-])=O
1,2,4-Fluorodinitrobenzene
DNFB
Tomasz Adamusiak
DFB
2,4-Dinitrofluorobenzene
2,4-Dinitrophenyl fluoride
FDNB
InChIKey=LOTKRQAVGJMPNV-UHFFFAOYAZ
http://www.ebi.ac.uk/efo/EFO_0002722
Ele Holloway
2,4-Dinitro-1-fluorobenzene
A fluorobenzene compound with two nitro substituents in the 2- and 4-positions.
DSSTox_Generic_SID:41030
Ele Holloway
fenofibric acid
DSSTox_CID:21030
STRUCTURE_Formula:C17H15ClO4
James Malone
Tomasz Adamusiak
CASRN:42017-89-0
STRUCTURE_ChemicalName_IUPAC:2-{4-[(4-chlorophenyl)carbonyl]phenoxy}-2-methylpropanoic acid
uterine sarcoma
Ele Holloway
James Malone
NCI-H1792
Tomasz Adamusiak
thymus primordium
ZFA:0001077
Jie Zheng
Tomasz Adamusiak
true
A process in which the act is intended to modify or alter some other material entity,
treatment
MO_23
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#optimization_design[accessedResource: MO_934][accessDate: 04-11-2010]
Tomasz Adamusiak
optimization design
MO_934
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#optimization_design
James Malone
A caudal ganglionic eminence is a transitory brain structure present in the embryonic and fetal stages of brain development and that is located towards the caudal end.
caudal ganglionic eminence
VIN[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Vulval Intraepithelial Neoplasia[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Intraepithelial Neoplasia of Vulva
Intraepithelial Neoplasia of the Vulva[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
vulvar intraepithelial neoplasia
Ele Holloway
Dysplasia of Vulva
Dysplasia of the Vulva[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Vulvar Dysplasia[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Dysplasia of Vulva[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Vulva Dysplasia
Vulva Intraepithelial Neoplasia[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Vulval Dysplasia
Intraepithelial Neoplasia of the Vulva
NCIt:C4756
Vulva Dysplasia[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Tomasz Adamusiak
Dysplasia of the Vulva
Vulval Intraepithelial Neoplasia
Vulva Intraepithelial Neoplasia
Vulvar Dysplasia
VIN
Intraepithelial Neoplasia of Vulva[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Vulval Dysplasia[accessedResource: NCIt:C4756][accessDate: 04-11-2010]
Circumventricular organ of neuraxis which is shaped like a pine cone and attached on the midline near the posterior and habenular commissures of the epithalamus.
pineal organ
pineal organ[accessedResource: BTO:0001067][accessDate: 04-11-2010]
pineal gland
FMAID:62033
XAO:0000160
epiphysis cerebri
BTO:0001067
MAT:0000448
pineal body[accessedResource: BTO:0001067][accessDate: 04-11-2010]
A small, cone-shaped organ in the brain of most vertebrates that secretes the hormone melatonin.
epiphysis cerebri[accessedResource: BTO:0001067][accessDate: 04-11-2010]
EV:0100131
A small, cone-shaped organ in the brain of most vertebrates that secretes the hormone melatonin.[accessedResource: BTO:0001067][accessDate: 04-11-2010]
James Malone
pineal body
MA:0000175
MFO:0079940
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#genetic_variation
Tomasz Adamusiak
MO_557
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#genetic_variation[accessedResource: MO_557][accessDate: 04-11-2010]
true
Jie Zheng
genetic factor
http://www.ebi.ac.uk/efo/EFO_0001543
glucitol
CHEBI:30911
C6H14O6
Sorbitol
gulitol
rel-(2R,3R,4R,5S)-hexane-1,2,3,4,5,6-hexol
Ele Holloway
James Malone
JEG3
Ele Holloway
James Malone
WIDR
oseltamivir
196618-13-0
NCIt:C2948
DOID:3594
Chorioepithelioma
Chorioepithelioma NOS
chorioepithelioma[accessedResource: DOID:3594][accessDate: 04-11-2010]
Choriocarcinoma (disorder)[accessedResource: DOID:3594][accessDate: 04-11-2010]
Chorioepithelioma NOS[accessedResource: DOID:3594][accessDate: 04-11-2010]
choriocarcinoma
An aggressive malignant tumor arising from trophoblastic cells. The vast majority of cases arise in the uterus and represent gestational choriocarcinomas that derive from placental trophoblastic cells. Approximately half of the cases develop from a complete hydatidiform mole. A minority of cases arise in the testis or the ovaries. There is often marked elevation of human chorionic gonadotropin (hCG) in the blood. Choriocarcinomas disseminate rapidly through the hematogenous route; the lungs are most frequently affected.[accessedResource: NCIt:C2948][accessDate: 04-11-2010]
Choriocarcinoma (disorder)
Choriocarcinoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:3594][accessDate: 04-11-2010]
Choriocarcinoma, no ICD-O subtype (morphologic abnormality)
An aggressive malignant tumor arising from trophoblastic cells. The vast majority of cases arise in the uterus and represent gestational choriocarcinomas that derive from placental trophoblastic cells. Approximately half of the cases develop from a complete hydatidiform mole. A minority of cases arise in the testis or the ovaries. There is often marked elevation of human chorionic gonadotropin (hCG) in the blood. Choriocarcinomas disseminate rapidly through the hematogenous route; the lungs are most frequently affected.
SCHNEIDER-2 cell[accessedResource: BTO:0001677][accessDate: 04-11-2010]
S2 cell
SCHNEIDER-2 cell
Schneider
Insect - fruitfly (Drosophila melanogaster) cell line, established from the late embryo of a Drosophila melanogaster (fruitfly) in 1972; originally the cells were diploid with 5-10% XY, currently the cell line has only XX cells that are now 60-80% tetraploid.
SCHNEIDER S2 Cell
Schneider's Line S2 cell[accessedResource: BTO:0001677][accessDate: 04-11-2010]
SL2
James Malone
Insect - fruitfly (Drosophila melanogaster) cell line, established from the late embryo of a Drosophila melanogaster (fruitfly) in 1972; originally the cells were diploid with 5-10% XY, currently the cell line has only XX cells that are now 60-80% tetraploid.[accessedResource: BTO:0001677][accessDate: 04-11-2010]
S-2 cell
S-2 cell[accessedResource: BTO:0001677][accessDate: 04-11-2010]
SCHNEIDER S2 Cell[accessedResource: BTO:0001677][accessDate: 04-11-2010]
S2
Schneider's Line S2 cell
BTO:0001677
S2 cell[accessedResource: BTO:0001677][accessDate: 04-11-2010]
mature eosinophil leukocyte[accessedResource: CL:0000041][accessDate: 04-11-2010]
A fully differentiated eosinophil, a granular leukocyte with a nucleus that usually has two lobes connected by one or more slender threads, and cytoplasm containing coarse, round granules that are uniform in size and which can be stained by the dye eosin. Cells are also differentiated from other granulocytes by a small nuclear-to-cytoplasm ratio (1:3). This cell type is CD49d-positive.[accessedResource: CL:0000041][accessDate: 04-11-2010]
mature eosinophil[accessedResource: CL:0000041][accessDate: 04-11-2010]
mature eosinophil
polymorphonuclear leukocyte
James Malone
mature eosinophil leukocyte
mature eosinophil leucocyte[accessedResource: CL:0000041][accessDate: 04-11-2010]
A fully differentiated eosinophil, a granular leukocyte with a nucleus that usually has two lobes connected by one or more slender threads, and cytoplasm containing coarse, round granules that are uniform in size and which can be stained by the dye eosin. Cells are also differentiated from other granulocytes by a small nuclear-to-cytoplasm ratio (1:3). This cell type is CD49d-positive.
mature eosinocyte[accessedResource: CL:0000041][accessDate: 04-11-2010]
PML
PML[accessedResource: BTO:0001026][accessDate: 04-11-2010]
Any fully developed granular leukocyte whose nucleus contains multiple lobes joined by filamentous connections, especially a neutrophil.
Any fully developed granular leukocyte whose nucleus contains multiple lobes joined by filamentous connections, especially a neutrophil.[accessedResource: BTO:0001026][accessDate: 04-11-2010]
A fully differentiated eosinophil, a granular leukocyte with a nucleus that usually has two lobes connected by one or more slender threads of chromatin, and cytoplasm containing coarse, round granules that are uniform in size and which can be stained by the dye eosin.
polymorphonuclear leucocyte
BTO:0001026
CL:0000041
mature eosinocyte
mature eosinophil leucocyte
polymorphonuclear leucocyte[accessedResource: CL:0000041][accessDate: 04-11-2010]
Tomasz Adamusiak
cranial vasculature
ZFA:0001267
FBbt:00005383
The middle part of an alimentary canal.[accessedResource: BTO:0000863][accessDate: 04-11-2010]
midgut
BTO:0000863
The middle part of an alimentary canal.
James Malone
The part of the alimentary canal derived from the endoderm.
The part of the alimentary canal derived from the endoderm.[accessedResource: FBbt:00005383][accessDate: 04-11-2010]
Tomasz Adamusiak
granulosa cell layer
ZFA:0001112
James Malone
true
A dervied mass unit is a derived unit which is a measure of the the amount of matter/energy of a physical object, derived from the base unit for mass.
derived mass unit
PERSON: James Malone
Extra-ocular muscle
Extrinsic muscle of eyeball[accessedResource: FMA:49033][accessDate: 04-11-2010]
FMA:49033
Extra-ocular muscle[accessedResource: FMA:49033][accessDate: 04-11-2010]
Extrinsic muscle of eyeball
BTO:0001579
extraocular muscle
Any of six small voluntary muscles that pass between the eyeball and the orbit and control the movement of the eyeball in relation to the orbit.[accessedResource: BTO:0001579][accessDate: 04-11-2010]
Any of six small voluntary muscles that pass between the eyeball and the orbit and control the movement of the eyeball in relation to the orbit.
Jie Zheng
Tomasz Adamusiak
preoptic area
birn_anat:birnlex_1706
true
Tomasz Adamusiak
F
http://www.ebi.ac.uk/efo/EFO_0001701
Jie Zheng
MO_812
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#degrees_F[accessedResource: MO_812][accessDate: 04-11-2010]
degree fahrenheit
A temperature derived unit which is equal to 5/9ths of a kelvin. Negative 40 degrees Fahrenheit is equal to negative 40 degrees Celsius.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#degrees_F
pancreatic cell
alpha-amanitin
23109-05-9
alpha-amanitine
CC1=C(\\C=C\\C(C)=C\\C=C\\C(C)=C/C(O)=O)C(C)(C)CCC1
13-cis-Vitamin A acid
A retinoic acid that has formula C20H28O2.
isotretinoin
CHEBI:6067
Claravis
Ele Holloway
Amnesteem
C20H28O2
isotretinoinum
Neovitamin A acid
InChIKey=SHGAZHPCJJPHSC-WWZGNHTLDJ
isotretinoine
13-RA
James Malone
Accutane
InChI=1/C20H28O2/c1-15(8-6-9-16(2)14-19(21)22)11-12-18-17(3)10-7-13-20(18,4)5/h6,8-9,11-12,14H,7,10,13H2,1-5H3,(H,21,22)/b9-6+,12-11+,15-8+,16-14-/f/h21H
(2Z,4E6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraenoic acid
(7E,9E,11E,13Z)-retinoic acid
http://www.ebi.ac.uk/efo/EFO_0002411
isotretinoino
13-cis-retinoic acid
testosteronum
Testosteron
InChIKey=MUMGGOZAMZWBJJ-DYKIIFRCBC
[H][C@@]12CCC3=CC(=O)CC[C@]3(C)[C@@]1([H])CC[C@]1(C)[C@@H](O)CC[C@@]21[H]
Androderm
An androstanoid having 17beta-hydroxy and 3-oxo groups, together with unsaturation at C-4-C-5.
InChI=1/C19H28O2/c1-18-9-7-13(20)11-12(18)3-4-14-15-5-6-17(21)19(15,2)10-8-16(14)18/h11,14-17,21H,3-10H2,1-2H3/t14-,15-,16-,17-,18-,19-/m0/s1
(8alpha,10alpha,13alpha,14beta,17alpha)-17-hydroxyandrost-4-en-3-one
James Malone
4-androsten-17beta-ol-3-one
17beta-hydroxy-4-androsten-3-one
testosterone
testosterona
An androgen that has formula C19H28O2.
http://www.ebi.ac.uk/efo/EFO_0001676
C19H28O2
CHEBI:17347
17beta-hydroxyandrost-4-en-3-one
InChIKey=UGFAIRIUMAVXCW-UHFFFAOYAT
http://www.ebi.ac.uk/efo/EFO_0001500
James Malone
carbon(II) oxide
InChI=1/CO/c1-2
A carbon oxide that has formula CO.
CHEBI:17245
carbon monooxide
[CO]
carbon monoxide
Tomasz Adamusiak
Publication submitted to a journal for publication.
submitted
myrcene
123-35-3
25692
5692
7-methyl-3-methyleneocta-1,6-diene
C10H16
MA:0002564
endocrine system[accessedResource: TAO:0001158][accessDate: 04-11-2010]
adult endocrine system[accessedResource: FBbt:00003214][accessDate: 04-11-2010]
adult endocrine system
XAO:0000158
James Malone
MA:0002563
SAEL:37
BTO:0000522
A cell, group of cells, or organ of endothelial origin that selectively removes materials from the blood, concentrates or alters them, and secretes them for further use in the body or for elimination from the body.[accessedResource: BTO:0000522][accessDate: 04-11-2010]
endocrine system
FBbt:00003214
A cell, group of cells, or organ of endothelial origin that selectively removes materials from the blood, concentrates or alters them, and secretes them for further use in the body or for elimination from the body.
gland
SAEL:33
TAO:0001158
TRACT, INFECTION OF URINARY
Tomasz Adamusiak
TRACT, INFECTION OF URINARY[accessedResource: NCIt:C50791][accessDate: 04-11-2010]
NCIt:C50791
A bacterial infectious process affecting any part of the urinary tract, most commonly the bladder and the urethra. Symptoms include urinary urgency and frequency, burning sensation during urination, lower abdominal discomfort, and cloudy urine.[accessedResource: NCIt:C50791][accessDate: 04-11-2010]
urinary tract infection
A bacterial infectious process affecting any part of the urinary tract, most commonly the bladder and the urethra. Symptoms include urinary urgency and frequency, burning sensation during urination, lower abdominal discomfort, and cloudy urine.
Tomasz Adamusiak
vagal ganglion 1
ZFA:0001302
Ele Holloway
James Malone
A172
James Malone
CS57692 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158716&type=germplasm
CS57692
http://www.arabidopsis.org/servlets/TairObject?id=1005158716&type=germplasm
Tomasz Adamusiak
presumptive rhombomere 8
ZFA:0001214
James Malone
An agent that binds to but does not activate adrenergic receptors thereby blocking the actions of endogenous or exogenous adrenergic agonists.
adrenergic receptor blockaders
adrenergic blocker
http://www.ebi.ac.uk/efo/EFO_0001862
adrenoceptor antagonists
adrenergic antagonists
adrenergic blockers
CHEBI:37887
adrenergic blockaders
adrenergic antagonist
James Malone
RKO
Natural Language Generator 8th April 2010
A KELLY is a cell line.
A KELLY is all of the following: something that is bearer of a neuroblastoma, something that derives from a Homo sapiens, and something that derives from a brain.
KELLY
James Malone
Ele Holloway
(+)-dexrazoxane
24584-09-6
Tomasz Adamusiak
primary cell line
James Malone
CS57591 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158615&type=germplasm
CS57591
http://www.arabidopsis.org/servlets/TairObject?id=1005158615&type=germplasm
http://www.ebi.ac.uk/efo/EFO_0001545
glucose
CHEBI:17234
C6H12O6
Glc
Glukose
gluco-hexose
Tomasz Adamusiak
vertical myoseptum
ZFA:0000610
James Malone
CS57740 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158764&type=germplasm
CS57740
http://www.arabidopsis.org/servlets/TairObject?id=1005158764&type=germplasm
Follicular thyroid carcinoma (disorder)[accessedResource: DOID:3962][accessDate: 04-11-2010]
NCIt:C8054
[M]Follicular adenocarcinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189642005][accessDate: 04-11-2010]
NCIt:C27380
Follicular Thyroid Cancer
follicular thyroid carcinoma
Follicular Carcinoma of Thyroid
Follicular carcinoma - well differentiated
Follicular Thyroid Cancer[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
Adenocarcinomas, Follicular[accessedResource: MSH:D018263][accessDate: 04-11-2010]
SNOMEDCT:189642005
SNOMEDCT:28173006
[M]Follicular adenocarcinoma NOS[accessedResource: SNOMEDCT:189642005][accessDate: 04-11-2010]
Well-Differentiated Follicular Adenocarcinoma
MSH:D018263
Follicular carcinoma, well differentiated[accessedResource: SNOMEDCT:28173006][accessDate: 04-11-2010]
SNOMEDCT:5257006
Follicular carcinoma of the Thyroid gland
FTC - Follicular thyroid carcinoma
[M]Follicular carcinoma[accessedResource: SNOMEDCT:189642005][accessDate: 04-11-2010]
Follicular Cancer of the Thyroid Gland[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. The nuclear features which characterise the thyroid gland papillary carcinoma are absent. It is linked to radiation and comprises approximately 10% to 15% of thyroid cancers. Clinically, it usually presents as a solitary mass in the thyroid gland. It is generally unifocal and thickly encapsulated and shows invasion of the capsule or the vessels. Diagnostic procedures include: thyroid function tests, thyroid radioisotope scanning, thyroid ultrasound and fine needle biopsy. Treatment options include: partial or complete thyroidectomy. Adjuvant treatment options include: radioiodine therapy, TSH suppression and external radiation.[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
GeneRIF:14666683
Thyroid Adenocarcinoma
Follicular adenocarcinoma, well differentiated (morphologic abnormality)[accessedResource: SNOMEDCT:28173006][accessDate: 04-11-2010]
An adenocarcinoma of the thyroid gland, in which the cells are arranged in the form of follicles. (From Dorland, 27th ed)[accessedResource: MSH:D018263][accessDate: 04-11-2010]
Follicular Adenocarcinoma
Thyroid Gland Adenocarcinoma[accessedResource: NCIt:C27380][accessDate: 04-11-2010]
Follicular Carcinoma of Thyroid Gland[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
Follicular adenocarcinoma, NOS
Follicular Carcinoma of Thyroid Gland
Follicular Adenocarcinoma[accessedResource: MSH:D018263][accessDate: 04-11-2010]
Follicular adenocarcinoma - well differentiated[accessedResource: SNOMEDCT:28173006][accessDate: 04-11-2010]
GeneRIF:14568171
Follicular carcinoma, NOS[accessedResource: SNOMEDCT:5257006][accessDate: 04-11-2010]
DOID:3962
An adenocarcinoma of the thyroid gland, in which the cells are arranged in the form of follicles. (From Dorland, 27th ed)
An adenocarcinoma arising from the follicular cells of the thyroid gland. According to the degree of differentiation, it is classified either as differentiated carcinoma (extensive evidence of follicular cell differentiation), or poorly differentiated carcinoma (limited evidence of follicular cell differentiation). (NCI05)
FTC - Follicular thyroid carcinoma[accessedResource: SNOMEDCT:255028004][accessDate: 04-11-2010]
Follicular Cancer of the Thyroid[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
Follicular Cancer of Thyroid Gland[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
James Malone
Adenocarcinomas, Follicular
Follicular thyroid carcinoma (disorder)
Thyroid Adenocarcinoma[accessedResource: NCIt:C27380][accessDate: 04-11-2010]
SNOMEDCT:255028004
An adenocarcinoma arising from the follicular cells of the thyroid gland. According to the degree of differentiation, it is classified either as differentiated carcinoma (extensive evidence of follicular cell differentiation), or poorly differentiated carcinoma (limited evidence of follicular cell differentiation). (NCI05)[accessedResource: NCIt:C27380][accessDate: 04-11-2010]
Follicular carcinoma[accessedResource: DOID:3962][accessDate: 04-11-2010]
Follicular Cancer of Thyroid Gland
Follicular Carcinoma of the Thyroid
Follicular Cancer of Thyroid[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
Follicular Carcinoma of the Thyroid[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
Follicular adenocarcinoma (morphologic abnormality)[accessedResource: DOID:3962][accessDate: 04-11-2010]
Follicular Cancer of Thyroid
[M]Follicular adenocarcinoma NOS (morphologic abnormality)
Follicular adenocarcinoma, NOS[accessedResource: SNOMEDCT:5257006][accessDate: 04-11-2010]
Follicular Cancer of the Thyroid Gland
Follicular adenocarcinoma, well differentiated (morphologic abnormality)
Follicular Cancer of the Thyroid
[M]Follicular adenocarcinoma NOS
Follicular adenocarcinoma (morphologic abnormality)
Follicular Thyroid Gland Carcinoma[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
Follicular carcinoma, NOS
[M]Follicular carcinoma
Follicular Carcinoma of Thyroid[accessedResource: NCIt:C8054][accessDate: 04-11-2010]
Thyroid Gland Adenocarcinoma
Follicular carcinoma
A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. The nuclear features which characterise the thyroid gland papillary carcinoma are absent. It is linked to radiation and comprises approximately 10% to 15% of thyroid cancers. Clinically, it usually presents as a solitary mass in the thyroid gland. It is generally unifocal and thickly encapsulated and shows invasion of the capsule or the vessels. Diagnostic procedures include: thyroid function tests, thyroid radioisotope scanning, thyroid ultrasound and fine needle biopsy. Treatment options include: partial or complete thyroidectomy. Adjuvant treatment options include: radioiodine therapy, TSH suppression and external radiation.
Thyroid Gland Follicular Carcinoma
Follicular carcinoma of the Thyroid gland[accessedResource: DOID:3962][accessDate: 04-11-2010]
baicalin
21967-41-9
puromycin
16788
3'-deoxy-N,N-dimethyl-3'-[(O-methyl-L-tyrosyl)amino]adenosine
36788
53-79-2
C22H29N7O5
Tomasz Adamusiak
hyomandibula
ZFA:0000672
James Malone
CS57671 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158695&type=germplasm
CS57671
http://www.arabidopsis.org/servlets/TairObject?id=1005158695&type=germplasm
Ele Holloway
James Malone
MS589
Jie Zheng
Tomasz Adamusiak
distal renal arthery
Burkitt Cell Leukemia
Burkitt Leukemia
GeneRIF:12672960
Burkitt's tumor or lymphoma[accessedResource: DOID:8584][accessDate: 04-11-2010]
Burkitt's lymphoma of unspecified site (disorder)
Lymphoma, Burkitt
Burkitt's Lymphoma
GeneRIF:15061213
Burkitt's lymphoma of unspecified site (disorder)[accessedResource: DOID:8584][accessDate: 04-11-2010]
Burkitt's lymphoma NOS (disorder)[accessedResource: DOID:8584][accessDate: 04-11-2010]
Leukemias, L3 Lymphocytic
Burkitts Leukemia
GeneRIF:12410315
Burkitt lymphoma/leukaemia[accessedResource: DOID:8584][accessDate: 04-11-2010]
small Non-Cleaved cell Lymphoma, Burkitt's type[accessedResource: DOID:8584][accessDate: 04-11-2010]
Burkitt's tumor or lymphoma
Leukemia, Lymphoblastic, Burkitt-Type
Burkitt's lymphoma NOS (disorder)
Leukemia, Burkitt Cell[accessedResource: MSH:D002051][accessDate: 04-11-2010]
Burkitt's lymphoma - disorder[accessedResource: DOID:8584][accessDate: 04-11-2010]
GeneRIF:12604406
Lymphocytic Leukemias, L3[accessedResource: MSH:D002051][accessDate: 04-11-2010]
Burkitts Leukemia[accessedResource: MSH:D002051][accessDate: 04-11-2010]
Leukemia, Lymphoblastic, Burkitt-Type[accessedResource: MSH:D002051][accessDate: 04-11-2010]
A form of undifferentiated malignant LYMPHOMA usually found in central Africa, but also reported in other parts of the world. It is commonly manifested as a large osteolytic lesion in the jaw or as an abdominal mass. B-cell antigens are expressed on the immature cells that make up the tumor in virtually all cases of Burkitt lymphoma. The Epstein-Barr virus (HERPESVIRUS 4, HUMAN) has been isolated from Burkitt lymphoma cases in Africa and it is implicated as the causative agent in these cases; however, most non-African cases are EBV-negative.
GeneRIF:12808131
Burkitts lymphoma
Tumor, Burkitt[accessedResource: MSH:D002051][accessDate: 04-11-2010]
GeneRIF:15384174
GeneRIF:15940251
malignant lymphoma, Burkitt's type
GeneRIF:14980076
Burkitt's tumour [obs]
Burkitt Leukemia[accessedResource: MSH:D002051][accessDate: 04-11-2010]
GeneRIF:15520469
L3 Lymphocytic Leukemia
A form of undifferentiated malignant LYMPHOMA usually found in central Africa, but also reported in other parts of the world. It is commonly manifested as a large osteolytic lesion in the jaw or as an abdominal mass. B-cell antigens are expressed on the immature cells that make up the tumor in virtually all cases of Burkitt lymphoma. The Epstein-Barr virus (HERPESVIRUS 4, HUMAN) has been isolated from Burkitt lymphoma cases in Africa and it is implicated as the causative agent in these cases; however, most non-African cases are EBV-negative.[accessedResource: MSH:D002051][accessDate: 04-11-2010]
Tumor, Burkitt
Burkitt's Leukemia[accessedResource: MSH:D002051][accessDate: 04-11-2010]
GeneRIF:14697225
ICD9:200.2
L3 Lymphocytic Leukemia[accessedResource: MSH:D002051][accessDate: 04-11-2010]
Burkitt's tumor NOS (morphologic abnormality)
small Non-Cleaved cell Lymphoma, Burkitt's type
Lymphoma, African[accessedResource: MSH:D002051][accessDate: 04-11-2010]
Burkitt's tumour [obs][accessedResource: DOID:8584][accessDate: 04-11-2010]
GeneRIF:15728515
DOID:8584
GeneRIF:11443860
Burkitt's tumors (morphologic abnormality)
malignant lymphoma, Burkitt's type[accessedResource: DOID:8584][accessDate: 04-11-2010]
GeneRIF:12594826
Burkitt's tumor NOS (morphologic abnormality)[accessedResource: DOID:8584][accessDate: 04-11-2010]
GeneRIF:16169462
Burkitt's Leukemia
Lymphoma, African
GeneRIF:14707079
Burkitts Tumor
Burkitt Lymphoma[accessedResource: DOID:8584][accessDate: 04-11-2010]
GeneRIF:15498855
GeneRIF:11783945
Burkitt's tumors (morphologic abnormality)[accessedResource: DOID:8584][accessDate: 04-11-2010]
Burkitt lymphoma/leukaemia
GeneRIF:11869962
GeneRIF:12070030
Lymphoma, Burkitt's[accessedResource: MSH:D002051][accessDate: 04-11-2010]
James Malone
Burkitt's Tumor[accessedResource: MSH:D002051][accessDate: 04-11-2010]
MSH:D002051
GeneRIF:11964311
Burkitt's lymphoma - disorder
Tomasz Adamusiak
ligament cell
CL:0000384
InChIKey=WIIZWVCIJKGZOK-TUYINDPHDP
laevomycetinum
A dichloro-substituted acetamide containing a nitrobenzene ring, an amide bond and an alcohol function.
CHEBI:17698
cloramfenicol
A dichloro-substituted acetamide containing a nitrobenzene ring, an amide bond and two alcohol functions.
Fenicol
D-(-)-2,2-dichloro-N-(beta-hydroxy-alpha-(hydroxymethyl)-p-nitrophenylethyl)acetamide
C11H12Cl2N2O5
Sificetina
Chlorocol
OC[C@@H](NC(=O)C(Cl)Cl)[C@H](O)c1ccc(cc1)N(=O)=O
http://www.ebi.ac.uk/efo/EFO_0002403
D-(-)-threo-1-p-nitrophenyl-2-dichloroacetylamino-1,3-propanediol
Halomycetin
InChI=1/C11H12Cl2N2O5/c12-10(13)11(18)14-8(5-16)9(17)6-1-3-7(4-2-6)15(19)20/h1-4,8-10,16-17H,5H2,(H,14,18)/t8-,9-/m1/s1/f/h14H
levomicetina
Chloromycetin
Chloramex
chloramphenicol
Chlorocid
levomycetin
2,2-dichloro-N-[(1R,2R)-2-hydroxy-1-(hydroxymethyl)-2-(4-nitrophenyl)ethyl]acetamide
Globenicol
Ele Holloway
James Malone
Oleomycetin
chloramphenicolum
Ele Holloway
James Malone
MCCAR
http://www.ebi.ac.uk/efo/EFO_0001548
A hormone that specifically regulates growth.
growth hormone
Wachstumshormon
growth hormones
James Malone
http://www.ebi.ac.uk/efo/EFO_0001789
true
A day is a derived time unit which is equal to 24 hours.
A time unit which is equal to 24 hours.
day
UO:0000033
A body tissue consisting of long cells that contract when stimulated and produce motion.[accessedResource: BTO:0000887][accessDate: 04-11-2010]
James Malone
A body tissue consisting of long cells that contract when stimulated and produce motion.
muscle
BTO:0000887
Ele Holloway
James Malone
BCKN-1
James Malone
OntologyMappingImporter following MAT:0000165
hermaphrodite gonad
MAT:0000165
WBbt:0005178
James Malone
CBA/CaJ is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/000654.html
CBA/CaJ
JAX:000654
A poorly circumscribed neoplasm arising from the soft tissues. It is characterized by the presence of spindle-shaped fibroblasts and an infiltrative growth pattern.[accessedResource: C3042][accessDate: 04-11-2010]
James Malone
A poorly circumscribed neoplasm arising from the soft tissues. It is characterized by the presence of spindle-shaped fibroblasts and an infiltrative growth pattern.
fibromatosis
C3042
Tomasz Adamusiak
head mesoderm
FBbt:00000127
A LY2 is a cell line.
A LY2 is all of the following: something that is bearer of a breast carcinoma, something that derives from an
epithelial cell, and something that derives from a mammary gland.
Natural Language Generator 8th April 2010
James Malone
LY2
Jie Zheng
Tomasz Adamusiak
IR(lox/lox) transfection mouse strain maintained on a mixed (C57BL/6 x 129/Sv) genetic background.
IR (lox/lox)
PMID:9844629
true
An assay in which sequencing technology (e.g. Solexa/454) is used to generate RNA sequence, analyse the transcibed regions of the genome, and or to quantitate transcript abundance
obsolete_RNA-seq
ArrayExpress Production Team
RNA-sequencing
CHEBI:26536
retinoic acid
C20H28O2
InChIKey=SHGAZHPCJJPHSC-PKSOQXRJCZ
A retinoid that has formula C20H28O2.
3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraenoic acid
InChI=1/C20H28O2/c1-15(8-6-9-16(2)14-19(21)22)11-12-18-17(3)10-7-13-20(18,4)5/h6,8-9,11-12,14H,7,10,13H2,1-5H3,(H,21,22)/f/h21H
CC(C=CC1=C(C)CCCC1(C)C)=CC=CC(C)=CC(O)=O
http://www.ebi.ac.uk/efo/EFO_0001603
Tomasz Adamusiak
presumptive midbrain
ZFA:0000148
James Malone
true
Strain or line specific to virus
1.8
obsolete_virus strain
(NH4)2SO4; ammonium sulphate
Ele Holloway
DSSTox_Generic_SID:29704
DSSTox_CID:9704
Tomasz Adamusiak
James Malone
ammonium sulfate
CASRN:7783-20-2
James Malone
CS57619 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158643&type=germplasm
CS57619
http://www.arabidopsis.org/servlets/TairObject?id=1005158643&type=germplasm
James Malone
anal pad specific anlage
FBbt:00005482
obsolete_Daudi Burkitt's lymphoma cell line
James Malone
obsolete_Daudi Burkitt's lymphoma cell line
A Daudi Burkitt's lymphoma cell line is a cell line.
A Daudi Burkitt's lymphoma cell line is bearer of Daudi Burkitt's lymphoma.
2.6.1
duplicate of Daudi http://www.ebi.ac.uk/efo/EFO_0002169
true
Natural Language Generator 8th April 2010
James Malone
Natural Language Generator 8th April 2010
A 267b1 ki ras is a cell line.
A 267b1 ki ras derives from a prostate.
267B1
The part of an animal that connects the head with the body.[accessedResource: BTO:0000420][accessDate: 04-11-2010]
The membranous tube that attaches the thorax to the margins of the occipital foramen.
MAT:0000297
EV:0100476
Neck (volume)[accessedResource: FMAID:7155][accessDate: 04-11-2010]
Spine Neck[accessedResource: NIFSTD:sao1642908940][accessDate: 04-11-2010]
pedicle
Spine Neck
BTO:0000420
SAEL:70
pedicle[accessedResource: NIFSTD:sao1642908940][accessDate: 04-11-2010]
adult neck[accessedResource: TGMA:0000005][accessDate: 04-11-2010]
TGMA:0000005
NIFSTD:sao1642908940
James Malone
Subdivision of body proper, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with the cervical vertebral coumn, it is partially surrounded by skin of neck. Examples: There is only one neck.
The membranous tube that attaches the thorax to the margins of the occipital foramen.[accessedResource: TGMA:0000005][accessDate: 04-11-2010]
adult neck
The part of an animal that connects the head with the body.
Neck (volume)
FMAID:7155
Tomasz Adamusiak
neck
CORONARY HEART DIS[accessedResource: MSH:D003327][accessDate: 04-11-2010]
GeneRIF:16088850
Coronary Diseases[accessedResource: MSH:D003327][accessDate: 04-11-2010]
GeneRIF:12666851
GeneRIF:15193812
GeneRIF:14747236
GeneRIF:11859854
GeneRIF:11947914
DOID:3393
GeneRIF:15585218
An imbalance between myocardial functional requirements and the capacity of the CORONARY VESSELS to supply sufficient blood flow. It is a form of MYOCARDIAL ISCHEMIA (insufficient blood supply to the heart muscle) caused by a decreased capacity of the coronary vessels.
GeneRIF:15879687
CORONARY DIS
Coronary Artery Disease
Coronary Disease[accessedResource: NCIt:C26732][accessDate: 04-11-2010]
GeneRIF:12893022
GeneRIF:12801611
GeneRIF:12879153
GeneRIF:12151853
Coronary Disease
MSH:D003327
James Malone
GeneRIF:15653107
Coronary Heart Diseases
GeneRIF:15877284
GeneRIF:12362314
NCIt:C26732
GeneRIF:14576201
GeneRIF:15585206
CAD[accessedResource: NCIt:C26732][accessDate: 04-11-2010]
GeneRIF:15887860
GeneRIF:15598085
GeneRIF:12588754
GeneRIF:12151850
coronary heart disease
GeneRIF:11916624
GeneRIF:12676816
GeneRIF:15825968
CORONARY HEART DIS
Coronary Diseases
GeneRIF:12594357
GeneRIF:16159602
GeneRIF:12842840
GeneRIF:14967821
GeneRIF:15454272
GeneRIF:16113535
GeneRIF:12818402
GeneRIF:12030385
GeneRIF:12408999
GeneRIF:15379752
GeneRIF:15920035
Coronary heart disease is a cardiovascular disease in which there is a failure of coronary circulation to supply adequate circulation to cardiac muscle and surrounding tissue.
GeneRIF:11889198
GeneRIF:15607533
GeneRIF:14592833
GeneRIF:11919305
GeneRIF:15585208
GeneRIF:12207101
CAD
CORONARY DIS[accessedResource: MSH:D003327][accessDate: 04-11-2010]
CHD
GeneRIF:15920055
GeneRIF:11862316
Narrowing of the coronary arteries due to fatty deposits inside the arterial walls.
CHD - Coronary heart disease
GeneRIF:12588779
GeneRIF:14695459
Coronary Heart Diseases[accessedResource: MSH:D003327][accessDate: 04-11-2010]
GeneRIF:12104085
GeneRIF:12117730
CHD (coronary heart disease)[accessedResource: DOID:3393][accessDate: 04-11-2010]
GeneRIF:12074827
Coronary Artery Disease[accessedResource: NCIt:C26732][accessDate: 04-11-2010]
GeneRIF:15784171
Narrowing of the coronary arteries due to fatty deposits inside the arterial walls.[accessedResource: NCIt:C26732][accessDate: 04-11-2010]
GeneRIF:11972304
GeneRIF:15837082
An imbalance between myocardial functional requirements and the capacity of the CORONARY VESSELS to supply sufficient blood flow. It is a form of MYOCARDIAL ISCHEMIA (insufficient blood supply to the heart muscle) caused by a decreased capacity of the coronary vessels.[accessedResource: MSH:D003327][accessDate: 04-11-2010]
GeneRIF:15692099
GeneRIF:15199365
GeneRIF:12925562
Tomasz Adamusiak
cranial division of the internal carotid artery
ZFA:0001059
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#waterbath[accessedResource: MO_541][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0002089
A water bath is a temperature control bath in which a water acts as contact medium enabling temperature transfer from the heating element or cooling element to the sample. The temperature can be controlled in the 0 to 100 degree centigrade range (under normal pressure).
water bath
MO_541
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#waterbath
Duplicate with 'disease factor' EFO_0000408.
MO_787
James Malone
Jie Zheng
Acute Lymphocytic Leukemia
true
obsolete_disease state
Tomasz Adamusiak
The name of the pathology diagnosed in the organism from which the biomaterial was derived. The disease state is normal if no disease has been diagnosed. E.g Acute Lymphocytic Leukemia
1.6
phosgene
CCl2O
COCl2
ClC(Cl)=O
InChI=1/CCl2O/c2-1(3)4
InChIKey=YGYAWVDWMABLBF-UHFFFAOYAH
carbonyl dichloride
James Malone
CS57873 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158897&type=germplasm
CS57873
http://www.arabidopsis.org/servlets/TairObject?id=1005158897&type=germplasm
Quality? Is this intrinsic to the organism?
James Malone
Jie Zheng
Tomasz Adamusiak
The number of cell passages if the organism or organism part that is cultured is unicellular or a cell culture; otherwise the number of generations.
generation
MO_43
Ele Holloway
James Malone
SNU449
Jie Zheng
true
MO_740
uM
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#uM
James Malone
µM
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#uM[accessedResource: MO_740][accessDate: 04-11-2010]
A unit of molarity which is equal to one millionth of a molar or 10^[-6] M.
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001811
micromolar
Ele Holloway
James Malone
RD
Ele Holloway
James Malone
HEC1A
HEC-1A
2,4-dichlorophenol
120-83-2
2,4-dichlorophenol
20439
439
C6H4Cl2O
DCP
ovarian serous adenocarcinoma
U0126
CASRN:109511-58-2
DSSTox_CID:20470
STRUCTURE_ChemicalName_IUPAC:(2Z,3Z)-bis{amino[(2-aminophenyl)sulfanyl]methylidene}butanedinitrile
STRUCTURE_Formula:C18H16N6S2
Tomasz Adamusiak
DSSTox_Generic_SID:40470
Ele Holloway
James Malone
guard cell
One of a pair of cells flanking the stomatal pore and causing the opening and closing of the pore by changes in turgor.[accessedResource: CL:0000292][accessDate: 04-11-2010]
stomatal guard cell
One of a pair of cells flanking the stomatal pore and causing the opening and closing of the pore by changes in turgor.
stomatal guard cell[accessedResource: CL:0000292][accessDate: 04-11-2010]
Tomasz Adamusiak
CL:0000292
Tomasz Adamusiak
pharyngeal pouch 5
ZFA:0001133
InChI=1/C18H14F4N2O4S/c1-17(26,10-29(27,28)14-6-3-12(19)4-7-14)16(25)24-13-5-2-11(9-23)15(8-13)18(20,21)22/h2-8,26H,10H2,1H3,(H,24,25)/t17-/m0/s1/f/h24H
CHEBI:3090
bicalutamida
http://www.ebi.ac.uk/efo/EFO_0002006
James Malone
C[C@](O)(CS(=O)(=O)c1ccc(F)cc1)C(=O)Nc1ccc(C#N)c(c1)C(F)(F)F
InChIKey=LKJPYSCBVHEWIU-ARSKLOKFDL
C18H14F4N2O4S
C[C@](O)(CS(=O)(=O)c1ccc(F)cc1)C(=O)Nc2ccc(C#N)c(c2)C(F)(F)F
bicalutamidum
bicalutamide
An amide that has formula C18H14F4N2O4S.
Casodex
(2R)-N-[4-cyano-3-(trifluoromethyl)phenyl]-3-[(4-fluorophenyl)sulfonyl]-2-hydroxy-2-methylpropanamide
James Malone
beta cell islets
beta cell
Tomasz Adamusiak
insulin secreting cell[accessedResource: CL:0000168][accessDate: 04-11-2010]
CL:0000168
A cell that composes the bulk of the islets of Langerhans and secretes insulin.[accessedResource: NCIt:C32199][accessDate: 04-11-2010]
Insulin Cell
Insulin Secreting Cell
A cell that composes the bulk of the islets of Langerhans and secretes insulin.
NCIt:C32199
Insulin Cell[accessedResource: NCIt:C32199][accessDate: 04-11-2010]
PC3 cell[accessedResource: BTO:0001061][accessDate: 04-11-2010]
Ele Holloway
PC-3 cell[accessedResource: BTO:0001061][accessDate: 04-11-2010]
James Malone
PC3 cell
PC3
PC-3
PC-3 cell
Human prostate carcinoma cell line; established from the bone marrow metastasis isolated post-mortem from a 62-year-old Caucasian man with grade IV prostate cancer (poorly differentiated adenocarcinoma) after androgen suppression therapy; described to form tumors in nude mice, to grow in soft agar, and to be unresponsive to androgen treatment.[accessedResource: BTO:0001061][accessDate: 04-11-2010]
MCC:0000380
BTO:0001061
Human prostate carcinoma cell line; established from the bone marrow metastasis isolated post-mortem from a 62-year-old Caucasian man with grade IV prostate cancer (poorly differentiated adenocarcinoma) after androgen suppression therapy; described to form tumors in nude mice, to grow in soft agar, and to be unresponsive to androgen treatment.
CHEBI:35640
James Malone
http://www.ebi.ac.uk/efo/EFO_0001850
Adrenergic uptake inhibitors are drugs that block the transport of adrenergic transmitters into axon terminals or into storage vesicles within terminals. The tricyclic antidepressants and amphetamines are among the therapeutically important drugs that may act via inhibition of adrenergic transport. Many of these drugs also block transport of serotonin.
adrenergic uptake inhibitor
adrenergic uptake inhibitors
BTO:0001572
A thin layer of cartilage, usually hyaline, on the articular surface of bones in synovial joints.[accessedResource: BTO:0001572][accessDate: 04-11-2010]
James Malone
A thin layer of cartilage, usually hyaline, on the articular surface of bones in synovial joints.
articular cartilage
BTO:0001572
(all-E)-3,7-Dimethyl-9-(2,6,6-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid
Vesanoid
Stieva-A
CHEBI:15367
AGN 100335
3,7-Dimethyl-9-(2,6,6-trimethyl-1-cyclohexene-1-yl)-2,4,6,8-nonatetraenoic acid (ECL)
CC(\\C=C\\C1=C(C)CCCC1(C)C)=C/C=C/C(C)=C/C(O)=O
beta-Retinoic acid
Retin-A
Renova
Ro 1-5488
all-trans-Vitamin A acid
all-(E)-Retinoic acid
Vitamin A acid
all-trans-Vitamin A1 acid
tretinoin
Tretin M
C20H28O2
http://www.ebi.ac.uk/efo/EFO_0001481
InChIKey=SHGAZHPCJJPHSC-FWNNKZREDV
Retisol-A
all-trans-retinoic acid
InChI=1/C20H28O2/c1-15(8-6-9-16(2)14-19(21)22)11-12-18-17(3)10-7-13-20(18,4)5/h6,8-9,11-12,14H,7,10,13H2,1-5H3,(H,21,22)/b9-6+,12-11+,15-8+,16-14+/f/h21H
Acide retinoique (French) (DSL)
(2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraenoic acid
A retinoic acid that has formula C20H28O2.
all-trans-Tretinoin
Retinoic acid
Tretinoine (French) (EINECS)
all-trans-beta-Retinoic acid
trans-Retinoic acid
A resting stage of a plant (as the lily, onion, hyacinth, or tulip) that is usually formed underground and consists of a short stem base bearing one or more buds enclosed in overlapping membranous or fleshy leaves.[accessedResource: BTO:0000159][accessDate: 04-11-2010]
James Malone
A resting stage of a plant (as the lily, onion, hyacinth, or tulip) that is usually formed underground and consists of a short stem base bearing one or more buds enclosed in overlapping membranous or fleshy leaves.
bulb
BTO:0000159
MAT:0000367
An ampere is an electric current unit which is equal to the constant current which, if maintained in two straight parallel conductors of infinite length, of negligible circular cross-section, and placed 1 m apart in vacuum, would produce between these conductors a force equal to 2 x 10^[-7] newton per meter of length.
true
An electric current unit which is equal to the constant current which, if maintained in two straight parallel conductors of infinite length, of negligible circular cross-section, and placed 1 m apart in vacuum, would produce between these conductors a force equal to 2 x 10^[-7] newton per meter of length.
James Malone
http://www.ebi.ac.uk/efo/EFO_0001688
UO:0000011
A
ampere
agricultural chemicals
agrochemicals
agrichemicals
James Malone
agrochemical
http://www.ebi.ac.uk/efo/EFO_0001832
An agrochemical is a substance that is used in agriculture or horticulture.
agrichemical
CHEBI:33286
1: The part of the mammalian body between the neck and the abdomen; also: its cavity in which the heart and lungs lie.n2: The middle of the three chief divisions of the body of an insect; also: the corresponding part of a crustacean or an arachnid.[accessedResource: BTO:0001368][accessDate: 04-11-2010]
MAT:0000295
BTO:0001368
EV:0100010
The main middle section of the insect body comprising three thoracic rings: the pro-, the meso- and the metathoraces which are more or less well fused and cask-like sometimes having on the upper lateral part one of two pairs of wings, while on the ventrolateral part each thoracic ring bears a pair of legs.
The main middle section of the insect body comprising three thoracic rings: the pro-, the meso- and the metathoraces which are more or less well fused and cask-like sometimes having on the upper lateral part one of two pairs of wings, while on the ventrolateral part each thoracic ring bears a pair of legs.[accessedResource: FBbt:00000015][accessDate: 04-11-2010]
thorax
James Malone
FBbt:00000015
A small, slender, rigid, needle- or thornlike spicule.
1: The part of the mammalian body between the neck and the abdomen; also: its cavity in which the heart and lungs lie.n2: The middle of the three chief divisions of the body of an insect; also: the corresponding part of a crustacean or an arachnid.
acicula[accessedResource: TGMA:000136][accessDate: 04-11-2010]
Any blade with a few short branches arising apically or subapically.
Subdivision of trunk proper, which is demarcated from the neck by the plane of the superior thoracic aperture and from the abdomen internally by the inferior surface of the diaphragm and externally by the costal margin and associated with the thoracic vertebral column and ribcage and from the back of the thorax by the external surface of the posterolateral part of the rib cage, the anterior surface of the thoracic vertebral column and the posterior axillary lines; together with the abdomen and the perineum, it constitutes the trunk proper. Examples: There is only one thorax.
Chest
FMAID:9576
A small, slender, rigid, needle- or thornlike spicule.[accessedResource: TGMA:000136][accessDate: 04-11-2010]
TGMA:000136
Chest[accessedResource: FMAID:9576][accessDate: 04-11-2010]
acicula
SAEL:106
hydrochloric acid
20711
711
7647-01-0
HCl
hydrogen chloride
HCl
Tomasz Adamusiak
mesenchyme derived from head neural crest
ZFA:0000787
Tomasz Adamusiak
primordial vasculature
ZFA:0005076
Tomasz Adamusiak
neurocranial trabecula
ZFA:0001321
Ele Holloway
James Malone
A Giant Cell Tumor (GCT) cell line derived from a human fibrous histiocytoma lung metastasis
GCT
Jie Zheng
Tomasz Adamusiak
Athero-susceptible regions of aorta.
disturbed flow regions
https://www.cbil.upenn.edu/RADQuerier/php/displayStudy.php?study_id=449
James Malone
Lu130
James Malone
Dahl salt-sensitive
RGD:1582190
James Malone
MCF12A
diazepam
439-14-5
CHEBI:35481
James Malone
http://www.ebi.ac.uk/efo/EFO_0001841
A drug that has principally analgesic, antipyretic and anti-inflammatory actions. Non-narcotic analgesics do not bind to opioid receptors.
non-narcotic analgesic
James Malone
inferior parietal lobule
FMA:77536
esophageal carcinoma
true
NIFSTD:birnlex_203
2.0.1
obsolete_rat strain
Tomasz Adamusiak
Strain or line specific to rat.
James Malone
consolodation of strain with taxon. rat strain subclasses moved to subclasses of rattus
James Malone
An organization role is a role which is borne by an organization.
organization role
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#investigator[accessedResource: MO_769][accessDate: 04-11-2010]
Tomasz Adamusiak
investigator
MO_769
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#investigator
polyethylene glycol
25322-68-3
27862
C2H6O2
ethylene glycol
PEG
BTO:0000784
MAT:0000442
Any of the rounded masses of lymphoid tissue that are surrounded by a capsule of connective tissue, are distributed along the lymphatic vessels, and contain numerous lymphocytes which filter the flow of lymph.[accessedResource: BTO:0000784][accessDate: 04-11-2010]
FMAID:5034
MA:00000139
lymph gland[accessedResource: BTO:0000784][accessDate: 04-11-2010]
EV:0100050
James Malone
lymph node
Any of the rounded masses of lymphoid tissue that are surrounded by a capsule of connective tissue, are distributed along the lymphatic vessels, and contain numerous lymphocytes which filter the flow of lymph.
lymph gland
Tomasz Adamusiak
neuromast
ZFA:0000243
alanine
302-72-7
female accessory gland
Small, bilaterally paired gland that lies behind the spermathecae and is connected to the uterus by a duct. The gland wall consists of a single layer of polygonal cells, each with a large vacuole and a minute acidophillic granule towards the gland lumen.
ACgl
ACgl[accessedResource: FBbt:00004914][accessDate: 04-11-2010]
colleterial gland[accessedResource: FBbt:00004914][accessDate: 04-11-2010]
Small, bilaterally paired gland that lies behind the spermathecae and is connected to the uterus by a duct. The gland wall consists of a single layer of polygonal cells, each with a large vacuole and a minute acidophillic granule towards the gland lumen.[accessedResource: FBbt:00004914][accessDate: 04-11-2010]
parovarium
parovarium[accessedResource: FBbt:00004914][accessDate: 04-11-2010]
Develops from male repressed primordium.
FBbt:00004914
colleterial gland
A steroid hormone that stimulates or controls the development and maintenance of masculine characteristics in vertebrates by binding to androgen receptors.
Androgene
androgen
http://www.ebi.ac.uk/efo/EFO_0001484
androgenes
androgeno
CHEBI:50113
androgenos
androgens
James Malone
Tomasz Adamusiak
ethmoid cartilage
ZFA:0001405
Tomasz Adamusiak
interferon gamma
A phenothiazine derivative having a trifluoromethyl subsitituent at the 2-position and a 3-(4-methylpiperazin-1-yl)propyl group at the N-10 position.
trifluoperazinum
trifluoperazina
InChI=1/C21H24F3N3S/c1-25-11-13-26(14-12-25)9-4-10-27-17-5-2-3-6-19(17)28-20-8-7-16(15-18(20)27)21(22,23)24/h2-3,5-8,15H,4,9-14H2,1H3
10-[3-(4-methylpiperazin-1-yl)propyl]-2-(trifluoromethyl)-10H-phenothiazine
trifluperazine
CN1CCN(CCCN2c3ccccc3Sc3ccc(cc23)C(F)(F)F)CC1
A phenothiazine that has formula C21H24F3N3S.
http://www.ebi.ac.uk/efo/EFO_0001631
C21H24F3N3S
10-[3-(4-METHYL-PIPERAZIN-1-YL)-PROPYL]-2-TRIFLUOROMETHYL-10H-PHENOTHIAZINE
10-[3-(4-methyl-1-piperazinyl)propyl]-2-(trifluoromethyl)-10H-phenothiazine
trifluoromethyl-10-(3'-(1-methyl-4-piperazinyl)propyl)phenothiazine
James Malone
InChIKey=ZEWQUBUPAILYHI-UHFFFAOYAS
trifluoperazine
CHEBI:45951
trifluoroperazine
http://www.ebi.ac.uk/efo/EFO_0001884
CHEBI:50177
dermatological agent
dermatologic agent
dermatologic drug
James Malone
dermatologic drugs
A drug used to treat or prevent skin disorders or for the routine care of skin.
James Malone
Dahl salt-resistant
RGD:1582184
acute megakaryoblastic leukaemia
Tropical pyomyositis [dup] (disorder)[accessedResource: DOID:876][accessDate: 04-11-2010]
Tropical pyomyositis (disorder)
Tomasz Adamusiak
DOID:876
pyomyositis
Tropical pyomyositis[accessedResource: DOID:876][accessDate: 04-11-2010]
Tropical pyomyositis [dup] (disorder)
pyomyositis[accessedResource: DOID:876][accessDate: 04-11-2010]
Tropical pyomyositis (disorder)[accessedResource: DOID:876][accessDate: 04-11-2010]
Tropical pyomyositis
Tomasz Adamusiak
corpuscles of Stannius
ZFA:0001200
James Malone
segmentation 1-4 somites
ZFS:0000023
http://www.ebi.ac.uk/efo/EFO_0002398
A role played by a chemical compound in the onset of allergic reaction and interacting with molecular pathways involved in allergy.
alergeno
Ele Holloway
allergen
allergenic agent
allergene
James Malone
CHEBI:50904
pseudohypertrophic progressive duchenne and becker types muscular dystrophy[accessedResource: DOID:14691][accessDate: 04-11-2010]
James Malone
Tomasz Adamusiak
Becker's muscular dystrophy
DOID:14691
Benign pseudohypertrophic muscular dystrophy
pseudohypertrophic progressive duchenne and becker types muscular dystrophy
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms.[accessedResource: NCIt:C27291][accessDate: 04-11-2010]
GeneRIF:12054564
GeneRIF:15310753
A small round cell tumor that lacks morphologic, immunohistochemical, and electron microscopic evidence of neuroectodermal differentiation. It represents one of the two ends of the spectrum called Ewing's sarcoma/peripheral neuroectodermal tumor. It affects mostly males under age 20, and it can occur in soft tissue or bone. Pain and the presence of a mass are the most common clinical symptoms.[accessedResource: NCIt:C4817][accessDate: 04-11-2010]
GeneRIF:12172985
Ewing's sarcoma[accessedResource: SNOMEDCT:76909002][accessDate: 04-11-2010]
GeneRIF:15077162
GeneRIF:11992404
Ewing's sarcoma (morphologic abnormality)[accessedResource: DOID:3369][accessDate: 04-11-2010]
SNOMEDCT:76909002
Ewing's Family of Tumours
Ewing Tumor
GeneRIF:11956622
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms. -- 2004
GeneRIF:12527902
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms.
GeneRIF:15273724
Ewing sarcoma
Ewing Family of Tumors[accessedResource: NCIt:C27291][accessDate: 04-11-2010]
GeneRIF:15044653
GeneRIF:15919668
Ewing's tumour
GeneRIF:12447693
GeneRIF:12700668
GeneRIF:15282325
A malignant tumor of the bone which always arises in the medullary tissue, occurring more often in cylindrical bones. There are conspicuous foci of necrosis in association with irregular masses of small, regular, rounded or ovoid cells with very scanty cytoplasm. The tumor occurs usually before the age of 20, about twice as frequently in males as in females. (From Dorland, 27th ed; Stedman, 25th ed)
Ewing's tumor
MSH:D012512
NCIt:C27291
GeneRIF:14528100
Ewing's sarcoma (morphologic abnormality)
GeneRIF:15748890
GeneRIF:15328192
Ewing Sarcoma/Peripheral Primitive Neuroectodermal Tumor[accessedResource: NCIt:C27291][accessDate: 04-11-2010]
GeneRIF:12557222
Ewing's Family of Tumors
Ewing's Family of Tumours[accessedResource: NCIt:C27291][accessDate: 04-11-2010]
Ewing Sarcoma/Peripheral Primitive Neuroectodermal Tumor
NCIt:C4817
Ewing Family of Tumors
Tumors of Ewing's Family[accessedResource: NCIt:C27291][accessDate: 04-11-2010]
Tomasz Adamusiak
A small round cell tumor that lacks morphologic, immunohistochemical, and electron microscopic evidence of neuroectodermal differentiation. It represents one of the two ends of the spectrum called Ewing's sarcoma/peripheral neuroectodermal tumor. It affects mostly males under age 20, and it can occur in soft tissue or bone. Pain and the presence of a mass are the most common clinical symptoms.
Ewing's Tumor[accessedResource: NCIt:C4817][accessDate: 04-11-2010]
Ewing Tumor[accessedResource: MSH:D012512][accessDate: 04-11-2010]
GeneRIF:11313995
Ewing's tumour[accessedResource: SNOMEDCT:76909002][accessDate: 04-11-2010]
Ewing's Sarcoma/Peripheral Primitive Neuroectodermal Tumor[accessedResource: NCIt:C27291][accessDate: 04-11-2010]
GeneRIF:14977835
ES
DOID:3369
A malignant tumor of the bone which always arises in the medullary tissue, occurring more often in cylindrical bones. There are conspicuous foci of necrosis in association with irregular masses of small, regular, rounded or ovoid cells with very scanty cytoplasm. The tumor occurs usually before the age of 20, about twice as frequently in males as in females. (From Dorland, 27th ed; Stedman, 25th ed)[accessedResource: MSH:D012512][accessDate: 04-11-2010]
Tumors of the Ewing's Family[accessedResource: NCIt:C27291][accessDate: 04-11-2010]
Sarcoma, Ewing's
James Malone
GeneRIF:15581626
ES[accessedResource: NCIt:C4817][accessDate: 04-11-2010]
Ewing's sarcoma/peripheral primitive neuroectodermal tumor
Tumors of the Ewing's Family
James Malone
ZR7530
The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates.[accessedResource: ZFA:0000706][accessDate: 04-11-2010]
BTO:0000269
colon
MAP:0000001
The part of the large intestine that extends from the cecum to the rectum.[accessedResource: BTO:0000269][accessDate: 04-11-2010]
The part of the large intestine measured from the cecum to the rectum consisting of ascending, transverse, descending and sigmoid portions. The purpose of the colon is to remove water from digested food prior to excretion.
SAEL:22
XAO:0000243
ZFA:0000706
MA:0000335
FMAID:14543
posterior intestine[accessedResource: ZFA:0000706][accessDate: 04-11-2010]
James Malone
The part of the large intestine that extends from the cecum to the rectum.
The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates.
EV:0100079
EMAPA:18939
posterior intestine
James Malone
CS57783 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158807&type=germplasm
CS57783
http://www.arabidopsis.org/servlets/TairObject?id=1005158807&type=germplasm
atrazine
1912-24-9
20112
6-chloro-N-ethyl-N'-isopropyl-1,3,5-triazine-2,4-diamine
C8H14ClN5
Ele Holloway
James Malone
CROAP2
CROAP-2
caffeine
58-08-2
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#dose_response_design[accessedResource: MO_485][accessDate: 04-11-2010]
Tomasz Adamusiak
dose response design
MO_485
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#dose_response_design
FMAID:14545
The portion of the colon between the cecum and the right colic flexure.[accessedResource: BTO:0000270][accessDate: 04-11-2010]
MAT:0000311
The portion of the colon between the cecum and the right colic flexure.
ascending colon
colon ascendens
colon ascendens[accessedResource: BTO:0000270][accessDate: 04-11-2010]
James Malone
Organ part which is continuous with the cecum proximally and the transverse colon distally.
EV:0100450
BTO:0000270
(Z)-1-[N-(2-aminoethyl)-N-(2-ammonioethyl)amino]diazen-1-ium-1,2-diolate
DSSTox_Generic_SID:36795
CASRN:146724-94-9
STRUCTURE_ChemicalName_IUPAC:1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane
James Malone
DSSTox_CID:16795
Ele Holloway
Tomasz Adamusiak
STRUCTURE_Formula:C4H13N5O2
DETA-NONOate
C21H31F3O
InChI=1/C21H31F3O/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20(25)21(22,23)24/h6-7,9-10,12-13,15-16H,2-5,8,11,14,17-19H2,1H3/b7-6-,10-9-,13-12-,16-15-
CCCCC\\C=C/C\\C=C/C\\C=C/C\\C=C/CCCC(=O)C(F)(F)F
http://www.ebi.ac.uk/efo/EFO_0001476
(6Z,9Z,12Z,15Z)-1,1,1-trifluorohenicosa-6,9,12,15-tetraen-2-one
Arachidonyltrifluoromethane
James Malone
Arachidonyl trifluoromethyl ketone
InChIKey=PLWROONZUDKYKG-DOFZRALJBM
AACOCF3
CHEBI:2341
An organofluorine compound that has formula C21H31F3O.
Arachidonic acid trifluoromethyl ketone
Tomasz Adamusiak
prothoracic gland
FBbt:00001724
Jie Zheng
Tomasz Adamusiak
lung endoderm
A moderately malignant neoplasm composed of primitive neuroectodermal cells dispersed in myxomatous or fibrous stroma intermixed with mature ganglion cells. It may undergo transformation into a neuroblastoma. It arises from the sympathetic trunk or less frequently from the adrenal medulla, cerebral cortex, and other locations. Cervical ganglioneuroblastomas may be associated with HORNER SYNDROME and the tumor may occasionally secrete vasoactive intestinal peptide, resulting in chronic diarrhea.
A neuroblastic tumor characterized by the presence of neuroblastic cells, ganglion cells, and a stroma with Schwannian differentiation constituting more than fifty-percent of the tumor volume. There are two histologic subtypes identified: ganglioneuroblastoma, intermixed and ganglioneuroblastoma, and nodular.
Ganglioneuroblastoma (morphologic abnormality)
NCIt:C3790
A moderately malignant neoplasm composed of primitive neuroectodermal cells dispersed in myxomatous or fibrous stroma intermixed with mature ganglion cells. It may undergo transformation into a neuroblastoma. It arises from the sympathetic trunk or less frequently from the adrenal medulla, cerebral cortex, and other locations. Cervical ganglioneuroblastomas may be associated with HORNER SYNDROME and the tumor may occasionally secrete vasoactive intestinal peptide, resulting in chronic diarrhea (MeSH).
Ganglioneuroblastomas
A neuroblastic tumor characterized by the presence of neuroblastic cells, ganglion cells, and a stroma with Schwannian differentiation constituting more than fifty-percent of the tumor volume. There are two histologic subtypes identified: ganglioneuroblastoma, intermixed and ganglioneuroblastoma, nodular.
James Malone
DOID:4163
MSH:D018305
SNOMEDCT:69515008
Ganglioneuroblastoma (morphologic abnormality)[accessedResource: SNOMEDCT:69515008][accessDate: 04-11-2010]
ganglioneuroblastoma
GeneRIF:12185600
Tomasz Adamusiak
A moderately malignant neoplasm composed of primitive neuroectodermal cells dispersed in myxomatous or fibrous stroma intermixed with mature ganglion cells. It may undergo transformation into a neuroblastoma. It arises from the sympathetic trunk or less frequently from the adrenal medulla, cerebral cortex, and other locations. Cervical ganglioneuroblastomas may be associated with HORNER SYNDROME and the tumor may occasionally secrete vasoactive intestinal peptide, resulting in chronic diarrhea (MeSH).[accessedResource: NIFSTD:birnlex_12633][accessDate: 04-11-2010]
NIFSTD:birnlex_12633
A neuroblastic tumor characterized by the presence of neuroblastic cells, ganglion cells, and a stroma with Schwannian differentiation constituting more than fifty-percent of the tumor volume. There are two histologic subtypes identified: ganglioneuroblastoma, intermixed and ganglioneuroblastoma, nodular.[accessedResource: NCIt:C3790][accessDate: 04-11-2010]
A moderately malignant neoplasm composed of primitive neuroectodermal cells dispersed in myxomatous or fibrous stroma intermixed with mature ganglion cells. It may undergo transformation into a neuroblastoma. It arises from the sympathetic trunk or less frequently from the adrenal medulla, cerebral cortex, and other locations. Cervical ganglioneuroblastomas may be associated with HORNER SYNDROME and the tumor may occasionally secrete vasoactive intestinal peptide, resulting in chronic diarrhea.[accessedResource: MSH:D018305][accessDate: 04-11-2010]
Ganglioneuroblastomas[accessedResource: MSH:D018305][accessDate: 04-11-2010]
true
A dimensionless concentration notation which denotes the amount of a given substance in a total amount of 1,000,000 regardless of the units of measure used as long as they are the same or 1 part in 10^[6].
parts per million
10^[-6]
ppm
whole organism
Ele Holloway
James Malone
NCI-N87
calcitriol
(1S,3R,5Z,7E)-9,10-secocholesta-5,7,10-triene-1,3,25-triol
22722
32222-06-3
C27H44O3
1alpha,25-dihydroxyvitamin D3; 1,25-dihydroxyvitamin D3; 1,25(OH)2D3
Tomasz Adamusiak
hypopharynx anlage
FBbt:00005442
James Malone
A Pseudomonas aeruginosa PA14 infection is a Pseudomonas infection of strain PA14.
Pseudomonas aeruginosa PA14 infection
Plotnikova, J. M., Rahme, L. G., Ausubel, F. M. (2000). Pathogenesis of the Human Opportunistic Pathogen Pseudomonas aeruginosa PA14 in Arabidopsis. Plant Physiol. 124: 1766-1774
fluroanthene
206-44-0
24104
C16H10
fluoranthene
Denotes a person having origins in any of the original peoples of the Far East, Southeast Asia, or the Indian subcontinent, including Cambodia, China, India, Japan, Korea, Malaysia, Mongolia, Pakistan, the Philippine Islands, Thailand, and Vietnam.
Jie Zheng
Asians
Asians[accessedResource: NCIt:C41260][accessDate: 04-11-2010]
Asian
NCIt:C41260
Tomasz Adamusiak
Denotes a person having origins in any of the original peoples of the Far East, Southeast Asia, or the Indian subcontinent, including Cambodia, China, India, Japan, Korea, Malaysia, Mongolia, Pakistan, the Philippine Islands, Thailand, and Vietnam.[accessedResource: NCIt:C41260][accessDate: 04-11-2010]
James Malone
nongranular leukocyte[accessedResource: BTO:0000876][accessDate: 04-11-2010]
BTO:0000876
A mononuclear phagocytic leukocyte, 13 to 25 mm in diameter, with an ovoid or kidney-shaped nucleus, containing lacy, linear chromatin and abundant gray-blue cytoplasm filled with fine reddish and azurophilic granules. Formed in the bone marrow from promonocytes, monocytes are transported to tissues such as the lung and liver, where they develop into macrophages.
Myeloid mononuclear recirculating leukocyte that can act as a precursor of tissue macrophages, osteoclasts and some populations of tissue dendritic cells.[accessedResource: CL:0000576][accessDate: 04-11-2010]
monocyte
A mononuclear phagocytic leukocyte, 13 to 25 mm in diameter, with an ovoid or kidney-shaped nucleus, containing lacy, linear chromatin and abundant gray-blue cytoplasm filled with fine reddish and azurophilic granules. Formed in the bone marrow from promonocytes, monocytes are transported to tissues such as the lung and liver, where they develop into macrophages.[accessedResource: BTO:0000876][accessDate: 04-11-2010]
nongranular leukocyte
CL:0000576
Myeloid mononuclear recirculating leukocyte that can act as a precursor of tissue macrophages, osteoclasts and some populations of tissue dendritic cells.
mononuclear leukocyte[accessedResource: BTO:0000876][accessDate: 04-11-2010]
mononuclear leukocyte
Celiac rickets
CELIAC DIS[accessedResource: MSH:D002446][accessDate: 04-11-2010]
GeneRIF:15120190
GeneRIF:15657618
Idiopathic steatorrhea
ICD9:579.0
Gluten-sensitive enteropathy[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
Celiac disease (disorder)
Celiac disease NOS (disorder)[accessedResource: DOID:10608][accessDate: 04-11-2010]
Idiopathic steatorrhea[accessedResource: DOID:10608][accessDate: 04-11-2010]
Gluten-induced enteropathy syndrome[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
GeneRIF:12421937
Gluten enteropathy
GeneRIF:12093810
A malabsorption syndrome that is precipitated by the ingestion of GLUTEN-containing foods, such as wheat, rye, and barley. It is characterized by INFLAMMATION of the SMALL INTESTINE, loss of MICROVILLI structure, failed INTESTINAL ABSORPTION, and MALNUTRITION.
GeneRIF:12755416
Coeliac syndrome
GeneRIF:12439623
CS - Celiac sprue[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
SNOMEDCT:275404008
Non Tropical Sprue[accessedResource: NCIt:C26714][accessDate: 04-11-2010]
Non-tropical sprue
GeneRIF:15174785
NCIt:C26714
Coeliac disease
Sprue
Celiac Sprue
CD - Celiac disease
Coeliac rickets
SNOMEDCT:396331005
GeneRIF:16285941
Celiac disease NOS
Coeliac disease [Ambiguous]
GeneRIF:12743709
Wheat-sensitive enteropathy
MSH:D002446
Coeliac disease [Ambiguous][accessedResource: DOID:10608][accessDate: 04-11-2010]
GeneRIF:11908704
Celiac syndrome[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
CD - Celiac disease[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
Gluten-Sensitive Enteropathy
Coeliac sprue
Gluten Enteropathies
CD - Coeliac disease[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
Coeliac disease[accessedResource: DOID:10608][accessDate: 04-11-2010]
GeneRIF:12039527
GeneRIF:15746535
GeneRIF:15826953
A malabsorption syndrome that is precipitated by the ingestion of GLUTEN-containing foods, such as wheat, rye, and barley. It is characterized by INFLAMMATION of the SMALL INTESTINE, loss of MICROVILLI structure, failed INTESTINAL ABSORPTION, and MALNUTRITION.[accessedResource: MSH:D002446][accessDate: 04-11-2010]
GeneRIF:12759242
GeneRIF:12698366
Celiac syndrome
GeneRIF:15617864
GSE - Gluten-sensitive enteropathy
celiac disease
Enteropathy, Gluten[accessedResource: MSH:D002446][accessDate: 04-11-2010]
Coeliac disease NOS[accessedResource: SNOMEDCT:197481005][accessDate: 04-11-2010]
Nontropical sprue[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
GeneRIF:12788988
GeneRIF:12074713
GeneRIF:16112033
Coeliac sprue[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
GeneRIF:11972887
CD - Coeliac disease
SNOMEDCT:197481005
Coeliac rickets[accessedResource: SNOMEDCT:275404008][accessDate: 04-11-2010]
Gluten-responsive sprue
Enteropathies, Gluten[accessedResource: MSH:D002446][accessDate: 04-11-2010]
Celiac disease NOS[accessedResource: SNOMEDCT:197481005][accessDate: 04-11-2010]
GeneRIF:14991945
celiac sprue[accessedResource: DOID:10608][accessDate: 04-11-2010]
DOID:10608
Wheat-sensitive enteropathy[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
GeneRIF:12542746
GeneRIF:14675396
Gluten-Induced Enteropathy
Celiac rickets (disorder)[accessedResource: SNOMEDCT:275404008][accessDate: 04-11-2010]
GeneRIF:11826026
Nontropical Sprue
Coeliac syndrome[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
Sprue[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
Celiac rickets (disorder)
Idiopathic steatorrhoea[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
Coeliac disease NOS
GeneRIF:12732349
Celiac rickets[accessedResource: SNOMEDCT:275404008][accessDate: 04-11-2010]
GeneRIF:12959221
Gluten-responsive sprue[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
CS - Coeliac sprue[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
Steatorrhoea - idiopathic
CS - Celiac sprue
GeneRIF:15215891
GeneRIF:11869041
Gluten-Induced Enteropathy[accessedResource: NCIt:C26714][accessDate: 04-11-2010]
GeneRIF:15645196
GeneRIF:12675238
GeneRIF:16026592
CELIAC DIS
Gluten-Sensitive Enteropathies[accessedResource: MSH:D002446][accessDate: 04-11-2010]
GeneRIF:15324937
Celiac disease NOS (disorder)
CS - Coeliac sprue
James Malone
GeneRIF:12559633
Celiac disease (disorder)[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
GSE - Gluten-sensitive enteropathy[accessedResource: SNOMEDCT:396331005][accessDate: 04-11-2010]
Enteropathies, Gluten-Sensitive
Gluten-induced enteropathy syndrome
GeneRIF:12410804
Ele Holloway
James Malone
SW1573
sarcomatoid transitional cell carcinoma of the kidney pelvis[accessedResource: DOID:6844][accessDate: 04-11-2010]
Transitional cell carcinoma of kidney (disorder)[accessedResource: SNOMEDCT:408642003][accessDate: 04-11-2010]
sarcomatoid transitional cell carcinoma of renal Pelvis[accessedResource: DOID:6844][accessDate: 04-11-2010]
NCIt:C7355
Renal Pelvis Urothelial Carcinoma
sarcomatoid transitional cell carcinoma of renal Pelvis
Renal Pelvis Transitional Cell Carcinoma[accessedResource: NCIt:C7355][accessDate: 04-11-2010]
SNOMEDCT:408642003
Urothelial Cell Carcinoma of Renal Pelvis
Transitional Cell Carcinoma of Renal Pelvis[accessedResource: NCIt:C7355][accessDate: 04-11-2010]
Transitional Cell Carcinoma of the Renal Pelvis[accessedResource: NCIt:C7355][accessDate: 04-11-2010]
Urothelial Cell Carcinoma of Renal Pelvis[accessedResource: NCIt:C7355][accessDate: 04-11-2010]
Renal Pelvis Urothelial Carcinoma[accessedResource: NCIt:C7355][accessDate: 04-11-2010]
Transitional cell carcinoma of kidney (disorder)
Renal Pelvis Transitional Cell Carcinoma
sarcomatoid transitional cell carcinoma of the kidney pelvis
DOID:6844
Urothelial Cell Carcinoma of the Renal Pelvis[accessedResource: NCIt:C7355][accessDate: 04-11-2010]
Transitional Cell Carcinoma of the Renal Pelvis
Tomasz Adamusiak
Urothelial Cell Carcinoma of the Renal Pelvis
transitional cell carcinoma of kidney
Transitional Cell Carcinoma of Renal Pelvis
Tomasz Adamusiak
ILSXISS112/TejJ
http://jaxmice.jax.org/strain/009323.html
FBbt:00005508
embryonic central brain mushroom body
mushroom body primordium
Embryonic structure from which the mushroom body is derived. The development of the mushroom body proceeds as follows: Axonogenesis of embryonic Kenyon cells starts late in embryonic stage 14. The axons from these cells extend towards the lateral protocerebral tract (LTP). During stage 16, a second set of Kenyon cell fibers form a second tract, closely apposed to the first. By late stage 16, both tracts extend anteriorly beyond the LTP to form the distal part of the peduncle. These tracts make a sharp medial turn close to the boundary with the deutocerebrum to form the medial lobe. By late stage 17 the dorsal lobe has emerged as a collateral outgrowth from the point where these tracts bend. Finally, the calyx forms near to the end of embryogenesis.
The development of the mushroom body proceeds as follows: Axonogenesis of embryonic Kenyon cells starts late in embryonic stage 14. The axons from these cells extend towards the lateral proto-cerebral tract (LTP). During stage 16, a second set of kenyon cell fibres form a second tract, closely apposed to the first. By late stage 16, both tracts extend anteriorly beyond the LTP to form the distal part of the peduncle. These tracts make a sharp medial turn close to the boundary with the deutocerebrum to form the medial lobe. By late stage 17 the dorsal lobe has emerged as a collateral outgrowth from the point where these tracts bend. Finally, the calyx forms near to the end of embryogenesis.
Embryonic structure from which the mushroom body is derived. The development of the mushroom body proceeds as follows: Axonogenesis of embryonic Kenyon cells starts late in embryonic stage 14. The axons from these cells extend towards the lateral protocerebral tract (LTP). During stage 16, a second set of Kenyon cell fibers form a second tract, closely apposed to the first. By late stage 16, both tracts extend anteriorly beyond the LTP to form the distal part of the peduncle. These tracts make a sharp medial turn close to the boundary with the deutocerebrum to form the medial lobe. By late stage 17 the dorsal lobe has emerged as a collateral outgrowth from the point where these tracts bend. Finally, the calyx forms near to the end of embryogenesis.[accessedResource: FBbt:00005508][accessDate: 04-11-2010]
James Malone
mushroom body primordium[accessedResource: FBbt:00005508][accessDate: 04-11-2010]
CHEBI:46195
paracetamol
An acetamide that has formula C8H9NO2.
p-acetaminophenol
http://www.ebi.ac.uk/efo/EFO_0001589
p-hydroxyphenolacetamide
4'-hydroxyacetanilide
APAP
Acenol
Acetaminophen
James Malone
A derivative of phenol which has an acetamido substituent located para to the phenolic -OH group.
CC(=O)Nc1ccc(O)cc1
N-acetyl-p-aminophenol
InChI=1/C8H9NO2/c1-6(10)9-7-2-4-8(11)5-3-7/h2-5,11H,1H3,(H,9,10)/f/h9H
p-Acetylaminophenol
paracetamolum
p-acetamidophenol
p-hydroxyacetanilide
4-(Acetylamino)phenol
InChIKey=RZVAJINKPMORJF-BGGKNDAXCW
N-(4-hydroxyphenyl)acetamide
Tylenol
4-acetamidophenol
acetaminofen
C8H9NO2
acetaminophene
Ele Holloway
James Malone
A204
Polymyositis (disorder)[accessedResource: DOID:10222][accessDate: 04-11-2010]
Tomasz Adamusiak
polymyositis
DOID:10222
Polymyositis (disorder)
James Malone
true
1.5
Duplicate with B-cell acute lymphoblastic leukemia (EFO_0000094) use this instead
obsolete_B-precursor acute lymphoblastic leukemia
taste system
MAT:0000275
gustatory system[accessedResource: TAO:0001101][accessDate: 04-11-2010]
FBbt:00005159
gustatory sensory organ[accessedResource: MAT:0000275][accessDate: 04-11-2010]
Gustatory organ system
gustatory system
Any sense organ (FBbt:00005155) that functions in (some) detection of chemical stimulus involved in sensory perception of taste (GO:0050912).
Gustatory organ system[accessedResource: FMAID:7194][accessDate: 04-11-2010]
ZFA:0001101
gustatory sensory organ
Any sense organ (FBbt:00005155) that functions in (some) detection of chemical stimulus involved in sensory perception of taste (GO:0050912).[accessedResource: FBbt:00005159][accessDate: 04-11-2010]
TAO:0001101
James Malone
Any sense organ (FBbt:00005155) that has function 'detection of chemical stimulus involved in sensory perception of taste (GO:0050912)'.
FMAID:7194
James Malone
embryonic antennal sense organ
FBbt:00005568
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#development_or_differentiation_design[accessedResource: MO_892][accessDate: 04-11-2010]
Tomasz Adamusiak
development or differentiation design
MO_892
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#development_or_differentiation_design
James Malone
leaf vascular tissue
Ele Holloway
James Malone
WM793
James Malone
CS57717 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158741&type=germplasm
CS57717
http://www.arabidopsis.org/servlets/TairObject?id=1005158741&type=germplasm
GeneRIF:16098034
GeneRIF:12913118
GeneRIF:15345711
GeneRIF:15471851
GeneRIF:16025105
GeneRIF:15593213
GeneRIF:15068249
GeneRIF:16081426
GeneRIF:16081813
GeneRIF:15818662
GeneRIF:12609057
progressive systemic sclerosis[accessedResource: DOID:418][accessDate: 04-11-2010]
GeneRIF:12015245
systemic scleroderma
GeneRIF:12629514
GeneRIF:14730619
GeneRIF:12508774
GeneRIF:12233882
PSS (progressive systemic sclerosis)
Systemic sclerosis (disorder)[accessedResource: SNOMEDCT:89155008][accessDate: 04-11-2010]
Thibierge-Weissenbach syndrome
GeneRIF:14705224
GeneRIF:15149850
GeneRIF:16109415
ICD9:710.1
GeneRIF:15654958
GeneRIF:12925209
GeneRIF:12528119
Thibierge-Weissenbach syndrome[accessedResource: SNOMEDCT:89155008][accessDate: 04-11-2010]
GeneRIF:15833746
A chronic multi-system disorder of CONNECTIVE TISSUE. It is characterized by SCLEROSIS in the SKIN, the LUNGS, the HEART, the GASTROINTESTINAL TRACT, the KIDNEYS, and the MUSCULOSKELETAL SYSTEM. Other important features include diseased small BLOOD VESSELS and AUTOANTIBODIES. The disorder is named for its most prominent feature (hard skin), and classified into subsets by the extent of skin thickening: LIMITED SCLERODERMA and DIFFUSE SCLERODERMA.
Progressive systemic sclerosis
Systemic sclerosis (disorder)
GeneRIF:16049784
Scleroderma syndrome
GeneRIF:14613297
GeneRIF:14764526
GeneRIF:14730633
GeneRIF:11796184
systemic sclerosis[accessedResource: DOID:418][accessDate: 04-11-2010]
SS - Systemic sclerosis
GeneRIF:12847691
GeneRIF:12858451
GeneRIF:12388554
Scleroderma (& [systemic sclerosis])[accessedResource: DOID:418][accessDate: 04-11-2010]
GeneRIF:15110723
GeneRIF:15896720
GeneRIF:15146427
GeneRIF:14722617
GeneRIF:12493731
James Malone
GeneRIF:15247510
Scleroderma[accessedResource: SNOMEDCT:89155008][accessDate: 04-11-2010]
MSH:D012595
GeneRIF:12692352
SS - Systemic sclerosis[accessedResource: SNOMEDCT:89155008][accessDate: 04-11-2010]
GeneRIF:14729510
GeneRIF:15500643
GeneRIF:15215176
GeneRIF:12374741
GeneRIF:15468358
GeneRIF:15855645
Scleroderma (& [systemic sclerosis])
Systemic sclerosis
GeneRIF:12091308
GeneRIF:12843267
GeneRIF:15722417
Scleroderma syndrome[accessedResource: SNOMEDCT:89155008][accessDate: 04-11-2010]
GeneRIF:15797863
GeneRIF:15641797
A chronic multi-system disorder of CONNECTIVE TISSUE. It is characterized by SCLEROSIS in the SKIN, the LUNGS, the HEART, the GASTROINTESTINAL TRACT, the KIDNEYS, and the MUSCULOSKELETAL SYSTEM. Other important features include diseased small BLOOD VESSELS and AUTOANTIBODIES. The disorder is named for its most prominent feature (hard skin), and classified into subsets by the extent of skin thickening: LIMITED SCLERODERMA and DIFFUSE SCLERODERMA.[accessedResource: MSH:D012595][accessDate: 04-11-2010]
PSS (progressive systemic sclerosis)[accessedResource: DOID:418][accessDate: 04-11-2010]
GeneRIF:12847692
DOID:418
GeneRIF:15622541
GeneRIF:14613485
GeneRIF:12888869
GeneRIF:12839562
GeneRIF:12618866
GeneRIF:15146426
GeneRIF:11904440
GeneRIF:14705223
SNOMEDCT:89155008
GeneRIF:12777465
GeneRIF:16112028
GeneRIF:12528118
GeneRIF:12007723
Scleroderma
GeneRIF:14662895
GeneRIF:12009077
GeneRIF:12784398
GeneRIF:12757775
GeneRIF:14872500
HES-2
HES2
Tomasz Adamusiak
PMID:10748519
GeneRIF:15289301
GeneRIF:11783119
Astrocytoma, Grade I
astroglioma[accessedResource: DOID:3069][accessDate: 10-05-2010]
Astrocytic tumour of brain[accessedResource: SNOMEDCT:254938000][accessDate: 10-05-2010]
Astrocytomas, Grade II[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytic Tumor[accessedResource: NCIt:C6958][accessDate: 10-05-2010]
GeneRIF:11922706
Astrocytomas, Grade I
Grade III Astrocytomas
Astrocytoma, Anaplastic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Grade I Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma, NOS
Astrocytoma, Juvenile Pilocytic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytic Neoplasm
Astrocytic Gliomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Diffuse astrocytoma[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Astrocytic glioma[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
A glial tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, subependymal giant cell astrocytoma, and glioblastoma.[accessedResource: NCIt:C6958][accessDate: 10-05-2010]
Protoplasmic Astrocytomas
A glial tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, subependymal giant cell astrocytoma, and glioblastoma.
Astrocytoma of brain
GeneRIF:12740910
SNOMEDCT:38713004
astrocytoma[accessedResource: DOID:3069][accessDate: 10-05-2010]
Astrocytoma
Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma, no ICD-O subtype[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
GeneRIF:16103883
Fibrillary Astrocytomas
[M]Astrocytoma NOS[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
GeneRIF:15652402
DOID:3069
[M]Astrocytoma NOS
Anaplastic Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
MSH:D001254
Astrocytoma, Cerebral[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Protoplasmic Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma, no ICD-O subtype
Subependymal Giant Cell Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma, no ICD-O subtype (morphologic abnormality)
GeneRIF:15494521
GeneRIF:12168116
GeneRIF:14603438
Cystic astrocytoma[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Gemistocytic Astrocytomas
Astrocytomas, Anaplastic
Astrocytomas, Grade I[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Duplicate with astrocytic tumor (EFO_0000272)
Pilocytic Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrogliomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Pilocytic Astrocytomas, Juvenile[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12393263
Diffuse astrocytoma, low grade
Astrocytomas, Fibrillary[accessedResource: MSH:D001254][accessDate: 10-05-2010]
astrocytoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:3069][accessDate: 10-05-2010]
GeneRIF:15643521
Cerebral Astrocytomas, Childhood
GeneRIF:12829373
Fibrillary Astrocytoma
Astrocytomas, Gemistocytic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Oligoastrocytoma, Mixed[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12519873
Cystic astrocytoma
Astrocytomas, Childhood Cerebral[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Juvenile Pilocytic Astrocytomas
Astrocytoma, Protoplasmic
Grade III Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma, NOS[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Astrocytoma, Grade III
Astrocytoma, Intracranial
GeneRIF:12850541
Astrocytoma, Grade II
Astrocytic tumor of brain
GeneRIF:12237771
GeneRIF:12023424
GeneRIF:12203396
Astrocytomas, Cerebral
Diffuse astrocytoma
GeneRIF:12385586
GeneRIF:11958417
Astrocytic Gliomas
GeneRIF:12133571
GeneRIF:14654927
GeneRIF:12077339
Astrocytoma, low grade
Glioma, Astrocytic
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation. (From Devita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2013-7; Holland et al., Cancer Medicine, 3d ed, p1082)[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytic tumour of brain
Astroglioma
Astrocytoma, Gemistocytic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Oligoastrocytomas, Mixed
Astrocytomas, Intracranial
Cerebral Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Oligoastrocytomas, Mixed[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12747804
Subependymal Giant Cell Astrocytoma
Astrocytomas, Pilocytic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12916719
Astrocytoma, low grade[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
Astrocytomas, Grade II
Astrocytoma, Fibrillary[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Grade II Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
astrocytoma of brain (disorder)
Astrocytic Neoplasm[accessedResource: NCIt:C6958][accessDate: 10-05-2010]
GeneRIF:15902504
GeneRIF:12111824
GeneRIF:15973775
1.5
NCIt:C6958
GeneRIF:14729615
Astrocytic tumor of brain[accessedResource: SNOMEDCT:254938000][accessDate: 10-05-2010]
Diffuse astrocytoma, low grade[accessedResource: SNOMEDCT:38713004][accessDate: 10-05-2010]
obsolete_astrocytic tumor
Astrocytomas
astrocytoma of brain (disorder)[accessedResource: DOID:3069][accessDate: 10-05-2010]
true
Astrocytoma, Gemistocytic
Neoplasms of the brain and spinal cord derived from glial cells which vary from histologically benign forms to highly anaplastic and malignant tumors. Fibrillary astrocytomas are the most common type and may be classified in order of increasing malignancy (grades I through IV). In the first two decades of life, astrocytomas tend to originate in the cerebellar hemispheres; in adults, they most frequently arise in the cerebrum and frequently undergo malignant transformation. (From Devita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2013-7; Holland et al., Cancer Medicine, 3d ed, p1082)
Astrogliomas
Pilocytic Astrocytomas
GeneRIF:11836615
Pilocytic Astrocytoma, Juvenile
Astrocytomas, Protoplasmic[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:15799819
Cerebral Astrocytoma
GeneRIF:12435805
Childhood Cerebral Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:12185598
Astrocytoma of brain[accessedResource: SNOMEDCT:254938000][accessDate: 10-05-2010]
Intracranial Astrocytomas[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Astrocytoma, Pilocytic
Grade III Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
GeneRIF:15178645
SNOMEDCT:254938000
James Malone
Mixed Oligoastrocytoma
Childhood Cerebral Astrocytoma
Astrocytic tumor
Anaplastic Astrocytoma
GeneRIF:12819022
Intracranial Astrocytoma[accessedResource: MSH:D001254][accessDate: 10-05-2010]
Coronary Disease
CAD[accessedResource: NCIt:C26732][accessDate: 04-11-2010]
Narrowing of the coronary arteries due to fatty deposits inside the arterial walls.
Narrowing of the coronary arteries due to fatty deposits inside the arterial walls.[accessedResource: NCIt:C26732][accessDate: 04-11-2010]
coronary artery disease
NCIt:C26732
CAD
Coronary Disease[accessedResource: NCIt:C26732][accessDate: 04-11-2010]
Tomasz Adamusiak
NCIt:C35716
idiopathic pulmonary fibrosis
Chronic and progressive fibrosis of the lung parenchyma of unknown cause.
IPF
James Malone
Chronic and progressive fibrosis of the lung parenchyma of unknown cause.[accessedResource: NCIt:C35716][accessDate: 04-11-2010]
IPF[accessedResource: NCIt:C35716][accessDate: 04-11-2010]
cryptogenic fibrosing alveolitis
Valve Stenoses, Aortic[accessedResource: MSH:D001024][accessDate: 04-11-2010]
Aortic valve stenosis is a aortic valve disease caused by the incomplete opening of the aortic valve. The aortic valve controls the direction of blood flow from the left ventricle to the aorta. When in good working order, the aortic valve does not impede the flow of blood between these two spaces. Under some circumstances, the aortic valve becomes narrower than normal, impeding the flow of blood. This is known as aortic valve stenosis, or aortic stenosis, often abbreviated as AS.
GeneRIF:14734048
Aortic valve stenosis (disorder)
Stenosed aortic valve
aortic stenosis
Stenosed aortic valve[accessedResource: SNOMEDCT:60573004][accessDate: 04-11-2010]
A pathological constriction that can occur above (supravalvular stenosis), below (subvalvular stenosis), or at the AORTIC VALVE. It is characterized by restricted outflow from the LEFT VENTRICLE into the AORTA.[accessedResource: MSH:D001024][accessDate: 04-11-2010]
Valve Stenosis, Aortic
SNOMEDCT:60573004
GeneRIF:11903341
Aortic valve stenosis is a aortic valve disease caused by the incomplete opening of the aortic valve. The aortic valve controls the direction of blood flow from the left ventricle to the aorta. When in good working order, the aortic valve does not impede the flow of blood between these two spaces. Under some circumstances, the aortic valve becomes narrower than normal, impeding the flow of blood. This is known as aortic valve stenosis, or aortic stenosis, often abbreviated AS.
James Malone
Stenoses, Aortic[accessedResource: MSH:D001024][accessDate: 04-11-2010]
Aortic valve stenosis, NOS[accessedResource: SNOMEDCT:60573004][accessDate: 04-11-2010]
Aortic valve stenosis (disorder)[accessedResource: DOID:1712][accessDate: 04-11-2010]
GeneRIF:15311863
Aortic valve stenosis, NOS
AS
Valve Stenoses, Aortic
Valve Stenosis, Aortic[accessedResource: MSH:D001024][accessDate: 04-11-2010]
Stenoses, Aortic
A pathological constriction that can occur above (supravalvular stenosis), below (subvalvular stenosis), or at the AORTIC VALVE. It is characterized by restricted outflow from the LEFT VENTRICLE into the AORTA.
AS - Aortic stenosis[accessedResource: SNOMEDCT:60573004][accessDate: 04-11-2010]
AS[accessedResource: DOID:1712][accessDate: 04-11-2010]
Aortic valve stenosis is a aortic valve disease caused by the incomplete opening of the aortic valve. The aortic valve controls the direction of blood flow from the left ventricle to the aorta. When in good working order, the aortic valve does not impede the flow of blood between these two spaces. Under some circumstances, the aortic valve becomes narrower than normal, impeding the flow of blood. This is known as aortic valve stenosis, or aortic stenosis, often abbreviated AS.[accessedResource: DOID:1712][accessDate: 04-11-2010]
AS - Aortic stenosis
MSH:D001024
DOID:1712
STRUCTURE_Formula:[(1S)-1-{[(7-bromo-2,3-dioxo-1,2,3,4-tetrahydroquinoxalin-5-yl)methyl]amino}ethyl]phosphonic acid
Tomasz Adamusiak
Ele Holloway
CASRN:206648-13-7
James Malone
CGP 78608 hydrochloride
PAMQX; [(1S)-1-[[(7-bromo-1,2,3,4-tetrahydro-2,3-dioxo-5-quino xalinyl)methyl]amino]ethyl]phosphonic acid hydrochloride
DSSTox_CID:42566
DSSTox_Generic_SID:C11H14BrClN3O5P
caerulein
17650-98-5
40434
5-oxo-L-prolyl-L-glutaminyl-L-a-aspartyl-O-sulfo-L-tyrosyl-L-threonylglycyl-L-tryptophyl-L-methionyl-L-a-aspartyl-L-phenylalaninamide
C58H73N13O21S2
HRE
Human Renal Epithelial cell line
skeletal system of head
skeletal system of head[accessedResource: MAT:0000149][accessDate: 10-05-2010]
chondrocranium
James Malone
obsolete_craniofacial skeleton bone
ZFA:0000737
FMAID:87596
neurocranium[accessedResource: TAO:0001424][accessDate: 10-05-2010]
FMAID:46565
neurocranium
EMAPA:17680
cranium[accessedResource: ZFA:0000737][accessDate: 10-05-2010]
chondocranium[accessedResource: TAO:0001424][accessDate: 10-05-2010]
chondrocranium[accessedResource: TAO:0001424][accessDate: 10-05-2010]
MA:0000316
craniofacial skeleton bone
true
Skeletal system that is part of the head, including the splanchnocranium, chondrocranium, and dermatocranium.[accessedResource: ZFA:0000737][accessDate: 10-05-2010]
TAO:0001424
cranial skeleton[accessedResource: MAT:0000149][accessDate: 10-05-2010]
skull bone
craniofacial skeleton bone[accessedResource: MAT:0000149][accessDate: 10-05-2010]
Anatomical cluster that is part of the cranium and composed of cartilage and cartilage replacement bones.[accessedResource: TAO:0001424][accessDate: 10-05-2010]
MAT:0000149
chondocranium
cranium
Anatomical cluster that is part of the cranium and composed of cartilage and cartilage replacement bones.
skull bone[accessedResource: MAT:0000149][accessDate: 10-05-2010]
1.8
Synonym with cranium, use cranium instead.
Subdivision of skeletal system which consists of the skeleton of the head and its joints.[accessedResource: FMAID:46565][accessDate: 10-05-2010]
Subdivision of skeletal system which consists of the skeleton of the head and its joints.
AAO:0000109
EHDAA:6029
Skeletal system that is part of the head, including the splanchnocranium, chondrocranium, and dermatocranium.
cranial skeleton
Tomasz Adamusiak
lateral cord glia
FBbt:00005673
Tomasz Adamusiak
opercle
ZFA:0000250
Human Papilloma Virus Infection
NCIt:C27851
Human Papilloma Virus Infection[accessedResource: NCIt:C27851][accessDate: 04-11-2010]
HPV
James Malone
human papilloma virus
James Malone
H209
GeneRIF:15286165
Dysfunctions, Liver[accessedResource: MSH:D008107][accessDate: 04-11-2010]
Liver disorder NOS (disorder)
SNOMEDCT:235856003
Any disease or dysfunction of the liver and the intrahepatic bile ducts.[accessedResource: NCIt:C3196][accessDate: 04-11-2010]
Unspecified disorder of liver[accessedResource: DOID:409][accessDate: 04-11-2010]
GeneRIF:12085365
GeneRIF:15653097
hepatic disorder
GeneRIF:12557137
Liver disorder in pregnancy, with delivery[accessedResource: DOID:409][accessDate: 04-11-2010]
SNOMEDCT:197375001
Liver Dysfunction
Liver Diseases
[X]Diseases of the liver (disorder)[accessedResource: SNOMEDCT:197551000][accessDate: 04-11-2010]
[X]Diseases of the liver[accessedResource: SNOMEDCT:197551000][accessDate: 04-11-2010]
GeneRIF:15246202
liver disorder antepartum
Liver disorder in pregnancy - delivered (disorder)
Liver disorder in pregnancy unspecified (disorder)[accessedResource: DOID:409][accessDate: 04-11-2010]
Liver disorder in pregnancy (disorder)[accessedResource: DOID:409][accessDate: 04-11-2010]
disease of the liver (disorder)
GeneRIF:15842357
Liver disorder NOS (disorder)[accessedResource: DOID:409][accessDate: 04-11-2010]
GeneRIF:14624764
Liver disorder NOS
GeneRIF:16339124
GeneRIF:12297838
GeneRIF:12794718
Liver disorder in pregnancy NOS (disorder)
GeneRIF:11898128
Hepatopathy
Pathological processes of the LIVER.
Liver disorder in pregnancy - delivered (disorder)[accessedResource: DOID:409][accessDate: 04-11-2010]
GeneRIF:15661915
Disorder of liver (disorder)[accessedResource: SNOMEDCT:235856003][accessDate: 04-11-2010]
GeneRIF:11929053
GeneRIF:11810299
Liver disorder in pregnancy, unspecified as to episode of care
Disorder of liver[accessedResource: SNOMEDCT:235856003][accessDate: 04-11-2010]
GeneRIF:15719405
[X]Diseases of the liver (disorder)
liver disorder antepartum[accessedResource: DOID:409][accessDate: 04-11-2010]
Liver Dysfunction[accessedResource: MSH:D008107][accessDate: 04-11-2010]
LIVER DIS[accessedResource: MSH:D008107][accessDate: 04-11-2010]
GeneRIF:15774823
hepatic disorder[accessedResource: DOID:409][accessDate: 04-11-2010]
Liver disorder in pregnancy
LIVER DIS
GeneRIF:15944310
GeneRIF:12532447
GeneRIF:12143056
NCIt:C3196
liver disease
GeneRIF:12445411
liver disorder[accessedResource: DOID:409][accessDate: 04-11-2010]
GeneRIF:12000722
liver disorder in pregnancy - delivered
GeneRIF:12724528
GeneRIF:12705907
GeneRIF:15235035
GeneRIF:15969449
disorder of liver (disorder)
Liver Disorder
Dysfunctions, Liver
Liver disorder in pregnancy, with delivery
disease of the liver (disorder)[accessedResource: DOID:409][accessDate: 04-11-2010]
Disease of liver
Pathological processes of the LIVER.[accessedResource: MSH:D008107][accessDate: 04-11-2010]
Diseases, Liver[accessedResource: MSH:D008107][accessDate: 04-11-2010]
GeneRIF:12148114
GeneRIF:15112358
Liver disorder in pregnancy[accessedResource: DOID:409][accessDate: 04-11-2010]
GeneRIF:12029628
Unspecified disorder of liver
GeneRIF:11929052
Liver disorder NOS[accessedResource: DOID:409][accessDate: 04-11-2010]
Hepatopathy[accessedResource: SNOMEDCT:235856003][accessDate: 04-11-2010]
Liver disorder in pregnancy, unspecified as to episode of care[accessedResource: DOID:409][accessDate: 04-11-2010]
MSH:D008107
Disorder of liver
disease of liver [Ambiguous]
liver disorder in pregnancy - delivered[accessedResource: DOID:409][accessDate: 04-11-2010]
Any disease or dysfunction of the liver and the intrahepatic bile ducts.
Liver disorder in pregnancy NOS (disorder)[accessedResource: DOID:409][accessDate: 04-11-2010]
Liver disorder in pregnancy unspecified (disorder)
Liver disorder in pregnancy (disorder)
LD - Liver disease[accessedResource: SNOMEDCT:235856003][accessDate: 04-11-2010]
disease of liver [Ambiguous][accessedResource: DOID:409][accessDate: 04-11-2010]
GeneRIF:12149233
LD - Liver disease
DOID:409
[X]Diseases of the liver
ICD9:573.9
GeneRIF:12823592
GeneRIF:15377291
GeneRIF:12823590
GeneRIF:12830005
GeneRIF:12006706
James Malone
SNOMEDCT:197551000
Disease of liver[accessedResource: SNOMEDCT:235856003][accessDate: 04-11-2010]
Ele Holloway
James Malone
SW756
Ele Holloway
James Malone
Fu97
Tomasz Adamusiak
ectopterygoid
ZFA:0000656
Tomasz Adamusiak
DSSTox_Generic_SID:42619
RS 39604 hydrochloride
STRUCTURE_ChemicalName_IUPAC:N-{2-[4-(3-{4-amino-5-chloro-2-[(3,5-dimethoxybenzyl)oxy]phenyl}-3-oxopropyl)piperidin-1-yl]ethyl}methanesulfonamide hydrochloride
DSSTox_CID:22619
Ele Holloway
James Malone
STRUCTURE_Formula:C26H37Cl2N3O6S
CASRN:167710-87-4
chlorhexidine
55-56-1
James Malone
CS57824 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158848&type=germplasm
CS57824
http://www.arabidopsis.org/servlets/TairObject?id=1005158848&type=germplasm
Ele Holloway
James Malone
Capan2
Capan-2
obsolete_caudate nucleus
Caudate Nucleus[accessedResource: NCIt:C12451][accessDate: 10-05-2010]
NCIt:C12451
Caudate Nucleus
Nucleus Caudatus[accessedResource: NCIt:C12451][accessDate: 10-05-2010]
An elongated gray mass of the neostriatum located adjacent to the lateral ventricle of the brain. (MeSH)[accessedResource: NCIt:C12451][accessDate: 10-05-2010]
An elongated gray mass of the neostriatum located adjacent to the lateral ventricle of the brain. (MeSH)
Nucleus Caudatus
Duplicated term, use EFO_0000907
true
James Malone
GM12005
CHEBI:50855
James Malone
http://www.ebi.ac.uk/efo/EFO_0001838
antiatherogenic agent
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#loop_design[accessedResource: MO_912][accessDate: 04-11-2010]
Tomasz Adamusiak
loop design
MO_912
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#loop_design
A fold of skin that covers the glans of the penis.
prepuce[accessedResource: BTO:0001113][accessDate: 04-11-2010]
BTO:0001113
James Malone
foreskin
prepuce
A fold of skin that covers the glans of the penis.[accessedResource: BTO:0001113][accessDate: 04-11-2010]
Tomasz Adamusiak
rib
FMAID:7574
suppressor T-lymphocyte
regulatory T lymphocyte
A T cell which regulates overall immune responses as well as the responses of other T cell subsets through direct cell-cell contact and cytokine release.[accessedResource: CL:0000815][accessDate: 04-11-2010]
CL:0000815
suppressor T-cell
suppressor T-lymphocyte[accessedResource: CL:0000815][accessDate: 04-11-2010]
suppressor T cell[accessedResource: CL:0000815][accessDate: 04-11-2010]
regulatory T-lymphocyte[accessedResource: CL:0000815][accessDate: 04-11-2010]
regulatory T-cell
pancreatic T regulatory cell
James Malone
A T cell which regulates overall immune responses as well as the responses of other T cell subsets through direct cell-cell contact and cytokine release.
Tomasz Adamusiak
olfactory pit
ZFA:0000130
Inguinal
NCIt:C12726
James Malone
iliac region
inguinal region
Inguinal[accessedResource: NCIt:C12726][accessDate: 04-11-2010]
The lower region of the anterior abdominal wall located laterally to the pubic region.[accessedResource: NCIt:C12726][accessDate: 04-11-2010]
The lower region of the anterior abdominal wall located laterally to the pubic region.
Groin
Groin[accessedResource: NCIt:C12726][accessDate: 04-11-2010]
Smoldering Plasma Cell Myeloma
asymptomatic myeloma
A plasma cell myeloma lacking clinical manifestations and organ impairment.
smoldering myeloma
NCIt:C7149
Smoldering Myeloma[accessedResource: NCIt:C7149][accessDate: 04-11-2010]
Tomasz Adamusiak
Asymptomatic Plasma Cell Myeloma[accessedResource: NCIt:C7149][accessDate: 04-11-2010]
A plasma cell myeloma lacking clinical manifestations and organ impairment.[accessedResource: NCIt:C7149][accessDate: 04-11-2010]
Asymptomatic Plasma Cell Myeloma
Smoldering Plasma Cell Myeloma[accessedResource: NCIt:C7149][accessDate: 04-11-2010]
James Malone
C2C12
1,4-dithiothreitol
03/12/3483
DTT; dithiothreitol
FMAID:25245
Gluteal part of pelvic girdle[accessedResource: FMAID:25245][accessDate: 04-11-2010]
Gluteal region[accessedResource: FMAID:25245][accessDate: 04-11-2010]
Clunis
Clunis[accessedResource: FMAID:25245][accessDate: 04-11-2010]
Gluteal region
Tomasz Adamusiak
buttock
Gluteal part of pelvic girdle
vasa deferentia
Vas deferens
TADS:0000486
Vas deferens[accessedResource: FMAID:19234][accessDate: 04-11-2010]
James Malone
SAEL:120
EV:0100105
FMAID:19234
deferent duct
EMAPA:18681
MA:0000413
MAT:0000129
vasa deferentia[accessedResource: MAT:0000129][accessDate: 04-11-2010]
deferent duct[accessedResource: MAT:0000129][accessDate: 04-11-2010]
WBbt:0005337
ductus deferens
FBbt:00004968
Wound
James Malone
NCIt:C3671
Tomasz Adamusiak
injury
Wound[accessedResource: NCIt:C3671][accessDate: 04-11-2010]
Damage inflicted on the body as the direct or indirect result of an external force, with or without disruption of structural continuity.[accessedResource: NCIt:C3671][accessDate: 04-11-2010]
Trauma[accessedResource: NCIt:C3671][accessDate: 04-11-2010]
Trauma
Damage inflicted on the body as the direct or indirect result of an external force, with or without disruption of structural continuity.
Tomasz Adamusiak
presumptive ventral fin fold
ZFA:0005103
Ele Holloway
James Malone
Tomasz Adamusiak
cadmium chloride 2.5-hydrate
CASRN: 7790-78-5
Jie Zheng
Tomasz Adamusiak
embryonic day 13.5
Tomasz Adamusiak
renal tubule
ZFA:0001287
Tomasz Adamusiak
retroarticular
ZFA:0000422
"anlagen in statu nascendi" are domains that do not yet coincide 1:1 with a later organ. Anlagen in statu nascendi are typically defined for the early blastoderm by the expression domains of genes which, in the late blastoderm or later, are expressed in specific anlagen, but initially come on in larger domains.[accessedResource: FBbt:00005413][accessDate: 04-11-2010]
A0[accessedResource: FBbt:00005413][accessDate: 04-11-2010]
James Malone
"anlagen in statu nascendi" are domains that do not yet coincide 1:1 with a later organ. Anlagen in statu nascendi are typically defined for the early blastoderm by the expression domains of genes which, in the late blastoderm or later, are expressed in specific anlagen, but initially come on in larger domains.
anlage in statu nascendi
FBbt:00005413
A0
early normoblast[accessedResource: CL:0000549][accessDate: 04-11-2010]
CL:0000549
basophilic normoblast[accessedResource: CL:0000549][accessDate: 04-11-2010]
early erythroblast[accessedResource: CL:0000549][accessDate: 04-11-2010]
A nucleated immature erythrocyte, having cytoplasm generally similar to that of the earlier proerythroblast but sometimes even more basophilic, and usually regular in outline. The nucleus is still relatively large, but the chromatin strands are thicker and more deeply staining, giving a coarser appearance; the nucleoli have disappeared. This cell is CD71-positive and lacks hematopoeitic lineage markers.[accessedResource: CL:0000549][accessDate: 04-11-2010]
basophilic normoblast
Tomasz Adamusiak
Jie Zheng
A nucleated immature erythrocyte, having cytoplasm generally similar to that of the earlier proerythroblast but sometimes even more basophilic, and usually regular in outline. The nucleus is still relatively large, but the chromatin strands are thicker and more deeply staining, giving a coarser appearance; the nucleoli have disappeared. This cell is CD71-positive and lacks hematopoeitic lineage markers.
early normoblast
basophilic erythroblast
early erythroblast
prorubricyte
prorubricyte[accessedResource: CL:0000549][accessDate: 04-11-2010]
A nucleated immature erythrocyte, having cytoplasm generally similar to that of the earlier proerythroblast but sometimes even more basophilic, and usually regular in outline. The nucleus is still relatively large, but the chromatin strands are thicker and more deeply staining, giving a coarser appearance; the nucleoli have disappeared.
http://www.ebi.ac.uk/efo/EFO_0001517
cytochalasin B
CHEBI:23527
CHEBI:17029
InChI=1/C24H41N3O16/c1-7(31)25-13-18(36)20(11(5-29)39-22(13)38)42-24-15(27-9(3)33)19(37)21(12(6-30)41-24)43-23-14(26-8(2)32)17(35)16(34)10(4-28)40-23/h10-24,28-30,34-38H,4-6H2,1-3H3,(H,25,31)(H,26,32)(H,27,33)/t10-,11-,12-,13-,14-,15-,16-,17-,18-,19-,20-,21-,22-,23+,24+/m1/s1/f/h25-27H
InChIKey=WZZVUHWLNMNWLW-IRGKDUGGDK
A N-acylglucosamine that has formula (C8H13NO5)n.
(1->4)-2-acetamido-2-deoxy-beta-D-glucan
[1,4-(N-Acetyl-beta-D-glucosaminyl)]n
[4)-beta-D-GlcpNAc(1->]n
http://www.ebi.ac.uk/efo/EFO_0001502
An aminoglycan that has formula (C8H13NO5)n.
chitin
(C8H13NO5)n
beta-1,4-Poly-N-acetyl-D-glucosamine
benomyl
17804-35-2
23900
C14H18N4O3
methyl {1-[(butylamino)carbonyl]-1H-benzimidazol-2-yl}carbamate
An aggressive carcinoma with a poor prognosis characterized by a presence of both malignant squamous cells and glandular cells.[accessedResource: NCIt:C9133][accessDate: 04-11-2010]
DOID:4829
An aggressive carcinoma with a poor prognosis characterized by a presence of both malignant squamous cells and glandular cells.
adenosquamous cell lung carcinoma
adenosquamous lung carcinoma
adenosquamous cell lung carcinoma[accessedResource: DOID:4829][accessDate: 04-11-2010]
NCIt:C9133
James Malone
A complex disorder characterized by infertility, HIRSUTISM; OBESITY; and various menstrual disturbances such as OLIGOMENORRHEA; AMENORRHEA; ANOVULATION. Polycystic ovary syndrome is usually associated with bilateral enlarged ovaries studded with atretic follicles, not with cysts. The term, polycystic ovary, is misleading.[accessedResource: MSH:D011085][accessDate: 04-11-2010]
polycystic ovary
Syndrome, Stein-Leventhal[accessedResource: MSH:D011085][accessDate: 04-11-2010]
GeneRIF:15757855
GeneRIF:14764797
GeneRIF:12849814
SNOMEDCT:69878008
GeneRIF:14671186
GeneRIF:12502516
GeneRIF:15950665
GeneRIF:15533384
GeneRIF:15653207
GeneRIF:16030171
GeneRIF:15292352
GeneRIF:16275260
polycystic ovary syndrome
GeneRIF:15862282
GeneRIF:12620441
Polycystic Ovarian Disease[accessedResource: NCIt:C26862][accessDate: 04-11-2010]
GeneRIF:15516780
GeneRIF:15926113
Polycystic ovarian syndrome
GeneRIF:11809921
GeneRIF:16159937
GeneRIF:12050223
PCOD - Polycystic ovarian disease[accessedResource: SNOMEDCT:69878008][accessDate: 04-11-2010]
PCO - Polycystic ovaries[accessedResource: SNOMEDCT:69878008][accessDate: 04-11-2010]
GeneRIF:15950642
Ovaries, Sclerocystic
MSH:D011085
GeneRIF:14684846
Cystic disease of ovaries[accessedResource: SNOMEDCT:69878008][accessDate: 04-11-2010]
GeneRIF:15695318
ICD9:256.4
GeneRIF:12477518
GeneRIF:12923129
GeneRIF:15598676
GeneRIF:12857430
Cystic disease of ovaries
Stein-Leventhal synd.[accessedResource: DOID:11612][accessDate: 04-11-2010]
GeneRIF:15233555
NCIt:C27086
Multicystic ovaries[accessedResource: DOID:11612][accessDate: 04-11-2010]
Polycystic ovaries (disorder)[accessedResource: DOID:11612][accessDate: 04-11-2010]
PCOS
NCIt:C26862
Polycystic ovarian disease
GeneRIF:15191349
GeneRIF:12161545
DOID:11612
PCOS[accessedResource: DOID:11612][accessDate: 04-11-2010]
GeneRIF:15010862
GeneRIF:16084882
PCOD - Polycystic ovarian disease
Ovary, Sclerocystic
James Malone
GeneRIF:12213887
GeneRIF:15886251
Polycystic ovaries[accessedResource: DOID:11612][accessDate: 04-11-2010]
GeneRIF:15240646
GeneRIF:15155816
GeneRIF:14602801
GeneRIF:12396555
GeneRIF:15624269
GeneRIF:12574198
Polycystic ovaries (disorder)
GeneRIF:14688155
Stein-Leventhal Syndrome
GeneRIF:15374726
GeneRIF:12519859
GeneRIF:15588467
GeneRIF:15579759
Ovary, Sclerocystic[accessedResource: MSH:D011085][accessDate: 04-11-2010]
Multicystic ovaries
Sclerocystic Ovary Syndrome
GeneRIF:12857431
PCOS - Polycystic ovarian syndrome[accessedResource: SNOMEDCT:69878008][accessDate: 04-11-2010]
PCOS - Polycystic ovarian syndrome
GeneRIF:15333250
GeneRIF:14764802
GeneRIF:12679434
A complex disorder characterized by infertility, HIRSUTISM; OBESITY; and various menstrual disturbances such as OLIGOMENORRHEA; AMENORRHEA; ANOVULATION. Polycystic ovary syndrome is usually associated with bilateral enlarged ovaries studded with atretic follicles, not with cysts. The term, polycystic ovary, is misleading.
GeneRIF:14671196
GeneRIF:14561641
Ovarian Degeneration, Sclerocystic[accessedResource: MSH:D011085][accessDate: 04-11-2010]
GeneRIF:14669168
GeneRIF:14644808
GeneRIF:15057670
GeneRIF:15985479
Polycystic ovarian syndrome[accessedResource: SNOMEDCT:69878008][accessDate: 04-11-2010]
GeneRIF:12615821
Sclerocystic Ovary Syndrome[accessedResource: MSH:D011085][accessDate: 04-11-2010]
Sclerocystic Ovarian Degeneration
GeneRIF:12161543
Ovaries, Sclerocystic[accessedResource: MSH:D011085][accessDate: 04-11-2010]
polycystic ovary[accessedResource: DOID:11612][accessDate: 04-11-2010]
Stein-Leventhal synd.
GeneRIF:16213847
GeneRIF:12727985
GeneRIF:14715867
GeneRIF:15731326
GeneRIF:15178661
PCO - Polycystic ovaries
GeneRIF:15533361
GeneRIF:14671199
Polycystic ovaries
GeneRIF:12364442
GeneRIF:14671189
GeneRIF:15705377
Ele Holloway
James Malone
Tomasz Adamusiak
8-bromo-cyclic GMP
CASRN:51116-01-9
8-Br-cGMP
James Malone
THP-1
THP1
http://www.ebi.ac.uk/efo/EFO_0001563
Any of two trienoic essential fatty acids; a nutrient essential to the formation of prostaglandins. Also used in making paints and synthetic resins.
linoleic acids
CHEBI:25048
linolenic acid
linolenic acids
4-hydroxynon-2-enal
http://www.ebi.ac.uk/efo/EFO_0001472
4-Hydroxy-2,3-nonenal
InChI=1/C9H16O2/c1-2-3-4-6-9(11)7-5-8-10/h5,7-9,11H,2-4,6H2,1H3
4-Hydroxynonenal
[H]C(=CC=O)C(O)CCCCC
CHEBI:32585
A hydroxyaldehyde that has formula C9H16O2.
InChIKey=JVJFIQYAHPMBBX-UHFFFAOYAI
C9H16O2
4-hydroxy-2-nonenal
NSCLC[accessedResource: DOID:3908][accessDate: 04-11-2010]
Non-small cell lung cancer (disorder)[accessedResource: DOID:3908][accessDate: 04-11-2010]
Tomasz Adamusiak
non-small cell lung carcinoma
DOID:3908
NSCLC
Non-small cell lung cancer (disorder)
quinoline
1798
21798
91-22-5
C9H7N
quinoline
GeneRIF:12556907
Mental disease
GeneRIF:15341606
ICD9:307.9
Mental disorder (disorder)
2.5
Other and unspecified special symptoms or syndromes, not elsewhere classified
GeneRIF:14966479
GeneRIF:12814372
[X]Mental illness NOS
EATING DISORDER NEC[accessedResource: ICD9:307.59][accessDate: 10-05-2010]
DOID:150
Other and unspecified special symptoms or syndromes, not elsewhere classified[accessedResource: ICD9:307.9][accessDate: 10-05-2010]
Mental disorders NOS (disorder)
GeneRIF:14645456
ICD9:300-316.99
Mental health disorder
A disease of or relating to the manner that an organism conducts itself involving action and response to stimulation or the response of an individual, group, or species to its environment.[accessedResource: DOID:150][accessDate: 10-05-2010]
[X]Other eating disorders[accessedResource: SNOMEDCT:268721001][accessDate: 10-05-2010]
Mental disorder[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
Psychiatric illness
ICD9:307.5
Mental disorders NOS[accessedResource: SNOMEDCT:192639003][accessDate: 10-05-2010]
Mental illness
SPECIAL SYMPTOM NEC/NOS[accessedResource: ICD9:307.9][accessDate: 10-05-2010]
Mental disorder
GeneRIF:15386212
Mental disorders NOS
SNOMEDCT:268721001
Mental disorder, NOS
[X]Mental disorder, not otherwise specified (disorder)
GeneRIF:12605098
obsolete_behavioural disease
GeneRIF:12082566
Mental disorders NOS (disorder)[accessedResource: SNOMEDCT:192639003][accessDate: 10-05-2010]
Psychiatric disorder[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
[X]Other eating disorders
ICD9:290-319.99
Psychiatric disorder
SNOMEDCT:192639003
[X]Mental illness NOS[accessedResource: SNOMEDCT:192637001][accessDate: 10-05-2010]
SNOMEDCT:74732009
Mental illness[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
merged with EFO_0000677
SPECIAL SYMPTOM NEC/NOS
[X]Mental disorder, not otherwise specified[accessedResource: SNOMEDCT:192637001][accessDate: 10-05-2010]
ICD9:307
Mental disorder (disorder)[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
Psychiatric illness[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
[X]Mental disorder, not otherwise specified
A disease of or relating to the manner that an organism conducts itself involving action and response to stimulation or the response of an individual, group, or species to its environment.
behavioral disease
GeneRIF:11884350
[X]Other eating disorders (disorder)
GeneRIF:12218657
James Malone
EATING DISORDER NEC
GeneRIF:14744462
SNOMEDCT:192637001
Mental health disorder[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
Mental disease[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
true
Other disorders of eating
[X]Other eating disorders (disorder)[accessedResource: SNOMEDCT:268721001][accessDate: 10-05-2010]
Other disorders of eating[accessedResource: ICD9:307.59][accessDate: 10-05-2010]
ICD9:307.59
GeneRIF:14523627
Mental disorder, NOS[accessedResource: SNOMEDCT:74732009][accessDate: 10-05-2010]
[X]Mental disorder, not otherwise specified (disorder)[accessedResource: SNOMEDCT:192637001][accessDate: 10-05-2010]
GM12891
James Malone
OntologyMappingImporter following DOID:1040
true
Duplicate with chronic lymphocytic leukemia (EFO_0000095) use this instead
obsolete_chronic lymphocytic leukemia
CLL
chronic lymphoid leukemia
adult metathoracic wing[accessedResource: MAT:0000202][accessDate: 04-11-2010]
MAT:0000202
adult metathoracic wing
In adult pterygotous insects, one of the paired organs of flight occurring on the mesothoracic segment.[accessedResource: TGMA:0000196][accessDate: 04-11-2010]
In adult pterygotous insects, the paired organs of flight occurring on the metathoracic segment. In Diptera, the metathoracic wings are represented by the halteres.
A flight organ of the adult external thorax that is derived from a dorsal mesothoracic disc.[accessedResource: FBbt:00004729][accessDate: 04-11-2010]
wing
FBbt:00004729
A flight organ of the adult external thorax that is derived from a dorsal mesothoracic disc.
adult mesothoracic wing[accessedResource: TGMA:0000196][accessDate: 04-11-2010]
James Malone
TGMA:0000196
BTO:0001463
In adult pterygotous insects, one of the paired organs of flight occurring on the mesothoracic segment.
1: One of the movable feathered or membranous paired appendages by means of which a bird, bat, or insect is able to fly; also: such an appendage even though rudimentary if possessed by an animal belonging to a group characterized by the power of flight.n2: Any of various anatomical structures especially of a flying fish or flying lemur providing means of limited flight.[accessedResource: BTO:0001463][accessDate: 04-11-2010]
TGMA:0000197
1: One of the movable feathered or membranous paired appendages by means of which a bird, bat, or insect is able to fly; also: such an appendage even though rudimentary if possessed by an animal belonging to a group characterized by the power of flight.n2: Any of various anatomical structures especially of a flying fish or flying lemur providing means of limited flight.
adult mesothoracic wing
In adult pterygotous insects, the paired organs of flight occurring on the metathoracic segment. In Diptera, the metathoracic wings are represented by the halteres.[accessedResource: TGMA:0000197][accessDate: 04-11-2010]
genital system disease
DOID:15
Tomasz Adamusiak
Disorder of reproductive system
reproductive system disease
SNOMEDCT:362968007
Disorder of reproductive system (disorder)[accessedResource: SNOMEDCT:362968007][accessDate: 04-11-2010]
James Malone
Disorder of reproductive system[accessedResource: SNOMEDCT:362968007][accessDate: 04-11-2010]
Non-neoplastic Reproductive system disease[accessedResource: DOID:15][accessDate: 04-11-2010]
genital system disease[accessedResource: DOID:15][accessDate: 04-11-2010]
Disorder of reproductive system (disorder)
Non-neoplastic Reproductive system disease
James Malone
oral squamous cell carcinoma
http://www.ebi.ac.uk/efo/EFO_0001490
Fibrous incombustible mineral composed of magnesium and calcium silicates with or without other elements.
asbestos
CHEBI:46661
Asbest
asbesto
Tomasz Adamusiak
valvula cerebelli
ZFA:0000603
James Malone
CS57884 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158908&type=germplasm
CS57884
http://www.arabidopsis.org/servlets/TairObject?id=1005158908&type=germplasm
B-2 B lymphocyte
B-2 B cell
B-0 B cell[accessedResource: CL:0000822][accessDate: 04-11-2010]
B-0 B cell
B-2 B lymphocyte[accessedResource: CL:0000822][accessDate: 04-11-2010]
small pre-BII cell
A conventional B cell subject to antigenic stimulation and dependent on T cell help and with a distinct surface marker expression pattern from B-1 B cells. These cells are CD43-negative.[accessedResource: CL:0000822][accessDate: 04-11-2010]
follicular B cell
large pre-BII cell
CL:0000822
A conventional B cell subject to antigenic stimulation and dependent on T cell help and with a distinct surface marker expression pattern from B-1 B cells. These cells are CD43-negative.
follicular B cell[accessedResource: CL:0000822][accessDate: 04-11-2010]
James Malone
Tomasz Adamusiak
pharyngeal pouch 1
ZFA:0001128
Tomasz Adamusiak
anterior lateral line placode
ZFA:0001316
CL:0000842
A leukocyte with a single non-segmented nucleus in the mature form.
A cell having only one nucleus, especially: MONOCYTE.
James Malone
A leukocyte with a single non-segmented nucleus in the mature form.[accessedResource: CL:0000842][accessDate: 04-11-2010]
A cell having only one nucleus, especially: MONOCYTE.[accessedResource: BTO:0000878][accessDate: 04-11-2010]
BTO:0000878
peripheral blood mononuclear cell
Peripheral blood mononuclear cell[accessedResource: CL:0000842][accessDate: 04-11-2010]
mononuclear cell
Ele Holloway
James Malone
Tomasz Adamusiak
tumor necrosis factor-alpha
CASRN:308079-78-9
DSSTox_CID:40634
TNF-alpha; tumor necrosis factor
James Malone
sap
MAT:0000350
Ele Holloway
James Malone
DMS273
CHEBI:45081
InChI=1/C19H24N4O2/c20-18(21)14-4-8-16(9-5-14)24-12-2-1-3-13-25-17-10-6-15(7-11-17)19(22)23/h4-11H,1-3,12-13H2,(H3,20,21)(H3,22,23)/f/h20,22H,21,23H2
4,4'-(pentamethylenedioxy)dibenzamidine
4,4'-[pentane-1,5-diylbis(oxy)]dibenzenecarboximidamide
p,p'-(pentamethylenedioxy)dibenzamidine
A carboxamidine that has formula C19H24N4O2.
C19H24N4O2
NC(=N)c1ccc(OCCCCCOc2ccc(cc2)C(N)=N)cc1
http://www.ebi.ac.uk/efo/EFO_0001590
pentamidine
4,4'-(1,5-pentanediylbis(oxy))bis-benzenecarboximidamide
InChIKey=XDRYMKDFEDOLFX-JODGMDMNCA
1,5-bis(4-amidinophenoxy)pentane
James Malone
ZR75B
James Malone
WB-F344
Ele Holloway
Respiratory Muscles[accessedResource: NCIt:C32824][accessDate: 04-11-2010]
James Malone
intercostal muscle
FMA:13354
NCIt:C32824
Respiratory Muscles
Ele Holloway
James Malone
simple cystadenoma
Ele Holloway
James Malone
NCI-H1092
ENCODE cell line
Tomasz Adamusiak
posterior lateral line ganglion
ZFA:0001314
A cell of the embryo.[accessedResource: CL:0002321][accessDate: 04-11-2010]
Tomasz Adamusiak
A cell of the embryo.
embryonic cell
CL:0002321
true
2.5
use EFO_0000198
obsolete_myelodysplastic syndrome (MDS)-like
Tomasz Adamusiak
ILSXISS114/TejJ
http://jaxmice.jax.org/strain/009292.html
An intermediate usually quiescent stage of a metamorphic insect (as a bee, moth, or beetle) that occurs between the larva and the imago, is usually enclosed in a cocoon or protective covering, and undergoes internal changes by which larval structures are replaced by those typical of the imago.[accessedResource: BTO:0001143][accessDate: 04-11-2010]
An intermediate usually quiescent stage of a metamorphic insect (as a bee, moth, or beetle) that occurs between the larva and the imago, is usually enclosed in a cocoon or protective covering, and undergoes internal changes by which larval structures are replaced by those typical of the imago.
pupa
BTO:0001143
Tomasz Adamusiak
axial hypoblast
ZFA:0001378
cyclophosphamide
20364
364
50-18-0
C7H15Cl2N2O2P
N,N-bis(2-chloroethyl)-1,3,2-oxazaphosphinan-2-amine 2-oxide
Ele Holloway
James Malone
NCI-H2122
Sacral bone[accessedResource: FMAID:16202][accessDate: 04-11-2010]
Sacrum [sacral vertebrae I - V][accessedResource: FMAID:16202][accessDate: 04-11-2010]
Tomasz Adamusiak
sacrum
FMAID:16202
Sacral bone
Sacrum [sacral vertebrae I - V]
5S,6R-LipoxinA4
lipoxin A4
InChIKey=IXAQOQZEOGMIQS-RKIRPOAEDD
Tomasz Adamusiak
C20H32O5
InChI=1/C20H32O5/c1-2-3-8-12-17(21)13-9-6-4-5-7-10-14-18(22)19(23)15-11-16-20(24)25/h4-7,9-10,13-14,17-19,21-23H,2-3,8,11-12,15-16H2,1H3,(H,24,25)/b6-4-,7-5+,13-9+,14-10+/t17-,18+,19-/m0/s1/f/h24H
A lipoxin that has formula C20H32O5.
(5S,6R,7E,9E,11Z,13E,15S)-5,6,15-trihydroxyicosa-7,9,11,13-tetraenoic acid
CCCCC[C@H](O)\\C=C\\C=C/C=C/C=C/[C@@H](O)[C@@H](O)CCCC(O)=O
5S,6R,15S-Trihydroxy-7E,9E,11Z,13E-eicosatetraenoic acid
http://www.ebi.ac.uk/efo/EFO_0001565
LXA4
NIFSTD:nifext_5168
Ele Holloway
James Malone
IBL4
CHEBI:18145
5,7,8-trimethyltocol
(2R)-2,5,7,8-tetramethyl-2-[(4R,8R)-4,8,12-trimethyltridecyl]-3,4-dihydro-2H-chromen-6-ol
James Malone
(R,R,R)-alpha-tocopherol
An alpha-tocopherol that has formula C29H50O2.
Vitamin E
(2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL
CC(C)CCC[C@@H](C)CCC[C@@H](C)CCC[C@]1(C)CCc2c(C)c(O)c(C)c(C)c2O1
InChI=1/C29H50O2/c1-20(2)12-9-13-21(3)14-10-15-22(4)16-11-18-29(8)19-17-26-25(7)27(30)23(5)24(6)28(26)31-29/h20-22,30H,9-19H2,1-8H3/t21-,22-,29-/m1/s1
(2R,4'R,8'R)-alpha-tocopherol
(+)-alpha-tocopherol
InChIKey=GVJHHUAWPYXKBD-IEOSBIPEBS
C29H50O2
http://www.ebi.ac.uk/efo/EFO_0001465
d-alpha-tocopherol
brainstem[accessedResource: MAT:0000111][accessDate: 04-11-2010]
MAT:0000111
myelencephalon[accessedResource: NIFSTD:birnlex_957][accessDate: 04-11-2010]
EHDAA:7588
medulla
Metepencephalon[accessedResource: FMAID:62004][accessDate: 04-11-2010]
Brain structure that is located ventrocaudal to the cerebellum and just anterior to the spinal cord and contains the sensory and motor nuclei of six cranial nerves. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished here.[accessedResource: ZFA:0000545][accessDate: 04-11-2010]
BTO:0000041
EMAPA:17550
TAO:0000545
Bulb
SAEL:13
ZFA:0000545
medulla[accessedResource: NIFSTD:birnlex_957][accessDate: 04-11-2010]
MA:0000206
medulla oblongata
James Malone
FMAID:62004
Bulb[accessedResource: FMAID:62004][accessDate: 04-11-2010]
EV:0100275
The part of the vertebrate brain that is continuous posteriorly with the spinal cord and that contains the centers controlling involuntary vital functions.
Brain structure that is located ventrocaudal to the cerebellum and just anterior to the spinal cord and contains the sensory and motor nuclei of six cranial nerves. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished here.
Metepencephalon
medulla oblonmgata
SAEL:65
NIFSTD:birnlex_957
myelencephalon
The part of the vertebrate brain that is continuous posteriorly with the spinal cord and that contains the centers controlling involuntary vital functions.[accessedResource: BTO:0000041][accessDate: 04-11-2010]
Organ component of neuraxis that has as its parts the medullary reticular formation, inferior olivary complex and cochlear nuclear complex, among other structures. Examples: There is only one medulla oblongata.
medulla oblonmgata[accessedResource: MAT:0000111][accessDate: 04-11-2010]
Tomasz Adamusiak
brainstem
James Malone
CS57823 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158847&type=germplasm
CS57823
http://www.arabidopsis.org/servlets/TairObject?id=1005158847&type=germplasm
CHEBI:39116
James Malone
http://www.ebi.ac.uk/efo/EFO_0001873
pyrethroid ester insecticide
pyrethroid ester insecticides
Viral hepatitis C (disorder)
Viral hepatitis C[accessedResource: DOID:1883][accessDate: 04-11-2010]
NANBH[accessedResource: DOID:1883][accessDate: 04-11-2010]
chronic hepatitis C[accessedResource: DOID:1883][accessDate: 04-11-2010]
Hepatitis C (disorder)[accessedResource: DOID:1883][accessDate: 04-11-2010]
chronic hepatitis C with hepatic coma
chronic type C viral hepatitis[accessedResource: DOID:1883][accessDate: 04-11-2010]
A Hepacivirus infectious disease which is a chronic bloodborne infectious disease caused by Hepatitis C virus. The symptoms include fever, fatigue, loss of appetite, nausea, vomiting, abdominal pain, clay-colored bowel movements, joint pain and jaundice.
Hepatitis C (disorder)
acute hepatitis C with hepatic coma[accessedResource: DOID:1883][accessDate: 04-11-2010]
Hepatitis non-A non-B (disorder)[accessedResource: DOID:1883][accessDate: 04-11-2010]
chronic viral hepatitis C
hepatitis C
Hepatitis non-A non-B (disorder)
chronic hepatitis C with hepatic coma[accessedResource: DOID:1883][accessDate: 04-11-2010]
chronic viral hepatitis C[accessedResource: DOID:1883][accessDate: 04-11-2010]
Viral hepatitis C
Viral hepatitis C (disorder)[accessedResource: DOID:1883][accessDate: 04-11-2010]
acute hepatitis C with hepatic coma
DOID:1883
chronic type C viral hepatitis
chronic hepatitis C
NANBH
hepatitis nonA nonB[accessedResource: DOID:1883][accessDate: 04-11-2010]
A Hepacivirus infectious disease which is a chronic bloodborne infectious disease caused by Hepatitis C virus. The symptoms include fever, fatigue, loss of appetite, nausea, vomiting, abdominal pain, clay-colored bowel movements, joint pain and jaundice.[accessedResource: DOID:1883][accessDate: 04-11-2010]
Tomasz Adamusiak
hepatitis nonA nonB
circular visceral muscle fiber[accessedResource: FBbt:00005072][accessDate: 04-11-2010]
James Malone
circular visceral muscle fibers
FBbt:00005072
circular visceral muscle fiber
trichloroethylene
1,1,2-trichloroethene
1382
21382
79-01-6
C2HCl3
James Malone
CS57583 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158607&type=germplasm
CS57583
http://www.arabidopsis.org/servlets/TairObject?id=1005158607&type=germplasm
Hatching:Long-pec[accessedResource: ZFS:0000033][accessDate: 04-11-2010]
James Malone
hatching stage
ZFS:0000033
Hatching:Long-pec
Ele Holloway
James Malone
PLB985
N-(3-chloro-4-fluorophenyl)-7-methoxy-6-(3-(4-morpholinyl)propoxy)-4-quinazolinamine
InChI=1/C22H24ClFN4O3/c1-29-20-13-19-16(12-21(20)31-8-2-5-28-6-9-30-10-7-28)22(26-14-25-19)27-15-3-4-18(24)17(23)11-15/h3-4,11-14H,2,5-10H2,1H3,(H,25,26,27)/f/h27H
James Malone
gefitinib
ZD 1839
http://www.ebi.ac.uk/efo/EFO_0001541
Iressa
InChIKey=XGALLCVXEZPNRQ-LELJVTLKCM
C22H24ClFN4O3
CHEBI:49668
4-(3'-chloro-4'-fluoroanilino)-7-methoxy-6-(3-morpholinopropoxy)quinazoline
N-(3-chloro-4-fluorophenyl)-7-methoxy-6-(3-morpholin-4-ylpropoxy)quinazolin-4-amine
A quinazoline that has formula C22H24ClFN4O3.
COc1cc2ncnc(Nc3ccc(F)c(Cl)c3)c2cc1OCCCN1CCOCC1
Tomasz Adamusiak
terminal nerve
ZFA:0001356
James Malone
GM11832
James Malone
GM11830
myocardial hypertrophy
Ele Holloway
an increase in size of the cardiac tissue, not due to increased cell number[accessedResource: MP:0001625][accessDate: 04-11-2010]
James Malone
cardiac hypertrophy
an increase in size of the cardiac tissue, not due to increased cell number
MP:0001625
James Malone
CL:0000202
auditory hair cell[accessedResource: CL:0000202][accessDate: 04-11-2010]
auditory hair cell
A mechanoreceptor cell located in the inner ear that is sensitive to auditory stimuli. The accessory sensory structures are arranged so that appropriate stimuli cause movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system.[accessedResource: CL:0000202][accessDate: 04-11-2010]
Tomasz Adamusiak
NIFSTD:sao630986029
auditory receptor cell
A mechanoreceptor cell located in the inner ear that is sensitive to auditory stimuli. The accessory sensory structures are arranged so that appropriate stimuli cause movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system.
auditory receptor cell[accessedResource: CL:0000202][accessDate: 04-11-2010]
cochlear hair cell
A mechanoreceptor cell located in the organ of Corti that is sensitive to auditory stimuli and in the vestibular apparatus that is sensitive to movement of the head. In each case the accessory sensory structures are arranged so that appropriate stimuli cause movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system.
anticholesteremic agent
A substance used to lower plasma cholesterol levels.
CHEBI:35821
http://www.ebi.ac.uk/efo/EFO_0001856
anticholesteremic drug
James Malone
cholesterol inhibitor
anticholesteremic
hypocholesteremic agent
anticholesteremic drugs
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#disease_state_design[accessedResource: MO_902][accessDate: 04-11-2010]
Tomasz Adamusiak
disease state design
MO_902
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#disease_state_design
1,10-phenanthroline
o-Phenanthroline
A phenanthroline that has formula C12H8N2.
CHEBI:44975
InChIKey=DGEZNRSVGBDHLK-UHFFFAOYAW
C12H8N2
orthophenanthroline
http://www.ebi.ac.uk/efo/EFO_0002483
InChI=1/C12H8N2/c1-3-9-5-6-10-4-2-8-14-12(10)11(9)13-7-1/h1-8H
c1cnc2c(c1)ccc1cccnc21
4,5-diazaphenanthrene
Ele Holloway
James Malone
phen
quetiapine
111974-69-7
2-{[2-(4-dibenzo[b,f][1,4]thiazepin-11-ylpiperazin-1-yl)ethyl]oxy}ethanol
23546
3546
C21H25N3O2S
InChI=1/C10H8N2/c1-3-7-11-9(5-1)10-6-2-4-8-12-10/h1-8H
2,2'-dipyridyl
A bipyridine that has formula C10H8N2.
2,2'-Bipyridin
InChIKey=ROFVEXUMMXZLPA-UHFFFAOYAP
Tomasz Adamusiak
alpha,alpha'-dipyridine
2,2'-bipyridine
C10H8N2
http://www.ebi.ac.uk/efo/EFO_0002723
bpy
c1ccc(nc1)-c1ccccn1
Ele Holloway
CHEBI:30351
2,2'-bipyridyl
2,2'-dipyridine
alpha,alpha'-bipyridyl
alpha,alpha'-bipyridine
alpha,alpha'-dipyridyl
2-(2-pyridyl)pyridine
20-hydroxyecdysone
(2beta,3beta,5beta,22R)-2,3,14,20,22,25-hexahydroxycholest-7-en-6-one
20388
40388
5289-74-7
C27H44O7
ecdysterone; 20E
8-bromo-cyclic AMP
DSSTox_Generic_SID:C10H11BrN5O6P
CASRN:23583-48-4
James Malone
Tomasz Adamusiak
DSSTox_CID:40403
Ele Holloway
STRUCTURE_Formula:(4aR,6R,7R,7aS)-6-(6-amino-8-bromo-9H-purin-9-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol 2-oxide
8-Br-cAMP
James Malone
CC531
Tomasz Adamusiak
visual anlage
FBbt:00005434
phenotype is synonymous with quality
true
obsolete_phenotypic factor
James Malone
An assay in which one or more metabolites are analysed.
metabolomic profiling
ArrayExpress production team
metabolimic profiling
tolbutamide
N-Butyl-N'-(4-methylphenylsulfonyl)urea
N-Butyl-N'-(p-tolylsulfonyl)urea
1-Butyl-3-(p-methylphenylsulfonyl)urea
http://www.ebi.ac.uk/efo/EFO_0001626
1-Butyl-3-(p-tolylsulfonyl)urea
CCCCNC(=O)NS(=O)(=O)c1ccc(C)cc1
N-[(butylamino)carbonyl]-4-methylbenzenesulfonamide
N-(4-Methylphenylsulfonyl)-N'-butylurea
InChIKey=JLRGJRBPOGGCBT-KGCNKATMCC
Orinase (TN)
InChI=1/C12H18N2O3S/c1-3-4-9-13-12(15)14-18(16,17)11-7-5-10(2)6-8-11/h5-8H,3-4,9H2,1-2H3,(H2,13,14,15)/f/h13-14H
CHEBI:27999
An urea that has formula C12H18N2O3S.
N-n-Butyl-N'-tosylurea
1-Butyl-3-tosylurea
C12H18N2O3S
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#individual_genetic_characteristics_design[accessedResource: MO_527][accessDate: 04-11-2010]
Tomasz Adamusiak
genotype design
MO_527
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#individual_genetic_characteristics_design
James Malone
An instrument design which describes the design of the array.
array design
BTO:0000613
GRO:0005342[accessedResource: BTO:0000613][accessDate: 04-11-2010]
PO:0020100
GRO:0005342
The part of the axis of a plant embryo or seedling below the cotyledon.
James Malone
hypocotyl
The part of the axis of a plant embryo or seedling below the cotyledon.[accessedResource: BTO:0000613][accessDate: 04-11-2010]
Ele Holloway
James Malone
Tomasz Adamusiak
alpha-methyl-L-p-tyrosine
CASRN:672-87-7
James Malone
HMEC184
The total sum of the genetic information of an organism that is known and relevant to the experiment being performed, including chromosomal, plasmid, viral or other genetic material which has been introduced into the organism either prior to or during the experiment.
Information, making the distinction between the actual physical material (e.g. a cell) and the information about the genetic content (genotype).
Jie Zheng
Tomasz Adamusiak
NIFSTD:birnlex_2023
genotype
James Malone
MO_51
Jie Zheng
Tomasz Adamusiak
renal branch of vagus nerve
FMAID:6670
MAT:0000152
sensillum chaeticum[accessedResource: FBbt:00005177][accessDate: 04-11-2010]
James Malone
FBbt:00005177
chaeta
A sensillum with a long, unicellular, setiform outgrowth that is strongly chitinized.
sensillum chaeticum
A sensillum with a long, unicellular, setiform outgrowth that is strongly chitinized.[accessedResource: FBbt:00005177][accessDate: 04-11-2010]
sensory bristle
chaeta[accessedResource: FBbt:00005177][accessDate: 04-11-2010]
Tomasz Adamusiak
macula utricle
ZFA:0000030
James Malone
GM12004
trimethyltin
Ele Holloway
DSSTox_CID:15102
Tomasz Adamusiak
STRUCTURE_Formula:C3H10Sn
James Malone
STRUCTURE_ChemicalName_IUPAC:trimethylstannane
CASRN:1631-73-8
TMT
DSSTox_Generic_SID:35102
Tomasz Adamusiak
CHRONIC POST TRAUMATIC STRESS DIS
POSTTRAUMATIC STRESS DISORDERS
DOID:2055
traumatic neurosis
Delayed Onset Post-Traumatic Stress Disorder[accessedResource: MSH:D013313][accessDate: 04-11-2010]
Posttraumatic stress disorder, NOS
POSTTRAUMATIC STRESS DIS[accessedResource: ICD9:309.81][accessDate: 04-11-2010]
NIFSTD:birnlex_12679
Post-traumatic stress syndrome
Acute Post-Traumatic Stress Disorder
Acute Post Traumatic Stress Disorder[accessedResource: MSH:D013313][accessDate: 04-11-2010]
POST TRAUMATIC STRESS DIS
Posttraumatic stress disorder[accessedResource: ICD9:309.81][accessDate: 04-11-2010]
Post Traumatic Stress Disorders
Posttraumatic stress disorder NOS[accessedResource: DOID:2055][accessDate: 04-11-2010]
MSH:D013313
A class of traumatic stress disorders with symptoms that last more than one month. There are various forms of post-traumatic stress disorder, depending on the time of onset and the duration of these stress symptoms. In the acute form, the duration of the symptoms is between 1 to 3 months. In the chronic form, symptoms last more than 3 months. With delayed onset, symptoms develop more than 6 months after the traumatic event (MeSH).
PTSD
A class of traumatic stress disorders with symptoms that last more than one month. There are various forms of post-traumatic stress disorder, depending on the time of onset and the duration of these stress symptoms. In the acute form, the duration of the symptoms is between 1 to 3 months. In the chronic form, symptoms last more than 3 months. With delayed onset, symptoms develop more than 6 months after the traumatic event (MeSH).[accessedResource: NIFSTD:birnlex_12679][accessDate: 04-11-2010]
James Malone
SNOMEDCT:47505003
POSTTRAUMATIC STRESS DISORDERS[accessedResource: MSH:D013313][accessDate: 04-11-2010]
Post-Traumatic Neurosis[accessedResource: NIFSTD:birnlex_12679][accessDate: 04-11-2010]
Posttraumatic stress disorder (disorder)
PTSD - Post-traumatic stress disorder
post-traumatic stress disorder
Neuroses, Post Traumatic[accessedResource: MSH:D013313][accessDate: 04-11-2010]
POSTTRAUMATIC STRESS DIS
ICD9:309.81
STRESS DIS POST TRAUMATIC[accessedResource: MSH:D013313][accessDate: 04-11-2010]
Traumatic neurosis[accessedResource: SNOMEDCT:47505003][accessDate: 04-11-2010]
A class of traumatic stress disorders with symptoms that last more than one month. There are various forms of post-traumatic stress disorder, depending on the time of onset and the duration of these stress symptoms. In the acute form, the duration of the symptoms is between 1 to 3 months. In the chronic form, symptoms last more than 3 months. With delayed onset, symptoms develop more than 6 months after the traumatic event.[accessedResource: MSH:D013313][accessDate: 04-11-2010]
GeneRIF:12232785
DELAYED ONSET POST TRAUMATIC STRESS DIS[accessedResource: MSH:D013313][accessDate: 04-11-2010]
Post-Traumatic Neurosis
PTSD - Post-traumatic stress disorder[accessedResource: SNOMEDCT:47505003][accessDate: 04-11-2010]
DELAYED ONSET POST TRAUMATIC STRESS DIS
Delayed Onset Post Traumatic Stress Disorder
Chronic Post-Traumatic Stress Disorder
Neuroses, Post Traumatic
A class of traumatic stress disorders with symptoms that last more than one month. There are various forms of post-traumatic stress disorder, depending on the time of onset and the duration of these stress symptoms. In the acute form, the duration of the symptoms is between 1 to 3 months. In the chronic form, symptoms last more than 3 months. With delayed onset, symptoms develop more than 6 months after the traumatic event.
ACUTE POST TRAUMATIC STRESS DIS[accessedResource: MSH:D013313][accessDate: 04-11-2010]
Post-traumatic stress syndrome[accessedResource: SNOMEDCT:47505003][accessDate: 04-11-2010]
Stress Disorder, Posttraumatic
ACUTE POST TRAUMATIC STRESS DIS
Stress Disorders, Post Traumatic[accessedResource: MSH:D013313][accessDate: 04-11-2010]
Posttraumatic stress disorder (disorder)[accessedResource: SNOMEDCT:47505003][accessDate: 04-11-2010]
NCIt:C3389
Chronic Post-Traumatic Stress Disorder[accessedResource: MSH:D013313][accessDate: 04-11-2010]
PTSD[accessedResource: MSH:D013313][accessDate: 04-11-2010]
CHRONIC POST TRAUMATIC STRESS DIS[accessedResource: MSH:D013313][accessDate: 04-11-2010]
celastrol
Ele Holloway
STRUCTURE_ChemicalName_IUPAC:(2R,4aS,6aS,12bR,14aS,14bR)-10-hydroxy-2,4a,6a,9,12b,14a-hexamethyl-11-oxo-1,2,3,4,4a,5,6,6a,11,12b,13,14,14a,14b-tetradecahydropicene-2-carboxylic acid
(9b,13a,14b,20a)-3-hydroxy-9,13-dimethyl-2-oxo-24,25,26 -trinoroleana-1(10),3,5,7-tertraen-29-oic acid
CASRN:34157-83-0
DSSTox_Generic_SID:40993
STRUCTURE_Formula:C29H38O4
DSSTox_CID:20993
James Malone
Tomasz Adamusiak
Any one of the three (Common, Deep, and Superficial) peroneal nerves.[accessedResource: NCIt:C52814][accessDate: 04-11-2010]
Tomasz Adamusiak
Any one of the three (Common, Deep, and Superficial) peroneal nerves.
peroneal nerve
NCIt:C52814
Portion of tissue which is connective tissue composed of collagen and/or elastin fibers and chondrocytes. Cartilage is avascular and provides both skeletal functions and a framework upon which bone is deposited.[accessedResource: TAO:0001501][accessDate: 04-11-2010]
MA:0000104
A specialized, fibrous connective tissue, forming most of the temporary skeleton of the embryo, providing a model in which most of the bones develop, and constituting an important part of the growth mechanism of the organism. It exists in several types, the most important of which are hyaline cartilage, elastic cartilage, and fibrocartilage. Also used as a general term to designate a mass of such tissue in a particular site in the body.[accessedResource: BTO:0000206][accessDate: 04-11-2010]
SAEL:17
EV:0100141
BTO:0000206
cartilage
MAT:0000189
XAO:0000170
Portion of tissue which is connective tissue composed of collagen and/or elastin fibers and chondrocytes. Cartilage is avascular and provides both skeletal functions and a framework upon which bone is deposited.
James Malone
A specialized, fibrous connective tissue, forming most of the temporary skeleton of the embryo, providing a model in which most of the bones develop, and constituting an important part of the growth mechanism of the organism. It exists in several types, the most important of which are hyaline cartilage, elastic cartilage, and fibrocartilage. Also used as a general term to designate a mass of such tissue in a particular site in the body.
TAO:0001501
NCI Metathesaurus http://ncimeta.nci.nih.gov/MetaServlet/ResultServlet?cui=C0039082 Date accessed: 30th October 2007
doesnt' fit in the revised disease classification
James Malone
A set of symptoms or conditions that occur together and suggest the presence of a certain disease or an increased chance of developing the disease.
true
2.5
obsolete_syndrome
James Malone
CS57621 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158645&type=germplasm
CS57621
http://www.arabidopsis.org/servlets/TairObject?id=1005158645&type=germplasm
James Malone
GM12872
GeneRIF:15820830
Infertile (finding)
GeneRIF:15572448
GeneRIF:15474074
GeneRIF:12877256
GeneRIF:12816981
GeneRIF:12042278
Inability to reproduce after a specified period of unprotected intercourse. Reproductive sterility is permanent infertility.
DOID:5223
GeneRIF:11870081
Reproductive Sterility[accessedResource: MSH:D007246][accessDate: 04-11-2010]
GeneRIF:15340140
GeneRIF:12591952
GeneRIF:12072412
GeneRIF:14673081
GeneRIF:12801998
GeneRIF:15044606
GeneRIF:12692150
Infertile (finding)[accessedResource: DOID:5223][accessDate: 04-11-2010]
Infertile[accessedResource: DOID:5223][accessDate: 04-11-2010]
GeneRIF:12606444
GeneRIF:15811073
GeneRIF:15208629
GeneRIF:12811541
Sterility
GeneRIF:11868623
GeneRIF:14511213
MSH:D007246
GeneRIF:15546993
James Malone
Inability to reproduce after a specified period of unprotected intercourse. Reproductive sterility is permanent infertility.[accessedResource: MSH:D007246][accessDate: 04-11-2010]
GeneRIF:12960071
GeneRIF:15220464
GeneRIF:14667896
GeneRIF:15890676
Sterility[accessedResource: MSH:D007246][accessDate: 04-11-2010]
GeneRIF:12773415
GeneRIF:11352070
GeneRIF:15820792
GeneRIF:12479028
GeneRIF:12648179
GeneRIF:12297552
GeneRIF:12149515
GeneRIF:15166129
GeneRIF:15954500
infertility
GeneRIF:16169419
GeneRIF:16295654
GeneRIF:16048634
GeneRIF:11925379
GeneRIF:15820831
GeneRIF:12606378
Infertile
GeneRIF:15659488
GeneRIF:12086470
GeneRIF:14978268
GeneRIF:12818258
GeneRIF:12900510
GeneRIF:14687743
GeneRIF:15070774
GeneRIF:15139971
sterile
GeneRIF:15070965
GeneRIF:15749517
GeneRIF:15345679
GeneRIF:15569941
GeneRIF:12297480
GeneRIF:15019807
Reproductive Sterility
GeneRIF:15229204
Cupric sulfate
cupric sulfate anhydrous
copper(2+) sulfate
CuO4S
copper sulfate
CuSO4
http://www.ebi.ac.uk/efo/EFO_0001513
[Cu++].[O-]S([O-])(=O)=O
A metal sulfate compound having copper(2+) as the counterion.
InChIKey=ARUVKPQLZAKDPS-NJTCMIMLCU
CHEBI:23414
InChI=1/Cu.H2O4S/c;1-5(2,3)4/h;(H2,1,2,3,4)/q+2;/p-2/fCu.O4S/qm;-2
copper(II) sulfate
Jie Zheng
Tomasz Adamusiak
Theiler stage 21
birnlex_7076
[M]Glioblastoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:269506004][accessDate: 04-11-2010]
Glioblastoma NOS (morphologic abnormality)
Spongioblastoma Multiforme[accessedResource: NCIt:C3058][accessDate: 04-11-2010]
GeneRIF:16150119
GeneRIF:15041700
GeneRIF:16051596
Glioblastomas[accessedResource: MSH:D005909][accessDate: 04-11-2010]
GeneRIF:15339919
GeneRIF:14686729
GeneRIF:14555979
GeneRIF:11875718
Malignant Optic Nerve Astrocytoma[accessedResource: NIFSTD:birnlex_12621][accessDate: 04-11-2010]
GeneRIF:15198128
Glioblastomas
NIFSTD:birnlex_12620
Glioblastoma, no ICD-O subtype (morphologic abnormality)
Giant Cell Glioblastoma
GeneRIF:15332324
Tomasz Adamusiak
GeneRIF:15119015
[M]Glioblastoma NOS (morphologic abnormality)
GeneRIF:15967113
GeneRIF:12084347
GeneRIF:15122332
The most malignant astrocytic tumor (WHO grade IV). It is composed of poorly differentiated neoplastic astrocytes and it is characterized by the presence of cellular polymorphism, nuclear atypia, brisk mitotic activity, vascular thrombosis, microvascular proliferation and necrosis. It typically affects adults and is preferentially located in the cerebral hemispheres. It may develop from diffuse astrocytoma WHO grade II or anaplastic astrocytoma (secondary glioblastoma), but more frequently, it manifests after a short clinical history de novo, without evidence of a less malignant precursor lesion (primary glioblastoma). Two histologic variants are recognized: giant cell glioblastoma and gliosarcoma. (WHO)
GeneRIF:15332332
Glioblastoma (morphologic abnormality)
GeneRIF:11959893
GeneRIF:15719270
Glioblastoma, no ICD-O subtype
GeneRIF:11856869
Glioblastoma
Glial cell derived tumors arising from the optic nerve, usually presenting in childhood. Roughly 50% are associated with NEUROFIBROMATOSIS 1. Clinical manifestations include decreased visual acuity; EXOPHTHALMOS; NYSTAGMUS, PATHOLOGIC; STRABISMUS; pallor or swelling of the optic disc; and INTRACRANIAL HYPERTENSION. The tumor may extend into the optic chiasm and hypothalamus (MeSH).
GeneRIF:12133571
GeneRIF:14654927
GeneRIF:11953893
GeneRIF:16264179
Astrocytomas, Grade IV
GeneRIF:15867231
GeneRIF:16215635
Glioblastoma, no ICD-O subtype[accessedResource: SNOMEDCT:63634009][accessDate: 04-11-2010]
Giant Cell Glioblastoma[accessedResource: MSH:D005909][accessDate: 04-11-2010]
The most malignant astrocytic tumor (WHO grade IV). It is composed of poorly differentiated neoplastic astrocytes and it is characterized by the presence of cellular polymorphism, nuclear atypia, brisk mitotic activity, vascular thrombosis, microvascular proliferation and necrosis. It typically affects adults and is preferentially located in the cerebral hemispheres. It may develop from diffuse astrocytoma WHO grade II or anaplastic astrocytoma (secondary glioblastoma), but more frequently, it manifests after a short clinical history de novo, without evidence of a less malignant precursor lesion (primary glioblastoma). Two histologic variants are recognized: giant cell glioblastoma and gliosarcoma. (WHO)[accessedResource: NCIt:C3058][accessDate: 04-11-2010]
GeneRIF:16251422
GeneRIF:12543796
Grade IV Astrocytoma
Astrocytoma, Grade IV[accessedResource: MSH:D005909][accessDate: 04-11-2010]
Spongioblastoma Multiforme
Malignant Optic Nerve Astrocytoma
glioblastoma multiforme
Optic Glioma
GeneRIF:12082608
GeneRIF:14712484
Giant Cell Glioblastomas[accessedResource: MSH:D005909][accessDate: 04-11-2010]
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures.
GeneRIF:12445161
GeneRIF:15094455
GeneRIF:12507886
GeneRIF:15696971
GeneRIF:16051185
GeneRIF:12845671
GBM (Glioblastoma)[accessedResource: DOID:3068][accessDate: 04-11-2010]
Optic Glioma[accessedResource: NIFSTD:birnlex_12621][accessDate: 04-11-2010]
GeneRIF:15986444
NIFSTD:birnlex_12621
[M]Glioblastoma NOS
GeneRIF:15029197
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures.[accessedResource: MSH:D005909][accessDate: 04-11-2010]
Glial cell derived tumors arising from the optic nerve, usually presenting in childhood. Roughly 50% are associated with NEUROFIBROMATOSIS 1. Clinical manifestations include decreased visual acuity; EXOPHTHALMOS; NYSTAGMUS, PATHOLOGIC; STRABISMUS; pallor or swelling of the optic disc; and INTRACRANIAL HYPERTENSION. The tumor may extend into the optic chiasm and hypothalamus (MeSH).[accessedResource: NIFSTD:birnlex_12621][accessDate: 04-11-2010]
GeneRIF:15605984
Giant Cell Glioblastomas
GBM - Glioblastoma multiforme[accessedResource: SNOMEDCT:63634009][accessDate: 04-11-2010]
GeneRIF:11741977
GeneRIF:15893739
James Malone
GeneRIF:12839970
Glioblastoma, NOS[accessedResource: SNOMEDCT:63634009][accessDate: 04-11-2010]
Glioblastoma NOS (morphologic abnormality)[accessedResource: DOID:3068][accessDate: 04-11-2010]
GeneRIF:11980654
GeneRIF:11809760
GeneRIF:16003758
GeneRIF:12169389
Glioblastoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:63634009][accessDate: 04-11-2010]
GeneRIF:12850541
GeneRIF:14676120
GeneRIF:11916499
GeneRIF:15967096
GeneRIF:15153340
Grade IV Astrocytic Neoplasm[accessedResource: NCIt:C3058][accessDate: 04-11-2010]
GeneRIF:12517803
GeneRIF:11593297
GeneRIF:15618223
Glioblastoma, NOS
GeneRIF:14701753
Optic Nerve Glioma[accessedResource: NIFSTD:birnlex_12621][accessDate: 04-11-2010]
GeneRIF:12407114
GeneRIF:14753494
GeneRIF:12073047
GeneRIF:12414663
GeneRIF:15827123
Astrocytomas, Grade IV[accessedResource: MSH:D005909][accessDate: 04-11-2010]
Optic Nerve Glioma
DOID:3068
GeneRIF:14730346
GeneRIF:12704666
GeneRIF:15509542
GeneRIF:15493013
GeneRIF:14692702
glioblastoma[accessedResource: DOID:3068][accessDate: 04-11-2010]
NCIt:C3058
GeneRIF:12918061
GeneRIF:16078115
GeneRIF:12783249
GBM - Glioblastoma multiforme
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures (MeSH).[accessedResource: NIFSTD:birnlex_12620][accessDate: 04-11-2010]
A malignant form of astrocytoma histologically characterized by pleomorphism of cells, nuclear atypia, microhemorrhage, and necrosis. They may arise in any region of the central nervous system, with a predilection for the cerebral hemispheres, basal ganglia, and commissural pathways. Clinical presentation most frequently occurs in the fifth or sixth decade of life with focal neurologic signs or seizures (MeSH).
GeneRIF:14519668
SNOMEDCT:63634009
GeneRIF:12483523
GBM (Glioblastoma)
GeneRIF:12125737
Grade IV Astrocytic Tumor
GLM - Glioblastoma multiforme
GeneRIF:15906353
Grade IV Astrocytic Tumor[accessedResource: NCIt:C3058][accessDate: 04-11-2010]
GeneRIF:15561105
GeneRIF:15928303
GeneRIF:15627206
GLM - Glioblastoma multiforme[accessedResource: SNOMEDCT:63634009][accessDate: 04-11-2010]
GeneRIF:15364411
GeneRIF:15908427
[M]Glioblastoma NOS[accessedResource: SNOMEDCT:269506004][accessDate: 04-11-2010]
Grade IV Astrocytic Neoplasm
Glioblastoma (morphologic abnormality)[accessedResource: DOID:3068][accessDate: 04-11-2010]
SNOMEDCT:269506004
GeneRIF:15975137
GeneRIF:15557280
GeneRIF:16171786
MSH:D005909
James Malone
HCC4006
MMHCC
true
Mouse Models of Human Cancer Consortium
MMHCC[accessedResource: NCIt:C19750][accessDate: 10-05-2010]
An MMHCC (Mouse Models of Human Cancers Consortium) part is an organism part that has been modelled by the MMHCC, a program to develop and refine experimental models that reflect the etiology and progression of human cancer.
obsolete_MMHCC part
NCIt:C19750
A program to develop and refine experimental models that reflect the etiology and progression of human cancer.[accessedResource: NCIt:C19750][accessDate: 10-05-2010]
Mouse Models of Human Cancer Consortium[accessedResource: NCIt:C19750][accessDate: 10-05-2010]
Obsolete: No longer required in EFO
James Malone
A program to develop and refine experimental models that reflect the etiology and progression of human cancer.
CHEBI:44423
NC(=O)NO
carbamohydroximic acid
CH4N2O2
oxyurea
hydroxycarbamide
N-carbamoylhydroxylamine
N-hydroxyurea
carbamyl hydroxamate
carbamohydroxamic acid
http://www.ebi.ac.uk/efo/EFO_0001554
InChIKey=VSNHCAURESNICA-DTXNPOPMCG
Hydroxycarbamid
An urea that has formula CH4N2O2.
hydrea
InChI=1/CH4N2O2/c2-1(4)3-5/h5H,(H3,2,3,4)/f/h3H,2H2
Hydroxyharnstoff
carbamoyl oxime
hydroxyurea
GeneRIF:15149158
GeneRIF:14638862
GeneRIF:15935701
GeneRIF:12581744
GeneRIF:15550849
GeneRIF:12653579
GeneRIF:11759817
GeneRIF:12105188
carcinoma of breast (disorder)
GeneRIF:12115372
Carcinoma of the Breast[accessedResource: NCIt:C4872][accessDate: 04-11-2010]
GeneRIF:11992405
GeneRIF:16000313
GeneRIF:15671541
GeneRIF:12133473
GeneRIF:12462387
GeneRIF:12499259
GeneRIF:15742334
BREAST CANCER[accessedResource: NCIt:C4872][accessDate: 04-11-2010]
GeneRIF:16054892
NCIt:C4872
GeneRIF:15034868
GeneRIF:11909957
GeneRIF:15837735
Carcinoma of breast NOS[accessedResource: SNOMEDCT:286898006][accessDate: 04-11-2010]
GeneRIF:11822878
GeneRIF:15102687
GeneRIF:15059886
GeneRIF:15867228
GeneRIF:15492258
Cancer of Breast
CANCER, BREAST
GeneRIF:15856430
GeneRIF:12529969
GeneRIF:12197229
GeneRIF:14871985
GeneRIF:14584041
GeneRIF:15102684
GeneRIF:12640109
GeneRIF:12878859
GeneRIF:12648519
GeneRIF:14612940
GeneRIF:14666627
CA - Carcinoma of breast[accessedResource: SNOMEDCT:254838004][accessDate: 04-11-2010]
GeneRIF:11839578
SNOMEDCT:254838004
GeneRIF:12784332
Carcinoma of breast NOS (disorder)[accessedResource: SNOMEDCT:286898006][accessDate: 04-11-2010]
GeneRIF:12490973
GeneRIF:15374639
GeneRIF:15067342
Mammary Carcinoma[accessedResource: NCIt:C4872][accessDate: 04-11-2010]
breast carcinoma
GeneRIF:15882617
GeneRIF:16024059
GeneRIF:14966279
A carcinoma arising from the breast, most commonly the terminal ductal-lobular unit. It is the most common malignant tumor in females. Risk factors include country of birth, family history, menstrual and reproductive history, fibrocystic disease and epithelial hyperplasia, exogenous estrogens, contraceptive agents, and ionizing radiation. The vast majority of breast carcinomas are adenocarcinomas (ductal or lobular). Breast carcinoma spreads by direct invasion, by the lymphatic route, and by the blood vessel route. The most common site of lymph node involvement is the axilla.[accessedResource: NCIt:C4872][accessDate: 04-11-2010]
GeneRIF:16144914
GeneRIF:15920544
GeneRIF:14519635
carcinoma OF breast
GeneRIF:15578430
GeneRIF:11859072
GeneRIF:14729059
GeneRIF:12552965
GeneRIF:11962738
GeneRIF:12015771
GeneRIF:15073116
GeneRIF:16027728
GeneRIF:12879463
GeneRIF:15944917
GeneRIF:14687724
GeneRIF:14654792
GeneRIF:11986781
GeneRIF:11724803
CA - Carcinoma of breast
GeneRIF:15241820
GeneRIF:15034014
GeneRIF:12496062
A carcinoma that originates from breast tissue.
GeneRIF:15451571
GeneRIF:15168344
Carcinoma of the Breast
James Malone
GeneRIF:14692019
GeneRIF:12034875
GeneRIF:15743035
GeneRIF:11802810
Cancer of the Breast
Carcinoma of breast NOS (disorder)
GeneRIF:11994274
A carcinoma arising from the breast, most commonly the terminal ductal-lobular unit. It is the most common malignant tumor in females. Risk factors include country of birth, family history, menstrual and reproductive history, fibrocystic disease and epithelial hyperplasia, exogenous estrogens, contraceptive agents, and ionizing radiation. The vast majority of breast carcinomas are adenocarcinomas (ductal or lobular). Breast carcinoma spreads by direct invasion, by the lymphatic route, and by the blood vessel route. The most common site of lymph node involvement is the axilla.
GeneRIF:16273187
GeneRIF:12650602
GeneRIF:16049961
GeneRIF:16295419
GeneRIF:15592496
GeneRIF:15353581
GeneRIF:15856473
SNOMEDCT:286898006
GeneRIF:12522268
GeneRIF:10713110
GeneRIF:15193258
GeneRIF:15241822
Mammary carcinoma
GeneRIF:16007173
A carcinoma that derives_from breast tissue.[accessedResource: DOID:3459][accessDate: 04-11-2010]
GeneRIF:15059510
GeneRIF:12592371
Carcinoma of Breast[accessedResource: NCIt:C4872][accessDate: 04-11-2010]
Cancer of the Breast[accessedResource: NCIt:C4872][accessDate: 04-11-2010]
GeneRIF:15693887
GeneRIF:12231533
GeneRIF:14991534
GeneRIF:12037665
GeneRIF:15156151
GeneRIF:12538354
GeneRIF:12566312
GeneRIF:12452027
Cancer of Breast[accessedResource: NCIt:C4872][accessDate: 04-11-2010]
GeneRIF:11948115
Carcinoma of breast NOS
GeneRIF:12637343
A carcinoma that derives_from breast tissue.
GeneRIF:14500350
GeneRIF:12174926
GeneRIF:11891846
carcinoma of breast (disorder)[accessedResource: DOID:3459][accessDate: 04-11-2010]
GeneRIF:15999367
DOID:3459
GeneRIF:15863392
James Malone
http://www.ebi.ac.uk/efo/EFO_0001684
true
A base unit which is a standard measure of the wavelength-weighted power emitted by a light source in a particular direction.
A luminous intensity unit is a base unit which is a standard measure of the wavelength-weighted power emitted by a light source in a particular direction.
luminous intensity unit
UO:0000007
Ele Holloway
James Malone
Tomasz Adamusiak
carvacrol
CASRN: 499-75-2
cymophenol
Any of the light horny epidermal outgrowths that form the external covering of the body of birds and that consist of a shaft bearing on each side a series of barbs which bear barbules which in turn bear barbicels commonly ending in hooked hamuli and interlocking with the barbules of an adjacent barb to link the barbs into a continuous vane.[accessedResource: BTO:0000447][accessDate: 04-11-2010]
James Malone
Any of the light horny epidermal outgrowths that form the external covering of the body of birds and that consist of a shaft bearing on each side a series of barbs which bear barbules which in turn bear barbicels commonly ending in hooked hamuli and interlocking with the barbules of an adjacent barb to link the barbs into a continuous vane.
feather
BTO:0000447
MAT:0000156
cefuroxime
55268-75-2
diclofenac
15307-86-5
James Malone
An experimental factor in Array Express.
Helen Parkinson
An experimental factor in Array Express which are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner.
Helen Parkinson
true
MO_10
Jie Zheng
Concept naming convention is lower case natural naming with spaces, when necessary captials should be used, for example disease factor, HIV, breast carcinoma, Ewing's sarcoma
Tomasz Adamusiak
Tomasz Adamusiak
James Malone
experimental factor
plant ovary
BTO:0000750
The enlarged rounded usually basal portion of the pistil or gynoecium of an angiospermous plant that bears the ovules and consists of one or more carpels
MAT:0000517
James Malone
The enlarged rounded usually basal portion of the pistil or gynoecium of an angiospermous plant that bears the ovules and consists of one or more carpels[accessedResource: BTO:0000750][accessDate: 04-11-2010]
PO:0009072
James Malone
true
2.5
duplicate of EFO_0000182
obsolete_liver carcinoma
carbon dioxide
124-38-9
27028
7028
CO2
dioxomethane
CO2
James Malone
true
Duplication, use EFO_0001089 instead
obsolete_Beas2B
potassium bromide
03/02/7758
Tomasz Adamusiak
hippocampus CA1
MA:0000950
birn_anat:birnlex_1197
James Malone
true
1.9
duplicate of EFO_0001220
obsolete_lymphoblastic leukemia MOLT-4
James Malone
drug role
James Malone
DOID:8791
ductal carcinoma in situ
carcinoma in situ of breast
exocrine cancer
Ele Holloway
Carcinoma of pancreas (disorder)
Exocrine pancreas carcinoma
exocrine cancer[accessedResource: DOID:4905][accessDate: 04-11-2010]
pancreatic carcinoma
A carcinoma that is manifested in cells found in the tissues of the pancreas.
Tomasz Adamusiak
carcinoma of pancreas (disorder)[accessedResource: DOID:4905][accessDate: 04-11-2010]
A carcinoma that is located_in cells found in the tissues of the pancreas.[accessedResource: DOID:4905][accessDate: 04-11-2010]
DOID:4905
carcinoma of pancreas[accessedResource: DOID:4905][accessDate: 04-11-2010]
Exocrine pancreas carcinoma[accessedResource: DOID:4905][accessDate: 04-11-2010]
A carcinoma that is located_in cells found in the tissues of the pancreas.
carcinoma of pancreas
asymmetric dimethylarginine
16758
36758
63937-30-4
C8H18N4O2
N5-[(dimethylamino)(imino)methyl]-L-ornithine
ADMA
Ele Holloway
James Malone
NCI-H2030
A treatment applied to a sample where some behaviour is expected as a result e.g. avoidance
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#behavioral_stimulus
behavioural stimulus
Jie Zheng
avoidance
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#behavioral_stimulus[accessedResource: MO_674][accessDate: 04-11-2010]
James Malone
Tomasz Adamusiak
MO_674
behavioral stimulus
James Malone
anterior spiracle specific anlage
FBbt:00005487
Multi-tissue structure which is the largest portion of diencephalon and is ventrally located. The hypothalamus arises near the end of the segmentation period and the embryonic hypothalamic region gives rise to the neurohypophysis and other diencephalic nuclei.[accessedResource: ZFA:0000032][accessDate: 04-11-2010]
FMAID:62008
Preoptico-hypothalamic area[accessedResource: FMAID:62008][accessDate: 04-11-2010]
NCIt:C22616
Preoptico-hypothalamic region[accessedResource: FMAID:62008][accessDate: 04-11-2010]
hypothalamus
EMAPA:17536
Preoptico-hypothalamic area
SAEL:52
TAO:0000032
Preoptico-hypothalamic region
CNS - Brain - Hypothalamus (MMHCC)
ZFA:0000032
MA:0000173
James Malone
CNS - Brain - Hypothalamus (MMHCC)[accessedResource: NCIt:C22616][accessDate: 04-11-2010]
A specialized brain region of the ventral diencephalon arising near the end of the segmentation period; the embryonic hypothalamic region will give rise to the posterior pituitary gland as well as a number of brain nuclei. Kimmel et al, 1995.
A specialized brain region of the ventral diencephalon arising near the end of the segmentation period; the embryonic hypothalamic region will give rise to the posterior pituitary gland as well as a number of brain nuclei. Kimmel et al, 1995.[accessedResource: TAO:0000032][accessDate: 04-11-2010]
MAT:0000112
A basal part of the diencephalon that lies beneath the thalamus on each side, forms the floor of the third ventricle, and includes vital autonomic regulatory centers.nThe ventral part of the diencephalon that forms the floor and part of the lateral wall of the third ventricle. Anatomically, it includes the preoptic area, optic tract, optic chiasm, mammillary bodies, tuber cinereum, infundibulum, and neurohypophysis, but for physiological purposes the neurohypophysis is considered a distinct structure. The hypothalamus may be divided into five regions or areas (area hypothalamica rostralis, area hypothalamica dorsalis, area hypothalamica intermedia, area hypothalamica lateralis and area hypothalamica posterior) or into three longitudinal zones (periventricular zone, medial zone, and lateral zone). The hypothalamic nuclei constitute that part of the corticodiencephalic mechanism that activates, controls and integrates the peripheral autonomic mechanisms, endocrine activity, and many somatic functions, e.g., a general regulation of water balance, body temperature, sleep, and food intake, and the development of secondary sex characteristics. The hypothalamus secretes vasopressin and oxytocin, which are stored in the pituitary, as well as many releasing factors (hypophysiotropic hormones), by means of which it exerts control over functions of the adenohypophysis.
Multi-tissue structure which is the largest portion of diencephalon and is ventrally located. The hypothalamus arises near the end of the segmentation period and the embryonic hypothalamic region gives rise to the neurohypophysis and other diencephalic nuclei.
Tomasz Adamusiak
EV:0100225
BTO:0000614
A basal part of the diencephalon that lies beneath the thalamus on each side, forms the floor of the third ventricle, and includes vital autonomic regulatory centers.nThe ventral part of the diencephalon that forms the floor and part of the lateral wall of the third ventricle. Anatomically, it includes the preoptic area, optic tract, optic chiasm, mammillary bodies, tuber cinereum, infundibulum, and neurohypophysis, but for physiological purposes the neurohypophysis is considered a distinct structure. The hypothalamus may be divided into five regions or areas (area hypothalamica rostralis, area hypothalamica dorsalis, area hypothalamica intermedia, area hypothalamica lateralis and area hypothalamica posterior) or into three longitudinal zones (periventricular zone, medial zone, and lateral zone). The hypothalamic nuclei constitute that part of the corticodiencephalic mechanism that activates, controls and integrates the peripheral autonomic mechanisms, endocrine activity, and many somatic functions, e.g., a general regulation of water balance, body temperature, sleep, and food intake, and the development of secondary sex characteristics. The hypothalamus secretes vasopressin and oxytocin, which are stored in the pituitary, as well as many releasing factors (hypophysiotropic hormones), by means of which it exerts control over functions of the adenohypophysis.[accessedResource: BTO:0000614][accessDate: 04-11-2010]
NIFSTD:birnlex_734
EHDAA:5446
James Malone
blastula 512-cell
ZFS:0000010
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#sampling_time_point[accessedResource: MO_866][accessDate: 04-11-2010]
James Malone
Jie Zheng
Tomasz Adamusiak
sampling time
MO_866
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#sampling_time_point
CASRN:101975-10-4
Ele Holloway
DSSTox_Generic_SID:42559
Tomasz Adamusiak
DSSTox_CID:22559
zardaverine
STRUCTURE_Formula:C12H10F2N2O3
James Malone
STRUCTURE_ChemicalName_IUPAC:6-[4-(difluoromethoxy)-3-methoxyphenyl]pyridazin-3(2H)-one
Tomasz Adamusiak
posterior lateral line
ZFA:0000944
Tomasz Adamusiak
ILSXISS13/TejJ
http://jaxmice.jax.org/strain/009260.html
true
Adipose Tissue - Brown (MMHCC)
Brown Fat
Brown Adipose Tissue
Brown Fat[accessedResource: NCIt:C22704][accessDate: 10-05-2010]
Brown Adipose Tissue[accessedResource: NCIt:C22704][accessDate: 10-05-2010]
obsolete_adipose tissue brown MMHCC
NCIt:C22704
bulbus arteriosus
Adipose Tissue - Brown (MMHCC)[accessedResource: NCIt:C22704][accessDate: 10-05-2010]
Use brown fat EFO_0000812 instead
Ele Holloway
James Malone
Tomasz Adamusiak
pleiotrophin
CASRN:134034-50-7
DSSTox_Generic_SID:40590
GeneRIF:15513955
GeneRIF:15287858
GeneRIF:14525948
PHT - Portal hypertension[accessedResource: SNOMEDCT:34742003][accessDate: 04-11-2010]
Abnormal increase of resistance to blood flow within the hepatic PORTAL SYSTEM, frequently seen in LIVER CIRRHOSIS and conditions with obstruction of the PORTAL VEIN.[accessedResource: MSH:D006975][accessDate: 04-11-2010]
Portal hypertension (disorder)[accessedResource: DOID:10762][accessDate: 04-11-2010]
Liver cirrhosis with intrahepatic portal obstruction, HYPERTENSION, and patent UMBILICAL VEINS.
GeneRIF:14990148
GeneRIF:15222038
MSH:D006975
DOID:10762
PHT - Portal hypertension
GeneRIF:14572769
GeneRIF:12730888
GeneRIF:15754412
GeneRIF:14699044
ICD9:572.3
GeneRIF:12713865
GeneRIF:15849554
Hypertensions, Portal
GeneRIF:15513950
Portal hypertension (disorder)
Cruveilhier-Baumgarten Syndrome[accessedResource: MSH:D006975][accessDate: 04-11-2010]
Liver cirrhosis with intrahepatic portal obstruction, HYPERTENSION, and patent UMBILICAL VEINS.[accessedResource: MSH:D006975][accessDate: 04-11-2010]
James Malone
Abnormal increase of resistance to blood flow within the hepatic PORTAL SYSTEM, frequently seen in LIVER CIRRHOSIS and conditions with obstruction of the PORTAL VEIN.
Cruveilhier Baumgarten Syndrome
portal hypertension
Portal Hypertensions[accessedResource: MSH:D006975][accessDate: 04-11-2010]
SNOMEDCT:34742003
Tomasz Adamusiak
ILSXISS84/TejJ
http://jaxmice.jax.org/strain/009317.html
An acute myeloid leukemia (AML) in which the blasts do not show evidence of myeloid differentiation by morphology and conventional cytochemistry. The myeloid origin of the blasts is demonstrated by immunohistochemistry and/or electron microscopic studies. The patients present with anemia, neutropenia, and thrombocytopenia. The prognosis is usually poor. (WHO, 2001)[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
M0 Acute Myelogenous Leukemia[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
Acute Myeloid Leukemia with Minimal Differentiation[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
M0 Myeloid Leukemia with Minimal Differentiation
Acute Myeloid Leukemia, Minimally Differentiated
NCIt:C8460
Acute Myeloid Leukemia with Minimal Differentiation
M0 Acute Myelocytic Leukemia[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
M0 Acute Myelogenous Leukemia with Minimal Differentiation
Acute Myelocytic Leukemia with Minimal Differentiation
Acute Myelogenous Leukemia with Minimal Differentiation
Acute Myeloblastic Leukemia with Minimal Differentiation
M0 Acute Granulocytic Leukemia[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
M0 Acute Granulocytic Leukemia
M0 Acute Myeloblastic Leukemia
minimally differentiated AML
AML with Minimal Differentiation[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
M0 Acute Myeloblastic Leukemia[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
Acute Myelogenous Leukemia with Minimal Differentiation[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
Acute Myeloid Leukemia with Minimal Differentiation (MO)
M0 Acute Granulocytic Leukemia with Minimal Differentiation[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
M0 Acute Granulocytic Leukemia with Minimal Differentiation
Acute Myeloid Leukemia with Minimal Differentiation (MO)[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
minimally differentiated acute myeloblastic leukemia
Acute Myeloid Leukemia, Minimally Differentiated[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
Acute Myeloblastic Leukemia with Minimal Differentiation[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
Acute Myelocytic Leukemia with Minimal Differentiation[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
An acute myeloid leukemia (AML) in which the blasts do not show evidence of myeloid differentiation by morphology and conventional cytochemistry. The myeloid origin of the blasts is demonstrated by immunohistochemistry and/or electron microscopic studies. The patients present with anemia, neutropenia, and thrombocytopenia. The prognosis is usually poor. (WHO, 2001)
M0 Acute Myelogenous Leukemia with Minimal Differentiation[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
Tomasz Adamusiak
AML with Minimal Differentiation
M0 Myeloid Leukemia
M0 Acute Myelocytic Leukemia
M0 Myeloid Leukemia with Minimal Differentiation[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
M0 Myeloid Leukemia[accessedResource: NCIt:C8460][accessDate: 04-11-2010]
M0 Acute Myelogenous Leukemia
(S)-(-)-5-aminosulfonyl-N-[(1-ethyl-2-pyrrolidinyl)meth yl]-2-methoxybenzamide
DSSTox_Generic_SID:C15H23N3O4S
STRUCTURE_Formula:N-{[(2S)-1-ethylpyrrolidin-2-yl]methyl}-2-methoxy-5-sulfamoylbenzamide
CASRN:23672-07-3
Ele Holloway
Tomasz Adamusiak
James Malone
DSSTox_CID:42583
(S)-(-)-sulpiride
Tomasz Adamusiak
STRUCTURE_Formula:C21H26N2O7
Ele Holloway
DSSTox_Generic_SID:23370
STRUCTURE_ChemicalName_IUPAC:1-methylethyl 2-(methyloxy)ethyl 2,6-dimethyl-4-(3-nitrophenyl)-1,4-dihydropyridine-3,5-dicarboxylate
nimodipine
James Malone
DSSTox_CID:3370
CASRN:66085-59-4
EMAPA:17532
TAO:0000509
ZFA:0000509
Brain structure which is part of the diencephalon and consists of the dorsal and ventral nuclei of the habenula, and two dorsal outgrowths, the epiphysis and the saccus dorsalis. From Neuroanatomy of the Zebrafish Brain.
epithalamus
BTO:0000175
EHDAA:5433
The caudal part of the roof and the adjoining lateral walls of the third ventricle of the diencephalon, comprising the habenular nuclei and their commissure, pineal body, and commissure of the epithalamus.[accessedResource: BTO:0000175][accessDate: 04-11-2010]
MA:0000172
MAT:0000422
NIFSTD:birnlex_1710
Brain structure which is part of the diencephalon and consists of the dorsal and ventral nuclei of the habenula, and two dorsal outgrowths, the epiphysis and the saccus dorsalis. From Neuroanatomy of the Zebrafish Brain.[accessedResource: ZFA:0000509][accessDate: 04-11-2010]
MFO:0079980
The caudal part of the roof and the adjoining lateral walls of the third ventricle of the diencephalon, comprising the habenular nuclei and their commissure, pineal body, and commissure of the epithalamus.
FMAID:62009
James Malone
Tomasz Adamusiak
Adrenal cortical carcinoma (morphologic abnormality)
An adrenal carcinoma that forms in the outer layer of tissue of the adrenal gland.
carcinoma of the Adrenal cortex
adrenocortical carcinoma
Tomasz Adamusiak
carcinoma of the Adrenal cortex[accessedResource: DOID:3948][accessDate: 04-11-2010]
DOID:3948
An adrenal carcinoma that forms in the outer layer of tissue of the adrenal gland.[accessedResource: DOID:3948][accessDate: 04-11-2010]
Adrenal cortical carcinoma (morphologic abnormality)[accessedResource: DOID:3948][accessDate: 04-11-2010]
An abnormal triangular fold of membrane in the interpalpebral fissure, extending from the conjunctiva to the cornea, being immovably united to the cornea at its apex, firmly attached to the sclera throughout its middle portion, and merged with the conjunctiva at its base. (Dorland, 27th ed)
conjunctival pterygium[accessedResource: DOID:10526][accessDate: 04-11-2010]
Web eye
Pterygium, unspecified
DOID:10526
GeneRIF:14533030
SNOMEDCT:193884009
pterygium
Pterygiums
GeneRIF:15273656
Pterygium NOS (disorder)[accessedResource: SNOMEDCT:193884009][accessDate: 04-11-2010]
Pterygium, NOS
Pterygium (disorder)[accessedResource: SNOMEDCT:77489003][accessDate: 04-11-2010]
Pterygium NOS[accessedResource: SNOMEDCT:193884009][accessDate: 04-11-2010]
James Malone
Conjunctival Pterygium
GeneRIF:15523624
ICD9:372.40
MSH:D011625
Web eye[accessedResource: DOID:10526][accessDate: 04-11-2010]
SNOMEDCT:77489003
Pterygium (disorder)
Pterygium NOS (disorder)
GeneRIF:12827055
Unspecified pterygium (disorder)[accessedResource: SNOMEDCT:193879003][accessDate: 04-11-2010]
SNOMEDCT:193879003
ICD9:372.4
Unspecified pterygium[accessedResource: SNOMEDCT:193879003][accessDate: 04-11-2010]
An abnormal triangular fold of membrane in the interpalpebral fissure, extending from the conjunctiva to the cornea, being immovably united to the cornea at its apex, firmly attached to the sclera throughout its middle portion, and merged with the conjunctiva at its base. (Dorland, 27th ed)[accessedResource: MSH:D011625][accessDate: 04-11-2010]
Unspecified pterygium (disorder)
Pterygiums[accessedResource: MSH:D011625][accessDate: 04-11-2010]
Helen Parkinson
A disease affecting the kidneys
kidney disease
nephropathy
renal system disease
NCIt:C61299
The act of directing or determining; regulation or maintenance of a function or action; a relation of constraint of one entity (thing or person or group) by another.
Controlling[accessedResource: NCIt:C61299][accessDate: 04-11-2010]
Controlling
A control role is borne by a material in a process in which results obtained from an experimental sample and a control sample are compared.
The act of directing or determining; regulation or maintenance of a function or action; a relation of constraint of one entity (thing or person or group) by another.[accessedResource: NCIt:C61299][accessDate: 04-11-2010]
reference sample
Controlled[accessedResource: NCIt:C61299][accessDate: 04-11-2010]
Controlled
control
James Malone
Tomasz Adamusiak
occipital lateral line neuromast
ZFA:0001025
Tomasz Adamusiak
ILSXISS123/TejJ
http://jaxmice.jax.org/strain/009295.html
appendix
MA:00001540
vermiform appendix[accessedResource: BTO:0000084][accessDate: 04-11-2010]
SAEL:7
A narrow blind tube usually about three or four inches (7.6 to 10.2 centimeters) long that extends from the cecum in the lower right-hand part of the abdomen, has much lymphoid wall tissue, normally communicates with the cavity of the cecum, and represents an atrophied terminal part of the cecum.
Organ with organ cavity which is continuous proximally with the cecum and distally terminates in the tip of the appendix. Examples: There is only one appendix.
BTO:0000084
James Malone
MAT:0000287
EV:0100080
vermiform appendix
A narrow blind tube usually about three or four inches (7.6 to 10.2 centimeters) long that extends from the cecum in the lower right-hand part of the abdomen, has much lymphoid wall tissue, normally communicates with the cavity of the cecum, and represents an atrophied terminal part of the cecum.[accessedResource: BTO:0000084][accessDate: 04-11-2010]
FMAID:14542
GeneRIF:11856346
GeneRIF:15725473
GeneRIF:11986947
GeneRIF:16210627
GeneRIF:15541480
GeneRIF:14615372
Leukaemia of unspecified cell type[accessedResource: SNOMEDCT:188762002][accessDate: 04-11-2010]
GeneRIF:15856008
GeneRIF:11986949
GeneRIF:15475071
Other specified leukemia[accessedResource: SNOMEDCT:188751002][accessDate: 04-11-2010]
Other specified leukemia without mention of remission[accessedResource: ICD9:207.80][accessDate: 04-11-2010]
GeneRIF:14630792
GeneRIF:12682273
GeneRIF:12506112
Leukemia morphology[accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
ICD9:208
GeneRIF:12688322
GeneRIF:11823049
Leukemia, morphology (morphologic abnormality)[accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
Unspecified leukemia
Chronic leukaemia [obs]
Leukemias, General
GeneRIF:12186695
chronic leukemia, disease (disorder)
Leukemia, morphology (morphologic abnormality)
GeneRIF:11979742
GeneRIF:12208881
chronic leukemia - category (morphologic abnormality)
GeneRIF:15676214
leukemia
GeneRIF:12438221
chronic leukaemia NOS
chronic leukemia - category (morphologic abnormality)[accessedResource: DOID:1240][accessDate: 04-11-2010]
Chronic leukemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
Other specified leukaemia[accessedResource: SNOMEDCT:188751002][accessDate: 04-11-2010]
GeneRIF:15144712
GeneRIF:15325703
Leukemias, General[accessedResource: NCIt:C3161][accessDate: 04-11-2010]
GeneRIF:14691303
GeneRIF:12082639
[X]Other specified leukaemias[accessedResource: SNOMEDCT:190161003][accessDate: 04-11-2010]
SNOMEDCT:190161003
Blood (Leukemia)[accessedResource: NCIt:C3161][accessDate: 04-11-2010]
GeneRIF:14726393
chronic leukemia
Leukaemia, no ICD-O subtype[accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
Leukemia morphology
GeneRIF:15026336
ICD9:208.8
ICD9:207.80
GeneRIF:16179912
Leukemia, no ICD-O subtype[accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
ICD9:208.80
GeneRIF:14521941
chronic leukaemia NOS[accessedResource: DOID:1240][accessDate: 04-11-2010]
Leukemia of unspecified cell type (disorder)[accessedResource: SNOMEDCT:188762002][accessDate: 04-11-2010]
Other specified leukaemia NOS
GeneRIF:11999556
GeneRIF:12384147
[X]Other specified leukemias
ICD9:208.90
Leukemia, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
Other leukemia of unspecified cell type (disorder)[accessedResource: SNOMEDCT:188766004][accessDate: 04-11-2010]
Leukaemia NOS[accessedResource: SNOMEDCT:188767008][accessDate: 04-11-2010]
GeneRIF:15515013
GeneRIF:12002748
Other specified leukemia NOS
[M]leukemia unspecified, NOS (morphologic abnormality)
chronic leukemia NOS[accessedResource: DOID:1240][accessDate: 04-11-2010]
[M]leukemia unspecified, NOS (morphologic abnormality)[accessedResource: SNOMEDCT:190029004][accessDate: 04-11-2010]
[M]Leukemias unspecified[accessedResource: SNOMEDCT:190024009][accessDate: 04-11-2010]
Other leukemia of unspecified cell type in remission
GeneRIF:15705792
GeneRIF:10437917
GeneRIF:11922610
GeneRIF:15298960
chronic leukemia[accessedResource: DOID:1240][accessDate: 04-11-2010]
GeneRIF:12127563
Leukaemia, NOS, without mention of remission
[X]Other specified leukemias (disorder)[accessedResource: SNOMEDCT:190161003][accessDate: 04-11-2010]
GeneRIF:12700665
GeneRIF:15674415
GeneRIF:15860672
Other leukaemia of unspecified cell type
GeneRIF:11855785
Leukemia, NOS, without mention of remission
GeneRIF:16103065
GeneRIF:11999550
Chronic leukemia [obs]
GeneRIF:12533044
OTH SPF LEUK W/O REMSION[accessedResource: ICD9:207.80][accessDate: 04-11-2010]
GeneRIF:14607752
chronic leukemia NOS
Other specified leukemia (disorder)
Other specified leukaemia NOS[accessedResource: SNOMEDCT:188761009][accessDate: 04-11-2010]
[M]Leukemia NOS[accessedResource: SNOMEDCT:190025005][accessDate: 04-11-2010]
GeneRIF:16088313
[M]leukemias unspecified (morphologic abnormality)[accessedResource: SNOMEDCT:190024009][accessDate: 04-11-2010]
GeneRIF:12414343
GeneRIF:16130282
GeneRIF:15687235
Other specified leukemia NOS (disorder)
[M]Leukaemia NOS
GeneRIF:14519654
[X]Other specified leukemias[accessedResource: SNOMEDCT:190161003][accessDate: 04-11-2010]
Leukemia of unspecified cell type
GeneRIF:15004329
GeneRIF:15070702
Other specified leukemia without mention of remission
GeneRIF:12901974
GeneRIF:12096343
GeneRIF:11042511
GeneRIF:14662771
GeneRIF:12592338
GeneRIF:12239155
GeneRIF:12139489
GeneRIF:14689061
DOID:1240
GeneRIF:14671643
SNOMEDCT:188767008
Leukemia NOS (disorder)
OTH LEUK UNS CL W RMSON
Leukaemia, no ICD-O subtype
Other specified leukemia
Leukaemia of unspecified cell type
ICD9:208.81
[X]Other leukaemia of unspecified cell type
GeneRIF:14990976
[M]Leukemias unspecified
Other leukemia of unspecified cell type (disorder)
GeneRIF:12515866
GeneRIF:12700639
Other leukemia of unspecified cell type in remission[accessedResource: ICD9:208.81][accessDate: 04-11-2010]
SNOMEDCT:190024009
GeneRIF:12217801
Subacute leukaemia [obs]
GeneRIF:11996108
GeneRIF:16271957
GeneRIF:14512321
GeneRIF:12816872
chronic leukemia, disease (disorder)[accessedResource: DOID:1240][accessDate: 04-11-2010]
SNOMEDCT:188751002
ICD9:207.81
A cancer that affects the blood or bone marrow characterized by an abnormal proliferation of blood cells.[accessedResource: DOID:1240][accessDate: 04-11-2010]
GeneRIF:12393632
Leukemia NOS (disorder)[accessedResource: SNOMEDCT:188767008][accessDate: 04-11-2010]
GeneRIF:15512811
OTH SPF LEUK W REMSION[accessedResource: ICD9:207.81][accessDate: 04-11-2010]
GeneRIF:14578205
GeneRIF:15704129
GeneRIF:12511424
GeneRIF:15744340
GeneRIF:12613527
Aleukaemic leukaemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
Other specified leukemia NOS (disorder)[accessedResource: SNOMEDCT:188761009][accessDate: 04-11-2010]
GeneRIF:15756419
GeneRIF:15351976
Leukemia, no ICD-O subtype (morphologic abnormality)
Leukaemia, NOS, without mention of remission[accessedResource: SNOMEDCT:93143009][accessDate: 04-11-2010]
Leukaemia NOS
ICD9:207.8
Leukemia, disease (disorder)
Leukemia, NOS[accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
[X]Other leukemia of unspecified cell type (disorder)[accessedResource: SNOMEDCT:190162005][accessDate: 04-11-2010]
chronic leukemia of unspecified cell type[accessedResource: DOID:1240][accessDate: 04-11-2010]
NCIt:C3161
GeneRIF:15298716
GeneRIF:12008082
GeneRIF:15895983
GeneRIF:11830488
[X]Other leukemia of unspecified cell type
Other leukemia of unspecified cell type[accessedResource: ICD9:208.8][accessDate: 04-11-2010]
[X]Other leukaemia of unspecified cell type[accessedResource: SNOMEDCT:190162005][accessDate: 04-11-2010]
GeneRIF:16002684
Leukemia of unspecified cell type (disorder)
GeneRIF:15388576
GeneRIF:12145704
A malignant (clonal) hematologic disorder, involving hematopoietic stem cells and characterized by the presence of primitive or atypical myeloid or lymphoid cells in the bone marrow and the blood. Leukemias are classified as acute or chronic based on the degree of cellular differentiation and the predominant cell type present. Leukemia is usually associated with anemia, fever, hemorrhagic episodes, and splenomegaly. Common leukemias include acute myeloid leukemia, chronic myelogenous leukemia, acute lymphoblastic or precursor lymphoblastic leukemia, and chronic lymphocytic leukemia. Treatment is vital to patient survival; untreated, the natural course of acute leukemias is normally measured in weeks or months, while that of chronic leukemias is more often measured in months or years.[accessedResource: NCIt:C3161][accessDate: 04-11-2010]
Leukaemia morphology
OTH LEUK UNS CL W/O RMSN
[M]Leukaemia unspecified, NOS
OTH LEUK UNS CL W/O RMSN[accessedResource: ICD9:208.80][accessDate: 04-11-2010]
Leukemia, disease (disorder)[accessedResource: SNOMEDCT:93143009][accessDate: 04-11-2010]
GeneRIF:14611815
Subacute leukaemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
Other specified leukaemia
GeneRIF:12538698
Leukaemia[accessedResource: SNOMEDCT:93143009][accessDate: 04-11-2010]
GeneRIF:15723065
GeneRIF:15604256
Leukemias[accessedResource: NCIt:C3161][accessDate: 04-11-2010]
GeneRIF:12682649
Other leukemia of unspecified cell type
Leukaemia, disease
GeneRIF:12553058
GeneRIF:15545599
GeneRIF:11937542
[M]Leukemia unspecified, NOS
GeneRIF:12773566
GeneRIF:15964800
A malignant (clonal) hematologic disorder, involving hematopoietic stem cells and characterized by the presence of primitive or atypical myeloid or lymphoid cells in the bone marrow and the blood. Leukemias are classified as acute or chronic based on the degree of cellular differentiation and the predominant cell type present. Leukemia is usually associated with anemia, fever, hemorrhagic episodes, and splenomegaly. Common leukemias include acute myeloid leukemia, chronic myelogenous leukemia, acute lymphoblastic or precursor lymphoblastic leukemia, and chronic lymphocytic leukemia. Treatment is vital to patient survival; untreated, the natural course of acute leukemias is normally measured in weeks or months, while that of chronic leukemias is more often measured in months or years.
GeneRIF:12454742
Leukemia, disease[accessedResource: SNOMEDCT:93143009][accessDate: 04-11-2010]
SNOMEDCT:188766004
Leukemias
chronic leukemia NOS (disorder)
GeneRIF:15183893
Chronic leukaemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
GeneRIF:12646947
GeneRIF:12145702
GeneRIF:15454492
[X]Other specified leukaemias
[M]Leukaemias unspecified
GeneRIF:12592353
GeneRIF:15815718
GeneRIF:12665591
GeneRIF:15223639
GeneRIF:12239152
Leukaemia, disease[accessedResource: SNOMEDCT:93143009][accessDate: 04-11-2010]
GeneRIF:11893077
GeneRIF:12203795
GeneRIF:12204872
Other leukaemia of unspecified cell type[accessedResource: SNOMEDCT:188766004][accessDate: 04-11-2010]
Other specified leukemia in remission
GeneRIF:12648450
GeneRIF:12411326
GeneRIF:15068389
GeneRIF:12091340
GeneRIF:15073036
GeneRIF:12225794
Subacute leukemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
GeneRIF:15187020
Aleukemic leukemia [obs][accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
GeneRIF:16081688
GeneRIF:16139274
LEUKEMIA NOS W/O REMSION[accessedResource: ICD9:208.90][accessDate: 04-11-2010]
GeneRIF:11920534
Unspecified leukemia[accessedResource: ICD9:208.9][accessDate: 04-11-2010]
GeneRIF:16005964
GeneRIF:15193261
GeneRIF:11869944
SNOMEDCT:190025005
GeneRIF:15723339
GeneRIF:12096925
GeneRIF:12393620
GeneRIF:15585652
[M]Leukemia NOS
OTH LEUK UNS CL W RMSON[accessedResource: ICD9:208.81][accessDate: 04-11-2010]
GeneRIF:15567461
GeneRIF:11929767
GeneRIF:12002276
ICD9:207
GeneRIF:15583855
This is potentially too broad as well as overlaps with lymphoma and should be obsoleted.
GeneRIF:14988155
GeneRIF:14737102
ICD9:208.9
GeneRIF:15735695
Unspecified leukemia without mention of remission
GeneRIF:15834506
[X]Other leukemia of unspecified cell type (disorder)
LEUKEMIA NOS W/O REMSION
GeneRIF:15833859
GeneRIF:15516987
GeneRIF:15856017
Aleukemic leukemia [obs]
GeneRIF:15304397
Unspecified leukemia without mention of remission[accessedResource: ICD9:208.90][accessDate: 04-11-2010]
GeneRIF:14996839
[X]Other leukemia of unspecified cell type[accessedResource: SNOMEDCT:190162005][accessDate: 04-11-2010]
GeneRIF:12482966
GeneRIF:12183458
Other leukemia of unspecified cell type without mention of remission[accessedResource: ICD9:208.80][accessDate: 04-11-2010]
SNOMEDCT:93143009
GeneRIF:15845894
GeneRIF:15199122
SNOMEDCT:190029004
[M]leukemias unspecified (morphologic abnormality)
Other specified leukemia (disorder)[accessedResource: SNOMEDCT:188751002][accessDate: 04-11-2010]
GeneRIF:14757439
GeneRIF:12663445
Leukemia, disease
GeneRIF:11792409
SNOMEDCT:87163000
Leukemia, no ICD-O subtype
[M]leukemia NOS (morphologic abnormality)[accessedResource: SNOMEDCT:190025005][accessDate: 04-11-2010]
[M]Leukaemia NOS[accessedResource: SNOMEDCT:190025005][accessDate: 04-11-2010]
[M]leukemia NOS (morphologic abnormality)
GeneRIF:15475073
[M]Leukaemia unspecified, NOS[accessedResource: SNOMEDCT:190029004][accessDate: 04-11-2010]
Leukemia, NOS, without mention of remission[accessedResource: SNOMEDCT:93143009][accessDate: 04-11-2010]
James Malone
SNOMEDCT:190162005
Other specified leukemia in remission[accessedResource: ICD9:207.81][accessDate: 04-11-2010]
[X]Other specified leukemias (disorder)
Other specified leukemia NOS[accessedResource: SNOMEDCT:188761009][accessDate: 04-11-2010]
SNOMEDCT:188762002
GeneRIF:11764099
GeneRIF:12586625
GeneRIF:12799277
GeneRIF:12705477
GeneRIF:14704031
Other leukemia of unspecified cell type without mention of remission
GeneRIF:15611294
OTH SPF LEUK W/O REMSION
Leukemia of unspecified cell type[accessedResource: ICD9:208][accessDate: 04-11-2010]
Aleukaemic leukaemia [obs]
Blood (Leukemia)
GeneRIF:12722639
GeneRIF:12138900
OTH SPF LEUK W REMSION
GeneRIF:15723338
GeneRIF:15645140
GeneRIF:15959530
[M]Leukaemias unspecified[accessedResource: SNOMEDCT:190024009][accessDate: 04-11-2010]
Leukemia, NOS
GeneRIF:12496475
[M]Leukemia unspecified, NOS[accessedResource: SNOMEDCT:190029004][accessDate: 04-11-2010]
chronic leukemia of unspecified cell type
chronic leukemia NOS (disorder)[accessedResource: DOID:1240][accessDate: 04-11-2010]
Leukaemia morphology[accessedResource: SNOMEDCT:87163000][accessDate: 04-11-2010]
GeneRIF:16109713
GeneRIF:11489963
Leukaemia
SNOMEDCT:188761009
Subacute leukemia [obs]
A cancer that affects the blood or bone marrow characterized by an abnormal proliferation of blood cells.
paragonium[accessedResource: FBbt:00004959][accessDate: 04-11-2010]
James Malone
male accessory gland
FBbt:00004959
paragonium
Tomasz Adamusiak
lateral line ganglion
ZFA:0000120
Monoclonal Gammopathy of Unknown Significance[accessedResource: NCIt:C3996][accessDate: 04-11-2010]
Benign Monoclonal Gammopathy
Monoclonal Gammopathy of Unknown Significance
MGUS - Monoclonal gammopathy of uncertain significance[accessedResource: SNOMEDCT:277577000][accessDate: 04-11-2010]
MGUS[accessedResource: DOID:7442][accessDate: 04-11-2010]
monoclonal gammopathy
DOID:7442
MGUS - Monoclonal gammopathy of uncertain significance
Paraproteinemia
Monoclonal gammopathy of uncertain significance
A plasma cell disorder in which an abnormal amount of a single immunoglobulin is present in the serum. Up to 25% of cases of monoclonal gammopathy of undetermined significance (MGUS) progress to a B-cell malignancy or myeloma. MGUS may occur in conjunction with various carcinomas, chronic inflammatory and infectious conditions, and other diseases.
Benign Monoclonal Gammopathy[accessedResource: NCIt:C3996][accessDate: 04-11-2010]
monoclonal gammopathy of uncertain significance[accessedResource: DOID:7442][accessDate: 04-11-2010]
Monoclonal gammopathy of undetermined significance[accessedResource: SNOMEDCT:35601003][accessDate: 04-11-2010]
MGUS
Paraproteinemia[accessedResource: SNOMEDCT:35601003][accessDate: 04-11-2010]
Monoclonal gammopathy of uncertain significance (disorder)[accessedResource: SNOMEDCT:277577000][accessDate: 04-11-2010]
Monoclonal gammopathy of undetermined significance
A plasma cell disorder in which an abnormal amount of a single immunoglobulin is present in the serum. Up to 25% of cases of monoclonal gammopathy of undetermined significance (MGUS) progress to a B-cell malignancy or myeloma. MGUS may occur in conjunction with various carcinomas, chronic inflammatory and infectious conditions, and other diseases.[accessedResource: NCIt:C3996][accessDate: 04-11-2010]
Paraproteinaemia
NCIt:C3996
Monoclonal Gammopathy Of Undetermined Significance (MGUS)[accessedResource: NCIt:C3996][accessDate: 04-11-2010]
Monoclonal gammopathy of undetermined significance (morphologic abnormality)
GeneRIF:14677065
Paraproteinaemia[accessedResource: SNOMEDCT:35601003][accessDate: 04-11-2010]
Monoclonal gammopathy of uncertain significance (disorder)
SNOMEDCT:277577000
James Malone
Monoclonal Gammopathy Of Undetermined Significance (MGUS)
Monoclonal gammopathy of undetermined significance (morphologic abnormality)[accessedResource: DOID:7442][accessDate: 04-11-2010]
SNOMEDCT:35601003
true
obsolete_percent oxygen concentration
Jie Zheng
Tomasz Adamusiak
embryonic day 12.5
Tomasz Adamusiak
presumptive mesoderm
ZFA:0001377
Helen Parkinson
An instrument which consists of nucleic acid or protein molecules bound to a substrate
array
microarray
James Malone
Ele Holloway
HT1376
HT-1376
James Malone
IB3-1
Tomasz Adamusiak
foot
FMAID:9664
James Malone
true
2.5
duplicate of EFO_0000182
obsolete_liver heptocellular carcinoma
Ele Holloway
James Malone
DSSTox_Generic_SID:24097
Tomasz Adamusiak
2-butoxyethanol
DSSTox_CID:4097
STRUCTURE_ChemicalName_IUPAC:2-butoxyethanol
CASRN:111-76-2
STRUCTURE_Formula:C6H14O2
BTO:0002383
MKN74
Ele Holloway
Well differentiated human gastric adenocarcinoma cell line.[accessedResource: BTO:0002383][accessDate: 04-11-2010]
James Malone
JCRB0255
MKN74 cell
MKN-74 cell
MKN74 cell[accessedResource: BTO:0002383][accessDate: 04-11-2010]
MKN-74 cell[accessedResource: BTO:0002383][accessDate: 04-11-2010]
Well differentiated human gastric adenocarcinoma cell line.
MKN-74
James Malone
CS57874 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158898&type=germplasm
CS57874
http://www.arabidopsis.org/servlets/TairObject?id=1005158898&type=germplasm
scopolamine
(1R,2R,4S,5S,7S)-9-methyl-3-oxa-9-azatricyclo[3.3.1.02,4]non-7-yl (2S)-3-hydroxy-2-phenylpropanoate
23573
3573
51-34-3
C17H21NO4
Tomasz Adamusiak
LP1
PMID:2784066
lp-1
Tomasz Adamusiak
somite 13
ZFA:0000975
KS[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
Kaposi's sarcoma-associated herpesvirus (KSHV)[accessedResource: DOID:8632][accessDate: 04-11-2010]
A malignant neoplasm characterized by a vascular proliferation which usually contains blunt endothelial cells. Erythrocyte extravasation and hemosiderin deposition are frequently present. The most frequent site of involvement is the skin; however it may also occur internally. It generally develops in people with compromised immune systems including those with acquired immune deficiency syndrome (AIDS).[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
[M]Kaposi's sarcoma[accessedResource: SNOMEDCT:49937004][accessDate: 04-11-2010]
GeneRIF:15246275
A sarcoma and Human herpesvirus 8 infectious disease that is transmitted_by human herpesvirus 8 (HHV8).
Kaposi's sarcoma, other specified sites[accessedResource: ICD9:176.8][accessDate: 04-11-2010]
Kaposi's sarcoma (morphologic abnormality)
GeneRIF:12719589
Kaposi's sarcoma
SPF STS - KPSI'S SARCOMA[accessedResource: ICD9:176.8][accessDate: 04-11-2010]
Kaposi's sarcoma (clinical)[accessedResource: SNOMEDCT:109385007][accessDate: 04-11-2010]
Epidemic Kaposi's sarcoma
SNOMEDCT:190112000
ICD9:176.9
SNOMEDCT:49937004
Multiple Hemorrhagic Sarcoma
Epidemic Kaposi's sarcoma[accessedResource: SNOMEDCT:109385007][accessDate: 04-11-2010]
ICD9:176
Kaposi Sarcoma
Kaposi sarcoma[accessedResource: SNOMEDCT:109385007][accessDate: 04-11-2010]
[X]Kaposi's sarcoma, unspecified (disorder)
GeneRIF:12915577
Kaposi - Kaposi's Sarcoma
Kaposi's sarcoma, morphology (morphologic abnormality)
Kaposi sarcoma, morphology[accessedResource: SNOMEDCT:49937004][accessDate: 04-11-2010]
Kaposi's sarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:49937004][accessDate: 04-11-2010]
GeneRIF:12875994
Kaposi's sarcoma, unspecified
KS - Kaposi's sarcoma[accessedResource: SNOMEDCT:109385007][accessDate: 04-11-2010]
GeneRIF:12388718
GeneRIF:15331727
GeneRIF:12176919
GeneRIF:14627715
Kaposi's sarcoma, other specified sites
Kaposi's sarcoma (disorder)[accessedResource: SNOMEDCT:109385007][accessDate: 04-11-2010]
Kaposi's sarcoma, morphology (morphologic abnormality)[accessedResource: SNOMEDCT:49937004][accessDate: 04-11-2010]
GeneRIF:12513914
GeneRIF:15220403
GeneRIF:12592400
Kaposi's sarcoma, morphology
GeneRIF:15964376
GeneRIF:12915579
Kaposi - Kaposi's Sarcoma[accessedResource: NCIt:C9087][accessDate: 04-11-2010]
KS
A sarcoma that is caused by human herpesvirus 8 (HHV8), which is also called Kaposi's sarcoma-associated herpesvirus (KSHV).
Kaposi's sarcoma-associated herpesvirus (KSHV)
[X]Kaposi's sarcoma, unspecified (disorder)[accessedResource: SNOMEDCT:190112000][accessDate: 04-11-2010]
GeneRIF:15765147
A sarcoma and Human herpesvirus 8 infectious disease that is transmitted_by human herpesvirus 8 (HHV8).[accessedResource: DOID:8632][accessDate: 04-11-2010]
GeneRIF:15194757
GeneRIF:15471957
KS - Kaposi's sarcoma
Multiple haemorrhagic sarcoma[accessedResource: SNOMEDCT:49937004][accessDate: 04-11-2010]
ICD9:176.8
GeneRIF:12531804
Multiple haemorrhagic sarcoma
KAPOSI'S SARCOMA NOS
KAPOSI'S SARCOMA NOS[accessedResource: ICD9:176.9][accessDate: 04-11-2010]
DOID:8632
[M]Kaposi's sarcoma
SNOMEDCT:109385007
Multiple hemorrhagic sarcoma[accessedResource: SNOMEDCT:49937004][accessDate: 04-11-2010]
[X]Kaposi's sarcoma, unspecified[accessedResource: SNOMEDCT:190112000][accessDate: 04-11-2010]
GeneRIF:15994556
James Malone
A malignant neoplasm characterized by a vascular proliferation which usually contains blunt endothelial cells. Erythrocyte extravasation and hemosiderin deposition are frequently present. The most frequent site of involvement is the skin; however it may also occur internally. It generally develops in people with compromised immune systems including those with acquired immune deficiency syndrome (AIDS).
Kaposi's sarcoma, morphology[accessedResource: SNOMEDCT:49937004][accessDate: 04-11-2010]
Kaposi's sarcoma, unspecified[accessedResource: ICD9:176.9][accessDate: 04-11-2010]
Kaposi sarcoma, morphology
GeneRIF:15280476
NCIt:C9087
SPF STS - KPSI'S SARCOMA
Kaposi's sarcoma (disorder)
Kaposi's sarcoma (clinical)
[X]Kaposi's sarcoma, unspecified
GeneRIF:12388720
GeneRIF:12750160
One of the repeated divisions of the whole organism.
James Malone
segment
segment[accessedResource: FBbt:00000003][accessDate: 04-11-2010]
One of the repeated divisions of the whole organism.[accessedResource: FBbt:00000003][accessDate: 04-11-2010]
MAT:0000271
adult segment
FBbt:00000003
James Malone
http://www.ebi.ac.uk/efo/EFO_0001581
A surfactant with an uncharged hydrophilic headgroup.
non ionic surfactant
nonionic surfactant
nonionic surfactants
PO:0006344
MAT:0000225
lateral shoot meristem
OntologyMappingImporter following MAT:0000225
James Malone
Ele Holloway
James Malone
MV4II
Tomasz Adamusiak
OVCAR3
MCC:0000363
phosphate
14265-44-2
19672
39672
O4P
phosphate
Subdivision of common carotid artery[accessedResource: FMA:70504][accessDate: 04-11-2010]
James Malone
division of carotid artery
FMA:70504
Common carotid arterial subdivision
Subdivision of common carotid artery
Ele Holloway
James Malone
Detroit562
Detroit 562
granulosa cell of ovary
TO:0000542
granulosa cell
A supporting cell for the developing female gamete in the ovary of mammals. They develop from the coelomic epithelial cells of the gonadal ridge. Granulosa cells form a single layer around the mammalian oocyte in the primordial ovarian follicle and advance to form a multilayered cumulus oophorus surrounding the ovum in the Graafian follicle. The major functions of granulosa cells include the production of steroids and LH receptors.
A supporting cell for the developing female gamete in the ovary of mammals. They develop from the coelomic epithelial cells of the gonadal ridge. Granulosa cells form a single layer around the mammalian oocyte in the primordial ovarian follicle and advance to form a multilayered cumulus oophorus surrounding the ovum in the Graafian follicle. The major functions of granulosa cells include the production of steroids and LH receptors.[accessedResource: CL:0000501][accessDate: 04-11-2010]
granulosa cell of ovary[accessedResource: CL:0000501][accessDate: 04-11-2010]
CL:0000501
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#reference_design[accessedResource: MO_699][accessDate: 04-11-2010]
Tomasz Adamusiak
reference design
MO_699
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#reference_design
Obsolete: No longer required in EFO
James Malone
true
obsolete_bone marrow MMHCC
NCIt:C22552
Bone Marrow (MMHCC)
James Malone
GM12234
Jie Zheng
INS-1 cell[accessedResource: BTO:0002135][accessDate: 04-11-2010]
BTO:0002135
INS-1
Pancreatic beta -cell line of rat origin.[accessedResource: BTO:0002135][accessDate: 04-11-2010]
Tomasz Adamusiak
MCC:0000246
Pancreatic beta -cell line of rat origin.
INS-1 cell
Progressive external ophthalmoplegia (disorder)
progressive external ophthalmoplegia (disorder)[accessedResource: DOID:12558][accessDate: 04-11-2010]
chronic progressive external ophthalmoplegia [Ambiguous]
chronic progressive external ophthalmoplegia [Ambiguous][accessedResource: DOID:12558][accessDate: 04-11-2010]
DOID:12558
progressive external ophthalmoplegia
chronic progressive external ophthalmoplegia[accessedResource: DOID:12558][accessDate: 04-11-2010]
PEO syndrome
Ele Holloway
PEO
James Malone
HP:0000590
chronic progressive external ophthalmoplegia
The reproductive system in women includes the ovaries, the fallopian tubes, the uterus (womb), the cervix, and the vagina (birth canal).
The reproductive system in women includes the ovaries, the fallopian tubes, the uterus (womb), the cervix, and the vagina (birth canal).[accessedResource: BTO:0000083][accessDate: 04-11-2010]
.[accessedResource: FBbt:00004864][accessDate: 04-11-2010]
female organism[accessedResource: ZFA:0000303][accessDate: 04-11-2010]
EHDAA:8116
female organism
EV:0100110
James Malone
Gonochoristic organism that can produce female gametes.[accessedResource: ZFA:0000303][accessDate: 04-11-2010]
gynaecological tissue[accessedResource: BTO:0000083][accessDate: 04-11-2010]
Gonochoristic organism that can produce female gametes.
FBbt:00004864
gynaecological tissue
XAO:0000156
EMAPA:17959
MA:0000381
FMAID:45663
ZFA:0000303
female reproductive system
TADS:0000352
Female genital system[accessedResource: FMAID:45663][accessDate: 04-11-2010]
Female genital system
BTO:0000083
.
ZR751
James Malone
Gangliocytoma
A benign neuroblastic tumor of the sympathetic nervous system that occurs in childhood. Ganglioneuroma typically arises from the sympathetic trunk in the mediastinum. Histologic features include spindle cell proliferation (resembling a neurofibroma) and the presence of large ganglion cells. Common presenting features include a palpable abdominal mass, hepatomegaly, and a thoracic mass detected on routine chest X-ray.[accessedResource: NCIt:C3049][accessDate: 04-11-2010]
NCIt:C3049
James Malone
A benign neoplasm that usually arises from the sympathetic trunk in the mediastinum. Histologic features include spindle cell proliferation (resembling a neurofibroma) and the presence of large ganglion cells. The tumor may present clinically with HORNER SYNDROME or diarrhea due to ectopic production of vasoactive intestinal peptide (MeSH).[accessedResource: NIFSTD:birnlex_12617][accessDate: 04-11-2010]
Ganglioneuroma (Schwannian Stroma-Dominant)
A benign neoplasm that usually arises from the sympathetic trunk in the mediastinum. Histologic features include spindle cell proliferation (resembling a neurofibroma) and the presence of large ganglion cells. The tumor may present clinically with HORNER SYNDROME or diarrhea due to ectopic production of vasoactive intestinal peptide (MeSH).
Tomasz Adamusiak
ganglioneuroma
Ganglioneuroma (Schwannian Stroma-Dominant)[accessedResource: NCIt:C3049][accessDate: 04-11-2010]
A benign neuroblastic tumor of the sympathetic nervous system that occurs in childhood. Ganglioneuroma typically arises from the sympathetic trunk in the mediastinum. Histologic features include spindle cell proliferation (resembling a neurofibroma) and the presence of large ganglion cells. Common presenting features include a palpable abdominal mass, hepatomegaly, and a thoracic mass detected on routine chest X-ray.
Gangliocytoma[accessedResource: NIFSTD:birnlex_12617][accessDate: 04-11-2010]
NIFSTD:birnlex_12617
James Malone
vomeronasal organ
MA:0000289
5-Desoxyquercetin
CHEBI:42567
Oc1ccc2c(c1)oc(-c1ccc(O)c(O)c1)c(O)c2=O
InChIKey=XHEFDIBZLJXQHF-UHFFFAOYAQ
C15H10O6
fisetin
7,3',4'-Trihydroxyflavonol
3,3',4',7-Tetrahydroxyflavone
A tetrahydroxyflavone that has formula C15H10O6.
2-(3,4-dihydroxyphenyl)-3,7-dihydroxy-4H-chromen-4-one
InChI=1/C15H10O6/c16-8-2-3-9-12(6-8)21-15(14(20)13(9)19)7-1-4-10(17)11(18)5-7/h1-6,16-18,20H
http://www.ebi.ac.uk/efo/EFO_0001534
2-(3,4-Dihydroxyphenyl)-3,7-dihydroxy-4H-1-benzopyran-4-one
Ele Holloway
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0002734
calcineurin
CHEBI:53439
The slender tube formed by the pollen grain that penetrates an ovule and releases the male gametes.
PO:0006345
James Malone
BTO:0001276
pollen tube
MAT:0000217
The slender tube formed by the pollen grain that penetrates an ovule and releases the male gametes.[accessedResource: BTO:0001276][accessDate: 04-11-2010]
Ele Holloway
James Malone
SK-N-AS
SKNAS
TADS:0000057
esophagus
BTO:0000959
James Malone
oesophagus
A muscular tube that in humans is about nine inches (23 centimeters) long and passes from the pharynx down the neck between the trachea and the spinal column and behind the left bronchus where it pierces the diaphragm slightly to the left of the middle line and joins the cardiac end of the stomach.
The part of the stomodeum following the pharynx.
FMAID:7131
MFO:0003000
ZFA:0000204
A muscular tube that in humans is about nine inches (23 centimeters) long and passes from the pharynx down the neck between the trachea and the spinal column and behind the left bronchus where it pierces the diaphragm slightly to the left of the middle line and joins the cardiac end of the stomach.[accessedResource: BTO:0000959][accessDate: 04-11-2010]
XAO:0000127
Gullet[accessedResource: FMAID:7131][accessDate: 04-11-2010]
TGMA:0000134
adult oesophagus[accessedResource: TGMA:0000134][accessDate: 04-11-2010]
EMAPA:16833
EHDAA:2937
Organ with organ cavity which is continuous superiorly with the pharynx and inferiorly with the stomach. Examples: There is only one esophagus.
SAEL:74
EV:0100069
oesophagus[accessedResource: TAO:0000204][accessDate: 04-11-2010]
MAT:0000048
adult oesophagus
TAO:0000204
The part of the stomodeum following the pharynx.[accessedResource: TGMA:0000134][accessDate: 04-11-2010]
Gullet
FBbt:00005381
AAO:0000145
Disorder of porphyrin metabolism (disorder)[accessedResource: SNOMEDCT:29094004][accessDate: 04-11-2010]
Porphyria NOS
disorder of porphyrin and hem metabolism[accessedResource: DOID:13268][accessDate: 04-11-2010]
disorder of porphyrin and hem metabolism
Porphyria NOS (disorder)[accessedResource: DOID:13268][accessDate: 04-11-2010]
A diverse group of metabolic diseases characterized by errors in the biosynthetic pathway of HEME in the LIVER, the BONE MARROW, or both. They are classified by the deficiency of specific enzymes, the tissue site of enzyme defect, or the clinical features that include neurological (acute) or cutaneous (skin lesions). Porphyrias can be hereditary or acquired as a result of toxicity to the hepatic or erythropoietic marrow tissues.
Porphyria NOS (disorder)
SNOMEDCT:371628009
Porphyrinopathy (disorder)[accessedResource: SNOMEDCT:371628009][accessDate: 04-11-2010]
Disorder of porphyrin and heme metabolism[accessedResource: SNOMEDCT:29094004][accessDate: 04-11-2010]
Porphyria NOS[accessedResource: SNOMEDCT:190916001][accessDate: 04-11-2010]
Disorder of porphyrin metabolism, NOS[accessedResource: SNOMEDCT:29094004][accessDate: 04-11-2010]
DIS PORPHYRIN METABOLISM
MSH:D011164
Disorders of porphyrin metabolism (disorder)
Porphyrinopathy[accessedResource: SNOMEDCT:371628009][accessDate: 04-11-2010]
Porphyria (disorder)
ICD9:277.1
Porphyria (disorder)[accessedResource: DOID:13268][accessDate: 04-11-2010]
DIS PORPHYRIN METABOLISM[accessedResource: ICD9:277.1][accessDate: 04-11-2010]
SNOMEDCT:29094004
Porphyrias
Disorder of porphyrin and haem metabolism
Disorder of porphyrin metabolism[accessedResource: SNOMEDCT:29094004][accessDate: 04-11-2010]
Porphyrinopathy
Disorder of porphyrin and heme metabolism
porphyria
disorder of porphyrin metabolism (disorder)
Disorders of porphyrin metabolism[accessedResource: ICD9:277.1][accessDate: 04-11-2010]
Porphyrias[accessedResource: MSH:D011164][accessDate: 04-11-2010]
Disorder of porphyrin and haem metabolism[accessedResource: SNOMEDCT:29094004][accessDate: 04-11-2010]
James Malone
SNOMEDCT:190916001
Hematoporphyria
A diverse group of metabolic diseases characterized by errors in the biosynthetic pathway of HEME in the LIVER, the BONE MARROW, or both. They are classified by the deficiency of specific enzymes, the tissue site of enzyme defect, or the clinical features that include neurological (acute) or cutaneous (skin lesions). Porphyrias can be hereditary or acquired as a result of toxicity to the hepatic or erythropoietic marrow tissues.[accessedResource: MSH:D011164][accessDate: 04-11-2010]
GeneRIF:16026339
Disorder of porphyrin metabolism
Hematoporphyria[accessedResource: DOID:13268][accessDate: 04-11-2010]
Porphyrinopathy (disorder)
DOID:13268
Disorders of porphyrin metabolism
Disorder of porphyrin metabolism, NOS
James Malone
blood platelet
thrombocyte
thrombocyte[accessedResource: CL:0000233][accessDate: 04-11-2010]
A non-nucleated disk-shaped cell formed by extrusion from megakaryocytes, found in the blood of all mammals, and mainly involved in blood coagulation.[accessedResource: CL:0000233][accessDate: 04-11-2010]
A non-nucleated disk-shaped cell formed by extrusion from megakaryocytes, found in the blood of all mammals, and mainly involved in blood coagulation.
CL:0000233
platelet
blood platelet[accessedResource: CL:0000233][accessDate: 04-11-2010]
James Malone
GM11995
James Malone
basal ganglion
Set of basal ganglia[accessedResource: FMAID:84013][accessDate: 04-11-2010]
NIFSTD:birnlex_826
Set of basal nuclei[accessedResource: FMAID:84013][accessDate: 04-11-2010]
Tomasz Adamusiak
Any of four deeply placed masses of gray matter (as the amygdala) in each cerebral hemisphere. Location: The basal ganglion is located deep within the cerebral hemispheres in the telencephalon region of the brain. It consists of the corpus stratium, subthalamic nucleus and the substantia nigra.[accessedResource: BTO:0000235][accessDate: 04-11-2010]
Basal ganglia[accessedResource: FMAID:84013][accessDate: 04-11-2010]
Subcortical masses of gray matter in the forebrain and midbrain that are richly interconnected and so viewed as a functional system. The nuclei usually included are the caudate nucleus (caudoputamen in rodents), putamen, globus pallidus, substantia nigra (pars compacta and pars reticulata) and the subthalamic nucleus. Some also include the nucleus accumbens and ventral pallidum.
Set of basal ganglia
basal nucleus\]
MA:0000184
Set of basal nuclei
BTO:0000235
basal nucleus[accessedResource: BTO:0000235][accessDate: 04-11-2010]
MAT:0000450
FMAID:84013
Basal ganglia
Any of four deeply placed masses of gray matter (as the amygdala) in each cerebral hemisphere. Location: The basal ganglion is located deep within the cerebral hemispheres in the telencephalon region of the brain. It consists of the corpus stratium, subthalamic nucleus and the substantia nigra.
Basal ganglia set
Basal ganglia set[accessedResource: FMAID:84013][accessDate: 04-11-2010]
The reproductive cell in multicellular organisms.[accessedResource: CL:0000586][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
The reproductive cell in multicellular organisms.
germ cell
CL:0000586
GRO:0005367
The reproductive structure of the anthophyta or angiosperms.[accessedResource: BTO:0000469][accessDate: 04-11-2010]
James Malone
PO:0009046
MAT:0000231
flower[accessedResource: MAT:0000231][accessDate: 04-11-2010]
BTO:0000469
flower structure
The reproductive structure of the anthophyta or angiosperms.
flower
GRO:0005367[accessedResource: BTO:0000469][accessDate: 04-11-2010]
gentamicin
(1R,2S,3S,4R,6S)-4,6-diamino-3-{[3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranosyl]oxy}-2-hydroxycyclohexyl (6x)-2-amino-2,3,4,6,7-pentadeoxy-6-(methylamino)-alpha-D-erythro-heptopyranoside
1403-66-3
3091
34642
C21H43N5O7
wing disc-derived cell-line[accessedResource: FBbt:00005537][accessDate: 04-11-2010]
James Malone
antennal primordium2
FBbt:00005537
wing disc-derived cell-line
Tomasz Adamusiak
neural rod
ZFA:0000133
radicicol
(2Z,4E)-8-chloro-9,11-dihydroxy-14-methyl-1a,14,15,15a-tetrahydro-6H-oxireno[e][2]benzoxacyclotetradecine-6,12(7H)-dione
12772-57-5
22692
42692
C18H17ClO6
James Malone
Jie Zheng
Tomasz Adamusiak
The photoperiod and type (e.g., natural, restricted wavelength) of light exposure.
light
MO_60
InChI=1/C12H9ClF3N3O/c1-17-9-6-18-19(11(20)10(9)13)8-4-2-3-7(5-8)12(14,15)16/h2-6,17H,1H3
Zorial
C12H9ClF3N3O
4-chloro-5-(methylamino)-2-(alpha,alpha,alpha-trifluoro-m-tolyl)-3(2H)-pyridazinone
SAN 9789
InChIKey=NVGOPFQZYCNLDU-UHFFFAOYAZ
Ele Holloway
A pyridazinone that has formula C12H9ClF3N3O.
4-chloro-5-(methylamino)-2-[3-(trifluoromethyl)phenyl]-3(2H)-pyridazinone
CHEBI:50842
http://www.ebi.ac.uk/efo/EFO_0002416
James Malone
norflurazon
4-chloro-5-(methylamino)-2-[3-(trifluoromethyl)phenyl]pyridazin-3(2H)-one
CNC1=C(Cl)C(=O)N(N=C1)c2cccc(c2)C(F)(F)F
Solicam
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#temperature[accessedResource: MO_791][accessDate: 04-11-2010]
Temperature is a physical quality of the thermal energy of a system.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#temperature
MO_791
Tomasz Adamusiak
A physical quality of the thermal energy of a system.
PATO:0000146
Jie Zheng
temperature
A physical quality of the thermal energy of a system.[accessedResource: PATO:0000146][accessDate: 04-11-2010]
James Malone
Fatty Tissue
NCIt:C22703
obsolete_adipose tissue MMHCC
Fatty Tissue[accessedResource: NCIt:C22703][accessDate: 10-05-2010]
Adipose Tissue (MMHCC)[accessedResource: NCIt:C22703][accessDate: 10-05-2010]
Adipose Tissue (MMHCC)
No longer required in EFO (no supporting use case)
true
InChIKey=JBDOSUUXMYMWQH-UHFFFAOYAA
1-Naphthylisothiocyanate
1-naphthyl isothiocyanate
James Malone
InChI=1/C11H7NS/c13-8-12-11-7-3-5-9-4-1-2-6-10(9)11/h1-7H
http://www.ebi.ac.uk/efo/EFO_0001469
1-isothiocyanatonaphthalene
CHEBI:35455
S=C=Nc1cccc2ccccc12
ANIT
alpha-Naphthyl isothiocyanate
Ele Holloway
James Malone
Tomasz Adamusiak
(-)-catechin hydrate
CASRN:18829-70-4
(-)-catechin
A guanidine that has formula C4H11N5.
1,1-Dimethylbiguanide
metformin
InChI=1/C4H11N5/c1-9(2)4(7)8-3(5)6/h1-2H3,(H5,5,6,7,8)/f/h5,7-8H,6H2
C4H11N5
CN(C)C(=N)NC(N)=N
N,N-dimethylimidodicarbonimidic diamide
InChIKey=XZWYZXLIPXDOLR-WXQAPKLBCT
http://www.ebi.ac.uk/efo/EFO_0001570
CHEBI:6801
Tomasz Adamusiak
trophozoite
Jie Zheng
A developmental stage of the Plasmodium life cycle found within the erythrocyte.
A developmental stage of the Plasmodium life cycle found within the erythrocyte.[accessedResource: IDOMAL:0000304][accessDate: 04-11-2010]
trophozoite stage
IDOMAL:0000304
trophozoite stage[accessedResource: IDOMAL:0000304][accessDate: 04-11-2010]
Periodontitis (disorder)
Chronic periodontitis NOS[accessedResource: SNOMEDCT:196369002][accessDate: 04-11-2010]
GeneRIF:15025215
GeneRIF:15845467
Periodontitis, NOS
James Malone
Periodontitis (disorder)[accessedResource: DOID:824][accessDate: 04-11-2010]
chronic pericementitis[accessedResource: DOID:824][accessDate: 04-11-2010]
MSH:D010518
Inflammation and loss of connective tissues supporting or surrounding the teeth. This may involve any part of the PERIODONTIUM. Periodontitis is currently classified by disease progression (CHRONIC PERIODONTITIS; AGGRESSIVE PERIODONTITIS) instead of age of onset. (From 1999 International Workshop for a Classification of Periodontal Diseases and Conditions, American Academy of Periodontology)[accessedResource: MSH:D010518][accessDate: 04-11-2010]
Chronic periodontitis
GeneRIF:16052575
GeneRIF:16018746
Periodontitis, NOS[accessedResource: SNOMEDCT:41565005][accessDate: 04-11-2010]
Periodontitides
Pericementitis[accessedResource: MSH:D010518][accessDate: 04-11-2010]
Chronic pericementitis (disorder)
GeneRIF:12747454
Pericementitides
GeneRIF:15312099
NCIt:C35326
GeneRIF:16208406
GeneRIF:12370398
DOID:824
chronic periodontitis NOS (disorder)
GeneRIF:15491310
Chronic periodontitis NOS
chronic periodontitis (disorder)
GeneRIF:12834496
NCIt:C34918
GeneRIF:14734770
Periodontitides[accessedResource: MSH:D010518][accessDate: 04-11-2010]
GeneRIF:12469211
Chronic periodontitis (disorder)[accessedResource: SNOMEDCT:5689008][accessDate: 04-11-2010]
Pericementitis
SNOMEDCT:41565005
Pericementitides[accessedResource: MSH:D010518][accessDate: 04-11-2010]
chronic Periodontitis[accessedResource: DOID:824][accessDate: 04-11-2010]
chronic periodontitis NOS (disorder)[accessedResource: DOID:824][accessDate: 04-11-2010]
GeneRIF:11846846
periodontitis
ICD9:523.4
SNOMEDCT:196369002
Inflammation and loss of connective tissues supporting or surrounding the teeth. This may involve any part of the PERIODONTIUM. Periodontitis is currently classified by disease progression (CHRONIC PERIODONTITIS; AGGRESSIVE PERIODONTITIS) instead of age of onset. (From 1999 International Workshop for a Classification of Periodontal Diseases and Conditions, American Academy of Periodontology)
GeneRIF:15279649
GeneRIF:15974847
GeneRIF:12795790
Chronic pericementitis (disorder)[accessedResource: SNOMEDCT:196365008][accessDate: 04-11-2010]
SNOMEDCT:5689008
GeneRIF:12759451
GeneRIF:12595898
chronic pericementitis
SNOMEDCT:196365008
CL:0000250
Tomasz Adamusiak
A haploid (1n) spore developing into a female gametophyte in heterosporous plants.
A haploid (1n) spore developing into a female gametophyte in heterosporous plants.[accessedResource: CL:0000250][accessDate: 04-11-2010]
MAT:0000214
PO:0020019
OntologyMappingImporter following MAT:0000214
James Malone
megaspore
SNOMEDCT:2735009
MSH:D018283
Papillary cystadenocarcinoma, NOS
Papillary Cystadenocarcinomas[accessedResource: MSH:D018283][accessDate: 04-11-2010]
[M]Papillary cystadenocarcinoma, NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189687009][accessDate: 04-11-2010]
[M]Papillary cystadenocarcinoma, NOS
[M]Papillary cystadenocarcinoma, NOS (morphologic abnormality)
Papillary cystadenocarcinoma, NOS (morphologic abnormality)[accessedResource: DOID:3110][accessDate: 04-11-2010]
James Malone
[M]Papillary cystadenocarcinoma, NOS[accessedResource: SNOMEDCT:189687009][accessDate: 04-11-2010]
Papillocystic adenocarcinoma
Papillary cystadenocarcinoma, NOS[accessedResource: SNOMEDCT:2735009][accessDate: 04-11-2010]
SNOMEDCT:189687009
Papillary cystadenocarcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:2735009][accessDate: 04-11-2010]
Papillary cystadenocarcinoma, NOS (morphologic abnormality)
An adenocarcinoma in which the tumor elements are arranged as finger-like processes or as a solid spherical nodule projecting from an epithelial surface.[accessedResource: MSH:D018283][accessDate: 04-11-2010]
Papillary cystadenocarcinoma (morphologic abnormality)
A malignant cystic serous or mucinous epithelial neoplasm characterized by the presence of malignant glandular epithelial cells forming papillary structures. Stromal invasion is present.
Cystadenocarcinomas, Papillary
DOID:3110
Papillocystic adenocarcinoma[accessedResource: SNOMEDCT:2735009][accessDate: 04-11-2010]
papillary cystadenocarcinoma
A malignant cystic serous or mucinous epithelial neoplasm characterized by the presence of malignant glandular epithelial cells forming papillary structures. Stromal invasion is present.[accessedResource: NCIt:C3777][accessDate: 04-11-2010]
GeneRIF:12911720
An adenocarcinoma in which the tumor elements are arranged as finger-like processes or as a solid spherical nodule projecting from an epithelial surface.
NCIt:C3777
InChI=1/Si
Tomasz Adamusiak
silicon atom
A carbon group element atom that has formula Si.
http://www.ebi.ac.uk/efo/EFO_0002420
silicium
Ele Holloway
InChIKey=XUIMIQQOPSSXEZ-UHFFFAOYAB
14Si
silicon
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#silicon
Jie Zheng
Si
silicio
MO_382
James Malone
Silizium
A carbon group element that has formula Si.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#silicon[accessedResource: MO_382][accessDate: 04-11-2010]
scopolamine methyl bromide
James Malone
STRUCTURE_ChemicalName_IUPAC:(1R,2R,4S,5S,7S)-7-{[(2S)-3-hydroxy-2-phenylpropanoyl]oxy}-9,9-dimethyl-3-oxa-9-azoniatricyclo[3.3.1.02,4]nonane bromidebromide
Ele Holloway
CASRN:155-41-9
STRUCTURE_Formula:C18H24BrNO4
Tomasz Adamusiak
DSSTox_CID:20608
DSSTox_Generic_SID:40608
Normal Human Astrocytes
NHA
James Malone
NHA is a cell line derived from normal (healthy) human astrocyte cells.
James Malone
http://www.ebi.ac.uk/efo/EFO_0002639
Danio rerio
zebrafish
murine neuroblastoma cholinergic cell line
Tomasz Adamusiak
presumptive paraxial mesoderm
ZFA:0000591
4-[5-(4-methylphenyl)-3-(trifluoromethyl)-1H-pyrazol-1-yl]benzenesulfonamide
A pyrazole that has formula C17H14F3N3O2S.
http://www.ebi.ac.uk/efo/EFO_0001501
C17H14F3N3O2S
InChI=1/C17H14F3N3O2S/c1-11-2-4-12(5-3-11)15-10-16(17(18,19)20)22-23(15)13-6-8-14(9-7-13)26(21,24)25/h2-10H,1H3,(H2,21,24,25)/f/h21H2
celecoxib
Celebrex (TN)
p-(5-p-Tolyl-3-(trifluoromethyl)pyrazol-1-yl)benzenesulfonamide
CHEBI:41423
InChIKey=RZEKVGVHFLEQIL-QVUQFMIFCW
Cc1ccc(cc1)-c1cc(nn1-c1ccc(cc1)S(N)(=O)=O)C(F)(F)F
James Malone
James Malone
Other psoriasis and similar disorders (disorder)[accessedResource: SNOMEDCT:200996000][accessDate: 04-11-2010]
ICD9:696.1
PITYRIASIS NEC & NOS[accessedResource: ICD9:696.5][accessDate: 04-11-2010]
Other psoriasis and similar disorders
SNOMEDCT:200996000
psoriasis
Other psoriasis and similar disorders[accessedResource: ICD9:696.8][accessDate: 04-11-2010]
SNOMEDCT:200997009
Other and unspecified pityriasis[accessedResource: ICD9:696.5][accessDate: 04-11-2010]
Other psoriasis and similar disorders excluding psoriatic arthropathy
OTHER PSORIASIS
Psoriasis and similar disorders NOS (disorder)[accessedResource: SNOMEDCT:200997009][accessDate: 04-11-2010]
SNOMEDCT:200955003
Psoriasis and similar disorders (disorder)
Other and unspecified pityriasis
PSORIAS RELATED DIS NEC[accessedResource: ICD9:696.8][accessDate: 04-11-2010]
ICD9:696
Psoriasis and similar disorders NOS[accessedResource: SNOMEDCT:200997009][accessDate: 04-11-2010]
OTHER PSORIASIS[accessedResource: ICD9:696.1][accessDate: 04-11-2010]
Other psoriasis and similar disorders excluding psoriatic arthropathy[accessedResource: ICD9:696.1][accessDate: 04-11-2010]
ICD9:696.5
Psoriasis and similar disorders
DOID:8893
Other psoriasis and similar disorders (disorder)
ICD9:696.8
Psoriasis and similar disorders NOS (disorder)
Psoriasis and similar disorders (disorder)[accessedResource: SNOMEDCT:200955003][accessDate: 04-11-2010]
Psoriasis and similar disorders[accessedResource: ICD9:696][accessDate: 04-11-2010]
Psoriasis and similar disorders (navigational concept)
Psoriasis and similar disorders (navigational concept)[accessedResource: SNOMEDCT:200955003][accessDate: 04-11-2010]
PITYRIASIS NEC & NOS
PSORIAS RELATED DIS NEC
Psoriasis and similar disorders NOS
Ele Holloway
James Malone
L428
nonylphenol
STRUCTURE_Formula:4-nonylphenol
DSSTox_Generic_SID:C15H24O
DSSTox_CID:21857
Ele Holloway
CASRN:25154-52-3
James Malone
Tomasz Adamusiak
James Malone
embryonic central brain glia
FBbt:00005663
EMAPA:16542
olfactory system[accessedResource: TAO:0001149][accessDate: 04-11-2010]
Nose[accessedResource: FMAID:46472][accessDate: 04-11-2010]
olfactory system
XAO:0000201
EHDAA:1502
EV:0100037
chemosensory sensory organ[accessedResource: FBbt:00005157][accessDate: 04-11-2010]
FMAID:46472
Any sense organ (FBbt:00005155) that functions in (some) detection of chemical stimulus involved in sensory perception (GO:0050907).[accessedResource: FBbt:00005157][accessDate: 04-11-2010]
SAEL:72
*Subdivision of face which consists of the nasal skeleton, nasal septum and nasal cavity.
MA:0000281
BTO:0000840
chemosensory sensory organ
1a: The part of the face that bears the nostrils and covers the anterior part of the nasal cavity; broadly: this part together with the nasal cavity.nb: The anterior part of the head at the top or end of the muzzle: snout, proboscis.n2. The vertebrate olfactory organ.[accessedResource: BTO:0000840][accessDate: 04-11-2010]
AAO:0000334
XAO:0003033
MFO:0003640
James Malone
Any sense organ (FBbt:00005155) that functions in (some) detection of chemical stimulus involved in sensory perception (GO:0050907).
nose structure
FBbt:00005157
ZFA:0001149
TAO:0001149
1a: The part of the face that bears the nostrils and covers the anterior part of the nasal cavity; broadly: this part together with the nasal cavity.nb: The anterior part of the head at the top or end of the muzzle: snout, proboscis.n2. The vertebrate olfactory organ.
Any sense organ (FBbt:00005155) that has function 'detection of chemical stimulus involved in sensory perception (GO:0050907)'.
nose
Tibialis anterior[accessedResource: FMA:22532][accessDate: 04-11-2010]
James Malone
tibialis anterior muscle
FMA:22532
Tibialis anterior
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#IU[accessedResource: MO_1011][accessDate: 04-11-2010]
James Malone
International Unit
MO_1011
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#International_Unit_of_Biological_Activity
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#IU
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#nm
http://www.ebi.ac.uk/efo/EFO_0001812
true
nanomolar
A unit of molarity which is equal to one thousandth of one millionth of a molar or 10^[-9] M.
MO_862
James Malone
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#nm[accessedResource: MO_862][accessDate: 04-11-2010]
Tomasz Adamusiak
nM
BTO:0000408
epididymus
EMAPA:19290
EV:0100103
SAEL:36
Epididymis
A system of ductules emerging posteriorly from the testis that holds sperm during maturation and that forms a tangled mass before uniting into a single coiled duct which is continuous with the vas deferens.
FMAID:18255
Epididymis[accessedResource: FMAID:18255][accessDate: 04-11-2010]
A system of ductules emerging posteriorly from the testis that holds sperm during maturation and that forms a tangled mass before uniting into a single coiled duct which is continuous with the vas deferens.[accessedResource: BTO:0000408][accessDate: 04-11-2010]
James Malone
MA:0000397
MAT:0000130
obsolete - duplication with T cell acute lymphoblastic
leukemia EFO_0000209 use this instead
James Malone
true
1.5
obsolete_precursor T lymphoblastic leukemia
Anna Farne
An assay in which the transcriptome of a biological sample is analysed by reverse transcription PCR (RT-PCR)
transcription profiling by RT-PCR
A cell that specializes in controlled release of one or more substances.[accessedResource: CL:0000151][accessDate: 04-11-2010]
Tomasz Adamusiak
A cell that specializes in controlled release of one or more substances.
secretory cell
CL:0000151
Ele Holloway
James Malone
SW1417
Ele Holloway
James Malone
Tomasz Adamusiak
butein
CASRN:487-52-5
Tomasz Adamusiak
tooth 3V
ZFA:0001145
Conjunctiva[accessedResource: NCIt:C12341][accessDate: 04-11-2010]
Conjunctiva
James Malone
A thin, transparent tissue divided into the palpebral conjunctiva (covering the inner side of the eye lid) and the bulbar conjunctiva (covering the eyeball).
A thin, transparent tissue divided into the palpebral conjunctiva (covering the inner side of the eye lid) and the bulbar conjunctiva (covering the eyeball).[accessedResource: NCIt:C12341][accessDate: 04-11-2010]
conjunctiva structure
NCIt:C12341
STRUCTURE_ChemicalName_IUPAC:9,10-dimethoxy-3-(2-methylpropyl)-1,3,4,6,7,11b-hexahydro-2H-pyrido[2,1-a]isoquinolin-2-one
Ele Holloway
DSSTox_Generic_SID:42614
STRUCTURE_Formula:C19H27NO3
CASRN:58-46-8
DSSTox_CID:22614
Tomasz Adamusiak
tetrabenazine
James Malone
C21H28O5
InChIKey=OIGNJSKKLXVSLS-VWUMJDOOBF
hydroretrocortine
1,4-pregnadiene-11beta,17alpha,21-triol-3,20-dione
CHEBI:8378
3,20-dioxo-11beta,17alpha,21-trihydroxy-1,4-pregnadiene
Delta(1)-dehydrocortisol
InChI=1/C21H28O5/c1-19-7-5-13(23)9-12(19)3-4-14-15-6-8-21(26,17(25)11-22)20(15,2)10-16(24)18(14)19/h5,7,9,14-16,18,22,24,26H,3-4,6,8,10-11H2,1-2H3/t14-,15-,16-,18+,19-,20-,21-/m0/s1
A glucocorticoid that has formula C21H28O5.
Delta(1)-hydrocortisone
http://www.ebi.ac.uk/efo/EFO_0001595
Delta(1)-dehydrohydrocortisone
metacortandralone
[H][C@@]12CCC3=CC(=O)C=C[C@]3(C)[C@@]1([H])[C@@H](O)C[C@@]1(C)[C@@]2([H])CC[C@]1(O)C(=O)CO
11beta,17,21-trihydroxypregna-1,4-diene-3,20-dione
prednisolone
(11beta)-11,17,21-trihydroxypregna-1,4-diene-3,20-dione
Calu1
James Malone
Ele Holloway
Calu-1
aflatoxin B1
1162-65-8
20035
35
4-(methyloxy)-2,3,6a,9a-tetrahydrocyclopenta[c]furo[3',2':4,5]furo[2,3-h]chromene-1,11-dione
C17H12O6
AFB1
soleus[accessedResource: BTO:0001265][accessDate: 04-11-2010]
soleus muscle
soleus
A broad flat muscle of the calf of the leg lying immediately below the gastrocnemius.
BTO:0001265
A broad flat muscle of the calf of the leg lying immediately below the gastrocnemius.[accessedResource: BTO:0001265][accessDate: 04-11-2010]
James Malone
James Malone
blastula 256-cell
ZFS:0000009
James Malone
pharyngula prim-5
ZFS:0000029
mid intestine[accessedResource: MAT:0000047][accessDate: 04-11-2010]
intestinum tenue[accessedResource: BTO:0000651][accessDate: 04-11-2010]
EV:0100072
mid intestine
anterior intestine[accessedResource: MAT:0000047][accessDate: 04-11-2010]
anterior intestine
The part of the intestine that lies between the stomach and colon, consists of duodenum, jejunum, and ileum, secretes digestive enzymes, and is the chief site of the absorption of digested nutrients. The proximal portion of the intestine.[accessedResource: BTO:0000651][accessDate: 04-11-2010]
The anterior intestine is a rather narrow looped tube of the adult hindgut.
MAT:0000047
intestinum tenue
The anterior intestine is a rather narrow looped tube of the adult hindgut.[accessedResource: TGMA:0001024][accessDate: 04-11-2010]
SAEL:96
MA:0000337
James Malone
BTO:0000651
adult anterior intestine[accessedResource: TGMA:0001024][accessDate: 04-11-2010]
The part of the intestine that lies between the stomach and colon, consists of duodenum, jejunum, and ileum, secretes digestive enzymes, and is the chief site of the absorption of digested nutrients. The proximal portion of the intestine.
The terminal region of the mid intestine is comprised of specialized enterocytes that appear to play a role in mucosal immunity.
Rectum
XAO:0000130
TGMA:0001024
ZFA:0001323
The terminal region of the mid intestine is comprised of specialized enterocytes that appear to play a role in mucosal immunity.[accessedResource: ZFA:0001323][accessDate: 04-11-2010]
adult anterior intestine
Rectum[accessedResource: FMAID:14544][accessDate: 04-11-2010]
FMAID:14544
small intestine
Adenoma of the Liver Cells[accessedResource: NCIt:C3758][accessDate: 04-11-2010]
A benign epithelial neoplasm arising from the hepatocytes. Grossly, it appears as a soft, round mass which often contains areas of hemorrhage and necrosis. Morphologically, the neoplastic cells resemble normal hepatocytes and form plates separated by sinusoids. Most patients have a history of contraceptive or anabolic steroids use.
Liver Cell Adenoma
A benign epithelial neoplasm arising from the hepatocytes. Grossly, it appears as a soft, round mass which often contains areas of hemorrhage and necrosis. Morphologically, the neoplastic cells resemble normal hepatocytes and form plates separated by sinusoids. Most patients have a history of contraceptive or anabolic steroids use.[accessedResource: NCIt:C3758][accessDate: 04-11-2010]
Adenoma of Liver Cells
James Malone
HCA[accessedResource: NCIt:C3758][accessDate: 04-11-2010]
HCA
Liver Cell Adenoma[accessedResource: NCIt:C3758][accessDate: 04-11-2010]
hepatocellular adenoma
Adenoma of the Liver Cells
NCIt:C3758
Adenoma of Liver Cells[accessedResource: NCIt:C3758][accessDate: 04-11-2010]
James Malone
CS57905 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158929&type=germplasm
CS57905
http://www.arabidopsis.org/servlets/TairObject?id=1005158929&type=germplasm
Tomasz Adamusiak
heart transplant rejection
MedDRA:10019315
James Malone
Ele Holloway
HCC1395
Tomasz Adamusiak
paraxial mesoderm
ZFA:0000255
James Malone
ZEA:0015151
MAT:0000224
apical shoot meristem
PO:0020148
OntologyMappingImporter following MAT:0000224
Tomasz Adamusiak
embryonic hypocerebral ganglion
FBbt:00005669
Ele Holloway
James Malone
SW1990
Ele Holloway
James Malone
NCI-H748
LHSR is a cell line in which human prostate epithelial cells (PrEC) were infected with amphotropic retroviruses encoding the SV40 large T antigen (L), the telomerase catalytic subunit hTERT (H), the SV40 small T antigen (S) and an oncogenic allele of H-ras (R) to create LHSR cells.
James Malone
LHSR
Ele Holloway
O=C1NC(=O)c2cc(Nc3ccccc3)c(Nc3ccccc3)cc12
DAPH
InChI=1/C20H15N3O2/c24-19-15-11-17(21-13-7-3-1-4-8-13)18(12-16(15)20(25)23-19)22-14-9-5-2-6-10-14/h1-12,21-22H,(H,23,24,25)/f/h23H
InChIKey=AAALVYBICLMAMA-MPIMZMORCI
CHEBI:53110
Phthalimide substituted at the 4- and 5-positions by anilino groups.
DAPH1
Cgp 52411
4,5-dianilinophthalimide
James Malone
5,6-bis(phenylamino)-1H-isoindole-1,3(2H)-dione
http://www.ebi.ac.uk/efo/EFO_0002487
C20H15N3O2
Caused by mutations of gene ERCC6.[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Cockayne syndrome (disorder)
GeneRIF:15082767
A simple genetic disease that is caused by a rare autosomal recessive mutations in two DNA excision repair proteins, ERCC-8 and ERCC-6, and characterized by growth failure, impaired development of the nervous system, abnormal sensitivity to sunlight (photosensitivity), and premature aging.
A syndrome characterized by multiple system abnormalities including DWARFISM; PHOTOSENSITIVITY DISORDERS; PREMATURE AGING; and HEARING LOSS. It is caused by mutations of a number of autosomal recessive genes encoding proteins that involve transcriptional-coupled DNA REPAIR processes. Cockayne syndrome is classified by the severity and age of onset. Type I (classical; CSA) is early childhood onset in the second year of life; type II (congenital; CSB) is early onset at birth with severe symptoms; type III (xeroderma pigmentosum; XP) is late childhood onset with mild symptoms.[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Type C Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 04-11-2010]
cockayne syndrome
Cockayne Syndrome, Type B
Progeria-Like Syndrome
Type III Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Cokayne syndrome
Cockayne Syndrome, Group A
Cockayne Syndrome, Type I[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Caused by mutations of gene CKN1.
Progeria-Like Syndromes[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Dwarfism-retinal atrophy-deafness syndrome
Cockayne Syndrome, Type III
Group C Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Type C is a rare form. Its genetic defect is not clear; appears to be a heterogeneous group. OMIM suggests that Type C should not be used anymore.[accessedResource: MSH:D003057][accessDate: 04-11-2010]
DOID:2962
SNOMEDCT:21086008
James Malone
Cockayne Syndrome, Type A[accessedResource: MSH:D003057][accessDate: 04-11-2010]
GeneRIF:11809892
Caused by mutations of gene CKN1.[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Progeria-Like Syndromes
Group A Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Type II Cockayne Syndrome
Dwarfism-retinal atrophy-deafness syndrome[accessedResource: SNOMEDCT:21086008][accessDate: 04-11-2010]
An autosomal recessive syndrome caused by mutations in the ERCC8 and ERCC6 genes. It is characterized by growth and developmental delay, vision and hearing impairment, and impairment of the peripheral nervous system function.
Cockayne syndrome (disorder)[accessedResource: SNOMEDCT:21086008][accessDate: 04-11-2010]
An autosomal recessive syndrome caused by mutations in the ERCC8 and ERCC6 genes. It is characterized by growth and developmental delay, vision and hearing impairment, and impairment of the peripheral nervous system function.[accessedResource: NCIt:C9460][accessDate: 04-11-2010]
Type II Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Type B Cockayne Syndrome[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Syndrome, Progeria-Like[accessedResource: MSH:D003057][accessDate: 04-11-2010]
A simple genetic disease that is caused by a rare autosomal recessive mutations in two DNA excision repair proteins, ERCC-8 and ERCC-6, and characterized by growth failure, impaired development of the nervous system, abnormal sensitivity to sunlight (photosensitivity), and premature aging.[accessedResource: DOID:2962][accessDate: 04-11-2010]
GeneRIF:12748643
A syndrome characterized by multiple system abnormalities including DWARFISM; PHOTOSENSITIVITY DISORDERS; PREMATURE AGING; and HEARING LOSS. It is caused by mutations of a number of autosomal recessive genes encoding proteins that involve transcriptional-coupled DNA REPAIR processes. Cockayne syndrome is classified by the severity and age of onset. Type I (classical; CSA) is early childhood onset in the second year of life; type II (congenital; CSB) is early onset at birth with severe symptoms; type III (xeroderma pigmentosum; XP) is late childhood onset with mild symptoms.
Caused by mutations of gene ERCC6.
Cockayne Syndrome, Group B[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Cockayne Syndrome, Type I
Cockayne Syndrome, Type C
MSH:D003057
NCIt:C9460
Group B Cockayne Syndrome
Cockayne's syndrome
GeneRIF:16246722
Cockayne Syndrome, Group C
Cockayne Syndrome Type 3[accessedResource: MSH:D003057][accessDate: 04-11-2010]
Cockayne Syndrome, Type A
Cockayne Syndrome Type 3
GeneRIF:12095617
Cokayne syndrome[accessedResource: DOID:2962][accessDate: 04-11-2010]
Type C is a rare form. Its genetic defect is not clear; appears to be a heterogeneous group. OMIM suggests that Type C should not be used anymore.
Cockayne's syndrome[accessedResource: DOID:2962][accessDate: 04-11-2010]
parasitemia[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitic skin infestation (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
parasitic infectious disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
A disease by infectious agent that is carried out by parasite which by definition is a pathogen that simultaneously injures and derives sustenance from its host.
parasitic skin disorder
DOID:1398
Parasitism[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Parasitism, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
parasitic intestinal infectious disease
intestinal parasitism (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
GeneRIF:12045244
Parasitic infestation of orbit (disorder)
Ectoparasitic disease
Parasitic endophthalmitis NOS (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
intestinal parasitism, unspecified (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
Infestation
parasitic animal
parasitic liver disorder
parasitic lung infectious disease
parasitic liver disorder[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitosis, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
psorospermiasis
Disease, Parasitic
Parasitic infectious disease, NOS
intestinal parasitism, unspecified
parasitic eye infection
intestinal parasitism (disorder)
intestinal parasitism NOS (disorder)
parasitic endophthalmitis
PARASITIC DIS
NCIt:C27864
parasitic gastrointestinal disorder[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitic Diseases[accessedResource: MSH:D010272][accessDate: 04-11-2010]
intestinal parasitism NOS (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
parasitic pregnancy complication[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitic disease, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
animal parasitic infectious disease
Parasitic endophthalmitis NOS[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitism, NOS
Parasite infestation[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Parasitic infestation of orbit (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
GeneRIF:11444968
Infections or infestations with parasitic organisms. They are often contracted through contact with an intermediate vector, but may occur as the result of direct exposure.[accessedResource: MSH:D010272][accessDate: 04-11-2010]
parasitic endophthalmitis[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitic skin infestation (disorder)
parasitic skin disorder[accessedResource: DOID:1398][accessDate: 04-11-2010]
skin Infestation NOS
parasitic intestinal infectious disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
A systemic infectious disease that is carried out by a parasite which by definition is a pathogen that simultaneously injures and derives sustenance from its host.
Parasitic endophthalmitis (disorder)
Parasitism
Parasitic infection of skin[accessedResource: DOID:1398][accessDate: 04-11-2010]
parasitic eye infectious disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitic infectious disease of the central nervous system (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
parasitic Infection
Parasitosis[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Parasite infestation
A successful invasion of a host by an organism that uses the host for food and shelter.[accessedResource: NCIt:C27864][accessDate: 04-11-2010]
intestinal parasitism, unspecified (disorder)
parasitic infestation of orbit
Disease caused by parasite, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Parasitic infection, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Disease caused by parasite, NOS
Parasitic disease, NOS
intestinal parasitism, unspecified[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasite infestation, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
PARASITIC DIS[accessedResource: MSH:D010272][accessDate: 04-11-2010]
James Malone
Parasitic infection, NOS
Disease caused by parasite (disorder)
Parasitosis, NOS
Parasitosis
parasitic infestation of orbit[accessedResource: DOID:1398][accessDate: 04-11-2010]
MSH:D010272
Parasitic infection of lung
Psorospermiasis (disorder)
Infestation, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Parasitic infection of skin
Parasitic eye infection (disorder)
psorospermiasis[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasite infestation, NOS
central nervous system parasitic infectious disease
Parasitic endophthalmitis (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
A successful invasion of a host by an organism that uses the host for food and shelter.
Parasitic Diseases
parasitemia
Parasitic eye infection (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
parasitic skin infectious disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
Disease caused by parasite
Infections or infestations with parasitic organisms. They are often contracted through contact with an intermediate vector, but may occur as the result of direct exposure.
SNOMEDCT:17322007
parasitic pregnancy complication
skin Infestation NOS[accessedResource: DOID:1398][accessDate: 04-11-2010]
Infestation[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
parasitic infectious disease
parasitic eye infectious disease
parasitic animal[accessedResource: DOID:1398][accessDate: 04-11-2010]
animal parasitic infectious disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
Disease caused by parasite (disorder)[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Ectoparasitic disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitic endophthalmitis NOS
parasitic liver infectious disease
Parasitic infection of lung[accessedResource: DOID:1398][accessDate: 04-11-2010]
Parasitic infectious disease of the central nervous system (disorder)
parasitic gastrointestinal disorder
Disease caused by parasite[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Psorospermiasis (disorder)[accessedResource: DOID:1398][accessDate: 04-11-2010]
parasitic eye infection[accessedResource: DOID:1398][accessDate: 04-11-2010]
central nervous system parasitic infectious disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
GeneRIF:15471863
parasitic lung infectious disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
parasitic skin infectious disease
A systemic infectious disease that is carried out by a parasite which by definition is a pathogen that simultaneously injures and derives sustenance from its host.[accessedResource: DOID:1398][accessDate: 04-11-2010]
Infestation, NOS
Disease, Parasitic[accessedResource: MSH:D010272][accessDate: 04-11-2010]
Parasitic infectious disease, NOS[accessedResource: SNOMEDCT:17322007][accessDate: 04-11-2010]
Parasitic endophthalmitis NOS (disorder)
parasitic liver infectious disease[accessedResource: DOID:1398][accessDate: 04-11-2010]
James Malone
larval day 4
ZFS:0000036
TAO:0001149
FMA:7190
ZFA:0001149
XAO:0003196
olfactory system
chemosensory sensory organ
MA:0002445
James Malone
MDAMB436
1.8
NCIt:C4817
GeneRIF:12527902
GeneRIF:15282325
ES[accessedResource: NCIt:C4817][accessDate: 10-05-2010]
Ewing's Sarcoma/Peripheral Primitive Neuroectodermal Tumor[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
DOID:3369
GeneRIF:15044653
Tumor, Ewing's[accessedResource: MSH:D012512][accessDate: 10-05-2010]
Ewing's tumour
SNOMEDCT:76909002
Ewing Tumor
GeneRIF:11956622
GeneRIF:12700668
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms.[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
duplicate of EFO_0000174 Ewing's sarcoma
A malignant tumor of the bone which always arises in the medullary tissue, occurring more often in cylindrical bones. There are conspicuous foci of necrosis in association with irregular masses of small, regular, rounded or ovoid cells with very scanty cytoplasm. The tumor occurs usually before the age of 20, about twice as frequently in males as in females. (From Dorland, 27th ed; Stedman, 25th ed)[accessedResource: MSH:D012512][accessDate: 10-05-2010]
ES
Ewings sarcoma[accessedResource: DOID:3369][accessDate: 10-05-2010]
Ewing Sarcoma/Peripheral Primitive Neuroectodermal Tumor
Ewings Tumor
GeneRIF:15919668
James Malone
Ewing Family of Tumors
GeneRIF:15581626
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms. -- 2004
Ewing Family of Tumors[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
A small round cell tumor that lacks morphologic, immunohistochemical, and electron microscopic evidence of neuroectodermal differentiation. It represents one of the two ends of the spectrum called Ewing's sarcoma/peripheral neuroectodermal tumor. It affects mostly males under age 20, and it can occur in soft tissue or bone. Pain and the presence of a mass are the most common clinical symptoms.
GeneRIF:12447693
Ewing's Family of Tumors[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
Ewing Sarcoma/Peripheral Primitive Neuroectodermal Tumor[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms.
GeneRIF:14977835
Ewing's Sarcoma/Peripheral Primitive Neuroectodermal Tumor
NCIt:C27291
GeneRIF:14528100
GeneRIF:12172985
Tumors of the Ewing's Family[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
obsolete_Ewing family tumor
Ewing's tumour[accessedResource: SNOMEDCT:76909002][accessDate: 10-05-2010]
A small round cell tumor that lacks morphologic, immunohistochemical, and electron microscopic evidence of neuroectodermal differentiation. It represents one of the two ends of the spectrum called Ewing's sarcoma/peripheral neuroectodermal tumor. It affects mostly males under age 20, and it can occur in soft tissue or bone. Pain and the presence of a mass are the most common clinical symptoms.[accessedResource: NCIt:C4817][accessDate: 10-05-2010]
Ewing's sarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:76909002][accessDate: 10-05-2010]
GeneRIF:12557222
Ewing Tumor[accessedResource: MSH:D012512][accessDate: 10-05-2010]
Sarcoma, Ewing[accessedResource: MSH:D012512][accessDate: 10-05-2010]
Tumors of the Ewing's Family
Ewing's sarcoma
Ewing's Family of Tumours[accessedResource: NCIt:C27291][accessDate: 10-05-2010]
GeneRIF:15273724
GeneRIF:11313995
GeneRIF:12054564
MSH:D012512
A malignant tumor of the bone which always arises in the medullary tissue, occurring more often in cylindrical bones. There are conspicuous foci of necrosis in association with irregular masses of small, regular, rounded or ovoid cells with very scanty cytoplasm. The tumor occurs usually before the age of 20, about twice as frequently in males as in females. (From Dorland, 27th ed; Stedman, 25th ed)
true
GeneRIF:15310753
Ewing's sarcoma (morphologic abnormality)
GeneRIF:15748890
GeneRIF:15328192
GeneRIF:15077162
GeneRIF:11992404
Sarcoma, Ewing
Ewing's Family of Tumors
Ewing's Family of Tumours
James Malone
hindlimb muscle
AAO:0000222
MA:0000663
James Malone
3T3-L1
Tomasz Adamusiak
facial ganglion
ZFA:0001291
James Malone
Other specified anthrax manifestations[accessedResource: SNOMEDCT:186303000][accessDate: 04-11-2010]
SNOMEDCT:186303000
Anthrax, unspecified[accessedResource: ICD9:022.9][accessDate: 04-11-2010]
GeneRIF:16194238
[X]Anthrax, unspecified[accessedResource: SNOMEDCT:187302001][accessDate: 04-11-2010]
GeneRIF:16239556
Other specified anthrax manifestations
Anthrax NOS (disorder)[accessedResource: SNOMEDCT:186304006][accessDate: 04-11-2010]
OTHER ANTHRAX MANIFEST
SNOMEDCT:187302001
GeneRIF:15689409
A Bacillaceae infectious disease that results_in infection located_in skin, located_in lung or located_in gastrointestinal tract, has_agent Bacillus anthracis, transmitted_by contact with infected animals or animal products, transmitted_by airborne spores or transmitted_by ingestion of undercooked meat from infected animals and has_symptom skin ulcer, has_symptom nausea, has_symptom poor appetite, has_symptom bloody diarrhea, has_symptom fever or has_symptom shortness of breath.[accessedResource: DOID:7427][accessDate: 04-11-2010]
Infection due to Bacillus anthracis
ICD9:022
OTHER ANTHRAX MANIFEST[accessedResource: ICD9:022.8][accessDate: 04-11-2010]
Splenic fever
Anthrax NOS (disorder)
Charbon[accessedResource: SNOMEDCT:409498004][accessDate: 04-11-2010]
Anthrax NOS
ICD9:022.9
[X]Anthrax, unspecified (disorder)[accessedResource: SNOMEDCT:187302001][accessDate: 04-11-2010]
Charbon
DOID:7427
Milzbrand[accessedResource: SNOMEDCT:409498004][accessDate: 04-11-2010]
Milzbrand
SNOMEDCT:186304006
Other specified manifestations of anthrax
[X]Anthrax, unspecified
Infection due to Bacillus anthracis[accessedResource: SNOMEDCT:409498004][accessDate: 04-11-2010]
Other specified manifestations of anthrax[accessedResource: ICD9:022.8][accessDate: 04-11-2010]
SNOMEDCT:409498004
Anthrax, unspecified
GeneRIF:15569923
anthrax disease[accessedResource: DOID:7427][accessDate: 04-11-2010]
ICD9:022.8
anthrax
anthrax disease
Other specified anthrax manifestations (disorder)
Anthrax (disorder)
Splenic fever[accessedResource: SNOMEDCT:409498004][accessDate: 04-11-2010]
A Bacillaceae infectious disease that results_in infection located_in skin, located_in lung or located_in gastrointestinal tract, has_agent Bacillus anthracis, transmitted_by contact with infected animals or animal products, transmitted_by airborne spores or transmitted_by ingestion of undercooked meat from infected animals and has_symptom skin ulcer, has_symptom nausea, has_symptom poor appetite, has_symptom bloody diarrhea, has_symptom fever or has_symptom shortness of breath.
[X]Anthrax, unspecified (disorder)
Anthrax (disorder)[accessedResource: SNOMEDCT:409498004][accessDate: 04-11-2010]
ANTHRAX NOS[accessedResource: ICD9:022.9][accessDate: 04-11-2010]
Other specified anthrax manifestations (disorder)[accessedResource: SNOMEDCT:186303000][accessDate: 04-11-2010]
The upper arm bone between the shoulder and elbow.[accessedResource: NCIt:C12731][accessDate: 04-11-2010]
James Malone
The upper arm bone between the shoulder and elbow.
humerus
NCIt:C12731
Ele Holloway
James Malone
SW1088
erythro-9-(2-hydroxy-3-nonyl)adenine hydrochloride
DSSTox_CID:20473
Tomasz Adamusiak
DSSTox_Generic_SID:40473
CASRN:58337-38-5
Ele Holloway
EHNA hydrochloride
STRUCTURE_Formula:C14H24ClN5O
James Malone
STRUCTURE_ChemicalName_IUPAC:(2R,3S)-3-(6-amino-9H-purin-9-yl)nonan-2-ol hydrochloride
Ele Holloway
James Malone
UMC11
James Malone
adult foregut precursor
FBbt:00005611
Ele Holloway
James Malone
Tomasz Adamusiak
anti-CD3
DSSTox_Generic_SID:44052
Tomasz Adamusiak
tooth 4V
ZFA:0001143
axial fin skeleton[accessedResource: ZFA:0001123][accessDate: 04-11-2010]
MAT:0000277
axial fin skeleton
ZFA:0001123
James Malone
median fin skeleton
unpaired fin skeleton
OntologyMappingImporter following MAT:0000277
unpaired fin skeleton[accessedResource: ZFA:0001123][accessDate: 04-11-2010]
James Malone
Tomasz Adamusiak
basal breast tumor is a high grade, triple-negative breast tumor, i.e. they express no estrogen receptor, progesterone receptor nor Her2/neu proteins.
basal-like carcinoma
wikipedia:http://en.wikipedia.org/wiki/Basal-like_carcinoma
CASRN:67287-95-0
DSSTox_CID:22629
James Malone
STRUCTURE_Formula:C18H21BrClNO2
DSSTox_Generic_SID:42629
STRUCTURE_ChemicalName_IUPAC:6-chloro-3-methyl-1-(3-methylphenyl)-2,3,4,5-tetrahydro-1H-3-benzazepine-7,8-diol hydrobromide
SKF 83959 hydrobromide
Ele Holloway
Tomasz Adamusiak
alpha-tocopherol
10191-41-0
Ele Holloway
James Malone
true
2.2
duplicate of EFO_0002859
obsolete_SKNAS
Ele Holloway
James Malone
CORL88
Ele Holloway
James Malone
RKOE6
FBdv:00005304
WBIs:0000005
James Malone
XAO:1000003
blastula stage
blastoderm stage
EVM:2990005
blastula embryo
James Malone
A human cell line derived from a pediatric patient initially classified as Wilm's tumor, reclassified as deriving from a rhabdoid tumor of the kidney
Ele Holloway
G401
G-401
A division of the perianth of a flower having a virtually indistinguishable calyx and corolla, as in tulips and lilies.[accessedResource: BTO:0001728][accessDate: 04-11-2010]
tepal
PO:0009033
GRO:0005131
A division of the perianth of a flower having a virtually indistinguishable calyx and corolla, as in tulips and lilies.
MAT:0000356
BTO:0001728
James Malone
GRO:0005131[accessedResource: BTO:0001728][accessDate: 04-11-2010]
chlorpropamide
94-20-2
4-chloro-N-(propylcarbamoyl)benzenesulfonamide
carbon
7440-44-0
SALIVARY GLAND VIRUS DIS[accessedResource: MSH:D003586][accessDate: 04-11-2010]
ICD9:078.5
Salivary Gland Virus Disease[accessedResource: MSH:D003586][accessDate: 04-11-2010]
Cytomegaloviral disease, unspecified
Cytomegalovirus infection (disorder)
INFECT CYTOMEGALOVIRUS
Cytomegaloviral disease, unspecified (disorder)[accessedResource: DOID:11259][accessDate: 04-11-2010]
SALIVARY GLAND VIRUS DIS
Disease, Cytomegalic Inclusion[accessedResource: MSH:D003586][accessDate: 04-11-2010]
CYTOMEGALOVIRAL DISEASE
Cytomegalovirus infection[accessedResource: SNOMEDCT:28944009][accessDate: 04-11-2010]
Salivary gland virus disease
GeneRIF:15890971
GeneRIF:15452223
Disease, Cytomegalic Inclusion
INCLUSION DIS[accessedResource: MSH:D003586][accessDate: 04-11-2010]
Cytomegaloviral disease, unspecified (disorder)
GeneRIF:12388817
GeneRIF:15021824
Disease due to Cytomegalovirus
Cytomegalovirus Infection
CYTOMEGALIC INCLUSION DIS[accessedResource: MSH:D003586][accessDate: 04-11-2010]
GeneRIF:14990723
[X]Cytomegaloviral disease, unspecified (disorder)
Infections, Cytomegalovirus[accessedResource: MSH:D003586][accessDate: 04-11-2010]
[X]Cytomegaloviral disease, unspecified
GeneRIF:15194307
Infection with CYTOMEGALOVIRUS, characterized by enlarged cells bearing intranuclear inclusions. Infection may be in almost any organ, but the salivary glands are the most common site in children, as are the lungs in adults.
GeneRIF:16272328
INCLUSION DIS
DOID:11259
GeneRIF:12370359
INFECT CYTOMEGALOVIRUS[accessedResource: MSH:D003586][accessDate: 04-11-2010]
GeneRIF:14993594
Cytomegalovirus infectious disease[accessedResource: DOID:11259][accessDate: 04-11-2010]
Cytomagalovirus infection[accessedResource: DOID:11259][accessDate: 04-11-2010]
Cytomegalovirus infection, NOS[accessedResource: SNOMEDCT:28944009][accessDate: 04-11-2010]
GeneRIF:12478407
[X]Cytomegaloviral disease, unspecified (disorder)[accessedResource: SNOMEDCT:187456009][accessDate: 04-11-2010]
Cytomegalovirus Infections
CMV - Cytomegalovirus infection[accessedResource: SNOMEDCT:28944009][accessDate: 04-11-2010]
CYTOMEGALOVIRAL DISEASE[accessedResource: ICD9:078.5][accessDate: 04-11-2010]
CYTOMEGALIC INCLUSION DIS
GeneRIF:16267761
Inclusion Diseases, Cytomegalic
Cytomagalovirus infection
Infection with CYTOMEGALOVIRUS, characterized by enlarged cells bearing intranuclear inclusions. Infection may be in almost any organ, but the salivary glands are the most common site in children, as are the lungs in adults.[accessedResource: MSH:D003586][accessDate: 04-11-2010]
Disease due to Cytomegalovirus[accessedResource: SNOMEDCT:28944009][accessDate: 04-11-2010]
Cytomegalovirus infectious disease
[X]Cytomegaloviral disease, unspecified[accessedResource: SNOMEDCT:187456009][accessDate: 04-11-2010]
SNOMEDCT:28944009
Inclusion Disease[accessedResource: MSH:D003586][accessDate: 04-11-2010]
Cytomegalic Inclusion Diseases[accessedResource: MSH:D003586][accessDate: 04-11-2010]
MSH:D003586
Cytomegalovirus infection (disorder)[accessedResource: SNOMEDCT:28944009][accessDate: 04-11-2010]
cytomegalovirus
GeneRIF:15528370
CMV - Cytomegalovirus infection
Human Herpesvirus 5
Inclusion Disease
Cytomegaloviral disease, unspecified[accessedResource: DOID:11259][accessDate: 04-11-2010]
Inclusion Diseases
Cytomegalovirus infection, NOS
SNOMEDCT:187456009
GeneRIF:12466474
James Malone
GeneRIF:14962896
Inclusion Diseases[accessedResource: MSH:D003586][accessDate: 04-11-2010]
HCMV
James Malone
Ele Holloway
Hep3B
Hep-3B
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#institution[accessedResource: MO_601][accessDate: 04-11-2010]
Tomasz Adamusiak
institution
MO_601
NIFSTD:birnlex_2085
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#institution
Flora Logan
James Malone
A population growth assay is an assay that measures the multiplication or reproduction of cells, resulting in the rapid expansion of a cell population.
population growth assay
cell proliferation assay
growth assay
Tomasz Adamusiak
inclusive hindgut primordium
FBbt:00005523
medulla ossium
The soft, fatty, vascular tissue that fills most bone cavities and is the source of red blood cells and many white blood cells.
Tomasz Adamusiak
TAO:0000669
ZFA:0000669
head kidney[accessedResource: MAT:0000084][accessDate: 04-11-2010]
kidney marrow
anterior kidney[accessedResource: ZFA:0000669][accessDate: 04-11-2010]
Medulla ossea[accessedResource: FMAID:9608][accessDate: 04-11-2010]
bone marrow cell
The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis. Davidson and Zon 2004.
bone marrow
The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis.[accessedResource: ZFA:0000669][accessDate: 04-11-2010]
The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis.
The soft, fatty, vascular tissue that fills most bone cavities and is the source of red blood cells and many white blood cells.[accessedResource: BTO:0000141][accessDate: 04-11-2010]
SAEL:11
MAT:0000084
anterior kidney
A cell found in the bone marrow. This can include fibroblasts, macrophages, adipocytes, osteoblasts, osteoclasts, endothelial cells and hematopoietic cells.[accessedResource: CL:0002092][accessDate: 04-11-2010]
XAO:0000123
The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis. Davidson and Zon 2004.[accessedResource: TAO:0000669][accessDate: 04-11-2010]
BTO:0000141
A cell found in the bone marrow. This can include fibroblasts, macrophages, adipocytes, osteoblasts, osteoclasts, endothelial cells and hematopoietic cells.
CL:0002092
bone marrow cell[accessedResource: BTO:0000141][accessDate: 04-11-2010]
Medulla ossea
MA:0000134
head kidney
FMAID:9608
EV:0100046
kidney marrow[accessedResource: ZFA:0000669][accessDate: 04-11-2010]
medulla ossium[accessedResource: BTO:0000141][accessDate: 04-11-2010]
James Malone
GeneRIF:11951051
GeneRIF:16254490
GeneRIF:15452305
GeneRIF:14625043
Epilepsy, Lateral Temporal[accessedResource: MSH:D004833][accessDate: 04-11-2010]
Temporal lobe epilepsy (disorder)[accessedResource: DOID:3328][accessDate: 04-11-2010]
GeneRIF:14510824
Lateral Temporal Epilepsies[accessedResource: MSH:D004833][accessDate: 04-11-2010]
NIFSTD:birnlex_12733
GeneRIF:15799783
A localization-related (focal) form of epilepsy characterized by recurrent seizures that arise from foci within the temporal lobe, most commonly from its mesial aspect. A wide variety of psychic phenomena may be associated, including illusions, hallucinations, dyscognitive states, and affective experiences. The majority of complex partial seizures (see EPILEPSY, COMPLEX PARTIAL) originate from the temporal lobes. Temporal lobe seizures may be classified by etiology as cryptogenic, familial, or symptomatic (i.e., related to an identified disease process or lesion) (MeSH).
James Malone
Psychomotor seizure
GeneRIF:15079010
GeneRIF:15716416
SNOMEDCT:193000002
Epilepsies, Temporal Lobe
Childhood Benign Psychomotor Epilepsy
GeneRIF:12470703
GeneRIF:12686399
GeneRIF:14503638
GeneRIF:15145077
temporal lobe epilepsy
GeneRIF:12115687
Epilepsy, Uncinate
GeneRIF:14643764
Tomasz Adamusiak
GeneRIF:15048887
Temporal lobe epilepsy (disorder) [Ambiguous][accessedResource: DOID:3328][accessDate: 04-11-2010]
Psychomotor seizure[accessedResource: SNOMEDCT:193000002][accessDate: 04-11-2010]
Temporal Lobe Epilepsies[accessedResource: MSH:D004833][accessDate: 04-11-2010]
MSH:D004833
Temporal lobe epilepsy (disorder)
GeneRIF:12601092
GeneRIF:16095760
GeneRIF:15592755
GeneRIF:15193619
Epilepsies, Uncinate
Epilepsy, Lateral Temporal
A localization-related (focal) form of epilepsy characterized by recurrent seizures that arise from foci within the temporal lobe, most commonly from its mesial aspect. A wide variety of psychic phenomena may be associated, including illusions, hallucinations, dyscognitive states, and affective experiences. The majority of complex partial seizures (see EPILEPSY, COMPLEX PARTIAL) originate from the temporal lobes. Temporal lobe seizures may be classified by etiology as cryptogenic, familial, or symptomatic (i.e., related to an identified disease process or lesion). (From Adams et al., Principles of Neurology, 6th ed, p321)[accessedResource: MSH:D004833][accessDate: 04-11-2010]
Childhood Benign Psychomotor Epilepsy[accessedResource: MSH:D004833][accessDate: 04-11-2010]
GeneRIF:15245492
GeneRIF:15672539
DOID:3328
Lateral Temporal Epilepsies
GeneRIF:15111672
Temporal lobe epilepsy (disorder) [Ambiguous]
TLE - Temporal lobe epilepsy
A localization-related (focal) form of epilepsy characterized by recurrent seizures that arise from foci within the temporal lobe, most commonly from its mesial aspect. A wide variety of psychic phenomena may be associated, including illusions, hallucinations, dyscognitive states, and affective experiences. The majority of complex partial seizures (see EPILEPSY, COMPLEX PARTIAL) originate from the temporal lobes. Temporal lobe seizures may be classified by etiology as cryptogenic, familial, or symptomatic (i.e., related to an identified disease process or lesion) (MeSH).[accessedResource: NIFSTD:birnlex_12733][accessDate: 04-11-2010]
GeneRIF:12205652
Uncinate Epilepsy[accessedResource: NIFSTD:birnlex_12733][accessDate: 04-11-2010]
Uncinate Epilepsies[accessedResource: MSH:D004833][accessDate: 04-11-2010]
GeneRIF:12122039
A localization-related (focal) form of epilepsy characterized by recurrent seizures that arise from foci within the temporal lobe, most commonly from its mesial aspect. A wide variety of psychic phenomena may be associated, including illusions, hallucinations, dyscognitive states, and affective experiences. The majority of complex partial seizures (see EPILEPSY, COMPLEX PARTIAL) originate from the temporal lobes. Temporal lobe seizures may be classified by etiology as cryptogenic, familial, or symptomatic (i.e., related to an identified disease process or lesion). (From Adams et al., Principles of Neurology, 6th ed, p321)
TLE - Temporal lobe epilepsy[accessedResource: SNOMEDCT:193000002][accessDate: 04-11-2010]
GeneRIF:15246112
DSSTox_CID:22573
CASRN:67469-81-2
STRUCTURE_Formula:C28H36Cl2N2O
GBR 12935 dihydrochloride
DSSTox_Generic_SID:42573
James Malone
Ele Holloway
Tomasz Adamusiak
STRUCTURE_ChemicalName_IUPAC:1-[2-(diphenylmethoxy)ethyl]-4-(3-phenylpropyl)piperazine dihydrochloride
parthenolide
(1aR,7aS,10aS,10bS)-1a,5-dimethyl-8-methylidene-2,3,6,7,7a,8,10a,10b-octahydrooxireno[9,10]cyclodeca[1,2-b]furan-9(1aH)-one
20554-84-1
40579
C15H20O3
F9
Mouse cell line
F9 mouse embryonal carcinoma cell line
James Malone
Ele Holloway
Tomasz Adamusiak
slow muscle cell somite 4
ZFA:0000972
Tomasz Adamusiak
InChIKey=VVNCNSJFMMFHPL-GFBCBKCJDA
(S)-3,3-dimethylcysteine
CHEBI:7959
InChI=1/C5H11NO2S/c1-5(2,9)3(6)4(7)8/h3,9H,6H2,1-2H3,(H,7,8)/t3-/m0/s1/f/h7H
penicillaminum
A trisubstituted carboxylic acid with amino, methyl and sulfanyl substituents. Pharmaceutical form (L-form is toxic) of chelating agent used to treat heavy metal poisoning.
PA
(2S)-2-amino-3-methyl-3-sulfanylbutanoic acid
3-sulfanyl-D-valine
Cuprimine
(-)-penicillamine
CC(C)(S)[C@@H](N)C(O)=O
(S)-2-amino-3-mercapto-3-methylbutanoic acid
penicilamina
Depen
3-mercapto-D-valine
http://www.ebi.ac.uk/efo/EFO_0002726
C5H11NO2S
D-beta,beta-dimethylcysteine
Ele Holloway
D-penicillamine
D-Penamine
James Malone
antennal primordium[accessedResource: FBbt:00005510][accessDate: 04-11-2010]
antennal primordium2[accessedResource: FBbt:00005510][accessDate: 04-11-2010]
AntP2
antennal primordium1
AntP1[accessedResource: FBbt:00005510][accessDate: 04-11-2010]
.[accessedResource: FBbt:00005510][accessDate: 04-11-2010]
.
antennal primordium2
AntP1
AntP2[accessedResource: FBbt:00005510][accessDate: 04-11-2010]
P3 AntOrg
FBbt:00005510
P3 AntOrg[accessedResource: FBbt:00005510][accessDate: 04-11-2010]
antennal primordium
James Malone
GM12717
O-nitrotoluene
88-72-2
DP cell[accessedResource: CL:0000809][accessDate: 04-11-2010]
double-positive, alpha-beta immature T lymphocyte[accessedResource: CL:0000809][accessDate: 04-11-2010]
DP cell
double-positive, alpha-beta immature T lymphocyte
double-positive, alpha-beta thymocyte[accessedResource: CL:0000809][accessDate: 04-11-2010]
nontransformed thymocyte
DP thymocyte
CL:0000809
James Malone
double-positive, alpha-beta thymocyte
A thymocyte expressing the alpha-beta T cell receptor complex as well as both the CD4 and CD8 coreceptors.[accessedResource: CL:0000809][accessDate: 04-11-2010]
A thymocyte expressing the alpha-beta T cell receptor complex as well as both the CD4 and CD8 coreceptors.
C18H24O2
InChI=1/C18H24O2/c1-18-9-8-14-13-5-3-12(19)10-11(13)2-4-15(14)16(18)6-7-17(18)20/h3,5,10,14-17,19-20H,2,4,6-9H2,1H3/t14-,15-,16+,17-,18+/m1/s1
CHEBI:17160
alpha-estradiol
http://www.ebi.ac.uk/efo/EFO_0001467
[H][C@]12CC[C@]3(C)[C@H](O)CC[C@@]3([H])[C@]1([H])CCc1cc(O)ccc21
estra-1,3,5(10)trien-3,17alpha-diol
17alpha-estradiol
An estradiol that has formula C18H24O2.
estra-1,3,5(10)-triene-3,17alpha-diol
InChIKey=VOXZDWNPVJITMN-SFFUCWETBJ
James Malone
animal component
MAT:0000001
James Malone
SKBR3
Natural Language Generator 8th April 2010
A SKBR3 is a cell line.
A SKBR3 is all of the following: something that is bearer of a breast carcinoma, something that derives from
an epithelial cell, and something that derives from a mammary gland.
Medulla of suprarenal gland[accessedResource: FMAID:15633][accessDate: 04-11-2010]
BTO:0000049
MAT:0000495
EMAPA:18428
The inner, reddish-brown portion of the adrenal glands that synthesizes, stores, and releases epinephrine and norepinephrine.
Suprarenal medulla[accessedResource: FMAID:15633][accessDate: 04-11-2010]
Medulla of adrenal gland
James Malone
XAO:0000166
Suprarenal medulla
EV:0100135
Medulla of suprarenal gland
Medulla (Glandula suprarenalis)
FMAID:15633
Medulla (Glandula suprarenalis)[accessedResource: FMAID:15633][accessDate: 04-11-2010]
adrenal medulla
MA:0000119
Medulla of adrenal gland[accessedResource: FMAID:15633][accessDate: 04-11-2010]
The inner, reddish-brown portion of the adrenal glands that synthesizes, stores, and releases epinephrine and norepinephrine.[accessedResource: BTO:0000049][accessDate: 04-11-2010]
Tomasz Adamusiak
dorsal fin musculature
ZFA:0000648
Tomasz Adamusiak
cardinal system
ZFA:0000096
James Malone
female inflorescence
PO:0020126
ZEA:0015084
James Malone
CS57544 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158568&type=germplasm
CS57544
http://www.arabidopsis.org/servlets/TairObject?id=1005158568&type=germplasm
Oligodendroglioma, anaplastic (morphologic abnormality)
Ele Holloway
DOID:7154
Undifferentiated Oligodendroglioma[accessedResource: DOID:7154][accessDate: 04-11-2010]
anaplastic oligodendroglioma
James Malone
Undifferentiated Oligodendroglioma
Oligodendroglioma, anaplastic (morphologic abnormality)[accessedResource: DOID:7154][accessDate: 04-11-2010]
Group B leprosy[accessedResource: SNOMEDCT:400008009][accessDate: 04-11-2010]
DOID:1023
Leprosy, Dimorphous
Leprosies, Dimorphous
Dimorphous Leprosy[accessedResource: MSH:D015439][accessDate: 04-11-2010]
Borderline leprosy (disorder)[accessedResource: DOID:1023][accessDate: 04-11-2010]
James Malone
SNOMEDCT:400154003
BB - Borderline leprosy[accessedResource: SNOMEDCT:400154003][accessDate: 04-11-2010]
Borderline or dimorphous leprosy[accessedResource: DOID:1023][accessDate: 04-11-2010]
Borderline leprosy [group B]
A form of LEPROSY in which there are clinical manifestations of both principal types (lepromatous and tuberculoid). The disease may shift toward one of these two polar or principal forms.[accessedResource: MSH:D015439][accessDate: 04-11-2010]
Midborderline leprosy (disorder)[accessedResource: DOID:1023][accessDate: 04-11-2010]
MSH:D015439
Borderline or dimorphous leprosy
BB - Borderline leprosy
Group B leprosy
Borderline leprosy (disorder)
Midborderline leprosy[accessedResource: SNOMEDCT:400154003][accessDate: 04-11-2010]
SNOMEDCT:400008009
Midborderline leprosy
Borderline leprosy [group B][accessedResource: DOID:1023][accessDate: 04-11-2010]
A form of LEPROSY in which there are clinical manifestations of both principal types (lepromatous and tuberculoid). The disease may shift toward one of these two polar or principal forms.
Type BB leprosy
Leprosies, Borderline[accessedResource: MSH:D015439][accessDate: 04-11-2010]
ICD9:030.3
borderline leprosy
Dimorphous Leprosies[accessedResource: MSH:D015439][accessDate: 04-11-2010]
Midborderline leprosy (disorder)
Leprosies, Borderline
Type BB leprosy[accessedResource: SNOMEDCT:400154003][accessDate: 04-11-2010]
adaxial cell[accessedResource: ZFA:0000003][accessDate: 04-11-2010]
James Malone
adaxial cells
ZFA:0000003
adaxial cell
James Malone
A heart component is an animal component that is part of some heart.
heart component
http://www.ebi.ac.uk/efo/EFO_0001627
CHEBI:9629
5alpha-tomatidan-3beta-ol
InChIKey=XYNPYHXGMWJBLV-VXPJTDKGBR
(3beta,5alpha,22beta,25S)-spirosolan-3-ol
[H][C@@]12CC[C@]3([H])[C@]([H])(CC[C@@]4(C)[C@@]3([H])C[C@]3([H])O[C@@]5(CC[C@H](C)CN5)[C@@H](C)[C@]43[H])[C@@]1(C)CC[C@H](O)C2
InChI=1/C27H45NO2/c1-16-7-12-27(28-15-16)17(2)24-23(30-27)14-22-20-6-5-18-13-19(29)8-10-25(18,3)21(20)9-11-26(22,24)4/h16-24,28-29H,5-15H2,1-4H3/t16-,17-,18-,19-,20+,21-,22-,23-,24-,25-,26-,27-/m0/s1
C27H45NO2
(22S,25S)-5alpha-spirosolan-3beta-ol
Tomatidin
tomatidine
James Malone
event free survival time
James Malone
The stage or progression of a disease in an organism. Includes pathological staging of cancers and other disease progression. E.g. Dukes C stage describing colon cancer
MO_792
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#disease_staging[accessedResource: MO_792][accessDate: 04-11-2010]
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#disease_staging
Jie Zheng
Dukes C stage describing colon cancer
disease staging
STRUCTURE_Formula:C11H9NaO5S
DSSTox_CID:20547
menadione sodium bisulfite
CASRN:130-37-0
STRUCTURE_ChemicalName_IUPAC:sodium 2-methyl-1,4-dioxo-1,2,3,4-tetrahydronaphthalene-2-sulfonate
Tomasz Adamusiak
DSSTox_Generic_SID:40547
Ele Holloway
James Malone
[H][C@@]12CC=C3C[C@@H](O)CC[C@]3(C)[C@@]1([H])CC[C@]1(C)[C@H]([C@@H](C[C@@]21[H])C#N)C(C)=O
C22H31NO2
pregnenolone carbonitrile
http://www.ebi.ac.uk/efo/EFO_0001596
A nitrile that has formula C22H31NO2.
3beta-hydroxy-20-oxopregn-5-ene-16alpha-carbonitrile
InChI=1/C22H31NO2/c1-13(24)20-14(12-23)10-19-17-5-4-15-11-16(25)6-8-21(15,2)18(17)7-9-22(19,20)3/h4,14,16-20,25H,5-11H2,1-3H3/t14-,16-,17+,18-,19-,20-,21-,22-/m0/s1
InChIKey=VSBHRRMYCDQLJF-ZDNYCOCVBP
3beta-hydroxy-20-oxo-5-pregnene-16alpha-carbonitrile
CHEBI:35591
PCN
pregnenolone 16alpha-carbonitrile
Jie Zheng
Tomasz Adamusiak
liver endoderm
A portion of the retina at which the axons of the ganglion cells exit the eyeball to form the optic nerve. No light-sensitive photoreceptors are contained within this portion of the retina.
FMA:58634
optic disc
Optic Papilla[accessedResource: NCIt:C12760][accessDate: 04-11-2010]
Optic Papilla
Optic Disk[accessedResource: NCIt:C12760][accessDate: 04-11-2010]
NCIt:C12760
Optic Disk
Optic Nerve Head
James Malone
A portion of the retina at which the axons of the ganglion cells exit the eyeball to form the optic nerve. No light-sensitive photoreceptors are contained within this portion of the retina.[accessedResource: NCIt:C12760][accessDate: 04-11-2010]
Optic Nerve Head[accessedResource: NCIt:C12760][accessDate: 04-11-2010]
The most common type of non-Hodgkin lymphoma. It includes the most frequently seen morphologic variants which are: diffuse large B-cell lymphoma, follicular lymphoma, small lymphocytic lymphoma and marginal zone B-cell lymphoma. -- 2003
B-Cell Non Hodgkin's Lymphoma[accessedResource: C3457][accessDate: 04-11-2010]
B-Cell Non-Hodgkin Lymphoma[accessedResource: C3457][accessDate: 04-11-2010]
James Malone
Lymphomas Non-Hodgkin's B-Cell[accessedResource: C3457][accessDate: 04-11-2010]
The most common type of non-Hodgkin lymphoma. It includes the most frequently seen morphologic variants which are: diffuse large B-cell lymphoma, follicular lymphoma, small lymphocytic lymphoma and marginal zone B-cell lymphoma. -- 2003[accessedResource: C3457][accessDate: 04-11-2010]
C3457
peripheral B-cell neoplasm
B-cell lymphoma
B-Cell Non-Hodgkin Lymphoma
neoplasm of mature B-cells
B-Cell Non-Hodgkin's Lymphoma
Lymphomas Non-Hodgkin's B-Cell
Tomasz Adamusiak
presumptive midbrain hindbrain boundary
ZFA:0001187
Superior frontal convolution
James Malone
Marginal gyrus[accessedResource: FMA:61857][accessDate: 04-11-2010]
Superior frontal convolution[accessedResource: FMA:61857][accessDate: 04-11-2010]
Marginal gyrus
superior frontal gyrus
FMA:61857
Ele Holloway
James Malone
DMS114
DMS 114
Tomasz Adamusiak
dorsal anterior lateral line ganglion
ZFA:0001312
MDAMB134VI
James Malone
CC(C)(Oc1ccc(cc1)C2CC2(Cl)Cl)C(O)=O
Ele Holloway
CHEBI:50867
ciprofibratum
InChI=1/C13H14Cl2O3/c1-12(2,11(16)17)18-9-5-3-8(4-6-9)10-7-13(10,14)15/h3-6,10H,7H2,1-2H3,(H,16,17)/f/h16H
http://www.ebi.ac.uk/efo/EFO_0002404
ciprofibrato
C13H14Cl2O3
2-[4-(2,2-dichlorocyclopropyl)phenoxy]-2-methylpropanoic acid
James Malone
ciprofibrate
InChIKey=KPSRODZRAIWAKH-WYUMXYHSCN
A ring assembly that has formula C13H14Cl2O3.
Human[accessedResource: NIFSTD:birnlex_516][accessDate: 04-11-2010]
James Malone
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001994
Homo sapiens
NIFSTD:birnlex_516
Human
Cell lines used in experiments under the HapMap Project
HapMap cell lines
acinar cell carcinoma
A malignant glandular epithelial neoplasm consisting of secretory cells forming acinar patterns. Representative examples include the acinar cell carcinoma of the pancreas and the acinar adenocarcinoma of the prostate gland.
Carcinomas, Acinar Cell[accessedResource: MSH:D018267][accessDate: 04-11-2010]
Acinar Adenocarcinoma
A malignant tumor arising from secreting cells of a racemose gland, particularly the salivary glands. Racemose (Latin racemosus, full of clusters) refers, as does acinar (Latin acinus, grape), to small saclike dilatations in various glands. Acinar cell carcinomas are usually well differentiated and account for about 13% of the cancers arising in the parotid gland. Lymph node metastasis occurs in about 16% of cases. Local recurrences and distant metastases many years after treatment are common. This tumor appears in all age groups and is most common in women. (Stedman, 25th ed; Holland et al., Cancer Medicine, 3d ed, p1240; from DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p575)
A malignant glandular epithelial neoplasm consisting of secretory cells forming acinar patterns. Representative examples include the acinar cell carcinoma of the pancreas and the acinar adenocarcinoma of the prostate gland.[accessedResource: NCIt:C3768][accessDate: 04-11-2010]
NCIt:C3768
DOID:3025
acinar cell carcinoma (morphologic abnormality)
GeneRIF:11891193
Acinar cell carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:45410002][accessDate: 04-11-2010]
James Malone
Acinar Carcinoma[accessedResource: NCIt:C3768][accessDate: 04-11-2010]
Acinic Cell Adenocarcinoma[accessedResource: NCIt:C3768][accessDate: 04-11-2010]
Acinar carcinoma
Acinic Cell Adenocarcinoma
Acinic Cell Carcinoma[accessedResource: NCIt:C3768][accessDate: 04-11-2010]
SNOMEDCT:45410002
Acinic Cell Carcinoma
MSH:D018267
Acinar Cell Adenocarcinoma
Acinar Cell Carcinomas
Acinar adenocarcinoma[accessedResource: SNOMEDCT:45410002][accessDate: 04-11-2010]
A malignant tumor arising from secreting cells of a racemose gland, particularly the salivary glands. Racemose (Latin racemosus, full of clusters) refers, as does acinar (Latin acinus, grape), to small saclike dilatations in various glands. Acinar cell carcinomas are usually well differentiated and account for about 13% of the cancers arising in the parotid gland. Lymph node metastasis occurs in about 16% of cases. Local recurrences and distant metastases many years after treatment are common. This tumor appears in all age groups and is most common in women. (Stedman, 25th ed; Holland et al., Cancer Medicine, 3d ed, p1240; from DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p575)[accessedResource: MSH:D018267][accessDate: 04-11-2010]
Acinar Cell Adenocarcinoma[accessedResource: NCIt:C3768][accessDate: 04-11-2010]
Tomasz Adamusiak
An information entity about the status of a publication describing the experiment.
publication status
MAT:0000364
GRO:0005417
phloem
PO:0005417
BTO:0001058
A complex tissue in the vascular system of higher plants that consists mainly of sieve tubes and elongated parenchyma cells usually with fibers and that functions in translocation and in support and storage.[accessedResource: BTO:0001058][accessDate: 04-11-2010]
James Malone
GRO:0005417[accessedResource: BTO:0001058][accessDate: 04-11-2010]
A complex tissue in the vascular system of higher plants that consists mainly of sieve tubes and elongated parenchyma cells usually with fibers and that functions in translocation and in support and storage.
Tomasz Adamusiak
neurogenic placode
ZFA:0001309
Pauciarticular juvenile rheumatoid arthritis (disorder)
pauciarticular juvenile rheumatoid arthritis
pauciarticular onset juvenile arthritis[accessedResource: DOID:675][accessDate: 04-11-2010]
Pauciarticular onset juvenile chronic arthritis[accessedResource: DOID:675][accessDate: 04-11-2010]
pauciarticular onset juvenile arthritis
Pauciarticular onset juvenile chronic arthritis
Pauciarticular juvenile rheumatoid arthritis (disorder)[accessedResource: DOID:675][accessDate: 04-11-2010]
DOID:675
Tomasz Adamusiak
Ele Holloway
James Malone
Caco-2/TC7
Barbasco
5'beta-rotenone
InChI=1/C23H22O6/c1-11(2)16-8-14-15(28-16)6-5-12-22(24)21-13-7-18(25-3)19(26-4)9-17(13)27-10-20(21)29-23(12)14/h5-7,9,16,20-21H,1,8,10H2,2-4H3/t16-,20-,21+/m1/s1
Noxfire
(2R,6aS,12aS)-8,9-dimethoxy-2-(prop-1-en-2-yl)-1,2,12,12a-tetrahydrochromeno[3,4-b]furo[2,3-h]chromen-6(6aH)-one
Canex
(-)-cis-rotenone
CHEBI:28201
A chromenone that has formula C23H22O6.
[H][C@@]1(Cc2c(O1)ccc1C(=O)[C@@]3([H])c4cc(OC)c(OC)cc4OC[C@@]3([H])Oc21)C(C)=C
[2R-(2alpha,6aalpha,12aalpha)]-1,2,12,12a-tetrahydro-8,9-dimethoxy-2-(1-methylethenyl)[1]benzopyrano[3,4-b]furo[2,3-H][1]benzopyran-6(6aH)-one
James Malone
InChIKey=JUVIOZPCNVVQFO-HBGVWJBIBF
C23H22O6
http://www.ebi.ac.uk/efo/EFO_0001606
rotenone
Ele Holloway
James Malone
Tomasz Adamusiak
oncostatin M
CASRN:106956-32-5
DSSTox_Generic_SID:37070
EV:0100113
FBbt:00004924
EMAPA:18985
uterine horn[accessedResource: MAT:0000127][accessDate: 04-11-2010]
uterus
BTO:0001424
womb
WBbt:0006760
womb[accessedResource: BTO:0001424][accessDate: 04-11-2010]
MA:0000389
SAEL:119
uterine horns
An organ of the female mammal for containing and usually for nourishing the young during development previous to birth.[accessedResource: BTO:0001424][accessDate: 04-11-2010]
James Malone
uterine horns[accessedResource: MAT:0000127][accessDate: 04-11-2010]
uterine horn
Organ with organ cavity which is continuous proximally with the right and left uterine tubes and distally is connected to the vagina. Examples: There is only one uterus.
FMAID:17558
An organ of the female mammal for containing and usually for nourishing the young during development previous to birth.
MAT:0000127
TADS:0000421
CFU-C , Colony forming unit in culture[accessedResource: CL:0000557][accessDate: 04-11-2010]
A progenitor cell that has plasma membrane part CD123, CD34, and CD45RA, lacks plasma membrane part CD19 and CD3, and is committed to the granulocyte and monocyte lineages.
CFU-C , Colony forming unit in culture
granulocyte monocyte progenitor cell[accessedResource: CL:0000557][accessDate: 04-11-2010]
colony forming unit granulocyte macrophage[accessedResource: CL:0000557][accessDate: 04-11-2010]
granulocyte-macrophage progenitor
CL:0000557
CFU-GM[accessedResource: CL:0000557][accessDate: 04-11-2010]
GMP
CFU-GM
granulocyte monocyte progenitor cell
colony forming unit granulocyte macrophage
A hematopoietic progenitor cell that is committed to the granulocyte and monocyte lineages. These cells are CD123-positive, and do not express Gata-1, Gata2 but do express C/EBPa, and Pu.1.
Tomasz Adamusiak
A hematopoietic progenitor cell that is committed to the granulocyte and monocyte lineages. These cells are CD123-positive, and do not express Gata-1, Gata2 but do express C/EBPa, and Pu.1.[accessedResource: CL:0000557][accessDate: 04-11-2010]
GMP[accessedResource: CL:0000557][accessDate: 04-11-2010]
Jie Zheng
acinar cell
A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus).
acinic cell
acinous cell
acinous cell[accessedResource: CL:0000622][accessDate: 04-11-2010]
CL:0000622
Tomasz Adamusiak
acinic cell[accessedResource: CL:0000622][accessDate: 04-11-2010]
A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus).[accessedResource: CL:0000622][accessDate: 04-11-2010]
pancreatic acinar cell
NIFSTD:birnlex_12812
GeneRIF:12882809
Amended[accessedResource: DOID:10871][accessDate: 04-11-2010]
GeneRIF:12242346
GeneRIF:12902384
GeneRIF:15111581
Dystrophy, Macular
MSH:D008268
Unspecified senile macular degeneration[accessedResource: DOID:10871][accessDate: 04-11-2010]
GeneRIF:15829498
SNOMEDCT:267718000
Amended
Macular degeneration (senile) of retina, unspecified[accessedResource: DOID:10871][accessDate: 04-11-2010]
Unspecified senile macular degeneration
Dystrophies, Macular[accessedResource: MSH:D008268][accessDate: 04-11-2010]
AMD - Age-related macular degeneration[accessedResource: SNOMEDCT:267718000][accessDate: 04-11-2010]
GeneRIF:15761120
GeneRIF:15208270
DOID:10871
Macular Dystrophy[accessedResource: MSH:D008268][accessDate: 04-11-2010]
Maculopathies, Age-Related
GeneRIF:14597045
Tomasz Adamusiak
Age-Related Macular Degenerations
Senile macular retinal degeneration[accessedResource: SNOMEDCT:302891003][accessDate: 04-11-2010]
GeneRIF:11919200
Age-related macular degeneration (disorder)[accessedResource: SNOMEDCT:267718000][accessDate: 04-11-2010]
Senile macular degeneration
Degenerations, Age-Related Macular[accessedResource: MSH:D008268][accessDate: 04-11-2010]
MACULOPATHY AGE RELAT[accessedResource: MSH:D008268][accessDate: 04-11-2010]
Age related macular degeneration (disorder) [Ambiguous][accessedResource: DOID:10871][accessDate: 04-11-2010]
SMD - Senile macular degeneration
Macular Degenerations[accessedResource: MSH:D008268][accessDate: 04-11-2010]
armD[accessedResource: DOID:10871][accessDate: 04-11-2010]
Degenerative changes in the RETINA usually of older adults which results in a loss of vision in the center of the visual field (the MACULA LUTEA) because of damage to the retina. It occurs in dry and wet forms.[accessedResource: MSH:D008268][accessDate: 04-11-2010]
MACULOPATHIES AGE RELAT
GeneRIF:12742846
Age related macular degeneration (disorder) [Ambiguous]
MACULAR DEGENERATION NOS[accessedResource: ICD9:362.50][accessDate: 04-11-2010]
Macular degeneration (disorder)[accessedResource: SNOMEDCT:302891003][accessDate: 04-11-2010]
GeneRIF:15479453
ARMD
MACULAR DEGENERATION NOS
Maculopathy, Age-Related
Senile macular degeneration of retina
Degenerations, Macular
GeneRIF:12427233
ARMD - Age-related macular degeneration
Macular degeneration (senile) of retina, unspecified
AMD - Age-related macular degeneration
Degeneration, Macular[accessedResource: MSH:D008268][accessDate: 04-11-2010]
Senile macular degeneration[accessedResource: NIFSTD:birnlex_12812][accessDate: 04-11-2010]
Senile macular degeneration of retina[accessedResource: NIFSTD:birnlex_12812][accessDate: 04-11-2010]
Maculopathies, Age-Related[accessedResource: MSH:D008268][accessDate: 04-11-2010]
MACULOPATHY AGE RELAT
Degenerative changes in the macula lutea of the retina.
Degenerative changes in the RETINA usually of older adults which results in a loss of vision in the center of the visual field (the MACULA LUTEA) because of damage to the retina. It occurs in dry and wet forms.
AAMD - Age related macular degeneration[accessedResource: SNOMEDCT:267718000][accessDate: 04-11-2010]
Degeneration, Macular
GeneRIF:12005165
Senile macular retinal degeneration
Age-Related Maculopathy[accessedResource: MSH:D008268][accessDate: 04-11-2010]
James Malone
SMD - Senile macular degeneration[accessedResource: SNOMEDCT:267718000][accessDate: 04-11-2010]
GeneRIF:16079201
Age-related macular degeneration (disorder)
GeneRIF:14587307
age-related macular degeneration
ARMD - Age-related macular degeneration[accessedResource: SNOMEDCT:267718000][accessDate: 04-11-2010]
AAMD - Age related macular degeneration
Macular degeneration (disorder)
SNOMEDCT:302891003
GeneRIF:15761121
GeneRIF:12099691
GeneRIF:12592048
AGE RELAT MACULOPATHIES[accessedResource: MSH:D008268][accessDate: 04-11-2010]
Dystrophies, Macular
GeneRIF:15028284
GeneRIF:15761122
ICD9:362.50
GeneRIF:14609921
EMAPA:18852
MAT:0000044
MA:0000338
duodenum
FMAID:7206
The first part of the small intestine extending from the pylorus to the jejunum.[accessedResource: BTO:0000365][accessDate: 04-11-2010]
James Malone
The first part of the small intestine extending from the pylorus to the jejunum.
BTO:0000365
EHDAA:3830
XAO:0000236
EV:0100073
SAEL:31
James Malone
CS57813 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158837&type=germplasm
CS57813
http://www.arabidopsis.org/servlets/TairObject?id=1005158837&type=germplasm
Ele Holloway
James Malone
UACC893
James Malone
A viral disease is a disease factor that is caused primarily by the infection or otherise hosting of a virus.
viral disease
Ele Holloway
James Malone
ovarian adenoma benign
L-ascorbic acid
50-81-7
ethylene
ethene
C2H4
James Malone
Aethylen
InChIKey=VGGSQFUCUMXWEO-UHFFFAOYAE
CH2=CH2
An alkene that has formula C2H4.
C=C
http://www.ebi.ac.uk/efo/EFO_0001532
CHEBI:18153
Aethen
H2C=CH2
InChI=1/C2H4/c1-2/h1-2H2
SUM185PE
James Malone
Pyemia[accessedResource: MSH:D018805][accessDate: 04-11-2010]
sepsis
GeneRIF:14517747
GeneRIF:12643861
GeneRIF:15650061
GeneRIF:16260097
GeneRIF:15124023
GeneRIF:15554961
GeneRIF:15050965
GeneRIF:12031601
GeneRIF:15211109
Septicaemia, NOS
Pyemia
Septicemia, NOS[accessedResource: SNOMEDCT:91302008][accessDate: 04-11-2010]
Blood Poisonings
GeneRIF:15187138
Systemic infection
SNOMEDCT:91302008
Pyemias
GeneRIF:15383576
GeneRIF:15579460
GeneRIF:15845485
GeneRIF:12496437
GeneRIF:12198614
The presence of pathogenic microorganisms in the blood stream causing a rapidly progressing systemic reaction that may lead to shock. Symptoms include fever, chills, tachycardia, and increased respiratory rate. It is a medical emergency that requires urgent medical attention.[accessedResource: NCIt:C3364][accessDate: 04-11-2010]
GeneRIF:15890324
GeneRIF:12959973
GeneRIF:11774822
Systemic inflammatory response syndrome with a proven or suspected infectious etiology. When sepsis is associated with organ dysfunction distant from the site of infection, it is called severe sepsis. When sepsis is accompanied by HYPOTENSION despite adequate fluid infusion, it is called SEPTIC SHOCK.[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:15489642
GeneRIF:15563579
GeneRIF:15834309
GeneRIF:12006369
GeneRIF:15733912
GeneRIF:14659593
Severe Sepsis[accessedResource: MSH:D018805][accessDate: 04-11-2010]
Pyaemias[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:12055255
GeneRIF:15845478
Systemic infection (disorder)[accessedResource: SNOMEDCT:91302008][accessDate: 04-11-2010]
Sepsis, NOS[accessedResource: SNOMEDCT:91302008][accessDate: 04-11-2010]
GeneRIF:15155612
Sepsis associated with organ dysfunction distant from the site of infection.[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:15834314
GeneRIF:15557190
GeneRIF:15504976
GeneRIF:15717270
GeneRIF:12027409
GeneRIF:16207247
GeneRIF:14991091
GeneRIF:15131465
POIS BLOOD[accessedResource: MSH:D018805][accessDate: 04-11-2010]
Systemic infection, NOS
GeneRIF:11876758
Pyaemia[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:12946935
GeneRIF:12032273
GeneRIF:14993594
GeneRIF:14634136
GeneRIF:12480554
GeneRIF:12571074
GeneRIF:12593995
GeneRIF:15244040
GeneRIF:14966572
Septicemia
GeneRIF:12117955
GeneRIF:15947070
GeneRIF:15129283
Sepsis, Severe
Septicemia, NOS
Pyohemia[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:15803053
Septicemia caused by pyogenic microorganisms (e.g., STAPHYLOCOCCUS; BACILLUS), resulting in the formation of secondary foci of SUPPURATION and multiple ABSCESSES.[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:12219025
Sepsis, NOS
Pyohemias[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:12947340
GeneRIF:15545827
GeneRIF:15634264
GeneRIF:15472172
GeneRIF:15634936
GeneRIF:12615620
GeneRIF:12052963
GeneRIF:15760677
GeneRIF:11770048
GeneRIF:12219031
GeneRIF:12147224
Septicemia[accessedResource: MSH:D018805][accessDate: 04-11-2010]
James Malone
MSH:D018805
Pyohemias
GeneRIF:15614130
Systemic infection (disorder)
Systemic disease associated with the presence of pathogenic microorganisms or their toxins in the blood.[accessedResource: MSH:D018805][accessDate: 04-11-2010]
A disease of infectious agent resulting from the presence of pathogenic microbial agents, including pathogenic viruses, pathogenic bacteria, fungi, protozoa, multicellular parasites, and aberrant proteins known as prions. These pathogens are able to cause disease in animals and/or plants. Infectious pathologies are usually qualified as contagious disease (also called communicable disease) due to their potentiality of transmission from one person or species to another.
GeneRIF:12296849
GeneRIF:12721157
Septicemia caused by pyogenic microorganisms (e.g., STAPHYLOCOCCUS; BACILLUS), resulting in the formation of secondary foci of SUPPURATION and multiple ABSCESSES.
GeneRIF:15645239
The presence of pathogenic microorganisms in the blood stream causing a rapidly progressing systemic reaction that may lead to shock. Symptoms include fever, chills, tachycardia, and increased respiratory rate. It is a medical emergency that requires urgent medical attention.
Systemic infection, NOS[accessedResource: SNOMEDCT:91302008][accessDate: 04-11-2010]
GeneRIF:15155262
Septicemias
Poisoning, Blood[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:15128822
GeneRIF:12022759
Sepsis associated with organ dysfunction distant from the site of infection.
GeneRIF:12604029
GeneRIF:14688199
GeneRIF:12946943
Systemic inflammatory response syndrome with a proven or suspected infectious etiology. When sepsis is associated with organ dysfunction distant from the site of infection, it is called severe sepsis. When sepsis is accompanied by HYPOTENSION despite adequate fluid infusion, it is called SEPTIC SHOCK.
Septicemias[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:12869495
POIS BLOOD
GeneRIF:12472775
Septicaemia, NOS[accessedResource: SNOMEDCT:91302008][accessDate: 04-11-2010]
Pyaemia
GeneRIF:12117983
Pyohemia
GeneRIF:15585684
GeneRIF:11956648
GeneRIF:15030585
Blood Poisonings[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:15489631
Systemic infection[accessedResource: SNOMEDCT:91302008][accessDate: 04-11-2010]
GeneRIF:12218141
Pyaemias
GeneRIF:11776298
GeneRIF:12517942
Pyemias[accessedResource: MSH:D018805][accessDate: 04-11-2010]
GeneRIF:12218091
GeneRIF:15545825
GeneRIF:12093893
GeneRIF:14660484
GeneRIF:15240146
GeneRIF:15328161
GeneRIF:16239554
Blood Poisoning
GeneRIF:14525968
GeneRIF:15034057
NCIt:C3364
GeneRIF:15201701
Systemic disease associated with the presence of pathogenic microorganisms or their toxins in the blood.
GeneRIF:15319291
mmol
James Malone
millimole
A millimole is a substance unit equal to a thousandth of a mol or 10^[-3] mol.
UO:0000040
A substance unit equal to a thousandth of a mol or 10^[-3] mol.
true
http://www.ebi.ac.uk/efo/EFO_0001802
protocol
James Malone
MO_214
plan specification
true
Tomasz Adamusiak
a protocol is a plan specification which has sufficient level of detail and quantitative information to communicate it between domain experts, so that different domain experts will reliably be able to independently reproduce the process.
A protocol is an information entity which is a set of instructions that describe an how an experiment is done.
Jie Zheng
http://www.ebi.ac.uk/efo/EFO_0001442
PMID:18564034
H9
Tomasz Adamusiak
NIFSTD:nlx_cell_20090201
BTO:0000452
fibroblast
mouse embryonic fibroblast
A large, flat, oval cell found in connective tissue and responsible for the formation of fibers.
A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules.
James Malone
A connective-tissue cell of mesenchymal origin that secretes proteins and especially molecular collagen from which the extracellular fibrillar matrix of connective tissue forms.[accessedResource: BTO:0000452][accessDate: 04-11-2010]
A connective-tissue cell of mesenchymal origin that secretes proteins and especially molecular collagen from which the extracellular fibrillar matrix of connective tissue forms.
Tomasz Adamusiak
CL:0000057
A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules. Flattened and irregular in outline with branching processes; appear fusiform or spindle-shaped.[accessedResource: CL:0000057][accessDate: 04-11-2010]
A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules. Flattened and irregular in outline with branching processes; appear fusiform or spindle-shaped.
A large, flat, oval cell found in connective tissue and responsible for the formation of fibers.[accessedResource: NIFSTD:nlx_cell_20090201][accessDate: 04-11-2010]
primary dermal fibroblast
Tomasz Adamusiak
vascular cord
ZFA:0005077
ecdysone
3604-87-3
Ele Holloway
James Malone
ITM-E6E7-ST
James Malone
ligament
FMA:30319
Tomasz Adamusiak
somite 1
ZFA:0000072
thioridazinum
CHEBI:9566
Malloryl
tioridazina
Mellerette
C21H26N2S2
A phenothiazine that has formula C21H26N2S2.
3-Methylmercapto-N-(2'-(N-methyl-2-piperidyl)ethyl)phenothiazine
A phenothiazine derivative having a methylsulfanyl subsitituent at the 2-position and a (1-methylpiperidin-2-yl)ethyl] group at the N-10 position.
Sonapax
Mellaril
Mellaril-S
InChI=1/C21H26N2S2/c1-22-13-6-5-7-16(22)12-14-23-18-8-3-4-9-20(18)25-21-11-10-17(24-2)15-19(21)23/h3-4,8-11,15-16H,5-7,12-14H2,1-2H3
2-Methylmercapto-10-(2-(N-methyl-2-piperidyl)ethyl)phenothiazine
Mellerets
Thioridazin
InChIKey=KLBQZWRITKRQQV-UHFFFAOYAE
10-[2-(1-methyl-2-piperidyl)ethyl]-2-methylsulfanyl-phenothiazine
Orsanil
http://www.ebi.ac.uk/efo/EFO_0001625
Melleril
Mallorol
CSc1ccc2Sc3ccccc3N(CCC3CCCCN3C)c2c1
thioridazine
Meleril
10-[2-(1-methylpiperidin-2-yl)ethyl]-2-(methylsulfanyl)-10H-phenothiazine
http://www.ebi.ac.uk/efo/EFO_0001586
oligomycins
CHEBI:25675
oligomycin
James Malone
Wistar-Furth
RGD:1357955
botanical insecticides
http://www.ebi.ac.uk/efo/EFO_0001819
phytogenic insecticide
CHEBI:22917
James Malone
An insecticide compound naturally occurring in plants.
botanical insecticide
phytogenic insecticides
Tomasz Adamusiak
longitudinal visceral muscle primordium
FBbt:00017008
animal reproductive system cell
James Malone
CS57769 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158793&type=germplasm
CS57769
http://www.arabidopsis.org/servlets/TairObject?id=1005158793&type=germplasm
HF - High fat diet[accessedResource: SNOMEDCT:226097005][accessDate: 04-11-2010]
HF - High fat diet
SNOMEDCT:226097005
Jie Zheng
Tomasz Adamusiak
high fat diet
High fat diet (finding)
High fat diet (finding)[accessedResource: SNOMEDCT:226097005][accessDate: 04-11-2010]
Mixed hyperlipidemia (disorder)
A type of familial lipid metabolism disorder characterized by a variable pattern of elevated plasma CHOLESTEROL and/or TRIGLYCERIDES. Multiple genes on different chromosomes may be involved, such as the major late transcription factor (UPSTREAM STIMULATORY FACTORS) on CHROMOSOME 1.[accessedResource: MSH:D006950][accessDate: 04-11-2010]
Multiple Lipoprotein-Type Hyperlipidemias
GeneRIF:12370850
familial multiple lipoprotein-type hyperlipidemia (disorder)
SNOMEDCT:238040008
Familial hyperlipoproteinemia type IIb
GeneRIF:16076849
Familial combined hyperlipidaemia
GeneRIF:15136067
Familial hyperlipoproteinaemia type IIb
Mixed hyperlipidemia
familial combined hyperlipidemia (disorder) [Ambiguous][accessedResource: DOID:13809][accessDate: 04-11-2010]
FCHL - Familial combined hyperlipidaemia[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
GeneRIF:14991056
Fredrickson type IIb hyperlipoproteinaemia
Familial multiple lipoprotein-type hyperlipidemia
Hyperapobetalipoproteinemia[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
Hyperlipidemias, Multiple Lipoprotein-Type[accessedResource: MSH:D006950][accessDate: 04-11-2010]
ICD9:272.2
Multiple-type hyperlipidemia
Hyperapobetalipoproteinaemia[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
GeneRIF:11979403
Familial Combined Hyperlipidemias
Familial hyperlipoproteinaemia type IIb[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
Combined Hyperlipidemias, Familial[accessedResource: MSH:D006950][accessDate: 04-11-2010]
Hyperlipidemia, Multiple Lipoprotein Type
Familial multiple lipoprotein-type hyperlipidaemia[accessedResource: SNOMEDCT:299465007][accessDate: 04-11-2010]
hyperbetalipoproteinemia with prebetalipoproteinemia
GeneRIF:15976322
GeneRIF:12738753
mixed hyperlipidemia (disorder)[accessedResource: DOID:13809][accessDate: 04-11-2010]
Fredrickson type IIb hyperlipoproteinemia[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
SNOMEDCT:267434003
FCHL - Familial combined hyperlipidemia[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
hyperbetalipoproteinemia with prebetalipoproteinemia[accessedResource: DOID:13809][accessDate: 04-11-2010]
Mixed hyperlipidaemia
Hyperapobetalipoproteinaemia
Familial combined hyperlipidemia (disorder)[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
Familial multiple lipoprotein-type hyperlipidaemia
GeneRIF:12006395
Multiple-type hyperlipidaemia
SNOMEDCT:299465007
Fredrickson type IIb hyperlipoproteinaemia[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
Familial hyperlipoproteinemia type IIb[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
Multiple-type hyperlipidemia[accessedResource: SNOMEDCT:267434003][accessDate: 04-11-2010]
GeneRIF:14680975
Mixed hyperlipidemia[accessedResource: ICD9:272.2][accessDate: 04-11-2010]
type IIb hyperlipoproteinemia[accessedResource: DOID:13809][accessDate: 04-11-2010]
familial combined hyperlipidemia
DOID:13809
Familial multiple lipoprotein-type hyperlipidemia[accessedResource: SNOMEDCT:299465007][accessDate: 04-11-2010]
A type of familial lipid metabolism disorder characterized by a variable pattern of elevated plasma CHOLESTEROL and/or TRIGLYCERIDES. Multiple genes on different chromosomes may be involved, such as the major late transcription factor (UPSTREAM STIMULATORY FACTORS) on CHROMOSOME 1.
Mixed hyperlipidaemia[accessedResource: SNOMEDCT:267434003][accessDate: 04-11-2010]
familial combined hyperlipidemia (disorder)
Familial combined hyperlipidaemia[accessedResource: SNOMEDCT:238040008][accessDate: 04-11-2010]
Fredrickson type IIb hyperlipoproteinemia
Multiple-type hyperlipidaemia[accessedResource: SNOMEDCT:267434003][accessDate: 04-11-2010]
familial multiple lipoprotein-type hyperlipidemia (disorder)[accessedResource: DOID:13809][accessDate: 04-11-2010]
GeneRIF:15959806
Hyperlipidemia, Multiple Lipoprotein-Type[accessedResource: MSH:D006950][accessDate: 04-11-2010]
familial combined hyperlipidemia (disorder) [Ambiguous]
GeneRIF:12468272
MSH:D006950
type IIb hyperlipoproteinemia
FCHL - Familial combined hyperlipidemia
Hyperapobetalipoproteinemia
GeneRIF:12401883
James Malone
FCHL - Familial combined hyperlipidaemia
Was originally considered to be a breast cancer cell line but has since been identified as a melanoma cell line.
James Malone
MDAMB435
InChI=1/C22H29FO5/c1-12-8-16-15-5-4-13-9-14(25)6-7-19(13,2)21(15,23)17(26)10-20(16,3)22(12,28)18(27)11-24/h6-7,9,12,15-17,24,26,28H,4-5,8,10-11H2,1-3H3/t12-,15+,16+,17+,19+,20+,21+,22+/m1/s1
[H][C@@]12C[C@@H](C)[C@](O)(C(=O)CO)[C@@]1(C)C[C@H](O)[C@@]1(F)[C@@]2([H])CCC2=CC(=O)C=C[C@]12C
9-fluoro-11beta,17,21-trihydroxy-16alpha-methylpregna-1,4-diene-3,20-dione
InChIKey=UREBDLICKHMUKA-CXSFZGCWBM
A fluorinated steroid that has formula C22H29FO5.
dexamethasonum
1-Dehydro-16alpha-methyl-9alpha-fluorohydrocortisone
16alpha-Methyl-9alpha-fluoro-1-dehydrocortisol
http://www.ebi.ac.uk/efo/EFO_0001519
James Malone
dexamethasone
9alpha-Fluoro-16alpha-methylprednisolone
C22H29FO5
dexametasona
CHEBI:41879
Decadron
MA:0000925
Nuclei of stria terminalis[accessedResource: FMA:61884][accessDate: 04-11-2010]
Stria terminalis nucleus[accessedResource: FMA:61884][accessDate: 04-11-2010]
FMA:61884
Bed nucleus of stria terminalis[accessedResource: FMA:61884][accessDate: 04-11-2010]
Nucleus of stria terminalis[accessedResource: FMA:61884][accessDate: 04-11-2010]
Stria terminalis nucleus
Intercalate nucleus of stria terminalis
Nucleus of stria terminalis
Bed nucleus of stria terminalis
nucleus of terminal stria
Nuclei of stria terminalis
Intercalate nucleus of stria terminalis[accessedResource: FMA:61884][accessDate: 04-11-2010]
iberin
ovarian cancer cell lines
Ele Holloway
James Malone
PC-7
Tomasz Adamusiak
proventriculus primordium
FBbt:00005550
fenpropimorph
4-[3-(4-tert-butylphenyl)-2-methylpropyl]-2,6-dimethylmorpholine
Mistral
4-[3-[4-(1,1-dimethylethyl)phenyl]-2-methylpropyl]-2,6-dimethylmorpholine
CC(CN1CC(C)OC(C)C1)Cc1ccc(cc1)C(C)(C)C
C20H33NO
InChIKey=RYAUSSKQMZRMAI-UHFFFAOYAY
http://www.ebi.ac.uk/efo/EFO_0002408
Corbel
A morpholine that has formula C20H33NO.
James Malone
CHEBI:50148
Ele Holloway
InChI=1/C20H33NO/c1-15(12-21-13-16(2)22-17(3)14-21)11-18-7-9-19(10-8-18)20(4,5)6/h7-10,15-17H,11-14H2,1-6H3
James Malone
CS57663 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158687&type=germplasm
CS57663
http://www.arabidopsis.org/servlets/TairObject?id=1005158687&type=germplasm
Tomasz Adamusiak
ventral thoracic disc
FBbt:00001780
foetal structure
Ele Holloway
James Malone
NCI-H838
NOD[accessedResource: NCIt:C37417][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
NOD mouse
NCIt:C37417
NOD
Ele Holloway
James Malone
NCI-H446
sulfur mustard
James Malone
Yperite
http://www.ebi.ac.uk/efo/EFO_0001492
bis(2-chloroethyl) sulphide
bis(2-chloroethyl) sulfide
mustard gas
InChI=1/C4H8Cl2S/c5-1-3-7-4-2-6/h1-4H2
ClCCSCCCl
1,1'-thiobis(2-chloroethane)
Lost
bis(2-chloroethyl)sulfane
1-chloro-2-[(2-chloroethyl)sulfanyl]ethane
Senfgas
InChIKey=QKSKPIVNLNLAAV-UHFFFAOYAK
C4H8Cl2S
An ethyl sulfide that has formula C4H8Cl2S.
1-chloro-2-[(2-chloroethyl)thio]ethane
CHEBI:25434
Ele Holloway
James Malone
TANOUE
Ele Holloway
James Malone
UMUC3
Ele Holloway
James Malone
NALM6
GeneRIF:15998644
GeneRIF:15024693
GeneRIF:15448191
Central neuroblastoma
GeneRIF:12962147
Neuroblastoma, NOS[accessedResource: SNOMEDCT:87364003][accessDate: 04-11-2010]
GeneRIF:12593854
GeneRIF:14663483
GeneRIF:11928813
GeneRIF:13679866
GeneRIF:16091745
GeneRIF:15486895
GeneRIF:15514946
GeneRIF:15488758
GeneRIF:11859407
GeneRIF:11744098
GeneRIF:15280446
[M]Neuroblastoma NOS[accessedResource: SNOMEDCT:269507008][accessDate: 04-11-2010]
GeneRIF:12154078
GeneRIF:12717420
GeneRIF:12085233
GeneRIF:15004408
GeneRIF:15518890
GeneRIF:12629151
GeneRIF:12907629
GeneRIF:15930276
GeneRIF:12031683
GeneRIF:15618969
GeneRIF:14988008
GeneRIF:16007146
GeneRIF:11836564
GeneRIF:12888911
GeneRIF:15741235
GeneRIF:11807986
GeneRIF:15547663
GeneRIF:12185581
Sympathicoblastoma
GeneRIF:15316056
GeneRIF:15735700
GeneRIF:15117961
GeneRIF:12675130
GeneRIF:12438307
GeneRIF:16228012
Sympathicoblastoma[accessedResource: SNOMEDCT:87364003][accessDate: 04-11-2010]
GeneRIF:15607966
GeneRIF:12829373
GeneRIF:11705866
GeneRIF:12916719
neuroblastoma (morphologic abnormality)
A neuroblastic tumor characterized by the presence of neuroblastic cells, the absence of ganglion cells, and the absence of a prominent Schwannian stroma formation.[accessedResource: NCIt:C3270][accessDate: 04-11-2010]
GeneRIF:12884264
A common neoplasm of early childhood arising from neural crest cells in the sympathetic nervous system, and characterized by diverse clinical behavior, ranging from spontaneous remission to rapid metastatic progression and death. This tumor is the most common intraabdominal malignancy of childhood, but it may also arise from thorax, neck, or rarely occur in the central nervous system. Histologic features include uniform round cells with hyperchromatic nuclei arranged in nests and separated by fibrovascular septa. Neuroblastomas may be associated with the opsoclonus-myoclonus syndrome (MeSH).
GeneRIF:15240516
GeneRIF:14645238
GeneRIF:15994346
GeneRIF:14724587
GeneRIF:15218241
GeneRIF:16125842
MSH:D009447
GeneRIF:12545167
NB - Neuroblastoma[accessedResource: SNOMEDCT:87364003][accessDate: 04-11-2010]
GeneRIF:12647219
(neuroblastoma NOS) or (sympathicoblastoma)[accessedResource: DOID:769][accessDate: 04-11-2010]
GeneRIF:15644444
GeneRIF:12629521
GeneRIF:12672031
neuroblastoma NOS (morphologic abnormality)
GeneRIF:12808116
A common neoplasm of early childhood arising from neural crest cells in the sympathetic nervous system, and characterized by diverse clinical behavior, ranging from spontaneous remission to rapid metastatic progression and death. This tumor is the most common intraabdominal malignancy of childhood, but it may also arise from thorax, neck, or rarely occur in the central nervous system. Histologic features include uniform round cells with hyperchromatic nuclei arranged in nests and separated by fibrovascular septa. Neuroblastomas may be associated with the opsoclonus-myoclonus syndrome (MeSH).[accessedResource: NIFSTD:birnlex_12631][accessDate: 04-11-2010]
GeneRIF:15882878
NIFSTD:birnlex_12631
Central neuroblastoma[accessedResource: SNOMEDCT:87364003][accessDate: 04-11-2010]
GeneRIF:14719101
GeneRIF:12598334
Neuroblastoma (Schwannian Stroma-Poor)[accessedResource: NCIt:C3270][accessDate: 04-11-2010]
neuroblastoma
DOID:769
GeneRIF:15849504
GeneRIF:11870543
[M]Neuroblastoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:269507008][accessDate: 04-11-2010]
A common neoplasm of early childhood arising from neural crest cells in the sympathetic nervous system, and characterized by diverse clinical behavior, ranging from spontaneous remission to rapid metastatic progression and death. This tumor is the most common intraabdominal malignancy of childhood, but it may also arise from thorax, neck, or rarely occur in the central nervous system. Histologic features include uniform round cells with hyperchromatic nuclei arranged in nests and separated by fibrovascular septa. Neuroblastomas may be associated with the opsoclonus-myoclonus syndrome. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2099-2101; Curr Opin Oncol 1998 Jan;10(1):43-51)
GeneRIF:14654552
A common neoplasm of early childhood arising from neural crest cells in the sympathetic nervous system, and characterized by diverse clinical behavior, ranging from spontaneous remission to rapid metastatic progression and death. This tumor is the most common intraabdominal malignancy of childhood, but it may also arise from thorax, neck, or rarely occur in the central nervous system. Histologic features include uniform round cells with hyperchromatic nuclei arranged in nests and separated by fibrovascular septa. Neuroblastomas may be associated with the opsoclonus-myoclonus syndrome. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, pp2099-2101; Curr Opin Oncol 1998 Jan;10(1):43-51)[accessedResource: MSH:D009447][accessDate: 04-11-2010]
GeneRIF:15827327
GeneRIF:12964007
GeneRIF:15328517
SNOMEDCT:269507008
GeneRIF:11881792
Tomasz Adamusiak
James Malone
GeneRIF:12239177
GeneRIF:15322424
neuroblastoma NOS (morphologic abnormality)[accessedResource: DOID:769][accessDate: 04-11-2010]
A neuroblastic tumor characterized by the presence of neuroblastic cells, the absence of ganglion cells, and the absence of a prominent Schwannian stroma formation.
GeneRIF:14995074
GeneRIF:11861392
GeneRIF:15375504
GeneRIF:12557224
Neuroblastoma (morphologic abnormality)[accessedResource: SNOMEDCT:87364003][accessDate: 04-11-2010]
GeneRIF:15719172
GeneRIF:11877677
NB - Neuroblastoma
GeneRIF:11877670
NCIt:C3270
GeneRIF:12118090
GeneRIF:12209604
GeneRIF:16051641
neuroblastoma (Schwannian Stroma-Poor)
[M]Neuroblastoma NOS (morphologic abnormality)
GeneRIF:12174591
Neuroblastomas
GeneRIF:15083193
GeneRIF:15650242
GeneRIF:11782392
GeneRIF:12163469
GeneRIF:14745549
SNOMEDCT:87364003
GeneRIF:16098972
[M]Neuroblastoma NOS
GeneRIF:11737230
GeneRIF:16166307
GeneRIF:15516980
GeneRIF:12576454
GeneRIF:16092940
Neuroblastoma, NOS
GeneRIF:16232196
GeneRIF:16177824
GeneRIF:15136145
GeneRIF:15168079
(neuroblastoma NOS) or (sympathicoblastoma)
GeneRIF:15015775
Neuroblastomas[accessedResource: MSH:D009447][accessDate: 04-11-2010]
GeneRIF:15166121
corpus cardiacum primordium[accessedResource: FBbt:00001720][accessDate: 04-11-2010]
James Malone
embryonic corpus cardiacum
P1 CC[accessedResource: FBbt:00001720][accessDate: 04-11-2010]
embryonic corpus allatum
The corpora cardiaca precursor first appear during stage 10 as two pairs of head mesoderm cells between the roof of the stomodeum and the inner surface of the brain primordium. Between stages 11 and 15, these cells migrate posteriorly, gradually increasing in number. During stage 15, they fuse with the precursors of the corpus allatum from the gnathal mesoderm to form the ring gland.
corpus cardiacum placode
embryonic corpus allatum[accessedResource: FBbt:00001720][accessDate: 04-11-2010]
The corpora cardiaca precursor first appear during stage 10 as two pairs of head mesoderm cells between the roof of the stomodeum and the inner surface of the brain primordium. Between stages 11 and 15, these cells migrate posteriorly, gradually increasing in number. During stage 15, they fuse with the precursors of the corpus allatum from the gnathal mesoderm to form the ring gland.[accessedResource: FBbt:00001720][accessDate: 04-11-2010]
P1 CC
corpus cardiacum placode[accessedResource: FBbt:00001720][accessDate: 04-11-2010]
FBbt:00001720
corpus cardiacum primordium
Panc1
Ele Holloway
PANC-1
James Malone
Tomasz Adamusiak
middle lateral line neuromast
ZFA:0000939
Ele Holloway
James Malone
JRT3T35
A phenothiazine derivative having a chloro subsitituent at the 2-position and a 3-(4-methylpiperazin-1-yl)propyl group at the N-10 position.
prochlorperazine
http://www.ebi.ac.uk/efo/EFO_0001597
3-Chloro-10-(3-(4-methyl-1-piperazinyl)propyl)phenothiazine
N-(gamma-(4'-Methylpiperazinyl-1')propyl)-3-chlorophenothiazine
proclorperazina
InChI=1/C20H24ClN3S/c1-22-11-13-23(14-12-22)9-4-10-24-17-5-2-3-6-19(17)25-20-8-7-16(21)15-18(20)24/h2-3,5-8,15H,4,9-14H2,1H3
CHEBI:8435
Prochlorpermazine
A N-methylpiperazine that has formula C20H24ClN3S.
James Malone
Prochlorpromazine
CN1CCN(CCCN2c3ccccc3Sc3ccc(Cl)cc23)CC1
Prochlorperazin
prochlorperazinum
Procloperazine
2-chloro-10-[3-(4-methylpiperazin-1-yl)propyl]-10H-phenothiazine
Chloro-3 (N-methylpiperazinyl-3 propyl)-10 phenothiazine
C20H24ClN3S
InChIKey=WIKYUJGCLQQFNW-UHFFFAOYAF
2-Chloro-10-(3-(4-methyl-1-piperazinyl)propyl)phenothiazine
James Malone
Time of survival is an information entity which is about the length of time a material entity has survived after some adverse event, such as infection from a disease.
time of survival
PERSON: James Malone
cysteine
C
InChIKey=XUJNEKJLAYXESH-SNQCPAJUDK
A cysteine that has formula C3H7NO2S.
L-Zystein
Cys
N[C@@H](CS)C(O)=O
L-Cystein
CHEBI:17561
C3H7NO2S
http://www.ebi.ac.uk/efo/EFO_0001516
(2R)-2-amino-3-mercaptopropanoic acid
FREE CYSTEINE
L-cysteine
(2R)-2-amino-3-sulfanylpropanoic acid
L-2-Amino-3-mercaptopropionic acid
InChI=1/C3H7NO2S/c4-2(1-7)3(5)6/h2,7H,1,4H2,(H,5,6)/t2-/m0/s1/f/h5H
(R)-2-amino-3-mercaptopropanoic acid
James Malone
http://www.ebi.ac.uk/efo/EFO_0002647
Mus musculus domesticus
Mus domesticus
western European house mouse
Anal canal[accessedResource: FMAID:15703][accessDate: 04-11-2010]
cloacal chamber
anal region
The anus is situated in a small area of membrane between the bases of the cerci.
anus[accessedResource: MAT:0000042][accessDate: 04-11-2010]
MA:0000328
The anus is situated in a small area of membrane between the bases of the cerci.[accessedResource: TGMA:0001279][accessDate: 04-11-2010]
anal pad
cloaca[accessedResource: MAT:0000042][accessDate: 04-11-2010]
MAT:0000042
FBbt:00005785
Anal canal viewed anatomically[accessedResource: FMAID:15703][accessDate: 04-11-2010]
XAO:0000244
Anal canal viewed anatomically
anal pad[accessedResource: FBbt:00005785][accessDate: 04-11-2010]
cloaca
SAEL:5
James Malone
TGMA:0001279
cloacal chamber[accessedResource: MAT:0000042][accessDate: 04-11-2010]
Anatomical anal canal
anus
ZFA:0000330
FMAID:15703
WBbt:0005774
Anatomical anal canal[accessedResource: FMAID:15703][accessDate: 04-11-2010]
Organ with organ cavity which is continuous proximally with the rectum and distally terminates with the anus. Examples: There is only one anal canal.
EV:0100082
anal canal
EMAPA:16831
Tomasz Adamusiak
posterior lateral line placode
ZFA:0001156
corpus callosum
NCIt:C12446
BTO:0000615
The great band of commissural fibers uniting the cerebral hemispheres of higher mammals including humans.
The great band of commissural fibers uniting the cerebral hemispheres of higher mammals including humans.[accessedResource: BTO:0000615][accessDate: 04-11-2010]
A white matter structure within the cleft that separates the left and right cerebral hemispheres in the mammalian brain. It is composed of a wide, flat bundle of 200-250 million axonal projections.[accessedResource: NCIt:C12446][accessDate: 04-11-2010]
A white matter structure within the cleft that separates the left and right cerebral hemispheres in the mammalian brain. It is composed of a wide, flat bundle of 200-250 million axonal projections.
James Malone
prostate cancer
An adenocarcinoma arising from the prostate gland. It is one of the most common malignant tumors afflicting men. The majority of adenocarcinomas arise in the peripheral zone and a minority occurs in the central or the transitional zone of the prostate gland. Grading of prostatic adenocarcinoma predicts disease progression and correlates with survival. Several grading systems have been proposed, of which the Gleason system is the most commonly used. Gleason sums of 2 to 4 represent well-differentiated disease, 5 to 7 moderately differentiated disease and 8 to 10 poorly differentiated disease. Prostatic-specific antigen (PSA) serum test is widely used as a screening test for the early detection of prostatic adenocarcinoma. Treatment options include radical prostatectomy, radiation therapy, androgen ablation and cryotherapy. Watchful waiting or surveillance alone is an option for older patients with low-grade or low-stage disease.
GeneRIF:15381379
GeneRIF:11790779
GeneRIF:11813207
Adenocarcinoma of prostate[accessedResource: SNOMEDCT:399490008][accessDate: 04-11-2010]
GeneRIF:12865322
GeneRIF:14612932
Adenocarcinoma of prostate (disorder)
GeneRIF:15131044
DOID:2526
NCIt:C2919
GeneRIF:14559809
GeneRIF:15609334
GeneRIF:15138198
adenocarcinoma of prostate (disorder)[accessedResource: DOID:2526][accessDate: 04-11-2010]
GeneRIF:15256061
GeneRIF:11550208
GeneRIF:12664577
Adenocarcinoma of the Prostate
GeneRIF:16324197
GeneRIF:11023533
Adenocarcinoma of the Prostate[accessedResource: NCIt:C2919][accessDate: 04-11-2010]
SNOMEDCT:399490008
GeneRIF:15994952
GeneRIF:15073126
Adenocarcinoma of Prostate
GeneRIF:12433721
prostate adenocarcinoma
GeneRIF:15146458
GeneRIF:12115574
An adenocarcinoma arising from the prostate gland. It is one of the most common malignant tumors afflicting men. The majority of adenocarcinomas arise in the peripheral zone and a minority occurs in the central or the transitional zone of the prostate gland. Grading of prostatic adenocarcinoma predicts disease progression and correlates with survival. Several grading systems have been proposed, of which the Gleason system is the most commonly used. Gleason sums of 2 to 4 represent well-differentiated disease, 5 to 7 moderately differentiated disease and 8 to 10 poorly differentiated disease. Prostatic-specific antigen (PSA) serum test is widely used as a screening test for the early detection of prostatic adenocarcinoma. Treatment options include radical prostatectomy, radiation therapy, androgen ablation and cryotherapy. Watchful waiting or surveillance alone is an option for older patients with low-grade or low-stage disease.[accessedResource: NCIt:C2919][accessDate: 04-11-2010]
GeneRIF:15041704
GeneRIF:15665279
James Malone
James Malone
GLI56
anaplastic oligoastrocytoma (morphologic abnormality)[accessedResource: DOID:7306][accessDate: 04-11-2010]
anaplastic oligoastrocytoma
Ele Holloway
WHO grade III mixed glioma
DOID:7306
James Malone
anaplastic oligoastrocytoma (morphologic abnormality)
WHO grade III mixed glioma[accessedResource: DOID:7306][accessDate: 04-11-2010]
James Malone
FUM1 is a yeast strain as described in http://www.genedb.org/genedb/Search?organism=cerevisiae&name=YPL262W&isid=true
FUM1
http://www.genedb.org/genedb/Search?organism=cerevisiae&name=YPL262W&isid=true
Tomasz Adamusiak
lateral cord surface glia
FBbt:00005824
ventral cord[accessedResource: FBbt:00001102][accessDate: 04-11-2010]
The pair of closely united ventral longitudinal nerves with their segmental ganglia that is characteristic of many elongate invertebrates (as earthworms).[accessedResource: BTO:0002328][accessDate: 04-11-2010]
subesophageal + T1 + T2 + T3 + A1 + A2 + A3 + A4 + A5 + A6 + A7 + A8 ganglia[accessedResource: FBbt:00001102][accessDate: 04-11-2010]
The pair of closely united ventral longitudinal nerves with their segmental ganglia that is characteristic of many elongate invertebrates (as earthworms).
FBbt:00001102
.[accessedResource: FBbt:00001102][accessDate: 04-11-2010]
ventral nerve cord
MAT:0000339
larval ventral ganglion[accessedResource: FBbt:00001102][accessDate: 04-11-2010]
.
BTO:0002328
larval ventral ganglion
James Malone
subesophageal + T1 + T2 + T3 + A1 + A2 + A3 + A4 + A5 + A6 + A7 + A8 ganglia
ventral cord
James Malone
bladder mucosa
NCIt:C32205
methoprene
12627
32627
40596-69-8
C19H34O3
isopropyl (2E,4E)-11-methoxy-3,7,11-trimethyldodeca-2,4-dienoate
James Malone
blastula oblong
ZFS:0000013
Ele Holloway
James Malone
BeWo
SUM149PT
James Malone
James Malone
columnar neuron
CL:0000112
intermediolateral column motoneuron
Tomasz Adamusiak
head mesoderm anlage
FBbt:00005548
James Malone
true
1.5
Duplication with acute promyelocytic leukemia (EFO_0000224)
obsolete_promyelocytic leukemia
cyproheptadine hydrochloride
22586
4-(5H-dibenzo[a,d][7]annulen-5-ylidene)-1-methylpiperidine hydrochloride
42586
969-33-5
C21H22ClN
4-(5H-dibenzo[a,d]cyclohepten-5-ylidine)-methylpiperidine hydrochloride
James Malone
http://www.ebi.ac.uk/efo/EFO_0001727
true
A derived unit which is a standard measure of the dimension in which events occur in sequence.
A dervied time unit is a derived unit which is a standard measure of the dimension in which events occur in sequence.
derived time unit
UO:0000149
Acute Myelomonocytic Leukemia (FAB Type M4)
acute myelomonocytic leukemia
Tomasz Adamusiak
Acute M4 Myeloid Leukemia
Acute Myelomonocytic Leukemia (FAB Type M4)[accessedResource: NCIt:C7463][accessDate: 04-11-2010]
AMML[accessedResource: NCIt:C7463][accessDate: 04-11-2010]
An acute leukemia characterized by the proliferation of both neutrophil and monocyte precursors. Patients typically present with anemia, thrombocytopenia, fever and fatigue. This type of leukemia frequently responds to aggressive therapy. (WHO, 2001) -- 2003[accessedResource: NCIt:C7463][accessDate: 04-11-2010]
An acute leukemia characterized by the proliferation of both neutrophil and monocyte precursors. Patients typically present with anemia, thrombocytopenia, fever and fatigue. This type of leukemia frequently responds to aggressive therapy. (WHO, 2001) -- 2003
NCIt:C7463
AMML
Acute M4 Myeloid Leukemia[accessedResource: NCIt:C7463][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#innate_behavior_design[accessedResource: MO_355][accessDate: 04-11-2010]
Tomasz Adamusiak
innate behavior design
MO_355
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#innate_behavior_design
MO_488
A milliliter is a volume unit which is equal to one thousandth of a liter or 10^-3 L, or to 1 cubic centimeter.
milliliter
ml
Jie Zheng
Tomasz Adamusiak
A volume unit which is equal to one thousandth of a liter or 10^[-3] L, or to 1 cubic centimeter.
true
http://www.ebi.ac.uk/efo/EFO_0001712
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ml[accessedResource: MO_488][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ml
Neurons which activate muscle cells (MSH).[accessedResource: NIFSTD:sao1460710779][accessDate: 04-11-2010]
motor neuron
CL:0000100
anterior horn cell[accessedResource: CL:0000100][accessDate: 04-11-2010]
NIFSTD:sao1460710779
An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.
motoneuron[accessedResource: CL:0000100][accessDate: 04-11-2010]
anterior horn cell
Tomasz Adamusiak
Neurons which activate muscle cells (MSH).
motoneuron
An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.[accessedResource: CL:0000100][accessDate: 04-11-2010]
Sevofluranum
Ele Holloway
Tomasz Adamusiak
CHEBI:9130
FCOC(C(F)(F)F)C(F)(F)F
Sevofluran
InChIKey=DFEYYRMXOJXZRJ-UHFFFAOYAO
sevoflurane
C4H3F7O
Sevoflurano
InChI=1/C4H3F7O/c5-1-12-2(3(6,7)8)4(9,10)11/h2H,1H2
1,1,1,3,3,3-hexafluoro-2-(fluoromethoxy)propane
http://www.ebi.ac.uk/efo/EFO_0002733
An ether compound having fluoromethyl and 1,1,1,3,3,3-hexafluoroisopropyl as the two alkyl groups.
James Malone
Tomasz Adamusiak
129X1/SvJ is a substrain of the mouse strain 129 as described in Jackson Laboratory http://jaxmice.jax.org/strain/000691.html Note this strain was formerly called 129X1
129X1/SvJ
NIFSTD:birnlex_557
http://jaxmice.jax.org/strain/000691.html
129X1
James Malone
somatosensory cortex
NCI Metathesaurus: C0037658
James Malone
CS57785 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158809&type=germplasm
CS57785
http://www.arabidopsis.org/servlets/TairObject?id=1005158809&type=germplasm
Infiltrating Ductal and Lobular Carcinoma in situ[accessedResource: NCIt:C7689][accessDate: 10-05-2010]
Ductal Carcinoma in situ and Infiltrating Lobular Carcinoma
Lobular and ductal carcinoma[accessedResource: SNOMEDCT:35232005][accessDate: 10-05-2010]
Duplicate with invasive ductal and lobular carcinoma (EFO_0000552)
Non-Infiltrating Ductal Carcinoma and Infiltrating Lobular Carcinoma
Invasive Ductal and Lobular Carcinoma In Situ
Infiltrating duct and lobular carcinoma in situ
LCIS and Infiltrating Ductal Carcinoma
Infiltrating duct and lobular carcinoma (morphologic abnormality)
true
Invasive Ductal and Lobular Carcinoma In Situ[accessedResource: NCIt:C7689][accessDate: 10-05-2010]
Non-Infiltrating Ductal Carcinoma and ILC[accessedResource: NCIt:C6939][accessDate: 10-05-2010]
Infiltrating duct and lobular carcinoma in situ[accessedResource: SNOMEDCT:35232005][accessDate: 10-05-2010]
Intraductal and lobular carcinoma[accessedResource: SNOMEDCT:35232005][accessDate: 10-05-2010]
Non-Infiltrating Ductal Carcinoma and Infiltrating Lobular Carcinoma[accessedResource: NCIt:C6939][accessDate: 10-05-2010]
Lobular Carcinoma in situ and Invasive Ductal Carcinoma[accessedResource: NCIt:C7689][accessDate: 10-05-2010]
Ductal Carcinoma in situ and Infiltrating Lobular Carcinoma[accessedResource: NCIt:C6939][accessDate: 10-05-2010]
Infiltrating duct and lobular carcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:35232005][accessDate: 10-05-2010]
Infiltrating duct and lobular carcinoma[accessedResource: DOID:6582][accessDate: 10-05-2010]
Mixed Ductal and Lobular Breast Carcinoma
[M]Infiltrating duct and lobular carcinoma
ductal breast carcinoma In situ and Invasive Lobular carcinoma[accessedResource: DOID:6582][accessDate: 10-05-2010]
LCIS and Infiltrating Ductal Carcinoma[accessedResource: NCIt:C7689][accessDate: 10-05-2010]
ductal breast carcinoma In situ and Invasive Lobular carcinoma
NCIt:C5160
Lobular Carcinoma in situ and Invasive Ductal Carcinoma
obsolete_mixed lobular and ductal breast carcinoma
mixed Lobular and ductal carcinoma
Mixed Ductal and Lobular Carcinoma of Breast
Mixed Ductal and Lobular Carcinoma of the Breast
SNOMEDCT:35232005
DCIS and Infiltrating Lobular Carcinoma
Infiltrating duct and lobular carcinoma
DOID:6582
Mixed Ductal and Lobular Breast Carcinoma[accessedResource: NCIt:C5160][accessDate: 10-05-2010]
Intraductal and lobular carcinoma
NCIt:C7689
[M] Infiltrating duct and lobular carcinoma[accessedResource: SNOMEDCT:35232005][accessDate: 10-05-2010]
DCIS and ILC
Infiltrating Ductal and Lobular Carcinoma in situ
NCIt:C7690
Mixed Lobular and Ductal Carcinoma[accessedResource: NCIt:C5160][accessDate: 10-05-2010]
Non-Infiltrating Ductal Carcinoma and ILC
NCIt:C6939
James Malone
DCIS and Infiltrating Lobular Carcinoma[accessedResource: NCIt:C6939][accessDate: 10-05-2010]
Mixed Ductal and Lobular Carcinoma of the Breast[accessedResource: NCIt:C5160][accessDate: 10-05-2010]
Ductal and Lobular Carcinoma
Mixed Lobular and Ductal Carcinoma of Breast[accessedResource: NCIt:C5160][accessDate: 10-05-2010]
DCIS and ILC[accessedResource: NCIt:C6939][accessDate: 10-05-2010]
1.5
James Malone
T47D
(15Z)-12-oxophyto-10,15-dienoic acid
23705
43705
67204-66-4
8-{(1S,5S)-4-oxo-5-[(2Z)-pent-2-en-1-yl]cyclopent-2-en-1-yl}octanoic acid
C18H28O3
12-oxophytodienoic acid
Ele Holloway
James Malone
RERF-LC-AI
Tomasz Adamusiak
presumptive rhombomere 3
ZFA:0001213
James Malone
CS57807 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158831&type=germplasm
CS57807
http://www.arabidopsis.org/servlets/TairObject?id=1005158831&type=germplasm
SAEC is a cell line derived from Small Airway Epithelial Cells
SAEC
Tomasz Adamusiak
alopecia
DOID:987
adult muscle precursor specific anlage[accessedResource: FBbt:00005516][accessDate: 04-11-2010]
James Malone
adult muscle precursor primordium
FBbt:00005516
adult muscle precursor specific anlage
CL:0000553
megakaryocyte progenitor cell
The earliest cytologically identifiable precursor in the thrombocytic series. This cell is capable of endomitosis and lacks expression of hematopoieitic lineage markers (lin-negative).[accessedResource: CL:0000553][accessDate: 04-11-2010]
megakaryoblast[accessedResource: CL:0000553][accessDate: 04-11-2010]
megacaryoblast
megacaryoblast[accessedResource: CL:0000553][accessDate: 04-11-2010]
promegacaryocyte
megacaryocyte progenitor cell[accessedResource: CL:0000553][accessDate: 04-11-2010]
James Malone
megakaryoblast
promegakaryocyte[accessedResource: CL:0000553][accessDate: 04-11-2010]
megacaryocyte progenitor cell
promegakaryocyte
The earliest cytologically identifiable precursor in the thrombocytic series.
The earliest cytologically identifiable precursor in the thrombocytic series. This cell is capable of endomitosis and lacks expression of hematopoieitic lineage markers (lin-negative).
promegacaryocyte[accessedResource: CL:0000553][accessDate: 04-11-2010]
GeneRIF:14514642
DMII RENL NT ST UNCNTRLD
Nephrotic syndrome in diabetes mellitus
GeneRIF:16014032
GeneRIF:15915338
GeneRIF:15223229
Kimmelstiel - Wilson disease[accessedResource: SNOMEDCT:197605007][accessDate: 04-11-2010]
GeneRIF:15120704
GeneRIF:15793258
GeneRIF:12540629
Diabetic renal disease (disorder)
GeneRIF:15616804
GeneRIF:14586741
GeneRIF:15616035
GeneRIF:16301823
GeneRIF:14694018
GeneRIF:12086959
GeneRIF:12675860
GeneRIF:15790669
GeneRIF:15126006
GeneRIF:15745834
DOID:2370
GeneRIF:15610240
GeneRIF:14583183
GeneRIF:15489960
Diabetes with renal manifestations (disorder)[accessedResource: SNOMEDCT:21858001][accessDate: 04-11-2010]
GeneRIF:12911551
GeneRIF:14578305
GeneRIF:15957132
GeneRIF:14747236
GeneRIF:16164635
GeneRIF:15539010
Diabetic renal disease (disorder)[accessedResource: SNOMEDCT:127013003][accessDate: 04-11-2010]
GeneRIF:15322501
GeneRIF:11770799
GeneRIF:12630823
GeneRIF:14633859
GeneRIF:14610338
GeneRIF:15502921
SNOMEDCT:127013003
GeneRIF:12606536
GeneRIF:14748439
GeneRIF:15308130
GeneRIF:15345671
Diabetes mellitus type II [non-insulin dependent type] [NIDDM type] [adult-onset type] or unspecified type, not stated as uncontrolled, with renal manifestations
Diabetes with renal manifestations
SNOMEDCT:54181000
GeneRIF:12610055
Diabetes mellitus type II [non-insulin dependent type] [NIDDM type] [adult-onset type] or unspecified type, not stated as uncontrolled, with renal manifestations[accessedResource: ICD9:250.40][accessDate: 04-11-2010]
DMII RENL NT ST UNCNTRLD[accessedResource: ICD9:250.40][accessDate: 04-11-2010]
GeneRIF:16249462
GeneRIF:12032186
GeneRIF:12147787
Diabetes mellitus type II [non-insulin dependent type] [NIDDM type] [adult-onset type] or unspecified type, uncontrolled, with renal manifestations
Kimmelstiel - Wilson disease
GeneRIF:15946912
GeneRIF:12882872
Diabetes with renal manifestations[accessedResource: SNOMEDCT:21858001][accessDate: 04-11-2010]
GeneRIF:16211375
GeneRIF:12941731
GeneRIF:15286433
GeneRIF:15232685
DMII RENAL UNCNTRLD[accessedResource: ICD9:250.42][accessDate: 04-11-2010]
ICD9:250.40
GeneRIF:12938144
DMII RENAL UNCNTRLD
GeneRIF:12631336
GeneRIF:15327405
Diabetes-nephrosis syndrome (disorder)[accessedResource: SNOMEDCT:54181000][accessDate: 04-11-2010]
GeneRIF:15942051
GeneRIF:12171997
GeneRIF:14736962
GeneRIF:12147786
Diabetic renal disease[accessedResource: SNOMEDCT:127013003][accessDate: 04-11-2010]
GeneRIF:14674716
GeneRIF:14514644
Renal disorder associated with diabetes mellitus[accessedResource: SNOMEDCT:127013003][accessDate: 04-11-2010]
GeneRIF:15983323
GeneRIF:15047636
GeneRIF:12105259
GeneRIF:14747204
GeneRIF:12644472
GeneRIF:12500218
Nephrotic syndrome in diabetes mellitus[accessedResource: SNOMEDCT:197605007][accessDate: 04-11-2010]
Nephrotic syndrome in diabetes mellitus (disorder)
Diabetes-nephrosis syndrome
Renal disorder associated with diabetes mellitus
GeneRIF:12897091
GeneRIF:15830182
GeneRIF:15496156
GeneRIF:12757981
GeneRIF:14633865
GeneRIF:15888973
GeneRIF:15153757
GeneRIF:12413777
GeneRIF:15600254
Diabetic renal disease
GeneRIF:11845237
Nephrotic syndrome in diabetes mellitus (disorder)[accessedResource: SNOMEDCT:197605007][accessDate: 04-11-2010]
GeneRIF:12446618
GeneRIF:15983219
GeneRIF:15780082
GeneRIF:12722028
SNOMEDCT:21858001
GeneRIF:12505748
GeneRIF:12187087
diabetic nephropathy
Diabetes with renal manifestations (disorder)
GeneRIF:16164625
GeneRIF:12200076
GeneRIF:15016802
GeneRIF:15052533
GeneRIF:14521940
James Malone
Diabetes-nephrosis syndrome (disorder)
GeneRIF:14531794
ICD9:250.4
GeneRIF:16091581
Diabetes-nephrosis syndrome[accessedResource: SNOMEDCT:54181000][accessDate: 04-11-2010]
GeneRIF:16249547
GeneRIF:14694017
GeneRIF:12874455
Diabetes mellitus type II [non-insulin dependent type] [NIDDM type] [adult-onset type] or unspecified type, uncontrolled, with renal manifestations[accessedResource: ICD9:250.42][accessDate: 04-11-2010]
ICD9:250.42
GeneRIF:11940319
GeneRIF:12784186
SNOMEDCT:197605007
GeneRIF:15562008
GeneRIF:15983325
GeneRIF:12436341
James Malone
adult hindgut precursor
FBbt:00005646
cHL
1.5
Classical Hodgkin's Lymphoma
true
A monoclonal B-cell lymphoproliferation in the vast majority of cases. It is characterized by a bimodal age distribution (15-30 years of life and late life) and is often associated with EBV infection. In less than 5% of cases it is a monoclonal proliferation of T-lymphocytes. Morphologically, it is characterized by the presence of Reed-Sternberg cells and mononuclear Hodgkin cells. The Reed-Sternberg and mononuclear Hodgkin cells are CD30 positive in nearly all cases and CD15 positive in the majority of cases.[accessedResource: C7164][accessDate: 10-05-2010]
Classical Hodgkin Lymphoma[accessedResource: C7164][accessDate: 10-05-2010]
C7164
A monoclonal B-cell lymphoproliferation in the vast majority of cases. It is characterized by a bimodal age distribution (15-30 years of life and late life) and is often associated with EBV infection. In less than 5% of cases it is a monoclonal proliferation of T-lymphocytes. Morphologically, it is characterized by the presence of Reed-Sternberg cells and mononuclear Hodgkin cells. The Reed-Sternberg and mononuclear Hodgkin cells are CD30 positive in nearly all cases and CD15 positive in the majority of cases.
obsolete_classical Hodgkin's lymphoma
Duplicate with Hodgkin's lymphoma (EFO_0000183)
CHL[accessedResource: C7164][accessDate: 10-05-2010]
Classical Hodgkin's Lymphoma[accessedResource: C7164][accessDate: 10-05-2010]
Classical Hodgkin Lymphoma
James Malone
James Malone
CS57644 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158668&type=germplasm
CS57644
http://www.arabidopsis.org/servlets/TairObject?id=1005158668&type=germplasm
InChIKey=XAUDJQYHKZQPEU-BRLQTKNBDS
A 2'-deoxyribonucleoside that has formula C8H12N4O4.
5-azadeoxycytidine
4-amino-1-(2-deoxy-beta-D-erythro-pentofuranosyl)-s-triazin-2(1H)-one
InChI=1/C8H12N4O4/c9-7-10-3-12(8(15)11-7)6-1-4(14)5(2-13)16-6/h3-6,13-14H,1-2H2,(H2,9,11,15)/t4-,5+,6+/m0/s1/f/h9H2
CHEBI:50131
http://www.ebi.ac.uk/efo/EFO_0001473
4-amino-1-(2-deoxy-beta-D-erythro-pentofuranosyl)-1,3,5-triazin-2(1H)-one
Nc1ncn([C@H]2C[C@H](O)[C@@H](CO)O2)c(=O)n1
5-aza-2'-deoxycytidine
C8H12N4O4
decitabine
ENCODE functional genome mapping
Sclerosis, Progressive Systemic
diffuse scleroderma
MSH:D045743
diffuse systemic sclerosis[accessedResource: DOID:1580][accessDate: 04-11-2010]
A rapid onset form of SYSTEMIC SCLERODERMA with progressive widespread SKIN thickening over the arms, the legs and the trunk, resulting in stiffness and disability.[accessedResource: MSH:D045743][accessDate: 04-11-2010]
James Malone
GeneRIF:16320328
Diffuse systemic sclerosis
A rapid onset form of SYSTEMIC SCLERODERMA with progressive widespread SKIN thickening over the arms, the legs and the trunk, resulting in stiffness and disability.
Diffuse cutaneous systemic sclerosis
DOID:1580
Diffuse cutaneous scleroderma
Diffuse cutaneous systemic sclerosis[accessedResource: SNOMEDCT:128460000][accessDate: 04-11-2010]
Progressive Scleroderma
Diffuse cutaneous scleroderma[accessedResource: SNOMEDCT:128460000][accessDate: 04-11-2010]
systemic sclerosis, diffuse (disorder)[accessedResource: DOID:1580][accessDate: 04-11-2010]
Progressive Scleroderma[accessedResource: MSH:D045743][accessDate: 04-11-2010]
systemic sclerosis, diffuse (disorder)
Systemic Sclerosis, Progressive[accessedResource: MSH:D045743][accessDate: 04-11-2010]
SNOMEDCT:128460000
An assay where proteins in a sample are detected, quantified or otherwise analysed using mass spectrometry
proteomic profiling by mass spectrometer
A poorly differentiated liposarcoma, characterized by the presence of solid sheets of primitive round mesenchymal cells and the absence of myxoid stroma.[accessedResource: NCIt:C4252][accessDate: 04-11-2010]
Cellular Myxoid Liposarcoma[accessedResource: NCIt:C4252][accessDate: 04-11-2010]
Tomasz Adamusiak
A poorly differentiated liposarcoma, characterized by the presence of solid sheets of primitive round mesenchymal cells and the absence of myxoid stroma.
round cell liposarcoma
NCIt:C4252
Cellular Myxoid Liposarcoma
Mitochondrial Myopathy, Lactic Acidosis, Stroke-Like Episode
MSH:D017241
A mitochondrial disorder characterized by focal or generalized seizures, episodes of transient or persistent neurologic dysfunction resembling strokes, and ragged-red fibers on muscle biopsy. Affected individuals tend to be normal at birth through early childhood, then experience growth failure, episodic vomiting, and recurrent cerebral insults resulting in visual loss and hemiparesis. The cortical lesions tend to occur in the parietal and occipital lobes and are not associated with vascular occlusion. VASCULAR HEADACHE is frequently associated and the disorder tends to be familial. (From Joynt, Clinical Neurology, 1992, Ch56, p117)
GeneRIF:15466014
MELAS syndrome
DOID:3687
MELAS[accessedResource: MSH:D017241][accessDate: 04-11-2010]
Mitochondrial Myopathy, Lactic Acidosis, Stroke-Like Episode[accessedResource: MSH:D017241][accessDate: 04-11-2010]
MELAS
James Malone
A mitochondrial disorder characterized by focal or generalized seizures, episodes of transient or persistent neurologic dysfunction resembling strokes, and ragged-red fibers on muscle biopsy. Affected individuals tend to be normal at birth through early childhood, then experience growth failure, episodic vomiting, and recurrent cerebral insults resulting in visual loss and hemiparesis. The cortical lesions tend to occur in the parietal and occipital lobes and are not associated with vascular occlusion. VASCULAR HEADACHE is frequently associated and the disorder tends to be familial. (From Joynt, Clinical Neurology, 1992, Ch56, p117)[accessedResource: MSH:D017241][accessDate: 04-11-2010]
Ele Holloway
James Malone
NCI-H1770
A liposarcoma with areas of pleomorphism, resembling malignant fibrous histiocytoma. It is the rarest liposarcoma variant and usually has an aggressive clinical course.[accessedResource: NCIt:C3705][accessDate: 04-11-2010]
Tomasz Adamusiak
Pleomorphic liposarcoma (morphologic abnormality)
pleomorphic liposarcoma
DOID:5702
Pleomorphic liposarcoma (disorder)
A liposarcoma with areas of pleomorphism, resembling malignant fibrous histiocytoma. It is the rarest liposarcoma variant and usually has an aggressive clinical course.
Pleomorphic liposarcoma (disorder)[accessedResource: DOID:5702][accessDate: 04-11-2010]
Pleomorphic liposarcoma (morphologic abnormality)[accessedResource: DOID:5702][accessDate: 04-11-2010]
NCIt:C3705
Tomasz Adamusiak
posterior lateral mesoderm
ZFA:0005040
James Malone
CS57828 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158852&type=germplasm
CS57828
http://www.arabidopsis.org/servlets/TairObject?id=1005158852&type=germplasm
Extra-Adrenal Sympathetic Paraganglionic Neoplasm[accessedResource: NCIt:C48576][accessDate: 04-11-2010]
Extra-Adrenal Chromaffin Neoplasm[accessedResource: NCIt:C48576][accessDate: 04-11-2010]
Extraadrenal Pheochromocytoma
A benign or malignant sympathetic paraganglioma arising from paraganglia outside the adrenal gland. Clinical symptoms are related to secretion of catecholamines. Representative examples include the superior and inferior paraaortic and bladder paragangliomas.
Extra-Adrenal Pheochromocytoma[accessedResource: NCIt:C48576][accessDate: 04-11-2010]
A benign or malignant sympathetic paraganglioma arising from paraganglia outside the adrenal gland. Clinical symptoms are related to secretion of catecholamines. Representative examples include the superior and inferior paraaortic and bladder paragangliomas.[accessedResource: NCIt:C48576][accessDate: 04-11-2010]
James Malone
NCIt:C48576
Extra-Adrenal Pheochromocytoma
extra-adrenal sympathetic paraganglioma
Extra-Adrenal Chromaffin Neoplasm
Extraadrenal Pheochromocytoma[accessedResource: NCIt:C48576][accessDate: 04-11-2010]
Extra-Adrenal Sympathetic Paraganglionic Neoplasm
Extra-Adrenal Chromaffinoma[accessedResource: NCIt:C48576][accessDate: 04-11-2010]
Extra-Adrenal Chromaffinoma
James Malone
GM12154
Tomasz Adamusiak
ILSXISS122/TejJ
http://jaxmice.jax.org/strain/009294.html
otic vesicle
auris
MAT:0000138
otic vesicle[accessedResource: MAT:0000138][accessDate: 04-11-2010]
EV:0100353
auditory apparatus
FMAID:52780
ear
TAO:0001138
AAO:0000631
vestibuloauditory system[accessedResource: TAO:0001138][accessDate: 04-11-2010]
vestibuloauditpry system[accessedResource: MAT:0000138][accessDate: 04-11-2010]
BTO:0000368
ZFA:0001138
MFO:0003660
vestibuloauditory system
auris[accessedResource: BTO:0000368][accessDate: 04-11-2010]
XAO:0000189
auditory system
auditory system[accessedResource: MAT:0000138][accessDate: 04-11-2010]
auditory apparatus[accessedResource: MAT:0000138][accessDate: 04-11-2010]
James Malone
EMAPA:16193
The organ of hearing.
NIFSTD:birnlex_1062
vestibuloauditpry system
MA:0000236
The organ of hearing.[accessedResource: BTO:0000368][accessDate: 04-11-2010]
Tomasz Adamusiak
EHDAA:502
Medial geniculate complex
Medial geniculate nuclei
Medial geniculate complex[accessedResource: FMA:62211][accessDate: 04-11-2010]
James Malone
Medial geniculate body
MA:0000870
FMA:62211
Medial geniculate body[accessedResource: FMA:62211][accessDate: 04-11-2010]
Medial geniculate nuclei[accessedResource: FMA:62211][accessDate: 04-11-2010]
medial geniculate nucleus
MGN
James Malone
true
anatomy basic component
MAT:0000000
Tomasz Adamusiak
embryonic labial sensory complex
FBbt:00005619
Jie Zheng
Tomasz Adamusiak
substantia nigra and ventral tegmental area
normal cell line
Tomasz Adamusiak
basibranchial
ZFA:0000170
meristem
Meristem is a plant component consisting of undifferentiated plant issue - the botanical equivalent of animal stem cells.
James Malone
Undifferentiated plant issue - the botanical equivalent of animal stem cells[accessedResource: MAT:0000006][accessDate: 04-11-2010]
BTO:0000852
MAT:0000006
Undifferentiated plant issue - the botanical equivalent of animal stem cells
A formative plant tissue usually made up of small cells capable of dividing indefinitely and giving rise to similar cells or to cells that differentiate to produce the definitive tissues and organs.[accessedResource: BTO:0000852][accessDate: 04-11-2010]
PO:0009013
A formative plant tissue usually made up of small cells capable of dividing indefinitely and giving rise to similar cells or to cells that differentiate to produce the definitive tissues and organs.
Ele Holloway
James Malone
MG63
CHEBI:4356
Deferrioxamine
N'-{5-[acetyl(hydroxy)amino]pentyl}-N-(5-{4-[(5-aminopentyl)(hydroxy)amino]-4-oxobutanamido}pentyl)-N-hydroxybutanediamide
deferoxamina
C25H48N6O8
Desferrioxamine
InChI=1/C25H48N6O8/c1-21(32)29(37)18-9-3-6-16-27-22(33)12-14-25(36)31(39)20-10-4-7-17-28-23(34)11-13-24(35)30(38)19-8-2-5-15-26/h37-39H,2-20,26H2,1H3,(H,27,33)(H,28,34)/f/h27-28H
CC(=O)N(O)CCCCCNC(=O)CCC(=O)N(O)CCCCCNC(=O)CCC(=O)N(O)CCCCCN
deferoxaminum
DFO
deferoxamine
InChIKey=UBQYURCVBFRUQT-VEORKLDJCD
Deferoxamin
deferrioxamine B
desferrioxamine B
An acyclic desferrioxamine that has formula C25H48N6O8.
http://www.ebi.ac.uk/efo/EFO_0001518
FET GRWTH RET 1000-1249G
FET GRWTH RET 1000-1249G[accessedResource: ICD9:764.94][accessDate: 04-11-2010]
GeneRIF:11809917
Microsomia
ICD9:764.95
Fetal growth retardation, unspecified, 1,500-1,749 grams[accessedResource: ICD9:764.96][accessDate: 04-11-2010]
FET GROWTH RET 750-999G
Poor fetal growth state
Fetal growth retardation, unspecified, 2,500+ grams
FET GROWTH RET 2500+G
Fetal growth retardation, unspecified, 500-749 grams[accessedResource: ICD9:764.92][accessDate: 04-11-2010]
FET GROWTH RETARD WTNOS[accessedResource: ICD9:764.90][accessDate: 04-11-2010]
Fetal growth retardation, NOS
FET GRWTH RET 2000-2499G[accessedResource: ICD9:764.98][accessDate: 04-11-2010]
ICD9:764.98
ICD9:764.96
FET GROWTH RETARD <500G[accessedResource: ICD9:764.91][accessDate: 04-11-2010]
Poor fetal growth[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
Fetal growth retardation, unspecified, 1,750-1,999 grams[accessedResource: ICD9:764.97][accessDate: 04-11-2010]
FET GRWTH RET 1500-1749G[accessedResource: ICD9:764.96][accessDate: 04-11-2010]
Fetal growth retardation, unspecified [weight]
SNOMEDCT:268815007
Fetal growth retardation (disorder)[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
Fetal growth retardation, unspecified, 500-749 grams
GeneRIF:12376298
Fetal growth retardation, unspecified, 1,000-1,249 grams
Fetal growth retardation, unspecified, 1,250-1,499 grams
FET GRWTH RET 1250-1499G[accessedResource: ICD9:764.95][accessDate: 04-11-2010]
James Malone
Intrauterine growth retardation, NOS[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
Fetal growth retardation, unspecified, 750-999 grams[accessedResource: ICD9:764.93][accessDate: 04-11-2010]
GeneRIF:11903419
FET GRWTH RET 1750-1999G
Fetal Growth Retardation
Intrauterine growth retardation
Fetal growth retardation[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
Fetal growth retardation, unspecified, 1,500-1,749 grams
Fetal growth retardation, unspecified, 2,000-2,499 grams[accessedResource: ICD9:764.98][accessDate: 04-11-2010]
Poor fetal growth state[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
IUGR - Intrauterine growth retardation
FET GROWTH RETARD <500G
Microsomic baby
Fetal growth retardation, unspecified, 750-999 grams
GeneRIF:12576245
Foetal growth retardation, NOS
ICD9:764.93
FET GROWTH RET 2500+G[accessedResource: ICD9:764.99][accessDate: 04-11-2010]
ICD9:764.94
ICD9:764.91
FET GRWTH RET 2000-2499G
Fetal growth retardation, unspecified, 2,500+ grams[accessedResource: ICD9:764.99][accessDate: 04-11-2010]
Fetal growth retardation, unspecified, less than 500 grams[accessedResource: ICD9:764.91][accessDate: 04-11-2010]
GeneRIF:11738800
Poor fetal growth
FET GRWTH RET 1250-1499G
SNOMEDCT:22033007
ICD9:764.9
Fetal growth retardation NOS (disorder)
GeneRIF:12362237
Fetal growth retardation, unspecified
GeneRIF:15695771
GeneRIF:15712600
GeneRIF:14692644
Fetal growth retardation, unspecified, 1,750-1,999 grams
Fetal growth retardation, unspecified, 1,000-1,249 grams[accessedResource: ICD9:764.94][accessDate: 04-11-2010]
Microsomic baby[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
FET GROWTH RET 500-749G
GeneRIF:12832488
DOID:13294
Fetal growth retardation (disorder)
Microsomia[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
Intrauterine growth retardation, NOS
Fetal growth retardation NOS (disorder)[accessedResource: SNOMEDCT:268815007][accessDate: 04-11-2010]
GeneRIF:15166008
FET GROWTH RET 500-749G[accessedResource: ICD9:764.92][accessDate: 04-11-2010]
Foetal growth retardation, NOS[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
Fetal growth retardation, unspecified, 1,250-1,499 grams[accessedResource: ICD9:764.95][accessDate: 04-11-2010]
FET GROWTH RETARD WTNOS
GeneRIF:14688210
FET GRWTH RET 1500-1749G
GeneRIF:12072378
FET GROWTH RET 750-999G[accessedResource: ICD9:764.93][accessDate: 04-11-2010]
GeneRIF:11924936
GeneRIF:15371566
FET GRWTH RET 1750-1999G[accessedResource: ICD9:764.97][accessDate: 04-11-2010]
Intrauterine growth retardation[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
GeneRIF:11738801
ICD9:764.99
GeneRIF:15625086
GeneRIF:12433638
ICD9:764.92
ICD9:764.97
ICD9:764.90
FGR - Fetal growth retardation
Fetal growth retardation, unspecified, 2,000-2,499 grams
FGR - Fetal growth retardation[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
Fetal growth retardation NOS[accessedResource: SNOMEDCT:268815007][accessDate: 04-11-2010]
Fetal growth retardation, unspecified, less than 500 grams
GeneRIF:12920078
Fetal growth retardation, unspecified [weight][accessedResource: ICD9:764.90][accessDate: 04-11-2010]
IUGR - Intrauterine growth retardation[accessedResource: SNOMEDCT:22033007][accessDate: 04-11-2010]
fetal growth restriction
Fetal growth retardation, unspecified[accessedResource: ICD9:764.9][accessDate: 04-11-2010]
GeneRIF:12788896
James Malone
The scalar number of injections administered to a material or organism.
number of injections
James Malone
Ele Holloway
nebivolol
Tomasz Adamusiak
CASRN:99200-09-6
STRUCTURE_Formula:C22H25F2NO4
STRUCTURE_ChemicalName_IUPAC:2,2'-iminobis[1-(6-fluoro-3,4-dihydro-2H-chromen-2-yl)ethanol]
DSSTox_Generic_SID:40556
DSSTox_CID:20556
Tomasz Adamusiak
Ele Holloway
DSSTox_CID:42611
CASRN:300561-58-4
James Malone
DSSTox_Generic_SID:C19H22BrNO2
SKF 77434 hydrobromide
STRUCTURE_Formula:1-phenyl-3-prop-2-en-1-yl-2,3,4,5-tetrahydro-1H-3-benzazepine-7,8-diol hydrobromide
The mucous membrane lining the uterus.[accessedResource: BTO:0001422][accessDate: 04-11-2010]
uterine endometrium
James Malone
Tunica mucosa (Endometrium)
endometrium
MAT:0000319
FMAID:17742
uterine endometrium[accessedResource: BTO:0001422][accessDate: 04-11-2010]
BTO:0001422
Tunica mucosa (Endometrium)[accessedResource: FMAID:17742][accessDate: 04-11-2010]
EV:0100115
The mucous membrane lining the uterus.
James Malone
CS57751 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158775&type=germplasm
CS57751
http://www.arabidopsis.org/servlets/TairObject?id=1005158775&type=germplasm
strontium chloride
10476-85-4
20616
40616
Cl2Sr
strontium dichloride
scales
MAT:0000257
ZFA:0000277
Jie Zheng
Dermal bone that is thin, flexible, and platelike, and that develops in overlapping skinfolds that cover the body and often the head of fish and the bases of the fins.[accessedResource: ZFA:0000277][accessDate: 04-11-2010]
Dermal bone that is thin, flexible, and platelike, and that develops in overlapping skinfolds that cover the body and often the head of fish and the bases of the fins.
MO_108
scale
Tomasz Adamusiak
scales[accessedResource: ZFA:0000277][accessDate: 04-11-2010]
OntologyMappingImporter following MAT:0000257
James Malone
Tomasz Adamusiak
somite 5
ZFA:0000073
James Malone
CS57705 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158729&type=germplasm
CS57705
http://www.arabidopsis.org/servlets/TairObject?id=1005158729&type=germplasm
[M]Liposarcoma NOS
Liposarcoma, Pleomorphic[accessedResource: MSH:D008080][accessDate: 04-11-2010]
Fibroliposarcoma
[M]Liposarcoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189777004][accessDate: 04-11-2010]
Liposarcoma (disorder)
Liposarcomas[accessedResource: MSH:D008080][accessDate: 04-11-2010]
A malignant tumor derived from primitive or embryonal lipoblastic cells. It may be composed of well-differentiated fat cells or may be dedifferentiated: myxoid (LIPOSARCOMA, MYXOID), round-celled, or pleomorphic, usually in association with a rich network of capillaries. Recurrences are common and dedifferentiated liposarcomas metastasize to the lungs or serosal surfaces. (From Dorland, 27th ed; Stedman, 25th ed)
Tomasz Adamusiak
SNOMEDCT:254829001
NCIt:C3194
Liposarcoma, NOS[accessedResource: SNOMEDCT:49430005][accessDate: 04-11-2010]
[M]Liposarcoma NOS (morphologic abnormality)
SNOMEDCT:49430005
Liposarcoma (disorder)[accessedResource: SNOMEDCT:254829001][accessDate: 04-11-2010]
Liposarcoma, no ICD-O subtype
Pleomorphic Liposarcoma
GeneRIF:15201968
Liposarcomas
GeneRIF:14989736
Liposarcoma, no ICD-O subtype[accessedResource: SNOMEDCT:49430005][accessDate: 04-11-2010]
Liposarcoma, Dedifferentiated
A malignant lipomatous neoplasm that arises in fat cells in deep soft tissue retroperitoneum.[accessedResource: DOID:3382][accessDate: 04-11-2010]
James Malone
SNOMEDCT:189777004
A usually painless malignant tumor that arises from adipose tissue. Microscopically, it may contain a spectrum of neoplastic adipocytes ranging from lipoblasts to pleomorphic malignant adipocytes. Representative morphologic variants include: well differentiated, dedifferentiated, pleomorphic, and myxoid/round cell liposarcoma. The metastatic potential is higher in less differentiated tumors.
MSH:D008080
Liposarcoma morphology
Liposarcoma (morphologic abnormality)
liposarcoma
Liposarcoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:49430005][accessDate: 04-11-2010]
Fibroliposarcoma[accessedResource: SNOMEDCT:49430005][accessDate: 04-11-2010]
GeneRIF:15149855
Liposarcoma NOS (morphologic abnormality)
Liposarcoma, no ICD-O subtype (morphologic abnormality)
Dedifferentiated Liposarcoma[accessedResource: MSH:D008080][accessDate: 04-11-2010]
Pleomorphic Liposarcomas[accessedResource: MSH:D008080][accessDate: 04-11-2010]
A malignant lipomatous neoplasm that arises in fat cells in deep soft tissue retroperitoneum.
Liposarcoma (morphologic abnormality)[accessedResource: SNOMEDCT:49430005][accessDate: 04-11-2010]
Liposarcoma morphology[accessedResource: SNOMEDCT:49430005][accessDate: 04-11-2010]
Dedifferentiated Liposarcomas
A malignant tumor derived from primitive or embryonal lipoblastic cells. It may be composed of well-differentiated fat cells or may be dedifferentiated: myxoid (LIPOSARCOMA, MYXOID), round-celled, or pleomorphic, usually in association with a rich network of capillaries. Recurrences are common and dedifferentiated liposarcomas metastasize to the lungs or serosal surfaces. (From Dorland, 27th ed; Stedman, 25th ed)[accessedResource: MSH:D008080][accessDate: 04-11-2010]
Liposarcoma, NOS
DOID:3382
[M]Liposarcoma NOS[accessedResource: SNOMEDCT:189777004][accessDate: 04-11-2010]
A usually painless malignant tumor that arises from adipose tissue. Microscopically, it may contain a spectrum of neoplastic adipocytes ranging from lipoblasts to pleomorphic malignant adipocytes. Representative morphologic variants include: well differentiated, dedifferentiated, pleomorphic, and myxoid/round cell liposarcoma. The metastatic potential is higher in less differentiated tumors.[accessedResource: NCIt:C3194][accessDate: 04-11-2010]
Liposarcomas, Dedifferentiated[accessedResource: MSH:D008080][accessDate: 04-11-2010]
Pleomorphic Liposarcomas
Liposarcoma NOS (morphologic abnormality)[accessedResource: DOID:3382][accessDate: 04-11-2010]
Tomasz Adamusiak
zebrafish component
SNOMEDCT:279108008
Geniculate nucleus (body structure)[accessedResource: SNOMEDCT:279108008][accessDate: 04-11-2010]
James Malone
Tomasz Adamusiak
geniculate nucleus
Geniculate nucleus (body structure)
HCC827
reticulum cell[accessedResource: CL:0000432][accessDate: 04-11-2010]
reticular cell[accessedResource: BTO:0002042][accessDate: 04-11-2010]
CL:0000451
Large, stellate fibroblast found along the network of collagen fibers of the reticulum of the spleen; synthesize the matrix components of the reticulum.
Tomasz Adamusiak
interdigitating cell
A special type of cell that is a key regulator of the immune system, acting as a professional antigen-presenting cell (APC) capable of activating naive T cells and stimulating the growth and differentiation of B cells. Dendritic cells are found, for example, in the lymph nodes and spleen. As an APC, a dendritic cell can retain antigen for long periods on its surface, present the antigen to a T or B cell and so influence their behavior.[accessedResource: BTO:0002042][accessDate: 04-11-2010]
veiled cell
CL:0000451
Large, stellate fibroblast found along the network of collagen fibers of the reticulum of the spleen; synthesize the matrix components of the reticulum.[accessedResource: CL:0000432][accessDate: 04-11-2010]
dendritic cell
BTO:0002042
CL:0000432
reticulum cell
A cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.[accessedResource: CL:0000451][accessDate: 04-11-2010]
A special type of cell that is a key regulator of the immune system, acting as a professional antigen-presenting cell (APC) capable of activating naive T cells and stimulating the growth and differentiation of B cells. Dendritic cells are found, for example, in the lymph nodes and spleen. As an APC, a dendritic cell can retain antigen for long periods on its surface, present the antigen to a T or B cell and so influence their behavior.
A cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.
veiled cell[accessedResource: CL:0000451][accessDate: 04-11-2010]
CL:0000451[accessedResource: BTO:0002042][accessDate: 04-11-2010]
James Malone
reticular cell
interdigitating cell[accessedResource: CL:0000451][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
Theiler stage 26
birnlex_7081
Human Gingival Fibroblasts
A HGF is a cell line.
A HGF is all of the following: something that has as quality a normal, something that derives from a Homo
sapiens, and something that derives from a fibroblast.
Natural Language Generator 8th April 2010
HGF
James Malone
FMAID:70323
cutis
MAT:0000153
BTO:0000294
Dense irregular connective tissue which consists of a papillary layer and a reticular layer.
SAEL:27
corium
dermis
The sensitive vascular inner mesodermic layer of the skin.[accessedResource: BTO:0000294][accessDate: 04-11-2010]
James Malone
cutis[accessedResource: BTO:0000294][accessDate: 04-11-2010]
MA:0000152
The sensitive vascular inner mesodermic layer of the skin.
ZFA:0001119
XAO:0000217
EV:0100154
corium[accessedResource: BTO:0000294][accessDate: 04-11-2010]
A collagenous layer of the skin subjacent to the epidermis and covering the hypodermis. It contains various types of cells (e.g. fibroblasts, pigment cells, nerve, blood vessels and scales.[accessedResource: ZFA:0001119][accessDate: 04-11-2010]
A collagenous layer of the skin subjacent to the epidermis and covering the hypodermis. It contains various types of cells (e.g. fibroblasts, pigment cells, nerve, blood vessels and scales.
AAO:0000128
EMAPA:17527
CHEBI:38462
acetylcholine esterase inhibitor
AChEI
acetylcholinesterase inhibitor
James Malone
acetylcholinesterase inhibitors
Any substance that inhibits the enzyme acetylcholinesterase from breaking down acetylcholine into choline and acetic acid.
http://www.ebi.ac.uk/efo/EFO_0001868
James Malone
CS57630 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158654&type=germplasm
CS57630
http://www.arabidopsis.org/servlets/TairObject?id=1005158654&type=germplasm
Familial cardiomyopathy (disorder)[accessedResource: SNOMEDCT:35728003][accessDate: 04-11-2010]
Primary familial cardiomyopathy[accessedResource: SNOMEDCT:35728003][accessDate: 04-11-2010]
Tomasz Adamusiak
familial cardiomyopathy
SNOMEDCT:35728003
Familial cardiomyopathy (disorder)
Primary familial cardiomyopathy
ethylene glycol
107-21-1
20597
597
C2H6O2
ethylene glycol
Ele Holloway
James Malone
SKLMS1
James Malone
ZF4
melanophore[accessedResource: CL:0000148][accessDate: 04-11-2010]
An epidermal cell that produces melanin.[accessedResource: BTO:0000847][accessDate: 04-11-2010]
A pigment cell derived from the neural crest. Contains melanin-filled pigment granules, which gives a brown to black appearance.
BTO:0000847
An epidermal cell that produces melanin.
Tomasz Adamusiak
CL:0000148
melanophore
A pigment cell derived from the neural crest. Contains melanin-filled pigment granules, which gives a brown to black appearance.[accessedResource: CL:0000148][accessDate: 04-11-2010]
melanocyte
GeneRIF:12855642
GeneRIF:12807720
polyp (morphologic abnormality)[accessedResource: DOID:3475][accessDate: 04-11-2010]
GeneRIF:15017003
GeneRIF:15489648
Polyps[accessedResource: MSH:D011127][accessDate: 04-11-2010]
polyps
A usually exophytic mass attached to the underlying tissue by a broad base or a thin stalk. Polyps can be neoplastic or non-neoplastic. Neoplastic polyps usually represent proliferations of the epithelium, and are commonly seen in the gastrointestinal tract. Polyps of the gastrointestinal tract are often called adenomas, are associated with dysplasia, and may eventually transform into carcinomas. Non-neoplastic polyps may be inflammatory, degenerative, or the result of malformations.[accessedResource: NCIt:C3340][accessDate: 04-11-2010]
GeneRIF:12151354
GeneRIF:12218179
Discrete abnormal tissue masses that protrude into the lumen of the DIGESTIVE TRACT or the RESPIRATORY TRACT. Polyps can be spheroidal, hemispheroidal, or irregular mound-shaped structures attached to the MUCOUS MEMBRANE of the lumen wall either by a stalk, pedunculus, or by a broad base.[accessedResource: MSH:D011127][accessDate: 04-11-2010]
A usually exophytic mass attached to the underlying tissue by a broad base or a thin stalk. Polyps can be neoplastic or non-neoplastic. Neoplastic polyps usually represent proliferations of the epithelium, and are commonly seen in the gastrointestinal tract. Polyps of the gastrointestinal tract are often called adenomas, are associated with dysplasia, and may eventually transform into carcinomas. Non-neoplastic polyps may be inflammatory, degenerative, or the result of malformations.
DOID:3475
James Malone
polyp (morphologic abnormality)
GeneRIF:12841871
MSH:D011127
Discrete abnormal tissue masses that protrude into the lumen of the DIGESTIVE TRACT or the RESPIRATORY TRACT. Polyps can be spheroidal, hemispheroidal, or irregular mound-shaped structures attached to the MUCOUS MEMBRANE of the lumen wall either by a stalk, pedunculus, or by a broad base.
GeneRIF:11932925
NCIt:C3340
GeneRIF:12970739
GeneRIF:12916705
A usually exophytic mass attached to the underlying tissue by a broad base or a thin stalk. Polyps can be neoplastic or non-neoplastic. Neoplastic polyps usually represent proliferations of the epithelium, and are commonly seen in the gastrointestinal tract. Polyps of the gastrointestinal tract are often called adenomas, are associated with dysplasia, and may eventually transform into carcinomas. Non-neoplastic polyps may be inflammatory, degenerative, or the result of malformations. -- 2004
polyp
GeneRIF:12351556
One of the modified leaves comprising a calyx.[accessedResource: BTO:0001547][accessDate: 04-11-2010]
One of the modified leaves comprising a calyx.
GRO:0005655
MAT:0000355
James Malone
PO:0009031
sepal
BTO:0001547
GRO:0005655[accessedResource: BTO:0001547][accessDate: 04-11-2010]
potassium dichromate
25948
5948
7778-50-9
Cr2K2O7
Potassium dichromate
CL:0000094
Granular leukocyte[accessedResource: CL:0000094][accessDate: 04-11-2010]
A polymorphonuclear white blood cell with granule-containing cytoplasm.
Granular leukocyte
A polymorphonuclear white blood cell with granule-containing cytoplasm.[accessedResource: BTO:0000539][accessDate: 04-11-2010]
Granular leucocyte
James Malone
Granular leucocyte[accessedResource: CL:0000094][accessDate: 04-11-2010]
A leukocyte with abundant granules in the cytoplasm.[accessedResource: CL:0000094][accessDate: 04-11-2010]
BTO:0000539
granulocyte
A leukocyte with abundant granules in the cytoplasm.
GRO:0005317
GRO:0005317[accessedResource: BTO:0000628][accessDate: 04-11-2010]
BTO:0000628
panicle[accessedResource: BTO:0000628][accessDate: 04-11-2010]
inflorescence
James Malone
A flower cluster with a definite arrangement.[accessedResource: BTO:0000628][accessDate: 04-11-2010]
A flower cluster with a definite arrangement.
PO:0009049
panicle
GeneRIF:15490240
GeneRIF:12142723
GeneRIF:15367919
A congenital metabolic disorder affecting the exocrine glands, inherited as an autosomal trait. The secretions of exocrine glands are abnormal, resulting in excessively viscid mucus production which causes obstruction of passageways (including pancreatic and bile ducts, intestines, and bronchi). The sweat sodium and chloride content are increased. Symptoms usually appear in childhood and include meconium ileus, poor growth despite good appetite, malabsorption and foul bulky stools, chronic bronchitis with cough, recurrent pneumonia, bronchiectasis, emphysema, clubbing of the fingers, and salt depletion in hot weather. -- 2003
GeneRIF:11809765
GeneRIF:11877474
Cystic fibrosis (disorder)
GeneRIF:15463895
Meconium ileus in cystic fibrosis (disorder)[accessedResource: DOID:1485][accessDate: 04-11-2010]
cystic fibrosis with meconium ileus[accessedResource: DOID:1485][accessDate: 04-11-2010]
GeneRIF:15107292
GeneRIF:15579374
GeneRIF:15184199
GeneRIF:15070876
Cystic fibrosis NOS (disorder)
GeneRIF:12732620
cystic fibrosis with other manifestations (disorder)[accessedResource: DOID:1485][accessDate: 04-11-2010]
Cystic fibrosis (disorder)[accessedResource: SNOMEDCT:190905008][accessDate: 04-11-2010]
GeneRIF:15781764
GeneRIF:16137181
Meconium ileus in cystic fibrosis (disorder)
GeneRIF:12692180
GeneRIF:12847263
A congenital metabolic disorder affecting the exocrine glands, inherited as an autosomal trait. The secretions of exocrine glands are abnormal, resulting in excessively viscid mucus production which causes obstruction of passageways (including pancreatic and bile ducts, intestines, and bronchi). The sweat sodium and chloride content are increased. Symptoms usually appear in childhood and include meconium ileus, poor growth despite good appetite, malabsorption and foul bulky stools, chronic bronchitis with cough, recurrent pneumonia, bronchiectasis, emphysema, clubbing of the fingers, and salt depletion in hot weather.[accessedResource: NCIt:C2975][accessDate: 04-11-2010]
GeneRIF:15738290
Cystic fibrosis NOS
cystic fibrosis with combined manifestations[accessedResource: DOID:1485][accessDate: 04-11-2010]
GeneRIF:15489228
GeneRIF:15533353
cystic fibrosis with combined manifestations
Meconium obstruction of intestine in mucoviscidosis[accessedResource: DOID:1485][accessDate: 04-11-2010]
GeneRIF:12820707
cystic fibrosis with pulmonary manifestations (disorder)
GeneRIF:14685937
GeneRIF:15463893
GeneRIF:16281647
Mucoviscidosis
Fibrocystic disease[accessedResource: SNOMEDCT:190905008][accessDate: 04-11-2010]
GeneRIF:12026214
GeneRIF:12297838
GeneRIF:11667971
CF[accessedResource: SNOMEDCT:190905008][accessDate: 04-11-2010]
ICD9:277.00
Cystic fibrosis NOS[accessedResource: SNOMEDCT:190911006][accessDate: 04-11-2010]
Fibrocystic disease
CYSTIC FIBROS W/O ILEUS[accessedResource: ICD9:277.00][accessDate: 04-11-2010]
GeneRIF:15611333
GeneRIF:15007059
cystic fibrosis with other manifestations (disorder)
ICD9:277.0
GeneRIF:15274124
cystic fibrosis with pulmonary manifestations
GeneRIF:14699484
GeneRIF:14695120
GeneRIF:15025720
CYSTIC FIBROS W/O ILEUS
CF
NCIt:C2975
Cystic fibrosis without mention of meconium ileus[accessedResource: ICD9:277.00][accessDate: 04-11-2010]
Meconium obstruction of intestine in mucoviscidosis
Cystic fibrosis NOS (disorder)[accessedResource: SNOMEDCT:190911006][accessDate: 04-11-2010]
GeneRIF:15537723
GeneRIF:11988083
GeneRIF:12000722
Mucoviscidosis[accessedResource: SNOMEDCT:190905008][accessDate: 04-11-2010]
cystic fibrosis
Cystic fibrosis without mention of meconium ileus
cystic fibrosis with meconium ileus (disorder)
GeneRIF:12919146
GeneRIF:16267280
cystic fibrosis with meconium ileus (disorder)[accessedResource: DOID:1485][accessDate: 04-11-2010]
GeneRIF:11984593
GeneRIF:16207846
GeneRIF:12151438
A congenital metabolic disorder affecting the exocrine glands, inherited as an autosomal trait. The secretions of exocrine glands are abnormal, resulting in excessively viscid mucus production which causes obstruction of passageways (including pancreatic and bile ducts, intestines, and bronchi). The sweat sodium and chloride content are increased. Symptoms usually appear in childhood and include meconium ileus, poor growth despite good appetite, malabsorption and foul bulky stools, chronic bronchitis with cough, recurrent pneumonia, bronchiectasis, emphysema, clubbing of the fingers, and salt depletion in hot weather.
GeneRIF:12070134
James Malone
GeneRIF:15024729
GeneRIF:11823525
cystic fibrosis with other manifestations[accessedResource: DOID:1485][accessDate: 04-11-2010]
cystic fibrosis with gastrointestinal manifestations[accessedResource: DOID:1485][accessDate: 04-11-2010]
GeneRIF:15025858
cystic fibrosis with meconium ileus
GeneRIF:15684701
GeneRIF:11872746
GeneRIF:11845300
GeneRIF:12220181
GeneRIF:15246975
GeneRIF:12142724
GeneRIF:12370389
GeneRIF:16236890
cystic fibrosis with pulmonary manifestations[accessedResource: DOID:1485][accessDate: 04-11-2010]
DOID:1485
GeneRIF:15463896
GeneRIF:12660625
GeneRIF:12948935
GeneRIF:12579467
SNOMEDCT:190911006
GeneRIF:15385508
GeneRIF:15964894
SNOMEDCT:190905008
cystic fibrosis with gastrointestinal manifestations
GeneRIF:11956211
cystic fibrosis with pulmonary manifestations (disorder)[accessedResource: DOID:1485][accessDate: 04-11-2010]
CF - Cystic fibrosis
CF - Cystic fibrosis[accessedResource: SNOMEDCT:190905008][accessDate: 04-11-2010]
cystic fibrosis with other manifestations
GeneRIF:12547728
GeneRIF:15964250
GeneRIF:15638824
GeneRIF:15336594
Spastic congenital paraplegia
Spastic paraplegia with hypertrophic sensory-motor neuropathy, type V
Type V, HMSN
Spastic Paraplegias, Hereditary
X-Linked, Spastic Paraplegia, Hereditary[accessedResource: MSH:D015419][accessDate: 04-11-2010]
GeneRIF:12161613
HERED SPASTIC PARAPLEGIA[accessedResource: ICD9:334.1][accessDate: 04-11-2010]
MSH:D015419
HSMN V
GeneRIF:15452312
Autosomal Dominant Hereditary Spastic Paraplegia
HMSN Type V[accessedResource: MSH:D015419][accessDate: 04-11-2010]
Strumpell disease
Type V Hereditary Motor and Sensory Neuropathy
GeneRIF:15248095
Hereditary X Linked Recessive Spastic Paraplegia
Hereditary spastic paraplegia (disorder)[accessedResource: SNOMEDCT:39912006][accessDate: 04-11-2010]
Hereditary motor and sensory neuropathy, type V[accessedResource: SNOMEDCT:76043009][accessDate: 04-11-2010]
Strumpell disease[accessedResource: SNOMEDCT:39912006][accessDate: 04-11-2010]
GeneRIF:16026783
HMSN V (Hereditary Motor and Sensory Neuropathy Type V)[accessedResource: MSH:D015419][accessDate: 04-11-2010]
GeneRIF:15667412
Hereditary spastic paraplegia (disorder)
GeneRIF:11704932
Strumpell-Lorrain disease[accessedResource: SNOMEDCT:39912006][accessDate: 04-11-2010]
Hereditary X Linked Recessive Spastic Paraplegia[accessedResource: MSH:D015419][accessDate: 04-11-2010]
HERED SPASTIC PARAPLEGIA
Spastic congenital paraplegia[accessedResource: SNOMEDCT:39912006][accessDate: 04-11-2010]
HSP - Hereditary spastic paraplegia
HMSN V[accessedResource: SNOMEDCT:76043009][accessDate: 04-11-2010]
Spastic Paraplegias, Hereditary[accessedResource: MSH:D015419][accessDate: 04-11-2010]
HMSN V
GeneRIF:12355402
Hereditary Autosomal Recessive Spastic Paraplegia
Hereditary sensory-motor neuropathy, type V (disorder)
Hereditary sensory-motor neuropathy, type V (disorder)[accessedResource: SNOMEDCT:76043009][accessDate: 04-11-2010]
GeneRIF:15858810
SNOMEDCT:76043009
Familial spastic paraplegia syndrome[accessedResource: SNOMEDCT:39912006][accessDate: 04-11-2010]
Hereditary Motor Sensory Neuropathy with Pyramidal Signs
hereditary spastic paraplegia
Spastic Paraplegia-Hypertrophic Motor-Sensory Neuropathy
HMSN V (Hereditary Motor and Sensory Neuropathy Type V)
X-Linked, Spastic Paraplegia, Hereditary
Spastic Paraplegia, Hereditary, Autosomal Dominant[accessedResource: MSH:D015419][accessDate: 04-11-2010]
ICD9:334.1
Hereditary sensory-motor neuropathy, type V[accessedResource: SNOMEDCT:76043009][accessDate: 04-11-2010]
Hereditary motor-sensory neuropathy with pyramidal signs[accessedResource: SNOMEDCT:76043009][accessDate: 04-11-2010]
Spastic Paraplegia, Autosomal Recessive, Hereditary[accessedResource: MSH:D015419][accessDate: 04-11-2010]
DOID:2476
A group of inherited diseases that share similar phenotypes but are genetically diverse. Different genetic loci for autosomal recessive, autosomal dominant, and x-linked forms of hereditary spastic paraplegia have been identified. Clinically, patients present with slowly progressive distal limb weakness and lower extremity spasticity. Peripheral sensory neurons may be affected in the later stages of the disease. (J Neurol Neurosurg Psychiatry 1998 Jan;64(1):61-6; Curr Opin Neurol 1997 Aug;10(4):313-8)
Familial spastic paraplegia syndrome
Hereditary sensory-motor neuropathy, type V
GeneRIF:15939438
Strumpell-Lorrain disease
HSMN V[accessedResource: DOID:2476][accessDate: 04-11-2010]
Hypertrophic Motor-Sensory Neuropathy-Spastic Paraplegia[accessedResource: MSH:D015419][accessDate: 04-11-2010]
GeneRIF:12490534
GeneRIF:11898127
GeneRIF:12134148
SNOMEDCT:39912006
HSP - Hereditary spastic paraplegia[accessedResource: SNOMEDCT:39912006][accessDate: 04-11-2010]
Spastic paraplegia with hypertrophic sensory-motor neuropathy, type V[accessedResource: SNOMEDCT:76043009][accessDate: 04-11-2010]
A group of inherited diseases that share similar phenotypes but are genetically diverse. Different genetic loci for autosomal recessive, autosomal dominant, and x-linked forms of hereditary spastic paraplegia have been identified. Clinically, patients present with slowly progressive distal limb weakness and lower extremity spasticity. Peripheral sensory neurons may be affected in the later stages of the disease. (J Neurol Neurosurg Psychiatry 1998 Jan;64(1):61-6; Curr Opin Neurol 1997 Aug;10(4):313-8)[accessedResource: MSH:D015419][accessDate: 04-11-2010]
James Malone
GeneRIF:15159500
BTO:0001639
Any small part of the embryo or adult metazoon more or less resembling the bud of a plant and presumed to have potential for growth and differentiation.[accessedResource: BTO:0001639][accessDate: 04-11-2010]
PO:0000055
MAT:0000229
James Malone
Any small part of the embryo or adult metazoon more or less resembling the bud of a plant and presumed to have potential for growth and differentiation.
bud
Neoplasm of Urinary Bladder
An abdominal cancer and bladder disease and urologic neoplasm that results_in malignant growth located_in the urinary bladder.
Tumor of Bladder[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
GeneRIF:15541380
neoplasm of bladder (disorder)
Neoplasm of the Bladder
Cancer of Bladder[accessedResource: MSH:D001749][accessDate: 04-11-2010]
GeneRIF:12672029
GeneRIF:12783123
Neoplasm of the Urinary Bladder[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
DOID:5428
Tumor of the Bladder[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
Urinary Bladder Tumors
Tumors or cancer of the URINARY BLADDER.
GeneRIF:15122326
Urinary Bladder Neoplasm
bladder tumor
Tumor of Urinary Bladder
BLADDER NEOPL
Tumor of the Bladder
Bladder Cancers
Neoplasm of the Bladder[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
NEOPL BLADDER[accessedResource: MSH:D001749][accessDate: 04-11-2010]
Cancer of the Bladder
Urinary Bladder Neoplasms
GeneRIF:12926071
Tumors, Bladder
GeneRIF:12820330
Urinary Bladder Cancer[accessedResource: MSH:D001749][accessDate: 04-11-2010]
GeneRIF:15643502
SNOMEDCT:126885006
GeneRIF:15273729
Tumor of the Urinary Bladder[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
Bladder Tumors[accessedResource: MSH:D001749][accessDate: 04-11-2010]
Cancer, Bladder[accessedResource: MSH:D001749][accessDate: 04-11-2010]
Urinary Bladder Tumor[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
Urinary Bladder Cancer
MSH:D001749
GeneRIF:12202941
Tumor of Urinary Bladder[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
A benign or malignant, primary or metastatic neoplasm of the bladder. - 2003
Neoplasm of bladder[accessedResource: SNOMEDCT:126885006][accessDate: 04-11-2010]
Cancer of Bladder
GeneRIF:11888683
Urinary Bladder Tumor
Bladder Neoplasm
NGB - New growth of bladder
Neoplasm of Bladder
NGB - New growth of bladder[accessedResource: DOID:5428][accessDate: 04-11-2010]
GeneRIF:12853839
Tumour of urinary bladder[accessedResource: SNOMEDCT:126885006][accessDate: 04-11-2010]
Neoplasm of the Urinary Bladder
URINARY BLADDER NEOPL[accessedResource: MSH:D001749][accessDate: 04-11-2010]
Tumor of Bladder
Tumors or cancer of the URINARY BLADDER.[accessedResource: MSH:D001749][accessDate: 04-11-2010]
Bladder Cancer
Neoplasm, Bladder[accessedResource: MSH:D001749][accessDate: 04-11-2010]
An abdominal cancer and bladder disease and urologic neoplasm that results_in malignant growth located_in the urinary bladder.[accessedResource: DOID:5428][accessDate: 04-11-2010]
Urinary Bladder Neoplasms[accessedResource: MSH:D001749][accessDate: 04-11-2010]
Urinary Bladder Tumors[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
NCIt:C2901
Urinary Bladder Neoplasm[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
Neoplasm of bladder (disorder)[accessedResource: SNOMEDCT:126885006][accessDate: 04-11-2010]
Tumour of urinary bladder
Neoplasm of Urinary Bladder[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
GeneRIF:12115506
Bladder Neoplasms[accessedResource: MSH:D001749][accessDate: 04-11-2010]
GeneRIF:15215162
URINARY BLADDER NEOPL
Bladder Cancers[accessedResource: MSH:D001749][accessDate: 04-11-2010]
Tumor of the Urinary Bladder
Cancer of the Bladder[accessedResource: MSH:D001749][accessDate: 04-11-2010]
A benign or malignant, primary or metastatic neoplasm of the bladder. - 2003[accessedResource: NCIt:C2901][accessDate: 04-11-2010]
Neoplasms, Bladder
James Malone
Ele Holloway
James Malone
Tomasz Adamusiak
ammonium phosphate
CASRN:10361-65-6Â
A carcinoma arising from the epithelium of the renal parenchyma (renal cell carcinoma) or the renal pelvis (renal pelvis carcinoma). The vast majority of renal cell carcinomas are adenocarcinomas. The vast majority of renal pelvis carcinomas are transitional cell carcinomas. Renal carcinomas usually affect middle aged and elderly adults. Hematuria, abdominal pain, and a palpable mass are common symptoms. -- 2004
Kidney Cancer
Tomasz Adamusiak
renal carcinoma
NCIt:C9384
Renal Cancer[accessedResource: NCIt:C9384][accessDate: 04-11-2010]
Kidney Carcinoma
A carcinoma arising from the epithelium of the renal parenchyma (renal cell carcinoma) or the renal pelvis (renal pelvis carcinoma). The vast majority of renal cell carcinomas are adenocarcinomas. The vast majority of renal pelvis carcinomas are transitional cell carcinomas. Renal carcinomas usually affect middle aged and elderly adults. Hematuria, abdominal pain, and a palpable mass are common symptoms. -- 2004[accessedResource: NCIt:C9384][accessDate: 04-11-2010]
Kidney Cancer[accessedResource: NCIt:C9384][accessDate: 04-11-2010]
Kidney Carcinoma[accessedResource: NCIt:C9384][accessDate: 04-11-2010]
Renal Cancer
1,1'-azobis(N,N-dimethylformamide)
10465-78-8
diamide
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#imprinting_design[accessedResource: MO_914][accessDate: 04-11-2010]
Tomasz Adamusiak
imprinting design
MO_914
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#imprinting_design
Ele Holloway
James Malone
acute hypotension
The cavity located at the upper end of the alimentary canal, behind the teeth and gums that is bounded on the outside by the lips, above by the hard and soft palates and below by the tongue.[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
Synonym with mouth, use mouth instead see: EFO_0000825
Oral
James Malone
Orally[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
Orally
Head and Neck, Buccal Cavity
Cavity of mouth[accessedResource: FMA:20292][accessDate: 10-05-2010]
Buccal Cavity
NCIt:C12421
Mouth
The cavity located at the upper end of the alimentary canal, behind the teeth and gums that is bounded on the outside by the lips, above by the hard and soft palates and below by the tongue.
true
FMA:20292
obsolete_oral cavity
Oral cavity
Oral[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
Buccal Cavity[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
Head and Neck, Buccal Cavity[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
Cavity of mouth
Mouth[accessedResource: NCIt:C12421][accessDate: 10-05-2010]
Oral cavity[accessedResource: FMA:20292][accessDate: 10-05-2010]
1.8
The entire dorsal mesothoracic disc (wing, notal, and pleural parts), in the larval stage of Drosophila.[accessedResource: BTO:0001464][accessDate: 04-11-2010]
wing imaginal disc[accessedResource: BTO:0001464][accessDate: 04-11-2010]
James Malone
The entire dorsal mesothoracic disc (wing, notal, and pleural parts), in the larval stage of Drosophila.
wing disc
BTO:0001464
wing imaginal disc
Adenoma, beta-Cell
Insulin-Producing Islet Cell Tumor
GeneRIF:12475221
Insulin-Producing Neoplasm of Islet Cells[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Pancreatic Insulin Producing Neoplasm
Pancreatic Insulin Producing Tumor
Insulin-Producing Neoplasm of the Islet Cells
[M]Insulinoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:134154009][accessDate: 04-11-2010]
GeneRIF:12688630
Insulin-Producing Islet Cell Neoplasm[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
SNOMEDCT:134154009
Beta Cell Neoplasm of Pancreas
Insuloma
SNOMEDCT:25324008
GeneRIF:12417605
Insulinoma (morphologic abnormality)[accessedResource: SNOMEDCT:25324008][accessDate: 04-11-2010]
A benign tumor of the PANCREATIC BETA CELLS. Insulinoma secretes excess INSULIN resulting in HYPOGLYCEMIA.
Beta Cell Neoplasm
[M]Insulinoma NOS[accessedResource: SNOMEDCT:134154009][accessDate: 04-11-2010]
Insulin-Producing Tumor of the Islet Cells
beta Cell Tumor[accessedResource: MSH:D007340][accessDate: 04-11-2010]
MSH:D007340
Insulin-Producing Islet Cell Neoplasm
Insulinomas
Insulinoma (disorder)[accessedResource: DOID:3903][accessDate: 04-11-2010]
GeneRIF:14602773
Beta Cell Neoplasm of Pancreas[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Insulin-Producing tumor of Islet cells[accessedResource: DOID:3903][accessDate: 04-11-2010]
[M]Insulinoma NOS
Insulinoma, NOS
Adenoma, beta Cell[accessedResource: MSH:D007340][accessDate: 04-11-2010]
Beta Cell Neoplasm of the Pancreas[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Tumors, beta-Cell[accessedResource: MSH:D007340][accessDate: 04-11-2010]
insulinoma
A usually benign, well circumscribed neoplasm arising from the beta cells of the pancreas. Patients exhibit symptoms related to hypoglycemia due to inappropriate secretion of insulin.
Insulomas[accessedResource: MSH:D007340][accessDate: 04-11-2010]
A usually benign, well circumscribed neoplasm arising from the beta cells of the pancreas. Patients exhibit symptoms related to hypoglycemia due to inappropriate secretion of insulin.[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Pancreatic Beta Cell Tumor[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Beta Cell Neoplasm[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Insulinoma NOS (morphologic abnormality)[accessedResource: DOID:3903][accessDate: 04-11-2010]
NCIt:C3140
James Malone
Insuloma[accessedResource: MSH:D007340][accessDate: 04-11-2010]
Pancreatic Insulin Producing Neoplasm[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Beta Cell Neoplasm of the Pancreas
SNOMEDCT:302822000
Insulinoma, NOS[accessedResource: SNOMEDCT:25324008][accessDate: 04-11-2010]
Beta Cell Tumor of the Pancreas[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Insulin-Producing Neoplasm of the Islet Cells[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Pancreatic Insulin Producing Tumor[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
A benign tumor of the PANCREATIC BETA CELLS. Insulinoma secretes excess INSULIN resulting in HYPOGLYCEMIA.[accessedResource: MSH:D007340][accessDate: 04-11-2010]
Beta Cell Tumor of Pancreas[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Tumor, beta-Cell
[M]Insulinoma NOS (morphologic abnormality)
Insulomas
GeneRIF:15060136
Insulinoma (disorder)
Pancreatic Beta Cell Tumor
Tumors, beta-Cell
GeneRIF:11986368
DOID:3903
Insulin-Producing Tumor of the Islet Cells[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Adenomas, beta-Cell[accessedResource: MSH:D007340][accessDate: 04-11-2010]
Insulin-Producing Islet Cell Tumor[accessedResource: NCIt:C3140][accessDate: 04-11-2010]
Insulin-Producing Tumor of Islet Cells
GeneRIF:14656003
Insulinomas[accessedResource: MSH:D007340][accessDate: 04-11-2010]
Beta Cell Tumor of Pancreas
beta-Cell Adenomas
Insulinoma (morphologic abnormality)
Insulin-Producing Neoplasm of Islet Cells
Beta Cell Tumor of the Pancreas
Insulinoma NOS (morphologic abnormality)
James Malone
Copenhagen
RGD:1358153
dopamine receptor antagonist
http://www.ebi.ac.uk/efo/EFO_0001879
CHEBI:48561
dopamine antagonist
A drug that binds to but does not activate dopamine receptors, thereby blocking the actions of dopamine or exogenous agonists.
dopaminergic antagonist
dopaminergic antagonists
dopamine blocker
James Malone
large intestine
posterior intestine
The more terminal division of the vertebrate intestine that is wider and shorter than the small intestine, typically divided into cecum, colon, and rectum, and concerned especially with the resorption of water and the formation of feces.[accessedResource: BTO:0000706][accessDate: 04-11-2010]
BTO:0000706
FMAID:7201
TGMA:0001020
adult hindgut
MAT:0000046
ZFA:0000706
EV:0100077
hindgut[accessedResource: MAT:0000046][accessDate: 04-11-2010]
adult hindgut[accessedResource: TGMA:0001020][accessDate: 04-11-2010]
XAO:0000131
The hindgut of adult mosquito consists of pyloric chamber, anterior intestine, rectum, anal canal and anus.[accessedResource: TGMA:0001020][accessDate: 04-11-2010]
SAEL:58
Organ with organ cavity which is continuous proximally with the small intestine and distally with the anal canal. Examples: There is only large intestine.
posterior intestine[accessedResource: ZFA:0000706][accessDate: 04-11-2010]
The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates.
Large bowel
hindgut
James Malone
The hindgut of adult mosquito consists of pyloric chamber, anterior intestine, rectum, anal canal and anus.
The more terminal division of the vertebrate intestine that is wider and shorter than the small intestine, typically divided into cecum, colon, and rectum, and concerned especially with the resorption of water and the formation of feces.
Large bowel[accessedResource: FMAID:7201][accessDate: 04-11-2010]
EMAPA:19252
The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates.[accessedResource: ZFA:0000706][accessDate: 04-11-2010]
MA:0000333
James Malone
Jie Zheng
Tomasz Adamusiak
Is an information entity about the material's (i.e., the patient's) medical record as background information relevant to the experiment.
clinical history
MO_189
A human embryonic stem cell line
BG03
HapMap haplotype mapping
Tomasz Adamusiak
presumptive hindbrain
ZFA:0000569
Tomasz Adamusiak
neural keel
ZFA:0000131
James Malone
SUM159PT
Ele Holloway
James Malone
NCI-H508
ZEA:0015061
BTO:0002615
primary root
primary root[accessedResource: MAT:0000222][accessDate: 04-11-2010]
James Malone
The main root of a plant, usually stouter than the lateral roots and growing straight downward from the stem.
taproot
MAT:0000222
The main root of a plant, usually stouter than the lateral roots and growing straight downward from the stem.[accessedResource: BTO:0002615][accessDate: 04-11-2010]
C32H47F5O3S
http://www.ebi.ac.uk/efo/EFO_0001540
CHEBI:31638
James Malone
7alpha-{9-[(4,4,5,5,5-pentafluoropentyl)sulfinyl]nonyl}estra-1(10),2,4-triene-3,17beta-diol
[H][C@]12CC[C@]3(C)[C@@H](O)CC[C@@]3([H])C1[C@H](CCCCCCCCCS(=O)CCCC(F)(F)C(F)(F)F)Cc4cc(O)ccc24
A 3-hydroxy steroid that has formula C32H47F5O3S.
InChIKey=VWUXBMIQPBEWFH-LQKBAPIOBA
InChI=1/C32H47F5O3S/c1-30-17-15-26-25-12-11-24(38)21-23(25)20-22(29(26)27(30)13-14-28(30)39)10-7-5-3-2-4-6-8-18-41(40)19-9-16-31(33,34)32(35,36)37/h11-12,21-22,26-29,38-39H,2-10,13-20H2,1H3/t22-,26-,27+,28+,29?,30+,41?/m1/s1
fulvestrant
James Malone
gastrula 50%-epiboly
ZFS:0000017
James Malone
OntologyMappingImporter following MAT:0000365
wood parenchyma
MAT:0000365
PO:0004525
MAT:0000123
TADS:0000163
Any of a group of long blind vessels opening into the posterior part of the alimentary canal in most insects and some other arthropods and functioning primarily as excretory organs.
FBbt:00005786
The most important structure of the insect's excretory organ, which may comprise cystiform or labyrinthine highly versatile tubules having their outlet into the initial section of the rectum.[accessedResource: FBbt:00005786][accessDate: 04-11-2010]
TGMA:0001038
adult Malpighian tubules
adult Malpighian tubules[accessedResource: TGMA:0001038][accessDate: 04-11-2010]
James Malone
adult Malpighian tubule
BTO:0000810
adult Malpighian tubule[accessedResource: FBbt:00005725][accessDate: 04-11-2010]
Malpighian tubule
Any of a group of long blind vessels opening into the posterior part of the alimentary canal in most insects and some other arthropods and functioning primarily as excretory organs.[accessedResource: BTO:0000810][accessDate: 04-11-2010]
There are five Malpighian tubules that are attached to the alimentary canal posteriorly.
malphigian tube[accessedResource: BTO:0000810][accessDate: 04-11-2010]
There are five Malpighian tubules that are attached to the alimentary canal posteriorly.[accessedResource: TGMA:0001038][accessDate: 04-11-2010]
Malpighian tubules[accessedResource: MAT:0000123][accessDate: 04-11-2010]
Malpighian tubules
FBbt:00005725
The most important structure of the insect's excretory organ, which may comprise cystiform or labyrinthine highly versatile tubules having their outlet into the initial section of the rectum.
malphigian tube
lung cancer cell line
Ventral tegmental nucleus (Tsai)[accessedResource: FMA:72438][accessDate: 04-11-2010]
James Malone
Ventral tegmental nucleus of Tsai[accessedResource: FMA:72438][accessDate: 04-11-2010]
FMA:72438
Ventral tegmental nucleus (Tsai)
Ventral tegmental area of Tsai[accessedResource: FMA:72438][accessDate: 04-11-2010]
Ventral tegmental area of Tsai
ventral tegmental
Ventral tegmental nucleus of Tsai
ventral tegmental area
mutagenes
mutagene
CHEBI:25435
mutagenic agent
mutagens
An agent that increases the frequency of spontanenous mutation, usually by interacting directly with DNA and causing it damage, including base substitution.
mutagenos
mutageno
James Malone
mutagen
http://www.ebi.ac.uk/efo/EFO_0001828
CHEBI:15379
molecular oxygen
InChIKey=MYMOFIZGZYHOMD-UHFFFAOYAM
Disauerstoff
InChI=1/O2/c1-2
A homoatomic molecule that has formula O2.
dioxygen
OXYGEN MOLECULE
oxygen
dioxygene
O=O
O(2)
http://www.ebi.ac.uk/efo/EFO_0002675
O2
Ele Holloway
James Malone
NCI-H1930
James Malone
Tomasz Adamusiak
chronic myeloproliferative disorder
Tomasz Adamusiak
periventricular grey zone
ZFA:0000516
James Malone
Lewis
RGD:737932
A Jurkat is a cell line.
A Jurkat is all of the following: something that is bearer of a T cell acute lymphoblastic leukemia, something
that derives from a homo sapiens, and something that derives from a T cell.
BTO:0000661
JURKAT cell[accessedResource: BTO:0000661][accessDate: 04-11-2010]
JURKAT cell
Ele Holloway
James Malone
Natural Language Generator 8th April 2010
JM
Human T cell leukemia, established from the peripheral blood of a 14-year-old boy with acute lymphoblastic leukemia (ALL) at first relapse in 1976; often this cell line is called "JM (JURKAT and JM are derived from the same patient and are sister clones), occasionally JM may be a subclone with somewhat divergent features.
JM cell
JM cell[accessedResource: BTO:0000661][accessDate: 04-11-2010]
Jurkat
Human T cell leukemia, established from the peripheral blood of a 14-year-old boy with acute lymphoblastic leukemia (ALL) at first relapse in 1976; often this cell line is called "JM (JURKAT and JM are derived from the same patient and are sister clones), occasionally JM may be a subclone with somewhat divergent features.[accessedResource: BTO:0000661][accessDate: 04-11-2010]
DSSTox_CID:22616
CASRN:6104-71-8
STRUCTURE_Formula:C17H17ClN4
DSSTox_Generic_SID:42616
James Malone
N-desmethylclozapine
Ele Holloway
Tomasz Adamusiak
STRUCTURE_ChemicalName_IUPAC:8-chloro-11-piperazin-1-yl-5H-dibenzo[b,e][1,4]diazepine
DSSTox_CID:20562
James Malone
N-iminoethyl-L-lysine dihydrochloride
Tomasz Adamusiak
STRUCTURE_ChemicalName_IUPAC:N6-ethanimidoyl-L-lysine dihydrochloride
CASRN:159190-45-1
DSSTox_Generic_SID:40562
Ele Holloway
STRUCTURE_Formula:C8H19Cl2N3O2
Ele Holloway
James Malone
SKOV3
8-(3-chlorostyryl) caffeine
InChIKey=WBWFIUAVMCNYPG-BQYQJAHWBU
CSC
James Malone
http://www.ebi.ac.uk/efo/EFO_0002490
Ele Holloway
Cn1c(\\C=C\\c2cccc(Cl)c2)nc2n(C)c(=O)n(C)c(=O)c12
1,3,7-trimethyl-8-(3-chlorostyryl)xanthine
8-CSC
Caffeine substituted at its 8-position by an (E)-3-chlorostyryl group.
InChI=1/C16H15ClN4O2/c1-19-12(8-7-10-5-4-6-11(17)9-10)18-14-13(19)15(22)21(3)16(23)20(14)2/h4-9H,1-3H3/b8-7+
8-[(E)-2-(3-chlorophenyl)ethenyl]-1,3,7-trimethyl-3,7-dihydro-1H-purine-2,6-dione
CHEBI:53115
C16H15ClN4O2
CHEBI:48358
James Malone
http://www.ebi.ac.uk/efo/EFO_0001877
polar aprotic solvent
Tomasz Adamusiak
ILSXISS41/TejJ
http://jaxmice.jax.org/strain/009268.html
A0dorEC[accessedResource: FBbt:00005832][accessDate: 04-11-2010]
James Malone
dorsal ectoderm anlage in statu nascendi
FBbt:00005832
A0dorEC
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#nutrients[accessedResource: MO_867][accessDate: 04-11-2010]
James Malone
The food provided to the organism (e.g., chow, fertilizer, DEMM 10%FBS, etc.).
A nutrient is a chemical element needed by all life forms.
Jie Zheng
chow, fertilizer, DEMM 10%FBS
nutrients
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0000628
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#nutrients
this should become a quality of a material i think
nutrient
MO_867
An assay in which the methylation state of DNA is determined and is compared between samples using array technology
methylation profiling by array
cobaltous dichloride
cobalt muriate
cobaltous chloride
cobalt(II) chloride
[Cl-].[Cl-].[Co++]
Kobalt(II)-chlorid
cobaltous chloride anhydrous
cobalt chloride
InChIKey=GVPFVAHMJGGAJG-ARVHXSLACZ
Cl2Co
CoCl2
cobalt dichloride
Kobalt chlorid
cobalt(2+) chloride
dichlorocobalt
http://www.ebi.ac.uk/efo/EFO_0001511
Chloride of cobalt in which the metal is in the +2 oxidation state.
InChI=1/2ClH.Co/h2*1H;/q;;+2/p-2/f2Cl.Co/h2*1h;/q2*-1;m
CHEBI:35696
Kobaltdichlorid
Meningitides[accessedResource: MSH:D008581][accessDate: 04-11-2010]
Pachymeningitis
ICD9:322.9
Unspecified meningitis[accessedResource: SNOMEDCT:192681009][accessDate: 04-11-2010]
meningitis due to organism
Pachymeningitides
Meningitis is a nervous system infectious disease characterized as an inflammation of the pia-arachnoid meninges. It can be caused by growth of bacteria, fungi, or parasites within the subarachnoid space or by the growth of bacteria or viruses within the meningeal or ependymal cells. Meningitis is a diffuse infection caused by a variety of different agents.[accessedResource: DOID:9471][accessDate: 04-11-2010]
SNOMEDCT:192678004
Meningitis of unspecified cause
Pachymeningitis[accessedResource: MSH:D008581][accessDate: 04-11-2010]
ICD9:322
MENINGITIS NOS[accessedResource: ICD9:322.9][accessDate: 04-11-2010]
Meningitis of unspecified cause (disorder)[accessedResource: SNOMEDCT:192678004][accessDate: 04-11-2010]
Unspecified meningitis
SNOMEDCT:7180009
GeneRIF:11821235
Meningitis (disorder)
Inflammation of the coverings of the brain and/or spinal cord, which consist of the PIA MATER; ARACHNOID; and DURA MATER. Infections (viral, bacterial, and fungal) are the most common causes of this condition, but subarachnoid hemorrhage (HEMORRHAGES, SUBARACHNOID), chemical irritation (chemical MENINGITIS), granulomatous conditions, neoplastic conditions (CARCINOMATOUS MENINGITIS), and other inflammatory conditions may produce this syndrome. (From Joynt, Clinical Neurology, 1994, Ch24, p6)[accessedResource: MSH:D008581][accessDate: 04-11-2010]
James Malone
Meningitis (disorder)[accessedResource: DOID:9471][accessDate: 04-11-2010]
DOID:9471
meningitis due to organism[accessedResource: DOID:9471][accessDate: 04-11-2010]
GeneRIF:12707352
GeneRIF:12198614
Meningitis of unspecified cause (disorder)
SNOMEDCT:192681009
Meningitis is a nervous system infection characterized as an inflammation of the pia-arachnoid meninges. It can be caused by growth of bacteria, fungi, or parasites within the subarachnoid space or by the growth of bacteria or viruses within the meningeal or ependymal cells. Meningitis is a diffuse infection caused by a variety of different agents.
Unspecified meningitis (disorder)
Unspecified meningitis (disorder)[accessedResource: DOID:9471][accessDate: 04-11-2010]
A disorder characterized by acute inflammation of the meninges of the brain and/or spinal cord.
Meningitis is a nervous system infectious disease characterized as an inflammation of the pia-arachnoid meninges. It can be caused by growth of bacteria, fungi, or parasites within the subarachnoid space or by the growth of bacteria or viruses within the meningeal or ependymal cells. Meningitis is a diffuse infection caused by a variety of different agents.
Meningitides
MENINGITIS NOS
Meningitis of unspecified cause[accessedResource: DOID:9471][accessDate: 04-11-2010]
Inflammation of the coverings of the brain and/or spinal cord, which consist of the PIA MATER; ARACHNOID; and DURA MATER. Infections (viral, bacterial, and fungal) are the most common causes of this condition, but subarachnoid hemorrhage (HEMORRHAGES, SUBARACHNOID), chemical irritation (chemical MENINGITIS), granulomatous conditions, neoplastic conditions (CARCINOMATOUS MENINGITIS), and other inflammatory conditions may produce this syndrome. (From Joynt, Clinical Neurology, 1994, Ch24, p6)
meningitis
MSH:D008581
Pachymeningitides[accessedResource: MSH:D008581][accessDate: 04-11-2010]
A disorder characterized by acute inflammation of the meninges of the brain and/or spinal cord.[accessedResource: NCIt:C26828][accessDate: 04-11-2010]
GeneRIF:15449178
NCIt:C26828
James Malone
UACC812
Ele Holloway
James Malone
HEC1B
HEC-1-B
Ele Holloway
James Malone
LS174T
A sapphyrin that has formula C24H17N5.
InChIKey=COFLCBMDHTVQRA-DABHNVCVBQ
A member of the sapphyrins that has formula C24H17N5.
C24H17N5
http://www.ebi.ac.uk/efo/EFO_0001609
InChI=1/C24H17N5/c1-2-16-12-18-4-6-20(27-18)14-22-8-10-24(29-22)23-9-7-21(28-23)13-19-5-3-17(26-19)11-15(1)25-16/h1-14,25,28-29H/b15-11-,16-12-,17-11-,18-12-,19-13-,20-14-,21-13-,22-14-,24-23-
CHEBI:36779
sapphyrin
c1cc2cc3ccc([nH]3)c3ccc(cc4ccc(cc5ccc(cc1n2)[nH]5)n4)[nH]3
Seminoma of the Testis
Testicular Seminoma Pure
testicular seminoma
Tomasz Adamusiak
Seminoma of Testis[accessedResource: NCIt:C7328][accessDate: 04-11-2010]
Seminoma of the Testis[accessedResource: NCIt:C7328][accessDate: 04-11-2010]
A malignant germ cell tumor arising from the testis. It is believed that it is derived from the sexually undifferentiated embryonic gonad. Treatment with radiotherapy is highly successful when the tumor is diagnosed in localized stages, which represents the majority of presentations of seminoma.
NCIt:C7328
Seminoma of Testis
A malignant germ cell tumor arising from the testis. It is believed that it is derived from the sexually undifferentiated embryonic gonad. Treatment with radiotherapy is highly successful when the tumor is diagnosed in localized stages, which represents the majority of presentations of seminoma.[accessedResource: NCIt:C7328][accessDate: 04-11-2010]
Testicular Seminoma Pure[accessedResource: NCIt:C7328][accessDate: 04-11-2010]
Tomasz Adamusiak
l
true
Jie Zheng
James Malone
MO_444
http://www.ebi.ac.uk/efo/EFO_0001713
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#L
A volume unit which is equal to one thousandth of a cubic meter or 10^[-3] m^[3], or to 1 decimeter.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#L[accessedResource: MO_444][accessDate: 04-11-2010]
A liter is a volume unit which is equal to one thousandth of a cubic meter or 10^-3 m^3, or to 1 decimeter.
liter
Embryoblast[accessedResource: NCIt:C13740][accessDate: 04-11-2010]
James Malone
inner cell mass
NCIt:C13740
Embryoblast
vertebral column[accessedResource: MAT:0000148][accessDate: 04-11-2010]
postcranial axial skeleton[accessedResource: TAO:0000317][accessDate: 04-11-2010]
The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.[accessedResource: ZFA:0000317][accessDate: 04-11-2010]
axial skeleton
The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.
The post-cranial structural components forming the long axis of the vertebrate body; usually consists of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.[accessedResource: TAO:0000317][accessDate: 04-11-2010]
SAEL:121
EMAPA:17214
postcranial axial skeleton
TAO:0000317
vertebral column
FMAID:71221
MA:0000308
AAO:0000034
The post-cranial structural components forming the long axis of the vertebrate body; usually consists of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.
axial skeleton structure
postcranial axia skelton
*Subdivision of skeleton which consists of the bones of the vertebral column, the thoracic cage and the pelvis.
ZFA:0000317
MAT:0000148
EHDAA:5049
James Malone
postcranial axia skelton[accessedResource: MAT:0000148][accessDate: 04-11-2010]
axial skeleton[accessedResource: MAT:0000148][accessDate: 04-11-2010]
Other disorders of intestine
ICD9:569
acne nevus[accessedResource: DOID:27][accessDate: 04-11-2010]
[X]Other diseases of intestines (disorder)
OTHER DISEASES OF INTESTINES AND PERITONEUM[accessedResource: ICD9:560-569.99][accessDate: 04-11-2010]
Other specified disorders of rectum and anus
Disorder of digestive system (disorder)[accessedResource: SNOMEDCT:53619000][accessDate: 04-11-2010]
ICD9:569.49
Digestive system diseases NOS
[X]Other diseases of the digestive system (disorder)[accessedResource: SNOMEDCT:197569009][accessDate: 04-11-2010]
OTHER DISEASES OF DIGESTIVE SYSTEM[accessedResource: ICD9:570-579.99][accessDate: 04-11-2010]
[X]Other diseases of the digestive system (disorder)
Other gallbladder disorders
Other gallbladder disorders (disorder)
Disorder of digestive system[accessedResource: SNOMEDCT:53619000][accessDate: 04-11-2010]
[X]Other specified diseases of anus and rectum
SNOMEDCT:53619000
Other disorders of intestine[accessedResource: ICD9:569][accessDate: 04-11-2010]
Gastrointestinal and digestive disorder
ICD9:520-579.99
Other gallbladder disorders[accessedResource: SNOMEDCT:197407006][accessDate: 04-11-2010]
SNOMEDCT:197407006
Other diseases of the intestines and peritoneum[accessedResource: SNOMEDCT:197043006][accessDate: 04-11-2010]
[X]Other diseases of intestines
Other disorders of gallbladder
[X]Other diseases of intestines (disorder)[accessedResource: SNOMEDCT:197538005][accessDate: 04-11-2010]
SNOMEDCT:197538005
Other gallbladder disorders NOS (disorder)
OTHER DISEASES OF DIGESTIVE SYSTEM
OTHER DISEASES OF INTESTINES AND PERITONEUM
Other diseases of the intestines and peritoneum
ICD9:564
RECTAL & ANAL DIS NEC[accessedResource: ICD9:569.49][accessDate: 04-11-2010]
SNOMEDCT:197543003
SNOMEDCT:197264003
SNOMEDCT:197575000
Digestive system diseases NOS (disorder)
Disease of digestive system (disorder)
Other intestinal disorders NOS (disorder)
nevus comedonicus (disorder)[accessedResource: DOID:27][accessDate: 04-11-2010]
Other disorders of intestine (disorder)[accessedResource: SNOMEDCT:197209006][accessDate: 04-11-2010]
[X]Other specified diseases of anus and rectum[accessedResource: SNOMEDCT:197543003][accessDate: 04-11-2010]
Disease of digestive system, NOS[accessedResource: SNOMEDCT:53619000][accessDate: 04-11-2010]
Other intestinal disorders NOS (disorder)[accessedResource: SNOMEDCT:197264003][accessDate: 04-11-2010]
ICD9:564.4
acne nevus
Other specified disorders of rectum and anus[accessedResource: ICD9:569.49][accessDate: 04-11-2010]
Other postoperative functional disorders[accessedResource: ICD9:564.4][accessDate: 04-11-2010]
DISEASES OF THE DIGESTIVE SYSTEM
Pilosebaceous Nevoid disorder[accessedResource: DOID:27][accessDate: 04-11-2010]
Other gallbladder disorders NOS
ICD9:569.4
Disease of digestive system
GIT diseases
Other disorders of gallbladder[accessedResource: ICD9:575][accessDate: 04-11-2010]
digestive system disease
Other postoperative functional disorders
Disease of digestive system[accessedResource: SNOMEDCT:53619000][accessDate: 04-11-2010]
Other intestine disorders
Pilosebaceous Nevoid disorder
ICD9:575
SNOMEDCT:197569009
Disorder of digestive system
Other gallbladder disorders NOS (disorder)[accessedResource: SNOMEDCT:197435005][accessDate: 04-11-2010]
Disease of digestive system (disorder)[accessedResource: SNOMEDCT:53619000][accessDate: 04-11-2010]
[X]Other diseases of the digestive system
POSTOP GI FUNCT DIS NEC[accessedResource: ICD9:564.4][accessDate: 04-11-2010]
[X]Other specified diseases of anus and rectum (disorder)[accessedResource: SNOMEDCT:197543003][accessDate: 04-11-2010]
Other intestinal disorders NOS[accessedResource: SNOMEDCT:197264003][accessDate: 04-11-2010]
Functional digestive disorders, not elsewhere classified
Other diseases of the intestines and peritoneum (disorder)
Disease of digestive system, NOS
POSTOP GI FUNCT DIS NEC
GIT diseases[accessedResource: SNOMEDCT:53619000][accessDate: 04-11-2010]
ICD9:570-579.99
[X]Other diseases of the digestive system[accessedResource: SNOMEDCT:197569009][accessDate: 04-11-2010]
Digestive system diseases NOS (disorder)[accessedResource: SNOMEDCT:197575000][accessDate: 04-11-2010]
Digestive system diseases NOS[accessedResource: SNOMEDCT:197575000][accessDate: 04-11-2010]
Other diseases of the intestines and peritoneum (disorder)[accessedResource: SNOMEDCT:197043006][accessDate: 04-11-2010]
SNOMEDCT:197435005
[X]Other diseases of intestines[accessedResource: SNOMEDCT:197538005][accessDate: 04-11-2010]
DOID:27
nevus comedonicus (disorder)
Other gallbladder disorders NOS[accessedResource: SNOMEDCT:197435005][accessDate: 04-11-2010]
Functional digestive disorders, not elsewhere classified[accessedResource: ICD9:564][accessDate: 04-11-2010]
Gastrointestinal and digestive disorder[accessedResource: SNOMEDCT:53619000][accessDate: 04-11-2010]
James Malone
Other gallbladder disorders (disorder)[accessedResource: SNOMEDCT:197407006][accessDate: 04-11-2010]
Disorder of digestive system (disorder)
Other intestinal disorders NOS
SNOMEDCT:197043006
SNOMEDCT:197209006
ICD9:560-569.99
Other disorders of intestine (disorder)
Other intestine disorders[accessedResource: SNOMEDCT:197209006][accessDate: 04-11-2010]
[X]Other specified diseases of anus and rectum (disorder)
DISEASES OF THE DIGESTIVE SYSTEM[accessedResource: ICD9:520-579.99][accessDate: 04-11-2010]
RECTAL & ANAL DIS NEC
Tomasz Adamusiak
embryonic midgut interstitial cell
FBbt:00005626
Proximal portion of anterior descending branch of left coronary artery[accessedResource: FMAID:3866][accessDate: 04-11-2010]
Jie Zheng
Tomasz Adamusiak
proximal portion of anterior interventricular branch of left coronary artery
FMAID:3866
Proximal portion of anterior descending branch of left coronary artery
Female reproductive organ.
EHDAA:8124
EMAPA:17962
James Malone
ovary
XAO:0000258
ovaries[accessedResource: ZFA:0000403][accessDate: 04-11-2010]
SAEL:76
AAO:0000371
MA:0000384
animal ovary
ZFA:0000403
ovaries
EV:0100111
TAO:0000403
MAT:0000125
Female reproductive organ.[accessedResource: ZFA:0000403][accessDate: 04-11-2010]
FMAID:7209
Ovary[accessedResource: FMAID:7209][accessDate: 04-11-2010]
TADS:0000400
FBbt:00004865
STRUCTURE_Formula:1'-methyl-5-{[2'-methyl-4'-(5-methyl-1,2,4-oxadiazol-3-yl)biphenyl-4-yl]carbonyl}-6,7-dihydro-5H-spiro[furo[2,3-f]indole-3,4'-piperidine] hydrochloride
DSSTox_CID:42627
CASRN:180084-26-8
Tomasz Adamusiak
SB 224289 hydrochloride
James Malone
DSSTox_Generic_SID:C32H33ClN4O3
Ele Holloway
James Malone
GM11993
James Malone
GM12156
James Malone
time
James Malone
http://www.ebi.ac.uk/efo/EFO_0002093
A loess transformation is a data transformation that takes as input a collection of real number pairs (x, y) and, after performing (one or more) loess fittings, utilizes the resulting curves to transform each (x, y) in the input into (x, y-f(x)) where f(x) is one of the fitted curves.
loess transformation
MAT:0000180
TAO:0000026
A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland. Kimmel et al, 1995.[accessedResource: TAO:0000026][accessDate: 04-11-2010]
hgg
hgg[accessedResource: ZFA:0000026][accessDate: 04-11-2010]
James Malone
A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland. Kimmel et al, 1995.
hatching gland
ZFA:0000026
A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland.[accessedResource: ZFA:0000026][accessDate: 04-11-2010]
BTO:0000558
A transversely oriented set of cells located deep to the enveloping layer on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland;The fish hatching gland is a unicellular holocrine gland. Although it has recently been found that the precursors or immature forms of the gland cells considerably migrate in the embryonic body during development (see later), the final location of the hatching gland cells in fish is generally restricted to anterior and/or dorsal regions of a well-grown prehatching embryo. In medaka, the final location is somewhat unique: The giant gland cells are mostly localized in the inner surface of the buccal (or pharyngeal) cavity.
A transversely oriented set of cells located deep to the enveloping layer on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland;The fish hatching gland is a unicellular holocrine gland. Although it has recently been found that the precursors or immature forms of the gland cells considerably migrate in the embryonic body during development (see later), the final location of the hatching gland cells in fish is generally restricted to anterior and/or dorsal regions of a well-grown prehatching embryo. In medaka, the final location is somewhat unique: The giant gland cells are mostly localized in the inner surface of the buccal (or pharyngeal) cavity.[accessedResource: BTO:0000558][accessDate: 04-11-2010]
A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland.
Ele Holloway
James Malone
corneal stroma
MA:0001245
http://www.ebi.ac.uk/efo/EFO_0001524
dinitrophenol
CHEBI:39352
C6H4N2O5
James Malone
Tomasz Adamusiak
primary myelofibrosis
Ele Holloway
James Malone
SW962
DSSTox_Generic_SID:32005
Ele Holloway
CASRN:65646-68-6
James Malone
DSSTox_CID:12005
4-hydroxyphenyl retinamide
STRUCTURE_Formula:C26H33NO2
STRUCTURE_ChemicalName_IUPAC:15-[(4-hydroxyphenyl)amino]retinal
Tomasz Adamusiak
4HPR
Ele Holloway
James Malone
JVM3
SKMC
Human Skeletal Muscle Cells
A cell type that is the first of the maturation stages of the granulocytic leukocytes normally found in the bone marrow. Granules are seen in the cytoplasm. The nuclear material of the myelocyte is denser than that of the myeloblast but lacks a definable membrane. The cell is flat and contains increasing numbers of granules as maturation progresses.
A cell type that is the first of the maturation stages of the granulocytic leukocytes normally found in the bone marrow. Granules are seen in the cytoplasm. The nuclear material of the myelocyte is denser than that of the myeloblast but lacks a definable membrane. The cell is flat and contains increasing numbers of granules as maturation progresses.[accessedResource: CL:0002193][accessDate: 04-11-2010]
Jie Zheng
A cell derived from a promyelocyte. It differentiates into a metamyelocyte. It has a diameter of 10-18 micrometer, and an oval or round nucleus with finely granulated chromatin.[accessedResource: NCIt:C13115][accessDate: 04-11-2010]
CL:0002193
A cell derived from a promyelocyte. It differentiates into a metamyelocyte. It has a diameter of 10-18 micrometer, and an oval or round nucleus with finely granulated chromatin.
NCIt:C13115
Tomasz Adamusiak
myelocyte
Tomasz Adamusiak
lateral wall spinal cord
ZFA:0000996
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ex_vivo_design[accessedResource: MO_808][accessDate: 04-11-2010]
Tomasz Adamusiak
ex vivo design
MO_808
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#ex_vivo_design
Tomasz Adamusiak
lateral dorsal aorta
ZFA:0001054
The murine MIN6 cell line derived from in vivo immortalized insulin-secreting pancreatic beta cells.
BTO:0002284
A MIN6 is a cell line.
A MIN6 derives from a mus musculus.
MIN-6 cell
James Malone
Natural Language Generator 8th April 2010
MIN-6 cell[accessedResource: BTO:0002284][accessDate: 04-11-2010]
The murine MIN6 cell line derived from in vivo immortalized insulin-secreting pancreatic beta cells.[accessedResource: BTO:0002284][accessDate: 04-11-2010]
MIN6
MIN6 cell[accessedResource: BTO:0002284][accessDate: 04-11-2010]
Ele Holloway
MIN6 cell
http://www.ebi.ac.uk/efo/EFO_0000745
true
An obsolete class is any class which is no longer required in the ontology but is maintained within the ontology file so that an audit trail exists for legacy reasons. Obsolete class and its children is disjoint with the main body of the ontology.
obsolete class
Ele Holloway
James Malone
DoTc2
DoTc2 4510
Tomasz Adamusiak
torus lateralis
ZFA:0000294
Antrum Pylori[accessedResource: NCIt:C12259][accessDate: 04-11-2010]
The initial part of the pyloric canal of the stomach. This site contains endocrine cells that produce gastrin and somatostatin.
Antrum Pylori
NCIt:C12259
Gastric Antrum[accessedResource: NCIt:C12259][accessDate: 04-11-2010]
Tomasz Adamusiak
pyloric antrum
The initial part of the pyloric canal of the stomach. This site contains endocrine cells that produce gastrin and somatostatin.[accessedResource: NCIt:C12259][accessDate: 04-11-2010]
Gastric Antrum
Jie Zheng
James Malone
HCC1171
Jie Zheng
Tomasz Adamusiak
software
IAO_0000010
MO_109
Ele Holloway
James Malone
MESSA
Tomasz Adamusiak
posterior spiracle primordium
FBbt:00000197
P1 ParMus[accessedResource: FBbt:00005498][accessDate: 04-11-2010]
James Malone
dorsal pharyngeal muscle primordium
FBbt:00005498
P1 ParMus
Monopotassium chloride
CHEBI:32588
InChIKey=WCUXLLCKKVVCTQ-UHVCZDMOCF
A metal chloride salt with a K(+) counterion.
Klor-con
http://www.ebi.ac.uk/efo/EFO_0002418
An inorganic chloride salt that has formula ClK.
muriate of potash
potassium chloride
InChI=1/ClH.K/h1H;/q;+1/p-1/fCl.K/h1h;/q-1;m
[KCl]
[Cl-].[K+]
Ele Holloway
Kaliumchlorid
Klotrix
sylvite
James Malone
Kaon-Cl 10
James Malone
http://www.ebi.ac.uk/efo/EFO_0001788
true
A time unit which is equal to 7 days.
A week is a derived time unit which is equal to 7 days.
week
UO:0000034
James Malone
CS57870 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158894&type=germplasm
CS57870
http://www.arabidopsis.org/servlets/TairObject?id=1005158894&type=germplasm
Ele Holloway
James Malone
NCI-H1155
Ele Holloway
James Malone
JM1
CH4O
methanol
InChI=1/CH4O/c1-2/h2H,1H3
InChIKey=OKKJLVBELUTLKV-UHFFFAOYAX
CH3OH
Methyl alcohol
wood spirit
The simplest aliphatic alcohol, comprising a methyl and an alcohol group.
MeOH
CHEBI:17790
wood alcohol
CO
http://www.ebi.ac.uk/efo/EFO_0001672
carbinol
wood naphtha
James Malone
Methylalkohol
GeneRIF:15001834
GeneRIF:14584072
Cervix Cancer[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
GeneRIF:12893195
NCIt:C9039
Cervix Uteri Carcinoma
Cancer of Uterine Cervix
Carcinoma of Cervix Uteri
Uterine Cervix Cancer
GeneRIF:15736426
GeneRIF:12174873
Carcinoma of Uterine Cervix[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
cervical carcinoma (uterus)
GeneRIF:12392301
GeneRIF:11956602
Uterine Cervix Carcinoma[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
Cervix Uteri Carcinoma[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
GeneRIF:15816636
carcinoma of cervix (disorder)
A carcinoma that is located_in the cervix uteri or located_in the cervical area.
A carcinoma arising from either the exocervical squamous epithelium or the endocervical glandular epithelium. The major histologic types of cervical carcinoma are: squamous carcinoma, adenocarcinoma, adenosquamous carcinoma, adenoid cystic carcinoma and undifferentiated carcinoma.
carcinoma of cervix (disorder)[accessedResource: DOID:2893][accessDate: 04-11-2010]
James Malone
GeneRIF:14578179
Cervical carcinoma may arise from either the exocervical squamous epithelium or the endocervical glandular epithelium. The major histologic types of cervical carcinoma are: squamous carcinoma, adenocarcinoma, adenosquamous carcinoma, adenoid cystic carcinoma and undifferentiated carcinoma.
GeneRIF:15856299
Carcinoma of cervix
GeneRIF:15131051
Cervix Cancer
Carcinoma of the Uterine Cervix[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
Cancer of the Cervix
Cancer of Cervix
Cervix Carcinoma
GeneRIF:12057898
GeneRIF:15066318
GeneRIF:11957139
A carcinoma that is located_in the cervix uteri or located_in the cervical area.[accessedResource: DOID:2893][accessDate: 04-11-2010]
cervix carcinoma[accessedResource: DOID:2893][accessDate: 04-11-2010]
GeneRIF:15619642
GeneRIF:15047823
GeneRIF:11809691
carcinoma of the Cervix Uteri
Cancer of Uterine Cervix[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
GeneRIF:12451999
Cancer of the Cervix[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
GeneRIF:15386342
GeneRIF:12748469
Cancer of the Uterine Cervix
cervical carcinoma
GeneRIF:11920583
DOID:2893
GeneRIF:15201979
SNOMEDCT:285432005
Cervical Cancer[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
GeneRIF:12894545
GeneRIF:16047742
Carcinoma of the Cervix[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
A carcinoma that affects the cervix uteri or cervical area.
Carcinoma of Uterine Cervix
Carcinoma of the Cervix Uteri[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
Carcinoma of cervix[accessedResource: SNOMEDCT:285432005][accessDate: 04-11-2010]
Carcinoma of the Cervix
GeneRIF:15702969
Cancer of Cervix[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
GeneRIF:16298968
Cancer of the Uterine Cervix[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
Carcinoma of Cervix Uteri[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
Uterine Cervix Carcinoma
GeneRIF:15744560
GeneRIF:12007187
Carcinoma of the Uterine Cervix
Cervical Cancer
A carcinoma arising from either the exocervical squamous epithelium or the endocervical glandular epithelium. The major histologic types of cervical carcinoma are: squamous carcinoma, adenocarcinoma, adenosquamous carcinoma, adenoid cystic carcinoma and undifferentiated carcinoma.[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
cervical carcinoma (uterus)[accessedResource: DOID:2893][accessDate: 04-11-2010]
Uterine Cervix Cancer[accessedResource: NCIt:C9039][accessDate: 04-11-2010]
GeneRIF:12820323
Ele Holloway
CHEBI:16523
D-serine
(2R)-2-amino-3-hydroxypropanoic acid
Tomasz Adamusiak
InChIKey=MTCFGRXMJLQNBG-QKGSACKDDH
N[C@H](CO)C(O)=O
(R)-2-amino-3-hydroxypropanoic acid
InChI=1/C3H7NO3/c4-2(1-5)3(6)7/h2,5H,1,4H2,(H,6,7)/t2-/m1/s1/f/h6H
D-Serin
http://www.ebi.ac.uk/efo/EFO_0002727
A serine that has formula C3H7NO3.
C3H7NO3
A 3-isobutyl-1-methylxanthine that has formula C10H14N4O2.
3-isobutyl-1-methyl-7H-xanthine
1-methyl-3-(propan-2-yl)-3,7-dihydro-1H-purine-2,6-dione
CC(C)Cn1c2nc[nH]c2c(=O)n(C)c1=O
InChI=1/C10H14N4O2/c1-6(2)4-14-8-7(11-5-12-8)9(15)13(3)10(14)16/h5-6H,4H2,1-3H3,(H,11,12)/f/h11H
http://www.ebi.ac.uk/efo/EFO_0002396
1-methyl-3-isobutylxanthine
C10H14N4O2
3-isobutyl-1-methyl-3,7-dihydro-1H-purine-2,6-dione
CHEBI:34795
3-Isobutyl-1-methyxanthine
IBMX
1-methyl-3-(2-methylpropyl)-3,7-dihydro-1H-purine-2,6-dione
3-isobutyl-1-methylxanthine
James Malone
Ele Holloway
InChIKey=APIXJSLKIYYUKG-WXRBYKJCCL
1-methyl-3-(2-methylpropyl)-7H-purine-2,6-dione
assay by instrument
Ele Holloway
James Malone
RL
James Malone
An assay in which high throughput sequencing technology is used to analyse the microRNA component of the transcriptome.
microRNA profiling by high throughput sequencing
Tomasz Adamusiak
Malpighian tubule main body primordium
FBbt:00005501
Randa
Platinex
cis-diamminedichloridoplatinum(II)
InChI=1/2ClH.2H3N.Pt/h2*1H;2*1H3;/q;;;;+2/p-2/f2Cl.2H3N.Pt/h2*1h;;;/q2*-1;;;m
H6Cl2N2Pt
cis-[PtCl2(NH3)2]
cis-DDP
cisplatinum
cis-diamminedichloroplatinum
(SP-4-2)-diamminedichloroplatinum
Neoplatin
InChIKey=LXZZYRPGZAFOLE-WMUYXLCICY
Peyrone's salt
A platinum-containing anticancer drug that interacts with, and forms cross-links between, DNA and proteins. It is used as a neoplasm inhibitor to treat solid tumours, primarily of the testis and ovary.
Platinol
Cl2H6N2Pt
Peyrone's chloride
cis-dichlorodiammineplatinum(II)
cisplatino
cis-diammineplatinum(II) dichloride
Briplatin
Platamine
Cismaplat
James Malone
Lederplatin
cisplatine
(SP-4-2)-diamminedichloridoplatinum
[H][N]([H])([H])[Pt](Cl)(Cl)[N]([H])([H])[H]
cisplatin
CHEBI:27899
http://www.ebi.ac.uk/efo/EFO_0001507
cis-diamminedichloroplatinum(II)
James Malone
CS57658 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158682&type=germplasm
CS57658
http://www.arabidopsis.org/servlets/TairObject?id=1005158682&type=germplasm
InChI=1/C2H6O3S/c1-5-6(2,3)4/h1-2H3
CHEBI:25255
methyl methanesulfonate
CB1540
http://www.ebi.ac.uk/efo/EFO_0001573
COS(C)(=O)=O
A methanesulfonate ester that has formula C2H6O3S.
InChIKey=MBABOKRGFJTBAE-UHFFFAOYAK
MMS
Methyl mesylate
Methanesulfonic acid methyl ester
C2H6O3S
as-Dimethyl sulfite
Tomasz Adamusiak
ventral sensory complex primordium
FBbt:00005552
CHEBI:48218
James Malone
http://www.ebi.ac.uk/efo/EFO_0001874
antiseptic drug
James Malone
perirhinal cortex
MA:0000912
An instrument that converts a variable electrical current to mechanical vibration of a metallic probe. The instrument is used for the lysis of cells, the mixing of compounds or solutions, or to create emulsions.
A sonicator is an instrument that converts a variable electrical current to mechanical vibration of a metalic probe. The instrument is used for the lysis of cells, the mixing of compounds or solutions, or to create emulsions. [accessedResource: http://purl.obolibrary.org/obo/OBI_0400114][accessDate: 2009-08-12]
http://www.ebi.ac.uk/efo/EFO_0002023
James Malone
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#sonicator
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#sonicator[accessedResource: MO_477][accessDate: 04-11-2010]
sonicator
MO_477
true
2.1
Consolodated with ChiP-seq EFO_0002692
obsolete_ChIP-seq by high throughput sequencing
Tomasz Adamusiak
pharyngeal pouch 3
ZFA:0001131
Ele Holloway
James Malone
DKMG
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#data_analyst[accessedResource: MO_753][accessDate: 04-11-2010]
Tomasz Adamusiak
data analyst
MO_753
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#data_analyst
GeneRIF:15114595
Stroke, Cerebral[accessedResource: MSH:D020521][accessDate: 04-11-2010]
CVA (cerebral vascular accident)[accessedResource: DOID:3455][accessDate: 04-11-2010]
DOID:3455
GeneRIF:15178823
GeneRIF:14574075
Cerebrovascular accident (disorder)[accessedResource: SNOMEDCT:230690007][accessDate: 04-11-2010]
GeneRIF:12393616
GeneRIF:15634282
GeneRIF:15494442
GeneRIF:15456942
GeneRIF:16262627
GeneRIF:15116266
Stroke and cerebrovascular accident unspecified
GeneRIF:15623683
GeneRIF:14605330
GeneRIF:16141422
GeneRIF:15516929
GeneRIF:15080888
GeneRIF:15090053
Cerebrovascular Accidents[accessedResource: MSH:D020521][accessDate: 04-11-2010]
GeneRIF:15272143
A sudden, nonconvulsive loss of neurologic function due to an ischemic or hemorrhagic intracranial vascular event. In general, cerebrovascular accidents are classified by anatomic location in the brain, vascular distribution, etiology, age of the affected individual, and hemorrhagic vs. nonhemorrhagic nature. (From Adams et al., Principles of Neurology, 6th ed, pp777-810)
Cerebrovascular Stroke[accessedResource: MSH:D020521][accessDate: 04-11-2010]
GeneRIF:14770184
GeneRIF:15891996
GeneRIF:12464678
GeneRIF:16165118
GeneRIF:14507642
NIFSTD:birnlex_12783
GeneRIF:14500938
GeneRIF:15829914
GeneRIF:12843357
CVAs (Cerebrovascular Accident)
GeneRIF:16131797
GeneRIF:15790561
GeneRIF:15896953
GeneRIF:15725398
Cerebrovascular accident (disorder)
SNOMEDCT:270883006
GeneRIF:14500739
GeneRIF:14517540
Cerebrovascular Accident[accessedResource: MSH:D020521][accessDate: 04-11-2010]
GeneRIF:16051896
Cerebrovascular accident
GeneRIF:11935032
GeneRIF:14512079
Apoplexy[accessedResource: NIFSTD:birnlex_12783][accessDate: 04-11-2010]
CVA[accessedResource: NCIt:C3390][accessDate: 04-11-2010]
GeneRIF:15764676
Stroke NOS
GeneRIF:11822892
Stroke, Cerebral
Stroke and cerebrovascular accident unspecified[accessedResource: SNOMEDCT:270883006][accessDate: 04-11-2010]
NCIt:C3390
STROKE SYNDROME
GeneRIF:15677572
Apoplexy, Cerebrovascular
Cerebrovascular Accident, Acute
GeneRIF:15914769
Strokes, Acute[accessedResource: MSH:D020521][accessDate: 04-11-2010]
Strokes, Cerebral[accessedResource: MSH:D020521][accessDate: 04-11-2010]
CVA - Cerebrovascular accident unspecified
GeneRIF:15890883
GeneRIF:12140663
GeneRIF:14655755
GeneRIF:16020760
GeneRIF:16237435
GeneRIF:12038800
GeneRIF:15056284
Cerebrovascular accident (disorder) [Ambiguous]
GeneRIF:12947326
A sudden, nonconvulsive loss of neurologic function due to an ischemic or hemorrhagic intracranial vascular event. In general, cerebrovascular accidents are classified by anatomic location in the brain, vascular distribution, etiology, age of the affected individual, and hemorrhagic vs. nonhemorrhagic nature (MeSH).
MSH:D020521
GeneRIF:15576653
James Malone
Stroke and cerebrovascular accident unspecified (disorder)[accessedResource: DOID:3455][accessDate: 04-11-2010]
GeneRIF:12871362
Cerebrovascular Strokes[accessedResource: MSH:D020521][accessDate: 04-11-2010]
Brain Vascular Accidents
GeneRIF:15277638
GeneRIF:15894537
Cerebrovascular accident (disorder) [Ambiguous][accessedResource: DOID:3455][accessDate: 04-11-2010]
GeneRIF:15947272
Stroke, Acute
Cerebral Strokes
GeneRIF:11926892
Strokes[accessedResource: MSH:D020521][accessDate: 04-11-2010]
A group of pathological conditions characterized by sudden, non-convulsive loss of neurological function due to BRAIN ISCHEMIA or INTRACRANIAL HEMORRHAGES. Stroke is classified by the type of tissue NECROSIS, such as the anatomic location, vasculature involved, etiology, age of the affected individual, and hemorrhagic vs. non-hemorrhagic nature. (From Adams et al., Principles of Neurology, 6th ed, pp777-810)
GeneRIF:15613145
Cerebrovascular Apoplexya[accessedResource: NIFSTD:birnlex_12783][accessDate: 04-11-2010]
Stroke, Cerebrovascular
GeneRIF:15947254
GeneRIF:12122874
GeneRIF:12855940
GeneRIF:15673342
CVA - Cerebrovascular accident unspecified[accessedResource: DOID:3455][accessDate: 04-11-2010]
CVA (cerebral vascular accident)
GeneRIF:12011770
GeneRIF:12695749
GeneRIF:15201542
GeneRIF:12598732
GeneRIF:15138244
Tomasz Adamusiak
GeneRIF:12456385
Cerebrovascular Accidents, Acute
Vascular Accident, Brain[accessedResource: MSH:D020521][accessDate: 04-11-2010]
STROKE SYNDROME[accessedResource: NCIt:C3390][accessDate: 04-11-2010]
CVA, CEREBROVASCULAR ACCIDENT
GeneRIF:14681304
GeneRIF:16051894
GeneRIF:16051899
GeneRIF:15232611
GeneRIF:15009965
A group of pathological conditions characterized by sudden, non-convulsive loss of neurological function due to BRAIN ISCHEMIA or INTRACRANIAL HEMORRHAGES. Stroke is classified by the type of tissue NECROSIS, such as the anatomic location, vasculature involved, etiology, age of the affected individual, and hemorrhagic vs. non-hemorrhagic nature. (From Adams et al., Principles of Neurology, 6th ed, pp777-810)[accessedResource: MSH:D020521][accessDate: 04-11-2010]
GeneRIF:16109906
GeneRIF:16085363
GeneRIF:14961162
SNOMEDCT:313267000
GeneRIF:11570818
SNOMEDCT:230690007
GeneRIF:15108283
Cerebrovascular Accidents
GeneRIF:12123486
GeneRIF:15861005
Cerebrovascular Apoplexya
GeneRIF:15135928
CVAs (Cerebrovascular Accident)[accessedResource: MSH:D020521][accessDate: 04-11-2010]
A sudden loss of neurological function secondary to hemorrhage or ischemia in the brain parenchyma due to a vascular event.
Stroke NOS (disorder)[accessedResource: SNOMEDCT:313267000][accessDate: 04-11-2010]
Stroke NOS (disorder)
Stroke/CVA - undefined[accessedResource: DOID:3455][accessDate: 04-11-2010]
GeneRIF:15567334
GeneRIF:14753436
Acute Strokes
GeneRIF:14644079
GeneRIF:15681302
Acute Stroke[accessedResource: MSH:D020521][accessDate: 04-11-2010]
GeneRIF:11823528
GeneRIF:15159412
Cerebrovascular Strokes
Apoplexy, Cerebrovascular[accessedResource: MSH:D020521][accessDate: 04-11-2010]
GeneRIF:15155526
GeneRIF:14753448
GeneRIF:12586134
Vascular Accidents, Brain[accessedResource: MSH:D020521][accessDate: 04-11-2010]
Stroke/CVA - undefined
GeneRIF:14671240
GeneRIF:15731479
GeneRIF:15701167
CVA, CEREBROVASCULAR ACCIDENT[accessedResource: NCIt:C3390][accessDate: 04-11-2010]
Apoplexy
GeneRIF:15044955
GeneRIF:12508918
GeneRIF:15640973
GeneRIF:12006921
Strokes
GeneRIF:16131798
Stroke NOS[accessedResource: SNOMEDCT:313267000][accessDate: 04-11-2010]
GeneRIF:12907815
A sudden loss of neurological function secondary to hemorrhage or ischemia in the brain parenchyma due to a vascular event.[accessedResource: NCIt:C3390][accessDate: 04-11-2010]
GeneRIF:16179580
CVA
GeneRIF:15910856
GeneRIF:12515395
GeneRIF:15935385
GeneRIF:15916851
stroke
Acute Cerebrovascular Accident[accessedResource: MSH:D020521][accessDate: 04-11-2010]
GeneRIF:14643574
Acute Cerebrovascular Accidents[accessedResource: MSH:D020521][accessDate: 04-11-2010]
GeneRIF:15341589
Vascular Accident, Brain
A sudden, nonconvulsive loss of neurologic function due to an ischemic or hemorrhagic intracranial vascular event. In general, cerebrovascular accidents are classified by anatomic location in the brain, vascular distribution, etiology, age of the affected individual, and hemorrhagic vs. nonhemorrhagic nature (MeSH).[accessedResource: NIFSTD:birnlex_12783][accessDate: 04-11-2010]
Stroke and cerebrovascular accident unspecified (disorder)
James Malone
HCC95
GeneRIF:15192042
GeneRIF:12203787
GeneRIF:14586073
Papillary renal cell carcinoma[accessedResource: SNOMEDCT:4797003][accessDate: 04-11-2010]
GeneRIF:15980887
PTC - Papillary thyroid carcinoma[accessedResource: SNOMEDCT:255029007][accessDate: 04-11-2010]
GeneRIF:15753666
Papillary renal cell carcinoma
GeneRIF:12193298
Papillary adenocarcinoma (morphologic abnormality)[accessedResource: SNOMEDCT:4797003][accessDate: 04-11-2010]
GeneRIF:15716612
Papillary adenocarcinoma[accessedResource: SNOMEDCT:4797003][accessDate: 04-11-2010]
Papillary Carcinoma of the Thyroid
Papillary adenocarcinoma
Papillary Carcinoma of the Thyroid Gland
Papillary Cancer of the Thyroid
GeneRIF:14532972
GeneRIF:15968271
Papillary Carcinoma of Thyroid Gland
James Malone
Papillary Carcinoma of Thyroid Gland[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
Papillary carcinoma of thyroid
GeneRIF:15817909
GeneRIF:15785245
GeneRIF:14534696
A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. It is linked to radiation exposure and is the most common malignant thyroid lesion, comprising 75% to 80% of all thyroid cancers in iodine sufficient countries. Diagnostic procedures include: thyroid function tests, thyroid radioisotope scanning, thyroid ultrasound, and fine needle biopsy. Microscopically, the diagnosis is based on the distinct characteristics of the malignant cells, which include enlargement, oval shape, elongation, and overlapping of the nuclei. The nuclei also display clearing or have a ground glass appearance. Depending on the size and spread of the disease, surgical options include lobectomy, and partial or complete thyroidectomy. Adjuvant treatment options include: radioiodine therapy, TSH suppression and external radiation.[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
Papillary Cancer of the Thyroid Gland
Papillary adenocarcinoma (morphologic abnormality)
GeneRIF:15998773
GeneRIF:15277225
GeneRIF:12720532
papillary thyroid carcinoma
GeneRIF:12538453
Thyroid Gland Papillary Carcinoma
Papillary Cancer of Thyroid
PTC - Papillary thyroid carcinoma
GeneRIF:12640681
GeneRIF:16007166
GeneRIF:15709169
Papillary Cancer of Thyroid Gland
GeneRIF:12670889
GeneRIF:12819023
Papillary carcinoma of thyroid[accessedResource: DOID:3969][accessDate: 04-11-2010]
GeneRIF:11994357
Papillary thyroid carcinoma (disorder)[accessedResource: DOID:3969][accessDate: 04-11-2010]
GeneRIF:14761598
GeneRIF:14568171
Papillary Thyroid Cancer
Papillary Thyroid Cancer[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
GeneRIF:12140756
GeneRIF:12964023
Papillary Cancer of Thyroid Gland[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
Papillary adenocarcinoma, NOS[accessedResource: SNOMEDCT:4797003][accessDate: 04-11-2010]
A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. It is linked to radiation exposure and is the most common malignant thyroid lesion, comprising 75% to 80% of all thyroid cancers in iodine sufficient countries. Diagnostic procedures include: thyroid function tests, thyroid radioisotope scanning, thyroid ultrasound, and fine needle biopsy. Microscopically, the diagnosis is based on the distinct characteristics of the malignant cells, which include enlargement, oval shape, elongation, and overlapping of the nuclei. The nuclei also display clearing or have a ground glass appearance. Depending on the size and spread of the disease, surgical options include lobectomy, and partial or complete thyroidectomy. Adjuvant treatment options include: radioiodine therapy, TSH suppression and external radiation.
DOID:3969
SNOMEDCT:255029007
Papillary Carcinoma of the Thyroid[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
Papillary Cancer of the Thyroid[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
NCIt:C4035
Thyroid Gland Papillary Carcinoma[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
GeneRIF:15803188
GeneRIF:15126572
SNOMEDCT:4797003
GeneRIF:14584755
Papillary carcinoma of the Thyroid gland[accessedResource: DOID:3969][accessDate: 04-11-2010]
GeneRIF:11786418
Papillary adenocarcinoma, NOS
Papillary thyroid carcinoma (disorder)
Papillary Cancer of Thyroid[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
GeneRIF:15785240
Papillary Cancer of the Thyroid Gland[accessedResource: NCIt:C4035][accessDate: 04-11-2010]
dental plate[accessedResource: ZFA:0000644][accessDate: 04-11-2010]
SAEL:110
MA:0000348
EV:0100063
1: One of the hard bony appendages that are borne on the jaws or in many of the lower vertebrates on other bones in the walls of the mouth or pharynx and serve especially for the prehension and mastication of food and as weapons of offense and defense.n2: Any of various usually hard and sharp processes especially about the mouth of an invertebrate.
ZFA:0000644
dental plate
Organ with a cavity which consist of dentine and enamel. Examples: incisor, molar.
James Malone
BTO:0000397
dental plates
EHDAA:8009
dental plates[accessedResource: ZFA:0000644][accessDate: 04-11-2010]
1: One of the hard bony appendages that are borne on the jaws or in many of the lower vertebrates on other bones in the walls of the mouth or pharynx and serve especially for the prehension and mastication of food and as weapons of offense and defense.n2: Any of various usually hard and sharp processes especially about the mouth of an invertebrate.[accessedResource: BTO:0000397][accessDate: 04-11-2010]
EMAPA:17938
tooth
FMAID:12516
XAO:0000431
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0002036
Drosophila melanogaster
NIFSTD:birnlex_535
A 18-oxo steroid that has formula C21H28O5.
[H][C@@]1(CC[C@@]2([H])[C@]3([H])CCC4=CC(=O)CC[C@]4(C)[C@@]3([H])[C@@H](O)C[C@]12C=O)C(=O)CO
http://www.ebi.ac.uk/efo/EFO_0001479
CHEBI:27584
aldosterone
C21H28O5
11beta,21-dihydroxy-3,20-dioxopregn-4-en-18-al
(11beta)-11,21-dihydroxy-3,20-dioxopregn-4-en-18-al
InChIKey=PQSUYGKTWSAVDQ-ZVIOFETBBV
A pregnane-based steroidal hormone produced by the outer-section (zona glomerulosa) of the adrenal cortex in the adrenal gland, and acts on the distal tubules and collecting ducts of the kidney to cause the conservation of sodium, secretion of potassium, increased water retention, and increased blood pressure. The overall effect of aldosterone is to increase reabsorption of ions and water in the kidney.
InChI=1/C21H28O5/c1-20-7-6-13(24)8-12(20)2-3-14-15-4-5-16(18(26)10-22)21(15,11-23)9-17(25)19(14)20/h8,11,14-17,19,22,25H,2-7,9-10H2,1H3/t14-,15-,16+,17-,19+,20-,21+/m0/s1
An adenocarcinoma arising from the stomach. Microscopically, it is characterized by the presence of a diffuse infiltrate, composed of individual adenocarcinoma cells or groups of adenocarcinoma cells in a fibrous or mucoid stroma. Many cells contain mucin droplets, producing a signet-ring configuration.
Adenocarcinoma of the Linitis Plastica Type[accessedResource: NCIt:C9159][accessDate: 04-11-2010]
Diffuse Stomach Adenocarcinoma
Adenocarcinoma of Linitis Plastica Type
Diffuse Adenocarcinoma of the Stomach[accessedResource: NCIt:C9159][accessDate: 04-11-2010]
Diffuse Adenocarcinoma of Stomach[accessedResource: NCIt:C9159][accessDate: 04-11-2010]
Adenocarcinoma of Linitis Plastica Type[accessedResource: NCIt:C9159][accessDate: 04-11-2010]
Adenocarcinoma of the Linitis Plastica Type
diffuse gastric adenocarcinoma
NCIt:C9159
Diffuse Stomach Adenocarcinoma[accessedResource: NCIt:C9159][accessDate: 04-11-2010]
James Malone
Diffuse Adenocarcinoma of Stomach
Diffuse Adenocarcinoma of the Stomach
An adenocarcinoma arising from the stomach. Microscopically, it is characterized by the presence of a diffuse infiltrate, composed of individual adenocarcinoma cells or groups of adenocarcinoma cells in a fibrous or mucoid stroma. Many cells contain mucin droplets, producing a signet-ring configuration.[accessedResource: NCIt:C9159][accessDate: 04-11-2010]
James Malone
cleavage 32-cell
ZFS:0000006
Tomasz Adamusiak
neoplasm of thymus (disorder)[accessedResource: DOID:3277][accessDate: 04-11-2010]
neoplasm of thymus (disorder)
DOID:3277
thymic neoplasm
thymic neoplasm[accessedResource: DOID:3277][accessDate: 04-11-2010]
Ele Holloway
Thymic tumor
Thymic tumor[accessedResource: DOID:3277][accessDate: 04-11-2010]
thymus neoplasm
Tomasz Adamusiak
posterior midgut proper primordium
FBbt:00000448
STRUCTURE_Formula:N-(2,3-dihydro-1,4-benzodioxin-2-ylmethyl)-2-(2,6-dimethoxyphenoxy)ethanamine hydrochloride
James Malone
WB4101 hydrochloride
Ele Holloway
Tomasz Adamusiak
DSSTox_CID:42565
CASRN:2170-58-3
DSSTox_Generic_SID:C19H24ClNO5
A unit of arbitrary substance concentration (biologic activity concentration) defined as the concentration of one international unit per one milliliter of system volume.
International Unit per milliliter
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#International_Unit_per_Milliliter
Tomasz Adamusiak
ILSXISS24/TejJ
http://jaxmice.jax.org/strain/009300.html
CASRN:102121-60-8
Ele Holloway
STRUCTURE_ChemicalName_IUPAC:4-{[(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)carbonyl]amino}benzoic acid
DSSTox_Generic_SID:40758
Tomasz Adamusiak
AM580
James Malone
STRUCTURE_Formula:C22H25NO3
DSSTox_CID:20758
4-[(5,6,7,8-Tetrahydro-5,5,8,8-tetramethyl-2-naphthalen yl)carboxamido]benzoic acid
14-hydroxydaunorubicine
doxorubicin
C27H29NO11
14-hydroxydaunomycin
InChIKey=AOJJSUZBOXZQNB-TZSSRYMLBG
(1S,3S)-3,5,12-trihydroxy-3-(hydroxyacetyl)-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside
Adriamycin
CHEBI:28748
(8S-cis)-10-((3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranosyl)oxy)-7,8,9,10-tetrahydro-6,8,11-trihydroxy-8-(hydroxyacetyl)-1-methoxy-5,12-naphthacenedione
A deoxy hexoside that has formula C27H29NO11.
(1S,3S)-3-glycoloyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside
doxorubicine
http://www.ebi.ac.uk/efo/EFO_0001527
doxorubicinum
InChI=1/C27H29NO11/c1-10-22(31)13(28)6-17(38-10)39-15-8-27(36,16(30)9-29)7-12-19(15)26(35)21-20(24(12)33)23(32)11-4-3-5-14(37-2)18(11)25(21)34/h3-5,10,13,15,17,22,29,31,33,35-36H,6-9,28H2,1-2H3/t10-,13-,15-,17-,22+,27-/m0/s1
COc1cccc2C(=O)c3c(O)c4C[C@](O)(C[C@H](O[C@H]5C[C@H](N)[C@H](O)[C@H](C)O5)c4c(O)c3C(=O)c12)C(=O)CO
An acute myeloid leukemia in which the immature cells differentiate towards basophils. This is a rare leukemia. The observed cases have been associated with a poor prognosis. The term basophilic leukemia is used as a synonym for acute basophilic leukemia. Chronic basophilic leukemia is an inappropriate term vaguely connected to the term mast cell leukemia. (WHO, 2001)[accessedResource: NCIt:C3164][accessDate: 04-11-2010]
Leukemia Basophilic[accessedResource: NCIt:C3164][accessDate: 04-11-2010]
Tomasz Adamusiak
An acute myeloid leukemia in which the immature cells differentiate towards basophils. This is a rare leukemia. The observed cases have been associated with a poor prognosis. The term basophilic leukemia is used as a synonym for acute basophilic leukemia. Chronic basophilic leukemia is an inappropriate term vaguely connected to the term mast cell leukemia. (WHO, 2001)
acute basophilic leukemia
NCIt:C3164
Basophilic Leukemia
Tomasz Adamusiak
cleithrum
ZFA:0000184
Tomasz Adamusiak
presumptive hypochord
ZFA:0001217
SAEL:48
hematolymphoid system[accessedResource: MAT:0000022][accessDate: 04-11-2010]
MAT:0000022
XAO:0000122
hematological system[accessedResource: MAT:0000022][accessDate: 04-11-2010]
hematological system
haemopoietic system
James Malone
MA:0002434
hematolymphoid system
James Malone
DSSTox_Generic_SID:36997
Ele Holloway
comfrey
STRUCTURE_ChemicalName_IUPAC:7-{[(2,3-dihydroxy-2-isopropylbutanoyl)oxy]methyl}-4-oxido-2,3,5,7a-tetrahydro-1H-pyrrolizin-1-yl (2E)-2-methylbut-2-enoate
CASRN:72698-57-8
Tomasz Adamusiak
DSSTox_CID:16997
STRUCTURE_Formula:C20H31NO7
exemestane
107868-30-4
6-methyleneandrosta-1,4-diene-3,17-dione
ZFA:0000711
deep cell layer[accessedResource: ZFA:0000711][accessDate: 04-11-2010]
A multilayer of deep cells of fairly uniform thickness that forms during early epiboly (at dome stage; upon conversion of the blastodisc to the blastoderm); during gastrulation the DEL (deep cell layer) gives rise to the epiblast and hypoblast.
DEL
DEL[accessedResource: ZFA:0000711][accessDate: 04-11-2010]
James Malone
A multilayer of deep cells of fairly uniform thickness that forms during early epiboly (at dome stage; upon conversion of the blastodisc to the blastoderm); during gastrulation the DEL (deep cell layer) gives rise to the epiblast and hypoblast.[accessedResource: ZFA:0000711][accessDate: 04-11-2010]
deep cell layer
DEL cells
James Malone
A101D
Natural Language Generator 8th April 2010
Ele Holloway
An a101d is a cell line.
An a101d is all of the following: something that is bearer of a melanoma, something that derives from a homo sapiens, and something that derives from a skin.
MDCC-MSB1
INFLAMM MYOPATHIES IDIOPATHIC[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Muscle inflammation
GeneRIF:15950936
MUSCLE/LIGAMENT DIS NOS
SNOMEDCT:203110007
An inflammatory process affecting the skeletal muscles. Causes include infections, injuries, and autoimmune disorders.[accessedResource: NCIt:C27578][accessDate: 04-11-2010]
MSH:D009220
Inflammatory Myopathies[accessedResource: MSH:D009220][accessDate: 04-11-2010]
MYALGIA AND MYOSITIS NOS[accessedResource: ICD9:729.1][accessDate: 04-11-2010]
NCIt:C27578
Proliferative Myositis
Myositis unspecified[accessedResource: SNOMEDCT:203110007][accessDate: 04-11-2010]
Myositis unspecified
Myopathy, Idiopathic Inflammatory
MYOPATHIES IDIOPATHIC INFLAMM
INFLAMM MUSCLE DIS[accessedResource: MSH:D009220][accessDate: 04-11-2010]
GeneRIF:14569203
James Malone
Inflammation of a muscle or muscle tissue.
Muscle Disease, Inflammatory[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Mylagia and myositis, unspecified
INFLAMM MYOPATHY[accessedResource: MSH:D009220][accessDate: 04-11-2010]
ICD9:728.9
Idiopathic Inflammatory Myopathies[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Inflammatory Myopathy, Idiopathic[accessedResource: MSH:D009220][accessDate: 04-11-2010]
GeneRIF:12937135
Inflammatory disorder of muscle (disorder)[accessedResource: SNOMEDCT:128496001][accessDate: 04-11-2010]
Idiopathic Inflammatory Myopathies
SNOMEDCT:26889001
GeneRIF:12667656
Infectious Myositis
SNOMEDCT:128496001
Myopathy, Inflammatory
Proliferative Myositides[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Proliferative Myositides
Inflammatory disorder of muscle
INFLAMM MYOPATHY
Inflammation of a muscle or muscle tissue.[accessedResource: MSH:D009220][accessDate: 04-11-2010]
GeneRIF:16115818
Myositis, Infectious[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Myositis, NOS
Myositides, Focal[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Myositis, Focal[accessedResource: MSH:D009220][accessDate: 04-11-2010]
INFLAMM MUSCLE DIS
Inflammatory Muscle Diseases[accessedResource: MSH:D009220][accessDate: 04-11-2010]
DOID:633
INFECT MYOSITIS[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Infectious Myositides[accessedResource: MSH:D009220][accessDate: 04-11-2010]
An inflammatory process affecting the skeletal muscles. Causes include infections, injuries, and autoimmune disorders.
Myositides, Infectious
Myositis (disorder)
Focal Myositis
INFECT MYOSITIS
Inflammatory disorder of muscle[accessedResource: SNOMEDCT:128496001][accessDate: 04-11-2010]
Myositis (disorder)[accessedResource: DOID:633][accessDate: 04-11-2010]
GeneRIF:12742663
Myositis NOS[accessedResource: DOID:633][accessDate: 04-11-2010]
ICD9:729.1
Focal Myositides
Inflammatory Myopathies
MYALGIA AND MYOSITIS NOS
Myositis unspecified (disorder)
GeneRIF:12618121
GeneRIF:15338498
GeneRIF:11829483
Inflammatory Myopathy[accessedResource: MSH:D009220][accessDate: 04-11-2010]
myositis
Inflammatory disorder of muscle (disorder)
Unspecified disorder of muscle, ligament, and fascia[accessedResource: ICD9:728.9][accessDate: 04-11-2010]
Muscle inflammation[accessedResource: SNOMEDCT:26889001][accessDate: 04-11-2010]
MUSCLE/LIGAMENT DIS NOS[accessedResource: ICD9:728.9][accessDate: 04-11-2010]
Mylagia and myositis, unspecified[accessedResource: ICD9:729.1][accessDate: 04-11-2010]
Inflammatory Muscle Diseases
Myositis, Proliferative[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Muscle Disease, Inflammatory
GeneRIF:14741210
Myositides
Myositides[accessedResource: MSH:D009220][accessDate: 04-11-2010]
Unspecified disorder of muscle, ligament, and fascia
Myositis unspecified (disorder)[accessedResource: DOID:633][accessDate: 04-11-2010]
Tomasz Adamusiak
presumptive enteric nervous system
ZFA:0001334
James Malone
GM12145
centimetre
MO_837
Tomasz Adamusiak
A length unit which is equal to one hundredth of a meter or 10^[-2] m.
http://www.ebi.ac.uk/efo/EFO_0001720
Jie Zheng
cm
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cm[accessedResource: MO_837][accessDate: 04-11-2010]
A centimeter is a length unit which is equal to one hundredth of a meter or 10^-2 m.
true
James Malone
centimeter
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cm
nitrate
14797-55-8
24217
4217
NO3
nitrate
James Malone
The portion of the colon that runs transversely across the upper part of the abdomen, from the right to the left colic flexure.[accessedResource: BTO:0000272][accessDate: 04-11-2010]
The portion of the colon that runs transversely across the upper part of the abdomen, from the right to the left colic flexure.
transverse colon
MAT:0000312
colon transversum[accessedResource: BTO:0000272][accessDate: 04-11-2010]
BTO:0000272
colon transversum
FMAID:14546
http://www.ebi.ac.uk/efo/EFO_0002489
InChIKey=FHIDNBAQOFJWCA-OPTMDVTPDF
InChI=1/C9H11FN2O6/c10-3-1-12(9(17)11-7(3)16)8-6(15)5(14)4(2-13)18-8/h1,4-6,8,13-15H,2H2,(H,11,16,17)/t4-,5-,6-,8-/m1/s1/f/h11H
C9H11FN2O6
5-fluorouridine
5-Fluorouracil 1beta-D-ribofuranoside
James Malone
Ele Holloway
OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n1cc(F)c(=O)[nH]c1=O
Tomasz Adamusiak
The 5-fluoro derivative of uridine.
James Malone
Jie Zheng
Tomasz Adamusiak
The observable form taken by some character (or group of characters) in an individual or an organism, excluding pathology and disease. The detectable outward manifestations of a specific genotype.
phenotype
MO_192
NIFSTD:birnlex_2087
An invasive ductal breast carcinoma associated with a lobular carcinomatous component. The lobular carcinomatous component may be in situ or invasive.
DOID:6583
Invasive Duct and Lobular Carcinoma
James Malone
Infiltrating Ductal and Lobular Carcinoma[accessedResource: NCIt:C7688][accessDate: 04-11-2010]
An invasive ductal breast carcinoma associated with a lobular carcinomatous component. The lobular carcinomatous component may be in situ or invasive.[accessedResource: NCIt:C7688][accessDate: 04-11-2010]
NCIt:C7688
invasive ductal and lobular carcinoma
Invasive Duct and Lobular Carcinoma[accessedResource: NCIt:C7688][accessDate: 04-11-2010]
Infiltrating ductal and Lobular carcinoma
CHEBI:35493
James Malone
http://www.ebi.ac.uk/efo/EFO_0001842
A drug that prevents or reduces fever by lowering the body temperature from a raised state. An antipyretic will not affect the normal body temperature if one does not have fever. Antipyretics cause the hypothalamus to override an interleukin-induced increase in temperature. The body will then work to lower the temperature and the result is a reduction in fever.
antipyretic
Ele Holloway
James Malone
SW954
Tomasz Adamusiak
ventral nerve cord primordium
FBbt:00005554
true
g/L
UO:0000175
A mass unit density which is equal to mass of an object in grams divided by the volume in liters.
A gram per liter is a density unit which is equal to mass of an object in grams divided by the volume in liters.
gram per liter
James Malone
http://www.ebi.ac.uk/efo/EFO_0001810
James Malone
GM06994
Tomasz Adamusiak
slow muscle cell somite 1
ZFA:0000963
James Malone
CS57801 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158825&type=germplasm
CS57801
http://www.arabidopsis.org/servlets/TairObject?id=1005158825&type=germplasm
tetraethylenepentamine
3,6,9-triazaundecane-1,11-diamine
C8H23N5
N-(2-aminoethyl)-N'-{2-[(2-aminoethyl)amino]ethyl}ethane-1,2-diamine
http://www.ebi.ac.uk/efo/EFO_0001623
InChIKey=FAGUFWYHJQFNRV-UHFFFAOYAH
3,6,9-triazaundecamethylenediamine
CHEBI:49798
N-(2-aminoethyl)-N'-[2-[(2-aminoethyl)amino]ethyl]-1,2-ethanediamine
tetren
Tetraethylenpentamin
InChI=1/C8H23N5/c9-1-3-11-5-7-13-8-6-12-4-2-10/h11-13H,1-10H2
1,11-Diamino-3,6,9-triazaundecane
1,4,7,10,13-pentaazatridecane
A polyazaalkane that has formula C8H23N5.
TEPA
NCCNCCNCCNCCN
James Malone
Ele Holloway
EcR-RKO/KLF4
MPNST with mesenchymal differentiation[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
Melanotic MPNST
MSH:D018317
Nerve Sheath Tumors
MPNSTs[accessedResource: MSH:D018317][accessDate: 04-11-2010]
Malignant Tumor of Peripheral Nerve Sheath
GeneRIF:12660952
Tumors of the Nerve Sheath[accessedResource: MSH:D018317][accessDate: 04-11-2010]
Malignant Tumor of the Peripheral Nerve Sheath
GeneRIF:14991838
Tumors of the Nerve Sheath
Peripheral Nerve Sheath Tumors, Malignant
Malignant Neurilemoma[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
Malignant Schwannoma
malignant peripheral nerve sheath tumor [dup] (morphologic abnormality)[accessedResource: DOID:5940][accessDate: 04-11-2010]
Peripheral Nerve Sheath Tumors
GeneRIF:12152785
Neoplasms, Nerve Sheath
SNOMEDCT:19897006
malignant neoplasm of the peripheral nerve Sheath
Neurogenic sarcoma
Malignant Tumor of Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
An uncommon, highly aggressive malignant tumor, arising from the peripheral nerves and affecting mostly adults in their third to sixth decades of life. It usually occurs in medium-sized and large nerves of the buttock, thigh, upper arm, or the paraspinal region. It may be associated with neurofibromatosis 1 (NF1).[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
Nerve Sheath Tumors[accessedResource: MSH:D018317][accessDate: 04-11-2010]
SNOMEDCT:404037002
malignant peripheral nerve sheath tumor (disorder)[accessedResource: DOID:5940][accessDate: 04-11-2010]
GeneRIF:12782393
MPNSTs
Neoplasms which arise from nerve sheaths formed by SCHWANN CELLS in the PERIPHERAL NERVOUS SYSTEM or by OLIGODENDROCYTES in the CENTRAL NERVOUS SYSTEM. Malignant peripheral nerve sheath tumors, NEUROFIBROMA, and NEURILEMMOMA are relatively common tumors in this category.[accessedResource: MSH:D018317][accessDate: 04-11-2010]
Malignant Peripheral Nerve Sheath Neoplasm
malignant peripheral nerve sheath tumor (morphologic abnormality)[accessedResource: DOID:5940][accessDate: 04-11-2010]
MPNST
malignant peripheral nerve sheath tumor (disorder)
Neurogenic sarcoma [obs]
Neurofibrosarcoma
Neurosarcoma [obs]
NEOPL NERVE SHEATH
GeneRIF:12730955
Malignant Neoplasm of Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
Neurogenic sarcoma[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
Malignant Neurilemmoma[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
Malignant Peripheral Nerve Sheath Tumour
Neoplasms which arise from nerve sheaths formed by SCHWANN CELLS in the PERIPHERAL NERVOUS SYSTEM or by OLIGODENDROCYTES in the CENTRAL NERVOUS SYSTEM. Malignant peripheral nerve sheath tumors, NEUROFIBROMA, and NEURILEMMOMA are relatively common tumors in this category.
Malignant Peripheral Nerve Sheath Tumors[accessedResource: MSH:D018317][accessDate: 04-11-2010]
Perineuriomas
Epithelioid MPNST
GeneRIF:14519636
Neurosarcoma
MPNST - Malignant peripheral nerve sheath tumour[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
Malignant peripheral nerve sheath tumour[accessedResource: SNOMEDCT:404037002][accessDate: 04-11-2010]
MPNST[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
An uncommon, highly aggressive malignant tumor, arising from the peripheral nerves and affecting mostly adults in their third to sixth decades of life. It usually occurs in medium-sized and large nerves of the buttock, thigh, upper arm, or the paraspinal region. It may be associated with neurofibromatosis 1 (NF1).
Nerve Sheath Neoplasm
MPNST with glandular differentiation[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
Neoplasm, Nerve Sheath[accessedResource: MSH:D018317][accessDate: 04-11-2010]
Malignant schwannoma[accessedResource: SNOMEDCT:404037002][accessDate: 04-11-2010]
Neurofibrosarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
Neoplasms, Nerve Sheath[accessedResource: MSH:D018317][accessDate: 04-11-2010]
Melanotic psammomatous MPNST
Melanotic MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
Neurosarcoma[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
MPNST - Malignant peripheral nerve sheath tumor
Perineurioma[accessedResource: MSH:D018317][accessDate: 04-11-2010]
NEOPL NERVE SHEATH[accessedResource: MSH:D018317][accessDate: 04-11-2010]
James Malone
Malignant peripheral nerve sheath tumor (morphologic abnormality)
MPNST with glandular differentiation
GeneRIF:11642720
Neurofibrosarcoma[accessedResource: SNOMEDCT:404037002][accessDate: 04-11-2010]
Malignant peripheral nerve sheath tumor [dup] (morphologic abnormality)
MPNST - Malignant peripheral nerve sheath tumour
Melanotic psammomatous MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
DOID:5940
malignant peripheral nerve sheath tumor
Neurosarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
NCIt:C3798
Malignant Neurilemmoma
Malignant Neoplasm of the Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
Epithelioid MPNST[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
Malignant Neoplasm of Peripheral Nerve Sheath
Neurofibrosarcoma [obs]
MPNST with mesenchymal differentiation
Malignant Neurilemoma
Neurogenic sarcoma [obs][accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
Malignant Tumor of the Peripheral Nerve Sheath[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
Perineuriomas[accessedResource: MSH:D018317][accessDate: 04-11-2010]
Nerve Sheath Tumors, Peripheral[accessedResource: MSH:D018317][accessDate: 04-11-2010]
GeneRIF:12917360
Malignant Peripheral Nerve Sheath Neoplasm[accessedResource: NCIt:C3798][accessDate: 04-11-2010]
MPNST - Malignant peripheral nerve sheath tumor[accessedResource: SNOMEDCT:19897006][accessDate: 04-11-2010]
Perineurioma
A component of the embryonic/larval ring gland composed of a cluster of about 10 cells that sit medially on top of the aorta.[accessedResource: FBbt:00001719][accessDate: 04-11-2010]
embryonic corpus allatum
James Malone
embryonic/larval corpus allatum
A component of the embryonic/larval ring gland composed of a cluster of about 10 cells that sit medially on top of the aorta.
embryonic/larval corpus allatum[accessedResource: FBbt:00001719][accessDate: 04-11-2010]
FBbt:00001719
James Malone
Tomasz Adamusiak
CL:0002365
An epithelial cell of the medullary thymus. This cell type expresses a diverse range of tissue-specific antigens. This promiscuous gene expression is a cell-autonomous property of medullary epithelial cells and is maintained during the entire period of thymic T cell output.[accessedResource: CL:0002365][accessDate: 04-11-2010]
An epithelial cell located in the inner portion of the thymus where the T lymphocytes become mature and are released into the circulation.[accessedResource: NCIt:C45702][accessDate: 04-11-2010]
mTEC
mTEC[accessedResource: CL:0002365][accessDate: 04-11-2010]
NCIt:C45702
An epithelial cell of the medullary thymus. This cell type expresses a diverse range of tissue-specific antigens. This promiscuous gene expression is a cell-autonomous property of medullary epithelial cells and is maintained during the entire period of thymic T cell output.
An epithelial cell located in the inner portion of the thymus where the T lymphocytes become mature and are released into the circulation.
medullary thymic epithelial cell
James Malone
Hypertrophy is the increase in the volume of an organ or tissue due to the enlargement of its component cells.
hypertrophy
James Malone
alveolus
Alveoli
Alveoli[accessedResource: C12986][accessDate: 04-11-2010]
C12986
Bronchial Alveolus[accessedResource: C12986][accessDate: 04-11-2010]
Bronchial Alveolus
Ele Holloway
oxazepam
1087
21087
604-75-1
7-chloro-3-hydroxy-5-phenyl-1,3-dihydro-2H-1,4-benzodiazepin-2-one
C15H11ClN2O2
Ele Holloway
James Malone
true
1.8
Duplicate with EFO_0001187
obsolete_HepG2
Dopamin[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
Revimine
Hydroxytyramin[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
Hydroxytyramin
One of the catecholamine neurotransmitters in the brain. It is derived from tyrosine and is the precursor to norepinephrine and epinephrin. Dopamine is a major transmitter in the extrapyramidal system of the brain, and important in regulating movement. A family of receptors (receptors, dopamine) mediate its action (MSH).
dopaminum
3,4-Dihydroxyphenethylamine
One of the catecholamine neurotransmitters in the brain. It is derived from tyrosine and is the precursor to norepinephrine and epinephrine. Dopamine is a major transmitter in the extrapyramidal system of the brain, and important in regulating movement. A family of receptors (receptors, dopamine) mediate its action. (PubChem) Pharmacology: Dopamine is a natural catecholamine formed by the decarboxylation of 3,4-dihydroxyphenylalanine (DOPA). It is a precursor to norepinephrine in noradrenergic nerves and is also a neurotransmitter in certain areas of the central nervous system, especially in the nigrostriatal tract, and in a few peripheral sympathetic nerves. Dopamine produces positive chronotropic and inotropic effects on the myocardium, resulting in increased heart rate and cardiac contractility. This is accomplished directly by exerting an agonist action on beta-adrenoceptors and indirectly by causing release of norepinephrine from storage sites in sympathetic nerve endings. Mechanism of action: Dopamine is a precursor to norepinephrine in noradrenergic nerves and is also a neurotransmitter in certain areas of the central nervous system. Dopamine produces positive chronotropic and inotropic effects on the myocardium, resulting in increased heart rate and cardiac contractility. This is accomplished directly by exerting an agonist action on beta-adrenoceptors and indirectly by causing release of norepinephrine from storage sites in sympathetic nerve endings. Drug type: Approved. Small Molecule. Drug category: Cardiotonic Agents. Dopamine Agents. Sympathomimetic. Sympathomimetics
Hydroxytyramine[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
InChIKey=VYFYYTLLBUKUHU-UHFFFAOYAA
Revimine[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
C8H11NO2
Deoxyepinephrine[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
Dophamine
Intropin
http://www.ebi.ac.uk/efo/EFO_0001526
4-(2-aminoethyl)pyrocatechol
2-(3,4-dihydroxyphenyl)ethylamine
NIFSTD:sao2050279787
Dophamine[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
A catecholamine that has formula C8H11NO2.
Dopamine HCl
3-Hydroxytyramine
James Malone
4-(2-aminoethyl)catechol
4-(2-aminoethyl)-1,2-benzenediol
Deoxyepinephrine
Dopamin
Tomasz Adamusiak
dopamina
dopamine
Dopamine HCl[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
Intropin[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
Oxytyramine[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
NCCc1ccc(O)c(O)c1
InChI=1/C8H11NO2/c9-4-3-6-1-2-7(10)8(11)5-6/h1-2,5,10-11H,3-4,9H2
Oxytyramine
One of the catecholamine neurotransmitters in the brain. It is derived from tyrosine and is the precursor to norepinephrine and epinephrine. Dopamine is a major transmitter in the extrapyramidal system of the brain, and important in regulating movement. A family of receptors (receptors, dopamine) mediate its action. (PubChem) Pharmacology: Dopamine is a natural catecholamine formed by the decarboxylation of 3,4-dihydroxyphenylalanine (DOPA). It is a precursor to norepinephrine in noradrenergic nerves and is also a neurotransmitter in certain areas of the central nervous system, especially in the nigrostriatal tract, and in a few peripheral sympathetic nerves. Dopamine produces positive chronotropic and inotropic effects on the myocardium, resulting in increased heart rate and cardiac contractility. This is accomplished directly by exerting an agonist action on beta-adrenoceptors and indirectly by causing release of norepinephrine from storage sites in sympathetic nerve endings. Mechanism of action: Dopamine is a precursor to norepinephrine in noradrenergic nerves and is also a neurotransmitter in certain areas of the central nervous system. Dopamine produces positive chronotropic and inotropic effects on the myocardium, resulting in increased heart rate and cardiac contractility. This is accomplished directly by exerting an agonist action on beta-adrenoceptors and indirectly by causing release of norepinephrine from storage sites in sympathetic nerve endings. Drug type: Approved. Small Molecule. Drug category: Cardiotonic Agents. Dopamine Agents. Sympathomimetic. Sympathomimetics[accessedResource: NIFSTD:sao2050279787][accessDate: 04-11-2010]
Catechol in which the hydrogen at position 4 is substituted by a 2-aminoethyl group.
Hydroxytyramine
James Malone
An assay with input DNA
DNA assay
EV:0100112
MA:0000385
FBbt:00004911
FMAID:18245
A long slender tube that extends from the upper lateral cornu of the uterus to the region of the ovary of the same side; it is attached to the broad ligament by the mesosalpinx, and consists of an ampulla, an infundibulum, an isthmus, two ostia, and a pars uterina.
salpinx
Uterine tube[accessedResource: FMAID:18245][accessDate: 04-11-2010]
TAO:0000560
oviducts
ZFA:0000560
tuba uterina
A long slender tube that extends from the upper lateral cornu of the uterus to the region of the ovary of the same side; it is attached to the broad ligament by the mesosalpinx, and consists of an ampulla, an infundibulum, an isthmus, two ostia, and a pars uterina.[accessedResource: BTO:0000980][accessDate: 04-11-2010]
fallopian tube[accessedResource: MAT:0000126][accessDate: 04-11-2010]
uterine tube
MAT:0000126
James Malone
EMAPA:18984
Organ with organ cavity which connects the uterine cavity to the peritoneal cavity. Examples: There are only two uterine tubes, the right and the left uterine tubes.
BTO:0000980
tuba uterinae[accessedResource: BTO:0000980][accessDate: 04-11-2010]
Fallopian tube
TADS:0000415
oviduct
salpinx[accessedResource: BTO:0000980][accessDate: 04-11-2010]
tuba uterinae
tuba uterina[accessedResource: BTO:0000980][accessDate: 04-11-2010]
oviducts[accessedResource: ZFA:0000560][accessDate: 04-11-2010]
James Malone
A measurement of the effects of different investigators, laboratories, or organizations on experimental results are studied.
operator variation
MO_38
antiepileptique
antiepileptiques
Antiepileptika
Antikonvulsivum
CHEBI:35623
antiepileptic
James Malone
Antikonvulsiva
Antiepileptikum
http://www.ebi.ac.uk/efo/EFO_0001849
anticonvulsant
anticonvulsants
A drug used to prevent seizures or reduce their severity.
anticonvulsive agent
Ele Holloway
James Malone
SiHa
Tomasz Adamusiak
regeneration epithelium
ZFA:0001389
DSSTox_Generic_SID:20785
Ele Holloway
STRUCTURE_ChemicalName_IUPAC:{1-methyl-5-[(3-{[3-(piperidin-1-ylmethyl)phenyl]oxy}propyl)amino]-1H-1,2,4-triazol-3-yl}methanol
DSSTox_CID:785
CASRN:76956-02-0
James Malone
STRUCTURE_Formula:C19H29N5O2
Tomasz Adamusiak
loxtidine
Tomasz Adamusiak
primitive mesencephalic artery
ZFA:0001062
James Malone
fungal component
MAT:0000002
James Malone
unspecified peripheral T-cell lymphoma
Plantaris[accessedResource: FMA:22543][accessDate: 04-11-2010]
plantaris muscle
FMA:22543
plantaris
H820
NCI-H820
James Malone
Ele Holloway
James Malone
http://www.ebi.ac.uk/efo/EFO_0002402
calcium ionophore
CHEBI:22986
calcium ionophores
James Malone
SALK_037727 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=germplasm&id=4640315
SALK_037727
Germplasm:4640315
1-(p-chlorobenzoyl)-5-methoxy-2-methylindole-3-acetic acid
CHEBI:49662
C19H16ClNO4
[1-(4-chlorobenzoyl)-5-methoxy-2-methyl-1H-indol-3-yl]acetic acid
COc1ccc2n(C(=O)c3ccc(Cl)cc3)c(C)c(CC(O)=O)c2c1
An indole-3-acetic acid that has formula C19H16ClNO4.
Indometacin
InChIKey=CGIGDMFJXJATDK-QWOVJGMICU
http://www.ebi.ac.uk/efo/EFO_0001557
Indocin
James Malone
InChI=1/C19H16ClNO4/c1-11-15(10-18(22)23)16-9-14(25-2)7-8-17(16)21(11)19(24)12-3-5-13(20)6-4-12/h3-9H,10H2,1-2H3,(H,22,23)/f/h22H
indomethacin
material property
An experimental factor which is a property or characteristic of some other entity. For example, the mouse has the colour white.
http://www.ebi.ac.uk/efo/EFO_0001443
sample characteristic
true
James Malone
SpecificallyDependentContinuant
A continuant [snap:Continuant] that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same.
MAT:0000187
James Malone
EV:0100039
The modified upper part of the trachea of air-breathing vertebrates that in humans, most other mammals, and a few lower forms contains the vocal cords.[accessedResource: BTO:0001208][accessDate: 04-11-2010]
SAEL:59
AAO:0000268
EMAPA:18333
larynx
MA:0000414
BTO:0001208
The modified upper part of the trachea of air-breathing vertebrates that in humans, most other mammals, and a few lower forms contains the vocal cords.
Heterogeneous cluster that connects the pharynx to the tracheobronchial tree. Examples: There is only one larynx.
FMAID:55097
Ele Holloway
James Malone
TMK1
Peduncle of midbrain[accessedResource: FMA:62394][accessDate: 04-11-2010]
James Malone
Tomasz Adamusiak
cerebral peduncle
FMA:62394
NIFSTD:birnlex_1202
Peduncle of midbrain
1,2-dithiole-3-thione
Ele Holloway
C3H2S3
Tomasz Adamusiak
S=C1SSC=C1
InChIKey=LZENMJMJWQSSNJ-UHFFFAOYAS
InChI=1/C3H2S3/c4-3-1-2-5-6-3/h1-2H
3H-1,2-dithiole-3-thione
CHEBI:50866
1,2-dithiol-3-thione
A 1,2-dithiole that has formula C3H2S3.
http://www.ebi.ac.uk/efo/EFO_0002724
James Malone
A subacute or chronic inflammatory disease of muscle and skin, marked by proximal muscle weakness and a characteristic skin rash. The illness occurs with approximately equal frequency in children and adults. The skin lesions usually take the form of a purplish rash (or less often an exfoliative dermatitis) involving the nose, cheeks, forehead, upper trunk, and arms. The disease is associated with a complement mediated intramuscular microangiopathy, leading to loss of capillaries, muscle ischemia, muscle-fiber necrosis, and perifascicular atrophy. The childhood form of this disease tends to evolve into a systemic vasculitis. Dermatomyositis may occur in association with malignant neoplasms. (From Adams et al., Principles of Neurology, 6th ed, pp1405-6)
Polymyositis Dermatomyositis
Childhood Type Dermatomyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
GeneRIF:15338511
Childhood Type Dermatomyositis
Adult Type Dermatomyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Dermatomyositides, Adult Type
Polymyositis-Dermatomyositides
Dermatopolymyositis
MSH:D003882
Polymyositis Dermatomyositis[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Dermatomyositides
Dermatomyositis
Polymyositis-Dermatomyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
A subacute or chronic inflammatory disease of muscle and skin, marked by proximal muscle weakness and a characteristic skin rash. The illness occurs with approximately equal frequency in children and adults. The skin lesions usually take the form of a purplish rash (or less often an exfoliative dermatitis) involving the nose, cheeks, forehead, upper trunk, and arms. The disease is associated with a complement mediated intramuscular microangiopathy, leading to loss of capillaries, muscle ischemia, muscle-fiber necrosis, and perifascicular atrophy. The childhood form of this disease tends to evolve into a systemic vasculitis. Dermatomyositis may occur in association with malignant neoplasms. (From Adams et al., Principles of Neurology, 6th ed, pp1405-6)[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Dermatomyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
NCIt:C27576
childhood type dermatomyositis (disorder)
Dermatomyositis[accessedResource: MSH:D003882][accessDate: 04-11-2010]
childhood Dermatomyositis[accessedResource: DOID:14203][accessDate: 04-11-2010]
DOID:14203
Dermatopolymyositides
Adult Type Dermatomyositis[accessedResource: MSH:D003882][accessDate: 04-11-2010]
juvenile dermatomyositis
Dermatopolymyositides[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Dermatopolymyositis[accessedResource: MSH:D003882][accessDate: 04-11-2010]
Dermatomyositides, Childhood Type
Dermatomyositis, Childhood Type[accessedResource: MSH:D003882][accessDate: 04-11-2010]
SNOMEDCT:1212005
Childhood type dermatomyositis (disorder)[accessedResource: SNOMEDCT:1212005][accessDate: 04-11-2010]
childhood Dermatomyositis
Adult Type Dermatomyositis
Any of naturally occurring compounds and synthetic analogues, based on the cyclopenta[a]phenanthrene carbon skeleton, partially or completely hydrogenated; there are usually methyl groups at C-10 and C-13, and often an alkyl group at C-17. By extension, one or more bond scissions, ring expansions and/or ring contractions of the skeleton may have occurred. Natural steroids are derived biogenetically from triterpenoids.
steroid
a steroid
steroids
NCIt:C35256
Aicardi's syndrome
Aicardi's syndrome (disorder)[accessedResource: SNOMEDCT:80651009][accessDate: 04-11-2010]
SNOMEDCT:80651009
AIC - Aicardi syndrome[accessedResource: SNOMEDCT:80651009][accessDate: 04-11-2010]
Aicardi's syndrome (disorder)
James Malone
DOID:8461
Aicardi's syndrome[accessedResource: DOID:8461][accessDate: 04-11-2010]
Aicardi syndrome
AIC - Aicardi syndrome
James Malone
CS57777 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158801&type=germplasm
CS57777
http://www.arabidopsis.org/servlets/TairObject?id=1005158801&type=germplasm
rhabdomyosarcoma
Ele Holloway
James Malone
4475
Ele Holloway
James Malone
SKMEL1
Ele Holloway
James Malone
NCI-H650
Tomasz Adamusiak
embryonic leading edge cell
FBbt:00005746
CHEBI:38870
Inhalationsanaesthetika
James Malone
Inhalationsnarkotikum
http://www.ebi.ac.uk/efo/EFO_0001871
Inhalationsnarkotika
Inhalationsanaesthetikum
anesthetic gases
inhalation anesthetics
inhalation anaesthetic
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#consortium_member[accessedResource: MO_778][accessDate: 04-11-2010]
Tomasz Adamusiak
consortium member
MO_778
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#consortium_member
The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch.
L3 larva
WBls:0000035
Intermediate temporal gyrus[accessedResource: FMA:61906][accessDate: 04-11-2010]
Ele Holloway
James Malone
middle temporal gyrus
FMA:61906
Intermediate temporal gyrus
Tomasz Adamusiak
dorsal longitudinal anastomotic vessel
ZFA:0005025
Ele Holloway
James Malone
STA-ET-1
STA ET1
James Malone
CS57735 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158759&type=germplasm
CS57735
http://www.arabidopsis.org/servlets/TairObject?id=1005158759&type=germplasm
Ele Holloway
James Malone
RDES
James Malone
CSBwt-rescued fibroblasts
Ele Holloway
James Malone
SKMEL3
acetoacetate
141-81-1
20955
3-oxobutanoate
40955
C4H5O3
Ele Holloway
James Malone
SW1116
Merged plan specification and protocol and made synonymous hence this class is redundant.
true
obsolete_protocol
James Malone
http://www.ebi.ac.uk/efo/EFO_0002656
Schizosaccharomyces pombe
S. pombe
fission yeast
James Malone
true
gram per kilogram
g/kg
James Malone
A short fleshy usually underground stem bearing minute scale leaves each of which bears a bud in its axil and is potentially able to produce a new plant.[accessedResource: BTO:0001400][accessDate: 04-11-2010]
tuber
MAT:0000358
BTO:0001400
A short fleshy usually underground stem bearing minute scale leaves each of which bears a bud in its axil and is potentially able to produce a new plant.
PO:0004543
Tomasz Adamusiak
hypopharyngeal sense organ
FBbt:00002665
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#quality_control_testing_design[accessedResource: MO_981][accessDate: 04-11-2010]
Tomasz Adamusiak
quality control testing design
MO_981
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#quality_control_testing_design
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#data_coder[accessedResource: MO_695][accessDate: 04-11-2010]
Tomasz Adamusiak
data coder
MO_695
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#data_coder
James Malone
Any of the immature blood cells that develop in the bone marrow, such as those involved in hematopoiesis.
myeloid cell
CL:0000763
A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage.
A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage.[accessedResource: CL:0000763][accessDate: 04-11-2010]
marrow cell[accessedResource: BTO:0001441][accessDate: 04-11-2010]
Any of the immature blood cells that develop in the bone marrow, such as those involved in hematopoiesis.[accessedResource: BTO:0001441][accessDate: 04-11-2010]
BTO:0001441
marrow cell
race
An ethnic group is a population whose members have a common heritage that is real or presumed such as common culture, language, religion, behaviour or biological trait.
Ethnicity
A group of people with a common cultural heritage that sets them apart from others in a variety of social relationships. (MSH); A social group characterized by a distinctive social and cultural tradition maintained from generation to generation, a common history and origin and a sense of identification with the group; members of the group have distinctive features in their way of life, shared experiences and often a common genetic heritage; these features may be reflected in their experience of health and disease. (NCI); Ethnicity - an arbitrary classification of the social group a person belongs to, and either identifies with or is identified with by others, as a result of a complex of cultural, biological, geographical and other factors such as linguistic, dietary and religion traditions; ancestry, background, allegiance, or association; and physical characteristics traditionally associated with race. Increasingly the concept is used synonymously with race but this use trend has a pragmatic basis rather than scientific. (NCI); The concept of ethnic origin is an attempt to classify people, not according to their current ethnicity, but according to where their ancestors came from. Ethnic origin has become a popular classification in statistics, where the concept of race has been largely discarded. (from Wikipedia) (NCI); a group of people with a common cultural heritage that sets them apart from others in a variety of social relationships. (CSP)
Tomasz Adamusiak
James Malone
NIFSTD:birnlex_3016
Ethnicity[accessedResource: NIFSTD:birnlex_3016][accessDate: 04-11-2010]
A group of people with a common cultural heritage that sets them apart from others in a variety of social relationships. (MSH); A social group characterized by a distinctive social and cultural tradition maintained from generation to generation, a common history and origin and a sense of identification with the group; members of the group have distinctive features in their way of life, shared experiences and often a common genetic heritage; these features may be reflected in their experience of health and disease. (NCI); Ethnicity - an arbitrary classification of the social group a person belongs to, and either identifies with or is identified with by others, as a result of a complex of cultural, biological, geographical and other factors such as linguistic, dietary and religion traditions; ancestry, background, allegiance, or association; and physical characteristics traditionally associated with race. Increasingly the concept is used synonymously with race but this use trend has a pragmatic basis rather than scientific. (NCI); The concept of ethnic origin is an attempt to classify people, not according to their current ethnicity, but according to where their ancestors came from. Ethnic origin has become a popular classification in statistics, where the concept of race has been largely discarded. (from Wikipedia) (NCI); a group of people with a common cultural heritage that sets them apart from others in a variety of social relationships. (CSP)[accessedResource: NIFSTD:birnlex_3016][accessDate: 04-11-2010]
http://en.wikipedia.org/wiki/Ethnic_group
ethnic group
Femoral[accessedResource: NCIt:C12717][accessDate: 04-11-2010]
The upper leg bone positioned between the pelvis and the knee.
James Malone
os femorale[accessedResource: BTO:0001284][accessDate: 04-11-2010]
femoral bone[accessedResource: BTO:0001284][accessDate: 04-11-2010]
BTO:0001284
thigh bone
thigh bone[accessedResource: BTO:0001284][accessDate: 04-11-2010]
femur
femoral bone
The bone that extends from the pelvis to the knee, being the longest and largest bone in the body; its head articulates with the acetabulum of the hip bone, and distally, the femur, along with the patella and tibia, forms the knee joint.
Femoral
os femorale
The upper leg bone positioned between the pelvis and the knee.[accessedResource: NCIt:C12717][accessDate: 04-11-2010]
NCIt:C12717
os femoris[accessedResource: BTO:0001284][accessDate: 04-11-2010]
The bone that extends from the pelvis to the knee, being the longest and largest bone in the body; its head articulates with the acetabulum of the hip bone, and distally, the femur, along with the patella and tibia, forms the knee joint.[accessedResource: BTO:0001284][accessDate: 04-11-2010]
os femoris
Tomasz Adamusiak
posterior endoderm anlage
FBbt:00000447
James Malone
CS57890 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158914&type=germplasm
CS57890
http://www.arabidopsis.org/servlets/TairObject?id=1005158914&type=germplasm
Tomasz Adamusiak
ILSXISS94/TejJ
http://jaxmice.jax.org/strain/009284.html
James Malone
CS57752 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158776&type=germplasm
CS57752
http://www.arabidopsis.org/servlets/TairObject?id=1005158776&type=germplasm
d-1-phenyl-2-methylaminopropane
C10H15N
CHEBI:6809
methamphetamine
(alphaS)-N,alpha-dimethylbenzeneethanamine
(2S)-N-methyl-1-phenylpropan-2-amine
d-desoxyephedrine
d-N-methylamphetamine
An amphetamine that has formula C10H15N.
CN[C@@H](C)Cc1ccccc1
InChIKey=MYWUZJCMWCOHBA-VIFPVBQEBN
InChI=1/C10H15N/c1-9(11-2)8-10-6-4-3-5-7-10/h3-7,9,11H,8H2,1-2H3/t9-/m0/s1
d-phenylisopropylmethylamine
(S)-N,alpha-dimethylbenzeneethanamine
methyl-beta-phenylisopropylamine
(+)-(S)-N-alpha-dimethylphenethylamine
http://www.ebi.ac.uk/efo/EFO_0001571
d-deoxyephedrine
paraquat
1,1'-dimethyl-4,4'-bipyridinium
14799
34799
4685-14-7
C12H14N2
CHEBI:50919
James Malone
http://www.ebi.ac.uk/efo/EFO_0001857
A drug used to prevent nausea or vomiting. An antiemetic may act by a wide range of mechanisms: it might affect the medullary control centers (the vomiting center and the chemoreceptive trigger zone) or affect the peripheral receptors.
antiemetic
antiemetico
antiemetics
James Malone
CS57789 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158813&type=germplasm
CS57789
http://www.arabidopsis.org/servlets/TairObject?id=1005158813&type=germplasm
James Malone
GM12155
FBbt:00005526
James Malone
dorsal epidermis primordium
dorsal epidermis specific anlage
dorEpiP2[accessedResource: FBbt:00005526][accessDate: 04-11-2010]
dorsal epidermis specific anlage[accessedResource: FBbt:00005526][accessDate: 04-11-2010]
dorEpiP2
Connective tissue in which fat is stored and which has the cells distended by droplets of fat.
BODYFAT[accessedResource: NCIt:C12472][accessDate: 04-11-2010]
Connective tissue in which fat is stored and which has the cells distended by droplets of fat.[accessedResource: BTO:0001487][accessDate: 04-11-2010]
fat tissue[accessedResource: BTO:0001487][accessDate: 04-11-2010]
NCIt:C12472
adipose tissue
adipose[accessedResource: NCIt:C12472][accessDate: 04-11-2010]
Body Fat
adipose
A specialized form of connective tissue consisting primarily of adipocytes (fat cells), surrounded by a meshwork of collagen fibers.
James Malone
BTO:0001487
A specialized form of connective tissue consisting primarily of adipocytes (fat cells), surrounded by a meshwork of collagen fibers.[accessedResource: NCIt:C12472][accessDate: 04-11-2010]
fat tissue
Obsolete: No longer required in EFO
James Malone
true
obsolete_bone MMHCC
NCIt:C22682
Bone (MMHCC)
James Malone
BY4741
Two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gallbladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation.
enteric PNS
Tomasz Adamusiak
MA:0000222
Two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gallbladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation.[accessedResource: BTO:0002506][accessDate: 04-11-2010]
James Malone
FMAID:66070
TAO:0001155
PNS - enteric[accessedResource: MAT:0000102][accessDate: 04-11-2010]
ZFA:0001155
NIFSTD:birnlex_1166
MAT:0000102
enteric nervous system
BTO:0002506
James Malone
GM12236
Ele Holloway
James Malone
DU4475
thapsigargin
(3S,3aR,4S,6S,6aR,7S,8S,9bS)-6-(acetyloxy)-4-(butanoyloxy)-3,3a-dihydroxy-3,6-dimethyl-8-{[(3Z)-3-methylpent-3-enoyl]oxy}-2-oxo-2,3,3a,4,5,6,6a,7,8,9b-decahydroazuleno[4,5-b]furan-7-yl octanoate
20621
40621
67526-95-8
C34H50O12
Tomasz Adamusiak
hair cell posterior macula
ZFA:0000281
dendritic cell-derived intermediate cell
An apratoxin that has formula C45H69N5O8S.
InChIKey=KXUJXPZXILTXDA-WUCPXUHADD
http://www.ebi.ac.uk/efo/EFO_0001488
apratoxin A
N-((2E)-3-((4S)-4,5-dihydro-2-((1S,2S,4S,6S)-2,6-dihydroxy-1,4,7,7-tetramethyloctyl)-4-thiazolyl)-2-methyl-1-oxo-2-propenyl)-O-methyl-L-tyrosyl-N-methyl-L-alanyl-N-methyl-L-isoleucyl-L-proline (4-16)-lactone
CHEBI:35212
7'''.1,4-anhydro(N-{3-[2-(3,7-dihydroxy-5,8,8-trimethylnonan-2-yl)-4,5-dihydro-1,3-thiazol-4-yl]-2-methylpropenoyl}-O-methyl-L-tyrosyl-N-methyl-L-alanyl-N-methyl-L-isoleucyl-L-proline)
C45H69N5O8S
[H]N1[C@@H](Cc2ccc(OC)cc2)C(=O)N(C)[C@@H](C)C(=O)N(C)[C@@H]([C@@H](C)CC)C(=O)N2CCC[C@H]2C(=O)O[C@@H](C[C@@H](C)C[C@H](O)[C@H](C)C2=N[C@H](CS2)\\C=C(C)\\C1=O)C(C)(C)C
InChI=1/C45H69N5O8S/c1-13-27(3)38-43(55)50-20-14-15-35(50)44(56)58-37(45(7,8)9)22-26(2)21-36(51)29(5)40-46-32(25-59-40)23-28(4)39(52)47-34(24-31-16-18-33(57-12)19-17-31)42(54)48(10)30(6)41(53)49(38)11/h16-19,23,26-27,29-30,32,34-38,51H,13-15,20-22,24-25H2,1-12H3,(H,47,52)/b28-23+/t26-,27-,29-,30-,32-,34-,35-,36-,37-,38-/m0/s1/f/h47H
(2S,3S,5S,7S,10S,16S,19S,22S,25E,27S)-16-[(2S)-butan-2-yl]-7-tert-butyl-3-hydroxy-22-(4-methoxybenzyl)-2,5,17,19,20,25-hexamethyl-8-oxa-29-thia-14,17,20,23,30-pentaazatricyclo[25.2.1.0(10,14)]triaconta-1(30),25-diene-9,15,18,21,24-pentone
The terminal bud (0.1 - 1.0 mm) of a plant, which consists of the apical meristem (0.05 - 0.1 mm) and the immediate surrounding leaf primordia and developing leaves and adjacent stem tissue.
James Malone
PO:0000037
BTO:0000247
The terminal bud (0.1 - 1.0 mm) of a plant, which consists of the apical meristem (0.05 - 0.1 mm) and the immediate surrounding leaf primordia and developing leaves and adjacent stem tissue.[accessedResource: BTO:0000247][accessDate: 04-11-2010]
shoot tip[accessedResource: BTO:0000247][accessDate: 04-11-2010]
shoot apex
GRO:0000370[accessedResource: BTO:0000247][accessDate: 04-11-2010]
shoot tip
GRO:0000370
extraembryonic component[accessedResource: MAT:0000061][accessDate: 04-11-2010]
MAT:0000061
James Malone
extraembryonic structure
EMAPA:16042
extraembryonic structures[accessedResource: ZFA:0000020][accessDate: 04-11-2010]
extraembryonic tissue
Anatomical structure that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo.[accessedResource: ZFA:0000020][accessDate: 04-11-2010]
extraembryonic component
extraembryonic structures
ZFA:0000020
Anatomical structure that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo.
SAEL:39
FBbt:00005835
extraembryonic structure[accessedResource: ZFA:0000020][accessDate: 04-11-2010]
An acute myeloid leukemia (AML) in which abnormal promyelocytes predominate. It is characterized by the t(15;17)(q22;q12) translocation. There are two variants: the typical and microgranular variant. This AML is particularly sensitive to treatment with all trans-retinoic acid and has a favorable prognosis. (WHO, 2001)
APML - Acute promyelocytic leukemia
An acute myeloid leukemia (AML) in which abnormal promyelocytes predominate. It is characterized by the t(15;17)(q22;q12) translocation. There are two variants: the typical and micro granular (hypo granular) variant. This AML is particularly sensitive to treatment with all trans-retinoic acid and has a favorable prognosis. (WHO, 2001) -- 2003
APL[accessedResource: NCIt:C3182][accessDate: 04-11-2010]
FAB M3[accessedResource: NCIt:C3182][accessDate: 04-11-2010]
APML - Acute promyelocytic leukemia[accessedResource: NCIt:C3182][accessDate: 04-11-2010]
FAB M3
Promyelocytic Leukemia
Acute Promyelocytic Leukemia with t(15;17)(q22;q12); PML/RARA
APML
Acute Promyelocytic Leukemia with t(15;17)(q22;q12); PML/RARA[accessedResource: NCIt:C3182][accessDate: 04-11-2010]
Promyelocytic Leukemia[accessedResource: NCIt:C3182][accessDate: 04-11-2010]
Tomasz Adamusiak
AML with t(15;17)(q22;q12)
AML with t(15;17)(q22;q12)[accessedResource: NCIt:C3182][accessDate: 04-11-2010]
An acute myeloid leukemia (AML) in which abnormal promyelocytes predominate. It is characterized by the t(15;17)(q22;q12) translocation. There are two variants: the typical and microgranular variant. This AML is particularly sensitive to treatment with all trans-retinoic acid and has a favorable prognosis. (WHO, 2001)[accessedResource: NCIt:C3182][accessDate: 04-11-2010]
APML[accessedResource: NCIt:C3182][accessDate: 04-11-2010]
acute promyelocytic leukemia
APL
NCIt:C3182
James Malone
Jie Zheng
Tomasz Adamusiak
An animal or plant or part thereof that nourishes and supports a parasite either in a lab or natural environment.
host
MO_101
Tomasz Adamusiak
ILSXISS66/TejJ
http://jaxmice.jax.org/strain/009275.html
James Malone
TERV-ST110
nucleus raphes posterior[accessedResource: BTO:0002434][accessDate: 04-11-2010]
posterior raphe nucleus
nucleus raphes dorsalis
Tomasz Adamusiak
NIFSTD:birnlex_982
BTO:0002434
James Malone
Dorsal raphe[accessedResource: NIFSTD:birnlex_982][accessDate: 04-11-2010]
Dorsal raphe
nucleus raphes posterior
A large raphe nucleus extending from the anterior part of the pons through the mesencephalon; its neurons are serotoninergic.
A large raphe nucleus extending from the anterior part of the pons through the mesencephalon; its neurons are serotoninergic.[accessedResource: BTO:0002434][accessDate: 04-11-2010]
nucleus raphes dorsalis[accessedResource: BTO:0002434][accessDate: 04-11-2010]
dorsal raphe nucleus
posterior raphe nucleus[accessedResource: BTO:0002434][accessDate: 04-11-2010]
Not needed.
true
The type of nucleic acid obtained as a result of following a given protocol.
obsolete_nucleic acid extracted
monomethylmercury cation
A methylmercury compound that has formula CH3Hg.
http://www.ebi.ac.uk/efo/EFO_0002730
Tomasz Adamusiak
C[Hg+]
methylmercury ion(1+)
METHYL MERCURY ION
[HgCH3](+)
methylmercury(1+)
Ele Holloway
CHEBI:49747
InChIKey=DBUXSCUEGJMZAE-UHFFFAOYAW
Methylmercury II
[HgMe](+)
methylmercury(II) cation
CH3Hg
InChI=1/CH3.Hg/h1H3;/q;+1
methylmercury
methyltrienolone
(17beta)-17-hydroxy-17-methylestra-4,9,11-trien-3-one
14162
34162
965-93-5
C19H24O2
R1881
Tomasz Adamusiak
rhombomere
ZFA:0001064
MO_795
James Malone
true
Jie Zheng
microsecond
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#us
us
A time unit which is equal to one millionth of a second or 10^[-6] s.
µs
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#us[accessedResource: MO_795][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0001792
A microsecond is a time unit which is equal to one millionth of a second or 10^-6 s.
Tomasz Adamusiak
James Malone
Natural Language Generator 8th April 2010
An epithelial cell derived cell line is defined as something that derives from an epithelial cell.
epithelial cell derived cell line
Ele Holloway
James Malone
DB
Tomasz Adamusiak
shoulder
FMAID:25202
Childhood Oligodendrogliomas
Oligodendrogliomas
Oligodendroblastomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroblastoma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Mixed Astrocytic-Oligodendroglial Neoplasm[accessedResource: NCIt:C4050][accessDate: 10-05-2010]
A WHO grade II tumor composed of a conspicuous mixture of two distinct neoplastic cell types morphologically resembling the tumor cells in oligodendroglioma and diffuse astrocytoma. (WHO)
Oligodendroblastoma
Mixed Oligodendroglioma-Astrocytomas
Mixed Oligo-Astrocytoma[accessedResource: NCIt:C4050][accessDate: 10-05-2010]
Adult Oligodendrogliomas
Mixed Oligodendroglioma-Ependymomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroglioma, Childhood[accessedResource: MSH:D009837][accessDate: 10-05-2010]
WELL DIFFER OLIGODENDROGLIOMA[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Mixed Oligodendroglioma Ependymoma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
A WHO grade II tumor composed of a conspicuous mixture of two distinct neoplastic cell types morphologically resembling the tumor cells in oligodendroglioma and diffuse astrocytoma. (WHO)[accessedResource: NCIt:C4050][accessDate: 10-05-2010]
WHO grade II mixed glioma[accessedResource: DOID:7912][accessDate: 10-05-2010]
Oligoastrocytoma[accessedResource: DOID:7912][accessDate: 10-05-2010]
mixed Oligodendroglioma-astrocytoma
James Malone
Well-Differentiated Oligodendrogliomas
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)
DOID:7912
Mixed Oligodendroglioma Ependymoma
Oligodendroglioma, Childhood
WHO grade II Mixed Glioma
Mixed Oligodendroglioma-Astrocytomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Anaplastic Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligoastrocytoma
Mixed Astrocytic-Oligodendroglial Tumor[accessedResource: NCIt:C4050][accessDate: 10-05-2010]
Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
obsolete_oligoastroglioma
Anaplastic Oligodendroglioma
Oligodendrogliomas, Well-Differentiated[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendrogliomas, Childhood[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroglioma, Anaplastic[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroglioma, Adult
Mixed Oligodendroglioma-Astrocytoma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
true
Mixed Oligodendroglioma-Ependymomas
1.5
Adult Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroblastomas
Mixed Astrocytic-Oligodendroglial Tumor
Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendroglioma, Well Differentiated
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)[accessedResource: MSH:D009837][accessDate: 10-05-2010]
WELL DIFFER OLIGODENDROGLIOMA
Mixed Astrocytic-Oligodendroglial Neoplasm
Mixed Oligo-Astrocytoma
Oligodendroglioma, Well-Differentiated[accessedResource: MSH:D009837][accessDate: 10-05-2010]
Oligodendrogliomas, Anaplastic
Duplicate with oligoastrocytoma (EFO_0000630) use this instead
MSH:D009837
Adult Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 10-05-2010]
NCIt:C4050
Oligodendroglioma
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.[accessedResource: NCIt:C12474][accessDate: 04-11-2010]
B-Lymphocytes
B-Lymphocyte[accessedResource: NCIt:C12474][accessDate: 04-11-2010]
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.
B-Cells
NCIt:C12474
James Malone
A lymphocyte of B lineage with the phenotype CD19-positive and capable of B cell mediated immunity.
B cell
B-Lymphocytes[accessedResource: NCIt:C12474][accessDate: 04-11-2010]
Bursa-Equivalent Lymphocyte[accessedResource: NCIt:C12474][accessDate: 04-11-2010]
CL:0000236
Bursa-Dependent Lymphocytes[accessedResource: NCIt:C12474][accessDate: 04-11-2010]
A lymphocyte of B lineage with the phenotype CD19-positive and capable of B cell mediated immunity.[accessedResource: CL:0000236][accessDate: 04-11-2010]
B lymphocyte
B Cells[accessedResource: NCIt:C12474][accessDate: 04-11-2010]
Bursa-Dependent Lymphocytes
Bursa-Equivalent Lymphocyte
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.
CHEBI:50739
James Malone
http://www.ebi.ac.uk/efo/EFO_0001895
A substance that possess antiestrogenic actions but can also produce estrogenic effects as well. It acts as complete or partial agonist or as antagonist. It can be either steroidal or nonsteroidal in structure.
estrogen receptor modulator
The snail shell-shaped auditory component of the inner ear. It contains the sensory organ of hearing.
EV:0100363
Cochlear
The snail shell-shaped auditory component of the inner ear. It contains the sensory organ of hearing.[accessedResource: NCIt:C12395][accessDate: 04-11-2010]
MA:0000240
Cochlear Organ[accessedResource: NCIt:C12395][accessDate: 04-11-2010]
James Malone
A division of the bony labyrinth of the inner ear of higher vertebrates that is usually coiled like a snail shell and is the seat of the hearing organ.
EMAPA:17597
MAT:0000144
SAEL:21
A division of the bony labyrinth of the inner ear of higher vertebrates that is usually coiled like a snail shell and is the seat of the hearing organ.[accessedResource: BTO:0000267][accessDate: 04-11-2010]
Cochlear[accessedResource: NCIt:C12395][accessDate: 04-11-2010]
EHDAA:4716
Cochlea[accessedResource: FMAID:60201][accessDate: 04-11-2010]
NCIt:C12395
Cochlear Organ
BTO:0000267
Cochlear part of bony labyrinth
Tomasz Adamusiak
Cochlea
cochlea structure
FMAID:60201
NIFSTD:birnlex_1190
XAO:0000197
A malignant, invasive embryonal neoplasm arising from the cerebellum. It occurs predominantly in children and has the tendency to metastasize via the cerebrospinal fluid pathways. Signs and symptoms include truncal ataxia, disturbed gait, lethargy, headache, and vomiting. There are four histologic variants: classic medulloblastoma, desmoplastic medulloblastoma, large cell medulloblastoma, and medulloblastoma with extensive nodularity and advanced neuronal differentiation. (from NCI Thesuarus)
medulloblastoma
dichloroacetate
13425-80-4
ZFA:0001215
The largest subdivision of the diencephalon that consists chiefly of an ovoid mass of nuclei in each lateral wall of the third ventricle and functions in the integration of sensory information.
NIFSTD:birnlex_954
The largest subdivision of the diencephalon that consists chiefly of an ovoid mass of nuclei in each lateral wall of the third ventricle and functions in the integration of sensory information.[accessedResource: BTO:0001365][accessDate: 04-11-2010]
Dorsal thalamus
future thalamus[accessedResource: MAT:0000109][accessDate: 04-11-2010]
thalami
EHDAA:3482
TAO:0001215
SAEL:105
EMAPA:17540
FMAID:62007
MA:0000179
Tomasz Adamusiak
BTO:0001365
EV:0100195
thalamus
MAT:0000109
James Malone
Dorsal thalamus (Anthoney)[accessedResource: FMAID:62007][accessDate: 04-11-2010]
Dorsal thalamus[accessedResource: FMAID:62007][accessDate: 04-11-2010]
thalami[accessedResource: ZFA:0001215][accessDate: 04-11-2010]
Dorsal thalamus (Anthoney)
future thalamus
Multi-tissue structure that is paired, and is situated one on either side of and forming part of the lateral wall of the third ventricle.
Multi-tissue structure that is paired, and is situated one on either side of and forming part of the lateral wall of the third ventricle.[accessedResource: ZFA:0001215][accessDate: 04-11-2010]
A medial cleft or depression dividing the left and right protocerebrum and containing numerous large and small somata of neurosecretory and neuromodulatory neurons.[accessedResource: FBbt:00005802][accessDate: 04-11-2010]
James Malone
A medial cleft or depression dividing the left and right protocerebrum and containing numerous large and small somata of neurosecretory and neuromodulatory neurons.
pars intercerebralis
FBbt:00005802
MAT:0000337
MA:0000347
EMAPA:18870
A fleshy movable process of the floor of the mouths of most vertebrates that bears sensory end organs and small glands and functions especially in taking and swallowing food and in humans as a speech organ.[accessedResource: BTO:0001385][accessDate: 04-11-2010]
EHDAA:9144
MAT:0000040
SAEL:109
XAO:0000446
James Malone
BTO:0001385
A fleshy movable process of the floor of the mouths of most vertebrates that bears sensory end organs and small glands and functions especially in taking and swallowing food and in humans as a speech organ.
EV:0100058
FMAID:54640
tongue
James Malone
http://www.ebi.ac.uk/efo/EFO_0001445
A data set is an information entity that is an aggregate of other information entities that have something in common and are considered to form a unit.
data set
An agent that selectively binds to and activates beta-adrenergic receptors.
http://www.ebi.ac.uk/efo/EFO_0001843
beta-adrenergic agonist
beta-adrenoceptor agonists
beta-adrenergic agonists
James Malone
beta-adrenergic receptor agonist
CHEBI:35522
James Malone
dorsal histoblast nest abdominal
FBbt:00001791
Ele Holloway
James Malone
NAMALWA
AMP[accessedResource: FBbt:00000449][accessDate: 04-11-2010]
spindle cells[accessedResource: FBbt:00000449][accessDate: 04-11-2010]
James Malone
adult midgut precursor
FBbt:00000449
AMP
spindle cells
true
A dimensionless ratio unit which denotes numbers as fractions of 100.
percent
%
James Malone
aerial part
aerial tissue[accessedResource: BTO:0001658][accessDate: 04-11-2010]
aerial tissue
aerial body
Existing or growing in the air rather than in the ground or in water.[accessedResource: BTO:0001658][accessDate: 04-11-2010]
BTO:0001658
Existing or growing in the air rather than in the ground or in water.
aerial body[accessedResource: BTO:0001658][accessDate: 04-11-2010]
unit per milliliter
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Unit_per_Milliliter
U/ml
James Malone
metabolic syndrome
immature T-lymphocyte[accessedResource: CL:0000893][accessDate: 04-11-2010]
A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.
thymocyte
thymic lymphocyte
thymic lymphocyte[accessedResource: CL:0000893][accessDate: 04-11-2010]
mature T cell
CL:0000893
T-lymphocyte[accessedResource: CL:0000084][accessDate: 04-11-2010]
T-cell[accessedResource: CL:0000084][accessDate: 04-11-2010]
Tomasz Adamusiak
immature T lymphocyte
immature T-cell
immature T cell[accessedResource: CL:0000893][accessDate: 04-11-2010]
An immature T cell located in the thymus.[accessedResource: CL:0000893][accessDate: 04-11-2010]
An immature T cell located in the thymus.
T cell
mature T cell[accessedResource: CL:0000084][accessDate: 04-11-2010]
A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.[accessedResource: CL:0000084][accessDate: 04-11-2010]
T-lymphocyte
CL:0000084
James Malone
293TsiLL
Jie Zheng
Tomasz Adamusiak
Athero-protected regions of aorta.
undisturbed flow regions
https://www.cbil.upenn.edu/RADQuerier/php/displayStudy.php?study_id=449
The lateral prominence of the pelvis from the waist to the thigh.[accessedResource: C64193][accessDate: 04-11-2010]
C64193
BTO:0001457
The lateral prominence of the pelvis from the waist to the thigh.
hip
The laterally projecting region of each side of the lower or posterior part of the mammalian trunk formed by the lateral parts of the pelvis and upper part of the femur together with the fleshy parts covering them.[accessedResource: BTO:0001457][accessDate: 04-11-2010]
The hip is an animal body part which is the laterally projecting region of each side of the lower or posterior part of the mammalian trunk formed by the lateral parts of the pelvis and upper part of the femur together with the fleshy parts covering them.
The laterally projecting region of each side of the lower or posterior part of the mammalian trunk formed by the lateral parts of the pelvis and upper part of the femur together with the fleshy parts covering them.
James Malone
James Malone
The pharyngula is a developmental stage in embryonic development which follows the blastula, gastrula and neurula stages.
pharyngula stage
Ele Holloway
James Malone
SNU1
James Malone
Any disease which affects part of the skeletal system.
skeletal system disease
Common variable agammaglobulinaemia[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
acquired Agammaglobulinemia[accessedResource: DOID:12177][accessDate: 04-11-2010]
CVID[accessedResource: DOID:12177][accessDate: 04-11-2010]
GeneRIF:15817684
GeneRIF:16007087
GeneRIF:16007086
acquired hypogammaglobulinemia
Acquired hypogammaglobulinaemia[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
GeneRIF:15598813
COMMON VARIABL IMMUNODEF[accessedResource: ICD9:279.06][accessDate: 04-11-2010]
IMMUNODEFIC COMMON VARIABLE[accessedResource: MSH:D017074][accessDate: 04-11-2010]
Sporadic hypogammaglobulinemia[accessedResource: DOID:12177][accessDate: 04-11-2010]
Heterogeneous group of immunodeficiency syndromes characterized by hypogammaglobulinemia of most isotypes, variable B-cell defects, and the presence of recurrent bacterial infections.[accessedResource: MSH:D017074][accessDate: 04-11-2010]
Common Variable Immunodeficiencies[accessedResource: MSH:D017074][accessDate: 04-11-2010]
MSH:D017074
GeneRIF:15507387
Acquired hypogammaglobulinaemia
CVAG
COMMON VARIABL IMMUNODEF
Late onset immunoglobulin deficiency[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
A primary immunodeficiency characterized by low levels or absence of all the immunoglobulin classes and lack of B-lymphocytes or plasma cells. It results in recurrent bacterial infections. Complications include autoimmune phenomena and cancer development.[accessedResource: NCIt:C26725][accessDate: 04-11-2010]
Common variable hypogammaglobulinaemia[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
CVID - Common variable immunodeficiency
common variable immunodeficiency
A hypogammaglobulinemia that is results in insufficient production of antibodies needed to respond to exposure of pathogens and is characterized by low Ig levels with phenotypically normal B cells that can proliferate but do not develop into Ig-producing cells. Patients with common variable immunodeficiency have marked reduction in serum levels of both immunoglobulin G (IgG) and immunoglobulin A (IgA); about half of these patients also have reduced immunoglobulin M (IgM).
SNOMEDCT:23238000
acquired Agammaglobulinemia
Sporadic hypogammaglobulinemia
Common variable agammaglobulinemia (disorder)
GeneRIF:12100033
Common variable agammaglobulinemia
Common variable agammaglobulinaemia
Common variable hypogammaglobulinaemia
GeneRIF:12759461
Common variable hypogammaglobulinemia
Common variable hypogammaglobulinemia[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
acquired hypogammaglobulinemia[accessedResource: DOID:12177][accessDate: 04-11-2010]
NCIt:C26725
Late onset immunoglobulin deficiency
Heterogeneous group of immunodeficiency syndromes characterized by hypogammaglobulinemia of most isotypes, variable B-cell defects, and the presence of recurrent bacterial infections.
James Malone
CVID - Common variable immunodeficiency[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
CVID
A primary immunodeficiency characterized by low levels or absence of all the immunoglobulin classes and lack of B-lymphocytes or plasma cells. It results in recurrent bacterial infections. Complications include autoimmune phenomena and cancer development.
A hypogammaglobulinemia that is results in insufficient production of antibodies needed to respond to exposure of pathogens and is characterized by low Ig levels with phenotypically normal B cells that can proliferate but do not develop into Ig-producing cells. Patients with common variable immunodeficiency have marked reduction in serum levels of both immunoglobulin G (IgG) and immunoglobulin A (IgA); about half of these patients also have reduced immunoglobulin M (IgM).[accessedResource: DOID:12177][accessDate: 04-11-2010]
COMMON VARIABLE IMMUNODEFIC
CVAG[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
CVI - Common variable immunodeficiency[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
Common Variable Immunodeficiencies
ICD9:279.06
DOID:12177
Common variable agammaglobulinemia (disorder)[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
CVI - Common variable immunodeficiency
Common variable agammaglobulinemia[accessedResource: SNOMEDCT:23238000][accessDate: 04-11-2010]
Tomasz Adamusiak
myoseptum
ZFA:0001089
CHEBI:24852
James Malone
http://www.ebi.ac.uk/efo/EFO_0001825
A substance used to destroy pests of the class Insecta.
insecticide
insecticides
Ele Holloway
James Malone
LS1034
CHEBI:38215
James Malone
http://www.ebi.ac.uk/efo/EFO_0001867
One of a class of drugs that acts by selective inhibition of calcium influx through cell membranes or on the release and binding of calcium in intracellular pools.
calcium channel blocker
calcium channel blockers
James Malone
CS57820 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158844&type=germplasm
CS57820
http://www.arabidopsis.org/servlets/TairObject?id=1005158844&type=germplasm
hormone sexuelle
sex hormones
CHEBI:50112
http://www.ebi.ac.uk/efo/EFO_0001883
sex hormone
James Malone
Any hormone that is responsible for controlling sexual characteristics and reproductive function.
Geschlechtshormone
Sexualhormone
Sexualhormon
hormones sexuelles
Geschlechtshormon
Diseases caused by abnormal function of the MITOCHONDRIA. They may be caused by mutations, acquired or inherited, in mitochondrial DNA or in nuclear genes that code for mitochondrial components. They may also be the result of acquired mitochondria dysfunction due to adverse effects of drugs, infections, or other environmental causes.[accessedResource: MSH:D028361][accessDate: 04-11-2010]
Electron Transport Chain Deficiencies, Mitochondrial[accessedResource: MSH:D028361][accessDate: 04-11-2010]
Deficiency, Oxidative Phosphorylation[accessedResource: MSH:D028361][accessDate: 04-11-2010]
MITOCHONDRIAL DIS[accessedResource: MSH:D028361][accessDate: 04-11-2010]
DOID:700
Deficiencies, Oxidative Phosphorylation[accessedResource: MSH:D028361][accessDate: 04-11-2010]
MSH:D028361
OX PHOS DEFIC
GeneRIF:15571233
MITOCHONDRIAL DIS
ELECTRON TRANSPORT CHAIN DEFIC MITOCHONDRIAL[accessedResource: MSH:D028361][accessDate: 04-11-2010]
mitochondrial disease/disorder[accessedResource: DOID:700][accessDate: 04-11-2010]
GeneRIF:14506721
mitochondrial disease/disorder
Disease, Mitochondrial[accessedResource: MSH:D028361][accessDate: 04-11-2010]
RESPIRATORY CHAIN DEFIC MITOCHONDRIAL
GeneRIF:14746906
Mitochondrial Respiratory Chain Deficiencies[accessedResource: MSH:D028361][accessDate: 04-11-2010]
Mitochondrial Diseases
James Malone
OX PHOS DEFIC[accessedResource: MSH:D028361][accessDate: 04-11-2010]
ELECTRON TRANSPORT CHAIN DEFIC MITOCHONDRIAL
Respiratory Chain Deficiency
GeneRIF:12111367
Deficiency, Respiratory Chain[accessedResource: MSH:D028361][accessDate: 04-11-2010]
hyperglycaemia
Mitochondrial Respiratory Chain Deficiencies
RESPIRATORY CHAIN DEFIC MITOCHONDRIAL[accessedResource: MSH:D028361][accessDate: 04-11-2010]
mitochondrial disease
Mitochondrial Diseases[accessedResource: MSH:D028361][accessDate: 04-11-2010]
Diseases caused by abnormal function of the MITOCHONDRIA. They may be caused by mutations, acquired or inherited, in mitochondrial DNA or in nuclear genes that code for mitochondrial components. They may also be the result of acquired mitochondria dysfunction due to adverse effects of drugs, infections, or other environmental causes.
Mitochondrial Disorders[accessedResource: MSH:D028361][accessDate: 04-11-2010]
Deficiencies, Oxidative Phosphorylation
mitochondrial disorder
Mitochondrial Electron Transport Chain Deficiencies
Deficiency, Oxidative Phosphorylation
Disorders, Mitochondrial
Deficiencies, Respiratory Chain
Deficiencies, Respiratory Chain[accessedResource: MSH:D028361][accessDate: 04-11-2010]
James Malone
true
nanogram per milliliter
ng/ml
Ele Holloway
James Malone
SW620
James Malone
Jie Zheng
Tomasz Adamusiak
Family history is a form of clinicaly history specifically about relevant aspects of genetic preconditions or family member's clinical history.
family history
MO_59
The embryonic product of the germination of a seed; the young shoot and root axis.[accessedResource: BTO:0001228][accessDate: 04-11-2010]
James Malone
The embryonic product of the germination of a seed; the young shoot and root axis.
seedling
BTO:0001228
PO:0008037
Jie Zheng
Tomasz Adamusiak
proximal renal artery
Mycobacterium leprae infection[accessedResource: SNOMEDCT:81004002][accessDate: 04-11-2010]
GeneRIF:15755200
Infection due to Mycobacterium leprae
GeneRIF:12447749
Leprosy NOS (disorder)[accessedResource: SNOMEDCT:186339006][accessDate: 04-11-2010]
ICD9:030.9
Leprosy, unspecified[accessedResource: ICD9:030.9][accessDate: 04-11-2010]
SNOMEDCT:81004002
Leprosy, unspecified
James Malone
LEPROSY NEC[accessedResource: ICD9:030.8][accessDate: 04-11-2010]
[X]Leprosy, unspecified (disorder)[accessedResource: SNOMEDCT:187316006][accessDate: 04-11-2010]
leprosy
ICD9:030.8
DOID:1024
GeneRIF:14737177
Leprosy (disorder)[accessedResource: SNOMEDCT:81004002][accessDate: 04-11-2010]
Other specified leprosy[accessedResource: ICD9:030.8][accessDate: 04-11-2010]
[X]Leprosy, unspecified[accessedResource: SNOMEDCT:187316006][accessDate: 04-11-2010]
Hansen's disease
LEPROSY NEC
Other specified leprosy
[X]Leprosy, unspecified
Leprosy NOS (disorder)
ICD9:030
GeneRIF:12646604
Infection due to Mycobacterium leprae[accessedResource: SNOMEDCT:81004002][accessDate: 04-11-2010]
SNOMEDCT:186339006
Hansen's disease[accessedResource: SNOMEDCT:81004002][accessDate: 04-11-2010]
SNOMEDCT:187316006
GeneRIF:15880118
[X]Leprosy, unspecified (disorder)
GeneRIF:15306847
Leprosy (disorder)
LEPROSY NOS
Leprosy, NOS[accessedResource: SNOMEDCT:81004002][accessDate: 04-11-2010]
GeneRIF:15072129
GeneRIF:15356162
Mycobacterium leprae infection
BTO:0001862
Colliculus of caudate nucleus
accumbens nucleus
FMAID:61889
Nucleus accumbens septi
MAT:0000512
James Malone
A nucleus forming the floor of the caudal part of the anterior prolongation of the lateral ventricle of the brain.[accessedResource: BTO:0001862][accessDate: 04-11-2010]
NCIt:C52733
nucleus accumbens whole
MA:0000892
A nucleus forming the floor of the caudal part of the anterior prolongation of the lateral ventricle of the brain.
Ele Holloway
James Malone
MCIXC
A giant cell 50 to 100 micron in diameter, with a greatly lobulated nucleus, found in the bone marrow; mature blood platelets are released from its cytoplasm.
James Malone
megalocaryocyte[accessedResource: CL:0000556][accessDate: 04-11-2010]
A giant cell 50 to 100 micron in diameter, with a greatly lobulated nucleus, found in the bone marrow; mature blood platelets are released from its cytoplasm.[accessedResource: CL:0000556][accessDate: 04-11-2010]
A large cell that has a lobulated nucleus, is found especially in the bone marrow, and is the source of blood platelets.
megacaryocyte[accessedResource: CL:0000556][accessDate: 04-11-2010]
megalocaryocyte
megakaryocyte
megacaryocyte
megalokaryocyte[accessedResource: CL:0000556][accessDate: 04-11-2010]
megalokaryocyte
BTO:0000843
CL:0000556
A large cell that has a lobulated nucleus, is found especially in the bone marrow, and is the source of blood platelets.[accessedResource: BTO:0000843][accessDate: 04-11-2010]
Iliac[accessedResource: NCIt:C32765][accessDate: 04-11-2010]
The broad, dorsal, upper, and widest of the three principal bones composing either half of the pelvis.[accessedResource: NCIt:C32765][accessDate: 04-11-2010]
Tomasz Adamusiak
The broad, dorsal, upper, and widest of the three principal bones composing either half of the pelvis.
ilium
NCIt:C32765
Iliac
CHEBI:37930
James Malone
http://www.ebi.ac.uk/efo/EFO_0001864
phenothiazine antipsychotic drug
phenothiazine antipsychotic drugs
phenothiazine antipsychotics
phenothiazine neuroleptics
James Malone
Ele Holloway
HCC1599
FBbt:00004783
balancer organ[accessedResource: MAT:0000203][accessDate: 04-11-2010]
MAT:0000203
James Malone
Paired dorsal 'appendage' of the adult mesothoracic segment. It is a freely movable, capitate stalk. It develops from the dorsal mesothoracic disc. It is used for flight balance.[accessedResource: FBbt:00004783][accessDate: 04-11-2010]
balancer organ
Paired dorsal 'appendage' of the adult mesothoracic segment. It is a freely movable, capitate stalk. It develops from the dorsal mesothoracic disc. It is used for flight balance.
haltere
Tomasz Adamusiak
embryonic ventral apodeme
FBbt:00005749
James Malone
dorsomedial neurosecretory cell
FBbt:00004011
James Malone
http://www.ebi.ac.uk/efo/EFO_0002634
Bos taurus, commonly named cattle.
Bos taurus
cow
SUM52PE
James Malone
James Malone
Tomasz Adamusiak
A twin study is a study design in behavior genetics which aid the study of individual differences between genetically identical twins by highlighting the role of environmental and genetic causes on behavior.
twin study
Wikipedia definition, modified by editor.
James Malone
http://www.ebi.ac.uk/efo/EFO_0002644
Mus (commonly mice) is a small mammal belonging to the order of rodents.
Mus
mice
mouse
James Malone
CS57753 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158777&type=germplasm
CS57753
http://www.arabidopsis.org/servlets/TairObject?id=1005158777&type=germplasm
James Malone
embryonic epipharynx
FBbt:00005614
Ele Holloway
James Malone
SW1353
true
James Malone
kilogram
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#kg
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#kg[accessedResource: MO_846][accessDate: 04-11-2010]
kg
Tomasz Adamusiak
http://www.ebi.ac.uk/efo/EFO_0001686
Jie Zheng
A mass unit which is equal to the mass of the International Prototype Kilogram kept by the BIPM at Svres, France.
MO_846
A kilogram is a mass unit which is equal to the mass of the International Prototype Kilogram kept by the BIPM at Svres, France.
James Malone
An extrapolation into the future of data into a class with specified label.
classifier prediction
Ele Holloway
STRUCTURE_ChemicalName_IUPAC:3-[4-(4-phenyl-3,6-dihydropyridin-1(2H)-yl)butyl]-1H-indol-5-ol hydrochloride
CASRN:108050-82-4
STRUCTURE_Formula:C23H27ClN2O
roxindole hydrochloride
James Malone
Tomasz Adamusiak
DSSTox_Generic_SID:42605
DSSTox_CID:22605
James Malone
human granulocytic anaplasmosis
MedlinePlus: 001381
NCI Metathesaurus: C0483368
Human granulocytic ehrlichiosis
Ele Holloway
James Malone
supraoptic nucleus
true
A derived unit which is a standard measure of the energy imparted by ionizing radiation to unit mass of matter such as tissue.
abosrbed dose unit
absorbed dose unit
James Malone
MAT:0000278
paired fin skeleton
Skeletal system that consists of the paired fins (pectoral or pelvic fins).
OntologyMappingImporter following MAT:0000278
appendicular skeleton[accessedResource: TAO:0000027][accessDate: 04-11-2010]
Skeletal system that consists of the paired fins (pectoral or pelvic fins).[accessedResource: TAO:0000027][accessDate: 04-11-2010]
TAO:0000027
appendicular skeleton
ZFA:0000027
James Malone
B6.Cg-Tg(SOD1-G93A)1Gur/J is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/004435.html
B6.Cg-Tg(SOD1-G93A)1Gur/J
JAX:004435
James Malone
segmentation stage
Hypopituitarism NOS
hypopituitarism
Hypopituitarism NOS (disorder)[accessedResource: SNOMEDCT:237681002][accessDate: 04-11-2010]
Hyposecretion, Adenohypophyseal
Syndrome, Sheehan
Panhypopituitarism
Hypopituitarism: [NOS] or [Sheehan's syndrome] or [Simmond's disease] or [Panhypopituitarism][accessedResource: DOID:9406][accessDate: 04-11-2010]
Hypopituitarism (disorder)[accessedResource: DOID:9406][accessDate: 04-11-2010]
Diminution or cessation of secretion of one or more hormones from the anterior pituitary gland (including LH; FOLLICLE STIMULATING HORMONE; SOMATOTROPIN; and CORTICOTROPIN). This may result from surgical or radiation ablation, non-secretory PITUITARY NEOPLASMS, metastatic tumors, infarction, PITUITARY APOPLEXY, infiltrative or granulomatous processes, and other conditions.[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Pituitary failure
Syndrome, Sheehan[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Panhypopituitarism, Postpartum[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Disease, Simmonds
A condition of diminution or cessation of secretion of one or more hormones from the anterior pituitary gland. This may result from surgical or radiation ablation, non-secretory pituitary neoplasms, metastatic tumors, infarction, pituitary apoplexy, infiltrative or granulomatous processes, and other conditions.
James Malone
Deficient secretion of one OR more pituitary hormones[accessedResource: SNOMEDCT:74728003][accessDate: 04-11-2010]
Sheehans Syndrome
Syndrome, Sheehan's
MSH:D007018
Pituitary deficiency
Pituitary Insufficiency, Postpartum[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Pituitary deficiency[accessedResource: SNOMEDCT:74728003][accessDate: 04-11-2010]
Pituitary hypofunction[accessedResource: SNOMEDCT:74728003][accessDate: 04-11-2010]
Postpartum Pituitary Insufficiency
DOID:9406
Sheehans Syndrome[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Anterior Pituitary Hyposecretion Syndrome[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Syndrome, Sheehan's[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Diminution or cessation of secretion of one or more hormones from the anterior pituitary gland (including LH; FOLLICLE STIMULATING HORMONE; SOMATOTROPIN; and CORTICOTROPIN). This may result from surgical or radiation ablation, non-secretory PITUITARY NEOPLASMS, metastatic tumors, infarction, PITUITARY APOPLEXY, infiltrative or granulomatous processes, and other conditions.
Pituitary insufficiency NOS[accessedResource: DOID:9406][accessDate: 04-11-2010]
Hypopituitarism (disorder)
Pituitary insufficiency, NOS
GeneRIF:14581620
SNOMEDCT:74728003
SIMMONDS DIS
Pituitary Insufficiency[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Pituitary hypofunction
Hyposecretion, Adenohypophyseal[accessedResource: MSH:D007018][accessDate: 04-11-2010]
GeneRIF:12651888
GeneRIF:15800844
HYPOSECRET SYNDROME ANTERIOR PITUITARY[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Simmonds Disease[accessedResource: MSH:D007018][accessDate: 04-11-2010]
ADENOHYPOPHYSEAL HYPOSECRET
ADENOHYPOPHYSEAL HYPOSECRET[accessedResource: MSH:D007018][accessDate: 04-11-2010]
GeneRIF:12717343
GeneRIF:14714741
Hypopituitarism, Postpartum
Hypopituitarism: [NOS] or [Sheehan's syndrome] or [Simmond's disease] or [Panhypopituitarism]
SNOMEDCT:237681002
Hyposecretion Syndrome, Anterior Pituitary
Hypopituitarism NOS (disorder)
HYPOSECRET SYNDROME ANTERIOR PITUITARY
GeneRIF:15928241
Deficient secretion of one OR more pituitary hormones
A condition of diminution or cessation of secretion of one or more hormones from the anterior pituitary gland. This may result from surgical or radiation ablation, non-secretory pituitary neoplasms, metastatic tumors, infarction, pituitary apoplexy, infiltrative or granulomatous processes, and other conditions.[accessedResource: NCIt:C62591][accessDate: 04-11-2010]
Panhypopituitarism, Postpartum
NCIt:C62591
Panhypopituitarism[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Simmond's Disease
Insufficiency, Pituitary
SIMMONDS DIS[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Pituitary failure[accessedResource: SNOMEDCT:74728003][accessDate: 04-11-2010]
Hypopituitarism NOS[accessedResource: SNOMEDCT:237681002][accessDate: 04-11-2010]
Hypopituitarism, Postpartum[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Simmond's Disease[accessedResource: MSH:D007018][accessDate: 04-11-2010]
Anaplastic Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Mixed Astrocytic-Oligodendroglial Neoplasm[accessedResource: NCIt:C4050][accessDate: 04-11-2010]
Oligodendrogliomas, Adult[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Mixed Oligo-Astrocytoma[accessedResource: NCIt:C4050][accessDate: 04-11-2010]
Mixed Oligodendroglioma Astrocytoma[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Well-Differentiated Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroglioma-Astrocytoma, Mixed
NCIt:C4050
WHO Grade II Mixed Glioma
A WHO grade II tumor composed of a conspicuous mixture of two distinct neoplastic cell types morphologically resembling the tumor cells in oligodendroglioma and diffuse astrocytoma. (WHO)[accessedResource: NCIt:C4050][accessDate: 04-11-2010]
WELL DIFFER OLIGODENDROGLIOMA[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Mixed Oligodendroglioma-Astrocytomas
Mixed Astrocytic-Oligodendroglial Neoplasm
Well-Differentiated Oligodendroglioma
Oligodendroglioma, Well-Differentiated[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Adult Oligodendroglioma
Mixed Oligodendroglioma-Ependymomas
Oligodendrogliomas, Childhood[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Adult Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroblastomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendrogliomas, Adult
WELL DIFFER OLIGODENDROGLIOMA
Mixed Oligodendroglioma Ependymoma
Oligodendroglioma, Childhood
Oligodendroglioma-Ependymoma, Mixed[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroblastoma
Oligodendrogliomas, Anaplastic
Anaplastic Oligodendroglioma[accessedResource: MSH:D009837][accessDate: 04-11-2010]
WHO grade II mixed glioma[accessedResource: DOID:7912][accessDate: 04-11-2010]
MSH:D009837
Oligodendrogliomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroblastoma[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Mixed Astrocytic-Oligodendroglial Tumor
Oligodendrogliomas
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)
DOID:7912
Mixed Oligo-Astrocytoma
Oligodendroglioma-Astrocytomas, Mixed[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendrogliomas, Childhood
oligoastroglioma
Oligodendroglioma, Childhood[accessedResource: MSH:D009837][accessDate: 04-11-2010]
A relatively slow-growing glioma that is derived from oligodendrocytes and tends to occur in the cerebral hemispheres, thalamus, or lateral ventricle. They may present at any age, but are most frequent in the third to fifth decades, with an earlier incidence peak in the first decade. Histologically, these tumors are encapsulated, relatively avascular, and tend to form cysts and microcalcifications. Neoplastic cells tend to have small round nuclei surrounded by unstained nuclei. The tumors may vary from well-differentiated to highly anaplastic forms. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2052; Adams et al., Principles of Neurology, 6th ed, p655)[accessedResource: MSH:D009837][accessDate: 04-11-2010]
Oligodendroglioma
James Malone
Anaplastic Oligodendroglioma
Oligodendroblastomas
Well-Differentiated Oligodendrogliomas
Mixed Oligodendroglioma-Ependymomas[accessedResource: MSH:D009837][accessDate: 04-11-2010]
A WHO grade II tumor composed of a conspicuous mixture of two distinct neoplastic cell types morphologically resembling the tumor cells in oligodendroglioma and diffuse astrocytoma. (WHO)
Mixed Astrocytic-Oligodendroglial Tumor[accessedResource: NCIt:C4050][accessDate: 04-11-2010]
oligoastrocytoma
FMAID:83902
BTO:0001793
Multi-tissue structure that is the dorsal part of the midbrain and develops from the alar plate and is the most complex layered structure in the zebrafish brain.[accessedResource: ZFA:0001353][accessDate: 04-11-2010]
Neuraxis tectum[accessedResource: FMAID:83902][accessDate: 04-11-2010]
Midbrain tectum[accessedResource: FMAID:83902][accessDate: 04-11-2010]
James Malone
Midbrain tectum
MAT:0000451
The dorsal part of the midbrain including the corpora quadrigemina.[accessedResource: BTO:0001793][accessDate: 04-11-2010]
mesencephalic tectum
tectum opticum[accessedResource: ZFA:0001353][accessDate: 04-11-2010]
tectum
tectal lobe
The dorsal part of the midbrain including the corpora quadrigemina.
tectum mesencephali[accessedResource: BTO:0001793][accessDate: 04-11-2010]
Multi-tissue structure that is the dorsal part of the midbrain and develops from the alar plate and is the most complex layered structure in the zebrafish brain.
Neuraxis tectum
MA:0000211
optic tectum
EMAPA:19051
MFO:0080060
ZFA:0001353
dorsal midbrain
tectum mesencephali
tectum opticum
mesencephalic tectum[accessedResource: TAO:0001353][accessDate: 04-11-2010]
tectal lobe[accessedResource: ZFA:0001353][accessDate: 04-11-2010]
optic tectum[accessedResource: ZFA:0001353][accessDate: 04-11-2010]
TAO:0001353
dorsal midbrain[accessedResource: ZFA:0001353][accessDate: 04-11-2010]
DOID:678
Progressive Supranuclear Ophthalmoplegia[accessedResource: NIFSTD:birnlex_12697][accessDate: 04-11-2010]
Steele-Richardson-Olszewski Disease[accessedResource: NIFSTD:birnlex_12697][accessDate: 04-11-2010]
supranuclear palsy, progressive
progressive supranuclear ophthalmoplegia (disorder)[accessedResource: DOID:678][accessDate: 04-11-2010]
NIFSTD:birnlex_12697
A degenerative disease of the central nervous system characterized by balance difficulties; OCULAR MOTILITY DISORDERS (supranuclear ophthalmoplegia); DYSARTHRIA; swallowing difficulties; and axial DYSTONIA. Onset is usually in the fifth decade and disease progression occurs over several years. Pathologic findings include neurofibrillary degeneration and neuronal loss in the dorsal MESENCEPHALON; SUBTHALAMIC NUCLEUS; RED NUCLEUS; pallidum; dentate nucleus; and vestibular nuclei (MeSH).
Ele Holloway
A degenerative disease of the central nervous system characterized by balance difficulties; OCULAR MOTILITY DISORDERS (supranuclear ophthalmoplegia); DYSARTHRIA; swallowing difficulties; and axial DYSTONIA. Onset is usually in the fifth decade and disease progression occurs over several years. Pathologic findings include neurofibrillary degeneration and neuronal loss in the dorsal MESENCEPHALON; SUBTHALAMIC NUCLEUS; RED NUCLEUS; pallidum; dentate nucleus; and vestibular nuclei (MeSH).[accessedResource: NIFSTD:birnlex_12697][accessDate: 04-11-2010]
Steele-Richardson-Olszewski Syndrome
progressive supranuclear ophthalmoplegia
Tomasz Adamusiak
James Malone
Steele-Richardson-Olszewski Syndrome[accessedResource: NIFSTD:birnlex_12697][accessDate: 04-11-2010]
progressive supranuclear ophthalmoplegia (disorder)
Steele-Richardson-Olszewski Disease
James Malone
Syracuse High Avoidance
RGD:1578695
methapyrilene
23278
3278
91-80-5
C14H19N3S
N,N-dimethyl-N'-pyridin-2-yl-N'-(2-thienylmethyl)ethane-1,2-diamine
myeloid neoplasm
Ele Holloway
James Malone
PC-6
InChI=1/Ca.2ClH/h;2*1H/q+2;;/p-2/fCa.2Cl/h;2*1h/qm;2*-1
calcium dichloride
calcium chloride
CaCl2
Calcium chloride anhydrous
An inorganic chloride salt that has formula CaCl2.
[Cl-].[Cl-].[Ca++]
InChIKey=UXVMQQNJUSDDNG-HQDHFEKBCV
Tomasz Adamusiak
ILSXISS23/TejJ
http://jaxmice.jax.org/strain/009265.html
cycloheximide
24882
4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione
4882
66-81-9
C15H23NO4
CHX
A connective tissue cell of an organ found in the loose connective tissue. These are most often associated with the uterine mucosa and the ovary as well as the hematopoietic system and elsewhere.[accessedResource: CL:0000499][accessDate: 04-11-2010]
Tomasz Adamusiak
A connective tissue cell of an organ found in the loose connective tissue. These are most often associated with the uterine mucosa and the ovary as well as the hematopoietic system and elsewhere.
stromal cell
CL:0000499
http://www.ebi.ac.uk/efo/EFO_0002399
Ele Holloway
aluminium
aluminium atom
aluminum
James Malone
[Al]
A boron group element that has formula Al.
CHEBI:28984
InChI=1/Al
InChIKey=XAGFODPZIPBFFR-UHFFFAOYAX
aluminio
13Al
A boron group element atom that has formula Al.
James Malone
ZEA:0015178
A matured ovule containing an embryo and food supply and covered by a seed coat.[accessedResource: BTO:0001226][accessDate: 04-11-2010]
MAT:0000008
GRO:0005339
BTO:0001226
PO:0009010
seed[accessedResource: MAT:0000008][accessDate: 04-11-2010]
seed structure
A matured ovule containing an embryo and food supply and covered by a seed coat.
GRO:0005339[accessedResource: BTO:0001226][accessDate: 04-11-2010]
seed
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#array_scanner[accessedResource: MO_824][accessDate: 04-11-2010]
James Malone
http://www.ebi.ac.uk/efo/EFO_0002014
An processed material which acquires images of fluorescence (induced with lasers) from labeled molecules on the surface of the microarray chip
array scanner
MO_824
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#array_scanner
oropharynx
Oral part of pharynx[accessedResource: FMA:54879][accessDate: 04-11-2010]
NCIt:C12762
FMA:54879
The part of the pharynx between the soft palate and the upper portion of the epiglottis.[accessedResource: NCIt:C12762][accessDate: 04-11-2010]
James Malone
The part of the pharynx between the soft palate and the upper portion of the epiglottis.
Oral part of pharynx
James Malone
CS57641 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158665&type=germplasm
CS57641
http://www.arabidopsis.org/servlets/TairObject?id=1005158665&type=germplasm
GeneRIF:12032588
GeneRIF:12428213
Limb-girdle muscular dystrophy (disorder)
GeneRIF:11741828
Leyden-Mbius muscular dystrophy
GeneRIF:11822024
Muscular Dystrophies, Limb Girdle
obsolete_calpainopathy
GeneRIF:12499399
Leyden-Mobius muscular dystrophy
MSH:D049288
Limb-girdle muscular dystrophy (disorder)[accessedResource: SNOMEDCT:93153005][accessDate: 10-05-2010]
limb girdle muscular dystrophy
A heterogenous group of inherited muscular dystrophy that can be autosomal dominant or autosomal recessive. There are many forms (called LGMDs) involving genes encoding muscle membrane proteins such as the sarcoglycan (SARCOGLYCANS) complex that interacts with DYSTROPHIN. The disease is characterized by progressing wasting and weakness of the proximal muscles of arms and legs around the HIPS and SHOULDERS (the pelvic and shoulder girdles).[accessedResource: MSH:D049288][accessDate: 10-05-2010]
Limb Girdle Muscular Dystrophy[accessedResource: MSH:D049288][accessDate: 10-05-2010]
James Malone
GeneRIF:16344347
GeneRIF:14981167
true
GeneRIF:11891182
Leyden-Mobius muscular dystrophy[accessedResource: SNOMEDCT:93153005][accessDate: 10-05-2010]
A heterogenous group of inherited muscular dystrophy that can be autosomal dominant or autosomal recessive. There are many forms (called LGMDs) involving genes encoding muscle membrane proteins such as the sarcoglycan (SARCOGLYCANS) complex that interacts with DYSTROPHIN. The disease is characterized by progressing wasting and weakness of the proximal muscles of arms and legs around the HIPS and SHOULDERS (the pelvic and shoulder girdles).
limb-girdle muscular dystrophy type 2A
1.8
duplicate of limb-girdle muscular dystrophy EFO_0000758
DOID:11724
Limb-Girdle Muscular Dystrophies[accessedResource: MSH:D049288][accessDate: 10-05-2010]
GeneRIF:15087111
GeneRIF:15351423
Leyden-Mbius muscular dystrophy[accessedResource: DOID:11724][accessDate: 10-05-2010]
GeneRIF:15385448
GeneRIF:14600260
SNOMEDCT:93153005
Apo-Tamox
CHEBI:41774
(Z)-2-(4-(1,2-Diphenyl-1-butenyl)phenoxy)-N,N-dimethylethanamine
InChI=1/C26H29NO/c1-4-25(21-11-7-5-8-12-21)26(22-13-9-6-10-14-22)23-15-17-24(18-16-23)28-20-19-27(2)3/h5-18H,4,19-20H2,1-3H3/b26-25-
A tertiary amine that has formula C26H29NO.
1-p-beta-Dimethylaminoethoxyphenyl-trans-1,2-diphenylbut-1-ene
(Z)-2-(para-(1,2-Diphenyl-1-butenyl)phenoxy)-N,N-dimethylamine
InChIKey=NKANXQFJJICGDU-QPLCGJKRBF
C26H29NO
2-{4-[(1Z)-1,2-diphenylbut-1-en-1-yl]phenoxy}-N,N-dimethylethanamine
http://www.ebi.ac.uk/efo/EFO_0001621
Diemon
tamoxifen
1-para-beta-Dimethylaminoethoxyphenyl-trans-1,2-diphenylbut-1-ene
tamoxifeno
tamoxifene
James Malone
trans-Tamoxifen
tamoxifenum
Crisafeno
CC\\C(c1ccccc1)=C(/c1ccccc1)c1ccc(OCCN(C)C)cc1
Peyers Patch (MMHCC)
Any of numerous large oval patches of closely aggregated nodules of lymphoid tissue in the walls of the small intestine esp. in the ileum that partially or entirely disappear in advanced life and in typhoid fever become the seat of ulcers which may perforate the intestines.
Any of numerous large oval patches of closely aggregated nodules of lymphoid tissue in the walls of the small intestine esp. in the ileum that partially or entirely disappear in advanced life and in typhoid fever become the seat of ulcers which may perforate the intestines.[accessedResource: BTO:0001784][accessDate: 04-11-2010]
James Malone
Peyer's patch
NCIt:C22562
Peyer's gland[accessedResource: BTO:0001784][accessDate: 04-11-2010]
Peyers Patch (MMHCC)[accessedResource: NCIt:C22562][accessDate: 04-11-2010]
Peyer's gland
BTO:0001784
WBbt:0005748
Digestive system
MAT:0000018
gastrointestinal system[accessedResource: MAT:0000018][accessDate: 04-11-2010]
alimentary system
The organ system involved in the absorption of nutrients.
TAO:0000339
EHDAA:514
MA:0000323
digestive system component
FMAID:7152
digestive system[accessedResource: FBbt:00005055][accessDate: 04-11-2010]
ZFA:0000339
The organ system involved in the absorption of nutrients.[accessedResource: FBbt:00005055][accessDate: 04-11-2010]
James Malone
FBbt:00005055
Alimentary system[accessedResource: FMAID:7152][accessDate: 04-11-2010]
TADS:0000170
EV:0100056
gastrointestinal system
SAEL:28
AAO:0000129
XAO:0000125
EMAPA:16246
MFO:0002980
James Malone
by a caterpillar on a plant leaf
A measurement of physical damage, e.g. by a caterpillar on a plant leaf
damage intensity
Tomasz Adamusiak
lateral cord neuron
FBbt:00005675
true
A dimensionless concentration notation which denotes the amount of a given substance in a total amount of 1,000,000,000 regardless of the units of measure as long as they are the same or 1 part in 10^[9].
parts per billion
10^[-9]
ppb
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#RNA_stability_design[accessedResource: MO_553][accessDate: 04-11-2010]
Tomasz Adamusiak
RNA stability design
MO_553
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#RNA_stability_design
population
NIFSTD:sao2254405550
James Malone
Tomasz Adamusiak
A collection of independent organismal entities engaged in some form of spatio-temporal interaction or aggregate behavior[accessedResource: NIFSTD:sao2254405550][accessDate: 04-11-2010]
true
http://www.ebi.ac.uk/efo/EFO_0000664
a population is a collection of individuals from the same taxonomic class living, counted or sampled at a particular site or in a particular area
A collection of independent organismal entities engaged in some form of spatio-temporal interaction or aggregate behavior
A population is a material entity consisting of individuals which share a particular characteristic such as inhabiting a particular region or area or ability to interbreed.
Muscular Dystrophies, Pseudohypertrophic[accessedResource: MSH:D020388][accessDate: 04-11-2010]
Duchenne musc. dyst.
GeneRIF:14631123
GeneRIF:16295426
Duchenne muscular dystrophy (disorder)[accessedResource: SNOMEDCT:76670001][accessDate: 04-11-2010]
Duchenne musc. dyst.[accessedResource: DOID:11723][accessDate: 04-11-2010]
GeneRIF:12459784
GeneRIF:11922612
GeneRIF:12754707
GeneRIF:12920092
GeneRIF:12031623
DOID:11723
GeneRIF:15616792
Pseudohypertrophic muscular dystrophy[accessedResource: SNOMEDCT:76670001][accessDate: 04-11-2010]
Duchenne muscular dystrophy (disorder)
GeneRIF:12619170
Muscular Dystrophy, Becker
GeneRIF:15328150
Dystrophies, Pseudohypertrophic Muscular
GeneRIF:12609501
GeneRIF:12754415
Duchenne Type Progressive Muscular Dystrophy
GeneRIF:14511675
An X-linked recessive muscle disease caused by an inability to synthesize DYSTROPHIN, which is involved with maintaining the integrity of the sarcolemma. Muscle fibers undergo a process that features degeneration and regeneration. Clinical manifestations include proximal weakness in the first few years of life, pseudohypertrophy, cardiomyopathy (see MYOCARDIAL DISEASES), and an increased incidence of impaired mentation. Becker muscular dystrophy is a closely related condition featuring a later onset of disease (usually adolescence) and a slowly progressive course. (Adams et al., Principles of Neurology, 6th ed, p1415)[accessedResource: MSH:D020388][accessDate: 04-11-2010]
SNOMEDCT:76670001
DMD - Duchenne muscular dystrophy
GeneRIF:12798793
Muscular Dystrophy, Pseudohypertrophic
DMD - Duchenne muscular dystrophy[accessedResource: SNOMEDCT:76670001][accessDate: 04-11-2010]
GeneRIF:14652441
Childhood Muscular Dystrophy, Pseudohypertrophic
GeneRIF:11968010
GeneRIF:12206800
GeneRIF:15111323
Becker Muscular Dystrophy[accessedResource: MSH:D020388][accessDate: 04-11-2010]
An X-linked recessive muscle disease caused by an inability to synthesize DYSTROPHIN, which is involved with maintaining the integrity of the sarcolemma. Muscle fibers undergo a process that features degeneration and regeneration. Clinical manifestations include proximal weakness in the first few years of life, pseudohypertrophy, cardiomyopathy (see MYOCARDIAL DISEASES), and an increased incidence of impaired mentation. Becker muscular dystrophy is a closely related condition featuring a later onset of disease (usually adolescence) and a slowly progressive course. (Adams et al., Principles of Neurology, 6th ed, p1415)
Progressive Muscular Dystrophy, Duchenne Type[accessedResource: MSH:D020388][accessDate: 04-11-2010]
Duchenne muscular dystrophy
GeneRIF:12387876
MSH:D020388
James Malone
Childhood Pseudohypertrophic Muscular Dystrophy[accessedResource: MSH:D020388][accessDate: 04-11-2010]
diaphragm
BTO:0000341
EHDAA:4104
FMAID:13295
EV:0100376
future diaphragm
diaphragm muscle
MAT:0000502
Thoracic diaphragm[accessedResource: FMAID:13295][accessDate: 04-11-2010]
The thin muscle below the lungs and heart that separates the chest from the abdomen.
future diaphragm[accessedResource: MAT:0000502][accessDate: 04-11-2010]
Thoracic diaphragm
EMAPA:17701
diaphragm muscle[accessedResource: BTO:0000341][accessDate: 04-11-2010]
The thin muscle below the lungs and heart that separates the chest from the abdomen.[accessedResource: BTO:0000341][accessDate: 04-11-2010]
James Malone
Ele Holloway
James Malone
NCI-H1651
acido kainico
L-alpha-kainic acid
http://www.ebi.ac.uk/efo/EFO_0001561
InChIKey=VLSMHEGGTFMBBZ-WODSAOQMDB
A pyrrolidinemonocarboxylic acid that has formula C10H15NO4.
(3S,4R)-3-(carboxymethyl)-4-(prop-1-en-2-yl)-L-proline
digenic acid
(2S-(2alpha,3beta,4beta))-2-carboxy-4-(1-methylethenyl)-3-pyrrolidineacetic acid
acide kainique
kainic acid
CC(=C)[C@H]1CN[C@@H]([C@H]1CC(O)=O)C(O)=O
CHEBI:31746
acidum kainicum
Helminal
alpha-Kainic acid
James Malone
Digenin
Kainsaeure
Digensaeure
InChI=1/C10H15NO4/c1-5(2)7-4-11-9(10(14)15)6(7)3-8(12)13/h6-7,9,11H,1,3-4H2,2H3,(H,12,13)(H,14,15)/t6-,7+,9-/m0/s1/f/h12,14H
DBTRG-05MG
James Malone
DBTRG05MG
lycopersicin
InChI=1/C50H83NO21/c1-20-7-12-50(51-15-20)21(2)32-28(72-50)14-26-24-6-5-22-13-23(8-10-48(22,3)25(24)9-11-49(26,32)4)65-45-40(63)37(60)41(31(18-54)68-45)69-47-43(71-46-39(62)36(59)34(57)29(16-52)66-46)42(35(58)30(17-53)67-47)70-44-38(61)33(56)27(55)19-64-44/h20-47,51-63H,5-19H2,1-4H3/t20-,21-,22-,23-,24+,25-,26-,27+,28-,29+,30+,31+,32-,33-,34+,35+,36-,37+,38+,39+,40+,41-,42-,43+,44-,45+,46-,47-,48-,49-,50-/m0/s1
alpha-tomatine
tomatine
CHEBI:9630
(3beta,5alpha,22beta,25S)-spirosolan-3-yl O-beta-D-glucopyranosyl-(1->2)-O-(beta-D-xylopyranosyl)-(1->3)-O-beta-D-glucopyranosyl-(1->4)-beta-D-galactopyranoside
James Malone
[H][C@@]12CC[C@]3([H])[C@]([H])(CC[C@@]4(C)[C@@]3([H])C[C@]3([H])O[C@@]5(CC[C@H](C)CN5)[C@@H](C)[C@]43[H])[C@@]1(C)CC[C@@H](C2)O[C@@H]1O[C@H](CO)[C@H](O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O[C@@H]3OC[C@@H](O)[C@H](O)[C@H]3O)[C@H]2O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O
A spirostanyl glycoside that has formula C50H83NO21.
http://www.ebi.ac.uk/efo/EFO_0001628
A''-Tomatidine
C50H83NO21
(22S,25S)-5alpha-spirosolan-3beta-yl beta-D-glucopyranosyl-(1->2)-[beta-D-xylopyranosyl-(1->3)]-beta-D-glucopyranosyl-(1->4)-beta-D-galactopyranoside
InChIKey=REJLGAUYTKNVJM-SGXCCWNXBK
Tomasz Adamusiak
mesenchyme derived from head mesoderm
ZFA:0000998
Tomasz Adamusiak
renal glomerulus
ZFA:0001288
James Malone
A malignant tumor that arises from hepatocytes. Hepatocellular carcinoma is relatively rare in the United States but very common in all African countries south of the Sahara and in Southeast Asia. Most cases are seen in patients over the age of 50 years, but this tumor can also occur in younger individuals and even in children. Hepatocellular carcinoma is more common in males than females and is associated with hepatitis B, hepatitis C, chronic alcohol abuse and cirrhosis. Serum elevation of alpha-fetoprotein occurs in a large percentage of patients with hepatocellular carcinoma. Grossly, hepatocellular carcinoma may present as a single mass, as multiple nodules, or as diffuse liver involvement. Microscopically, there is a wide range of differentiation from tumor to tumor (well differentiated to poorly differentiated tumors). Hepatocellular carcinomas quickly metastasize to regional lymph nodes and lung. The overall median survival of untreated liver cell carcinoma is about 4 months. The most effective treatment of hepatocellular carcinoma is complete resection of the tumor. Lately, an increasing number of tumors have been treated with liver transplantation.
Primary Carcinoma of Liver Cells[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
hepatocellular carcinoma
Carcinoma of Liver Cells
Liver Cell Cancer (Hepatocellular Carcinoma)[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
Primary Carcinoma of the Liver Cells
Liver Cell Carcinoma[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
Carcinoma of the Liver Cells[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
Liver Cell Cancer (Hepatocellular Carcinoma)
Carcinoma of the Liver Cells
Primary Carcinoma of Liver Cells
Liver Cell Carcinoma
hepatoma
HCC[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
Primary Carcinoma of the Liver Cells[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
Carcinoma of Liver Cells[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
A malignant tumor that arises from hepatocytes. Hepatocellular carcinoma is relatively rare in the United States but very common in all African countries south of the Sahara and in Southeast Asia. Most cases are seen in patients over the age of 50 years, but this tumor can also occur in younger individuals and even in children. Hepatocellular carcinoma is more common in males than females and is associated with hepatitis B, hepatitis C, chronic alcohol abuse and cirrhosis. Serum elevation of alpha-fetoprotein occurs in a large percentage of patients with hepatocellular carcinoma. Grossly, hepatocellular carcinoma may present as a single mass, as multiple nodules, or as diffuse liver involvement. Microscopically, there is a wide range of differentiation from tumor to tumor (well differentiated to poorly differentiated tumors). Hepatocellular carcinomas quickly metastasize to regional lymph nodes and lung. The overall median survival of untreated liver cell carcinoma is about 4 months. The most effective treatment of hepatocellular carcinoma is complete resection of the tumor. Lately, an increasing number of tumors have been treated with liver transplantation. --2002
NCIt:C3099
HCC
A malignant tumor that arises from hepatocytes. Hepatocellular carcinoma is relatively rare in the United States but very common in all African countries south of the Sahara and in Southeast Asia. Most cases are seen in patients over the age of 50 years, but this tumor can also occur in younger individuals and even in children. Hepatocellular carcinoma is more common in males than females and is associated with hepatitis B, hepatitis C, chronic alcohol abuse and cirrhosis. Serum elevation of alpha-fetoprotein occurs in a large percentage of patients with hepatocellular carcinoma. Grossly, hepatocellular carcinoma may present as a single mass, as multiple nodules, or as diffuse liver involvement. Microscopically, there is a wide range of differentiation from tumor to tumor (well differentiated to poorly differentiated tumors). Hepatocellular carcinomas quickly metastasize to regional lymph nodes and lung. The overall median survival of untreated liver cell carcinoma is about 4 months. The most effective treatment of hepatocellular carcinoma is complete resection of the tumor. Lately, an increasing number of tumors have been treated with liver transplantation.[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
Hepatoma[accessedResource: NCIt:C3099][accessDate: 04-11-2010]
InChIKey=BJQHLKABXJIVAM-UHFFFAOYAB
Phthalic acid bis(2-ethylhexyl) ester
CHEBI:17747
DEHP
Bis(2-ethylhexyl) o-phthalate
C24H38O4
http://www.ebi.ac.uk/efo/EFO_0001521
InChI=1/C24H38O4/c1-5-9-13-19(7-3)17-27-23(25)21-15-11-12-16-22(21)24(26)28-18-20(8-4)14-10-6-2/h11-12,15-16,19-20H,5-10,13-14,17-18H2,1-4H3
Di-sec-octyl phthalate
di-iso-Octyl phthalate
diethylhexyl phthalate
A phthalate ester that has formula C24H38O4.
Bis(ethylhexyl) phthalate
CCCCC(CC)COC(=O)c1ccccc1C(=O)OCC(CC)CCCC
The bis(2-ethylhexyl) ester of 1,2-benzenedicarboxylic acid.
2-Ethylhexyl phthalate
Di(2-ethylhexyl) o-phthalate
Di(2-ethylhexyl)phthalate
Dioctyl phthalate
bis(2-ethylhexyl) 1,2-benzenedicarboxylate
Bis(2-ethylhexyl)phthalate
Phthalic acid di(2-ethylhexyl) ester
Di(2-ethylhexyl)orthophthalate
Octyl phthalate
1,2-Benzenedicarboxylic acid bis(2-ethylhexyl) ester
Ele Holloway
James Malone
SH-SY5Y
CRL-2266
James Malone
pharyngula high-pec
ZFS:0000032
Jie Zheng
growth condition
Tomasz Adamusiak
A role that a material entity can play which enables particular conditions used to grow organisms or parts of the organism. This includes isolated environments such as cultures and open environments such as field studies.
GrowthCondition[accessedResource: MO_183][accessDate: 04-11-2010]
MO_183
GrowthCondition
James Malone
MAT:0000223
GRO:0005597[accessedResource: BTO:0000170][accessDate: 04-11-2010]
cambium
A thin formative layer between the xylem and phloem of most vascular plants that gives rise to new cells and is responsible for secondary growth;nA lateral meristem in vascular plants, including the vascular cambium and cork cambium, that forms parallel rows of cells resulting in secondary tissues.
BTO:0000170
James Malone
The layer of active cells between xylem and phloem that gives rise to secondary tissues (e.g. bark)[accessedResource: MAT:0000223][accessDate: 04-11-2010]
The layer of active cells between xylem and phloem that gives rise to secondary tissues (e.g. bark)
A thin formative layer between the xylem and phloem of most vascular plants that gives rise to new cells and is responsible for secondary growth;nA lateral meristem in vascular plants, including the vascular cambium and cork cambium, that forms parallel rows of cells resulting in secondary tissues.[accessedResource: BTO:0000170][accessDate: 04-11-2010]
GRO:0005597
PO:0005597
Gehrig Disease[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:11996514
Lou Gehrig's disease[accessedResource: DOID:332][accessDate: 04-11-2010]
Motor Neuron Disease, Amyotrophic Lateral Sclerosis
GEHRIGS DIS
GeneRIF:15388334
Motor neuron disease, bulbar
Amyotrophic lateral sclerosis (disorder)[accessedResource: SNOMEDCT:86044005][accessDate: 04-11-2010]
GeneRIF:12707786
GeneRIF:12125045
MOTOR NEURON DIS AMYOTROPHIC LATERAL SCLEROSIS
Gehrigs Disease[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:12847526
GeneRIF:14734542
LOU GEHRIGS DIS
ALS
GeneRIF:15033789
GeneRIF:11854284
GeneRIF:15546588
Lou Gehrig's Disease
GeneRIF:12442272
GeneRIF:14506936
Lateral Scleroses, Amyotrophic[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:12972170
GeneRIF:14985749
GeneRIF:12235108
GeneRIF:15837590
GeneRIF:15313203
GeneRIF:12217886
Amyotrophic Lateral Sclerosis With Dementia[accessedResource: MSH:D000690][accessDate: 04-11-2010]
ICD9:335.20
GeneRIF:15776280
GeneRIF:12866199
amyotrophic lateral sclerosis
GeneRIF:12875980
GeneRIF:15652414
GeneRIF:15326253
GeneRIF:11854285
A degenerative disorder affecting upper MOTOR NEURONS in the brain and lower motor neurons in the brain stem and SPINAL CORD. Disease onset is usually after the age of 50 and the process is usually fatal within 3 to 6 years. Clinical manifestations include progressive weakness, atrophy, FASCICULATION, hyperreflexia, DYSARTHRIA, dysphagia, and eventual paralysis of respiratory function. Pathologic features include the replacement of motor neurons with fibrous ASTROCYTES and atrophy of anterior SPINAL NERVE ROOTS and corticospinal tracts (MeSH).
GeneRIF:15109247
GeneRIF:12528821
SNOMEDCT:86044005
GeneRIF:12677446
GeneRIF:12458194
GeneRIF:12270696
Lou Gehrig Disease
GeneRIF:12641746
GeneRIF:15019581
GeneRIF:14676054
GeneRIF:15475574
GeneRIF:15465081
GeneRIF:12153483
AMYOTROPHIC SCLEROSIS
GeneRIF:11943600
GeneRIF:11675877
GeneRIF:14978393
GeneRIF:12480087
GeneRIF:12138710
GeneRIF:15233913
GeneRIF:12448348
MOTOR NEURON DIS AMYOTROPHIC LATERAL SCLEROSIS[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:12441104
Amyotrophic Lateral Sclerosis, Guam Form[accessedResource: MSH:D000690][accessDate: 04-11-2010]
A degenerative disorder affecting upper MOTOR NEURONS in the brain and lower motor neurons in the brain stem and SPINAL CORD. Disease onset is usually after the age of 50 and the process is usually fatal within 3 to 6 years. Clinical manifestations include progressive weakness, atrophy, FASCICULATION, hyperreflexia, DYSARTHRIA, dysphagia, and eventual paralysis of respiratory function. Pathologic features include the replacement of motor neurons with fibrous ASTROCYTES and atrophy of anterior SPINAL NERVE ROOTS and corticospinal tracts. (From Adams et al., Principles of Neurology, 6th ed, pp1089-94)[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:15691826
Gehrig Disease
GeneRIF:15557516
GeneRIF:12502789
GeneRIF:15568021
AMYOTROPHIC SCLEROSIS[accessedResource: ICD9:335.20][accessDate: 04-11-2010]
GeneRIF:14511332
Tomasz Adamusiak
Lou Gehrigs Disease
GeneRIF:15350647
GeneRIF:15264227
GeneRIF:15509539
GeneRIF:14970233
GeneRIF:15006704
GeneRIF:15076751
GeneRIF:12694394
GeneRIF:11991808
ALS[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:16020530
GeneRIF:15106121
GeneRIF:12230304
Gehrig's Disease
Guam Form of Amyotrophic Lateral Sclerosis[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:12584731
An autosomal dominant inherited form of amyloidosis.
GeneRIF:12446576
GeneRIF:15330338
DOID:332
Lou Gehrig Disease[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:12614934
Motor Neuron Disease, Amyotrophic Lateral Sclerosis[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:12659845
GeneRIF:15672551
GeneRIF:12437574
LOU GEHRIG DIS[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:15829169
GeneRIF:14596848
NCIt:C34373
GeneRIF:12039658
Lateral Scleroses, Amyotrophic
GeneRIF:12393885
GEHRIGS DIS[accessedResource: MSH:D000690][accessDate: 04-11-2010]
An autosomal dominant inherited form of amyloidosis.[accessedResource: NCIt:C34373][accessDate: 04-11-2010]
GeneRIF:12843244
A degenerative disorder affecting upper MOTOR NEURONS in the brain and lower motor neurons in the brain stem and SPINAL CORD. Disease onset is usually after the age of 50 and the process is usually fatal within 3 to 6 years. Clinical manifestations include progressive weakness, atrophy, FASCICULATION, hyperreflexia, DYSARTHRIA, dysphagia, and eventual paralysis of respiratory function. Pathologic features include the replacement of motor neurons with fibrous ASTROCYTES and atrophy of anterior SPINAL NERVE ROOTS and corticospinal tracts (MeSH).[accessedResource: NIFSTD:birnlex_12566][accessDate: 04-11-2010]
GeneRIF:15789135
GeneRIF:15184633
NIFSTD:birnlex_12566
GeneRIF:15030390
GeneRIF:15069187
GeneRIF:15657798
GeneRIF:14675609
GeneRIF:11860274
ALS (Amyotrophic Lateral Sclerosis)
ALS (Amyotrophic Lateral Sclerosis)[accessedResource: MSH:D000690][accessDate: 04-11-2010]
GeneRIF:12679596
GeneRIF:15126567
GeneRIF:12730211
GeneRIF:14642651
GeneRIF:16114275
GeneRIF:15094483
Guam Form of Amyotrophic Lateral Sclerosis
GeneRIF:13129803
GeneRIF:14989597
GeneRIF:12210393
GeneRIF:13678668
GeneRIF:12475980
Amyotrophic Lateral Sclerosis With Dementia
GeneRIF:15037546
Lou Gehrigs Disease[accessedResource: NIFSTD:birnlex_12566][accessDate: 04-11-2010]
GeneRIF:15048885
A degenerative disorder affecting upper MOTOR NEURONS in the brain and lower motor neurons in the brain stem and SPINAL CORD. Disease onset is usually after the age of 50 and the process is usually fatal within 3 to 6 years. Clinical manifestations include progressive weakness, atrophy, FASCICULATION, hyperreflexia, DYSARTHRIA, dysphagia, and eventual paralysis of respiratory function. Pathologic features include the replacement of motor neurons with fibrous ASTROCYTES and atrophy of anterior SPINAL NERVE ROOTS and corticospinal tracts. (From Adams et al., Principles of Neurology, 6th ed, pp1089-94)
GeneRIF:11951178
Bulbar motor neuron disease[accessedResource: SNOMEDCT:86044005][accessDate: 04-11-2010]
GeneRIF:12770687
LOU GEHRIG DIS
GeneRIF:16005901
James Malone
GeneRIF:12915461
GeneRIF:12127151
GeneRIF:14991384
GeneRIF:14597108
GeneRIF:12644909
GeneRIF:15753080
GeneRIF:15657392
GeneRIF:12783432
GeneRIF:12870272
GeneRIF:15623718
GeneRIF:15488469
Amyotrophic Lateral Sclerosis, Guam Form
Amyotrophic lateral sclerosis (disorder)
GeneRIF:15978558
MSH:D000690
GeneRIF:15634772
GeneRIF:15910777
LOU GEHRIGS DIS[accessedResource: MSH:D000690][accessDate: 04-11-2010]
true
obsolete_CTL sensitivity
true
microgram per kilogram
ug/kg
Tomasz Adamusiak
latissimus dorsi
FMAID:13357
James Malone
topoisomerase-II inhibitors
CHEBI:50750
An inhibitor of DNA topoisomerase II, which catalyses ATP-dependent breakage of both strands of DNA, passage of the unbroken strands through the breaks, and rejoining of the broken strands.
inhibitor of type II topoisomerase
topoisomerase II inhibitor
inhibitors of type II topoisomerase
http://www.ebi.ac.uk/efo/EFO_0001896
James Malone
CS57664 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158688&type=germplasm
CS57664
http://www.arabidopsis.org/servlets/TairObject?id=1005158688&type=germplasm
OntologyMappingImporter following MAT:0000218
spermatozoon[accessedResource: CL:0000019][accessDate: 04-11-2010]
plant sperm
spermatozoid
A mature male germ cell that develops from a spermatid.
CL:0000019
PO:0000084
spermatozoon
A mature male germ cell that develops from a spermatid.[accessedResource: CL:0000019][accessDate: 04-11-2010]
sperm cell[accessedResource: MAT:0000218][accessDate: 04-11-2010]
sperm[accessedResource: MAT:0000218][accessDate: 04-11-2010]
spermatozoid[accessedResource: CL:0000019][accessDate: 04-11-2010]
James Malone
sperm
MAT:0000218
sperm cell
Tomasz Adamusiak
Tomasz Adamusiak
rectum primordium
FBbt:00005506
Thymus medulla[accessedResource: FMA:72206][accessDate: 04-11-2010]
James Malone
medulla of thymus
FMA:72206
Thymus medulla
Either of a pair of masses of nervous tissue within the brain that contain two large nuclei of gray matter separated by sheets of white matter.
Striped gray and white matter consisting of the neostriatum and paleostriatum (globus pallidus). It is located in front of and lateral to the thalamus in each cerebral hemisphere. The gray substance is made up of the caudate nucleus and the lentiform nucleus. The white matter is the internal capsule. (MeSH)
Tomasz Adamusiak
corpus striatum
NCIt:C12448
dorsal striatum
Either of a pair of masses of nervous tissue within the brain that contain two large nuclei of gray matter separated by sheets of white matter.[accessedResource: BTO:0001311][accessDate: 04-11-2010]
BTO:0001311
striatum
NIFSTD:nlx_anat_20090201
Striatum[accessedResource: NCIt:C12448][accessDate: 04-11-2010]
James Malone
Neostriatum
Striate Body
Striped gray and white matter consisting of the neostriatum and paleostriatum (globus pallidus). It is located in front of and lateral to the thalamus in each cerebral hemisphere. The gray substance is made up of the caudate nucleus and the lentiform nucleus. The white matter is the internal capsule. (MeSH)[accessedResource: NCIt:C12448][accessDate: 04-11-2010]
Striate Body[accessedResource: NCIt:C12448][accessDate: 04-11-2010]
NIFSTD:birnlex_1672
Neostriatum[accessedResource: NIFSTD:birnlex_1672][accessDate: 04-11-2010]
dead
post-mortem
http://www.ebi.ac.uk/efo/EFO_0001636
Vitamin D is a group of fat-soluble prohormones, which can be obtained from sun exposure, food and supplements. Vitamin D is biologically inactive and converted to the biologically active calcicitriol via double hydroxilation in the body.
Vitamin D3
CHEBI:27300
vitamin D
Not needed.
true
The recorded value of the outcome of some test.
obsolete_test result
James Malone
http://www.ebi.ac.uk/efo/EFO_0002008
polyamide
CHEBI:51953
Tomasz Adamusiak
ventral hyoid arch
ZFA:0001402
Tomasz Adamusiak
dorsal telencephalon
ZFA:0000505
A distinctly differentiated long-lived T cell that has the phenotype CD45RO-positive and CD127-positive.[accessedResource: CL:0000813][accessDate: 04-11-2010]
BTO:0003435
CL:0000813
A distinctly differentiated long-lived T cell that has the phenotype CD45RO-positive and CD127-positive.
Tomasz Adamusiak
memory T-lymphocyte[accessedResource: CL:0000813][accessDate: 04-11-2010]
memory T-cell
memory T-lymphocyte
A T-cell that bears receptors for a specific foreign antigen encountered during a prior infection or vaccination. After an infection or a vaccination, some of the T-cells that participated in the response remain as memory T-cells, which can rapidly mobilize and clone themselves should the same antigen be re-encountered during a second infection at a later time.
A T-cell that bears receptors for a specific foreign antigen encountered during a prior infection or vaccination. After an infection or a vaccination, some of the T-cells that participated in the response remain as memory T-cells, which can rapidly mobilize and clone themselves should the same antigen be re-encountered during a second infection at a later time.[accessedResource: BTO:0003435][accessDate: 04-11-2010]
James Malone
Hibiscus chlorotic ringspot virus
NCI Metathesaurus: C1017212
obsolete_strain
MO_859
A population or type of organisms that is geneticaly different from others of the same species and possessing a set of defined characteristics.
line
James Malone
true
this class was originally 'strain or line'
Tomasz Adamusiak
consolodated into organism hierarchy
Jie Zheng
1.8
miconazole
1-[2-(2,4-dichlorophenyl)-2-{[(2,4-dichlorophenyl)methyl]oxy}ethyl]-1H-imidazole
22916-47-8
23319
C18H14Cl4N2O
polycystic lipomembranous osteodysplasia with sclerosing leukoencephalopathy
NHD
Tomasz Adamusiak
PLOSL
Nasu-Hakola disease
OMIMID:221770
Presenile dementia with bone cyst
cytochalasin D
22144-77-0
CHEBI:35221
James Malone
http://www.ebi.ac.uk/efo/EFO_0001834
Substance, structurally similar to a metabolite, which competes with it or replaces it, and so prevents or reduces its normal utilization.
antimetabolite
antimetabolites
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.
true
CL:0000236
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.
Bursa-Equivalent Lymphocyte[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B lymphocyte[accessedResource: CL:0000236][accessDate: 10-05-2010]
obsolete_B-lymphocyte
Bursa-Equivalent Lymphocyte
NCIt:C12474
B Cells
B Cells[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B Lymphocytes
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.[accessedResource: CL:0000236][accessDate: 10-05-2010]
B-Lymphocytes[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B-Cell
Consolidated with B cell (EFO_0000101), use B cell class instead.
Bursa-Dependent Lymphocytes
Bursa-Dependent Lymphocytes[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
Immunologically important lymphocyte that is not thymus-dependent, is either short-lived and naive or long-lived and of memory phenotype, and resembles the bursa-derived lymphocyte of birds in that it is responsible for the production of immunoglobulins.[accessedResource: NCIt:C12474][accessDate: 10-05-2010]
B cell[accessedResource: CL:0000236][accessDate: 10-05-2010]
B lymphocyte
CHEBI:50144
InChIKey=DAEPDZWVDSPTHF-UFJSCRFPCI
An organic sodium salt that has formula C3H3NaO3.
sodium 2-oxopropanoate
InChI=1/C3H4O3.Na/c1-2(4)3(5)6;/h1H3,(H,5,6);/q;+1/p-1/fC3H3O3.Na/q-1;m
Natriumpyruvat
C3H3NaO3
pyruvic acid, sodium salt
[Na+].CC(=O)C([O-])=O
sodium pyruvate
http://www.ebi.ac.uk/efo/EFO_0001612
James Malone
Tomasz Adamusiak
A/J is a mouse strain as described in Jackson Laboratory http://jaxmice.jax.org/strain/000646.html
A/J
NIFSTD:birnlex_577
http://jaxmice.jax.org/strain/000646.html
reproductive system cell
Ele Holloway
James Malone
YCC16
Ele Holloway
James Malone
SW48
Abdomen
NCIt:C12664
The portion of the body that lies between the thorax and the pelvis.
James Malone
The portion of the body that lies between the thorax and the pelvis.[accessedResource: NCIt:C12664][accessDate: 04-11-2010]
Abdomen[accessedResource: NCIt:C12664][accessDate: 04-11-2010]
abdominal cavity
Ele Holloway
James Malone
EB2
Tomasz Adamusiak
ring gland primordium
FBbt:00017009
James Malone
cleavage 2-cell
ZFS:0000002
Tomasz Adamusiak
regenerating fin
ZFA:0001269
A cell of an organism that does not pass on its genetic material to the organism's offspring (i.e. a non-germ line cell).[accessedResource: CL:0002371][accessDate: 04-11-2010]
Somatic Cells[accessedResource: NCIt:C12949][accessDate: 04-11-2010]
One of the cells of the body that compose the tissues, organs, and parts of that individual other than the germ cells.[accessedResource: BTO:0001268][accessDate: 04-11-2010]
Tomasz Adamusiak
One of the cells of the body that compose the tissues, organs, and parts of that individual other than the germ cells.
Somatic Cells
somatic cell
NCIt:C12949
A cell of an organism that does not pass on its genetic material to the organism's offspring (i.e. a non-germ line cell).
BTO:0001268
James Malone
CL:0002371
James Malone
well-differentiated sarcoma
acyclovir
59277-89-3
aciclovir
unfertiized egg[accessedResource: MAT:0000124][accessDate: 04-11-2010]
cornua[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
ZFA:0009008
The lateral expansion of the posterior part of the cibarium.
TGMA:0000124
unfertiized egg
chitinous wing[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
oocyte[accessedResource: ZFA:0009008][accessDate: 04-11-2010]
CL:0000023
fulcral cornu[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
cornu[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
The lateral expansion of the posterior part of the cibarium.[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
Fulcrum
oocyte
FBbt:00015288
ventrale Fulcralapophyse[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
A female germ cell that has entered meiosis.
egg[accessedResource: ZFA:0009008][accessDate: 04-11-2010]
Fulcrum[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
SAEL:114
Tomasz Adamusiak
egg
dorsale Fulcralapophyse
ventral flange[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
female gamete
James Malone
unfertilized egg
MA:0000388
lateral flange[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
MAT:0000124
fulcral cornu
dorsale Fulcralapophyse[accessedResource: TGMA:0000124][accessDate: 04-11-2010]
unfertilised egg
lateral flange
chitinous wing
A female germ cell that has entered meiosis.[accessedResource: CL:0000023][accessDate: 04-11-2010]
ventral flange
ventrale Fulcralapophyse
female gamete[accessedResource: MAT:0000124][accessDate: 04-11-2010]
cornua
cornu
InChIKey=MZNYWPRCVDMOJG-PEHGYZQZCO
N-(1-naphthyl)ethylenediamine dihydrochloride
Ele Holloway
An ethylenediamine dihydrochloride compound having an N-(1-naphthyl) substituent.
N-(1-naphthyl)ethane-1,2-diaminium dichloride
N-(1-Napthyl)ethylene diamine HCl
[Cl-].[Cl-].[NH3+]CC[NH2+]c1cccc2ccccc12
Marshall's reagent
InChI=1/C12H14N2.2ClH/c13-8-9-14-12-7-3-5-10-4-1-2-6-11(10)12;;/h1-7,14H,8-9,13H2;2*1H/fC12H16N2.2Cl/h13-14H;2*1h/q+2;2*-1
CHEBI:53452
http://www.ebi.ac.uk/efo/EFO_0002736
C12H16Cl2N2
N-(1-Naphthyl)ethylenediamine.2HCl
N-1-Naphthalenyl-1,2-ethanediamine dihydrochloride
Tomasz Adamusiak
N-(1-Napthyl)ethylene diamine dihydrochloride
An elongated gray mass of the neostriatum located adjacent to the lateral ventricle of the brain. (MeSH)
NIFSTD:birnlex_1373
Caudatus[accessedResource: FMAID:61833][accessDate: 04-11-2010]
FMAID:61833
MA:0000893
NCIt:C12451
caudate nucleus
Caudatus
One of the centrally-located portions of the brain affected by Huntington's Disease. Speech and swallowing problems arise when this region and another region called the putamen are affected.[accessedResource: BTO:0000211][accessDate: 04-11-2010]
EV:0100185
Nucleus Caudatus
EMAPA:18207
Nucleus Caudatus[accessedResource: NCIt:C12451][accessDate: 04-11-2010]
James Malone
One of the centrally-located portions of the brain affected by Huntington's Disease. Speech and swallowing problems arise when this region and another region called the putamen are affected.
An elongated gray mass of the neostriatum located adjacent to the lateral ventricle of the brain. (MeSH)[accessedResource: NCIt:C12451][accessDate: 04-11-2010]
Tomasz Adamusiak
Nucleus of brain which is an elongated crescent-shaped mass lying parallel and adjacent to the lateral ventricle throughout its extent.
MAT:0000513
BTO:0000211
metilprednisolona
InChI=1/C22H30O5/c1-12-8-14-15-5-7-22(27,18(26)11-23)21(15,3)10-17(25)19(14)20(2)6-4-13(24)9-16(12)20/h4,6,9,12,14-15,17,19,23,25,27H,5,7-8,10-11H2,1-3H3/t12-,14-,15-,17-,19+,20-,21-,22-/m0/s1
methylprednisolone
Medrol
(6alpha,11beta)-11,17,21-trihydroxy-6-methylpregna-1,4-diene-3,20-dione
InChIKey=VHRSUDSXCMQTMA-PJHHCJLFBP
Solomet
6alpha-methylprednisolone
James Malone
Medrate
6alpha-methyl-11beta,17alpha,21-triol-1,4-pregnadiene-3,20-dione
Methylprednisolon
methylprednisolonum
http://www.ebi.ac.uk/efo/EFO_0001475
A 6-methylprednisolone that has formula C22H30O5.
1-dehydro-6alpha-methylhydrocortisone
[H][C@@]12C[C@H](C)C3=CC(=O)C=C[C@]3(C)[C@@]1([H])[C@@H](O)C[C@@]1(C)[C@@]2([H])CC[C@]1(O)C(=O)CO
C22H30O5
CHEBI:6888
11beta,17,21-trihydroxy-6alpha-methylpregna-1,4-diene-3,20-dione
Medrone
Delta(1)-6alpha-methylhydrocortisone
Urbason
James Malone
CS57816 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158840&type=germplasm
CS57816
http://www.arabidopsis.org/servlets/TairObject?id=1005158840&type=germplasm
Tomasz Adamusiak
zebrafish embryonic structure
cytarabine
147-94-4
22877
2877
4-amino-1-beta-D-arabinofuranosylpyrimidin-2(1H)-one
C9H13N3O5
cytosine arabinoside; Ara-C
James Malone
joint component
pimozide
1-{1-[4,4-bis(4-fluorophenyl)butyl]piperidin-4-yl}-1,3-dihydro-2H-benzimidazol-2-one
2062-78-4
23474
C28H29F2N3O
Jie Zheng
Tomasz Adamusiak
genetic modification
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#genetic_modification[accessedResource: MO_927][accessDate: 04-11-2010]
The genetic modification introduced into the organism from which the biomaterial was derived. Examples of genetic modification include specification of a transgene or the gene knocked-out or details of transient transfection.
Examples of genetic modification include specification of a transgene or the gene knocked-out or details of transient transfection
MO_927
true
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#genetic_modification
Tomasz Adamusiak
presumptive telencephalon
ZFA:0000571
James Malone
CS57901 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158925&type=germplasm
CS57901
http://www.arabidopsis.org/servlets/TairObject?id=1005158925&type=germplasm
kidney[accessedResource: TAO:0000151][accessDate: 04-11-2010]
EV:3000635
embryonic kidney
MAT:0000117
The first kidney is all vertebrates - it is transitional and disappears soon after it has formed.[accessedResource: MAT:0000117][accessDate: 04-11-2010]
ZFA:0000151
1. The primordial kidney; a vestigial excretory structure or its rudiments developing in the embryo at four weeks, before the mesonephros. Although nonfunctional, its duct is later used by the mesonephros, which arises caudal to it.n2. The definitive excretory organ of primitive fishes.[accessedResource: BTO:0001541][accessDate: 04-11-2010]
1. The primordial kidney; a vestigial excretory structure or its rudiments developing in the embryo at four weeks, before the mesonephros. Although nonfunctional, its duct is later used by the mesonephros, which arises caudal to it.n2. The definitive excretory organ of primitive fishes.
MFO:0003340
The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.Kimmel et al, 1995.
TAO:0000151
The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.Kimmel et al, 1995.[accessedResource: TAO:0000151][accessDate: 04-11-2010]
embryonic kidney[accessedResource: TAO:0000151][accessDate: 04-11-2010]
pronephros
EHDAA:1017
The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.[accessedResource: ZFA:0000151][accessDate: 04-11-2010]
pronephron
pronephric nephron
EMAPA:16579
The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.
archinephron[accessedResource: BTO:0001541][accessDate: 04-11-2010]
The first kidney is all vertebrates - it is transitional and disappears soon after it has formed.
kidney
BTO:0001541
archinephron
head kidney
James Malone
pronephric nephron[accessedResource: ZFA:0000151][accessDate: 04-11-2010]
head kidney[accessedResource: BTO:0001541][accessDate: 04-11-2010]
pronephron[accessedResource: BTO:0001541][accessDate: 04-11-2010]
XAO:0002000
Basal Cell Adenomas[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Adenomas, Monomorphic[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Adenomas, Microcystic
MSH:D000236
A benign epithelial tumor with a glandular organization.[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Adenomas, Monomorphic
SNOMEDCT:255034006
Follicular adenoma (morphologic abnormality)[accessedResource: SNOMEDCT:55021007][accessDate: 04-11-2010]
A benign epithelial tumor with a glandular organization.
Monomorphic Adenoma[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Thyroid Gland Follicular Adenoma
Adenoma, Microcystic[accessedResource: MSH:D000236][accessDate: 04-11-2010]
follicular thyroid adenoma
Papillary Adenomas
Follicular Adenoma of Thyroid Gland
Follicular Adenoma of the Thyroid
Trabecular Adenomas[accessedResource: MSH:D000236][accessDate: 04-11-2010]
SNOMEDCT:55021007
Follicular Adenomas
Papillary Adenoma[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Adenomas[accessedResource: MSH:D000236][accessDate: 04-11-2010]
GeneRIF:14576819
Microcystic Adenoma
Adenomas, Trabecular
Basal Cell Adenoma
Follicular adenoma[accessedResource: SNOMEDCT:55021007][accessDate: 04-11-2010]
Adenoma[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Thyroid follicular adenoma (disorder)[accessedResource: SNOMEDCT:255034006][accessDate: 04-11-2010]
James Malone
Follicular Adenomas[accessedResource: MSH:D000236][accessDate: 04-11-2010]
GeneRIF:14666683
Follicular Adenoma of Thyroid
Adenomas
DOID:6204
Follicular Adenoma of the Thyroid Gland
Adenoma, Trabecular
Monomorphic Adenoma
Adenoma, Basal Cell[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Follicular adenoma (morphologic abnormality)
Follicular Adenoma of the Thyroid Gland[accessedResource: NCIt:C3684][accessDate: 04-11-2010]
GeneRIF:11994357
GeneRIF:15887854
Thyroid Gland Follicular Adenoma[accessedResource: NCIt:C3684][accessDate: 04-11-2010]
follicular adenoma
Follicular Adenoma of the Thyroid[accessedResource: NCIt:C3684][accessDate: 04-11-2010]
Adenoma, Papillary
Papillary Adenomas[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Thyroid follicular adenoma (disorder)
Trabecular Adenoma[accessedResource: MSH:D000236][accessDate: 04-11-2010]
Adenomas, Microcystic[accessedResource: MSH:D000236][accessDate: 04-11-2010]
NCIt:C3684
Follicular Adenoma of Thyroid Gland[accessedResource: NCIt:C3684][accessDate: 04-11-2010]
Adenoma
Adenomas, Basal Cell
Follicular Adenoma of Thyroid[accessedResource: NCIt:C3684][accessDate: 04-11-2010]
GeneRIF:12770674
RTS - Rett syndrome[accessedResource: SNOMEDCT:68618008][accessDate: 04-11-2010]
GeneRIF:12707946
GeneRIF:11896459
Tomasz Adamusiak
GeneRIF:14974082
GeneRIF:11768391
An inherited neurological developmental disorder that is associated with X-LINKED INHERITANCE and may be lethal in utero to hemizygous males. The affected female is normal until the age of 6-25 months when progressive loss of voluntary control of hand movements and communication skills; ATAXIA; SEIZURES; autistic behavior; intermittent HYPERVENTILATION; and HYPERAMMONEMIA appear (MeSH).
RTS - Rett syndrome
GeneRIF:16077729
DOID:1206
Rett syndrome
GeneRIF:15057977
GeneRIF:14649549
An inherited neurological developmental disorder that is associated with X-LINKED INHERITANCE and may be lethal in utero to hemizygous males. The affected female is normal until the age of 6-25 months when progressive loss of voluntary control of hand movements and communication skills; ATAXIA; SEIZURES; autistic behavior; intermittent HYPERVENTILATION; and HYPERAMMONEMIA appear. (From Menkes, Textbook of Child Neurology, 5th ed, p199)[accessedResource: MSH:D015518][accessDate: 04-11-2010]
SNOMEDCT:68618008
An inherited neurological developmental disorder that is associated with X-LINKED INHERITANCE and may be lethal in utero to hemizygous males. The affected female is normal until the age of 6-25 months when progressive loss of voluntary control of hand movements and communication skills; ATAXIA; SEIZURES; autistic behavior; intermittent HYPERVENTILATION; and HYPERAMMONEMIA appear (MeSH).[accessedResource: NIFSTD:birnlex_12770][accessDate: 04-11-2010]
RETT DIS[accessedResource: MSH:D015518][accessDate: 04-11-2010]
Cerebroatrophic Hyperammonemias
Rett's Syndrome
GeneRIF:14751287
RETTS DIS[accessedResource: MSH:D015518][accessDate: 04-11-2010]
GeneRIF:12442230
Autism-Dementia-Ataxia-Loss of Purposeful Hand Use Syndrome
Cerebroatrophic Hyperammonemia[accessedResource: MSH:D015518][accessDate: 04-11-2010]
GeneRIF:16015284
RETTS DIS
RETT DIS
Rett's disorder (disorder)[accessedResource: DOID:1206][accessDate: 04-11-2010]
GeneRIF:16077736
Rett's disorder
GeneRIF:12111643
GeneRIF:11955928
Rett's Syndrome[accessedResource: MSH:D015518][accessDate: 04-11-2010]
GeneRIF:12081725
Autism-Dementia-Ataxia-Loss of Purposeful Hand Use Syndrome[accessedResource: NIFSTD:birnlex_12770][accessDate: 04-11-2010]
NIFSTD:birnlex_12770
MSH:D015518
Cerebroatrophic hyperammonaemia[accessedResource: SNOMEDCT:68618008][accessDate: 04-11-2010]
James Malone
Cerebroatrophic Hyperammonemias[accessedResource: MSH:D015518][accessDate: 04-11-2010]
Rett disorder
A pervasive developmental disorder that is a neurological and developmental disorder that mostly occurs in females and is caused_by a mutation on the MECP2 gene on the X chromosome. Infants with Rett syndrome seem to grow and develop normally at first, but then stop developing and even lose skills and abilities.[accessedResource: DOID:1206][accessDate: 04-11-2010]
Rett Disorder[accessedResource: MSH:D015518][accessDate: 04-11-2010]
GeneRIF:12160743
GeneRIF:12449561
GeneRIF:15809268
Cerebroatrophic hyperammonaemia
GeneRIF:12107440
GeneRIF:11432961
GeneRIF:12170461
An inherited neurological developmental disorder that is associated with X-LINKED INHERITANCE and may be lethal in utero to hemizygous males. The affected female is normal until the age of 6-25 months when progressive loss of voluntary control of hand movements and communication skills; ATAXIA; SEIZURES; autistic behavior; intermittent HYPERVENTILATION; and HYPERAMMONEMIA appear. (From Menkes, Textbook of Child Neurology, 5th ed, p199)
GeneRIF:15954098
Rett's Disorder[accessedResource: MSH:D015518][accessDate: 04-11-2010]
Cerebroatrophic Hyperammonemia
A pervasive developmental disorder that is a neurological and developmental disorder that mostly occurs in females and is caused_by a mutation on the MECP2 gene on the X chromosome. Infants with Rett syndrome seem to grow and develop normally at first, but then stop developing and even lose skills and abilities.
Rett's disorder (disorder)
A picomole is a substance unit equal to 10^-12 mol.
A substance unit equal to 10^[-12] mol.
http://www.ebi.ac.uk/efo/EFO_0001798
MO_688
true
Tomasz Adamusiak
James Malone
pmol
picomole
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pmol
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#pmol[accessedResource: MO_688][accessDate: 04-11-2010]
EHDAA:3472
Tomasz Adamusiak
diencephalon
Mature diencephalon[accessedResource: FMAID:62001][accessDate: 04-11-2010]
NIFSTD:birnlex_1503
Mature diencephalon
FMAID:62001
The posterior subdivision of the forebrain.
TAO:0000101
James Malone
The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis).
BTO:0000342
The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis).[accessedResource: ZFA:0000101][accessDate: 04-11-2010]
betweenbrain
Organ component of neuraxis that has as its parts the epithalamus, thalamus, hypothalamus, subthalamus. There is only one diencephalon.
interbrain
The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis). Kimmel et al, 1995.
Interbrain[accessedResource: FMAID:62001][accessDate: 04-11-2010]
The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis). Kimmel et al, 1995.[accessedResource: TAO:0000101][accessDate: 04-11-2010]
The posterior subdivision of the forebrain.[accessedResource: BTO:0000342][accessDate: 04-11-2010]
ZFA:0000101
EMAPA:16896
MFO:0002280
XAO:0000013
Between brain[accessedResource: FMAID:62001][accessDate: 04-11-2010]
MA:0000171
MAT:0000420
organism
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#organism[accessedResource: MO_508][accessDate: 04-11-2010]
Jie Zheng
MO_508
NIFSTD:birnlex_376
http://www.ebi.ac.uk/efo/EFO_0000634
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#organism
A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs.
James Malone
A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs. E.g Drosophila melanogaster
true
Drosophila melanogaster
LF - Low fat diet[accessedResource: SNOMEDCT:16208003][accessDate: 04-11-2010]
LF - Low fat diet
Low fat diet, NOS[accessedResource: SNOMEDCT:16208003][accessDate: 04-11-2010]
Jie Zheng
Low fat diet (finding)
Diet - low in fat[accessedResource: SNOMEDCT:16208003][accessDate: 04-11-2010]
Low fat diet, NOS
Diet - low in fat
SNOMEDCT:16208003
low fat diet
Tomasz Adamusiak
Low fat diet (finding)[accessedResource: SNOMEDCT:16208003][accessDate: 04-11-2010]
LFD - Low fat diet
LFD - Low fat diet[accessedResource: SNOMEDCT:16208003][accessDate: 04-11-2010]
James Malone
blastula high
ZFS:0000012
true
2.6.1
Use http://www.ebi.ac.uk/efo/EFO_0000365 colorectal adenocarcinoma
obsolete_rectal carcinoma
Alveolus[accessedResource: FMA:82493][accessDate: 04-11-2010]
James Malone
pulmonary alveolus
FMA:82493
Alveolus
Bronchial Alveolus
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hardware_variation_design[accessedResource: MO_734][accessDate: 04-11-2010]
Tomasz Adamusiak
hardware variation design
MO_734
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#hardware_variation_design
tendon cell[accessedResource: MAT:0000301][accessDate: 04-11-2010]
EV:0100150
tendon[accessedResource: MAT:0000301][accessDate: 04-11-2010]
tendon
XAO:0000173
muscle attachment cell[accessedResource: CL:0000388][accessDate: 04-11-2010]
James Malone
connective tissue
CL:0000388
FMAID:9640
fascia
TAO:0009189
SAEL:23
Portion of connective tissue[accessedResource: FMAID:9640][accessDate: 04-11-2010]
fascia[accessedResource: MAT:0000301][accessDate: 04-11-2010]
The tissue which binds together and is the support of the various structures of the body. It is made up of fibroblasts, fibroglia, collagen fibrils, and elastic fibrils. It is derived from the mesoderm and in a broad sense includes the collagenous, elastic, mucous, reticular, osseous, and cartilaginous tissue. Some also include the blood in this group of tissues. Connective tissue is classified according to concentration of fibers as loose (areolar) and dense, the latter having more abundant fibers than the former.[accessedResource: BTO:0000421][accessDate: 04-11-2010]
BTO:0000421
MAT:0000301
Tomasz Adamusiak
The tissue which binds together and is the support of the various structures of the body. It is made up of fibroblasts, fibroglia, collagen fibrils, and elastic fibrils. It is derived from the mesoderm and in a broad sense includes the collagenous, elastic, mucous, reticular, osseous, and cartilaginous tissue. Some also include the blood in this group of tissues. Connective tissue is classified according to concentration of fibers as loose (areolar) and dense, the latter having more abundant fibers than the former.
muscle attachment cell
Portion of connective tissue
Tissue which consists of fibroblasts, osteocytes or chondrocytes and intercellular matrix produced by these cells. Examples: bone (tissue), dense regular elastic tissue, areolar tissue, neuroglia, adipose tissue.
tendon cell
Tomasz Adamusiak
ILSXISS16/TejJ
http://jaxmice.jax.org/strain/009262.html
true
2.4
now using NCI taxon URI:
http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702
obsolete_Arbisopsis thaliana
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cc[accessedResource: MO_834][accessDate: 04-11-2010]
http://www.ebi.ac.uk/efo/EFO_0001714
A cubic centimeter is a volume unit which is equal to one millionth of a cubic meter or 10^[-9] m^[3], or to 1 ml.
Tomasz Adamusiak
cc
cm^3
A volume unit which is equal to one millionth of a cubic meter or 10^[-9] m^[3], or to 1 ml.
true
James Malone
Jie Zheng
cubic centimeter
MO_834
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#cc
acetate
Reticuloendothelial System, Bone Marrow[accessedResource: NCIt:C12431][accessDate: 10-05-2010]
The tissue occupying the spaces of bone. It consists of blood vessel sinuses and a network of hematopoietic cells which give rise to the red cells, white cells, and megakaryocytes.[accessedResource: NCIt:C12431][accessDate: 10-05-2010]
Bone Marrow
obsolete_bone marrow
NCIt:C12431
Duplicate term : see bone marrow EFO_0000868
The tissue occupying the spaces of bone. It consists of blood vessel sinuses and a network of hematopoietic cells which give rise to the red cells, white cells, and megakaryocytes.
Bone Marrow[accessedResource: NCIt:C12431][accessDate: 10-05-2010]
Reticuloendothelial System, Bone Marrow
true
ischemia reperfusion injury
ischaemia reperfusion injury
James Malone
A temporal measurement of the period after successful treatment in which there is no appearance of the symptoms or effects of the disease.
disease free survival
James Malone
CS57737 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158761&type=germplasm
CS57737
http://www.arabidopsis.org/servlets/TairObject?id=1005158761&type=germplasm
James Malone
Tomasz Adamusiak
60 seconds duration of centrifugation
A temporal measurement of the time between two specified points.
duration
NIFSTD:birnlex_2052
Tomasz Adamusiak
pharyngeal arch 3-7
ZFA:0001613
Ele Holloway
James Malone
MJ
Uterine Corpus Leiomyomata[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
NCIt:C3434
Fibroid of the Corpus Uteri[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Leiomyoma of uterus, unspecified[accessedResource: ICD9:218.9][accessDate: 04-11-2010]
Fibroid of Uterine Body[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Leiomyoma of Uterine Corpus[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Leiomyoma of the Uterine Body
A benign smooth muscle neoplasm arising from the body of the uterus. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.
UTERINE LEIOMYOMA NOS
Leiomyofibroma
GeneRIF:15572421
Fibroid of Uterine Corpus[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Leiomyoma of the Body of Uterus[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
GeneRIF:15704521
Body of Uterus Fibroid
Uterine leiomyoma (disorder)
Leiomyoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Leiomyoma, no ICD-O subtype
Fibroid of Corpus Uteri
Uterine Body Leiomyoma[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Fibromyomas
Leiomyoma of Uterine Body
GeneRIF:11756572
Fibroid of Body of Uterus[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
MSH:D007889
GeneRIF:15604209
Fibroid of Body of Uterus
GeneRIF:15972578
Fibroid of Corpus Uteri[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
ICD9:218.9
An uncommon benign neoplasm arising from the bone. It is characterized by the presence of spindle-shaped or stellate chondrocytes, a lobulated growth pattern, myxoid stroma formation, and sometimes multinucleated giant cells. It has been associated with chromosomal rearrangement of 6q13 and 6q25 bands. The most common clinical symptom is mild, localized pain.
GeneRIF:15231681
A benign smooth muscle neoplasm arising from the body of the uterus. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Leiomyomas
Uterine leiomyoma NOS (disorder)[accessedResource: SNOMEDCT:189106003][accessDate: 04-11-2010]
Fibroids[accessedResource: MSH:D007889][accessDate: 04-11-2010]
Tumors, Fibroid[accessedResource: MSH:D007889][accessDate: 04-11-2010]
Myofibroma
SNOMEDCT:189106003
Uterine Corpus Fibroid[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Plexiform leiomyoma[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
GeneRIF:14632190
Fibroid of the Uterine Body[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Leiomyoma, no ICD-O subtype (morphologic abnormality)
Fibroid of the Uterine Body
Uterine Corpus Leiomyoma
uterine leiomyoma (disorder)[accessedResource: DOID:13223][accessDate: 04-11-2010]
Leiomyoma[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Corpus Uteri Fibroid[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
GeneRIF:12215337
Fibroids
GeneRIF:14698203
Myofibroma[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Fibromyoma[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Tumor, Fibroid
GeneRIF:12649198
Leiomyoma of the Uterine Body[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
GeneRIF:12634644
Body of Uterus Leiomyoma
Fibroid Tumors
Uterine leiomyoma
A benign tumor derived from smooth muscle tissue, also known as a fibroid tumor. They rarely occur outside of the UTERUS and the GASTROINTESTINAL TRACT but can occur in the SKIN and SUBCUTANEOUS TISSUE, probably arising from the smooth muscle of small blood vessels in these tissues.
Leiomyofibroma[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Leiomyoma, no ICD-O subtype[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
GeneRIF:16024248
GeneRIF:15769981
Uterine leiomyoma - fibroids[accessedResource: SNOMEDCT:95315005][accessDate: 04-11-2010]
Lipoleiomyoma[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
GeneRIF:12594000
Leiomyoma of body of uterus[accessedResource: SNOMEDCT:95315005][accessDate: 04-11-2010]
Uterine Corpus Leiomyoma[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
GeneRIF:15322223
Leiomyoma of the Uterine Corpus[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Fibroid of the Body of Uterus
Fibroid of the Uterine Corpus[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Uterine Fibromas[accessedResource: MSH:D007889][accessDate: 04-11-2010]
Body of Uterus Fibroid[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Fibroid
Leiomyoma of the Uterine Corpus
Uterine leiomyoma, NOS[accessedResource: SNOMEDCT:95315005][accessDate: 04-11-2010]
Fibroid Tumor[accessedResource: MSH:D007889][accessDate: 04-11-2010]
GeneRIF:11865300
leiomyoma of uterus, unspecified
Uterine Corpus Fibroid
GeneRIF:12097287
Fibroma, Uterine
Fibroid uterus
Leiomyoma of Body of Uterus
Corpus Uteri Fibroid
Leiomyoma of Uterine Corpus
UTERUS FIBROMA
GeneRIF:15033949
Leiomyoma of the Body of Uterus
Fibroleiomyoma
uterine leiomyoma[accessedResource: DOID:13223][accessDate: 04-11-2010]
uterine fibroid
Uterine leiomyoma - fibroids
Body of Uterus Leiomyoma[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
James Malone
Uterine Body Fibroid[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
GeneRIF:15083381
GeneRIF:15474102
GeneRIF:15051039
GeneRIF:12634633
GeneRIF:14557488
Fibroid of Uterine Body
Fibroleiomyoma[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Leiomyoma of Uterine Body[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Fibroid of the Body of Uterus[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Leiomyoma of the Corpus Uteri[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
GeneRIF:16009172
Leiomyoma of Corpus Uteri[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
leiomyoma of Corpus Uteri
GeneRIF:12766905
Uterine Fibromas
Leiomyoma, NOS[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Fibroid of Uterine Corpus
Corpus Uteri Leiomyoma[accessedResource: NCIt:C3434][accessDate: 04-11-2010]
Lipoleiomyoma
Uterine fibroids
GeneRIF:15334541
Plexiform leiomyoma
GeneRIF:12548199
GeneRIF:15706419
Fibromyoma
GeneRIF:15749523
SNOMEDCT:44598004
GeneRIF:12065682
Leiomyoma
GeneRIF:15536154
Uterine Body Fibroid
GeneRIF:12177782
SNOMEDCT:95315005
Uterine Body Leiomyoma
Fibroid uterus[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Fibromyomas[accessedResource: MSH:D007889][accessDate: 04-11-2010]
GeneRIF:14995917
Fibroid of the Corpus Uteri
GeneRIF:11788902
DOID:13223
Leiomyomas[accessedResource: MSH:D007889][accessDate: 04-11-2010]
Fibroma, Uterine[accessedResource: MSH:D007889][accessDate: 04-11-2010]
ICD9:218
uterine leiomyoma NOS (disorder)
A benign tumor derived from smooth muscle tissue, also known as a fibroid tumor. They rarely occur outside of the UTERUS and the GASTROINTESTINAL TRACT but can occur in the SKIN and SUBCUTANEOUS TISSUE, probably arising from the smooth muscle of small blood vessels in these tissues.[accessedResource: MSH:D007889][accessDate: 04-11-2010]
GeneRIF:15004438
Corpus Uteri Leiomyoma
Fibroid of the Uterine Corpus
Uterine fibroids[accessedResource: SNOMEDCT:44598004][accessDate: 04-11-2010]
Leiomyoma of the Corpus Uteri
Uterine Corpus Leiomyomata
Leiomyoma, NOS
UTERUS FIBROMA[accessedResource: DOID:13223][accessDate: 04-11-2010]
Fibroid[accessedResource: MSH:D007889][accessDate: 04-11-2010]
retinoblastoma
Ele Holloway
James Malone
Natural Language Generator 8th April 2010
A b117h is an ara c resistant murine leukemia.
B117H
C
A temperature derived unit which is equal to one Kelvin degree. However, they have their zeros at different points. The Centigrade scale has its zero at 273.15 K.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#degrees_C[accessedResource: MO_980][accessDate: 04-11-2010]
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#degrees_C
Degree celsius is a temperature derived unit which is equal to one Kelvin degree. However, they have their zeros at different points. The Centigrade scale has its zero at 273.15 K.
MO_980
degree celsius
http://www.ebi.ac.uk/efo/EFO_0001700
Tomasz Adamusiak
degree centigrade
true
James Malone
Malignant Tumor of the Soft Tissue[accessedResource: NCIt:C4867][accessDate: 04-11-2010]
NCIt:C9118
DOID:1115
Soft Tissue Sarcoma
Sarcoma of the Soft Tissue
MAL NEO SOFT TISSUE NEC[accessedResource: ICD9:171.8][accessDate: 04-11-2010]
GeneRIF:15710230
Malignant Soft Tissue Tumor
MAL NEO SOFT TISSUE HEAD
Sarcoma of Soft Tissue and Bone
Sarcoma of Soft Tissue and Bone[accessedResource: NCIt:C9118][accessDate: 04-11-2010]
Malignant neoplasm of connective and other soft tissue of abdomen[accessedResource: ICD9:171.5][accessDate: 04-11-2010]
Malignant Soft Tissue Tumor[accessedResource: NCIt:C4867][accessDate: 04-11-2010]
GeneRIF:12610779
Mesenchymal tumor, malignant[accessedResource: SNOMEDCT:2424003][accessDate: 04-11-2010]
GeneRIF:11953898
Sarcoma, no ICD-O subtype (morphologic abnormality)
Malignant neoplasm of connective and other soft tissue of thorax
GeneRIF:16154137
ICD9:171.8
A cancer that affects connective tissue resulting in mesoderm proliferation.[accessedResource: DOID:1115][accessDate: 04-11-2010]
A usually aggressive malignant mesenchymal cell tumor most commonly arising from muscle, fat, fibrous tissue, bone, cartilage, and blood vessels. Sarcomas occur in both children and adults. The prognosis depends largely on the degree of differentiation (grade) of the tumor. Representative subtypes are liposarcoma, leiomyosarcoma, osteosarcoma, and chondrosarcoma.
Sarcoma, NOS[accessedResource: SNOMEDCT:2424003][accessDate: 04-11-2010]
GeneRIF:15018431
Malignant neoplasm of connective and other soft tissue of pelvis[accessedResource: ICD9:171.6][accessDate: 04-11-2010]
MAL NEO SOFT TISSUE HEAD[accessedResource: ICD9:171.0][accessDate: 04-11-2010]
[M]Sarcoma NOS[accessedResource: SNOMEDCT:189764008][accessDate: 04-11-2010]
Sarcoma, no ICD-O subtype
Soft tissue tumour, malignant[accessedResource: SNOMEDCT:2424003][accessDate: 04-11-2010]
connective and soft tissue neoplasm
SNOMEDCT:269469005
MAL NEO SOFT TIS ABDOMEN[accessedResource: ICD9:171.5][accessDate: 04-11-2010]
SNOMEDCT:187985009
Malignant neoplasm of connective and other soft tissue[accessedResource: ICD9:171][accessDate: 04-11-2010]
Malignant neoplasm of connective and other soft tissue
connective and soft tissue neoplasm[accessedResource: DOID:1115][accessDate: 04-11-2010]
Malignant Soft Tissue Neoplasm[accessedResource: NCIt:C4867][accessDate: 04-11-2010]
GeneRIF:12539045
Malignant neoplasm of connective and other soft tissue of lower limb, including hip[accessedResource: ICD9:171.3][accessDate: 04-11-2010]
Malignant neoplasm of soft tissue (disorder)[accessedResource: SNOMEDCT:269469005][accessDate: 04-11-2010]
A usually aggressive malignant mesenchymal cell tumor most commonly arising from muscle, fat, fibrous tissue, bone, cartilage, and blood vessels. Sarcomas occur in both children and adults. The prognosis depends largely on the degree of differentiation (grade) of the tumor. Representative subtypes are liposarcoma, leiomyosarcoma, osteosarcoma, and chondrosarcoma.[accessedResource: NCIt:C9118][accessDate: 04-11-2010]
A malignant mesenchymal neoplasm arising from muscle tissue, adipose tissue, blood vessels, fibrous tissue, or other supportive tissues excluding the bones.[accessedResource: NCIt:C9306][accessDate: 04-11-2010]
GeneRIF:14507652
ICD9:171.4
GeneRIF:12435619
[M]Sarcoma NOS
Malignant Soft Tissue Neoplasm
ICD9:171.0
Sarcoma of the Soft Tissue[accessedResource: NCIt:C9306][accessDate: 04-11-2010]
Soft tissue tumour, malignant
Malignant neoplasm of connective and other soft tissue of pelvis
GeneRIF:12112526
Mesenchymal tumor, malignant
Malignant neoplasm of connective and other soft tissue of trunk, unspecified
MAL NEO SOFT TISSUE NOS[accessedResource: ICD9:171.9][accessDate: 04-11-2010]
GeneRIF:14612455
Sarcoma, no ICD-O subtype[accessedResource: SNOMEDCT:2424003][accessDate: 04-11-2010]
GeneRIF:16327442
A cancer that affects connective tissue resulting in mesoderm proliferation.
Malignant neoplasm of soft tissue (disorder)
ICD9:171.9
Malignant Tumor of the Soft Tissue
SNOMEDCT:2424003
Malignant tumour of soft tissue
MAL NEOPL TRUNK NOS[accessedResource: ICD9:171.7][accessDate: 04-11-2010]
Sarcoma, no ICD-O subtype (morphologic abnormality)[accessedResource: SNOMEDCT:2424003][accessDate: 04-11-2010]
Malignant neoplasm of connective and other soft tissue of abdomen
MAL NEO SOFT TISSUE NOS
MAL NEO SOFT TIS ABDOMEN
Malignant tumour of soft tissue[accessedResource: SNOMEDCT:269469005][accessDate: 04-11-2010]
Malignant neoplasm of connective and other soft tissue of head, face, and neck[accessedResource: ICD9:171.0][accessDate: 04-11-2010]
A malignant mesenchymal neoplasm arising exclusively from the soft tissues. Representative examples include soft tissue sarcoma, extraosseous Ewing sarcoma/peripheral primitive neuroectodermal tumor, and malignant hemangiopericytoma.
Connective Tissue Sarcoma
GeneRIF:15716602
Malignant neoplasm of other specified sites of connective and other soft tissue[accessedResource: ICD9:171.8][accessDate: 04-11-2010]
Connective Tissue Sarcoma[accessedResource: NCIt:C9306][accessDate: 04-11-2010]
Sarcoma of the Soft Tissue and Bone
MAL NEO SOFT TIS PELVIS
Mesenchymal tumour, malignant
MAL NEO SOFT TISSUE LEG
A malignant mesenchymal neoplasm arising exclusively from the soft tissues. Representative examples include soft tissue sarcoma, extraosseous Ewing sarcoma/peripheral primitive neuroectodermal tumor, and malignant hemangiopericytoma.[accessedResource: NCIt:C4867][accessDate: 04-11-2010]
Soft tissue sarcoma[accessedResource: SNOMEDCT:2424003][accessDate: 04-11-2010]
Sarcoma of Soft Tissue[accessedResource: NCIt:C9306][accessDate: 04-11-2010]
Malignant Tumor of Soft Tissue[accessedResource: NCIt:C4867][accessDate: 04-11-2010]
Malignant neoplasm of connective and other soft tissue of lower limb, including hip
Malignant neoplasm of connective and other soft tissue of upper limb, including shoulder[accessedResource: ICD9:171.2][accessDate: 04-11-2010]
ICD9:171.3
ICD9:171.5
Malignant neoplasm of connective and other soft tissue of head, face, and neck
Malignant Neoplasm of Soft Tissue[accessedResource: NCIt:C4867][accessDate: 04-11-2010]
tumor of soft tissue and skeleton[accessedResource: DOID:1115][accessDate: 04-11-2010]
Malignant neoplasm of connective and other soft tissue of trunk, unspecified[accessedResource: ICD9:171.7][accessDate: 04-11-2010]
Malignant neoplasm of connective and other soft tissue of upper limb, including shoulder
MAL NEO SOFT TISSUE ARM[accessedResource: ICD9:171.2][accessDate: 04-11-2010]
James Malone
Malignant neoplasm of connective and other soft tissue (disorder)
MAL NEO SOFT TIS PELVIS[accessedResource: ICD9:171.6][accessDate: 04-11-2010]
Sarcoma of Soft Tissue
tumor of soft tissue and skeleton
[M]Sarcoma NOS (morphologic abnormality)
Sarcoma, NOS
Malignant Neoplasm of the Soft Tissue
A malignant mesenchymal neoplasm arising from muscle tissue, adipose tissue, blood vessels, fibrous tissue, or other supportive tissues excluding the bones.
MAL NEO SOFT TISSUE NEC
GeneRIF:14710346
GeneRIF:15809709
MAL NEO SOFT TIS THORAX[accessedResource: ICD9:171.4][accessDate: 04-11-2010]
Sarcoma of the Soft Tissue and Bone[accessedResource: NCIt:C9118][accessDate: 04-11-2010]
MAL NEO SOFT TISSUE ARM
MAL NEO SOFT TIS THORAX
Mesenchymal tumour, malignant[accessedResource: SNOMEDCT:2424003][accessDate: 04-11-2010]
Malignant Neoplasm of the Soft Tissue[accessedResource: NCIt:C4867][accessDate: 04-11-2010]
Malignant neoplasm of connective and other soft tissue, site unspecified
[M]Sarcoma NOS (morphologic abnormality)[accessedResource: SNOMEDCT:189764008][accessDate: 04-11-2010]
ICD9:171
GeneRIF:15201968
MAL NEOPL TRUNK NOS
NCIt:C9306
Malignant neoplasm of connective and other soft tissue (disorder)[accessedResource: SNOMEDCT:187985009][accessDate: 04-11-2010]
Malignant neoplasm of other specified sites of connective and other soft tissue
Malignant neoplasm of connective and other soft tissue, site unspecified[accessedResource: ICD9:171.9][accessDate: 04-11-2010]
Malignant neoplasm of connective and other soft tissue of thorax[accessedResource: ICD9:171.4][accessDate: 04-11-2010]
SNOMEDCT:189764008
ICD9:171.7
Type of cancer of the bone, cartilage, fat, muscle, blood vessels, or other connective or supportive tissue.
MAL NEO SOFT TISSUE LEG[accessedResource: ICD9:171.3][accessDate: 04-11-2010]
Malignant Neoplasm of Soft Tissue
Malignant Tumor of Soft Tissue
ICD9:171.6
ICD9:171.2
NCIt:C4867
sarcoma
Ele Holloway
James Malone
NCI-H322
Estradiol
InChI=1/C18H24O2/c1-18-9-8-14-13-5-3-12(19)10-11(13)2-4-15(14)16(18)6-7-17(18)20/h3,5,10,14-17,19-20H,2,4,6-9H2,1H3/t14-,15-,16+,17+,18+/m1/s1
[H][C@]12CC[C@]3(C)[C@@H](O)CC[C@@]3([H])[C@]1([H])CCc1cc(O)ccc21
17beta-estradiol
InChIKey=VOXZDWNPVJITMN-ZBRFXRBCBJ
http://www.ebi.ac.uk/efo/EFO_0001468
C18H24O2
beta-Estradiol
cis-estradiol
17beta oestradiol
An estradiol that has formula C18H24O2.
The 17beta-isomer of estradiol.
CHEBI:16469
estra-1,3,5(10)-triene-3,17beta-diol
(17beta)-estra-1,3,5(10)-triene-3,17-diol
Faucial tonsil[accessedResource: FMA:9610][accessDate: 04-11-2010]
James Malone
palatine tonsil
FMA:9610
NCIt:C33250
Faucial tonsil
An assay where chromatin immunoprecipitation (ChIP) is used in combination with tiling microarray technology
ChIP-chip by tiling array
James Malone
MT3
Ele Holloway
EV:0100099
James Malone
FMAID:19667
XAO:0000153
WBbt:0005777
The tube through which urine leaves the body. It empties urine from the bladder.[accessedResource: BTO:0001426][accessDate: 04-11-2010]
The tube through which urine leaves the body. It empties urine from the bladder.
excretory duct[accessedResource: MAT:0000121][accessDate: 04-11-2010]
urethra
MA:0000379
Organ with organ cavity which connects the cavity of the urinary bladder to the exterior. Examples: There is only one urethra.
excretory duct
BTO:0001426
EMAPA:18692
MAT:0000121
Tomasz Adamusiak
rostral blood island
ZFA:0005029
James Malone
GM12761
GeneRIF:15599595
Cancer of the Bladder[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
Bladder carcinoma is a carcinoma arising from the bladder epithelium. Approximately 90% of the bladder carcinomas are transitional cell carcinomas. The remainder are squamous cell carcinomas, adenocarcinomas and small cell neuroendocrine carcinomas.
carcinoma of urinary bladder
GeneRIF:12594814
Urinary Bladder Carcinoma
Urinary Bladder Cancer[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
GeneRIF:16215315
Cancer of the Bladder
GeneRIF:16061860
Urinary Bladder Carcinoma[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
Cancer of Urinary Bladder
A carcinoma arising from the bladder epithelium. Approximately 90% of the bladder carcinomas are transitional cell carcinomas. The remainder are squamous cell carcinomas, adenocarcinomas and small cell neuroendocrine carcinomas.
Carcinoma of the Bladder[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
DOID:4007
GeneRIF:15734831
GeneRIF:12488298
Carcinoma of the Urinary Bladder[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
Cancer of Urinary Bladder[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
Cancer of the Urinary Bladder[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
GeneRIF:14654522
A carcinoma that forms in tissues of the bladder.
Carcinoma of bladder[accessedResource: SNOMEDCT:255108000][accessDate: 04-11-2010]
carcinoma of bladder
GeneRIF:12225859
GeneRIF:15942628
Cancer of Bladder[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
GeneRIF:15386310
GeneRIF:15361851
A carcinoma that arises_from tissues of the bladder.
SNOMEDCT:255108000
GeneRIF:12820373
GeneRIF:15516981
GeneRIF:12492368
Carcinoma of the Bladder
Cancer of the Urinary Bladder
A carcinoma arising from the bladder epithelium. Approximately 90% of the bladder carcinomas are transitional cell carcinomas. The remainder are squamous cell carcinomas, adenocarcinomas and small cell neuroendocrine carcinomas.[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
James Malone
Urinary Bladder Cancer
bladder carcinoma
GeneRIF:15032076
Carcinoma of the Urinary Bladder
carcinoma of bladder (disorder)[accessedResource: DOID:4007][accessDate: 04-11-2010]
carcinoma of bladder (disorder)
Bladder Cancer[accessedResource: NCIt:C4912][accessDate: 04-11-2010]
A carcinoma that arises_from tissues of the bladder.[accessedResource: DOID:4007][accessDate: 04-11-2010]
GeneRIF:11749692
carcinoma of urinary bladder[accessedResource: DOID:4007][accessDate: 04-11-2010]
GeneRIF:15140401
Cancer of Bladder
Bladder Cancer
NCIt:C4912
Pale Body
Paleostriatum
Nucleus of brain which is located medially to the putamen and laterally to the internal capsule.
Paleostriatum[accessedResource: FMAID:61835][accessDate: 04-11-2010]
pallidum[accessedResource: NIFSTD:birnlex_1234][accessDate: 04-11-2010]
Subcortical nucleus, functionally part of the basal ganglia, which consists of two segments the external (or lateral) and internal (or medial) separated by the medial medullary lamina in primates. In rodents, The globus pallidus lateral is separated from the medial segment by the fibers of the internal capsule/cerebral peduncle.[accessedResource: NIFSTD:birnlex_1234][accessDate: 04-11-2010]
James Malone
pallidum
The smaller and more medial part of the lentiform nucleus of the brain, separated from the putamen by the lateral medullary lamina. In official anatomic nomenclature, it is divided by the medial medullary lamina into two parts, lateral and medial, both of which have extensive connections with the corpus striatum, thalamus, and mesencephalon.
NIFSTD:birnlex_1234
BTO:0002246
Pale Body[accessedResource: NIFSTD:birnlex_1234][accessDate: 04-11-2010]
MA:0000890
Tomasz Adamusiak
The smaller and more medial part of the lentiform nucleus of the brain, separated from the putamen by the lateral medullary lamina. In official anatomic nomenclature, it is divided by the medial medullary lamina into two parts, lateral and medial, both of which have extensive connections with the corpus striatum, thalamus, and mesencephalon.[accessedResource: BTO:0002246][accessDate: 04-11-2010]
MAT:0000510
Subcortical nucleus, functionally part of the basal ganglia, which consists of two segments the external (or lateral) and internal (or medial) separated by the medial medullary lamina in primates. In rodents, The globus pallidus lateral is separated from the medial segment by the fibers of the internal capsule/cerebral peduncle.
EV:0100188
FMAID:61835
globus pallidus
GeneRIF:14699425
mixed bipolar disorder[accessedResource: DOID:3312][accessDate: 04-11-2010]
Mania
A major affective disorder marked by severe mood swings (manic or major depressive episodes) and a tendency to remission and recurrence (MeSH).
GeneRIF:15450783
BIPOLAR DISORDER NOS
GeneRIF:15257153
A major affective disorder marked by severe mood swings (manic or major depressive episodes) and a tendency to remission and recurrence.[accessedResource: MSH:D001714][accessDate: 04-11-2010]
GeneRIF:11840509
mixed bipolar affective disorder (disorder)[accessedResource: DOID:3312][accessDate: 04-11-2010]
GeneRIF:15539862
Manic Bipolar Affective disorder[accessedResource: DOID:3312][accessDate: 04-11-2010]
[X]Bipolar affective disorder, unspecified[accessedResource: SNOMEDCT:192365005][accessDate: 04-11-2010]
mixed bipolar affective disorder (disorder)
GeneRIF:15111989
Manic Depressive Psychosis
GeneRIF:12496953
GeneRIF:12647258
GeneRIF:11702051
MDI - Manic-depressive illness
A major affective disorder marked by severe mood swings (manic or major depressive episodes) and a tendency to remission and recurrence.
SNOMEDCT:191647000
GeneRIF:12949534
GeneRIF:11930170
GeneRIF:15838535
[X]Bipolar affective disorder, unspecified
Manic-depressive syndrome NOS[accessedResource: DOID:3312][accessDate: 04-11-2010]
GeneRIF:15806582
State, Manic
MANIC DIS
Bipolar affective disorder
GeneRIF:15167705
Bipolar disorder (disorder)
GeneRIF:12111480
GeneRIF:12815743
Unspecified bipolar affective disorder, unspecified (disorder)
Manic-depressive illness[accessedResource: SNOMEDCT:13746004][accessDate: 04-11-2010]
GeneRIF:14743183
Manic Depressive disorder
GeneRIF:15261714
Manic State[accessedResource: MSH:D001714][accessDate: 04-11-2010]
GeneRIF:14678452
Bipolar affective disorder, manic, unspecified degree[accessedResource: DOID:3312][accessDate: 04-11-2010]
SNOMEDCT:191646009
Bipolar Depression
Depressive-manic psych.[accessedResource: DOID:3312][accessDate: 04-11-2010]
Tomasz Adamusiak
Manic bipolar I disorder (disorder)[accessedResource: DOID:3312][accessDate: 04-11-2010]
Manic Depressive disorder[accessedResource: DOID:3312][accessDate: 04-11-2010]
GeneRIF:16044173
mixed bipolar I disorder (disorder)
Bipolar Depression[accessedResource: NIFSTD:birnlex_12754][accessDate: 04-11-2010]
GeneRIF:14531760
GeneRIF:15885920
[X]Bipolar affective disorder, unspecified (disorder)
bipolar disorder
GeneRIF:12082561
GeneRIF:12808434
Manias
Manic Disorders[accessedResource: MSH:D001714][accessDate: 04-11-2010]
GeneRIF:12555230
Manic Disorders
GeneRIF:11840505
mixed bipolar disorder
GeneRIF:12140781
Bipolar affective disorder[accessedResource: SNOMEDCT:13746004][accessDate: 04-11-2010]
Manic-Depression[accessedResource: NCIt:C34423][accessDate: 04-11-2010]
Manic-Depression
Unspecified bipolar affective disorder, unspecified[accessedResource: SNOMEDCT:191647000][accessDate: 04-11-2010]
Bipolar affective disorder, current episode depression (disorder)
GeneRIF:15660667
GeneRIF:15622415
MANIC DEPRESSIVE ILLNESS
Manic Depressive Psychosis[accessedResource: MSH:D001714][accessDate: 04-11-2010]
GeneRIF:15576061
Manic Bipolar Affective disorder
Bipolar affective disorder, mixed, unspecified degree
DOID:3312
GeneRIF:14582141
GeneRIF:15211633
Manic-depressive syndrome NOS
NCIt:C34423
[X]Bipolar affective disorder, unspecified (disorder)[accessedResource: SNOMEDCT:192365005][accessDate: 04-11-2010]
Bipolar affective disorder, mixed, unspecified degree[accessedResource: DOID:3312][accessDate: 04-11-2010]
NIFSTD:birnlex_12754
BIPOLAR DISORDER NOS[accessedResource: ICD9:296.80][accessDate: 04-11-2010]
Bipolar Disorders
Psychoses, Bipolar Affective[accessedResource: MSH:D001714][accessDate: 04-11-2010]
GeneRIF:14729229
GeneRIF:15983625
GeneRIF:14985387
GeneRIF:15824745
GeneRIF:15940297
Psychoses, Bipolar Affective
Manic bipolar I disorder (disorder)
GeneRIF:16168956
GeneRIF:12161822
Unspecified bipolar affective disorder, unspecified (disorder)[accessedResource: SNOMEDCT:191647000][accessDate: 04-11-2010]
bipolar disorder manic phase[accessedResource: DOID:3312][accessDate: 04-11-2010]
ICD9:296.80
GeneRIF:15737668
Bipolar affective disorder, manic, unspecified degree
Bipolar Disorders[accessedResource: MSH:D001714][accessDate: 04-11-2010]
Bipolar disorder (disorder)[accessedResource: SNOMEDCT:13746004][accessDate: 04-11-2010]
GeneRIF:12664313
GeneRIF:14729237
mixed bipolar affective disorder, NOS (disorder)[accessedResource: DOID:3312][accessDate: 04-11-2010]
GeneRIF:15820318
GeneRIF:12097806
GeneRIF:12610658
Bipolar disorder, unspecified[accessedResource: ICD9:296.80][accessDate: 04-11-2010]
GeneRIF:15630410
Manias[accessedResource: MSH:D001714][accessDate: 04-11-2010]
Unspecified bipolar affective disorder[accessedResource: SNOMEDCT:191646009][accessDate: 04-11-2010]
GeneRIF:14966479
GeneRIF:14604453
Psychoses, Manic Depressive[accessedResource: MSH:D001714][accessDate: 04-11-2010]
Bipolar affective disorder , current episode mixed (disorder)[accessedResource: DOID:3312][accessDate: 04-11-2010]
Affective Bipolar Psychosis[accessedResource: NIFSTD:birnlex_12754][accessDate: 04-11-2010]
Unspecified bipolar affective disorder, NOS
States, Manic[accessedResource: MSH:D001714][accessDate: 04-11-2010]
MDI - Manic-depressive illness[accessedResource: SNOMEDCT:13746004][accessDate: 04-11-2010]
Bipolar Affective Psychosis
GeneRIF:12232779
GeneRIF:15917720
MANIC DIS[accessedResource: MSH:D001714][accessDate: 04-11-2010]
SNOMEDCT:192365005
GeneRIF:11901356
GeneRIF:15050861
Depressive-manic psych.
Unspecified bipolar affective disorder, NOS (disorder)
Manic Disorder
Unspecified bipolar affective disorder, NOS[accessedResource: SNOMEDCT:191654006][accessDate: 04-11-2010]
MSH:D001714
Bipolar affective disorder, current episode depression (disorder)[accessedResource: DOID:3312][accessDate: 04-11-2010]
mixed bipolar I disorder (disorder)[accessedResource: DOID:3312][accessDate: 04-11-2010]
GeneRIF:12192619
Psychoses, Manic-Depressive
A major affective disorder marked by severe mood swings (manic or major depressive episodes) and a tendency to remission and recurrence (MeSH).[accessedResource: NIFSTD:birnlex_12754][accessDate: 04-11-2010]
GeneRIF:14967554
Mania[accessedResource: MSH:D001714][accessDate: 04-11-2010]
GeneRIF:12565145
Unspecified bipolar affective disorder, unspecified
manic disorder[accessedResource: DOID:3312][accessDate: 04-11-2010]
GeneRIF:16044170
Unspecified bipolar affective disorder (disorder)
Bipolar affective disorder , current episode mixed (disorder)
GeneRIF:12782961
GeneRIF:12498692
Unspecified bipolar affective disorder, NOS (disorder)[accessedResource: SNOMEDCT:191654006][accessDate: 04-11-2010]
BIPOLAR DIS
GeneRIF:12951196
mixed bipolar affective disorder, NOS (disorder)
James Malone
Bipolar disorder, unspecified
GeneRIF:15909293
Unspecified bipolar affective disorder
Bipolar affective disorder, unspecified (disorder)[accessedResource: DOID:3312][accessDate: 04-11-2010]
States, Manic
BIPOLAR DIS[accessedResource: MSH:D001714][accessDate: 04-11-2010]
SNOMEDCT:13746004
SNOMEDCT:191654006
GeneRIF:15799788
GeneRIF:12565915
bipolar disorder manic phase
GeneRIF:15452587
obsolete - synonym with experiment type
true
experimental design refers to both observational and experimental (perturbational) studies. The organizing principles of the study including the relationships between assays and the steps taken to interpret the data.
obsolete_experimental design
Ele Holloway
James Malone
PC-10
James Malone
Antibody profiling experiment
An assay where proteins in a sample are detected, quantified or otherwise analysed, e.g. antibody profiling
proteomic profiling
ArrayExpress production team
NCIt:C33064
Medial Collateral Ligament of the Knee[accessedResource: NCIt:C33064][accessDate: 04-11-2010]
Medial Collateral Ligament of the Knee
medial collateral ligament
James Malone
hypochlorous acid
16737
36737
7790-92-3
HClO
hypochlorous acid
HOCl
phosmet
24261
4261
732-11-6
C11H12NO4PS2
S-[(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)methyl] O,O-dimethyl dithiophosphate
James Malone
CS57835 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158859&type=germplasm
CS57835
http://www.arabidopsis.org/servlets/TairObject?id=1005158859&type=germplasm
James Malone
CS57521 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?type=germplasm&id=1005152522
CS57521
http://www.arabidopsis.org/servlets/TairObject?type=germplasm&id=1005152522
The integument of an animal (as a fur-bearing mammal or a bird) separated from the body usually with its hair or feathers.
XAO:0000023
Nonparenchymatous organ that consists of the epidermis, dermis and sets of hair and nails and which surrounds the entire body. Subdivisions of the skin surround various body parts; as a whole, the skin constitutes the external layer of the body. Examples: There is only one skin.
MAT:0000284
MFO:0003200
FMAID:7163
skin
EHDAA:6530
The integument of an animal (as a fur-bearing mammal or a bird) separated from the body usually with its hair or feathers.[accessedResource: BTO:0001253][accessDate: 04-11-2010]
James Malone
Skin of body
EV:0100152
EMAPA:17525
SAEL:95
Skin of body[accessedResource: FMAID:7163][accessDate: 04-11-2010]
BTO:0001253
BTO:0000432
corpus cardiacum
A pair of neurohemal organs located on the walls of the aorta just behind the brain. The corpora cardiaca release their store of PTTH only after they receive a signal from neurosecretory cells in the brain.
James Malone
corpora cardiaca[accessedResource: BTO:0000432][accessDate: 04-11-2010]
A pair of neurohemal organs located on the walls of the aorta just behind the brain. The corpora cardiaca release their store of PTTH only after they receive a signal from neurosecretory cells in the brain.[accessedResource: BTO:0000432][accessDate: 04-11-2010]
corpora cardiaca
FBbt:00005799
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#control_spike_calibration[accessedResource: MO_364][accessDate: 04-11-2010]
James Malone
A process in which a reporter that could be hybridized to an exogenously added nucleic acid or protein (spike) before or during hybridization is used as a control for data processing.
control spike calibration
MO_364
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#control_spike_calibration
Larval:Days 21-29[accessedResource: ZFS:0000041][accessDate: 04-11-2010]
James Malone
larval day 21-29
ZFS:0000041
Larval:Days 21-29
CL:0000216
A supporting cell projecting inward from the basement membrane of seminiferous tubules. They surround and nourish the developing male germ cells and secrete androgen binding protein. Their tight junctions with the spermatogonia and spermatocytes provide a blood-testis barrier.
Tomasz Adamusiak
Sertoli cell
A supporting cell projecting inward from the basement membrane of seminiferous tubules. They surround and nourish the developing male germ cells and secrete androgen binding protein. Their tight junctions with the spermatogonia and spermatocytes provide a blood-testis barrier.[accessedResource: CL:0000216][accessDate: 04-11-2010]
midbrain tegmentum
Tegmentum of midbrain
EMAPA:18215
tegmentum
midbrain tegmentum[accessedResource: ZFA:0001354][accessDate: 04-11-2010]
mesencephalic tegmentum
Tomasz Adamusiak
NIFSTD:birnlex_1031
James Malone
MA:0000212
TAO:0001354
ZFA:0001354
Multi-tissue structure that is the ventral part of the midbrain and develops from the basal plate. The tegmentum is bordered rostrally by the synencephalon, dorsal thalamus and posterior tuberculum, ventrally by the hypothalamus, and dorsolaterally by the torus semicircularis; caudally the tegmentum is continuous with the medulla oblongata.[accessedResource: ZFA:0001354][accessDate: 04-11-2010]
FMAID:62393
Subdivision of the midbrain lying anterior to the tectum and posterior to the substantia nigra and cerebral peduncle.
MAT:0000452
Multi-tissue structure that is the ventral part of the midbrain and develops from the basal plate. The tegmentum is bordered rostrally by the synencephalon, dorsal thalamus and posterior tuberculum, ventrally by the hypothalamus, and dorsolaterally by the torus semicircularis; caudally the tegmentum is continuous with the medulla oblongata.
mesencephalic tegmentum[accessedResource: ZFA:0001354][accessDate: 04-11-2010]
Tegmentum of midbrain[accessedResource: FMAID:62393][accessDate: 04-11-2010]
A dorsal membrane of the embryo.[accessedResource: FBbt:00000095][accessDate: 04-11-2010]
James Malone
A dorsal membrane of the embryo.
amnioserosa
FBbt:00000095
Tomasz Adamusiak
pelvic fin
ZFA:0001184
James Malone
motor cortex
Adalat
4-(2'-Nitrophenyl)-2,6-dimethyl-1,4-dihydropyridin-3,5-dicarbonsaeuredimethylester
nifedipinum
A dihydropyridine that has formula C17H18N2O6.
C17H18N2O6
Coracten
Nifedipres
nifedipino
http://www.ebi.ac.uk/efo/EFO_0001578
Nifecard
CHEBI:7565
Procardia
COC(=O)C1=C(C)NC(C)=C(C1c1ccccc1[N+]([O-])=O)C(=O)OC
Adapine
nifedipine
dimethyl 2,6-dimethyl-4-(2-nitrophenyl)-1,4-dihydropyridine-3,5-dicarboxylate
Nifecor
InChIKey=HYIMSNHJOBLJNT-UHFFFAOYAE
InChI=1/C17H18N2O6/c1-9-13(16(20)24-3)15(14(10(2)18-9)17(21)25-4)11-7-5-6-8-12(11)19(22)23/h5-8,15,18H,1-4H3
James Malone
DNA/RNA extraction
The procedure used to obtain something from a mixture or compound by chemical or physical or mechanical means, e.g. DNA/RNA extraction
extraction protocol
Ele Holloway
James Malone
MC116
James Malone
decidua basalis
NCIt:C32426
James Malone
CS57871 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158895&type=germplasm
CS57871
http://www.arabidopsis.org/servlets/TairObject?id=1005158895&type=germplasm
Ele Holloway
James Malone
vegetative apex
InChI=1/C15H10O7/c16-7-4-10(19)12-11(5-7)22-15(14(21)13(12)20)6-1-2-8(17)9(18)3-6/h1-5,16-19,21H
2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-4H-chromen-4-one
quercetin
Oc1cc(O)c2c(c1)oc(-c1ccc(O)c(O)c1)c(O)c2=O
A pentahydroxyflavone having the five hydroxy groups placed at the 3-, 3'-, 4'-, 5- and 7-positions.
InChIKey=REFJWTPEDVJJIY-UHFFFAOYAW
3,5,7,3',4'-Pentahydroxyflavone
http://www.ebi.ac.uk/efo/EFO_0001600
C15H10O7
A pentahydroxyflavone that has formula C15H10O7.
CHEBI:16243
Tomasz Adamusiak
presumptive floor plate
ZFA:0001218
Parkinson's disease NOS (disorder)[accessedResource: DOID:14330][accessDate: 04-11-2010]
Tomasz Adamusiak
Parkinson's syndrome[accessedResource: NIFSTD:birnlex_2098][accessDate: 04-11-2010]
Parkinson's
Idiopathic PD[accessedResource: NIFSTD:birnlex_2098][accessDate: 04-11-2010]
NIFSTD:birnlex_2098
A neurodegenerative disease that results_from degeneration of the central nervous system that often impairs the sufferer's motor skills, speech, and other functions.[accessedResource: DOID:14330][accessDate: 04-11-2010]
paralysis agitans[accessedResource: DOID:14330][accessDate: 04-11-2010]
Parkinson syndrome
Parkinson syndrome[accessedResource: NIFSTD:birnlex_2098][accessDate: 04-11-2010]
Parkinsonian disorder[accessedResource: NIFSTD:birnlex_2098][accessDate: 04-11-2010]
Ele Holloway
Parkinson disease
paralysis agitans
Idiopathic PD
Parkinsonian disorder
Parkinson's disease (disorder)
Parkinson disease[accessedResource: NIFSTD:birnlex_2098][accessDate: 04-11-2010]
James Malone
A neurodegenerative disease that results_from degeneration of the central nervous system that often impairs the sufferer's motor skills, speech, and other functions.
Parkinson's disease
Parkinson's syndrome
Parkinson's disease NOS[accessedResource: DOID:14330][accessDate: 04-11-2010]
Parkinson's disease NOS
Parkinson's[accessedResource: NIFSTD:birnlex_2098][accessDate: 04-11-2010]
DOID:14330
Parkinson's disease NOS (disorder)
Parkinson's disease (disorder)[accessedResource: DOID:14330][accessDate: 04-11-2010]
Ele Holloway
James Malone
Tomasz Adamusiak
zymosan
CASRN:9010-72-4
DSSTox_Generic_SID:42540
InChIKey=ZPEIMTDSQAKGNT-UHFFFAOYAX
CHEBI:3647
clorpromazina
Thorazine
A substituted phenothiazine in which the ring nitrogen at position 10 is attached to C-3 of an N,N-dimethylpropanamine moiety.
Chlorderazin
Chloropromazine
chlorpromazine
James Malone
CN(C)CCCN1c2ccccc2Sc2ccc(Cl)cc12
CPZ
N-(3-dimethylaminopropyl)-3-chlorophenothiazine
Contomin
A phenothiazine that has formula C17H19ClN2S.
Largactil
Chlorpromados
http://www.ebi.ac.uk/efo/EFO_0001503
3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine
C17H19ClN2S
InChI=1/C17H19ClN2S/c1-19(2)10-5-11-20-14-6-3-4-7-16(14)21-17-9-8-13(18)12-15(17)20/h3-4,6-9,12H,5,10-11H2,1-2H3
3-(2-chlorophenothiazin-10-yl)-N,N-dimethyl-propan-1-amine
3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethyl-1-propanamine
chlorpromazinum
Aminazine
Ele Holloway
James Malone
D283Med
HTB-185
Clear Cell Adenocarcinoma of Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Renal Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Clear Cell Renal Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
conventional renal cell carcinoma
Clear Cell Carcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Adenocarcinoma of kidney
Carcinomas, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
conventional (Clear cell) renal cell carcinoma[accessedResource: DOID:4467][accessDate: 10-05-2010]
Renal Clear Cell Adenocarcinoma
1.8
Carcinoma, Nephroid
Clear Cell Adenocarcinoma of the Kidney
Hypernephromas
James Malone
Clear cell carcinoma of kidney (disorder)
Sarcomatoid Renal Cell Carcinoma
MSH:D002292
Clear Cell Adenocarcinoma of the Kidney[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Clear Cell Renal Cell Carcinoma
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.
Kidney Clear Cell Carcinoma
obsolete_conventional clear cell renal carcinoma
SNOMEDCT:254915003
Carcinoma, Renal Cell
GeneRIF:15709172
Clear cell carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Clear Cell Carcinoma of the Kidney
Conventional (Clear Cell) Renal Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Renal Cell Carcinomas
A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Adenocarcinoma, Renal Cell
Renal Cell Adenocarcinomas
A renal cell carcinoma that is the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.[accessedResource: DOID:4467][accessDate: 10-05-2010]
NCIt:C4033
Carcinoma of kidney
Sarcomatoid Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
duplicate of clear cell adenocarcinoma EFO_0000348
Nephroid Carcinomas
Clear Cell Adenocarcinoma of Kidney
Kidney Clear Cell Adenocarcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Clear Cell Adenocarcinoma, Kidney
Clear Cell Renal Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Hypernephroid Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Renal Cell Adenocarcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Kidney Clear Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Carcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
true
DOID:4467
Papillary Renal Cell Carcinoma
Clear cell carcinoma of kidney is a renal cell carcinoma described as the most common type of renal cell carcinoma. The cancerous cells appear very pale or clear when examined under microscope. This cancer can be effectively treated with surgery if the tumor is confined to the kidney.
Grawitz tumour[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Carcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Chromophobe Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Conventional Renal Cell Carcinoma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Grawitz tumour
Grawitz Tumor[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
conventional (Clear cell) renal cell carcinoma
Carcinomas, Collecting Duct (Kidney)
Hypernephroid Carcinomas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:12576453
Hypernephroid Carcinomas
Collecting Duct Carcinomas (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Papillary Renal Cell Carcinoma[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Clear cell carcinoma of kidney (disorder)[accessedResource: DOID:4467][accessDate: 10-05-2010]
Hypernephroma
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
Hypernephroma[accessedResource: NCIt:C4033][accessDate: 10-05-2010]
A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.
Conventional (Clear Cell) Renal Cell Adenocarcinoma
Hypernephroid Carcinoma
Chromophobe Renal Cell Carcinoma
Duct Carcinoma, Collecting (Kidney)[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Carcinomas, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Adenocarcinoma, Renal Cell[accessedResource: MSH:D002292][accessDate: 10-05-2010]
Adenocarcinoma of kidney[accessedResource: SNOMEDCT:254915003][accessDate: 10-05-2010]
Tumor, Grawitz
Renal Clear Cell Carcinoma
Carcinoma, Collecting Duct (Kidney)
GeneRIF:15062033
Carcinoma, Nephroid[accessedResource: MSH:D002292][accessDate: 10-05-2010]
GeneRIF:14550470
clear cell carcinoma of kidney
Hypernephromas[accessedResource: MSH:D002292][accessDate: 10-05-2010]
James Malone
CS57778 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158802&type=germplasm
CS57778
http://www.arabidopsis.org/servlets/TairObject?id=1005158802&type=germplasm
Ele Holloway
James Malone
C3H10T1/2
nerve cell[accessedResource: BTO:0000938][accessDate: 04-11-2010]
The basic cellular units of nervous tissue. Neurons are polarized cells with defined regions consisting of the cell body, an axon, and dendrites, although some types of neurons lack axons or dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.
neuronal cell[accessedResource: BTO:0000938][accessDate: 04-11-2010]
CL:0000540
A grayish or reddish granular cell with specialized processes that is the fundamental functional unit of nervous tissue.
neuron cell
NIFSTD:sao1417703748
neuronal cell
The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.
neuron cell[accessedResource: NIFSTD:sao1417703748][accessDate: 04-11-2010]
BTO:0000938
nerve cell
The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.[accessedResource: CL:0000540][accessDate: 04-11-2010]
A grayish or reddish granular cell with specialized processes that is the fundamental functional unit of nervous tissue.[accessedResource: BTO:0000938][accessDate: 04-11-2010]
Tomasz Adamusiak
James Malone
neuron
SK-N-MC
James Malone
Ele Holloway
HB-10
SKNMc
Ele Holloway
James Malone
hair follicle
EV:0100156
MA:0000154
James Malone
embryonic dorsal epidermis
FBbt:00005744
The proximal part of the limb (e.g. between shoulder and elbow)
The proximal part of the limb (e.g. between shoulder and elbow)[accessedResource: MAT:0000093][accessDate: 04-11-2010]
MAT:0000093
stylopod
MA:0002717
proximal part of limb[accessedResource: MAT:0000093][accessDate: 04-11-2010]
proximal part of limb
James Malone
essential tremor
Tomasz Adamusiak
Essential tremor (finding)[accessedResource: DOID:4990][accessDate: 04-11-2010]
Essential tremor (finding)
benign essential tremor (disorder) [Ambiguous]
benign essential tremor
benign essential tremor (disorder) [Ambiguous][accessedResource: DOID:4990][accessDate: 04-11-2010]
DOID:4990
benign essential tremor[accessedResource: DOID:4990][accessDate: 04-11-2010]
Tomasz Adamusiak
pharyngeal arch cartilage
ZFA:0001460
Tomasz Adamusiak
COLO205
MCC:0000107
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mating_type_a[accessedResource: MO_659][accessDate: 04-11-2010]
MO_659
a[accessedResource: PATO:0001341][accessDate: 04-11-2010]
A S. cerevisiae mating type cells that secrete a pheromone that in alpha haploids stimulates processes that lead to mating.
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#mating_type_a
James Malone
A S. cerevisiae mating type cells that secrete a pheromone that in alpha haploids stimulates processes that lead to mating.[accessedResource: PATO:0001341][accessDate: 04-11-2010]
a mating type (yeast)
a
mating type a
PATO:0001341
a mating type (yeast)[accessedResource: PATO:0001341][accessDate: 04-11-2010]
Ele Holloway
James Malone
NCI-H630
The rear end or a process or prolongation of the rear end of the body of an animal.
James Malone
Organism subdivision which is the part of the body posterior to the vent which includes the anal and caudal fins.
MFO:0081020
tail
Organism subdivision which is the part of the body posterior to the vent which includes the anal and caudal fins.[accessedResource: ZFA:0001117][accessDate: 04-11-2010]
BTO:0001348
EMAPA:16748
WBbt:0005741
post-vent region
post-vent region[accessedResource: ZFA:0001117][accessDate: 04-11-2010]
MA:0000008
The rear end or a process or prolongation of the rear end of the body of an animal.[accessedResource: BTO:0001348][accessDate: 04-11-2010]
SAEL:103
MAT:0000094
XAO:0003026
ZFA:0001117
James Malone
GM12006
NCIt:C14220
Human Immunodeficiency Virus, Type 1
Human Immunodeficiency Virus 1[accessedResource: NCIt:C14220][accessDate: 04-11-2010]
HIV-1 seropositive
The type species of lentivirus and the etiologic agent of acquired immunodeficiency syndrome (AIDS). It is characterized by its cytopathic effect and affinity for the T4-lymphocyte.[accessedResource: NCIt:C14220][accessDate: 04-11-2010]
The type species of lentivirus and the etiologic agent of acquired immunodeficiency syndrome (AIDS). It is characterized by its cytopathic effect and affinity for the T4-lymphocyte.
Human Immunodeficiency Virus 1
James Malone
Human Immunodeficiency Virus, Type 1[accessedResource: NCIt:C14220][accessDate: 04-11-2010]
HIV-1
An arbitrary classification of a taxonomic group that is a division of a species. It usually arises as a consequence of geographical isolation within a species and is characterized by shared heredity, physical attributes and behavior, and in the case of humans, by common history, nationality, or geographic distribution.
use EFO_0001799 instead
An arbitrary classification of a taxonomic group that is a division of a species. It usually arises as a consequence of geographical isolation within a species and is characterized by shared heredity, physical attributes and behavior, and in the case of humans, by common history, nationality, or geographic distribution.[accessedResource: NCIt:C17049][accessDate: 03-11-2010]
Racial Group[accessedResource: NCIt:C17049][accessDate: 03-11-2010]
A race is a popluation categorized on the basis of various sets of heritable characteristics.
Racial Group
true
obsolete_race
2.6.1
James Malone
NCIt:C17049
James Malone
The essential organ of hearing and equilibrium that is located in the temporal bone, is innervated by the auditory nerve, and includes the vestibule, the semicircular canals, and the cochlea.
MIAA:0000145
BTO:0000630
internal ear
The essential organ of hearing and equilibrium that is located in the temporal bone, is innervated by the auditory nerve, and includes the vestibule, the semicircular canals, and the cochlea.[accessedResource: BTO:0000630][accessDate: 04-11-2010]
internal ear[accessedResource: BTO:0000630][accessDate: 04-11-2010]
auris interna
inner ear structure
inner ear[accessedResource: BTO:0000630][accessDate: 04-11-2010]
auris interna[accessedResource: BTO:0000630][accessDate: 04-11-2010]
inner ear
Scott syndrome (disorder)[accessedResource: SNOMEDCT:128098009][accessDate: 04-11-2010]
James Malone
Scott syndrome
SNOMEDCT:128098009
Scott syndrome (disorder)
http://www.ebi.ac.uk/efo/EFO_0001807
ml/l
UO:0000207
A milliliter per liter is a unit of concentrationdefined as a volume per unit volume unit which is equal to one millionth of a liter of solute in one liter of solution.
A volume per unit volume unit which is equal to one millionth of a liter of solute in one liter of solution.
James Malone
milliliter per liter
true
Ele Holloway
James Malone
VH-64
James Malone
STRUCTURE_ChemicalName_IUPAC:(5Z)-7-{(1R,2R,3R,5S)-3,5-dihydroxy-2-[(3R)-3-hydroxy-5-phenylpentyl]cyclopentyl}hept-5-enoic acid
STRUCTURE_Formula:C23H34O5
Tomasz Adamusiak
latanprost free acid
DSSTox_CID:20531
DSSTox_Generic_SID:40531
Ele Holloway
CASRN:41639-83-2
Ele Holloway
James Malone
N231
Tomasz Adamusiak
egg
A female gamete where meiosis has progressed to metaphase II and is able to participate in fertilization.[accessedResource: CL:0000025][accessDate: 04-11-2010]
mature oocyte[accessedResource: CL:0000025][accessDate: 04-11-2010]
CL:0000025
ovum[accessedResource: MAT:0000213][accessDate: 04-11-2010]
A female gamete where meiosis has progressed to metaphase II and is able to participate in fertilization.
PO:0020094
OntologyMappingImporter following MAT:0000213
mature oocyte
James Malone
MAT:0000213
plant egg
ovum
egg[accessedResource: CL:0000025][accessDate: 04-11-2010]
Segment of neuraxis that has as its parts gray matter and white matter that surround the central canal. Examples: There is only one spinal cord.
James Malone
spinal cord
spinal cord structure
TAO:0000075
MFO:0002860
EV:0100316
The cord of nervous tissue that extends from the brain lengthwise along the back in the vertebral canal, gives off the pairs of spinal nerves, carries impulses to and from the brain, and serves as a center for initiating and coordinating many reflex acts.[accessedResource: BTO:0001279][accessDate: 04-11-2010]
ZFA:0000075
EHDAA:2863
SAEL:100
FMAID:7647
MA:0000216
XAO:0000020
EMAPA:17577
The cord of nervous tissue that extends from the brain lengthwise along the back in the vertebral canal, gives off the pairs of spinal nerves, carries impulses to and from the brain, and serves as a center for initiating and coordinating many reflex acts.
spinal cord structure[accessedResource: ZFA:0000075][accessDate: 04-11-2010]
BTO:0001279
MAT:0000183
Ele Holloway
James Malone
EB3
Ele Holloway
James Malone
B117P
A disease of the heart muscle or myocardium proper whose cause is unknown.[accessedResource: NCIt:C53654][accessDate: 04-11-2010]
James Malone
A disease of the heart muscle or myocardium proper whose cause is unknown.
idiopathic cardiomyopathy
NCIt:C53654
GeneRIF:12207967
GeneRIF:16100246
GeneRIF:15345651
GeneRIF:15262832
GeneRIF:15350969
GeneRIF:12923494
A hypoperfusion of the BLOOD through an organ or tissue caused by a PATHOLOGIC CONSTRICTION or obstruction of its BLOOD VESSELS, or an absence of BLOOD CIRCULATION.
GeneRIF:12232802
GeneRIF:12598732
GeneRIF:15117851
GeneRIF:14757696
GeneRIF:15001561
GeneRIF:15489954
GeneRIF:12897086
GeneRIF:12871572
GeneRIF:15147523
GeneRIF:15030400
GeneRIF:12707035
GeneRIF:16166266
GeneRIF:12352321
GeneRIF:15241185
GeneRIF:12600263
Ischaemia, NOS[accessedResource: SNOMEDCT:52674009][accessDate: 04-11-2010]
GeneRIF:15723986
GeneRIF:15309413
GeneRIF:16077081
GeneRIF:11822892
GeneRIF:15223375
GeneRIF:15173034
GeneRIF:12535945
GeneRIF:15752542
GeneRIF:16194580
Ischaemia[accessedResource: SNOMEDCT:52674009][accessDate: 04-11-2010]
GeneRIF:12657670
GeneRIF:14643014
GeneRIF:12860919
GeneRIF:12699784
GeneRIF:14983993
GeneRIF:15961228
GeneRIF:12437588
GeneRIF:14568904
GeneRIF:14507649
GeneRIF:15262323
GeneRIF:12368657
GeneRIF:14578604
Ischemias
GeneRIF:15050129
GeneRIF:12201360
GeneRIF:15829914
GeneRIF:12805025
GeneRIF:16155108
GeneRIF:14747752
GeneRIF:14502288
GeneRIF:15316036
GeneRIF:12746188
GeneRIF:12623065
GeneRIF:14583338
GeneRIF:12577622
GeneRIF:15239105
GeneRIF:12453540
GeneRIF:11934832
GeneRIF:15953587
GeneRIF:12088756
GeneRIF:15817274
GeneRIF:12529269
GeneRIF:15025939
GeneRIF:15309411
GeneRIF:12489796
GeneRIF:12210757
GeneRIF:14983226
GeneRIF:12165407
GeneRIF:15081307
GeneRIF:12593860
GeneRIF:15613744
GeneRIF:15502938
GeneRIF:15358037
GeneRIF:15339931
Ischemia (disorder)[accessedResource: DOID:326][accessDate: 04-11-2010]
GeneRIF:16055264
GeneRIF:14670843
GeneRIF:12130736
GeneRIF:15901600
GeneRIF:12947324
GeneRIF:15804717
GeneRIF:14730711
ischemia
GeneRIF:12145195
GeneRIF:11756680
GeneRIF:12716944
GeneRIF:12468103
GeneRIF:12766162
GeneRIF:14969349
GeneRIF:12208351
GeneRIF:15206826
GeneRIF:12883833
Ischaemia
GeneRIF:12730952
GeneRIF:12651615
Ischaemia, NOS
GeneRIF:16040592
GeneRIF:12540780
GeneRIF:11877468
GeneRIF:11854323
GeneRIF:15579510
GeneRIF:15284219
GeneRIF:15306252
GeneRIF:12144846
GeneRIF:12969257
Ischemia, NOS[accessedResource: SNOMEDCT:52674009][accessDate: 04-11-2010]
GeneRIF:15790561
GeneRIF:15575898
GeneRIF:12963035
GeneRIF:11801667
Ischemias[accessedResource: MSH:D007511][accessDate: 04-11-2010]
GeneRIF:15105298
GeneRIF:12538716
GeneRIF:15820254
GeneRIF:12887688
SNOMEDCT:52674009
GeneRIF:15818741
GeneRIF:15742404
GeneRIF:12595498
GeneRIF:15611365
GeneRIF:16052682
MSH:D007511
GeneRIF:16284105
GeneRIF:15687494
GeneRIF:15561908
GeneRIF:12709584
GeneRIF:15653094
GeneRIF:14732352
GeneRIF:15791006
GeneRIF:15601946
GeneRIF:15856211
GeneRIF:12782295
GeneRIF:12904478
GeneRIF:12714332
GeneRIF:12031986
GeneRIF:12598725
GeneRIF:12812761
GeneRIF:15612529
GeneRIF:15518712
GeneRIF:15017017
GeneRIF:15541008
James Malone
GeneRIF:12580450
GeneRIF:12975460
GeneRIF:14522822
GeneRIF:14871559
GeneRIF:15474357
GeneRIF:15851594
GeneRIF:14741413
GeneRIF:15078802
GeneRIF:12031847
Ischemia (disorder)
GeneRIF:12172377
GeneRIF:12528815
GeneRIF:15543936
GeneRIF:14615282
GeneRIF:11945023
GeneRIF:14500739
A hypoperfusion of the BLOOD through an organ or tissue caused by a PATHOLOGIC CONSTRICTION or obstruction of its BLOOD VESSELS, or an absence of BLOOD CIRCULATION.[accessedResource: MSH:D007511][accessDate: 04-11-2010]
GeneRIF:11919511
GeneRIF:12415119
GeneRIF:15994441
GeneRIF:12645009
GeneRIF:16115445
GeneRIF:15854743
GeneRIF:15548426
GeneRIF:14965033
GeneRIF:15316398
GeneRIF:15013953
GeneRIF:15845077
GeneRIF:12454802
DOID:326
GeneRIF:11837786
GeneRIF:12950452
GeneRIF:12076861
GeneRIF:12078512
GeneRIF:15362036
GeneRIF:12718435
GeneRIF:15512786
GeneRIF:15090052
GeneRIF:15729291
GeneRIF:12414116
GeneRIF:14599979
GeneRIF:15142843
Ischemia, NOS
GeneRIF:15837573
GeneRIF:12672549
GeneRIF:15734859
GeneRIF:15358666
GeneRIF:15181368
GeneRIF:12849738
GeneRIF:14753415
GeneRIF:15207275
GeneRIF:15867174
GeneRIF:16095866
GeneRIF:15380477
GeneRIF:12126535
GeneRIF:12753927
GeneRIF:12736150
GeneRIF:16127466
GeneRIF:15059967
GeneRIF:12384456
GeneRIF:12490603
GeneRIF:12099359
GeneRIF:12813366
GeneRIF:15637314
GeneRIF:15778274
A locally aggressive malignant neoplasm composed of mature adipocytes showing cell size variation and nuclear atypia. It is often associated with the presence of hyperchromatic multinucleated stromal cells, and varying numbers of lipoblasts. There are three histologic subtypes, sclerosing, inflammatory, and spindle cell liposarcoma. These tumors do not usually metastasize unless they undergo dedifferentiation.[accessedResource: NCIt:C4250][accessDate: 04-11-2010]
James Malone
Tomasz Adamusiak
A locally aggressive malignant neoplasm composed of mature adipocytes showing cell size variation and nuclear atypia. It is often associated with the presence of hyperchromatic multinucleated stromal cells, and varying numbers of lipoblasts. There are three histologic subtypes, sclerosing, inflammatory, and spindle cell liposarcoma. These tumors do not usually metastasize unless they undergo dedifferentiation.
well-differentiated liposarcoma
NCIt:C4250
reproductive system - animals
genital system[accessedResource: MAT:0000305][accessDate: 04-11-2010]
EMAPA:17381
TAO:0000632
SAEL:89
FBbt:00004857
EHDAA:5923
EV:0100100
reproductive system[accessedResource: FBbt:00004857][accessDate: 04-11-2010]
reproductive system - animals[accessedResource: MAT:0000305][accessDate: 04-11-2010]
XAO:0000142
FMAID:7160
James Malone
reproductive system
animal reproductive system
MAT:0000305
genital system
nanomole
A nanomole is a substance unit equal to one thousandth of one millionth of a mole or 10^-9 mol.
true
Tomasz Adamusiak
James Malone
nmol
http://www.ebi.ac.uk/efo/EFO_0001800
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#nmol[accessedResource: MO_743][accessDate: 04-11-2010]
A substance unit equal to one thousandth of one millionth of a mole or 10^[-9] mol.
MO_743
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#nmol
Jie Zheng
Tomasz Adamusiak
cibarium primordium
FBbt:00017019
Tomasz Adamusiak
SKNSH
MCC:0000430
SK-N-SH
GeneRIF:12702875
GeneRIF:12645087
Alzheimer Type Dementia[accessedResource: MSH:D000544][accessDate: 04-11-2010]
A dementia which is an incurable disease of unknown cause, starting in late middle age or in old age, that results in progressive memory loss, impaired thinking, disorientation, and changes in personality and mood, that leads in advanced cases to a profound decline in cognitive and physical functioning, and that is marked histologically by the degeneration of brain neurons especially in the cerebral cortex and by the presence of neurofibrillary tangles and plaques containing beta-amyloid.
GeneRIF:12499840
GeneRIF:12362316
GeneRIF:15024728
GeneRIF:15082191
GeneRIF:15954227
GeneRIF:15331147
GeneRIF:16000144
ALZHEIMERS DIS[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:14675603
GeneRIF:12133495
GeneRIF:15060098
GeneRIF:15203119
NIFSTD:birnlex_2092
[X]Dementia in Alzheimer's disease, unspecified
GeneRIF:15263903
GeneRIF:12565129
GeneRIF:12147333
GeneRIF:15337312
GeneRIF:16082716
GeneRIF:15546861
A progressive, neurodegenerative disease characterized by loss of function and death of nerve cells in several areas of the brain leading to loss of cognitive function such as memory and language.
GeneRIF:12084708
GeneRIF:15722183
GeneRIF:15728175
SNOMEDCT:26929004
GeneRIF:15313836
GeneRIF:12527400
GeneRIF:15048650
A dementia which is an incurable disease of unknown cause, starting in late middle age or in old age, that results in progressive memory loss, impaired thinking, disorientation, and changes in personality and mood, that leads in advanced cases to a profound decline in cognitive and physical functioning, and that is marked histologically by the degeneration of brain neurons especially in the cerebral cortex and by the presence of neurofibrillary tangles and plaques containing beta-amyloid.[accessedResource: DOID:10652][accessDate: 04-11-2010]
GeneRIF:11826038
Alzheimer Type Senile Dementia
GeneRIF:12614671
GeneRIF:12770691
GeneRIF:12459318
Alzheimer's disease
GeneRIF:14521990
GeneRIF:11847218
GeneRIF:15557325
GeneRIF:15621017
GeneRIF:14739533
GeneRIF:15193429
GeneRIF:15147516
MSH:D000544
Dementia, Alzheimer Type
GeneRIF:12175481
GeneRIF:15882808
GeneRIF:14739535
AD - Alzheimer's disease
GeneRIF:12422374
GeneRIF:12074831
Dementia in Alzheimer's disease (disorder)
GeneRIF:16179263
GeneRIF:14701757
GeneRIF:11971084
GeneRIF:11771746
GeneRIF:15759131
GeneRIF:15050722
GeneRIF:11278808
GeneRIF:12192622
GeneRIF:12098640
Alzheimer's disease, NOS
GeneRIF:15451372
GeneRIF:15342129
GeneRIF:15068237
GeneRIF:12514700
GeneRIF:15530656
A progressive, neurodegenerative disease characterized by loss of function and death of nerve cells in several areas of the brain leading to loss of cognitive function such as memory and language.[accessedResource: NCIt:C2866][accessDate: 04-11-2010]
GeneRIF:12505619
GeneRIF:12200623
GeneRIF:12528817
GeneRIF:15091317
GeneRIF:15358178
GeneRIF:12826738
GeneRIF:12807963
GeneRIF:15056725
GeneRIF:12727335
GeneRIF:11940690
GeneRIF:15172102
GeneRIF:15106847
GeneRIF:14646594
GeneRIF:12614934
GeneRIF:15059642
Presenile Dementias
Presenile Dementia
GeneRIF:12694406
Dementia in Alzheimer's disease (disorder)[accessedResource: DOID:10652][accessDate: 04-11-2010]
GeneRIF:12876265
GeneRIF:12489797
GeneRIF:14991457
FOCAL ONSET ALZHEIMERS DIS
GeneRIF:14985339
GeneRIF:12480756
GeneRIF:15708435
GeneRIF:14572447
GeneRIF:15745979
Dementia in Alzheimer's disease[accessedResource: SNOMEDCT:192160005][accessDate: 04-11-2010]
GeneRIF:12070657
GeneRIF:12226093
GeneRIF:12417381
GeneRIF:15034937
GeneRIF:15804423
GeneRIF:11905990
GeneRIF:12565837
[X]Dementia in Alzheimer's disease
GeneRIF:12508915
GeneRIF:12111806
GeneRIF:12641733
GeneRIF:15823754
Acute Confusional Senile Dementia
AD[accessedResource: DOID:10652][accessDate: 04-11-2010]
GeneRIF:15755860
GeneRIF:15075440
GeneRIF:12692477
GeneRIF:12445809
Alzheimer's disease (disorder)[accessedResource: SNOMEDCT:26929004][accessDate: 04-11-2010]
GeneRIF:12707936
GeneRIF:15452128
GeneRIF:12149413
GeneRIF:12499843
GeneRIF:12876480
[X]Dementia in Alzheimer's disease[accessedResource: SNOMEDCT:192160005][accessDate: 04-11-2010]
DAT - Dementia Alzheimer's type[accessedResource: SNOMEDCT:192160005][accessDate: 04-11-2010]
GeneRIF:16079207
GeneRIF:12107813
GeneRIF:12600716
GeneRIF:13678670
GeneRIF:15070964
AD - Alzheimer's disease[accessedResource: SNOMEDCT:26929004][accessDate: 04-11-2010]
Dementia, Presenile Alzheimer[accessedResource: MSH:D000544][accessDate: 04-11-2010]
Senile Dementia, Acute Confusional[accessedResource: MSH:D000544][accessDate: 04-11-2010]
Alzheimer Type Senile Dementia[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:12555245
Alzheimers disease
AD
GeneRIF:12882323
Dementia of the Alzheimer's type
GeneRIF:15699049
GeneRIF:15944016
GeneRIF:15665036
Alzheimer Disease
GeneRIF:12796468
Alzheimer's disease (disorder)
Alzheimer's Dementia
Alzheimers disease[accessedResource: NIFSTD:birnlex_2092][accessDate: 04-11-2010]
GeneRIF:12816543
GeneRIF:12459519
GeneRIF:11840502
GeneRIF:16101387
GeneRIF:15087549
GeneRIF:14739536
GeneRIF:15956169
GeneRIF:14523627
Alzheimer Senile Dementia
GeneRIF:15175114
Presenile Alzheimer Dementia
Presenile Dementias[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:14639046
GeneRIF:15456940
Dementia in Alzheimer's disease, unspecified (disorder)
GeneRIF:14663182
GeneRIF:15155565
GeneRIF:12117364
GeneRIF:12438920
GeneRIF:14999081
GeneRIF:11920850
GeneRIF:15893372
GeneRIF:14765129
James Malone
GeneRIF:16111477
GeneRIF:16258844
GeneRIF:15111312
GeneRIF:16027741
EARLY ONSET ALZHEIMER DIS
GeneRIF:15207261
GeneRIF:15184629
GeneRIF:12893422
GeneRIF:11992568
Alzheimer Dementia[accessedResource: NIFSTD:birnlex_2092][accessDate: 04-11-2010]
GeneRIF:15255950
GeneRIF:12928512
GeneRIF:15837559
GeneRIF:12223024
Dementia in Alzheimer's disease, unspecified (disorder)[accessedResource: DOID:10652][accessDate: 04-11-2010]
A degenerative disease of the BRAIN characterized by the insidious onset of DEMENTIA. Impairment of MEMORY, judgment, attention span, and problem solving skills are followed by severe APRAXIAS and a global loss of cognitive abilities. The condition primarily occurs after age 60, and is marked pathologically by severe cortical atrophy and the triad of SENILE PLAQUES; NEUROFIBRILLARY TANGLES; and NEUROPIL THREADS. (From Adams et al., Principles of Neurology, 6th ed, pp1049-57)
GeneRIF:12551918
GeneRIF:14515137
Dementia, Primary Senile Degenerative[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:14625044
GeneRIF:15313842
GeneRIF:12177374
GeneRIF:12112088
GeneRIF:15034766
GeneRIF:11798857
GeneRIF:12873803
GeneRIF:15068244
LATE ONSET ALZHEIMER DIS
GeneRIF:15555766
GeneRIF:11939591
GeneRIF:12732730
GeneRIF:12242547
GeneRIF:15236409
GeneRIF:12960780
SNOMEDCT:192164001
SNOMEDCT:192160005
GeneRIF:15577914
GeneRIF:15167696
GeneRIF:16174740
GeneRIF:14519527
GeneRIF:15464268
GeneRIF:16150694
GeneRIF:14761950
GeneRIF:16098202
GeneRIF:12145324
GeneRIF:12499050
GeneRIF:12824768
GeneRIF:15178951
GeneRIF:12566926
GeneRIF:12142731
GeneRIF:12707937
GeneRIF:15375590
GeneRIF:15365176
GeneRIF:12972157
GeneRIF:15732116
GeneRIF:15364413
GeneRIF:16130099
GeneRIF:15068254
GeneRIF:15123740
GeneRIF:11837744
Alzheimer's Dementia[accessedResource: NIFSTD:birnlex_2092][accessDate: 04-11-2010]
GeneRIF:14688411
GeneRIF:12080182
GeneRIF:15804918
GeneRIF:14523088
GeneRIF:12939405
GeneRIF:11771751
GeneRIF:15094456
GeneRIF:15026113
GeneRIF:15802910
GeneRIF:12480753
GeneRIF:12200143
GeneRIF:12787059
GeneRIF:15522224
GeneRIF:12221172
GeneRIF:15485486
GeneRIF:12509811
GeneRIF:12151789
GeneRIF:9701251
GeneRIF:12068009
GeneRIF:15975076
GeneRIF:11841602
GeneRIF:12707938
GeneRIF:16106215
[X]Dementia in Alzheimer's disease (disorder)[accessedResource: SNOMEDCT:192160005][accessDate: 04-11-2010]
GeneRIF:12600718
GeneRIF:15182943
GeneRIF:11927634
GeneRIF:15356202
GeneRIF:11897170
GeneRIF:11848684
GeneRIF:12116197
GeneRIF:15635706
GeneRIF:15770150
GeneRIF:15931081
GeneRIF:14722078
GeneRIF:12368187
GeneRIF:12914969
GeneRIF:15181247
GeneRIF:15255951
GeneRIF:15465084
GeneRIF:12387451
Alzheimer's Disease Pathway[accessedResource: NCIt:C38778][accessDate: 04-11-2010]
GeneRIF:12815750
GeneRIF:12890766
GeneRIF:11592857
GeneRIF:12759460
GeneRIF:15152345
GeneRIF:12460603
GeneRIF:12895443
GeneRIF:12480749
GeneRIF:15212839
GeneRIF:12486154
GeneRIF:14657172
GeneRIF:12891359
GeneRIF:11831556
GeneRIF:11771749
GeneRIF:12742739
GeneRIF:11552008
GeneRIF:15192701
GeneRIF:15708437
DAT - Dementia Alzheimer's type
GeneRIF:15813938
GeneRIF:15277615
GeneRIF:12435432
GeneRIF:11927360
GeneRIF:15953364
Alzheimer Senile Dementia[accessedResource: NIFSTD:birnlex_2092][accessDate: 04-11-2010]
GeneRIF:14746899
Alzheimer Disease, Late Onset
GeneRIF:16102903
GeneRIF:12859671
GeneRIF:14651959
GeneRIF:15082170
GeneRIF:11936240
[X]Dementia in Alzheimer's disease (disorder)
GeneRIF:12232784
GeneRIF:15899246
GeneRIF:15585340
GeneRIF:11756426
GeneRIF:15016430
GeneRIF:12604387
Dementia in Alzheimer's disease
GeneRIF:12650976
GeneRIF:11837743
Alzheimer's[accessedResource: NIFSTD:birnlex_2092][accessDate: 04-11-2010]
Alzheimer's disease, NOS[accessedResource: SNOMEDCT:26929004][accessDate: 04-11-2010]
NCIt:C2866
GeneRIF:15211644
GeneRIF:16226260
Early Onset Alzheimer Disease[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:12408226
GeneRIF:15014128
GeneRIF:12497631
Alzheimers Dementia
Alzheimer Dementia
GeneRIF:12876460
Focal Onset Alzheimer's Disease[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:15106853
GeneRIF:14519529
GeneRIF:12740599
GeneRIF:15860461
Alzheimer Disease, Early Onset
Late Onset Alzheimer Disease[accessedResource: MSH:D000544][accessDate: 04-11-2010]
Dementia of the Alzheimer's type[accessedResource: DOID:10652][accessDate: 04-11-2010]
GeneRIF:12809550
GeneRIF:12925530
GeneRIF:11849768
GeneRIF:12770689
GeneRIF:16116115
GeneRIF:15596614
GeneRIF:12888622
GeneRIF:15355315
EARLY ONSET ALZHEIMER DIS[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:12605101
GeneRIF:12928051
GeneRIF:15975077
GeneRIF:15084795
GeneRIF:12600719
GeneRIF:12928053
[X]Dementia in Alzheimer's disease, unspecified (disorder)[accessedResource: SNOMEDCT:192164001][accessDate: 04-11-2010]
A degenerative disease of the BRAIN characterized by the insidious onset of DEMENTIA. Impairment of MEMORY, judgment, attention span, and problem solving skills are followed by severe APRAXIAS and a global loss of cognitive abilities. The condition primarily occurs after age 60, and is marked pathologically by severe cortical atrophy and the triad of SENILE PLAQUES; NEUROFIBRILLARY TANGLES; and NEUROPIL THREADS. (From Adams et al., Principles of Neurology, 6th ed, pp1049-57)[accessedResource: MSH:D000544][accessDate: 04-11-2010]
Alzheimers
GeneRIF:15106838
GeneRIF:12109594
GeneRIF:12009501
GeneRIF:11831025
GeneRIF:15509549
Senile Dementia
GeneRIF:16231093
GeneRIF:12807433
Focal Onset Alzheimer's Disease
GeneRIF:12270958
ICD9:331.0
GeneRIF:16002400
[X]Dementia in Alzheimer's disease, unspecified (disorder)
GeneRIF:12531514
GeneRIF:15144856
GeneRIF:12408231
GeneRIF:15452311
GeneRIF:14757935
ALZHEIMER DIS
GeneRIF:12824062
Alzheimer disease[accessedResource: SNOMEDCT:26929004][accessDate: 04-11-2010]
GeneRIF:12483461
GeneRIF:15917098
GeneRIF:12160938
ALZHEIMERS DIS
GeneRIF:14614898
GeneRIF:12401548
GeneRIF:12626500
GeneRIF:11852060
GeneRIF:12497622
ALZHEIMER DIS[accessedResource: MSH:D000544][accessDate: 04-11-2010]
Dementias, Senile[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:12025816
GeneRIF:15115757
DOID:10652
GeneRIF:12969266
GeneRIF:15210531
GeneRIF:15053964
GeneRIF:15567486
GeneRIF:12032152
GeneRIF:16286548
GeneRIF:12127670
GeneRIF:12535780
GeneRIF:11771745
ALZHEIMER DIS LATE ONSET[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:12218659
GeneRIF:15610181
GeneRIF:15024730
GeneRIF:12417379
GeneRIF:12111440
GeneRIF:15601849
Alzheimer's Disease Pathway
Alzheimers Dementia[accessedResource: DOID:10652][accessDate: 04-11-2010]
NCIt:C38778
Dementia, Primary Senile Degenerative
[X]Dementia in Alzheimer's disease, unspecified[accessedResource: SNOMEDCT:192164001][accessDate: 04-11-2010]
GeneRIF:14637088
Dementia, Presenile[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:15776278
Dementia, Senile[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:14708344
GeneRIF:16023140
GeneRIF:16098915
GeneRIF:15026168
GeneRIF:14991845
GeneRIF:16181410
GeneRIF:12697290
GeneRIF:12609057
GeneRIF:14978286
GeneRIF:12112084
Senile Dementias
GeneRIF:15967987
GeneRIF:15453269
GeneRIF:14717705
GeneRIF:15781969
GeneRIF:12600202
GeneRIF:15228592
GeneRIF:12627474
GeneRIF:15338333
GeneRIF:15030408
GeneRIF:15193763
GeneRIF:15716413
GeneRIF:15737439
GeneRIF:15370375
GeneRIF:15860464
GeneRIF:12023056
Tomasz Adamusiak
GeneRIF:12928052
GeneRIF:16116430
GeneRIF:14661818
FOCAL ONSET ALZHEIMERS DIS[accessedResource: MSH:D000544][accessDate: 04-11-2010]
GeneRIF:12509807
GeneRIF:15013567
A property of a cell which is able to differentiate into into one or more differentiated cell types
pluripotent
Tomasz Adamusiak
presumptive shield
ZFA:0001121
James Malone
HCC366
http://www.ebi.ac.uk/efo/EFO_0001466
diclondazolic acid
lonidamine
OC(=O)c1nn(Cc2ccc(Cl)cc2Cl)c2ccccc12
An indazole that has formula C15H10Cl2N2O2.
DICA
1-(2,4-dichlorbenzyl)-indazole-3-carboxylic acid
lonidamina
lonidaminum
1-(2,4-dichlorobenzyl)-1H-indazole-3-carboxylic acid
C15H10Cl2N2O2
Lonidamin
InChIKey=WDRYRZXSPDWGEB-UYBDAZJACL
InChI=1/C15H10Cl2N2O2/c16-10-6-5-9(12(17)7-10)8-19-13-4-2-1-3-11(13)14(18-19)15(20)21/h1-7H,8H2,(H,20,21)/f/h20H
CHEBI:50138
Doridamina
Hodgkin's disease NOS[accessedResource: DOID:8567][accessDate: 04-11-2010]
Malignant Lymphogranulomas[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's disease NOS of lymph nodes of inguinal region and lower limb (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:15526025
stage I Subdiaphragmatic Hodgkin Lymphoma
GeneRIF:12824192
Hodgkin sarcoma [obs][accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's sarcoma[accessedResource: ICD9:201.2][accessDate: 04-11-2010]
Splenic Hodgkins Lymphoma
HL[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease, unspecified type, involving lymph nodes of inguinal region and lower limb
Hodgkin lymphoma, no ICD-O subtype (morphologic abnormality)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's sarcoma NOS (disorder)
Hodgkin's disease of lymph nodes of inguinal region AND/OR lower limb (disorder)
GeneRIF:12429802
DOID:8567
GeneRIF:11839577
lymphogranulomatosis[accessedResource: DOID:8567][accessDate: 04-11-2010]
Granuloma, Hodgkin
Hodgkin's Lymphoma stage III
A malignant disease characterized by progressive enlargement of the lymph nodes, spleen, and general lymphoid tissue. In the classical variant, giant usually multinucleate Hodgkin's and REED-STERNBERG CELLS are present; in the nodular lymphocyte predominant variant, lymphocytic and histiocytic cells are seen.[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's disease of spleen (disorder)
GeneRIF:15105810
HODGKINS DIS[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's sarcoma
GeneRIF:11830502
stage II Subdiaphragmatic Hodgkin Lymphoma
Hodgkin's disease, unspecified type, involving intrapelvic lymph nodes
Granuloma, Malignant
Hodgkin's disease (disorder)
Lymphogranuloma, malignant (morphologic abnormality)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS of lymph nodes of inguinal region and lower limb (disorder)
GeneRIF:15712176
Hodgkin's disease NOS (& [lymphogranuloma malignant])[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:12145210
Hodgkin sarcoma [obs]
GeneRIF:15120936
Hodgkin's disease, unspecified type, involving intrathoracic lymph nodes[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS of lymph nodes of head, face and neck (disorder)
Hodgkin's disease of lymph nodes of head, face and/or neck (disorder)
Granuloma, Hodgkin[accessedResource: MSH:D006689][accessDate: 04-11-2010]
HODGKIN DIS[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's disease NOS of intrathoracic lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Disease, Hodgkin's[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin Lymphoma[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's disease (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:15772702
GeneRIF:12011765
Hodgkin's Lymphomas[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's disease of lymph nodes of axilla and/or upper limb (disorder)
Hodgkins lymphoma
Hodgkin's disease, unspecified type, involving lymph nodes of multiple sites[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease, unspecified type, involving lymph nodes of multiple sites
Hodgkin's disease, unspecified type, involving intrathoracic lymph nodes
Hodgkin's disease NOS of lymph nodes of axilla and upper limb (disorder)
Hodgkin's Lymphomas
ICD9:201.9
Malignant Granulomas[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's disease of intrapelvic lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:15585627
GeneRIF:15933052
stage I Subdiaphragmatic Hodgkin Lymphoma[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS (morphologic abnormality)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease, unspecified type[accessedResource: ICD9:201.9][accessDate: 04-11-2010]
GeneRIF:12456498
Lymphogranuloma, Malignant
stage II Subdiaphragmatic Hodgkin Lymphoma[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:12070005
Hodgkin's disease NOS of lymph nodes of multiple sites (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS of intrapelvic lymph nodes (disorder)
GeneRIF:14654080
Hodgkin's disease, unspecified type, involving lymph nodes of axilla and upper limb
GeneRIF:12431239
Splenic Hodgkins Lymphoma[accessedResource: DOID:8567][accessDate: 04-11-2010]
Malignant Granulomas
Hodgkin's Lymphoma stage III[accessedResource: DOID:8567][accessDate: 04-11-2010]
Malignant Lymphogranulomas
ICD9:201.2
Hodgkin's disease, unspecified type, involving intrapelvic lymph nodes[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease of spleen (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS of intra-abdominal lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
James Malone
GeneRIF:12393409
GeneRIF:15556690
Hodgkin's disease NOS of intrathoracic lymph nodes (disorder)
ICD9:201
GeneRIF:11855781
GeneRIF:15551733
Hodgkin's disease NOS (& [lymphogranuloma malignant])
Hodgkin's disease NOS, unspecified site (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:14959851
Hodgkin's sarcoma of unspecified site (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:15912144
Diseases, Hodgkins[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's disease NOS (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease of lymph nodes of multiple sites (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS, unspecified site (disorder)
Hodgkin's disease of intrathoracic lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease, unspecified type, involving intra-abdominal lymph nodes
GeneRIF:12038453
Hodgkin's lymphoma NOS
GeneRIF:14962256
Hodgkin's sarcoma (disorder)
Hodgkin's disease, unspecified type, unspecified site, extranodal and solid organ sites
Hodgkin's disease, unspecified type, involving spleen[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS of lymph nodes of axilla and upper limb (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:12594824
GeneRIF:14645011
GeneRIF:11986952
GeneRIF:11956621
Hodgkin's disease of intra-abdominal lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's Granuloma[accessedResource: MSH:D006689][accessDate: 04-11-2010]
GeneRIF:15638381
GeneRIF:16123212
Hodgkin's sarcoma of unspecified site (disorder)
lymphogranulomatosis
Hodgkin's disease, unspecified type, involving lymph nodes of head, face and neck[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:12875982
GeneRIF:14959852
Hodgkin's lymphoma
GeneRIF:11929801
Hodgkin's disease, unspecified type, involving lymph nodes of axilla and upper limb[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin disease[accessedResource: DOID:8567][accessDate: 04-11-2010]
Malignant Lymphogranuloma[accessedResource: MSH:D006689][accessDate: 04-11-2010]
GeneRIF:12091121
Hodgkins Diseases
GeneRIF:12174874
Lymphoma, Hodgkin's[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's disease of intrapelvic lymph nodes (disorder)
Hodgkin's disease, unspecified type
Hodgkin's disease of lymph nodes of multiple sites (disorder)
Hodgkin's disease, unspecified type, involving lymph nodes of inguinal region and lower limb[accessedResource: DOID:8567][accessDate: 04-11-2010]
A malignant disease characterized by progressive enlargement of the lymph nodes, spleen, and general lymphoid tissue. In the classical variant, giant usually multinucleate Hodgkin's and REED-STERNBERG CELLS are present; in the nodular lymphocyte predominant variant, lymphocytic and histiocytic cells are seen.
GeneRIF:16108827
GeneRIF:12389614
Hodgkin's disease NOS (morphologic abnormality)
Granuloma, Hodgkin's
Hodgkin's disease NOS of lymph nodes of multiple sites (disorder)
GeneRIF:12152987
GeneRIF:12609061
MSH:D006689
Hodgkin's sarcoma NOS (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Lymphogranuloma, malignant (morphologic abnormality)
GeneRIF:15291355
GeneRIF:15796964
Hodgkin's disease, unspecified type, involving spleen
Hodgkin's disease NOS of intrapelvic lymph nodes (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Disease, Hodgkin
Hodgkin's disease of intra-abdominal lymph nodes (disorder)
Hodgkin's disease of lymph nodes of head, face AND/OR neck (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:12478664
Hodgkin's disease NOS (disorder)
GeneRIF:12389626
Hodgkin's disease NOS
HODGKINS DIS
Hodgkin's disease, unspecified type, involving intra-abdominal lymph nodes[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease of lymph nodes of inguinal region and/or lower limb (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease, unspecified type, involving lymph nodes of head, face, and neck
Hodgkin's disease of lymph nodes of axilla AND/OR upper limb (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease of intrathoracic lymph nodes (disorder)
Hodgkin's sarcoma (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS of spleen (disorder)
Hodgkin's disease NOS of spleen (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's disease NOS of lymph nodes of head, face and neck (disorder)[accessedResource: DOID:8567][accessDate: 04-11-2010]
GeneRIF:15026356
Hodgkin lymphoma, no ICD-O subtype (morphologic abnormality)
GeneRIF:11839668
Hodgkin's lymphoma NOS[accessedResource: DOID:8567][accessDate: 04-11-2010]
Hodgkin's Disease
HODGKIN DIS
Malignant Granuloma[accessedResource: MSH:D006689][accessDate: 04-11-2010]
Hodgkin's disease NOS of intra-abdominal lymph nodes (disorder)
GeneRIF:14961078
GeneRIF:12969974
Hodgkin Lymphoma
Hodgkin's disease, unspecified type, unspecified site, extranodal and solid organ sites[accessedResource: DOID:8567][accessDate: 04-11-2010]
HL
rat cell line
A sweet liquid that is secreted by the nectaries of a plant and is the chief raw material of honey.[accessedResource: BTO:0000537][accessDate: 04-11-2010]
James Malone
A sweet liquid that is secreted by the nectaries of a plant and is the chief raw material of honey.
nectar
BTO:0000537
MAT:0000349
An assay in which an array is used detect polymorphisms in DNA samples
genotyping by array
Tomasz Adamusiak
subopercle
ZFA:0000284
DSSTox_Generic_SID:C22H25N3O8
Ele Holloway
CASRN:171205-17-7
James Malone
DSSTox_CID:42623
STRUCTURE_Formula:2-(4-methylpiperazin-1-yl)quinoline di[(2Z)-but-2-enedioate]
Tomasz Adamusiak
N-methylquipazine dimaleate
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#clinical_treatment[accessedResource: MO_384][accessDate: 04-11-2010]
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#clinical_treatment
James Malone
radiotherapy
The current clinical treatment(s) of the patient from which the biosource is derived. E.g. radiotherapy
clinical treatment
MO_384
Jie Zheng
Tomasz Adamusiak
P-nitrotoluene
99-99-0
Disorder of joint of spine[accessedResource: SNOMEDCT:372109003][accessDate: 04-11-2010]
SNOMEDCT:372109003
JOINT DIS NOS-OTH JT[accessedResource: ICD9:719.98][accessDate: 04-11-2010]
OA - Osteoarthritis of spine[accessedResource: SNOMEDCT:8847002][accessDate: 04-11-2010]
JOINT DIS NOS-OTH JT
OA - Osteoarthritis of the spine[accessedResource: SNOMEDCT:8847002][accessDate: 04-11-2010]
GeneRIF:15146432
Spondylosis (disorder)[accessedResource: SNOMEDCT:8847002][accessDate: 04-11-2010]
Disorder of joint of spine
Osteoarthritis of spine
Spondyloarthropathy (disorder)[accessedResource: SNOMEDCT:372109003][accessDate: 04-11-2010]
Spondylarthropathies
Spondarthropathy[accessedResource: DOID:1123][accessDate: 04-11-2010]
Heterogeneous group of arthritic diseases sharing clinical and radiologic features. They are associated with the HLA-B27 ANTIGEN and some with a triggering infection. Most involve the axial joints in the SPINE, particularly the SACROILIAC JOINT, but can also involve asymmetric peripheral joints. Subsets include ANKYLOSING SPONDYLITIS; REACTIVE ARTHRITIS; PSORIATIC ARTHRITIS; and others.
Unspecified joint disorder of other specified sites
James Malone
Spondylosis, NOS
Spondylosis of unspecified site without mention of myelopathy
ICD9:721.90
GeneRIF:14558097
Heterogeneous group of arthritic diseases sharing clinical and radiologic features. They are associated with the HLA-B27 ANTIGEN and some with a triggering infection. Most involve the axial joints in the SPINE, particularly the SACROILIAC JOINT, but can also involve asymmetric peripheral joints. Subsets include ANKYLOSING SPONDYLITIS; REACTIVE ARTHRITIS; PSORIATIC ARTHRITIS; and others.[accessedResource: MSH:D025242][accessDate: 04-11-2010]
OA - Osteoarthritis of spine
Unspecified joint disorder of other specified sites[accessedResource: ICD9:719.98][accessDate: 04-11-2010]
spondyloarthropathy
DOID:1123
Spondylosis, NOS[accessedResource: SNOMEDCT:8847002][accessDate: 04-11-2010]
Spondylarthrosis NOS
Spondyloarthropathy (disorder)
Disorder of joint of spine (disorder)
Spondylarthrosis
Spondylarthropathies[accessedResource: MSH:D025242][accessDate: 04-11-2010]
Disorder of joint of spine (disorder)[accessedResource: SNOMEDCT:372109003][accessDate: 04-11-2010]
OA - Osteoarthritis of the spine
Spondylarthropathy[accessedResource: MSH:D025242][accessDate: 04-11-2010]
SNOMEDCT:8847002
GeneRIF:12115249
Spondylosis of unspecified site without mention of myelopathy[accessedResource: ICD9:721.90][accessDate: 04-11-2010]
Spondylosis
MSH:D025242
Spondylosis (disorder)
SPONDYLOS NOS W/O MYELOP
Spondylarthropathy
Spondylarthrosis, NOS[accessedResource: SNOMEDCT:8847002][accessDate: 04-11-2010]
Spondarthropathy
Osteoarthritis of spine[accessedResource: SNOMEDCT:8847002][accessDate: 04-11-2010]
Spondylosis[accessedResource: SNOMEDCT:8847002][accessDate: 04-11-2010]
ICD9:719.98
SPONDYLOS NOS W/O MYELOP[accessedResource: ICD9:721.90][accessDate: 04-11-2010]
Spondylarthrosis[accessedResource: SNOMEDCT:8847002][accessDate: 04-11-2010]
James Malone
CS57896 is an Arabidopsis thaliana strain as described in TAIR http://www.arabidopsis.org/servlets/TairObject?id=1005158920&type=germplasm
CS57896
http://www.arabidopsis.org/servlets/TairObject?id=1005158920&type=germplasm
James Malone
GM07345
GeneRIF:12738632
Unspecified malaria (disorder)[accessedResource: SNOMEDCT:186797008][accessDate: 04-11-2010]
MALARIA COMPLICATED NEC
malaria
NCIt:C34797
MALARIA NEC
GeneRIF:15718915
induced malaria[accessedResource: DOID:12365][accessDate: 04-11-2010]
GeneRIF:11971017
Induced malaria (disorder)
Other pernicious complications of malaria
GeneRIF:12496175
SNOMEDCT:248437004
MALARIA NEC[accessedResource: ICD9:084.4][accessDate: 04-11-2010]
[X]Unspecified malaria[accessedResource: SNOMEDCT:187510004][accessDate: 04-11-2010]
GeneRIF:12486610
Malarial fever
GeneRIF:15931230
GeneRIF:15933743
GeneRIF:14595440
Other malaria (disorder)
Other malaria (disorder)[accessedResource: SNOMEDCT:266121001][accessDate: 04-11-2010]
GeneRIF:12654091
GeneRIF:11434773
Disease due to Plasmodiidae (disorder)
A protozoan infection caused by the genus Plasmodium. There are four species of Plasmodium that can infect humans: Plasmodium falciparum, vivax, ovale, and malariae. It is transmitted to humans by infected mosquitoes. Signs and symptoms include paroxysmal high fever, sweating, chills, and anemia.[accessedResource: NCIt:C34797][accessDate: 04-11-2010]
GeneRIF:12574396
GeneRIF:14767829
GeneRIF:15724813
An Aconoidasida infectious disease characterized as a vector-borne infectious disease caused by the presence of protozoan parasites of the genus Plasmodium in the red blood cells, transmitted from an infected to an uninfected individual by the bite of anopheline mosquitoes, and characterized by periodic attacks of chills and fever that coincide with mass destruction of blood cells and the release of toxic substances by the parasite at the end of each reproductive cycle.[accessedResource: DOID:12365][accessDate: 04-11-2010]
An Aconoidasida infectious disease characterized as a vector-borne infectious disease caused by the presence of protozoan parasites of the genus Plasmodium in the red blood cells, transmitted from an infected to an uninfected individual by the bite of anopheline mosquitoes, and characterized by periodic attacks of chills and fever that coincide with mass destruction of blood cells and the release of toxic substances by the parasite at the end of each reproductive cycle.
GeneRIF:15211007
GeneRIF:12654089
GeneRIF:12140747
Disease due to Plasmodiidae (disorder)[accessedResource: SNOMEDCT:105649009][accessDate: 04-11-2010]
MALARIA NOS
MALARIA COMPLICATED NEC[accessedResource: ICD9:084.9][accessDate: 04-11-2010]
[X]Unspecified malaria (disorder)
GeneRIF:15973412
ICD9:084.4
GeneRIF:15383590
GeneRIF:15853902
SNOMEDCT:186797008
[X]Unspecified malaria
GeneRIF:15500919
SNOMEDCT:266121001
GeneRIF:15634900
ICD9:084.6
GeneRIF:11668637
induced malaria
Malaria, unspecified[accessedResource: ICD9:084.6][accessDate: 04-11-2010]
Malarial fever[accessedResource: SNOMEDCT:248437004][accessDate: 04-11-2010]
Malaria (disorder)[accessedResource: SNOMEDCT:61462000][accessDate: 04-11-2010]
Induced malaria (disorder)[accessedResource: DOID:12365][accessDate: 04-11-2010]
Other malaria[accessedResource: SNOMEDCT:266121001][accessDate: 04-11-2010]
GeneRIF:15478802
James Malone
Malaria (disorder)
GeneRIF:16113307
GeneRIF:12117997
GeneRIF:12402212
Malarial fever (finding)
Disease due to Plasmodiidae[accessedResource: SNOMEDCT:105649009][accessDate: 04-11-2010]
GeneRIF:12626578
Other pernicious complications of malaria[accessedResource: ICD9:084.9][accessDate: 04-11-2010]
Malaria is a parasitic disease characterized as a vector-borne arthropod infectious acute or chronic disease caused by the presence of sporozoan parasites of the genus Plasmodium in the red blood cells, transmitted from an infected to an uninfected individual by the bite of anopheline mosquitoes, and characterized by periodic attacks of chills and fever that coincide with mass destruction of blood cells and the release of toxic substances by the parasite at the end of each reproductive cycle. Occurrance is widespread in tropical and subtropical regions, including parts of the Americas, Asia, and Africa.
ICD9:084
Paludism
DOID:12365
SNOMEDCT:187510004
GeneRIF:12933825
GeneRIF:15691125
Unspecified malaria (disorder)
Plasmodiosis
Malarial fever (finding)[accessedResource: SNOMEDCT:248437004][accessDate: 04-11-2010]
Unspecified malaria
GeneRIF:12125143
GeneRIF:15845528
GeneRIF:15086902
A protozoan infection caused by the genus Plasmodium. There are four species of Plasmodium that can infect humans: Plasmodium falciparum, vivax, ovale, and malariae. It is transmitted to humans by infected mosquitoes. Signs and symptoms include paroxysmal high fever, sweating, chills, and anemia.
Plasmodiosis[accessedResource: SNOMEDCT:61462000][accessDate: 04-11-2010]
[X]Unspecified malaria (disorder)[accessedResource: SNOMEDCT:187510004][accessDate: 04-11-2010]
Malaria, NOS[accessedResource: SNOMEDCT:61462000][accessDate: 04-11-2010]
GeneRIF:15272009
SNOMEDCT:61462000
GeneRIF:12746397
GeneRIF:15319871
ICD9:084.9
GeneRIF:14695625
Disease due to Plasmodiidae
GeneRIF:14694201
Paludism[accessedResource: SNOMEDCT:61462000][accessDate: 04-11-2010]
SNOMEDCT:105649009
Other malaria
GeneRIF:15322007
Tomasz Adamusiak
torus semicircularis
ZFA:0000599
microgram per kilogram per day
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Microgram_per_Kilogram_per_Day
ug per kg per day
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#age
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#age[accessedResource: MO_467][accessDate: 04-11-2010]
Tomasz Adamusiak
A temporal measurement of the time period elapsed since an identifiable point in the life cycle of an organism. If a developmental stage is specified, the identifiable point would be the beginning of that stage. Otherwise the identifiable point must be specified such as planting (e.g. 3 days post planting).
age
Jie Zheng
James Malone
3 days post planting
MO_467
Ele Holloway
James Malone
SW1783
James Malone
Genetic traits are small inherited parts of the phenotype of an organism
genetic trait
Tomasz Adamusiak
ILSXISS51/TejJ
http://jaxmice.jax.org/strain/009272.html
STRUCTURE_Formula:C23H28BrN3O3
NAN 190 hydrobromide
CASRN:115388-32-4
Tomasz Adamusiak
STRUCTURE_ChemicalName_IUPAC:2-{4-[4-(2-methoxyphenyl)piperazin-1-yl]butyl}-1H-isoindole-1,3(2H)-dione hydrobromide
DSSTox_CID:22588
James Malone
Ele Holloway
DSSTox_Generic_SID:42588
Tomasz Adamusiak
blastema
ZFA:0001270
CHEBI:24127
James Malone
http://www.ebi.ac.uk/efo/EFO_0001823
A substance used to destroy fungal pests.
fungicide
fungicides
James Malone
600MPE
2-deoxy-D-glucose
154-17-6
17648
37648
James Malone
molar
true
http://www.ebi.ac.uk/efo/EFO_0001805
A molar is a unit of molarity which expresses a concentration of 1 mole of solute per liter of solution (mol/L).
MO_936
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#M[accessedResource: MO_936][accessDate: 04-11-2010]
A unit of concentration which expresses a concentration of 1 mole of solute per liter of solution (mol/L).
Jie Zheng
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#M
Tomasz Adamusiak
M
Ele Holloway
James Malone
D4 glioblastoma derived primary cell line
D4
Jie Zheng
Tomasz Adamusiak
ciliary ganglion
FMAID:6964
CHEBI:50630
James Malone
http://www.ebi.ac.uk/efo/EFO_0001891
A cyclooxygenase inhibitor with specificity for cyclooxygenase 1.
cyclooxygenase 1 inhibitor
COX-1 inhibitor
Tomasz Adamusiak
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#virus[accessedResource: MO_372][accessDate: 04-11-2010]
James Malone
MO_372
http://www.ebi.ac.uk/efo/EFO_0001450
Jie Zheng
Virus
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#virus
Tomasz Adamusiak
IDOMAL:0000322
hepatic schizont
Jie Zheng
A schizont produced in the liver of the vertebrate host.
hepatic schizont stage
A schizont produced in the liver of the vertebrate host.[accessedResource: IDOMAL:0000322][accessDate: 04-11-2010]
hepatic schizont stage[accessedResource: IDOMAL:0000322][accessDate: 04-11-2010]
James Malone
true
1.6
Duplication: use class EFO_0001988
obsolete_lateral geniculate nucleus
MA:0000869
http://www.ebi.ac.uk/efo/location_of
location_of
http://www.ebi.ac.uk/efo/is_realized_by
Relation between a realizable entity and a process. Reciprocal relation of realizes
is_realized_by
has_disease_location
http://www.ebi.ac.uk/efo/realizes
Relation between a process and a material fulfilling a role (i.e. realizing a role within the context of the process). For example a human realizing role of teacher within a lesson teching process.
realizes
http://www.ebi.ac.uk/efo/is_input_of
is_input_of
http://www.ebi.ac.uk/efo/contains
contains
is_unit_of
http://www.ebi.ac.uk/efo/located_in
located_in
Has_participant is a primitive instance-level relation between a process, a continuant, and a time at which the A continuant participates in some way in the process. The relation obtains, for example, when this particular process of oxygen exchange across this particular alveolar membrane has_participant this particular sample of hemoglobin at this particular time.
has_participant
Participates in is a primitive instance-level relation between a continuant and a process in which it participates. For example a scanner participates in a scanning process at some specific time.
participates_in
http://www.ebi.ac.uk/efo/has_input
has_input
http://www.ebi.ac.uk/efo/contained_in
Containment obtains in each case between material and immaterial continuants, for instance: lung contained_in thoracic cavity; bladder contained_in pelvic cavity. Hence containment is not a transitive relation. If c part_of c1 at t then we have also, by our definition and by the axioms of mereology applied to spatial regions, c located_in c1 at t. Thus, many examples of instance-level location relations for continuants are in fact cases of instance-level parthood. For material continuants location and parthood coincide. Containment is location not involving parthood, and arises only where some immaterial continuant is involved. To understand this relation, we first define overlap for continuants as follows: c1 overlap c2 at t =def for some c, c part_of c1 at t and c part_of c2 at t.
contained_in
relationship
is_location_of_disease
EFO_0000823
http://www.ebi.ac.uk/efo/has_part
has_part
has_unit
http://www.ebi.ac.uk/efo/derived_into
derived_into
EFO_0000822
http://www.ebi.ac.uk/efo/part_of
For continuants: C part_of C' if and only if: given any c that instantiates C at a time t, there is some c' such that c' instantiates C' at time t, and c *part_of* c' at t. For processes: P part_of P' if and only if: given any p that instantiates P at a time t, there is some p' such that p' instantiates P' at time t, and p *part_of* p' at t. (Here *part_of* is the instance-level part-relation.)
part_of
http://www.ebi.ac.uk/efo/derives_from
Derivation as a relation between instances. The temporal relation of derivation is more complex. Transformation, on the instance level, is just the relation of identity: each adult is identical to some child existing at some earlier time. Derivation on the instance-level is a relation holding between non-identicals. More precisely, it holds between distinct material continuants when one succeeds the other across a temporal divide in such a way that at least a biologically significant portion of the matter of the earlier continuant is inherited by the later. Thus we will have axioms to the effect that from c derives_from c1 we can infer that c and c1 are not identical and that there is some instant of time t such that c1 exists only prior to and c only subsequent to t. We will also be able to infer that the spatial region occupied by c as it begins to exist at t overlaps with the spatial region occupied by c1 as it ceases to exist in the same instant.
derives_from
http://www.ebi.ac.uk/efo/EFO_0000829
inheres_in
http://www.ebi.ac.uk/efo/is_role_of
role_of
http://www.ebi.ac.uk/efo/has_role
A relation between a continuant C and a role R. The reciprocal relation of role_of.
has_role
http://www.ebi.ac.uk/efo/has_quality
has_quality
http://www.ebi.ac.uk/efo/EFO_0001377
A relation between an entity and a dependent continuant; the reciprocal relation of inheres_in [GOC:cjm] example of usage: red eye bearer_of redness
bearer_of
James Malone
ENCODE, full name the Encyclopedia Of DNA Elements, is a public research consortium which has the aim of identifying all functional elements in the human genome sequence.
ENCODE
ENCODE website <http://www.genome.gov/10005107>