@ Ontology Change Report @ First ontology URI: file:///srv/ncbo/share/env/prod/repository/GO/1312/gene_ontology_edit.obo @ Second ontology URI: file:///srv/ncbo/share/env/prod/repository/GO/1311/gene_ontology_edit.obo @ File Written at 2013.11.14 at 12:52:35 PST @ Number of classes changed: 38 @ Number of classes added: 0 @Classes modified from previous --- Class Changed: http://www.geneontology.org/go#GO_0001563 label: detection of protozoan + SubClassOf('detection of protozoan' 'detection of biotic stimulus') - SubClassOf('detection of protozoan' 'detection of other organism') --- Class Changed: http://www.geneontology.org/go#GO_0097532 label: stress response to acid - SubClassOf('stress response to acid' 'response to acid') - SubClassOf('stress response to acid' 'response to stress') --- Class Changed: http://www.geneontology.org/go#GO_0030897 label: HOPS complex + SubClassOf('HOPS complex' ObjectSomeValueFrom('part_of' 'vacuolar membrane')) + SubClassOf('HOPS complex' 'vacuolar part') --- Class Changed: http://www.geneontology.org/go#GO_1902485 label: L-cysteine binding - SubClassOf('L-cysteine binding' 'sulfur compound binding') - SubClassOf('L-cysteine binding' 'cation binding') - SubClassOf('L-cysteine binding' 'amino acid binding') --- Class Changed: http://www.geneontology.org/go#GO_0050648 label: 5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding + SubClassOf('5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding' 'monocarboxylic acid binding') - SubClassOf('5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding' 'fatty acid binding') --- Class Changed: http://www.geneontology.org/go#GO_0048246 label: macrophage chemotaxis - SubClassOf('macrophage chemotaxis' 'myeloid leukocyte migration') --- Class Changed: http://www.geneontology.org/go#GO_1901497 label: response to diphenyl ether - SubClassOf('response to diphenyl ether' 'response to organic cyclic compound') --- Class Changed: http://www.geneontology.org/go#GO_0006926 label: virus-infected cell apoptotic process + SubClassOf('virus-infected cell apoptotic process' 'cell-type specific apoptotic process') --- Class Changed: http://www.geneontology.org/go#GO_0009600 label: detection of nematode + SubClassOf('detection of nematode' 'detection of biotic stimulus') - SubClassOf('detection of nematode' 'detection of other organism') - SubClassOf('detection of nematode' 'response to nematode') --- Class Changed: http://www.geneontology.org/go#GO_0042832 label: defense response to protozoan + SubClassOf('defense response to protozoan' 'defense response') - SubClassOf('defense response to protozoan' 'defense response to other organism') --- Class Changed: http://www.geneontology.org/go#GO_0016942 label: insulin-like growth factor binding protein complex + SubClassOf('insulin-like growth factor binding protein complex' 'protein complex') --- Class Changed: http://www.geneontology.org/go#GO_0097533 label: cellular stress response to acid - SubClassOf('cellular stress response to acid' 'cellular response to acid') - SubClassOf('cellular stress response to acid' 'cellular response to stress') - SubClassOf('cellular stress response to acid' 'stress response to acid') --- Class Changed: http://www.geneontology.org/go#GO_0002215 label: defense response to nematode + SubClassOf('defense response to nematode' 'defense response') - SubClassOf('defense response to nematode' 'defense response to other organism') - SubClassOf('defense response to nematode' 'response to nematode') --- Class Changed: http://www.geneontology.org/go#GO_1901770 label: daunorubicin catabolic process - SubClassOf('daunorubicin catabolic process' 'quinone catabolic process') --- Class Changed: http://www.geneontology.org/go#GO_0050832 label: defense response to fungus + SubClassOf('defense response to fungus' 'defense response') - SubClassOf('defense response to fungus' 'defense response to other organism') - SubClassOf('defense response to fungus' 'response to fungus') --- Class Changed: http://www.geneontology.org/go#GO_0051807 label: evasion or tolerance of defense response of other organism involved in symbiotic interaction + SubClassOf('evasion or tolerance of defense response of other organism involved in symbiotic interaction' 'defense response') - SubClassOf('evasion or tolerance of defense response of other organism involved in symbiotic interaction' 'defense response to other organism') --- Class Changed: http://www.geneontology.org/go#GO_0006209 label: cytosine catabolic process - SubClassOf('cytosine catabolic process' 'aromatic compound catabolic process') --- Class Changed: http://www.geneontology.org/go#GO_0051607 label: defense response to virus + SubClassOf('defense response to virus' 'defense response') - SubClassOf('defense response to virus' 'defense response to other organism') - SubClassOf('defense response to virus' 'response to virus') --- Class Changed: http://www.geneontology.org/go#GO_0071621 label: granulocyte chemotaxis - SubClassOf('granulocyte chemotaxis' 'granulocyte migration') --- Class Changed: http://www.geneontology.org/go#GO_0002408 label: myeloid dendritic cell chemotaxis - SubClassOf('myeloid dendritic cell chemotaxis' 'myeloid leukocyte migration') --- Class Changed: http://www.geneontology.org/go#GO_1990150 label: VEGF-A complex + SubClassOf('VEGF-A complex' 'protein complex') --- Class Changed: http://www.geneontology.org/go#GO_1901771 label: daunorubicin biosynthetic process - SubClassOf('daunorubicin biosynthetic process' 'quinone biosynthetic process') --- Class Changed: http://www.geneontology.org/go#GO_0072677 label: eosinophil migration + SubClassOf('eosinophil migration' 'leukocyte migration') - SubClassOf('eosinophil migration' 'granulocyte migration') --- Class Changed: http://www.geneontology.org/go#GO_0098542 label: defense response to other organism - SubClassOf('defense response to other organism' 'defense response') --- Class Changed: http://www.geneontology.org/go#GO_0044597 label: daunorubicin metabolic process - SubClassOf('daunorubicin metabolic process' 'quinone metabolic process') --- Class Changed: http://www.geneontology.org/go#GO_0009814 label: defense response, incompatible interaction + SubClassOf('defense response, incompatible interaction' 'response to other organism') - SubClassOf('defense response, incompatible interaction' 'defense response to other organism') --- Class Changed: http://www.geneontology.org/go#GO_0098543 label: detection of other organism - SubClassOf('detection of other organism' 'response to other organism') --- Class Changed: http://www.geneontology.org/go#GO_0009601 label: detection of insect + SubClassOf('detection of insect' 'detection of biotic stimulus') - SubClassOf('detection of insect' 'response to insect') - SubClassOf('detection of insect' 'detection of other organism') --- Class Changed: http://www.geneontology.org/go#GO_0016045 label: detection of bacterium + SubClassOf('detection of bacterium' 'detection of biotic stimulus') - SubClassOf('detection of bacterium' 'response to bacterium') - SubClassOf('detection of bacterium' 'detection of other organism') --- Class Changed: http://www.geneontology.org/go#GO_0046089 label: cytosine biosynthetic process - SubClassOf('cytosine biosynthetic process' 'aromatic compound biosynthetic process') --- Class Changed: http://www.geneontology.org/go#GO_0042742 label: defense response to bacterium + SubClassOf('defense response to bacterium' 'defense response') - SubClassOf('defense response to bacterium' 'defense response to other organism') - SubClassOf('defense response to bacterium' 'response to bacterium') --- Class Changed: http://www.geneontology.org/go#GO_0002548 label: monocyte chemotaxis - SubClassOf('monocyte chemotaxis' 'myeloid leukocyte migration') --- Class Changed: http://www.geneontology.org/go#GO_0002229 label: defense response to oomycetes + SubClassOf('defense response to oomycetes' 'defense response') - SubClassOf('defense response to oomycetes' 'response to oomycetes') - SubClassOf('defense response to oomycetes' 'defense response to other organism') --- Class Changed: http://www.geneontology.org/go#GO_0002231 label: detection of oomycetes + SubClassOf('detection of oomycetes' 'detection of biotic stimulus') - SubClassOf('detection of oomycetes' 'detection of other organism') - SubClassOf('detection of oomycetes' 'response to oomycetes') --- Class Changed: http://www.geneontology.org/go#GO_0002213 label: defense response to insect + SubClassOf('defense response to insect' 'defense response') - SubClassOf('defense response to insect' 'response to insect') - SubClassOf('defense response to insect' 'defense response to other organism') --- Class Changed: http://www.geneontology.org/go#GO_0016046 label: detection of fungus + SubClassOf('detection of fungus' 'detection of biotic stimulus') - SubClassOf('detection of fungus' 'response to fungus') - SubClassOf('detection of fungus' 'detection of other organism') --- Class Changed: http://www.geneontology.org/go#GO_0002551 label: mast cell chemotaxis - SubClassOf('mast cell chemotaxis' 'mast cell migration') --- Class Changed: http://www.geneontology.org/go#GO_0002242 label: defense response to parasitic plant + SubClassOf('defense response to parasitic plant' 'defense response') - SubClassOf('defense response to parasitic plant' 'defense response to other organism') @New Classes