@ Ontology Change Report @ First ontology URI: file:///srv/ncbo/share/env/prod/repository/GO/1325/gene_ontology_edit.obo @ Second ontology URI: file:///srv/ncbo/share/env/prod/repository/GO/1324/gene_ontology_edit.obo @ File Written at 2013.11.30 at 12:49:33 PST @ Number of classes changed: 41 @ Number of classes added: 5 @Classes modified from previous --- Class Changed: http://www.geneontology.org/go#GO_0047496 label: vesicle transport along microtubule + SubClassOf('vesicle transport along microtubule' 'vesicle localization') - SubClassOf('vesicle transport along microtubule' 'establishment of vesicle localization') --- Class Changed: http://www.geneontology.org/go#GO_0071426 label: ribonucleoprotein complex export from nucleus + SubClassOf('ribonucleoprotein complex export from nucleus' 'ribonucleoprotein complex localization') - SubClassOf('ribonucleoprotein complex export from nucleus' ObjectSomeValueFrom('part_of' 'ribonucleoprotein complex localization')) --- Class Changed: http://www.geneontology.org/go#GO_0045048 label: protein insertion into ER membrane + SubClassOf('protein insertion into ER membrane' 'protein localization to organelle') - SubClassOf('protein insertion into ER membrane' ObjectSomeValueFrom('part_of' 'protein localization to organelle')) --- Class Changed: http://www.geneontology.org/go#GO_0046771 label: viral budding from inner nuclear membrane + SubClassOf('viral budding from inner nuclear membrane' GO_0046749) - SubClassOf('viral budding from inner nuclear membrane' 'viral budding from nuclear membrane') --- Class Changed: http://www.geneontology.org/go#GO_0097535 label: lymphoid lineage cell migration into thymus - SubClassOf('lymphoid lineage cell migration into thymus' 'lymphoid lineage cell migration') --- Class Changed: http://www.geneontology.org/go#GO_0036316 label: SREBP-SCAP complex retention in endoplasmic reticulum + SubClassOf('SREBP-SCAP complex retention in endoplasmic reticulum' 'cellular protein complex localization') --- Class Changed: http://www.geneontology.org/go#GO_0047468 label: phosphoglucomutase (glucose-cofactor) activity + SubClassOf('phosphoglucomutase (glucose-cofactor) activity' 'intramolecular transferase activity, phosphotransferases') - SubClassOf('phosphoglucomutase (glucose-cofactor) activity' 'phosphoglucomutase activity') --- Class Changed: http://www.geneontology.org/go#GO_0030730 label: sequestering of triglyceride + SubClassOf('sequestering of triglyceride' 'maintenance of location') --- Class Changed: http://www.geneontology.org/go#GO_0044376 label: RNA polymerase II complex localization to nucleus + SubClassOf('RNA polymerase II complex localization to nucleus' 'nuclear import') --- Class Changed: http://www.geneontology.org/go#GO_0071167 label: ribonucleoprotein complex import into nucleus + SubClassOf('ribonucleoprotein complex import into nucleus' 'ribonucleoprotein complex localization') - SubClassOf('ribonucleoprotein complex import into nucleus' ObjectSomeValueFrom('part_of' 'ribonucleoprotein complex localization')) --- Class Changed: http://www.geneontology.org/go#GO_0019069 label: viral capsid assembly + SubClassOf('viral capsid assembly' 'cellular process involved in reproduction') + SubClassOf('viral capsid assembly' 'cellular component assembly') - SubClassOf('viral capsid assembly' 'cellular component organization') --- Class Changed: http://www.geneontology.org/go#GO_0051205 label: protein insertion into membrane + SubClassOf('protein insertion into membrane' 'localization within membrane') + SubClassOf('protein insertion into membrane' 'cellular protein localization') - SubClassOf('protein insertion into membrane' ObjectSomeValueFrom('part_of' 'localization within membrane')) - SubClassOf('protein insertion into membrane' ObjectSomeValueFrom('part_of' 'cellular protein localization')) - SubClassOf('protein insertion into membrane' 'establishment of protein localization to membrane') --- Class Changed: http://www.geneontology.org/go#GO_0019072 label: viral genome packaging + SubClassOf('viral genome packaging' 'cellular process involved in reproduction') --- Class Changed: http://www.geneontology.org/go#GO_0046752 label: viral capsid precursor localization to host cell nucleus + SubClassOf('viral capsid precursor localization to host cell nucleus' ObjectSomeValueFrom('part_of' 'viral capsid assembly')) + SubClassOf('viral capsid precursor localization to host cell nucleus' ObjectSomeValueFrom('part_of' 'regulation by virus of viral protein levels in host cell')) - SubClassOf('viral capsid precursor localization to host cell nucleus' ObjectSomeValueFrom('part_of' 'nuclear capsid assembly')) --- Class Changed: http://www.geneontology.org/go#GO_0019070 label: viral genome maturation + SubClassOf('viral genome maturation' 'cellular process involved in reproduction') --- Class Changed: http://www.geneontology.org/go#GO_0030050 label: vesicle transport along actin filament + SubClassOf('vesicle transport along actin filament' 'vesicle localization') - SubClassOf('vesicle transport along actin filament' 'establishment of vesicle localization') --- Class Changed: http://www.geneontology.org/go#GO_0019068 label: virion assembly + SubClassOf('virion assembly' 'cellular component assembly') + SubClassOf('virion assembly' 'cellular process involved in reproduction') - SubClassOf('virion assembly' 'cellular component organization') --- Class Changed: http://www.geneontology.org/go#GO_0097534 label: lymphoid lineage cell migration - SubClassOf('lymphoid lineage cell migration' 'cell migration') --- Class Changed: http://www.geneontology.org/go#GO_0039710 label: cytoplasmic icosahedral capsid assembly - SubClassOf('cytoplasmic icosahedral capsid assembly' 'cytoplasmic capsid assembly') --- Class Changed: http://www.geneontology.org/go#GO_0098003 label: viral tail assembly + SubClassOf('viral tail assembly' 'cellular component assembly') + SubClassOf('viral tail assembly' 'cellular process involved in reproduction') - SubClassOf('viral tail assembly' 'cellular component organization') --- Class Changed: http://www.geneontology.org/go#GO_0039709 label: cytoplasmic capsid assembly - SubClassOf('cytoplasmic capsid assembly' 'viral capsid assembly') --- Class Changed: http://www.geneontology.org/go#GO_0035928 label: rRNA import into mitochondrion + SubClassOf('rRNA import into mitochondrion' 'mitochondrial rRNA export from mitochondrion') --- Class Changed: http://www.geneontology.org/go#GO_1990022 label: RNA polymerase III complex localization to nucleus + SubClassOf('RNA polymerase III complex localization to nucleus' 'nuclear import') --- Class Changed: http://www.geneontology.org/go#GO_0051204 label: protein insertion into mitochondrial membrane + SubClassOf('protein insertion into mitochondrial membrane' 'protein localization to mitochondrion') - SubClassOf('protein insertion into mitochondrial membrane' ObjectSomeValueFrom('part_of' 'protein localization to mitochondrion')) --- Class Changed: http://www.geneontology.org/go#GO_0097536 label: thymus epithelium morphogenesis - SubClassOf('thymus epithelium morphogenesis' 'morphogenesis of an epithelium') - SubClassOf('thymus epithelium morphogenesis' ObjectSomeValueFrom('part_of' 'thymus development')) --- Class Changed: http://www.geneontology.org/go#GO_0098045 label: virus baseplate assembly + SubClassOf('virus baseplate assembly' 'cellular process involved in reproduction') --- Class Changed: http://www.geneontology.org/go#GO_0039711 label: cytoplasmic helical capsid assembly - SubClassOf('cytoplasmic helical capsid assembly' 'cytoplasmic capsid assembly') --- Class Changed: http://www.geneontology.org/go#GO_0039708 label: nuclear capsid assembly - SubClassOf('nuclear capsid assembly' 'viral capsid assembly') --- Class Changed: http://www.geneontology.org/go#GO_0072656 label: maintenance of protein location in mitochondrion + SubClassOf('maintenance of protein location in mitochondrion' 'protein localization to mitochondrion') - SubClassOf('maintenance of protein location in mitochondrion' ObjectSomeValueFrom('part_of' 'protein localization to mitochondrion')) --- Class Changed: http://www.geneontology.org/go#GO_0075526 label: cap snatching + SubClassOf('cap snatching' ObjectSomeValueFrom('part_of' 'viral transcription')) - SubClassOf('cap snatching' ObjectSomeValueFrom('part_of' 'negative stranded viral RNA transcription')) --- Class Changed: http://www.geneontology.org/go#GO_0019090 label: mitochondrial rRNA export from mitochondrion + SubClassOf('mitochondrial rRNA export from mitochondrion' 'mitochondrial RNA localization') - SubClassOf('mitochondrial rRNA export from mitochondrion' ObjectSomeValueFrom('part_of' 'mitochondrial RNA localization')) --- Class Changed: http://www.geneontology.org/go#GO_0046772 label: viral budding from outer nuclear membrane + SubClassOf('viral budding from outer nuclear membrane' GO_0046749) - SubClassOf('viral budding from outer nuclear membrane' 'viral budding from nuclear membrane') --- Class Changed: http://www.geneontology.org/go#GO_0071790 label: establishment of spindle pole body localization to nuclear envelope + SubClassOf('establishment of spindle pole body localization to nuclear envelope' 'spindle pole body localization to nuclear envelope') - SubClassOf('establishment of spindle pole body localization to nuclear envelope' ObjectSomeValueFrom('part_of' 'spindle pole body localization to nuclear envelope')) --- Class Changed: http://www.geneontology.org/go#GO_0060154 label: cellular process regulating host cell cycle in response to virus + SubClassOf('cellular process regulating host cell cycle in response to virus' ObjectSomeValueFrom('part_of' 'modification by virus of host cell cycle regulation')) --- Class Changed: http://www.geneontology.org/go#GO_0046807 label: viral scaffold assembly and maintenance + SubClassOf('viral scaffold assembly and maintenance' 'cellular process involved in reproduction') --- Class Changed: http://www.geneontology.org/go#GO_0046755 label: viral budding - SubClassOf('viral budding' ObjectSomeValueFrom('part_of' 'virion assembly')) --- Class Changed: http://www.geneontology.org/go#GO_0019071 label: viral DNA cleavage involved in viral genome maturation + SubClassOf('viral DNA cleavage involved in viral genome maturation' 'cellular process involved in reproduction') --- Class Changed: http://www.geneontology.org/go#GO_0019915 label: lipid storage + SubClassOf('lipid storage' 'lipid localization') - SubClassOf('lipid storage' 'maintenance of location') - SubClassOf('lipid storage' ObjectSomeValueFrom('part_of' 'lipid localization')) --- Class Changed: http://www.geneontology.org/go#GO_0098005 label: viral head-tail joining + SubClassOf('viral head-tail joining' 'cellular process involved in reproduction') --- Class Changed: http://www.geneontology.org/go#GO_0098004 label: virus tail fiber assembly + SubClassOf('virus tail fiber assembly' 'cellular process involved in reproduction') --- Class Changed: http://www.geneontology.org/go#GO_0070632 label: establishment of spindle pole body localization + SubClassOf('establishment of spindle pole body localization' 'spindle pole body localization') - SubClassOf('establishment of spindle pole body localization' ObjectSomeValueFrom('part_of' 'spindle pole body localization')) @New Classes --- !New Class!: http://www.geneontology.org/go#GO_0046751 label: viral budding from ER membrane by viral capsid envelopment + SubClassOf('viral budding from ER membrane by viral capsid envelopment' 'viral budding from ER membrane') + SubClassOf('viral budding from ER membrane by viral capsid envelopment' 'viral capsid envelopment') --- !New Class!: http://www.geneontology.org/go#GO_0046744 label: viral capsid envelopment + SubClassOf('viral capsid envelopment' 'viral process') + SubClassOf('viral capsid envelopment' ObjectSomeValueFrom('part_of' 'viral capsid assembly')) + SubClassOf('viral capsid envelopment' 'cellular process involved in reproduction') --- !New Class!: http://www.geneontology.org/go#GO_0046750 label: viral budding from Golgi membrane by viral capsid envelopment + SubClassOf('viral budding from Golgi membrane by viral capsid envelopment' 'viral budding from Golgi membrane') + SubClassOf('viral budding from Golgi membrane by viral capsid envelopment' 'viral capsid envelopment') --- !New Class!: http://www.geneontology.org/go#GO_0046767 label: viral budding from plasma membrane by viral capsid envelopment + SubClassOf('viral budding from plasma membrane by viral capsid envelopment' 'viral capsid envelopment') + SubClassOf('viral budding from plasma membrane by viral capsid envelopment' 'viral budding from plasma membrane') --- !New Class!: http://www.geneontology.org/go#GO_0046749 label: viral budding from nuclear membrane by viral capsid envelopment + SubClassOf('viral budding from nuclear membrane by viral capsid envelopment' 'viral capsid envelopment') + SubClassOf('viral budding from nuclear membrane by viral capsid envelopment' 'viral budding from nuclear membrane')