instrumentModel
manufacturer
sequenceAccession
termsofDistribution
timepoint
units
version
JERMOntology:Accelerator_mass_spectrometry
JERM:00120
Accelerator Mass Spectrometry
JERMOntology:Activity
JERM:110001
Activity
JERMOntology:Affinity_chromatography
Affinity chromatography is based on selective non-covalent interaction between an analyte and specific molecules.
It is often used in biochemistry in the purification of proteins bound to tags. These fusion proteins are labeled with compounds such as His-tags, biotin or antigens, which bind to the stationary phase specifically.
JERM:00110
affinity_purification
Affinity Chromatography
JERMOntology:Algebraic_equation
JERM:00139
Algebraic Equation
JERMOntology:Amplification
e.g. RT_PCR to amplify DNA from RNA
JERM:000007
Amplification
JERMOntology:Assay
An assay is a combination of a process (experiment) and a protocol.
JERM:00021
Assay
JERMOntology:Assay_type
An assay type describes the type of experiment being performed
JERM:00024
The assay_type hierarchy allows scientists to categorise their experimental assays, informatics analyses and computational models
Assay Type
JERMOntology:Asset
all shareable entities in the SEEK are kinds of Assets
JERM:00010
Asset
JERMOntology:Bait_protein_tagging
JERM:00135
Bait Protein Tagging
JERMOntology:Batch
A large-scale closed system culture in which cells are grown in a fixed volume of nutrient culture medium under specific environmental conditions
JERM:021
Batch
JERMOntology:Binding
laboratory techniques which involve separation by binding the molecules of interest
JERM:00094
Binding
JERMOntology:Bioinformatics_analysis
a bioinformatics analysis is an "assay" performed in silico, employing bioinformatics techniques to analyse biological data
JERM:00046
Bioinformatics Analysis
JERMOntology:Biological_entity
JERM:40012
Biological Entity
JERMOntology:Buffer
JERM:011
Buffer
JERMOntology:By-product_formation
JERM:004
By-product Formation
JERMOntology:Capillary_electrophoresis
JERM:00113
Capillary Electrophoresis
JERMOntology:Catabolic_response
JERM:00068
Catabolic Response
JERMOntology:CellML
JERM:40020
CellML
JERMOntology:Cell_count
Cell Count
JERMOntology:Cell_cycle
JERM:00048
Cell Cycle
JERMOntology:Cell_growth_optimisation
JERM:00066
Cell Growth Optimisation
JERMOntology:Cell_growth_rate
JERM:00151
Cell Growth Rate
JERMOntology:Cell_line
JERM:00201
Cell Line
JERMOntology:Cell_size
JERM:006
Cell Size
JERMOntology:ChIP-on-chip
JERM:00130
Chromatin Immunoprecipitation on Chip
ChIP-on-chip
JERMOntology:Characteristics_for_assay
JERM:00155
Characteristics for Assay
JERMOntology:Characteristics_for_sample
JERM:00156
Characteristics for Sample
JERMOntology:Cheminformatics_analysis
a cheminformatics analysis is an "assay" performed in silico, employing cheminformatics techniques to analyse biological data
JERM:00047
Cheminformatics Analysis
JERMOntology:Chemostat
a bioreactor to which fresh medium is continuously added, while culture liquid is continuously removed to keep the culture volume constant.
JERM:022
Chemostat
JERMOntology:Chemostat_measurements
JERM:00184
Chemostat Measurement
JERMOntology:Chip-Seq
JERM:018
JERMOntology:Chromatography
Chromatography is the collective term for a set of laboratory techniques for the separation of mixtures. It involves passing a mixture dissolved in a "mobile phase" through a stationary phase, which separates the analyte to be measured from other molecules in the mixture based on differential partitioning between the mobile and stationary phases.
JERM:00095
Chromatography
JERMOntology:Collision_cell
JERM:50003
Collision Cell
JERMOntology:Community_standard_specification
JERM:00192
Community Standard Specification
JERMOntology:Comparative_genomic_hybridization
JERM:00086
Comparative Genomic Hybridization
JERMOntology:Comparative_genomics
JERM:00060
Comparative Genomics
JERMOntology:Compound
JERM:015
Compound
JERMOntology:Concentration
JERM:00031
Concentration
JERMOntology:Continuous_enzymatic
JERM:008
Continuous Enzymatic
JERMOntology:Cultivation_experiment
JERM:00216
Cultivation Experiment
JERMOntology:CultureGrowthType
Experiments can be performed on cell cultures, so it is essential to record the type of culture in use each time
JERM:00026
Culture Growth Type
JERMOntology:Custom_Array
JERM:00132
Custom Array
JERMOntology:DNA_Methylation
JERM:00131
DNA Methylation
JERMOntology:DNA_sequencing
JERM:00058
DNA Sequencing
JERMOntology:Data
SEEK data files
JERM:00011
Data
JERMOntology:Data_file_format
JERM:00038
Data File Format
JERMOntology:Data_sample
An electronic description of a sample that can be used to derive a physical sample, for example a DNA sequence
JERM:00144
Data Sample
JERMOntology:Detectors
JERM:50004
Detectors
JERMOntology:Dilution_rate
Dilution Rate
JERMOntology:Discontinuous_enzymatic
JERM:009
Discontinuous Enzymatic
JERMOntology:Dry_biomass
JERM:00037
Dry Biomass
JERMOntology:ELISA
JERM:00188
ELISA
JERMOntology:Electron_scanning_microscopy
JERM:00186
JERMOntology:Electrophoresis
Electrophoresis is the motion of dispersed particles relative to a fluid under the influence of a spatially uniform electric field
JERM:00096
Electrophoresis
JERMOntology:ElectrosprayIonisation
JERM:50000
Electrospray Ionisation
JERMOntology:Enzymatic_activity_measurements
JERM:00097
Enzymatic Activity Measurements
JERMOntology:Enzymatic_assay
JERM:00083
Enzymatic Assay
JERMOntology:Enzyme
JERM:501000
Enzyme
JERMOntology:Enzyme_activity
JERM:012
Enzyme Activity
JERMOntology:Enzymology
JERM:00049
Enzymology
JERMOntology:Equipment
tools or machines used in the laboratory, or computer hardware or software used for data analysis
JERM:90004
Equipment
JERMOntology:Exon_array
JERM:50015
Exon Array
JERMOntology:Experimental_assay_type
JERM:00043
An experimental assay is an assay carried out in a laboratory
Experimental Assay Type
JERMOntology:Experimental_design_type
JERM:58493
Experimental Design Type
JERMOntology:Experimental_factor_type
JERM:26754
Experimental Factory Type
JERMOntology:Experimental_factors
ExperimentalFactors are descriptors of the properties of the experiment. How the culture was prepared, what organism they are from, and what type of experiment was run
JERM:00017
Experimental Factors
JERMOntology:Expression
JERM:00033
Expression
JERMOntology:Expression_value_measurement_type
JERM:20946
Expression Value Measurement
JERMOntology:Extracellular_concentration
JERM:000001
Extracellular Concentration
JERMOntology:Extracellular_metabolite_concentration
JERM:00149
Extracellular Metabolite Concentration
JERMOntology:FACS
Fluorescence Activated Cell Sorting
JERM:90002
FACS
JERMOntology:FRAP
JERM:00119
fluorescence recovery after photobleaching
FRAP
JERMOntology:FT-ICR
JERM:50005
FT-ICR
JERMOntology:Factors_studied
factors studied describe what types of measurements were taken (i.e. what factors were expected to change during the experiment)
JERM:00027
also known as ExperimentalConditions when used to set up initial conditions for an experiment/assay
Factors Studied
JERMOntology:Flow_cytometry
JERM:90003
Flow Cytometry
JERMOntology:Flux_balance_analysis
a method for analysing the flow of metabolites through metabolic networks
JERM:00069
Flux Balance Analysis
JERMOntology:Fluxomics
the dynamic changes of molecules within a cell over time
JERM:00056
Fluxomics
JERMOntology:Format
JERM:00018
Format
JERMOntology:Functional_biological_entity
JERM:40014
Functional Biological Entity
JERMOntology:Gas_chromatography
Gas chromatography (GC) is a separation technique in which the mobile phase is a gas
JERM:00111
Gas Chromatography
JERMOntology:Gas_chromatography_mass_spectrometry
JERM:00121
Gas Chromatography Mass Spectrometry
JERMOntology:Gas_flow
JERM:110002
Gas Flow
JERMOntology:Gel_electrophoresis
JERM:00114
Gel Electrophoresis
JERMOntology:Gel_filtration
Size exclusion chromatography (SEC), also known as gel permeation chromatography or gel filtration chromatography, separates particles on the basis of size. It is generally a low resolution chromatography and thus it is often reserved for the final, "polishing" step of a purification. It is also useful for determining the tertiary structure and quaternary structure of purified proteins.
JERM:00112
size_exclusion_chromatography
Gel Filtration
JERMOntology:Gene
JERM:40015
Gene
JERMOntology:Gene_expression
JERM:00050
Gene Expression
JERMOntology:Gene_expression_profiling
analysing the gene expression across an organism in particular environmental conditions
JERM:00088
Gene Expression Profiling
JERMOntology:Gene_regulatory_network
JERM:00051
Gene Regulatory Network
JERMOntology:Genome
JERM:00202
Genome
JERMOntology:Genome-scale_enzyme_activity_profiling
JERM:00081
Genome-scale Enzyme Activity Profiling
JERMOntology:Genome_scale
JERM:010
Genome Scale
JERMOntology:Genome_wide_association
JERM:00209
Genome Wide Association
JERMOntology:Genomics
the study of the genome of an organism
JERM:00057
Genomics
JERMOntology:Genotyping
JERM:00061
Genotyping
JERMOntology:Glucose_pulse
JERM:00070
Glucose Pulse
JERMOntology:Growth_medium_composition
JERM:013
Growth Medium Composition
JERMOntology:Growth_rate
JERM:00181
Growth Rate
JERMOntology:HPLC
High Performance Liquid Chromatography.
Liquid chromatography (LC) is a separation technique in which the mobile phase is a liquid
JERM:00108
High Performance Liquid Chromatography
HPLC
JERMOntology:Hybridization
JERM:44538
Hybridization
JERMOntology:Imaging
JERM:00098
Imaging
JERMOntology:Immune_precipitation
JERM:00073
Immune Precipitation
JERMOntology:Immuno_electron_microscopy
JERM:00189
Immuno Electron Microscopy
JERMOntology:Immunoassay
JERM:00147
Immunoassay
JERMOntology:Immunostaining
JERM:00187
Immunostaining
JERMOntology:Inductively_coupled_plasma_mass_spectrometry
JERM:00122
Inductively Coupled Plasma Mass Spectrometry
JERMOntology:Information_entity
JERM:00143
Information Entity
JERMOntology:Initial_rate_experiment
JERM:00117
Initial Rate Experiment
JERMOntology:Inoculation_density
JERM:00182
Inoculation Density
JERMOntology:Instrument
machines or tools used in laboratory experiments
JERM:40004
Instrument
JERMOntology:Interactomics
the study of the network of interactions between proteins, metabolites and other biological objects in the cell, and the consequences of those interactions
JERM:00063
Interactomics
JERMOntology:Intracellular_concentration
JERM:000002
Intracellular Concentration
JERMOntology:Intracellular_metabolite_Concentration
JERM:00150
Intracellular Metabolite Concentration
JERMOntology:Investigation
A high level description of the experimental work undertaken
JERM:00022
Investigation
JERMOntology:Ion_mobility_spectrometry_mass_spectrometry
JERM:00123
Ion Mobility Spectrometry Mass Spectrometry
JERMOntology:Ion_optics
JERM:50006
Ion Optics
JERMOntology:Ion_trap
JERM:50007
Ion Trap
JERMOntology:Ionization_source
JERM:40009
Ionization Source
JERMOntology:Isotope_ratio_mass_spectrometry
JERM:00124
Isotope Ratio Mass Spectrometry
JERMOntology:Label
JERM:24776
Label
JERMOntology:Limited_media_growth
JERM:007
Limited Media Growth
JERMOntology:Linear_equation
JERM:00140
Linear Equation
JERMOntology:Liquid_chromatography-tandem_mass_spectrometry
JERM:00129
Liquid Chromatography-tandom Mass Spectrometry
JERMOntology:Liquid_chromatography_mass_spectrometry
JERM:00125
Liquid Chromatography Mass Spectrometry
JERMOntology:MAGE-TAB
JERM:91021
MAGE-TAB
JERMOntology:MAGEML
JERM:30184
MAGEML
JERMOntology:MALDI
JERM:50001
MALDI
JERMOntology:MALDI_TOF
JERM:00126
MALDI-TOF
JERMOntology:Mass
JERM:00030
Mass
JERMOntology:Mass_spec_file_format
JERM:40018
Mass Spectrometry File Format
JERMOntology:Mass_spectrometry
Mass spectrometry (MS) is an analytical technique for the determination of the elemental composition of a sample or molecule. It is used for elucidating the chemical structures of peptides and sometimes other chemical compounds
JERM:00099
Mass Spectrometry
JERMOntology:Material_entity
JERM:00198
Material Entity
JERMOntology:Mathematical_model_type
JERM:00103
Mathematical Model Type
JERMOntology:Measured_item
the entity under investigation (e.g. glucose)
JERM:00028
Measured Item
JERMOntology:Metabolic_network
JERM:00052
Metabolic Network
JERMOntology:Metabolic_redesign
JERM:00153
Metabolic Redesign
JERMOntology:Metabolism
JERM:00054
Metabolism
JERMOntology:Metabolite
JERM:016
Metabolite
JERMOntology:Metabolite_concentration
JERM:00148
Metabolite Concentration
JERMOntology:Metabolite_profiling
JERM:00067
Metabolite Profiling
JERMOntology:Metabolomics
the analysis of metabolism and the dynamic changes in concentration of small molecules and metabolites in different conditions
JERM:00065
Metabolomics
JERMOntology:Metabonomics
JERM:00071
quantitative metabolomics
Metabonomics
JERMOntology:Metagenomics
JERM:00208
Metagenomics
JERMOntology:Methylation_profiling
JERM:00091
Methylation Profiling
JERMOntology:Micro-electrophoresis
JERM:00213
Micro-electrophoresis
JERMOntology:MicroRNA_profiling
JERM:00092
MicroRNA Profiling
JERMOntology:Microarray
JERM:00100
Microarray
JERMOntology:Microarray_factors
JERM:38539
Micorarray Factors
JERMOntology:Microarray_file_format
JERM:37735
Microarray File Format
JERMOntology:Microscopy
JERM:00185
Microscopy
JERMOntology:Model
computational models developed by SEEK consortium members
JERM:00012
Model
JERMOntology:Model_analysis_type
a model analysis type is a model "assay" type to classify the information contained within the model. The categories correspond to the existing categories in JWS Onnline, a tool for model simmulation
JERM:00044
Model Analysis Type
JERMOntology:Model_execution_environment
JERM:00039
Model Execution Environment
JERMOntology:Model_format
JERM:00040
Model Format
JERMOntology:Molecule_labelling
techniques for labelling molecules to allow them to be detected in laboratory analyses
JERM:00101
Molecule Labelling
JERMOntology:NMR
JERM:00138
NMR
JERMOntology:Nature_protocols
JERM:00042
Nature Protocols
JERMOntology:Next_generation_sequencing
JERM:020
JERMOntology:Next_generation_sequencing_analysis
JERM:002
Next Generation Sequencing Analysis
JERMOntology:Normalization_method
JERM:62033
Normalization Method
JERMOntology:Optical_density
absorption
JERM:00034
Optical Density
JERMOntology:Optical_density_600
JERM:014
Optical Density 600
JERMOntology:Orbitrap_velos
JERM:00214
Orbitrap Velos
JERMOntology:Ordinary_differential_equation
JERM:00141
Ordinary Differential Equation
JERMOntology:Organism
JERM:00029
Organism
JERMOntology:Organism_colony
JERM:00205
Organism Colony
JERMOntology:Organism_or_strain_characterisation
experiments to differentiate between different species or strains by their functional properties or genetic profiles
JERM:003
Organism or Strain Characteristics
JERMOntology:PCR
the polymerase chain reaction (PCR) is a technique to amplify a single or few copies of a piece of DNA across several orders of magnitude, generating thousands to millions of copies of a particular DNA sequence.
JERM:00093
PCR
JERMOntology:Partial_differential_equation
JERM:00142
Partial Differential Equation
JERMOntology:Pathway
JERM:40016
Pathway
JERMOntology:Peptide
JERM:50020
Peptide
JERMOntology:Person
a SEEK consortium member
JERM:00019
Person
JERMOntology:Physical_file_format
JERM:00193
Physical File Format
JERMOntology:Post-translational_modification
JERM:00074
Post-translational Modification
JERMOntology:Post_source_component
JERM:50002
Post Source Component
JERMOntology:Post_translational_modification
JERM:00212
Post Translational Modification
JERMOntology:Pressure
JERM:90001
Pressure
pressure
JERMOntology:Primer_design
JERM:00062
Primer Design
JERMOntology:Programme
Multiple scientific investigations from the same funding initiative
Programme
JERMOntology:Progressive_curve_experiment
JERM:00118
Progressive Curve Experiment
JERMOntology:Project
Scientific investigations into a particular biological or computational research question, involving one or more research groups
JERM:00020
Project
JERMOntology:Protein
JERM:40017
Protein
JERMOntology:Protein-protein_interaction
JERM:00075
Protein-protein Interaction
JERMOntology:Protein-protein_interaction_profiling
JERM:00064
Protein-Protein Interaction Profiling
JERMOntology:Protein_expression_profiling
JERM:00076
Protein Expression Profiling
JERMOntology:Protein_identification
JERM:00077
Protein Identification
JERMOntology:Protein_purification
JERM:00078
Protein Purification
JERMOntology:Protein_quantification
JERM:00152
Protein Quantification
JERMOntology:Protein_structural_analysis
JERM:00079
Protein Structural Analysis
JERMOntology:Proteomics
Proteomics is the study of the function and structure of proteins in an organism, predominantly using high-throughput techniques
JERM:00072
Proteomics
JERMOntology:Proteomics_factors
JERM:40008
Proteomics Factors
JERMOntology:Proteomics_file_format
JERM:40017
Proteomics File Format
JERMOntology:Protocol
The specification of a laboratory or computational procedure that contains enough detail to enable scientists to rerun that procedure or at least understand and evaluate the method
JERM:00145
Protocol
JERMOntology:Publication
publication abstracts relating to other SEEK assets
JERM:00014
Publication
JERMOntology:Quality_control_type
JERM:87160
Quality Control Type
JERMOntology:Quantitation
JERM:50009
Quantitation
JERMOntology:RNA-Seq
JERM:019
JERMOntology:RNA-seq_profiling
RNA-SEQ, or Whole Transcriptome Shotgun Sequencing, allows the sequencing of cDNA in order to deterimine RNA content. RNA-Seq_analysis are experiments that make use of such data.
JERM:001
RNA-seq Profiling
JERMOntology:RNAi
experiments involving RNA Interference
JERM:00087
RNAi
JERMOntology:Radioactive_labelling
JERM:00136
Radioactive Labelling
JERMOntology:Reactomics
the study of biochemical reactions in the cell
JERM:00080
Reactomics
JERMOntology:Replicate_type
JERM:50925
Replicate Type
JERMOntology:SBML_format
JERM:40021
SBML
JERMOntology:SBML_model
Computational models in SBML format
JERM:40003
JERMOntology:SDS_PAGE
JERM:00116
sodium dodecyl sulfate polyacrylamide gel electrophoresis
SDS-PAGE
JERMOntology:SELDI_TOF
JERM:00127
SELDI-TOF
JERMOntology:SNP_array
JERM:50017
SNP Array
JERMOntology:SNP_detection
JERM:00059
SNP Detection
JERMOntology:SOP
Standard operating procedures and protocols - experimental methods that have been agreed and standardised across a project or organisation
JERM:00015
SOP
JERMOntology:SOP_file_format
JERM:00041
SOP File Format
JERMOntology:Sample
JERM:69863
Sample
JERMOntology:Sample_preparation_protocol
describes the treatments and conditions applied at the time of sampling
JERM:00146
Sample Preperation Protocol
JERMOntology:Sequencing
techniques for determining the DNA or protein sequence
JERM:017
Sequencing
JERMOntology:Signal_transduction
JERM:00053
Signal Induction
JERMOntology:Simulation_data
JERM:00217
Simulation Data
JERMOntology:Single_Nucleotide_Polymorphism
JERM:00166
Single Nucleotide Polymorphism
JERMOntology:Single_cell
analysing the response of single cells to stimuli and perturbations by fluorescence and imaging
JERM:00084
Single Cell
JERMOntology:Small_molecule_microarray
JERM:00134
Small Molecule Microarray
JERMOntology:Software
computer programs used for data analysis or curation
JERM:40005
Software
JERMOntology:Specific_concentration
JERM:00032
Specific Concentration
JERMOntology:Spectrophotometry
JERM:00191
Spectrophotometry
JERMOntology:Spectrum_generation
JERM:40010
Spectrum Generation
JERMOntology:Spectrum_interpretation
JERM:40011
Spectrum Interpretation
JERMOntology:Strain
JERM:00204
Strain
JERMOntology:Stress_response
Stress_response or adaptation
JERM:00154
Stress Response
JERMOntology:Structural_methods
JERM:00102
Structural Methods
JERMOntology:Study
a collection of experiments designed to answer a particular biological question
JERM:00023
Study
JERMOntology:Substrate_utilization
JERM:005
Substrate Utilization
JERMOntology:Surface_plasmon_resonance
JERM:00107
Surface Plasmon Resonance
JERMOntology:Tandem_mass_spectrometry
JERM:00128
Tandem Mass Spectrometry
JERMOntology:Technology_type
describes the technologies and/or techniques used in performing experiments
JERM:00025
Technology Type
JERMOntology:Temperature
JERM:00036
Temperature
JERMOntology:Tiling_array
JERM:50016
Tiling Array
JERMOntology:Tiling_path
JERM:00092
Tiling Path
JERMOntology:Time_of_flight_drift_tube
JERM:50008
Time of Flight Drift Tube
JERMOntology:Time_series
JERM:00183
Time Series
JERMOntology:Transcriptional_analysis
JERM:00211
Transcriptional Analysis
JERMOntology:Transcriptional_profiling
also called cDNA Microarray
JERM:00089
Transcriptional Profiling
JERMOntology:Transcriptomics
The study of the transcriptome, the complete set of RNA transcripts produced by the genome at any one time
JERM:00085
Transcriptomics
JERMOntology:Translation
JERM:00055
Translation
JERMOntology:Translational_profiling
The genome-wide measure of the nascent proteome
JERM:00090
Translational Profiling
JERMOntology:UPLC
Ultra Performance Liquid Chromatography
Liquid chromatography (LC) is a separation technique in which the mobile phase is a liquid
JERM:00109
Ultra Performance Liquid Chromatography
UPLC
JERMOntology:Volume
JERM:110000
Volume
JERMOntology:Western_blot
JERM:00190
Western Blot
JERMOntology:aerobic
JERM:00175
Aerobic
JERMOntology:anaerobic
JERM:00176
Anaerobic
JERMOntology:autoCarbonSource
Auto Carbon Response
JERMOntology:biofilm
JERM:00206
Biofilm
JERMOntology:carbonSourcePhenotype
Carbon Source Phenotype
JERMOntology:cell
JERM:00199
Cell
JERMOntology:cell_type
JERM:00157
Cell Type
JERMOntology:chemoenergy
Chemo Energy
JERMOntology:deletion
JERM:00164
Deletion
JERMOntology:developmentalStage
JERM:00158
Developmental Stage
JERMOntology:diploid
JERM:00171
Diploid
JERMOntology:disease_state
JERM:00159
Disease State
JERMOntology:electronDonorPhenotype
Electron Donor Phenotype
JERMOntology:energySourcePhenotype
Energy Source Phenotype
JERMOntology:experimental_assay
JERM:00194
Experimental Assay
JERMOntology:explantation
JERM:00160
Explanation
JERMOntology:fermentation
JERM:00177
Fermentation
JERMOntology:genotype
A genotype is a variant genome, complete or incomplete - definition from the Sequence Ontology
JERM:00161
Genotype
JERMOntology:haploid
JERM:00172
Haploid
JERMOntology:heteroCarbonSource
Hetero Carbon Source
JERMOntology:hexaploid
JERM:00173
Hexaploid
JERMOntology:informatics_analysis
JERM:00195
Informatics Analysis
JERMOntology:informatics_analysis_type
an informatics analysis is an "assay" performed in silico, employing informatics techniques to analyse data
JERM:00045
Informatics Assay Type
JERMOntology:insertion
JERM:00165
Insertion
JERMOntology:lithoElectronDonor
Litho Electron Donor
JERMOntology:material_type
JERM:00162
links to CV in MGED and others
Material Type
JERMOntology:miRNA_microarray
JERM:00133
miRNA Microarray
JERMOntology:modelling_analysis
JERM:00196
Modelling Analysis
JERMOntology:mutationType
JERM:00163
Mutation Type
JERMOntology:organ
JERM:00203
Organ
JERMOntology:organ_type
JERM:00167
Organ Type
JERMOntology:organism_part
JERM:00168
links to CV in MGED and others
Organism Part
JERMOntology:organoElectronDonor
Organo Electron Donor
JERMOntology:pH
JERM:00035
pH
JERMOntology:phenotype
JERM:00169
Phenotype
JERMOntology:photoEnergy
Photo Energy
JERMOntology:ploidy
JERM:00170
Ploidy
JERMOntology:process
experimental procedures
JERM:00016
Process
JERMOntology:qPCR
quantitative real time polymerase chain reaction (Q-PCR/qPCR) or kinetic polymerase chain reaction, is based on PCR and is used to amplify and simultaneously quantify a targeted DNA molecule
JERM:00104
also known as real-time PCR or quantative PCR
qPCR
JERMOntology:qRT-PCR
Reverse transcription polymerase chain reaction (RT-PCR) is a variant of polymerase chain reaction (PCR). In RT-PCR an RNA strand is first reverse transcribed into its DNA complement (complementary DNA, or cDNA) using the enzyme reverse transcriptase, and the resulting cDNA is amplified using traditional or real-time PCR.
JERM:00105
Real-time reverse-transcription PCR, qRT-PCR
qRT-PCR
JERMOntology:respiration
JERM:00174
Respiration
JERMOntology:semi-aerobic
JERM:00178
Semi-aerobic
JERMOntology:tissue
JERM:00207
Tissue
JERMOntology:tissue_type
JERM:00180
Tissue Type
JERMOntology:treatment
JERM:00197
Treatment
JERMOntology:turbidostat
a continuous culture device that has feedback between the turbidity of the culture vessel and the dilution rate
JERM:023
Turboidostat
JERMOntology2:C_radiolabelling
JERM:00137
JERM:00215
JERMOntology3:D_gel_electrophoresis
JERM:00115
2D Gel Electrophoresis
JERMOntology4:hybrid_system
Two-hybrid screening (also known as yeast two-hybrid system or Y2H) is a molecular biology technique used to discover protein-protein interactions and protein-DNA interactions by testing for physical interactions
JERM:00106
yeast 2 hybrid
2-hybrid System
JERM:00179
Sex / Gender
owl:Thing