#Accelerator_mass_spectrometry
JERM:00120
#Accelerator_mass_spectrometry
Accelerator Mass Spectrometry
#Activity
JERM:110001
#Activity
Activity
#Affinity_chromatography
Affinity chromatography is based on selective non-covalent interaction between an analyte and specific molecules.
It is often used in biochemistry in the purification of proteins bound to tags. These fusion proteins are labeled with compounds such as His-tags, biotin or antigens, which bind to the stationary phase specifically.
#Affinity_chromatography
JERM:00110
#Affinity_chromatography
affinity_purification
#Affinity_chromatography
Affinity Chromatography
#Algebraic_equation
JERM:00139
#Algebraic_equation
Algebraic Equation
#Amplification
e.g. RT_PCR to amplify DNA from RNA
#Amplification
JERM:000007
#Amplification
Amplification
#Assay
An assay is a combination of a process (experiment) and a protocol.
#Assay
JERM:00021
#Assay
Assay
#Assay_type
An assay type describes the type of experiment being performed
#Assay_type
JERM:00024
#Assay_type
The assay_type hierarchy allows scientists to categorise their experimental assays, informatics analyses and computational models
#Assay_type
Assay Type
#Asset
all shareable entities in the SEEK are kinds of Assets
#Asset
JERM:00010
#Asset
Asset
#Bait_protein_tagging
JERM:00135
#Bait_protein_tagging
Bait Protein Tagging
#Batch
A large-scale closed system culture in which cells are grown in a fixed volume of nutrient culture medium under specific environmental conditions
#Batch
JERM:021
#Batch
Batch
#Binding
laboratory techniques which involve separation by binding the molecules of interest
#Binding
JERM:00094
#Binding
Binding
#Bioinformatics_analysis
a bioinformatics analysis is an "assay" performed in silico, employing bioinformatics techniques to analyse biological data
#Bioinformatics_analysis
JERM:00046
#Bioinformatics_analysis
Bioinformatics Analysis
#Biological_entity
JERM:40012
#Biological_entity
Biological Entity
#Buffer
JERM:011
#Buffer
Buffer
#By-product_formation
JERM:004
#By-product_formation
By-product Formation
#Capillary_electrophoresis
JERM:00113
#Capillary_electrophoresis
Capillary Electrophoresis
#Catabolic_response
JERM:00068
#Catabolic_response
Catabolic Response
#CellML
JERM:40020
#CellML
CellML
#Cell_count
Cell Count
#Cell_cycle
JERM:00048
#Cell_cycle
Cell Cycle
#Cell_growth_optimisation
JERM:00066
#Cell_growth_optimisation
Cell Growth Optimisation
#Cell_growth_rate
JERM:00151
#Cell_growth_rate
Cell Growth Rate
#Cell_line
JERM:00201
#Cell_line
Cell Line
#Cell_size
JERM:006
#Cell_size
Cell Size
#ChIP-on-chip
JERM:00130
#ChIP-on-chip
Chromatin Immunoprecipitation on Chip
#ChIP-on-chip
ChIP-on-chip
#Characteristics_for_assay
JERM:00155
#Characteristics_for_assay
Characteristics for Assay
#Characteristics_for_sample
JERM:00156
#Characteristics_for_sample
Characteristics for Sample
#Cheminformatics_analysis
a cheminformatics analysis is an "assay" performed in silico, employing cheminformatics techniques to analyse biological data
#Cheminformatics_analysis
JERM:00047
#Cheminformatics_analysis
Cheminformatics Analysis
#Chemostat
a bioreactor to which fresh medium is continuously added, while culture liquid is continuously removed to keep the culture volume constant.
#Chemostat
JERM:022
#Chemostat
Chemostat
#Chemostat_measurements
JERM:00184
#Chemostat_measurements
Chemostat Measurement
#Chip-Seq
JERM:018
#Chromatography
Chromatography is the collective term for a set of laboratory techniques for the separation of mixtures. It involves passing a mixture dissolved in a "mobile phase" through a stationary phase, which separates the analyte to be measured from other molecules in the mixture based on differential partitioning between the mobile and stationary phases.
#Chromatography
JERM:00095
#Chromatography
Chromatography
#Collision_cell
JERM:50003
#Collision_cell
Collision Cell
#Community_standard_specification
JERM:00192
#Community_standard_specification
Community Standard Specification
#Comparative_genomic_hybridization
JERM:00086
#Comparative_genomic_hybridization
Comparative Genomic Hybridization
#Comparative_genomics
JERM:00060
#Comparative_genomics
Comparative Genomics
#Compound
JERM:015
#Compound
Compound
#Concentration
JERM:00031
#Concentration
Concentration
#Continuous_enzymatic
JERM:008
#Continuous_enzymatic
Continuous Enzymatic
#Cultivation_experiment
JERM:00216
#Cultivation_experiment
Cultivation Experiment
#CultureGrowthType
Experiments can be performed on cell cultures, so it is essential to record the type of culture in use each time
#CultureGrowthType
JERM:00026
#CultureGrowthType
Culture Growth Type
#Custom_Array
JERM:00132
#Custom_Array
Custom Array
#DNA_Methylation
JERM:00131
#DNA_Methylation
DNA Methylation
#DNA_sequencing
JERM:00058
#DNA_sequencing
DNA Sequencing
#Data
SEEK data files
#Data
JERM:00011
#Data
Data
#Data_file_format
JERM:00038
#Data_file_format
Data File Format
#Data_sample
An electronic description of a sample that can be used to derive a physical sample, for example a DNA sequence
#Data_sample
JERM:00144
#Data_sample
Data Sample
#Detectors
JERM:50004
#Detectors
Detectors
#Dilution_rate
Dilution Rate
#Discontinuous_enzymatic
JERM:009
#Discontinuous_enzymatic
Discontinuous Enzymatic
#Dry_biomass
JERM:00037
#Dry_biomass
Dry Biomass
#ELISA
JERM:00188
#ELISA
ELISA
#Electron_scanning_microscopy
JERM:00186
#Electrophoresis
Electrophoresis is the motion of dispersed particles relative to a fluid under the influence of a spatially uniform electric field
#Electrophoresis
JERM:00096
#Electrophoresis
Electrophoresis
#ElectrosprayIonisation
JERM:50000
#ElectrosprayIonisation
Electrospray Ionisation
#Enzymatic_activity_measurements
JERM:00097
#Enzymatic_activity_measurements
Enzymatic Activity Measurements
#Enzymatic_assay
JERM:00083
#Enzymatic_assay
Enzymatic Assay
#Enzyme
JERM:501000
#Enzyme
Enzyme
#Enzyme_activity
JERM:012
#Enzyme_activity
Enzyme Activity
#Enzymology
JERM:00049
#Enzymology
Enzymology
#Equipment
tools or machines used in the laboratory, or computer hardware or software used for data analysis
#Equipment
JERM:90004
#Equipment
Equipment
#Exon_array
JERM:50015
#Exon_array
Exon Array
#Experimental_assay_type
JERM:00043
#Experimental_assay_type
An experimental assay is an assay carried out in a laboratory
#Experimental_assay_type
Experimental Assay Type
#Experimental_design_type
JERM:58493
#Experimental_design_type
Experimental Design Type
#Experimental_factor_type
JERM:26754
#Experimental_factor_type
Experimental Factory Type
#Experimental_factors
ExperimentalFactors are descriptors of the properties of the experiment. How the culture was prepared, what organism they are from, and what type of experiment was run
#Experimental_factors
JERM:00017
#Experimental_factors
Experimental Factors
#Expression
JERM:00033
#Expression
Expression
#Expression_value_measurement_type
JERM:20946
#Expression_value_measurement_type
Expression Value Measurement
#Extracellular_concentration
JERM:000001
#Extracellular_concentration
Extracellular Concentration
#Extracellular_metabolite_concentration
JERM:00149
#Extracellular_metabolite_concentration
Extracellular Metabolite Concentration
#FACS
Fluorescence Activated Cell Sorting
#FACS
JERM:90002
#FACS
FACS
#FRAP
JERM:00119
#FRAP
fluorescence recovery after photobleaching
#FRAP
FRAP
#FT-ICR
JERM:50005
#FT-ICR
FT-ICR
#Factors_studied
factors studied describe what types of measurements were taken (i.e. what factors were expected to change during the experiment)
#Factors_studied
JERM:00027
#Factors_studied
also known as ExperimentalConditions when used to set up initial conditions for an experiment/assay
#Factors_studied
Factors Studied
#Flow_cytometry
JERM:90003
#Flow_cytometry
Flow Cytometry
#Flux_balance_analysis
a method for analysing the flow of metabolites through metabolic networks
#Flux_balance_analysis
JERM:00069
#Flux_balance_analysis
Flux Balance Analysis
#Fluxomics
the dynamic changes of molecules within a cell over time
#Fluxomics
JERM:00056
#Fluxomics
Fluxomics
#Format
JERM:00018
#Format
Format
#Functional_biological_entity
JERM:40014
#Functional_biological_entity
Functional Biological Entity
#Gas_chromatography
Gas chromatography (GC) is a separation technique in which the mobile phase is a gas
#Gas_chromatography
JERM:00111
#Gas_chromatography
Gas Chromatography
#Gas_chromatography_mass_spectrometry
JERM:00121
#Gas_chromatography_mass_spectrometry
Gas Chromatography Mass Spectrometry
#Gas_flow
JERM:110002
#Gas_flow
Gas Flow
#Gel_electrophoresis
JERM:00114
#Gel_electrophoresis
Gel Electrophoresis
#Gel_filtration
Size exclusion chromatography (SEC), also known as gel permeation chromatography or gel filtration chromatography, separates particles on the basis of size. It is generally a low resolution chromatography and thus it is often reserved for the final, "polishing" step of a purification. It is also useful for determining the tertiary structure and quaternary structure of purified proteins.
#Gel_filtration
JERM:00112
#Gel_filtration
size_exclusion_chromatography
#Gel_filtration
Gel Filtration
#Gene
JERM:40015
#Gene
Gene
#Gene_expression
JERM:00050
#Gene_expression
Gene Expression
#Gene_expression_profiling
analysing the gene expression across an organism in particular environmental conditions
#Gene_expression_profiling
JERM:00088
#Gene_expression_profiling
Gene Expression Profiling
#Gene_regulatory_network
JERM:00051
#Gene_regulatory_network
Gene Regulatory Network
#Genome
JERM:00202
#Genome
Genome
#Genome-scale_enzyme_activity_profiling
JERM:00081
#Genome-scale_enzyme_activity_profiling
Genome-scale Enzyme Activity Profiling
#Genome_scale
JERM:010
#Genome_scale
Genome Scale
#Genome_wide_association
JERM:00209
#Genome_wide_association
Genome Wide Association
#Genomics
the study of the genome of an organism
#Genomics
JERM:00057
#Genomics
Genomics
#Genotyping
JERM:00061
#Genotyping
Genotyping
#Glucose_pulse
JERM:00070
#Glucose_pulse
Glucose Pulse
#Growth_medium_composition
JERM:013
#Growth_medium_composition
Growth Medium Composition
#Growth_rate
JERM:00181
#Growth_rate
Growth Rate
#HPLC
High Performance Liquid Chromatography.
Liquid chromatography (LC) is a separation technique in which the mobile phase is a liquid
#HPLC
JERM:00108
#HPLC
High Performance Liquid Chromatography
#HPLC
HPLC
#Hybridization
JERM:44538
#Hybridization
Hybridization
#Imaging
JERM:00098
#Imaging
Imaging
#Immune_precipitation
JERM:00073
#Immune_precipitation
Immune Precipitation
#Immuno_electron_microscopy
JERM:00189
#Immuno_electron_microscopy
Immuno Electron Microscopy
#Immunoassay
JERM:00147
#Immunoassay
Immunoassay
#Immunostaining
JERM:00187
#Immunostaining
Immunostaining
#Inductively_coupled_plasma_mass_spectrometry
JERM:00122
#Inductively_coupled_plasma_mass_spectrometry
Inductively Coupled Plasma Mass Spectrometry
#Information_entity
JERM:00143
#Information_entity
Information Entity
#Initial_rate_experiment
JERM:00117
#Initial_rate_experiment
Initial Rate Experiment
#Inoculation_density
JERM:00182
#Inoculation_density
Inoculation Density
#Instrument
machines or tools used in laboratory experiments
#Instrument
JERM:40004
#Instrument
Instrument
#Interactomics
the study of the network of interactions between proteins, metabolites and other biological objects in the cell, and the consequences of those interactions
#Interactomics
JERM:00063
#Interactomics
Interactomics
#Intracellular_concentration
JERM:000002
#Intracellular_concentration
Intracellular Concentration
#Intracellular_metabolite_Concentration
JERM:00150
#Intracellular_metabolite_Concentration
Intracellular Metabolite Concentration
#Investigation
A high level description of the experimental work undertaken
#Investigation
JERM:00022
#Investigation
Investigation
#Ion_mobility_spectrometry_mass_spectrometry
JERM:00123
#Ion_mobility_spectrometry_mass_spectrometry
Ion Mobility Spectrometry Mass Spectrometry
#Ion_optics
JERM:50006
#Ion_optics
Ion Optics
#Ion_trap
JERM:50007
#Ion_trap
Ion Trap
#Ionization_source
JERM:40009
#Ionization_source
Ionization Source
#Isotope_ratio_mass_spectrometry
JERM:00124
#Isotope_ratio_mass_spectrometry
Isotope Ratio Mass Spectrometry
#Label
JERM:24776
#Label
Label
#Limited_media_growth
JERM:007
#Limited_media_growth
Limited Media Growth
#Linear_equation
JERM:00140
#Linear_equation
Linear Equation
#Liquid_chromatography-tandem_mass_spectrometry
JERM:00129
#Liquid_chromatography-tandem_mass_spectrometry
Liquid Chromatography-tandom Mass Spectrometry
#Liquid_chromatography_mass_spectrometry
JERM:00125
#Liquid_chromatography_mass_spectrometry
Liquid Chromatography Mass Spectrometry
#MAGE-TAB
JERM:91021
#MAGE-TAB
MAGE-TAB
#MAGEML
JERM:30184
#MAGEML
MAGEML
#MALDI
JERM:50001
#MALDI
MALDI
#MALDI_TOF
JERM:00126
#MALDI_TOF
MALDI-TOF
#Mass
JERM:00030
#Mass
Mass
#Mass_spec_file_format
JERM:40018
#Mass_spec_file_format
Mass Spectrometry File Format
#Mass_spectrometry
Mass spectrometry (MS) is an analytical technique for the determination of the elemental composition of a sample or molecule. It is used for elucidating the chemical structures of peptides and sometimes other chemical compounds
#Mass_spectrometry
JERM:00099
#Mass_spectrometry
Mass Spectrometry
#Material_entity
JERM:00198
#Material_entity
Material Entity
#Mathematical_model_type
JERM:00103
#Mathematical_model_type
Mathematical Model Type
#Measured_item
the entity under investigation (e.g. glucose)
#Measured_item
JERM:00028
#Measured_item
Measured Item
#Metabolic_network
JERM:00052
#Metabolic_network
Metabolic Network
#Metabolic_redesign
JERM:00153
#Metabolic_redesign
Metabolic Redesign
#Metabolism
JERM:00054
#Metabolism
Metabolism
#Metabolite
JERM:016
#Metabolite
Metabolite
#Metabolite_concentration
JERM:00148
#Metabolite_concentration
Metabolite Concentration
#Metabolite_profiling
JERM:00067
#Metabolite_profiling
Metabolite Profiling
#Metabolomics
the analysis of metabolism and the dynamic changes in concentration of small molecules and metabolites in different conditions
#Metabolomics
JERM:00065
#Metabolomics
Metabolomics
#Metabonomics
JERM:00071
#Metabonomics
quantitative metabolomics
#Metabonomics
Metabonomics
#Metagenomics
JERM:00208
#Metagenomics
Metagenomics
#Methylation_profiling
JERM:00091
#Methylation_profiling
Methylation Profiling
#Micro-electrophoresis
JERM:00213
#Micro-electrophoresis
Micro-electrophoresis
#MicroRNA_profiling
JERM:00092
#MicroRNA_profiling
MicroRNA Profiling
#Microarray
JERM:00100
#Microarray
Microarray
#Microarray_factors
JERM:38539
#Microarray_factors
Micorarray Factors
#Microarray_file_format
JERM:37735
#Microarray_file_format
Microarray File Format
#Microscopy
JERM:00185
#Microscopy
Microscopy
#Model
computational models developed by SEEK consortium members
#Model
JERM:00012
#Model
Model
#Model_analysis_type
a model analysis type is a model "assay" type to classify the information contained within the model. The categories correspond to the existing categories in JWS Onnline, a tool for model simmulation
#Model_analysis_type
JERM:00044
#Model_analysis_type
Model Analysis Type
#Model_execution_environment
JERM:00039
#Model_execution_environment
Model Execution Environment
#Model_format
JERM:00040
#Model_format
Model Format
#Molecule_labelling
techniques for labelling molecules to allow them to be detected in laboratory analyses
#Molecule_labelling
JERM:00101
#Molecule_labelling
Molecule Labelling
#NMR
JERM:00138
#NMR
NMR
#Nature_protocols
JERM:00042
#Nature_protocols
Nature Protocols
#Next_generation_sequencing
JERM:020
#Next_generation_sequencing_analysis
JERM:002
#Next_generation_sequencing_analysis
Next Generation Sequencing Analysis
#Normalization_method
JERM:62033
#Normalization_method
Normalization Method
#Optical_density
absorption
#Optical_density
JERM:00034
#Optical_density
Optical Density
#Optical_density_600
JERM:014
#Optical_density_600
Optical Density 600
#Orbitrap_velos
JERM:00214
#Orbitrap_velos
Orbitrap Velos
#Ordinary_differential_equation
JERM:00141
#Ordinary_differential_equation
Ordinary Differential Equation
#Organism
JERM:00029
#Organism
Organism
#Organism_colony
JERM:00205
#Organism_colony
Organism Colony
#Organism_or_strain_characterisation
experiments to differentiate between different species or strains by their functional properties or genetic profiles
#Organism_or_strain_characterisation
JERM:003
#Organism_or_strain_characterisation
Organism or Strain Characteristics
#PCR
the polymerase chain reaction (PCR) is a technique to amplify a single or few copies of a piece of DNA across several orders of magnitude, generating thousands to millions of copies of a particular DNA sequence.
#PCR
JERM:00093
#PCR
PCR
#Partial_differential_equation
JERM:00142
#Partial_differential_equation
Partial Differential Equation
#Pathway
JERM:40016
#Pathway
Pathway
#Peptide
JERM:50020
#Peptide
Peptide
#Person
a SEEK consortium member
#Person
JERM:00019
#Person
Person
#Physical_file_format
JERM:00193
#Physical_file_format
Physical File Format
#Post-translational_modification
JERM:00074
#Post-translational_modification
Post-translational Modification
#Post_source_component
JERM:50002
#Post_source_component
Post Source Component
#Post_translational_modification
JERM:00212
#Post_translational_modification
Post Translational Modification
#Pressure
JERM:90001
#Pressure
Pressure
#Pressure
pressure
#Primer_design
JERM:00062
#Primer_design
Primer Design
#Programme
Multiple scientific investigations from the same funding initiative
#Programme
Programme
#Progressive_curve_experiment
JERM:00118
#Progressive_curve_experiment
Progressive Curve Experiment
#Project
Scientific investigations into a particular biological or computational research question, involving one or more research groups
#Project
JERM:00020
#Project
Project
#Protein
JERM:40017
#Protein
Protein
#Protein-protein_interaction
JERM:00075
#Protein-protein_interaction
Protein-protein Interaction
#Protein-protein_interaction_profiling
JERM:00064
#Protein-protein_interaction_profiling
Protein-Protein Interaction Profiling
#Protein_expression_profiling
JERM:00076
#Protein_expression_profiling
Protein Expression Profiling
#Protein_identification
JERM:00077
#Protein_identification
Protein Identification
#Protein_purification
JERM:00078
#Protein_purification
Protein Purification
#Protein_quantification
JERM:00152
#Protein_quantification
Protein Quantification
#Protein_structural_analysis
JERM:00079
#Protein_structural_analysis
Protein Structural Analysis
#Proteomics
Proteomics is the study of the function and structure of proteins in an organism, predominantly using high-throughput techniques
#Proteomics
JERM:00072
#Proteomics
Proteomics
#Proteomics_factors
JERM:40008
#Proteomics_factors
Proteomics Factors
#Proteomics_file_format
JERM:40017
#Proteomics_file_format
Proteomics File Format
#Protocol
The specification of a laboratory or computational procedure that contains enough detail to enable scientists to rerun that procedure or at least understand and evaluate the method
#Protocol
JERM:00145
#Protocol
Protocol
#Publication
publication abstracts relating to other SEEK assets
#Publication
JERM:00014
#Publication
Publication
#Quality_control_type
JERM:87160
#Quality_control_type
Quality Control Type
#Quantitation
JERM:50009
#Quantitation
Quantitation
#RNA-Seq
JERM:019
#RNA-seq_profiling
RNA-SEQ, or Whole Transcriptome Shotgun Sequencing, allows the sequencing of cDNA in order to deterimine RNA content. RNA-Seq_analysis are experiments that make use of such data.
#RNA-seq_profiling
JERM:001
#RNA-seq_profiling
RNA-seq Profiling
#RNAi
experiments involving RNA Interference
#RNAi
JERM:00087
#RNAi
RNAi
#Radioactive_labelling
JERM:00136
#Radioactive_labelling
Radioactive Labelling
#Reactomics
the study of biochemical reactions in the cell
#Reactomics
JERM:00080
#Reactomics
Reactomics
#Replicate_type
JERM:50925
#Replicate_type
Replicate Type
#SBML_format
JERM:40021
#SBML_format
SBML
#SBML_model
Computational models in SBML format
#SBML_model
JERM:40003
#SDS_PAGE
JERM:00116
#SDS_PAGE
sodium dodecyl sulfate polyacrylamide gel electrophoresis
#SDS_PAGE
SDS-PAGE
#SELDI_TOF
JERM:00127
#SELDI_TOF
SELDI-TOF
#SNP_array
JERM:50017
#SNP_array
SNP Array
#SNP_detection
JERM:00059
#SNP_detection
SNP Detection
#SOP
Standard operating procedures and protocols - experimental methods that have been agreed and standardised across a project or organisation
#SOP
JERM:00015
#SOP
SOP
#SOP_file_format
JERM:00041
#SOP_file_format
SOP File Format
#Sample
JERM:69863
#Sample
Sample
#Sample_preparation_protocol
describes the treatments and conditions applied at the time of sampling
#Sample_preparation_protocol
JERM:00146
#Sample_preparation_protocol
Sample Preperation Protocol
#Sequencing
techniques for determining the DNA or protein sequence
#Sequencing
JERM:017
#Sequencing
Sequencing
#Signal_transduction
JERM:00053
#Signal_transduction
Signal Induction
#Simulation_data
JERM:00217
#Simulation_data
Simulation Data
#Single_Nucleotide_Polymorphism
JERM:00166
#Single_Nucleotide_Polymorphism
Single Nucleotide Polymorphism
#Single_cell
analysing the response of single cells to stimuli and perturbations by fluorescence and imaging
#Single_cell
JERM:00084
#Single_cell
Single Cell
#Small_molecule_microarray
JERM:00134
#Small_molecule_microarray
Small Molecule Microarray
#Software
computer programs used for data analysis or curation
#Software
JERM:40005
#Software
Software
#Specific_concentration
JERM:00032
#Specific_concentration
Specific Concentration
#Spectrophotometry
JERM:00191
#Spectrophotometry
Spectrophotometry
#Spectrum_generation
JERM:40010
#Spectrum_generation
Spectrum Generation
#Spectrum_interpretation
JERM:40011
#Spectrum_interpretation
Spectrum Interpretation
#Strain
JERM:00204
#Strain
Strain
#Stress_response
Stress_response or adaptation
#Stress_response
JERM:00154
#Stress_response
Stress Response
#Structural_methods
JERM:00102
#Structural_methods
Structural Methods
#Study
a collection of experiments designed to answer a particular biological question
#Study
JERM:00023
#Study
Study
#Substrate_utilization
JERM:005
#Substrate_utilization
Substrate Utilization
#Surface_plasmon_resonance
JERM:00107
#Surface_plasmon_resonance
Surface Plasmon Resonance
#Tandem_mass_spectrometry
JERM:00128
#Tandem_mass_spectrometry
Tandem Mass Spectrometry
#Technology_type
describes the technologies and/or techniques used in performing experiments
#Technology_type
JERM:00025
#Technology_type
Technology Type
#Temperature
JERM:00036
#Temperature
Temperature
#Tiling_array
JERM:50016
#Tiling_array
Tiling Array
#Tiling_path
JERM:00092
#Tiling_path
Tiling Path
#Time_of_flight_drift_tube
JERM:50008
#Time_of_flight_drift_tube
Time of Flight Drift Tube
#Time_series
JERM:00183
#Time_series
Time Series
#Transcriptional_analysis
JERM:00211
#Transcriptional_analysis
Transcriptional Analysis
#Transcriptional_profiling
also called cDNA Microarray
#Transcriptional_profiling
JERM:00089
#Transcriptional_profiling
Transcriptional Profiling
#Transcriptomics
The study of the transcriptome, the complete set of RNA transcripts produced by the genome at any one time
#Transcriptomics
JERM:00085
#Transcriptomics
Transcriptomics
#Translation
JERM:00055
#Translation
Translation
#Translational_profiling
The genome-wide measure of the nascent proteome
#Translational_profiling
JERM:00090
#Translational_profiling
Translational Profiling
#UPLC
Ultra Performance Liquid Chromatography
Liquid chromatography (LC) is a separation technique in which the mobile phase is a liquid
#UPLC
JERM:00109
#UPLC
Ultra Performance Liquid Chromatography
#UPLC
UPLC
#Volume
JERM:110000
#Volume
Volume
#Western_blot
JERM:00190
#Western_blot
Western Blot
#aerobic
JERM:00175
#aerobic
Aerobic
#anaerobic
JERM:00176
#anaerobic
Anaerobic
#autoCarbonSource
Auto Carbon Response
#biofilm
JERM:00206
#biofilm
Biofilm
#carbonSourcePhenotype
Carbon Source Phenotype
#cell
JERM:00199
#cell
Cell
#cell_type
JERM:00157
#cell_type
Cell Type
#chemoenergy
Chemo Energy
#deletion
JERM:00164
#deletion
Deletion
#developmentalStage
JERM:00158
#developmentalStage
Developmental Stage
#diploid
JERM:00171
#diploid
Diploid
#disease_state
JERM:00159
#disease_state
Disease State
#electronDonorPhenotype
Electron Donor Phenotype
#energySourcePhenotype
Energy Source Phenotype
#experimental_assay
JERM:00194
#experimental_assay
Experimental Assay
#explantation
JERM:00160
#explantation
Explanation
#fermentation
JERM:00177
#fermentation
Fermentation
#genotype
A genotype is a variant genome, complete or incomplete - definition from the Sequence Ontology
#genotype
JERM:00161
#genotype
Genotype
#haploid
JERM:00172
#haploid
Haploid
#heteroCarbonSource
Hetero Carbon Source
#hexaploid
JERM:00173
#hexaploid
Hexaploid
#informatics_analysis
JERM:00195
#informatics_analysis
Informatics Analysis
#informatics_analysis_type
an informatics analysis is an "assay" performed in silico, employing informatics techniques to analyse data
#informatics_analysis_type
JERM:00045
#informatics_analysis_type
Informatics Assay Type
#insertion
JERM:00165
#insertion
Insertion
#instrumentModel
instrumentModel
#lithoElectronDonor
Litho Electron Donor
#manufacturer
manufacturer
#material_type
JERM:00162
#material_type
links to CV in MGED and others
#material_type
Material Type
#miRNA_microarray
JERM:00133
#miRNA_microarray
miRNA Microarray
#modelling_analysis
JERM:00196
#modelling_analysis
Modelling Analysis
#mutationType
JERM:00163
#mutationType
Mutation Type
#organ
JERM:00203
#organ
Organ
#organ_type
JERM:00167
#organ_type
Organ Type
#organism_part
JERM:00168
#organism_part
links to CV in MGED and others
#organism_part
Organism Part
#organoElectronDonor
Organo Electron Donor
#pH
JERM:00035
#pH
pH
#phenotype
JERM:00169
#phenotype
Phenotype
#photoEnergy
Photo Energy
#ploidy
JERM:00170
#ploidy
Ploidy
#process
experimental procedures
#process
JERM:00016
#process
Process
#qPCR
quantitative real time polymerase chain reaction (Q-PCR/qPCR) or kinetic polymerase chain reaction, is based on PCR and is used to amplify and simultaneously quantify a targeted DNA molecule
#qPCR
JERM:00104
#qPCR
also known as real-time PCR or quantative PCR
#qPCR
qPCR
#qRT-PCR
Reverse transcription polymerase chain reaction (RT-PCR) is a variant of polymerase chain reaction (PCR). In RT-PCR an RNA strand is first reverse transcribed into its DNA complement (complementary DNA, or cDNA) using the enzyme reverse transcriptase, and the resulting cDNA is amplified using traditional or real-time PCR.
#qRT-PCR
JERM:00105
#qRT-PCR
Real-time reverse-transcription PCR, qRT-PCR
#qRT-PCR
qRT-PCR
#respiration
JERM:00174
#respiration
Respiration
#semi-aerobic
JERM:00178
#semi-aerobic
Semi-aerobic
#sequenceAccession
sequenceAccession
#termsOfDistribution
termsofDistribution
#timepoint
timepoint
#tissue
JERM:00207
#tissue
Tissue
#tissue_type
JERM:00180
#tissue_type
Tissue Type
#treatment
JERM:00197
#treatment
Treatment
#turbidostat
a continuous culture device that has feedback between the turbidity of the culture vessel and the dilution rate
#turbidostat
JERM:023
#turbidostat
Turboidostat
#units
units
#version
version
#13C_radiolabelling
JERM:00137
#16S_rRNA
JERM:00215
#2D_gel_electrophoresis
JERM:00115
#2D_gel_electrophoresis
2D Gel Electrophoresis
#2-hybrid_system
Two-hybrid screening (also known as yeast two-hybrid system or Y2H) is a molecular biology technique used to discover protein-protein interactions and protein-DNA interactions by testing for physical interactions
#2-hybrid_system
JERM:00106
#2-hybrid_system
yeast 2 hybrid
#2-hybrid_system
2-hybrid System
#Sex/Gender
JERM:00179
#Sex/Gender
Sex / Gender