Erick Antezana
Shinobu Okamoto
Shuichi Kawashima
Japanese
English
MPO: Microbial Phonotye Ontology
Version 0.5 alpha
An ontology for describing microbial phenotypes
Microbial phenotype
A structured controlled vocabrary for describing microbial phenotypes
Microbial phenotype
Morphology
The form and structure of microbes and their specific structural features
Morphology
Cell shape
Cell shape
Bean
Bean-shaped
Bean
Sphere-shaped (MPO_01016) was merged to this class (MPO_01003) and the label and prefferred label were changed from Coccus to Sphere
Sphere
球菌
Coccoid
Coccus-shaped
Sphere-shaped
Coccus
Sphere
Crescent
Crescent-shaped
Crescent
Curved
Curved-shaped
Curved
Disc
Disc-shaped
Disc
Filament
Filament-shaped
Filament
Flask
Flask-shaped
Flask
Fusiform
Fusiform-shaped
Fusiform
Helical
Helical-shaped
Helical
Open-ring
Open-ring-shaped
Open-ring
Oval
Oval-shaped
Oval
Ovoid
Ovoid-shaped
Ovoid
Pleomorphic
Pleomorphic-shaped
Pleomorphic
桿菌
Rod
Rod-shaped
Bacillus
Rod
Spindle
Spindle
Spiral
Spiral-shaped
Spiral
Spore
Spore-shaped
Spore
Square
Square-shaped
Square
Star
Star-shaped
Star
Vibrio
Vibrio-shaped
Vibrio
Spirochete
Spirochete-shaped
Spirochete
Spirillum
Spirillum
Cell arrangement
Cell arrangement
Single arrangement
Singles
Single
Single arrangement
Pair arrangement
Pair
Pairs
Pair arrangement
Tetrad arrangement
Tetrad
Tetrads
Tetrad arrangement
Chain arrangement
Chains
Chain
Chain arrangement
Filament arrangement
Filament
Filaments
Filament arrangement
Cluster arrangement
Clusters
Cluster
Cluster arrangement
Irregular colony
Irregular colony
V-shaped form arrangement
V-shaped forms
V-shaped form
V-shaped form arrangement
Filamentous arrangement
Filamentous
Filamentous arrangement
Diplococcus arrangement
Diplococcus
Diplococcus arrangement
Diplobacillus arrangement
Diplobacillus
Diplobacillus arrangement
Diplococcus encapsulated arrangement
Diplococcus encapsulated
Diplococcus encapsulated arrangement
Streptococcus arrangement
Streptococcus
Streptococcus arrangement
Streptobacillus arrangement
Streptobacillus {@en]
Streptobacillus arrangement
Sarcina arrangement
Sarcina
Sarcina arrangement
Staphylococcus arrangement
Staphylococcus
Staphylococcus arrangement
Sheathed arrangement
Sheathed
Sheathed arrangement
Motility
Motility
Motile
Motile
Nonmotile
Nonmotile
走性
Taxis
Taxis
動性
Kinesis
Kinesis
走気性
Aerotaxis
Aerotaxis
走圧性
Barotaxis
Barotaxis
走化性
Chemotaxis
Chemotaxis
Energy taxis
Energy taxis
電気走性
Galvanotaxis
Electrotaxis
Galvanotaxis
走磁性
Magnetotaxis
Magnetotaxis
走地性
Gravitaxis
Geotaxis
Gravitaxis
走水質
Hydrotaxis
Hydrotaxis
走光性
Phototaxis
Phototaxis
Scotophobotaxis
Scotophobotaxis
走流性
Rheotaxis
Rheotaxis
Thermotaxis
Thermotaxis
接触走性
Thigmotaxis
Thigmotaxis
Orthokinesis
Orthokinesis
Kinokinesis
Kinokinesis
Chemokinesis
Chemokinesis
Photokinesis
Photokinesis
Gliding motility
Gliding motility
Twitching motility
Twitching motility
Swarming motility
Swarming motility
Swimming motility
Swimming motility
Darting motility
Darting motility
Tumbling motility
Tumbling motility
Sliding motility
Sliding motility
Floating motility
Floating motility
Environmental growth condition
Environmental growth condition
好熱性
Thermophilic
Thermophile
A microbial organism that thrives at relatively high temperatures, between 45 and 122 C (113 and 252 F).
Thermophilic
超好熱性
Hyperthermophilic
Hyperthermophile
A subset of obligate thermophiles for which optimal growth temperatures are above 80C.
Hyperthermophilic
好冷性
Psychrophilic
Psychrophile
Cryophile
Microbial organisms that are capable of growth and reproduction in cold temperatures, ranging from −15 C to +10 C
Psychrophilic
偏性好熱性
Obligate thermophilic
Extreme thermophile
Obligate thermophile
Obligate thermophilic
通性好熱性
Facultative thermophilic
Facultative thermophile
Facultative thermophilic
耐塩性
Classification of growth salinity
Classification of growth salinity
好塩性微生物
Halophile
Halophilic
Halotolerant
耐塩性微生物
Halotolerant
Classification of growth pH
Classification of growth pH
好酸性微生物
Acidophilic
Acidophile
Acidophilic
好アルカリ性微生物
Alkaliphilic
Alkaliphile
Alkalophile
Alkalinophile
Basophile
Alkaliphilic
Neutrophilic
Neutrophile
Neutrophilic
温度許容度
Classification of growth temperature
Temperature tolerance
Classification of growth temperature
Classification of growth pressure
Classification of growth pressure
Peizophilic
好高圧性
Peizophile
Peizophilic
偏性好高圧微生物
Obligate piezophilic
Obligate piezophile
Obligate piezophilic
通性好高圧微生物
Facultative piezophilic
Facultative piezophile
Facultative piezophilic
放射線耐性
Radioresistant
Radioresistant
Psychrotrophic
Psychrotrophic
Psychrotrophile
耐熱性
Thermotolerant
Thermotolerant
耐寒性
Psychrotolerant
Psychrotolerant
中等温度好性
Mesophilic
Mesophile
A mibrobial organism that thrives at moderate temperature, typically between 20 and 45 C (68 and 113 F).
Mesophilic
Alkalitolerant
Alkalitolerant
Euryhaline
広塩性の
Euryhaline
Stenohaline
狭塩性の
Stenohaline
Metabolism related phenotype
Metabolism related phenotype
Oxygen requirement
Oxygen requirement
Aerobe
好気性微生物
Aerobe
Anaerobe
嫌気性微生物
Anaerobe
偏性好気性微生物
Obligate aerobe
Obligate aerobe
通性好気性微生物
Facultative aerobe
Facultative aerobe
偏性嫌気微生物
Obligate anaerobe
Obligate anaerobe
通性嫌気微生物
Facultative anaerobe
Facultative anaerobe
Aerotolerant organism
Aerotolerant organism
Microaerophile
微好気性生物
Microaerophile
Energy source
Energy source
独立栄養
Autotrophic
Autotroph
Autotrophic
従属栄養性
Heterotrophic
Heterotroph
Heterotrophic
Lithotrophic
Lithotroph
Lithotrophic
Methanotrophic
Methanotroph
Methanotrophic
Methylotrophic
Methylotrophic
Oligotrophic
Oligotroph
Oligotrophic
Organotrophic
Organotroph
Organotrophic
ジアゾ栄養生物
Diazotrophic
Diazotroph
Diazotrophic
光栄養
Phototrophic
Phototroph
Phototrophic
Photosynthetic
Photosynthetic microbe
Photosynthetic
Mixotrophic
Mixotroph
Mixotrophic
化学合成生物
Chemotrophic
Chemotroph
Chemotrophic
Microanaerobe
Microanaerobe
Copiotrophic
Copiotroph
Copiotrophic
Photoorganotrophic
Photoorganotroph
Photoorganotrophic
Photolithotrophic
Photolithotroph
Photolithotrophic
光従属栄養
Photoheterotrophic
Photoheterotroph
Photoheterotrophic
光独立栄養
Photoautotrophic
Photoautotroph
Photoautotrophic
Photoorganoheterotrophic
Photoorganoheterotroph
Photoorganoheterotrophic
Photoorganoautotrophic
Photoorganoautotroph
Photoorganoautotrophic
Photolithoheterotrophic
Photolithoheterotroph
Photolithoheterotrophic
Photolithoautotrophic
Photolithoautotroph
Photolithoautotrophic
Chemoorganotrophic
Chemoorganotroph
Chemoorganotrophic
Chemolithotrophic
Chemolithotroph {@en
Chemolithotrophic
Chemoheterotrophic
Chemoheterotroph
Chemoheterotrophic
Chemoautotrophic
Chemoautotroph
Chemoautotrophic
Chemoorganoheterotrophic
Chemoorganoheterotroph
Chemoorganoheterotrophic
Chemoorganoautotrophic
Chemoorganoautotroph
Chemoorganoautotrophic
Chemolithoheterotrophic
Chemolithoheterotroph
Chemolithoheterotrophic
Chemolithoautotrophic
Chemolithoautotroph
Chemolithoautotrophic
Lithoautotrophic
Lithoautotroph
Lithoautotrophic
Lithoheterotrophic
Lithoheterotroph
Lithoheterotrophic
Carboxydotrophic
Carboxydotroph
Any organism that can tolerate a high concentration of carbon monoxide
Carboxydotrophic
栄養要求株
Auxotrophic
Auxotrophic
Capnophilic
Capnophile
Capnophilic
Fermentation
Fermentation
Alcohol fermentation
Alcohol fermentation
Acetate fermentation
Acetate fermentation
Lactate fermentation
Lactate fermentation
Aceton-butanol fermentation
Aceton-butanol fermentation
Phagotrophic
摂食栄養
Phagotrophic
Assimilation
Assimilation
Catabolism
Dissimilatory process
Catabolism
Nitrogen fixation
Nitrogen fixation
Biosynthesis
Biosynthesis
Lipid
Lipid
Quinone
Quinone
Benzoquinone
Benzoquinone
Naphthoquinone
Naphthoquinone
MK-4
Menaquinone-4
MK-4
MK-5
Menaquinone-5
MK-5
MK-6
Menaquinone-6
MK-6
MK-7
Menaquinone-7
MK-7
MK-8
Menaquinone-8
MK-8
MK-9
Menaquinone-9
MK-9
MK-10
Menaquinone-10
MK-10
MK-11
Menaquinone-11
MK-11
MK-12
Menaquinone-12
MK-12
MK-13
Menaquinone-13
MK-13
MK-14
Menaquinone-14
MK-14
MK-n
Menaquinone-n
MK-n
MK
Menaquinone
MK
DMK
Demethylmenaquinone
DMK
DMK-5
Demethylmenaquinone-5
DMK-5
DMK-6
Demethylmenaquinone-6
DMK-6
DMK-7
Demethylmenaquinone-7
DMK-7
DMK-8
Demethylmenaquinone-8
DMK-8
MTK
Methionaquinone-7
MTK
MTK-7
Methionaquinone-7
MTK-7
Q-3
Ubiquinone-3
Q-3
Q-4
Ubiquinone-4
Q-4
Q-5
Ubiquinone-5
Q-5
Q-6
Ubiquinone-6
Q-6
Q-7
Ubiquinone-7
Q-7
Q-8
Ubiquinone-8
Q-8
Q-9
Ubiquinone-9
Q-9
Q-10
Ubiquinone-10
Q-10
Q-11
Ubiquinone-11
Q-11
Q-12
Ubiquinone-12
Q-12
Q-13
Ubiquinone-13
Q-13
Q-14
Ubiquinone-14
Q-14
Q
Ubiquinone
Q
MQ
MQ
MQ-8
18-methylene-ubiquinone-8
MQ-8
MDMQ
MDMQ
MDMQ-6
11-methylene-18-dimethyl-ubiquinone-6
MDMQ-6
TPQ
Thermoplasma quinone
TPQ
TPQ-6
Thermoplasma quinone-6
TPQ-6
TPQ-7
Thermoplasma quinone-7
TPQ-7
MK-5(H2)
Menaquinone-5(H2)
MK-5(H2)
MK-6(H2)
Menaquinone-6(H2)
MK-6(H2)
MK-8(H2)
Menaquinone-8(H2)
MK-8(H2)
MK-8(H4)
Menaquinone-8(H4)
MK-8(H4)
MK-9(H0)
Menaquinone-9(H0)
MK-9(H0)
MK-9(H2)
Menaquinone-9(H2)
MK-9(H2)
MK-9(H4)
Menaquinone-9(H4)
MK-9(H4)
MK-9(H6)
Menaquinone-9(H6)
MK-9(H6)
MK-9(H8)
Menaquinone-9(H8)
MK-9(H8)
MK-10(H4)
Menaquinone-10(H4)
MK-10(H4)
MK-10(H6)
Menaquinone-10(H6)
MK-10(H6)
MK-10(H8)
Menaquinone-10(H8)
MK-10(H8)
MK-11(H6)
Menaquinone-11(H6)
MK-11(H6)
MTK-7(H2)
Methionaquinone-7(H2)
MTK-7(H2)
MTK-7(H4)
Methionaquinone-7(H4)
MTK-7(H4)
TMK
TMK
TMK-6
TMK-6
RQ
RQ
RQ-8
Rhodoquinone-8
RQ-8
RQ-10
Rhodoquinone-10
RQ-10
MK-10(H2)
Menaquinone-10(H2)
MK-10(H2)
MK-10(H0)
Menaquinone-10(H0)
MK-10(H0)
MK-11(H4)
Menaquinone-11(H4)
MK-11(H4)
MK-11(H2)
Menaquinone-11(H2)
MK-11(H2)
MK-4(H6)
Menaquinone-4(H6)
MK-4(H6)
MK-4(H8)
MK-4(H8)
MK-5(H8)
Menaquinone-5(H8)
MK-5(H8)
MK-5(H10)
Menaquinone-5(H10)
MK-5(H10)
MK-6(H4)
Menaquinone-6(H4)
MK-6(H4)
MK-6(H8)
Menaquinone-6(H8)
MK-6(H8)
MK-6(H10)
Menaquinone-6(H10)
MK-6(H10)
MK-7(H0)
Menaquinone-7(H0)
MK-7(H0)
MK-7(H2)
Menaquinone-7(H2)
MK-7(H2)
MK-7(H4)
Menaquinone-7(H4)
MK-7(H4)
MK-7(H14)
Menaquinone-7(H14)
MK-7(H14)
MK-8(H6)
Menaquinone-8(H6)
MK-8(H6)
MK-9(H10)
MK-9(H10)
MMK
Methylmenaquinone
MMK
MMK-5
Methylmenaquinone-5
MMK-5
MMK-6
Methylmenaquinone-6
MMK-6
MMK-7
Methylmenaquinone-7
MMK-7
MMK-8
Methylmenaquinone-8
MMK-8
MMK-5(H10)
Methylmenaquinone-5(H10)
MMK-5(H10)
MMK-6(H12)
Methylmenaquinone-6(H12)
MMK-6(H12)
MTK-6
Methylmenaquinone-6
MTK-6
Q-10(H2)
Ubiquinone-10(H2)
Q-10(H2)
Q-10(H4)
Ubiquinone-10(H4)
Q-10(H4)
SQ
Smaragdiquinone
SQ
SQA-8
Smaragdiquinone A-8
SQA-8
SQB-8
Smaragdiquinone B-8
SQB-8
Development
Development
Resting spore forming
休眠胞子形成
Akinete forming
アキネート形成
Resting spore forming
Hetelocyst forming
Hetelocyst forming
Serotype
Serotype
Staining
Cell staining
細胞染色
Staining
Gram stain
グラム染色
Gram stain
Gram positive
グラム陽性
Gram positive
グラム陰性
Gram negative
Gram negative
Gram variable
Gram variable
Ziehl–Neelsen stain
抗酸染色
acid-fast stain
Ziehl–Neelsen stain
Cell accumulation
Cell accumulation
Algae bloom
水の華
Algae bloom
Red tide
赤潮
Red tide
Cyanobacterial water bloom
アオコ
Cyanobacterial water bloom
Way of life
Way of life
Planktonic
Planktonic
Benthic
Benthic
Epilithic
Lithophyte
Epilithic
Aerial
Aerial
show phenotypes
show phenotypes
show cell shape
show cell shape
oxygen requirement
oxygen requirement
temperature range
temperature range
growth pH
growth pH
optimal growth pH
optimal growth pH
minimum growth pH
minimum growth pH
maximum growth pH
maximum growth pH
growth temperature
growth temperature
optimal growth temperature
optimal growth temperature
minimal growth temperature
minimal growth temperature
maximal growth temperature
maximal growth temperature
pH preference
pH preference
show motility
show motility
salinity preference
salinity preference
primary nutritional groups
primary nutritional groups
show cell arrangement
show cell arrangement
produce quinones
produce quinones
produce antibiotics
produce antibiotics
Sexual reproduction
Sexual reproduction
Heterothallic
自家不和合性
Heterothallic
Homothallic
自家和合性
Homothallic
Isogamy
Isogamy
Anisogamy
Heterogamy
Anisogamy
Dioecious
Dioecious
Monoecious
Monoecious