252
18
0
http://purl.obolibrary.org/obo/OBI_0000454
extracellular electrophysiology recording
'extracellular electrophysiology recording' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'ion channel activity'))
'extracellular electrophysiology recording' SubClassOf 'achieves_planned_objective' some 'assay objective'
'extracellular electrophysiology recording' SubClassOf 'has_specified_output' some ('is about' some 'ion channel activity')
'extracellular electrophysiology recording' SubClassOf 'has_specified_output' some 'mass measurement datum'
http://purl.obolibrary.org/obo/OBI_0000470
mass spectrometry assay
'mass spectrometry assay' EquivalentTo 'assay' and (('realizes' some
('function' and ('inheres in' some 'mass spectrometer'))) and ('has_specified_input' some 'mass spectrometer'))
'mass spectrometry assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'mass spectrometer'))) and ('has_specified_input' some 'mass spectrometer')
http://purl.obolibrary.org/obo/OBI_0001740
quenching assay measuring the off rate [koff] of a B cell epitope:antibody complex
'quenching assay measuring the off rate [koff] of a B cell epitope:antibody complex' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001742
quenching assay measuring the on rate [kon] of a B cell epitope:antibody complex
'quenching assay measuring the on rate [kon] of a B cell epitope:antibody complex' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0000418
measuring glucose concentration in blood serum
'measuring glucose concentration in blood serum' SubClassOf 'realizes' some
('evaluant role' and ('role of' some 'blood serum specimen'))
'measuring glucose concentration in blood serum' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'glucose'))
'measuring glucose concentration in blood serum' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'blood serum specimen'))) and ('has_specified_input' some
('blood serum specimen' and ('has role' some 'evaluant role')))
'measuring glucose concentration in blood serum' SubClassOf ('realizes' some
('analyte role' and ('inheres in' some 'glucose'))) and ('has_specified_input' some 'glucose')
http://purl.obolibrary.org/obo/OBI_0000424
transcription profiling assay
'transcription profiling assay' SubClassOf 'has_specified_input' some
('specimen' and ('has part' some 'ribonucleic acid'))
'transcription profiling assay' SubClassOf 'analyte assay'
'transcription profiling assay' EquivalentTo 'assay' and ('achieves_planned_objective' some 'transcription profiling identification objective')
'transcription profiling assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'ribonucleic acid'))
'transcription profiling assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'gene expression'))
'transcription profiling assay' EquivalentTo 'assay' and (('realizes' some
('evaluant role' and ('role of' some 'RNA extract'))) and ('has_specified_input' some
('RNA extract' and ('has role' some 'evaluant role')))) and (('realizes' some
('analyte role' and ('inheres in' some 'ribonucleic acid'))) and ('has_specified_input' some 'ribonucleic acid')) and ('has_specified_input' some
('specimen' and ('has part' some 'ribonucleic acid'))) and ('has_specified_output' some 'measurement datum') and ('has_specified_output' some ('is about' some 'gene expression')) and ('achieves_planned_objective' some 'transcription profiling identification objective')
'transcription profiling assay' SubClassOf 'assay'
http://purl.obolibrary.org/obo/OBI_0000435
genotyping assay
'genotyping assay' EquivalentTo 'has_specified_output' some 'genotype information'
'genotyping assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'deoxyribonucleic acid'))
'genotyping assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'DNA extract'))) and ('has_specified_input' some
('DNA extract' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0000433
DNA sequence feature detection
'DNA sequence feature detection' SubClassOf 'has_specified_input' some 'deoxyribonucleic acid'
'DNA sequence feature detection' SubClassOf 'achieves_planned_objective' some 'assay objective'
'DNA sequence feature detection' SubClassOf 'has_specified_output' some 'measurement datum'
'DNA sequence feature detection' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'DNA extract'))) and ('has_specified_input' some
('DNA extract' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0000438
DNA sequence variation detection
'DNA sequence variation detection' SubClassOf 'has_specified_input' some 'deoxyribonucleic acid'
'DNA sequence variation detection' SubClassOf 'achieves_planned_objective' some 'assay objective'
'DNA sequence variation detection' SubClassOf 'has_specified_input' some 'DNA extract'
http://purl.obolibrary.org/obo/OBI_0000447
intra cellular electrophysiology recording
'intra cellular electrophysiology recording' SubClassOf 'achieves_planned_objective' some 'assay objective'
'intra cellular electrophysiology recording' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'ion channel activity'))
'intra cellular electrophysiology recording' SubClassOf 'has_specified_output' some ('is about' some 'ion channel activity')
'intra cellular electrophysiology recording' SubClassOf 'has_specified_output' some 'mass measurement datum'
http://purl.obolibrary.org/obo/OBI_0000445
mass measurement assay
'mass measurement assay' SubClassOf 'realizes' some
('evaluant role' and ('role of' some 'material entity'))
'mass measurement assay' SubClassOf 'has_specified_input' some
('material entity' and ('has role' some 'evaluant role'))
'mass measurement assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'mass measurement assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'material entity'))) and ('has_specified_input' some
('material entity' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0000443
analyte assay
'analyte assay' EquivalentTo 'achieves_planned_objective' some 'analyte measurement objective'
'analyte assay' SubClassOf 'realizes' some 'analyte role'
'analyte assay' SubClassOf 'achieves_planned_objective' some 'analyte measurement objective'
http://purl.obolibrary.org/obo/OBI_0001848
chromatin interaction analysis by paired-end tag sequencing
'chromatin interaction analysis by paired-end tag sequencing' SubClassOf 'achieves_planned_objective' some 'analyte measurement objective'
'chromatin interaction analysis by paired-end tag sequencing' SubClassOf 'has part' some 'paired-end library preparation'
'chromatin interaction analysis by paired-end tag sequencing' SubClassOf 'has part' some 'DNA sequencing'
'chromatin interaction analysis by paired-end tag sequencing' SubClassOf 'has part' some 'cross linking'
'chromatin interaction analysis by paired-end tag sequencing' SubClassOf 'has part' some 'immunoprecipitation'
'chromatin interaction analysis by paired-end tag sequencing' SubClassOf 'has_specified_input' some
('protein complex' and ('has role' some 'evaluant role'))
'chromatin interaction analysis by paired-end tag sequencing' SubClassOf 'achieves_planned_objective' some 'protein and DNA interaction identification objective'
'chromatin interaction analysis by paired-end tag sequencing' SubClassOf 'assay using chromatin immunoprecipitation'
'chromatin interaction analysis by paired-end tag sequencing' SubClassOf 'has participant' some 'DNA sequencer'
'chromatin interaction analysis by paired-end tag sequencing' SubClassOf 'has part' some 'chromatin immunoprecipitation'
'chromatin interaction analysis by paired-end tag sequencing' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
'chromatin interaction analysis by paired-end tag sequencing' SubClassOf 'has part' some 'sequencing assay'
'chromatin interaction analysis by paired-end tag sequencing' SubClassOf 'has part' some 'chromosome conformation capture assay'
'chromatin interaction analysis by paired-end tag sequencing' SubClassOf 'nuclear ligation assay'
'chromatin interaction analysis by paired-end tag sequencing' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'protein complex'))) and ('has_specified_input' some
('protein complex' and ('has role' some 'evaluant role')))
'chromatin interaction analysis by paired-end tag sequencing' SubClassOf 'achieves_planned_objective' some 'chromosome conformation identification objective'
http://purl.obolibrary.org/obo/OBI_0001849
structural analysis by paired-end tag sequencing
'structural analysis by paired-end tag sequencing' SubClassOf 'has part' some 'DNA sequencing'
'structural analysis by paired-end tag sequencing' SubClassOf 'has_specified_input' some
('deoxyribonucleic acid' and ('has role' some 'evaluant role'))
'structural analysis by paired-end tag sequencing' SubClassOf 'has part' some 'paired-end library preparation'
'structural analysis by paired-end tag sequencing' SubClassOf 'achieves_planned_objective' some 'sequence feature identification objective'
'structural analysis by paired-end tag sequencing' SubClassOf 'has participant' some 'DNA sequencer'
'structural analysis by paired-end tag sequencing' SubClassOf 'has_specified_output' some 'DNA sequence data'
http://purl.obolibrary.org/obo/OBI_0001850
transcript analysis by paired-end tag sequencing
'transcript analysis by paired-end tag sequencing' SubClassOf 'has participant' some 'DNA sequencer'
'transcript analysis by paired-end tag sequencing' SubClassOf 'has_specified_input' some
('ribonucleic acid' and ('has role' some 'evaluant role'))
'transcript analysis by paired-end tag sequencing' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
'transcript analysis by paired-end tag sequencing' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'RNA extract'))) and ('has_specified_input' some
('RNA extract' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0001853
DNase I hypersensitive sites sequencing assay
'DNase I hypersensitive sites sequencing assay' SubClassOf 'has participant' some 'DNA sequencer'
'DNase I hypersensitive sites sequencing assay' SubClassOf 'has_specified_input' some
('deoxyribonucleic acid' and ('has role' some 'evaluant role'))
'DNase I hypersensitive sites sequencing assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'DNA extract'))) and ('has_specified_input' some
('DNA extract' and ('has role' some 'evaluant role')))
'DNase I hypersensitive sites sequencing assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
http://purl.obolibrary.org/obo/OBI_0000520
clinical chemistry assay
'clinical chemistry assay' SubClassOf 'realizes' some
('evaluant role' and ('role of' some 'material entity'))
'clinical chemistry assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'scattered molecular aggregate'))
'clinical chemistry assay' SubClassOf 'achieves_planned_objective' some 'analyte measurement objective'
'clinical chemistry assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'blood specimen'))) and ('has_specified_input' some
('blood specimen' and ('has role' some 'evaluant role')))
'clinical chemistry assay' SubClassOf ('realizes' some
('analyte role' and ('inheres in' some 'scattered molecular aggregate'))) and ('has_specified_input' some 'scattered molecular aggregate')
http://purl.obolibrary.org/obo/OBI_0001857
RNP (ribonuclear particle) immunoprecipitation high- throughput sequencing assay
'RNP (ribonuclear particle) immunoprecipitation high- throughput sequencing assay' SubClassOf 'has participant' some 'DNA sequencer'
'RNP (ribonuclear particle) immunoprecipitation high- throughput sequencing assay' SubClassOf 'achieves_planned_objective' some 'analyte measurement objective'
'RNP (ribonuclear particle) immunoprecipitation high- throughput sequencing assay' SubClassOf 'has_specified_input' some
('protein complex' and ('has role' some 'evaluant role'))
'RNP (ribonuclear particle) immunoprecipitation high- throughput sequencing assay' SubClassOf 'has participant' some 'sonicator'
'RNP (ribonuclear particle) immunoprecipitation high- throughput sequencing assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'protein complex'))) and ('has_specified_input' some
('protein complex' and ('has role' some 'evaluant role')))
'RNP (ribonuclear particle) immunoprecipitation high- throughput sequencing assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
'RNP (ribonuclear particle) immunoprecipitation high- throughput sequencing assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'sonicator'))) and ('has_specified_input' some 'sonicator')
http://purl.obolibrary.org/obo/OBI_0001858
cross-linking immunoprecipitation high-throughput sequencing assay
'cross-linking immunoprecipitation high-throughput sequencing assay' SubClassOf 'achieves_planned_objective' some 'analyte measurement objective'
'cross-linking immunoprecipitation high-throughput sequencing assay' SubClassOf 'has participant' some 'sonicator'
'cross-linking immunoprecipitation high-throughput sequencing assay' SubClassOf 'has participant' some 'DNA sequencer'
'cross-linking immunoprecipitation high-throughput sequencing assay' SubClassOf 'has_specified_input' some
('protein complex' and ('has role' some 'evaluant role'))
'cross-linking immunoprecipitation high-throughput sequencing assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'protein complex'))) and ('has_specified_input' some
('protein complex' and ('has role' some 'evaluant role')))
'cross-linking immunoprecipitation high-throughput sequencing assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
http://purl.obolibrary.org/obo/OBI_0001859
formaldehyde-assisted isolation of regulatory elements assay
'formaldehyde-assisted isolation of regulatory elements assay' SubClassOf 'has participant' some 'DNA sequencer'
'formaldehyde-assisted isolation of regulatory elements assay' SubClassOf 'has participant' some 'sonicator'
'formaldehyde-assisted isolation of regulatory elements assay' SubClassOf 'has_specified_input' some
('deoxyribonucleic acid' and ('has role' some 'evaluant role'))
'formaldehyde-assisted isolation of regulatory elements assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'DNA extract'))) and ('has_specified_input' some
('DNA extract' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0001023
Fe-BABE RNA structure mapping assay
'Fe-BABE RNA structure mapping assay' SubClassOf 'has_specified_input' some 'ribonucleic acid'
'Fe-BABE RNA structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of RNA molecule'))
'Fe-BABE RNA structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'Fe-BABE RNA structure mapping assay' SubClassOf 'realizes' some
('reagent role' and ('inheres in' some '(S)-1-(4-bromoacetamidobenzyl)EDTA'))
'Fe-BABE RNA structure mapping assay' SubClassOf 'has_specified_input' some 'RNA extract'
'Fe-BABE RNA structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of RNA molecule')
'Fe-BABE RNA structure mapping assay' SubClassOf 'has_specified_output' some 'measurement datum'
http://purl.obolibrary.org/obo/OBI_0001024
RNASE U2 structure mapping assay
'RNASE U2 structure mapping assay' SubClassOf 'has_specified_input' some 'ribonucleic acid'
'RNASE U2 structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of RNA molecule'))
'RNASE U2 structure mapping assay' SubClassOf 'has_specified_input' some
('ribonuclease U2' and ('participates in' some 'catalytic activity'))
'RNASE U2 structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'RNASE U2 structure mapping assay' SubClassOf ('realizes' some
('reagent role' and ('inheres in' some 'ribonuclease U2'))) and ('has_specified_input' some 'ribonuclease U2')
'RNASE U2 structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of RNA molecule')
'RNASE U2 structure mapping assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'RNA extract'))) and ('has_specified_input' some
('RNA extract' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0001025
binding constant determination assay
'binding constant determination assay' EquivalentTo 'binding assay' and ('has_specified_output' some 'binding constant')
'binding constant determination assay' SubClassOf 'has_specified_output' some 'binding constant'
http://purl.obolibrary.org/obo/OBI_0001026
NMIA RNA structure mapping assay
'NMIA RNA structure mapping assay' SubClassOf 'realizes' some
('reagent role' and ('inheres in' some 'N-methylisatoic anhydride'))
'NMIA RNA structure mapping assay' SubClassOf 'has_specified_input' some 'ribonucleic acid'
'NMIA RNA structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of RNA molecule'))
'NMIA RNA structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'NMIA RNA structure mapping assay' SubClassOf 'has_specified_output' some 'measurement datum'
'NMIA RNA structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of RNA molecule')
'NMIA RNA structure mapping assay' SubClassOf 'has_specified_input' some 'RNA extract'
http://purl.obolibrary.org/obo/OBI_0001027
Terbium RNA structure mapping assay
'Terbium RNA structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'Terbium RNA structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of RNA molecule'))
'Terbium RNA structure mapping assay' SubClassOf 'realizes' some
('reagent role' and ('inheres in' some 'terbium atom'))
'Terbium RNA structure mapping assay' SubClassOf 'has_specified_input' some 'ribonucleic acid'
'Terbium RNA structure mapping assay' SubClassOf 'has_specified_output' some 'measurement datum'
'Terbium RNA structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of RNA molecule')
'Terbium RNA structure mapping assay' SubClassOf 'has_specified_input' some 'RNA extract'
http://purl.obolibrary.org/obo/OBI_0001029
OH-radical structure mapping assay
'OH-radical structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'OH-radical structure mapping assay' SubClassOf 'realizes' some
('reagent role' and ('inheres in' some 'hydroxyl'))
'OH-radical structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of sequence macromolecule'))
'OH-radical structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of sequence macromolecule')
'OH-radical structure mapping assay' SubClassOf 'has_specified_output' some 'measurement datum'
http://purl.obolibrary.org/obo/OBI_0001020
Lead structure mapping assay
'Lead structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of sequence macromolecule'))
'Lead structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'Lead structure mapping assay' SubClassOf 'realizes' some
('reagent role' and ('inheres in' some 'lead(0)'))
'Lead structure mapping assay' SubClassOf 'has_specified_output' some 'measurement datum'
'Lead structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of sequence macromolecule')
http://purl.obolibrary.org/obo/OBI_0001021
RNASE T2 structure mapping assay
'RNASE T2 structure mapping assay' SubClassOf 'has_specified_input' some
('ribonuclease T2' and ('participates in' some 'catalytic activity'))
'RNASE T2 structure mapping assay' SubClassOf 'has_specified_input' some 'ribonucleic acid'
'RNASE T2 structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of RNA molecule'))
'RNASE T2 structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'RNASE T2 structure mapping assay' SubClassOf ('realizes' some
('reagent role' and ('inheres in' some 'ribonuclease T2'))) and ('has_specified_input' some 'ribonuclease T2')
'RNASE T2 structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of RNA molecule')
'RNASE T2 structure mapping assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'RNA extract'))) and ('has_specified_input' some
('RNA extract' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0001035
Nuclease S1 structure mapping assay
'Nuclease S1 structure mapping assay' SubClassOf 'has_specified_input' some
('nuclease S1' and ('participates in' some 'catalytic activity'))
'Nuclease S1 structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of sequence macromolecule'))
'Nuclease S1 structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'Nuclease S1 structure mapping assay' SubClassOf 'has_specified_input' some 'ribonucleic acid'
'Nuclease S1 structure mapping assay' SubClassOf ('realizes' some
('reagent role' and ('inheres in' some 'nuclease S1'))) and ('has_specified_input' some 'nuclease S1')
'Nuclease S1 structure mapping assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'RNA extract'))) and ('has_specified_input' some
('RNA extract' and ('has role' some 'evaluant role')))
'Nuclease S1 structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of sequence macromolecule')
http://purl.obolibrary.org/obo/OBI_0001038
Ruthenium structure mapping assay
'Ruthenium structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'Ruthenium structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of RNA molecule'))
'Ruthenium structure mapping assay' SubClassOf 'realizes' some
('reagent role' and ('inheres in' some 'ruthenium atom'))
'Ruthenium structure mapping assay' SubClassOf 'has_specified_output' some 'measurement datum'
'Ruthenium structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of RNA molecule')
http://purl.obolibrary.org/obo/OBI_0001039
inline probing RNA structure mapping
'inline probing RNA structure mapping' SubClassOf 'realizes' some
('reagent role' and ('inheres in' some 'ribonucleic acid'))
'inline probing RNA structure mapping' SubClassOf 'has_specified_input' some 'ribonucleic acid'
'inline probing RNA structure mapping' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of RNA molecule'))
'inline probing RNA structure mapping' SubClassOf 'achieves_planned_objective' some 'assay objective'
'inline probing RNA structure mapping' SubClassOf 'has_specified_input' some 'RNA extract'
'inline probing RNA structure mapping' SubClassOf 'has_specified_output' some 'measurement datum'
'inline probing RNA structure mapping' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of RNA molecule')
http://purl.obolibrary.org/obo/OBI_0001030
RNASE T1 structure mapping assay
'RNASE T1 structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'RNASE T1 structure mapping assay' SubClassOf 'has_specified_input' some 'ribonucleic acid'
'RNASE T1 structure mapping assay' SubClassOf 'has_specified_input' some
('guanyl-specific ribonuclease T1' and ('participates in' some 'catalytic activity'))
'RNASE T1 structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of RNA molecule'))
'RNASE T1 structure mapping assay' SubClassOf ('realizes' some
('reagent role' and ('inheres in' some 'guanyl-specific ribonuclease T1'))) and ('has_specified_input' some 'guanyl-specific ribonuclease T1')
'RNASE T1 structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of RNA molecule')
'RNASE T1 structure mapping assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'RNA extract'))) and ('has_specified_input' some
('RNA extract' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0001001
Edinburgh handedness assay
'Edinburgh handedness assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'Homo sapiens'))) and ('has_specified_input' some
('Homo sapiens' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0001005
RNASE CL3 structure mapping assay
'RNASE CL3 structure mapping assay' SubClassOf 'has_specified_input' some 'ribonucleic acid'
'RNASE CL3 structure mapping assay' SubClassOf 'has_specified_input' some
('ribonuclease CL3' and ('participates in' some 'catalytic activity'))
'RNASE CL3 structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of RNA molecule'))
'RNASE CL3 structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'RNASE CL3 structure mapping assay' SubClassOf ('realizes' some
('reagent role' and ('inheres in' some 'ribonuclease CL3'))) and ('has_specified_input' some 'ribonuclease CL3')
'RNASE CL3 structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of RNA molecule')
'RNASE CL3 structure mapping assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'RNA extract'))) and ('has_specified_input' some
('RNA extract' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0001006
CMCT structure mapping assay
'CMCT structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of sequence macromolecule'))
'CMCT structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'CMCT structure mapping assay' SubClassOf 'realizes' some
('reagent role' and ('inheres in' some 'diethyl pyrocarbonate'))
'CMCT structure mapping assay' SubClassOf 'has_specified_output' some 'measurement datum'
'CMCT structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of sequence macromolecule')
http://purl.obolibrary.org/obo/OBI_0001008
MPE-Fe(II) structure mapping assay
'MPE-Fe(II) structure mapping assay' SubClassOf 'has_specified_input' some 'ribonucleic acid'
'MPE-Fe(II) structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'MPE-Fe(II) structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of RNA molecule'))
'MPE-Fe(II) structure mapping assay' SubClassOf 'realizes' some
('reagent role' and ('inheres in' some 'EDTA methidiumpropylamide'))
'MPE-Fe(II) structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of RNA molecule')
'MPE-Fe(II) structure mapping assay' SubClassOf 'has_specified_input' some 'RNA extract'
'MPE-Fe(II) structure mapping assay' SubClassOf 'has_specified_output' some 'measurement datum'
http://purl.obolibrary.org/obo/OBI_0001012
RNASE V1 structure mapping assay
'RNASE V1 structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'RNASE V1 structure mapping assay' SubClassOf 'has_specified_input' some
('ribonuclease V1' and ('participates in' some 'catalytic activity'))
'RNASE V1 structure mapping assay' SubClassOf 'has_specified_input' some 'ribonucleic acid'
'RNASE V1 structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of RNA molecule'))
'RNASE V1 structure mapping assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'RNA extract'))) and ('has_specified_input' some
('RNA extract' and ('has role' some 'evaluant role')))
'RNASE V1 structure mapping assay' SubClassOf ('realizes' some
('reagent role' and ('inheres in' some 'ribonuclease V1'))) and ('has_specified_input' some 'ribonuclease V1')
'RNASE V1 structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of RNA molecule')
http://purl.obolibrary.org/obo/OBI_0001013
kethoxal structure mapping assay
'kethoxal structure mapping assay' SubClassOf 'realizes' some
('reagent role' and ('inheres in' some '1,1-dihydroxy-3-ethoxy-2-butanone'))
'kethoxal structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of sequence macromolecule'))
'kethoxal structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'kethoxal structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of sequence macromolecule')
'kethoxal structure mapping assay' SubClassOf 'has_specified_output' some 'measurement datum'
http://purl.obolibrary.org/obo/OBI_0001014
single-nucleotide-resolution nucleic acid structure mapping assay using enzymatic probing
'single-nucleotide-resolution nucleic acid structure mapping assay using enzymatic probing' EquivalentTo 'has_specified_input' some
('protein' and ('participates in' some 'catalytic activity'))
'single-nucleotide-resolution nucleic acid structure mapping assay using enzymatic probing' EquivalentTo 'single-nucleotide-resolution nucleic acid structure mapping assay' and (('realizes' some
('reagent role' and ('inheres in' some 'enzyme'))) and ('has_specified_input' some 'enzyme')) and ('has_specified_output' some ('is about' some 'secondary structure of sequence macromolecule'))
http://purl.obolibrary.org/obo/OBI_0001015
DMS structure mapping assay
'DMS structure mapping assay' SubClassOf 'realizes' some
('reagent role' and ('inheres in' some 'dimethyl sulfate'))
'DMS structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'DMS structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of sequence macromolecule'))
'DMS structure mapping assay' SubClassOf 'has_specified_output' some 'measurement datum'
'DMS structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of sequence macromolecule')
http://purl.obolibrary.org/obo/OBI_0001016
DNASE 1 structure mapping assay
'DNASE 1 structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'DNASE 1 structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of sequence macromolecule'))
'DNASE 1 structure mapping assay' SubClassOf 'has_specified_input' some
('deoxyribonuclease-1' and ('participates in' some 'catalytic activity'))
'DNASE 1 structure mapping assay' SubClassOf 'has_specified_input' some 'deoxyribonucleic acid'
'DNASE 1 structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of sequence macromolecule')
'DNASE 1 structure mapping assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'RNA extract'))) and ('has_specified_input' some
('RNA extract' and ('has role' some 'evaluant role')))
'DNASE 1 structure mapping assay' SubClassOf ('realizes' some
('reagent role' and ('inheres in' some 'deoxyribonuclease-1'))) and ('has_specified_input' some 'deoxyribonuclease-1')
http://purl.obolibrary.org/obo/OBI_0001017
single-nucleotide-resolution nucleic acid structure mapping assay using chemical probing
'single-nucleotide-resolution nucleic acid structure mapping assay using chemical probing' EquivalentTo ('realizes' some
('reagent role' and ('inheres in' some
('molecular entity' or 'nucleic acid')))) and ('has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of sequence macromolecule')))
'single-nucleotide-resolution nucleic acid structure mapping assay using chemical probing' EquivalentTo 'single-nucleotide-resolution nucleic acid structure mapping assay' and (('realizes' some
('reagent role' and ('inheres in' some
('molecular entity' and (not ('enzyme')))))) and ('has_specified_input' some
('molecular entity' and (not ('enzyme'))))) and ('has_specified_output' some ('is about' some 'secondary structure of sequence macromolecule'))
http://purl.obolibrary.org/obo/OBI_0001018
Rhodium DNA structure mapping assay
'Rhodium DNA structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of sequence macromolecule'))
'Rhodium DNA structure mapping assay' SubClassOf 'realizes' some
('reagent role' and ('inheres in' some 'rhodium atom'))
'Rhodium DNA structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'Rhodium DNA structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of sequence macromolecule')
'Rhodium DNA structure mapping assay' SubClassOf 'has_specified_output' some 'measurement datum'
http://purl.obolibrary.org/obo/OBI_0001019
RNA ADA I RNA structure mapping assay
'RNA ADA I RNA structure mapping assay' SubClassOf 'has_specified_input' some 'ribonucleic acid'
'RNA ADA I RNA structure mapping assay' SubClassOf 'has_specified_input' some
('double-stranded RNA-specific adenosine deaminase' and ('participates in' some 'catalytic activity'))
'RNA ADA I RNA structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'RNA ADA I RNA structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of RNA molecule'))
'RNA ADA I RNA structure mapping assay' SubClassOf ('realizes' some
('reagent role' and ('inheres in' some 'double-stranded RNA-specific adenosine deaminase'))) and ('has_specified_input' some 'double-stranded RNA-specific adenosine deaminase')
'RNA ADA I RNA structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of RNA molecule')
'RNA ADA I RNA structure mapping assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'RNA extract'))) and ('has_specified_input' some
('RNA extract' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0001011
ENU structure mapping assay
'ENU structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'ENU structure mapping assay' SubClassOf 'realizes' some
('reagent role' and ('inheres in' some 'N-ethyl-N-nitrosourea'))
'ENU structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of sequence macromolecule'))
'ENU structure mapping assay' SubClassOf 'has_specified_output' some 'measurement datum'
'ENU structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of RNA molecule')
http://purl.obolibrary.org/obo/OBI_0001861
methylation-sensitive restriction enzyme sequencing assay
'methylation-sensitive restriction enzyme sequencing assay' SubClassOf 'has_specified_output' some
('DNA sequence data' and ('is about' some 'regulation of DNA methylation'))
'methylation-sensitive restriction enzyme sequencing assay' SubClassOf 'has_specified_input' some
('deoxyribonucleic acid' and ('has role' some 'evaluant role'))
'methylation-sensitive restriction enzyme sequencing assay' SubClassOf 'has participant' some 'DNA sequencer'
'methylation-sensitive restriction enzyme sequencing assay' SubClassOf 'has_specified_output' some ('is about' some 'regulation of DNA methylation')
'methylation-sensitive restriction enzyme sequencing assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
'methylation-sensitive restriction enzyme sequencing assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'DNA extract'))) and ('has_specified_input' some
('DNA extract' and ('has role' some 'evaluant role')))
'methylation-sensitive restriction enzyme sequencing assay' SubClassOf 'has_specified_output' some 'DNA sequence data'
http://purl.obolibrary.org/obo/OBI_0001863
shotgun bisulfite-seq assay
'shotgun bisulfite-seq assay' SubClassOf 'has participant' some 'sonicator'
'shotgun bisulfite-seq assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'sonicator'))) and ('has_specified_input' some 'sonicator')
http://purl.obolibrary.org/obo/OBI_0001864
RNA Annotation and Mapping of Promoters for the Analysis of Gene Expression assay
'RNA Annotation and Mapping of Promoters for the Analysis of Gene Expression assay' SubClassOf 'has_specified_input' some
('ribonucleic acid' and ('has role' some 'evaluant role'))
'RNA Annotation and Mapping of Promoters for the Analysis of Gene Expression assay' SubClassOf 'has participant' some 'DNA sequencer'
'RNA Annotation and Mapping of Promoters for the Analysis of Gene Expression assay' SubClassOf 'has part' some 'RNA sequencing'
'RNA Annotation and Mapping of Promoters for the Analysis of Gene Expression assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
'RNA Annotation and Mapping of Promoters for the Analysis of Gene Expression assay' SubClassOf 'has part' some 'sequencing assay'
'RNA Annotation and Mapping of Promoters for the Analysis of Gene Expression assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'RNA extract'))) and ('has_specified_input' some
('RNA extract' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0000537
copy number variation profiling
'copy number variation profiling' SubClassOf 'achieves_planned_objective' some 'assay objective'
'copy number variation profiling' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'genetic characteristics information'))
'copy number variation profiling' SubClassOf 'has_specified_output' some 'measurement datum'
'copy number variation profiling' SubClassOf 'has_specified_output' some ('is about' some 'genetic characteristics information')
http://purl.obolibrary.org/obo/OBI_0000615
protein expression profiling
'protein expression profiling' SubClassOf 'achieves_planned_objective' some 'assay objective'
'protein expression profiling' SubClassOf ('realizes' some
('evaluant role' and ('role of' some
('specimen' and ('has part' some 'protein'))))) and ('has_specified_input' some
(('specimen' and ('has part' some 'protein')) and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0001946
forward PCR primer
'forward PCR primer' SubClassOf ('has part' some 'deoxyribonucleic acid') and ('is_specified_input_of' some
('polymerase chain reaction' or 'real time polymerase chain reaction assay' or 'real time reverse-transcription polymerase chain reaction assay'))
http://purl.obolibrary.org/obo/OBI_0001951
reverse PCR primer
'reverse PCR primer' SubClassOf ('has part' some 'deoxyribonucleic acid') and ('is_specified_input_of' some
('real time polymerase chain reaction assay' or 'real time reverse-transcription polymerase chain reaction assay'))
http://purl.obolibrary.org/obo/OBI_0001954
ChIP assay
'ChIP assay' SubClassOf 'has part' some 'immunoprecipitation'
'ChIP assay' SubClassOf 'epigenetic modification assay'
'ChIP assay' SubClassOf 'has_specified_input' some
('specimen' and (('has part' some 'deoxyribonucleic acid') and ('has part' some 'protein complex')))
'ChIP assay' SubClassOf 'achieves_planned_objective' some 'protein and DNA interaction identification objective'
'ChIP assay' SubClassOf 'has_specified_output' some
('information content entity' and ('is about' some
('chromatin remodeling' or 'regulation of molecular function, epigenetic' or 'sequence-specific DNA binding' or 'transcription factor binding site')))
'ChIP assay' SubClassOf 'assay using chromatin immunoprecipitation'
'ChIP assay' SubClassOf 'achieves_planned_objective' some 'epigenetic modification identification objective'
'ChIP assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'deoxyribonucleic acid'))
'ChIP assay' EquivalentTo 'assay' and (('realizes' some
('evaluant role' and ('role of' some ('has part' some http://purl.obolibrary.org/obo/GO_0000785)))) and ('has_specified_input' some
(('has part' some http://purl.obolibrary.org/obo/GO_0000785) and ('has role' some 'evaluant role')))) and ('has part' some 'chromatin immunoprecipitation') and ('achieves_planned_objective' some
('epigenetic modification identification objective' or 'protein and DNA interaction identification objective'))
'ChIP assay' SubClassOf 'assay'
http://purl.obolibrary.org/obo/OBI_0000623
NMR spectroscopy
'NMR spectroscopy' SubClassOf 'achieves_planned_objective' some 'assay objective'
http://purl.obolibrary.org/obo/OBI_0000626
DNA sequencing
'DNA sequencing' SubClassOf 'has participant' some 'DNA sequencer'
'DNA sequencing' EquivalentTo ('has_specified_input' some
('deoxyribonucleic acid' and ('has role' some 'evaluant role'))) and ('has_specified_output' some 'DNA sequence data')
'DNA sequencing' SubClassOf 'achieves_planned_objective' some 'assay objective'
'DNA sequencing' EquivalentTo 'sequencing assay' and (('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')) and (('realizes' some
('evaluant role' and ('role of' some 'DNA extract'))) and ('has_specified_input' some
('DNA extract' and ('has role' some 'evaluant role')))) and ('has_specified_output' some 'DNA sequence data')
http://purl.obolibrary.org/obo/OBI_0001956
assay using chromatin immunoprecipitation
'assay using chromatin immunoprecipitation' EquivalentTo ('has part' some 'immunoprecipitation') and ('achieves_planned_objective' some
('epigenetic modification identification objective' or 'protein and DNA interaction identification objective'))
'assay using chromatin immunoprecipitation' SubClassOf 'has part' some 'chromatin immunoprecipitation'
'assay using chromatin immunoprecipitation' SubClassOf 'achieves_planned_objective' some
('epigenetic modification identification objective' or 'protein and DNA interaction identification objective')
http://purl.obolibrary.org/obo/OBI_0001960
taxonomic diversity assessment by targeted gene survey
'taxonomic diversity assessment by targeted gene survey' SubClassOf 'has_specified_output' some
('sequence data' and ('is about' some 'population'))
'taxonomic diversity assessment by targeted gene survey' SubClassOf 'has_specified_output' some 'sequence data'
'taxonomic diversity assessment by targeted gene survey' SubClassOf 'has_specified_output' some ('is about' some 'population')
http://purl.obolibrary.org/obo/OBI_0000634
DNA methylation profiling assay
'DNA methylation profiling assay' SubClassOf 'analyte assay'
'DNA methylation profiling assay' EquivalentTo 'has_specified_output' some
('information content entity' and ('is about' some 'regulation of DNA methylation'))
'DNA methylation profiling assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'deoxyribonucleic acid'))
'DNA methylation profiling assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'DNA extract'))) and ('has_specified_input' some
('DNA extract' and ('has role' some 'evaluant role')))
'DNA methylation profiling assay' SubClassOf 'has_specified_output' some 'data item'
'DNA methylation profiling assay' SubClassOf 'has_specified_output' some ('is about' some 'DNA methylation')
http://purl.obolibrary.org/obo/OBI_0000630
hematology
'hematology' SubClassOf 'achieves_planned_objective' some 'assay objective'
http://purl.obolibrary.org/obo/OBI_0001966
sequence library deconvolution
'sequence library deconvolution' SubClassOf 'preceded by' some
('DNA sequencing' and ('has_specified_input' some 'multiplexed sequencing library'))
http://purl.obolibrary.org/obo/OBI_0001979
fluorescence quenching binding assay
'fluorescence quenching binding assay' SubClassOf 'fluorescence detection binding assay'
'fluorescence quenching binding assay' SubClassOf 'binding assay'
http://purl.obolibrary.org/obo/OBI_0001919
Carbon-copy chromosome conformation capture assay
'Carbon-copy chromosome conformation capture assay' SubClassOf 'has participant' some 'DNA sequencer'
'Carbon-copy chromosome conformation capture assay' SubClassOf 'sequencing assay'
'Carbon-copy chromosome conformation capture assay' SubClassOf 'realizes' some
('evaluant role' and ('role of' some 'deoxyribonucleic acid'))
'Carbon-copy chromosome conformation capture assay' SubClassOf 'has part' some 'cross linking'
'Carbon-copy chromosome conformation capture assay' SubClassOf 'has part' some 'immunoprecipitation'
'Carbon-copy chromosome conformation capture assay' SubClassOf 'DNA sequencing'
'Carbon-copy chromosome conformation capture assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
'Carbon-copy chromosome conformation capture assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'DNA extract'))) and ('has_specified_input' some
('DNA extract' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0001915
DNA replication timing by array assay
'DNA replication timing by array assay' SubClassOf 'has participant' some 'flow cytometer sorter'
'DNA replication timing by array assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'DNA replication'))
'DNA replication timing by array assay' SubClassOf 'realizes' some
('evaluant role' and ('role of' some 'deoxyribonucleic acid'))
'DNA replication timing by array assay' SubClassOf 'has participant' some 'DNA microarray'
'DNA replication timing by array assay' SubClassOf ('realizes' some
('function' and ('inheres in' some
('flow cytometer sorter' and 'DNA microarray')))) and ('has_specified_input' some
('flow cytometer sorter' and 'DNA microarray'))
'DNA replication timing by array assay' SubClassOf 'has_specified_output' some ('is about' some 'DNA replication')
'DNA replication timing by array assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'DNA extract'))) and ('has_specified_input' some
('DNA extract' and ('has role' some 'evaluant role')))
'DNA replication timing by array assay' SubClassOf 'has_specified_output' some 'measurement datum'
http://purl.obolibrary.org/obo/OBI_0001918
RNA-binding protein immunoprecipitation array profiling assay
'RNA-binding protein immunoprecipitation array profiling assay' SubClassOf 'realizes' some
('evaluant role' and ('role of' some 'protein complex'))
'RNA-binding protein immunoprecipitation array profiling assay' SubClassOf 'achieves_planned_objective' some 'analyte measurement objective'
'RNA-binding protein immunoprecipitation array profiling assay' SubClassOf 'has participant' some 'DNA microarray'
'RNA-binding protein immunoprecipitation array profiling assay' SubClassOf 'analyte assay'
'RNA-binding protein immunoprecipitation array profiling assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA microarray'))) and ('has_specified_input' some 'DNA microarray')
'RNA-binding protein immunoprecipitation array profiling assay' SubClassOf 'microarray assay'
'RNA-binding protein immunoprecipitation array profiling assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'protein complex'))) and ('has_specified_input' some
('protein complex' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0001920
DNA replication timing by sequencing assay
'DNA replication timing by sequencing assay' SubClassOf 'has_specified_output' some
('information content entity' and ('is about' some 'DNA replication'))
'DNA replication timing by sequencing assay' SubClassOf 'has participant' some 'DNA sequencer'
'DNA replication timing by sequencing assay' SubClassOf 'realizes' some
('evaluant role' and ('role of' some 'deoxyribonucleic acid'))
'DNA replication timing by sequencing assay' SubClassOf 'has participant' some 'flow cytometer sorter'
'DNA replication timing by sequencing assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'DNA extract'))) and ('has_specified_input' some
('DNA extract' and ('has role' some 'evaluant role')))
'DNA replication timing by sequencing assay' SubClassOf 'has_specified_output' some ('is about' some 'DNA replication')
'DNA replication timing by sequencing assay' SubClassOf ('realizes' some
('function' and ('inheres in' some
('flow cytometer sorter' and 'DNA microarray')))) and ('has_specified_input' some
('flow cytometer sorter' and 'DNA microarray'))
http://purl.obolibrary.org/obo/OBI_0001921
RNA-binding protein immunoprecipitation tiling array profiling
'RNA-binding protein immunoprecipitation tiling array profiling' SubClassOf 'has participant' some 'tiling microarray'
'RNA-binding protein immunoprecipitation tiling array profiling' SubClassOf ('realizes' some
('function' and ('inheres in' some 'tiling microarray'))) and ('has_specified_input' some 'tiling microarray')
http://purl.obolibrary.org/obo/OBI_0001922
microRNA profiling by high throughput sequencing assay
'microRNA profiling by high throughput sequencing assay' SubClassOf 'realizes' some
('evaluant role' and ('role of' some 'ribonucleic acid'))
'microRNA profiling by high throughput sequencing assay' SubClassOf 'RNA-seq assay'
'microRNA profiling by high throughput sequencing assay' SubClassOf 'has_specified_output' some
('measured expression level' and ('is about' some 'miRNA'))
'microRNA profiling by high throughput sequencing assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'RNA extract'))) and ('has_specified_input' some
('RNA extract' and ('has role' some 'evaluant role')))
'microRNA profiling by high throughput sequencing assay' SubClassOf 'has part' some 'sequencing assay'
'microRNA profiling by high throughput sequencing assay' SubClassOf 'has_specified_output' some 'measured expression level'
'microRNA profiling by high throughput sequencing assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
'microRNA profiling by high throughput sequencing assay' SubClassOf 'has_specified_output' some ('is about' some 'miRNA')
http://purl.obolibrary.org/obo/OBI_0001923
protein sequencing by tandem mass spectrometry assay
'protein sequencing by tandem mass spectrometry assay' SubClassOf 'has participant' some 'tandem mass spectrometer'
'protein sequencing by tandem mass spectrometry assay' SubClassOf 'realizes' some
('evaluant role' and ('role of' some 'protein'))
'protein sequencing by tandem mass spectrometry assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'protein'))) and ('has_specified_input' some
('protein' and ('has role' some 'evaluant role')))
'protein sequencing by tandem mass spectrometry assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'tandem mass spectrometer'))) and ('has_specified_input' some 'tandem mass spectrometer')
http://purl.obolibrary.org/obo/OBI_0001924
micrococcal nuclease digestion followed by high throughput sequencing assay
'micrococcal nuclease digestion followed by high throughput sequencing assay' SubClassOf 'sequencing assay'
'micrococcal nuclease digestion followed by high throughput sequencing assay' SubClassOf 'has participant' some 'DNA sequencer'
'micrococcal nuclease digestion followed by high throughput sequencing assay' SubClassOf 'realizes' some
('evaluant role' and ('role of' some 'deoxyribonucleic acid'))
'micrococcal nuclease digestion followed by high throughput sequencing assay' SubClassOf 'DNA sequencing'
'micrococcal nuclease digestion followed by high throughput sequencing assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'DNA extract'))) and ('has_specified_input' some
('DNA extract' and ('has role' some 'evaluant role')))
'micrococcal nuclease digestion followed by high throughput sequencing assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
http://purl.obolibrary.org/obo/OBI_0001925
chromatin immunoprecipitation with exonuclease sequencing assay
'chromatin immunoprecipitation with exonuclease sequencing assay' SubClassOf 'has participant' some 'sonicator'
'chromatin immunoprecipitation with exonuclease sequencing assay' SubClassOf 'realizes' some
('evaluant role' and ('role of' some 'protein complex'))
'chromatin immunoprecipitation with exonuclease sequencing assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'sonicator'))) and ('has_specified_input' some 'sonicator')
http://purl.obolibrary.org/obo/OBI_0001926
microRNA profiling assay
'microRNA profiling assay' SubClassOf 'realizes' some
('evaluant role' and ('role of' some 'ribonucleic acid'))
'microRNA profiling assay' EquivalentTo 'transcription profiling assay' and ('has_specified_output' some
('measured expression level' and ('is about' some 'miRNA')))
'microRNA profiling assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'RNA extract'))) and ('has_specified_input' some
('RNA extract' and ('has role' some 'evaluant role')))
'microRNA profiling assay' SubClassOf 'has_specified_output' some 'measured expression level'
'microRNA profiling assay' SubClassOf 'has_specified_output' some ('is about' some 'miRNA')
http://purl.obolibrary.org/obo/OBI_0001145
3D structure determination of bound complex assay
'3D structure determination of bound complex assay' SubClassOf 'binding assay'
http://purl.obolibrary.org/obo/OBI_0001146
binding assay
'binding assay' EquivalentTo 'assay' and ('has_specified_output' some ('is about' some 'binding'))
'binding assay' SubClassOf 'has_specified_output' some ('is about' some 'binding')
'binding assay' SubClassOf 'has_specified_output' some 'binding datum'
http://purl.obolibrary.org/obo/OBI_0001158
age measurement assay
'age measurement assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'organism'))) and ('has_specified_input' some
('organism' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0001166
validation by real time PCR design
'validation by real time PCR design' SubClassOf 'has part' some
('assay validation objective' and ('objective_achieved_by' some 'real time polymerase chain reaction assay'))
http://purl.obolibrary.org/obo/OBI_0001167
age measurement datum
'age measurement datum' SubClassOf 'is_specified_output_of' some 'age measurement assay'
http://purl.obolibrary.org/obo/OBI_0001162
validation by reverse transcription PCR design
'validation by reverse transcription PCR design' SubClassOf 'has part' some
('assay validation objective' and ('objective_achieved_by' some 'reverse transcription polymerase chain reaction assay'))
http://purl.obolibrary.org/obo/OBI_0001177
RNA sequencing
'RNA sequencing' EquivalentTo ('has_specified_input' some
('ribonucleic acid' and ('has role' some 'evaluant role'))) and ('has_specified_output' some
('information content entity' and ('is about' some 'primary structure of RNA molecule')))
'RNA sequencing' EquivalentTo 'sequencing assay' and (('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')) and (('realizes' some
('evaluant role' and ('role of' some 'RNA extract'))) and ('has_specified_input' some
('RNA extract' and ('has role' some 'evaluant role')))) and ('has part' some 'artificially induced reverse transcription') and ('has_specified_input' some 'RNA extract') and ('has_specified_output' some 'sequence data') and ('has_specified_output' some ('is about' some 'primary structure of RNA molecule'))
http://purl.obolibrary.org/obo/OBI_0001179
epitope protection from infectious challenge experiment
'epitope protection from infectious challenge experiment' SubClassOf 'has part' some 'pathogen challenge'
http://purl.obolibrary.org/obo/OBI_0001170
reverse transcription polymerase chain reaction assay
'reverse transcription polymerase chain reaction assay' SubClassOf 'has_specified_output' some
('information content entity' and ('is about' some 'gene expression'))
'reverse transcription polymerase chain reaction assay' SubClassOf 'has_specified_input' some
('ribonucleic acid' and ('has role' some 'evaluant role'))
'reverse transcription polymerase chain reaction assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'RNA extract'))) and ('has_specified_input' some
('RNA extract' and ('has role' some 'evaluant role')))
'reverse transcription polymerase chain reaction assay' SubClassOf 'has_specified_output' some ('is about' some 'gene expression')
'reverse transcription polymerase chain reaction assay' SubClassOf 'has_specified_input' some 'RNA extract'
'reverse transcription polymerase chain reaction assay' SubClassOf 'has_specified_output' some 'information content entity'
http://purl.obolibrary.org/obo/OBI_0002443
methidiumpropyl-EDTA-iron(II) footprinting assay
'methidiumpropyl-EDTA-iron(II) footprinting assay' SubClassOf 'binding assay'
http://purl.obolibrary.org/obo/OBI_0002445
transcription start site mapping by primer extension assay
'transcription start site mapping by primer extension assay' SubClassOf 'sequencing assay'
http://purl.obolibrary.org/obo/OBI_0000699
survival assessment
'survival assessment' SubClassOf 'has_specified_output' some
('survival rate' and ('is about' some 'organism'))
'survival assessment' SubClassOf 'achieves_planned_objective' some 'assay objective'
'survival assessment' SubClassOf 'has_specified_output' some 'survival rate'
'survival assessment' SubClassOf 'has_specified_output' some ('is about' some 'organism')
http://purl.obolibrary.org/obo/OBI_0000697
Helicos sequencing
'Helicos sequencing' SubClassOf 'has participant' some 'HeliScope Single Molecule Sequencer'
'Helicos sequencing' SubClassOf 'immediately preceded by' some 'immobilization'
'Helicos sequencing' SubClassOf ('realizes' some
('function' and ('inheres in' some 'HeliScope Single Molecule Sequencer'))) and ('has_specified_input' some 'HeliScope Single Molecule Sequencer')
http://purl.obolibrary.org/obo/OBI_0000695
chain termination sequencing
'chain termination sequencing' SubClassOf 'has participant' some
('ABI 377 automated sequencer' or 'Li-Cor 4300 DNA Analysis System')
'chain termination sequencing' SubClassOf ('realizes' some
('function' and ('inheres in' some
('ABI 377 automated sequencer' or 'Li-Cor 4300 DNA Analysis System')))) and ('has_specified_input' some
('ABI 377 automated sequencer' or 'Li-Cor 4300 DNA Analysis System'))
http://purl.obolibrary.org/obo/OBI_0000693
MeDIP-seq assay
'MeDIP-seq assay' SubClassOf 'has part' some
('Helicos sequencing' or 'SOLiD sequencing' or 'Solexa sequencing' or 'pyrosequencing')
'MeDIP-seq assay' SubClassOf 'has_specified_output' some
('sequence data' and ('is about' some
('primary structure of DNA macromolecule' and ('is about' some 'regulation of DNA methylation') and ('is about' some
('deoxyribonucleic acid' and ('has quality' some 'DNA residue methylation'))))))
'MeDIP-seq assay' SubClassOf 'has_specified_output' some
('sequence data' and ('is about' some 'regulation of DNA methylation'))
'MeDIP-seq assay' SubClassOf 'has_specified_input' some
('deoxyribonucleic acid' and ('has role' some 'evaluant role'))
'MeDIP-seq assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'MeDIP-seq assay' SubClassOf 'has part' some 'immunoprecipitation'
'MeDIP-seq assay' SubClassOf 'assay using chromatin immunoprecipitation'
'MeDIP-seq assay' SubClassOf 'has part' some 'sequencing assay'
'MeDIP-seq assay' SubClassOf 'has part' some 'chromatin immunoprecipitation'
'MeDIP-seq assay' SubClassOf 'has_specified_output' some 'sequence data'
'MeDIP-seq assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
'MeDIP-seq assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'DNA extract'))) and ('has_specified_input' some
('DNA extract' and ('has role' some 'evaluant role')))
'MeDIP-seq assay' SubClassOf 'achieves_planned_objective' some 'epigenetic modification identification objective'
'MeDIP-seq assay' SubClassOf 'has_specified_output' some ('is about' some 'regulation of DNA methylation')
'MeDIP-seq assay' SubClassOf 'ChIP assay'
'MeDIP-seq assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some ('has part' some http://purl.obolibrary.org/obo/GO_0000785)))) and ('has_specified_input' some
(('has part' some http://purl.obolibrary.org/obo/GO_0000785) and ('has role' some 'evaluant role')))
'MeDIP-seq assay' SubClassOf 'has_specified_input' some 'DNA extract'
http://purl.obolibrary.org/obo/OBI_0001989
purified MHC competitive binding assay measuring equilibrium dissociation constant [KD] of a MHC:ligand complex using radioactivity detection
'purified MHC competitive binding assay measuring equilibrium dissociation constant [KD] of a MHC:ligand complex using radioactivity detection' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0000730
pyrosequencing
'pyrosequencing' SubClassOf 'has participant' some
('454 Genome Sequence 20' or '454 Genome Sequencer FLX')
'pyrosequencing' SubClassOf ('realizes' some
('function' and ('inheres in' some
('454 Genome Sequence 20' or '454 Genome Sequencer FLX')))) and ('has_specified_input' some
('454 Genome Sequence 20' or '454 Genome Sequencer FLX'))
http://purl.obolibrary.org/obo/OBI_0000743
immune response assay
'immune response assay' EquivalentTo ('has_specified_output' some
('measurement datum' and ('is about' some 'immune response'))) and ('achieves_planned_objective' some 'assay objective')
'immune response assay' SubClassOf 'has_specified_output' some ('is about' some 'immune response')
'immune response assay' SubClassOf 'has_specified_output' some 'measurement datum'
http://purl.obolibrary.org/obo/OBI_0000748
bisulfite sequencing
'bisulfite sequencing' SubClassOf 'DNA methylation profiling by high throughput sequencing assay'
'bisulfite sequencing' SubClassOf 'has_specified_input' some
('deoxyribonucleic acid' and ('has role' some 'evaluant role'))
'bisulfite sequencing' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'DNA residue methylation'))
'bisulfite sequencing' SubClassOf 'has participant' some 'DNA sequencer'
'bisulfite sequencing' SubClassOf 'realizes' some
('reagent role' and ('inheres in' some 'hydrogensulfite'))
'bisulfite sequencing' SubClassOf 'has_specified_output' some
('DNA sequence data' and ('is about' some 'regulation of DNA methylation'))
'bisulfite sequencing' SubClassOf 'DNA methylation profiling assay'
'bisulfite sequencing' SubClassOf 'has_specified_output' some
('measurement datum' and 'DNA sequence data')
'bisulfite sequencing' SubClassOf 'has_specified_output' some ('is about' some 'regulation of DNA methylation')
'bisulfite sequencing' SubClassOf 'has_specified_input' some 'DNA extract'
'bisulfite sequencing' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'DNA extract'))) and ('has_specified_input' some
('DNA extract' and ('has role' some 'evaluant role')))
'bisulfite sequencing' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
http://purl.obolibrary.org/obo/OBI_0000706
SOLiD sequencing
'SOLiD sequencing' SubClassOf 'immediately preceded by' some
('immobilization' and ('immediately preceded by' some 'vector mediated amplification'))
'SOLiD sequencing' SubClassOf 'has participant' some 'AB SOLiD System'
'SOLiD sequencing' SubClassOf 'has_specified_input' some
('paired-end library' or 'single fragment library')
'SOLiD sequencing' SubClassOf 'has_specified_input' some 'DNA ligase'
'SOLiD sequencing' SubClassOf 'has_specified_input' some
('paired-end library' or 'single fragment library' or 'DNA ligase')
'SOLiD sequencing' SubClassOf ('realizes' some
('function' and ('inheres in' some 'AB SOLiD System'))) and ('has_specified_input' some 'AB SOLiD System')
http://purl.obolibrary.org/obo/OBI_0000705
Edman degradation
'Edman degradation' SubClassOf 'has_specified_output' some
('information content entity' and ('is about' some 'polypeptide'))
'Edman degradation' SubClassOf 'has_specified_output' some ('is about' some 'polypeptide')
'Edman degradation' SubClassOf 'has_specified_output' some 'information content entity'
http://purl.obolibrary.org/obo/OBI_0000716
ChIP-seq assay
'ChIP-seq assay' SubClassOf 'has part' some 'library preparation'
'ChIP-seq assay' SubClassOf 'has part' some 'immunoprecipitation'
'ChIP-seq assay' SubClassOf 'has part' some 'DNA sequencing'
'ChIP-seq assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'deoxyribonucleic acid'))
'ChIP-seq assay' SubClassOf 'epigenetic modification assay'
'ChIP-seq assay' SubClassOf 'has_specified_output' some
('information content entity' and ('is about' some
('chromatin remodeling' or 'regulation of molecular function, epigenetic' or 'sequence-specific DNA binding' or 'transcription factor binding site')))
'ChIP-seq assay' SubClassOf 'achieves_planned_objective' some 'protein and DNA interaction identification objective'
'ChIP-seq assay' SubClassOf 'has_specified_input' some
('specimen' and (('has part' some 'deoxyribonucleic acid') and ('has part' some 'protein complex')))
'ChIP-seq assay' SubClassOf 'achieves_planned_objective' some 'epigenetic modification identification objective'
'ChIP-seq assay' SubClassOf 'has participant' some 'DNA sequencer'
'ChIP-seq assay' SubClassOf 'assay using chromatin immunoprecipitation'
'ChIP-seq assay' SubClassOf 'has_specified_output' some 'DNA sequence data'
'ChIP-seq assay' SubClassOf 'sequencing assay'
'ChIP-seq assay' EquivalentTo 'ChIP assay' and (('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')) and ('has part' some 'DNA sequencing')
'ChIP-seq assay' SubClassOf 'ChIP assay'
http://purl.obolibrary.org/obo/OBI_0000721
glucose tolerance test
'glucose tolerance test' SubClassOf 'has_specified_output' some
('information content entity' and ('is_proxy_for' some 'Insulin resistance'))
'glucose tolerance test' SubClassOf 'achieves_planned_objective' some 'assay objective'
'glucose tolerance test' SubClassOf 'has part' some
('administering substance in vivo' and ('has_specified_input' some 'glucose'))
'glucose tolerance test' SubClassOf 'has part' some
('measuring glucose concentration in blood serum' and ('realizes' some ('concretizes' some 'study design dependent variable')))
'glucose tolerance test' SubClassOf 'realizes' some ('concretizes' some 'study design independent variable')
'glucose tolerance test' SubClassOf 'has part' some
('data transformation' and ('has_specified_input' some 'measurement datum') and ('has_specified_output' some 'graph'))
'glucose tolerance test' SubClassOf 'has_specified_output' some ('is about' some 'Insulin resistance')
'glucose tolerance test' SubClassOf 'has part' some 'measuring glucose concentration in blood serum'
'glucose tolerance test' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'blood serum specimen'))) and ('has_specified_input' some
('blood serum specimen' and ('has role' some 'evaluant role')))
'glucose tolerance test' SubClassOf 'has part' some 'administering substance in vivo'
http://purl.obolibrary.org/obo/OBI_0000724
Solexa sequencing
'Solexa sequencing' SubClassOf 'has participant' some 'Illumina Genome Analyzer II'
'Solexa sequencing' SubClassOf 'immediately preceded by' some
('immobilization' and ('immediately preceded by' some 'vector mediated amplification'))
'Solexa sequencing' SubClassOf ('realizes' some
('function' and ('inheres in' some 'Illumina Genome Analyzer II'))) and ('has_specified_input' some 'Illumina Genome Analyzer II')
http://purl.obolibrary.org/obo/OBI_0001189
epitope protection experiment based on survival
'epitope protection experiment based on survival' SubClassOf 'has part' some 'survival assessment'
http://purl.obolibrary.org/obo/OBI_0001186
epitope protection from infectious challenge experiment based on pathogen burden
'epitope protection from infectious challenge experiment based on pathogen burden ' SubClassOf 'has part' some 'infectious agent detection assay'
http://purl.obolibrary.org/obo/OBI_0001187
infectious agent detection assay
'infectious agent detection assay' SubClassOf 'has_specified_output' some ('is about' some 'infection')
http://purl.obolibrary.org/obo/OBI_0001197
comparative genome hybridization by array design
'comparative genome hybridization by array design' SubClassOf 'is concretized as' some ('realized in' some
(('has part' some 'comparative genomic hybridization by array assay') and ('has participant' some 'DNA microarray')))
http://purl.obolibrary.org/obo/OBI_0001266
DNA methylation profiling by high throughput sequencing assay
'DNA methylation profiling by high throughput sequencing assay' EquivalentTo 'DNA methylation profiling assay' and ('has participant' some 'DNA sequencer')
'DNA methylation profiling by high throughput sequencing assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
http://purl.obolibrary.org/obo/OBI_0001278
DNA methylation profiling by array design
'DNA methylation profiling by array design' SubClassOf 'is concretized as' some ('realized in' some
(('has part' some 'DNA methylation profiling by array assay') and ('has participant' some 'DNA microarray')))
http://purl.obolibrary.org/obo/OBI_0001271
RNA-seq assay
'RNA-seq assay' SubClassOf 'has part' some 'polyA RNA extraction'
'RNA-seq assay' SubClassOf 'has_specified_output' some
('sequence data' and ('is about' some 'gene expression'))
'RNA-seq assay' SubClassOf 'has participant' some 'DNA sequencer'
'RNA-seq assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'ribonucleic acid'))
'RNA-seq assay' SubClassOf 'has_specified_output' some 'sequence data'
'RNA-seq assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
'RNA-seq assay' SubClassOf 'has_specified_output' some ('is about' some 'gene expression')
'RNA-seq assay' SubClassOf ('realizes' some
('analyte role' and ('inheres in' some 'ribonucleic acid'))) and ('has_specified_input' some 'ribonucleic acid')
http://purl.obolibrary.org/obo/OBI_0001274
genotyping by array assay
'genotyping by array assay' SubClassOf 'has participant' some 'DNA microarray'
'genotyping by array assay' SubClassOf 'microarray assay'
'genotyping by array assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA microarray'))) and ('has_specified_input' some 'DNA microarray')
http://purl.obolibrary.org/obo/OBI_0001282
translation profiling assay
'translation profiling assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'ribonucleic acid'))
http://purl.obolibrary.org/obo/OBI_0001286
RNAi profiling by array design
'RNAi profiling by array design' SubClassOf 'is concretized as' some ('realized in' some
(('has part' some 'RNAi profiling by array assay') and ('has participant' some 'DNA microarray')))
http://purl.obolibrary.org/obo/OBI_0001290
transcription profiling by array design
'transcription profiling by array design' SubClassOf 'transcription profiling design'
'transcription profiling by array design' SubClassOf 'is concretized as' some ('realized in' some
(('has part' some 'transcription profiling by array assay') and ('has participant' some 'DNA microarray')))
'transcription profiling by array design' SubClassOf 'study design'
http://purl.obolibrary.org/obo/OBI_0001221
ChIP-chip by SNP array assay
'ChIP-chip by SNP array assay' SubClassOf 'has participant' some 'SNP microarray'
'ChIP-chip by SNP array assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'SNP microarray'))) and ('has_specified_input' some 'SNP microarray')
http://purl.obolibrary.org/obo/OBI_0001235
transcription profiling by tiling array assay
'transcription profiling by tiling array assay' SubClassOf 'has_specified_input' some
('specimen' and ('has part' some 'ribonucleic acid'))
'transcription profiling by tiling array assay' SubClassOf 'has participant' some 'tiling microarray'
'transcription profiling by tiling array assay' SubClassOf 'transcription profiling assay'
'transcription profiling by tiling array assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'ribonucleic acid'))
'transcription profiling by tiling array assay' SubClassOf 'achieves_planned_objective' some 'transcription profiling identification objective'
'transcription profiling by tiling array assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'gene expression'))
'transcription profiling by tiling array assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'tiling microarray'))) and ('has_specified_input' some 'tiling microarray')
'transcription profiling by tiling array assay' SubClassOf 'transcription profiling by array assay'
http://purl.obolibrary.org/obo/OBI_0001239
transcription profiling by high throughput sequencing design
'transcription profiling by high throughput sequencing design' SubClassOf 'transcription profiling design'
'transcription profiling by high throughput sequencing design' SubClassOf 'is concretized as' some ('realized in' some
(('has part' some 'RNA-seq assay') and ('has participant' some 'DNA sequencer')))
'transcription profiling by high throughput sequencing design' SubClassOf 'study design'
http://purl.obolibrary.org/obo/OBI_0001247
genotyping by high throughput sequencing assay
'genotyping by high throughput sequencing assay' SubClassOf 'has participant' some 'DNA sequencer'
'genotyping by high throughput sequencing assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
http://purl.obolibrary.org/obo/OBI_0001248
ChIP-chip assay
'ChIP-chip assay' SubClassOf 'has participant' some 'DNA microarray'
'ChIP-chip assay' SubClassOf 'achieves_planned_objective' some 'protein and DNA interaction identification objective'
'ChIP-chip assay' SubClassOf 'assay using chromatin immunoprecipitation'
'ChIP-chip assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'deoxyribonucleic acid'))
'ChIP-chip assay' SubClassOf 'has part' some 'immunoprecipitation'
'ChIP-chip assay' SubClassOf 'has_specified_input' some
('specimen' and ('has part' some 'deoxyribonucleic acid') and ('has part' some 'protein complex'))
'ChIP-chip assay' SubClassOf 'has_specified_output' some
('information content entity' and ('is about' some
('chromatin remodeling' or 'regulation of molecular function, epigenetic' or 'sequence-specific DNA binding' or 'transcription factor binding site')))
'ChIP-chip assay' SubClassOf 'ChIP assay'
'ChIP-chip assay' EquivalentTo 'ChIP assay' and (('realizes' some
('function' and ('inheres in' some 'DNA microarray'))) and ('has_specified_input' some 'DNA microarray')) and ('has part' some 'microarray assay')
http://purl.obolibrary.org/obo/OBI_0002571
polyA-selected RNA sequencing assay
'polyA-selected RNA sequencing assay' SubClassOf 'has_specified_input' some 'polyA RNA extract'
http://purl.obolibrary.org/obo/OBI_0002572
polyA-depleted RNA sequencing assay
'polyA-depleted RNA sequencing assay' SubClassOf 'has_specified_input' some 'polyA depleted RNA extract'
http://purl.obolibrary.org/obo/OBI_0001258
ChIP-seq design
'ChIP-seq design' SubClassOf 'is concretized as' some ('realized in' some
(('has part' some 'ChIP-seq assay') and ('has participant' some 'DNA sequencer')))
http://purl.obolibrary.org/obo/OBI_0001200
genotyping by high throughput sequencing design
'genotyping by high throughput sequencing design' SubClassOf 'is concretized as' some ('realized in' some
(('has part' some 'genotyping by high throughput sequencing assay') and ('has participant' some 'DNA sequencer')))
http://purl.obolibrary.org/obo/OBI_0000787
human antithrombin-III (AT-III) in blood assay
'human antithrombin-III (AT-III) in blood assay' SubClassOf ('has_specified_input' some 'blood serum specimen') and ('has_specified_output' some
('scalar measurement datum' and ('is about' some 'blood coagulation'))) and ('achieves_planned_objective' some 'analyte measurement objective')
'human antithrombin-III (AT-III) in blood assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some
('scattered molecular aggregate' and ('has grain' some 'antithrombin-III'))))
'human antithrombin-III (AT-III) in blood assay' SubClassOf 'has_specified_output' some 'scalar measurement datum'
'human antithrombin-III (AT-III) in blood assay' SubClassOf ('realizes' some
('analyte role' and ('inheres in' some
('scattered molecular aggregate' and ('has grain' some 'antithrombin-III'))))) and ('has_specified_input' some
('scattered molecular aggregate' and ('has grain' some 'antithrombin-III')))
'human antithrombin-III (AT-III) in blood assay' SubClassOf 'has_specified_output' some ('is about' some 'blood coagulation')
http://purl.obolibrary.org/obo/OBI_0000865
96-well neutralization assay
'96-well neutralization assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'multi-well plate'))) and ('has_specified_input' some 'multi-well plate')
http://purl.obolibrary.org/obo/OBI_0000860
northern blot analysis
'northern blot analysis' SubClassOf 'realizes' some
('complementary nucleotide probe role' and ('inheres in' some 'nucleic acid'))
'northern blot analysis' SubClassOf 'realizes' some
('evaluant role' and ('inheres in' some 'polyA RNA extract'))
'northern blot analysis' SubClassOf 'realizes' some
('analyte role' and ('inheres in' some
('scattered molecular aggregate' and ('has grain' only 'nucleic acid'))))
'northern blot analysis' SubClassOf 'achieves_planned_objective' some 'assay objective'
'northern blot analysis' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'gene expression'))
'northern blot analysis' SubClassOf 'has_specified_output' some 'measurement datum'
'northern blot analysis' SubClassOf ('realizes' some
('analyte role' and ('inheres in' some 'ribonucleic acid'))) and ('has_specified_input' some 'ribonucleic acid')
http://purl.obolibrary.org/obo/OBI_0000875
viral hemagglutination inhibition assay
'viral hemagglutination inhibition assay' EquivalentTo 'assay' and ('has_specified_input' some 'Viruses') and ('has_specified_output' some ('is about' some 'induced hemagglutination'))
'viral hemagglutination inhibition assay' SubClassOf 'has part' some 'induced hemagglutination'
'viral hemagglutination inhibition assay' SubClassOf ('realizes' some
('reagent role' and ('inheres in' some 'Viruses'))) and ('has_specified_input' some 'Viruses')
http://purl.obolibrary.org/obo/OBI_0000872
serum neutralization of viral infectivity assay
'serum neutralization of viral infectivity assay' SubClassOf 'achieves_planned_objective' some 'analyte measurement objective'
'serum neutralization of viral infectivity assay' SubClassOf 'has_specified_output' some ('is about' some 'immunoglobulin-mediated neutralization')
'serum neutralization of viral infectivity assay' SubClassOf ('realizes' some
('reagent role' and ('inheres in' some 'Viruses'))) and ('has_specified_input' some 'Viruses')
'serum neutralization of viral infectivity assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'blood serum specimen'))) and ('has_specified_input' some
('blood serum specimen' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0000871
viral hemagglutination assay
'viral hemagglutination assay' SubClassOf 'achieves_planned_objective' some 'analyte measurement objective'
'viral hemagglutination assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'Viruses'))
'viral hemagglutination assay' SubClassOf 'has_specified_output' some 'measurement datum'
http://purl.obolibrary.org/obo/OBI_0000870
single-nucleotide-resolution nucleic acid structure mapping assay
'single-nucleotide-resolution nucleic acid structure mapping assay' EquivalentTo ('has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of sequence macromolecule'))) and ('achieves_planned_objective' some 'assay objective')
'single-nucleotide-resolution nucleic acid structure mapping assay' EquivalentTo 'assay' and ('has_specified_output' some ('is about' some 'secondary structure of sequence macromolecule'))
http://purl.obolibrary.org/obo/OBI_0000812
measuring neural activity in the caudate nucleus
'measuring neural activity in the caudate nucleus' SubClassOf 'occurs in' some 'caudate nucleus'
'measuring neural activity in the caudate nucleus' SubClassOf 'realizes' some
('measure function' and ('inheres in' some 'micro electrode'))
http://purl.obolibrary.org/obo/OBI_0000820
activated partial thromboplastin time (aPTT) assay
'activated partial thromboplastin time (aPTT) assay' SubClassOf ('has_specified_input' some 'blood serum specimen') and ('has_specified_output' some
('scalar measurement datum' and ('is about' some 'blood coagulation')))
'activated partial thromboplastin time (aPTT) assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some
('blood specimen' or 'blood plasma specimen')))) and ('has_specified_input' some
(('blood specimen' or 'blood plasma specimen') and ('has role' some 'evaluant role')))
'activated partial thromboplastin time (aPTT) assay' SubClassOf 'has_specified_output' some 'time measurement datum'
'activated partial thromboplastin time (aPTT) assay' SubClassOf 'has_specified_output' some ('is about' some 'blood coagulation')
http://purl.obolibrary.org/obo/OBI_0000823
thrombin time assay
'thrombin time assay' SubClassOf ('has_specified_input' some 'blood serum specimen') and ('has_specified_output' some
('scalar measurement datum' and ('is about' some 'blood coagulation')))
'thrombin time assay' SubClassOf 'has_specified_output' some ('is about' some 'blood coagulation')
'thrombin time assay' SubClassOf 'has_specified_output' some 'scalar measurement datum'
http://purl.obolibrary.org/obo/OBI_0600047
sequencing assay
'sequencing assay' SubClassOf 'has_specified_input' some
(('deoxyribonucleic acid' or 'ribonucleic acid' or 'protein') and ('has role' some 'evaluant role'))
'sequencing assay' EquivalentTo ('has_specified_output' some 'sequence data') and ('achieves_planned_objective' some 'assay objective')
'sequencing assay' EquivalentTo 'assay' and (('realizes' some
('function' and ('inheres in' some
('nucleic acid sequencer' or 'protein sequencer' or 'DNA sequencer')))) and ('has_specified_input' some
('nucleic acid sequencer' or 'protein sequencer' or 'DNA sequencer'))) and (('realizes' some
('evaluant role' and ('role of' some
('nucleic acid extract' or ('has part' some 'protein'))))) and ('has_specified_input' some
(('nucleic acid extract' or ('has part' some 'protein')) and ('has role' some 'evaluant role')))) and ('has_specified_output' some 'sequence data') and ('has_specified_output' some ('is about' some 'region'))
http://purl.obolibrary.org/obo/OBI_0600017
detection of molecular label
'detection of molecular label' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'molecular-labeled material'))
'detection of molecular label' SubClassOf 'realizes' some 'molecular label role'
'detection of molecular label' SubClassOf 'achieves_planned_objective' some 'assay objective'
'detection of molecular label' SubClassOf 'has_specified_output' some ('is about' some 'molecular-labeled material')
'detection of molecular label' SubClassOf 'has_specified_output' some 'measurement datum'
http://purl.obolibrary.org/obo/OBI_0600025
substance detection
'substance detection' SubClassOf 'has_specified_input' some 'material entity'
'substance detection' SubClassOf 'achieves_planned_objective' some 'assay objective'
'substance detection' SubClassOf 'has participant' some
('chromatography device' or 'gamma counter' or 'ion detector' or 'flow cytometer analyzer' or 'photodetector' or 'array scanner' or 'spectrophotometer')
'substance detection' SubClassOf ('realizes' some
('function' and ('inheres in' some
('chromatography device' and 'gamma counter' and 'ion detector' and 'flow cytometer analyzer' and 'photodetector' and 'array scanner' and 'spectrophotometer')))) and ('has_specified_input' some
('chromatography device' and 'gamma counter' and 'ion detector' and 'flow cytometer analyzer' and 'photodetector' and 'array scanner' and 'spectrophotometer'))
'substance detection' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'material entity'))) and ('has_specified_input' some
('material entity' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0600026
longitudinal mass measurement assay
'longitudinal mass measurement assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'longitudinal mass measurement assay' SubClassOf 'has_specified_output' some 'measurement datum'
'longitudinal mass measurement assay' SubClassOf 'has_specified_input' some 'organism'
'longitudinal mass measurement assay' SubClassOf 'has_specified_output' some 'mass measurement datum'
'longitudinal mass measurement assay' SubClassOf 'has_specified_input' some 'material entity'
http://purl.obolibrary.org/obo/OBI_0600020
histology assay
'histology assay' SubClassOf 'has_specified_output' some
('information content entity' and ('is about' some
('cell' or 'organ section')))
'histology assay' SubClassOf 'has part' some 'collecting specimen from organism'
'histology assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'histology assay' SubClassOf 'has part' some 'staining'
'histology assay' SubClassOf 'has_specified_output' some ('is about' some
('cell' or 'organ section'))
http://purl.obolibrary.org/obo/OBI_0600002
tumor grading
'tumor grading' SubClassOf 'achieves_planned_objective' some 'assay objective'
'tumor grading' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'disease course'))
'tumor grading' SubClassOf 'has_specified_output' some ('is about' some 'disease course')
http://purl.obolibrary.org/obo/OBI_0600003
performing a clinical assessment
'performing a clinical assessment' SubClassOf 'achieves_planned_objective' some 'assay objective'
'performing a clinical assessment' SubClassOf 'assay'
'performing a clinical assessment' SubClassOf 'planned process'
http://purl.obolibrary.org/obo/OBI_0000802
prothrombin time assay
'prothrombin time assay' SubClassOf ('has_specified_input' some 'blood serum specimen') and ('has_specified_output' some
('scalar measurement datum' and ('is about' some 'blood coagulation')))
'prothrombin time assay' SubClassOf 'has_specified_output' some ('is about' some 'blood coagulation')
'prothrombin time assay' SubClassOf 'has_specified_output' some 'scalar measurement datum'
http://purl.obolibrary.org/obo/OBI_0000808
spectrolyse heparin antifactor-Xa assay
'spectrolyse heparin antifactor-Xa assay' SubClassOf ('has_specified_input' some 'blood serum specimen') and ('has_specified_output' some
('scalar measurement datum' and ('is about' some 'blood coagulation')))
'spectrolyse heparin antifactor-Xa assay' SubClassOf 'has_specified_output' some ('is about' some 'blood coagulation')
'spectrolyse heparin antifactor-Xa assay' SubClassOf 'has_specified_output' some 'scalar measurement datum'
http://purl.obolibrary.org/obo/OBI_0001387
genotyping by array design
'genotyping by array design' SubClassOf 'is concretized as' some ('realized in' some
(('has part' some 'genotyping by array assay') and ('has participant' some 'DNA microarray')))
http://purl.obolibrary.org/obo/OBI_0001393
comparative genomic hybridization by array assay
'comparative genomic hybridization by array assay' SubClassOf 'has participant' some 'DNA microarray'
'comparative genomic hybridization by array assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'deoxyribonucleic acid'))
'comparative genomic hybridization by array assay' SubClassOf ('realizes' some
('analyte role' and ('inheres in' some 'deoxyribonucleic acid'))) and ('has_specified_input' some 'deoxyribonucleic acid')
'comparative genomic hybridization by array assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA microarray'))) and ('has_specified_input' some 'DNA microarray')
'comparative genomic hybridization by array assay' SubClassOf 'microarray assay'
http://purl.obolibrary.org/obo/OBI_0001361
transcription profiling by RT-PCR assay
'transcription profiling by RT-PCR assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'ribonucleic acid'))
'transcription profiling by RT-PCR assay' SubClassOf 'has participant' some 'PCR instrument'
'transcription profiling by RT-PCR assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'gene expression'))
'transcription profiling by RT-PCR assay' SubClassOf 'achieves_planned_objective' some 'transcription profiling identification objective'
'transcription profiling by RT-PCR assay' SubClassOf 'has_specified_input' some
('specimen' and ('has part' some 'ribonucleic acid'))
'transcription profiling by RT-PCR assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'PCR instrument'))) and ('has_specified_input' some 'PCR instrument')
http://purl.obolibrary.org/obo/OBI_0001304
RNAi profiling by array assay
'RNAi profiling by array assay' SubClassOf 'has participant' some 'DNA microarray'
'RNAi profiling by array assay' SubClassOf 'analyte assay'
'RNAi profiling by array assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'ribonucleic acid'))
'RNAi profiling by array assay' SubClassOf ('realizes' some
('analyte role' and ('inheres in' some 'ribonucleic acid'))) and ('has_specified_input' some 'ribonucleic acid')
'RNAi profiling by array assay' SubClassOf 'microarray assay'
'RNAi profiling by array assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA microarray'))) and ('has_specified_input' some 'DNA microarray')
http://purl.obolibrary.org/obo/OBI_0001313
transcription profiling by RT-PCR design
'transcription profiling by RT-PCR design' SubClassOf 'transcription profiling design'
'transcription profiling by RT-PCR design' SubClassOf 'is concretized as' some ('realized in' some
(('has part' some 'transcription profiling by RT-PCR assay') and ('has participant' some 'PCR instrument')))
'transcription profiling by RT-PCR design' SubClassOf 'study design'
http://purl.obolibrary.org/obo/OBI_0001317
flow cytometry assay measuring cell-cell binding of a T cell epitope:MHC:TCR complex
'flow cytometry assay measuring cell-cell binding of a T cell epitope:MHC:TCR complex' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001318
proteomic profiling by array assay
'proteomic profiling by array assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'protein'))
'proteomic profiling by array assay' SubClassOf 'has participant' some 'protein microarray'
'proteomic profiling by array assay' SubClassOf 'analyte assay'
'proteomic profiling by array assay' SubClassOf 'microarray assay'
'proteomic profiling by array assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'protein microarray'))) and ('has_specified_input' some 'protein microarray')
'proteomic profiling by array assay' SubClassOf ('realizes' some
('analyte role' and ('inheres in' some 'protein'))) and ('has_specified_input' some 'protein')
http://purl.obolibrary.org/obo/OBI_0001323
microRNA profiling by array design
'microRNA profiling by array design' SubClassOf 'transcription profiling design'
'microRNA profiling by array design' SubClassOf 'is concretized as' some ('realized in' some
(('has part' some 'microRNA profiling by array assay') and ('has participant' some 'DNA microarray')))
'microRNA profiling by array design' SubClassOf 'study design'
http://purl.obolibrary.org/obo/OBI_0001332
DNA methylation profiling by array assay
'DNA methylation profiling by array assay' EquivalentTo 'DNA methylation profiling assay' and ('has participant' some 'DNA microarray')
'DNA methylation profiling by array assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA microarray'))) and ('has_specified_input' some 'DNA microarray')
http://purl.obolibrary.org/obo/OBI_0001335
microRNA profiling by array assay
'microRNA profiling by array assay' SubClassOf 'has participant' some 'DNA microarray'
'microRNA profiling by array assay' SubClassOf 'has_specified_output' some
('measured expression level' and ('is about' some 'miRNA'))
'microRNA profiling by array assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'ribonucleic acid'))
'microRNA profiling by array assay' SubClassOf 'has_specified_output' some 'measured expression level'
'microRNA profiling by array assay' SubClassOf ('realizes' some
('analyte role' and ('inheres in' some 'ribonucleic acid'))) and ('has_specified_input' some 'ribonucleic acid')
'microRNA profiling by array assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA microarray'))) and ('has_specified_input' some 'DNA microarray')
'microRNA profiling by array assay' SubClassOf 'has_specified_output' some ('is about' some 'miRNA')
http://purl.obolibrary.org/obo/OBI_0000897
DEPC structure mapping assay
'DEPC structure mapping assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'DEPC structure mapping assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'secondary structure of sequence macromolecule'))
'DEPC structure mapping assay' SubClassOf 'realizes' some
('reagent role' and ('inheres in' some 'diethyl pyrocarbonate'))
'DEPC structure mapping assay' SubClassOf 'has_specified_output' some 'measurement datum'
'DEPC structure mapping assay' SubClassOf 'has_specified_output' some ('is about' some 'secondary structure of sequence macromolecule')
http://purl.obolibrary.org/obo/OBI_0000892
Southern blot analysis
'Southern blot analysis' SubClassOf 'realizes' some
('analyte role' and ('inheres in' some
('scattered molecular aggregate' and ('has grain' only 'nucleic acid'))))
'Southern blot analysis' SubClassOf 'achieves_planned_objective' some 'assay objective'
'Southern blot analysis' SubClassOf 'realizes' some
('evaluant role' and ('inheres in' some 'high molecular weight DNA extract'))
'Southern blot analysis' SubClassOf 'realizes' some
('complementary nucleotide probe role' and ('inheres in' some 'nucleic acid'))
'Southern blot analysis' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'site'))
'Southern blot analysis' SubClassOf ('realizes' some
('analyte role' and ('inheres in' some 'deoxyribonucleic acid'))) and ('has_specified_input' some 'deoxyribonucleic acid')
'Southern blot analysis' SubClassOf 'has part' some 'detection of specific nucleic acid polymers with complementary probes'
'Southern blot analysis' SubClassOf 'has_specified_output' some 'measurement datum'
'Southern blot analysis' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'DNA extract'))) and ('has_specified_input' some
('DNA extract' and ('has role' some 'evaluant role')))
'Southern blot analysis' SubClassOf 'has part' some 'nucleic acid hybridization'
'Southern blot analysis' SubClassOf 'has_specified_output' some ('is about' some 'site')
http://purl.obolibrary.org/obo/OBI_0000975
cell-cell binding detection by flow cytometry assay
'cell-cell binding detection by flow cytometry assay' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0000992
DNA sequencing service
'DNA sequencing service' SubClassOf 'provides_service_consumer_with' some 'DNA sequencing'
'DNA sequencing service' EquivalentTo 'sequencing service' and ('provides_service_consumer_with' some 'DNA sequencing')
http://purl.obolibrary.org/obo/OBI_0000991
Edinburgh score
'Edinburgh score' SubClassOf 'is_specified_output_of' some 'Edinburgh handedness assay'
http://purl.obolibrary.org/obo/OBI_0000944
handedness assay
'handedness assay' EquivalentTo 'assay' and ('has_specified_output' some
('measurement datum' and ('is about' some 'handedness')))
'handedness assay' SubClassOf 'has_specified_output' some ('is about' some 'handedness')
'handedness assay' SubClassOf 'has_specified_output' some 'measurement datum'
http://purl.obolibrary.org/obo/OBI_0000957
self reported handedness assessment
'self reported handedness assessment' SubClassOf 'has_specified_output' some
('categorical measurement datum' and ('is quality measurement of' some 'handedness'))
'self reported handedness assessment' SubClassOf 'has_specified_output' some ('is about' some 'handedness')
'self reported handedness assessment' SubClassOf 'has_specified_output' some 'categorical measurement datum'
http://purl.obolibrary.org/obo/OBI_0000966
in live organism assay
'in live organism assay' EquivalentTo 'assay' and ('has participant' some ('located in' some
('organism' and ('has quality' some 'alive'))))
'in live organism assay' SubClassOf 'has participant' some
('material entity' and ('located in' some
('organism' and ('has quality' some 'alive'))))
http://purl.obolibrary.org/obo/OBI_0000913
promoter activity detection by reporter gene assay
'promoter activity detection by reporter gene assay' SubClassOf 'binding assay'
'promoter activity detection by reporter gene assay' SubClassOf 'assay'
http://purl.obolibrary.org/obo/OBI_0000911
real time reverse-transcription polymerase chain reaction assay
'real time reverse-transcription polymerase chain reaction assay' EquivalentTo 'assay' and ('has part' some
('real time polymerase chain reaction assay' and ('immediately preceded by' some 'artificially induced reverse transcription'))) and ('immediately preceded by' some 'artificially induced reverse transcription')
'real time reverse-transcription polymerase chain reaction assay' SubClassOf 'has_specified_output' some
('information content entity' and ('is about' some 'gene expression'))
'real time reverse-transcription polymerase chain reaction assay' SubClassOf 'has part' some 'real time polymerase chain reaction assay'
'real time reverse-transcription polymerase chain reaction assay' SubClassOf 'has_specified_output' some 'information content entity'
'real time reverse-transcription polymerase chain reaction assay' SubClassOf 'has part' some 'artificially induced reverse transcription'
'real time reverse-transcription polymerase chain reaction assay' SubClassOf 'has_specified_output' some ('is about' some 'gene expression')
http://purl.obolibrary.org/obo/OBI_0000910
radio immuno assay
'radio immuno assay' SubClassOf 'has part' some 'radioactivity detection'
http://purl.obolibrary.org/obo/OBI_0000185
imaging assay
'imaging assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
http://purl.obolibrary.org/obo/OBI_0001463
transcription profiling by array assay
'transcription profiling by array assay' SubClassOf 'realizes' some
('analyte role' and ('role of' some 'ribonucleic acid'))
'transcription profiling by array assay' SubClassOf 'has participant' some 'DNA microarray'
'transcription profiling by array assay' SubClassOf 'achieves_planned_objective' some 'transcription profiling identification objective'
'transcription profiling by array assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'gene expression'))
'transcription profiling by array assay' SubClassOf 'has_specified_input' some
('specimen' and ('has part' some 'ribonucleic acid'))
'transcription profiling by array assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA microarray'))) and ('has_specified_input' some 'DNA microarray')
http://purl.obolibrary.org/obo/OBI_0000163
radiolabel role
'radiolabel role' SubClassOf 'realized in' only 'radioactivity detection'
http://purl.obolibrary.org/obo/OBI_0001499
fluorescence detection binding assay
'fluorescence detection binding assay' EquivalentTo 'binding assay' and ('has part' some 'fluorescence detection assay')
'fluorescence detection binding assay' SubClassOf 'has part' some 'radioactivity detection'
http://purl.obolibrary.org/obo/OBI_0001491
radioactivity detection binding assay
'radioactivity detection binding assay' EquivalentTo 'binding assay' and ('has part' some 'radioactivity detection')
'radioactivity detection binding assay' SubClassOf 'has part' some 'radioactivity detection'
http://purl.obolibrary.org/obo/OBI_0001427
transcription profiling by tiling array design
'transcription profiling by tiling array design' SubClassOf 'transcription profiling design'
'transcription profiling by tiling array design' SubClassOf 'is concretized as' some ('realized in' some
(('has part' some 'transcription profiling by tiling array assay') and ('has participant' some 'tiling microarray')))
'transcription profiling by tiling array design' SubClassOf 'study design'
http://purl.obolibrary.org/obo/OBI_0001430
transcription profiling design
'transcription profiling design' EquivalentTo ('has part' some 'transcription profiling identification objective') and ('is concretized as' some ('realized in' some ('has part' some 'transcription profiling assay')))
http://purl.obolibrary.org/obo/OBI_0001435
DNA methylation profiling by high throughput sequencing design
'DNA methylation profiling by high throughput sequencing design' SubClassOf 'is concretized as' some ('realized in' some
(('has part' some 'DNA methylation profiling by high throughput sequencing assay') and ('has participant' some 'DNA sequencer')))
http://purl.obolibrary.org/obo/OBI_0001441
proteomic profiling by array design
'proteomic profiling by array design' SubClassOf 'is concretized as' some ('realized in' some
(('has part' some 'proteomic profiling by array assay') and ('has participant' some 'protein microarray')))
http://purl.obolibrary.org/obo/OBI_0001444
genotyping design
'genotyping design' SubClassOf 'is concretized as' some ('realized in' some ('has part' some 'genotyping assay'))
http://purl.obolibrary.org/obo/OBI_0000117
Bernoulli trial
'Bernoulli trial' SubClassOf 'achieves_planned_objective' some 'assay objective'
http://purl.obolibrary.org/obo/OBI_0001403
ChIP-chip design
'ChIP-chip design' SubClassOf 'is concretized as' some ('realized in' some
(('has part' some 'ChIP-chip assay') and ('has participant' some 'DNA microarray')))
http://purl.obolibrary.org/obo/OBI_0001410
translation profiling design
'translation profiling design' SubClassOf 'is concretized as' some ('realized in' some ('has part' some 'translation profiling assay'))
http://purl.obolibrary.org/obo/OBI_0001417
ChIP-chip by tiling array design
'ChIP-chip by tiling array design' SubClassOf 'is concretized as' some ('realized in' only
(('has part' some 'ChIP-chip by tiling array assay') and ('has participant' some 'tiling microarray')))
http://purl.obolibrary.org/obo/OBI_0001419
ChIP-chip by tiling array assay
'ChIP-chip by tiling array assay' SubClassOf 'has participant' some 'tiling microarray'
'ChIP-chip by tiling array assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'tiling microarray'))) and ('has_specified_input' some 'tiling microarray')
http://purl.obolibrary.org/obo/OBI_0000291
transcription factor binding site assay
'transcription factor binding site assay' SubClassOf 'has_specified_output' some
('measurement datum' and ('is about' some 'sequence-specific DNA binding'))
'transcription factor binding site assay' EquivalentTo 'assay' and ('has_specified_output' some
('information content entity' and ('is about' some 'transcription factor binding site')))
'transcription factor binding site assay' SubClassOf 'has_specified_output' some 'information content entity'
'transcription factor binding site assay' SubClassOf 'has_specified_output' some ('is about' some 'transcription factor binding site')
http://purl.obolibrary.org/obo/OBI_0002014
DNA methylation profiling by ChIP-chip assay
'DNA methylation profiling by ChIP-chip assay' SubClassOf 'has_specified_output' some
('information content entity' and ('is about' some 'DNA methylation'))
'DNA methylation profiling by ChIP-chip assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some ('has part' some http://purl.obolibrary.org/obo/GO_0000785)))) and ('has_specified_input' some
(('has part' some http://purl.obolibrary.org/obo/GO_0000785) and ('has role' some 'evaluant role')))
'DNA methylation profiling by ChIP-chip assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA microarray'))) and ('has_specified_input' some 'DNA microarray')
'DNA methylation profiling by ChIP-chip assay' SubClassOf 'has part' some 'chromatin immunoprecipitation'
'DNA methylation profiling by ChIP-chip assay' SubClassOf 'has part' some 'ChIP-chip assay'
http://purl.obolibrary.org/obo/OBI_0002015
transcription profiling by MPSS assay
'transcription profiling by MPSS assay' SubClassOf 'has_specified_output' some
('information content entity' and ('is about' some 'gene expression'))
'transcription profiling by MPSS assay' SubClassOf 'achieves_planned_objective' some 'transcription profiling identification objective'
'transcription profiling by MPSS assay' SubClassOf 'has participant' some 'assay bead'
'transcription profiling by MPSS assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'assay bead'))) and ('has_specified_input' some 'assay bead')
http://purl.obolibrary.org/obo/OBI_0002016
histone modification identification by ChIP-chip assay
'histone modification identification by ChIP-chip assay' SubClassOf 'has_specified_output' some
('information content entity' and ('is about' some 'histone modification'))
'histone modification identification by ChIP-chip assay' SubClassOf 'has_specified_output' some ('is about' some 'histone modification')
'histone modification identification by ChIP-chip assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some ('has part' some http://purl.obolibrary.org/obo/GO_0000785)))) and ('has_specified_input' some
(('has part' some http://purl.obolibrary.org/obo/GO_0000785) and ('has role' some 'evaluant role')))
'histone modification identification by ChIP-chip assay' SubClassOf 'has_specified_output' some 'information content entity'
'histone modification identification by ChIP-chip assay' SubClassOf 'has part' some 'ChIP-chip assay'
'histone modification identification by ChIP-chip assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA microarray'))) and ('has_specified_input' some 'DNA microarray')
'histone modification identification by ChIP-chip assay' SubClassOf 'has part' some 'chromatin immunoprecipitation'
http://purl.obolibrary.org/obo/OBI_0002017
histone modification identification by ChIP-Seq assay
'histone modification identification by ChIP-Seq assay' SubClassOf 'has_specified_output' some
('information content entity' and ('is about' some 'histone modification'))
'histone modification identification by ChIP-Seq assay' SubClassOf 'epigenetic modification assay'
'histone modification identification by ChIP-Seq assay' SubClassOf 'has_specified_output' some ('is about' some 'histone modification')
'histone modification identification by ChIP-Seq assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some ('has part' some http://purl.obolibrary.org/obo/GO_0000785)))) and ('has_specified_input' some
(('has part' some http://purl.obolibrary.org/obo/GO_0000785) and ('has role' some 'evaluant role')))
'histone modification identification by ChIP-Seq assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
'histone modification identification by ChIP-Seq assay' SubClassOf 'has_specified_output' some 'DNA sequence data'
'histone modification identification by ChIP-Seq assay' SubClassOf 'has part' some 'ChIP-seq assay'
'histone modification identification by ChIP-Seq assay' SubClassOf 'has part' some 'chromatin immunoprecipitation'
http://purl.obolibrary.org/obo/OBI_0002018
transcription factor binding site identification by ChIP-chip assay
'transcription factor binding site identification by ChIP-chip assay' SubClassOf 'has_specified_output' some
('information content entity' and ('is about' some 'transcription factor binding site'))
'transcription factor binding site identification by ChIP-chip assay' SubClassOf 'has part' some 'ChIP-chip assay'
'transcription factor binding site identification by ChIP-chip assay' SubClassOf 'has_specified_output' some 'information content entity'
'transcription factor binding site identification by ChIP-chip assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some ('has part' some http://purl.obolibrary.org/obo/GO_0000785)))) and ('has_specified_input' some
(('has part' some http://purl.obolibrary.org/obo/GO_0000785) and ('has role' some 'evaluant role')))
'transcription factor binding site identification by ChIP-chip assay' SubClassOf 'has_specified_output' some ('is about' some 'transcription factor binding site')
'transcription factor binding site identification by ChIP-chip assay' SubClassOf 'has part' some 'chromatin immunoprecipitation'
'transcription factor binding site identification by ChIP-chip assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA microarray'))) and ('has_specified_input' some 'DNA microarray')
http://purl.obolibrary.org/obo/OBI_0002019
transcription factor binding site identification by ChIP-Seq assay
'transcription factor binding site identification by ChIP-Seq assay' SubClassOf 'has_specified_output' some
('information content entity' and ('is about' some 'transcription factor binding site'))
'transcription factor binding site identification by ChIP-Seq assay' SubClassOf 'has part' some 'chromatin immunoprecipitation'
'transcription factor binding site identification by ChIP-Seq assay' SubClassOf 'has_specified_output' some 'DNA sequence data'
'transcription factor binding site identification by ChIP-Seq assay' SubClassOf 'has_specified_output' some ('is about' some 'transcription factor binding site')
'transcription factor binding site identification by ChIP-Seq assay' SubClassOf 'has part' some 'ChIP-seq assay'
'transcription factor binding site identification by ChIP-Seq assay' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
'transcription factor binding site identification by ChIP-Seq assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some ('has part' some http://purl.obolibrary.org/obo/GO_0000785)))) and ('has_specified_input' some
(('has part' some http://purl.obolibrary.org/obo/GO_0000785) and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0002029
serial analysis of gene expression
'serial analysis of gene expression' SubClassOf 'has participant' some 'DNA sequencer'
'serial analysis of gene expression' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
http://purl.obolibrary.org/obo/OBI_1110124
assay measuring qualitiative binding of a T cell epitope:MHC:TCR complex
'assay measuring qualitiative binding of a T cell epitope:MHC:TCR complex' SubClassOf 'binding assay'
http://purl.obolibrary.org/obo/OBI_0001586
purified MHC direct binding assay measuring half life of a MHC:ligand complex using radioactivity detection
'purified MHC direct binding assay measuring half life of a MHC:ligand complex using radioactivity detection' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0302737
PCR-SSCP assay
'PCR-SSCP assay' SubClassOf 'has_specified_output' some 'genotype information'
'PCR-SSCP assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'PCR-SSCP assay' SubClassOf 'has_specified_output' some 'image'
'PCR-SSCP assay' SubClassOf 'has participant' some 'polyacrylamide gel'
'PCR-SSCP assay' SubClassOf 'has_specified_output' some
('image' and 'genotype information')
http://purl.obolibrary.org/obo/OBI_0302736
comet assay
'comet assay' SubClassOf 'assay'
'comet assay' SubClassOf 'achieves_planned_objective' some 'assay objective'
'comet assay' SubClassOf 'has_specified_input' some 'cell'
'comet assay' SubClassOf 'has participant' some 'power supply'
'comet assay' SubClassOf 'has participant' some 'gel tank'
'comet assay' SubClassOf 'has_specified_output' some
('information content entity' and ('is about' some 'cellular response to DNA damage stimulus'))
'comet assay' SubClassOf 'has part' some 'fluorescence microscopy'
'comet assay' SubClassOf ('realizes' some
('function' and ('inheres in' some
('gel tank' and 'power supply' and 'microscope')))) and ('has_specified_input' some
('gel tank' and 'power supply' and 'microscope'))
'comet assay' SubClassOf 'cytometry assay'
'comet assay' SubClassOf ('realizes' some
('reagent role' and ('inheres in' some
('material entity' and ('has role' some 'dye role') and ('has disposition' some 'fluorescence'))))) and ('has_specified_input' some
('material entity' and ('has role' some 'dye role') and ('has disposition' some 'fluorescence')))
'comet assay' SubClassOf 'has_specified_output' some 'information content entity'
'comet assay' SubClassOf 'has_specified_output' some ('is about' some 'cellular response to DNA damage stimulus')
'comet assay' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'cell'))) and ('has_specified_input' some
('cell' and ('has role' some 'evaluant role')))
http://purl.obolibrary.org/obo/OBI_0001599
cell bound MHC competitive binding assay of a MHC:ligand complex using radioactivity detection
'cell bound MHC competitive binding assay of a MHC:ligand complex using radioactivity detection' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001590
purified MHC direct binding assay measuring binding of a MHC:ligand complex using fluorescence detection
'purified MHC direct binding assay measuring binding of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001592
purified MHC direct binding assay measuring half maximal effective concentration [EC50] of a MHC:ligand complex using fluorescence detection
'purified MHC direct binding assay measuring half maximal effective concentration [EC50] of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001594
cell bound MHC competitive binding assay of a MHC:ligand complex using fluorescence detection
'cell bound MHC competitive binding assay of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0000275
analyte role
'analyte role' SubClassOf 'realized in' only 'analyte assay'
http://purl.obolibrary.org/obo/OBI_0001541
purified MHC direct binding assay measuring binding on rate [kon] of a MHC:ligand complex using fluorescence detection
'purified MHC direct binding assay measuring binding on rate [kon] of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001543
purified MHC direct binding assay measuring equilibrium dissociation constant [KD] of a MHC:ligand complex approximated by EC50 using fluorescence detection
'purified MHC direct binding assay measuring equilibrium dissociation constant [KD] of a MHC:ligand complex approximated by EC50 using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001544
cell lysate MHC competitive binding assay measuring equilibrium dissociation constant [KD] of a MHC:ligand complex using radioactivity detection
'cell lysate MHC competitive binding assay measuring equilibrium dissociation constant [KD] of a MHC:ligand complex using radioactivity detection' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001549
cell bound MHC competitive binding assay measuring equilibrium dissociation constant [KD] of a MHC:ligand complex using radioactivity detection
'cell bound MHC competitive binding assay measuring equilibrium dissociation constant [KD] of a MHC:ligand complex using radioactivity detection' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001553
assay measuring a binding constant of a MHC:ligand complex
'assay measuring a binding constant of a MHC:ligand complex' SubClassOf 'binding constant determination assay'
http://purl.obolibrary.org/obo/OBI_0001556
cell lysate MHC direct binding assay of a MHC:ligand complex using radioactivity detection
'cell lysate MHC direct binding assay of a MHC:ligand complex using radioactivity detection' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001558
cell bound MHC direct binding assay measuring half life of a MHC:ligand complex using radioactivity detection
'cell bound MHC direct binding assay measuring half life of a MHC:ligand complex using radioactivity detection' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001559
cell bound MHC direct binding assay measuring half life of a MHC:ligand complex using fluorescence detection
'cell bound MHC direct binding assay measuring half life of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001565
cell lysate MHC direct binding assay measuring half life of a MHC:ligand complex using radioactivity detection
'cell lysate MHC direct binding assay measuring half life of a MHC:ligand complex using radioactivity detection' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001567
cell lysate MHC direct binding assay measuring binding off rate [koff] of a MHC:ligand complex using radioactivity detection
'cell lysate MHC direct binding assay measuring binding off rate [koff] of a MHC:ligand complex using radioactivity detection' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001568
purified MHC competitive binding assay measuring half maximal inhibitory concentration [IC50] of a MHC:ligand complex using radioactivity detection
'purified MHC competitive binding assay measuring half maximal inhibitory concentration [IC50] of a MHC:ligand complex using radioactivity detection' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001569
purified MHC direct binding assay measuring binding off rate [koff] of a MHC:ligand complex using fluorescence detection
'purified MHC direct binding assay measuring binding off rate [koff] of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001561
cell bound MHC direct binding assay measuring half maximal effective concentration [EC50] of a MHC:ligand complex using fluorescence detection
'cell bound MHC direct binding assay measuring half maximal effective concentration [EC50] of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001501
fluorescence detection assay
'fluorescence detection assay' EquivalentTo 'assay' and (('realizes' some 'fluorescence') and ('has_specified_input' some 'material entity')) and ('has_specified_output' some ('is about' some 'fluorescence'))
'fluorescence detection assay' EquivalentTo 'assay' and ('has_specified_input' some
('material entity' and ('bearer of' some 'fluorescence'))) and ('has_specified_output' some
('material entity' and ('bearer of' some 'fluorescence')))
http://purl.obolibrary.org/obo/OBI_0001513
purified MHC competitive binding assay of a MHC:ligand complex using radioactivity detection
'purified MHC competitive binding assay of a MHC:ligand complex using radioactivity detection' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001516
cell lysate MHC direct binding assay measuring half maximal effective concentration [EC50] of a MHC:ligand complex using radioactivity detection
'cell lysate MHC direct binding assay measuring half maximal effective concentration [EC50] of a MHC:ligand complex using radioactivity detection' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001517
cell bound MHC competitive binding assay measuring half maximal inhibitory concentration [IC50] of a MHC:ligand complex using radioactivity detection
'cell bound MHC competitive binding assay measuring half maximal inhibitory concentration [IC50] of a MHC:ligand complex using radioactivity detection' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001519
cell lysate MHC direct binding assay of a MHC:ligand complex using fluorescence detection
'cell lysate MHC direct binding assay of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001520
cell bound MHC competitive binding assay measuring half maximal inhibitory concentration [IC50] of a MHC:ligand complex using fluorescence detection
'cell bound MHC competitive binding assay measuring half maximal inhibitory concentration [IC50] of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001524
cell bound MHC direct binding assay measuring equilibrium association constant [KA] of a MHC:ligand complex using fluorescence detection
'cell bound MHC direct binding assay measuring equilibrium association constant [KA] of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001531
purified MHC direct binding assay measuring half life of a MHC:ligand complex using fluorescence detection
'purified MHC direct binding assay measuring half life of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001534
purified MHC competitive binding assay measuring binding of a MHC:ligand complex using fluorescence detection
'purified MHC competitive binding assay measuring binding of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0000201
radioactivity detection
'radioactivity detection' EquivalentTo 'assay' and ('has_specified_input' some
('material entity' and ('bearer of' some 'radioactive'))) and ('has_specified_output' some ('is about' some ('realizes' some 'radioactive')))
'radioactivity detection' EquivalentTo 'assay' and ('has_specified_input' some
('material entity' and ('bearer of' some 'radioactive'))) and ('has_specified_output' some ('is about' some
('material entity' and ('bearer of' some 'radioactive'))))
http://purl.obolibrary.org/obo/OBI_0001537
purified MHC competitive binding assay measuring equilibrium dissociation constant [KD] of a MHC:ligand complex using fluorescence detection
'purified MHC competitive binding assay measuring equilibrium dissociation constant [KD] of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001539
cell bound MHC competitive binding assay measuring equilibrium dissociation constant [KD] of a MHC:ligand complex using fluorescence detection
'cell bound MHC competitive binding assay measuring equilibrium dissociation constant [KD] of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001602
cell bound MHC direct binding assay of a MHC:ligand complex using radioactivity detection
'cell bound MHC direct binding assay of a MHC:ligand complex using radioactivity detection' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001604
purified MHC direct binding assay measuring 50% dissociation of binding temperature [Tm] of a MHC:ligand complex using fluorescence detection
'purified MHC direct binding assay measuring 50% dissociation of binding temperature [Tm] of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001606
cell bound MHC direct binding assay of a MHC:ligand complex using fluorescence detection
'cell bound MHC direct binding assay of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001608
purified MHC direct binding assay of a MHC:ligand complex using radioactivity detection
'purified MHC direct binding assay of a MHC:ligand complex using radioactivity detection' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001613
purified MHC competitive binding assay measuring half maximal inhibitory concentration [IC50] of a MHC:ligand complex using fluorescence detection
'purified MHC competitive binding assay measuring half maximal inhibitory concentration [IC50] of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0002075
MHC ligand assay
'MHC ligand assay' SubClassOf 'binding assay'
http://purl.obolibrary.org/obo/OBI_0002030
genotyping by tiling array
'genotyping by tiling array' SubClassOf 'has participant' some 'tiling microarray'
'genotyping by tiling array' SubClassOf ('realizes' some
('function' and ('inheres in' some 'tiling microarray'))) and ('has_specified_input' some 'tiling microarray')
http://purl.obolibrary.org/obo/OBI_0002031
genotyping by SNP array
'genotyping by SNP array' SubClassOf 'has participant' some 'SNP microarray'
'genotyping by SNP array' SubClassOf ('realizes' some
('function' and ('inheres in' some 'SNP microarray'))) and ('has_specified_input' some 'SNP microarray')
http://purl.obolibrary.org/obo/OBI_0002032
parallel analysis of RNA structure
'parallel analysis of RNA structure' SubClassOf ('realizes' some
('evaluant role' and ('role of' some 'RNA extract'))) and ('has_specified_input' some
('RNA extract' and ('has role' some 'evaluant role')))
'parallel analysis of RNA structure' SubClassOf ('realizes' some
('reagent role' and ('inheres in' some 'enzyme'))) and ('has_specified_input' some 'enzyme')
http://purl.obolibrary.org/obo/OBI_0002040
chromatin isolation by RNA purification sequencing assay
'chromatin isolation by RNA purification sequencing assay' SubClassOf 'has part' some 'DNA sequencing'
http://purl.obolibrary.org/obo/OBI_0002059
assay measuring a binding constant of a T cell epitope:MHC:TCR complex
'assay measuring a binding constant of a T cell epitope:MHC:TCR complex' SubClassOf 'binding constant determination assay'
http://purl.obolibrary.org/obo/OBI_0001665
cell bound MHC direct binding assay measuring the off rate [koff] of a MHC:ligand complex using fluorescence detection
'cell bound MHC direct binding assay measuring the off rate [koff] of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001666
cell bound MHC direct binding assay measuring binding on rate [kon] of a MHC:ligand complex using fluorescence detection
'cell bound MHC direct binding assay measuring binding on rate [kon] of a MHC:ligand complex using fluorescence detection' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001668
split-ubiquitin assay
'split-ubiquitin assay ' SubClassOf ('assay' and ('has_specified_input' some 'genetically modified material') and ('has_specified_output' some
('data item' and ('is about' some 'protein domain specific binding')))) and ('achieves_planned_objective' some 'protein and DNA interaction identification objective')
'split-ubiquitin assay ' SubClassOf 'achieves_planned_objective' some 'protein and DNA interaction identification objective'
'split-ubiquitin assay ' SubClassOf 'has_specified_input' some 'genetically modified material'
'split-ubiquitin assay ' SubClassOf 'has_specified_output' some ('is about' some 'protein domain specific binding')
'split-ubiquitin assay ' SubClassOf 'has_specified_output' some 'data item'
http://purl.obolibrary.org/obo/OBI_0001669
far-Western blot
'far-Western blot' EquivalentTo ('assay' and ('has_specified_input' some 'protein complex') and ('has_specified_output' some
('data item' and ('is about' some 'protein domain specific binding')))) and ('achieves_planned_objective' some 'assay objective')
'far-Western blot' SubClassOf 'has_specified_output' some 'data item'
'far-Western blot' SubClassOf 'has_specified_output' some ('is about' some 'protein domain specific binding')
'far-Western blot' SubClassOf 'has_specified_input' some 'protein complex'
http://purl.obolibrary.org/obo/OBI_0001672
gene knock-down assay
'gene knock-down assay' SubClassOf ('assay' and ('has_specified_input' some 'cultured cell population') and ('has_specified_output' some
('data item' and ('is about' some 'GO:molecular_function')))) and ('achieves_planned_objective' some 'assay objective')
'gene knock-down assay' SubClassOf 'has_specified_input' some 'cultured cell population'
'gene knock-down assay' SubClassOf 'has part' some 'transfection'
'gene knock-down assay' SubClassOf 'has_specified_output' some ('is about' some
('GO:molecular_function' or 'biological_process'))
http://purl.obolibrary.org/obo/OBI_0001673
nano-cap analysis of gene expression
'nano-cap analysis of gene expression ' SubClassOf ('assay' and ('has_specified_input' some 'RNA extract') and ('has_specified_output' some
('data item' and ('is about' some 'gene expression')))) and ('achieves_planned_objective' some 'transcription profiling identification objective')
'nano-cap analysis of gene expression ' SubClassOf 'has_specified_input' some 'RNA extract'
'nano-cap analysis of gene expression ' SubClassOf 'has_specified_output' some 'data item'
'nano-cap analysis of gene expression ' SubClassOf 'has_specified_output' some ('is about' some 'gene expression')
'nano-cap analysis of gene expression ' SubClassOf 'achieves_planned_objective' some 'transcription profiling identification objective'
http://purl.obolibrary.org/obo/OBI_0001674
cap analysis of gene expression
'cap analysis of gene expression ' SubClassOf 'has_specified_output' some
('sequence data' and ('is about' some 'gene expression'))
'cap analysis of gene expression ' SubClassOf 'has part' some 'DNA sequencing'
'cap analysis of gene expression ' SubClassOf 'has participant' some 'DNA sequencer'
'cap analysis of gene expression ' SubClassOf ('realizes' some
('function' and ('inheres in' some 'DNA sequencer'))) and ('has_specified_input' some 'DNA sequencer')
'cap analysis of gene expression ' SubClassOf 'has_specified_output' some ('is about' some 'gene expression')
'cap analysis of gene expression ' SubClassOf 'has_specified_output' some 'sequence data'
http://purl.obolibrary.org/obo/OBI_0001679
yeast 2-hybrid
'yeast 2-hybrid ' SubClassOf ('assay' and ('has_specified_input' some 'genetically modified material') and ('has_specified_output' some
('data item' and ('is about' some 'protein domain specific binding')))) and ('achieves_planned_objective' some 'protein and DNA interaction identification objective')
'yeast 2-hybrid ' SubClassOf 'has_specified_input' some 'genetically modified material'
'yeast 2-hybrid ' SubClassOf 'has_specified_output' some 'data item'
'yeast 2-hybrid ' SubClassOf 'achieves_planned_objective' some 'protein and DNA interaction identification objective'
'yeast 2-hybrid ' SubClassOf 'has_specified_output' some ('is about' some 'protein domain specific binding')
http://purl.obolibrary.org/obo/OBI_0001670
RNA protection assay
'RNA protection assay' SubClassOf ('assay' and ('has_specified_input' some 'RNA extract') and ('has_specified_output' some
('data item' and ('is about' some 'gene expression')))) and ('achieves_planned_objective' some 'assay objective')
'RNA protection assay' SubClassOf 'has_specified_input' some 'RNA extract'
'RNA protection assay' SubClassOf 'has_specified_output' some 'data item'
'RNA protection assay' SubClassOf 'has_specified_output' some ('is about' some 'gene expression')
http://purl.obolibrary.org/obo/OBI_0001671
electrophoretic mobility shift assay
'electrophoretic mobility shift assay ' EquivalentTo ('assay' and ('has_specified_input' some 'RNA extract') and ('has_specified_output' some
('data item' and ('is about' some 'sequence-specific DNA binding')))) and ('achieves_planned_objective' some 'assay objective')
'electrophoretic mobility shift assay ' SubClassOf 'has_specified_input' some 'RNA extract'
'electrophoretic mobility shift assay ' SubClassOf 'has_specified_output' some ('is about' some 'sequence-specific DNA binding')
'electrophoretic mobility shift assay ' SubClassOf 'has_specified_output' some 'data item'
http://purl.obolibrary.org/obo/OBI_0001683
chromosome organization assay by fluorescence in situ hybridization
'chromosome organization assay by fluorescence in situ hybridization' EquivalentTo ('in situ hybridization' and ('has_specified_input' some 'binding constant') and ('has_specified_output' some
('data item' and ('is about' some 'chromosome organization')))) and ('achieves_planned_objective' some 'biological feature identification objective')
'chromosome organization assay by fluorescence in situ hybridization' SubClassOf ('realizes' some
('evaluant role' and ('role of' some ('has part' some 'chromosome')))) and ('has_specified_input' some
(('has part' some 'chromosome') and ('has role' some 'evaluant role')))
'chromosome organization assay by fluorescence in situ hybridization' SubClassOf 'has_specified_output' some ('is about' some 'chromosome organization')
'chromosome organization assay by fluorescence in situ hybridization' SubClassOf 'achieves_planned_objective' some 'biological feature identification objective'
'chromosome organization assay by fluorescence in situ hybridization' SubClassOf 'has_specified_input' some 'molecular label'
'chromosome organization assay by fluorescence in situ hybridization' SubClassOf 'has_specified_output' some 'data item'
http://purl.obolibrary.org/obo/OBI_0001684
methylation-specific polymerase chain reaction
'methylation-specific polymerase chain reaction ' SubClassOf 'has_specified_output' some ('is about' some 'regulation of DNA methylation')
'methylation-specific polymerase chain reaction ' SubClassOf 'has_specified_output' some 'data item'
http://purl.obolibrary.org/obo/OBI_0001685
amplification of intermethylated sites (AIMS) assay
'amplification of intermethylated sites (AIMS) assay ' EquivalentTo ('assay' and ('has_specified_input' some 'high molecular weight DNA extract') and ('has_specified_output' some
('data item' and ('is about' some 'regulation of DNA methylation')))) and ('achieves_planned_objective' some 'epigenetic modification identification objective')
'amplification of intermethylated sites (AIMS) assay ' SubClassOf 'achieves_planned_objective' some 'epigenetic modification identification objective'
'amplification of intermethylated sites (AIMS) assay ' SubClassOf 'has_specified_input' some 'high molecular weight DNA extract'
'amplification of intermethylated sites (AIMS) assay ' SubClassOf 'has_specified_output' some 'data item'
'amplification of intermethylated sites (AIMS) assay ' SubClassOf 'has_specified_output' some ('is about' some 'regulation of DNA methylation')
http://purl.obolibrary.org/obo/OBI_0001686
in situ hybridization
'in situ hybridization' EquivalentTo ('assay' and ('has_specified_input' some 'labeled nucleic acid extract') and ('has_specified_output' some
('data item' and ('is about' some 'macromolecule localization')))) and ('achieves_planned_objective' some 'biological feature identification objective')
'in situ hybridization' SubClassOf 'has_specified_output' some 'data item'
'in situ hybridization' SubClassOf 'has_specified_input' some 'labeled nucleic acid extract'
'in situ hybridization' SubClassOf 'has_specified_output' some ('is about' some 'macromolecule localization')
'in situ hybridization' SubClassOf 'achieves_planned_objective' some 'biological feature identification objective'
'in situ hybridization' SubClassOf 'has part' some 'nucleic acid hybridization'
http://purl.obolibrary.org/obo/OBI_0001689
cytochalasin-induced inhibition of actin polymerization assay
'cytochalasin-induced inhibition of actin polymerization assay' EquivalentTo ('assay' and ('has_specified_input' some 'cytochalasin') and ('has_specified_output' some
('data item' and ('is about' some 'actin filament polymerization')))) and ('achieves_planned_objective' some 'biological feature identification objective')
'cytochalasin-induced inhibition of actin polymerization assay' SubClassOf 'has_specified_output' some ('is about' some 'actin filament polymerization')
'cytochalasin-induced inhibition of actin polymerization assay' SubClassOf 'achieves_planned_objective' some 'biological feature identification objective'
'cytochalasin-induced inhibition of actin polymerization assay' SubClassOf 'has_specified_output' some 'data item'
'cytochalasin-induced inhibition of actin polymerization assay' SubClassOf 'has_specified_input' some 'cytochalasin'
http://purl.obolibrary.org/obo/OBI_0001680
Sos-recruitment assay
'Sos-recruitment assay ' SubClassOf ('assay' and ('has_specified_input' some 'genetically modified material') and ('has_specified_output' some
('data item' and ('is about' some 'protein domain specific binding')))) and ('achieves_planned_objective' some 'protein and DNA interaction identification objective')
'Sos-recruitment assay ' SubClassOf 'has_specified_input' some 'genetically modified material'
'Sos-recruitment assay ' SubClassOf 'achieves_planned_objective' some 'protein and DNA interaction identification objective'
'Sos-recruitment assay ' SubClassOf 'has_specified_output' some 'data item'
'Sos-recruitment assay ' SubClassOf 'has_specified_output' some ('is about' some 'protein domain specific binding')
http://purl.obolibrary.org/obo/OBI_0001681
yeast one-hybrid
'yeast one-hybrid ' EquivalentTo ('assay' and ('has_specified_input' some 'genetically modified material') and ('has_specified_output' some
('data item' and ('is about' some 'sequence-specific DNA binding')))) and ('achieves_planned_objective' some 'assay objective')
'yeast one-hybrid ' SubClassOf 'has_specified_output' some 'data item'
'yeast one-hybrid ' SubClassOf 'has_specified_output' some ('is about' some 'sequence-specific DNA binding')
'yeast one-hybrid ' SubClassOf 'has_specified_input' some 'genetically modified material'
http://purl.obolibrary.org/obo/OBI_0001682
bacterial one-hybrid
'bacterial one-hybrid ' EquivalentTo ('assay' and ('has_specified_input' some 'genetically modified material') and ('has_specified_output' some
('data item' and ('is about' some 'sequence-specific DNA binding')))) and ('achieves_planned_objective' some 'protein and DNA interaction identification objective')
'bacterial one-hybrid ' SubClassOf 'has_specified_output' some ('is about' some 'sequence-specific DNA binding')
'bacterial one-hybrid ' SubClassOf 'has_specified_output' some 'data item'
'bacterial one-hybrid ' SubClassOf 'achieves_planned_objective' some 'protein and DNA interaction identification objective'
'bacterial one-hybrid ' SubClassOf 'has_specified_input' some 'genetically modified material'
http://purl.obolibrary.org/obo/OBI_0000366
metabolite profiling
'metabolite profiling' SubClassOf 'has_specified_output' some 'measurement datum'
'metabolite profiling' SubClassOf 'achieves_planned_objective' some 'assay objective'
http://purl.obolibrary.org/obo/OBI_0001624
organism identification assay
'organism identification assay' EquivalentTo 'assay' and ('achieves_planned_objective' some 'organism identification objective')
'organism identification assay' SubClassOf ('has_specified_input' some
('specimen' and ('has part' some 'organism'))) and ('has_specified_output' some
('information content entity' and ('is about' some 'organism')))
'organism identification assay' SubClassOf 'achieves_planned_objective' some 'organism identification objective'
'organism identification assay' SubClassOf 'has_specified_input' some
('specimen' and ('has part' some 'organism'))
'organism identification assay' SubClassOf 'has_specified_output' some ('is about' some 'organism')
http://purl.obolibrary.org/obo/OBI_0001649
RIA measuring binding of a B cell epitope:antibody complex
'RIA measuring binding of a B cell epitope:antibody complex' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001659
flow cytometry assay measuring binding of a B cell epitope:antibody complex
'flow cytometry assay measuring binding of a B cell epitope:antibody complex' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001703
assay measuring qualitiative binding of a B cell epitope:antibody complex
'assay measuring qualitiative binding of a B cell epitope:antibody complex' SubClassOf 'binding assay'
http://purl.obolibrary.org/obo/OBI_0001709
assay measuring a binding constant of a B cell epitope:antibody complex
'assay measuring a binding constant of a B cell epitope:antibody complex' SubClassOf 'binding constant determination assay'
http://purl.obolibrary.org/obo/OBI_0001726
quenching assay measuring binding of a B cell epitope:antibody complex
'quenching assay measuring binding of a B cell epitope:antibody complex' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001727
RIA measuring the dissociation constant [KD] of a B cell epitope:antibody complex
'RIA measuring the dissociation constant [KD] of a B cell epitope:antibody complex' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001729
quenching assay measuring the dissociation constant [KD] of a B cell epitope:antibody complex
'quenching assay measuring the dissociation constant [KD] of a B cell epitope:antibody complex' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001732
quenching assay measuring the association constant [KA] of a B cell epitope:antibody complex
'quenching assay measuring the association constant [KA] of a B cell epitope:antibody complex' SubClassOf 'fluorescence detection binding assay'
http://purl.obolibrary.org/obo/OBI_0001736
RIA measuring the association constant [KA] of a B cell epitope:antibody complex
'RIA measuring the association constant [KA] of a B cell epitope:antibody complex' SubClassOf 'radioactivity detection binding assay'
http://purl.obolibrary.org/obo/OBI_0002565
adapter-sequence trimming
'adapter-sequence trimming' SubClassOf 'has_specified_input' some
('sequence data' and 'adapter sequence data')
'adapter-sequence trimming' SubClassOf 'has_specified_output' some 'adapter-trimmed sequence data'
'adapter-sequence trimming' SubClassOf 'sequence trimming'
http://purl.obolibrary.org/obo/OBI_0002566
file merge
'file merge' SubClassOf 'has_specified_input' some 'sequence data'
'file merge' SubClassOf 'data transformation'
http://purl.obolibrary.org/obo/OBI_0002567
sequence alignment
'sequence alignment' SubClassOf 'sequence analysis data transformation'
'sequence alignment' SubClassOf 'has_specified_input' some 'sequence data'
'sequence alignment' SubClassOf 'has_specified_output' some 'aligned sequence data'
http://purl.obolibrary.org/obo/OBI_0002568
sequence data feature count tabulation
'sequence data feature count tabulation' SubClassOf 'has_specified_output' some 'sequence library feature count data'
'sequence data feature count tabulation' SubClassOf 'has_specified_input' some 'aligned sequence data'
'sequence data feature count tabulation' SubClassOf 'sequence analysis data transformation'
http://purl.obolibrary.org/obo/OBI_0002569
trimmed sequence data
'trimmed sequence data' SubClassOf 'sequence data'
'trimmed sequence data' EquivalentTo 'sequence data' and ('is_specified_output_of' some 'sequence trimming')
http://purl.obolibrary.org/obo/OBI_0002578
adapter sequence data
'adapter sequence data' SubClassOf 'sequence data'
http://purl.obolibrary.org/obo/OBI_0002579
adapter-trimmed sequence data
'adapter-trimmed sequence data' SubClassOf 'sequence data'
http://purl.obolibrary.org/obo/OBI_0002585
sequence trimming
'sequence trimming' SubClassOf 'data transformation'
http://purl.obolibrary.org/obo/OBI_0002586
digital acquisition card
'digital acquisition card' SubClassOf 'device'
'digital acquisition card' SubClassOf 'has function' some 'signal conversion function'
http://purl.obolibrary.org/obo/OBI_0002587
machine learning
'machine learning' SubClassOf 'planned process'
http://purl.obolibrary.org/obo/OBI_0002588
supervised machine learning
'supervised machine learning' SubClassOf 'machine learning'
http://purl.obolibrary.org/obo/OBI_0002589
unsupervised machine learning
'unsupervised machine learning' SubClassOf 'machine learning'
http://purl.obolibrary.org/obo/OBI_0002580
aligned sequence data
'aligned sequence data' SubClassOf 'sequence data'
http://purl.obolibrary.org/obo/OBI_0002581
merged aligned sequence data
'merged aligned sequence data' SubClassOf 'is_specified_output_of' some 'file merge'
'merged aligned sequence data' SubClassOf 'sequence data'
http://purl.obolibrary.org/obo/OBI_0002582
sequence library feature count data
'sequence library feature count data' SubClassOf 'data set'
http://purl.obolibrary.org/obo/OBI_0002583
DNA methylation profiling data
'DNA methylation profiling data' SubClassOf 'sequence data'
'DNA methylation profiling data' SubClassOf 'is_specified_output_of' some 'DNA methylation profiling assay'
http://purl.obolibrary.org/obo/OBI_0002584
differential expression analysis data
'differential expression analysis data' SubClassOf 'data set'
http://purl.obolibrary.org/obo/GO_0000785
chromatin
'chromatin' SubClassOf 'cellular_component'