@ Ontology Change Report @ First ontology URI: http://purl.org/obo/owl/omit @ Second ontology URI: file:///srv/ncbo/share/env/prod/repository/OMIT/14/RackMultipart20131103-5663-o6odyn @ File Written at 2013.12.09 at 12:12:45 PST @ Number of classes changed: 2349 @ Number of classes added: 2338 @Classes modified from previous --- Class Changed: http://purl.org/obo/owl/omit#GO_1900097 label: positive regulation of dosage compensation by inactivation of X chromosome - SubClassOf('positive regulation of dosage compensation by inactivation of X chromosome' ObjectSomeValueFrom('positively_regulates' 'dosage compensation by inactivation of X chromosome')) - EquivalentClasses('positive regulation of dosage compensation by inactivation of X chromosome' ObjectSomeValueFrom('positively_regulates' 'dosage compensation by inactivation of X chromosome') ) - SubClassOf('positive regulation of dosage compensation by inactivation of X chromosome' 'regulation of dosage compensation by inactivation of X chromosome') --- Class Changed: http://purl.org/obo/owl/omit#SO_1000002 label: substitution - SubClassOf('substitution' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044543 label: envenomation resulting in zymogen activation in other organism - SubClassOf('envenomation resulting in zymogen activation in other organism' ObjectSomeValueFrom('has_part' 'zymogen activation in other organism')) - SubClassOf('envenomation resulting in zymogen activation in other organism' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001204 label: Phage_RNA_Polymerase_Promoter - SubClassOf('Phage_RNA_Polymerase_Promoter' 'RNA_polymerase_promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001015 label: snoRNA transcription from an RNA polymerase II promoter - SubClassOf('snoRNA transcription from an RNA polymerase II promoter' 'snoRNA transcription') - SubClassOf('snoRNA transcription from an RNA polymerase II promoter' 'transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032591 label: dendritic spine membrane - SubClassOf('dendritic spine membrane' 'neuron projection membrane') - SubClassOf('dendritic spine membrane' ObjectSomeValueFrom('part_of' 'dendritic spine')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0009019 label: tRNA (guanine-N1-)-methyltransferase activity - SubClassOf('tRNA (guanine-N1-)-methyltransferase activity' 'tRNA (guanine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060213 label: positive regulation of nuclear-transcribed mRNA poly(A) tail shortening - SubClassOf('positive regulation of nuclear-transcribed mRNA poly(A) tail shortening' ObjectSomeValueFrom('positively_regulates' 'nuclear-transcribed mRNA poly(A) tail shortening')) - SubClassOf('positive regulation of nuclear-transcribed mRNA poly(A) tail shortening' 'regulation of nuclear-transcribed mRNA poly(A) tail shortening') - SubClassOf('positive regulation of nuclear-transcribed mRNA poly(A) tail shortening' 'positive regulation of mRNA 3'-end processing') - EquivalentClasses('positive regulation of nuclear-transcribed mRNA poly(A) tail shortening' ObjectSomeValueFrom('positively_regulates' 'nuclear-transcribed mRNA poly(A) tail shortening') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001214 label: metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in negative regulation of transcription - SubClassOf('metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in negative regulation of transcription' 'RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription') - SubClassOf('metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in negative regulation of transcription' 'metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000100 label: endogenous_retroviral_gene - SubClassOf('endogenous_retroviral_gene' 'proviral_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001195 label: maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase III promoter - SubClassOf('maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase III promoter' 'maintenance of transcriptional fidelity during DNA-dependent transcription elongation') - SubClassOf('maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase III promoter' ObjectSomeValueFrom('part_of' 'transcription elongation from RNA polymerase III promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001971 label: negative regulation of activation of membrane attack complex - SubClassOf('negative regulation of activation of membrane attack complex' 'negative regulation of complement activation') - SubClassOf('negative regulation of activation of membrane attack complex' 'regulation of activation of membrane attack complex') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000108 label: mRNA_with_frameshift - SubClassOf('mRNA_with_frameshift' 'mRNA') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000185 label: LymphocyteRichHL - SubClassOf('LymphocyteRichHL' 'HodgkinLymphoma') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001217 label: protein_coding_gene - SubClassOf('protein_coding_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001271 label: tmRNA_gene - SubClassOf('tmRNA_gene' 'ncRNA_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070870 label: heterochromatin maintenance involved in chromatin silencing - SubClassOf('heterochromatin maintenance involved in chromatin silencing' 'heterochromatin organization involved in chromatin silencing') - EquivalentClasses('heterochromatin maintenance involved in chromatin silencing' ObjectSomeValueFrom('part_of' 'chromatin silencing') ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000145 label: VascularEctasias - SubClassOf('VascularEctasias' 'HamartomaOrMalformation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061176 label: type Ib terminal bouton - SubClassOf('type Ib terminal bouton' 'type I terminal bouton') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000364 label: transposable_element_flanking_region - SubClassOf('transposable_element_flanking_region' 'flanking_region') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000199 label: AnaplasticLargeCellLymphoma - SubClassOf('AnaplasticLargeCellLymphoma' 'MatureTOrNKCellNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043046 label: DNA methylation involved in gamete generation - SubClassOf('DNA methylation involved in gamete generation' 'DNA methylation') - SubClassOf('DNA methylation involved in gamete generation' 'biological_process') - EquivalentClasses('DNA methylation' 'DNA methylation involved in gamete generation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0010978 label: gene silencing involved in chronological cell aging - SubClassOf('gene silencing involved in chronological cell aging' 'biological_process') - SubClassOf('gene silencing involved in chronological cell aging' 'gene silencing') - EquivalentClasses('gene silencing involved in chronological cell aging' 'gene silencing' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033413 label: UGU codon-amino acid adaptor activity - SubClassOf('UGU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000451 label: gene_with_polyadenylated_mRNA - SubClassOf('gene_with_polyadenylated_mRNA' 'protein_coding_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006434 label: seryl-tRNA aminoacylation - SubClassOf('seryl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') - EquivalentClasses('seryl-tRNA aminoacylation' 'mitochondrial seryl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000458 label: endonucleolytic cleavage between LSU-rRNA and 5S rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) - SubClassOf('endonucleolytic cleavage between LSU-rRNA and 5S rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)') - SubClassOf('endonucleolytic cleavage between LSU-rRNA and 5S rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)' ObjectSomeValueFrom('part_of' 'maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000043 label: ToxicActivity - SubClassOf('ToxicActivity' 'HarmfulRole') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000466 label: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - SubClassOf('maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'maturation of 5.8S rRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046011 label: regulation of oskar mRNA translation - SubClassOf('regulation of oskar mRNA translation' 'regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0051038 label: negative regulation of transcription during meiosis - SubClassOf('negative regulation of transcription during meiosis' 'regulation of transcription during meiosis') - SubClassOf('negative regulation of transcription during meiosis' 'negative regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001188 label: RNA polymerase I transcriptional preinitiation complex assembly - SubClassOf('RNA polymerase I transcriptional preinitiation complex assembly' 'DNA-dependent transcriptional preinitiation complex assembly') - SubClassOf('RNA polymerase I transcriptional preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase I promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_1900370 label: positive regulation of RNA interference - SubClassOf('positive regulation of RNA interference' 'regulation of RNA interference') - SubClassOf('positive regulation of RNA interference' 'positive regulation of posttranscriptional gene silencing') - EquivalentClasses('positive regulation of RNA interference' ObjectSomeValueFrom('positively_regulates' 'RNA interference') ) - SubClassOf('positive regulation of RNA interference' ObjectSomeValueFrom('positively_regulates' 'RNA interference')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000080 label: Oligodendrocyte - SubClassOf('Oligodendrocyte' 'MacroglialCell') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035281 label: pre-miRNA export from nucleus - SubClassOf('pre-miRNA export from nucleus' ObjectSomeValueFrom('part_of' 'gene silencing by miRNA')) - SubClassOf('pre-miRNA export from nucleus' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070143 label: mitochondrial alanyl-tRNA aminoacylation - EquivalentClasses('alanyl-tRNA aminoacylation' 'mitochondrial alanyl-tRNA aminoacylation' ) - SubClassOf('mitochondrial alanyl-tRNA aminoacylation' 'alanyl-tRNA aminoacylation') - SubClassOf('mitochondrial alanyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000374 label: Group III intron splicing - SubClassOf('Group III intron splicing' 'RNA splicing, via transesterification reactions with bulged adenosine as nucleophile') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000143 label: negative regulation of DNA-dependent transcription, initiation - EquivalentClasses('negative regulation of DNA-dependent transcription, initiation' ObjectSomeValueFrom('negatively_regulates' 'DNA-dependent transcription, initiation') ) - SubClassOf('negative regulation of DNA-dependent transcription, initiation' ObjectSomeValueFrom('negatively_regulates' 'DNA-dependent transcription, initiation')) - SubClassOf('negative regulation of DNA-dependent transcription, initiation' 'negative regulation of transcription, DNA-dependent') - SubClassOf('negative regulation of DNA-dependent transcription, initiation' 'regulation of DNA-dependent transcription, initiation') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001225 label: gene_silenced_by_histone_modification - SubClassOf('gene_silenced_by_histone_modification' 'silenced_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043921 label: modulation by host of viral transcription - SubClassOf('modulation by host of viral transcription' 'regulation of viral transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044028 label: DNA hypomethylation - SubClassOf('DNA hypomethylation' 'regulation of DNA methylation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000173 label: LymphoidNeoplasm - SubClassOf('LymphoidNeoplasm' 'LeukemiaAndLymphoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070852 label: cell body fiber - SubClassOf('cell body fiber' 'neuron projection') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071031 label: nuclear mRNA surveillance of mRNA 3'-end processing - SubClassOf('nuclear mRNA surveillance of mRNA 3'-end processing' ObjectSomeValueFrom('has_part' 'nuclear polyadenylation-dependent mRNA catabolic process')) - SubClassOf('nuclear mRNA surveillance of mRNA 3'-end processing' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000129 label: NutritionalDisease - SubClassOf('NutritionalDisease' 'Disease') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000548 label: gene_with_edited_transcript - SubClassOf('gene_with_edited_transcript' 'protein_coding_gene') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000189 label: PrecursorTCellAcuteLymphoblasticLeukemiaLymphoma - SubClassOf('PrecursorTCellAcuteLymphoblasticLeukemiaLymphoma' 'ImmatureBOrTCellNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034472 label: snRNA 3'-end processing - SubClassOf('snRNA 3'-end processing' 'ncRNA 3'-end processing') - SubClassOf('snRNA 3'-end processing' 'snRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001011 label: sequence-specific DNA binding RNA polymerase recruiting transcription factor activity - SubClassOf('sequence-specific DNA binding RNA polymerase recruiting transcription factor activity' 'sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036417 label: tRNA destabilization - SubClassOf('tRNA destabilization' 'regulation of tRNA stability') - SubClassOf('tRNA destabilization' 'RNA destabilization') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000167 label: promoter - SubClassOf('promoter' 'transcriptional_cis_regulatory_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070145 label: mitochondrial asparaginyl-tRNA aminoacylation - SubClassOf('mitochondrial asparaginyl-tRNA aminoacylation' 'asparaginyl-tRNA aminoacylation') - SubClassOf('mitochondrial asparaginyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') - EquivalentClasses('asparaginyl-tRNA aminoacylation' 'mitochondrial asparaginyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000486 label: cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) - SubClassOf('cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)')) - SubClassOf('cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)') - SubClassOf('cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 2S rRNA')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033429 label: CGU codon-amino acid adaptor activity - SubClassOf('CGU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001687 label: restriction_enzyme_recognition_site - SubClassOf('restriction_enzyme_recognition_site' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001014 label: snoRNA transcription from a type 2 RNA polymerase III promoter - SubClassOf('snoRNA transcription from a type 2 RNA polymerase III promoter' 'transcription from RNA polymerase III type 2 promoter') - SubClassOf('snoRNA transcription from a type 2 RNA polymerase III promoter' 'snoRNA transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045814 label: negative regulation of gene expression, epigenetic - SubClassOf('negative regulation of gene expression, epigenetic' 'negative regulation of gene expression') - SubClassOf('negative regulation of gene expression, epigenetic' 'regulation of gene expression, epigenetic') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033217 label: regulation of transcription from RNA polymerase II promoter in response to iron ion starvation - SubClassOf('regulation of transcription from RNA polymerase II promoter in response to iron ion starvation' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060902 label: regulation of hair cycle by BMP signaling pathway - EquivalentClasses('BMP signaling pathway' 'regulation of hair cycle by BMP signaling pathway' ) - SubClassOf('regulation of hair cycle by BMP signaling pathway' 'BMP signaling pathway') - SubClassOf('regulation of hair cycle by BMP signaling pathway' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000373 label: recombinationally_inverted_gene - SubClassOf('recombinationally_inverted_gene' 'recombinationally_rearranged_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001197 label: positive regulation of mating-type specific transcription from RNA polymerase II promoter - SubClassOf('positive regulation of mating-type specific transcription from RNA polymerase II promoter' 'positive regulation of mating-type specific transcription, DNA-dependent') - SubClassOf('positive regulation of mating-type specific transcription from RNA polymerase II promoter' 'regulation of mating-type specific transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010425 label: DNA methylation on cytosine within a CNG sequence - SubClassOf('DNA methylation on cytosine within a CNG sequence' 'DNA methylation on cytosine') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006420 label: arginyl-tRNA aminoacylation - EquivalentClasses('arginyl-tRNA aminoacylation' 'mitochondrial arginyl-tRNA aminoacylation' ) - SubClassOf('arginyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031167 label: rRNA methylation - SubClassOf('rRNA methylation' 'rRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030422 label: production of siRNA involved in RNA interference - SubClassOf('production of siRNA involved in RNA interference' 'production of small RNA involved in gene silencing by RNA') - SubClassOf('production of siRNA involved in RNA interference' ObjectSomeValueFrom('part_of' 'RNA interference')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000096 label: proplastid_gene - SubClassOf('proplastid_gene' 'plastid_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010999 label: regulation of eIF2 alpha phosphorylation by heme - SubClassOf('regulation of eIF2 alpha phosphorylation by heme' 'biological_process') - SubClassOf('regulation of eIF2 alpha phosphorylation by heme' ObjectSomeValueFrom('regulates' 'regulation of translational initiation by eIF2 alpha phosphorylation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033421 label: CCU codon-amino acid adaptor activity - SubClassOf('CCU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007253 label: cytoplasmic sequestering of NF-kappaB - SubClassOf('cytoplasmic sequestering of NF-kappaB' 'negative regulation of NF-kappaB import into nucleus') - SubClassOf('cytoplasmic sequestering of NF-kappaB' ObjectSomeValueFrom('part_of' 'negative regulation of I-kappaB kinase/NF-kappaB cascade')) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_9604 label: Hominidae - SubClassOf('Hominidae' 'Hominoidea') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002184 label: cytoplasmic translational termination - SubClassOf('cytoplasmic translational termination' 'translational termination') - SubClassOf('cytoplasmic translational termination' ObjectSomeValueFrom('part_of' 'cytoplasmic translation')) --- Class Changed: http://purl.org/obo/owl/omit#span_ProcessAggregate label: process_aggregate - SubClassOf('process_aggregate' 'processual_entity') - DisjointClasses('fiat_process_part' 'process_aggregate') - DisjointClasses('process' 'process'Aggregate) - DisjointClasses('process_aggregate' 'processual_context') - DisjointClasses('process_aggregate' 'process_boundary') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901488 label: positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process - SubClassOf('positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process' 'positive regulation of SREBP signaling pathway') - EquivalentClasses('positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process' ObjectSomeValueFrom('results_in' 'positive regulation of SREBP signaling pathway') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_2000634 label: regulation of primary miRNA processing - SubClassOf('regulation of primary miRNA processing' 'regulation of gene silencing by miRNA') - SubClassOf('regulation of primary miRNA processing' 'regulation of production of small RNA involved in gene silencing by RNA') - SubClassOf('regulation of primary miRNA processing' ObjectSomeValueFrom('regulates' 'primary miRNA processing')) - EquivalentClasses('regulation of primary miRNA processing' ObjectSomeValueFrom('regulates' 'primary miRNA processing') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033431 label: CGA codon-amino acid adaptor activity - SubClassOf('CGA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090052 label: regulation of chromatin silencing at centromere - SubClassOf('regulation of chromatin silencing at centromere' ObjectSomeValueFrom('regulates' 'chromatin silencing at centromere')) - EquivalentClasses('regulation of chromatin silencing at centromere' ObjectSomeValueFrom('regulates' 'chromatin silencing at centromere') ) - SubClassOf('regulation of chromatin silencing at centromere' 'regulation of chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002106 label: endonucleolytic cleaveage between SSU-rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) - SubClassOf('endonucleolytic cleaveage between SSU-rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)' 'endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000266 label: PulmonaryArteries - SubClassOf('PulmonaryArteries' 'Artery') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000128 label: Neoplasia - SubClassOf('Neoplasia' 'Disease') --- Class Changed: http://purl.org/obo/owl/omit#GO_0038056 label: negative regulation of BMP signaling pathway by negative regulation of BMP secretion - SubClassOf('negative regulation of BMP signaling pathway by negative regulation of BMP secretion' 'negative regulation of BMP signaling pathway') - EquivalentClasses('negative regulation of BMP signaling pathway by negative regulation of BMP secretion' ObjectSomeValueFrom('negatively_regulates' 'BMP signaling pathway') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0044295 label: axonal growth cone - SubClassOf('axonal growth cone' 'axon part') - SubClassOf('axonal growth cone' 'growth cone') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901224 label: positive regulation of NIK/NF-kappaB cascade - SubClassOf('positive regulation of NIK/NF-kappaB cascade' ObjectSomeValueFrom('positively_regulates' 'NIK/NF-kappaB cascade')) - SubClassOf('positive regulation of NIK/NF-kappaB cascade' 'regulation of NIK/NF-kappaB cascade') - EquivalentClasses('positive regulation of NIK/NF-kappaB cascade' ObjectSomeValueFrom('positively_regulates' 'NIK/NF-kappaB cascade') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0042790 label: transcription of nuclear large rRNA transcript from RNA polymerase I promoter - SubClassOf('transcription of nuclear large rRNA transcript from RNA polymerase I promoter' 'rRNA transcription') - SubClassOf('transcription of nuclear large rRNA transcript from RNA polymerase I promoter' 'transcription from RNA polymerase I promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061398 label: negative regulation of transcription from RNA polymerase II promoter in response to copper ion - SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to copper ion' 'negative regulation of transcription from RNA polymerase II promoter') - SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to copper ion' 'regulation of transcription from RNA polymerase II promoter in response to copper ion') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045901 label: positive regulation of translational elongation - SubClassOf('positive regulation of translational elongation' 'positive regulation of translation') - SubClassOf('positive regulation of translational elongation' ObjectSomeValueFrom('positively_regulates' 'translational elongation')) - SubClassOf('positive regulation of translational elongation' 'regulation of translational elongation') - EquivalentClasses('positive regulation of translational elongation' ObjectSomeValueFrom('positively_regulates' 'translational elongation') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0060963 label: positive regulation of ribosomal protein gene transcription from RNA polymerase II promoter - SubClassOf('positive regulation of ribosomal protein gene transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of ribosomal protein gene transcription from RNA polymerase II promoter' 'regulation of ribosomal protein gene transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000941 label: recombinationally_rearranged_vertebrate_immune_system_gene - SubClassOf('recombinationally_rearranged_vertebrate_immune_system_gene' 'recombinationally_rearranged_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002196 label: Ser-tRNA(Ala) hydrolase activity - SubClassOf('Ser-tRNA(Ala) hydrolase activity' 'aminoacyl-tRNA editing activity') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_2759 label: Eukaryota - SubClassOf('Eukaryota' 'CellularOrganism') --- Class Changed: http://purl.org/obo/owl/omit#GO_0009302 label: snoRNA transcription - SubClassOf('snoRNA transcription' 'transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002927 label: archaeosine-tRNA biosynthetic process - SubClassOf('archaeosine-tRNA biosynthetic process' 'tRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006393 label: termination of mitochondrial transcription - SubClassOf('termination of mitochondrial transcription' ObjectSomeValueFrom('part_of' 'transcription from mitochondrial promoter')) - SubClassOf('termination of mitochondrial transcription' 'biological_process') - EquivalentClasses('DNA-dependent transcription, termination' 'termination of mitochondrial transcription' ) - SubClassOf('termination of mitochondrial transcription' 'DNA-dependent transcription, termination') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000152 label: MuscleOrigin - SubClassOf('MuscleOrigin' 'BenignNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000143 label: NeuralDisease - SubClassOf('NeuralDisease' 'OrganSystemDisease') --- Class Changed: http://purl.org/obo/owl/omit#GO_0004887 label: thyroid hormone receptor activity - SubClassOf('thyroid hormone receptor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060899 label: regulation of transcription involved in eye field cell fate commitment of camera-type eye - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in eye field cell fate commitment of camera-type eye' ) - SubClassOf('regulation of transcription involved in eye field cell fate commitment of camera-type eye' 'regulation of transcription involved in cell fate commitment') - SubClassOf('regulation of transcription involved in eye field cell fate commitment of camera-type eye' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_190469 label: Bilateria incertae sedis - SubClassOf('Bilateria incertae sedis' 'Bilateria') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044464 label: cell part - SubClassOf('cell part' 'cellular_component') - EquivalentClasses('cell part' ObjectIntersectionOf('cellular_component' ObjectSomeValueFrom('part_of' 'cell')) ) - SubClassOf('cell part' ObjectSomeValueFrom('part_of' 'cell')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0046022 label: positive regulation of transcription from RNA polymerase II promoter during mitosis - SubClassOf('positive regulation of transcription from RNA polymerase II promoter during mitosis' 'positive regulation of transcription during mitosis') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter during mitosis' 'regulation of transcription from RNA polymerase II promoter, mitotic') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter during mitosis' 'positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter during mitosis' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0030909 label: non-intein-mediated protein splicing - SubClassOf('non-intein-mediated protein splicing' 'protein splicing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001193 label: maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase II promoter - SubClassOf('maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase II promoter' 'maintenance of transcriptional fidelity during DNA-dependent transcription elongation') - SubClassOf('maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase II promoter' ObjectSomeValueFrom('part_of' 'transcription elongation from RNA polymerase II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000110 label: sequence_feature - SubClassOf('sequence_feature' 'object') --- Class Changed: http://purl.org/obo/owl/omit#GO_0003746 label: translation elongation factor activity - SubClassOf('translation elongation factor activity' 'translation factor activity, nucleic acid binding') - SubClassOf('translation elongation factor activity' ObjectSomeValueFrom('part_of' 'translational elongation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0005883 label: neurofilament - SubClassOf('neurofilament' ObjectSomeValueFrom('part_of' 'neurofilament cytoskeleton')) - SubClassOf('neurofilament' 'axon part') - EquivalentClasses('neurofilament' ObjectSomeValueFrom('part_of' 'axon') ) --- Class Changed: http://purl.org/obo/owl/omit#snap_Disposition label: disposition - DisjointClasses('disposition' 'role') - DisjointClasses('disposition' 'function') - SubClassOf('disposition' 'realizable_entity') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901718 label: regulation of dipeptide transmembrane transport by regulation of transcription from RNA polymerase II promoter - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of dipeptide transmembrane transport by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of dipeptide transmembrane transport by regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('regulation of dipeptide transmembrane transport by regulation of transcription from RNA polymerase II promoter' 'regulation of dipeptide transport by regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000182 label: MatureTOrNKCellNeoplasm - SubClassOf('MatureTOrNKCellNeoplasm' 'LymphoidNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000749 label: positive regulation of chromatin silencing at rDNA - SubClassOf('positive regulation of chromatin silencing at rDNA' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing at rDNA')) - SubClassOf('positive regulation of chromatin silencing at rDNA' 'positive regulation of chromatin silencing') - EquivalentClasses('positive regulation of chromatin silencing at rDNA' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing at rDNA') ) - SubClassOf('positive regulation of chromatin silencing at rDNA' 'regulation of chromatin silencing at rDNA') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000418 label: signal_peptide - SubClassOf('signal_peptide' 'immature protein part') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_66288 label: Oxymonadida - SubClassOf('Oxymonadida' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002108 label: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) - SubClassOf('maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)' 'maturation of LSU-rRNA') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000064 label: Lymphocytes - SubClassOf('Lymphocytes' 'Agranulocyte') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071035 label: nuclear polyadenylation-dependent rRNA catabolic process - SubClassOf('nuclear polyadenylation-dependent rRNA catabolic process' 'nuclear polyadenylation-dependent ncRNA catabolic process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010628 label: positive regulation of gene expression - SubClassOf('positive regulation of gene expression' 'regulation of gene expression') - EquivalentClasses('positive regulation of gene expression' ObjectSomeValueFrom('positively_regulates' 'gene expression') ) - SubClassOf('positive regulation of gene expression' ObjectSomeValueFrom('positively_regulates' 'gene expression')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000338 label: Brain - SubClassOf('Brain' 'CentralNervousSystem') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036207 label: positive regulation of histone gene expression - SubClassOf('positive regulation of histone gene expression' 'regulation of histone gene expression') - SubClassOf('positive regulation of histone gene expression' 'positive regulation of gene expression') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000298 label: recombination_feature - SubClassOf('recombination_feature' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036208 label: negative regulation of histone gene expression - SubClassOf('negative regulation of histone gene expression' 'regulation of histone gene expression') - SubClassOf('negative regulation of histone gene expression' 'negative regulation of gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044529 label: regulation of mitochondrial rRNA stability - SubClassOf('regulation of mitochondrial rRNA stability' 'regulation of rRNA stability') --- Class Changed: http://purl.org/obo/owl/omit#GO_0040033 label: negative regulation of translation, ncRNA-mediated - SubClassOf('negative regulation of translation, ncRNA-mediated' 'negative regulation of translation') - SubClassOf('negative regulation of translation, ncRNA-mediated' 'regulation of translation, ncRNA-mediated') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001110 label: promoter clearance from RNA polymerase III promoter - SubClassOf('promoter clearance from RNA polymerase III promoter' 'promoter clearance during DNA-dependent transcription') - SubClassOf('promoter clearance from RNA polymerase III promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000321 label: AdrenalCortex - SubClassOf('AdrenalCortex' 'SuprarenalGlands') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000297 label: Colon - SubClassOf('Colon' 'DigestiveOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061175 label: type II terminal bouton - SubClassOf('type II terminal bouton' 'terminal bouton') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000133 label: Bacteriallnfection - SubClassOf('Bacteriallnfection' 'Infection') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030846 label: termination of RNA polymerase II transcription, poly(A)-coupled - SubClassOf('termination of RNA polymerase II transcription, poly(A)-coupled' 'termination of RNA polymerase II transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002946 label: tRNA C5-cytosine methylation - SubClassOf('tRNA C5-cytosine methylation' 'tRNA methylation') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000336 label: pseudogene - SubClassOf('pseudogene' 'biological_region') - SubClassOf('pseudogene' ObjectSomeValueFrom('non_functional_homolog_of' 'gene')) --- Class Changed: http://purl.org/obo/owl/omit#GO_1901580 label: regulation of telomeric RNA transcription from RNA pol II promoter - SubClassOf('regulation of telomeric RNA transcription from RNA pol II promoter' ObjectSomeValueFrom('regulates' 'telomeric RNA transcription from RNA pol II promoter')) - EquivalentClasses('regulation of telomeric RNA transcription from RNA pol II promoter' ObjectSomeValueFrom('regulates' 'telomeric RNA transcription from RNA pol II promoter') ) - SubClassOf('regulation of telomeric RNA transcription from RNA pol II promoter' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006419 label: alanyl-tRNA aminoacylation - EquivalentClasses('alanyl-tRNA aminoacylation' 'mitochondrial alanyl-tRNA aminoacylation' ) - SubClassOf('alanyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000223 label: Angiosarcoma - SubClassOf('Angiosarcoma' 'Sarcoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045292 label: mRNA cis splicing, via spliceosome - SubClassOf('mRNA cis splicing, via spliceosome' 'mRNA splicing, via spliceosome') --- Class Changed: http://purl.org/obo/owl/omit#snap_Continuant label: continuant - SubClassOf('continuant' ObjectSomeValueFrom('fromTaxon' 'Organism')) - EquivalentClasses('continuant' ObjectUnionOf('dependent_continuant' 'independent_continuant' 'spatial_region') ) - SubClassOf('continuant' 'entity') - DisjointClasses('continuant' 'occurrent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035949 label: positive regulation of gluconeogenesis by negative regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of gluconeogenesis by negative regulation of transcription from RNA polymerase II promoter' 'regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of gluconeogenesis by negative regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of gluconeogenesis by negative regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase II promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0036086 label: positive regulation of transcription from RNA polymerase II promoter in response to iron ion starvation - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to iron ion starvation' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to iron ion starvation' 'regulation of transcription from RNA polymerase II promoter in response to iron ion starvation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0008990 label: rRNA (guanine-N2-)-methyltransferase activity - SubClassOf('rRNA (guanine-N2-)-methyltransferase activity' 'rRNA (guanine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000699 label: junction - SubClassOf('junction' 'sequence_feature') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007075 label: positive regulation of transcription on exit from mitosis, from RNA polymerase III promoter - SubClassOf('positive regulation of transcription on exit from mitosis, from RNA polymerase III promoter' 'positive regulation of transcription on exit from mitosis') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035958 label: regulation of glyoxylate cycle by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of glyoxylate cycle by regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of glyoxylate cycle by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0019086 label: late viral mRNA transcription - SubClassOf('late viral mRNA transcription' 'viral transcription') - SubClassOf('late viral mRNA transcription' 'mRNA transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006415 label: translational termination - EquivalentClasses('translational termination' 'mitochondrial translational termination' ) - SubClassOf('translational termination' ObjectSomeValueFrom('part_of' 'translation')) - SubClassOf('translational termination' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000726 label: repeat_unit - SubClassOf('repeat_unit' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033462 label: GGC codon-amino acid adaptor activity - SubClassOf('GGC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_1990021 label: Schaffer axon collateral - SubClassOf('Schaffer axon collateral' 'axon collateral') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070124 label: mitochondrial translational initiation - SubClassOf('mitochondrial translational initiation' 'translational initiation') - SubClassOf('mitochondrial translational initiation' ObjectSomeValueFrom('part_of' 'mitochondrial translation')) - EquivalentClasses('translational initiation' 'mitochondrial translational initiation' ) - SubClassOf('mitochondrial translational initiation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030631 label: pyrrolysine incorporation - SubClassOf('pyrrolysine incorporation' 'translational readthrough') --- Class Changed: http://purl.org/obo/owl/omit#snap_ZeroDimensionalRegion label: zero_dimensional_region - DisjointClasses('three_dimensional_region' 'zero_dimensional_region') - DisjointClasses('one_dimensional_region' 'zero_dimensional_region') - DisjointClasses('two_dimensional_region' 'zero_dimensional_region') - SubClassOf('zero_dimensional_region' 'spatial_region') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000099 label: proviral_gene - SubClassOf('proviral_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_314295 label: Hominoidea - SubClassOf('Hominoidea' 'Catarrhini') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001076 label: RNA polymerase II transcription factor binding transcription factor activity - SubClassOf('RNA polymerase II transcription factor binding transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter')) - SubClassOf('RNA polymerase II transcription factor binding transcription factor activity' ObjectSomeValueFrom('part_of' 'regulation of transcription from RNA polymerase II promoter')) - SubClassOf('RNA polymerase II transcription factor binding transcription factor activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000975 label: minicircle_gene - SubClassOf('minicircle_gene' 'kinetoplast_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000481 label: maturation of 5S rRNA - SubClassOf('maturation of 5S rRNA' 'rRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036308 label: 16S rRNA (guanine(1516)-N(2))-methyltransferase activity - SubClassOf('16S rRNA (guanine(1516)-N(2))-methyltransferase activity' 'rRNA (guanine-N2-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000967 label: rRNA 5'-end processing - SubClassOf('rRNA 5'-end processing' 'ncRNA 5'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030425 label: dendrite - SubClassOf('dendrite' 'neuron projection') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060852 label: regulation of transcription involved in venous endothelial cell fate commitment - SubClassOf('regulation of transcription involved in venous endothelial cell fate commitment' 'biological_process') - SubClassOf('regulation of transcription involved in venous endothelial cell fate commitment' 'regulation of transcription involved in cell fate commitment') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in venous endothelial cell fate commitment' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0035551 label: protein initiator methionine removal involved in protein maturation - SubClassOf('protein initiator methionine removal involved in protein maturation' 'protein processing') - EquivalentClasses('protein initiator methionine removal involved in protein maturation' ObjectSomeValueFrom('part_of' 'protein maturation') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0045993 label: negative regulation of translational initiation by iron - SubClassOf('negative regulation of translational initiation by iron' 'regulation of translational initiation by iron') - SubClassOf('negative regulation of translational initiation by iron' 'negative regulation of translational initiation') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000766 label: negative regulation of cytoplasmic translation - EquivalentClasses('negative regulation of cytoplasmic translation' ObjectSomeValueFrom('negatively_regulates' 'cytoplasmic translation') ) - SubClassOf('negative regulation of cytoplasmic translation' 'regulation of cytoplasmic translation') - SubClassOf('negative regulation of cytoplasmic translation' ObjectSomeValueFrom('negatively_regulates' 'cytoplasmic translation')) - SubClassOf('negative regulation of cytoplasmic translation' 'negative regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0009008 label: DNA-methyltransferase activity - SubClassOf('DNA-methyltransferase activity' 'biological_process') - SubClassOf('DNA-methyltransferase activity' ObjectSomeValueFrom('part_of' 'DNA methylation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000465 label: exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - SubClassOf('exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'exonucleolytic trimming involved in rRNA processing') - SubClassOf('exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) - SubClassOf('exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'rRNA 5'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030533 label: triplet codon-amino acid adaptor activity - SubClassOf('triplet codon-amino acid adaptor activity' 'biological_process') - SubClassOf('triplet codon-amino acid adaptor activity' ObjectSomeValueFrom('part_of' 'translation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0048786 label: presynaptic active zone - SubClassOf('presynaptic active zone' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036031 label: recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex - SubClassOf('recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex' ObjectSomeValueFrom('part_of' '7-methylguanosine mRNA capping')) - SubClassOf('recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000357 label: Uterus - SubClassOf('Uterus' 'FemaleReproductiveSystem') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035951 label: positive regulation of oligopeptide transport by positive regulation of transcription from RNA polymerase II promoter - EquivalentClasses('positive regulation of oligopeptide transport by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) - SubClassOf('positive regulation of oligopeptide transport by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of oligopeptide transport by positive regulation of transcription from RNA polymerase II promoter' 'regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039560 label: suppression by virus of host IRF9 activity - SubClassOf('suppression by virus of host IRF9 activity' 'suppression by virus of host transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097462 label: Lewy neurite - SubClassOf('Lewy neurite' 'neuron projection') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901537 label: positive regulation of DNA demethylation - SubClassOf('positive regulation of DNA demethylation' 'regulation of DNA demethylation') - SubClassOf('positive regulation of DNA demethylation' ObjectSomeValueFrom('positively_regulates' 'DNA demethylation')) - EquivalentClasses('positive regulation of DNA demethylation' ObjectSomeValueFrom('positively_regulates' 'DNA demethylation') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0002192 label: IRES-dependent translational initiation - SubClassOf('IRES-dependent translational initiation' 'cap-independent translational initiation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000494 label: box C/D snoRNA 3'-end processing - SubClassOf('box C/D snoRNA 3'-end processing' 'box C/D snoRNA processing') - SubClassOf('box C/D snoRNA 3'-end processing' 'snoRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033402 label: UUC codon-amino acid adaptor activity - SubClassOf('UUC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000310 label: AscendingColon - SubClassOf('AscendingColon' 'Colon') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000308 label: SalivaGlands - SubClassOf('SalivaGlands' 'DigestiveOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043618 label: regulation of transcription from RNA polymerase II promoter in response to stress - SubClassOf('regulation of transcription from RNA polymerase II promoter in response to stress' 'regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of transcription from RNA polymerase II promoter in response to stress' 'regulation of DNA-dependent transcription in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032793 label: positive regulation of CREB transcription factor activity - SubClassOf('positive regulation of CREB transcription factor activity' 'positive regulation of sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001056 label: RNA polymerase III activity - SubClassOf('RNA polymerase III activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter')) - SubClassOf('RNA polymerase III activity' 'biological_process') - EquivalentClasses('RNA polymerase III activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000207 label: Hemangiopericytoma - SubClassOf('Hemangiopericytoma' 'Carcinoma') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000298 label: Duodenum - SubClassOf('Duodenum' 'DigestiveOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010674 label: negative regulation of transcription from RNA polymerase II promoter during meiosis - SubClassOf('negative regulation of transcription from RNA polymerase II promoter during meiosis' 'regulation of transcription from RNA polymerase II promoter during meiosis') - SubClassOf('negative regulation of transcription from RNA polymerase II promoter during meiosis' 'negative regulation of transcription during meiosis') - SubClassOf('negative regulation of transcription from RNA polymerase II promoter during meiosis' 'negative regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046016 label: positive regulation of transcription by glucose - SubClassOf('positive regulation of transcription by glucose' 'regulation of transcription by glucose') - SubClassOf('positive regulation of transcription by glucose' 'carbon catabolite activation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044304 label: main axon - SubClassOf('main axon' 'axon part') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000136 label: PrionDisease - SubClassOf('PrionDisease' 'Infection') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071046 label: nuclear polyadenylation-dependent ncRNA catabolic process - SubClassOf('nuclear polyadenylation-dependent ncRNA catabolic process' 'polyadenylation-dependent ncRNA catabolic process') --- Class Changed: http://purl.org/obo/owl/omit#snap_ObjectAggregate label: object_aggregate - DisjointClasses('object_aggregate' 'site') - DisjointClasses('fiat_object_part' 'object_aggregate') - DisjointClasses('object' 'object_aggregate') - SubClassOf('object_aggregate' 'material_entity') - DisjointClasses('object_aggregate' 'object_boundary') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034227 label: tRNA thio-modification - SubClassOf('tRNA thio-modification' 'tRNA modification') - EquivalentClasses('tRNA thio-modification' 'mitochondrial tRNA thio-modification' ) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000633 label: monocistronic_mRNA - SubClassOf('monocistronic_mRNA' 'mRNA') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000000 label: integrated_mobile_genetic_element - SubClassOf('integrated_mobile_genetic_element' 'mobile_genetic_element') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006447 label: regulation of translational initiation by iron - SubClassOf('regulation of translational initiation by iron' 'regulation of translational initiation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034966 label: intronic box H/ACA snoRNA processing - SubClassOf('intronic box H/ACA snoRNA processing' 'box H/ACA snoRNA processing') - SubClassOf('intronic box H/ACA snoRNA processing' 'intronic snoRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016435 label: rRNA (guanine) methyltransferase activity - SubClassOf('rRNA (guanine) methyltransferase activity' 'rRNA methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043620 label: regulation of DNA-dependent transcription in response to stress - SubClassOf('regulation of DNA-dependent transcription in response to stress' 'regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030743 label: rRNA (adenosine-2'-O-)-methyltransferase activity - SubClassOf('rRNA (adenosine-2'-O-)-methyltransferase activity' 'rRNA (adenine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031123 label: RNA 3'-end processing - EquivalentClasses('mitochondrial RNA 3'-end processing' 'RNA 3'-end processing' ) - SubClassOf('RNA 3'-end processing' 'RNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042757 label: giant axon - SubClassOf('giant axon' 'axon') --- Class Changed: http://purl.org/obo/owl/omit#snap_Role label: role - DisjointClasses('disposition' 'role') - SubClassOf('role' 'realizable_entity') - DisjointClasses('function' 'role') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000283 label: PulmonaryValve - SubClassOf('PulmonaryValve' 'Valves') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000109 label: SkeletalMuscle - SubClassOf('SkeletalMuscle' 'MuscleTissue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001970 label: positive regulation of activation of membrane attack complex - SubClassOf('positive regulation of activation of membrane attack complex' 'positive regulation of complement activation') - SubClassOf('positive regulation of activation of membrane attack complex' 'regulation of activation of membrane attack complex') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035969 label: positive regulation of sterol import by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of sterol import by positive regulation of transcription from RNA polymerase II promoter' 'regulation of sterol import by regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of sterol import by positive regulation of transcription from RNA polymerase II promoter' 'regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of sterol import by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0006368 label: transcription elongation from RNA polymerase II promoter - SubClassOf('transcription elongation from RNA polymerase II promoter' 'DNA-dependent transcription, elongation') - SubClassOf('transcription elongation from RNA polymerase II promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0002330 label: pre-B cell receptor expression - SubClassOf('pre-B cell receptor expression' 'gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_1990027 label: S bouton - SubClassOf('S bouton' 'terminal bouton') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070146 label: mitochondrial aspartyl-tRNA aminoacylation - SubClassOf('mitochondrial aspartyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') - SubClassOf('mitochondrial aspartyl-tRNA aminoacylation' 'aspartyl-tRNA aminoacylation') - EquivalentClasses('aspartyl-tRNA aminoacylation' 'mitochondrial aspartyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0044293 label: dendriole - SubClassOf('dendriole' 'dendrite terminus') --- Class Changed: http://purl.org/obo/owl/omit#GO_0075522 label: IRES-dependent viral translational initiation - SubClassOf('IRES-dependent viral translational initiation' ObjectSomeValueFrom('part_of' 'viral translation')) - SubClassOf('IRES-dependent viral translational initiation' 'IRES-dependent translational initiation') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901407 label: regulation of phosphorylation of RNA polymerase II C-terminal domain - SubClassOf('regulation of phosphorylation of RNA polymerase II C-terminal domain' 'biological_process') - SubClassOf('regulation of phosphorylation of RNA polymerase II C-terminal domain' ObjectSomeValueFrom('regulates' 'phosphorylation of RNA polymerase II C-terminal domain')) - EquivalentClasses('regulation of phosphorylation of RNA polymerase II C-terminal domain' ObjectSomeValueFrom('regulates' 'phosphorylation of RNA polymerase II C-terminal domain') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001026 label: TFIIIB-type transcription factor activity - SubClassOf('TFIIIB-type transcription factor activity' 'RNA polymerase III transcription factor binding transcription factor activity') - SubClassOf('TFIIIB-type transcription factor activity' 'core RNA polymerase III binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001143 label: mitochondrial RNA polymerase core promoter sequence-specific DNA binding transcription factor activity - SubClassOf('mitochondrial RNA polymerase core promoter sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding mitochondrial RNA polymerase transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032064 label: positive regulation of translational initiation in response to osmotic stress - SubClassOf('positive regulation of translational initiation in response to osmotic stress' 'positive regulation of translation in response to osmotic stress') - SubClassOf('positive regulation of translational initiation in response to osmotic stress' 'positive regulation of translational initiation in response to stress') - SubClassOf('positive regulation of translational initiation in response to osmotic stress' 'regulation of translational initiation in response to osmotic stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061415 label: negative regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source - SubClassOf('negative regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source' 'regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source') - SubClassOf('negative regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source' 'carbon catabolite repression of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060964 label: regulation of gene silencing by miRNA - EquivalentClasses('regulation of gene silencing by miRNA' ObjectSomeValueFrom('regulates' 'gene silencing by miRNA') ) - SubClassOf('regulation of gene silencing by miRNA' ObjectSomeValueFrom('regulates' 'gene silencing by miRNA')) - SubClassOf('regulation of gene silencing by miRNA' 'regulation of posttranscriptional gene silencing') - SubClassOf('regulation of gene silencing by miRNA' 'regulation of gene silencing by RNA') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000178 label: PrimaryMyelofibrosis - SubClassOf('PrimaryMyelofibrosis' 'ChronicMyeloproliferativeDisorders') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036091 label: positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress' 'regulation of transcription from RNA polymerase II promoter in response to oxidative stress') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000481 label: CellularOrganism - SubClassOf('CellularOrganism' 'Organism') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043194 label: axon initial segment - SubClassOf('axon initial segment' ObjectSomeValueFrom('part_of' 'main axon')) - SubClassOf('axon initial segment' 'axon part') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_33317 label: Protostomia - SubClassOf('Protostomia' 'Bilateria') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000170 label: AcuteMyelogenousLeukemia - SubClassOf('AcuteMyelogenousLeukemia' 'LeukemiaAndLymphoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006428 label: isoleucyl-tRNA aminoacylation - EquivalentClasses('isoleucyl-tRNA aminoacylation' 'mitochondrial isoleucyl-tRNA aminoacylation' ) - SubClassOf('isoleucyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000069 label: CD4 - SubClassOf('CD4' 'TLymphocytes') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000101 label: EpithelialTissue - SubClassOf('EpithelialTissue' 'AdultTissue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097381 label: photoreceptor disc membrane - SubClassOf('photoreceptor disc membrane' ObjectSomeValueFrom('part_of' 'photoreceptor outer segment')) - SubClassOf('photoreceptor disc membrane' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000191 label: DiffuseLargeBCellLymphoma - SubClassOf('DiffuseLargeBCellLymphoma' 'MatureBCellNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070157 label: mitochondrial prolyl-tRNA aminoacylation - SubClassOf('mitochondrial prolyl-tRNA aminoacylation' 'prolyl-tRNA aminoacylation') - SubClassOf('mitochondrial prolyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') - EquivalentClasses('prolyl-tRNA aminoacylation' 'mitochondrial prolyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001209 label: metal ion regulated sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription - SubClassOf('metal ion regulated sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' 'metal ion regulated sequence-specific DNA binding transcription factor activity') - SubClassOf('metal ion regulated sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' ObjectSomeValueFrom('part_of' 'positive regulation of transcription, DNA-dependent')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0070054 label: mRNA splicing, via endonucleolytic cleavage and ligation - SubClassOf('mRNA splicing, via endonucleolytic cleavage and ligation' 'RNA splicing, via endonucleolytic cleavage and ligation') - SubClassOf('mRNA splicing, via endonucleolytic cleavage and ligation' 'mRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000031 label: LowPressure - SubClassOf('LowPressure' 'Pressure') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900410 label: regulation of histone modification by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of histone modification by regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of histone modification by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of histone modification by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000462 label: pseudogenic_region - SubClassOf('pseudogenic_region' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031425 label: chloroplast RNA processing - SubClassOf('chloroplast RNA processing' 'RNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039603 label: TBP-class protein binding involved in viral suppression of host transcription initiation from RNA polymerase II promoter - SubClassOf('TBP-class protein binding involved in viral suppression of host transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('part_of' 'suppression by virus of host transcription initiation from RNA polymerase II promoter')) - SubClassOf('TBP-class protein binding involved in viral suppression of host transcription initiation from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046781 label: dispersion by virus of host splicing factors - SubClassOf('dispersion by virus of host splicing factors' 'modification by virus of host mRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000568 label: bidirectional_promoter - SubClassOf('bidirectional_promoter' 'promoter') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000131 label: ChomosomalDisorder - SubClassOf('ChomosomalDisorder' 'GeneticDisease') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060633 label: negative regulation of transcription initiation from RNA polymerase II promoter - SubClassOf('negative regulation of transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription initiation from RNA polymerase II promoter')) - EquivalentClasses('negative regulation of transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription initiation from RNA polymerase II promoter') ) - SubClassOf('negative regulation of transcription initiation from RNA polymerase II promoter' 'regulation of transcription initiation from RNA polymerase II promoter') - SubClassOf('negative regulation of transcription initiation from RNA polymerase II promoter' 'negative regulation of DNA-dependent transcription, initiation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000124 label: AutoimmuneDisorder - SubClassOf('AutoimmuneDisorder' 'Disease') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901408 label: negative regulation of phosphorylation of RNA polymerase II C-terminal domain - SubClassOf('negative regulation of phosphorylation of RNA polymerase II C-terminal domain' 'regulation of phosphorylation of RNA polymerase II C-terminal domain') - SubClassOf('negative regulation of phosphorylation of RNA polymerase II C-terminal domain' ObjectSomeValueFrom('negatively_regulates' 'phosphorylation of RNA polymerase II C-terminal domain')) - EquivalentClasses('negative regulation of phosphorylation of RNA polymerase II C-terminal domain' ObjectSomeValueFrom('negatively_regulates' 'phosphorylation of RNA polymerase II C-terminal domain') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0043856 label: anti-sigma factor antagonist activity - SubClassOf('anti-sigma factor antagonist activity' ObjectSomeValueFrom('part_of' 'positive regulation of transcription, DNA-dependent')) - SubClassOf('anti-sigma factor antagonist activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046017 label: regulation of transcription from RNA polymerase I promoter, mitotic - SubClassOf('regulation of transcription from RNA polymerase I promoter, mitotic' 'regulation of transcription during mitosis') - SubClassOf('regulation of transcription from RNA polymerase I promoter, mitotic' 'regulation of transcription from RNA polymerase I promoter') - EquivalentClasses('regulation of transcription from RNA polymerase I promoter' 'regulation of transcription from RNA polymerase I promoter, mitotic' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001192 label: maintenance of transcriptional fidelity during DNA-dependent transcription elongation - SubClassOf('maintenance of transcriptional fidelity during DNA-dependent transcription elongation' ObjectSomeValueFrom('part_of' 'DNA-dependent transcription, elongation')) - SubClassOf('maintenance of transcriptional fidelity during DNA-dependent transcription elongation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001089 label: TFIIF-class binding transcription factor activity - SubClassOf('TFIIF-class binding transcription factor activity' 'RNA polymerase II basal transcription factor binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_40674 label: Mammalia - SubClassOf('Mammalia' 'Amniota') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042347 label: negative regulation of NF-kappaB import into nucleus - SubClassOf('negative regulation of NF-kappaB import into nucleus' ObjectSomeValueFrom('negatively_regulates' 'NF-kappaB import into nucleus')) - EquivalentClasses('negative regulation of NF-kappaB import into nucleus' ObjectSomeValueFrom('negatively_regulates' 'NF-kappaB import into nucleus') ) - SubClassOf('negative regulation of NF-kappaB import into nucleus' 'regulation of NF-kappaB import into nucleus') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006383 label: transcription from RNA polymerase III promoter - SubClassOf('transcription from RNA polymerase III promoter' 'transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061420 label: regulation of transcription from RNA polymerase II promoter in response to biotin starvation - SubClassOf('regulation of transcription from RNA polymerase II promoter in response to biotin starvation' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901213 label: regulation of transcription from RNA polymerase II promoter involved in heart development - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in heart development' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in heart development' 'regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in heart development' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002331 label: pre-B cell allelic exclusion - SubClassOf('pre-B cell allelic exclusion' 'regulation of gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000409 label: regulation of transcription by galactose - SubClassOf('regulation of transcription by galactose' 'carbon catabolite regulation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000637 label: positive regulation of gene silencing by miRNA - SubClassOf('positive regulation of gene silencing by miRNA' 'positive regulation of posttranscriptional gene silencing') - SubClassOf('positive regulation of gene silencing by miRNA' ObjectSomeValueFrom('positively_regulates' 'gene silencing by miRNA')) - EquivalentClasses('positive regulation of gene silencing by miRNA' ObjectSomeValueFrom('positively_regulates' 'gene silencing by miRNA') ) - SubClassOf('positive regulation of gene silencing by miRNA' 'regulation of gene silencing by miRNA') --- Class Changed: http://purl.org/obo/owl/omit#MOD_00030 label: N-formyl-L-methionine residue - SubClassOf('N-formyl-L-methionine residue' 'pre-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001645 label: genetic_marker - SubClassOf('genetic_marker' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030908 label: protein splicing - SubClassOf('protein splicing' 'protein processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900175 label: regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry - EquivalentClasses('regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' ObjectSomeValueFrom('regulates' 'nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry') ) - SubClassOf('regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' ObjectSomeValueFrom('regulates' 'nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry')) - SubClassOf('regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'regulation of nodal signaling pathway involved in determination of left/right asymmetry') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032589 label: neuron projection membrane - SubClassOf('neuron projection membrane' ObjectSomeValueFrom('part_of' 'neuron projection')) - SubClassOf('neuron projection membrane' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006436 label: tryptophanyl-tRNA aminoacylation - SubClassOf('tryptophanyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') - EquivalentClasses('tryptophanyl-tRNA aminoacylation' 'mitochondrial tryptophanyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033444 label: AAG codon-amino acid adaptor activity - SubClassOf('AAG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042734 label: presynaptic membrane - SubClassOf('presynaptic membrane' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000335 label: mRNA_with_minus_2_frameshift - SubClassOf('mRNA_with_minus_2_frameshift' 'mRNA_with_frameshift') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030426 label: growth cone - SubClassOf('growth cone' 'neuron part') - SubClassOf('growth cone' ObjectSomeValueFrom('part_of' 'neuron projection')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0006421 label: asparaginyl-tRNA aminoacylation - SubClassOf('asparaginyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') - EquivalentClasses('asparaginyl-tRNA aminoacylation' 'mitochondrial asparaginyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#MOD_00427 label: methylated residue - SubClassOf('methylated residue' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900524 label: positive regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('positive regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001219 label: copper ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription - SubClassOf('copper ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription' 'metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0052666 label: tRNA (cytosine-2'-O-)-methyltransferase activity - SubClassOf('tRNA (cytosine-2'-O-)-methyltransferase activity' 'tRNA (cytosine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010621 label: negative regulation of transcription by transcription factor localization - SubClassOf('negative regulation of transcription by transcription factor localization' 'negative regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000130 label: OrganSystemDisease - SubClassOf('OrganSystemDisease' 'Disease') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060053 label: neurofilament cytoskeleton - SubClassOf('neurofilament cytoskeleton' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#snap_DependentContinuant label: dependent_continuant - SubClassOf('dependent_continuant' 'continuant') - EquivalentClasses('dependent_continuant' ObjectUnionOf('generically_dependent_continuant' 'specifically_dependent_continuant') ) - DisjointClasses('dependent_continuant' 'independent_continuant') - DisjointClasses('dependent_continuant' 'spatial_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900546 label: positive regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'positive regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('positive regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' 'regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039523 label: suppression by virus of host RNA polymerase II activity - SubClassOf('suppression by virus of host RNA polymerase II activity' 'suppression by virus of host transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035512 label: hydrolytic DNA demethylation - SubClassOf('hydrolytic DNA demethylation' 'DNA demethylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0008649 label: rRNA methyltransferase activity - SubClassOf('rRNA methyltransferase activity' ObjectSomeValueFrom('part_of' 'rRNA methylation')) - SubClassOf('rRNA methyltransferase activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001080 label: nitrogen catabolite activation of transcription from RNA polymerase II promoter - SubClassOf('nitrogen catabolite activation of transcription from RNA polymerase II promoter' 'nitrogen catabolite regulation of transcription from RNA polymerase II promoter') - SubClassOf('nitrogen catabolite activation of transcription from RNA polymerase II promoter' 'nitrogen catabolite activation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001144 label: mitochondrial RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity - SubClassOf('mitochondrial RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding mitochondrial RNA polymerase transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_1902352 label: negative regulation of filamentous growth of a population of unicellular organisms in response to starvation by negative regulation of transcription from RNA polymerase II promoter - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of filamentous growth of a population of unicellular organisms in response to starvation by negative regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('negative regulation of filamentous growth of a population of unicellular organisms in response to starvation by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') - SubClassOf('negative regulation of filamentous growth of a population of unicellular organisms in response to starvation by negative regulation of transcription from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000233 label: negative regulation of rRNA processing - SubClassOf('negative regulation of rRNA processing' ObjectSomeValueFrom('negatively_regulates' 'rRNA processing')) - EquivalentClasses('negative regulation of rRNA processing' ObjectSomeValueFrom('negatively_regulates' 'rRNA processing') ) - SubClassOf('negative regulation of rRNA processing' 'regulation of rRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000981 label: sequence-specific DNA binding RNA polymerase II transcription factor activity - SubClassOf('sequence-specific DNA binding RNA polymerase II transcription factor activity' ObjectSomeValueFrom('part_of' 'regulation of transcription from RNA polymerase II promoter')) - SubClassOf('sequence-specific DNA binding RNA polymerase II transcription factor activity' 'sequence-specific DNA binding transcription factor activity') - SubClassOf('sequence-specific DNA binding RNA polymerase II transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000034 label: LowTemperature - SubClassOf('LowTemperature' 'Temperature') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001007 label: RNA polymerase III transcription factor binding transcription factor activity - SubClassOf('RNA polymerase III transcription factor binding transcription factor activity' 'biological_process') - SubClassOf('RNA polymerase III transcription factor binding transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter')) - SubClassOf('RNA polymerase III transcription factor binding transcription factor activity' ObjectSomeValueFrom('part_of' 'regulation of transcription from RNA polymerase III promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_1900392 label: regulation of transport by negative regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of transport by negative regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('regulation of transport by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'regulation of transport by negative regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001868 label: regulation of complement activation, lectin pathway - SubClassOf('regulation of complement activation, lectin pathway' 'regulation of complement activation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001196 label: regulation of mating-type specific transcription from RNA polymerase II promoter - SubClassOf('regulation of mating-type specific transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of mating-type specific transcription from RNA polymerase II promoter' 'regulation of mating-type specific transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001105 label: RNA polymerase II transcription coactivator activity - SubClassOf('RNA polymerase II transcription coactivator activity' 'RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription') - SubClassOf('RNA polymerase II transcription coactivator activity' 'RNA polymerase II transcription cofactor activity') - SubClassOf('RNA polymerase II transcription coactivator activity' ObjectSomeValueFrom('part_of' 'positive regulation of transcription from RNA polymerase II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0008033 label: tRNA processing - SubClassOf('tRNA processing' 'ncRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000366 label: LowerRespiratoryTract - SubClassOf('LowerRespiratoryTract' 'RespiratoryOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045974 label: regulation of translation, ncRNA-mediated - SubClassOf('regulation of translation, ncRNA-mediated' 'regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#MOD_00115 label: S-palmitoyl-L-cysteine - SubClassOf('S-palmitoyl-L-cysteine' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001079 label: nitrogen catabolite regulation of transcription from RNA polymerase II promoter - SubClassOf('nitrogen catabolite regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - SubClassOf('nitrogen catabolite regulation of transcription from RNA polymerase II promoter' 'nitrogen catabolite regulation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0052913 label: 16S rRNA (guanine(966)-N(2))-methyltransferase activity - SubClassOf('16S rRNA (guanine(966)-N(2))-methyltransferase activity' 'rRNA (guanine-N2-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0021919 label: BMP signaling pathway involved in spinal cord dorsal/ventral patterning - EquivalentClasses('BMP signaling pathway involved in spinal cord dorsal/ventral patterning' 'BMP signaling pathway' ) - SubClassOf('BMP signaling pathway involved in spinal cord dorsal/ventral patterning' 'BMP signaling pathway') - SubClassOf('BMP signaling pathway involved in spinal cord dorsal/ventral patterning' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000488 label: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) - SubClassOf('maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)' 'maturation of LSU-rRNA') --- Class Changed: http://purl.org/obo/owl/omit#SO_0005853 label: gene_cassette - SubClassOf('gene_cassette' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000334 label: Ligaments - SubClassOf('Ligaments' 'MusculoskeletalOrgan') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000326 label: Dermis - SubClassOf('Dermis' 'Skin') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032061 label: negative regulation of translation in response to osmotic stress - SubClassOf('negative regulation of translation in response to osmotic stress' 'regulation of translation in response to osmotic stress') - SubClassOf('negative regulation of translation in response to osmotic stress' 'negative regulation of translation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044747 label: mature miRNA 3'-end processing - SubClassOf('mature miRNA 3'-end processing' 'ncRNA 3'-end processing') - SubClassOf('mature miRNA 3'-end processing' ObjectSomeValueFrom('part_of' 'production of miRNAs involved in gene silencing by miRNA')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000279 label: LeftAtrium - SubClassOf('LeftAtrium' 'Atria') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006354 label: DNA-dependent transcription, elongation - SubClassOf('DNA-dependent transcription, elongation' ObjectSomeValueFrom('part_of' 'transcription, DNA-dependent')) - SubClassOf('DNA-dependent transcription, elongation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006423 label: cysteinyl-tRNA aminoacylation - SubClassOf('cysteinyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') - EquivalentClasses('cysteinyl-tRNA aminoacylation' 'mitochondrial cysteinyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000113 label: Mesoderm - SubClassOf('Mesoderm' 'EmbryonicTissue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031118 label: rRNA pseudouridine synthesis - SubClassOf('rRNA pseudouridine synthesis' 'rRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000704 label: gene - SubClassOf('gene' 'biological_region') - SubClassOf('gene' ObjectSomeValueFrom('involvedInTumor' 'Tumor')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0043124 label: negative regulation of I-kappaB kinase/NF-kappaB cascade - EquivalentClasses('negative regulation of I-kappaB kinase/NF-kappaB cascade' ObjectSomeValueFrom('negatively_regulates' 'I-kappaB kinase/NF-kappaB cascade') ) - SubClassOf('negative regulation of I-kappaB kinase/NF-kappaB cascade' 'regulation of I-kappaB kinase/NF-kappaB cascade') - SubClassOf('negative regulation of I-kappaB kinase/NF-kappaB cascade' ObjectSomeValueFrom('negatively_regulates' 'I-kappaB kinase/NF-kappaB cascade')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0039652 label: activation by virus of host NF-kappaB transcription factor activity - SubClassOf('activation by virus of host NF-kappaB transcription factor activity' 'modulation by virus of host transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061428 label: negative regulation of transcription from RNA polymerase II promoter in response to hypoxia - SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to hypoxia' 'negative regulation of transcription from RNA polymerase II promoter in response to stress') - SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to hypoxia' 'regulation of transcription from RNA polymerase II promoter in response to hypoxia') --- Class Changed: http://purl.org/obo/owl/omit#GO_0008494 label: translation activator activity - SubClassOf('translation activator activity' 'translation regulator activity, nucleic acid binding') - SubClassOf('translation activator activity' ObjectSomeValueFrom('part_of' 'positive regulation of translation')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000114 label: ExperimentalValidation - SubClassOf('ExperimentalValidation' 'biological_process') - SubClassOf('ExperimentalValidation' ObjectSomeValueFrom('experimentContainsMiRNA' 'miRNA')) - SubClassOf('ExperimentalValidation' ObjectSomeValueFrom('experimentContainsTarget' 'gene')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033416 label: UGG codon-amino acid adaptor activity - SubClassOf('UGG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000299 label: Esophagus - SubClassOf('Esophagus' 'DigestiveOrgan') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000363 label: Penis - SubClassOf('Penis' 'MaleReproductiveSystem') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000300 label: GallBladder - SubClassOf('GallBladder' 'DigestiveOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070575 label: peptide mating pheromone maturation involved in pheromone-induced unidirectional conjugation - SubClassOf('peptide mating pheromone maturation involved in pheromone-induced unidirectional conjugation' 'peptide pheromone maturation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000081 label: RadialGlialCell - SubClassOf('RadialGlialCell' 'MacroglialCell') --- Class Changed: http://purl.org/obo/owl/omit#GO_0052908 label: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity - SubClassOf('16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity' 'rRNA (adenine-N6-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097393 label: telomeric RNA transcription - SubClassOf('telomeric RNA transcription' 'transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000135 label: Parasiticlnfection - SubClassOf('Parasiticlnfection' 'Infection') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032786 label: positive regulation of DNA-dependent transcription, elongation - SubClassOf('positive regulation of DNA-dependent transcription, elongation' ObjectSomeValueFrom('positively_regulates' 'DNA-dependent transcription, elongation')) - EquivalentClasses('positive regulation of DNA-dependent transcription, elongation' ObjectSomeValueFrom('positively_regulates' 'DNA-dependent transcription, elongation') ) - SubClassOf('positive regulation of DNA-dependent transcription, elongation' 'regulation of DNA-dependent transcription, elongation') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000897 label: allelically_excluded_gene - SubClassOf('allelically_excluded_gene' 'epigenetically_modified_gene') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_207245 label: Fornicata - SubClassOf('Fornicata' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000734 label: exemplar_mRNA - SubClassOf('exemplar_mRNA' 'mRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031939 label: negative regulation of chromatin silencing at telomere - SubClassOf('negative regulation of chromatin silencing at telomere' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing at telomere')) - EquivalentClasses('negative regulation of chromatin silencing at telomere' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing at telomere') ) - SubClassOf('negative regulation of chromatin silencing at telomere' 'regulation of chromatin silencing at telomere') - SubClassOf('negative regulation of chromatin silencing at telomere' 'negative regulation of chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036095 label: positive regulation of invasive growth in response to glucose limitation by positive regulation of transcription from RNA polymerase II promoter - EquivalentClasses('positive regulation of invasive growth in response to glucose limitation by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'regulation of transcription from RNA polymerase II promoter') ) - SubClassOf('positive regulation of invasive growth in response to glucose limitation by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043122 label: regulation of I-kappaB kinase/NF-kappaB cascade - SubClassOf('regulation of I-kappaB kinase/NF-kappaB cascade' 'biological_process') - SubClassOf('regulation of I-kappaB kinase/NF-kappaB cascade' ObjectSomeValueFrom('regulates' 'I-kappaB kinase/NF-kappaB cascade')) - EquivalentClasses('regulation of I-kappaB kinase/NF-kappaB cascade' ObjectSomeValueFrom('regulates' 'I-kappaB kinase/NF-kappaB cascade') ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000304 label: Liver - SubClassOf('Liver' 'DigestiveOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061404 label: positive regulation of transcription from RNA polymerase II promoter in response to increased salt - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to increased salt' 'positive regulation of transcription from RNA polymerase II promoter in response to salt stress') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_42461 label: Opisthokonta incertae sedis - SubClassOf('Opisthokonta incertae sedis' 'Opisthokonta') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000139 label: PreTumor - SubClassOf('PreTumor' 'Neoplasia') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006431 label: methionyl-tRNA aminoacylation - SubClassOf('methionyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') - EquivalentClasses('methionyl-tRNA aminoacylation' 'mitochondrial methionyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#MOD_01152 label: carboxylated residue - SubClassOf('carboxylated residue' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000187 label: NodularSclerosingHL - SubClassOf('NodularSclerosingHL' 'HodgkinLymphoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043143 label: regulation of translation by machinery localization - SubClassOf('regulation of translation by machinery localization' 'regulation of translation') - EquivalentClasses('regulation of translation by machinery localization' ObjectSomeValueFrom('part_of' 'translation') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0010768 label: negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage - SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage' 'regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage') - SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage' 'negative regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000272 label: AorticArch - SubClassOf('AorticArch' 'Aorta') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090053 label: positive regulation of chromatin silencing at centromere - EquivalentClasses('positive regulation of chromatin silencing at centromere' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing at centromere') ) - SubClassOf('positive regulation of chromatin silencing at centromere' 'regulation of chromatin silencing at centromere') - SubClassOf('positive regulation of chromatin silencing at centromere' 'positive regulation of chromatin silencing') - SubClassOf('positive regulation of chromatin silencing at centromere' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing at centromere')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000372 label: NasalCavity - SubClassOf('NasalCavity' 'UpperRespiratoryTract') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036251 label: positive regulation of transcription from RNA polymerase II promoter in response to salt stress - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to salt stress' 'positive regulation of transcription from RNA polymerase II promoter in response to osmotic stress') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to salt stress' 'regulation of transcription from RNA polymerase II promoter in response to salt stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900363 label: regulation of mRNA polyadenylation - SubClassOf('regulation of mRNA polyadenylation' 'regulation of mRNA 3'-end processing') - SubClassOf('regulation of mRNA polyadenylation' ObjectSomeValueFrom('regulates' 'mRNA polyadenylation')) - EquivalentClasses('regulation of mRNA polyadenylation' ObjectSomeValueFrom('regulates' 'mRNA polyadenylation') ) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_28009 label: Choanoflagellida - SubClassOf('Choanoflagellida' 'Opisthokonta') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000798 label: engineered_transposable_element - SubClassOf('engineered_transposable_element' 'transposable_element') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061188 label: negative regulation of chromatin silencing at rDNA - EquivalentClasses('negative regulation of chromatin silencing at rDNA' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing at rDNA') ) - SubClassOf('negative regulation of chromatin silencing at rDNA' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing at rDNA')) - SubClassOf('negative regulation of chromatin silencing at rDNA' 'negative regulation of chromatin silencing') - SubClassOf('negative regulation of chromatin silencing at rDNA' 'regulation of chromatin silencing at rDNA') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000721 label: gene_with_dicistronic_primary_transcript - SubClassOf('gene_with_dicistronic_primary_transcript' 'gene_with_dicistronic_transcript') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_7735 label: Cephalochordata - SubClassOf('Cephalochordata' 'Chordata') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035600 label: tRNA methylthiolation - SubClassOf('tRNA methylthiolation' 'tRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0004704 label: NF-kappaB-inducing kinase activity - SubClassOf('NF-kappaB-inducing kinase activity' 'biological_process') - SubClassOf('NF-kappaB-inducing kinase activity' ObjectSomeValueFrom('part_of' 'NIK/NF-kappaB cascade')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0001224 label: gene_silenced_by_RNA_interference - SubClassOf('gene_silenced_by_RNA_interference' 'silenced_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032543 label: mitochondrial translation - SubClassOf('mitochondrial translation' 'biological_process') - SubClassOf('mitochondrial translation' 'translation') - EquivalentClasses('translation' 'mitochondrial translation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0090295 label: nitrogen catabolite repression of transcription - SubClassOf('nitrogen catabolite repression of transcription' 'nitrogen catabolite regulation of transcription') - SubClassOf('nitrogen catabolite repression of transcription' 'negative regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000327 label: Epidermis - SubClassOf('Epidermis' 'Skin') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030490 label: maturation of SSU-rRNA - SubClassOf('maturation of SSU-rRNA' 'rRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001216 label: sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription - SubClassOf('sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription' ObjectSomeValueFrom('part_of' 'positive regulation of transcription, DNA-dependent')) - SubClassOf('sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription' 'sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039548 label: suppression by virus of host IRF3 activity - SubClassOf('suppression by virus of host IRF3 activity' 'suppression by virus of host transcription') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000329 label: mRNA_with_plus_2_frameshift - SubClassOf('mRNA_with_plus_2_frameshift' 'mRNA_with_frameshift') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030510 label: regulation of BMP signaling pathway - SubClassOf('regulation of BMP signaling pathway' ObjectSomeValueFrom('regulates' 'BMP signaling pathway')) - EquivalentClasses('regulation of BMP signaling pathway' ObjectSomeValueFrom('regulates' 'BMP signaling pathway') ) - SubClassOf('regulation of BMP signaling pathway' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000833 label: transcript_region - SubClassOf('transcript_region' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000227 label: PsychologicalTreatment - SubClassOf('PsychologicalTreatment' 'Treatment') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000374 label: Bladder - SubClassOf('Bladder' 'UrinaryOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006627 label: protein processing involved in protein targeting to mitochondrion - SubClassOf('protein processing involved in protein targeting to mitochondrion' 'biological_process') - EquivalentClasses('protein processing involved in protein targeting to mitochondrion' 'protein processing' ) - SubClassOf('protein processing involved in protein targeting to mitochondrion' 'mitochondrial protein processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000033 label: HighTemperature - SubClassOf('HighTemperature' 'Temperature') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000710 label: gene_with_stop_codon_redefined_as_selenocysteine - SubClassOf('gene_with_stop_codon_redefined_as_selenocysteine' 'gene_with_stop_codon_read_through') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016480 label: negative regulation of transcription from RNA polymerase III promoter - SubClassOf('negative regulation of transcription from RNA polymerase III promoter' 'negative regulation of transcription, DNA-dependent') - EquivalentClasses('negative regulation of transcription from RNA polymerase III promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase III promoter') ) - SubClassOf('negative regulation of transcription from RNA polymerase III promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase III promoter')) - SubClassOf('negative regulation of transcription from RNA polymerase III promoter' 'regulation of transcription from RNA polymerase III promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043489 label: RNA stabilization - SubClassOf('RNA stabilization' 'regulation of RNA stability') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070159 label: mitochondrial threonyl-tRNA aminoacylation - SubClassOf('mitochondrial threonyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') - SubClassOf('mitochondrial threonyl-tRNA aminoacylation' 'threonyl-tRNA aminoacylation') - EquivalentClasses('threonyl-tRNA aminoacylation' 'mitochondrial threonyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0060150 label: viral triggering of virus induced gene silencing - SubClassOf('viral triggering of virus induced gene silencing' 'positive regulation of posttranscriptional gene silencing') --- Class Changed: http://purl.org/obo/owl/omit#PR_000018263 label: amino acid chain - SubClassOf('amino acid chain' 'molecular entity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010688 label: negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter - SubClassOf('negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') - SubClassOf('negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter' 'regulation of ribosomal protein gene transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000890 label: post_translationally_regulated_gene - SubClassOf('post_translationally_regulated_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000347 label: ParasympatheticNervousSystem - SubClassOf('ParasympatheticNervousSystem' 'AutonomicNervousSystem') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000633 label: positive regulation of pre-miRNA processing - SubClassOf('positive regulation of pre-miRNA processing' ObjectSomeValueFrom('positively_regulates' 'pre-miRNA processing')) - SubClassOf('positive regulation of pre-miRNA processing' 'regulation of pre-miRNA processing') - EquivalentClasses('positive regulation of pre-miRNA processing' ObjectSomeValueFrom('positively_regulates' 'pre-miRNA processing') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0061399 label: positive regulation of transcription from RNA polymerase II promoter in response to cobalt ion - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to cobalt ion' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#span_TemporalInstant label: temporal_instant - SubClassOf('temporal_instant' 'connected_temporal_region') - DisjointClasses('temporal_instant' 'temporal_interval') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000449 label: endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) - SubClassOf('endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)' 'endonucleolytic cleavage involved in rRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000127 label: Infection - SubClassOf('Infection' 'Disease') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034231 label: islet amyloid polypeptide processing - SubClassOf('islet amyloid polypeptide processing' 'peptide hormone processing') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_9479 label: Platyrrhini - SubClassOf('Platyrrhini' 'Simiiformes') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001138 label: TFIIH-class transcription factor recruiting transcription factor activity - SubClassOf('TFIIH-class transcription factor recruiting transcription factor activity' 'RNA polymerase II transcription factor recruiting transcription factor activity') - SubClassOf('TFIIH-class transcription factor recruiting transcription factor activity' 'TFIIH-class binding transcription factor activity') - SubClassOf('TFIIH-class transcription factor recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase II transcriptional preinitiation complex assembly')) --- Class Changed: http://purl.org/obo/owl/omit#snap_ObjectBoundary label: object_boundary - DisjointClasses('fiat_object_part' 'object_boundary') - DisjointClasses('object' 'object'Boundary) - DisjointClasses('material_entity' 'object_boundary') - DisjointClasses('object_boundary' 'site') - SubClassOf('object_boundary' 'independent_continuant') - DisjointClasses('object_aggregate' 'object_boundary') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001202 label: copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity - SubClassOf('copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity' 'metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0038049 label: ligand-activated RNA polymerase II transcription factor binding transcription factor activity - SubClassOf('ligand-activated RNA polymerase II transcription factor binding transcription factor activity' 'RNA polymerase II transcription factor binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032897 label: negative regulation of viral transcription - EquivalentClasses('negative regulation of viral transcription' ObjectSomeValueFrom('negatively_regulates' 'viral transcription') ) - SubClassOf('negative regulation of viral transcription' ObjectSomeValueFrom('negatively_regulates' 'viral transcription')) - SubClassOf('negative regulation of viral transcription' 'regulation of viral transcription') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000336 label: CentralNervousSystem - SubClassOf('CentralNervousSystem' 'NervousOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090282 label: positive regulation of transcription involved in G2/M transition of mitotic cell cycle - SubClassOf('positive regulation of transcription involved in G2/M transition of mitotic cell cycle' 'regulation of transcription involved in G2/M transition of mitotic cell cycle') - SubClassOf('positive regulation of transcription involved in G2/M transition of mitotic cell cycle' 'positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of transcription, DNA-dependent' 'positive regulation of transcription involved in G2/M transition of mitotic cell cycle' ) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000389 label: spot_42_RNA - SubClassOf('spot_42_RNA' 'small_regulatory_ncRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044634 label: negative regulation of complement activation, alternative pathway in other organism - SubClassOf('negative regulation of complement activation, alternative pathway in other organism' 'modulation of complement activation, alternative pathway in other organism') - SubClassOf('negative regulation of complement activation, alternative pathway in other organism' 'negative regulation of complement activation, alternative pathway') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000083 label: SchwannCell - SubClassOf('SchwannCell' 'MacroglialCell') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061504 label: cyclic threonylcarbamoyladenosine biosynthetic process - SubClassOf('cyclic threonylcarbamoyladenosine biosynthetic process' 'tRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010673 label: positive regulation of transcription from RNA polymerase II promoter during meiosis - SubClassOf('positive regulation of transcription from RNA polymerase II promoter during meiosis' 'regulation of transcription from RNA polymerase II promoter during meiosis') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter during meiosis' 'positive regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter during meiosis' 'positive regulation of transcription during meiosis') --- Class Changed: http://purl.org/obo/owl/omit#GO_1990030 label: pericellular basket - SubClassOf('pericellular basket' 'axon part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007225 label: patched ligand maturation - SubClassOf('patched ligand maturation' 'protein maturation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061396 label: regulation of transcription from RNA polymerase II promoter in response to copper ion - SubClassOf('regulation of transcription from RNA polymerase II promoter in response to copper ion' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0050779 label: RNA destabilization - SubClassOf('RNA destabilization' 'regulation of RNA stability') --- Class Changed: http://purl.org/obo/owl/omit#MOD_00033 label: crosslinked residues - SubClassOf('crosslinked residues' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010267 label: production of ta-siRNAs involved in RNA interference - SubClassOf('production of ta-siRNAs involved in RNA interference' 'production of siRNA involved in RNA interference') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006614 label: SRP-dependent cotranslational protein targeting to membrane - SubClassOf('SRP-dependent cotranslational protein targeting to membrane' 'biological_process') - SubClassOf('SRP-dependent cotranslational protein targeting to membrane' ObjectSomeValueFrom('has_part' 'translation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0071076 label: RNA 3' uridylation - SubClassOf('RNA 3' uridylation' 'RNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000366 label: insertion_site - SubClassOf('insertion_site' 'junction') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071893 label: BMP signaling pathway involved in nephric duct formation - SubClassOf('BMP signaling pathway involved in nephric duct formation' 'BMP signaling pathway') - SubClassOf('BMP signaling pathway involved in nephric duct formation' 'biological_process') - EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in nephric duct formation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0016485 label: protein processing - SubClassOf('protein processing' 'protein maturation') - EquivalentClasses('vacuolar protein processing' 'protein processing' ) - EquivalentClasses('protein processing involved in protein targeting to mitochondrion' 'protein processing' ) - EquivalentClasses('protein processing' 'protein processing in phagocytic vesicle' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0060966 label: regulation of gene silencing by RNA - SubClassOf('regulation of gene silencing by RNA' ObjectSomeValueFrom('regulates' 'gene silencing by RNA')) - EquivalentClasses('regulation of gene silencing by RNA' ObjectSomeValueFrom('regulates' 'gene silencing by RNA') ) - SubClassOf('regulation of gene silencing by RNA' 'regulation of gene silencing') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_10219 label: Hemichordata - SubClassOf('Hemichordata' 'Deuterostomia') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043766 label: Sep-tRNA:Cys-tRNA synthase activity - SubClassOf('Sep-tRNA:Cys-tRNA synthase activity' 'biological_process') - SubClassOf('Sep-tRNA:Cys-tRNA synthase activity' ObjectSomeValueFrom('part_of' 'conversion of O-phosphoseryl-tRNA to cysteinyl-tRNA')) --- Class Changed: http://purl.org/obo/owl/omit#PR_000000001 label: protein - SubClassOf('protein' ObjectSomeValueFrom('regulateProtein' 'miRNA')) - SubClassOf('protein' 'amino acid chain') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071212 label: subsynaptic reticulum - SubClassOf('subsynaptic reticulum' 'axon part') - SubClassOf('subsynaptic reticulum' ObjectSomeValueFrom('part_of' 'type I terminal bouton')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000319 label: AnteriorPituitary - SubClassOf('AnteriorPituitary' 'Pituitary') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071619 label: phosphorylation of RNA polymerase II C-terminal domain serine 2 residues - SubClassOf('phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' 'phosphorylation of RNA polymerase II C-terminal domain') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900415 label: regulation of fungal-type cell wall biogenesis by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of fungal-type cell wall biogenesis by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of fungal-type cell wall biogenesis by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of fungal-type cell wall biogenesis by regulation of transcription from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044324 label: regulation of transcription involved in anterior/posterior axis specification - EquivalentClasses('regulation of transcription, DNA-dependent' 'regulation of transcription involved in anterior/posterior axis specification' ) - SubClassOf('regulation of transcription involved in anterior/posterior axis specification' 'biological_process') - SubClassOf('regulation of transcription involved in anterior/posterior axis specification' 'regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006429 label: leucyl-tRNA aminoacylation - EquivalentClasses('leucyl-tRNA aminoacylation' 'mitochondrial leucyl-tRNA aminoacylation' ) - SubClassOf('leucyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035947 label: regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_2000976 label: regulation of transcription from RNA polymerase II promoter involved in detection of glucose - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in detection of glucose' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in detection of glucose' 'biological_process') - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in detection of glucose' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_2763 label: Rhodophyta - SubClassOf('Rhodophyta' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#snap_TwoDimensionalRegion label: two_dimensional_region - DisjointClasses('one_dimensional_region' 'two_dimensional_region') - DisjointClasses('two_dimensional_region' 'zero_dimensional_region') - SubClassOf('two_dimensional_region' 'spatial_region') - DisjointClasses('three_dimensional_region' 'two_dimensional_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000479 label: endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - SubClassOf('endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'endonucleolytic cleavage involved in rRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035392 label: maintenance of chromatin silencing at telomere - SubClassOf('maintenance of chromatin silencing at telomere' ObjectSomeValueFrom('part_of' 'chromatin silencing at telomere')) - SubClassOf('maintenance of chromatin silencing at telomere' 'maintenance of chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071733 label: transcriptional activation by promoter-enhancer looping - SubClassOf('transcriptional activation by promoter-enhancer looping' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035280 label: miRNA loading onto RISC involved in gene silencing by miRNA - SubClassOf('miRNA loading onto RISC involved in gene silencing by miRNA' ObjectSomeValueFrom('part_of' 'gene silencing by miRNA')) - SubClassOf('miRNA loading onto RISC involved in gene silencing by miRNA' 'small RNA loading onto RISC') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000362 label: Epididymis - SubClassOf('Epididymis' 'MaleReproductiveSystem') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000138 label: HamartomaOrMalformation - SubClassOf('HamartomaOrMalformation' 'Neoplasia') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033401 label: UUU codon-amino acid adaptor activity - SubClassOf('UUU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033120 label: positive regulation of RNA splicing - EquivalentClasses('positive regulation of RNA splicing' ObjectSomeValueFrom('positively_regulates' 'RNA splicing') ) - SubClassOf('positive regulation of RNA splicing' 'regulation of RNA splicing') - SubClassOf('positive regulation of RNA splicing' ObjectSomeValueFrom('positively_regulates' 'RNA splicing')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000042 label: Pathogenicity - SubClassOf('Pathogenicity' 'HarmfulRole') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060994 label: regulation of transcription from RNA polymerase II promoter involved in kidney development - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in kidney development' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in kidney development' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in kidney development' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044280 label: subplasmalemmal coating - SubClassOf('subplasmalemmal coating' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031938 label: regulation of chromatin silencing at telomere - SubClassOf('regulation of chromatin silencing at telomere' ObjectSomeValueFrom('regulates' 'chromatin silencing at telomere')) - EquivalentClasses('regulation of chromatin silencing at telomere' ObjectSomeValueFrom('regulates' 'chromatin silencing at telomere') ) - SubClassOf('regulation of chromatin silencing at telomere' 'regulation of chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0008650 label: rRNA (uridine-2'-O-)-methyltransferase activity - SubClassOf('rRNA (uridine-2'-O-)-methyltransferase activity' 'rRNA (uridine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036083 label: positive regulation of unsaturated fatty acid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of unsaturated fatty acid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of unsaturated fatty acid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) - SubClassOf('positive regulation of unsaturated fatty acid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000378 label: RNA exon ligation - SubClassOf('RNA exon ligation' ObjectSomeValueFrom('part_of' 'RNA splicing, via endonucleolytic cleavage and ligation')) - SubClassOf('RNA exon ligation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001194 label: maintenance of transcriptional fidelity during DNA-dependent transcription elongation from bacterial-type RNA polymerase promoter - SubClassOf('maintenance of transcriptional fidelity during DNA-dependent transcription elongation from bacterial-type RNA polymerase promoter' ObjectSomeValueFrom('part_of' 'transcription elongation from bacterial-type RNA polymerase promoter')) - SubClassOf('maintenance of transcriptional fidelity during DNA-dependent transcription elongation from bacterial-type RNA polymerase promoter' 'maintenance of transcriptional fidelity during DNA-dependent transcription elongation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043923 label: positive regulation by host of viral transcription - SubClassOf('positive regulation by host of viral transcription' 'modulation by host of viral transcription') - SubClassOf('positive regulation by host of viral transcription' 'positive regulation of viral transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030509 label: BMP signaling pathway - EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in mesodermal cell fate specification' ) - EquivalentClasses('BMP signaling pathway involved in spinal cord association neuron specification' 'BMP signaling pathway' ) - EquivalentClasses('BMP signaling pathway involved in spinal cord dorsal/ventral patterning' 'BMP signaling pathway' ) - EquivalentClasses('BMP signaling pathway' 'regulation of hair cycle by BMP signaling pathway' ) - EquivalentClasses('BMP signaling pathway' 'positive regulation of Wnt receptor signaling pathway by BMP signaling pathway' ) - EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in renal system segmentation' ) - EquivalentClasses('BMP signaling pathway' 'negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway' ) - EquivalentClasses('BMP signaling pathway involved in heart jogging' 'BMP signaling pathway' ) - EquivalentClasses('BMP signaling pathway involved in heart induction' 'BMP signaling pathway' ) - EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in ureter morphogenesis' ) - SubClassOf('BMP signaling pathway' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'BMP signaling pathway' ) - EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in heart development' ) - EquivalentClasses('BMP signaling pathway involved in growth plate cartilage chondrocyte development' 'BMP signaling pathway' ) - EquivalentClasses('BMP signaling pathway involved in forebrain neuron fate commitment' 'BMP signaling pathway' ) - EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in Malpighian tubule cell chemotaxis' ) - EquivalentClasses('BMP signaling pathway involved in determination of left/right symmetry' 'BMP signaling pathway' ) - EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in nephric duct formation' ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000280 label: RightAtrium - SubClassOf('RightAtrium' 'Atria') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000215 label: PulmonarySarcomatoidOrPleomorphicCarcinoma - SubClassOf('PulmonarySarcomatoidOrPleomorphicCarcinoma' 'Carcinoma') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000079 label: EpendymalCell - SubClassOf('EpendymalCell' 'MacroglialCell') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001121 label: transcription from bacterial-type RNA polymerase promoter - SubClassOf('transcription from bacterial-type RNA polymerase promoter' 'transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033562 label: co-transcriptional gene silencing by RNA interference machinery - SubClassOf('co-transcriptional gene silencing by RNA interference machinery' 'gene silencing by RNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045815 label: positive regulation of gene expression, epigenetic - SubClassOf('positive regulation of gene expression, epigenetic' 'positive regulation of gene expression') - SubClassOf('positive regulation of gene expression, epigenetic' 'regulation of gene expression, epigenetic') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061393 label: positive regulation of transcription from RNA polymerase II promoter in response to osmotic stress - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to osmotic stress' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to osmotic stress' 'regulation of transcription from RNA polymerase II promoter in response to osmotic stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_1902353 label: positive regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones - SubClassOf('positive regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones' 'negative regulation of transcription from RNA polymerase II promoter by pheromones') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter by pheromones' 'positive regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones' ) - SubClassOf('positive regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001137 label: TFIIF-class transcription factor recruiting transcription factor activity - SubClassOf('TFIIF-class transcription factor recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase II transcriptional preinitiation complex assembly')) - SubClassOf('TFIIF-class transcription factor recruiting transcription factor activity' 'RNA polymerase II transcription factor recruiting transcription factor activity') - SubClassOf('TFIIF-class transcription factor recruiting transcription factor activity' 'TFIIF-class binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000153 label: NervousOrigin - SubClassOf('NervousOrigin' 'BenignNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000381 label: regulation of alternative mRNA splicing, via spliceosome - SubClassOf('regulation of alternative mRNA splicing, via spliceosome' 'regulation of mRNA splicing, via spliceosome') - SubClassOf('regulation of alternative mRNA splicing, via spliceosome' ObjectSomeValueFrom('regulates' 'alternative mRNA splicing, via spliceosome')) - EquivalentClasses('regulation of alternative mRNA splicing, via spliceosome' ObjectSomeValueFrom('regulates' 'alternative mRNA splicing, via spliceosome') ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000263 label: FemoralArtery - SubClassOf('FemoralArtery' 'Artery') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_118072 label: Coelacanthimorpha - SubClassOf('Coelacanthimorpha' 'Sarcopterygii') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000862 label: capped_mRNA - SubClassOf('capped_mRNA' 'mRNA') --- Class Changed: http://purl.org/obo/owl/omit#MOD_00670 label: N-acylated residue - SubClassOf('N-acylated residue' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042796 label: snRNA transcription from RNA polymerase III promoter - SubClassOf('snRNA transcription from RNA polymerase III promoter' 'snRNA transcription') - SubClassOf('snRNA transcription from RNA polymerase III promoter' 'transcription from RNA polymerase III promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0072368 label: regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter' 'regulation of lipid transport by regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase II promoter') ) - SubClassOf('regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030702 label: chromatin silencing at centromere - SubClassOf('chromatin silencing at centromere' 'chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000730 label: regulation of termination of RNA polymerase I transcription - SubClassOf('regulation of termination of RNA polymerase I transcription' 'regulation of DNA-dependent transcription, termination') - EquivalentClasses('regulation of termination of RNA polymerase I transcription' ObjectSomeValueFrom('regulates' 'termination of RNA polymerase I transcription') ) - SubClassOf('regulation of termination of RNA polymerase I transcription' 'regulation of transcription from RNA polymerase I promoter') - SubClassOf('regulation of termination of RNA polymerase I transcription' ObjectSomeValueFrom('regulates' 'termination of RNA polymerase I transcription')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0002136 label: wobble base lysidine biosynthesis - SubClassOf('wobble base lysidine biosynthesis' 'tRNA wobble cytosine modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045899 label: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly - SubClassOf('positive regulation of RNA polymerase II transcriptional preinitiation complex assembly' 'regulation of RNA polymerase II transcriptional preinitiation complex assembly') - SubClassOf('positive regulation of RNA polymerase II transcriptional preinitiation complex assembly' ObjectSomeValueFrom('positively_regulates' 'RNA polymerase II transcriptional preinitiation complex assembly')) - SubClassOf('positive regulation of RNA polymerase II transcriptional preinitiation complex assembly' 'positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of RNA polymerase II transcriptional preinitiation complex assembly' ObjectSomeValueFrom('positively_regulates' 'RNA polymerase II transcriptional preinitiation complex assembly') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_2000144 label: positive regulation of DNA-dependent transcription, initiation - SubClassOf('positive regulation of DNA-dependent transcription, initiation' ObjectSomeValueFrom('positively_regulates' 'DNA-dependent transcription, initiation')) - SubClassOf('positive regulation of DNA-dependent transcription, initiation' 'positive regulation of transcription, DNA-dependent') - SubClassOf('positive regulation of DNA-dependent transcription, initiation' 'regulation of DNA-dependent transcription, initiation') - EquivalentClasses('positive regulation of DNA-dependent transcription, initiation' ObjectSomeValueFrom('positively_regulates' 'DNA-dependent transcription, initiation') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000437 label: carbon catabolite repression of transcription from RNA polymerase II promoter - SubClassOf('carbon catabolite repression of transcription from RNA polymerase II promoter' 'carbon catabolite repression of transcription') - SubClassOf('carbon catabolite repression of transcription from RNA polymerase II promoter' 'carbon catabolite regulation of transcription from RNA polymerase II promoter') - SubClassOf('carbon catabolite repression of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000285 label: LeftVentricle - SubClassOf('LeftVentricle' 'Ventricles') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000454 label: snoRNA guided rRNA pseudouridine synthesis - SubClassOf('snoRNA guided rRNA pseudouridine synthesis' 'rRNA pseudouridine synthesis') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010755 label: regulation of plasminogen activation - EquivalentClasses('regulation of plasminogen activation' ObjectSomeValueFrom('regulates' 'plasminogen activation') ) - SubClassOf('regulation of plasminogen activation' ObjectSomeValueFrom('regulates' 'plasminogen activation')) - SubClassOf('regulation of plasminogen activation' 'regulation of protein processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061392 label: regulation of transcription from RNA polymerase II promoter in response to osmotic stress - SubClassOf('regulation of transcription from RNA polymerase II promoter in response to osmotic stress' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001671 label: bacterial_RNApol_promoter_sigma_70 - SubClassOf('bacterial_RNApol_promoter_sigma_70' 'bacterial_RNApol_promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001086 label: TFIIA-class binding transcription factor activity - SubClassOf('TFIIA-class binding transcription factor activity' 'RNA polymerase II basal transcription factor binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007250 label: activation of NF-kappaB-inducing kinase activity - SubClassOf('activation of NF-kappaB-inducing kinase activity' 'regulation of NIK/NF-kappaB cascade') - SubClassOf('activation of NF-kappaB-inducing kinase activity' ObjectSomeValueFrom('part_of' 'NIK/NF-kappaB cascade')) - SubClassOf('activation of NF-kappaB-inducing kinase activity' ObjectSomeValueFrom('positively_regulates' 'NF-kappaB-inducing kinase activity')) - EquivalentClasses('activation of NF-kappaB-inducing kinase activity' ObjectSomeValueFrom('positively_regulates' 'NF-kappaB-inducing kinase activity') ) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_10226 label: Placozoa - SubClassOf('Placozoa' 'Metazoa') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001029 label: RNA polymerase III type 3 promoter TFIIIB-type transcription factor activity - SubClassOf('RNA polymerase III type 3 promoter TFIIIB-type transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III type 3 promoter transcriptional preinitiation complex assembly')) - SubClassOf('RNA polymerase III type 3 promoter TFIIIB-type transcription factor activity' 'TFIIIB-type transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097447 label: dendritic tree - SubClassOf('dendritic tree' 'neuron part') - SubClassOf('dendritic tree' ObjectSomeValueFrom('has_part' 'dendrite')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033415 label: UGA codon-amino acid adaptor activity - SubClassOf('UGA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_110814 label: Xenoturbellida - SubClassOf('Xenoturbellida' 'Deuterostomia') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000132 label: GeneDeficiencyDisorder - SubClassOf('GeneDeficiencyDisorder' 'GeneticDisease') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044299 label: C-fiber - SubClassOf('C-fiber' 'axon') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_33208 label: Metazoa - SubClassOf('Metazoa' 'Opisthokonta') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002939 label: tRNA N1-guanine methylation - SubClassOf('tRNA N1-guanine methylation' 'tRNA methylation') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_7586 label: Echinodermata - SubClassOf('Echinodermata' 'Deuterostomia') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900096 label: negative regulation of dosage compensation by inactivation of X chromosome - SubClassOf('negative regulation of dosage compensation by inactivation of X chromosome' 'regulation of dosage compensation by inactivation of X chromosome') - SubClassOf('negative regulation of dosage compensation by inactivation of X chromosome' ObjectSomeValueFrom('negatively_regulates' 'dosage compensation by inactivation of X chromosome')) - EquivalentClasses('negative regulation of dosage compensation by inactivation of X chromosome' ObjectSomeValueFrom('negatively_regulates' 'dosage compensation by inactivation of X chromosome') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001140 label: bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription - SubClassOf('bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' 'bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity') - SubClassOf('bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' 'sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035953 label: regulation of dipeptide transport by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of dipeptide transport by regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('regulation of dipeptide transport by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) - SubClassOf('regulation of dipeptide transport by regulation of transcription from RNA polymerase II promoter' 'regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045905 label: positive regulation of translational termination - EquivalentClasses('positive regulation of translational termination' ObjectSomeValueFrom('positively_regulates' 'translational termination') ) - SubClassOf('positive regulation of translational termination' 'positive regulation of translation') - SubClassOf('positive regulation of translational termination' ObjectSomeValueFrom('positively_regulates' 'translational termination')) - SubClassOf('positive regulation of translational termination' 'regulation of translational termination') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070055 label: HAC1-type intron splice site recognition and cleavage - SubClassOf('HAC1-type intron splice site recognition and cleavage' 'RNA processing') - SubClassOf('HAC1-type intron splice site recognition and cleavage' ObjectSomeValueFrom('part_of' 'mRNA splicing, via endonucleolytic cleavage and ligation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_1900391 label: regulation of cAMP-mediated signaling by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of cAMP-mediated signaling by regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('regulation of cAMP-mediated signaling by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of cAMP-mediated signaling by regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0061407 label: positive regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide' 'positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000349 label: generation of catalytic spliceosome for first transesterification step - SubClassOf('generation of catalytic spliceosome for first transesterification step' 'biological_process') - SubClassOf('generation of catalytic spliceosome for first transesterification step' ObjectSomeValueFrom('part_of' 'spliceosomal conformational changes to generate catalytic conformation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033419 label: CUA codon-amino acid adaptor activity - SubClassOf('CUA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901921 label: phosphorylation of RNA polymerase II C-terminal domain involved in recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex - EquivalentClasses('phosphorylation of RNA polymerase II C-terminal domain involved in recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex' ObjectIntersectionOf('phosphorylation of RNA polymerase II C-terminal domain' ObjectSomeValueFrom('part_of' 'recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex')) ) - SubClassOf('phosphorylation of RNA polymerase II C-terminal domain involved in recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex' 'phosphorylation of RNA polymerase II C-terminal domain') - SubClassOf('phosphorylation of RNA polymerase II C-terminal domain involved in recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex' ObjectSomeValueFrom('part_of' 'recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0061410 label: positive regulation of transcription from RNA polymerase II promoter in response to ethanol - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to ethanol' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901191 label: negative regulation of formation of translation initiation ternary complex - SubClassOf('negative regulation of formation of translation initiation ternary complex' ObjectSomeValueFrom('negatively_regulates' 'formation of translation initiation ternary complex')) - SubClassOf('negative regulation of formation of translation initiation ternary complex' 'regulation of formation of translation initiation ternary complex') - EquivalentClasses('negative regulation of formation of translation initiation ternary complex' ObjectSomeValueFrom('negatively_regulates' 'formation of translation initiation ternary complex') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001139 label: core RNA polymerase II recruiting transcription factor activity - SubClassOf('core RNA polymerase II recruiting transcription factor activity' 'core RNA polymerase II binding transcription factor activity') - SubClassOf('core RNA polymerase II recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase II transcriptional preinitiation complex assembly')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0032544 label: plastid translation - EquivalentClasses('translation' 'plastid translation' ) - SubClassOf('plastid translation' 'biological_process') - SubClassOf('plastid translation' 'translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044309 label: neuron spine - SubClassOf('neuron spine' 'neuron projection') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000902 label: transgene - SubClassOf('transgene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097418 label: neurofibrillary tangle - SubClassOf('neurofibrillary tangle' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001897 label: transposable_element_pseudogene - SubClassOf('transposable_element_pseudogene' ObjectSomeValueFrom('part_of' 'transposable_element')) - SubClassOf('transposable_element_pseudogene' 'pseudogene') --- Class Changed: http://purl.org/obo/owl/omit#MOD_00128 label: N6-pyridoxal phosphate-L-lysine - SubClassOf('N6-pyridoxal phosphate-L-lysine' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000815 label: regulation of mRNA stability involved in response to oxidative stress - SubClassOf('regulation of mRNA stability involved in response to oxidative stress' 'biological_process') - SubClassOf('regulation of mRNA stability involved in response to oxidative stress' 'regulation of mRNA stability involved in response to stress') - EquivalentClasses('regulation of mRNA stability' 'regulation of mRNA stability involved in response to oxidative stress' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001212 label: zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription - SubClassOf('zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription' 'zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity') - SubClassOf('zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription' 'metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0085034 label: negative regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade - SubClassOf('negative regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade' 'negative regulation of I-kappaB kinase/NF-kappaB cascade') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000085 label: OtherMiRNA - SubClassOf('OtherMiRNA' 'miRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010216 label: maintenance of DNA methylation - SubClassOf('maintenance of DNA methylation' 'biological_process') - SubClassOf('maintenance of DNA methylation' ObjectSomeValueFrom('part_of' 'DNA methylation')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000262 label: CarotidArtery - SubClassOf('CarotidArtery' 'Artery') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000163 label: Hemangioma - SubClassOf('Hemangioma' 'EpithelialOrigin') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000278 label: Ventricles - SubClassOf('Ventricles' 'Heart') --- Class Changed: http://purl.org/obo/owl/omit#GO_1990031 label: pinceau fiber - SubClassOf('pinceau fiber' 'axon part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033411 label: UAA codon-amino acid adaptor activity - SubClassOf('UAA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033425 label: CAU codon-amino acid adaptor activity - SubClassOf('CAU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039608 label: suppression by virus of host translation initiation factor activity by induction of host protein dephosphorylation - SubClassOf('suppression by virus of host translation initiation factor activity by induction of host protein dephosphorylation' 'suppression by virus of host translation initiation factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000640 label: positive regulation of SREBP signaling pathway - SubClassOf('positive regulation of SREBP signaling pathway' ObjectSomeValueFrom('positively_regulates' 'SREBP signaling pathway')) - EquivalentClasses('positive regulation of SREBP signaling pathway' ObjectSomeValueFrom('positively_regulates' 'SREBP signaling pathway') ) - SubClassOf('positive regulation of SREBP signaling pathway' 'regulation of SREBP signaling pathway') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001033 label: RNA polymerase III type 3 promoter TFIIIB recruiting transcription factor activity - SubClassOf('RNA polymerase III type 3 promoter TFIIIB recruiting transcription factor activity' 'RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity') - SubClassOf('RNA polymerase III type 3 promoter TFIIIB recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III type 3 promoter transcriptional preinitiation complex assembly')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000072 label: Eosinophils - SubClassOf('Eosinophils' 'Granulocyte') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031437 label: regulation of mRNA cleavage - SubClassOf('regulation of mRNA cleavage' 'regulation of mRNA processing') - EquivalentClasses('regulation of mRNA cleavage' ObjectSomeValueFrom('regulates' 'mRNA cleavage') ) - SubClassOf('regulation of mRNA cleavage' ObjectSomeValueFrom('regulates' 'mRNA cleavage')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000373 label: Group II intron splicing - SubClassOf('Group II intron splicing' 'RNA splicing, via transesterification reactions with bulged adenosine as nucleophile') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000159 label: PrimaryCardiacMyxoma - SubClassOf('PrimaryCardiacMyxoma' 'ConnectiveOrigin') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001203 label: zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity - SubClassOf('zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity' 'metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000301 label: GreaterOmentum - SubClassOf('GreaterOmentum' 'DigestiveOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042792 label: rRNA transcription from mitochondrial promoter - SubClassOf('rRNA transcription from mitochondrial promoter' 'transcription from mitochondrial promoter') - SubClassOf('rRNA transcription from mitochondrial promoter' 'rRNA transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070155 label: mitochondrial methionyl-tRNA aminoacylation - EquivalentClasses('methionyl-tRNA aminoacylation' 'mitochondrial methionyl-tRNA aminoacylation' ) - SubClassOf('mitochondrial methionyl-tRNA aminoacylation' 'methionyl-tRNA aminoacylation') - SubClassOf('mitochondrial methionyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001720 label: epigenetically_modified_region - SubClassOf('epigenetically_modified_region' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002183 label: cytoplasmic translational initiation - SubClassOf('cytoplasmic translational initiation' 'translational initiation') - SubClassOf('cytoplasmic translational initiation' ObjectSomeValueFrom('part_of' 'cytoplasmic translation')) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_32524 label: Amniota - SubClassOf('Amniota' 'Tetrapoda') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000245 label: spliceosomal complex assembly - SubClassOf('spliceosomal complex assembly' 'biological_process') - SubClassOf('spliceosomal complex assembly' ObjectSomeValueFrom('part_of' 'mRNA splicing, via spliceosome')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0044627 label: modulation of complement activation, classical pathway in other organism - SubClassOf('modulation of complement activation, classical pathway in other organism' 'regulation of complement activation, classical pathway') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046773 label: suppression by virus of host termination of protein biosynthetic process - SubClassOf('suppression by virus of host termination of protein biosynthetic process' 'negative regulation of translational termination') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006465 label: signal peptide processing - SubClassOf('signal peptide processing' 'protein processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000309 label: Stomach - SubClassOf('Stomach' 'DigestiveOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060568 label: regulation of peptide hormone processing - SubClassOf('regulation of peptide hormone processing' ObjectSomeValueFrom('regulates' 'peptide hormone processing')) - EquivalentClasses('regulation of peptide hormone processing' ObjectSomeValueFrom('regulates' 'peptide hormone processing') ) - SubClassOf('regulation of peptide hormone processing' 'regulation of protein processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045014 label: negative regulation of transcription by glucose - SubClassOf('negative regulation of transcription by glucose' 'regulation of transcription by glucose') - SubClassOf('negative regulation of transcription by glucose' 'carbon catabolite repression of transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0003269 label: BMP signaling pathway involved in regulation of secondary heart field cardioblast proliferation - SubClassOf('BMP signaling pathway involved in regulation of secondary heart field cardioblast proliferation' 'BMP signaling pathway involved in heart development') - SubClassOf('BMP signaling pathway involved in regulation of secondary heart field cardioblast proliferation' 'biological_process') - EquivalentClasses('BMP signaling pathway involved in regulation of secondary heart field cardioblast proliferation' 'BMP signaling pathway involved in heart development' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0060734 label: regulation of eIF2 alpha phosphorylation by endoplasmic reticulum stress - SubClassOf('regulation of eIF2 alpha phosphorylation by endoplasmic reticulum stress' ObjectSomeValueFrom('regulates' 'regulation of translational initiation by eIF2 alpha phosphorylation')) - SubClassOf('regulation of eIF2 alpha phosphorylation by endoplasmic reticulum stress' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070919 label: production of siRNA involved in chromatin silencing by small RNA - SubClassOf('production of siRNA involved in chromatin silencing by small RNA' ObjectSomeValueFrom('part_of' 'chromatin silencing by small RNA')) - SubClassOf('production of siRNA involved in chromatin silencing by small RNA' 'production of small RNA involved in gene silencing by RNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901259 label: chloroplast rRNA processing - SubClassOf('chloroplast rRNA processing' 'biological_process') - SubClassOf('chloroplast rRNA processing' 'rRNA processing') - EquivalentClasses('rRNA processing' 'chloroplast rRNA processing' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0010678 label: negative regulation of cellular carbohydrate metabolic process by negative regulation of transcription, DNA-dependent - EquivalentClasses('negative regulation of cellular carbohydrate metabolic process by negative regulation of transcription, DNA-dependent' ObjectSomeValueFrom('negatively_regulates' 'transcription, DNA-dependent') ) - SubClassOf('negative regulation of cellular carbohydrate metabolic process by negative regulation of transcription, DNA-dependent' 'negative regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000354 label: Cervix - SubClassOf('Cervix' 'FemaleReproductiveSystem') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046019 label: regulation of transcription from RNA polymerase II promoter by pheromones - SubClassOf('regulation of transcription from RNA polymerase II promoter by pheromones' 'regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of transcription from RNA polymerase II promoter by pheromones' 'regulation of transcription by pheromones') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000482 label: Archaea - SubClassOf('Archaea' 'CellularOrganism') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001040 label: RNA polymerase III hybrid type promoter TFIIIB-type transcription factor activity - SubClassOf('RNA polymerase III hybrid type promoter TFIIIB-type transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III hybrid type promoter transcriptional preinitiation complex assembly')) - SubClassOf('RNA polymerase III hybrid type promoter TFIIIB-type transcription factor activity' 'TFIIIB-type transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_556282 label: Jakobida - SubClassOf('Jakobida' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000448 label: cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - SubClassOf('cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)') - SubClassOf('cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) - SubClassOf('cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0061416 label: regulation of transcription from RNA polymerase II promoter in response to salt stress - SubClassOf('regulation of transcription from RNA polymerase II promoter in response to salt stress' 'regulation of transcription from RNA polymerase II promoter in response to osmotic stress') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000054 label: ConnectiveTissueCell - SubClassOf('ConnectiveTissueCell' 'cell') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042346 label: positive regulation of NF-kappaB import into nucleus - SubClassOf('positive regulation of NF-kappaB import into nucleus' 'regulation of NF-kappaB import into nucleus') - EquivalentClasses('positive regulation of NF-kappaB import into nucleus' ObjectSomeValueFrom('positively_regulates' 'NF-kappaB import into nucleus') ) - SubClassOf('positive regulation of NF-kappaB import into nucleus' ObjectSomeValueFrom('positively_regulates' 'NF-kappaB import into nucleus')) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_311790 label: Afrotheria - SubClassOf('Afrotheria' 'Eutheria') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006357 label: regulation of transcription from RNA polymerase II promoter - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of thiamine biosynthetic process by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in somitogenesis' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of 4,6-pyruvylated galactose residue biosynthetic process by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in posterior neural plate formation' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of fungal-type cell wall biogenesis by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription, DNA-dependent') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in heart development' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in spinal cord anterior-posterior patterning' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in venous endothelial cell fate commitment' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in detection of glucose' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of cytokinetic cell separation by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of histone acetylation by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in lymphatic endothelial cell fate commitment' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of iron ion import by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in primary germ layer cell fate commitment' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter involved in endocardial precursor cell differentiation' 'regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in eye field cell fate commitment of camera-type eye' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter, mitotic' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of dipeptide transmembrane transport by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation' 'regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of meiosis by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter')) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'positive regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in kidney development' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of histone modification by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in cell fate commitment' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of cellular response to oxidative stress by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'negative regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of cAMP-mediated signaling by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in spermatogenesis' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in metanephros development' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in mammary gland formation' ) - EquivalentClasses('regulation of transcription involved in G1/S transition of mitotic cell cycle' 'regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of histone methylation by regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in anterior neural plate formation' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in mesonephros development' ) - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of glucose import by regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000229 label: AnalgesicTreatment - SubClassOf('AnalgesicTreatment' 'PharmaceuticalTreatment') --- Class Changed: http://purl.org/obo/owl/omit#GO_1902375 label: nuclear tRNA 3'-trailer cleavage, endonucleolytic - EquivalentClasses('tRNA 3'-trailer cleavage, endonucleolytic' 'nuclear tRNA 3'-trailer cleavage, endonucleolytic' ) - SubClassOf('nuclear tRNA 3'-trailer cleavage, endonucleolytic' 'tRNA 3'-trailer cleavage, endonucleolytic') - SubClassOf('nuclear tRNA 3'-trailer cleavage, endonucleolytic' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033458 label: GAC codon-amino acid adaptor activity - SubClassOf('GAC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000156 label: PapillaryFibroelastoma - SubClassOf('PapillaryFibroelastoma' 'ConnectiveOrigin') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000350 label: CranialNerves - SubClassOf('CranialNerves' 'PeripheralNerves') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000108 label: CardiacMuscle - SubClassOf('CardiacMuscle' 'MuscleTissue') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000188 label: PrecursorBCellAcuteLymphoblasticLeukemiaLymphoma - SubClassOf('PrecursorBCellAcuteLymphoblasticLeukemiaLymphoma' 'ImmatureBOrTCellNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_1902010 label: negative regulation of translation involved in response to endoplasmic reticulum stress - EquivalentClasses('negative regulation of translation' 'negative regulation of translation involved in response to endoplasmic reticulum stress' ) - SubClassOf('negative regulation of translation involved in response to endoplasmic reticulum stress' 'biological_process') - SubClassOf('negative regulation of translation involved in response to endoplasmic reticulum stress' 'negative regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070321 label: regulation of translation in response to nitrogen starvation - SubClassOf('regulation of translation in response to nitrogen starvation' 'regulation of translation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_33682 label: Euglenozoa - SubClassOf('Euglenozoa' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043685 label: conversion of glutamyl-tRNA to glutaminyl-tRNA - SubClassOf('conversion of glutamyl-tRNA to glutaminyl-tRNA' 'charged-tRNA amino acid modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044632 label: negative regulation of complement activation, lectin pathway in other organism - SubClassOf('negative regulation of complement activation, lectin pathway in other organism' 'negative regulation of complement activation, lectin pathway') - SubClassOf('negative regulation of complement activation, lectin pathway in other organism' 'modulation of complement activation, lectin pathway in other organism') --- Class Changed: http://purl.org/obo/owl/omit#GO_0080120 label: CAAX-box protein maturation - SubClassOf('CAAX-box protein maturation' ObjectSomeValueFrom('has_part' 'protein processing')) - SubClassOf('CAAX-box protein maturation' 'protein maturation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002097 label: tRNA wobble base modification - SubClassOf('tRNA wobble base modification' 'tRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007221 label: positive regulation of transcription of Notch receptor target - SubClassOf('positive regulation of transcription of Notch receptor target' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000075 label: Neuron - SubClassOf('Neuron' 'NerveTissueCell') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000429 label: carbon catabolite regulation of transcription from RNA polymerase II promoter - SubClassOf('carbon catabolite regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - SubClassOf('carbon catabolite regulation of transcription from RNA polymerase II promoter' 'carbon catabolite regulation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000076 label: MacroglialCell - SubClassOf('MacroglialCell' 'GlialCell') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001868 label: positional_candidate_gene - SubClassOf('positional_candidate_gene' 'candidate_gene') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_0000414 label: Dipnotetrapodomorpha - SubClassOf('Dipnotetrapodomorpha' 'Sarcopterygii') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016427 label: tRNA (cytosine) methyltransferase activity - SubClassOf('tRNA (cytosine) methyltransferase activity' 'tRNA methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032584 label: growth cone membrane - SubClassOf('growth cone membrane' ObjectSomeValueFrom('part_of' 'growth cone')) - SubClassOf('growth cone membrane' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0038061 label: NIK/NF-kappaB cascade - SubClassOf('NIK/NF-kappaB cascade' 'biological_process') - SubClassOf('NIK/NF-kappaB cascade' ObjectSomeValueFrom('has_part' 'positive regulation of NF-kappaB transcription factor activity')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0010608 label: posttranscriptional regulation of gene expression - SubClassOf('posttranscriptional regulation of gene expression' 'regulation of gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_1990038 label: Lewy body corona - SubClassOf('Lewy body corona' 'neuron part') - SubClassOf('Lewy body corona' ObjectSomeValueFrom('part_of' 'Lewy body')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000318 label: Thyroid - SubClassOf('Thyroid' 'EndocrineOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044308 label: axonal spine - SubClassOf('axonal spine' 'neuron spine') - SubClassOf('axonal spine' 'axon part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006360 label: transcription from RNA polymerase I promoter - SubClassOf('transcription from RNA polymerase I promoter' 'transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036415 label: regulation of tRNA stability - SubClassOf('regulation of tRNA stability' 'regulation of RNA stability') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900018 label: phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex - EquivalentClasses('phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex' ObjectIntersectionOf('phosphorylation of RNA polymerase II C-terminal domain serine 5 residues' ObjectSomeValueFrom('part_of' 'recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex')) ) - SubClassOf('phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex' ObjectSomeValueFrom('part_of' 'recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex')) - SubClassOf('phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex' 'phosphorylation of RNA polymerase II C-terminal domain serine 5 residues') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000474 label: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) - SubClassOf('maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' 'maturation of SSU-rRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039594 label: endoribonuclease activity involved in viral induction of host mRNA catabolic process - SubClassOf('endoribonuclease activity involved in viral induction of host mRNA catabolic process' ObjectSomeValueFrom('part_of' 'cleavage by virus of host mRNA')) - SubClassOf('endoribonuclease activity involved in viral induction of host mRNA catabolic process' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000464 label: endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - SubClassOf('endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)') - SubClassOf('endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) - SubClassOf('endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0043198 label: dendritic shaft - SubClassOf('dendritic shaft' 'neuron part') - SubClassOf('dendritic shaft' ObjectSomeValueFrom('part_of' 'dendrite')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0010467 label: gene expression - EquivalentClasses('gene expression' 'gene expression involved in extracellular matrix organization' ) - SubClassOf('gene expression' 'macromolecule metabolic process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000398 label: mRNA splicing, via spliceosome - SubClassOf('mRNA splicing, via spliceosome' 'RNA splicing, via transesterification reactions with bulged adenosine as nucleophile') - SubClassOf('mRNA splicing, via spliceosome' 'mRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000627 label: insulator - SubClassOf('insulator' 'transcriptional_cis_regulatory_region') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000162 label: SplenicOsteoma - SubClassOf('SplenicOsteoma' 'ConnectiveOrigin') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000459 label: gene_with_trans_spliced_transcript - SubClassOf('gene_with_trans_spliced_transcript' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000388 label: spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) - SubClassOf('spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)' ObjectSomeValueFrom('part_of' 'spliceosomal conformational changes to generate catalytic conformation')) - SubClassOf('spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901644 label: positive regulation of tRNA methylation in response to nitrogen starvation - SubClassOf('positive regulation of tRNA methylation in response to nitrogen starvation' ObjectSomeValueFrom('positively_regulates' 'tRNA methylation in response to nitrogen starvation')) - SubClassOf('positive regulation of tRNA methylation in response to nitrogen starvation' 'regulation of tRNA methylation in response to nitrogen starvation') - SubClassOf('positive regulation of tRNA methylation in response to nitrogen starvation' 'positive regulation of tRNA processing') - EquivalentClasses('positive regulation of tRNA methylation in response to nitrogen starvation' ObjectSomeValueFrom('positively_regulates' 'tRNA methylation in response to nitrogen starvation') ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000343 label: Midbrain - SubClassOf('Midbrain' 'Brain') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002940 label: tRNA N2-guanine methylation - SubClassOf('tRNA N2-guanine methylation' 'tRNA methylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033433 label: AUU codon-amino acid adaptor activity - SubClassOf('AUU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043555 label: regulation of translation in response to stress - SubClassOf('regulation of translation in response to stress' 'regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060570 label: negative regulation of peptide hormone processing - SubClassOf('negative regulation of peptide hormone processing' 'regulation of peptide hormone processing') - SubClassOf('negative regulation of peptide hormone processing' ObjectSomeValueFrom('negatively_regulates' 'peptide hormone processing')) - SubClassOf('negative regulation of peptide hormone processing' 'negative regulation of protein processing') - EquivalentClasses('negative regulation of peptide hormone processing' ObjectSomeValueFrom('negatively_regulates' 'peptide hormone processing') ) --- Class Changed: http://purl.org/obo/owl/omit#SO_0001055 label: transcriptional_cis_regulatory_region - SubClassOf('transcriptional_cis_regulatory_region' 'transcription_regulatory_region') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000667 label: insertion - SubClassOf('insertion' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_9443 label: Primates - SubClassOf('Primates' 'Euarchontoglires') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045945 label: positive regulation of transcription from RNA polymerase III promoter - EquivalentClasses('positive regulation of transcription from RNA polymerase III promoter' 'positive regulation of transcription from RNA polymerase III promoter during mitosis' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase III promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase III promoter') ) - SubClassOf('positive regulation of transcription from RNA polymerase III promoter' 'positive regulation of transcription, DNA-dependent') - SubClassOf('positive regulation of transcription from RNA polymerase III promoter' 'regulation of transcription from RNA polymerase III promoter') - SubClassOf('positive regulation of transcription from RNA polymerase III promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase III promoter')) --- Class Changed: http://purl.org/obo/owl/omit#CHEBI_33708 label: amino-acid residue - SubClassOf('amino-acid residue' 'fiat object') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002190 label: cap-independent translational initiation - SubClassOf('cap-independent translational initiation' 'cytoplasmic translational initiation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043907 label: Cys-tRNA(Pro) hydrolase activity - SubClassOf('Cys-tRNA(Pro) hydrolase activity' 'aminoacyl-tRNA editing activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000839 label: polypeptide_region - SubClassOf('polypeptide_region' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_1990145 label: maintenance of translational fidelity - SubClassOf('maintenance of translational fidelity' 'biological_process') - SubClassOf('maintenance of translational fidelity' ObjectSomeValueFrom('part_of' 'translation')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000214 label: PulmonaryLargeCellCarcinoma - SubClassOf('PulmonaryLargeCellCarcinoma' 'Carcinoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001170 label: RNA polymerase I enhancer sequence-specific DNA binding transcription factor activity - SubClassOf('RNA polymerase I enhancer sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding RNA polymerase I transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001078 label: RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription - SubClassOf('RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' 'RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity') - SubClassOf('RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' 'RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061312 label: BMP signaling pathway involved in heart development - SubClassOf('BMP signaling pathway involved in heart development' 'BMP signaling pathway') - SubClassOf('BMP signaling pathway involved in heart development' 'regulation of transcription from RNA polymerase II promoter involved in heart development') - EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in heart development' ) - EquivalentClasses('BMP signaling pathway involved in regulation of secondary heart field cardioblast proliferation' 'BMP signaling pathway involved in heart development' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033446 label: AGC codon-amino acid adaptor activity - SubClassOf('AGC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044528 label: regulation of mitochondrial mRNA stability - SubClassOf('regulation of mitochondrial mRNA stability' 'regulation of mRNA stability') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006398 label: histone mRNA 3'-end processing - SubClassOf('histone mRNA 3'-end processing' 'mRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070150 label: mitochondrial glycyl-tRNA aminoacylation - EquivalentClasses('glycyl-tRNA aminoacylation' 'mitochondrial glycyl-tRNA aminoacylation' ) - SubClassOf('mitochondrial glycyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') - SubClassOf('mitochondrial glycyl-tRNA aminoacylation' 'glycyl-tRNA aminoacylation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000370 label: Trachea - SubClassOf('Trachea' 'LowerRespiratoryTract') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001074 label: RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly - SubClassOf('RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'RNA polymerase II transcriptional preinitiation complex assembly')) - SubClassOf('RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly' 'RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034415 label: tRNA 3'-trailer cleavage, exonucleolytic - SubClassOf('tRNA 3'-trailer cleavage, exonucleolytic' 'tRNA 3'-trailer cleavage') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000991 label: core RNA polymerase II binding transcription factor activity - SubClassOf('core RNA polymerase II binding transcription factor activity' 'biological_process') - SubClassOf('core RNA polymerase II binding transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0038004 label: epidermal growth factor receptor ligand maturation - SubClassOf('epidermal growth factor receptor ligand maturation' 'protein maturation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031442 label: positive regulation of mRNA 3'-end processing - SubClassOf('positive regulation of mRNA 3'-end processing' 'positive regulation of mRNA processing') - SubClassOf('positive regulation of mRNA 3'-end processing' ObjectSomeValueFrom('positively_regulates' 'mRNA 3'-end processing')) - EquivalentClasses('positive regulation of mRNA 3'-end processing' ObjectSomeValueFrom('positively_regulates' 'mRNA 3'-end processing') ) - SubClassOf('positive regulation of mRNA 3'-end processing' 'regulation of mRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_10213 label: Mesozoa - SubClassOf('Mesozoa' 'Metazoa') --- Class Changed: http://purl.org/obo/owl/omit#PR_000021935 label: immature protein part - SubClassOf('immature protein part' 'fiat object') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033407 label: UCA codon-amino acid adaptor activity - SubClassOf('UCA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000372 label: Group I intron splicing - SubClassOf('Group I intron splicing' 'RNA splicing, via transesterification reactions with guanosine as nucleophile') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033460 label: GAG codon-amino acid adaptor activity - SubClassOf('GAG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900476 label: positive regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('positive regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter' 'regulation of meiosis by regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001213 label: metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription - SubClassOf('metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription' 'RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription') - SubClassOf('metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription' 'metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070127 label: tRNA aminoacylation for mitochondrial protein translation - SubClassOf('tRNA aminoacylation for mitochondrial protein translation' 'tRNA aminoacylation for protein translation') - SubClassOf('tRNA aminoacylation for mitochondrial protein translation' ObjectSomeValueFrom('part_of' 'mitochondrial translation')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000371 label: Larynx - SubClassOf('Larynx' 'UpperRespiratoryTract') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006615 label: SRP-dependent cotranslational protein targeting to membrane, docking - SubClassOf('SRP-dependent cotranslational protein targeting to membrane, docking' ObjectSomeValueFrom('part_of' 'SRP-dependent cotranslational protein targeting to membrane')) - SubClassOf('SRP-dependent cotranslational protein targeting to membrane, docking' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001062 label: plastid PEP-A RNA polymerase activity - SubClassOf('plastid PEP-A RNA polymerase activity' ObjectSomeValueFrom('part_of' 'transcription from plastid promoter')) - SubClassOf('plastid PEP-A RNA polymerase activity' 'bacterial-type RNA polymerase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039573 label: suppression by virus of host complement activation - SubClassOf('suppression by virus of host complement activation' 'negative regulation of complement activation') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001206 label: T3_RNA_Polymerase_Promoter - SubClassOf('T3_RNA_Polymerase_Promoter' 'Phage_RNA_Polymerase_Promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030371 label: translation repressor activity - SubClassOf('translation repressor activity' ObjectSomeValueFrom('part_of' 'negative regulation of translation')) - SubClassOf('translation repressor activity' 'translation regulator activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_1990180 label: mitochondrial tRNA 3'-end processing - SubClassOf('mitochondrial tRNA 3'-end processing' 'mitochondrial RNA 3'-end processing') - SubClassOf('mitochondrial tRNA 3'-end processing' 'tRNA 3'-end processing') - EquivalentClasses('tRNA 3'-end processing' 'mitochondrial tRNA 3'-end processing' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0090115 label: C-5 methylation on cytosine involved in chromatin silencing - SubClassOf('C-5 methylation on cytosine involved in chromatin silencing' 'C-5 methylation of cytosine') - SubClassOf('C-5 methylation on cytosine involved in chromatin silencing' ObjectSomeValueFrom('part_of' 'methylation-dependent chromatin silencing')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0038052 label: estrogen-activated sequence-specific DNA binding RNA polymerase II transcription factor activity - SubClassOf('estrogen-activated sequence-specific DNA binding RNA polymerase II transcription factor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061421 label: positive regulation of transcription by oleic acid - SubClassOf('positive regulation of transcription by oleic acid' 'carbon catabolite activation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007360 label: positive regulation of posterior gap gene transcription - SubClassOf('positive regulation of posterior gap gene transcription' 'regulation of transcription involved in anterior/posterior axis specification') - SubClassOf('positive regulation of posterior gap gene transcription' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001169 label: RNA polymerase I CORE element sequence-specific DNA binding transcription factor activity - SubClassOf('RNA polymerase I CORE element sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding RNA polymerase I transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000803 label: TEInsertion - SubClassOf('TEInsertion' 'insertion') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061400 label: positive regulation of transcription from RNA polymerase II promoter in response to calcium ion - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to calcium ion' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0021909 label: regulation of transcription from RNA polymerase II promoter involved in spinal cord anterior-posterior patterning - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in spinal cord anterior-posterior patterning' 'biological_process') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in spinal cord anterior-posterior patterning' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in spinal cord anterior-posterior patterning' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0051037 label: regulation of transcription during meiosis - SubClassOf('regulation of transcription during meiosis' 'biological_process') - EquivalentClasses('regulation of transcription, DNA-dependent' 'regulation of transcription during meiosis' ) - SubClassOf('regulation of transcription during meiosis' 'regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031054 label: pre-miRNA processing - SubClassOf('pre-miRNA processing' 'ncRNA processing') - SubClassOf('pre-miRNA processing' ObjectSomeValueFrom('part_of' 'production of miRNAs involved in gene silencing by miRNA')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0043203 label: axon hillock - SubClassOf('axon hillock' ObjectSomeValueFrom('part_of' 'neuronal cell body')) - SubClassOf('axon hillock' 'axon part') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900545 label: regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039653 label: suppression by virus of host transcription - SubClassOf('suppression by virus of host transcription' 'modulation by virus of host transcription') - SubClassOf('suppression by virus of host transcription' 'suppression by virus of host gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901582 label: positive regulation of telomeric RNA transcription from RNA pol II promoter - EquivalentClasses('positive regulation of telomeric RNA transcription from RNA pol II promoter' ObjectSomeValueFrom('positively_regulates' 'telomeric RNA transcription from RNA pol II promoter') ) - SubClassOf('positive regulation of telomeric RNA transcription from RNA pol II promoter' 'regulation of telomeric RNA transcription from RNA pol II promoter') - SubClassOf('positive regulation of telomeric RNA transcription from RNA pol II promoter' 'positive regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of telomeric RNA transcription from RNA pol II promoter' ObjectSomeValueFrom('positively_regulates' 'telomeric RNA transcription from RNA pol II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#PR_000025513 label: modified amino-acid residue - SubClassOf('modified amino-acid residue' 'amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0008293 label: torso signaling pathway - SubClassOf('torso signaling pathway' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016180 label: snRNA processing - SubClassOf('snRNA processing' 'ncRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000485 label: cleavage between 2S rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) - SubClassOf('cleavage between 2S rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)') - SubClassOf('cleavage between 2S rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)')) - SubClassOf('cleavage between 2S rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 2S rRNA')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000453 label: enzyme-directed rRNA 2'-O-methylation - SubClassOf('enzyme-directed rRNA 2'-O-methylation' 'rRNA 2'-O-methylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006450 label: regulation of translational fidelity - SubClassOf('regulation of translational fidelity' 'regulation of translational elongation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071036 label: nuclear polyadenylation-dependent snoRNA catabolic process - SubClassOf('nuclear polyadenylation-dependent snoRNA catabolic process' 'nuclear polyadenylation-dependent ncRNA catabolic process') - SubClassOf('nuclear polyadenylation-dependent snoRNA catabolic process' ObjectSomeValueFrom('has_part' 'snoRNA polyadenylation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0045996 label: negative regulation of transcription by pheromones - SubClassOf('negative regulation of transcription by pheromones' 'regulation of transcription by pheromones') - SubClassOf('negative regulation of transcription by pheromones' 'negative regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900478 label: positive regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('positive regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0061394 label: regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance - SubClassOf('regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000871 label: polyadenylated_mRNA - SubClassOf('polyadenylated_mRNA' 'mRNA') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000257 label: Heart - SubClassOf('Heart' 'CardiovascularFeature') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000394 label: RNA splicing, via endonucleolytic cleavage and ligation - SubClassOf('RNA splicing, via endonucleolytic cleavage and ligation' 'RNA splicing') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_33858 label: environmental samples - SubClassOf('environmental samples' 'Bilateria') - SubClassOf('environmental samples' 'Opisthokonta') - SubClassOf('environmental samples' 'Eukaryota') - SubClassOf('environmental samples' 'Chordata') - SubClassOf('environmental samples' 'Metazoa') - SubClassOf('environmental samples' 'Mammalia') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000175 label: ChronicMyelogenousLeukemia - SubClassOf('ChronicMyelogenousLeukemia' 'ChronicMyeloproliferativeDisorders') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000040 label: HarmfulRole - SubClassOf('HarmfulRole' 'role') - SubClassOf('HarmfulRole' ObjectSomeValueFrom('causes' 'Disease')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000388 label: RRE_RNA - SubClassOf('RRE_RNA' 'small_regulatory_ncRNA') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000245 label: CardiovascularFeature - SubClassOf('CardiovascularFeature' 'AnatomicFeature') --- Class Changed: http://purl.org/obo/owl/omit#GO_0050684 label: regulation of mRNA processing - EquivalentClasses('regulation of mRNA processing' ObjectSomeValueFrom('regulates' 'mRNA processing') ) - SubClassOf('regulation of mRNA processing' ObjectSomeValueFrom('regulates' 'mRNA processing')) - SubClassOf('regulation of mRNA processing' 'regulation of gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034414 label: tRNA 3'-trailer cleavage, endonucleolytic - EquivalentClasses('tRNA 3'-trailer cleavage, endonucleolytic' 'mitochondrial tRNA 3'-trailer cleavage, endonucleolytic' ) - SubClassOf('tRNA 3'-trailer cleavage, endonucleolytic' 'tRNA 3'-trailer cleavage') - EquivalentClasses('tRNA 3'-trailer cleavage, endonucleolytic' 'nuclear tRNA 3'-trailer cleavage, endonucleolytic' ) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000610 label: polyA_sequence - SubClassOf('polyA_sequence' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007468 label: regulation of rhodopsin gene expression - SubClassOf('regulation of rhodopsin gene expression' 'regulation of gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001126 label: bacterial-type RNA polymerase preinitiation complex assembly - SubClassOf('bacterial-type RNA polymerase preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'transcription initiation from bacterial-type RNA polymerase promoter')) - SubClassOf('bacterial-type RNA polymerase preinitiation complex assembly' 'DNA-dependent transcriptional preinitiation complex assembly') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000032 label: NormalPressure - SubClassOf('NormalPressure' 'Pressure') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001004 label: RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity - SubClassOf('RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity' 'sequence-specific DNA binding RNA polymerase III transcription factor activity') - SubClassOf('RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity' 'sequence-specific DNA binding transcription factor recruiting transcription factor activity') - SubClassOf('RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity' 'RNA polymerase III transcription factor recruiting transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900547 label: negative regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter - SubClassOf('negative regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('negative regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' 'regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'negative regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0071050 label: snoRNA polyadenylation - SubClassOf('snoRNA polyadenylation' 'ncRNA polyadenylation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000337 label: PeripheralNervousSystem - SubClassOf('PeripheralNervousSystem' 'NervousOrgan') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000365 label: Diaphragm - SubClassOf('Diaphragm' 'RespiratoryOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046779 label: suppression by virus of expression of host genes with introns - SubClassOf('suppression by virus of expression of host genes with introns' 'suppression by virus of host transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000452 label: snoRNA guided rRNA 2'-O-methylation - SubClassOf('snoRNA guided rRNA 2'-O-methylation' 'rRNA 2'-O-methylation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000212 label: PulmonaryAdenosquamousCarcinoma - SubClassOf('PulmonaryAdenosquamousCarcinoma' 'Carcinoma') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000889 label: paternally_imprinted_gene - SubClassOf('paternally_imprinted_gene' 'epigenetically_modified_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046024 label: positive regulation of transcription from RNA polymerase III promoter during mitosis - EquivalentClasses('positive regulation of transcription from RNA polymerase III promoter' 'positive regulation of transcription from RNA polymerase III promoter during mitosis' ) - SubClassOf('positive regulation of transcription from RNA polymerase III promoter during mitosis' 'positive regulation of transcription from RNA polymerase III promoter') - SubClassOf('positive regulation of transcription from RNA polymerase III promoter during mitosis' 'positive regulation of transcription during mitosis') - SubClassOf('positive regulation of transcription from RNA polymerase III promoter during mitosis' 'regulation of transcription from RNA polymerase III promoter, mitotic') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001083 label: RNA polymerase II basal transcription factor binding transcription factor activity - SubClassOf('RNA polymerase II basal transcription factor binding transcription factor activity' 'RNA polymerase II transcription factor binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044639 label: envenomation resulting in modulation of complement activation, lectin pathway in other organism - SubClassOf('envenomation resulting in modulation of complement activation, lectin pathway in other organism' 'biological_process') - SubClassOf('envenomation resulting in modulation of complement activation, lectin pathway in other organism' ObjectSomeValueFrom('has_part' 'modulation of complement activation, lectin pathway in other organism')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0010767 label: regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage - SubClassOf('regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000119 label: TumorCellDeath - SubClassOf('TumorCellDeath' 'PathologicalEvent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000393 label: spliceosomal conformational changes to generate catalytic conformation - SubClassOf('spliceosomal conformational changes to generate catalytic conformation' ObjectSomeValueFrom('part_of' 'mRNA splicing, via spliceosome')) - SubClassOf('spliceosomal conformational changes to generate catalytic conformation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001205 label: RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription - SubClassOf('RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' 'RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity') - SubClassOf('RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' 'RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035582 label: sequestering of BMP in extracellular matrix - SubClassOf('sequestering of BMP in extracellular matrix' 'negative regulation of BMP signaling pathway') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000171 label: RNApol_III_promoter - SubClassOf('RNApol_III_promoter' 'RNA_polymerase_promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060597 label: regulation of transcription from RNA polymerase II promoter involved in mammary gland formation - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in mammary gland formation' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in mammary gland formation' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in mammary gland formation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039656 label: modulation by virus of host gene expression - SubClassOf('modulation by virus of host gene expression' 'regulation of gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006438 label: valyl-tRNA aminoacylation - EquivalentClasses('valyl-tRNA aminoacylation' 'mitochondrial valyl-tRNA aminoacylation' ) - EquivalentClasses('valyl-tRNA aminoacylation' 'cytosolic valyl-tRNA aminoacylation' ) - SubClassOf('valyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043629 label: ncRNA polyadenylation - SubClassOf('ncRNA polyadenylation' 'RNA polyadenylation') - SubClassOf('ncRNA polyadenylation' 'ncRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000339 label: SpinalCord - SubClassOf('SpinalCord' 'CentralNervousSystem') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000982 label: RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity - SubClassOf('RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0052906 label: tRNA (guanine(37)-N(1))-methyltransferase activity - SubClassOf('tRNA (guanine(37)-N(1))-methyltransferase activity' 'tRNA (guanine-N1-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002099 label: tRNA wobble guanine modification - SubClassOf('tRNA wobble guanine modification' 'tRNA wobble base modification') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000673 label: transcript - SubClassOf('transcript' 'gene_member_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033168 label: conversion of ds siRNA to ss siRNA involved in RNA interference - EquivalentClasses('conversion of ds siRNA to ss siRNA involved in RNA interference' ObjectIntersectionOf('conversion of ds siRNA to ss siRNA' ObjectSomeValueFrom('part_of' 'RNA interference')) ) - SubClassOf('conversion of ds siRNA to ss siRNA involved in RNA interference' ObjectSomeValueFrom('part_of' 'production of siRNA involved in RNA interference')) - SubClassOf('conversion of ds siRNA to ss siRNA involved in RNA interference' 'conversion of ds siRNA to ss siRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045291 label: mRNA trans splicing, SL addition - SubClassOf('mRNA trans splicing, SL addition' 'mRNA trans splicing, via spliceosome') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901535 label: regulation of DNA demethylation - SubClassOf('regulation of DNA demethylation' ObjectSomeValueFrom('regulates' 'DNA demethylation')) - EquivalentClasses('regulation of DNA demethylation' ObjectSomeValueFrom('regulates' 'DNA demethylation') ) - SubClassOf('regulation of DNA demethylation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035957 label: positive regulation of starch catabolic process by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of starch catabolic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of starch catabolic process by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) - SubClassOf('positive regulation of starch catabolic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of starch catabolic process by regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0038168 label: epidermal growth factor receptor signaling pathway via I-kappaB kinase/NF-kappaB cascade - SubClassOf('epidermal growth factor receptor signaling pathway via I-kappaB kinase/NF-kappaB cascade' 'epidermal growth factor receptor signaling pathway via positive regulation of NF-kappaB transcription factor activity') - SubClassOf('epidermal growth factor receptor signaling pathway via I-kappaB kinase/NF-kappaB cascade' ObjectSomeValueFrom('has_part' 'I-kappaB kinase/NF-kappaB cascade')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0061418 label: regulation of transcription from RNA polymerase II promoter in response to hypoxia - SubClassOf('regulation of transcription from RNA polymerase II promoter in response to hypoxia' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000495 label: box H/ACA snoRNA 3'-end processing - SubClassOf('box H/ACA snoRNA 3'-end processing' 'box H/ACA snoRNA processing') - SubClassOf('box H/ACA snoRNA 3'-end processing' 'snoRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_3027 label: Cryptophyta - SubClassOf('Cryptophyta' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900418 label: positive regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('positive regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031441 label: negative regulation of mRNA 3'-end processing - SubClassOf('negative regulation of mRNA 3'-end processing' ObjectSomeValueFrom('negatively_regulates' 'mRNA 3'-end processing')) - EquivalentClasses('negative regulation of mRNA 3'-end processing' ObjectSomeValueFrom('negatively_regulates' 'mRNA 3'-end processing') ) - SubClassOf('negative regulation of mRNA 3'-end processing' 'regulation of mRNA 3'-end processing') - SubClassOf('negative regulation of mRNA 3'-end processing' 'negative regulation of mRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001732 label: formation of translation initiation complex - SubClassOf('formation of translation initiation complex' 'biological_process') - SubClassOf('formation of translation initiation complex' ObjectSomeValueFrom('part_of' 'translational initiation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0002131 label: wobble position cytosine ribose methylation - SubClassOf('wobble position cytosine ribose methylation' 'wobble position ribose methylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044726 label: protection of DNA demethylation of female pronucleus - SubClassOf('protection of DNA demethylation of female pronucleus' ObjectSomeValueFrom('part_of' 'chromatin reprogramming in the zygote')) - SubClassOf('protection of DNA demethylation of female pronucleus' 'regulation of DNA methylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043145 label: snoRNA 3'-end cleavage - SubClassOf('snoRNA 3'-end cleavage' 'snoRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_0000408 label: UnclassifiedMammalia - SubClassOf('UnclassifiedMammalia' 'Mammalia') --- Class Changed: http://purl.org/obo/owl/omit#GO_0009452 label: 7-methylguanosine RNA capping - SubClassOf('7-methylguanosine RNA capping' 'RNA capping') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900402 label: regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0021918 label: regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment' 'regulation of transcription involved in cell fate commitment') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0072364 label: regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_2000824 label: negative regulation of androgen receptor activity - SubClassOf('negative regulation of androgen receptor activity' 'negative regulation of sequence-specific DNA binding transcription factor activity') - SubClassOf('negative regulation of androgen receptor activity' 'regulation of androgen receptor activity') - EquivalentClasses('negative regulation of androgen receptor activity' ObjectSomeValueFrom('negatively_regulates' 'androgen receptor activity') ) - SubClassOf('negative regulation of androgen receptor activity' ObjectSomeValueFrom('negatively_regulates' 'androgen receptor activity')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0007357 label: positive regulation of central gap gene transcription - SubClassOf('positive regulation of central gap gene transcription' 'positive regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of central gap gene transcription' 'regulation of transcription involved in anterior/posterior axis specification') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000283 label: engineered_foreign_transposable_element_gene - SubClassOf('engineered_foreign_transposable_element_gene' 'engineered_foreign_gene') - SubClassOf('engineered_foreign_transposable_element_gene' 'transposable_element_gene') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000128 label: gene_silenced_by_DNA_modification - SubClassOf('gene_silenced_by_DNA_modification' 'silenced_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0052912 label: 23S rRNA (guanine(748)-N(1))-methyltransferase activity - SubClassOf('23S rRNA (guanine(748)-N(1))-methyltransferase activity' 'rRNA (guanine-N1-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000375 label: RNA splicing, via transesterification reactions - SubClassOf('RNA splicing, via transesterification reactions' 'RNA splicing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033423 label: CCA codon-amino acid adaptor activity - SubClassOf('CCA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000966 label: RNA 5'-end processing - EquivalentClasses('mitochondrial RNA 5'-end processing' 'RNA 5'-end processing' ) - SubClassOf('RNA 5'-end processing' 'RNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0048096 label: chromatin-mediated maintenance of transcription - SubClassOf('chromatin-mediated maintenance of transcription' 'positive regulation of gene expression, epigenetic') - SubClassOf('chromatin-mediated maintenance of transcription' 'positive regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001020 label: RNA polymerase III type 3 promoter transcriptional preinitiation complex assembly - SubClassOf('RNA polymerase III type 3 promoter transcriptional preinitiation complex assembly' 'RNA polymerase III transcriptional preinitiation complex assembly') - SubClassOf('RNA polymerase III type 3 promoter transcriptional preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase III type 3 promoter')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0001896 label: transposable_element_CDS - SubClassOf('transposable_element_CDS' ObjectSomeValueFrom('part_of' 'transposable_element')) - SubClassOf('transposable_element_CDS' 'transcript_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000632 label: negative regulation of pre-miRNA processing - EquivalentClasses('negative regulation of pre-miRNA processing' ObjectSomeValueFrom('negatively_regulates' 'pre-miRNA processing') ) - SubClassOf('negative regulation of pre-miRNA processing' ObjectSomeValueFrom('negatively_regulates' 'pre-miRNA processing')) - SubClassOf('negative regulation of pre-miRNA processing' 'regulation of pre-miRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071047 label: polyadenylation-dependent mRNA catabolic process - SubClassOf('polyadenylation-dependent mRNA catabolic process' 'biological_process') - SubClassOf('polyadenylation-dependent mRNA catabolic process' ObjectSomeValueFrom('has_part' 'mRNA polyadenylation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0006448 label: regulation of translational elongation - EquivalentClasses('regulation of translational elongation' ObjectSomeValueFrom('regulates' 'translational elongation') ) - SubClassOf('regulation of translational elongation' ObjectSomeValueFrom('regulates' 'translational elongation')) - SubClassOf('regulation of translational elongation' 'regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000489 label: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) - SubClassOf('maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)' 'maturation of SSU-rRNA') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000158 label: PrimaryCardiacLipoma - SubClassOf('PrimaryCardiacLipoma' 'ConnectiveOrigin') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006348 label: chromatin silencing at telomere - SubClassOf('chromatin silencing at telomere' 'chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060796 label: regulation of transcription involved in primary germ layer cell fate commitment - SubClassOf('regulation of transcription involved in primary germ layer cell fate commitment' 'regulation of transcription involved in cell fate commitment') - SubClassOf('regulation of transcription involved in primary germ layer cell fate commitment' 'biological_process') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in primary germ layer cell fate commitment' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0071263 label: negative regulation of translational initiation in response to starvation - SubClassOf('negative regulation of translational initiation in response to starvation' 'regulation of translational initiation in response to starvation') - SubClassOf('negative regulation of translational initiation in response to starvation' 'negative regulation of translational initiation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_33213 label: Bilateria - SubClassOf('Bilateria' 'Eumetazoa') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061427 label: negative regulation of ceramide biosynthetic process by negative regulation of transcription from RNA Polymerase II promoter - SubClassOf('negative regulation of ceramide biosynthetic process by negative regulation of transcription from RNA Polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of ceramide biosynthetic process by negative regulation of transcription from RNA Polymerase II promoter' ) - SubClassOf('negative regulation of ceramide biosynthetic process by negative regulation of transcription from RNA Polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006396 label: RNA processing - EquivalentClasses('mitochondrial RNA processing' 'RNA processing' ) - SubClassOf('RNA processing' ObjectSomeValueFrom('part_of' 'gene expression')) - SubClassOf('RNA processing' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000365 label: mRNA trans splicing, via spliceosome - SubClassOf('mRNA trans splicing, via spliceosome' 'mRNA splicing, via spliceosome') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_10229 label: Chaetognatha - SubClassOf('Chaetognatha' 'Deuterostomia') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000281 label: engineered_foreign_gene - SubClassOf('engineered_foreign_gene' 'engineered_gene') - SubClassOf('engineered_foreign_gene' 'foreign_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002191 label: cap-dependent translational initiation - SubClassOf('cap-dependent translational initiation' 'cytoplasmic translational initiation') --- Class Changed: http://purl.org/obo/owl/omit#GO_1990013 label: presynaptic grid - SubClassOf('presynaptic grid' ObjectSomeValueFrom('part_of' 'presynaptic active zone')) - SubClassOf('presynaptic grid' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901588 label: dendritic microtubule - SubClassOf('dendritic microtubule' ObjectSomeValueFrom('part_of' 'dendrite')) - SubClassOf('dendritic microtubule' 'neuron part') - EquivalentClasses('dendritic microtubule' ObjectSomeValueFrom('part_of' 'dendrite') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0007323 label: peptide pheromone maturation - SubClassOf('peptide pheromone maturation' 'protein maturation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035956 label: regulation of starch catabolic process by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of starch catabolic process by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of starch catabolic process by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_543769 label: Rhizaria - SubClassOf('Rhizaria' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039606 label: suppression by virus of host translation initiation - SubClassOf('suppression by virus of host translation initiation' 'suppression by virus of host translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0004879 label: ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity - SubClassOf('ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity' 'sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061158 label: 3'-UTR-mediated mRNA destabilization - SubClassOf('3'-UTR-mediated mRNA destabilization' 'mRNA destabilization') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_42452 label: unclassified eukaryotes - SubClassOf('unclassified eukaryotes' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061397 label: positive regulation of transcription from RNA polymerase II promoter in response to copper ion - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to copper ion' 'regulation of transcription from RNA polymerase II promoter in response to copper ion') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to copper ion' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000470 label: maturation of LSU-rRNA - SubClassOf('maturation of LSU-rRNA' 'rRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000237 label: positive regulation of tRNA processing - SubClassOf('positive regulation of tRNA processing' 'regulation of tRNA processing') - SubClassOf('positive regulation of tRNA processing' ObjectSomeValueFrom('positively_regulates' 'tRNA processing')) - EquivalentClasses('positive regulation of tRNA processing' ObjectSomeValueFrom('positively_regulates' 'tRNA processing') ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000312 label: TransverseColon - SubClassOf('TransverseColon' 'Colon') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000285 label: foreign_gene - SubClassOf('foreign_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#span_TemporalRegion label: temporal_region - SubClassOf('temporal_region' 'occurrent') - EquivalentClasses('temporal_region' ObjectUnionOf('connected_temporal_region' 'scattered_temporal_region') ) - DisjointClasses('spatiotemporal_region' 'temporal_region') - DisjointClasses('processual_entity' 'temporal_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_2001164 label: negative regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues - SubClassOf('negative regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' ObjectSomeValueFrom('negatively_regulates' 'phosphorylation of RNA polymerase II C-terminal domain serine 2 residues')) - SubClassOf('negative regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' 'negative regulation of phosphorylation of RNA polymerase II C-terminal domain') - SubClassOf('negative regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' 'regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues') - EquivalentClasses('negative regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' ObjectSomeValueFrom('negatively_regulates' 'phosphorylation of RNA polymerase II C-terminal domain serine 2 residues') ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000231 label: AntihyperlipidemicTreatment - SubClassOf('AntihyperlipidemicTreatment' 'PharmaceuticalTreatment') --- Class Changed: http://purl.org/obo/owl/omit#MOD_00818 label: glycosylphosphatidylinositolated residue - SubClassOf('glycosylphosphatidylinositolated residue' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043631 label: RNA polyadenylation - SubClassOf('RNA polyadenylation' 'RNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016539 label: intein-mediated protein splicing - SubClassOf('intein-mediated protein splicing' 'protein splicing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044633 label: modulation of complement activation, alternative pathway in other organism - SubClassOf('modulation of complement activation, alternative pathway in other organism' 'regulation of complement activation, alternative pathway') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060816 label: random inactivation of X chromosome - SubClassOf('random inactivation of X chromosome' 'dosage compensation by inactivation of X chromosome') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097301 label: regulation of potassium ion concentration by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of potassium ion concentration by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#PR_000018264 label: proteolytic cleavage product - SubClassOf('proteolytic cleavage product' 'amino acid chain') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006433 label: prolyl-tRNA aminoacylation - SubClassOf('prolyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') - EquivalentClasses('prolyl-tRNA aminoacylation' 'mitochondrial prolyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0009373 label: regulation of transcription by pheromones - SubClassOf('regulation of transcription by pheromones' 'regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043045 label: DNA methylation involved in embryo development - EquivalentClasses('DNA methylation' 'DNA methylation involved in embryo development' ) - SubClassOf('DNA methylation involved in embryo development' 'biological_process') - SubClassOf('DNA methylation involved in embryo development' 'DNA methylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901312 label: negative regulation of gene expression involved in extracellular matrix organization - SubClassOf('negative regulation of gene expression involved in extracellular matrix organization' 'negative regulation of gene expression') - SubClassOf('negative regulation of gene expression involved in extracellular matrix organization' ObjectSomeValueFrom('negatively_regulates' 'gene expression involved in extracellular matrix organization')) - EquivalentClasses('negative regulation of gene expression involved in extracellular matrix organization' ObjectSomeValueFrom('negatively_regulates' 'gene expression involved in extracellular matrix organization') ) - SubClassOf('negative regulation of gene expression involved in extracellular matrix organization' 'regulation of gene expression involved in extracellular matrix organization') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044292 label: dendrite terminus - SubClassOf('dendrite terminus' 'neuron part') - SubClassOf('dendrite terminus' ObjectSomeValueFrom('part_of' 'dendrite')) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_7777 label: Chondrichthyes - SubClassOf('Chondrichthyes' 'Gnathostomata') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036278 label: positive regulation of transcription from RNA polymerase II promoter in response to nitrogen starvation - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to nitrogen starvation' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060195 label: negative regulation of antisense RNA transcription - EquivalentClasses('negative regulation of antisense RNA transcription' ObjectSomeValueFrom('negatively_regulates' 'antisense RNA transcription') ) - SubClassOf('negative regulation of antisense RNA transcription' 'negative regulation of transcription, DNA-dependent') - SubClassOf('negative regulation of antisense RNA transcription' 'regulation of antisense RNA transcription') - SubClassOf('negative regulation of antisense RNA transcription' ObjectSomeValueFrom('negatively_regulates' 'antisense RNA transcription')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0030451 label: regulation of complement activation, alternative pathway - SubClassOf('regulation of complement activation, alternative pathway' 'regulation of complement activation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046018 label: positive regulation of transcription from RNA polymerase I promoter during mitosis - EquivalentClasses('positive regulation of transcription from RNA polymerase I promoter' 'positive regulation of transcription from RNA polymerase I promoter during mitosis' ) - SubClassOf('positive regulation of transcription from RNA polymerase I promoter during mitosis' 'positive regulation of transcription from RNA polymerase I promoter') - SubClassOf('positive regulation of transcription from RNA polymerase I promoter during mitosis' 'regulation of transcription from RNA polymerase I promoter, mitotic') - SubClassOf('positive regulation of transcription from RNA polymerase I promoter during mitosis' 'positive regulation of transcription during mitosis') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000351 label: SpinalNerves - SubClassOf('SpinalNerves' 'PeripheralNerves') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044643 label: envenomation resulting in positive regulation of complement activation, alternative pathway in other organism - SubClassOf('envenomation resulting in positive regulation of complement activation, alternative pathway in other organism' 'envenomation resulting in modulation of complement activation, alternative pathway in other organism') - SubClassOf('envenomation resulting in positive regulation of complement activation, alternative pathway in other organism' ObjectSomeValueFrom('has_part' 'positive regulation of complement activation, alternative pathway in other organism')) --- Class Changed: http://purl.org/obo/owl/omit#GO_1900466 label: positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0010954 label: positive regulation of protein processing - SubClassOf('positive regulation of protein processing' 'regulation of protein processing') - SubClassOf('positive regulation of protein processing' ObjectSomeValueFrom('positively_regulates' 'protein processing')) - EquivalentClasses('positive regulation of protein processing' ObjectSomeValueFrom('positively_regulates' 'protein processing') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0061402 label: positive regulation of transcription from RNA polymerase II promoter in response to acidity - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to acidity' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900224 label: positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry - EquivalentClasses('positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' ObjectSomeValueFrom('positively_regulates' 'nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry') ) - SubClassOf('positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' ObjectSomeValueFrom('positively_regulates' 'nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry')) - SubClassOf('positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000317 label: SuprarenalGlands - SubClassOf('SuprarenalGlands' 'EndocrineOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070144 label: mitochondrial arginyl-tRNA aminoacylation - EquivalentClasses('arginyl-tRNA aminoacylation' 'mitochondrial arginyl-tRNA aminoacylation' ) - SubClassOf('mitochondrial arginyl-tRNA aminoacylation' 'arginyl-tRNA aminoacylation') - SubClassOf('mitochondrial arginyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060261 label: positive regulation of transcription initiation from RNA polymerase II promoter - SubClassOf('positive regulation of transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription initiation from RNA polymerase II promoter')) - SubClassOf('positive regulation of transcription initiation from RNA polymerase II promoter' 'positive regulation of DNA-dependent transcription, initiation') - SubClassOf('positive regulation of transcription initiation from RNA polymerase II promoter' 'regulation of transcription initiation from RNA polymerase II promoter') - EquivalentClasses('positive regulation of transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription initiation from RNA polymerase II promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_2001125 label: negative regulation of translational frameshifting - SubClassOf('negative regulation of translational frameshifting' 'negative regulation of translational elongation') - SubClassOf('negative regulation of translational frameshifting' 'regulation of translational frameshifting') - EquivalentClasses('negative regulation of translational frameshifting' ObjectSomeValueFrom('negatively_regulates' 'translational frameshifting') ) - SubClassOf('negative regulation of translational frameshifting' ObjectSomeValueFrom('negatively_regulates' 'translational frameshifting')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0009299 label: mRNA transcription - SubClassOf('mRNA transcription' 'transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036307 label: 23S rRNA (adenine(2030)-N(6))-methyltransferase activity - SubClassOf('23S rRNA (adenine(2030)-N(6))-methyltransferase activity' 'rRNA (adenine-N6-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033455 label: GCA codon-amino acid adaptor activity - SubClassOf('GCA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0051720 label: DNA (cytosine-5-)-methyltransferase activity, acting on CpNpG substrates - SubClassOf('DNA (cytosine-5-)-methyltransferase activity, acting on CpNpG substrates' 'DNA (cytosine-5-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000111 label: Ectoderm - SubClassOf('Ectoderm' 'EmbryonicTissue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039602 label: suppression by virus of host transcription initiation from RNA polymerase II promoter - SubClassOf('suppression by virus of host transcription initiation from RNA polymerase II promoter' 'suppression by virus of host transcription') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000082 label: SatelliteCell - SubClassOf('SatelliteCell' 'MacroglialCell') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901294 label: negative regulation of SREBP signaling pathway by negative regulation of DNA binding - EquivalentClasses('negative regulation of SREBP signaling pathway by negative regulation of DNA binding' ObjectSomeValueFrom('results_in' 'negative regulation of SREBP signaling pathway') ) - SubClassOf('negative regulation of SREBP signaling pathway by negative regulation of DNA binding' 'negative regulation of SREBP signaling pathway') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032968 label: positive regulation of transcription elongation from RNA polymerase II promoter - EquivalentClasses('positive regulation of transcription elongation from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription elongation from RNA polymerase II promoter') ) - SubClassOf('positive regulation of transcription elongation from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription elongation from RNA polymerase II promoter')) - SubClassOf('positive regulation of transcription elongation from RNA polymerase II promoter' 'regulation of transcription elongation from RNA polymerase II promoter') - SubClassOf('positive regulation of transcription elongation from RNA polymerase II promoter' 'positive regulation of DNA-dependent transcription, elongation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035196 label: production of miRNAs involved in gene silencing by miRNA - SubClassOf('production of miRNAs involved in gene silencing by miRNA' ObjectSomeValueFrom('part_of' 'gene silencing by miRNA')) - SubClassOf('production of miRNAs involved in gene silencing by miRNA' 'production of small RNA involved in gene silencing by RNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039549 label: suppression by virus of host IRF3 activity by inhibition of IRF3 phosphorylation - SubClassOf('suppression by virus of host IRF3 activity by inhibition of IRF3 phosphorylation' 'suppression by virus of host IRF3 activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000134 label: Fungallnfection - SubClassOf('Fungallnfection' 'Infection') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000068 label: TLymphocytes - SubClassOf('TLymphocytes' 'Lymphocytes') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001038 label: RNA polymerase III hybrid type promoter TFIIIB recruiting transcription factor activity - SubClassOf('RNA polymerase III hybrid type promoter TFIIIB recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III hybrid type promoter transcriptional preinitiation complex assembly')) - SubClassOf('RNA polymerase III hybrid type promoter TFIIIB recruiting transcription factor activity' 'RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033426 label: CAC codon-amino acid adaptor activity - SubClassOf('CAC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036316 label: SREBP-SCAP complex retention in endoplasmic reticulum - SubClassOf('SREBP-SCAP complex retention in endoplasmic reticulum' 'negative regulation of SREBP signaling pathway') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900387 label: negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter - SubClassOf('negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900406 label: regulation of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090203 label: transcriptional activation by promoter-terminator looping - SubClassOf('transcriptional activation by promoter-terminator looping' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000144 label: PrimaryCardiacRhabdomyoma - SubClassOf('PrimaryCardiacRhabdomyoma' 'HamartomaOrMalformation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007532 label: regulation of mating-type specific transcription, DNA-dependent - SubClassOf('regulation of mating-type specific transcription, DNA-dependent' 'regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001073 label: DNA binding transcription antitermination factor activity - SubClassOf('DNA binding transcription antitermination factor activity' ObjectSomeValueFrom('part_of' 'transcription antitermination')) - SubClassOf('DNA binding transcription antitermination factor activity' 'sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000387 label: RprA_RNA - SubClassOf('RprA_RNA' 'small_regulatory_ncRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030673 label: axolemma - SubClassOf('axolemma' 'axon part') - SubClassOf('axolemma' ObjectSomeValueFrom('part_of' 'main axon')) - SubClassOf('axolemma' 'neuron projection membrane') --- Class Changed: http://purl.org/obo/owl/omit#MOD_01149 label: sumoylated lysine - SubClassOf('sumoylated lysine' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007072 label: positive regulation of transcription on exit from mitosis - SubClassOf('positive regulation of transcription on exit from mitosis' 'biological_process') - SubClassOf('positive regulation of transcription on exit from mitosis' 'positive regulation of transcription during mitosis') - EquivalentClasses('positive regulation of transcription on exit from mitosis' 'positive regulation of transcription, DNA-dependent' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_2001208 label: negative regulation of transcription elongation from RNA polymerase I promoter - EquivalentClasses('negative regulation of transcription elongation from RNA polymerase I promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription elongation from RNA polymerase I promoter') ) - SubClassOf('negative regulation of transcription elongation from RNA polymerase I promoter' 'regulation of transcription elongation from RNA polymerase I promoter') - SubClassOf('negative regulation of transcription elongation from RNA polymerase I promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription elongation from RNA polymerase I promoter')) - SubClassOf('negative regulation of transcription elongation from RNA polymerase I promoter' 'negative regulation of DNA-dependent transcription, elongation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0005623 label: cell - SubClassOf('cell' 'cellular_component') - SubClassOf('cell' ObjectSomeValueFrom('geneExpressedln' 'candidate_gene')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0097467 label: type III terminal bouton - SubClassOf('type III terminal bouton' 'terminal bouton') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001084 label: TFIID-class binding transcription factor activity - SubClassOf('TFIID-class binding transcription factor activity' 'RNA polymerase II basal transcription factor binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060500 label: regulation of transcription from RNA polymerase II promoter involved in lung bud formation - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in lung bud formation' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045013 label: carbon catabolite repression of transcription - SubClassOf('carbon catabolite repression of transcription' 'negative regulation of transcription, DNA-dependent') - SubClassOf('carbon catabolite repression of transcription' 'carbon catabolite regulation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001204 label: metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity - SubClassOf('metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity' 'sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity') - SubClassOf('metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity' 'metal ion regulated sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070897 label: DNA-dependent transcriptional preinitiation complex assembly - SubClassOf('DNA-dependent transcriptional preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'DNA-dependent transcription, initiation')) - SubClassOf('DNA-dependent transcriptional preinitiation complex assembly' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006384 label: transcription initiation from RNA polymerase III promoter - SubClassOf('transcription initiation from RNA polymerase III promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter')) - SubClassOf('transcription initiation from RNA polymerase III promoter' 'DNA-dependent transcription, initiation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042464 label: dosage compensation by hypoactivation of X chromosome - SubClassOf('dosage compensation by hypoactivation of X chromosome' 'dosage compensation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000457 label: endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) - SubClassOf('endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)' ObjectSomeValueFrom('part_of' 'maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)')) - SubClassOf('endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)') - SubClassOf('endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)' ObjectSomeValueFrom('part_of' 'maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0045894 label: negative regulation of mating-type specific transcription, DNA-dependent - SubClassOf('negative regulation of mating-type specific transcription, DNA-dependent' 'regulation of mating-type specific transcription, DNA-dependent') - SubClassOf('negative regulation of mating-type specific transcription, DNA-dependent' 'negative regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070940 label: dephosphorylation of RNA polymerase II C-terminal domain - SubClassOf('dephosphorylation of RNA polymerase II C-terminal domain' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900471 label: negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter - SubClassOf('negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cellular carbohydrate metabolic process by negative regulation of transcription, DNA-dependent') - SubClassOf('negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' 'regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901836 label: regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter - SubClassOf('regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' ObjectSomeValueFrom('regulates' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter')) - SubClassOf('regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' 'regulation of transcription from RNA polymerase I promoter') - EquivalentClasses('regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' ObjectSomeValueFrom('regulates' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_136087 label: Malawimonadidae - SubClassOf('Malawimonadidae' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000456 label: dimethylation involved in SSU-rRNA maturation - SubClassOf('dimethylation involved in SSU-rRNA maturation' ObjectSomeValueFrom('part_of' 'maturation of SSU-rRNA')) - SubClassOf('dimethylation involved in SSU-rRNA maturation' 'rRNA methylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900405 label: regulation of cytokinetic cell separation by regulation of transcription from RNA polymerase II promoter - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of cytokinetic cell separation by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of cytokinetic cell separation by regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('regulation of cytokinetic cell separation by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900475 label: positive regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter' 'regulation of meiosis by regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'positive regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0008079 label: translation termination factor activity - SubClassOf('translation termination factor activity' ObjectSomeValueFrom('part_of' 'translational termination')) - SubClassOf('translation termination factor activity' 'translation factor activity, nucleic acid binding') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002937 label: tRNA 4-thiouridine biosynthesis - SubClassOf('tRNA 4-thiouridine biosynthesis' 'tRNA thio-modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044300 label: cerebellar mossy fiber - SubClassOf('cerebellar mossy fiber' 'axon') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071620 label: phosphorylation of RNA polymerase II C-terminal domain serine 5 residues - SubClassOf('phosphorylation of RNA polymerase II C-terminal domain serine 5 residues' 'phosphorylation of RNA polymerase II C-terminal domain') --- Class Changed: http://purl.org/obo/owl/omit#GO_0003708 label: retinoic acid receptor activity - SubClassOf('retinoic acid receptor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032058 label: positive regulation of translational initiation in response to stress - SubClassOf('positive regulation of translational initiation in response to stress' 'regulation of translational initiation in response to stress') - SubClassOf('positive regulation of translational initiation in response to stress' 'positive regulation of translational initiation') - SubClassOf('positive regulation of translational initiation in response to stress' 'positive regulation of translation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000354 label: cis assembly of pre-catalytic spliceosome - SubClassOf('cis assembly of pre-catalytic spliceosome' ObjectSomeValueFrom('part_of' 'mRNA cis splicing, via spliceosome')) - SubClassOf('cis assembly of pre-catalytic spliceosome' 'biological_process') - SubClassOf('cis assembly of pre-catalytic spliceosome' ObjectSomeValueFrom('part_of' 'spliceosomal complex assembly')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0097444 label: spine apparatus - SubClassOf('spine apparatus' ObjectSomeValueFrom('part_of' 'neuron spine')) - SubClassOf('spine apparatus' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001203 label: RNA_polymerase_promoter - SubClassOf('RNA_polymerase_promoter' 'promoter') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000898 label: epigenetically_modified_gene - SubClassOf('epigenetically_modified_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033443 label: AAA codon-amino acid adaptor activity - SubClassOf('AAA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060906 label: negative regulation of chromatin silencing by small RNA - SubClassOf('negative regulation of chromatin silencing by small RNA' 'negative regulation of gene silencing by RNA') - SubClassOf('negative regulation of chromatin silencing by small RNA' 'negative regulation of chromatin silencing') - SubClassOf('negative regulation of chromatin silencing by small RNA' 'regulation of chromatin silencing by small RNA') - SubClassOf('negative regulation of chromatin silencing by small RNA' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing by small RNA')) - EquivalentClasses('negative regulation of chromatin silencing by small RNA' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing by small RNA') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001035 label: transcription from RNA polymerase III type 3 promoter - SubClassOf('transcription from RNA polymerase III type 3 promoter' 'transcription from RNA polymerase III promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010629 label: negative regulation of gene expression - EquivalentClasses('negative regulation of gene expression' ObjectSomeValueFrom('negatively_regulates' 'gene expression') ) - SubClassOf('negative regulation of gene expression' ObjectSomeValueFrom('negatively_regulates' 'gene expression')) - SubClassOf('negative regulation of gene expression' 'regulation of gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033406 label: UCC codon-amino acid adaptor activity - SubClassOf('UCC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070900 label: mitochondrial tRNA modification - SubClassOf('mitochondrial tRNA modification' 'tRNA modification') - SubClassOf('mitochondrial tRNA modification' 'mitochondrial RNA processing') - EquivalentClasses('tRNA modification' 'mitochondrial tRNA modification' ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000311 label: DescendingColon - SubClassOf('DescendingColon' 'Colon') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900465 label: negative regulation of arginine catabolic process by negative regulation of transcription from RNA polymerase II promoter - SubClassOf('negative regulation of arginine catabolic process by negative regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter') - SubClassOf('negative regulation of arginine catabolic process by negative regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of arginine catabolic process by negative regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0030514 label: negative regulation of BMP signaling pathway - EquivalentClasses('negative regulation of BMP signaling pathway' ObjectSomeValueFrom('negatively_regulates' 'BMP signaling pathway') ) - SubClassOf('negative regulation of BMP signaling pathway' ObjectSomeValueFrom('negatively_regulates' 'BMP signaling pathway')) - SubClassOf('negative regulation of BMP signaling pathway' 'regulation of BMP signaling pathway') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_314294 label: Cercopithecoidea - SubClassOf('Cercopithecoidea' 'Catarrhini') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000617 label: RNApol_III_promoter_type_1 - SubClassOf('RNApol_III_promoter_type_1' 'RNApol_III_promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039604 label: suppression by virus of host translation - SubClassOf('suppression by virus of host translation' 'suppression by virus of host gene expression') - SubClassOf('suppression by virus of host translation' 'modulation by virus of host translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900388 label: regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000232 label: AntihypertensiveTreatment - SubClassOf('AntihypertensiveTreatment' 'PharmaceuticalTreatment') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_207598 label: Homininae - SubClassOf('Homininae' 'Hominidae') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001059 label: transcription from RNA polymerase IV promoter - SubClassOf('transcription from RNA polymerase IV promoter' 'transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000331 label: CysternaChyli - SubClassOf('CysternaChyli' 'LymphaticVessels') --- Class Changed: http://purl.org/obo/owl/omit#GO_0003743 label: translation initiation factor activity - SubClassOf('translation initiation factor activity' ObjectSomeValueFrom('part_of' 'translational initiation')) - SubClassOf('translation initiation factor activity' 'translation factor activity, nucleic acid binding') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060807 label: regulation of transcription from RNA polymerase II promoter involved in definitive endodermal cell fate specification - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in definitive endodermal cell fate specification' 'regulation of transcription involved in primary germ layer cell fate commitment') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070901 label: mitochondrial tRNA methylation - SubClassOf('mitochondrial tRNA methylation' 'mitochondrial tRNA modification') - SubClassOf('mitochondrial tRNA methylation' 'tRNA methylation') - EquivalentClasses('tRNA methylation' 'mitochondrial tRNA methylation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0006391 label: transcription initiation from mitochondrial promoter - SubClassOf('transcription initiation from mitochondrial promoter' 'DNA-dependent transcription, initiation') - SubClassOf('transcription initiation from mitochondrial promoter' ObjectSomeValueFrom('part_of' 'transcription from mitochondrial promoter')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000340 label: Brainstem - SubClassOf('Brainstem' 'Brain') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002181 label: cytoplasmic translation - SubClassOf('cytoplasmic translation' 'translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043487 label: regulation of RNA stability - SubClassOf('regulation of RNA stability' 'posttranscriptional regulation of gene expression') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000107 label: Cartilage - SubClassOf('Cartilage' 'ConnectiveTissue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060149 label: negative regulation of posttranscriptional gene silencing - SubClassOf('negative regulation of posttranscriptional gene silencing' 'negative regulation of gene silencing') - SubClassOf('negative regulation of posttranscriptional gene silencing' 'regulation of posttranscriptional gene silencing') - SubClassOf('negative regulation of posttranscriptional gene silencing' ObjectSomeValueFrom('negatively_regulates' 'posttranscriptional gene silencing')) - EquivalentClasses('negative regulation of posttranscriptional gene silencing' ObjectSomeValueFrom('negatively_regulates' 'posttranscriptional gene silencing') ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000078 label: Astrocyte - SubClassOf('Astrocyte' 'MacroglialCell') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000269 label: SubclavianArtery - SubClassOf('SubclavianArtery' 'Artery') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001174 label: transcriptional start site selection at RNA polymerase II promoter - SubClassOf('transcriptional start site selection at RNA polymerase II promoter' 'DNA-dependent transcriptional start site selection') - SubClassOf('transcriptional start site selection at RNA polymerase II promoter' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0035390 label: establishment of chromatin silencing at telomere - SubClassOf('establishment of chromatin silencing at telomere' 'establishment of chromatin silencing') - SubClassOf('establishment of chromatin silencing at telomere' ObjectSomeValueFrom('part_of' 'chromatin silencing at telomere')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0072670 label: mitochondrial tRNA threonylcarbamoyladenosine modification - SubClassOf('mitochondrial tRNA threonylcarbamoyladenosine modification' 'mitochondrial tRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034965 label: intronic box C/D snoRNA processing - SubClassOf('intronic box C/D snoRNA processing' 'intronic snoRNA processing') - SubClassOf('intronic box C/D snoRNA processing' 'box C/D snoRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#SO_0005836 label: regulatory_region - SubClassOf('regulatory_region' 'gene_member_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901522 label: positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus - SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus' 'biological_process') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus' ) - SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033438 label: ACC codon-amino acid adaptor activity - SubClassOf('ACC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#MOD_00127 label: N6-lipoyl-L-lysine - SubClassOf('N6-lipoyl-L-lysine' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_590648 label: Breviatea - SubClassOf('Breviatea' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901222 label: regulation of NIK/NF-kappaB cascade - EquivalentClasses('regulation of NIK/NF-kappaB cascade' ObjectSomeValueFrom('regulates' 'NIK/NF-kappaB cascade') ) - SubClassOf('regulation of NIK/NF-kappaB cascade' 'biological_process') - SubClassOf('regulation of NIK/NF-kappaB cascade' ObjectSomeValueFrom('regulates' 'NIK/NF-kappaB cascade')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000271 label: VertebralArtery - SubClassOf('VertebralArtery' 'Artery') --- Class Changed: http://purl.org/obo/owl/omit#GO_0004880 label: juvenile hormone receptor activity - SubClassOf('juvenile hormone receptor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901309 label: negative regulation of sterol regulatory element binding protein cleavage - SubClassOf('negative regulation of sterol regulatory element binding protein cleavage' ObjectSomeValueFrom('negatively_regulates' 'sterol regulatory element binding protein cleavage')) - SubClassOf('negative regulation of sterol regulatory element binding protein cleavage' 'negative regulation of protein processing') - EquivalentClasses('negative regulation of sterol regulatory element binding protein cleavage' ObjectSomeValueFrom('negatively_regulates' 'sterol regulatory element binding protein cleavage') ) - SubClassOf('negative regulation of sterol regulatory element binding protein cleavage' 'regulation of sterol regulatory element binding protein cleavage') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000117 label: RadiationExposure - SubClassOf('RadiationExposure' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000172 label: LangerhansCellHistiocytosis - SubClassOf('LangerhansCellHistiocytosis' 'LeukemiaAndLymphoma') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_9392 label: Scandentia - SubClassOf('Scandentia' 'Euarchontoglires') --- Class Changed: http://purl.org/obo/owl/omit#GO_0009007 label: site-specific DNA-methyltransferase (adenine-specific) activity - SubClassOf('site-specific DNA-methyltransferase (adenine-specific) activity' ObjectSomeValueFrom('part_of' 'DNA methylation on adenine')) - SubClassOf('site-specific DNA-methyltransferase (adenine-specific) activity' 'DNA-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016429 label: tRNA (adenine-N1-)-methyltransferase activity - SubClassOf('tRNA (adenine-N1-)-methyltransferase activity' 'tRNA (adenine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006425 label: glutaminyl-tRNA aminoacylation - SubClassOf('glutaminyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') - EquivalentClasses('glutaminyl-tRNA aminoacylation' 'mitochondrial glutaminyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0043204 label: perikaryon - SubClassOf('perikaryon' 'neuron part') - SubClassOf('perikaryon' ObjectSomeValueFrom('part_of' 'neuronal cell body')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0045301 label: tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity - SubClassOf('tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity' ObjectSomeValueFrom('part_of' '2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine-tRNA biosynthesis')) - SubClassOf('tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000807 label: PositiveStrandInsertion - SubClassOf('PositiveStrandInsertion' 'TEInsertion') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001113 label: transcriptional open complex formation at RNA polymerase II promoter - SubClassOf('transcriptional open complex formation at RNA polymerase II promoter' 'DNA-dependent transcriptional open complex formation') - SubClassOf('transcriptional open complex formation at RNA polymerase II promoter' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0070475 label: rRNA base methylation - SubClassOf('rRNA base methylation' 'rRNA methylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000352 label: trans assembly of SL-containing precatalytic spliceosome - SubClassOf('trans assembly of SL-containing precatalytic spliceosome' ObjectSomeValueFrom('part_of' 'spliceosomal complex assembly')) - SubClassOf('trans assembly of SL-containing precatalytic spliceosome' ObjectSomeValueFrom('part_of' 'mRNA trans splicing, SL addition')) - SubClassOf('trans assembly of SL-containing precatalytic spliceosome' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090055 label: positive regulation of chromatin silencing at silent mating-type cassette - SubClassOf('positive regulation of chromatin silencing at silent mating-type cassette' 'positive regulation of chromatin silencing') - SubClassOf('positive regulation of chromatin silencing at silent mating-type cassette' 'regulation of chromatin silencing at silent mating-type cassette') - EquivalentClasses('positive regulation of chromatin silencing at silent mating-type cassette' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing at silent mating-type cassette') ) - SubClassOf('positive regulation of chromatin silencing at silent mating-type cassette' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing at silent mating-type cassette')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000842 label: gene_component_region - SubClassOf('gene_component_region' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044030 label: regulation of DNA methylation - EquivalentClasses('regulation of DNA methylation' ObjectSomeValueFrom('regulates' 'DNA methylation') ) - SubClassOf('regulation of DNA methylation' ObjectSomeValueFrom('regulates' 'DNA methylation')) - SubClassOf('regulation of DNA methylation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061403 label: positive regulation of transcription from RNA polymerase II promoter in response to nitrosative stress - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to nitrosative stress' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060566 label: positive regulation of DNA-dependent transcription, termination - EquivalentClasses('positive regulation of DNA-dependent transcription, termination' ObjectSomeValueFrom('positively_regulates' 'DNA-dependent transcription, termination') ) - SubClassOf('positive regulation of DNA-dependent transcription, termination' 'positive regulation of transcription, DNA-dependent') - SubClassOf('positive regulation of DNA-dependent transcription, termination' ObjectSomeValueFrom('positively_regulates' 'DNA-dependent transcription, termination')) - SubClassOf('positive regulation of DNA-dependent transcription, termination' 'regulation of DNA-dependent transcription, termination') --- Class Changed: http://purl.org/obo/owl/omit#GO_0019802 label: cyclization of glutamine involved in intein-mediated protein splicing - SubClassOf('cyclization of glutamine involved in intein-mediated protein splicing' ObjectSomeValueFrom('part_of' 'intein-mediated protein splicing')) - SubClassOf('cyclization of glutamine involved in intein-mediated protein splicing' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0072361 label: regulation of glycolysis by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of glycolysis by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of glycolysis by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#MOD_01187 label: L-pyrrolysine residue - SubClassOf('L-pyrrolysine residue' 'pre-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016458 label: gene silencing - SubClassOf('gene silencing' 'negative regulation of gene expression') - EquivalentClasses('gene silencing involved in chronological cell aging' 'gene silencing' ) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000712 label: gene_with_transcript_with_translational_frameshift - SubClassOf('gene_with_transcript_with_translational_frameshift' 'gene_with_recoded_mRNA') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000260 label: AxillaryArtery - SubClassOf('AxillaryArtery' 'Artery') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010998 label: regulation of translational initiation by eIF2 alpha phosphorylation - SubClassOf('regulation of translational initiation by eIF2 alpha phosphorylation' 'regulation of translational initiation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#snap_Quality label: quality - SubClassOf('quality' 'specifically_dependent_continuant') - DisjointClasses('quality' 'realizable_entity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045893 label: positive regulation of transcription, DNA-dependent - EquivalentClasses('positive regulation of transcription, DNA-dependent' 'positive regulation of transcription during mitosis' ) - EquivalentClasses('positive regulation of transcription, DNA-dependent' 'positive regulation of transcription involved in egg activation' ) - SubClassOf('positive regulation of transcription, DNA-dependent' 'regulation of transcription, DNA-dependent') - EquivalentClasses('positive regulation of transcription on exit from mitosis' 'positive regulation of transcription, DNA-dependent' ) - EquivalentClasses('positive regulation of transcription, DNA-dependent' 'positive regulation of transcription involved in G2/M transition of mitotic cell cycle' ) - EquivalentClasses('positive regulation of transcription, DNA-dependent' ObjectSomeValueFrom('positively_regulates' 'transcription, DNA-dependent') ) - SubClassOf('positive regulation of transcription, DNA-dependent' 'positive regulation of gene expression') - SubClassOf('positive regulation of transcription, DNA-dependent' ObjectSomeValueFrom('positively_regulates' 'transcription, DNA-dependent')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0052914 label: 16S rRNA (guanine(1207)-N(2))-methyltransferase activity - SubClassOf('16S rRNA (guanine(1207)-N(2))-methyltransferase activity' 'rRNA (guanine-N2-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000183 label: LymphocyteDepletionHL - SubClassOf('LymphocyteDepletionHL' 'HodgkinLymphoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070185 label: mitochondrial valyl-tRNA aminoacylation - SubClassOf('mitochondrial valyl-tRNA aminoacylation' 'valyl-tRNA aminoacylation') - EquivalentClasses('valyl-tRNA aminoacylation' 'mitochondrial valyl-tRNA aminoacylation' ) - SubClassOf('mitochondrial valyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032922 label: circadian regulation of gene expression - SubClassOf('circadian regulation of gene expression' 'regulation of gene expression') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_607660 label: Ponginae - SubClassOf('Ponginae' 'Hominidae') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007319 label: negative regulation of oskar mRNA translation - SubClassOf('negative regulation of oskar mRNA translation' 'regulation of oskar mRNA translation') - SubClassOf('negative regulation of oskar mRNA translation' 'negative regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000235 label: RadiationRelease - SubClassOf('RadiationRelease' 'processual_context') --- Class Changed: http://purl.org/obo/owl/omit#GO_0051719 label: DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates - SubClassOf('DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates' 'DNA (cytosine-5-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001142 label: sequence-specific DNA binding mitochondrial RNA polymerase transcription factor activity - SubClassOf('sequence-specific DNA binding mitochondrial RNA polymerase transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from mitochondrial promoter')) - SubClassOf('sequence-specific DNA binding mitochondrial RNA polymerase transcription factor activity' 'sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0009303 label: rRNA transcription - SubClassOf('rRNA transcription' 'transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016486 label: peptide hormone processing - SubClassOf('peptide hormone processing' 'protein processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000360 label: Myometrium - SubClassOf('Myometrium' 'Uterus') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044306 label: neuron projection terminus - SubClassOf('neuron projection terminus' ObjectSomeValueFrom('part_of' 'neuron projection')) - SubClassOf('neuron projection terminus' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007074 label: positive regulation of transcription on exit from mitosis, from RNA polymerase II promoter - SubClassOf('positive regulation of transcription on exit from mitosis, from RNA polymerase II promoter' 'positive regulation of transcription on exit from mitosis') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001872 label: rearrangement_breakpoint - SubClassOf('rearrangement_breakpoint' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0009304 label: tRNA transcription - SubClassOf('tRNA transcription' 'transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000277 label: Valves - SubClassOf('Valves' 'Heart') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001036 label: transcription initiation from RNA polymerase III hybrid type promoter - SubClassOf('transcription initiation from RNA polymerase III hybrid type promoter' ObjectSomeValueFrom('part_of' 'transcription from a RNA polymerase III hybrid type promoter')) - SubClassOf('transcription initiation from RNA polymerase III hybrid type promoter' 'transcription initiation from RNA polymerase III promoter') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000226 label: PhysicalTherapy - SubClassOf('PhysicalTherapy' 'Treatment') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006359 label: regulation of transcription from RNA polymerase III promoter - SubClassOf('regulation of transcription from RNA polymerase III promoter' 'regulation of transcription, DNA-dependent') - SubClassOf('regulation of transcription from RNA polymerase III promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase III promoter')) - EquivalentClasses('regulation of transcription from RNA polymerase III promoter' 'regulation of transcription from RNA polymerase III promoter, mitotic' ) - EquivalentClasses('regulation of transcription from RNA polymerase III promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase III promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0070148 label: mitochondrial glutaminyl-tRNA aminoacylation - SubClassOf('mitochondrial glutaminyl-tRNA aminoacylation' 'glutaminyl-tRNA aminoacylation') - SubClassOf('mitochondrial glutaminyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') - EquivalentClasses('glutaminyl-tRNA aminoacylation' 'mitochondrial glutaminyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000364 label: Testes - SubClassOf('Testes' 'MaleReproductiveSystem') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000268 label: SplenicArtery - SubClassOf('SplenicArtery' 'Artery') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016300 label: tRNA (uracil) methyltransferase activity - SubClassOf('tRNA (uracil) methyltransferase activity' 'tRNA methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061353 label: BMP signaling pathway involved in Malpighian tubule cell chemotaxis - SubClassOf('BMP signaling pathway involved in Malpighian tubule cell chemotaxis' 'biological_process') - EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in Malpighian tubule cell chemotaxis' ) - SubClassOf('BMP signaling pathway involved in Malpighian tubule cell chemotaxis' 'BMP signaling pathway') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061409 label: positive regulation of transcription from RNA polymerase II promoter in response to freezing - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to freezing' 'positive regulation of transcription from RNA polymerase II promoter in response to cold') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901837 label: negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter - SubClassOf('negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' 'regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter') - SubClassOf('negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter')) - EquivalentClasses('negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter') ) - SubClassOf('negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' 'negative regulation of transcription from RNA polymerase I promoter') --- Class Changed: http://purl.org/obo/owl/omit#snap_RealizableEntity label: realizable_entity - SubClassOf('realizable_entity' 'specifically_dependent_continuant') - DisjointClasses('quality' 'realizable_entity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000389 label: mRNA 3'-splice site recognition - SubClassOf('mRNA 3'-splice site recognition' 'mRNA splice site selection') --- Class Changed: http://purl.org/obo/owl/omit#GO_0050434 label: positive regulation of viral transcription - SubClassOf('positive regulation of viral transcription' 'regulation of viral transcription') - EquivalentClasses('positive regulation of viral transcription' ObjectSomeValueFrom('positively_regulates' 'viral transcription') ) - SubClassOf('positive regulation of viral transcription' ObjectSomeValueFrom('positively_regulates' 'viral transcription')) --- Class Changed: http://purl.org/obo/owl/omit#GO_1990032 label: parallel fiber - SubClassOf('parallel fiber' 'axon part') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000097 label: nucleomorph_gene - SubClassOf('nucleomorph_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000138 label: gene_rearranged_at_DNA_level - SubClassOf('gene_rearranged_at_DNA_level' 'epigenetically_modified_gene') --- Class Changed: http://purl.org/obo/owl/omit#PR_000002968 label: post-translationally modified amino-acid residue - SubClassOf('post-translationally modified amino-acid residue' 'modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033445 label: AGU codon-amino acid adaptor activity - SubClassOf('AGU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044748 label: 3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing - EquivalentClasses('3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing' ObjectSomeValueFrom('part_of' 'mature miRNA 3'-end processing') ) - SubClassOf('3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing' 'biological_process') - SubClassOf('3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing' ObjectSomeValueFrom('part_of' 'mature miRNA 3'-end processing')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000154 label: BacillaryAngiomatosis - SubClassOf('BacillaryAngiomatosis' 'ConnectiveOrigin') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002143 label: tRNA wobble position uridine thiolation - SubClassOf('tRNA wobble position uridine thiolation' 'tRNA thio-modification') - SubClassOf('tRNA wobble position uridine thiolation' 'tRNA wobble uridine modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0008384 label: IkappaB kinase activity - SubClassOf('IkappaB kinase activity' ObjectSomeValueFrom('part_of' 'I-kappaB phosphorylation')) - SubClassOf('IkappaB kinase activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071586 label: CAAX-box protein processing - SubClassOf('CAAX-box protein processing' 'protein processing') - SubClassOf('CAAX-box protein processing' ObjectSomeValueFrom('part_of' 'CAAX-box protein maturation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001190 label: RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription - SubClassOf('RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription' 'RNA polymerase II transcription factor binding transcription factor activity') - SubClassOf('RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription' ObjectSomeValueFrom('part_of' 'positive regulation of transcription from RNA polymerase II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#snap_SpecificallyDependentContinuant label: specifically_dependent_continuant - DisjointClasses('generically_dependent_continuant' 'specifically_dependent_continuant') - EquivalentClasses('specifically_dependent_continuant' ObjectUnionOf('quality' 'realizable_entity') ) - SubClassOf('specifically_dependent_continuant' 'dependent_continuant') --- Class Changed: http://purl.org/obo/owl/omit#GO_1902368 label: heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region - EquivalentClasses('heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region' ObjectSomeValueFrom('part_of' 'chromatin silencing at centromere outer repeat region') ) - SubClassOf('heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region' ObjectSomeValueFrom('part_of' 'chromatin silencing at centromere outer repeat region')) - SubClassOf('heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region' 'heterochromatin maintenance involved in chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000468 label: generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - SubClassOf('generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'rRNA 3'-end processing') - SubClassOf('generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0006388 label: tRNA splicing, via endonucleolytic cleavage and ligation - SubClassOf('tRNA splicing, via endonucleolytic cleavage and ligation' 'RNA splicing, via endonucleolytic cleavage and ligation') - SubClassOf('tRNA splicing, via endonucleolytic cleavage and ligation' 'tRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_57118 label: Unclassified Primates - SubClassOf('Unclassified Primates' 'Primates') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032809 label: neuronal cell body membrane - SubClassOf('neuronal cell body membrane' ObjectSomeValueFrom('part_of' 'neuronal cell body')) - SubClassOf('neuronal cell body membrane' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030070 label: insulin processing - SubClassOf('insulin processing' 'peptide hormone processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0019056 label: modulation by virus of host transcription - SubClassOf('modulation by virus of host transcription' 'regulation of transcription, DNA-dependent') - SubClassOf('modulation by virus of host transcription' 'modulation by virus of host gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043561 label: regulation of translational initiation in response to osmotic stress - SubClassOf('regulation of translational initiation in response to osmotic stress' 'regulation of translational initiation in response to stress') - SubClassOf('regulation of translational initiation in response to osmotic stress' 'regulation of translation in response to osmotic stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0052905 label: tRNA (guanine(9)-N(1))-methyltransferase activity - SubClassOf('tRNA (guanine(9)-N(1))-methyltransferase activity' 'tRNA (guanine-N1-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000236 label: negative regulation of tRNA processing - SubClassOf('negative regulation of tRNA processing' 'regulation of tRNA processing') - SubClassOf('negative regulation of tRNA processing' ObjectSomeValueFrom('negatively_regulates' 'tRNA processing')) - EquivalentClasses('negative regulation of tRNA processing' ObjectSomeValueFrom('negatively_regulates' 'tRNA processing') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_1900621 label: regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling - EquivalentClasses('regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling' ObjectSomeValueFrom('results_in' 'regulation of transcription from RNA polymerase II promoter') ) - SubClassOf('regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling' ObjectSomeValueFrom('results_in' 'regulation of transcription from RNA polymerase II promoter')) - SubClassOf('regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001266 label: scRNA_gene - SubClassOf('scRNA_gene' 'ncRNA_gene') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000345 label: AutonomicNervousSystem - SubClassOf('AutonomicNervousSystem' 'PeripheralNervousSystem') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_6040 label: Porifera - SubClassOf('Porifera' 'Metazoa') --- Class Changed: http://purl.org/obo/owl/omit#GO_0038167 label: epidermal growth factor receptor signaling pathway via positive regulation of NF-kappaB transcription factor activity - SubClassOf('epidermal growth factor receptor signaling pathway via positive regulation of NF-kappaB transcription factor activity' 'biological_process') - SubClassOf('epidermal growth factor receptor signaling pathway via positive regulation of NF-kappaB transcription factor activity' ObjectSomeValueFrom('has_part' 'positive regulation of NF-kappaB transcription factor activity')) --- Class Changed: http://purl.org/obo/owl/omit#GO_1900382 label: regulation of thiamine biosynthetic process by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of thiamine biosynthetic process by regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of thiamine biosynthetic process by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of thiamine biosynthetic process by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030466 label: chromatin silencing at silent mating-type cassette - SubClassOf('chromatin silencing at silent mating-type cassette' 'chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060819 label: inactivation of X chromosome by genetic imprinting - SubClassOf('inactivation of X chromosome by genetic imprinting' 'regulation of gene expression by genetic imprinting') - SubClassOf('inactivation of X chromosome by genetic imprinting' 'dosage compensation by inactivation of X chromosome') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001411 label: biological_region - SubClassOf('biological_region' 'region') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000181 label: MatureBCellNeoplasm - SubClassOf('MatureBCellNeoplasm' 'LymphoidNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045902 label: negative regulation of translational fidelity - SubClassOf('negative regulation of translational fidelity' 'regulation of translational fidelity') - SubClassOf('negative regulation of translational fidelity' 'negative regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061424 label: positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0009383 label: rRNA (cytosine-C5-)-methyltransferase activity - SubClassOf('rRNA (cytosine-C5-)-methyltransferase activity' 'rRNA (cytosine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000067 label: NK - SubClassOf('NK' 'Lymphocytes') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031940 label: positive regulation of chromatin silencing at telomere - SubClassOf('positive regulation of chromatin silencing at telomere' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing at telomere')) - SubClassOf('positive regulation of chromatin silencing at telomere' 'positive regulation of chromatin silencing') - EquivalentClasses('positive regulation of chromatin silencing at telomere' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing at telomere') ) - SubClassOf('positive regulation of chromatin silencing at telomere' 'regulation of chromatin silencing at telomere') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006427 label: histidyl-tRNA aminoacylation - SubClassOf('histidyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') - EquivalentClasses('histidyl-tRNA aminoacylation' 'mitochondrial histidyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033434 label: AUC codon-amino acid adaptor activity - SubClassOf('AUC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0008175 label: tRNA methyltransferase activity - SubClassOf('tRNA methyltransferase activity' 'biological_process') - SubClassOf('tRNA methyltransferase activity' ObjectSomeValueFrom('part_of' 'tRNA methylation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0043197 label: dendritic spine - SubClassOf('dendritic spine' 'neuron spine') - SubClassOf('dendritic spine' ObjectSomeValueFrom('part_of' 'dendrite')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0090310 label: negative regulation of methylation-dependent chromatin silencing - SubClassOf('negative regulation of methylation-dependent chromatin silencing' ObjectSomeValueFrom('negatively_regulates' 'methylation-dependent chromatin silencing')) - SubClassOf('negative regulation of methylation-dependent chromatin silencing' 'regulation of methylation-dependent chromatin silencing') - EquivalentClasses('negative regulation of methylation-dependent chromatin silencing' ObjectSomeValueFrom('negatively_regulates' 'methylation-dependent chromatin silencing') ) - SubClassOf('negative regulation of methylation-dependent chromatin silencing' 'negative regulation of chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002943 label: tRNA dihydrouridine synthesis - SubClassOf('tRNA dihydrouridine synthesis' 'tRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0003303 label: BMP signaling pathway involved in heart jogging - SubClassOf('BMP signaling pathway involved in heart jogging' 'BMP signaling pathway involved in determination of left/right symmetry') - SubClassOf('BMP signaling pathway involved in heart jogging' 'biological_process') - SubClassOf('BMP signaling pathway involved in heart jogging' 'BMP signaling pathway involved in heart development') - EquivalentClasses('BMP signaling pathway involved in heart jogging' 'BMP signaling pathway' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_1902064 label: regulation of transcription from RNA polymerase II promoter involved in spermatogenesis - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in spermatogenesis' 'regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in spermatogenesis' 'biological_process') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in spermatogenesis' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_2000234 label: positive regulation of rRNA processing - SubClassOf('positive regulation of rRNA processing' ObjectSomeValueFrom('positively_regulates' 'rRNA processing')) - SubClassOf('positive regulation of rRNA processing' 'regulation of rRNA processing') - EquivalentClasses('positive regulation of rRNA processing' ObjectSomeValueFrom('positively_regulates' 'rRNA processing') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0045898 label: regulation of RNA polymerase II transcriptional preinitiation complex assembly - SubClassOf('regulation of RNA polymerase II transcriptional preinitiation complex assembly' 'regulation of transcription initiation from RNA polymerase II promoter') - SubClassOf('regulation of RNA polymerase II transcriptional preinitiation complex assembly' ObjectSomeValueFrom('regulates' 'RNA polymerase II transcriptional preinitiation complex assembly')) - EquivalentClasses('regulation of RNA polymerase II transcriptional preinitiation complex assembly' ObjectSomeValueFrom('regulates' 'RNA polymerase II transcriptional preinitiation complex assembly') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0007363 label: positive regulation of terminal gap gene transcription - SubClassOf('positive regulation of terminal gap gene transcription' 'regulation of transcription involved in anterior/posterior axis specification') - SubClassOf('positive regulation of terminal gap gene transcription' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001969 label: regulation of activation of membrane attack complex - SubClassOf('regulation of activation of membrane attack complex' 'regulation of complement activation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006379 label: mRNA cleavage - SubClassOf('mRNA cleavage' 'mRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001308 label: negative regulation of chromatin silencing involved in replicative cell aging - EquivalentClasses('negative regulation of chromatin silencing involved in replicative cell aging' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing') ) - SubClassOf('negative regulation of chromatin silencing involved in replicative cell aging' 'negative regulation of chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001207 label: T7_RNA_Polymerase_Promoter - SubClassOf('T7_RNA_Polymerase_Promoter' 'Phage_RNA_Polymerase_Promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0051604 label: protein maturation - SubClassOf('protein maturation' 'biological_process') - SubClassOf('protein maturation' ObjectSomeValueFrom('part_of' 'gene expression')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0045948 label: positive regulation of translational initiation - EquivalentClasses('positive regulation of translational initiation' ObjectSomeValueFrom('positively_regulates' 'translational initiation') ) - SubClassOf('positive regulation of translational initiation' ObjectSomeValueFrom('positively_regulates' 'translational initiation')) - SubClassOf('positive regulation of translational initiation' 'positive regulation of translation') - SubClassOf('positive regulation of translational initiation' 'regulation of translational initiation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043558 label: regulation of translational initiation in response to stress - SubClassOf('regulation of translational initiation in response to stress' 'regulation of translational initiation') - SubClassOf('regulation of translational initiation in response to stress' 'regulation of translation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044628 label: positive regulation of complement activation, classical pathway in other organism - SubClassOf('positive regulation of complement activation, classical pathway in other organism' 'modulation of complement activation, classical pathway in other organism') - SubClassOf('positive regulation of complement activation, classical pathway in other organism' 'positive regulation of complement activation, classical pathway') --- Class Changed: http://purl.org/obo/owl/omit#GO_2001159 label: regulation of CVT pathway - EquivalentClasses('regulation of CVT pathway' ObjectSomeValueFrom('regulates' 'CVT pathway') ) - SubClassOf('regulation of CVT pathway' ObjectSomeValueFrom('regulates' 'CVT pathway')) - SubClassOf('regulation of CVT pathway' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000605 label: intergenic_region - SubClassOf('intergenic_region' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032057 label: negative regulation of translational initiation in response to stress - SubClassOf('negative regulation of translational initiation in response to stress' 'negative regulation of translational initiation') - SubClassOf('negative regulation of translational initiation in response to stress' 'negative regulation of translation in response to stress') - SubClassOf('negative regulation of translational initiation in response to stress' 'regulation of translational initiation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000483 label: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) - SubClassOf('endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' 'endonucleolytic cleavage involved in rRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006353 label: DNA-dependent transcription, termination - EquivalentClasses('DNA-dependent transcription, termination' 'termination of mitochondrial transcription' ) - SubClassOf('DNA-dependent transcription, termination' ObjectSomeValueFrom('part_of' 'transcription, DNA-dependent')) - SubClassOf('DNA-dependent transcription, termination' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000830 label: chromosome_part - SubClassOf('chromosome_part' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001109 label: promoter clearance during DNA-dependent transcription - SubClassOf('promoter clearance during DNA-dependent transcription' ObjectSomeValueFrom('part_of' 'transcription, DNA-dependent')) - SubClassOf('promoter clearance during DNA-dependent transcription' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071255 label: CVT vesicle assembly - SubClassOf('CVT vesicle assembly' ObjectSomeValueFrom('part_of' 'CVT pathway')) - SubClassOf('CVT vesicle assembly' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_32525 label: Theria - SubClassOf('Theria' 'Mammalia') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000323 label: BoneMarrow - SubClassOf('BoneMarrow' 'HematopoieiticOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010691 label: negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to nutrient levels - SubClassOf('negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to nutrient levels' 'negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_33154 label: Opisthokonta - SubClassOf('Opisthokonta' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006422 label: aspartyl-tRNA aminoacylation - SubClassOf('aspartyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') - EquivalentClasses('aspartyl-tRNA aminoacylation' 'mitochondrial aspartyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0006349 label: regulation of gene expression by genetic imprinting - EquivalentClasses('regulation of gene expression by genetic imprinting' ObjectSomeValueFrom('results_in' 'regulation of gene expression') ) - SubClassOf('regulation of gene expression by genetic imprinting' 'regulation of gene expression, epigenetic') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071042 label: nuclear polyadenylation-dependent mRNA catabolic process - SubClassOf('nuclear polyadenylation-dependent mRNA catabolic process' 'polyadenylation-dependent mRNA catabolic process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016457 label: dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome - SubClassOf('dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome' 'dosage compensation complex assembly') - EquivalentClasses('dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome' ObjectIntersectionOf('dosage compensation complex assembly' ObjectSomeValueFrom('part_of' 'dosage compensation by hyperactivation of X chromosome')) ) - SubClassOf('dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome' ObjectSomeValueFrom('part_of' 'dosage compensation by hyperactivation of X chromosome')) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_376911 label: Strepsirrhini - SubClassOf('Strepsirrhini' 'Primates') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000377 label: RNA splicing, via transesterification reactions with bulged adenosine as nucleophile - SubClassOf('RNA splicing, via transesterification reactions with bulged adenosine as nucleophile' 'RNA splicing, via transesterification reactions') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000155 label: GlomusTumor - SubClassOf('GlomusTumor' 'ConnectiveOrigin') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001127 label: transcriptional open complex formation at bacterial-type RNA polymerase promoter - SubClassOf('transcriptional open complex formation at bacterial-type RNA polymerase promoter' ObjectSomeValueFrom('part_of' 'transcription initiation from bacterial-type RNA polymerase promoter')) - SubClassOf('transcriptional open complex formation at bacterial-type RNA polymerase promoter' 'DNA-dependent transcriptional open complex formation') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901486 label: negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process - EquivalentClasses('negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process' ObjectSomeValueFrom('results_in' 'negative regulation of SREBP signaling pathway') ) - SubClassOf('negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process' 'negative regulation of SREBP signaling pathway') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006376 label: mRNA splice site selection - SubClassOf('mRNA splice site selection' 'biological_process') - SubClassOf('mRNA splice site selection' ObjectSomeValueFrom('part_of' 'spliceosomal complex assembly')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000335 label: SkeletalMuscles - SubClassOf('SkeletalMuscles' 'MusculoskeletalOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010964 label: regulation of chromatin silencing by small RNA - SubClassOf('regulation of chromatin silencing by small RNA' 'regulation of gene silencing by RNA') - SubClassOf('regulation of chromatin silencing by small RNA' ObjectSomeValueFrom('regulates' 'chromatin silencing by small RNA')) - SubClassOf('regulation of chromatin silencing by small RNA' 'regulation of chromatin silencing') - EquivalentClasses('regulation of chromatin silencing by small RNA' ObjectSomeValueFrom('regulates' 'chromatin silencing by small RNA') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0050685 label: positive regulation of mRNA processing - SubClassOf('positive regulation of mRNA processing' 'regulation of mRNA processing') - SubClassOf('positive regulation of mRNA processing' ObjectSomeValueFrom('positively_regulates' 'mRNA processing')) - EquivalentClasses('positive regulation of mRNA processing' ObjectSomeValueFrom('positively_regulates' 'mRNA processing') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0035334 label: Notch receptor processing, ligand-independent - SubClassOf('Notch receptor processing, ligand-independent' 'protein processing') --- Class Changed: http://purl.org/obo/owl/omit#span_ProcessualContext label: processual_context - DisjointClasses('process' 'process'ualContext) - DisjointClasses('process_boundary' 'processual_context') - DisjointClasses('process_aggregate' 'processual_context') - DisjointClasses('fiat_process_part' 'processual_context') - SubClassOf('processual_context' 'processual_entity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001199 label: metal ion regulated sequence-specific DNA binding transcription factor activity - SubClassOf('metal ion regulated sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061435 label: positive regulation of transcription from a mobile element promoter - SubClassOf('positive regulation of transcription from a mobile element promoter' 'positive regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_2001163 label: regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues - SubClassOf('regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' ObjectSomeValueFrom('regulates' 'phosphorylation of RNA polymerase II C-terminal domain serine 2 residues')) - SubClassOf('regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' 'regulation of phosphorylation of RNA polymerase II C-terminal domain') - EquivalentClasses('regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' ObjectSomeValueFrom('regulates' 'phosphorylation of RNA polymerase II C-terminal domain serine 2 residues') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0036003 label: positive regulation of transcription from RNA polymerase II promoter in response to stress - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to stress' 'regulation of transcription from RNA polymerase II promoter in response to stress') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to stress' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001869 label: negative regulation of complement activation, lectin pathway - SubClassOf('negative regulation of complement activation, lectin pathway' 'negative regulation of complement activation') - SubClassOf('negative regulation of complement activation, lectin pathway' 'regulation of complement activation, lectin pathway') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070549 label: negative regulation of translation involved in RNA interference - SubClassOf('negative regulation of translation involved in RNA interference' 'negative regulation of translation, ncRNA-mediated') - SubClassOf('negative regulation of translation involved in RNA interference' ObjectSomeValueFrom('part_of' 'RNA interference')) - EquivalentClasses('negative regulation of translation involved in RNA interference' ObjectIntersectionOf('negative regulation of translation' ObjectSomeValueFrom('part_of' 'RNA interference')) ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0004882 label: androgen receptor activity - SubClassOf('androgen receptor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000296 label: origin_of_replication - SubClassOf('origin_of_replication' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006446 label: regulation of translational initiation - SubClassOf('regulation of translational initiation' ObjectSomeValueFrom('regulates' 'translational initiation')) - EquivalentClasses('regulation of translational initiation' ObjectSomeValueFrom('regulates' 'translational initiation') ) - SubClassOf('regulation of translational initiation' 'regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000409 label: binding_site - SubClassOf('binding_site' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0019084 label: (delayed) early viral mRNA transcription - SubClassOf('(delayed) early viral mRNA transcription' 'mRNA transcription') - SubClassOf('(delayed) early viral mRNA transcription' 'viral transcription') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000368 label: transposable_element_insertion_site - SubClassOf('transposable_element_insertion_site' 'insertion_site') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006617 label: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition - SubClassOf('SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition' 'biological_process') - SubClassOf('SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition' ObjectSomeValueFrom('part_of' 'SRP-dependent cotranslational protein targeting to membrane')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000200 label: ExtranodaINKTCellLymphoma - SubClassOf('ExtranodaINKTCellLymphoma' 'MatureTOrNKCellNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034225 label: regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation - SubClassOf('regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000387 label: spliceosomal snRNP assembly - SubClassOf('spliceosomal snRNP assembly' ObjectSomeValueFrom('part_of' 'mRNA splicing, via spliceosome')) - SubClassOf('spliceosomal snRNP assembly' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000164 label: Lymphangioma - SubClassOf('Lymphangioma' 'EpithelialOrigin') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070677 label: rRNA (cytosine-2'-O-)-methyltransferase activity - SubClassOf('rRNA (cytosine-2'-O-)-methyltransferase activity' 'rRNA (cytosine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000367 label: UpperRespiratoryTract - SubClassOf('UpperRespiratoryTract' 'RespiratoryOrgan') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001236 label: base - SubClassOf('base' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000095 label: leucoplast_gene - SubClassOf('leucoplast_gene' 'plastid_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001104 label: RNA polymerase II transcription cofactor activity - SubClassOf('RNA polymerase II transcription cofactor activity' 'RNA polymerase II transcription factor binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000074 label: GlialCell - SubClassOf('GlialCell' 'NerveTissueCell') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900389 label: regulation of glucose import by regulation of transcription from RNA polymerase II promoter - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of glucose import by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of glucose import by regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('regulation of glucose import by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000070 label: CD8 - SubClassOf('CD8' 'TLymphocytes') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000052 label: Organism - SubClassOf('Organism' 'object') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071049 label: nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription - SubClassOf('nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription' ObjectSomeValueFrom('part_of' 'nuclear mRNA surveillance of mRNA 3'-end processing')) - SubClassOf('nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000066 label: BLymphocytes - SubClassOf('BLymphocytes' 'Lymphocytes') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900477 label: negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter - SubClassOf('negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0003257 label: positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation - SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation' 'regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation' 'positive regulation of transcription from RNA polymerase II promoter involved in heart development') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation' 'positive regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001124 label: transcription elongation from bacterial-type RNA polymerase promoter - SubClassOf('transcription elongation from bacterial-type RNA polymerase promoter' ObjectSomeValueFrom('part_of' 'transcription from bacterial-type RNA polymerase promoter')) - SubClassOf('transcription elongation from bacterial-type RNA polymerase promoter' 'DNA-dependent transcription, elongation') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900756 label: protein processing in phagocytic vesicle - SubClassOf('protein processing in phagocytic vesicle' 'biological_process') - SubClassOf('protein processing in phagocytic vesicle' 'protein processing') - EquivalentClasses('protein processing' 'protein processing in phagocytic vesicle' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0016441 label: posttranscriptional gene silencing - SubClassOf('posttranscriptional gene silencing' 'gene silencing') - SubClassOf('posttranscriptional gene silencing' 'posttranscriptional regulation of gene expression') - SubClassOf('posttranscriptional gene silencing' 'regulation of gene expression, epigenetic') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006624 label: vacuolar protein processing - SubClassOf('vacuolar protein processing' 'biological_process') - EquivalentClasses('vacuolar protein processing' 'protein processing' ) - SubClassOf('vacuolar protein processing' 'protein processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0085032 label: modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade - SubClassOf('modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade' 'regulation of I-kappaB kinase/NF-kappaB cascade') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000129 label: gene_silenced_by_DNA_methylation - SubClassOf('gene_silenced_by_DNA_methylation' 'gene_silenced_by_DNA_modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0017055 label: negative regulation of RNA polymerase II transcriptional preinitiation complex assembly - SubClassOf('negative regulation of RNA polymerase II transcriptional preinitiation complex assembly' 'negative regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('negative regulation of RNA polymerase II transcriptional preinitiation complex assembly' ObjectSomeValueFrom('negatively_regulates' 'RNA polymerase II transcriptional preinitiation complex assembly') ) - SubClassOf('negative regulation of RNA polymerase II transcriptional preinitiation complex assembly' 'regulation of RNA polymerase II transcriptional preinitiation complex assembly') - SubClassOf('negative regulation of RNA polymerase II transcriptional preinitiation complex assembly' ObjectSomeValueFrom('negatively_regulates' 'RNA polymerase II transcriptional preinitiation complex assembly')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0044307 label: dendritic branch - SubClassOf('dendritic branch' ObjectSomeValueFrom('part_of' 'dendrite')) - SubClassOf('dendritic branch' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_314293 label: Simiiformes - SubClassOf('Simiiformes' 'Haplorrhini') --- Class Changed: http://purl.org/obo/owl/omit#snap_Site label: site - DisjointClasses('object_aggregate' 'site') - DisjointClasses('object_boundary' 'site') - DisjointClasses('object' 'site') - DisjointClasses('material_entity' 'site') - SubClassOf('site' 'independent_continuant') - DisjointClasses('fiat_object_part' 'site') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036416 label: tRNA stabilization - SubClassOf('tRNA stabilization' 'regulation of tRNA stability') - SubClassOf('tRNA stabilization' 'RNA stabilization') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001136 label: TFIIE-class transcription factor recruiting transcription factor activity - SubClassOf('TFIIE-class transcription factor recruiting transcription factor activity' 'RNA polymerase II transcription factor recruiting transcription factor activity') - SubClassOf('TFIIE-class transcription factor recruiting transcription factor activity' 'TFIIE-class binding transcription factor activity') - SubClassOf('TFIIE-class transcription factor recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase II transcriptional preinitiation complex assembly')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0070934 label: CRD-mediated mRNA stabilization - SubClassOf('CRD-mediated mRNA stabilization' 'mRNA stabilization') --- Class Changed: http://purl.org/obo/owl/omit#GO_0052665 label: tRNA (uracil-2'-O-)-methyltransferase activity - SubClassOf('tRNA (uracil-2'-O-)-methyltransferase activity' 'tRNA (uracil) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070125 label: mitochondrial translational elongation - SubClassOf('mitochondrial translational elongation' 'translational elongation') - EquivalentClasses('translational elongation' 'mitochondrial translational elongation' ) - SubClassOf('mitochondrial translational elongation' ObjectSomeValueFrom('part_of' 'mitochondrial translation')) - SubClassOf('mitochondrial translational elongation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006343 label: establishment of chromatin silencing - SubClassOf('establishment of chromatin silencing' ObjectSomeValueFrom('part_of' 'chromatin silencing')) - SubClassOf('establishment of chromatin silencing' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006356 label: regulation of transcription from RNA polymerase I promoter - SubClassOf('regulation of transcription from RNA polymerase I promoter' 'regulation of transcription, DNA-dependent') - EquivalentClasses('regulation of transcription from RNA polymerase I promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase I promoter') ) - EquivalentClasses('regulation of transcription from RNA polymerase I promoter' 'regulation of transcription from RNA polymerase I promoter, mitotic' ) - SubClassOf('regulation of transcription from RNA polymerase I promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase I promoter')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0001640 label: RNase_MRP_RNA_gene - SubClassOf('RNase_MRP_RNA_gene' 'ncRNA_gene') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000654 label: maxicircle_gene - SubClassOf('maxicircle_gene' 'kinetoplast_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0072362 label: regulation of glycolysis by negative regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of glycolysis by negative regulation of transcription from RNA polymerase II promoter' 'regulation of glycolysis by regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of glycolysis by negative regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase II promoter') ) - SubClassOf('regulation of glycolysis by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046023 label: regulation of transcription from RNA polymerase III promoter, mitotic - EquivalentClasses('regulation of transcription from RNA polymerase III promoter' 'regulation of transcription from RNA polymerase III promoter, mitotic' ) - SubClassOf('regulation of transcription from RNA polymerase III promoter, mitotic' 'regulation of transcription from RNA polymerase III promoter') - SubClassOf('regulation of transcription from RNA polymerase III promoter, mitotic' 'regulation of transcription during mitosis') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001184 label: promoter clearance from RNA polymerase I promoter for nuclear large rRNA transcript - SubClassOf('promoter clearance from RNA polymerase I promoter for nuclear large rRNA transcript' 'promoter clearance from RNA polymerase I promoter') - SubClassOf('promoter clearance from RNA polymerase I promoter for nuclear large rRNA transcript' ObjectSomeValueFrom('part_of' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0035103 label: sterol regulatory element binding protein cleavage - SubClassOf('sterol regulatory element binding protein cleavage' 'protein processing') - SubClassOf('sterol regulatory element binding protein cleavage' ObjectSomeValueFrom('part_of' 'SREBP signaling pathway')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000346 label: SomaticNervousSystem - SubClassOf('SomaticNervousSystem' 'PeripheralNervousSystem') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035194 label: posttranscriptional gene silencing by RNA - SubClassOf('posttranscriptional gene silencing by RNA' 'gene silencing by RNA') - SubClassOf('posttranscriptional gene silencing by RNA' 'posttranscriptional gene silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901409 label: positive regulation of phosphorylation of RNA polymerase II C-terminal domain - EquivalentClasses('positive regulation of phosphorylation of RNA polymerase II C-terminal domain' ObjectSomeValueFrom('positively_regulates' 'phosphorylation of RNA polymerase II C-terminal domain') ) - SubClassOf('positive regulation of phosphorylation of RNA polymerase II C-terminal domain' 'regulation of phosphorylation of RNA polymerase II C-terminal domain') - SubClassOf('positive regulation of phosphorylation of RNA polymerase II C-terminal domain' ObjectSomeValueFrom('positively_regulates' 'phosphorylation of RNA polymerase II C-terminal domain')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000170 label: RNApol_II_promoter - SubClassOf('RNApol_II_promoter' 'RNA_polymerase_promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001065 label: mitochondrial single subunit type RNA polymerase activity - SubClassOf('mitochondrial single subunit type RNA polymerase activity' 'biological_process') - SubClassOf('mitochondrial single subunit type RNA polymerase activity' ObjectSomeValueFrom('part_of' 'transcription from mitochondrial promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0030969 label: UFP-specific transcription factor mRNA processing involved in endoplasmic reticulum unfolded protein response - SubClassOf('UFP-specific transcription factor mRNA processing involved in endoplasmic reticulum unfolded protein response' 'mRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0003434 label: BMP signaling pathway involved in growth plate cartilage chondrocyte development - SubClassOf('BMP signaling pathway involved in growth plate cartilage chondrocyte development' 'BMP signaling pathway') - SubClassOf('BMP signaling pathway involved in growth plate cartilage chondrocyte development' 'biological_process') - EquivalentClasses('BMP signaling pathway involved in growth plate cartilage chondrocyte development' 'BMP signaling pathway' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001081 label: nitrogen catabolite repression of transcription from RNA polymerase II promoter - SubClassOf('nitrogen catabolite repression of transcription from RNA polymerase II promoter' 'nitrogen catabolite regulation of transcription from RNA polymerase II promoter') - SubClassOf('nitrogen catabolite repression of transcription from RNA polymerase II promoter' 'nitrogen catabolite repression of transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001112 label: DNA-dependent transcriptional open complex formation - SubClassOf('DNA-dependent transcriptional open complex formation' 'biological_process') - SubClassOf('DNA-dependent transcriptional open complex formation' ObjectSomeValueFrom('part_of' 'DNA-dependent transcription, initiation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0071432 label: peptide mating pheromone maturation involved in conjugation with cellular fusion - SubClassOf('peptide mating pheromone maturation involved in conjugation with cellular fusion' 'peptide pheromone maturation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097201 label: negative regulation of transcription from RNA polymerase II promoter in response to stress - SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to stress' 'negative regulation of transcription from RNA polymerase II promoter') - SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to stress' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033441 label: AAU codon-amino acid adaptor activity - SubClassOf('AAU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001034 label: sequence-specific DNA binding RNA polymerase III transcription factor activity - SubClassOf('sequence-specific DNA binding RNA polymerase III transcription factor activity' 'sequence-specific DNA binding transcription factor activity') - SubClassOf('sequence-specific DNA binding RNA polymerase III transcription factor activity' ObjectSomeValueFrom('part_of' 'regulation of transcription from RNA polymerase III promoter')) - SubClassOf('sequence-specific DNA binding RNA polymerase III transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0090309 label: positive regulation of methylation-dependent chromatin silencing - SubClassOf('positive regulation of methylation-dependent chromatin silencing' 'regulation of methylation-dependent chromatin silencing') - SubClassOf('positive regulation of methylation-dependent chromatin silencing' 'positive regulation of chromatin silencing') - EquivalentClasses('positive regulation of methylation-dependent chromatin silencing' ObjectSomeValueFrom('positively_regulates' 'methylation-dependent chromatin silencing') ) - SubClassOf('positive regulation of methylation-dependent chromatin silencing' ObjectSomeValueFrom('positively_regulates' 'methylation-dependent chromatin silencing')) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_9605 label: Homo - SubClassOf('Homo' 'Homininae') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070898 label: RNA polymerase III transcriptional preinitiation complex assembly - SubClassOf('RNA polymerase III transcriptional preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase III promoter')) - SubClassOf('RNA polymerase III transcriptional preinitiation complex assembly' 'DNA-dependent transcriptional preinitiation complex assembly') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043144 label: snoRNA processing - SubClassOf('snoRNA processing' 'ncRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900403 label: negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter - SubClassOf('negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000233 label: mature_transcript - SubClassOf('mature_transcript' ObjectSomeValueFrom('derives_from' 'primary_transcript')) - SubClassOf('mature_transcript' 'transcript') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006390 label: transcription from mitochondrial promoter - SubClassOf('transcription from mitochondrial promoter' 'biological_process') - EquivalentClasses('transcription, DNA-dependent' 'transcription from mitochondrial promoter' ) - SubClassOf('transcription from mitochondrial promoter' 'transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006451 label: translational readthrough - SubClassOf('translational readthrough' 'translational elongation') - SubClassOf('translational readthrough' 'regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071030 label: nuclear mRNA surveillance of spliceosomal pre-mRNA splicing - SubClassOf('nuclear mRNA surveillance of spliceosomal pre-mRNA splicing' ObjectSomeValueFrom('has_part' 'nuclear polyadenylation-dependent mRNA catabolic process')) - SubClassOf('nuclear mRNA surveillance of spliceosomal pre-mRNA splicing' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035955 label: negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter - EquivalentClasses('negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase II promoter') ) - SubClassOf('negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of oligopeptide transport by negative regulation of transcription from RNA polymerase II promoter') - SubClassOf('negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter' 'regulation of dipeptide transport by regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070133 label: negative regulation of mitochondrial translational initiation - EquivalentClasses('negative regulation of mitochondrial translational initiation' ObjectSomeValueFrom('negatively_regulates' 'mitochondrial translational initiation') ) - SubClassOf('negative regulation of mitochondrial translational initiation' ObjectSomeValueFrom('negatively_regulates' 'mitochondrial translational initiation')) - SubClassOf('negative regulation of mitochondrial translational initiation' 'regulation of mitochondrial translational initiation') - SubClassOf('negative regulation of mitochondrial translational initiation' 'negative regulation of translational initiation') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000584 label: tmRNA - SubClassOf('tmRNA' 'small_regulatory_ncRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0051391 label: tRNA acetylation - SubClassOf('tRNA acetylation' 'tRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001057 label: RNA polymerase IV activity - SubClassOf('RNA polymerase IV activity' 'biological_process') - EquivalentClasses('RNA polymerase IV activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase IV promoter') ) - SubClassOf('RNA polymerase IV activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase IV promoter')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000142 label: DigestiveSystemDisease - SubClassOf('DigestiveSystemDisease' 'OrganSystemDisease') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097414 label: classical Lewy body - SubClassOf('classical Lewy body' 'Lewy body') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000368 label: Bronchi - SubClassOf('Bronchi' 'LowerRespiratoryTract') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002195 label: 2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine-tRNA biosynthesis - SubClassOf('2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine-tRNA biosynthesis' 'tRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000451 label: rRNA 2'-O-methylation - SubClassOf('rRNA 2'-O-methylation' 'rRNA methylation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000186 label: MixedCellularityHL - SubClassOf('MixedCellularityHL' 'HodgkinLymphoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900404 label: positive regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('positive regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('positive regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030847 label: termination of RNA polymerase II transcription, exosome-dependent - SubClassOf('termination of RNA polymerase II transcription, exosome-dependent' 'termination of RNA polymerase II transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001041 label: transcription from a RNA polymerase III hybrid type promoter - SubClassOf('transcription from a RNA polymerase III hybrid type promoter' 'transcription from RNA polymerase III promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0008588 label: release of cytoplasmic sequestered NF-kappaB - SubClassOf('release of cytoplasmic sequestered NF-kappaB' 'positive regulation of NF-kappaB import into nucleus') - SubClassOf('release of cytoplasmic sequestered NF-kappaB' ObjectSomeValueFrom('negatively_regulates' 'cytoplasmic sequestering of NF-kappaB')) - SubClassOf('release of cytoplasmic sequestered NF-kappaB' ObjectSomeValueFrom('part_of' 'I-kappaB kinase/NF-kappaB cascade')) --- Class Changed: http://purl.org/obo/owl/omit#GO_1900364 label: negative regulation of mRNA polyadenylation - SubClassOf('negative regulation of mRNA polyadenylation' 'regulation of mRNA polyadenylation') - SubClassOf('negative regulation of mRNA polyadenylation' 'negative regulation of mRNA 3'-end processing') - EquivalentClasses('negative regulation of mRNA polyadenylation' ObjectSomeValueFrom('negatively_regulates' 'mRNA polyadenylation') ) - SubClassOf('negative regulation of mRNA polyadenylation' ObjectSomeValueFrom('negatively_regulates' 'mRNA polyadenylation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0045182 label: translation regulator activity - SubClassOf('translation regulator activity' ObjectSomeValueFrom('part_of' 'regulation of translation')) - SubClassOf('translation regulator activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033410 label: UAC codon-amino acid adaptor activity - SubClassOf('UAC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035961 label: positive regulation of ergosterol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of ergosterol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of ergosterol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) - SubClassOf('positive regulation of ergosterol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070149 label: mitochondrial glutamyl-tRNA aminoacylation - SubClassOf('mitochondrial glutamyl-tRNA aminoacylation' 'glutamyl-tRNA aminoacylation') - EquivalentClasses('glutamyl-tRNA aminoacylation' 'mitochondrial glutamyl-tRNA aminoacylation' ) - SubClassOf('mitochondrial glutamyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901227 label: negative regulation of transcription from RNA polymerase II promoter involved in heart development - SubClassOf('negative regulation of transcription from RNA polymerase II promoter involved in heart development' 'negative regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter involved in heart development' ) - SubClassOf('negative regulation of transcription from RNA polymerase II promoter involved in heart development' 'regulation of transcription from RNA polymerase II promoter involved in heart development') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000234 label: ImmunosuppressiveTherapy - SubClassOf('ImmunosuppressiveTherapy' 'PharmaceuticalTreatment') --- Class Changed: http://purl.org/obo/owl/omit#GO_0008150 label: biological_process - DisjointClasses('cellular_component' 'biological_process') - SubClassOf('biological_process' 'process') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000287 label: HepaticPortalVein - SubClassOf('HepaticPortalVein' 'Vein') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034477 label: U6 snRNA 3'-end processing - SubClassOf('U6 snRNA 3'-end processing' 'snRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001021 label: RNA polymerase III type 2 promoter transcriptional preinitiation complex assembly - SubClassOf('RNA polymerase III type 2 promoter transcriptional preinitiation complex assembly' 'RNA polymerase III transcriptional preinitiation complex assembly') - SubClassOf('RNA polymerase III type 2 promoter transcriptional preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase III type 2 promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_1900095 label: regulation of dosage compensation by inactivation of X chromosome - SubClassOf('regulation of dosage compensation by inactivation of X chromosome' 'biological_process') - SubClassOf('regulation of dosage compensation by inactivation of X chromosome' ObjectSomeValueFrom('regulates' 'dosage compensation by inactivation of X chromosome')) - EquivalentClasses('regulation of dosage compensation by inactivation of X chromosome' ObjectSomeValueFrom('regulates' 'dosage compensation by inactivation of X chromosome') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0006369 label: termination of RNA polymerase II transcription - SubClassOf('termination of RNA polymerase II transcription' 'DNA-dependent transcription, termination') - SubClassOf('termination of RNA polymerase II transcription' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033439 label: ACA codon-amino acid adaptor activity - SubClassOf('ACA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000174 label: MyelodysplasticSyndromes - SubClassOf('MyelodysplasticSyndromes' 'LeukemiaAndLymphoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070040 label: rRNA (adenine-C2-)-methyltransferase activity - SubClassOf('rRNA (adenine-C2-)-methyltransferase activity' 'rRNA (adenine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000185 label: primary_transcript - SubClassOf('primary_transcript' 'transcript') --- Class Changed: http://purl.org/obo/owl/omit#GO_0009386 label: translational attenuation - SubClassOf('translational attenuation' 'regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000247 label: EndocrineOrgan - SubClassOf('EndocrineOrgan' 'AnatomicFeature') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036265 label: RNA (guanine-N7)-methylation - SubClassOf('RNA (guanine-N7)-methylation' ObjectSomeValueFrom('part_of' '7-methylguanosine RNA capping')) - SubClassOf('RNA (guanine-N7)-methylation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901487 label: negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process in response to increased oxygen levels - EquivalentClasses('negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process in response to increased oxygen levels' ObjectSomeValueFrom('results_in' 'negative regulation of SREBP signaling pathway in response to increased oxygen levels') ) - SubClassOf('negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process in response to increased oxygen levels' 'negative regulation of SREBP signaling pathway in response to increased oxygen levels') - SubClassOf('negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process in response to increased oxygen levels' 'negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000359 label: Endometrium - SubClassOf('Endometrium' 'Uterus') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001060 label: transcription from RNA polymerase V promoter - SubClassOf('transcription from RNA polymerase V promoter' 'transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071262 label: regulation of translational initiation in response to starvation - SubClassOf('regulation of translational initiation in response to starvation' 'regulation of translational initiation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090308 label: regulation of methylation-dependent chromatin silencing - SubClassOf('regulation of methylation-dependent chromatin silencing' 'regulation of chromatin silencing') - SubClassOf('regulation of methylation-dependent chromatin silencing' ObjectSomeValueFrom('regulates' 'methylation-dependent chromatin silencing')) - EquivalentClasses('regulation of methylation-dependent chromatin silencing' ObjectSomeValueFrom('regulates' 'methylation-dependent chromatin silencing') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0071430 label: pre-miRNA-containing ribonucleoprotein complex export from nucleus - SubClassOf('pre-miRNA-containing ribonucleoprotein complex export from nucleus' ObjectSomeValueFrom('has_part' 'pre-miRNA export from nucleus')) - SubClassOf('pre-miRNA-containing ribonucleoprotein complex export from nucleus' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000084 label: OncoGeneratingMiRNA - SubClassOf('OncoGeneratingMiRNA' 'miRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043488 label: regulation of mRNA stability - SubClassOf('regulation of mRNA stability' 'regulation of RNA stability') - EquivalentClasses('regulation of mRNA stability involved in response to stress' 'regulation of mRNA stability' ) - EquivalentClasses('regulation of mRNA stability' 'regulation of mRNA stability involved in response to oxidative stress' ) --- Class Changed: http://purl.org/obo/owl/omit#span_ProcessualEntity label: processual_entity - SubClassOf('processual_entity' 'occurrent') - DisjointClasses('processual_entity' 'spatiotemporal_region') - DisjointClasses('processual_entity' 'temporal_region') - EquivalentClasses('process'ualEntity ObjectUnionOf('fiat_process_part' 'process' 'process'Aggregate 'process'Boundary 'process'ualContext) ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000483 label: Bacteria - SubClassOf('Bacteria' 'CellularOrganism') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000376 label: RNA splicing, via transesterification reactions with guanosine as nucleophile - SubClassOf('RNA splicing, via transesterification reactions with guanosine as nucleophile' 'RNA splicing, via transesterification reactions') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033267 label: axon part - EquivalentClasses('axon part' ObjectIntersectionOf('cellular_component' ObjectSomeValueFrom('part_of' 'axon')) ) - SubClassOf('axon part' 'neuron part') - SubClassOf('axon part' ObjectSomeValueFrom('part_of' 'axon')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0044327 label: dendritic spine head - SubClassOf('dendritic spine head' ObjectSomeValueFrom('part_of' 'dendritic spine')) - SubClassOf('dendritic spine head' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006367 label: transcription initiation from RNA polymerase II promoter - SubClassOf('transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter')) - SubClassOf('transcription initiation from RNA polymerase II promoter' 'DNA-dependent transcription, initiation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0003155 label: BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry - EquivalentClasses('BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'BMP signaling pathway' ) - SubClassOf('BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'biological_process') - SubClassOf('BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'BMP signaling pathway involved in determination of left/right symmetry') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001125 label: transcription termination from bacterial-type RNA polymerase promoter - SubClassOf('transcription termination from bacterial-type RNA polymerase promoter' ObjectSomeValueFrom('part_of' 'transcription from bacterial-type RNA polymerase promoter')) - SubClassOf('transcription termination from bacterial-type RNA polymerase promoter' 'DNA-dependent transcription, termination') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001219 label: retrogene - SubClassOf('retrogene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044326 label: dendritic spine neck - SubClassOf('dendritic spine neck' ObjectSomeValueFrom('part_of' 'dendritic spine')) - SubClassOf('dendritic spine neck' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000197 label: SmallLymphocyticLymphomaChronicLymphocyticLeukemia - SubClassOf('SmallLymphocyticLymphomaChronicLymphocyticLeukemia' 'MatureBCellNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000697 label: gene_with_stop_codon_read_through - SubClassOf('gene_with_stop_codon_read_through' 'gene_with_recoded_mRNA') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000239 label: flanking_region - SubClassOf('flanking_region' 'topologically_defined_region') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_7742 label: Vertebrata - SubClassOf('Vertebrata' 'Craniata') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006385 label: transcription elongation from RNA polymerase III promoter - SubClassOf('transcription elongation from RNA polymerase III promoter' 'DNA-dependent transcription, elongation') - SubClassOf('transcription elongation from RNA polymerase III promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_1990141 label: chromatin silencing at centromere outer repeat region - SubClassOf('chromatin silencing at centromere outer repeat region' 'chromatin silencing at centromere') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000233 label: Chemotherapy - SubClassOf('Chemotherapy' 'PharmaceuticalTreatment') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002101 label: tRNA wobble cytosine modification - SubClassOf('tRNA wobble cytosine modification' 'tRNA wobble base modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001228 label: RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription - SubClassOf('RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' ObjectSomeValueFrom('part_of' 'positive regulation of transcription from RNA polymerase II promoter')) - SubClassOf('RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' 'sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000631 label: regulation of pre-miRNA processing - SubClassOf('regulation of pre-miRNA processing' ObjectSomeValueFrom('regulates' 'pre-miRNA processing')) - SubClassOf('regulation of pre-miRNA processing' 'regulation of gene silencing by miRNA') - EquivalentClasses('regulation of pre-miRNA processing' ObjectSomeValueFrom('regulates' 'pre-miRNA processing') ) - SubClassOf('regulation of pre-miRNA processing' 'regulation of production of small RNA involved in gene silencing by RNA') --- Class Changed: http://purl.org/obo/owl/omit#SO_1000036 label: inversion - SubClassOf('inversion' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000483 label: nc_primary_transcript - SubClassOf('nc_primary_transcript' 'primary_transcript') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001431 label: cryptic_gene - SubClassOf('cryptic_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000222 label: SolidPulmonaryAdenocarcinoma - SubClassOf('SolidPulmonaryAdenocarcinoma' 'PulmonaryAdenocarcinoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039611 label: suppression by virus of host translation initiation factor activity - SubClassOf('suppression by virus of host translation initiation factor activity' 'suppression by virus of host translation initiation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000091 label: Virus - SubClassOf('Virus' 'Organism') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000256 label: Artery - SubClassOf('Artery' 'CardiovascularFeature') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044027 label: hypermethylation of CpG island - SubClassOf('hypermethylation of CpG island' 'DNA hypermethylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002003 label: angiotensin maturation - SubClassOf('angiotensin maturation' 'peptide hormone processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097445 label: presynaptic active zone dense projection - SubClassOf('presynaptic active zone dense projection' ObjectSomeValueFrom('part_of' 'presynaptic active zone')) - SubClassOf('presynaptic active zone dense projection' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900176 label: negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry - SubClassOf('negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry') - SubClassOf('negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'negative regulation of nodal signaling pathway involved in determination of left/right asymmetry') - SubClassOf('negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' ObjectSomeValueFrom('negatively_regulates' 'nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry')) - EquivalentClasses('negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' ObjectSomeValueFrom('negatively_regulates' 'nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001072 label: RNA binding transcription antitermination factor activity - SubClassOf('RNA binding transcription antitermination factor activity' ObjectSomeValueFrom('part_of' 'transcription antitermination')) - SubClassOf('RNA binding transcription antitermination factor activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000378 label: DsrA_RNA - SubClassOf('DsrA_RNA' 'small_regulatory_ncRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0051091 label: positive regulation of sequence-specific DNA binding transcription factor activity - SubClassOf('positive regulation of sequence-specific DNA binding transcription factor activity' 'regulation of sequence-specific DNA binding transcription factor activity') - EquivalentClasses('positive regulation of sequence-specific DNA binding transcription factor activity' ObjectSomeValueFrom('positively_regulates' 'sequence-specific DNA binding transcription factor activity') ) - SubClassOf('positive regulation of sequence-specific DNA binding transcription factor activity' ObjectSomeValueFrom('positively_regulates' 'sequence-specific DNA binding transcription factor activity')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0032258 label: CVT pathway - SubClassOf('CVT pathway' ObjectSomeValueFrom('has_part' 'vacuolar protein processing')) - SubClassOf('CVT pathway' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061429 label: positive regulation of transcription from RNA polymerase II promoter by oleic acid - SubClassOf('positive regulation of transcription from RNA polymerase II promoter by oleic acid' 'carbon catabolite activation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter by oleic acid' 'positive regulation of transcription by oleic acid') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900525 label: positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of phospholipid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001217 label: sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription - SubClassOf('sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription' ObjectSomeValueFrom('part_of' 'negative regulation of transcription, DNA-dependent')) - SubClassOf('sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription' 'sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046780 label: suppression by virus of host mRNA splicing - SubClassOf('suppression by virus of host mRNA splicing' 'suppression by virus of host mRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045892 label: negative regulation of transcription, DNA-dependent - SubClassOf('negative regulation of transcription, DNA-dependent' 'negative regulation of gene expression') - SubClassOf('negative regulation of transcription, DNA-dependent' ObjectSomeValueFrom('negatively_regulates' 'transcription, DNA-dependent')) - SubClassOf('negative regulation of transcription, DNA-dependent' 'regulation of transcription, DNA-dependent') - EquivalentClasses('negative regulation of transcription, DNA-dependent' 'negative regulation of transcription involved in G2/M transition of mitotic cell cycle' ) - EquivalentClasses('negative regulation of transcription, DNA-dependent' ObjectSomeValueFrom('negatively_regulates' 'transcription, DNA-dependent') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0097413 label: Lewy body - SubClassOf('Lewy body' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_339960 label: Katablepharidophyta - SubClassOf('Katablepharidophyta' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#GO_0004809 label: tRNA (guanine-N2-)-methyltransferase activity - SubClassOf('tRNA (guanine-N2-)-methyltransferase activity' 'tRNA (guanine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033440 label: ACG codon-amino acid adaptor activity - SubClassOf('ACG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090019 label: regulation of transcription involved in anterior neural plate formation - SubClassOf('regulation of transcription involved in anterior neural plate formation' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in anterior neural plate formation' ) - SubClassOf('regulation of transcription involved in anterior neural plate formation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0004479 label: methionyl-tRNA formyltransferase activity - SubClassOf('methionyl-tRNA formyltransferase activity' 'biological_process') - SubClassOf('methionyl-tRNA formyltransferase activity' ObjectSomeValueFrom('part_of' 'conversion of methionyl-tRNA to N-formyl-methionyl-tRNA')) - SubClassOf('methionyl-tRNA formyltransferase activity' ObjectSomeValueFrom('part_of' 'translational initiation')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000018 label: linkage_group - SubClassOf('linkage_group' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000809 label: NegativeStrandInsertion - SubClassOf('NegativeStrandInsertion' 'TEInsertion') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001111 label: promoter clearance from RNA polymerase II promoter - SubClassOf('promoter clearance from RNA polymerase II promoter' 'promoter clearance during DNA-dependent transcription') - SubClassOf('promoter clearance from RNA polymerase II promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000106 label: Bone - SubClassOf('Bone' 'ConnectiveTissue') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000731 label: negative regulation of termination of RNA polymerase I transcription - SubClassOf('negative regulation of termination of RNA polymerase I transcription' 'regulation of termination of RNA polymerase I transcription') - SubClassOf('negative regulation of termination of RNA polymerase I transcription' ObjectSomeValueFrom('negatively_regulates' 'termination of RNA polymerase I transcription')) - SubClassOf('negative regulation of termination of RNA polymerase I transcription' 'negative regulation of DNA-dependent transcription, termination') - EquivalentClasses('negative regulation of termination of RNA polymerase I transcription' ObjectSomeValueFrom('negatively_regulates' 'termination of RNA polymerase I transcription') ) --- Class Changed: http://purl.org/obo/owl/omit#SO_0001869 label: functional_candidate_gene - SubClassOf('functional_candidate_gene' 'candidate_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045957 label: negative regulation of complement activation, alternative pathway - SubClassOf('negative regulation of complement activation, alternative pathway' 'regulation of complement activation, alternative pathway') - SubClassOf('negative regulation of complement activation, alternative pathway' 'negative regulation of complement activation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033268 label: node of Ranvier - SubClassOf('node of Ranvier' 'axon part') - SubClassOf('node of Ranvier' ObjectSomeValueFrom('part_of' 'main axon')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0044630 label: modulation of complement activation, lectin pathway in other organism - SubClassOf('modulation of complement activation, lectin pathway in other organism' 'regulation of complement activation, lectin pathway') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044226 label: basal pole of neuron - SubClassOf('basal pole of neuron' ObjectSomeValueFrom('part_of' 'neuronal cell body')) - SubClassOf('basal pole of neuron' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001235 label: replicon - SubClassOf('replicon' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000373 label: Pharynx - SubClassOf('Pharynx' 'UpperRespiratoryTract') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045904 label: negative regulation of translational termination - SubClassOf('negative regulation of translational termination' 'negative regulation of translation') - SubClassOf('negative regulation of translational termination' ObjectSomeValueFrom('negatively_regulates' 'translational termination')) - SubClassOf('negative regulation of translational termination' 'regulation of translational termination') - EquivalentClasses('negative regulation of translational termination' ObjectSomeValueFrom('negatively_regulates' 'translational termination') ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000209 label: MalignantMesothelioma - SubClassOf('MalignantMesothelioma' 'Carcinoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_2001124 label: regulation of translational frameshifting - EquivalentClasses('regulation of translational frameshifting' ObjectSomeValueFrom('regulates' 'translational frameshifting') ) - SubClassOf('regulation of translational frameshifting' ObjectSomeValueFrom('regulates' 'translational frameshifting')) - SubClassOf('regulation of translational frameshifting' 'regulation of translational elongation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002942 label: tRNA m2,2-guanine biosynthesis - SubClassOf('tRNA m2,2-guanine biosynthesis' 'tRNA methylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097441 label: basilar dendrite - SubClassOf('basilar dendrite' 'dendrite') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033427 label: CAA codon-amino acid adaptor activity - SubClassOf('CAA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_1001275 label: retron - SubClassOf('retron' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_117570 label: Teleostomi - SubClassOf('Teleostomi' 'Gnathostomata') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010599 label: production of lsiRNA involved in RNA interference - SubClassOf('production of lsiRNA involved in RNA interference' ObjectSomeValueFrom('part_of' 'RNA interference')) - SubClassOf('production of lsiRNA involved in RNA interference' 'production of small RNA involved in gene silencing by RNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000463 label: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - SubClassOf('maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'maturation of LSU-rRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070918 label: production of small RNA involved in gene silencing by RNA - SubClassOf('production of small RNA involved in gene silencing by RNA' ObjectSomeValueFrom('part_of' 'gene silencing by RNA')) - SubClassOf('production of small RNA involved in gene silencing by RNA' 'dsRNA fragmentation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001027 label: RNA polymerase III type 1 promoter TFIIIB-type transcription factor activity - SubClassOf('RNA polymerase III type 1 promoter TFIIIB-type transcription factor activity' 'TFIIIB-type transcription factor activity') - SubClassOf('RNA polymerase III type 1 promoter TFIIIB-type transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III type 1 promoter transcriptional preinitiation complex assembly')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0051123 label: RNA polymerase II transcriptional preinitiation complex assembly - SubClassOf('RNA polymerase II transcriptional preinitiation complex assembly' 'DNA-dependent transcriptional preinitiation complex assembly') - SubClassOf('RNA polymerase II transcriptional preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000171 label: ChronicMyeloproliferativeDisorders - SubClassOf('ChronicMyeloproliferativeDisorders' 'LeukemiaAndLymphoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032056 label: positive regulation of translation in response to stress - SubClassOf('positive regulation of translation in response to stress' 'positive regulation of translation') - SubClassOf('positive regulation of translation in response to stress' 'regulation of translation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032938 label: negative regulation of translation in response to oxidative stress - SubClassOf('negative regulation of translation in response to oxidative stress' 'negative regulation of translation in response to stress') - SubClassOf('negative regulation of translation in response to oxidative stress' 'regulation of translation in response to oxidative stress') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_7898 label: Actinopterygii - SubClassOf('Actinopterygii' 'Euteleostomi') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034963 label: box C/D snoRNA processing - SubClassOf('box C/D snoRNA processing' 'snoRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0040029 label: regulation of gene expression, epigenetic - SubClassOf('regulation of gene expression, epigenetic' 'regulation of gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060803 label: BMP signaling pathway involved in mesodermal cell fate specification - EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in mesodermal cell fate specification' ) - SubClassOf('BMP signaling pathway involved in mesodermal cell fate specification' 'regulation of transcription involved in primary germ layer cell fate commitment') - SubClassOf('BMP signaling pathway involved in mesodermal cell fate specification' 'BMP signaling pathway') --- Class Changed: http://purl.org/obo/owl/omit#GO_0072365 label: regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter - EquivalentClasses('regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase II promoter') ) - SubClassOf('regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010468 label: regulation of gene expression - SubClassOf('regulation of gene expression' 'biological_process') - EquivalentClasses('regulation of gene expression' ObjectSomeValueFrom('regulates' 'gene expression') ) - SubClassOf('regulation of gene expression' ObjectSomeValueFrom('regulates' 'gene expression')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0061187 label: regulation of chromatin silencing at rDNA - EquivalentClasses('regulation of chromatin silencing at rDNA' ObjectSomeValueFrom('regulates' 'chromatin silencing at rDNA') ) - SubClassOf('regulation of chromatin silencing at rDNA' 'regulation of chromatin silencing') - SubClassOf('regulation of chromatin silencing at rDNA' ObjectSomeValueFrom('regulates' 'chromatin silencing at rDNA')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000433 label: negative regulation of transcription from RNA polymerase II promoter by glucose - SubClassOf('negative regulation of transcription from RNA polymerase II promoter by glucose' 'carbon catabolite repression of transcription from RNA polymerase II promoter') - SubClassOf('negative regulation of transcription from RNA polymerase II promoter by glucose' 'negative regulation of transcription by glucose') - SubClassOf('negative regulation of transcription from RNA polymerase II promoter by glucose' 'regulation of transcription from RNA polymerase II promoter by glucose') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000352 label: FemaleReproductiveSystem - SubClassOf('FemaleReproductiveSystem' 'ReproductiveOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031554 label: regulation of DNA-dependent transcription, termination - SubClassOf('regulation of DNA-dependent transcription, termination' 'regulation of transcription, DNA-dependent') - SubClassOf('regulation of DNA-dependent transcription, termination' ObjectSomeValueFrom('regulates' 'DNA-dependent transcription, termination')) - EquivalentClasses('regulation of DNA-dependent transcription, termination' ObjectSomeValueFrom('regulates' 'DNA-dependent transcription, termination') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0006397 label: mRNA processing - SubClassOf('mRNA processing' 'RNA processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000184 label: LymphocytePredominanceHL - SubClassOf('LymphocytePredominanceHL' 'HodgkinLymphoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031050 label: dsRNA fragmentation - SubClassOf('dsRNA fragmentation' 'RNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097428 label: protein maturation by iron-sulfur cluster transfer - SubClassOf('protein maturation by iron-sulfur cluster transfer' 'protein maturation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044542 label: plasminogen activation in other organism - SubClassOf('plasminogen activation in other organism' 'plasminogen activation') - SubClassOf('plasminogen activation in other organism' 'zymogen activation in other organism') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000094 label: cyanelle_gene - SubClassOf('cyanelle_gene' 'plastid_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033428 label: CAG codon-amino acid adaptor activity - SubClassOf('CAG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034470 label: ncRNA processing - SubClassOf('ncRNA processing' 'RNA processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000328 label: LymphNodes - SubClassOf('LymphNodes' 'LymphaticOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0038098 label: sequestering of BMP from receptor via BMP binding - SubClassOf('sequestering of BMP from receptor via BMP binding' 'negative regulation of BMP signaling pathway') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034475 label: U4 snRNA 3'-end processing - SubClassOf('U4 snRNA 3'-end processing' 'snRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001867 label: candidate_gene - SubClassOf('candidate_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000220 label: MixedPulmonaryAdenocarcinoma - SubClassOf('MixedPulmonaryAdenocarcinoma' 'PulmonaryAdenocarcinoma') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000816 label: rescue_gene - SubClassOf('rescue_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033403 label: UUA codon-amino acid adaptor activity - SubClassOf('UUA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033452 label: GUG codon-amino acid adaptor activity - SubClassOf('GUG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045916 label: negative regulation of complement activation - SubClassOf('negative regulation of complement activation' 'regulation of complement activation') - SubClassOf('negative regulation of complement activation' 'negative regulation of protein processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0023019 label: signal transduction involved in regulation of gene expression - SubClassOf('signal transduction involved in regulation of gene expression' ObjectSomeValueFrom('part_of' 'regulation of gene expression')) - EquivalentClasses('signal transduction involved in regulation of gene expression' ObjectSomeValueFrom('part_of' 'regulation of gene expression') ) - SubClassOf('signal transduction involved in regulation of gene expression' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001118 label: transcription ternary complex disassembly - SubClassOf('transcription ternary complex disassembly' 'biological_process') - SubClassOf('transcription ternary complex disassembly' ObjectSomeValueFrom('part_of' 'DNA-dependent transcription, termination')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0097440 label: apical dendrite - SubClassOf('apical dendrite' 'dendrite') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006352 label: DNA-dependent transcription, initiation - SubClassOf('DNA-dependent transcription, initiation' 'biological_process') - SubClassOf('DNA-dependent transcription, initiation' ObjectSomeValueFrom('part_of' 'transcription, DNA-dependent')) --- Class Changed: http://purl.org/obo/owl/omit#GO_1990020 label: recurrent axon collateral - SubClassOf('recurrent axon collateral' 'axon collateral') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001185 label: termination of RNA polymerase I transcription from promoter for nuclear large rRNA transcript - SubClassOf('termination of RNA polymerase I transcription from promoter for nuclear large rRNA transcript' 'termination of RNA polymerase I transcription') - SubClassOf('termination of RNA polymerase I transcription from promoter for nuclear large rRNA transcript' ObjectSomeValueFrom('part_of' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_2000223 label: regulation of BMP signaling pathway involved in heart jogging - SubClassOf('regulation of BMP signaling pathway involved in heart jogging' 'regulation of BMP signaling pathway') - SubClassOf('regulation of BMP signaling pathway involved in heart jogging' ObjectSomeValueFrom('regulates' 'BMP signaling pathway involved in heart jogging')) - EquivalentClasses('regulation of BMP signaling pathway involved in heart jogging' ObjectSomeValueFrom('regulates' 'BMP signaling pathway involved in heart jogging') ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000035 label: NormalTemperature - SubClassOf('NormalTemperature' 'Temperature') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001087 label: TFIIB-class binding transcription factor activity - SubClassOf('TFIIB-class binding transcription factor activity' 'RNA polymerase II basal transcription factor binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070147 label: mitochondrial cysteinyl-tRNA aminoacylation - EquivalentClasses('cysteinyl-tRNA aminoacylation' 'mitochondrial cysteinyl-tRNA aminoacylation' ) - SubClassOf('mitochondrial cysteinyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') - SubClassOf('mitochondrial cysteinyl-tRNA aminoacylation' 'cysteinyl-tRNA aminoacylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097415 label: cortical Lewy body - SubClassOf('cortical Lewy body' 'Lewy body') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900249 label: positive regulation of cytoplasmic translational elongation - EquivalentClasses('positive regulation of cytoplasmic translational elongation' ObjectSomeValueFrom('positively_regulates' 'cytoplasmic translational elongation') ) - SubClassOf('positive regulation of cytoplasmic translational elongation' ObjectSomeValueFrom('positively_regulates' 'cytoplasmic translational elongation')) - SubClassOf('positive regulation of cytoplasmic translational elongation' 'positive regulation of translational elongation') - SubClassOf('positive regulation of cytoplasmic translational elongation' 'regulation of cytoplasmic translational elongation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000228 label: Surgery - SubClassOf('Surgery' 'Treatment') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045917 label: positive regulation of complement activation - SubClassOf('positive regulation of complement activation' 'positive regulation of protein processing') - SubClassOf('positive regulation of complement activation' 'regulation of complement activation') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000232 label: regulation of rRNA processing - SubClassOf('regulation of rRNA processing' 'regulation of gene expression') - EquivalentClasses('regulation of rRNA processing' ObjectSomeValueFrom('regulates' 'rRNA processing') ) - SubClassOf('regulation of rRNA processing' ObjectSomeValueFrom('regulates' 'rRNA processing')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0031647 label: regulation of protein stability - SubClassOf('regulation of protein stability' 'posttranscriptional regulation of gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032933 label: SREBP signaling pathway - SubClassOf('SREBP signaling pathway' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031556 label: transcriptional attenuation by ribosome - SubClassOf('transcriptional attenuation by ribosome' 'transcriptional attenuation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070526 label: threonylcarbamoyladenosine biosynthetic process - SubClassOf('threonylcarbamoyladenosine biosynthetic process' 'tRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071565 label: nBAF complex - SubClassOf('nBAF complex' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000235 label: regulation of tRNA processing - SubClassOf('regulation of tRNA processing' ObjectSomeValueFrom('regulates' 'tRNA processing')) - SubClassOf('regulation of tRNA processing' 'regulation of gene expression') - EquivalentClasses('regulation of tRNA processing' ObjectSomeValueFrom('regulates' 'tRNA processing') ) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_1001604 label: Nucleariidae and Fonticula group - SubClassOf('Nucleariidae and Fonticula group' 'Opisthokonta') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000167 label: Thymoma - SubClassOf('Thymoma' 'EpithelialOrigin') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000692 label: gene_with_dicistronic_transcript - SubClassOf('gene_with_dicistronic_transcript' 'gene_with_polycistronic_transcript') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_5719 label: Parabasalidea - SubClassOf('Parabasalidea' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000044 label: Carcinogenicity - SubClassOf('Carcinogenicity' 'ToxicActivity') --- Class Changed: http://purl.org/obo/owl/omit#MOD_01148 label: ubiquitinylated lysine - SubClassOf('ubiquitinylated lysine' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0048025 label: negative regulation of mRNA splicing, via spliceosome - SubClassOf('negative regulation of mRNA splicing, via spliceosome' 'regulation of mRNA splicing, via spliceosome') - SubClassOf('negative regulation of mRNA splicing, via spliceosome' ObjectSomeValueFrom('negatively_regulates' 'mRNA splicing, via spliceosome')) - EquivalentClasses('negative regulation of mRNA splicing, via spliceosome' ObjectSomeValueFrom('negatively_regulates' 'mRNA splicing, via spliceosome') ) - SubClassOf('negative regulation of mRNA splicing, via spliceosome' 'negative regulation of mRNA processing') - SubClassOf('negative regulation of mRNA splicing, via spliceosome' 'negative regulation of RNA splicing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006306 label: DNA methylation - SubClassOf('DNA methylation' 'regulation of gene expression, epigenetic') - EquivalentClasses('DNA methylation' 'DNA methylation involved in embryo development' ) - EquivalentClasses('DNA methylation' 'DNA methylation involved in gamete generation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0061417 label: negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress - SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress' 'negative regulation of transcription from RNA polymerase II promoter in response to stress') - SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress' 'regulation of transcription from RNA polymerase II promoter in response to oxidative stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045895 label: positive regulation of mating-type specific transcription, DNA-dependent - SubClassOf('positive regulation of mating-type specific transcription, DNA-dependent' 'regulation of mating-type specific transcription, DNA-dependent') - SubClassOf('positive regulation of mating-type specific transcription, DNA-dependent' 'positive regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001173 label: DNA-dependent transcriptional start site selection - SubClassOf('DNA-dependent transcriptional start site selection' ObjectSomeValueFrom('part_of' 'DNA-dependent transcription, initiation')) - SubClassOf('DNA-dependent transcriptional start site selection' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035952 label: negative regulation of oligopeptide transport by negative regulation of transcription from RNA polymerase II promoter - SubClassOf('negative regulation of oligopeptide transport by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') - SubClassOf('negative regulation of oligopeptide transport by negative regulation of transcription from RNA polymerase II promoter' 'regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('negative regulation of oligopeptide transport by negative regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase II promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0070323 label: positive regulation of translation in response to nitrogen starvation - SubClassOf('positive regulation of translation in response to nitrogen starvation' 'positive regulation of translation in response to stress') - SubClassOf('positive regulation of translation in response to nitrogen starvation' 'regulation of translation in response to nitrogen starvation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031047 label: gene silencing by RNA - SubClassOf('gene silencing by RNA' 'gene silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035514 label: DNA demethylase activity - SubClassOf('DNA demethylase activity' 'biological_process') - SubClassOf('DNA demethylase activity' ObjectSomeValueFrom('part_of' 'DNA demethylation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0060342 label: photoreceptor inner segment membrane - SubClassOf('photoreceptor inner segment membrane' ObjectSomeValueFrom('part_of' 'photoreceptor inner segment')) - SubClassOf('photoreceptor inner segment membrane' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030513 label: positive regulation of BMP signaling pathway - EquivalentClasses('positive regulation of BMP signaling pathway' ObjectSomeValueFrom('positively_regulates' 'BMP signaling pathway') ) - SubClassOf('positive regulation of BMP signaling pathway' 'regulation of BMP signaling pathway') - SubClassOf('positive regulation of BMP signaling pathway' ObjectSomeValueFrom('positively_regulates' 'BMP signaling pathway')) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_30656 label: Dermoptera - SubClassOf('Dermoptera' 'Euarchontoglires') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033417 label: CUU codon-amino acid adaptor activity - SubClassOf('CUU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_1001265 label: mRNA_recoded_by_codon_redefinition - SubClassOf('mRNA_recoded_by_codon_redefinition' 'recoded_mRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032792 label: negative regulation of CREB transcription factor activity - SubClassOf('negative regulation of CREB transcription factor activity' 'negative regulation of sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044026 label: DNA hypermethylation - SubClassOf('DNA hypermethylation' 'regulation of DNA methylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901190 label: regulation of formation of translation initiation ternary complex - SubClassOf('regulation of formation of translation initiation ternary complex' 'regulation of translational initiation') - SubClassOf('regulation of formation of translation initiation ternary complex' ObjectSomeValueFrom('regulates' 'formation of translation initiation ternary complex')) - EquivalentClasses('regulation of formation of translation initiation ternary complex' ObjectSomeValueFrom('regulates' 'formation of translation initiation ternary complex') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000484 label: cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) - SubClassOf('cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)')) - SubClassOf('cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)')) - SubClassOf('cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000722 label: gene_with_dicistronic_mRNA - SubClassOf('gene_with_dicistronic_mRNA' 'gene_with_dicistronic_transcript') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044638 label: envenomation resulting in positive regulation of complement activation, classical pathway in other organism - SubClassOf('envenomation resulting in positive regulation of complement activation, classical pathway in other organism' 'envenomation resulting in modulation of complement activation, classical pathway in other organism') - SubClassOf('envenomation resulting in positive regulation of complement activation, classical pathway in other organism' ObjectSomeValueFrom('has_part' 'positive regulation of complement activation, classical pathway in other organism')) --- Class Changed: http://purl.org/obo/owl/omit#GO_2000806 label: positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled - SubClassOf('positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled' ObjectSomeValueFrom('positively_regulates' 'termination of RNA polymerase II transcription, poly(A)-coupled')) - SubClassOf('positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled' 'regulation of termination of RNA polymerase II transcription, poly(A)-coupled') - EquivalentClasses('positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled' ObjectSomeValueFrom('positively_regulates' 'termination of RNA polymerase II transcription, poly(A)-coupled') ) - SubClassOf('positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled' 'positive regulation of DNA-dependent transcription, termination') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000333 label: Bones - SubClassOf('Bones' 'MusculoskeletalOrgan') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000609 label: oligo_U_tail - SubClassOf('oligo_U_tail' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001077 label: RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription - SubClassOf('RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' 'RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity') - SubClassOf('RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' 'RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#MOD_00237 label: L-beta-methylthioaspartic acid - SubClassOf('L-beta-methylthioaspartic acid' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_314147 label: Glires - SubClassOf('Glires' 'Euarchontoglires') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044357 label: regulation of rRNA stability - SubClassOf('regulation of rRNA stability' 'regulation of RNA stability') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001269 label: SRP_RNA_gene - SubClassOf('SRP_RNA_gene' 'ncRNA_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031438 label: negative regulation of mRNA cleavage - SubClassOf('negative regulation of mRNA cleavage' 'negative regulation of mRNA processing') - SubClassOf('negative regulation of mRNA cleavage' 'regulation of mRNA cleavage') - SubClassOf('negative regulation of mRNA cleavage' ObjectSomeValueFrom('negatively_regulates' 'mRNA cleavage')) - EquivalentClasses('negative regulation of mRNA cleavage' ObjectSomeValueFrom('negatively_regulates' 'mRNA cleavage') ) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000098 label: plasmid_gene - SubClassOf('plasmid_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006435 label: threonyl-tRNA aminoacylation - SubClassOf('threonyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') - EquivalentClasses('threonyl-tRNA aminoacylation' 'mitochondrial threonyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0046782 label: regulation of viral transcription - SubClassOf('regulation of viral transcription' ObjectSomeValueFrom('regulates' 'viral transcription')) - SubClassOf('regulation of viral transcription' 'regulation of gene expression') - EquivalentClasses('regulation of viral transcription' ObjectSomeValueFrom('regulates' 'viral transcription') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0090473 label: lys-arg specific dibasic protein processing - SubClassOf('lys-arg specific dibasic protein processing' 'dibasic protein processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033456 label: GCG codon-amino acid adaptor activity - SubClassOf('GCG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001669 label: RNApol_II_core_promoter - SubClassOf('RNApol_II_core_promoter' 'RNApol_II_promoter') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000896 label: translationally_regulated_gene - SubClassOf('translationally_regulated_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001005 label: RNA polymerase III type 1 promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity - SubClassOf('RNA polymerase III type 1 promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III type 1 promoter transcriptional preinitiation complex assembly')) - SubClassOf('RNA polymerase III type 1 promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity' 'RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000122 label: negative regulation of transcription from RNA polymerase II promoter - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of phosphatidylserine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter involved in heart development' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of pseudohyphal growth by negative regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription, DNA-dependent') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of mating type switching by negative regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cellular hyperosmotic salinity response by negative regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cellular response to alkalinity by negative regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('negative regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription involved in G1/S transition of mitotic cell cycle' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of filamentous growth of a population of unicellular organisms in response to starvation by negative regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('negative regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase II promoter')) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'positive regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transmembrane transport by negative regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of arginine catabolic process by negative regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of ceramide biosynthetic process by negative regulation of transcription from RNA Polymerase II promoter' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of invasive growth in response to glucose limitation by negative regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'regulation of transport by negative regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase II promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0060569 label: positive regulation of peptide hormone processing - SubClassOf('positive regulation of peptide hormone processing' ObjectSomeValueFrom('positively_regulates' 'peptide hormone processing')) - SubClassOf('positive regulation of peptide hormone processing' 'positive regulation of protein processing') - SubClassOf('positive regulation of peptide hormone processing' 'regulation of peptide hormone processing') - EquivalentClasses('positive regulation of peptide hormone processing' ObjectSomeValueFrom('positively_regulates' 'peptide hormone processing') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0015667 label: site-specific DNA-methyltransferase (cytosine-N4-specific) activity - SubClassOf('site-specific DNA-methyltransferase (cytosine-N4-specific) activity' 'DNA-methyltransferase activity') - SubClassOf('site-specific DNA-methyltransferase (cytosine-N4-specific) activity' ObjectSomeValueFrom('part_of' 'N-4 methylation of cytosine')) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_314145 label: Laurasiatheria - SubClassOf('Laurasiatheria' 'Eutheria') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900622 label: positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling - SubClassOf('positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling' 'positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling' ObjectSomeValueFrom('results_in' 'positive regulation of transcription from RNA polymerase II promoter') ) - SubClassOf('positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling' ObjectSomeValueFrom('results_in' 'positive regulation of transcription from RNA polymerase II promoter')) - SubClassOf('positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling' 'regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006430 label: lysyl-tRNA aminoacylation - SubClassOf('lysyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') - EquivalentClasses('lysyl-tRNA aminoacylation' 'mitochondrial lysyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#BFO_0000024 label: fiat object - SubClassOf('fiat object' 'material_entity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006344 label: maintenance of chromatin silencing - SubClassOf('maintenance of chromatin silencing' 'biological_process') - SubClassOf('maintenance of chromatin silencing' ObjectSomeValueFrom('part_of' 'chromatin silencing')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000112 label: Endoderm - SubClassOf('Endoderm' 'EmbryonicTissue') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000655 label: ncRNA - SubClassOf('ncRNA' 'mature_transcript') --- Class Changed: http://purl.org/obo/owl/omit#MOD_00693 label: glycosylated residue - SubClassOf('glycosylated residue' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000732 label: positive regulation of termination of RNA polymerase I transcription - SubClassOf('positive regulation of termination of RNA polymerase I transcription' 'regulation of termination of RNA polymerase I transcription') - SubClassOf('positive regulation of termination of RNA polymerase I transcription' ObjectSomeValueFrom('positively_regulates' 'termination of RNA polymerase I transcription')) - SubClassOf('positive regulation of termination of RNA polymerase I transcription' 'positive regulation of DNA-dependent transcription, termination') - EquivalentClasses('positive regulation of termination of RNA polymerase I transcription' ObjectSomeValueFrom('positively_regulates' 'termination of RNA polymerase I transcription') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0019801 label: cyclization of asparagine involved in intein-mediated protein splicing - SubClassOf('cyclization of asparagine involved in intein-mediated protein splicing' 'biological_process') - SubClassOf('cyclization of asparagine involved in intein-mediated protein splicing' ObjectSomeValueFrom('part_of' 'intein-mediated protein splicing')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0001263 label: ncRNA_gene - SubClassOf('ncRNA_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031936 label: negative regulation of chromatin silencing - EquivalentClasses('negative regulation of chromatin silencing' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing') ) - SubClassOf('negative regulation of chromatin silencing' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing')) - SubClassOf('negative regulation of chromatin silencing' 'positive regulation of transcription, DNA-dependent') - SubClassOf('negative regulation of chromatin silencing' 'negative regulation of gene silencing') - SubClassOf('negative regulation of chromatin silencing' 'positive regulation of gene expression, epigenetic') - SubClassOf('negative regulation of chromatin silencing' 'regulation of chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034243 label: regulation of transcription elongation from RNA polymerase II promoter - SubClassOf('regulation of transcription elongation from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of transcription elongation from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription elongation from RNA polymerase II promoter') ) - SubClassOf('regulation of transcription elongation from RNA polymerase II promoter' 'regulation of DNA-dependent transcription, elongation') - SubClassOf('regulation of transcription elongation from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription elongation from RNA polymerase II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0052909 label: 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity - SubClassOf('18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity' 'rRNA (adenine-N6-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016423 label: tRNA (guanine) methyltransferase activity - SubClassOf('tRNA (guanine) methyltransferase activity' 'tRNA methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007073 label: positive regulation of transcription on exit from mitosis, from RNA polymerase I promoter - SubClassOf('positive regulation of transcription on exit from mitosis, from RNA polymerase I promoter' 'positive regulation of transcription on exit from mitosis') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000073 label: Neutrophils - SubClassOf('Neutrophils' 'Granulocyte') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901643 label: regulation of tRNA methylation in response to nitrogen starvation - SubClassOf('regulation of tRNA methylation in response to nitrogen starvation' 'regulation of tRNA processing') - EquivalentClasses('regulation of tRNA methylation in response to nitrogen starvation' ObjectSomeValueFrom('regulates' 'tRNA methylation in response to nitrogen starvation') ) - SubClassOf('regulation of tRNA methylation in response to nitrogen starvation' ObjectSomeValueFrom('regulates' 'tRNA methylation in response to nitrogen starvation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_1990025 label: F bouton - SubClassOf('F bouton' 'terminal bouton') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006364 label: rRNA processing - SubClassOf('rRNA processing' 'ncRNA processing') - EquivalentClasses('rRNA processing' 'chloroplast rRNA processing' ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000055 label: EpithelialTissueCell - SubClassOf('EpithelialTissueCell' 'cell') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016149 label: translation release factor activity, codon specific - SubClassOf('translation release factor activity, codon specific' 'translation release factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001178 label: regulation of transcriptional start site selection at RNA polymerase II promoter - SubClassOf('regulation of transcriptional start site selection at RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcriptional start site selection at RNA polymerase II promoter')) - EquivalentClasses('regulation of transcriptional start site selection at RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcriptional start site selection at RNA polymerase II promoter') ) - SubClassOf('regulation of transcriptional start site selection at RNA polymerase II promoter' 'regulation of transcription initiation from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002127 label: wobble base cytosine methylation - SubClassOf('wobble base cytosine methylation' 'tRNA wobble cytosine modification') - SubClassOf('wobble base cytosine methylation' 'tRNA C5-cytosine methylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090293 label: nitrogen catabolite regulation of transcription - SubClassOf('nitrogen catabolite regulation of transcription' 'regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000213 label: PulmonaryCarcinoidTumor - SubClassOf('PulmonaryCarcinoidTumor' 'Carcinoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043679 label: axon terminus - SubClassOf('axon terminus' 'neuron projection terminus') - SubClassOf('axon terminus' 'axon part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071051 label: polyadenylation-dependent snoRNA 3'-end processing - SubClassOf('polyadenylation-dependent snoRNA 3'-end processing' 'snoRNA 3'-end processing') - SubClassOf('polyadenylation-dependent snoRNA 3'-end processing' ObjectSomeValueFrom('has_part' 'snoRNA polyadenylation')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000275 label: Atria - SubClassOf('Atria' 'Heart') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_554296 label: Apusozoa - SubClassOf('Apusozoa' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070184 label: mitochondrial tyrosyl-tRNA aminoacylation - SubClassOf('mitochondrial tyrosyl-tRNA aminoacylation' 'tyrosyl-tRNA aminoacylation') - EquivalentClasses('tyrosyl-tRNA aminoacylation' 'mitochondrial tyrosyl-tRNA aminoacylation' ) - SubClassOf('mitochondrial tyrosyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001206 label: RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription - SubClassOf('RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' 'RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription') - SubClassOf('RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' 'RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001129 label: TBP-class protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly - SubClassOf('TBP-class protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly' 'TBP-class protein binding RNA polymerase II transcription factor activity') - SubClassOf('TBP-class protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'RNA polymerase II transcriptional preinitiation complex assembly')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0051090 label: regulation of sequence-specific DNA binding transcription factor activity - SubClassOf('regulation of sequence-specific DNA binding transcription factor activity' ObjectSomeValueFrom('regulates' 'sequence-specific DNA binding transcription factor activity')) - EquivalentClasses('regulation of sequence-specific DNA binding transcription factor activity' ObjectSomeValueFrom('regulates' 'sequence-specific DNA binding transcription factor activity') ) - SubClassOf('regulation of sequence-specific DNA binding transcription factor activity' 'regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071931 label: positive regulation of transcription involved in G1/S transition of mitotic cell cycle - SubClassOf('positive regulation of transcription involved in G1/S transition of mitotic cell cycle' 'regulation of transcription involved in G1/S transition of mitotic cell cycle') - SubClassOf('positive regulation of transcription involved in G1/S transition of mitotic cell cycle' 'positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription involved in G1/S transition of mitotic cell cycle' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0048255 label: mRNA stabilization - SubClassOf('mRNA stabilization' 'regulation of mRNA stability') - SubClassOf('mRNA stabilization' 'RNA stabilization') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035389 label: establishment of chromatin silencing at silent mating-type cassette - SubClassOf('establishment of chromatin silencing at silent mating-type cassette' 'establishment of chromatin silencing') - SubClassOf('establishment of chromatin silencing at silent mating-type cassette' ObjectSomeValueFrom('part_of' 'chromatin silencing at silent mating-type cassette')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0035598 label: N6-threonylcarbomyladenosine methylthiotransferase activity - SubClassOf('N6-threonylcarbomyladenosine methylthiotransferase activity' ObjectSomeValueFrom('part_of' 'tRNA methylthiolation')) - SubClassOf('N6-threonylcarbomyladenosine methylthiotransferase activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000475 label: maturation of 2S rRNA - SubClassOf('maturation of 2S rRNA' 'rRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044074 label: negative regulation by symbiont of host translation - SubClassOf('negative regulation by symbiont of host translation' 'negative regulation of translation') - SubClassOf('negative regulation by symbiont of host translation' 'modulation by symbiont of host translation') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_33630 label: Alveolata - SubClassOf('Alveolata' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000763 label: positive regulation of transcription from RNA polymerase II promoter involved in norepinephrine biosynthetic process - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in norepinephrine biosynthetic process' ) - SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in norepinephrine biosynthetic process' 'biological_process') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in norepinephrine biosynthetic process' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000321 label: mRNA_with_plus_1_frameshift - SubClassOf('mRNA_with_plus_1_frameshift' 'mRNA_with_frameshift') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043922 label: negative regulation by host of viral transcription - SubClassOf('negative regulation by host of viral transcription' 'modulation by host of viral transcription') - SubClassOf('negative regulation by host of viral transcription' 'negative regulation of viral transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035760 label: cytoplasmic polyadenylation-dependent rRNA catabolic process - SubClassOf('cytoplasmic polyadenylation-dependent rRNA catabolic process' 'polyadenylation-dependent ncRNA catabolic process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006363 label: termination of RNA polymerase I transcription - SubClassOf('termination of RNA polymerase I transcription' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter')) - SubClassOf('termination of RNA polymerase I transcription' 'DNA-dependent transcription, termination') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033450 label: GUC codon-amino acid adaptor activity - SubClassOf('GUC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071930 label: negative regulation of transcription involved in G1/S transition of mitotic cell cycle - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription involved in G1/S transition of mitotic cell cycle' ) - SubClassOf('negative regulation of transcription involved in G1/S transition of mitotic cell cycle' 'negative regulation of transcription from RNA polymerase II promoter') - SubClassOf('negative regulation of transcription involved in G1/S transition of mitotic cell cycle' 'regulation of transcription involved in G1/S transition of mitotic cell cycle') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043433 label: negative regulation of sequence-specific DNA binding transcription factor activity - SubClassOf('negative regulation of sequence-specific DNA binding transcription factor activity' 'regulation of sequence-specific DNA binding transcription factor activity') - SubClassOf('negative regulation of sequence-specific DNA binding transcription factor activity' ObjectSomeValueFrom('negatively_regulates' 'sequence-specific DNA binding transcription factor activity')) - EquivalentClasses('negative regulation of sequence-specific DNA binding transcription factor activity' ObjectSomeValueFrom('negatively_regulates' 'sequence-specific DNA binding transcription factor activity') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0006366 label: transcription from RNA polymerase II promoter - SubClassOf('transcription from RNA polymerase II promoter' 'transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035960 label: regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter - EquivalentClasses('regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) - SubClassOf('regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002129 label: wobble position guanine ribose methylation - SubClassOf('wobble position guanine ribose methylation' 'tRNA guanine ribose methylation') - SubClassOf('wobble position guanine ribose methylation' 'wobble position ribose methylation') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001264 label: gRNA_gene - SubClassOf('gRNA_gene' 'ncRNA_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060821 label: inactivation of X chromosome by DNA methylation - SubClassOf('inactivation of X chromosome by DNA methylation' 'dosage compensation by inactivation of X chromosome') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030697 label: S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity - SubClassOf('S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity' 'tRNA (m5U54) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0038051 label: glucocorticoid-activated RNA polymerase II transcription factor binding transcription factor activity - SubClassOf('glucocorticoid-activated RNA polymerase II transcription factor binding transcription factor activity' 'ligand-activated RNA polymerase II transcription factor binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901192 label: positive regulation of formation of translation initiation ternary complex - EquivalentClasses('positive regulation of formation of translation initiation ternary complex' ObjectSomeValueFrom('positively_regulates' 'formation of translation initiation ternary complex') ) - SubClassOf('positive regulation of formation of translation initiation ternary complex' 'regulation of formation of translation initiation ternary complex') - SubClassOf('positive regulation of formation of translation initiation ternary complex' ObjectSomeValueFrom('positively_regulates' 'formation of translation initiation ternary complex')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000116 label: PathologicalEvent - SubClassOf('PathologicalEvent' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000159 label: deletion - SubClassOf('deletion' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070134 label: positive regulation of mitochondrial translational initiation - SubClassOf('positive regulation of mitochondrial translational initiation' ObjectSomeValueFrom('positively_regulates' 'mitochondrial translational initiation')) - SubClassOf('positive regulation of mitochondrial translational initiation' 'positive regulation of translational initiation') - EquivalentClasses('positive regulation of mitochondrial translational initiation' ObjectSomeValueFrom('positively_regulates' 'mitochondrial translational initiation') ) - SubClassOf('positive regulation of mitochondrial translational initiation' 'regulation of mitochondrial translational initiation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000462 label: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - SubClassOf('maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'maturation of SSU-rRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0021912 label: regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification' 'regulation of transcription involved in cell fate commitment') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061395 label: positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance' 'regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034474 label: U2 snRNA 3'-end processing - SubClassOf('U2 snRNA 3'-end processing' 'snRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000194 label: HairyCellLeukemia - SubClassOf('HairyCellLeukemia' 'MatureBCellNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000386 label: second spliceosomal transesterification activity - SubClassOf('second spliceosomal transesterification activity' 'biological_process') - SubClassOf('second spliceosomal transesterification activity' ObjectSomeValueFrom('part_of' 'RNA splicing, via transesterification reactions')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0035552 label: oxidative single-stranded DNA demethylation - SubClassOf('oxidative single-stranded DNA demethylation' 'oxidative DNA demethylation') --- Class Changed: http://purl.org/obo/owl/omit#SO_0005855 label: gene_group - SubClassOf('gene_group' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001226 label: gene_silenced_by_histone_methylation - SubClassOf('gene_silenced_by_histone_methylation' 'gene_silenced_by_histone_modification') --- Class Changed: http://purl.org/obo/owl/omit#PR_000002970 label: pre-translationally modified amino-acid residue - SubClassOf('pre-translationally modified amino-acid residue' 'modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#MOD_00696 label: phosphorylated residue - SubClassOf('phosphorylated residue' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001917 label: photoreceptor inner segment - SubClassOf('photoreceptor inner segment' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097442 label: CA3 pyramidal cell dendrite - SubClassOf('CA3 pyramidal cell dendrite' 'dendrite') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000089 label: kinetoplast_gene - SubClassOf('kinetoplast_gene' 'mt_gene') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_89593 label: Craniata - SubClassOf('Craniata' 'Chordata') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900412 label: regulation of histone methylation by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of histone methylation by regulation of transcription from RNA polymerase II promoter' 'regulation of histone modification by regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of histone methylation by regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of histone methylation by regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_1900461 label: positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000264 label: HepaticArtery - SubClassOf('HepaticArtery' 'Artery') --- Class Changed: http://purl.org/obo/owl/omit#GO_0005575 label: cellular_component - SubClassOf('cellular_component' 'object') - DisjointClasses('cellular_component' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001747 label: open_chromatin_region - SubClassOf('open_chromatin_region' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000077 label: MicroglialCell - SubClassOf('MicroglialCell' 'GlialCell') --- Class Changed: http://purl.org/obo/owl/omit#GO_0075527 label: viral RNA editing - SubClassOf('viral RNA editing' ObjectSomeValueFrom('part_of' 'viral transcription')) - SubClassOf('viral RNA editing' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_8457 label: Sauropsida - SubClassOf('Sauropsida' 'Amniota') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000062 label: Agranulocyte - SubClassOf('Agranulocyte' 'Leukocyte') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000273 label: AscendingAorta - SubClassOf('AscendingAorta' 'Aorta') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070329 label: tRNA seleno-modification - SubClassOf('tRNA seleno-modification' 'tRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071264 label: positive regulation of translational initiation in response to starvation - SubClassOf('positive regulation of translational initiation in response to starvation' 'regulation of translational initiation in response to starvation') - SubClassOf('positive regulation of translational initiation in response to starvation' 'positive regulation of translational initiation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#SO_1001264 label: mRNA_recoded_by_translational_bypass - SubClassOf('mRNA_recoded_by_translational_bypass' 'recoded_mRNA') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000332 label: ThoracicDuct - SubClassOf('ThoracicDuct' 'LymphaticVessels') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097448 label: spine mat - SubClassOf('spine mat' ObjectSomeValueFrom('has_part' 'neuron spine')) - SubClassOf('spine mat' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001870 label: positive regulation of complement activation, lectin pathway - SubClassOf('positive regulation of complement activation, lectin pathway' 'regulation of complement activation, lectin pathway') - SubClassOf('positive regulation of complement activation, lectin pathway' 'positive regulation of complement activation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000244 label: AnatomicFeature - SubClassOf('AnatomicFeature' 'object') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001672 label: bacterial_RNApol_promoter_sigma54 - SubClassOf('bacterial_RNApol_promoter_sigma54' 'bacterial_RNApol_promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001133 label: sequence-specific transcription regulatory region DNA binding RNA polymerase II transcription factor recruiting transcription factor activity - SubClassOf('sequence-specific transcription regulatory region DNA binding RNA polymerase II transcription factor recruiting transcription factor activity' 'sequence-specific DNA binding transcription factor recruiting transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034476 label: U5 snRNA 3'-end processing - SubClassOf('U5 snRNA 3'-end processing' 'snRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000872 label: trans_spliced_mRNA - SubClassOf('trans_spliced_mRNA' 'mRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000460 label: maturation of 5.8S rRNA - SubClassOf('maturation of 5.8S rRNA' 'rRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000450 label: cleavage of bicistronic rRNA transcript (SSU-rRNA, LSU-rRNA) - SubClassOf('cleavage of bicistronic rRNA transcript (SSU-rRNA, LSU-rRNA)' 'endonucleolytic cleavage involved in rRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_6073 label: Cnidaria - SubClassOf('Cnidaria' 'Eumetazoa') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901148 label: gene expression involved in extracellular matrix organization - SubClassOf('gene expression involved in extracellular matrix organization' 'biological_process') - SubClassOf('gene expression involved in extracellular matrix organization' 'gene expression') - EquivalentClasses('gene expression' 'gene expression involved in extracellular matrix organization' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001135 label: RNA polymerase II transcription factor recruiting transcription factor activity - SubClassOf('RNA polymerase II transcription factor recruiting transcription factor activity' 'RNA polymerase II transcription factor binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0019081 label: viral translation - SubClassOf('viral translation' ObjectSomeValueFrom('part_of' 'viral genome expression')) - SubClassOf('viral translation' 'translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000411 label: positive regulation of transcription by galactose - SubClassOf('positive regulation of transcription by galactose' 'carbon catabolite activation of transcription') - SubClassOf('positive regulation of transcription by galactose' 'regulation of transcription by galactose') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000294 label: InferiorVenaCava - SubClassOf('InferiorVenaCava' 'VenaCava') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000970 label: tRNA exon ligation utilizing GTP as source of linkage phosphate - SubClassOf('tRNA exon ligation utilizing GTP as source of linkage phosphate' 'tRNA exon ligation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000968 label: tRNA exon ligation - SubClassOf('tRNA exon ligation' 'RNA exon ligation') - SubClassOf('tRNA exon ligation' ObjectSomeValueFrom('part_of' 'tRNA splicing, via endonucleolytic cleavage and ligation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0030450 label: regulation of complement activation, classical pathway - SubClassOf('regulation of complement activation, classical pathway' 'regulation of complement activation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000315 label: PinealGland - SubClassOf('PinealGland' 'EndocrineOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032055 label: negative regulation of translation in response to stress - SubClassOf('negative regulation of translation in response to stress' 'regulation of translation in response to stress') - SubClassOf('negative regulation of translation in response to stress' 'negative regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034964 label: box H/ACA snoRNA processing - SubClassOf('box H/ACA snoRNA processing' 'snoRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016150 label: translation release factor activity, codon nonspecific - SubClassOf('translation release factor activity, codon nonspecific' 'translation release factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0003154 label: BMP signaling pathway involved in determination of left/right symmetry - SubClassOf('BMP signaling pathway involved in determination of left/right symmetry' 'BMP signaling pathway') - SubClassOf('BMP signaling pathway involved in determination of left/right symmetry' 'regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry') - EquivalentClasses('BMP signaling pathway involved in determination of left/right symmetry' 'BMP signaling pathway' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0002098 label: tRNA wobble uridine modification - EquivalentClasses('tRNA wobble uridine modification' 'mitochondrial tRNA wobble uridine modification' ) - SubClassOf('tRNA wobble uridine modification' 'tRNA wobble base modification') --- Class Changed: http://purl.org/obo/owl/omit#span_Occurrent label: occurrent - EquivalentClasses('occurrent' ObjectUnionOf('processual_entity' 'spatiotemporal_region' 'temporal_region') ) - SubClassOf('occurrent' 'entity') - DisjointClasses('continuant' 'occurrent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070126 label: mitochondrial translational termination - EquivalentClasses('translational termination' 'mitochondrial translational termination' ) - SubClassOf('mitochondrial translational termination' 'biological_process') - SubClassOf('mitochondrial translational termination' 'translational termination') - SubClassOf('mitochondrial translational termination' ObjectSomeValueFrom('part_of' 'mitochondrial translation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033437 label: ACU codon-amino acid adaptor activity - SubClassOf('ACU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071598 label: neuronal ribonucleoprotein granule - SubClassOf('neuronal ribonucleoprotein granule' 'neuron part') - SubClassOf('neuronal ribonucleoprotein granule' ObjectSomeValueFrom('part_of' 'neuron projection')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0046783 label: modification by virus of host polysomes - SubClassOf('modification by virus of host polysomes' 'modulation by virus of host translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010944 label: negative regulation of transcription by competitive promoter binding - SubClassOf('negative regulation of transcription by competitive promoter binding' 'negative regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#snap_SpatialRegion label: spatial_region - EquivalentClasses('spatial_region' ObjectUnionOf('one_dimensional_region' 'three_dimensional_region' 'two_dimensional_region' 'zero_dimensional_region') ) - DisjointClasses('independent_continuant' 'spatial_region') - SubClassOf('spatial_region' 'continuant') - DisjointClasses('dependent_continuant' 'spatial_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070130 label: negative regulation of mitochondrial translation - SubClassOf('negative regulation of mitochondrial translation' 'regulation of mitochondrial translation') - EquivalentClasses('negative regulation of mitochondrial translation' ObjectSomeValueFrom('negatively_regulates' 'mitochondrial translation') ) - SubClassOf('negative regulation of mitochondrial translation' ObjectSomeValueFrom('negatively_regulates' 'mitochondrial translation')) - SubClassOf('negative regulation of mitochondrial translation' 'negative regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_2001209 label: positive regulation of transcription elongation from RNA polymerase I promoter - EquivalentClasses('positive regulation of transcription elongation from RNA polymerase I promoter' ObjectSomeValueFrom('positively_regulates' 'transcription elongation from RNA polymerase I promoter') ) - SubClassOf('positive regulation of transcription elongation from RNA polymerase I promoter' 'positive regulation of DNA-dependent transcription, elongation') - SubClassOf('positive regulation of transcription elongation from RNA polymerase I promoter' ObjectSomeValueFrom('positively_regulates' 'transcription elongation from RNA polymerase I promoter')) - SubClassOf('positive regulation of transcription elongation from RNA polymerase I promoter' 'regulation of transcription elongation from RNA polymerase I promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033270 label: paranode region of axon - SubClassOf('paranode region of axon' 'axon part') - SubClassOf('paranode region of axon' ObjectSomeValueFrom('part_of' 'main axon')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000432 label: positive regulation of transcription from RNA polymerase II promoter by glucose - SubClassOf('positive regulation of transcription from RNA polymerase II promoter by glucose' 'regulation of transcription from RNA polymerase II promoter by glucose') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter by glucose' 'carbon catabolite activation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter by glucose' 'positive regulation of transcription by glucose') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045897 label: positive regulation of transcription during mitosis - SubClassOf('positive regulation of transcription during mitosis' 'positive regulation of transcription, DNA-dependent') - EquivalentClasses('positive regulation of transcription, DNA-dependent' 'positive regulation of transcription during mitosis' ) - SubClassOf('positive regulation of transcription during mitosis' 'regulation of transcription during mitosis') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002935 label: tRNA (adenine-C2-)-methyltransferase activity - SubClassOf('tRNA (adenine-C2-)-methyltransferase activity' 'tRNA (adenine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042622 label: photoreceptor outer segment membrane - SubClassOf('photoreceptor outer segment membrane' 'neuron part') - SubClassOf('photoreceptor outer segment membrane' ObjectSomeValueFrom('part_of' 'photoreceptor outer segment')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000063 label: Granulocyte - SubClassOf('Granulocyte' 'Leukocyte') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000287 label: fusion_gene - SubClassOf('fusion_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901310 label: positive regulation of sterol regulatory element binding protein cleavage - SubClassOf('positive regulation of sterol regulatory element binding protein cleavage' 'positive regulation of protein processing') - EquivalentClasses('positive regulation of sterol regulatory element binding protein cleavage' ObjectSomeValueFrom('positively_regulates' 'sterol regulatory element binding protein cleavage') ) - SubClassOf('positive regulation of sterol regulatory element binding protein cleavage' ObjectSomeValueFrom('positively_regulates' 'sterol regulatory element binding protein cleavage')) - SubClassOf('positive regulation of sterol regulatory element binding protein cleavage' 'regulation of sterol regulatory element binding protein cleavage') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016540 label: protein autoprocessing - SubClassOf('protein autoprocessing' 'protein processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039647 label: suppression by virus of host poly(A)-binding protein activity - SubClassOf('suppression by virus of host poly(A)-binding protein activity' 'suppression by virus of host translation') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_314146 label: Euarchontoglires - SubClassOf('Euarchontoglires' 'Eutheria') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006452 label: translational frameshifting - SubClassOf('translational frameshifting' 'translational elongation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000320 label: PosteriorPituitary - SubClassOf('PosteriorPituitary' 'Pituitary') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900448 label: regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0008434 label: calcitriol receptor activity - SubClassOf('calcitriol receptor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001149 label: bacterial-type RNA polymerase termination site sequence-specific DNA binding transcription factor activity - SubClassOf('bacterial-type RNA polymerase termination site sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000267 label: RenalArteries - SubClassOf('RenalArteries' 'Artery') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061432 label: regulation of transcription from RNA polymerase II promoter in response to methionine - SubClassOf('regulation of transcription from RNA polymerase II promoter in response to methionine' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000805 label: negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled - SubClassOf('negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled' 'negative regulation of DNA-dependent transcription, termination') - SubClassOf('negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled' 'regulation of termination of RNA polymerase II transcription, poly(A)-coupled') - SubClassOf('negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled' ObjectSomeValueFrom('negatively_regulates' 'termination of RNA polymerase II transcription, poly(A)-coupled')) - EquivalentClasses('negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled' ObjectSomeValueFrom('negatively_regulates' 'termination of RNA polymerase II transcription, poly(A)-coupled') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0006432 label: phenylalanyl-tRNA aminoacylation - EquivalentClasses('phenylalanyl-tRNA aminoacylation' 'mitochondrial phenylalanyl-tRNA aminoacylation' ) - SubClassOf('phenylalanyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032784 label: regulation of DNA-dependent transcription, elongation - EquivalentClasses('regulation of DNA-dependent transcription, elongation' ObjectSomeValueFrom('regulates' 'DNA-dependent transcription, elongation') ) - SubClassOf('regulation of DNA-dependent transcription, elongation' 'regulation of transcription, DNA-dependent') - SubClassOf('regulation of DNA-dependent transcription, elongation' ObjectSomeValueFrom('regulates' 'DNA-dependent transcription, elongation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0052910 label: 23S rRNA (adenine(2085)-N(6))-dimethyltransferase activity - SubClassOf('23S rRNA (adenine(2085)-N(6))-dimethyltransferase activity' 'rRNA (adenine-N6-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061413 label: regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source - SubClassOf('regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source' 'carbon catabolite regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035948 label: positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter' 'regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#SO_0001265 label: miRNA_gene - SubClassOf('miRNA_gene' 'ncRNA_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045900 label: negative regulation of translational elongation - SubClassOf('negative regulation of translational elongation' 'regulation of translational elongation') - EquivalentClasses('negative regulation of translational elongation' ObjectSomeValueFrom('negatively_regulates' 'translational elongation') ) - SubClassOf('negative regulation of translational elongation' 'negative regulation of translation') - SubClassOf('negative regulation of translational elongation' ObjectSomeValueFrom('negatively_regulates' 'translational elongation')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000195 label: MantleCellLymphoma - SubClassOf('MantleCellLymphoma' 'MatureBCellNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_7878 label: Dipnoi - SubClassOf('Dipnoi' 'Dipnotetrapodomorpha') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061151 label: BMP signaling pathway involved in renal system segmentation - EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in renal system segmentation' ) - SubClassOf('BMP signaling pathway involved in renal system segmentation' 'BMP signaling pathway') - SubClassOf('BMP signaling pathway involved in renal system segmentation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900526 label: negative regulation of phosphatidylserine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of phosphatidylserine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('negative regulation of phosphatidylserine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('negative regulation of phosphatidylserine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070153 label: mitochondrial leucyl-tRNA aminoacylation - SubClassOf('mitochondrial leucyl-tRNA aminoacylation' 'leucyl-tRNA aminoacylation') - SubClassOf('mitochondrial leucyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') - EquivalentClasses('leucyl-tRNA aminoacylation' 'mitochondrial leucyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001167 label: sequence-specific DNA binding RNA polymerase I transcription factor activity - SubClassOf('sequence-specific DNA binding RNA polymerase I transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter')) - SubClassOf('sequence-specific DNA binding RNA polymerase I transcription factor activity' ObjectSomeValueFrom('part_of' 'regulation of transcription from RNA polymerase I promoter')) - SubClassOf('sequence-specific DNA binding RNA polymerase I transcription factor activity' 'sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_117569 label: Hyperoartia - SubClassOf('Hyperoartia' 'Vertebrata') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001683 label: sequence_motif - SubClassOf('sequence_motif' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000122 label: Disease - SubClassOf('Disease' 'process_aggregate') - SubClassOf('Disease' ObjectSomeValueFrom('affects' 'AnatomicFeature')) - SubClassOf('Disease' ObjectSomeValueFrom('causedBy' 'HarmfulRole')) - SubClassOf('Disease' ObjectSomeValueFrom('treatedBy' 'Treatment')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0007069 label: negative regulation of transcription from RNA polymerase I promoter during mitosis - SubClassOf('negative regulation of transcription from RNA polymerase I promoter during mitosis' 'negative regulation of transcription during mitosis') - SubClassOf('negative regulation of transcription from RNA polymerase I promoter during mitosis' 'negative regulation of transcription from RNA polymerase I promoter') - SubClassOf('negative regulation of transcription from RNA polymerase I promoter during mitosis' 'regulation of transcription from RNA polymerase I promoter, mitotic') --- Class Changed: http://purl.org/obo/owl/omit#GO_0051747 label: cytosine C-5 DNA demethylase activity - SubClassOf('cytosine C-5 DNA demethylase activity' 'DNA demethylase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901193 label: regulation of formation of translation preinitiation complex - SubClassOf('regulation of formation of translation preinitiation complex' 'regulation of translational initiation') - EquivalentClasses('regulation of formation of translation preinitiation complex' ObjectSomeValueFrom('regulates' 'formation of translation preinitiation complex') ) - SubClassOf('regulation of formation of translation preinitiation complex' ObjectSomeValueFrom('regulates' 'formation of translation preinitiation complex')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0031439 label: positive regulation of mRNA cleavage - SubClassOf('positive regulation of mRNA cleavage' 'positive regulation of mRNA processing') - SubClassOf('positive regulation of mRNA cleavage' ObjectSomeValueFrom('positively_regulates' 'mRNA cleavage')) - SubClassOf('positive regulation of mRNA cleavage' 'regulation of mRNA cleavage') - EquivalentClasses('positive regulation of mRNA cleavage' ObjectSomeValueFrom('positively_regulates' 'mRNA cleavage') ) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_0000430 label: UnclassifiedChordata - SubClassOf('UnclassifiedChordata' 'Chordata') --- Class Changed: http://purl.org/obo/owl/omit#GO_1990095 label: positive regulation of transcription from RNA polymerase II promoter in response to reactive oxygen species - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to reactive oxygen species' 'positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032062 label: positive regulation of translation in response to osmotic stress - SubClassOf('positive regulation of translation in response to osmotic stress' 'positive regulation of translation in response to stress') - SubClassOf('positive regulation of translation in response to osmotic stress' 'regulation of translation in response to osmotic stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000434 label: negative regulation of transcription from RNA polymerase II promoter by galactose - SubClassOf('negative regulation of transcription from RNA polymerase II promoter by galactose' 'carbon catabolite repression of transcription from RNA polymerase II promoter') - SubClassOf('negative regulation of transcription from RNA polymerase II promoter by galactose' 'regulation of transcription from RNA polymerase II promoter by galactose') - SubClassOf('negative regulation of transcription from RNA polymerase II promoter by galactose' 'negative regulation of transcription by galactose') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001141 label: bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription - SubClassOf('bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' 'bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity') - SubClassOf('bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' 'sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000325 label: Skin - SubClassOf('Skin' 'IntegumentaryOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060804 label: positive regulation of Wnt receptor signaling pathway by BMP signaling pathway - EquivalentClasses('BMP signaling pathway' 'positive regulation of Wnt receptor signaling pathway by BMP signaling pathway' ) - SubClassOf('positive regulation of Wnt receptor signaling pathway by BMP signaling pathway' 'BMP signaling pathway') - SubClassOf('positive regulation of Wnt receptor signaling pathway by BMP signaling pathway' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070152 label: mitochondrial isoleucyl-tRNA aminoacylation - SubClassOf('mitochondrial isoleucyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') - SubClassOf('mitochondrial isoleucyl-tRNA aminoacylation' 'isoleucyl-tRNA aminoacylation') - EquivalentClasses('isoleucyl-tRNA aminoacylation' 'mitochondrial isoleucyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000246 label: DigestiveOrgan - SubClassOf('DigestiveOrgan' 'AnatomicFeature') --- Class Changed: http://purl.org/obo/owl/omit#GO_0009300 label: antisense RNA transcription - SubClassOf('antisense RNA transcription' 'transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000467 label: exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - SubClassOf('exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'exonucleolytic trimming involved in rRNA processing') - SubClassOf('exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) - SubClassOf('exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'rRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043557 label: regulation of translation in response to osmotic stress - SubClassOf('regulation of translation in response to osmotic stress' 'regulation of translation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010689 label: negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to chemical stimulus - SubClassOf('negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to chemical stimulus' 'negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033405 label: UCU codon-amino acid adaptor activity - SubClassOf('UCU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901194 label: negative regulation of formation of translation preinitiation complex - EquivalentClasses('negative regulation of formation of translation preinitiation complex' ObjectSomeValueFrom('negatively_regulates' 'formation of translation preinitiation complex') ) - SubClassOf('negative regulation of formation of translation preinitiation complex' 'regulation of formation of translation preinitiation complex') - SubClassOf('negative regulation of formation of translation preinitiation complex' ObjectSomeValueFrom('negatively_regulates' 'formation of translation preinitiation complex')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000083 label: regulation of transcription involved in G1/S transition of mitotic cell cycle - EquivalentClasses('regulation of transcription involved in G1/S transition of mitotic cell cycle' 'regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of transcription involved in G1/S transition of mitotic cell cycle' 'biological_process') - SubClassOf('regulation of transcription involved in G1/S transition of mitotic cell cycle' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033436 label: AUG codon-amino acid adaptor activity - SubClassOf('AUG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031125 label: rRNA 3'-end processing - SubClassOf('rRNA 3'-end processing' 'ncRNA 3'-end processing') - SubClassOf('rRNA 3'-end processing' 'rRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042348 label: NF-kappaB import into nucleus - SubClassOf('NF-kappaB import into nucleus' ObjectSomeValueFrom('part_of' 'I-kappaB kinase/NF-kappaB cascade')) - SubClassOf('NF-kappaB import into nucleus' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001058 label: promoter_targeting_sequence - SubClassOf('promoter_targeting_sequence' 'transcriptional_cis_regulatory_region') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_33090 label: Viridiplantae - SubClassOf('Viridiplantae' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045947 label: negative regulation of translational initiation - SubClassOf('negative regulation of translational initiation' 'regulation of translational initiation') - SubClassOf('negative regulation of translational initiation' ObjectSomeValueFrom('negatively_regulates' 'translational initiation')) - SubClassOf('negative regulation of translational initiation' 'negative regulation of translation') - EquivalentClasses('negative regulation of translational initiation' ObjectSomeValueFrom('negatively_regulates' 'translational initiation') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0019085 label: immediate early viral mRNA transcription - SubClassOf('immediate early viral mRNA transcription' 'mRNA transcription') - SubClassOf('immediate early viral mRNA transcription' 'viral transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061423 label: positive regulation of sodium ion transport by positive regulation of transcription from RNA polymerase II promoter - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of sodium ion transport by positive regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('positive regulation of sodium ion transport by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of sodium ion transport by positive regulation of transcription from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006362 label: transcription elongation from RNA polymerase I promoter - SubClassOf('transcription elongation from RNA polymerase I promoter' 'DNA-dependent transcription, elongation') - SubClassOf('transcription elongation from RNA polymerase I promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0061149 label: BMP signaling pathway involved in ureter morphogenesis - EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in ureter morphogenesis' ) - SubClassOf('BMP signaling pathway involved in ureter morphogenesis' 'BMP signaling pathway') - SubClassOf('BMP signaling pathway involved in ureter morphogenesis' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000436 label: carbon catabolite activation of transcription from RNA polymerase II promoter - SubClassOf('carbon catabolite activation of transcription from RNA polymerase II promoter' 'carbon catabolite regulation of transcription from RNA polymerase II promoter') - SubClassOf('carbon catabolite activation of transcription from RNA polymerase II promoter' 'carbon catabolite activation of transcription') - SubClassOf('carbon catabolite activation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000461 label: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - SubClassOf('endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) - SubClassOf('endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'rRNA 3'-end processing') - SubClassOf('endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000090 label: plastid_gene - SubClassOf('plastid_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006418 label: tRNA aminoacylation for protein translation - SubClassOf('tRNA aminoacylation for protein translation' ObjectSomeValueFrom('part_of' 'translation')) - SubClassOf('tRNA aminoacylation for protein translation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000341 label: Cerebellum - SubClassOf('Cerebellum' 'Brain') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901244 label: positive regulation of transcription from RNA polymerase II promoter involved in defense response to fungus - SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in defense response to fungus' 'biological_process') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in defense response to fungus' 'positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in defense response to fungus' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0090079 label: translation regulator activity, nucleic acid binding - SubClassOf('translation regulator activity, nucleic acid binding' 'translation regulator activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030423 label: targeting of mRNA for destruction involved in RNA interference - SubClassOf('targeting of mRNA for destruction involved in RNA interference' 'biological_process') - SubClassOf('targeting of mRNA for destruction involved in RNA interference' ObjectSomeValueFrom('part_of' 'RNA interference')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0034246 label: mitochondrial RNA polymerase binding promoter specificity activity - SubClassOf('mitochondrial RNA polymerase binding promoter specificity activity' ObjectSomeValueFrom('part_of' 'transcription initiation from mitochondrial promoter')) - SubClassOf('mitochondrial RNA polymerase binding promoter specificity activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044637 label: envenomation resulting in negative regulation of complement activation, classical pathway in other organism - SubClassOf('envenomation resulting in negative regulation of complement activation, classical pathway in other organism' ObjectSomeValueFrom('has_part' 'negative regulation of complement activation, classical pathway in other organism')) - SubClassOf('envenomation resulting in negative regulation of complement activation, classical pathway in other organism' 'envenomation resulting in modulation of complement activation, classical pathway in other organism') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032455 label: nerve growth factor processing - SubClassOf('nerve growth factor processing' 'peptide hormone processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000183 label: chromatin silencing at rDNA - SubClassOf('chromatin silencing at rDNA' 'chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000639 label: negative regulation of SREBP signaling pathway - EquivalentClasses('negative regulation of SREBP signaling pathway' ObjectSomeValueFrom('negatively_regulates' 'SREBP signaling pathway') ) - SubClassOf('negative regulation of SREBP signaling pathway' 'regulation of SREBP signaling pathway') - SubClassOf('negative regulation of SREBP signaling pathway' ObjectSomeValueFrom('negatively_regulates' 'SREBP signaling pathway')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000716 label: dicistronic_mRNA - SubClassOf('dicistronic_mRNA' 'polycistronic_mRNA') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000356 label: UterineTubes - SubClassOf('UterineTubes' 'FemaleReproductiveSystem') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000804 label: regulation of termination of RNA polymerase II transcription, poly(A)-coupled - EquivalentClasses('regulation of termination of RNA polymerase II transcription, poly(A)-coupled' ObjectSomeValueFrom('regulates' 'termination of RNA polymerase II transcription, poly(A)-coupled') ) - SubClassOf('regulation of termination of RNA polymerase II transcription, poly(A)-coupled' 'regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of termination of RNA polymerase II transcription, poly(A)-coupled' ObjectSomeValueFrom('regulates' 'termination of RNA polymerase II transcription, poly(A)-coupled')) - SubClassOf('regulation of termination of RNA polymerase II transcription, poly(A)-coupled' 'regulation of DNA-dependent transcription, termination') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_6072 label: Eumetazoa - SubClassOf('Eumetazoa' 'Metazoa') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035597 label: N6-isopentenyladenosine methylthiotransferase activity - SubClassOf('N6-isopentenyladenosine methylthiotransferase activity' ObjectSomeValueFrom('part_of' 'tRNA methylthiolation')) - SubClassOf('N6-isopentenyladenosine methylthiotransferase activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060817 label: inactivation of paternal X chromosome - SubClassOf('inactivation of paternal X chromosome' 'dosage compensation by inactivation of X chromosome') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031555 label: transcriptional attenuation - SubClassOf('transcriptional attenuation' 'regulation of DNA-dependent transcription, termination') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090124 label: N-4 methylation of cytosine - SubClassOf('N-4 methylation of cytosine' 'DNA methylation on cytosine') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000891 label: negatively_autoregulated_gene - SubClassOf('negatively_autoregulated_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_554915 label: Amoebozoa - SubClassOf('Amoebozoa' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000097 label: Tissue - SubClassOf('Tissue' 'object_aggregate') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000435 label: positive regulation of transcription from RNA polymerase II promoter by galactose - SubClassOf('positive regulation of transcription from RNA polymerase II promoter by galactose' 'positive regulation of transcription by galactose') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter by galactose' 'carbon catabolite activation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter by galactose' 'regulation of transcription from RNA polymerase II promoter by galactose') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000104 label: AdiposeTissue - SubClassOf('AdiposeTissue' 'ConnectiveTissue') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000771 label: QTL - SubClassOf('QTL' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900416 label: regulation of 4,6-pyruvylated galactose residue biosynthetic process by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of 4,6-pyruvylated galactose residue biosynthetic process by regulation of transcription from RNA polymerase II promoter' 'regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of 4,6-pyruvylated galactose residue biosynthetic process by regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of 4,6-pyruvylated galactose residue biosynthetic process by regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000471 label: endonucleolytic cleavage in 3'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - SubClassOf('endonucleolytic cleavage in 3'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000353 label: formation of quadruple SL/U4/U5/U6 snRNP - SubClassOf('formation of quadruple SL/U4/U5/U6 snRNP' 'biological_process') - SubClassOf('formation of quadruple SL/U4/U5/U6 snRNP' ObjectSomeValueFrom('part_of' 'mRNA trans splicing, SL addition')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000179 label: HodgkinLymphoma - SubClassOf('HodgkinLymphoma' 'LymphoidNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000295 label: SuperiorVenaCava - SubClassOf('SuperiorVenaCava' 'VenaCava') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_9606 label: Homo sapiens - SubClassOf('Homo sapiens' 'Homo') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060260 label: regulation of transcription initiation from RNA polymerase II promoter - SubClassOf('regulation of transcription initiation from RNA polymerase II promoter' 'regulation of DNA-dependent transcription, initiation') - SubClassOf('regulation of transcription initiation from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription initiation from RNA polymerase II promoter') ) - SubClassOf('regulation of transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription initiation from RNA polymerase II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_1900460 label: negative regulation of invasive growth in response to glucose limitation by negative regulation of transcription from RNA polymerase II promoter - SubClassOf('negative regulation of invasive growth in response to glucose limitation by negative regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of invasive growth in response to glucose limitation by negative regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('negative regulation of invasive growth in response to glucose limitation by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000280 label: engineered_gene - SubClassOf('engineered_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061177 label: type Is terminal bouton - SubClassOf('type Is terminal bouton' 'type I terminal bouton') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031564 label: transcription antitermination - SubClassOf('transcription antitermination' 'transcriptional attenuation') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900474 label: negative regulation of mating type switching by negative regulation of transcription from RNA polymerase II promoter - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of mating type switching by negative regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('negative regulation of mating type switching by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') - SubClassOf('negative regulation of mating type switching by negative regulation of transcription from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_33634 label: Stramenopiles - SubClassOf('Stramenopiles' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035954 label: positive regulation of dipeptide transport by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of dipeptide transport by positive regulation of transcription from RNA polymerase II promoter' 'regulation of dipeptide transport by regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of dipeptide transport by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of oligopeptide transport by positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of dipeptide transport by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0044294 label: dendritic growth cone - SubClassOf('dendritic growth cone' 'dendrite terminus') - SubClassOf('dendritic growth cone' 'growth cone') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070041 label: rRNA (uridine-C5-)-methyltransferase activity - SubClassOf('rRNA (uridine-C5-)-methyltransferase activity' 'rRNA (uridine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007068 label: negative regulation of transcription during mitosis - SubClassOf('negative regulation of transcription during mitosis' 'regulation of transcription during mitosis') - SubClassOf('negative regulation of transcription during mitosis' 'negative regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#span_SpatiotemporalRegion label: spatiotemporal_region - SubClassOf('spatiotemporal_region' 'occurrent') - DisjointClasses('spatiotemporal_region' 'temporal_region') - EquivalentClasses('spatiotemporal_region' ObjectUnionOf('connected_spatiotemporal_region' 'scattered_spatiotemporal_region') ) - DisjointClasses('processual_entity' 'spatiotemporal_region') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000377 label: Urethra - SubClassOf('Urethra' 'UrinaryOrgan') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000292 label: SplenicVein - SubClassOf('SplenicVein' 'Vein') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000431 label: regulation of transcription from RNA polymerase II promoter by galactose - SubClassOf('regulation of transcription from RNA polymerase II promoter by galactose' 'regulation of transcription by galactose') - SubClassOf('regulation of transcription from RNA polymerase II promoter by galactose' 'carbon catabolite regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002100 label: tRNA wobble adenosine to inosine editing - SubClassOf('tRNA wobble adenosine to inosine editing' 'tRNA wobble base modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000478 label: endonucleolytic cleavage involved in rRNA processing - EquivalentClasses('endonucleolytic cleavage involved in rRNA processing' ObjectSomeValueFrom('part_of' 'rRNA processing') ) - SubClassOf('endonucleolytic cleavage involved in rRNA processing' 'cleavage involved in rRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070922 label: small RNA loading onto RISC - SubClassOf('small RNA loading onto RISC' 'biological_process') - SubClassOf('small RNA loading onto RISC' ObjectSomeValueFrom('part_of' 'gene silencing by RNA')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0003705 label: RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity - SubClassOf('RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000192 label: ExtranodalMarginalZoneLymphoma - SubClassOf('ExtranodalMarginalZoneLymphoma' 'MatureBCellNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071038 label: nuclear polyadenylation-dependent tRNA catabolic process - SubClassOf('nuclear polyadenylation-dependent tRNA catabolic process' 'nuclear polyadenylation-dependent ncRNA catabolic process') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000088 label: mt_gene - SubClassOf('mt_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0009048 label: dosage compensation by inactivation of X chromosome - SubClassOf('dosage compensation by inactivation of X chromosome' 'dosage compensation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039551 label: suppression by virus of host IRF3 activity by positive regulation of IRF3 catabolic process - SubClassOf('suppression by virus of host IRF3 activity by positive regulation of IRF3 catabolic process' 'suppression by virus of host IRF3 activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0038053 label: estrogen-activated RNA polymerase II transcription factor binding transcription factor activity - SubClassOf('estrogen-activated RNA polymerase II transcription factor binding transcription factor activity' 'ligand-activated RNA polymerase II transcription factor binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000307 label: CpG_island - SubClassOf('CpG_island' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006424 label: glutamyl-tRNA aminoacylation - SubClassOf('glutamyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') - EquivalentClasses('glutamyl-tRNA aminoacylation' 'mitochondrial glutamyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#MOD_01150 label: neddylated lysine - SubClassOf('neddylated lysine' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000657 label: repeat_region - SubClassOf('repeat_region' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000289 label: InternalJugularVein - SubClassOf('InternalJugularVein' 'Vein') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043688 label: conversion of aspartyl-tRNA to asparaginyl-tRNA - SubClassOf('conversion of aspartyl-tRNA to asparaginyl-tRNA' 'charged-tRNA amino acid modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900413 label: positive regulation of phospholipid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of phospholipid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of phospholipid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('positive regulation of phospholipid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045958 label: positive regulation of complement activation, alternative pathway - SubClassOf('positive regulation of complement activation, alternative pathway' 'regulation of complement activation, alternative pathway') - SubClassOf('positive regulation of complement activation, alternative pathway' 'positive regulation of complement activation') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000581 label: cap - SubClassOf('cap' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001205 label: SP6_RNA_Polymerase_Promoter - SubClassOf('SP6_RNA_Polymerase_Promoter' 'Phage_RNA_Polymerase_Promoter') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000634 label: polycistronic_mRNA - SubClassOf('polycistronic_mRNA' 'mRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0008152 label: metabolic process - SubClassOf('metabolic process' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032839 label: dendrite cytoplasm - SubClassOf('dendrite cytoplasm' ObjectSomeValueFrom('part_of' 'dendrite')) - SubClassOf('dendrite cytoplasm' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002107 label: generation of mature 3'-end of 5S rRNA generated by RNA polymerase III - SubClassOf('generation of mature 3'-end of 5S rRNA generated by RNA polymerase III' 'rRNA 3'-end processing') - SubClassOf('generation of mature 3'-end of 5S rRNA generated by RNA polymerase III' 'maturation of 5S rRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061425 label: positive regulation of ethanol catabolic process by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of ethanol catabolic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of ethanol catabolic process by positive regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('positive regulation of ethanol catabolic process by positive regulation of transcription from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090419 label: negative regulation of transcription involved in G2/M transition of mitotic cell cycle - SubClassOf('negative regulation of transcription involved in G2/M transition of mitotic cell cycle' 'regulation of transcription involved in G2/M transition of mitotic cell cycle') - EquivalentClasses('negative regulation of transcription, DNA-dependent' 'negative regulation of transcription involved in G2/M transition of mitotic cell cycle' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0017082 label: mineralocorticoid receptor activity - SubClassOf('mineralocorticoid receptor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000430 label: regulation of transcription from RNA polymerase II promoter by glucose - SubClassOf('regulation of transcription from RNA polymerase II promoter by glucose' 'carbon catabolite regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of transcription from RNA polymerase II promoter by glucose' 'regulation of transcription by glucose') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070899 label: mitochondrial tRNA wobble uridine modification - SubClassOf('mitochondrial tRNA wobble uridine modification' 'tRNA wobble uridine modification') - EquivalentClasses('tRNA wobble uridine modification' 'mitochondrial tRNA wobble uridine modification' ) - SubClassOf('mitochondrial tRNA wobble uridine modification' 'mitochondrial tRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001715 label: ISRE - SubClassOf('ISRE' 'transcriptional_cis_regulatory_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000900 label: translation repressor activity, nucleic acid binding - SubClassOf('translation repressor activity, nucleic acid binding' 'translation regulator activity, nucleic acid binding') - SubClassOf('translation repressor activity, nucleic acid binding' 'translation repressor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043195 label: terminal bouton - SubClassOf('terminal bouton' 'axon part') - SubClassOf('terminal bouton' ObjectSomeValueFrom('part_of' 'axon terminus')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000166 label: SplenicLymphangioma - SubClassOf('SplenicLymphangioma' 'EpithelialOrigin') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006413 label: translational initiation - SubClassOf('translational initiation' 'biological_process') - EquivalentClasses('translational initiation' 'mitochondrial translational initiation' ) - SubClassOf('translational initiation' ObjectSomeValueFrom('part_of' 'translation')) --- Class Changed: http://purl.org/obo/owl/omit#span_SpatiotemporalInterval label: spatiotemporal_interval - SubClassOf('spatiotemporal_interval' 'connected_spatiotemporal_region') - DisjointClasses('spatiotemporal_instant' 'spatiotemporal_interval') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032785 label: negative regulation of DNA-dependent transcription, elongation - EquivalentClasses('negative regulation of DNA-dependent transcription, elongation' ObjectSomeValueFrom('negatively_regulates' 'DNA-dependent transcription, elongation') ) - SubClassOf('negative regulation of DNA-dependent transcription, elongation' 'regulation of DNA-dependent transcription, elongation') - SubClassOf('negative regulation of DNA-dependent transcription, elongation' ObjectSomeValueFrom('negatively_regulates' 'DNA-dependent transcription, elongation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0051092 label: positive regulation of NF-kappaB transcription factor activity - SubClassOf('positive regulation of NF-kappaB transcription factor activity' 'positive regulation of sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043025 label: neuronal cell body - SubClassOf('neuronal cell body' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039561 label: suppression by virus of host IRF9 activity by positive regulation of IRF9 localization to nucleus - SubClassOf('suppression by virus of host IRF9 activity by positive regulation of IRF9 localization to nucleus' 'suppression by virus of host IRF9 activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010757 label: negative regulation of plasminogen activation - SubClassOf('negative regulation of plasminogen activation' ObjectSomeValueFrom('negatively_regulates' 'plasminogen activation')) - SubClassOf('negative regulation of plasminogen activation' 'regulation of plasminogen activation') - EquivalentClasses('negative regulation of plasminogen activation' ObjectSomeValueFrom('negatively_regulates' 'plasminogen activation') ) - SubClassOf('negative regulation of plasminogen activation' 'negative regulation of protein processing') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000711 label: gene_with_mRNA_recoded_by_translational_bypass - SubClassOf('gene_with_mRNA_recoded_by_translational_bypass' 'gene_with_recoded_mRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0072101 label: specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway - SubClassOf('specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway' 'regulation of transcription from RNA polymerase II promoter involved in kidney development') - SubClassOf('specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway' 'BMP signaling pathway') --- Class Changed: http://purl.org/obo/owl/omit#span_FiatProcessPart label: fiat_process_part - DisjointClasses('fiat_process_part' 'process_aggregate') - DisjointClasses('fiat_process_part' 'process_boundary') - DisjointClasses('fiat_process_part' 'process') - DisjointClasses('fiat_process_part' 'processual_context') - SubClassOf('fiat_process_part' 'processual_entity') --- Class Changed: http://purl.org/obo/owl/omit#GO_2001126 label: positive regulation of translational frameshifting - EquivalentClasses('positive regulation of translational frameshifting' ObjectSomeValueFrom('positively_regulates' 'translational frameshifting') ) - SubClassOf('positive regulation of translational frameshifting' 'regulation of translational frameshifting') - SubClassOf('positive regulation of translational frameshifting' 'positive regulation of translational elongation') - SubClassOf('positive regulation of translational frameshifting' ObjectSomeValueFrom('positively_regulates' 'translational frameshifting')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0034230 label: enkephalin processing - SubClassOf('enkephalin processing' 'peptide hormone processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0021913 label: regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification' 'biological_process') - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification' 'regulation of transcription involved in cell fate commitment') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002132 label: wobble position uridine ribose methylation - SubClassOf('wobble position uridine ribose methylation' 'wobble position ribose methylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000379 label: tRNA-type intron splice site recognition and cleavage - SubClassOf('tRNA-type intron splice site recognition and cleavage' 'RNA processing') - SubClassOf('tRNA-type intron splice site recognition and cleavage' ObjectSomeValueFrom('part_of' 'tRNA splicing, via endonucleolytic cleavage and ligation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0060820 label: inactivation of X chromosome by heterochromatin assembly - SubClassOf('inactivation of X chromosome by heterochromatin assembly' 'dosage compensation by inactivation of X chromosome') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030696 label: tRNA (m5U54) methyltransferase activity - SubClassOf('tRNA (m5U54) methyltransferase activity' 'tRNA (uracil) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061408 label: positive regulation of transcription from RNA polymerase II promoter in response to heat stress - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to heat stress' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000002 label: sequence_secondary_structure - SubClassOf('sequence_secondary_structure' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033408 label: UCG codon-amino acid adaptor activity - SubClassOf('UCG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034473 label: U1 snRNA 3'-end processing - SubClassOf('U1 snRNA 3'-end processing' 'snRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000150 label: ConnectiveOrigin - SubClassOf('ConnectiveOrigin' 'BenignNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0004886 label: 9-cis retinoic acid receptor activity - SubClassOf('9-cis retinoic acid receptor activity' 'retinoic acid receptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000473 label: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) - SubClassOf('maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' 'maturation of LSU-rRNA') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000363 label: floxed_gene - SubClassOf('floxed_gene' 'transgene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070816 label: phosphorylation of RNA polymerase II C-terminal domain - SubClassOf('phosphorylation of RNA polymerase II C-terminal domain' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016479 label: negative regulation of transcription from RNA polymerase I promoter - SubClassOf('negative regulation of transcription from RNA polymerase I promoter' 'negative regulation of transcription, DNA-dependent') - SubClassOf('negative regulation of transcription from RNA polymerase I promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase I promoter')) - SubClassOf('negative regulation of transcription from RNA polymerase I promoter' 'regulation of transcription from RNA polymerase I promoter') - EquivalentClasses('negative regulation of transcription from RNA polymerase I promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase I promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_1900446 label: negative regulation of tRNA transcription from RNA polymerase III promoter - SubClassOf('negative regulation of tRNA transcription from RNA polymerase III promoter' 'negative regulation of transcription from RNA polymerase III promoter') - SubClassOf('negative regulation of tRNA transcription from RNA polymerase III promoter' ObjectSomeValueFrom('negatively_regulates' 'tRNA transcription from RNA polymerase III promoter')) - EquivalentClasses('negative regulation of tRNA transcription from RNA polymerase III promoter' ObjectSomeValueFrom('negatively_regulates' 'tRNA transcription from RNA polymerase III promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001181 label: core RNA polymerase I binding transcription factor activity - SubClassOf('core RNA polymerase I binding transcription factor activity' 'biological_process') - SubClassOf('core RNA polymerase I binding transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0001913 label: bacterial_RNApol_promoter_sigma_ecf - SubClassOf('bacterial_RNApol_promoter_sigma_ecf' 'bacterial_RNApol_promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901223 label: negative regulation of NIK/NF-kappaB cascade - SubClassOf('negative regulation of NIK/NF-kappaB cascade' 'regulation of NIK/NF-kappaB cascade') - EquivalentClasses('negative regulation of NIK/NF-kappaB cascade' ObjectSomeValueFrom('negatively_regulates' 'NIK/NF-kappaB cascade') ) - SubClassOf('negative regulation of NIK/NF-kappaB cascade' ObjectSomeValueFrom('negatively_regulates' 'NIK/NF-kappaB cascade')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0070028 label: regulation of transcription by carbon monoxide - SubClassOf('regulation of transcription by carbon monoxide' 'regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016434 label: rRNA (cytosine) methyltransferase activity - SubClassOf('rRNA (cytosine) methyltransferase activity' 'rRNA methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061414 label: positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source - SubClassOf('positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source' 'carbon catabolite activation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source' 'regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001740 label: gene_with_start_codon_CUG - SubClassOf('gene_with_start_codon_CUG' 'gene_with_non_canonical_start_codon') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000613 label: bacterial_RNApol_promoter - SubClassOf('bacterial_RNApol_promoter' 'RNA_polymerase_promoter') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000151 label: EpithelialOrigin - SubClassOf('EpithelialOrigin' 'BenignNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000447 label: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - SubClassOf('endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)') - SubClassOf('endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) - SubClassOf('endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0010955 label: negative regulation of protein processing - SubClassOf('negative regulation of protein processing' ObjectSomeValueFrom('negatively_regulates' 'protein processing')) - EquivalentClasses('negative regulation of protein processing' ObjectSomeValueFrom('negatively_regulates' 'protein processing') ) - SubClassOf('negative regulation of protein processing' 'regulation of protein processing') --- Class Changed: http://purl.org/obo/owl/omit#MOD_00703 label: isoprenylated residue - SubClassOf('isoprenylated residue' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039607 label: proteolysis by virus of host translation initiation factor - SubClassOf('proteolysis by virus of host translation initiation factor' 'suppression by virus of host translation initiation factor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000361 label: DuctusDeferens - SubClassOf('DuctusDeferens' 'MaleReproductiveSystem') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000206 label: DuctalCarcinoma - SubClassOf('DuctalCarcinoma' 'Carcinoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007549 label: dosage compensation - SubClassOf('dosage compensation' 'regulation of gene expression, epigenetic') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000825 label: positive regulation of androgen receptor activity - SubClassOf('positive regulation of androgen receptor activity' 'positive regulation of sequence-specific DNA binding transcription factor activity') - EquivalentClasses('positive regulation of androgen receptor activity' ObjectSomeValueFrom('positively_regulates' 'androgen receptor activity') ) - SubClassOf('positive regulation of androgen receptor activity' ObjectSomeValueFrom('positively_regulates' 'androgen receptor activity')) - SubClassOf('positive regulation of androgen receptor activity' 'regulation of androgen receptor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000314 label: ParathyroidGlands - SubClassOf('ParathyroidGlands' 'EndocrineOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039605 label: TFIIB-class transcription factor binding involved in viral suppression of host transcription initiation from RNA polymerase II promoter - SubClassOf('TFIIB-class transcription factor binding involved in viral suppression of host transcription initiation from RNA polymerase II promoter' 'biological_process') - SubClassOf('TFIIB-class transcription factor binding involved in viral suppression of host transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('part_of' 'suppression by virus of host transcription initiation from RNA polymerase II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000995 label: core RNA polymerase III binding transcription factor activity - SubClassOf('core RNA polymerase III binding transcription factor activity' 'biological_process') - SubClassOf('core RNA polymerase III binding transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0060967 label: negative regulation of gene silencing by RNA - SubClassOf('negative regulation of gene silencing by RNA' 'negative regulation of gene silencing') - SubClassOf('negative regulation of gene silencing by RNA' ObjectSomeValueFrom('negatively_regulates' 'gene silencing by RNA')) - SubClassOf('negative regulation of gene silencing by RNA' 'regulation of gene silencing by RNA') - EquivalentClasses('negative regulation of gene silencing by RNA' ObjectSomeValueFrom('negatively_regulates' 'gene silencing by RNA') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001514 label: selenocysteine incorporation - SubClassOf('selenocysteine incorporation' 'translational readthrough') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000248 label: HematopoieiticOrgan - SubClassOf('HematopoieiticOrgan' 'AnatomicFeature') --- Class Changed: http://purl.org/obo/owl/omit#snap_OneDimensionalRegion label: one_dimensional_region - DisjointClasses('one_dimensional_region' 'zero_dimensional_region') - SubClassOf('one_dimensional_region' 'spatial_region') - DisjointClasses('one_dimensional_region' 'two_dimensional_region') - DisjointClasses('one_dimensional_region' 'three_dimensional_region') --- Class Changed: http://purl.org/obo/owl/omit#snap_Function label: function - SubClassOf('function' 'realizable_entity') - DisjointClasses('disposition' 'function') - DisjointClasses('function' 'role') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000800 label: Regulation - SubClassOf('Regulation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070924 label: heterochromatin assembly involved in chromatin silencing by small RNA - SubClassOf('heterochromatin assembly involved in chromatin silencing by small RNA' 'heterochromatin assembly involved in chromatin silencing') - EquivalentClasses('heterochromatin assembly involved in chromatin silencing by small RNA' ObjectSomeValueFrom('part_of' 'chromatin silencing by small RNA') ) - SubClassOf('heterochromatin assembly involved in chromatin silencing by small RNA' ObjectSomeValueFrom('part_of' 'chromatin silencing by small RNA')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0043630 label: ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process - SubClassOf('ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process' 'ncRNA polyadenylation') - EquivalentClasses('ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process' ObjectIntersectionOf('ncRNA polyadenylation' ObjectSomeValueFrom('part_of' 'polyadenylation-dependent ncRNA catabolic process')) ) - SubClassOf('ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process' ObjectSomeValueFrom('part_of' 'polyadenylation-dependent ncRNA catabolic process')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0085033 label: positive regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade - SubClassOf('positive regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade' 'positive regulation of I-kappaB kinase/NF-kappaB cascade') - SubClassOf('positive regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade' 'modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001639 label: RNase_P_RNA_gene - SubClassOf('RNase_P_RNA_gene' 'ncRNA_gene') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000286 label: RightVentricle - SubClassOf('RightVentricle' 'Ventricles') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031935 label: regulation of chromatin silencing - SubClassOf('regulation of chromatin silencing' 'regulation of transcription, DNA-dependent') - EquivalentClasses('regulation of chromatin silencing' ObjectSomeValueFrom('regulates' 'chromatin silencing') ) - SubClassOf('regulation of chromatin silencing' ObjectSomeValueFrom('regulates' 'chromatin silencing')) - SubClassOf('regulation of chromatin silencing' 'regulation of gene silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001731 label: formation of translation preinitiation complex - SubClassOf('formation of translation preinitiation complex' 'biological_process') - SubClassOf('formation of translation preinitiation complex' ObjectSomeValueFrom('part_of' 'translational initiation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000350 label: generation of catalytic spliceosome for second transesterification step - SubClassOf('generation of catalytic spliceosome for second transesterification step' 'biological_process') - SubClassOf('generation of catalytic spliceosome for second transesterification step' ObjectSomeValueFrom('part_of' 'spliceosomal conformational changes to generate catalytic conformation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_1990033 label: dendritic branch point - SubClassOf('dendritic branch point' ObjectSomeValueFrom('part_of' 'dendrite')) - SubClassOf('dendritic branch point' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0021777 label: BMP signaling pathway involved in spinal cord association neuron specification - EquivalentClasses('BMP signaling pathway involved in spinal cord association neuron specification' 'BMP signaling pathway' ) - SubClassOf('BMP signaling pathway involved in spinal cord association neuron specification' 'regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification') - SubClassOf('BMP signaling pathway involved in spinal cord association neuron specification' 'BMP signaling pathway involved in spinal cord dorsal/ventral patterning') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000487 label: maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) - SubClassOf('maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' 'maturation of 5.8S rRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0017148 label: negative regulation of translation - EquivalentClasses('negative regulation of translation' 'negative regulation of translation involved in response to endoplasmic reticulum stress' ) - SubClassOf('negative regulation of translation' ObjectSomeValueFrom('negatively_regulates' 'translation')) - SubClassOf('negative regulation of translation' 'regulation of translation') - EquivalentClasses('negative regulation of translation' ObjectSomeValueFrom('negatively_regulates' 'translation') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001131 label: bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity - SubClassOf('bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000210 label: MalignantThymoma - SubClassOf('MalignantThymoma' 'Carcinoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900248 label: negative regulation of cytoplasmic translational elongation - SubClassOf('negative regulation of cytoplasmic translational elongation' 'regulation of cytoplasmic translational elongation') - SubClassOf('negative regulation of cytoplasmic translational elongation' 'negative regulation of translational elongation') - SubClassOf('negative regulation of cytoplasmic translational elongation' ObjectSomeValueFrom('negatively_regulates' 'cytoplasmic translational elongation')) - EquivalentClasses('negative regulation of cytoplasmic translational elongation' ObjectSomeValueFrom('negatively_regulates' 'cytoplasmic translational elongation') ) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_8292 label: Amphibia - SubClassOf('Amphibia' 'Tetrapoda') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031053 label: primary miRNA processing - SubClassOf('primary miRNA processing' 'ncRNA processing') - SubClassOf('primary miRNA processing' ObjectSomeValueFrom('part_of' 'production of miRNAs involved in gene silencing by miRNA')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000307 label: Rectum - SubClassOf('Rectum' 'DigestiveOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0038176 label: positive regulation of SREBP signaling pathway in response to decreased oxygen levels - SubClassOf('positive regulation of SREBP signaling pathway in response to decreased oxygen levels' 'positive regulation of SREBP signaling pathway') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000721 label: positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation - SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation' 'biological_process') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation' ) - SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033451 label: GUA codon-amino acid adaptor activity - SubClassOf('GUA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035278 label: negative regulation of translation involved in gene silencing by miRNA - SubClassOf('negative regulation of translation involved in gene silencing by miRNA' 'negative regulation of translation, ncRNA-mediated') - EquivalentClasses('negative regulation of translation involved in gene silencing by miRNA' ObjectIntersectionOf('negative regulation of translation' ObjectSomeValueFrom('part_of' 'gene silencing by miRNA')) ) - SubClassOf('negative regulation of translation involved in gene silencing by miRNA' ObjectSomeValueFrom('part_of' 'gene silencing by miRNA')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000230 label: AntibioticTreatment - SubClassOf('AntibioticTreatment' 'PharmaceuticalTreatment') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071039 label: nuclear polyadenylation-dependent CUT catabolic process - SubClassOf('nuclear polyadenylation-dependent CUT catabolic process' 'nuclear polyadenylation-dependent ncRNA catabolic process') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001062 label: propeptide - SubClassOf('propeptide' 'immature protein part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000964 label: mitochondrial RNA 5'-end processing - EquivalentClasses('mitochondrial RNA 5'-end processing' 'RNA 5'-end processing' ) - SubClassOf('mitochondrial RNA 5'-end processing' 'RNA 5'-end processing') - SubClassOf('mitochondrial RNA 5'-end processing' 'mitochondrial RNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044302 label: dentate gyrus mossy fiber - SubClassOf('dentate gyrus mossy fiber' 'axon') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010610 label: regulation of mRNA stability involved in response to stress - EquivalentClasses('regulation of mRNA stability involved in response to stress' 'regulation of mRNA stability' ) - SubClassOf('regulation of mRNA stability involved in response to stress' 'regulation of mRNA stability') - SubClassOf('regulation of mRNA stability involved in response to stress' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042345 label: regulation of NF-kappaB import into nucleus - EquivalentClasses('regulation of NF-kappaB import into nucleus' ObjectSomeValueFrom('regulates' 'NF-kappaB import into nucleus') ) - SubClassOf('regulation of NF-kappaB import into nucleus' ObjectSomeValueFrom('regulates' 'NF-kappaB import into nucleus')) - SubClassOf('regulation of NF-kappaB import into nucleus' 'regulation of I-kappaB kinase/NF-kappaB cascade') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001211 label: copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription - SubClassOf('copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription' 'metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription') - SubClassOf('copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription' 'copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001643 label: telomerase_RNA_gene - SubClassOf('telomerase_RNA_gene' 'ncRNA_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042797 label: tRNA transcription from RNA polymerase III promoter - SubClassOf('tRNA transcription from RNA polymerase III promoter' 'transcription from RNA polymerase III promoter') - SubClassOf('tRNA transcription from RNA polymerase III promoter' 'tRNA transcription') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000102 label: MuscleTissue - SubClassOf('MuscleTissue' 'AdultTissue') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_117565 label: Hyperotreti - SubClassOf('Hyperotreti' 'Craniata') --- Class Changed: http://purl.org/obo/owl/omit#GO_0021920 label: regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification' 'regulation of transcription involved in cell fate commitment') - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045975 label: positive regulation of translation, ncRNA-mediated - SubClassOf('positive regulation of translation, ncRNA-mediated' 'positive regulation of translation') - SubClassOf('positive regulation of translation, ncRNA-mediated' 'regulation of translation, ncRNA-mediated') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_9596 label: Pan - SubClassOf('Pan' 'Homininae') --- Class Changed: http://purl.org/obo/owl/omit#GO_0075526 label: cap snatching - SubClassOf('cap snatching' 'biological_process') - SubClassOf('cap snatching' ObjectSomeValueFrom('part_of' 'viral transcription')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0009047 label: dosage compensation by hyperactivation of X chromosome - SubClassOf('dosage compensation by hyperactivation of X chromosome' 'dosage compensation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000322 label: AdrenalMedulla - SubClassOf('AdrenalMedulla' 'SuprarenalGlands') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000293 label: VenaCava - SubClassOf('VenaCava' 'Vein') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900369 label: negative regulation of RNA interference - EquivalentClasses('negative regulation of RNA interference' ObjectSomeValueFrom('negatively_regulates' 'RNA interference') ) - SubClassOf('negative regulation of RNA interference' 'negative regulation of posttranscriptional gene silencing') - SubClassOf('negative regulation of RNA interference' 'negative regulation of gene silencing by RNA') - SubClassOf('negative regulation of RNA interference' ObjectSomeValueFrom('negatively_regulates' 'RNA interference')) - SubClassOf('negative regulation of RNA interference' 'regulation of RNA interference') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001063 label: plastid PEP-B RNA polymerase activity - SubClassOf('plastid PEP-B RNA polymerase activity' 'bacterial-type RNA polymerase activity') - SubClassOf('plastid PEP-B RNA polymerase activity' ObjectSomeValueFrom('part_of' 'transcription from plastid promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033409 label: UAU codon-amino acid adaptor activity - SubClassOf('UAU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071048 label: nuclear retention of unspliced pre-mRNA at the site of transcription - SubClassOf('nuclear retention of unspliced pre-mRNA at the site of transcription' 'biological_process') - SubClassOf('nuclear retention of unspliced pre-mRNA at the site of transcription' ObjectSomeValueFrom('part_of' 'nuclear mRNA surveillance of spliceosomal pre-mRNA splicing')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0052911 label: 23S rRNA (guanine(745)-N(1))-methyltransferase activity - SubClassOf('23S rRNA (guanine(745)-N(1))-methyltransferase activity' 'rRNA (guanine-N1-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000965 label: mitochondrial RNA 3'-end processing - EquivalentClasses('mitochondrial RNA 3'-end processing' 'RNA 3'-end processing' ) - SubClassOf('mitochondrial RNA 3'-end processing' 'RNA 3'-end processing') - SubClassOf('mitochondrial RNA 3'-end processing' 'mitochondrial RNA processing') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000104 label: polypeptide - SubClassOf('polypeptide' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042780 label: tRNA 3'-end processing - SubClassOf('tRNA 3'-end processing' 'tRNA processing') - SubClassOf('tRNA 3'-end processing' 'ncRNA 3'-end processing') - EquivalentClasses('tRNA 3'-end processing' 'mitochondrial tRNA 3'-end processing' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0035279 label: mRNA cleavage involved in gene silencing by miRNA - EquivalentClasses('mRNA cleavage involved in gene silencing by miRNA' ObjectIntersectionOf('mRNA cleavage' ObjectSomeValueFrom('part_of' 'gene silencing by miRNA')) ) - SubClassOf('mRNA cleavage involved in gene silencing by miRNA' 'mRNA cleavage') - SubClassOf('mRNA cleavage involved in gene silencing by miRNA' ObjectSomeValueFrom('part_of' 'gene silencing by miRNA')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000725 label: transit_peptide - SubClassOf('transit_peptide' 'immature protein part') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900247 label: regulation of cytoplasmic translational elongation - SubClassOf('regulation of cytoplasmic translational elongation' 'regulation of translational elongation') - SubClassOf('regulation of cytoplasmic translational elongation' ObjectSomeValueFrom('regulates' 'cytoplasmic translational elongation')) - EquivalentClasses('regulation of cytoplasmic translational elongation' ObjectSomeValueFrom('regulates' 'cytoplasmic translational elongation') ) - SubClassOf('regulation of cytoplasmic translational elongation' 'regulation of cytoplasmic translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061422 label: positive regulation of transcription from RNA polymerase II promoter in response to alkalinity - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to alkalinity' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001090 label: TFIIH-class binding transcription factor activity - SubClassOf('TFIIH-class binding transcription factor activity' 'RNA polymerase II basal transcription factor binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000217 label: PulmonarySquamousCellCarcinoma - SubClassOf('PulmonarySquamousCellCarcinoma' 'Carcinoma') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000180 label: ImmatureBOrTCellNeoplasm - SubClassOf('ImmatureBOrTCellNeoplasm' 'LymphoidNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006449 label: regulation of translational termination - SubClassOf('regulation of translational termination' 'regulation of translation') - SubClassOf('regulation of translational termination' ObjectSomeValueFrom('regulates' 'translational termination')) - EquivalentClasses('regulation of translational termination' ObjectSomeValueFrom('regulates' 'translational termination') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0035391 label: maintenance of chromatin silencing at silent mating-type cassette - SubClassOf('maintenance of chromatin silencing at silent mating-type cassette' ObjectSomeValueFrom('part_of' 'chromatin silencing at silent mating-type cassette')) - SubClassOf('maintenance of chromatin silencing at silent mating-type cassette' 'maintenance of chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043906 label: Ala-tRNA(Pro) hydrolase activity - SubClassOf('Ala-tRNA(Pro) hydrolase activity' 'aminoacyl-tRNA editing activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032776 label: DNA methylation on cytosine - SubClassOf('DNA methylation on cytosine' 'DNA methylation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000219 label: BronchioalveolarPulmonaryAdenocarcinoma - SubClassOf('BronchioalveolarPulmonaryAdenocarcinoma' 'PulmonaryAdenocarcinoma') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000355 label: Ovaries - SubClassOf('Ovaries' 'FemaleReproductiveSystem') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002110 label: cotranscriptional mitochondrial rRNA nucleotide insertion - SubClassOf('cotranscriptional mitochondrial rRNA nucleotide insertion' 'rRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0051039 label: positive regulation of transcription during meiosis - SubClassOf('positive regulation of transcription during meiosis' 'positive regulation of transcription, DNA-dependent') - SubClassOf('positive regulation of transcription during meiosis' 'regulation of transcription during meiosis') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000149 label: MalignantNeoplasm - SubClassOf('MalignantNeoplasm' 'Tumor') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_7711 label: Chordata - SubClassOf('Chordata' 'Deuterostomia') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060850 label: regulation of transcription involved in cell fate commitment - SubClassOf('regulation of transcription involved in cell fate commitment' 'regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of transcription involved in cell fate commitment' 'biological_process') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in cell fate commitment' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0002182 label: cytoplasmic translational elongation - SubClassOf('cytoplasmic translational elongation' 'translational elongation') - SubClassOf('cytoplasmic translational elongation' ObjectSomeValueFrom('part_of' 'cytoplasmic translation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0080149 label: sucrose induced translational repression - SubClassOf('sucrose induced translational repression' 'negative regulation of translation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033461 label: GGU codon-amino acid adaptor activity - SubClassOf('GGU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042714 label: dosage compensation complex assembly - SubClassOf('dosage compensation complex assembly' ObjectSomeValueFrom('part_of' 'dosage compensation')) - SubClassOf('dosage compensation complex assembly' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060148 label: positive regulation of posttranscriptional gene silencing - SubClassOf('positive regulation of posttranscriptional gene silencing' 'regulation of posttranscriptional gene silencing') - EquivalentClasses('positive regulation of posttranscriptional gene silencing' ObjectSomeValueFrom('positively_regulates' 'posttranscriptional gene silencing') ) - SubClassOf('positive regulation of posttranscriptional gene silencing' ObjectSomeValueFrom('positively_regulates' 'posttranscriptional gene silencing')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0039558 label: suppression by virus of host IRF7 activity by positive regulation of IRF7 sumoylation - SubClassOf('suppression by virus of host IRF7 activity by positive regulation of IRF7 sumoylation' 'suppression by virus of host IRF7 activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060965 label: negative regulation of gene silencing by miRNA - SubClassOf('negative regulation of gene silencing by miRNA' 'regulation of gene silencing by miRNA') - SubClassOf('negative regulation of gene silencing by miRNA' ObjectSomeValueFrom('negatively_regulates' 'gene silencing by miRNA')) - EquivalentClasses('negative regulation of gene silencing by miRNA' ObjectSomeValueFrom('negatively_regulates' 'gene silencing by miRNA') ) - SubClassOf('negative regulation of gene silencing by miRNA' 'negative regulation of gene silencing by RNA') - SubClassOf('negative regulation of gene silencing by miRNA' 'negative regulation of posttranscriptional gene silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097463 label: gemmule - SubClassOf('gemmule' 'neuron projection') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900463 label: negative regulation of cellular response to alkalinity by negative regulation of transcription from RNA polymerase II promoter - SubClassOf('negative regulation of cellular response to alkalinity by negative regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('negative regulation of cellular response to alkalinity by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cellular response to alkalinity by negative regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000160 label: SplenicChondroma - SubClassOf('SplenicChondroma' 'ConnectiveOrigin') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006355 label: regulation of transcription, DNA-dependent - SubClassOf('regulation of transcription, DNA-dependent' 'regulation of gene expression') - EquivalentClasses('regulation of transcription involved in G2/M transition of mitotic cell cycle' 'regulation of transcription, DNA-dependent' ) - EquivalentClasses('regulation of transcription, DNA-dependent' 'regulation of transcription involved in anterior/posterior axis specification' ) - EquivalentClasses('regulation of transcription, DNA-dependent' 'regulation of transcription during meiosis' ) - SubClassOf('regulation of transcription, DNA-dependent' ObjectSomeValueFrom('regulates' 'transcription, DNA-dependent')) - EquivalentClasses('regulation of transcription, DNA-dependent' ObjectSomeValueFrom('regulates' 'transcription, DNA-dependent') ) - EquivalentClasses('regulation of transcription, DNA-dependent' 'regulation of transcription during mitosis' ) --- Class Changed: http://purl.org/obo/owl/omit#SO_0001641 label: lincRNA_gene - SubClassOf('lincRNA_gene' 'ncRNA_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002188 label: translation reinitiation - SubClassOf('translation reinitiation' 'cytoplasmic translational initiation') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000370 label: small_regulatory_ncRNA - SubClassOf('small_regulatory_ncRNA' 'ncRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033420 label: CUG codon-amino acid adaptor activity - SubClassOf('CUG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006412 label: translation - SubClassOf('translation' 'biological_process') - EquivalentClasses('translation' 'plastid translation' ) - EquivalentClasses('translation' 'mitochondrial translation' ) - SubClassOf('translation' ObjectSomeValueFrom('part_of' 'gene expression')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000377 label: CsrB_RsmB_RNA - SubClassOf('CsrB_RsmB_RNA' 'small_regulatory_ncRNA') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000126 label: GeneticDisease - SubClassOf('GeneticDisease' 'Disease') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010690 label: negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to stress - SubClassOf('negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to stress' 'negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0072684 label: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic - EquivalentClasses('tRNA 3'-trailer cleavage, endonucleolytic' 'mitochondrial tRNA 3'-trailer cleavage, endonucleolytic' ) - SubClassOf('mitochondrial tRNA 3'-trailer cleavage, endonucleolytic' 'mitochondrial tRNA 3'-end processing') - SubClassOf('mitochondrial tRNA 3'-trailer cleavage, endonucleolytic' 'tRNA 3'-trailer cleavage, endonucleolytic') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001680 label: tRNA 3'-terminal CCA addition - SubClassOf('tRNA 3'-terminal CCA addition' 'tRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900164 label: nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry - SubClassOf('nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'nodal signaling pathway involved in determination of left/right asymmetry') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000086 label: TumorSuppressingMiRNA - SubClassOf('TumorSuppressingMiRNA' 'miRNA') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000255 label: UrinaryOrgan - SubClassOf('UrinaryOrgan' 'AnatomicFeature') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_9254 label: Prototheria - SubClassOf('Prototheria' 'Mammalia') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000996 label: predicted_gene - SubClassOf('predicted_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070923 label: siRNA loading onto RISC involved in chromatin silencing by small RNA - SubClassOf('siRNA loading onto RISC involved in chromatin silencing by small RNA' ObjectSomeValueFrom('part_of' 'chromatin silencing by small RNA')) - SubClassOf('siRNA loading onto RISC involved in chromatin silencing by small RNA' 'small RNA loading onto RISC') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071704 label: organic substance metabolic process - SubClassOf('organic substance metabolic process' 'metabolic process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071952 label: conversion of O-phosphoseryl-tRNA to cysteinyl-tRNA - SubClassOf('conversion of O-phosphoseryl-tRNA to cysteinyl-tRNA' 'charged-tRNA amino acid modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000179 label: rRNA (adenine-N6,N6-)-dimethyltransferase activity - SubClassOf('rRNA (adenine-N6,N6-)-dimethyltransferase activity' 'rRNA (adenine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045943 label: positive regulation of transcription from RNA polymerase I promoter - EquivalentClasses('positive regulation of transcription from RNA polymerase I promoter' 'positive regulation of transcription from RNA polymerase I promoter during mitosis' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase I promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase I promoter') ) - SubClassOf('positive regulation of transcription from RNA polymerase I promoter' 'positive regulation of transcription, DNA-dependent') - SubClassOf('positive regulation of transcription from RNA polymerase I promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase I promoter')) - SubClassOf('positive regulation of transcription from RNA polymerase I promoter' 'regulation of transcription from RNA polymerase I promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060146 label: host gene silencing in virus induced gene silencing - SubClassOf('host gene silencing in virus induced gene silencing' 'posttranscriptional gene silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046015 label: regulation of transcription by glucose - SubClassOf('regulation of transcription by glucose' 'carbon catabolite regulation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001220 label: cadmium ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription - SubClassOf('cadmium ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription' 'metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043628 label: ncRNA 3'-end processing - SubClassOf('ncRNA 3'-end processing' 'ncRNA processing') - SubClassOf('ncRNA 3'-end processing' 'RNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001717 label: conversion of seryl-tRNAsec to selenocys-tRNAsec - SubClassOf('conversion of seryl-tRNAsec to selenocys-tRNAsec' 'charged-tRNA amino acid modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901311 label: regulation of gene expression involved in extracellular matrix organization - SubClassOf('regulation of gene expression involved in extracellular matrix organization' ObjectSomeValueFrom('regulates' 'gene expression involved in extracellular matrix organization')) - EquivalentClasses('regulation of gene expression involved in extracellular matrix organization' ObjectSomeValueFrom('regulates' 'gene expression involved in extracellular matrix organization') ) - SubClassOf('regulation of gene expression involved in extracellular matrix organization' 'regulation of gene expression') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000161 label: SplenicFibroma - SubClassOf('SplenicFibroma' 'ConnectiveOrigin') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010609 label: mRNA localization resulting in posttranscriptional regulation of gene expression - SubClassOf('mRNA localization resulting in posttranscriptional regulation of gene expression' 'posttranscriptional regulation of gene expression') - EquivalentClasses('mRNA localization resulting in posttranscriptional regulation of gene expression' ObjectSomeValueFrom('results_in' 'posttranscriptional regulation of gene expression') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001218 label: metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription - SubClassOf('metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription' 'metal ion regulated sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription') - SubClassOf('metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription' 'metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000148 label: LeukemiaAndLymphoma - SubClassOf('LeukemiaAndLymphoma' 'Tumor') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061411 label: positive regulation of transcription from RNA polymerase II promoter in response to cold - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to cold' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000224 label: PrimaryCardiacSarcoma - SubClassOf('PrimaryCardiacSarcoma' 'Sarcoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044642 label: envenomation resulting in modulation of complement activation, alternative pathway in other organism - SubClassOf('envenomation resulting in modulation of complement activation, alternative pathway in other organism' 'biological_process') - SubClassOf('envenomation resulting in modulation of complement activation, alternative pathway in other organism' ObjectSomeValueFrom('has_part' 'modulation of complement activation, alternative pathway in other organism')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0075523 label: viral translational frameshifting - SubClassOf('viral translational frameshifting' ObjectSomeValueFrom('part_of' 'viral translation')) - SubClassOf('viral translational frameshifting' 'translational frameshifting') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_9348 label: Xenarthra - SubClassOf('Xenarthra' 'Eutheria') --- Class Changed: http://purl.org/obo/owl/omit#span_TemporalInterval label: temporal_interval - SubClassOf('temporal_interval' 'connected_temporal_region') - DisjointClasses('temporal_instant' 'temporal_interval') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000324 label: Spleen - SubClassOf('Spleen' 'HematopoieiticOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006392 label: transcription elongation from mitochondrial promoter - SubClassOf('transcription elongation from mitochondrial promoter' ObjectSomeValueFrom('part_of' 'transcription from mitochondrial promoter')) - SubClassOf('transcription elongation from mitochondrial promoter' 'DNA-dependent transcription, elongation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033448 label: AGG codon-amino acid adaptor activity - SubClassOf('AGG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#MOD_00438 label: myristoylated residue - SubClassOf('myristoylated residue' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0048787 label: presynaptic active zone membrane - SubClassOf('presynaptic active zone membrane' ObjectSomeValueFrom('part_of' 'presynaptic active zone')) - SubClassOf('presynaptic active zone membrane' 'presynaptic membrane') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000296 label: Anus - SubClassOf('Anus' 'DigestiveOrgan') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000137 label: Virallnfection - SubClassOf('Virallnfection' 'Infection') --- Class Changed: http://purl.org/obo/owl/omit#GO_0038050 label: glucocorticoid-activated sequence-specific DNA binding RNA polymerase II transcription factor activity - SubClassOf('glucocorticoid-activated sequence-specific DNA binding RNA polymerase II transcription factor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039557 label: suppression by virus of host IRF7 activity - SubClassOf('suppression by virus of host IRF7 activity' 'suppression by virus of host transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060567 label: negative regulation of DNA-dependent transcription, termination - SubClassOf('negative regulation of DNA-dependent transcription, termination' ObjectSomeValueFrom('negatively_regulates' 'DNA-dependent transcription, termination')) - SubClassOf('negative regulation of DNA-dependent transcription, termination' 'regulation of DNA-dependent transcription, termination') - SubClassOf('negative regulation of DNA-dependent transcription, termination' 'negative regulation of transcription, DNA-dependent') - EquivalentClasses('negative regulation of DNA-dependent transcription, termination' ObjectSomeValueFrom('negatively_regulates' 'DNA-dependent transcription, termination') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0008616 label: queuosine biosynthetic process - SubClassOf('queuosine biosynthetic process' 'tRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000093 label: chromoplast_gene - SubClassOf('chromoplast_gene' 'plastid_gene') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000225 label: PharmaceuticalTreatment - SubClassOf('PharmaceuticalTreatment' 'Treatment') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043170 label: macromolecule metabolic process - SubClassOf('macromolecule metabolic process' 'organic substance metabolic process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001183 label: transcription elongation from RNA polymerase I promoter for nuclear large rRNA transcript - SubClassOf('transcription elongation from RNA polymerase I promoter for nuclear large rRNA transcript' ObjectSomeValueFrom('part_of' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter')) - SubClassOf('transcription elongation from RNA polymerase I promoter for nuclear large rRNA transcript' 'transcription elongation from RNA polymerase I promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006378 label: mRNA polyadenylation - SubClassOf('mRNA polyadenylation' 'mRNA 3'-end processing') - SubClassOf('mRNA polyadenylation' 'RNA polyadenylation') --- Class Changed: http://purl.org/obo/owl/omit#span_ProcessBoundary label: process_boundary - DisjointClasses('fiat_process_part' 'process_boundary') - DisjointClasses('process' 'process'Boundary) - DisjointClasses('process_boundary' 'processual_context') - DisjointClasses('process_aggregate' 'process_boundary') - SubClassOf('process_boundary' 'processual_entity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070039 label: rRNA (guanosine-2'-O-)-methyltransferase activity - SubClassOf('rRNA (guanosine-2'-O-)-methyltransferase activity' ObjectSomeValueFrom('part_of' 'rRNA 2'-O-methylation')) - SubClassOf('rRNA (guanosine-2'-O-)-methyltransferase activity' 'rRNA (guanine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000110 label: SmoothMuscle - SubClassOf('SmoothMuscle' 'MuscleTissue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097458 label: neuron part - SubClassOf('neuron part' 'cell part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016433 label: rRNA (adenine) methyltransferase activity - SubClassOf('rRNA (adenine) methyltransferase activity' 'rRNA methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060818 label: inactivation of paternal X chromosome by genetic imprinting - SubClassOf('inactivation of paternal X chromosome by genetic imprinting' 'inactivation of paternal X chromosome') - SubClassOf('inactivation of paternal X chromosome by genetic imprinting' 'inactivation of X chromosome by genetic imprinting') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901228 label: positive regulation of transcription from RNA polymerase II promoter involved in heart development - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in heart development' ) - SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in heart development' 'positive regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in heart development' 'regulation of transcription from RNA polymerase II promoter involved in heart development') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000196 label: MultipleMyelomaSolitaryPlasmacytoma - SubClassOf('MultipleMyelomaSolitaryPlasmacytoma' 'MatureBCellNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0048097 label: long-term maintenance of gene activation - SubClassOf('long-term maintenance of gene activation' 'positive regulation of gene expression, epigenetic') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070929 label: trans-translation - SubClassOf('trans-translation' 'translational elongation') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_32523 label: Tetrapoda - SubClassOf('Tetrapoda' 'Dipnotetrapodomorpha') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031440 label: regulation of mRNA 3'-end processing - EquivalentClasses('regulation of mRNA 3'-end processing' ObjectSomeValueFrom('regulates' 'mRNA 3'-end processing') ) - SubClassOf('regulation of mRNA 3'-end processing' ObjectSomeValueFrom('regulates' 'mRNA 3'-end processing')) - SubClassOf('regulation of mRNA 3'-end processing' 'regulation of mRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001750 label: photoreceptor outer segment - SubClassOf('photoreceptor outer segment' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042794 label: rRNA transcription from plastid promoter - SubClassOf('rRNA transcription from plastid promoter' 'rRNA transcription') - SubClassOf('rRNA transcription from plastid promoter' 'transcription from plastid promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046020 label: negative regulation of transcription from RNA polymerase II promoter by pheromones - SubClassOf('negative regulation of transcription from RNA polymerase II promoter by pheromones' 'regulation of transcription from RNA polymerase II promoter by pheromones') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter by pheromones' 'positive regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones' ) - SubClassOf('negative regulation of transcription from RNA polymerase II promoter by pheromones' 'negative regulation of transcription by pheromones') - SubClassOf('negative regulation of transcription from RNA polymerase II promoter by pheromones' 'negative regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000147 label: IntermediateGradeNeoplasm - SubClassOf('IntermediateGradeNeoplasm' 'Tumor') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044225 label: apical pole of neuron - SubClassOf('apical pole of neuron' 'neuron part') - SubClassOf('apical pole of neuron' ObjectSomeValueFrom('part_of' 'neuronal cell body')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001187 label: RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity - SubClassOf('RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase I transcriptional preinitiation complex assembly at the promoter for the nuclear large rRNA transcript')) - SubClassOf('RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity' 'RNA polymerase I transcription factor recruiting transcription factor activity') - SubClassOf('RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity' 'RNA polymerase I CORE element sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0072692 label: chromatin silencing at centromere central core - SubClassOf('chromatin silencing at centromere central core' 'chromatin silencing at centromere') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001088 label: TFIIE-class binding transcription factor activity - SubClassOf('TFIIE-class binding transcription factor activity' 'RNA polymerase II basal transcription factor binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_9577 label: Hylobatidae - SubClassOf('Hylobatidae' 'Hominoidea') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097394 label: telomeric RNA transcription from RNA pol II promoter - SubClassOf('telomeric RNA transcription from RNA pol II promoter' 'transcription from RNA polymerase II promoter') - SubClassOf('telomeric RNA transcription from RNA pol II promoter' 'telomeric RNA transcription') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000384 label: OxyS_RNA - SubClassOf('OxyS_RNA' 'small_regulatory_ncRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070156 label: mitochondrial phenylalanyl-tRNA aminoacylation - SubClassOf('mitochondrial phenylalanyl-tRNA aminoacylation' 'phenylalanyl-tRNA aminoacylation') - SubClassOf('mitochondrial phenylalanyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') - EquivalentClasses('phenylalanyl-tRNA aminoacylation' 'mitochondrial phenylalanyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_9347 label: Eutheria - SubClassOf('Eutheria' 'Theria') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097457 label: hippocampal mossy fiber - SubClassOf('hippocampal mossy fiber' 'dentate gyrus mossy fiber') --- Class Changed: http://purl.org/obo/owl/omit#GO_0003130 label: BMP signaling pathway involved in heart induction - SubClassOf('BMP signaling pathway involved in heart induction' 'regulation of transcription involved in cell fate commitment') - SubClassOf('BMP signaling pathway involved in heart induction' 'BMP signaling pathway involved in heart development') - EquivalentClasses('BMP signaling pathway involved in heart induction' 'BMP signaling pathway' ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000105 label: Blood - SubClassOf('Blood' 'ConnectiveTissue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033119 label: negative regulation of RNA splicing - SubClassOf('negative regulation of RNA splicing' 'regulation of RNA splicing') - SubClassOf('negative regulation of RNA splicing' ObjectSomeValueFrom('negatively_regulates' 'RNA splicing')) - EquivalentClasses('negative regulation of RNA splicing' ObjectSomeValueFrom('negatively_regulates' 'RNA splicing') ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000216 label: PulmonarySmallCellCarcinoma - SubClassOf('PulmonarySmallCellCarcinoma' 'Carcinoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043123 label: positive regulation of I-kappaB kinase/NF-kappaB cascade - EquivalentClasses('positive regulation of I-kappaB kinase/NF-kappaB cascade' ObjectSomeValueFrom('positively_regulates' 'I-kappaB kinase/NF-kappaB cascade') ) - SubClassOf('positive regulation of I-kappaB kinase/NF-kappaB cascade' ObjectSomeValueFrom('positively_regulates' 'I-kappaB kinase/NF-kappaB cascade')) - SubClassOf('positive regulation of I-kappaB kinase/NF-kappaB cascade' 'regulation of I-kappaB kinase/NF-kappaB cascade') --- Class Changed: http://purl.org/obo/owl/omit#GO_0038107 label: nodal signaling pathway involved in determination of left/right asymmetry - SubClassOf('nodal signaling pathway involved in determination of left/right asymmetry' 'regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001075 label: RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly - SubClassOf('RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly' 'RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity') - SubClassOf('RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'RNA polymerase II transcriptional preinitiation complex assembly')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0072367 label: regulation of lipid transport by regulation of transcription from RNA polymerase II promoter - EquivalentClasses('regulation of lipid transport by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) - SubClassOf('regulation of lipid transport by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070935 label: 3'-UTR-mediated mRNA stabilization - SubClassOf('3'-UTR-mediated mRNA stabilization' 'mRNA stabilization') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033447 label: AGA codon-amino acid adaptor activity - SubClassOf('AGA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000060 label: Leukocyte - SubClassOf('Leukocyte' 'ConnectiveTissueCell') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000410 label: negative regulation of transcription by galactose - SubClassOf('negative regulation of transcription by galactose' 'carbon catabolite repression of transcription') - SubClassOf('negative regulation of transcription by galactose' 'regulation of transcription by galactose') --- Class Changed: http://purl.org/obo/owl/omit#GO_0051718 label: DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates - SubClassOf('DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates' 'DNA (cytosine-5-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000313 label: Pancreas - SubClassOf('Pancreas' 'EndocrineOrgan') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_0000436 label: Xenacoelomorpha - SubClassOf('Xenacoelomorpha' 'Deuterostomia') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900411 label: regulation of histone acetylation by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of histone acetylation by regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of histone acetylation by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of histone acetylation by regulation of transcription from RNA polymerase II promoter' 'regulation of histone modification by regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033449 label: GUU codon-amino acid adaptor activity - SubClassOf('GUU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#span_Process label: process - DisjointClasses('process' 'process'ualContext) - DisjointClasses('process' 'process'Boundary) - DisjointClasses('process' 'process'Aggregate) - DisjointClasses('fiat_process_part' 'process') - SubClassOf('process' 'process'ualEntity) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000204 label: Sarcoma - SubClassOf('Sarcoma' 'MalignantNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061405 label: positive regulation of transcription from RNA polymerase II promoter in response to hydrostatic pressure - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to hydrostatic pressure' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000963 label: mitochondrial RNA processing - SubClassOf('mitochondrial RNA processing' 'biological_process') - EquivalentClasses('mitochondrial RNA processing' 'RNA processing' ) - SubClassOf('mitochondrial RNA processing' 'RNA processing') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000720 label: foreign_transposable_element - SubClassOf('foreign_transposable_element' 'transposable_element') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001066 label: plastid single subunit type RNA polymerase activity - SubClassOf('plastid single subunit type RNA polymerase activity' ObjectSomeValueFrom('part_of' 'transcription from plastid promoter')) - SubClassOf('plastid single subunit type RNA polymerase activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000480 label: endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - SubClassOf('endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) - SubClassOf('endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000057 label: NerveTissueCell - SubClassOf('NerveTissueCell' 'cell') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001061 label: bacterial-type RNA polymerase activity - SubClassOf('bacterial-type RNA polymerase activity' ObjectSomeValueFrom('part_of' 'transcription from bacterial-type RNA polymerase promoter')) - SubClassOf('bacterial-type RNA polymerase activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060733 label: regulation of eIF2 alpha phosphorylation by amino acid starvation - SubClassOf('regulation of eIF2 alpha phosphorylation by amino acid starvation' ObjectSomeValueFrom('regulates' 'regulation of translational initiation by eIF2 alpha phosphorylation')) - SubClassOf('regulation of eIF2 alpha phosphorylation by amino acid starvation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002130 label: wobble position ribose methylation - SubClassOf('wobble position ribose methylation' 'tRNA nucleoside ribose methylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010495 label: long-distance posttranscriptional gene silencing - SubClassOf('long-distance posttranscriptional gene silencing' 'posttranscriptional gene silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033432 label: CGG codon-amino acid adaptor activity - SubClassOf('CGG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070476 label: rRNA (guanine-N7)-methylation - SubClassOf('rRNA (guanine-N7)-methylation' 'RNA (guanine-N7)-methylation') - SubClassOf('rRNA (guanine-N7)-methylation' 'rRNA base methylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090116 label: C-5 methylation of cytosine - SubClassOf('C-5 methylation of cytosine' 'DNA methylation on cytosine') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001739 label: gene_with_non_canonical_start_codon - SubClassOf('gene_with_non_canonical_start_codon' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#snap_IndependentContinuant label: independent_continuant - EquivalentClasses('independent_continuant' ObjectUnionOf('material_entity' 'object_boundary' 'site') ) - SubClassOf('independent_continuant' 'continuant') - DisjointClasses('independent_continuant' 'spatial_region') - DisjointClasses('dependent_continuant' 'independent_continuant') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000265 label: IliacArtery - SubClassOf('IliacArtery' 'Artery') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000087 label: nuclear_gene - SubClassOf('nuclear_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000261 label: BrachialArtery - SubClassOf('BrachialArtery' 'Artery') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901195 label: positive regulation of formation of translation preinitiation complex - SubClassOf('positive regulation of formation of translation preinitiation complex' 'regulation of formation of translation preinitiation complex') - SubClassOf('positive regulation of formation of translation preinitiation complex' ObjectSomeValueFrom('positively_regulates' 'formation of translation preinitiation complex')) - EquivalentClasses('positive regulation of formation of translation preinitiation complex' ObjectSomeValueFrom('positively_regulates' 'formation of translation preinitiation complex') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0034959 label: endothelin maturation - SubClassOf('endothelin maturation' 'peptide hormone processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0022417 label: protein maturation by protein folding - SubClassOf('protein maturation by protein folding' 'protein maturation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002161 label: aminoacyl-tRNA editing activity - SubClassOf('aminoacyl-tRNA editing activity' ObjectSomeValueFrom('part_of' 'regulation of translational fidelity')) - SubClassOf('aminoacyl-tRNA editing activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046778 label: modification by virus of host mRNA processing - SubClassOf('modification by virus of host mRNA processing' 'modulation by virus of host gene expression') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000258 label: Vein - SubClassOf('Vein' 'CardiovascularFeature') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000165 label: SplenicHemangioma - SubClassOf('SplenicHemangioma' 'EpithelialOrigin') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001720 label: conversion of lysyl-tRNA to pyrrolysyl-tRNA - SubClassOf('conversion of lysyl-tRNA to pyrrolysyl-tRNA' 'charged-tRNA amino acid modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044629 label: negative regulation of complement activation, classical pathway in other organism - SubClassOf('negative regulation of complement activation, classical pathway in other organism' 'negative regulation of complement activation, classical pathway') - SubClassOf('negative regulation of complement activation, classical pathway in other organism' 'modulation of complement activation, classical pathway in other organism') --- Class Changed: http://purl.org/obo/owl/omit#GO_0019083 label: viral transcription - SubClassOf('viral transcription' ObjectSomeValueFrom('part_of' 'viral genome expression')) - SubClassOf('viral transcription' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0008176 label: tRNA (guanine-N7-)-methyltransferase activity - SubClassOf('tRNA (guanine-N7-)-methyltransferase activity' 'tRNA (guanine) methyltransferase activity') - SubClassOf('tRNA (guanine-N7-)-methyltransferase activity' ObjectSomeValueFrom('part_of' 'RNA (guanine-N7)-methylation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0016428 label: tRNA (cytosine-5-)-methyltransferase activity - SubClassOf('tRNA (cytosine-5-)-methyltransferase activity' 'tRNA (cytosine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000205 label: ColorectalAdenocarcinoma - SubClassOf('ColorectalAdenocarcinoma' 'Carcinoma') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000252 label: NervousOrgan - SubClassOf('NervousOrgan' 'AnatomicFeature') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000635 label: negative regulation of primary miRNA processing - SubClassOf('negative regulation of primary miRNA processing' 'regulation of primary miRNA processing') - EquivalentClasses('negative regulation of primary miRNA processing' ObjectSomeValueFrom('negatively_regulates' 'primary miRNA processing') ) - SubClassOf('negative regulation of primary miRNA processing' ObjectSomeValueFrom('negatively_regulates' 'primary miRNA processing')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000390 label: spliceosomal complex disassembly - SubClassOf('spliceosomal complex disassembly' 'biological_process') - SubClassOf('spliceosomal complex disassembly' ObjectSomeValueFrom('part_of' 'mRNA splicing, via spliceosome')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0039657 label: suppression by virus of host gene expression - SubClassOf('suppression by virus of host gene expression' 'negative regulation of gene expression') - SubClassOf('suppression by virus of host gene expression' 'modulation by virus of host gene expression') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000801 label: TEJuxtaposition - SubClassOf('TEJuxtaposition' 'biological_region') - SubClassOf('TEJuxtaposition' ObjectSomeValueFrom('resultedFrom' 'TEInsertion')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001157 label: RNA polymerase III type 1 promoter TFIIIB recruiting transcription factor activity - SubClassOf('RNA polymerase III type 1 promoter TFIIIB recruiting transcription factor activity' 'RNA polymerase III transcription factor recruiting transcription factor activity') - SubClassOf('RNA polymerase III type 1 promoter TFIIIB recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III type 1 promoter transcriptional preinitiation complex assembly')) --- Class Changed: http://purl.org/obo/owl/omit#snap_FiatObjectPart label: fiat_object_part - DisjointClasses('fiat_object_part' 'object_aggregate') - DisjointClasses('fiat_object_part' 'object_boundary') - DisjointClasses('fiat_object_part' 'object') - SubClassOf('fiat_object_part' 'material_entity') - DisjointClasses('fiat_object_part' 'site') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900365 label: positive regulation of mRNA polyadenylation - SubClassOf('positive regulation of mRNA polyadenylation' ObjectSomeValueFrom('positively_regulates' 'mRNA polyadenylation')) - SubClassOf('positive regulation of mRNA polyadenylation' 'regulation of mRNA polyadenylation') - EquivalentClasses('positive regulation of mRNA polyadenylation' ObjectSomeValueFrom('positively_regulates' 'mRNA polyadenylation') ) - SubClassOf('positive regulation of mRNA polyadenylation' 'positive regulation of mRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033454 label: GCC codon-amino acid adaptor activity - SubClassOf('GCC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001189 label: RNA polymerase I transcriptional preinitiation complex assembly at the promoter for the nuclear large rRNA transcript - SubClassOf('RNA polymerase I transcriptional preinitiation complex assembly at the promoter for the nuclear large rRNA transcript' 'RNA polymerase I transcriptional preinitiation complex assembly') - SubClassOf('RNA polymerase I transcriptional preinitiation complex assembly at the promoter for the nuclear large rRNA transcript' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase I promoter for nuclear large rRNA transcript')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000250 label: LymphaticOrgan - SubClassOf('LymphaticOrgan' 'AnatomicFeature') --- Class Changed: http://purl.org/obo/owl/omit#GO_0022024 label: BMP signaling pathway involved in forebrain neuron fate commitment - SubClassOf('BMP signaling pathway involved in forebrain neuron fate commitment' 'BMP signaling pathway') - SubClassOf('BMP signaling pathway involved in forebrain neuron fate commitment' 'regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment') - EquivalentClasses('BMP signaling pathway involved in forebrain neuron fate commitment' 'BMP signaling pathway' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0070868 label: heterochromatin organization involved in chromatin silencing - SubClassOf('heterochromatin organization involved in chromatin silencing' ObjectSomeValueFrom('part_of' 'chromatin silencing')) - EquivalentClasses('heterochromatin organization involved in chromatin silencing' ObjectSomeValueFrom('part_of' 'chromatin silencing') ) - SubClassOf('heterochromatin organization involved in chromatin silencing' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032088 label: negative regulation of NF-kappaB transcription factor activity - SubClassOf('negative regulation of NF-kappaB transcription factor activity' 'negative regulation of sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000316 label: Pituitary - SubClassOf('Pituitary' 'EndocrineOrgan') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000111 label: transposable_element_gene - SubClassOf('transposable_element_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001008 label: RNA polymerase III type 2 promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity - SubClassOf('RNA polymerase III type 2 promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III type 2 promoter transcriptional preinitiation complex assembly')) - SubClassOf('RNA polymerase III type 2 promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity' 'RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0052915 label: 23S rRNA (guanine(2445)-N(2))-methyltransferase activity - SubClassOf('23S rRNA (guanine(2445)-N(2))-methyltransferase activity' 'rRNA (guanine-N2-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000288 label: engineered_fusion_gene - SubClassOf('engineered_fusion_gene' 'fusion_gene') - SubClassOf('engineered_fusion_gene' 'engineered_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900146 label: negative regulation of nodal signaling pathway involved in determination of left/right asymmetry - SubClassOf('negative regulation of nodal signaling pathway involved in determination of left/right asymmetry' ObjectSomeValueFrom('negatively_regulates' 'nodal signaling pathway involved in determination of left/right asymmetry')) - EquivalentClasses('negative regulation of nodal signaling pathway involved in determination of left/right asymmetry' ObjectSomeValueFrom('negatively_regulates' 'nodal signaling pathway involved in determination of left/right asymmetry') ) - SubClassOf('negative regulation of nodal signaling pathway involved in determination of left/right asymmetry' 'regulation of nodal signaling pathway involved in determination of left/right asymmetry') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001176 label: transcriptional start site selection at bacterial-type RNA polymerase promoter - SubClassOf('transcriptional start site selection at bacterial-type RNA polymerase promoter' 'DNA-dependent transcriptional start site selection') - SubClassOf('transcriptional start site selection at bacterial-type RNA polymerase promoter' ObjectSomeValueFrom('part_of' 'transcription initiation from bacterial-type RNA polymerase promoter')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000376 label: RNA_6S - SubClassOf('RNA_6S' 'small_regulatory_ncRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001123 label: transcription initiation from bacterial-type RNA polymerase promoter - SubClassOf('transcription initiation from bacterial-type RNA polymerase promoter' ObjectSomeValueFrom('part_of' 'transcription from bacterial-type RNA polymerase promoter')) - SubClassOf('transcription initiation from bacterial-type RNA polymerase promoter' 'DNA-dependent transcription, initiation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035959 label: positive regulation of glyoxylate cycle by positive regulation of transcription from RNA polymerase II promoter - EquivalentClasses('positive regulation of glyoxylate cycle by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) - SubClassOf('positive regulation of glyoxylate cycle by positive regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of glyoxylate cycle by positive regulation of transcription from RNA polymerase II promoter' 'regulation of glyoxylate cycle by regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0003886 label: DNA (cytosine-5-)-methyltransferase activity - SubClassOf('DNA (cytosine-5-)-methyltransferase activity' 'DNA-methyltransferase activity') - SubClassOf('DNA (cytosine-5-)-methyltransferase activity' ObjectSomeValueFrom('part_of' 'C-5 methylation of cytosine')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0045871 label: negative regulation of rhodopsin gene expression - SubClassOf('negative regulation of rhodopsin gene expression' 'negative regulation of gene expression') - SubClassOf('negative regulation of rhodopsin gene expression' 'regulation of rhodopsin gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061157 label: mRNA destabilization - SubClassOf('mRNA destabilization' 'regulation of mRNA stability') - SubClassOf('mRNA destabilization' 'RNA destabilization') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033430 label: CGC codon-amino acid adaptor activity - SubClassOf('CGC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001023 label: transcription initiation from RNA polymerase III type 2 promoter - SubClassOf('transcription initiation from RNA polymerase III type 2 promoter' 'transcription initiation from RNA polymerase III promoter') - SubClassOf('transcription initiation from RNA polymerase III type 2 promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III type 2 promoter')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000342 label: Cerebrum - SubClassOf('Cerebrum' 'Brain') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000477 label: generation of mature 5'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - SubClassOf('generation of mature 5'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'rRNA 5'-end processing') - SubClassOf('generation of mature 5'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'cleavage involved in rRNA processing') - SubClassOf('generation of mature 5'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0003700 label: sequence-specific DNA binding transcription factor activity - SubClassOf('sequence-specific DNA binding transcription factor activity' 'biological_process') - SubClassOf('sequence-specific DNA binding transcription factor activity' ObjectSomeValueFrom('part_of' 'regulation of transcription, DNA-dependent')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0044541 label: zymogen activation in other organism - SubClassOf('zymogen activation in other organism' 'zymogen activation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044641 label: envenomation resulting in positive regulation of complement activation, lectin pathway in other organism - SubClassOf('envenomation resulting in positive regulation of complement activation, lectin pathway in other organism' ObjectSomeValueFrom('has_part' 'positive regulation of complement activation, lectin pathway in other organism')) - SubClassOf('envenomation resulting in positive regulation of complement activation, lectin pathway in other organism' 'envenomation resulting in modulation of complement activation, lectin pathway in other organism') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032939 label: positive regulation of translation in response to oxidative stress - SubClassOf('positive regulation of translation in response to oxidative stress' 'regulation of translation in response to oxidative stress') - SubClassOf('positive regulation of translation in response to oxidative stress' 'positive regulation of translation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031426 label: polycistronic mRNA processing - SubClassOf('polycistronic mRNA processing' 'mRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000472 label: endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - SubClassOf('endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'rRNA 5'-end processing') - SubClassOf('endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) - SubClassOf('endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)') --- Class Changed: http://purl.org/obo/owl/omit#GO_0009301 label: snRNA transcription - SubClassOf('snRNA transcription' 'transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045994 label: positive regulation of translational initiation by iron - SubClassOf('positive regulation of translational initiation by iron' 'positive regulation of translational initiation') - SubClassOf('positive regulation of translational initiation by iron' 'regulation of translational initiation by iron') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001082 label: RNA polymerase I transcription factor binding transcription factor activity - SubClassOf('RNA polymerase I transcription factor binding transcription factor activity' 'biological_process') - SubClassOf('RNA polymerase I transcription factor binding transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter')) - SubClassOf('RNA polymerase I transcription factor binding transcription factor activity' ObjectSomeValueFrom('part_of' 'regulation of transcription from RNA polymerase I promoter')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000041 label: HarmfulEnvironmentalEffect - SubClassOf('HarmfulEnvironmentalEffect' 'HarmfulRole') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045960 label: positive regulation of complement activation, classical pathway - SubClassOf('positive regulation of complement activation, classical pathway' 'positive regulation of complement activation') - SubClassOf('positive regulation of complement activation, classical pathway' 'regulation of complement activation, classical pathway') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001058 label: RNA polymerase V activity - SubClassOf('RNA polymerase V activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase V promoter')) - EquivalentClasses('RNA polymerase V activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase V promoter') ) - SubClassOf('RNA polymerase V activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043556 label: regulation of translation in response to oxidative stress - SubClassOf('regulation of translation in response to oxidative stress' 'regulation of translation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035105 label: sterol regulatory element binding protein import into nucleus - SubClassOf('sterol regulatory element binding protein import into nucleus' ObjectSomeValueFrom('part_of' 'SREBP signaling pathway')) - SubClassOf('sterol regulatory element binding protein import into nucleus' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0008988 label: rRNA (adenine-N6-)-methyltransferase activity - SubClassOf('rRNA (adenine-N6-)-methyltransferase activity' 'rRNA (adenine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000636 label: positive regulation of primary miRNA processing - SubClassOf('positive regulation of primary miRNA processing' ObjectSomeValueFrom('positively_regulates' 'primary miRNA processing')) - EquivalentClasses('positive regulation of primary miRNA processing' ObjectSomeValueFrom('positively_regulates' 'primary miRNA processing') ) - SubClassOf('positive regulation of primary miRNA processing' 'regulation of primary miRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001055 label: RNA polymerase II activity - SubClassOf('RNA polymerase II activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter')) - EquivalentClasses('RNA polymerase II activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter') ) - SubClassOf('RNA polymerase II activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070129 label: regulation of mitochondrial translation - SubClassOf('regulation of mitochondrial translation' ObjectSomeValueFrom('regulates' 'mitochondrial translation')) - SubClassOf('regulation of mitochondrial translation' 'regulation of translation') - EquivalentClasses('regulation of mitochondrial translation' ObjectSomeValueFrom('regulates' 'mitochondrial translation') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_1900368 label: regulation of RNA interference - SubClassOf('regulation of RNA interference' 'regulation of posttranscriptional gene silencing') - EquivalentClasses('regulation of RNA interference' ObjectSomeValueFrom('regulates' 'RNA interference') ) - SubClassOf('regulation of RNA interference' ObjectSomeValueFrom('regulates' 'RNA interference')) - SubClassOf('regulation of RNA interference' 'regulation of gene silencing by RNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001177 label: regulation of transcriptional open complex formation at RNA polymerase II promoter - EquivalentClasses('regulation of transcriptional open complex formation at RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcriptional open complex formation at RNA polymerase II promoter') ) - SubClassOf('regulation of transcriptional open complex formation at RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcriptional open complex formation at RNA polymerase II promoter')) - SubClassOf('regulation of transcriptional open complex formation at RNA polymerase II promoter' 'regulation of transcription initiation from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097239 label: positive regulation of transcription from RNA polymerase II promoter in response to methylglyoxal - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to methylglyoxal' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900375 label: positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0043484 label: regulation of RNA splicing - SubClassOf('regulation of RNA splicing' ObjectSomeValueFrom('regulates' 'RNA splicing')) - SubClassOf('regulation of RNA splicing' 'regulation of gene expression') - EquivalentClasses('regulation of RNA splicing' ObjectSomeValueFrom('regulates' 'RNA splicing') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0072344 label: rescue of stalled ribosome - SubClassOf('rescue of stalled ribosome' 'translational elongation') - SubClassOf('rescue of stalled ribosome' 'regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031124 label: mRNA 3'-end processing - SubClassOf('mRNA 3'-end processing' 'mRNA processing') - SubClassOf('mRNA 3'-end processing' 'RNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000234 label: mRNA - SubClassOf('mRNA' 'mature_transcript') --- Class Changed: http://purl.org/obo/owl/omit#GO_0008989 label: rRNA (guanine-N1-)-methyltransferase activity - SubClassOf('rRNA (guanine-N1-)-methyltransferase activity' 'rRNA (guanine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001272 label: tRNA_gene - SubClassOf('tRNA_gene' 'ncRNA_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001146 label: mitochondrial RNA polymerase terminator site sequence-specific DNA binding transcription factor activity - SubClassOf('mitochondrial RNA polymerase terminator site sequence-specific DNA binding transcription factor activity' ObjectSomeValueFrom('part_of' 'termination of mitochondrial transcription')) - SubClassOf('mitochondrial RNA polymerase terminator site sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding mitochondrial RNA polymerase transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036260 label: RNA capping - SubClassOf('RNA capping' 'RNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060147 label: regulation of posttranscriptional gene silencing - SubClassOf('regulation of posttranscriptional gene silencing' 'regulation of gene silencing') - SubClassOf('regulation of posttranscriptional gene silencing' ObjectSomeValueFrom('regulates' 'posttranscriptional gene silencing')) - EquivalentClasses('regulation of posttranscriptional gene silencing' ObjectSomeValueFrom('regulates' 'posttranscriptional gene silencing') ) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000456 label: recombinationally_rearranged_gene - SubClassOf('recombinationally_rearranged_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900417 label: negative regulation of transmembrane transport by negative regulation of transcription from RNA polymerase II promoter - SubClassOf('negative regulation of transmembrane transport by negative regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('negative regulation of transmembrane transport by negative regulation of transcription from RNA polymerase II promoter' 'regulation of transport by negative regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transmembrane transport by negative regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_1900427 label: regulation of cellular response to oxidative stress by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of cellular response to oxidative stress by regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('regulation of cellular response to oxidative stress by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of cellular response to oxidative stress by regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001128 label: RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly - SubClassOf('RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'RNA polymerase II transcriptional preinitiation complex assembly')) - SubClassOf('RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly' 'RNA polymerase II transcription coactivator activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006361 label: transcription initiation from RNA polymerase I promoter - SubClassOf('transcription initiation from RNA polymerase I promoter' 'DNA-dependent transcription, initiation') - SubClassOf('transcription initiation from RNA polymerase I promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0060196 label: positive regulation of antisense RNA transcription - SubClassOf('positive regulation of antisense RNA transcription' 'positive regulation of transcription, DNA-dependent') - SubClassOf('positive regulation of antisense RNA transcription' ObjectSomeValueFrom('positively_regulates' 'antisense RNA transcription')) - EquivalentClasses('positive regulation of antisense RNA transcription' ObjectSomeValueFrom('positively_regulates' 'antisense RNA transcription') ) - SubClassOf('positive regulation of antisense RNA transcription' 'regulation of antisense RNA transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0075525 label: viral translational termination-reinitiation - SubClassOf('viral translational termination-reinitiation' 'biological_process') - SubClassOf('viral translational termination-reinitiation' ObjectSomeValueFrom('part_of' 'viral translation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0034982 label: mitochondrial protein processing - SubClassOf('mitochondrial protein processing' 'biological_process') - SubClassOf('mitochondrial protein processing' 'protein processing') --- Class Changed: http://purl.org/obo/owl/omit#span_ScatteredTemporalRegion label: scattered_temporal_region - SubClassOf('scattered_temporal_region' 'temporal_region') - DisjointClasses('connected_temporal_region' 'scattered_temporal_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045991 label: carbon catabolite activation of transcription - SubClassOf('carbon catabolite activation of transcription' 'positive regulation of transcription, DNA-dependent') - SubClassOf('carbon catabolite activation of transcription' 'carbon catabolite regulation of transcription') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000091 label: apicoplast_gene - SubClassOf('apicoplast_gene' 'plastid_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097465 label: somatic spine - SubClassOf('somatic spine' 'neuron spine') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030449 label: regulation of complement activation - SubClassOf('regulation of complement activation' 'regulation of protein processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000201 label: MycosisFungoidesSezarySyndrome - SubClassOf('MycosisFungoidesSezarySyndrome' 'MatureTOrNKCellNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001270 label: stRNA_gene - SubClassOf('stRNA_gene' 'ncRNA_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044631 label: positive regulation of complement activation, lectin pathway in other organism - SubClassOf('positive regulation of complement activation, lectin pathway in other organism' 'modulation of complement activation, lectin pathway in other organism') - SubClassOf('positive regulation of complement activation, lectin pathway in other organism' 'positive regulation of complement activation, lectin pathway') --- Class Changed: http://purl.org/obo/owl/omit#span_ConnectedTemporalRegion label: connected_temporal_region - DisjointClasses('connected_temporal_region' 'scattered_temporal_region') - SubClassOf('connected_temporal_region' 'temporal_region') - EquivalentClasses('connected_temporal_region' ObjectUnionOf('temporal_instant' 'temporal_interval') ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000259 label: Aorta - SubClassOf('Aorta' 'Artery') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044296 label: dendritic tuft - SubClassOf('dendritic tuft' 'dendrite terminus') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097235 label: positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0060962 label: regulation of ribosomal protein gene transcription from RNA polymerase II promoter - SubClassOf('regulation of ribosomal protein gene transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001268 label: snRNA_gene - SubClassOf('snRNA_gene' 'ncRNA_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031119 label: tRNA pseudouridine synthesis - EquivalentClasses('tRNA pseudouridine synthesis' 'mitochondrial tRNA pseudouridine synthesis' ) - SubClassOf('tRNA pseudouridine synthesis' 'tRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0072363 label: regulation of glycolysis by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of glycolysis by positive regulation of transcription from RNA polymerase II promoter' 'regulation of glycolysis by regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of glycolysis by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) - SubClassOf('regulation of glycolysis by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010620 label: negative regulation of transcription by transcription factor catabolism - SubClassOf('negative regulation of transcription by transcription factor catabolism' 'negative regulation of transcription, DNA-dependent') - EquivalentClasses('negative regulation of transcription by transcription factor catabolism' ObjectSomeValueFrom('results_in' 'negative regulation of transcription, DNA-dependent') ) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_117571 label: Euteleostomi - SubClassOf('Euteleostomi' 'Teleostomi') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002542 label: Factor XII activation - SubClassOf('Factor XII activation' 'positive regulation of protein processing') - SubClassOf('Factor XII activation' ObjectSomeValueFrom('positively_regulates' 'activation of plasma proteins involved in acute inflammatory response')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0031638 label: zymogen activation - SubClassOf('zymogen activation' 'protein processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000211 label: PulmonaryAdenocarcinoma - SubClassOf('PulmonaryAdenocarcinoma' 'Carcinoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000638 label: regulation of SREBP signaling pathway - SubClassOf('regulation of SREBP signaling pathway' 'biological_process') - EquivalentClasses('regulation of SREBP signaling pathway' ObjectSomeValueFrom('regulates' 'SREBP signaling pathway') ) - SubClassOf('regulation of SREBP signaling pathway' ObjectSomeValueFrom('regulates' 'SREBP signaling pathway')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0007252 label: I-kappaB phosphorylation - SubClassOf('I-kappaB phosphorylation' 'biological_process') - SubClassOf('I-kappaB phosphorylation' ObjectSomeValueFrom('part_of' 'I-kappaB kinase/NF-kappaB cascade')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0035195 label: gene silencing by miRNA - SubClassOf('gene silencing by miRNA' 'posttranscriptional gene silencing by RNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044640 label: envenomation resulting in negative regulation of complement activation, lectin pathway in other organism - SubClassOf('envenomation resulting in negative regulation of complement activation, lectin pathway in other organism' ObjectSomeValueFrom('has_part' 'negative regulation of complement activation, lectin pathway in other organism')) - SubClassOf('envenomation resulting in negative regulation of complement activation, lectin pathway in other organism' 'envenomation resulting in modulation of complement activation, lectin pathway in other organism') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000198 label: AdultTCellLeukemiaLymphoma - SubClassOf('AdultTCellLeukemiaLymphoma' 'MatureTOrNKCellNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044301 label: climbing fiber - SubClassOf('climbing fiber' 'axon') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900400 label: regulation of iron ion import by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of iron ion import by regulation of transcription from RNA polymerase II promoter' 'regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of iron ion import by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of iron ion import by regulation of transcription from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044317 label: rod spherule - SubClassOf('rod spherule' 'neuron projection') --- Class Changed: http://purl.org/obo/owl/omit#GO_1990024 label: C bouton - SubClassOf('C bouton' 'terminal bouton') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_66780 label: Gnathostomulida - SubClassOf('Gnathostomulida' 'Bilateria') --- Class Changed: http://purl.org/obo/owl/omit#GO_0038005 label: peptide bond cleavage involved in epidermal growth factor receptor ligand maturation - SubClassOf('peptide bond cleavage involved in epidermal growth factor receptor ligand maturation' 'protein processing') - EquivalentClasses('peptide bond cleavage involved in epidermal growth factor receptor ligand maturation' ObjectIntersectionOf('protein processing' ObjectSomeValueFrom('part_of' 'epidermal growth factor receptor ligand maturation')) ) - SubClassOf('peptide bond cleavage involved in epidermal growth factor receptor ligand maturation' ObjectSomeValueFrom('part_of' 'epidermal growth factor receptor ligand maturation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000999 label: RNA polymerase III type 1 promoter transcriptional preinitiation complex assembly - SubClassOf('RNA polymerase III type 1 promoter transcriptional preinitiation complex assembly' 'RNA polymerase III transcriptional preinitiation complex assembly') - SubClassOf('RNA polymerase III type 1 promoter transcriptional preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase III type 1 promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0042779 label: tRNA 3'-trailer cleavage - SubClassOf('tRNA 3'-trailer cleavage' 'tRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000282 label: mRNA_with_minus_1_frameshift - SubClassOf('mRNA_with_minus_1_frameshift' 'mRNA_with_frameshift') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002541 label: activation of plasma proteins involved in acute inflammatory response - SubClassOf('activation of plasma proteins involved in acute inflammatory response' 'protein processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900472 label: positive regulation of phosphatidylcholine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of phosphatidylcholine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('positive regulation of phosphatidylcholine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of phospholipid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of phosphatidylcholine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000177 label: PolycythemiaVera - SubClassOf('PolycythemiaVera' 'ChronicMyeloproliferativeDisorders') --- Class Changed: http://purl.org/obo/owl/omit#MOD_01048 label: 2-pyrrolidone-5-carboxylic acid - SubClassOf('2-pyrrolidone-5-carboxylic acid' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001237 label: amino_acid - SubClassOf('amino_acid' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000531 label: regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000329 label: LymphaticVessels - SubClassOf('LymphaticVessels' 'LymphaticOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042789 label: mRNA transcription from RNA polymerase II promoter - SubClassOf('mRNA transcription from RNA polymerase II promoter' 'mRNA transcription') - SubClassOf('mRNA transcription from RNA polymerase II promoter' 'transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#CHEBI_23367 label: molecular entity - SubClassOf('molecular entity' 'object') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_5752 label: Heterolobosea - SubClassOf('Heterolobosea' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000820 label: negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation' ) - SubClassOf('negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation' 'biological_process') - SubClassOf('negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation' 'negative regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0019082 label: viral protein processing - SubClassOf('viral protein processing' 'protein processing') - SubClassOf('viral protein processing' ObjectSomeValueFrom('part_of' 'viral genome expression')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0019057 label: modulation by virus of host translation - SubClassOf('modulation by virus of host translation' 'modulation by symbiont of host translation') - SubClassOf('modulation by virus of host translation' 'modulation by virus of host gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043827 label: tRNA (adenine-57, 58-N(1)-) methyltransferase activity - SubClassOf('tRNA (adenine-57, 58-N(1)-) methyltransferase activity' 'tRNA (adenine-N1-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001009 label: transcription from RNA polymerase III type 2 promoter - SubClassOf('transcription from RNA polymerase III type 2 promoter' 'transcription from RNA polymerase III promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044316 label: cone cell pedicle - SubClassOf('cone cell pedicle' 'axon terminus') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097464 label: thorny excrescence - SubClassOf('thorny excrescence' 'dendritic spine') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000476 label: maturation of 4.5S rRNA - SubClassOf('maturation of 4.5S rRNA' 'rRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000056 label: MuscleTissueCell - SubClassOf('MuscleTissueCell' 'cell') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000284 label: TricuspidValve - SubClassOf('TricuspidValve' 'Valves') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006616 label: SRP-dependent cotranslational protein targeting to membrane, translocation - SubClassOf('SRP-dependent cotranslational protein targeting to membrane, translocation' 'biological_process') - SubClassOf('SRP-dependent cotranslational protein targeting to membrane, translocation' ObjectSomeValueFrom('part_of' 'SRP-dependent cotranslational protein targeting to membrane')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0090475 label: lys-lys specific dibasic protein processing - SubClassOf('lys-lys specific dibasic protein processing' 'dibasic protein processing') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_9526 label: Catarrhini - SubClassOf('Catarrhini' 'Simiiformes') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035950 label: regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000092 label: ct_gene - SubClassOf('ct_gene' 'plastid_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_2001207 label: regulation of transcription elongation from RNA polymerase I promoter - SubClassOf('regulation of transcription elongation from RNA polymerase I promoter' 'regulation of transcription from RNA polymerase I promoter') - SubClassOf('regulation of transcription elongation from RNA polymerase I promoter' ObjectSomeValueFrom('regulates' 'transcription elongation from RNA polymerase I promoter')) - EquivalentClasses('regulation of transcription elongation from RNA polymerase I promoter' ObjectSomeValueFrom('regulates' 'transcription elongation from RNA polymerase I promoter') ) - SubClassOf('regulation of transcription elongation from RNA polymerase I promoter' 'regulation of DNA-dependent transcription, elongation') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000282 label: MitralValve - SubClassOf('MitralValve' 'Valves') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044644 label: envenomation resulting in negative regulation of complement activation, alternative pathway in other organism - SubClassOf('envenomation resulting in negative regulation of complement activation, alternative pathway in other organism' 'envenomation resulting in modulation of complement activation, alternative pathway in other organism') - SubClassOf('envenomation resulting in negative regulation of complement activation, alternative pathway in other organism' ObjectSomeValueFrom('has_part' 'negative regulation of complement activation, alternative pathway in other organism')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000395 label: mRNA 5'-splice site recognition - SubClassOf('mRNA 5'-splice site recognition' ObjectSomeValueFrom('part_of' 'mRNA cis splicing, via spliceosome')) - SubClassOf('mRNA 5'-splice site recognition' 'mRNA splice site selection') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070038 label: rRNA (pseudouridine-N3-)-methyltransferase activity - SubClassOf('rRNA (pseudouridine-N3-)-methyltransferase activity' 'rRNA (pseudouridine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090472 label: dibasic protein processing - SubClassOf('dibasic protein processing' 'protein processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070613 label: regulation of protein processing - SubClassOf('regulation of protein processing' 'regulation of gene expression') - EquivalentClasses('regulation of protein processing' ObjectSomeValueFrom('regulates' 'protein processing') ) - SubClassOf('regulation of protein processing' ObjectSomeValueFrom('regulates' 'protein processing')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000103 label: NerveTissue - SubClassOf('NerveTissue' 'AdultTissue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000969 label: tRNA exon ligation utilizing ATP as source of linkage phosphate - SubClassOf('tRNA exon ligation utilizing ATP as source of linkage phosphate' 'tRNA exon ligation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000901 label: translation repressor activity, non-nucleic acid binding - SubClassOf('translation repressor activity, non-nucleic acid binding' 'translation factor activity, non-nucleic acid binding') - SubClassOf('translation repressor activity, non-nucleic acid binding' 'translation repressor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045990 label: carbon catabolite regulation of transcription - SubClassOf('carbon catabolite regulation of transcription' 'regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#MOD_00448 label: N-acetylaminoglucosylated residue - SubClassOf('N-acetylaminoglucosylated residue' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060969 label: negative regulation of gene silencing - SubClassOf('negative regulation of gene silencing' ObjectSomeValueFrom('negatively_regulates' 'gene silencing')) - EquivalentClasses('negative regulation of gene silencing' ObjectSomeValueFrom('negatively_regulates' 'gene silencing') ) - SubClassOf('negative regulation of gene silencing' 'regulation of gene silencing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000353 label: MaleReproductiveSystem - SubClassOf('MaleReproductiveSystem' 'ReproductiveOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_1902097 label: positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium - SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium' 'positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium' ) - SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001028 label: RNA polymerase III type 2 promoter TFIIIB-type transcription factor activity - SubClassOf('RNA polymerase III type 2 promoter TFIIIB-type transcription factor activity' 'TFIIIB-type transcription factor activity') - SubClassOf('RNA polymerase III type 2 promoter TFIIIB-type transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III type 2 promoter transcriptional preinitiation complex assembly')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001210 label: metal ion regulated sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription - SubClassOf('metal ion regulated sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' ObjectSomeValueFrom('part_of' 'negative regulation of transcription, DNA-dependent')) - SubClassOf('metal ion regulated sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' 'metal ion regulated sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000115 label: MiRNABinding - SubClassOf('MiRNABinding' ObjectSomeValueFrom('hasValidation' 'ExperimentalValidation')) - SubClassOf('MiRNABinding' 'biological_process') - SubClassOf('MiRNABinding' ObjectSomeValueFrom('involvedInEvent' 'processual_entity')) - SubClassOf('MiRNABinding' ObjectSomeValueFrom('hasMiRNA' 'miRNA')) - SubClassOf('MiRNABinding' ObjectSomeValueFrom('hasTarget' 'gene')) - SubClassOf('MiRNABinding' ObjectSomeValueFrom('hasPrediction' 'gene')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0002103 label: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) - SubClassOf('endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)' 'endonucleolytic cleavage involved in rRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900462 label: negative regulation of pseudohyphal growth by negative regulation of transcription from RNA polymerase II promoter - SubClassOf('negative regulation of pseudohyphal growth by negative regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of pseudohyphal growth by negative regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('negative regulation of pseudohyphal growth by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0003747 label: translation release factor activity - SubClassOf('translation release factor activity' 'translation termination factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090236 label: regulation of transcription from RNA polymerase II promoter involved in somitogenesis - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in somitogenesis' 'biological_process') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in somitogenesis' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in somitogenesis' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000244 label: assembly of spliceosomal tri-snRNP - SubClassOf('assembly of spliceosomal tri-snRNP' 'biological_process') - SubClassOf('assembly of spliceosomal tri-snRNP' ObjectSomeValueFrom('part_of' 'spliceosomal snRNP assembly')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000288 label: IliacVein - SubClassOf('IliacVein' 'Vein') --- Class Changed: http://purl.org/obo/owl/omit#GO_0009371 label: positive regulation of transcription by pheromones - SubClassOf('positive regulation of transcription by pheromones' 'positive regulation of transcription, DNA-dependent') - SubClassOf('positive regulation of transcription by pheromones' 'regulation of transcription by pheromones') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000767 label: positive regulation of cytoplasmic translation - SubClassOf('positive regulation of cytoplasmic translation' 'regulation of cytoplasmic translation') - EquivalentClasses('positive regulation of cytoplasmic translation' ObjectSomeValueFrom('positively_regulates' 'cytoplasmic translation') ) - SubClassOf('positive regulation of cytoplasmic translation' 'positive regulation of translation') - SubClassOf('positive regulation of cytoplasmic translation' ObjectSomeValueFrom('positively_regulates' 'cytoplasmic translation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000384 label: first spliceosomal transesterification activity - SubClassOf('first spliceosomal transesterification activity' 'biological_process') - SubClassOf('first spliceosomal transesterification activity' ObjectSomeValueFrom('part_of' 'RNA splicing, via transesterification reactions')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000253 label: ReproductiveOrgan - SubClassOf('ReproductiveOrgan' 'AnatomicFeature') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000121 label: TumorMetastasis - SubClassOf('TumorMetastasis' 'PathologicalEvent') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900401 label: regulation of meiosis by regulation of transcription from RNA polymerase II promoter - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of meiosis by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of meiosis by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of meiosis by regulation of transcription from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000291 label: RenalVeins - SubClassOf('RenalVeins' 'Vein') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002938 label: tRNA guanine ribose methylation - SubClassOf('tRNA guanine ribose methylation' 'tRNA nucleoside ribose methylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002109 label: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) - SubClassOf('maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)' 'maturation of SSU-rRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060212 label: negative regulation of nuclear-transcribed mRNA poly(A) tail shortening - SubClassOf('negative regulation of nuclear-transcribed mRNA poly(A) tail shortening' ObjectSomeValueFrom('negatively_regulates' 'nuclear-transcribed mRNA poly(A) tail shortening')) - SubClassOf('negative regulation of nuclear-transcribed mRNA poly(A) tail shortening' 'regulation of nuclear-transcribed mRNA poly(A) tail shortening') - EquivalentClasses('negative regulation of nuclear-transcribed mRNA poly(A) tail shortening' ObjectSomeValueFrom('negatively_regulates' 'nuclear-transcribed mRNA poly(A) tail shortening') ) - SubClassOf('negative regulation of nuclear-transcribed mRNA poly(A) tail shortening' 'negative regulation of mRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000270 label: SuperiorMesentericArtery - SubClassOf('SuperiorMesentericArtery' 'Artery') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000125 label: EndocrineDisease - SubClassOf('EndocrineDisease' 'Disease') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901313 label: positive regulation of gene expression involved in extracellular matrix organization - SubClassOf('positive regulation of gene expression involved in extracellular matrix organization' 'positive regulation of gene expression') - EquivalentClasses('positive regulation of gene expression involved in extracellular matrix organization' ObjectSomeValueFrom('positively_regulates' 'gene expression involved in extracellular matrix organization') ) - SubClassOf('positive regulation of gene expression involved in extracellular matrix organization' 'regulation of gene expression involved in extracellular matrix organization') - SubClassOf('positive regulation of gene expression involved in extracellular matrix organization' ObjectSomeValueFrom('positively_regulates' 'gene expression involved in extracellular matrix organization')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000118 label: SignOrSymptom - SubClassOf('SignOrSymptom' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034395 label: regulation of transcription from RNA polymerase II promoter in response to iron - SubClassOf('regulation of transcription from RNA polymerase II promoter in response to iron' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032023 label: trypsinogen activation - SubClassOf('trypsinogen activation' 'zymogen activation') --- Class Changed: http://purl.org/obo/owl/omit#SO_1001261 label: recoded_mRNA - SubClassOf('recoded_mRNA' 'mRNA') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000099 label: EmbryonicTissue - SubClassOf('EmbryonicTissue' 'Tissue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044073 label: modulation by symbiont of host translation - SubClassOf('modulation by symbiont of host translation' 'regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044636 label: envenomation resulting in modulation of complement activation, classical pathway in other organism - SubClassOf('envenomation resulting in modulation of complement activation, classical pathway in other organism' 'biological_process') - SubClassOf('envenomation resulting in modulation of complement activation, classical pathway in other organism' ObjectSomeValueFrom('has_part' 'modulation of complement activation, classical pathway in other organism')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0007329 label: positive regulation of transcription from RNA polymerase II promoter by pheromones - SubClassOf('positive regulation of transcription from RNA polymerase II promoter by pheromones' 'positive regulation of transcription by pheromones') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter by pheromones' 'regulation of transcription from RNA polymerase II promoter by pheromones') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter by pheromones' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0009020 label: tRNA (guanosine-2'-O-)-methyltransferase activity - SubClassOf('tRNA (guanosine-2'-O-)-methyltransferase activity' 'tRNA (guanine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0072097 label: negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway - SubClassOf('negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway' 'biological_process') - SubClassOf('negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway' 'BMP signaling pathway') - EquivalentClasses('BMP signaling pathway' 'negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0006426 label: glycyl-tRNA aminoacylation - EquivalentClasses('glycyl-tRNA aminoacylation' 'mitochondrial glycyl-tRNA aminoacylation' ) - SubClassOf('glycyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001200 label: metal ion regulated sequence-specific DNA binding RNA polymerase II transcription factor activity - SubClassOf('metal ion regulated sequence-specific DNA binding RNA polymerase II transcription factor activity' 'sequence-specific DNA binding RNA polymerase II transcription factor activity') - SubClassOf('metal ion regulated sequence-specific DNA binding RNA polymerase II transcription factor activity' 'metal ion regulated sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070930 label: trans-translation-dependent protein tagging - SubClassOf('trans-translation-dependent protein tagging' ObjectSomeValueFrom('has_part' 'trans-translation')) - SubClassOf('trans-translation-dependent protein tagging' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071037 label: nuclear polyadenylation-dependent snRNA catabolic process - SubClassOf('nuclear polyadenylation-dependent snRNA catabolic process' 'nuclear polyadenylation-dependent ncRNA catabolic process') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000098 label: AdultTissue - SubClassOf('AdultTissue' 'Tissue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010426 label: DNA methylation on cytosine within a CHH sequence - SubClassOf('DNA methylation on cytosine within a CHH sequence' 'DNA methylation on cytosine') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901581 label: negative regulation of telomeric RNA transcription from RNA pol II promoter - SubClassOf('negative regulation of telomeric RNA transcription from RNA pol II promoter' 'negative regulation of transcription from RNA polymerase II promoter') - SubClassOf('negative regulation of telomeric RNA transcription from RNA pol II promoter' 'regulation of telomeric RNA transcription from RNA pol II promoter') - SubClassOf('negative regulation of telomeric RNA transcription from RNA pol II promoter' ObjectSomeValueFrom('negatively_regulates' 'telomeric RNA transcription from RNA pol II promoter')) - EquivalentClasses('negative regulation of telomeric RNA transcription from RNA pol II promoter' ObjectSomeValueFrom('negatively_regulates' 'telomeric RNA transcription from RNA pol II promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0019988 label: charged-tRNA amino acid modification - SubClassOf('charged-tRNA amino acid modification' 'tRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039559 label: suppression by virus of host IRF7 activity by positive regulation of IRF7 catabolic process - SubClassOf('suppression by virus of host IRF7 activity by positive regulation of IRF7 catabolic process' 'suppression by virus of host IRF7 activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061186 label: negative regulation of chromatin silencing at silent mating-type cassette - EquivalentClasses('negative regulation of chromatin silencing at silent mating-type cassette' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing at silent mating-type cassette') ) - SubClassOf('negative regulation of chromatin silencing at silent mating-type cassette' 'negative regulation of chromatin silencing') - SubClassOf('negative regulation of chromatin silencing at silent mating-type cassette' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing at silent mating-type cassette')) - SubClassOf('negative regulation of chromatin silencing at silent mating-type cassette' 'regulation of chromatin silencing at silent mating-type cassette') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033463 label: GGA codon-amino acid adaptor activity - SubClassOf('GGA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_1990037 label: Lewy body core - SubClassOf('Lewy body core' ObjectSomeValueFrom('part_of' 'Lewy body')) - SubClassOf('Lewy body core' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006400 label: tRNA modification - SubClassOf('tRNA modification' 'tRNA processing') - EquivalentClasses('tRNA modification' 'mitochondrial tRNA modification' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0045183 label: translation factor activity, non-nucleic acid binding - SubClassOf('translation factor activity, non-nucleic acid binding' 'translation regulator activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901536 label: negative regulation of DNA demethylation - SubClassOf('negative regulation of DNA demethylation' ObjectSomeValueFrom('negatively_regulates' 'DNA demethylation')) - EquivalentClasses('negative regulation of DNA demethylation' ObjectSomeValueFrom('negatively_regulates' 'DNA demethylation') ) - SubClassOf('negative regulation of DNA demethylation' 'regulation of DNA demethylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034247 label: snoRNA splicing - SubClassOf('snoRNA splicing' 'snoRNA processing') - SubClassOf('snoRNA splicing' 'RNA splicing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097167 label: circadian regulation of translation - SubClassOf('circadian regulation of translation' 'regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#MOD_00394 label: acetylated residue - SubClassOf('acetylated residue' 'post-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000358 label: Vagina - SubClassOf('Vagina' 'FemaleReproductiveSystem') --- Class Changed: http://purl.org/obo/owl/omit#GO_0019080 label: viral genome expression - SubClassOf('viral genome expression' 'gene expression') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001638 label: piRNA_gene - SubClassOf('piRNA_gene' 'ncRNA_gene') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000330 label: Thymus - SubClassOf('Thymus' 'LymphaticOrgan') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000140 label: Tumor - SubClassOf('Tumor' 'Neoplasia') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_38254 label: Glaucocystophyceae - SubClassOf('Glaucocystophyceae' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007228 label: positive regulation of hh target transcription factor activity - SubClassOf('positive regulation of hh target transcription factor activity' 'positive regulation of sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000141 label: CardiovascularDisease - SubClassOf('CardiovascularDisease' 'OrganSystemDisease') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030698 label: 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity - SubClassOf('5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity' 'tRNA (m5U54) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061406 label: positive regulation of transcription from RNA polymerase II promoter in response to glucose starvation - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to glucose starvation' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900423 label: positive regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000168 label: Hemangioendothelioma - SubClassOf('Hemangioendothelioma' 'IntermediateGradeNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000482 label: maturation of 5S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - SubClassOf('maturation of 5S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'maturation of 5S rRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006370 label: 7-methylguanosine mRNA capping - SubClassOf('7-methylguanosine mRNA capping' '7-methylguanosine RNA capping') - SubClassOf('7-methylguanosine mRNA capping' 'mRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090474 label: arg-arg specific dibasic protein processing - SubClassOf('arg-arg specific dibasic protein processing' 'dibasic protein processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060145 label: viral gene silencing in virus induced gene silencing - SubClassOf('viral gene silencing in virus induced gene silencing' 'posttranscriptional gene silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001182 label: promoter clearance from RNA polymerase I promoter - SubClassOf('promoter clearance from RNA polymerase I promoter' 'promoter clearance during DNA-dependent transcription') - SubClassOf('promoter clearance from RNA polymerase I promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000208 label: LobularCarcinoma - SubClassOf('LobularCarcinoma' 'Carcinoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033457 label: GAU codon-amino acid adaptor activity - SubClassOf('GAU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002128 label: tRNA nucleoside ribose methylation - SubClassOf('tRNA nucleoside ribose methylation' 'tRNA methylation') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000797 label: natural_transposable_element - SubClassOf('natural_transposable_element' 'transposable_element') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006437 label: tyrosyl-tRNA aminoacylation - EquivalentClasses('tyrosyl-tRNA aminoacylation' 'mitochondrial tyrosyl-tRNA aminoacylation' ) - SubClassOf('tyrosyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- Class Changed: http://purl.org/obo/owl/omit#snap_ThreeDimensionalRegion label: three_dimensional_region - DisjointClasses('three_dimensional_region' 'zero_dimensional_region') - DisjointClasses('one_dimensional_region' 'three_dimensional_region') - SubClassOf('three_dimensional_region' 'spatial_region') - DisjointClasses('three_dimensional_region' 'two_dimensional_region') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000176 label: EssentialThrombocytosis - SubClassOf('EssentialThrombocytosis' 'ChronicMyeloproliferativeDisorders') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044303 label: axon collateral - SubClassOf('axon collateral' 'axon part') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000274 label: DescendingAorta - SubClassOf('DescendingAorta' 'Aorta') --- Class Changed: http://purl.org/obo/owl/omit#snap_GenericallyDependentContinuant label: generically_dependent_continuant - DisjointClasses('generically_dependent_continuant' 'specifically_dependent_continuant') - SubClassOf('generically_dependent_continuant' 'dependent_continuant') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000061 label: Thrombocyte - SubClassOf('Thrombocyte' 'ConnectiveTissueCell') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035968 label: regulation of sterol import by regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of sterol import by regulation of transcription from RNA polymerase II promoter' 'regulation of lipid transport by regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of sterol import by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0070869 label: heterochromatin assembly involved in chromatin silencing - EquivalentClasses('heterochromatin assembly involved in chromatin silencing' ObjectSomeValueFrom('part_of' 'chromatin silencing') ) - SubClassOf('heterochromatin assembly involved in chromatin silencing' 'heterochromatin organization involved in chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071164 label: RNA trimethylguanosine synthase activity - SubClassOf('RNA trimethylguanosine synthase activity' ObjectSomeValueFrom('part_of' '7-methylguanosine cap hypermethylation')) - SubClassOf('RNA trimethylguanosine synthase activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061216 label: regulation of transcription from RNA polymerase II promoter involved in mesonephros development - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in mesonephros development' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in mesonephros development' 'biological_process') - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in mesonephros development' 'regulation of transcription from RNA polymerase II promoter involved in kidney development') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000251 label: MusculoskeletalOrgan - SubClassOf('MusculoskeletalOrgan' 'AnatomicFeature') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042715 label: dosage compensation complex assembly involved in dosage compensation by hypoactivation of X chromosome - EquivalentClasses('dosage compensation complex assembly involved in dosage compensation by hypoactivation of X chromosome' ObjectIntersectionOf('dosage compensation complex assembly' ObjectSomeValueFrom('part_of' 'dosage compensation by hypoactivation of X chromosome')) ) - SubClassOf('dosage compensation complex assembly involved in dosage compensation by hypoactivation of X chromosome' ObjectSomeValueFrom('part_of' 'dosage compensation by hypoactivation of X chromosome')) - SubClassOf('dosage compensation complex assembly involved in dosage compensation by hypoactivation of X chromosome' 'dosage compensation complex assembly') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034401 label: regulation of transcription by chromatin organization - SubClassOf('regulation of transcription by chromatin organization' 'regulation of transcription, DNA-dependent') - EquivalentClasses('regulation of transcription by chromatin organization' ObjectSomeValueFrom('part_of' 'transcription, DNA-dependent') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0035516 label: oxidative DNA demethylase activity - SubClassOf('oxidative DNA demethylase activity' 'DNA demethylase activity') - SubClassOf('oxidative DNA demethylase activity' ObjectSomeValueFrom('part_of' 'oxidative DNA demethylation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001024 label: transcription initiation from RNA polymerase III type 3 promoter - SubClassOf('transcription initiation from RNA polymerase III type 3 promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III type 3 promoter')) - SubClassOf('transcription initiation from RNA polymerase III type 3 promoter' 'transcription initiation from RNA polymerase III promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036206 label: regulation of histone gene expression - SubClassOf('regulation of histone gene expression' 'regulation of gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900473 label: negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') - SubClassOf('negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000888 label: maternally_imprinted_gene - SubClassOf('maternally_imprinted_gene' 'epigenetically_modified_gene') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001412 label: topologically_defined_region - SubClassOf('topologically_defined_region' 'region') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000693 label: gene_with_recoded_mRNA - SubClassOf('gene_with_recoded_mRNA' 'protein_coding_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901838 label: positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter - EquivalentClasses('positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' ObjectSomeValueFrom('positively_regulates' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter') ) - SubClassOf('positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' 'positive regulation of transcription from RNA polymerase I promoter') - SubClassOf('positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' ObjectSomeValueFrom('positively_regulates' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter')) - SubClassOf('positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' 'regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042793 label: transcription from plastid promoter - SubClassOf('transcription from plastid promoter' 'transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000254 label: RespiratoryOrgan - SubClassOf('RespiratoryOrgan' 'AnatomicFeature') --- Class Changed: http://purl.org/obo/owl/omit#GO_0004808 label: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity - SubClassOf('tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity' 'tRNA methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000459 label: exonucleolytic trimming involved in rRNA processing - SubClassOf('exonucleolytic trimming involved in rRNA processing' 'cleavage involved in rRNA processing') - EquivalentClasses('exonucleolytic trimming involved in rRNA processing' ObjectSomeValueFrom('part_of' 'rRNA processing') ) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000169 label: RNApol_I_promoter - SubClassOf('RNApol_I_promoter' 'RNA_polymerase_promoter') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000203 label: Carcinoma - SubClassOf('Carcinoma' 'MalignantNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001022 label: transcription initiation from RNA polymerase III type 1 promoter - SubClassOf('transcription initiation from RNA polymerase III type 1 promoter' 'transcription initiation from RNA polymerase III promoter') - SubClassOf('transcription initiation from RNA polymerase III type 1 promoter' ObjectSomeValueFrom('part_of' '5S class rRNA transcription from RNA polymerase III type 1 promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0097236 label: positive regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation' 'regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010756 label: positive regulation of plasminogen activation - SubClassOf('positive regulation of plasminogen activation' 'positive regulation of protein processing') - SubClassOf('positive regulation of plasminogen activation' ObjectSomeValueFrom('positively_regulates' 'plasminogen activation')) - EquivalentClasses('positive regulation of plasminogen activation' ObjectSomeValueFrom('positively_regulates' 'plasminogen activation') ) - SubClassOf('positive regulation of plasminogen activation' 'regulation of plasminogen activation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0050821 label: protein stabilization - SubClassOf('protein stabilization' 'regulation of protein stability') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060968 label: regulation of gene silencing - EquivalentClasses('regulation of gene silencing' ObjectSomeValueFrom('regulates' 'gene silencing') ) - SubClassOf('regulation of gene silencing' ObjectSomeValueFrom('regulates' 'gene silencing')) - SubClassOf('regulation of gene silencing' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001175 label: transcriptional start site selection at RNA polymerase III promoter - SubClassOf('transcriptional start site selection at RNA polymerase III promoter' 'DNA-dependent transcriptional start site selection') - SubClassOf('transcriptional start site selection at RNA polymerase III promoter' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase III promoter')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000376 label: Ureter - SubClassOf('Ureter' 'UrinaryOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016436 label: rRNA (uridine) methyltransferase activity - SubClassOf('rRNA (uridine) methyltransferase activity' 'rRNA methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000971 label: tRNA exon ligation utilizing 2',3' cyclic phosphate of 5'-exon as source of linkage phosphate - SubClassOf('tRNA exon ligation utilizing 2',3' cyclic phosphate of 5'-exon as source of linkage phosphate' 'tRNA exon ligation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031639 label: plasminogen activation - SubClassOf('plasminogen activation' 'zymogen activation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090294 label: nitrogen catabolite activation of transcription - SubClassOf('nitrogen catabolite activation of transcription' 'nitrogen catabolite regulation of transcription') - SubClassOf('nitrogen catabolite activation of transcription' 'positive regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001152 label: RNA polymerase III type 1 promoter sequence-specific DNA binding TFIIIC recruiting transcription factor activity - SubClassOf('RNA polymerase III type 1 promoter sequence-specific DNA binding TFIIIC recruiting transcription factor activity' 'sequence-specific DNA binding transcription factor recruiting transcription factor activity') - SubClassOf('RNA polymerase III type 1 promoter sequence-specific DNA binding TFIIIC recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III type 1 promoter transcriptional preinitiation complex assembly')) - SubClassOf('RNA polymerase III type 1 promoter sequence-specific DNA binding TFIIIC recruiting transcription factor activity' 'RNA polymerase III transcription factor recruiting transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000120 label: TumorCellProliferation - SubClassOf('TumorCellProliferation' 'PathologicalEvent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007071 label: negative regulation of transcription from RNA polymerase III promoter during mitosis - SubClassOf('negative regulation of transcription from RNA polymerase III promoter during mitosis' 'regulation of transcription from RNA polymerase III promoter, mitotic') - SubClassOf('negative regulation of transcription from RNA polymerase III promoter during mitosis' 'negative regulation of transcription from RNA polymerase III promoter') - SubClassOf('negative regulation of transcription from RNA polymerase III promoter during mitosis' 'negative regulation of transcription during mitosis') --- Class Changed: http://purl.org/obo/owl/omit#GO_0048024 label: regulation of mRNA splicing, via spliceosome - EquivalentClasses('regulation of mRNA splicing, via spliceosome' ObjectSomeValueFrom('regulates' 'mRNA splicing, via spliceosome') ) - SubClassOf('regulation of mRNA splicing, via spliceosome' 'regulation of RNA splicing') - SubClassOf('regulation of mRNA splicing, via spliceosome' 'regulation of mRNA processing') - SubClassOf('regulation of mRNA splicing, via spliceosome' ObjectSomeValueFrom('regulates' 'mRNA splicing, via spliceosome')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0034471 label: ncRNA 5'-end processing - SubClassOf('ncRNA 5'-end processing' 'RNA 5'-end processing') - SubClassOf('ncRNA 5'-end processing' 'ncRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000029 label: Temperature - SubClassOf('Temperature' 'EnvironmentalVariable') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070154 label: mitochondrial lysyl-tRNA aminoacylation - SubClassOf('mitochondrial lysyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') - SubClassOf('mitochondrial lysyl-tRNA aminoacylation' 'lysyl-tRNA aminoacylation') - EquivalentClasses('lysyl-tRNA aminoacylation' 'mitochondrial lysyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000380 label: alternative mRNA splicing, via spliceosome - SubClassOf('alternative mRNA splicing, via spliceosome' 'mRNA splicing, via spliceosome') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090020 label: regulation of transcription involved in posterior neural plate formation - SubClassOf('regulation of transcription involved in posterior neural plate formation' 'regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of transcription involved in posterior neural plate formation' 'biological_process') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in posterior neural plate formation' ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000026 label: EnvironmentalVariable - SubClassOf('EnvironmentalVariable' 'quality') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_7712 label: Tunicata - SubClassOf('Tunicata' 'Chordata') --- Class Changed: http://purl.org/obo/owl/omit#span_SpatiotemporalInstant label: spatiotemporal_instant - SubClassOf('spatiotemporal_instant' 'connected_spatiotemporal_region') - DisjointClasses('spatiotemporal_instant' 'spatiotemporal_interval') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016246 label: RNA interference - SubClassOf('RNA interference' 'posttranscriptional gene silencing by RNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043619 label: regulation of transcription from RNA polymerase II promoter in response to oxidative stress - SubClassOf('regulation of transcription from RNA polymerase II promoter in response to oxidative stress' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901308 label: regulation of sterol regulatory element binding protein cleavage - SubClassOf('regulation of sterol regulatory element binding protein cleavage' 'regulation of SREBP signaling pathway') - SubClassOf('regulation of sterol regulatory element binding protein cleavage' 'regulation of protein processing') - EquivalentClasses('regulation of sterol regulatory element binding protein cleavage' ObjectSomeValueFrom('regulates' 'sterol regulatory element binding protein cleavage') ) - SubClassOf('regulation of sterol regulatory element binding protein cleavage' ObjectSomeValueFrom('regulates' 'sterol regulatory element binding protein cleavage')) --- Class Changed: http://purl.org/obo/owl/omit#GO_2001165 label: positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues - SubClassOf('positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' ObjectSomeValueFrom('positively_regulates' 'phosphorylation of RNA polymerase II C-terminal domain serine 2 residues')) - SubClassOf('positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' 'regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues') - SubClassOf('positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' 'positive regulation of phosphorylation of RNA polymerase II C-terminal domain') - EquivalentClasses('positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' ObjectSomeValueFrom('positively_regulates' 'phosphorylation of RNA polymerase II C-terminal domain serine 2 residues') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0032775 label: DNA methylation on adenine - SubClassOf('DNA methylation on adenine' 'DNA methylation') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000647 label: miRNA_primary_transcript - SubClassOf('miRNA_primary_transcript' 'nc_primary_transcript') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071424 label: rRNA (cytosine-N4-)-methyltransferase activity - SubClassOf('rRNA (cytosine-N4-)-methyltransferase activity' 'rRNA (cytosine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901619 label: tRNA methylation in response to nitrogen starvation - EquivalentClasses('tRNA methylation in response to nitrogen starvation' ObjectSomeValueFrom('results_in' 'tRNA methylation') ) - SubClassOf('tRNA methylation in response to nitrogen starvation' 'tRNA methylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0008380 label: RNA splicing - SubClassOf('RNA splicing' 'RNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0052916 label: 23S rRNA (guanine(1835)-N(2))-methyltransferase activity - SubClassOf('23S rRNA (guanine(1835)-N(2))-methyltransferase activity' 'rRNA (guanine-N2-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033404 label: UUG codon-amino acid adaptor activity - SubClassOf('UUG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001130 label: sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity - SubClassOf('sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity' 'sequence-specific DNA binding transcription factor activity') - SubClassOf('sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from bacterial-type RNA polymerase promoter')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000157 label: PleuralSolitaryFibrousTumor - SubClassOf('PleuralSolitaryFibrousTumor' 'ConnectiveOrigin') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006386 label: termination of RNA polymerase III transcription - SubClassOf('termination of RNA polymerase III transcription' 'DNA-dependent transcription, termination') - SubClassOf('termination of RNA polymerase III transcription' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033412 label: UAG codon-amino acid adaptor activity - SubClassOf('UAG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039550 label: suppression by virus of host IRF3 activity by inhibition of DNA binding - SubClassOf('suppression by virus of host IRF3 activity by inhibition of DNA binding' 'suppression by virus of host IRF3 activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001267 label: snoRNA_gene - SubClassOf('snoRNA_gene' 'ncRNA_gene') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_2830 label: Haptophyceae - SubClassOf('Haptophyceae' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000818 label: wild_type_rescue_gene - SubClassOf('wild_type_rescue_gene' 'rescue_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901589 label: axon microtubule bundle - EquivalentClasses('axon microtubule bundle' ObjectSomeValueFrom('part_of' 'axon') ) - SubClassOf('axon microtubule bundle' 'axon part') - SubClassOf('axon microtubule bundle' ObjectSomeValueFrom('part_of' 'axon')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0097222 label: mitochondrial mRNA polyadenylation - SubClassOf('mitochondrial mRNA polyadenylation' 'mRNA polyadenylation') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000618 label: RNApol_III_promoter_type_2 - SubClassOf('RNApol_III_promoter_type_2' 'RNApol_III_promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000142 label: regulation of DNA-dependent transcription, initiation - SubClassOf('regulation of DNA-dependent transcription, initiation' 'regulation of transcription, DNA-dependent') - EquivalentClasses('regulation of DNA-dependent transcription, initiation' ObjectSomeValueFrom('regulates' 'DNA-dependent transcription, initiation') ) - SubClassOf('regulation of DNA-dependent transcription, initiation' ObjectSomeValueFrom('regulates' 'DNA-dependent transcription, initiation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033464 label: GGG codon-amino acid adaptor activity - SubClassOf('GGG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000348 label: SympatheticNervousSystem - SubClassOf('SympatheticNervousSystem' 'AutonomicNervousSystem') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001168 label: RNA polymerase I upstream control element sequence-specific DNA binding transcription factor activity - SubClassOf('RNA polymerase I upstream control element sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding RNA polymerase I transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043634 label: polyadenylation-dependent ncRNA catabolic process - SubClassOf('polyadenylation-dependent ncRNA catabolic process' 'biological_process') - SubClassOf('polyadenylation-dependent ncRNA catabolic process' ObjectSomeValueFrom('has_part' 'ncRNA polyadenylation')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000193 label: FollicularLymphoma - SubClassOf('FollicularLymphoma' 'MatureBCellNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031048 label: chromatin silencing by small RNA - SubClassOf('chromatin silencing by small RNA' 'gene silencing by RNA') - SubClassOf('chromatin silencing by small RNA' 'chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_1902360 label: conversion of ds siRNA to ss siRNA involved in chromatin silencing by small RNA - SubClassOf('conversion of ds siRNA to ss siRNA involved in chromatin silencing by small RNA' ObjectSomeValueFrom('part_of' 'chromatin silencing by small RNA')) - EquivalentClasses('conversion of ds siRNA to ss siRNA involved in chromatin silencing by small RNA' ObjectIntersectionOf('conversion of ds siRNA to ss siRNA' ObjectSomeValueFrom('part_of' 'chromatin silencing by small RNA')) ) - SubClassOf('conversion of ds siRNA to ss siRNA involved in chromatin silencing by small RNA' 'conversion of ds siRNA to ss siRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010735 label: positive regulation of transcription via serum response element binding - SubClassOf('positive regulation of transcription via serum response element binding' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006414 label: translational elongation - EquivalentClasses('translational elongation' 'mitochondrial translational elongation' ) - SubClassOf('translational elongation' ObjectSomeValueFrom('part_of' 'translation')) - SubClassOf('translational elongation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070042 label: rRNA (uridine-N3-)-methyltransferase activity - SubClassOf('rRNA (uridine-N3-)-methyltransferase activity' 'rRNA (uridine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000690 label: gene_with_polycistronic_transcript - SubClassOf('gene_with_polycistronic_transcript' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000059 label: Erythrocyte - SubClassOf('Erythrocyte' 'ConnectiveTissueCell') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000698 label: gene_with_stop_codon_redefined_as_pyrrolysine - SubClassOf('gene_with_stop_codon_redefined_as_pyrrolysine' 'gene_with_stop_codon_read_through') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034244 label: negative regulation of transcription elongation from RNA polymerase II promoter - EquivalentClasses('negative regulation of transcription elongation from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription elongation from RNA polymerase II promoter') ) - SubClassOf('negative regulation of transcription elongation from RNA polymerase II promoter' 'regulation of transcription elongation from RNA polymerase II promoter') - SubClassOf('negative regulation of transcription elongation from RNA polymerase II promoter' 'negative regulation of DNA-dependent transcription, elongation') - SubClassOf('negative regulation of transcription elongation from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription elongation from RNA polymerase II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000030 label: HighPressure - SubClassOf('HighPressure' 'Pressure') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060735 label: regulation of eIF2 alpha phosphorylation by dsRNA - SubClassOf('regulation of eIF2 alpha phosphorylation by dsRNA' ObjectSomeValueFrom('regulates' 'regulation of translational initiation by eIF2 alpha phosphorylation')) - SubClassOf('regulation of eIF2 alpha phosphorylation by dsRNA' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0052907 label: 23S rRNA (adenine(1618)-N(6))-methyltransferase activity - SubClassOf('23S rRNA (adenine(1618)-N(6))-methyltransferase activity' 'rRNA (adenine-N6-)-methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046021 label: regulation of transcription from RNA polymerase II promoter, mitotic - SubClassOf('regulation of transcription from RNA polymerase II promoter, mitotic' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter, mitotic' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter, mitotic' 'regulation of transcription during mitosis') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097341 label: zymogen inhibition - SubClassOf('zymogen inhibition' 'negative regulation of protein processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001043 label: RNA polymerase III hybrid type promoter transcriptional preinitiation complex assembly - SubClassOf('RNA polymerase III hybrid type promoter transcriptional preinitiation complex assembly' 'RNA polymerase III transcriptional preinitiation complex assembly') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045872 label: positive regulation of rhodopsin gene expression - SubClassOf('positive regulation of rhodopsin gene expression' 'regulation of rhodopsin gene expression') - SubClassOf('positive regulation of rhodopsin gene expression' 'positive regulation of gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900094 label: regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry' 'regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006985 label: positive regulation of NF-kappaB transcription factor activity by ER overload response - EquivalentClasses('positive regulation of NF-kappaB transcription factor activity by ER overload response' ObjectSomeValueFrom('results_in' 'positive regulation of NF-kappaB transcription factor activity') ) - SubClassOf('positive regulation of NF-kappaB transcription factor activity by ER overload response' 'positive regulation of NF-kappaB transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_1990096 label: positive regulation of transcription from RNA polymerase II promoter in response to superoxide - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to superoxide' 'positive regulation of transcription from RNA polymerase II promoter in response to reactive oxygen species') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900145 label: regulation of nodal signaling pathway involved in determination of left/right asymmetry - SubClassOf('regulation of nodal signaling pathway involved in determination of left/right asymmetry' ObjectSomeValueFrom('regulates' 'nodal signaling pathway involved in determination of left/right asymmetry')) - EquivalentClasses('regulation of nodal signaling pathway involved in determination of left/right asymmetry' ObjectSomeValueFrom('regulates' 'nodal signaling pathway involved in determination of left/right asymmetry') ) - SubClassOf('regulation of nodal signaling pathway involved in determination of left/right asymmetry' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033459 label: GAA codon-amino acid adaptor activity - SubClassOf('GAA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0003256 label: regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation - EquivalentClasses('regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation' 'regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation' 'biological_process') - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation' 'regulation of transcription from RNA polymerase II promoter involved in heart development') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016426 label: tRNA (adenine) methyltransferase activity - SubClassOf('tRNA (adenine) methyltransferase activity' 'tRNA methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000929 label: edited_mRNA - SubClassOf('edited_mRNA' 'mRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061475 label: cytosolic valyl-tRNA aminoacylation - SubClassOf('cytosolic valyl-tRNA aminoacylation' 'valyl-tRNA aminoacylation') - SubClassOf('cytosolic valyl-tRNA aminoacylation' 'biological_process') - EquivalentClasses('valyl-tRNA aminoacylation' 'cytosolic valyl-tRNA aminoacylation' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0017150 label: tRNA dihydrouridine synthase activity - SubClassOf('tRNA dihydrouridine synthase activity' ObjectSomeValueFrom('part_of' 'tRNA dihydrouridine synthesis')) - SubClassOf('tRNA dihydrouridine synthase activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001201 label: metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity - SubClassOf('metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity' 'RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity') - SubClassOf('metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity' 'metal ion regulated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044029 label: hypomethylation of CpG island - SubClassOf('hypomethylation of CpG island' 'DNA hypomethylation') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001637 label: rRNA_gene - SubClassOf('rRNA_gene' 'ncRNA_gene') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_6157 label: Platyhelminthes - SubClassOf('Platyhelminthes' 'Bilateria') --- Class Changed: http://purl.org/obo/owl/omit#GO_0043196 label: varicosity - SubClassOf('varicosity' 'axon part') - SubClassOf('varicosity' ObjectSomeValueFrom('part_of' 'main axon')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0000348 label: mRNA branch site recognition - SubClassOf('mRNA branch site recognition' ObjectSomeValueFrom('part_of' 'spliceosomal complex assembly')) - SubClassOf('mRNA branch site recognition' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000366 label: intergenic mRNA trans splicing - SubClassOf('intergenic mRNA trans splicing' 'mRNA trans splicing, via spliceosome') - SubClassOf('intergenic mRNA trans splicing' 'alternative mRNA splicing, via spliceosome') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070132 label: regulation of mitochondrial translational initiation - SubClassOf('regulation of mitochondrial translational initiation' 'regulation of translational initiation') - SubClassOf('regulation of mitochondrial translational initiation' ObjectSomeValueFrom('regulates' 'mitochondrial translational initiation')) - EquivalentClasses('regulation of mitochondrial translational initiation' ObjectSomeValueFrom('regulates' 'mitochondrial translational initiation') ) - SubClassOf('regulation of mitochondrial translational initiation' 'regulation of mitochondrial translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033269 label: internode region of axon - SubClassOf('internode region of axon' ObjectSomeValueFrom('part_of' 'main axon')) - SubClassOf('internode region of axon' 'axon part') --- Class Changed: http://purl.org/obo/owl/omit#MOD_00031 label: L-selenocysteine residue - SubClassOf('L-selenocysteine residue' 'pre-translationally modified amino-acid residue') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001180 label: transcription initiation from RNA polymerase I promoter for nuclear large rRNA transcript - SubClassOf('transcription initiation from RNA polymerase I promoter for nuclear large rRNA transcript' ObjectSomeValueFrom('part_of' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter')) - SubClassOf('transcription initiation from RNA polymerase I promoter for nuclear large rRNA transcript' 'transcription initiation from RNA polymerase I promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001054 label: RNA polymerase I activity - SubClassOf('RNA polymerase I activity' 'biological_process') - EquivalentClasses('RNA polymerase I activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter') ) - SubClassOf('RNA polymerase I activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0021882 label: regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment' 'regulation of transcription involved in cell fate commitment') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030488 label: tRNA methylation - EquivalentClasses('tRNA methylation' 'mitochondrial tRNA methylation' ) - SubClassOf('tRNA methylation' 'tRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001679 label: transcription_regulatory_region - SubClassOf('transcription_regulatory_region' 'regulatory_region') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000101 label: transposable_element - SubClassOf('transposable_element' 'integrated_mobile_genetic_element') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000154 label: rRNA modification - SubClassOf('rRNA modification' 'rRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0080111 label: DNA demethylation - SubClassOf('DNA demethylation' 'regulation of gene expression, epigenetic') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000190 label: BurkittLymphoma - SubClassOf('BurkittLymphoma' 'MatureBCellNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010672 label: regulation of transcription from RNA polymerase II promoter during meiosis - SubClassOf('regulation of transcription from RNA polymerase II promoter during meiosis' 'regulation of transcription during meiosis') - SubClassOf('regulation of transcription from RNA polymerase II promoter during meiosis' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070037 label: rRNA (pseudouridine) methyltransferase activity - SubClassOf('rRNA (pseudouridine) methyltransferase activity' 'rRNA methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000100 label: ConnectiveTissue - SubClassOf('ConnectiveTissue' 'AdultTissue') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000001 label: region - SubClassOf('region' 'sequence_feature') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071891 label: N-terminal peptidyl-proline dimethylation involved in translation - EquivalentClasses('N-terminal peptidyl-proline dimethylation involved in translation' ObjectSomeValueFrom('part_of' 'translation') ) - SubClassOf('N-terminal peptidyl-proline dimethylation involved in translation' ObjectSomeValueFrom('part_of' 'translation')) - SubClassOf('N-terminal peptidyl-proline dimethylation involved in translation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000349 label: PeripheralNerves - SubClassOf('PeripheralNerves' 'SomaticNervousSystem') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071587 label: CAAX-box protein modification - SubClassOf('CAAX-box protein modification' ObjectSomeValueFrom('part_of' 'CAAX-box protein maturation')) - SubClassOf('CAAX-box protein modification' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0075524 label: ribosomal skipping - SubClassOf('ribosomal skipping' 'biological_process') - SubClassOf('ribosomal skipping' ObjectSomeValueFrom('part_of' 'viral translation')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033435 label: AUA codon-amino acid adaptor activity - SubClassOf('AUA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#span_ScatteredSpatiotemporalRegion label: scattered_spatiotemporal_region - SubClassOf('scattered_spatiotemporal_region' 'spatiotemporal_region') - DisjointClasses('connected_spatiotemporal_region' 'scattered_spatiotemporal_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0072366 label: regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter - EquivalentClasses('regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) - SubClassOf('regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_9263 label: Metatheria - SubClassOf('Metatheria' 'Theria') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070928 label: regulation of mRNA stability, ncRNA-mediated - SubClassOf('regulation of mRNA stability, ncRNA-mediated' 'regulation of mRNA stability') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_376912 label: Tarsiiformes - SubClassOf('Tarsiiformes' 'Haplorrhini') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001122 label: promoter clearance from bacterial-type RNA polymerase promoter - SubClassOf('promoter clearance from bacterial-type RNA polymerase promoter' 'promoter clearance during DNA-dependent transcription') - SubClassOf('promoter clearance from bacterial-type RNA polymerase promoter' ObjectSomeValueFrom('part_of' 'transcription from bacterial-type RNA polymerase promoter')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0044635 label: positive regulation of complement activation, alternative pathway in other organism - SubClassOf('positive regulation of complement activation, alternative pathway in other organism' 'positive regulation of complement activation, alternative pathway') - SubClassOf('positive regulation of complement activation, alternative pathway in other organism' 'modulation of complement activation, alternative pathway in other organism') --- Class Changed: http://purl.org/obo/owl/omit#GO_0080188 label: RNA-directed DNA methylation - SubClassOf('RNA-directed DNA methylation' 'DNA methylation') - SubClassOf('RNA-directed DNA methylation' 'gene silencing by RNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001153 label: RNA polymerase III transcription factor recruiting transcription factor activity - SubClassOf('RNA polymerase III transcription factor recruiting transcription factor activity' 'RNA polymerase III transcription factor binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010239 label: chloroplast mRNA processing - SubClassOf('chloroplast mRNA processing' 'mRNA processing') - SubClassOf('chloroplast mRNA processing' 'chloroplast RNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0003258 label: regulation of transcription from RNA polymerase II promoter involved in endocardial precursor cell differentiation - EquivalentClasses('regulation of transcription from RNA polymerase II promoter involved in endocardial precursor cell differentiation' 'regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in endocardial precursor cell differentiation' 'regulation of transcription from RNA polymerase II promoter involved in heart development') - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in endocardial precursor cell differentiation' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#SO_1001196 label: cryptogene - SubClassOf('cryptogene' 'maxicircle_gene') - SubClassOf('cryptogene' 'cryptic_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036261 label: 7-methylguanosine cap hypermethylation - SubClassOf('7-methylguanosine cap hypermethylation' 'RNA capping') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060815 label: regulation of translation involved in anterior/posterior axis specification - SubClassOf('regulation of translation involved in anterior/posterior axis specification' 'biological_process') - SubClassOf('regulation of translation involved in anterior/posterior axis specification' 'regulation of translation') - EquivalentClasses('regulation of translation' 'regulation of translation involved in anterior/posterior axis specification' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0033418 label: CUC codon-amino acid adaptor activity - SubClassOf('CUC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0004884 label: ecdysteroid hormone receptor activity - SubClassOf('ecdysteroid hormone receptor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0030424 label: axon - SubClassOf('axon' 'neuron projection') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061419 label: positive regulation of transcription from RNA polymerase II promoter in response to hypoxia - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to hypoxia' 'regulation of transcription from RNA polymerase II promoter in response to hypoxia') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to hypoxia' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_33511 label: Deuterostomia - SubClassOf('Deuterostomia' 'Bilateria') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070902 label: mitochondrial tRNA pseudouridine synthesis - EquivalentClasses('tRNA pseudouridine synthesis' 'mitochondrial tRNA pseudouridine synthesis' ) - SubClassOf('mitochondrial tRNA pseudouridine synthesis' 'mitochondrial tRNA modification') - SubClassOf('mitochondrial tRNA pseudouridine synthesis' 'tRNA pseudouridine synthesis') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010892 label: positive regulation of mitochondrial translation in response to stress - SubClassOf('positive regulation of mitochondrial translation in response to stress' 'positive regulation of mitochondrial translation') - SubClassOf('positive regulation of mitochondrial translation in response to stress' 'positive regulation of translation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070903 label: mitochondrial tRNA thio-modification - SubClassOf('mitochondrial tRNA thio-modification' 'tRNA thio-modification') - SubClassOf('mitochondrial tRNA thio-modification' 'mitochondrial tRNA modification') - EquivalentClasses('tRNA thio-modification' 'mitochondrial tRNA thio-modification' ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000169 label: KaposiSarcoma - SubClassOf('KaposiSarcoma' 'IntermediateGradeNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060194 label: regulation of antisense RNA transcription - SubClassOf('regulation of antisense RNA transcription' 'regulation of transcription, DNA-dependent') - EquivalentClasses('regulation of antisense RNA transcription' ObjectSomeValueFrom('regulates' 'antisense RNA transcription') ) - SubClassOf('regulation of antisense RNA transcription' ObjectSomeValueFrom('regulates' 'antisense RNA transcription')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001215 label: metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription - SubClassOf('metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription' 'metal ion regulated sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription') - SubClassOf('metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription' 'metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033414 label: UGC codon-amino acid adaptor activity - SubClassOf('UGC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000831 label: gene_member_region - SubClassOf('gene_member_region' 'biological_region') - SubClassOf('gene_member_region' ObjectSomeValueFrom('member_of' 'gene')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000127 label: silenced_gene - SubClassOf('silenced_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031648 label: protein destabilization - SubClassOf('protein destabilization' 'regulation of protein stability') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070322 label: negative regulation of translation in response to nitrogen starvation - SubClassOf('negative regulation of translation in response to nitrogen starvation' 'regulation of translation in response to nitrogen starvation') - SubClassOf('negative regulation of translation in response to nitrogen starvation' 'negative regulation of translation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044305 label: calyx of Held - SubClassOf('calyx of Held' 'axon terminus') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000276 label: miRNA - SubClassOf('miRNA' ObjectSomeValueFrom('affectsTumor' 'Tumor')) - SubClassOf('miRNA' 'small_regulatory_ncRNA') - SubClassOf('miRNA' ObjectSomeValueFrom('miRNAExpressedln' 'process')) - SubClassOf('miRNA' ObjectSomeValueFrom('hasBinding' 'MiRNABinding')) - SubClassOf('miRNA' ObjectSomeValueFrom('upRegulateEvent' 'processual_entity')) - SubClassOf('miRNA' ObjectSomeValueFrom('regulateTarget' 'gene')) - SubClassOf('miRNA' ObjectSomeValueFrom('regulateEvent' 'processual_entity')) - SubClassOf('miRNA' ObjectSomeValueFrom('inOrgan' 'AnatomicFeature')) - SubClassOf('miRNA' ObjectSomeValueFrom('regulatemRNATranslation' 'mRNA')) - SubClassOf('miRNA' ObjectSomeValueFrom('upRegulateTarget' 'gene')) - SubClassOf('miRNA' ObjectSomeValueFrom('inOrganism' 'Organism')) - SubClassOf('miRNA' ObjectSomeValueFrom('regulatencRNAFunction' 'ncRNA')) - SubClassOf('miRNA' ObjectSomeValueFrom('downRegulateTarget' 'gene')) - SubClassOf('miRNA' ObjectSomeValueFrom('downRegulateEvent' 'processual_entity')) - SubClassOf('miRNA' ObjectSomeValueFrom('derives_from' 'miRNA_primary_transcript')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0044544 label: envenomation resulting in plasminogen activation in other organism - SubClassOf('envenomation resulting in plasminogen activation in other organism' ObjectSomeValueFrom('has_part' 'plasminogen activation in other organism')) - SubClassOf('envenomation resulting in plasminogen activation in other organism' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071683 label: sensory dendrite - SubClassOf('sensory dendrite' 'dendrite') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045944 label: positive regulation of transcription from RNA polymerase II promoter - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of phosphatidylcholine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('positive regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter')) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in heart development' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of sodium ion transport by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of phospholipid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of ethanol catabolic process by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription involved in G1/S transition of mitotic cell cycle' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of sulfite transport by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter during mitosis' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response' 'positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in norepinephrine biosynthetic process' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation' 'positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in defense response to fungus' ) - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription, DNA-dependent') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001191 label: RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription - SubClassOf('RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription' ObjectSomeValueFrom('part_of' 'negative regulation of transcription from RNA polymerase II promoter')) - SubClassOf('RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription' 'RNA polymerase II transcription factor binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044725 label: chromatin reprogramming in the zygote - SubClassOf('chromatin reprogramming in the zygote' 'DNA methylation involved in embryo development') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900374 label: positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter - SubClassOf('positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#PR_000021937 label: initiator methionine - SubClassOf('initiator methionine' 'immature protein part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036252 label: positive regulation of transcription from RNA polymerase II promoter in response to menadione - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to menadione' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070920 label: regulation of production of small RNA involved in gene silencing by RNA - SubClassOf('regulation of production of small RNA involved in gene silencing by RNA' 'regulation of gene silencing by RNA') - SubClassOf('regulation of production of small RNA involved in gene silencing by RNA' ObjectSomeValueFrom('regulates' 'production of small RNA involved in gene silencing by RNA')) - SubClassOf('regulation of production of small RNA involved in gene silencing by RNA' 'regulation of gene expression') - EquivalentClasses('regulation of production of small RNA involved in gene silencing by RNA' ObjectSomeValueFrom('regulates' 'production of small RNA involved in gene silencing by RNA') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0036129 label: negative regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide - SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide' 'negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090065 label: regulation of production of siRNA involved in RNA interference - SubClassOf('regulation of production of siRNA involved in RNA interference' 'regulation of RNA interference') - EquivalentClasses('regulation of production of siRNA involved in RNA interference' ObjectSomeValueFrom('regulates' 'production of siRNA involved in RNA interference') ) - SubClassOf('regulation of production of siRNA involved in RNA interference' 'regulation of production of small RNA involved in gene silencing by RNA') - SubClassOf('regulation of production of siRNA involved in RNA interference' ObjectSomeValueFrom('regulates' 'production of siRNA involved in RNA interference')) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_193537 label: Centroheliozoa - SubClassOf('Centroheliozoa' 'Eukaryota') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000375 label: Kidney - SubClassOf('Kidney' 'UrinaryOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033453 label: GCU codon-amino acid adaptor activity - SubClassOf('GCU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0036404 label: conversion of ds siRNA to ss siRNA - SubClassOf('conversion of ds siRNA to ss siRNA' ObjectSomeValueFrom('part_of' 'dsRNA fragmentation')) - SubClassOf('conversion of ds siRNA to ss siRNA' 'RNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0008135 label: translation factor activity, nucleic acid binding - SubClassOf('translation factor activity, nucleic acid binding' ObjectSomeValueFrom('part_of' 'translation')) - SubClassOf('translation factor activity, nucleic acid binding' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0048788 label: presynaptic cytoskeletal matrix assembled at active zones - SubClassOf('presynaptic cytoskeletal matrix assembled at active zones' 'neuron part') - EquivalentClasses('presynaptic cytoskeletal matrix assembled at active zones' ObjectSomeValueFrom('part_of' 'presynaptic active zone') ) - SubClassOf('presynaptic cytoskeletal matrix assembled at active zones' ObjectSomeValueFrom('part_of' 'presynaptic active zone')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000995 label: consensus_mRNA - SubClassOf('consensus_mRNA' 'mRNA') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033442 label: AAC codon-amino acid adaptor activity - SubClassOf('AAC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000123 label: Treatment - SubClassOf('Treatment' 'process_aggregate') - SubClassOf('Treatment' ObjectSomeValueFrom('treats' 'Disease')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001198 label: negative regulation of mating-type specific transcription from RNA polymerase II promoter - SubClassOf('negative regulation of mating-type specific transcription from RNA polymerase II promoter' 'negative regulation of mating-type specific transcription, DNA-dependent') - SubClassOf('negative regulation of mating-type specific transcription from RNA polymerase II promoter' 'regulation of mating-type specific transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#snap_MaterialEntity label: material_entity - EquivalentClasses('material_entity' ObjectUnionOf('fiat_object_part' 'object' 'object_aggregate') ) - SubClassOf('material_entity' 'independent_continuant') - DisjointClasses('material_entity' 'object_boundary') - DisjointClasses('material_entity' 'site') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039599 label: cleavage by virus of host mRNA - SubClassOf('cleavage by virus of host mRNA' 'mRNA cleavage') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001106 label: RNA polymerase II transcription corepressor activity - SubClassOf('RNA polymerase II transcription corepressor activity' 'RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription') - SubClassOf('RNA polymerase II transcription corepressor activity' ObjectSomeValueFrom('part_of' 'negative regulation of transcription from RNA polymerase II promoter')) - SubClassOf('RNA polymerase II transcription corepressor activity' 'RNA polymerase II transcription cofactor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060469 label: positive regulation of transcription involved in egg activation - SubClassOf('positive regulation of transcription involved in egg activation' 'positive regulation of transcription, DNA-dependent') - SubClassOf('positive regulation of transcription involved in egg activation' 'biological_process') - EquivalentClasses('positive regulation of transcription, DNA-dependent' 'positive regulation of transcription involved in egg activation' ) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000202 label: TCellGranularLymphocyticLeukemia - SubClassOf('TCellGranularLymphocyticLeukemia' 'MatureTOrNKCellNeoplasm') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000469 label: cleavage involved in rRNA processing - EquivalentClasses('cleavage involved in rRNA processing' ObjectSomeValueFrom('part_of' 'rRNA processing') ) - SubClassOf('cleavage involved in rRNA processing' ObjectSomeValueFrom('part_of' 'rRNA processing')) - SubClassOf('cleavage involved in rRNA processing' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0038175 label: negative regulation of SREBP signaling pathway in response to increased oxygen levels - SubClassOf('negative regulation of SREBP signaling pathway in response to increased oxygen levels' 'negative regulation of SREBP signaling pathway') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000117 label: regulation of transcription involved in G2/M transition of mitotic cell cycle - EquivalentClasses('regulation of transcription involved in G2/M transition of mitotic cell cycle' 'regulation of transcription, DNA-dependent' ) - SubClassOf('regulation of transcription involved in G2/M transition of mitotic cell cycle' 'biological_process') - SubClassOf('regulation of transcription involved in G2/M transition of mitotic cell cycle' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032063 label: negative regulation of translational initiation in response to osmotic stress - SubClassOf('negative regulation of translational initiation in response to osmotic stress' 'negative regulation of translation in response to osmotic stress') - SubClassOf('negative regulation of translational initiation in response to osmotic stress' 'regulation of translational initiation in response to osmotic stress') - SubClassOf('negative regulation of translational initiation in response to osmotic stress' 'negative regulation of translational initiation in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071951 label: conversion of methionyl-tRNA to N-formyl-methionyl-tRNA - SubClassOf('conversion of methionyl-tRNA to N-formyl-methionyl-tRNA' 'charged-tRNA amino acid modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900422 label: positive regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('positive regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('positive regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031070 label: intronic snoRNA processing - SubClassOf('intronic snoRNA processing' 'snoRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001186 label: RNA polymerase I transcription factor recruiting transcription factor activity - SubClassOf('RNA polymerase I transcription factor recruiting transcription factor activity' 'RNA polymerase I transcription factor binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034403 label: alignment of 3' and 5' splice sites of mRNA - SubClassOf('alignment of 3' and 5' splice sites of mRNA' ObjectSomeValueFrom('part_of' 'generation of catalytic spliceosome for second transesterification step')) - SubClassOf('alignment of 3' and 5' splice sites of mRNA' 'mRNA 5'-splice site recognition') - SubClassOf('alignment of 3' and 5' splice sites of mRNA' 'mRNA 3'-splice site recognition') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044727 label: DNA demethylation of male pronucleus - SubClassOf('DNA demethylation of male pronucleus' 'DNA methylation involved in embryo development') - SubClassOf('DNA demethylation of male pronucleus' ObjectSomeValueFrom('part_of' 'chromatin reprogramming in the zygote')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0050686 label: negative regulation of mRNA processing - SubClassOf('negative regulation of mRNA processing' 'regulation of mRNA processing') - EquivalentClasses('negative regulation of mRNA processing' ObjectSomeValueFrom('negatively_regulates' 'mRNA processing') ) - SubClassOf('negative regulation of mRNA processing' ObjectSomeValueFrom('negatively_regulates' 'mRNA processing')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0045903 label: positive regulation of translational fidelity - SubClassOf('positive regulation of translational fidelity' 'regulation of translational fidelity') - SubClassOf('positive regulation of translational fidelity' 'positive regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006346 label: methylation-dependent chromatin silencing - SubClassOf('methylation-dependent chromatin silencing' 'chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000823 label: regulation of androgen receptor activity - SubClassOf('regulation of androgen receptor activity' 'regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of androgen receptor activity' ObjectSomeValueFrom('regulates' 'androgen receptor activity')) - SubClassOf('regulation of androgen receptor activity' 'regulation of sequence-specific DNA binding transcription factor activity') - EquivalentClasses('regulation of androgen receptor activity' ObjectSomeValueFrom('regulates' 'androgen receptor activity') ) --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_376913 label: Haplorrhini - SubClassOf('Haplorrhini' 'Primates') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900393 label: regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') - SubClassOf('regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000621 label: RNApol_III_promoter_type_3 - SubClassOf('RNApol_III_promoter_type_3' 'RNApol_III_promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006342 label: chromatin silencing - SubClassOf('chromatin silencing' 'negative regulation of transcription, DNA-dependent') - SubClassOf('chromatin silencing' 'gene silencing') - SubClassOf('chromatin silencing' 'negative regulation of gene expression, epigenetic') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097416 label: Lewy body-like hyaline inclusion - SubClassOf('Lewy body-like hyaline inclusion' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070158 label: mitochondrial seryl-tRNA aminoacylation - EquivalentClasses('seryl-tRNA aminoacylation' 'mitochondrial seryl-tRNA aminoacylation' ) - SubClassOf('mitochondrial seryl-tRNA aminoacylation' 'seryl-tRNA aminoacylation') - SubClassOf('mitochondrial seryl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031937 label: positive regulation of chromatin silencing - SubClassOf('positive regulation of chromatin silencing' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing')) - EquivalentClasses('positive regulation of chromatin silencing' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing') ) - SubClassOf('positive regulation of chromatin silencing' 'regulation of chromatin silencing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001010 label: sequence-specific DNA binding transcription factor recruiting transcription factor activity - SubClassOf('sequence-specific DNA binding transcription factor recruiting transcription factor activity' 'sequence-specific DNA binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000281 label: AorticValve - SubClassOf('AorticValve' 'Valves') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045959 label: negative regulation of complement activation, classical pathway - SubClassOf('negative regulation of complement activation, classical pathway' 'negative regulation of complement activation') - SubClassOf('negative regulation of complement activation, classical pathway' 'regulation of complement activation, classical pathway') --- Class Changed: http://purl.org/obo/owl/omit#GO_0052735 label: tRNA (cytosine-3-)-methyltransferase activity - SubClassOf('tRNA (cytosine-3-)-methyltransferase activity' 'tRNA (cytosine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000058 label: AdiposeTissueCell - SubClassOf('AdiposeTissueCell' 'ConnectiveTissueCell') --- Class Changed: http://purl.org/obo/owl/omit#span_ConnectedSpatiotemporalRegion label: connected_spatiotemporal_region - SubClassOf('connected_spatiotemporal_region' 'spatiotemporal_region') - DisjointClasses('connected_spatiotemporal_region' 'scattered_spatiotemporal_region') - EquivalentClasses('connected_spatiotemporal_region' ObjectUnionOf('spatiotemporal_instant' 'spatiotemporal_interval') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0061426 label: positive regulation of sulfite transport by positive regulation of transcription from RNA polymerase II promoter - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of sulfite transport by positive regulation of transcription from RNA polymerase II promoter' ) - SubClassOf('positive regulation of sulfite transport by positive regulation of transcription from RNA polymerase II promoter' 'biological_process') - SubClassOf('positive regulation of sulfite transport by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031591 label: wybutosine biosynthetic process - SubClassOf('wybutosine biosynthetic process' 'tRNA modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_1901489 label: positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process in response to decreased oxygen levels - SubClassOf('positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process in response to decreased oxygen levels' 'positive regulation of SREBP signaling pathway in response to decreased oxygen levels') - SubClassOf('positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process in response to decreased oxygen levels' 'positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process') - EquivalentClasses('positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process in response to decreased oxygen levels' ObjectSomeValueFrom('results_in' 'positive regulation of SREBP signaling pathway in response to decreased oxygen levels') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0035087 label: siRNA loading onto RISC involved in RNA interference - SubClassOf('siRNA loading onto RISC involved in RNA interference' 'small RNA loading onto RISC') - SubClassOf('siRNA loading onto RISC involved in RNA interference' ObjectSomeValueFrom('part_of' 'RNA interference')) --- Class Changed: http://purl.org/obo/owl/omit#SO_0000892 label: positively_autoregulated_gene - SubClassOf('positively_autoregulated_gene' 'gene') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000369 label: Lungs - SubClassOf('Lungs' 'LowerRespiratoryTract') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000065 label: Monocytes - SubClassOf('Monocytes' 'Agranulocyte') --- Class Changed: http://purl.org/obo/owl/omit#GO_0032590 label: dendrite membrane - SubClassOf('dendrite membrane' 'neuron projection membrane') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046012 label: positive regulation of oskar mRNA translation - SubClassOf('positive regulation of oskar mRNA translation' 'regulation of oskar mRNA translation') - SubClassOf('positive regulation of oskar mRNA translation' 'positive regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006990 label: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response - SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response' 'biological_process') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response' 'positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus') - EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response' 'positive regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#SO_0001695 label: restriction_enzyme_single_strand_overhang - SubClassOf('restriction_enzyme_single_strand_overhang' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070151 label: mitochondrial histidyl-tRNA aminoacylation - SubClassOf('mitochondrial histidyl-tRNA aminoacylation' 'histidyl-tRNA aminoacylation') - EquivalentClasses('histidyl-tRNA aminoacylation' 'mitochondrial histidyl-tRNA aminoacylation' ) - SubClassOf('mitochondrial histidyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0071040 label: nuclear polyadenylation-dependent antisense transcript catabolic process - SubClassOf('nuclear polyadenylation-dependent antisense transcript catabolic process' 'nuclear polyadenylation-dependent ncRNA catabolic process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033424 label: CCG codon-amino acid adaptor activity - SubClassOf('CCG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0048026 label: positive regulation of mRNA splicing, via spliceosome - SubClassOf('positive regulation of mRNA splicing, via spliceosome' ObjectSomeValueFrom('positively_regulates' 'mRNA splicing, via spliceosome')) - SubClassOf('positive regulation of mRNA splicing, via spliceosome' 'regulation of mRNA splicing, via spliceosome') - EquivalentClasses('positive regulation of mRNA splicing, via spliceosome' ObjectSomeValueFrom('positively_regulates' 'mRNA splicing, via spliceosome') ) - SubClassOf('positive regulation of mRNA splicing, via spliceosome' 'positive regulation of RNA splicing') - SubClassOf('positive regulation of mRNA splicing, via spliceosome' 'positive regulation of mRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0033422 label: CCC codon-amino acid adaptor activity - SubClassOf('CCC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000306 label: Pancreas - SubClassOf('Pancreas' 'DigestiveOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006417 label: regulation of translation - SubClassOf('regulation of translation' ObjectSomeValueFrom('regulates' 'translation')) - EquivalentClasses('regulation of translation' ObjectSomeValueFrom('regulates' 'translation') ) - EquivalentClasses('regulation of translation' 'regulation of translation involved in anterior/posterior axis specification' ) - SubClassOf('regulation of translation' 'posttranscriptional regulation of gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_0007249 label: I-kappaB kinase/NF-kappaB cascade - SubClassOf('I-kappaB kinase/NF-kappaB cascade' ObjectSomeValueFrom('has_part' 'positive regulation of NF-kappaB transcription factor activity')) - SubClassOf('I-kappaB kinase/NF-kappaB cascade' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#snap_Object label: object - DisjointClasses('object' 'object'Boundary) - DisjointClasses('object' 'site') - DisjointClasses('object' 'object_aggregate') - DisjointClasses('fiat_object_part' 'object') - SubClassOf('object' 'material_entity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001677 label: formation of translation initiation ternary complex - SubClassOf('formation of translation initiation ternary complex' ObjectSomeValueFrom('part_of' 'translational initiation')) - SubClassOf('formation of translation initiation ternary complex' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001227 label: RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription - SubClassOf('RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' 'sequence-specific DNA binding RNA polymerase II transcription factor activity') - SubClassOf('RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' ObjectSomeValueFrom('part_of' 'negative regulation of transcription from RNA polymerase II promoter')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000028 label: Pressure - SubClassOf('Pressure' 'EnvironmentalVariable') --- Class Changed: http://purl.org/obo/owl/omit#GO_1900464 label: negative regulation of cellular hyperosmotic salinity response by negative regulation of transcription from RNA polymerase II promoter - SubClassOf('negative regulation of cellular hyperosmotic salinity response by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') - SubClassOf('negative regulation of cellular hyperosmotic salinity response by negative regulation of transcription from RNA polymerase II promoter' 'biological_process') - EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cellular hyperosmotic salinity response by negative regulation of transcription from RNA polymerase II promoter' ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0070131 label: positive regulation of mitochondrial translation - SubClassOf('positive regulation of mitochondrial translation' ObjectSomeValueFrom('positively_regulates' 'mitochondrial translation')) - EquivalentClasses('positive regulation of mitochondrial translation' ObjectSomeValueFrom('positively_regulates' 'mitochondrial translation') ) - SubClassOf('positive regulation of mitochondrial translation' 'regulation of mitochondrial translation') - SubClassOf('positive regulation of mitochondrial translation' 'positive regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002105 label: endonucleolytic cleaveage between LSU-rRNA and 4.5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) - SubClassOf('endonucleolytic cleaveage between LSU-rRNA and 4.5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)' 'endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000221 label: PapillaryPulmonaryAdenocarcinoma - SubClassOf('PapillaryPulmonaryAdenocarcinoma' 'PulmonaryAdenocarcinoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010723 label: positive regulation of transcription from RNA polymerase II promoter in response to iron - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to iron' 'regulation of transcription from RNA polymerase II promoter in response to iron') - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to iron' 'positive regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0031051 label: scnRNA production - SubClassOf('scnRNA production' 'dsRNA fragmentation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034402 label: recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex - SubClassOf('recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex' 'biological_process') - SubClassOf('recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex' ObjectSomeValueFrom('part_of' 'mRNA 3'-end processing')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0072212 label: regulation of transcription from RNA polymerase II promoter involved in metanephros development - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in metanephros development' ) - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in metanephros development' 'biological_process') - SubClassOf('regulation of transcription from RNA polymerase II promoter involved in metanephros development' 'regulation of transcription from RNA polymerase II promoter involved in kidney development') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090375 label: negative regulation of transcription from RNA polymerase II promoter in response to iron ion starvation - SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to iron ion starvation' 'regulation of transcription from RNA polymerase II promoter in response to iron ion starvation') - SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to iron ion starvation' 'negative regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061401 label: positive regulation of transcription from RNA polymerase II promoter in response to a hypotonic environment - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to a hypotonic environment' 'positive regulation of transcription from RNA polymerase II promoter in response to osmotic stress') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000455 label: gene_with_mRNA_with_frameshift - SubClassOf('gene_with_mRNA_with_frameshift' 'protein_coding_gene') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045896 label: regulation of transcription during mitosis - SubClassOf('regulation of transcription during mitosis' 'regulation of transcription, DNA-dependent') - EquivalentClasses('regulation of transcription, DNA-dependent' 'regulation of transcription during mitosis' ) - SubClassOf('regulation of transcription during mitosis' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000806 label: AdvantageousRegulation - SubClassOf('AdvantageousRegulation' ObjectSomeValueFrom('resultedFrom' 'TEInsertion')) - SubClassOf('AdvantageousRegulation' 'Regulation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000455 label: enzyme-directed rRNA pseudouridine synthesis - SubClassOf('enzyme-directed rRNA pseudouridine synthesis' 'rRNA pseudouridine synthesis') --- Class Changed: http://purl.org/obo/owl/omit#GO_0004482 label: mRNA (guanine-N7-)-methyltransferase activity - SubClassOf('mRNA (guanine-N7-)-methyltransferase activity' ObjectSomeValueFrom('part_of' 'RNA (guanine-N7)-methylation')) - SubClassOf('mRNA (guanine-N7-)-methyltransferase activity' ObjectSomeValueFrom('part_of' '7-methylguanosine mRNA capping')) - SubClassOf('mRNA (guanine-N7-)-methyltransferase activity' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070183 label: mitochondrial tryptophanyl-tRNA aminoacylation - EquivalentClasses('tryptophanyl-tRNA aminoacylation' 'mitochondrial tryptophanyl-tRNA aminoacylation' ) - SubClassOf('mitochondrial tryptophanyl-tRNA aminoacylation' 'tryptophanyl-tRNA aminoacylation') - SubClassOf('mitochondrial tryptophanyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001682 label: tRNA 5'-leader removal - SubClassOf('tRNA 5'-leader removal' 'tRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000303 label: Jejunum - SubClassOf('Jejunum' 'DigestiveOrgan') - SubClassOf('Jejunum' 'fiat_object_part') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000249 label: IntegumentaryOrgan - SubClassOf('IntegumentaryOrgan' 'AnatomicFeature') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060211 label: regulation of nuclear-transcribed mRNA poly(A) tail shortening - SubClassOf('regulation of nuclear-transcribed mRNA poly(A) tail shortening' ObjectSomeValueFrom('regulates' 'nuclear-transcribed mRNA poly(A) tail shortening')) - EquivalentClasses('regulation of nuclear-transcribed mRNA poly(A) tail shortening' ObjectSomeValueFrom('regulates' 'nuclear-transcribed mRNA poly(A) tail shortening') ) - SubClassOf('regulation of nuclear-transcribed mRNA poly(A) tail shortening' 'regulation of mRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039644 label: suppression by virus of host NF-kappaB transcription factor activity - SubClassOf('suppression by virus of host NF-kappaB transcription factor activity' 'suppression by virus of host transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0060849 label: regulation of transcription involved in lymphatic endothelial cell fate commitment - SubClassOf('regulation of transcription involved in lymphatic endothelial cell fate commitment' 'regulation of transcription involved in cell fate commitment') - EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in lymphatic endothelial cell fate commitment' ) - SubClassOf('regulation of transcription involved in lymphatic endothelial cell fate commitment' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_8287 label: Sarcopterygii - SubClassOf('Sarcopterygii' 'Euteleostomi') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070043 label: rRNA (guanine-N7-)-methyltransferase activity - SubClassOf('rRNA (guanine-N7-)-methyltransferase activity' 'rRNA (guanine) methyltransferase activity') - SubClassOf('rRNA (guanine-N7-)-methyltransferase activity' ObjectSomeValueFrom('part_of' 'rRNA (guanine-N7)-methylation')) --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000218 label: AcinarPulmonaryAdenocarcinoma - SubClassOf('AcinarPulmonaryAdenocarcinoma' 'PulmonaryAdenocarcinoma') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042791 label: 5S class rRNA transcription from RNA polymerase III type 1 promoter - SubClassOf('5S class rRNA transcription from RNA polymerase III type 1 promoter' 'transcription from RNA polymerase III promoter') - SubClassOf('5S class rRNA transcription from RNA polymerase III type 1 promoter' 'rRNA transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061412 label: positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation - SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006351 label: transcription, DNA-dependent - SubClassOf('transcription, DNA-dependent' ObjectSomeValueFrom('part_of' 'gene expression')) - EquivalentClasses('transcription, DNA-dependent' 'transcription from mitochondrial promoter' ) - SubClassOf('transcription, DNA-dependent' 'biological_process') --- Class Changed: http://purl.org/obo/owl/omit#GO_0044224 label: juxtaparanode region of axon - SubClassOf('juxtaparanode region of axon' 'axon part') - SubClassOf('juxtaparanode region of axon' ObjectSomeValueFrom('part_of' 'main axon')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0001151 label: bacterial-type RNA polymerase transcription enhancer sequence-specific DNA binding transcription factor activity - SubClassOf('bacterial-type RNA polymerase transcription enhancer sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0039524 label: suppression by virus of host mRNA processing - SubClassOf('suppression by virus of host mRNA processing' 'modification by virus of host mRNA processing') - SubClassOf('suppression by virus of host mRNA processing' 'suppression by virus of host gene expression') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061434 label: regulation of replicative cell aging by regulation of transcription from RNA polymerase II promoter in response to caloric restriction - SubClassOf('regulation of replicative cell aging by regulation of transcription from RNA polymerase II promoter in response to caloric restriction' 'regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_4751 label: Fungi - SubClassOf('Fungi' 'Opisthokonta') --- Class Changed: http://purl.org/obo/owl/omit#GO_0035511 label: oxidative DNA demethylation - SubClassOf('oxidative DNA demethylation' 'DNA demethylation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0010424 label: DNA methylation on cytosine within a CG sequence - SubClassOf('DNA methylation on cytosine within a CG sequence' 'DNA methylation on cytosine') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000290 label: PulmonaryVeins - SubClassOf('PulmonaryVeins' 'Vein') --- Class Changed: http://purl.org/obo/owl/omit#GO_0061174 label: type I terminal bouton - SubClassOf('type I terminal bouton' 'terminal bouton') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000983 label: RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity - SubClassOf('RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding RNA polymerase II transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000146 label: BenignNeoplasm - SubClassOf('BenignNeoplasm' 'Tumor') --- Class Changed: http://purl.org/obo/owl/omit#GO_0070921 label: regulation of production of siRNA involved in chromatin silencing by small RNA - SubClassOf('regulation of production of siRNA involved in chromatin silencing by small RNA' ObjectSomeValueFrom('regulates' 'production of siRNA involved in chromatin silencing by small RNA')) - SubClassOf('regulation of production of siRNA involved in chromatin silencing by small RNA' 'regulation of production of small RNA involved in gene silencing by RNA') - EquivalentClasses('regulation of production of siRNA involved in chromatin silencing by small RNA' ObjectSomeValueFrom('regulates' 'production of siRNA involved in chromatin silencing by small RNA') ) - SubClassOf('regulation of production of siRNA involved in chromatin silencing by small RNA' 'regulation of chromatin silencing by small RNA') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000276 label: InterventricularSeptum - SubClassOf('InterventricularSeptum' 'Heart') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000071 label: Basophils - SubClassOf('Basophils' 'Granulocyte') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001037 label: mobile_genetic_element - SubClassOf('mobile_genetic_element' 'biological_region') --- Class Changed: http://purl.org/obo/owl/omit#GO_0034396 label: negative regulation of transcription from RNA polymerase II promoter in response to iron - SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to iron' 'regulation of transcription from RNA polymerase II promoter in response to iron') - SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to iron' 'negative regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000027 label: GeneSequence - SubClassOf('GeneSequence' 'quality') --- Class Changed: http://purl.org/obo/owl/omit#GO_0016430 label: tRNA (adenine-N6-)-methyltransferase activity - SubClassOf('tRNA (adenine-N6-)-methyltransferase activity' 'tRNA (adenine) methyltransferase activity') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000305 label: Mesentery - SubClassOf('Mesentery' 'DigestiveOrgan') --- Class Changed: http://purl.org/obo/owl/omit#GO_0072369 label: regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter - SubClassOf('regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') - EquivalentClasses('regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) - SubClassOf('regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter' 'regulation of lipid transport by regulation of transcription from RNA polymerase II promoter') --- Class Changed: http://purl.org/obo/owl/omit#GO_0042795 label: snRNA transcription from RNA polymerase II promoter - SubClassOf('snRNA transcription from RNA polymerase II promoter' 'transcription from RNA polymerase II promoter') - SubClassOf('snRNA transcription from RNA polymerase II promoter' 'snRNA transcription') --- Class Changed: http://purl.org/obo/owl/omit#SO_0001227 label: gene_silenced_by_histone_deacetylation - SubClassOf('gene_silenced_by_histone_deacetylation' 'gene_silenced_by_histone_modification') --- Class Changed: http://purl.org/obo/owl/omit#GO_0046793 label: induction by virus of modification of host RNA polymerase II - SubClassOf('induction by virus of modification of host RNA polymerase II' 'modulation by virus of host transcription') --- Class Changed: http://purl.org/obo/owl/omit#GO_0000289 label: nuclear-transcribed mRNA poly(A) tail shortening - SubClassOf('nuclear-transcribed mRNA poly(A) tail shortening' 'mRNA 3'-end processing') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_9592 label: Gorilla - SubClassOf('Gorilla' 'Homininae') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000344 label: VentriclesOfBrain - SubClassOf('VentriclesOfBrain' 'Brain') --- Class Changed: http://purl.org/obo/owl/omit#GO_2000765 label: regulation of cytoplasmic translation - SubClassOf('regulation of cytoplasmic translation' ObjectSomeValueFrom('regulates' 'cytoplasmic translation')) - EquivalentClasses('regulation of cytoplasmic translation' ObjectSomeValueFrom('regulates' 'cytoplasmic translation') ) - SubClassOf('regulation of cytoplasmic translation' 'regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0097481 label: neuronal postsynaptic density - SubClassOf('neuronal postsynaptic density' ObjectSomeValueFrom('part_of' 'dendritic spine head')) - SubClassOf('neuronal postsynaptic density' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002104 label: endonucleolytic cleaveage between 4.5S rRNA and 5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) - SubClassOf('endonucleolytic cleaveage between 4.5S rRNA and 5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)' 'endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)') --- Class Changed: http://purl.org/obo/owl/omit#GO_0001132 label: TBP-class protein binding RNA polymerase II transcription factor activity - SubClassOf('TBP-class protein binding RNA polymerase II transcription factor activity' 'RNA polymerase II basal transcription factor binding transcription factor activity') --- Class Changed: http://purl.org/obo/owl/omit#GO_0090054 label: regulation of chromatin silencing at silent mating-type cassette - SubClassOf('regulation of chromatin silencing at silent mating-type cassette' ObjectSomeValueFrom('regulates' 'chromatin silencing at silent mating-type cassette')) - SubClassOf('regulation of chromatin silencing at silent mating-type cassette' 'regulation of chromatin silencing') - EquivalentClasses('regulation of chromatin silencing at silent mating-type cassette' ObjectSomeValueFrom('regulates' 'chromatin silencing at silent mating-type cassette') ) --- Class Changed: http://purl.org/obo/owl/omit#GO_0031126 label: snoRNA 3'-end processing - SubClassOf('snoRNA 3'-end processing' 'ncRNA 3'-end processing') - SubClassOf('snoRNA 3'-end processing' 'snoRNA processing') --- Class Changed: http://purl.org/obo/owl/omit#GO_1990026 label: hippocampal mossy fiber expansion - SubClassOf('hippocampal mossy fiber expansion' 'terminal bouton') --- Class Changed: http://purl.org/obo/owl/omit#SO_0000727 label: CRM - SubClassOf('CRM' 'transcriptional_cis_regulatory_region') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_10197 label: Ctenophora - SubClassOf('Ctenophora' 'Eumetazoa') --- Class Changed: http://purl.org/obo/owl/omit#GO_0045727 label: positive regulation of translation - SubClassOf('positive regulation of translation' ObjectSomeValueFrom('positively_regulates' 'translation')) - EquivalentClasses('positive regulation of translation' ObjectSomeValueFrom('positively_regulates' 'translation') ) - SubClassOf('positive regulation of translation' 'regulation of translation') --- Class Changed: http://purl.org/obo/owl/omit#GO_0006618 label: SRP-dependent cotranslational protein targeting to membrane, signal sequence processing - SubClassOf('SRP-dependent cotranslational protein targeting to membrane, signal sequence processing' 'signal peptide processing') - SubClassOf('SRP-dependent cotranslational protein targeting to membrane, signal sequence processing' ObjectSomeValueFrom('part_of' 'SRP-dependent cotranslational protein targeting to membrane')) --- Class Changed: http://purl.org/obo/owl/omit#GO_0043005 label: neuron projection - SubClassOf('neuron projection' 'neuron part') --- Class Changed: http://purl.org/obo/owl/omit#NCBITaxon_7776 label: Gnathostomata - SubClassOf('Gnathostomata' 'Vertebrata') --- Class Changed: http://purl.org/obo/owl/omit#GO_0002926 label: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis. - SubClassOf('tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis.' 'tRNA wobble uridine modification') --- Class Changed: http://purl.org/obo/owl/omit#OMIT_0000302 label: Ileum - SubClassOf('Ileum' 'fiat_object_part') - SubClassOf('Ileum' 'DigestiveOrgan') @New Classes --- !New Class!: http://www.geneontology.org/go#GO_0016479 label: negative regulation of transcription from RNA polymerase I promoter + SubClassOf('negative regulation of transcription from RNA polymerase I promoter' 'negative regulation of transcription, DNA-dependent') + SubClassOf('negative regulation of transcription from RNA polymerase I promoter' 'regulation of transcription from RNA polymerase I promoter') + SubClassOf('negative regulation of transcription from RNA polymerase I promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase I promoter')) + EquivalentClasses('negative regulation of transcription from RNA polymerase I promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase I promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_0009302 label: snoRNA transcription + SubClassOf('snoRNA transcription' 'transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#MOD_00696 label: phosphorylated residue + SubClassOf('phosphorylated residue' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_1900472 label: positive regulation of phosphatidylcholine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of phosphatidylcholine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('positive regulation of phosphatidylcholine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of phospholipid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0071262 label: regulation of translational initiation in response to starvation + SubClassOf('regulation of translational initiation in response to starvation' 'regulation of translational initiation in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0052905 label: tRNA (guanine(9)-N(1))-methyltransferase activity + SubClassOf('tRNA (guanine(9)-N(1))-methyltransferase activity' 'tRNA (guanine-N1-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0000459 label: exonucleolytic trimming involved in rRNA processing + SubClassOf('exonucleolytic trimming involved in rRNA processing' 'cleavage involved in rRNA processing') + EquivalentClasses('exonucleolytic trimming involved in rRNA processing' ObjectSomeValueFrom('part_of' 'rRNA processing') ) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_7776 label: Gnathostomata + SubClassOf('Gnathostomata' 'Vertebrata') --- !New Class!: http://www.geneontology.org/go#MOD_00031 label: L-selenocysteine residue + SubClassOf('L-selenocysteine residue' 'pre-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_0006344 label: maintenance of chromatin silencing + SubClassOf('maintenance of chromatin silencing' ObjectSomeValueFrom('part_of' 'chromatin silencing')) --- !New Class!: http://www.geneontology.org/go#GO_0044280 label: subplasmalemmal coating + SubClassOf('subplasmalemmal coating' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0033437 label: ACU codon-amino acid adaptor activity + SubClassOf('ACU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0043856 label: anti-sigma factor antagonist activity + SubClassOf('anti-sigma factor antagonist activity' ObjectSomeValueFrom('part_of' 'positive regulation of transcription, DNA-dependent')) --- !New Class!: http://www.geneontology.org/go#SO_0000169 label: RNApol_I_promoter + SubClassOf('RNApol_I_promoter' 'RNA_polymerase_promoter') --- !New Class!: http://www.geneontology.org/go#GO_0043197 label: dendritic spine + SubClassOf('dendritic spine' 'neuron spine') + SubClassOf('dendritic spine' ObjectSomeValueFrom('part_of' 'dendrite')) --- !New Class!: http://www.geneontology.org/go#GO_0010978 label: gene silencing involved in chronological cell aging + SubClassOf('gene silencing involved in chronological cell aging' 'gene silencing') + EquivalentClasses('gene silencing involved in chronological cell aging' 'gene silencing' ) --- !New Class!: http://www.geneontology.org/go#GO_0061394 label: regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance + SubClassOf('regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#OMIT_0000347 label: ParasympatheticNervousSystem + SubClassOf('ParasympatheticNervousSystem' 'AutonomicNervousSystem') --- !New Class!: http://www.geneontology.org/go#GO_1901486 label: negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process + EquivalentClasses('negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process' ObjectSomeValueFrom('results_in' 'negative regulation of SREBP signaling pathway') ) + SubClassOf('negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process' 'negative regulation of SREBP signaling pathway') --- !New Class!: http://www.geneontology.org/go#GO_0060966 label: regulation of gene silencing by RNA + SubClassOf('regulation of gene silencing by RNA' ObjectSomeValueFrom('regulates' 'gene silencing by RNA')) + EquivalentClasses('regulation of gene silencing by RNA' ObjectSomeValueFrom('regulates' 'gene silencing by RNA') ) + SubClassOf('regulation of gene silencing by RNA' 'regulation of gene silencing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000483 label: Bacteria + SubClassOf('Bacteria' 'CellularOrganism') --- !New Class!: http://www.geneontology.org/go#OMIT_0000080 label: Oligodendrocyte + SubClassOf('Oligodendrocyte' 'MacroglialCell') --- !New Class!: http://www.geneontology.org/go#GO_0001073 label: DNA binding transcription antitermination factor activity + SubClassOf('DNA binding transcription antitermination factor activity' ObjectSomeValueFrom('part_of' 'transcription antitermination')) + SubClassOf('DNA binding transcription antitermination factor activity' 'sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0070127 label: tRNA aminoacylation for mitochondrial protein translation + SubClassOf('tRNA aminoacylation for mitochondrial protein translation' 'tRNA aminoacylation for protein translation') + SubClassOf('tRNA aminoacylation for mitochondrial protein translation' ObjectSomeValueFrom('part_of' 'mitochondrial translation')) --- !New Class!: http://www.geneontology.org/go#GO_0001133 label: sequence-specific transcription regulatory region DNA binding RNA polymerase II transcription factor recruiting transcription factor activity + SubClassOf('sequence-specific transcription regulatory region DNA binding RNA polymerase II transcription factor recruiting transcription factor activity' 'sequence-specific DNA binding transcription factor recruiting transcription factor activity') --- !New Class!: http://www.geneontology.org/go#SO_0000282 label: mRNA_with_minus_1_frameshift + SubClassOf('mRNA_with_minus_1_frameshift' 'mRNA_with_frameshift') --- !New Class!: http://www.geneontology.org/go#GO_0060597 label: regulation of transcription from RNA polymerase II promoter involved in mammary gland formation + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in mammary gland formation' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in mammary gland formation' ) --- !New Class!: http://www.geneontology.org/go#GO_0032058 label: positive regulation of translational initiation in response to stress + SubClassOf('positive regulation of translational initiation in response to stress' 'regulation of translational initiation in response to stress') + SubClassOf('positive regulation of translational initiation in response to stress' 'positive regulation of translational initiation') + SubClassOf('positive regulation of translational initiation in response to stress' 'positive regulation of translation in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0034471 label: ncRNA 5'-end processing + SubClassOf('ncRNA 5'-end processing' 'RNA 5'-end processing') + SubClassOf('ncRNA 5'-end processing' 'ncRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0000495 label: box H/ACA snoRNA 3'-end processing + SubClassOf('box H/ACA snoRNA 3'-end processing' 'box H/ACA snoRNA processing') + SubClassOf('box H/ACA snoRNA 3'-end processing' 'snoRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000158 label: PrimaryCardiacLipoma + SubClassOf('PrimaryCardiacLipoma' 'ConnectiveOrigin') --- !New Class!: http://www.geneontology.org/go#GO_0033458 label: GAC codon-amino acid adaptor activity + SubClassOf('GAC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#SO_0001669 label: RNApol_II_core_promoter + SubClassOf('RNApol_II_core_promoter' 'RNApol_II_promoter') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_40674 label: Mammalia + SubClassOf('Mammalia' 'Amniota') --- !New Class!: http://www.geneontology.org/go#GO_0033455 label: GCA codon-amino acid adaptor activity + SubClassOf('GCA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000353 label: MaleReproductiveSystem + SubClassOf('MaleReproductiveSystem' 'ReproductiveOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0031555 label: transcriptional attenuation + SubClassOf('transcriptional attenuation' 'regulation of DNA-dependent transcription, termination') --- !New Class!: http://www.geneontology.org/go#GO_0008650 label: rRNA (uridine-2'-O-)-methyltransferase activity + SubClassOf('rRNA (uridine-2'-O-)-methyltransferase activity' 'rRNA (uridine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0032591 label: dendritic spine membrane + SubClassOf('dendritic spine membrane' 'neuron projection membrane') + SubClassOf('dendritic spine membrane' ObjectSomeValueFrom('part_of' 'dendritic spine')) --- !New Class!: http://www.geneontology.org/go#GO_0030509 label: BMP signaling pathway + EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in mesodermal cell fate specification' ) + EquivalentClasses('BMP signaling pathway involved in spinal cord association neuron specification' 'BMP signaling pathway' ) + EquivalentClasses('BMP signaling pathway involved in spinal cord dorsal/ventral patterning' 'BMP signaling pathway' ) + EquivalentClasses('BMP signaling pathway' 'regulation of hair cycle by BMP signaling pathway' ) + EquivalentClasses('BMP signaling pathway' 'positive regulation of Wnt receptor signaling pathway by BMP signaling pathway' ) + EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in renal system segmentation' ) + EquivalentClasses('BMP signaling pathway' 'negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway' ) + EquivalentClasses('BMP signaling pathway involved in heart jogging' 'BMP signaling pathway' ) + EquivalentClasses('BMP signaling pathway involved in heart induction' 'BMP signaling pathway' ) + EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in ureter morphogenesis' ) + EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in heart development' ) + EquivalentClasses('BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'BMP signaling pathway' ) + SubClassOf('BMP signaling pathway' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('BMP signaling pathway involved in growth plate cartilage chondrocyte development' 'BMP signaling pathway' ) + EquivalentClasses('BMP signaling pathway involved in forebrain neuron fate commitment' 'BMP signaling pathway' ) + EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in Malpighian tubule cell chemotaxis' ) + EquivalentClasses('BMP signaling pathway involved in determination of left/right symmetry' 'BMP signaling pathway' ) + EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in nephric duct formation' ) --- !New Class!: http://www.geneontology.org/go#GO_1990026 label: hippocampal mossy fiber expansion + SubClassOf('hippocampal mossy fiber expansion' 'terminal bouton') --- !New Class!: http://www.geneontology.org/go#GO_1901228 label: positive regulation of transcription from RNA polymerase II promoter involved in heart development + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in heart development' ) + SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in heart development' 'positive regulation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in heart development' 'regulation of transcription from RNA polymerase II promoter involved in heart development') --- !New Class!: http://www.geneontology.org/go#GO_0039560 label: suppression by virus of host IRF9 activity + SubClassOf('suppression by virus of host IRF9 activity' 'suppression by virus of host transcription') --- !New Class!: http://www.geneontology.org/go#GO_0042347 label: negative regulation of NF-kappaB import into nucleus + SubClassOf('negative regulation of NF-kappaB import into nucleus' ObjectSomeValueFrom('negatively_regulates' 'NF-kappaB import into nucleus')) + EquivalentClasses('negative regulation of NF-kappaB import into nucleus' ObjectSomeValueFrom('negatively_regulates' 'NF-kappaB import into nucleus') ) + SubClassOf('negative regulation of NF-kappaB import into nucleus' 'regulation of NF-kappaB import into nucleus') --- !New Class!: http://www.geneontology.org/go#GO_1900145 label: regulation of nodal signaling pathway involved in determination of left/right asymmetry + SubClassOf('regulation of nodal signaling pathway involved in determination of left/right asymmetry' ObjectSomeValueFrom('regulates' 'nodal signaling pathway involved in determination of left/right asymmetry')) + EquivalentClasses('regulation of nodal signaling pathway involved in determination of left/right asymmetry' ObjectSomeValueFrom('regulates' 'nodal signaling pathway involved in determination of left/right asymmetry') ) --- !New Class!: http://www.geneontology.org/go#GO_0000485 label: cleavage between 2S rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) + SubClassOf('cleavage between 2S rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)') + SubClassOf('cleavage between 2S rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)')) + SubClassOf('cleavage between 2S rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 2S rRNA')) --- !New Class!: http://www.geneontology.org/go#GO_0051123 label: RNA polymerase II transcriptional preinitiation complex assembly + SubClassOf('RNA polymerase II transcriptional preinitiation complex assembly' 'DNA-dependent transcriptional preinitiation complex assembly') + SubClassOf('RNA polymerase II transcriptional preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0071049 label: nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription + SubClassOf('nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription' ObjectSomeValueFrom('part_of' 'nuclear mRNA surveillance of mRNA 3'-end processing')) --- !New Class!: http://www.geneontology.org/go#GO_0070131 label: positive regulation of mitochondrial translation + SubClassOf('positive regulation of mitochondrial translation' ObjectSomeValueFrom('positively_regulates' 'mitochondrial translation')) + EquivalentClasses('positive regulation of mitochondrial translation' ObjectSomeValueFrom('positively_regulates' 'mitochondrial translation') ) + SubClassOf('positive regulation of mitochondrial translation' 'regulation of mitochondrial translation') + SubClassOf('positive regulation of mitochondrial translation' 'positive regulation of translation') --- !New Class!: http://www.geneontology.org/go#GO_0000352 label: trans assembly of SL-containing precatalytic spliceosome + SubClassOf('trans assembly of SL-containing precatalytic spliceosome' ObjectSomeValueFrom('part_of' 'spliceosomal complex assembly')) + SubClassOf('trans assembly of SL-containing precatalytic spliceosome' ObjectSomeValueFrom('part_of' 'mRNA trans splicing, SL addition')) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_33154 label: Opisthokonta + SubClassOf('Opisthokonta' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#OMIT_0000249 label: IntegumentaryOrgan + SubClassOf('IntegumentaryOrgan' 'AnatomicFeature') --- !New Class!: http://www.geneontology.org/go#OMIT_0000138 label: HamartomaOrMalformation + SubClassOf('HamartomaOrMalformation' 'Neoplasia') --- !New Class!: http://www.geneontology.org/go#GO_0044747 label: mature miRNA 3'-end processing + SubClassOf('mature miRNA 3'-end processing' 'ncRNA 3'-end processing') + SubClassOf('mature miRNA 3'-end processing' ObjectSomeValueFrom('part_of' 'production of miRNAs involved in gene silencing by miRNA')) --- !New Class!: http://www.geneontology.org/go#GO_0000366 label: intergenic mRNA trans splicing + SubClassOf('intergenic mRNA trans splicing' 'mRNA trans splicing, via spliceosome') + SubClassOf('intergenic mRNA trans splicing' 'alternative mRNA splicing, via spliceosome') --- !New Class!: http://www.geneontology.org/go#GO_0001141 label: bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription + SubClassOf('bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' 'bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity') + SubClassOf('bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' 'sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription') --- !New Class!: http://www.geneontology.org/go#GO_0043628 label: ncRNA 3'-end processing + SubClassOf('ncRNA 3'-end processing' 'ncRNA processing') + SubClassOf('ncRNA 3'-end processing' 'RNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000481 label: CellularOrganism + SubClassOf('CellularOrganism' 'Organism') --- !New Class!: http://www.geneontology.org/go#SO_0000329 label: mRNA_with_plus_2_frameshift + SubClassOf('mRNA_with_plus_2_frameshift' 'mRNA_with_frameshift') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_0000436 label: Xenacoelomorpha + SubClassOf('Xenacoelomorpha' 'Deuterostomia') --- !New Class!: http://www.geneontology.org/go#OMIT_0000044 label: Carcinogenicity + SubClassOf('Carcinogenicity' 'ToxicActivity') --- !New Class!: http://www.geneontology.org/go#SO_0000690 label: gene_with_polycistronic_transcript + SubClassOf('gene_with_polycistronic_transcript' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0010424 label: DNA methylation on cytosine within a CG sequence + SubClassOf('DNA methylation on cytosine within a CG sequence' 'DNA methylation on cytosine') --- !New Class!: http://www.geneontology.org/go#GO_0097415 label: cortical Lewy body + SubClassOf('cortical Lewy body' 'Lewy body') --- !New Class!: http://www.geneontology.org/go#OMIT_0000026 label: EnvironmentalVariable + SubClassOf('EnvironmentalVariable' 'quality') --- !New Class!: http://www.geneontology.org/go#GO_0046793 label: induction by virus of modification of host RNA polymerase II + SubClassOf('induction by virus of modification of host RNA polymerase II' 'modulation by virus of host transcription') --- !New Class!: http://www.geneontology.org/go#SO_0001227 label: gene_silenced_by_histone_deacetylation + SubClassOf('gene_silenced_by_histone_deacetylation' 'gene_silenced_by_histone_modification') --- !New Class!: http://www.geneontology.org/go#GO_0060500 label: regulation of transcription from RNA polymerase II promoter involved in lung bud formation + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in lung bud formation' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#span_TemporalRegion label: temporal_region + SubClassOf('temporal_region' 'occurrent') + EquivalentClasses('temporal_region' ObjectUnionOf('connected_temporal_region' 'scattered_temporal_region') ) + DisjointClasses('spatiotemporal_region' 'temporal_region') + DisjointClasses('processual_entity' 'temporal_region') --- !New Class!: http://www.geneontology.org/go#GO_0040033 label: negative regulation of translation, ncRNA-mediated + SubClassOf('negative regulation of translation, ncRNA-mediated' 'negative regulation of translation') + SubClassOf('negative regulation of translation, ncRNA-mediated' 'regulation of translation, ncRNA-mediated') --- !New Class!: http://www.geneontology.org/go#GO_0002097 label: tRNA wobble base modification + SubClassOf('tRNA wobble base modification' 'tRNA modification') --- !New Class!: http://www.geneontology.org/go#GO_0043122 label: regulation of I-kappaB kinase/NF-kappaB cascade + SubClassOf('regulation of I-kappaB kinase/NF-kappaB cascade' ObjectSomeValueFrom('regulates' 'I-kappaB kinase/NF-kappaB cascade')) + EquivalentClasses('regulation of I-kappaB kinase/NF-kappaB cascade' ObjectSomeValueFrom('regulates' 'I-kappaB kinase/NF-kappaB cascade') ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000177 label: PolycythemiaVera + SubClassOf('PolycythemiaVera' 'ChronicMyeloproliferativeDisorders') --- !New Class!: http://www.geneontology.org/go#GO_0046022 label: positive regulation of transcription from RNA polymerase II promoter during mitosis + SubClassOf('positive regulation of transcription from RNA polymerase II promoter during mitosis' 'positive regulation of transcription during mitosis') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter during mitosis' 'regulation of transcription from RNA polymerase II promoter, mitotic') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter during mitosis' 'positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter during mitosis' ) --- !New Class!: http://www.geneontology.org/go#SO_0000388 label: RRE_RNA + SubClassOf('RRE_RNA' 'small_regulatory_ncRNA') --- !New Class!: http://www.geneontology.org/go#GO_0001040 label: RNA polymerase III hybrid type promoter TFIIIB-type transcription factor activity + SubClassOf('RNA polymerase III hybrid type promoter TFIIIB-type transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III hybrid type promoter transcriptional preinitiation complex assembly')) + SubClassOf('RNA polymerase III hybrid type promoter TFIIIB-type transcription factor activity' 'TFIIIB-type transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0019083 label: viral transcription + SubClassOf('viral transcription' ObjectSomeValueFrom('part_of' 'viral genome expression')) --- !New Class!: http://www.geneontology.org/go#SO_0005853 label: gene_cassette + SubClassOf('gene_cassette' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0001008 label: RNA polymerase III type 2 promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity + SubClassOf('RNA polymerase III type 2 promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity' 'RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity') + SubClassOf('RNA polymerase III type 2 promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III type 2 promoter transcriptional preinitiation complex assembly')) --- !New Class!: http://www.geneontology.org/go#GO_0060902 label: regulation of hair cycle by BMP signaling pathway + EquivalentClasses('BMP signaling pathway' 'regulation of hair cycle by BMP signaling pathway' ) + SubClassOf('regulation of hair cycle by BMP signaling pathway' 'BMP signaling pathway') --- !New Class!: http://www.geneontology.org/go#SO_0001062 label: propeptide + SubClassOf('propeptide' 'immature protein part') --- !New Class!: http://www.geneontology.org/go#GO_0001074 label: RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly + SubClassOf('RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'RNA polymerase II transcriptional preinitiation complex assembly')) + SubClassOf('RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly' 'RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0070184 label: mitochondrial tyrosyl-tRNA aminoacylation + SubClassOf('mitochondrial tyrosyl-tRNA aminoacylation' 'tyrosyl-tRNA aminoacylation') + SubClassOf('mitochondrial tyrosyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') + EquivalentClasses('tyrosyl-tRNA aminoacylation' 'mitochondrial tyrosyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0031440 label: regulation of mRNA 3'-end processing + EquivalentClasses('regulation of mRNA 3'-end processing' ObjectSomeValueFrom('regulates' 'mRNA 3'-end processing') ) + SubClassOf('regulation of mRNA 3'-end processing' ObjectSomeValueFrom('regulates' 'mRNA 3'-end processing')) + SubClassOf('regulation of mRNA 3'-end processing' 'regulation of mRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_1990031 label: pinceau fiber + SubClassOf('pinceau fiber' 'axon part') --- !New Class!: http://www.geneontology.org/go#GO_0003743 label: translation initiation factor activity + SubClassOf('translation initiation factor activity' ObjectSomeValueFrom('part_of' 'translational initiation')) + SubClassOf('translation initiation factor activity' 'translation factor activity, nucleic acid binding') --- !New Class!: http://www.geneontology.org/go#GO_0070158 label: mitochondrial seryl-tRNA aminoacylation + EquivalentClasses('seryl-tRNA aminoacylation' 'mitochondrial seryl-tRNA aminoacylation' ) + SubClassOf('mitochondrial seryl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') + SubClassOf('mitochondrial seryl-tRNA aminoacylation' 'seryl-tRNA aminoacylation') --- !New Class!: http://www.geneontology.org/go#GO_0002099 label: tRNA wobble guanine modification + SubClassOf('tRNA wobble guanine modification' 'tRNA wobble base modification') --- !New Class!: http://www.geneontology.org/go#GO_0006361 label: transcription initiation from RNA polymerase I promoter + SubClassOf('transcription initiation from RNA polymerase I promoter' 'DNA-dependent transcription, initiation') + SubClassOf('transcription initiation from RNA polymerase I promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter')) --- !New Class!: http://www.geneontology.org/go#MOD_00237 label: L-beta-methylthioaspartic acid + SubClassOf('L-beta-methylthioaspartic acid' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#OMIT_0000091 label: Virus + SubClassOf('Virus' 'Organism') --- !New Class!: http://www.geneontology.org/go#GO_1900411 label: regulation of histone acetylation by regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of histone acetylation by regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('regulation of histone acetylation by regulation of transcription from RNA polymerase II promoter' 'regulation of histone modification by regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0001514 label: selenocysteine incorporation + SubClassOf('selenocysteine incorporation' 'translational readthrough') --- !New Class!: http://www.geneontology.org/go#SO_0000726 label: repeat_unit + SubClassOf('repeat_unit' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0001077 label: RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription + SubClassOf('RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' 'RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity') + SubClassOf('RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' 'RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription') --- !New Class!: http://www.geneontology.org/go#GO_0051391 label: tRNA acetylation + SubClassOf('tRNA acetylation' 'tRNA modification') --- !New Class!: http://www.geneontology.org/go#GO_0033428 label: CAG codon-amino acid adaptor activity + SubClassOf('CAG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#SO_0000710 label: gene_with_stop_codon_redefined_as_selenocysteine + SubClassOf('gene_with_stop_codon_redefined_as_selenocysteine' 'gene_with_stop_codon_read_through') --- !New Class!: http://www.geneontology.org/go#GO_0090053 label: positive regulation of chromatin silencing at centromere + EquivalentClasses('positive regulation of chromatin silencing at centromere' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing at centromere') ) + SubClassOf('positive regulation of chromatin silencing at centromere' 'regulation of chromatin silencing at centromere') + SubClassOf('positive regulation of chromatin silencing at centromere' 'positive regulation of chromatin silencing') + SubClassOf('positive regulation of chromatin silencing at centromere' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing at centromere')) --- !New Class!: http://www.geneontology.org/go#GO_0097465 label: somatic spine + SubClassOf('somatic spine' 'neuron spine') --- !New Class!: http://www.geneontology.org/go#GO_0072684 label: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic + EquivalentClasses('tRNA 3'-trailer cleavage, endonucleolytic' 'mitochondrial tRNA 3'-trailer cleavage, endonucleolytic' ) + SubClassOf('mitochondrial tRNA 3'-trailer cleavage, endonucleolytic' 'mitochondrial tRNA 3'-end processing') + SubClassOf('mitochondrial tRNA 3'-trailer cleavage, endonucleolytic' 'tRNA 3'-trailer cleavage, endonucleolytic') --- !New Class!: http://www.geneontology.org/go#GO_0044643 label: envenomation resulting in positive regulation of complement activation, alternative pathway in other organism + SubClassOf('envenomation resulting in positive regulation of complement activation, alternative pathway in other organism' 'envenomation resulting in modulation of complement activation, alternative pathway in other organism') + SubClassOf('envenomation resulting in positive regulation of complement activation, alternative pathway in other organism' ObjectSomeValueFrom('has_part' 'positive regulation of complement activation, alternative pathway in other organism')) --- !New Class!: http://www.geneontology.org/go#GO_0033452 label: GUG codon-amino acid adaptor activity + SubClassOf('GUG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#SO_0000667 label: insertion + SubClassOf('insertion' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0034966 label: intronic box H/ACA snoRNA processing + SubClassOf('intronic box H/ACA snoRNA processing' 'box H/ACA snoRNA processing') + SubClassOf('intronic box H/ACA snoRNA processing' 'intronic snoRNA processing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000142 label: DigestiveSystemDisease + SubClassOf('DigestiveSystemDisease' 'OrganSystemDisease') --- !New Class!: http://www.geneontology.org/go#GO_0001121 label: transcription from bacterial-type RNA polymerase promoter + SubClassOf('transcription from bacterial-type RNA polymerase promoter' 'transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0034396 label: negative regulation of transcription from RNA polymerase II promoter in response to iron + SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to iron' 'regulation of transcription from RNA polymerase II promoter in response to iron') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to iron' 'negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_2000142 label: regulation of DNA-dependent transcription, initiation + SubClassOf('regulation of DNA-dependent transcription, initiation' 'regulation of transcription, DNA-dependent') + EquivalentClasses('regulation of DNA-dependent transcription, initiation' ObjectSomeValueFrom('regulates' 'DNA-dependent transcription, initiation') ) + SubClassOf('regulation of DNA-dependent transcription, initiation' ObjectSomeValueFrom('regulates' 'DNA-dependent transcription, initiation')) --- !New Class!: http://www.geneontology.org/go#GO_0072212 label: regulation of transcription from RNA polymerase II promoter involved in metanephros development + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in metanephros development' ) + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in metanephros development' 'regulation of transcription from RNA polymerase II promoter involved in kidney development') --- !New Class!: http://www.geneontology.org/go#GO_0045901 label: positive regulation of translational elongation + SubClassOf('positive regulation of translational elongation' 'positive regulation of translation') + SubClassOf('positive regulation of translational elongation' ObjectSomeValueFrom('positively_regulates' 'translational elongation')) + SubClassOf('positive regulation of translational elongation' 'regulation of translational elongation') + EquivalentClasses('positive regulation of translational elongation' ObjectSomeValueFrom('positively_regulates' 'translational elongation') ) --- !New Class!: http://www.geneontology.org/go#GO_0080149 label: sucrose induced translational repression + SubClassOf('sucrose induced translational repression' 'negative regulation of translation in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_2001126 label: positive regulation of translational frameshifting + EquivalentClasses('positive regulation of translational frameshifting' ObjectSomeValueFrom('positively_regulates' 'translational frameshifting') ) + SubClassOf('positive regulation of translational frameshifting' 'regulation of translational frameshifting') + SubClassOf('positive regulation of translational frameshifting' 'positive regulation of translational elongation') + SubClassOf('positive regulation of translational frameshifting' ObjectSomeValueFrom('positively_regulates' 'translational frameshifting')) --- !New Class!: http://www.geneontology.org/go#GO_0031638 label: zymogen activation + SubClassOf('zymogen activation' 'protein processing') --- !New Class!: http://www.geneontology.org/go#GO_0000468 label: generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) + SubClassOf('generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'rRNA 3'-end processing') + SubClassOf('generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) --- !New Class!: http://www.geneontology.org/go#GO_0000394 label: RNA splicing, via endonucleolytic cleavage and ligation + SubClassOf('RNA splicing, via endonucleolytic cleavage and ligation' 'RNA splicing') --- !New Class!: http://www.geneontology.org/go#GO_0006357 label: regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of thiamine biosynthetic process by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in somitogenesis' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of 4,6-pyruvylated galactose residue biosynthetic process by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in posterior neural plate formation' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of fungal-type cell wall biogenesis by regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription, DNA-dependent') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in heart development' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in spinal cord anterior-posterior patterning' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in venous endothelial cell fate commitment' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in detection of glucose' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of cytokinetic cell separation by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of histone acetylation by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in lymphatic endothelial cell fate commitment' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of iron ion import by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in primary germ layer cell fate commitment' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter involved in endocardial precursor cell differentiation' 'regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in eye field cell fate commitment of camera-type eye' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter, mitotic' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of dipeptide transmembrane transport by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation' 'regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of meiosis by regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter')) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'positive regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of histone modification by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in kidney development' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in cell fate commitment' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of cellular response to oxidative stress by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'negative regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of cAMP-mediated signaling by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in spermatogenesis' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in metanephros development' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in mammary gland formation' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of histone methylation by regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription involved in G1/S transition of mitotic cell cycle' 'regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in mesonephros development' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in anterior neural plate formation' ) + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of glucose import by regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#MOD_00448 label: N-acetylaminoglucosylated residue + SubClassOf('N-acetylaminoglucosylated residue' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_0032922 label: circadian regulation of gene expression + SubClassOf('circadian regulation of gene expression' 'regulation of gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0033421 label: CCU codon-amino acid adaptor activity + SubClassOf('CCU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0006432 label: phenylalanyl-tRNA aminoacylation + EquivalentClasses('phenylalanyl-tRNA aminoacylation' 'mitochondrial phenylalanyl-tRNA aminoacylation' ) + SubClassOf('phenylalanyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- !New Class!: http://www.geneontology.org/go#GO_0046016 label: positive regulation of transcription by glucose + SubClassOf('positive regulation of transcription by glucose' 'carbon catabolite activation of transcription') + SubClassOf('positive regulation of transcription by glucose' 'regulation of transcription by glucose') --- !New Class!: http://www.geneontology.org/go#GO_0000436 label: carbon catabolite activation of transcription from RNA polymerase II promoter + SubClassOf('carbon catabolite activation of transcription from RNA polymerase II promoter' 'carbon catabolite regulation of transcription from RNA polymerase II promoter') + SubClassOf('carbon catabolite activation of transcription from RNA polymerase II promoter' 'carbon catabolite activation of transcription') + SubClassOf('carbon catabolite activation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0071048 label: nuclear retention of unspliced pre-mRNA at the site of transcription + SubClassOf('nuclear retention of unspliced pre-mRNA at the site of transcription' ObjectSomeValueFrom('part_of' 'nuclear mRNA surveillance of spliceosomal pre-mRNA splicing')) --- !New Class!: http://www.geneontology.org/go#GO_0039559 label: suppression by virus of host IRF7 activity by positive regulation of IRF7 catabolic process + SubClassOf('suppression by virus of host IRF7 activity by positive regulation of IRF7 catabolic process' 'suppression by virus of host IRF7 activity') --- !New Class!: http://www.geneontology.org/go#GO_0039524 label: suppression by virus of host mRNA processing + SubClassOf('suppression by virus of host mRNA processing' 'modification by virus of host mRNA processing') + SubClassOf('suppression by virus of host mRNA processing' 'suppression by virus of host gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0043561 label: regulation of translational initiation in response to osmotic stress + SubClassOf('regulation of translational initiation in response to osmotic stress' 'regulation of translational initiation in response to stress') + SubClassOf('regulation of translational initiation in response to osmotic stress' 'regulation of translation in response to osmotic stress') --- !New Class!: http://www.geneontology.org/go#OMIT_0000170 label: AcuteMyelogenousLeukemia + SubClassOf('AcuteMyelogenousLeukemia' 'LeukemiaAndLymphoma') --- !New Class!: http://www.geneontology.org/go#GO_0002943 label: tRNA dihydrouridine synthesis + SubClassOf('tRNA dihydrouridine synthesis' 'tRNA modification') --- !New Class!: http://www.geneontology.org/go#GO_0072097 label: negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway + SubClassOf('negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway' 'BMP signaling pathway') + EquivalentClasses('BMP signaling pathway' 'negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway' ) --- !New Class!: http://www.geneontology.org/go#GO_0090020 label: regulation of transcription involved in posterior neural plate formation + SubClassOf('regulation of transcription involved in posterior neural plate formation' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in posterior neural plate formation' ) --- !New Class!: http://www.geneontology.org/go#GO_0033425 label: CAU codon-amino acid adaptor activity + SubClassOf('CAU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000279 label: LeftAtrium + SubClassOf('LeftAtrium' 'Atria') --- !New Class!: http://www.geneontology.org/go#GO_0000482 label: maturation of 5S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) + SubClassOf('maturation of 5S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'maturation of 5S rRNA') --- !New Class!: http://www.geneontology.org/go#GO_0031442 label: positive regulation of mRNA 3'-end processing + SubClassOf('positive regulation of mRNA 3'-end processing' 'positive regulation of mRNA processing') + SubClassOf('positive regulation of mRNA 3'-end processing' ObjectSomeValueFrom('positively_regulates' 'mRNA 3'-end processing')) + EquivalentClasses('positive regulation of mRNA 3'-end processing' ObjectSomeValueFrom('positively_regulates' 'mRNA 3'-end processing') ) + SubClassOf('positive regulation of mRNA 3'-end processing' 'regulation of mRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#GO_0001185 label: termination of RNA polymerase I transcription from promoter for nuclear large rRNA transcript + SubClassOf('termination of RNA polymerase I transcription from promoter for nuclear large rRNA transcript' 'termination of RNA polymerase I transcription') + SubClassOf('termination of RNA polymerase I transcription from promoter for nuclear large rRNA transcript' ObjectSomeValueFrom('part_of' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000330 label: Thymus + SubClassOf('Thymus' 'LymphaticOrgan') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_3027 label: Cryptophyta + SubClassOf('Cryptophyta' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#GO_0046012 label: positive regulation of oskar mRNA translation + SubClassOf('positive regulation of oskar mRNA translation' 'regulation of oskar mRNA translation') + SubClassOf('positive regulation of oskar mRNA translation' 'positive regulation of translation') --- !New Class!: http://www.geneontology.org/go#SO_0000285 label: foreign_gene + SubClassOf('foreign_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0033445 label: AGU codon-amino acid adaptor activity + SubClassOf('AGU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_1900756 label: protein processing in phagocytic vesicle + SubClassOf('protein processing in phagocytic vesicle' 'protein processing') + EquivalentClasses('protein processing' 'protein processing in phagocytic vesicle' ) --- !New Class!: http://www.geneontology.org/go#GO_0010767 label: regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage + SubClassOf('regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_314293 label: Simiiformes + SubClassOf('Simiiformes' 'Haplorrhini') --- !New Class!: http://www.geneontology.org/go#GO_1900524 label: positive regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0006618 label: SRP-dependent cotranslational protein targeting to membrane, signal sequence processing + SubClassOf('SRP-dependent cotranslational protein targeting to membrane, signal sequence processing' 'signal peptide processing') + SubClassOf('SRP-dependent cotranslational protein targeting to membrane, signal sequence processing' ObjectSomeValueFrom('part_of' 'SRP-dependent cotranslational protein targeting to membrane')) --- !New Class!: http://www.geneontology.org/go#SO_0000409 label: binding_site + SubClassOf('binding_site' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0034227 label: tRNA thio-modification + SubClassOf('tRNA thio-modification' 'tRNA modification') + EquivalentClasses('tRNA thio-modification' 'mitochondrial tRNA thio-modification' ) --- !New Class!: http://www.geneontology.org/go#GO_1900423 label: positive regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0001197 label: positive regulation of mating-type specific transcription from RNA polymerase II promoter + SubClassOf('positive regulation of mating-type specific transcription from RNA polymerase II promoter' 'positive regulation of mating-type specific transcription, DNA-dependent') + SubClassOf('positive regulation of mating-type specific transcription from RNA polymerase II promoter' 'regulation of mating-type specific transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0070928 label: regulation of mRNA stability, ncRNA-mediated + SubClassOf('regulation of mRNA stability, ncRNA-mediated' 'regulation of mRNA stability') --- !New Class!: http://www.geneontology.org/go#GO_0002136 label: wobble base lysidine biosynthesis + SubClassOf('wobble base lysidine biosynthesis' 'tRNA wobble cytosine modification') --- !New Class!: http://www.geneontology.org/go#OMIT_0000302 label: Ileum + SubClassOf('Ileum' 'fiat_object_part') + SubClassOf('Ileum' 'DigestiveOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0004887 label: thyroid hormone receptor activity + SubClassOf('thyroid hormone receptor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_32524 label: Amniota + SubClassOf('Amniota' 'Tetrapoda') --- !New Class!: http://www.geneontology.org/go#OMIT_0000366 label: LowerRespiratoryTract + SubClassOf('LowerRespiratoryTract' 'RespiratoryOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0033431 label: CGA codon-amino acid adaptor activity + SubClassOf('CGA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0070921 label: regulation of production of siRNA involved in chromatin silencing by small RNA + SubClassOf('regulation of production of siRNA involved in chromatin silencing by small RNA' ObjectSomeValueFrom('regulates' 'production of siRNA involved in chromatin silencing by small RNA')) + SubClassOf('regulation of production of siRNA involved in chromatin silencing by small RNA' 'regulation of production of small RNA involved in gene silencing by RNA') + EquivalentClasses('regulation of production of siRNA involved in chromatin silencing by small RNA' ObjectSomeValueFrom('regulates' 'production of siRNA involved in chromatin silencing by small RNA') ) + SubClassOf('regulation of production of siRNA involved in chromatin silencing by small RNA' 'regulation of chromatin silencing by small RNA') --- !New Class!: http://www.geneontology.org/go#SO_0000831 label: gene_member_region + SubClassOf('gene_member_region' 'biological_region') + SubClassOf('gene_member_region' ObjectSomeValueFrom('member_of' 'gene')) --- !New Class!: http://www.geneontology.org/go#GO_0004886 label: 9-cis retinoic acid receptor activity + SubClassOf('9-cis retinoic acid receptor activity' 'retinoic acid receptor activity') --- !New Class!: http://www.geneontology.org/go#GO_1901536 label: negative regulation of DNA demethylation + SubClassOf('negative regulation of DNA demethylation' ObjectSomeValueFrom('negatively_regulates' 'DNA demethylation')) + EquivalentClasses('negative regulation of DNA demethylation' ObjectSomeValueFrom('negatively_regulates' 'DNA demethylation') ) + SubClassOf('negative regulation of DNA demethylation' 'regulation of DNA demethylation') --- !New Class!: http://www.geneontology.org/go#GO_0001130 label: sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity + SubClassOf('sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity' 'sequence-specific DNA binding transcription factor activity') + SubClassOf('sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from bacterial-type RNA polymerase promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0035281 label: pre-miRNA export from nucleus + SubClassOf('pre-miRNA export from nucleus' ObjectSomeValueFrom('part_of' 'gene silencing by miRNA')) --- !New Class!: http://www.geneontology.org/go#GO_0061174 label: type I terminal bouton + SubClassOf('type I terminal bouton' 'terminal bouton') --- !New Class!: http://www.geneontology.org/go#OMIT_0000174 label: MyelodysplasticSyndromes + SubClassOf('MyelodysplasticSyndromes' 'LeukemiaAndLymphoma') --- !New Class!: http://www.geneontology.org/go#GO_0001202 label: copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity + SubClassOf('copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity' 'metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0044628 label: positive regulation of complement activation, classical pathway in other organism + SubClassOf('positive regulation of complement activation, classical pathway in other organism' 'modulation of complement activation, classical pathway in other organism') + SubClassOf('positive regulation of complement activation, classical pathway in other organism' 'positive regulation of complement activation, classical pathway') --- !New Class!: http://www.geneontology.org/go#OMIT_0000062 label: Agranulocyte + SubClassOf('Agranulocyte' 'Leukocyte') --- !New Class!: http://www.geneontology.org/go#GO_0039653 label: suppression by virus of host transcription + SubClassOf('suppression by virus of host transcription' 'modulation by virus of host transcription') + SubClassOf('suppression by virus of host transcription' 'suppression by virus of host gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0045996 label: negative regulation of transcription by pheromones + SubClassOf('negative regulation of transcription by pheromones' 'regulation of transcription by pheromones') + SubClassOf('negative regulation of transcription by pheromones' 'negative regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#OMIT_0000303 label: Jejunum + SubClassOf('Jejunum' 'DigestiveOrgan') + SubClassOf('Jejunum' 'fiat_object_part') --- !New Class!: http://www.geneontology.org/go#OMIT_0000118 label: SignOrSymptom + SubClassOf('SignOrSymptom' 'biological_process') --- !New Class!: http://www.geneontology.org/go#GO_0002108 label: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) + SubClassOf('maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)' 'maturation of LSU-rRNA') --- !New Class!: http://www.geneontology.org/go#GO_0072368 label: regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter' 'regulation of lipid transport by regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase II promoter') ) + SubClassOf('regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0001005 label: RNA polymerase III type 1 promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity + SubClassOf('RNA polymerase III type 1 promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III type 1 promoter transcriptional preinitiation complex assembly')) + SubClassOf('RNA polymerase III type 1 promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity' 'RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0006627 label: protein processing involved in protein targeting to mitochondrion + EquivalentClasses('protein processing involved in protein targeting to mitochondrion' 'protein processing' ) + SubClassOf('protein processing involved in protein targeting to mitochondrion' 'mitochondrial protein processing') --- !New Class!: http://www.geneontology.org/go#GO_0031050 label: dsRNA fragmentation + SubClassOf('dsRNA fragmentation' 'RNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0085033 label: positive regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade + SubClassOf('positive regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade' 'positive regulation of I-kappaB kinase/NF-kappaB cascade') + SubClassOf('positive regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade' 'modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade') --- !New Class!: http://www.geneontology.org/go#GO_0042714 label: dosage compensation complex assembly + SubClassOf('dosage compensation complex assembly' ObjectSomeValueFrom('part_of' 'dosage compensation')) --- !New Class!: http://www.geneontology.org/go#GO_0045291 label: mRNA trans splicing, SL addition + SubClassOf('mRNA trans splicing, SL addition' 'mRNA trans splicing, via spliceosome') --- !New Class!: http://www.geneontology.org/go#GO_0031647 label: regulation of protein stability + SubClassOf('regulation of protein stability' 'posttranscriptional regulation of gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0070156 label: mitochondrial phenylalanyl-tRNA aminoacylation + SubClassOf('mitochondrial phenylalanyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') + SubClassOf('mitochondrial phenylalanyl-tRNA aminoacylation' 'phenylalanyl-tRNA aminoacylation') + EquivalentClasses('phenylalanyl-tRNA aminoacylation' 'mitochondrial phenylalanyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0070920 label: regulation of production of small RNA involved in gene silencing by RNA + SubClassOf('regulation of production of small RNA involved in gene silencing by RNA' 'regulation of gene silencing by RNA') + SubClassOf('regulation of production of small RNA involved in gene silencing by RNA' ObjectSomeValueFrom('regulates' 'production of small RNA involved in gene silencing by RNA')) + SubClassOf('regulation of production of small RNA involved in gene silencing by RNA' 'regulation of gene expression') + EquivalentClasses('regulation of production of small RNA involved in gene silencing by RNA' ObjectSomeValueFrom('regulates' 'production of small RNA involved in gene silencing by RNA') ) --- !New Class!: http://www.geneontology.org/go#GO_0090079 label: translation regulator activity, nucleic acid binding + SubClassOf('translation regulator activity, nucleic acid binding' 'translation regulator activity') --- !New Class!: http://www.geneontology.org/go#GO_0010267 label: production of ta-siRNAs involved in RNA interference + SubClassOf('production of ta-siRNAs involved in RNA interference' 'production of siRNA involved in RNA interference') --- !New Class!: http://www.geneontology.org/go#GO_0021913 label: regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification' ) + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification' 'regulation of transcription involved in cell fate commitment') --- !New Class!: http://www.geneontology.org/go#GO_0033447 label: AGA codon-amino acid adaptor activity + SubClassOf('AGA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0000354 label: cis assembly of pre-catalytic spliceosome + SubClassOf('cis assembly of pre-catalytic spliceosome' ObjectSomeValueFrom('part_of' 'mRNA cis splicing, via spliceosome')) + SubClassOf('cis assembly of pre-catalytic spliceosome' ObjectSomeValueFrom('part_of' 'spliceosomal complex assembly')) --- !New Class!: http://www.geneontology.org/go#GO_0071212 label: subsynaptic reticulum + SubClassOf('subsynaptic reticulum' 'axon part') + SubClassOf('subsynaptic reticulum' ObjectSomeValueFrom('part_of' 'type I terminal bouton')) --- !New Class!: http://www.geneontology.org/go#SO_0001263 label: ncRNA_gene + SubClassOf('ncRNA_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0000971 label: tRNA exon ligation utilizing 2',3' cyclic phosphate of 5'-exon as source of linkage phosphate + SubClassOf('tRNA exon ligation utilizing 2',3' cyclic phosphate of 5'-exon as source of linkage phosphate' 'tRNA exon ligation') --- !New Class!: http://www.geneontology.org/go#GO_1900387 label: negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter + SubClassOf('negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0045948 label: positive regulation of translational initiation + EquivalentClasses('positive regulation of translational initiation' ObjectSomeValueFrom('positively_regulates' 'translational initiation') ) + SubClassOf('positive regulation of translational initiation' ObjectSomeValueFrom('positively_regulates' 'translational initiation')) + SubClassOf('positive regulation of translational initiation' 'positive regulation of translation') + SubClassOf('positive regulation of translational initiation' 'regulation of translational initiation') --- !New Class!: http://www.geneontology.org/go#OMIT_0000075 label: Neuron + SubClassOf('Neuron' 'NerveTissueCell') --- !New Class!: http://www.geneontology.org/go#GO_0060149 label: negative regulation of posttranscriptional gene silencing + SubClassOf('negative regulation of posttranscriptional gene silencing' 'negative regulation of gene silencing') + SubClassOf('negative regulation of posttranscriptional gene silencing' 'regulation of posttranscriptional gene silencing') + EquivalentClasses('negative regulation of posttranscriptional gene silencing' ObjectSomeValueFrom('negatively_regulates' 'posttranscriptional gene silencing') ) + SubClassOf('negative regulation of posttranscriptional gene silencing' ObjectSomeValueFrom('negatively_regulates' 'posttranscriptional gene silencing')) --- !New Class!: http://www.geneontology.org/go#GO_0070185 label: mitochondrial valyl-tRNA aminoacylation + EquivalentClasses('valyl-tRNA aminoacylation' 'mitochondrial valyl-tRNA aminoacylation' ) + SubClassOf('mitochondrial valyl-tRNA aminoacylation' 'valyl-tRNA aminoacylation') + SubClassOf('mitochondrial valyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') --- !New Class!: http://www.geneontology.org/go#GO_0030423 label: targeting of mRNA for destruction involved in RNA interference + SubClassOf('targeting of mRNA for destruction involved in RNA interference' ObjectSomeValueFrom('part_of' 'RNA interference')) --- !New Class!: http://www.geneontology.org/go#GO_0000451 label: rRNA 2'-O-methylation + SubClassOf('rRNA 2'-O-methylation' 'rRNA methylation') --- !New Class!: http://www.geneontology.org/go#GO_0001170 label: RNA polymerase I enhancer sequence-specific DNA binding transcription factor activity + SubClassOf('RNA polymerase I enhancer sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding RNA polymerase I transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0002161 label: aminoacyl-tRNA editing activity + SubClassOf('aminoacyl-tRNA editing activity' ObjectSomeValueFrom('part_of' 'regulation of translational fidelity')) --- !New Class!: http://www.geneontology.org/go#GO_0019085 label: immediate early viral mRNA transcription + SubClassOf('immediate early viral mRNA transcription' 'mRNA transcription') + SubClassOf('immediate early viral mRNA transcription' 'viral transcription') --- !New Class!: http://www.geneontology.org/go#GO_0002926 label: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis. + SubClassOf('tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis.' 'tRNA wobble uridine modification') --- !New Class!: http://www.geneontology.org/go#GO_0044631 label: positive regulation of complement activation, lectin pathway in other organism + SubClassOf('positive regulation of complement activation, lectin pathway in other organism' 'modulation of complement activation, lectin pathway in other organism') + SubClassOf('positive regulation of complement activation, lectin pathway in other organism' 'positive regulation of complement activation, lectin pathway') --- !New Class!: http://www.geneontology.org/go#GO_0060211 label: regulation of nuclear-transcribed mRNA poly(A) tail shortening + SubClassOf('regulation of nuclear-transcribed mRNA poly(A) tail shortening' ObjectSomeValueFrom('regulates' 'nuclear-transcribed mRNA poly(A) tail shortening')) + SubClassOf('regulation of nuclear-transcribed mRNA poly(A) tail shortening' 'regulation of mRNA 3'-end processing') + EquivalentClasses('regulation of nuclear-transcribed mRNA poly(A) tail shortening' ObjectSomeValueFrom('regulates' 'nuclear-transcribed mRNA poly(A) tail shortening') ) --- !New Class!: http://www.geneontology.org/go#SO_0000610 label: polyA_sequence + SubClassOf('polyA_sequence' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0001750 label: photoreceptor outer segment + SubClassOf('photoreceptor outer segment' 'neuron part') --- !New Class!: http://www.geneontology.org/go#OMIT_0000035 label: NormalTemperature + SubClassOf('NormalTemperature' 'Temperature') --- !New Class!: http://www.geneontology.org/go#GO_0045892 label: negative regulation of transcription, DNA-dependent + SubClassOf('negative regulation of transcription, DNA-dependent' 'negative regulation of gene expression') + SubClassOf('negative regulation of transcription, DNA-dependent' ObjectSomeValueFrom('negatively_regulates' 'transcription, DNA-dependent')) + SubClassOf('negative regulation of transcription, DNA-dependent' 'regulation of transcription, DNA-dependent') + EquivalentClasses('negative regulation of transcription, DNA-dependent' 'negative regulation of transcription involved in G2/M transition of mitotic cell cycle' ) + EquivalentClasses('negative regulation of transcription, DNA-dependent' ObjectSomeValueFrom('negatively_regulates' 'transcription, DNA-dependent') ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000171 label: ChronicMyeloproliferativeDisorders + SubClassOf('ChronicMyeloproliferativeDisorders' 'LeukemiaAndLymphoma') --- !New Class!: http://www.geneontology.org/go#GO_0007074 label: positive regulation of transcription on exit from mitosis, from RNA polymerase II promoter + SubClassOf('positive regulation of transcription on exit from mitosis, from RNA polymerase II promoter' 'positive regulation of transcription on exit from mitosis') --- !New Class!: http://www.geneontology.org/go#GO_2000234 label: positive regulation of rRNA processing + SubClassOf('positive regulation of rRNA processing' ObjectSomeValueFrom('positively_regulates' 'rRNA processing')) + SubClassOf('positive regulation of rRNA processing' 'regulation of rRNA processing') + EquivalentClasses('positive regulation of rRNA processing' ObjectSomeValueFrom('positively_regulates' 'rRNA processing') ) --- !New Class!: http://www.geneontology.org/go#GO_0036251 label: positive regulation of transcription from RNA polymerase II promoter in response to salt stress + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to salt stress' 'positive regulation of transcription from RNA polymerase II promoter in response to osmotic stress') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to salt stress' 'regulation of transcription from RNA polymerase II promoter in response to salt stress') --- !New Class!: http://www.geneontology.org/go#GO_0036095 label: positive regulation of invasive growth in response to glucose limitation by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of invasive growth in response to glucose limitation by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of invasive growth in response to glucose limitation by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'regulation of transcription from RNA polymerase II promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_0004809 label: tRNA (guanine-N2-)-methyltransferase activity + SubClassOf('tRNA (guanine-N2-)-methyltransferase activity' 'tRNA (guanine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0033453 label: GCU codon-amino acid adaptor activity + SubClassOf('GCU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0061418 label: regulation of transcription from RNA polymerase II promoter in response to hypoxia + SubClassOf('regulation of transcription from RNA polymerase II promoter in response to hypoxia' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0035961 label: positive regulation of ergosterol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of ergosterol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of ergosterol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) + SubClassOf('positive regulation of ergosterol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#SO_0000704 label: gene + SubClassOf('gene' 'biological_region') + SubClassOf('gene' ObjectSomeValueFrom('involvedInTumor' 'Tumor')) --- !New Class!: http://www.geneontology.org/go#GO_0016430 label: tRNA (adenine-N6-)-methyltransferase activity + SubClassOf('tRNA (adenine-N6-)-methyltransferase activity' 'tRNA (adenine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0016486 label: peptide hormone processing + SubClassOf('peptide hormone processing' 'protein processing') --- !New Class!: http://www.geneontology.org/go#SO_0000288 label: engineered_fusion_gene + SubClassOf('engineered_fusion_gene' 'fusion_gene') + SubClassOf('engineered_fusion_gene' 'engineered_gene') --- !New Class!: http://www.geneontology.org/go#GO_0060148 label: positive regulation of posttranscriptional gene silencing + SubClassOf('positive regulation of posttranscriptional gene silencing' 'regulation of posttranscriptional gene silencing') + EquivalentClasses('positive regulation of posttranscriptional gene silencing' ObjectSomeValueFrom('positively_regulates' 'posttranscriptional gene silencing') ) + SubClassOf('positive regulation of posttranscriptional gene silencing' ObjectSomeValueFrom('positively_regulates' 'posttranscriptional gene silencing')) --- !New Class!: http://www.geneontology.org/go#SO_0000018 label: linkage_group + SubClassOf('linkage_group' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0052735 label: tRNA (cytosine-3-)-methyltransferase activity + SubClassOf('tRNA (cytosine-3-)-methyltransferase activity' 'tRNA (cytosine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0048255 label: mRNA stabilization + SubClassOf('mRNA stabilization' 'regulation of mRNA stability') + SubClassOf('mRNA stabilization' 'RNA stabilization') --- !New Class!: http://www.geneontology.org/go#GO_0001183 label: transcription elongation from RNA polymerase I promoter for nuclear large rRNA transcript + SubClassOf('transcription elongation from RNA polymerase I promoter for nuclear large rRNA transcript' ObjectSomeValueFrom('part_of' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter')) + SubClassOf('transcription elongation from RNA polymerase I promoter for nuclear large rRNA transcript' 'transcription elongation from RNA polymerase I promoter') --- !New Class!: http://www.geneontology.org/go#GO_0001211 label: copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription + SubClassOf('copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription' 'metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription') + SubClassOf('copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription' 'copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000335 label: SkeletalMuscles + SubClassOf('SkeletalMuscles' 'MusculoskeletalOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0051719 label: DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates + SubClassOf('DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates' 'DNA (cytosine-5-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#MOD_01152 label: carboxylated residue + SubClassOf('carboxylated residue' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#OMIT_0000031 label: LowPressure + SubClassOf('LowPressure' 'Pressure') --- !New Class!: http://www.geneontology.org/go#SO_0001217 label: protein_coding_gene + SubClassOf('protein_coding_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0090055 label: positive regulation of chromatin silencing at silent mating-type cassette + SubClassOf('positive regulation of chromatin silencing at silent mating-type cassette' 'positive regulation of chromatin silencing') + SubClassOf('positive regulation of chromatin silencing at silent mating-type cassette' 'regulation of chromatin silencing at silent mating-type cassette') + EquivalentClasses('positive regulation of chromatin silencing at silent mating-type cassette' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing at silent mating-type cassette') ) + SubClassOf('positive regulation of chromatin silencing at silent mating-type cassette' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing at silent mating-type cassette')) --- !New Class!: http://www.geneontology.org/go#GO_0000483 label: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) + SubClassOf('endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' 'endonucleolytic cleavage involved in rRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0070321 label: regulation of translation in response to nitrogen starvation + SubClassOf('regulation of translation in response to nitrogen starvation' 'regulation of translation in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0043433 label: negative regulation of sequence-specific DNA binding transcription factor activity + SubClassOf('negative regulation of sequence-specific DNA binding transcription factor activity' 'regulation of sequence-specific DNA binding transcription factor activity') + SubClassOf('negative regulation of sequence-specific DNA binding transcription factor activity' ObjectSomeValueFrom('negatively_regulates' 'sequence-specific DNA binding transcription factor activity')) + EquivalentClasses('negative regulation of sequence-specific DNA binding transcription factor activity' ObjectSomeValueFrom('negatively_regulates' 'sequence-specific DNA binding transcription factor activity') ) --- !New Class!: http://www.geneontology.org/go#GO_0031054 label: pre-miRNA processing + SubClassOf('pre-miRNA processing' 'ncRNA processing') + SubClassOf('pre-miRNA processing' ObjectSomeValueFrom('part_of' 'production of miRNAs involved in gene silencing by miRNA')) --- !New Class!: http://www.geneontology.org/go#GO_0010674 label: negative regulation of transcription from RNA polymerase II promoter during meiosis + SubClassOf('negative regulation of transcription from RNA polymerase II promoter during meiosis' 'regulation of transcription from RNA polymerase II promoter during meiosis') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter during meiosis' 'negative regulation of transcription during meiosis') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter during meiosis' 'negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0032839 label: dendrite cytoplasm + SubClassOf('dendrite cytoplasm' ObjectSomeValueFrom('part_of' 'dendrite')) + SubClassOf('dendrite cytoplasm' 'neuron part') --- !New Class!: http://www.geneontology.org/go#OMIT_0000043 label: ToxicActivity + SubClassOf('ToxicActivity' 'HarmfulRole') --- !New Class!: http://www.geneontology.org/go#SO_0001671 label: bacterial_RNApol_promoter_sigma_70 + SubClassOf('bacterial_RNApol_promoter_sigma_70' 'bacterial_RNApol_promoter') --- !New Class!: http://www.geneontology.org/go#GO_2000749 label: positive regulation of chromatin silencing at rDNA + SubClassOf('positive regulation of chromatin silencing at rDNA' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing at rDNA')) + SubClassOf('positive regulation of chromatin silencing at rDNA' 'positive regulation of chromatin silencing') + EquivalentClasses('positive regulation of chromatin silencing at rDNA' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing at rDNA') ) + SubClassOf('positive regulation of chromatin silencing at rDNA' 'regulation of chromatin silencing at rDNA') --- !New Class!: http://www.geneontology.org/go#GO_0016180 label: snRNA processing + SubClassOf('snRNA processing' 'ncRNA processing') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_9347 label: Eutheria + SubClassOf('Eutheria' 'Theria') --- !New Class!: http://www.geneontology.org/go#GO_2000223 label: regulation of BMP signaling pathway involved in heart jogging + SubClassOf('regulation of BMP signaling pathway involved in heart jogging' 'regulation of BMP signaling pathway') + SubClassOf('regulation of BMP signaling pathway involved in heart jogging' ObjectSomeValueFrom('regulates' 'BMP signaling pathway involved in heart jogging')) + EquivalentClasses('regulation of BMP signaling pathway involved in heart jogging' ObjectSomeValueFrom('regulates' 'BMP signaling pathway involved in heart jogging') ) --- !New Class!: http://www.geneontology.org/go#GO_0032775 label: DNA methylation on adenine + SubClassOf('DNA methylation on adenine' 'DNA methylation') --- !New Class!: http://www.geneontology.org/go#GO_0021912 label: regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification' 'regulation of transcription involved in cell fate commitment') --- !New Class!: http://www.geneontology.org/go#GO_0043558 label: regulation of translational initiation in response to stress + SubClassOf('regulation of translational initiation in response to stress' 'regulation of translational initiation') + SubClassOf('regulation of translational initiation in response to stress' 'regulation of translation in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0045994 label: positive regulation of translational initiation by iron + SubClassOf('positive regulation of translational initiation by iron' 'positive regulation of translational initiation') + SubClassOf('positive regulation of translational initiation by iron' 'regulation of translational initiation by iron') --- !New Class!: http://www.geneontology.org/go#SO_0000721 label: gene_with_dicistronic_primary_transcript + SubClassOf('gene_with_dicistronic_primary_transcript' 'gene_with_dicistronic_transcript') --- !New Class!: http://www.geneontology.org/go#OMIT_0000203 label: Carcinoma + SubClassOf('Carcinoma' 'MalignantNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0006990 label: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response + SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response' 'positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus') + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response' 'positive regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0000435 label: positive regulation of transcription from RNA polymerase II promoter by galactose + SubClassOf('positive regulation of transcription from RNA polymerase II promoter by galactose' 'positive regulation of transcription by galactose') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter by galactose' 'carbon catabolite activation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter by galactose' 'regulation of transcription from RNA polymerase II promoter by galactose') --- !New Class!: http://www.geneontology.org/go#GO_0070897 label: DNA-dependent transcriptional preinitiation complex assembly + SubClassOf('DNA-dependent transcriptional preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'DNA-dependent transcription, initiation')) --- !New Class!: http://www.geneontology.org/go#GO_0001111 label: promoter clearance from RNA polymerase II promoter + SubClassOf('promoter clearance from RNA polymerase II promoter' 'promoter clearance during DNA-dependent transcription') + SubClassOf('promoter clearance from RNA polymerase II promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#GO_2000638 label: regulation of SREBP signaling pathway + EquivalentClasses('regulation of SREBP signaling pathway' ObjectSomeValueFrom('regulates' 'SREBP signaling pathway') ) + SubClassOf('regulation of SREBP signaling pathway' ObjectSomeValueFrom('regulates' 'SREBP signaling pathway')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000134 label: Fungallnfection + SubClassOf('Fungallnfection' 'Infection') --- !New Class!: http://www.geneontology.org/go#GO_0030673 label: axolemma + SubClassOf('axolemma' 'axon part') + SubClassOf('axolemma' ObjectSomeValueFrom('part_of' 'main axon')) + SubClassOf('axolemma' 'neuron projection membrane') --- !New Class!: http://www.geneontology.org/go#OMIT_0000355 label: Ovaries + SubClassOf('Ovaries' 'FemaleReproductiveSystem') --- !New Class!: http://www.geneontology.org/go#GO_1901643 label: regulation of tRNA methylation in response to nitrogen starvation + SubClassOf('regulation of tRNA methylation in response to nitrogen starvation' 'regulation of tRNA processing') + EquivalentClasses('regulation of tRNA methylation in response to nitrogen starvation' ObjectSomeValueFrom('regulates' 'tRNA methylation in response to nitrogen starvation') ) + SubClassOf('regulation of tRNA methylation in response to nitrogen starvation' ObjectSomeValueFrom('regulates' 'tRNA methylation in response to nitrogen starvation')) --- !New Class!: http://www.geneontology.org/go#GO_0034472 label: snRNA 3'-end processing + SubClassOf('snRNA 3'-end processing' 'ncRNA 3'-end processing') + SubClassOf('snRNA 3'-end processing' 'snRNA processing') --- !New Class!: http://www.geneontology.org/go#bfo_Entity label: entity --- !New Class!: http://www.geneontology.org/go#GO_0045974 label: regulation of translation, ncRNA-mediated + SubClassOf('regulation of translation, ncRNA-mediated' 'regulation of translation') --- !New Class!: http://www.geneontology.org/go#GO_0071598 label: neuronal ribonucleoprotein granule + SubClassOf('neuronal ribonucleoprotein granule' 'neuron part') + SubClassOf('neuronal ribonucleoprotein granule' ObjectSomeValueFrom('part_of' 'neuron projection')) --- !New Class!: http://www.geneontology.org/go#GO_0021882 label: regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment' 'regulation of transcription involved in cell fate commitment') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment' ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000140 label: Tumor + SubClassOf('Tumor' 'Neoplasia') --- !New Class!: http://www.geneontology.org/go#GO_0061419 label: positive regulation of transcription from RNA polymerase II promoter in response to hypoxia + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to hypoxia' 'regulation of transcription from RNA polymerase II promoter in response to hypoxia') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to hypoxia' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_1900466 label: positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0070157 label: mitochondrial prolyl-tRNA aminoacylation + SubClassOf('mitochondrial prolyl-tRNA aminoacylation' 'prolyl-tRNA aminoacylation') + SubClassOf('mitochondrial prolyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') + EquivalentClasses('prolyl-tRNA aminoacylation' 'mitochondrial prolyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000334 label: Ligaments + SubClassOf('Ligaments' 'MusculoskeletalOrgan') --- !New Class!: http://www.geneontology.org/go#SO_0000839 label: polypeptide_region + SubClassOf('polypeptide_region' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0033464 label: GGG codon-amino acid adaptor activity + SubClassOf('GGG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_1901488 label: positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process + SubClassOf('positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process' 'positive regulation of SREBP signaling pathway') + EquivalentClasses('positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process' ObjectSomeValueFrom('results_in' 'positive regulation of SREBP signaling pathway') ) --- !New Class!: http://www.geneontology.org/go#GO_0034415 label: tRNA 3'-trailer cleavage, exonucleolytic + SubClassOf('tRNA 3'-trailer cleavage, exonucleolytic' 'tRNA 3'-trailer cleavage') --- !New Class!: http://www.geneontology.org/go#GO_0042795 label: snRNA transcription from RNA polymerase II promoter + SubClassOf('snRNA transcription from RNA polymerase II promoter' 'snRNA transcription') + SubClassOf('snRNA transcription from RNA polymerase II promoter' 'transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0001174 label: transcriptional start site selection at RNA polymerase II promoter + SubClassOf('transcriptional start site selection at RNA polymerase II promoter' 'DNA-dependent transcriptional start site selection') + SubClassOf('transcriptional start site selection at RNA polymerase II promoter' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000192 label: ExtranodalMarginalZoneLymphoma + SubClassOf('ExtranodalMarginalZoneLymphoma' 'MatureBCellNeoplasm') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_10229 label: Chaetognatha + SubClassOf('Chaetognatha' 'Deuterostomia') --- !New Class!: http://www.geneontology.org/go#GO_0030070 label: insulin processing + SubClassOf('insulin processing' 'peptide hormone processing') --- !New Class!: http://www.geneontology.org/go#GO_0033422 label: CCC codon-amino acid adaptor activity + SubClassOf('CCC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#SO_0000418 label: signal_peptide + SubClassOf('signal_peptide' 'immature protein part') --- !New Class!: http://www.geneontology.org/go#GO_0006392 label: transcription elongation from mitochondrial promoter + SubClassOf('transcription elongation from mitochondrial promoter' ObjectSomeValueFrom('part_of' 'transcription from mitochondrial promoter')) + SubClassOf('transcription elongation from mitochondrial promoter' 'DNA-dependent transcription, elongation') --- !New Class!: http://www.geneontology.org/go#GO_0061415 label: negative regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source + SubClassOf('negative regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source' 'regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source' 'carbon catabolite repression of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_1901227 label: negative regulation of transcription from RNA polymerase II promoter involved in heart development + SubClassOf('negative regulation of transcription from RNA polymerase II promoter involved in heart development' 'regulation of transcription from RNA polymerase II promoter involved in heart development') + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter involved in heart development' ) + SubClassOf('negative regulation of transcription from RNA polymerase II promoter involved in heart development' 'negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0006448 label: regulation of translational elongation + EquivalentClasses('regulation of translational elongation' ObjectSomeValueFrom('regulates' 'translational elongation') ) + SubClassOf('regulation of translational elongation' ObjectSomeValueFrom('regulates' 'translational elongation')) + SubClassOf('regulation of translational elongation' 'regulation of translation') --- !New Class!: http://www.geneontology.org/go#GO_0000995 label: core RNA polymerase III binding transcription factor activity + SubClassOf('core RNA polymerase III binding transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0042790 label: transcription of nuclear large rRNA transcript from RNA polymerase I promoter + SubClassOf('transcription of nuclear large rRNA transcript from RNA polymerase I promoter' 'rRNA transcription') + SubClassOf('transcription of nuclear large rRNA transcript from RNA polymerase I promoter' 'transcription from RNA polymerase I promoter') --- !New Class!: http://www.geneontology.org/go#GO_0071587 label: CAAX-box protein modification + SubClassOf('CAAX-box protein modification' ObjectSomeValueFrom('part_of' 'CAAX-box protein maturation')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000157 label: PleuralSolitaryFibrousTumor + SubClassOf('PleuralSolitaryFibrousTumor' 'ConnectiveOrigin') --- !New Class!: http://www.geneontology.org/go#GO_0000965 label: mitochondrial RNA 3'-end processing + EquivalentClasses('mitochondrial RNA 3'-end processing' 'RNA 3'-end processing' ) + SubClassOf('mitochondrial RNA 3'-end processing' 'RNA 3'-end processing') + SubClassOf('mitochondrial RNA 3'-end processing' 'mitochondrial RNA processing') --- !New Class!: http://www.geneontology.org/go#GO_1900382 label: regulation of thiamine biosynthetic process by regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of thiamine biosynthetic process by regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('regulation of thiamine biosynthetic process by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0001308 label: negative regulation of chromatin silencing involved in replicative cell aging + EquivalentClasses('negative regulation of chromatin silencing involved in replicative cell aging' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing') ) + SubClassOf('negative regulation of chromatin silencing involved in replicative cell aging' 'negative regulation of chromatin silencing') --- !New Class!: http://www.geneontology.org/go#SO_0000725 label: transit_peptide + SubClassOf('transit_peptide' 'immature protein part') --- !New Class!: http://www.geneontology.org/go#GO_0044635 label: positive regulation of complement activation, alternative pathway in other organism + SubClassOf('positive regulation of complement activation, alternative pathway in other organism' 'positive regulation of complement activation, alternative pathway') + SubClassOf('positive regulation of complement activation, alternative pathway in other organism' 'modulation of complement activation, alternative pathway in other organism') --- !New Class!: http://www.geneontology.org/go#GO_0033562 label: co-transcriptional gene silencing by RNA interference machinery + SubClassOf('co-transcriptional gene silencing by RNA interference machinery' 'gene silencing by RNA') --- !New Class!: http://www.geneontology.org/go#GO_0070037 label: rRNA (pseudouridine) methyltransferase activity + SubClassOf('rRNA (pseudouridine) methyltransferase activity' 'rRNA methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0035279 label: mRNA cleavage involved in gene silencing by miRNA + EquivalentClasses('mRNA cleavage involved in gene silencing by miRNA' ObjectIntersectionOf('mRNA cleavage' ObjectSomeValueFrom('part_of' 'gene silencing by miRNA')) ) + SubClassOf('mRNA cleavage involved in gene silencing by miRNA' 'mRNA cleavage') + SubClassOf('mRNA cleavage involved in gene silencing by miRNA' ObjectSomeValueFrom('part_of' 'gene silencing by miRNA')) --- !New Class!: http://www.geneontology.org/go#SO_0000581 label: cap + SubClassOf('cap' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0001125 label: transcription termination from bacterial-type RNA polymerase promoter + SubClassOf('transcription termination from bacterial-type RNA polymerase promoter' ObjectSomeValueFrom('part_of' 'transcription from bacterial-type RNA polymerase promoter')) + SubClassOf('transcription termination from bacterial-type RNA polymerase promoter' 'DNA-dependent transcription, termination') --- !New Class!: http://www.geneontology.org/go#GO_0001677 label: formation of translation initiation ternary complex + SubClassOf('formation of translation initiation ternary complex' ObjectSomeValueFrom('part_of' 'translational initiation')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000376 label: Ureter + SubClassOf('Ureter' 'UrinaryOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0001870 label: positive regulation of complement activation, lectin pathway + SubClassOf('positive regulation of complement activation, lectin pathway' 'regulation of complement activation, lectin pathway') + SubClassOf('positive regulation of complement activation, lectin pathway' 'positive regulation of complement activation') --- !New Class!: http://www.geneontology.org/go#GO_0046019 label: regulation of transcription from RNA polymerase II promoter by pheromones + SubClassOf('regulation of transcription from RNA polymerase II promoter by pheromones' 'regulation of transcription from RNA polymerase II promoter') + SubClassOf('regulation of transcription from RNA polymerase II promoter by pheromones' 'regulation of transcription by pheromones') --- !New Class!: http://www.geneontology.org/go#GO_0046017 label: regulation of transcription from RNA polymerase I promoter, mitotic + SubClassOf('regulation of transcription from RNA polymerase I promoter, mitotic' 'regulation of transcription during mitosis') + EquivalentClasses('regulation of transcription from RNA polymerase I promoter' 'regulation of transcription from RNA polymerase I promoter, mitotic' ) + SubClassOf('regulation of transcription from RNA polymerase I promoter, mitotic' 'regulation of transcription from RNA polymerase I promoter') --- !New Class!: http://www.geneontology.org/go#GO_0061405 label: positive regulation of transcription from RNA polymerase II promoter in response to hydrostatic pressure + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to hydrostatic pressure' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#SO_0000634 label: polycistronic_mRNA + SubClassOf('polycistronic_mRNA' 'mRNA') --- !New Class!: http://www.geneontology.org/go#snap_ObjectBoundary label: object_boundary + DisjointClasses('fiat_object_part' 'object_boundary') + DisjointClasses('object' 'object'Boundary) + DisjointClasses('material_entity' 'object_boundary') + DisjointClasses('object_boundary' 'site') + SubClassOf('object_boundary' 'independent_continuant') + DisjointClasses('object_aggregate' 'object_boundary') --- !New Class!: http://www.geneontology.org/go#GO_0003130 label: BMP signaling pathway involved in heart induction + SubClassOf('BMP signaling pathway involved in heart induction' 'regulation of transcription involved in cell fate commitment') + SubClassOf('BMP signaling pathway involved in heart induction' 'BMP signaling pathway involved in heart development') + EquivalentClasses('BMP signaling pathway involved in heart induction' 'BMP signaling pathway' ) --- !New Class!: http://www.geneontology.org/go#GO_0002330 label: pre-B cell receptor expression + SubClassOf('pre-B cell receptor expression' 'gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0002927 label: archaeosine-tRNA biosynthetic process + SubClassOf('archaeosine-tRNA biosynthetic process' 'tRNA modification') --- !New Class!: http://www.geneontology.org/go#GO_0051604 label: protein maturation + SubClassOf('protein maturation' ObjectSomeValueFrom('part_of' 'gene expression')) --- !New Class!: http://www.geneontology.org/go#GO_0033420 label: CUG codon-amino acid adaptor activity + SubClassOf('CUG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0045957 label: negative regulation of complement activation, alternative pathway + SubClassOf('negative regulation of complement activation, alternative pathway' 'negative regulation of complement activation') + SubClassOf('negative regulation of complement activation, alternative pathway' 'regulation of complement activation, alternative pathway') --- !New Class!: http://www.geneontology.org/go#GO_0010735 label: positive regulation of transcription via serum response element binding + SubClassOf('positive regulation of transcription via serum response element binding' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_1901222 label: regulation of NIK/NF-kappaB cascade + EquivalentClasses('regulation of NIK/NF-kappaB cascade' ObjectSomeValueFrom('regulates' 'NIK/NF-kappaB cascade') ) + SubClassOf('regulation of NIK/NF-kappaB cascade' ObjectSomeValueFrom('regulates' 'NIK/NF-kappaB cascade')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000257 label: Heart + SubClassOf('Heart' 'CardiovascularFeature') --- !New Class!: http://www.geneontology.org/go#GO_0045900 label: negative regulation of translational elongation + SubClassOf('negative regulation of translational elongation' 'regulation of translational elongation') + EquivalentClasses('negative regulation of translational elongation' ObjectSomeValueFrom('negatively_regulates' 'translational elongation') ) + SubClassOf('negative regulation of translational elongation' 'negative regulation of translation') + SubClassOf('negative regulation of translational elongation' ObjectSomeValueFrom('negatively_regulates' 'translational elongation')) --- !New Class!: http://www.geneontology.org/go#GO_0045903 label: positive regulation of translational fidelity + SubClassOf('positive regulation of translational fidelity' 'positive regulation of translation') + SubClassOf('positive regulation of translational fidelity' 'regulation of translational fidelity') --- !New Class!: http://www.geneontology.org/go#GO_1990037 label: Lewy body core + SubClassOf('Lewy body core' ObjectSomeValueFrom('part_of' 'Lewy body')) + SubClassOf('Lewy body core' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0043488 label: regulation of mRNA stability + SubClassOf('regulation of mRNA stability' 'regulation of RNA stability') + EquivalentClasses('regulation of mRNA stability involved in response to stress' 'regulation of mRNA stability' ) + EquivalentClasses('regulation of mRNA stability' 'regulation of mRNA stability involved in response to oxidative stress' ) --- !New Class!: http://www.geneontology.org/go#GO_0002128 label: tRNA nucleoside ribose methylation + SubClassOf('tRNA nucleoside ribose methylation' 'tRNA methylation') --- !New Class!: http://www.geneontology.org/go#MOD_00128 label: N6-pyridoxal phosphate-L-lysine + SubClassOf('N6-pyridoxal phosphate-L-lysine' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#OMIT_0000168 label: Hemangioendothelioma + SubClassOf('Hemangioendothelioma' 'IntermediateGradeNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0039656 label: modulation by virus of host gene expression + SubClassOf('modulation by virus of host gene expression' 'regulation of gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0046018 label: positive regulation of transcription from RNA polymerase I promoter during mitosis + EquivalentClasses('positive regulation of transcription from RNA polymerase I promoter' 'positive regulation of transcription from RNA polymerase I promoter during mitosis' ) + SubClassOf('positive regulation of transcription from RNA polymerase I promoter during mitosis' 'positive regulation of transcription from RNA polymerase I promoter') + SubClassOf('positive regulation of transcription from RNA polymerase I promoter during mitosis' 'regulation of transcription from RNA polymerase I promoter, mitotic') + SubClassOf('positive regulation of transcription from RNA polymerase I promoter during mitosis' 'positive regulation of transcription during mitosis') --- !New Class!: http://www.geneontology.org/go#SO_0000287 label: fusion_gene + SubClassOf('fusion_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000235 label: RadiationRelease + SubClassOf('RadiationRelease' 'processual_context') --- !New Class!: http://www.geneontology.org/go#GO_1900416 label: regulation of 4,6-pyruvylated galactose residue biosynthetic process by regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of 4,6-pyruvylated galactose residue biosynthetic process by regulation of transcription from RNA polymerase II promoter' 'regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of 4,6-pyruvylated galactose residue biosynthetic process by regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0072101 label: specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway + SubClassOf('specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway' 'regulation of transcription from RNA polymerase II promoter involved in kidney development') + SubClassOf('specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway' 'BMP signaling pathway') --- !New Class!: http://www.geneontology.org/go#SO_0000128 label: gene_silenced_by_DNA_modification + SubClassOf('gene_silenced_by_DNA_modification' 'silenced_gene') --- !New Class!: http://www.geneontology.org/go#GO_0070476 label: rRNA (guanine-N7)-methylation + SubClassOf('rRNA (guanine-N7)-methylation' 'RNA (guanine-N7)-methylation') + SubClassOf('rRNA (guanine-N7)-methylation' 'rRNA base methylation') --- !New Class!: http://www.geneontology.org/go#GO_0002109 label: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) + SubClassOf('maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)' 'maturation of SSU-rRNA') --- !New Class!: http://www.geneontology.org/go#GO_0000452 label: snoRNA guided rRNA 2'-O-methylation + SubClassOf('snoRNA guided rRNA 2'-O-methylation' 'rRNA 2'-O-methylation') --- !New Class!: http://www.geneontology.org/go#GO_1900405 label: regulation of cytokinetic cell separation by regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of cytokinetic cell separation by regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('regulation of cytokinetic cell separation by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0016480 label: negative regulation of transcription from RNA polymerase III promoter + EquivalentClasses('negative regulation of transcription from RNA polymerase III promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase III promoter') ) + SubClassOf('negative regulation of transcription from RNA polymerase III promoter' 'negative regulation of transcription, DNA-dependent') + SubClassOf('negative regulation of transcription from RNA polymerase III promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase III promoter')) + SubClassOf('negative regulation of transcription from RNA polymerase III promoter' 'regulation of transcription from RNA polymerase III promoter') --- !New Class!: http://www.geneontology.org/go#GO_0043203 label: axon hillock + SubClassOf('axon hillock' ObjectSomeValueFrom('part_of' 'neuronal cell body')) + SubClassOf('axon hillock' 'axon part') --- !New Class!: http://www.geneontology.org/go#OMIT_0000337 label: PeripheralNervousSystem + SubClassOf('PeripheralNervousSystem' 'NervousOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0031437 label: regulation of mRNA cleavage + SubClassOf('regulation of mRNA cleavage' 'regulation of mRNA processing') + EquivalentClasses('regulation of mRNA cleavage' ObjectSomeValueFrom('regulates' 'mRNA cleavage') ) + SubClassOf('regulation of mRNA cleavage' ObjectSomeValueFrom('regulates' 'mRNA cleavage')) --- !New Class!: http://www.geneontology.org/go#SO_0000716 label: dicistronic_mRNA + SubClassOf('dicistronic_mRNA' 'polycistronic_mRNA') --- !New Class!: http://www.geneontology.org/go#GO_0001014 label: snoRNA transcription from a type 2 RNA polymerase III promoter + SubClassOf('snoRNA transcription from a type 2 RNA polymerase III promoter' 'transcription from RNA polymerase III type 2 promoter') + SubClassOf('snoRNA transcription from a type 2 RNA polymerase III promoter' 'snoRNA transcription') --- !New Class!: http://www.geneontology.org/go#GO_0061353 label: BMP signaling pathway involved in Malpighian tubule cell chemotaxis + SubClassOf('BMP signaling pathway involved in Malpighian tubule cell chemotaxis' 'BMP signaling pathway') + EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in Malpighian tubule cell chemotaxis' ) --- !New Class!: http://www.geneontology.org/go#GO_0060570 label: negative regulation of peptide hormone processing + SubClassOf('negative regulation of peptide hormone processing' 'regulation of peptide hormone processing') + SubClassOf('negative regulation of peptide hormone processing' ObjectSomeValueFrom('negatively_regulates' 'peptide hormone processing')) + SubClassOf('negative regulation of peptide hormone processing' 'negative regulation of protein processing') + EquivalentClasses('negative regulation of peptide hormone processing' ObjectSomeValueFrom('negatively_regulates' 'peptide hormone processing') ) --- !New Class!: http://www.geneontology.org/go#GO_0070125 label: mitochondrial translational elongation + SubClassOf('mitochondrial translational elongation' 'translational elongation') + EquivalentClasses('translational elongation' 'mitochondrial translational elongation' ) + SubClassOf('mitochondrial translational elongation' ObjectSomeValueFrom('part_of' 'mitochondrial translation')) --- !New Class!: http://www.geneontology.org/go#GO_1900478 label: positive regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#SO_0001739 label: gene_with_non_canonical_start_codon + SubClassOf('gene_with_non_canonical_start_codon' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0044026 label: DNA hypermethylation + SubClassOf('DNA hypermethylation' 'regulation of DNA methylation') --- !New Class!: http://www.geneontology.org/go#GO_0044640 label: envenomation resulting in negative regulation of complement activation, lectin pathway in other organism + SubClassOf('envenomation resulting in negative regulation of complement activation, lectin pathway in other organism' ObjectSomeValueFrom('has_part' 'negative regulation of complement activation, lectin pathway in other organism')) + SubClassOf('envenomation resulting in negative regulation of complement activation, lectin pathway in other organism' 'envenomation resulting in modulation of complement activation, lectin pathway in other organism') --- !New Class!: http://www.geneontology.org/go#OMIT_0000151 label: EpithelialOrigin + SubClassOf('EpithelialOrigin' 'BenignNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0009303 label: rRNA transcription + SubClassOf('rRNA transcription' 'transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0036415 label: regulation of tRNA stability + SubClassOf('regulation of tRNA stability' 'regulation of RNA stability') --- !New Class!: http://www.geneontology.org/go#GO_2000820 label: negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation' ) + SubClassOf('negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation' 'negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0032809 label: neuronal cell body membrane + SubClassOf('neuronal cell body membrane' ObjectSomeValueFrom('part_of' 'neuronal cell body')) + SubClassOf('neuronal cell body membrane' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_1990145 label: maintenance of translational fidelity + SubClassOf('maintenance of translational fidelity' ObjectSomeValueFrom('part_of' 'translation')) --- !New Class!: http://www.geneontology.org/go#GO_0009452 label: 7-methylguanosine RNA capping + SubClassOf('7-methylguanosine RNA capping' 'RNA capping') --- !New Class!: http://www.geneontology.org/go#MOD_00030 label: N-formyl-L-methionine residue + SubClassOf('N-formyl-L-methionine residue' 'pre-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_0001157 label: RNA polymerase III type 1 promoter TFIIIB recruiting transcription factor activity + SubClassOf('RNA polymerase III type 1 promoter TFIIIB recruiting transcription factor activity' 'RNA polymerase III transcription factor recruiting transcription factor activity') + SubClassOf('RNA polymerase III type 1 promoter TFIIIB recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III type 1 promoter transcriptional preinitiation complex assembly')) --- !New Class!: http://www.geneontology.org/go#snap_MaterialEntity label: material_entity + SubClassOf('material_entity' 'independent_continuant') + EquivalentClasses('material_entity' ObjectUnionOf('fiat_object_part' 'object' 'object'Aggregate) ) + DisjointClasses('material_entity' 'object_boundary') + DisjointClasses('material_entity' 'site') --- !New Class!: http://www.geneontology.org/go#GO_0044296 label: dendritic tuft + SubClassOf('dendritic tuft' 'dendrite terminus') --- !New Class!: http://www.geneontology.org/go#OMIT_0000120 label: TumorCellProliferation + SubClassOf('TumorCellProliferation' 'PathologicalEvent') --- !New Class!: http://www.geneontology.org/go#GO_2000635 label: negative regulation of primary miRNA processing + SubClassOf('negative regulation of primary miRNA processing' 'regulation of primary miRNA processing') + EquivalentClasses('negative regulation of primary miRNA processing' ObjectSomeValueFrom('negatively_regulates' 'primary miRNA processing') ) + SubClassOf('negative regulation of primary miRNA processing' ObjectSomeValueFrom('negatively_regulates' 'primary miRNA processing')) --- !New Class!: http://www.geneontology.org/go#GO_1900097 label: positive regulation of dosage compensation by inactivation of X chromosome + SubClassOf('positive regulation of dosage compensation by inactivation of X chromosome' ObjectSomeValueFrom('positively_regulates' 'dosage compensation by inactivation of X chromosome')) + EquivalentClasses('positive regulation of dosage compensation by inactivation of X chromosome' ObjectSomeValueFrom('positively_regulates' 'dosage compensation by inactivation of X chromosome') ) + SubClassOf('positive regulation of dosage compensation by inactivation of X chromosome' 'regulation of dosage compensation by inactivation of X chromosome') --- !New Class!: http://www.geneontology.org/go#GO_0001216 label: sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription + SubClassOf('sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription' ObjectSomeValueFrom('part_of' 'positive regulation of transcription, DNA-dependent')) + SubClassOf('sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription' 'sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_1901194 label: negative regulation of formation of translation preinitiation complex + EquivalentClasses('negative regulation of formation of translation preinitiation complex' ObjectSomeValueFrom('negatively_regulates' 'formation of translation preinitiation complex') ) + SubClassOf('negative regulation of formation of translation preinitiation complex' 'regulation of formation of translation preinitiation complex') + SubClassOf('negative regulation of formation of translation preinitiation complex' ObjectSomeValueFrom('negatively_regulates' 'formation of translation preinitiation complex')) --- !New Class!: http://www.geneontology.org/go#SO_0000698 label: gene_with_stop_codon_redefined_as_pyrrolysine + SubClassOf('gene_with_stop_codon_redefined_as_pyrrolysine' 'gene_with_stop_codon_read_through') --- !New Class!: http://www.geneontology.org/go#OMIT_0000223 label: Angiosarcoma + SubClassOf('Angiosarcoma' 'Sarcoma') --- !New Class!: http://www.geneontology.org/go#GO_0001167 label: sequence-specific DNA binding RNA polymerase I transcription factor activity + SubClassOf('sequence-specific DNA binding RNA polymerase I transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter')) + SubClassOf('sequence-specific DNA binding RNA polymerase I transcription factor activity' ObjectSomeValueFrom('part_of' 'regulation of transcription from RNA polymerase I promoter')) + SubClassOf('sequence-specific DNA binding RNA polymerase I transcription factor activity' 'sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0045902 label: negative regulation of translational fidelity + SubClassOf('negative regulation of translational fidelity' 'regulation of translational fidelity') + SubClassOf('negative regulation of translational fidelity' 'negative regulation of translation') --- !New Class!: http://www.geneontology.org/go#GO_0048025 label: negative regulation of mRNA splicing, via spliceosome + SubClassOf('negative regulation of mRNA splicing, via spliceosome' 'regulation of mRNA splicing, via spliceosome') + SubClassOf('negative regulation of mRNA splicing, via spliceosome' ObjectSomeValueFrom('negatively_regulates' 'mRNA splicing, via spliceosome')) + SubClassOf('negative regulation of mRNA splicing, via spliceosome' 'negative regulation of mRNA processing') + EquivalentClasses('negative regulation of mRNA splicing, via spliceosome' ObjectSomeValueFrom('negatively_regulates' 'mRNA splicing, via spliceosome') ) + SubClassOf('negative regulation of mRNA splicing, via spliceosome' 'negative regulation of RNA splicing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000214 label: PulmonaryLargeCellCarcinoma + SubClassOf('PulmonaryLargeCellCarcinoma' 'Carcinoma') --- !New Class!: http://www.geneontology.org/go#GO_0070146 label: mitochondrial aspartyl-tRNA aminoacylation + SubClassOf('mitochondrial aspartyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') + SubClassOf('mitochondrial aspartyl-tRNA aminoacylation' 'aspartyl-tRNA aminoacylation') + EquivalentClasses('aspartyl-tRNA aminoacylation' 'mitochondrial aspartyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0001203 label: zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity + SubClassOf('zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity' 'metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0000489 label: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) + SubClassOf('maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)' 'maturation of SSU-rRNA') --- !New Class!: http://www.geneontology.org/go#GO_0002191 label: cap-dependent translational initiation + SubClassOf('cap-dependent translational initiation' 'cytoplasmic translational initiation') --- !New Class!: http://www.geneontology.org/go#GO_0060819 label: inactivation of X chromosome by genetic imprinting + SubClassOf('inactivation of X chromosome by genetic imprinting' 'regulation of gene expression by genetic imprinting') + SubClassOf('inactivation of X chromosome by genetic imprinting' 'dosage compensation by inactivation of X chromosome') --- !New Class!: http://www.geneontology.org/go#GO_0070038 label: rRNA (pseudouridine-N3-)-methyltransferase activity + SubClassOf('rRNA (pseudouridine-N3-)-methyltransferase activity' 'rRNA (pseudouridine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_1900476 label: positive regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('positive regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter' 'regulation of meiosis by regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0050821 label: protein stabilization + SubClassOf('protein stabilization' 'regulation of protein stability') --- !New Class!: http://www.geneontology.org/go#GO_0070924 label: heterochromatin assembly involved in chromatin silencing by small RNA + SubClassOf('heterochromatin assembly involved in chromatin silencing by small RNA' 'heterochromatin assembly involved in chromatin silencing') + EquivalentClasses('heterochromatin assembly involved in chromatin silencing by small RNA' ObjectSomeValueFrom('part_of' 'chromatin silencing by small RNA') ) + SubClassOf('heterochromatin assembly involved in chromatin silencing by small RNA' ObjectSomeValueFrom('part_of' 'chromatin silencing by small RNA')) --- !New Class!: http://www.geneontology.org/go#GO_0001139 label: core RNA polymerase II recruiting transcription factor activity + SubClassOf('core RNA polymerase II recruiting transcription factor activity' 'core RNA polymerase II binding transcription factor activity') + SubClassOf('core RNA polymerase II recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase II transcriptional preinitiation complex assembly')) --- !New Class!: http://www.geneontology.org/go#GO_0071037 label: nuclear polyadenylation-dependent snRNA catabolic process + SubClassOf('nuclear polyadenylation-dependent snRNA catabolic process' 'nuclear polyadenylation-dependent ncRNA catabolic process') --- !New Class!: http://www.geneontology.org/go#GO_0031937 label: positive regulation of chromatin silencing + SubClassOf('positive regulation of chromatin silencing' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing')) + EquivalentClasses('positive regulation of chromatin silencing' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing') ) + SubClassOf('positive regulation of chromatin silencing' 'regulation of chromatin silencing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000126 label: GeneticDisease + SubClassOf('GeneticDisease' 'Disease') --- !New Class!: http://www.geneontology.org/go#snap_Continuant label: continuant + SubClassOf('continuant' ObjectSomeValueFrom('fromTaxon' 'Organism')) + EquivalentClasses('continuant' ObjectUnionOf('dependent_continuant' 'independent_continuant' 'spatial_region') ) + SubClassOf('continuant' 'entity') + DisjointClasses('continuant' 'occurrent') --- !New Class!: http://www.geneontology.org/go#OMIT_0000292 label: SplenicVein + SubClassOf('SplenicVein' 'Vein') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_9604 label: Hominidae + SubClassOf('Hominidae' 'Hominoidea') --- !New Class!: http://www.geneontology.org/go#GO_0002106 label: endonucleolytic cleaveage between SSU-rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) + SubClassOf('endonucleolytic cleaveage between SSU-rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)' 'endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)') --- !New Class!: http://www.geneontology.org/go#GO_0006352 label: DNA-dependent transcription, initiation + SubClassOf('DNA-dependent transcription, initiation' ObjectSomeValueFrom('part_of' 'transcription, DNA-dependent')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000104 label: AdiposeTissue + SubClassOf('AdiposeTissue' 'ConnectiveTissue') --- !New Class!: http://www.geneontology.org/go#GO_0071047 label: polyadenylation-dependent mRNA catabolic process + SubClassOf('polyadenylation-dependent mRNA catabolic process' ObjectSomeValueFrom('has_part' 'mRNA polyadenylation')) --- !New Class!: http://www.geneontology.org/go#GO_0001080 label: nitrogen catabolite activation of transcription from RNA polymerase II promoter + SubClassOf('nitrogen catabolite activation of transcription from RNA polymerase II promoter' 'nitrogen catabolite regulation of transcription from RNA polymerase II promoter') + SubClassOf('nitrogen catabolite activation of transcription from RNA polymerase II promoter' 'nitrogen catabolite activation of transcription') --- !New Class!: http://www.geneontology.org/go#OMIT_0000316 label: Pituitary + SubClassOf('Pituitary' 'EndocrineOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0061151 label: BMP signaling pathway involved in renal system segmentation + EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in renal system segmentation' ) + SubClassOf('BMP signaling pathway involved in renal system segmentation' 'BMP signaling pathway') --- !New Class!: http://www.geneontology.org/go#GO_0061157 label: mRNA destabilization + SubClassOf('mRNA destabilization' 'regulation of mRNA stability') + SubClassOf('mRNA destabilization' 'RNA destabilization') --- !New Class!: http://www.geneontology.org/go#GO_0019084 label: (delayed) early viral mRNA transcription + SubClassOf('(delayed) early viral mRNA transcription' 'mRNA transcription') + SubClassOf('(delayed) early viral mRNA transcription' 'viral transcription') --- !New Class!: http://www.geneontology.org/go#GO_0009304 label: tRNA transcription + SubClassOf('tRNA transcription' 'transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0044632 label: negative regulation of complement activation, lectin pathway in other organism + SubClassOf('negative regulation of complement activation, lectin pathway in other organism' 'negative regulation of complement activation, lectin pathway') + SubClassOf('negative regulation of complement activation, lectin pathway in other organism' 'modulation of complement activation, lectin pathway in other organism') --- !New Class!: http://www.geneontology.org/go#SO_0000104 label: polypeptide + SubClassOf('polypeptide' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0001076 label: RNA polymerase II transcription factor binding transcription factor activity + SubClassOf('RNA polymerase II transcription factor binding transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter')) + SubClassOf('RNA polymerase II transcription factor binding transcription factor activity' ObjectSomeValueFrom('part_of' 'regulation of transcription from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#SO_0001264 label: gRNA_gene + SubClassOf('gRNA_gene' 'ncRNA_gene') --- !New Class!: http://www.geneontology.org/go#GO_0044294 label: dendritic growth cone + SubClassOf('dendritic growth cone' 'dendrite terminus') + SubClassOf('dendritic growth cone' 'growth cone') --- !New Class!: http://www.geneontology.org/go#OMIT_0000112 label: Endoderm + SubClassOf('Endoderm' 'EmbryonicTissue') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_38254 label: Glaucocystophyceae + SubClassOf('Glaucocystophyceae' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#GO_0006360 label: transcription from RNA polymerase I promoter + SubClassOf('transcription from RNA polymerase I promoter' 'transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0019988 label: charged-tRNA amino acid modification + SubClassOf('charged-tRNA amino acid modification' 'tRNA modification') --- !New Class!: http://www.geneontology.org/go#GO_0032938 label: negative regulation of translation in response to oxidative stress + SubClassOf('negative regulation of translation in response to oxidative stress' 'negative regulation of translation in response to stress') + SubClassOf('negative regulation of translation in response to oxidative stress' 'regulation of translation in response to oxidative stress') --- !New Class!: http://www.geneontology.org/go#GO_1900417 label: negative regulation of transmembrane transport by negative regulation of transcription from RNA polymerase II promoter + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transmembrane transport by negative regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('negative regulation of transmembrane transport by negative regulation of transcription from RNA polymerase II promoter' 'regulation of transport by negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#OMIT_0000027 label: GeneSequence + SubClassOf('GeneSequence' 'quality') --- !New Class!: http://www.geneontology.org/go#GO_0016149 label: translation release factor activity, codon specific + SubClassOf('translation release factor activity, codon specific' 'translation release factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0035196 label: production of miRNAs involved in gene silencing by miRNA + SubClassOf('production of miRNAs involved in gene silencing by miRNA' ObjectSomeValueFrom('part_of' 'gene silencing by miRNA')) + SubClassOf('production of miRNAs involved in gene silencing by miRNA' 'production of small RNA involved in gene silencing by RNA') --- !New Class!: http://www.geneontology.org/go#GO_0006391 label: transcription initiation from mitochondrial promoter + SubClassOf('transcription initiation from mitochondrial promoter' 'DNA-dependent transcription, initiation') + SubClassOf('transcription initiation from mitochondrial promoter' ObjectSomeValueFrom('part_of' 'transcription from mitochondrial promoter')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000301 label: GreaterOmentum + SubClassOf('GreaterOmentum' 'DigestiveOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0002110 label: cotranscriptional mitochondrial rRNA nucleotide insertion + SubClassOf('cotranscriptional mitochondrial rRNA nucleotide insertion' 'rRNA modification') --- !New Class!: http://www.geneontology.org/go#GO_0034244 label: negative regulation of transcription elongation from RNA polymerase II promoter + EquivalentClasses('negative regulation of transcription elongation from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription elongation from RNA polymerase II promoter') ) + SubClassOf('negative regulation of transcription elongation from RNA polymerase II promoter' 'regulation of transcription elongation from RNA polymerase II promoter') + SubClassOf('negative regulation of transcription elongation from RNA polymerase II promoter' 'negative regulation of DNA-dependent transcription, elongation') + SubClassOf('negative regulation of transcription elongation from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription elongation from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0060735 label: regulation of eIF2 alpha phosphorylation by dsRNA + SubClassOf('regulation of eIF2 alpha phosphorylation by dsRNA' ObjectSomeValueFrom('regulates' 'regulation of translational initiation by eIF2 alpha phosphorylation')) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_554915 label: Amoebozoa + SubClassOf('Amoebozoa' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_556282 label: Jakobida + SubClassOf('Jakobida' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#GO_0045182 label: translation regulator activity + SubClassOf('translation regulator activity' ObjectSomeValueFrom('part_of' 'regulation of translation')) --- !New Class!: http://www.geneontology.org/go#GO_0060849 label: regulation of transcription involved in lymphatic endothelial cell fate commitment + SubClassOf('regulation of transcription involved in lymphatic endothelial cell fate commitment' 'regulation of transcription involved in cell fate commitment') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in lymphatic endothelial cell fate commitment' ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000282 label: MitralValve + SubClassOf('MitralValve' 'Valves') --- !New Class!: http://www.geneontology.org/go#GO_0001146 label: mitochondrial RNA polymerase terminator site sequence-specific DNA binding transcription factor activity + SubClassOf('mitochondrial RNA polymerase terminator site sequence-specific DNA binding transcription factor activity' ObjectSomeValueFrom('part_of' 'termination of mitochondrial transcription')) + SubClassOf('mitochondrial RNA polymerase terminator site sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding mitochondrial RNA polymerase transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0060147 label: regulation of posttranscriptional gene silencing + SubClassOf('regulation of posttranscriptional gene silencing' 'regulation of gene silencing') + SubClassOf('regulation of posttranscriptional gene silencing' ObjectSomeValueFrom('regulates' 'posttranscriptional gene silencing')) + EquivalentClasses('regulation of posttranscriptional gene silencing' ObjectSomeValueFrom('regulates' 'posttranscriptional gene silencing') ) --- !New Class!: http://www.geneontology.org/go#GO_0051718 label: DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates + SubClassOf('DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates' 'DNA (cytosine-5-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000208 label: LobularCarcinoma + SubClassOf('LobularCarcinoma' 'Carcinoma') --- !New Class!: http://www.geneontology.org/go#SO_1000002 label: substitution + SubClassOf('substitution' 'biological_region') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_9479 label: Platyrrhini + SubClassOf('Platyrrhini' 'Simiiformes') --- !New Class!: http://www.geneontology.org/go#GO_0036129 label: negative regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide + SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide' 'negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress') --- !New Class!: http://www.geneontology.org/go#SO_0000891 label: negatively_autoregulated_gene + SubClassOf('negatively_autoregulated_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000173 label: LymphoidNeoplasm + SubClassOf('LymphoidNeoplasm' 'LeukemiaAndLymphoma') --- !New Class!: http://www.geneontology.org/go#GO_0001089 label: TFIIF-class binding transcription factor activity + SubClassOf('TFIIF-class binding transcription factor activity' 'RNA polymerase II basal transcription factor binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000179 label: HodgkinLymphoma + SubClassOf('HodgkinLymphoma' 'LymphoidNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0006430 label: lysyl-tRNA aminoacylation + SubClassOf('lysyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') + EquivalentClasses('lysyl-tRNA aminoacylation' 'mitochondrial lysyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#span_Occurrent label: occurrent + EquivalentClasses('occurrent' ObjectUnionOf('processual_entity' 'spatiotemporal_region' 'temporal_region') ) + SubClassOf('occurrent' 'entity') + DisjointClasses('continuant' 'occurrent') --- !New Class!: http://www.geneontology.org/go#GO_1900547 label: negative regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter + SubClassOf('negative regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' 'regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'negative regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0070041 label: rRNA (uridine-C5-)-methyltransferase activity + SubClassOf('rRNA (uridine-C5-)-methyltransferase activity' 'rRNA (uridine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0008588 label: release of cytoplasmic sequestered NF-kappaB + SubClassOf('release of cytoplasmic sequestered NF-kappaB' 'positive regulation of NF-kappaB import into nucleus') + SubClassOf('release of cytoplasmic sequestered NF-kappaB' ObjectSomeValueFrom('negatively_regulates' 'cytoplasmic sequestering of NF-kappaB')) + SubClassOf('release of cytoplasmic sequestered NF-kappaB' ObjectSomeValueFrom('part_of' 'I-kappaB kinase/NF-kappaB cascade')) --- !New Class!: http://www.geneontology.org/go#GO_0003154 label: BMP signaling pathway involved in determination of left/right symmetry + SubClassOf('BMP signaling pathway involved in determination of left/right symmetry' 'BMP signaling pathway') + SubClassOf('BMP signaling pathway involved in determination of left/right symmetry' 'regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry') + EquivalentClasses('BMP signaling pathway involved in determination of left/right symmetry' 'BMP signaling pathway' ) --- !New Class!: http://www.geneontology.org/go#GO_0043906 label: Ala-tRNA(Pro) hydrolase activity + SubClassOf('Ala-tRNA(Pro) hydrolase activity' 'aminoacyl-tRNA editing activity') --- !New Class!: http://www.geneontology.org/go#span_ConnectedSpatiotemporalRegion label: connected_spatiotemporal_region + SubClassOf('connected_spatiotemporal_region' 'spatiotemporal_region') + DisjointClasses('connected_spatiotemporal_region' 'scattered_spatiotemporal_region') + EquivalentClasses('connected_spatiotemporal_region' ObjectUnionOf('spatiotemporal_instant' 'spatiotemporal_interval') ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000259 label: Aorta + SubClassOf('Aorta' 'Artery') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_57118 label: Unclassified Primates + SubClassOf('Unclassified Primates' 'Primates') --- !New Class!: http://www.geneontology.org/go#GO_0030466 label: chromatin silencing at silent mating-type cassette + SubClassOf('chromatin silencing at silent mating-type cassette' 'chromatin silencing') --- !New Class!: http://www.geneontology.org/go#GO_0006450 label: regulation of translational fidelity + SubClassOf('regulation of translational fidelity' 'regulation of translational elongation') --- !New Class!: http://www.geneontology.org/go#GO_0075526 label: cap snatching + SubClassOf('cap snatching' ObjectSomeValueFrom('part_of' 'viral transcription')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000083 label: SchwannCell + SubClassOf('SchwannCell' 'MacroglialCell') --- !New Class!: http://www.geneontology.org/go#GO_1900388 label: regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0006436 label: tryptophanyl-tRNA aminoacylation + SubClassOf('tryptophanyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') + EquivalentClasses('tryptophanyl-tRNA aminoacylation' 'mitochondrial tryptophanyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0001184 label: promoter clearance from RNA polymerase I promoter for nuclear large rRNA transcript + SubClassOf('promoter clearance from RNA polymerase I promoter for nuclear large rRNA transcript' 'promoter clearance from RNA polymerase I promoter') + SubClassOf('promoter clearance from RNA polymerase I promoter for nuclear large rRNA transcript' ObjectSomeValueFrom('part_of' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000278 label: Ventricles + SubClassOf('Ventricles' 'Heart') --- !New Class!: http://www.geneontology.org/go#GO_1902360 label: conversion of ds siRNA to ss siRNA involved in chromatin silencing by small RNA + SubClassOf('conversion of ds siRNA to ss siRNA involved in chromatin silencing by small RNA' ObjectSomeValueFrom('part_of' 'chromatin silencing by small RNA')) + SubClassOf('conversion of ds siRNA to ss siRNA involved in chromatin silencing by small RNA' 'conversion of ds siRNA to ss siRNA') + EquivalentClasses('conversion of ds siRNA to ss siRNA involved in chromatin silencing by small RNA' ObjectIntersectionOf('conversion of ds siRNA to ss siRNA' ObjectSomeValueFrom('part_of' 'chromatin silencing by small RNA')) ) --- !New Class!: http://www.geneontology.org/go#GO_0033415 label: UGA codon-amino acid adaptor activity + SubClassOf('UGA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000377 label: Urethra + SubClassOf('Urethra' 'UrinaryOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0030451 label: regulation of complement activation, alternative pathway + SubClassOf('regulation of complement activation, alternative pathway' 'regulation of complement activation') --- !New Class!: http://www.geneontology.org/go#OMIT_0000028 label: Pressure + SubClassOf('Pressure' 'EnvironmentalVariable') --- !New Class!: http://www.geneontology.org/go#GO_0000430 label: regulation of transcription from RNA polymerase II promoter by glucose + SubClassOf('regulation of transcription from RNA polymerase II promoter by glucose' 'carbon catabolite regulation of transcription from RNA polymerase II promoter') + SubClassOf('regulation of transcription from RNA polymerase II promoter by glucose' 'regulation of transcription by glucose') --- !New Class!: http://www.geneontology.org/go#OMIT_0000144 label: PrimaryCardiacRhabdomyoma + SubClassOf('PrimaryCardiacRhabdomyoma' 'HamartomaOrMalformation') --- !New Class!: http://www.geneontology.org/go#OMIT_0000032 label: NormalPressure + SubClassOf('NormalPressure' 'Pressure') --- !New Class!: http://www.geneontology.org/go#GO_0010610 label: regulation of mRNA stability involved in response to stress + EquivalentClasses('regulation of mRNA stability involved in response to stress' 'regulation of mRNA stability' ) + SubClassOf('regulation of mRNA stability involved in response to stress' 'regulation of mRNA stability') --- !New Class!: http://www.geneontology.org/go#OMIT_0000067 label: NK + SubClassOf('NK' 'Lymphocytes') --- !New Class!: http://www.geneontology.org/go#SO_0000462 label: pseudogenic_region + SubClassOf('pseudogenic_region' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0043679 label: axon terminus + SubClassOf('axon terminus' 'neuron projection terminus') + SubClassOf('axon terminus' 'axon part') --- !New Class!: http://www.geneontology.org/go#GO_0060852 label: regulation of transcription involved in venous endothelial cell fate commitment + SubClassOf('regulation of transcription involved in venous endothelial cell fate commitment' 'regulation of transcription involved in cell fate commitment') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in venous endothelial cell fate commitment' ) --- !New Class!: http://www.geneontology.org/go#GO_2000232 label: regulation of rRNA processing + SubClassOf('regulation of rRNA processing' 'regulation of gene expression') + EquivalentClasses('regulation of rRNA processing' ObjectSomeValueFrom('regulates' 'rRNA processing') ) + SubClassOf('regulation of rRNA processing' ObjectSomeValueFrom('regulates' 'rRNA processing')) --- !New Class!: http://www.geneontology.org/go#GO_0030449 label: regulation of complement activation + SubClassOf('regulation of complement activation' 'regulation of protein processing') --- !New Class!: http://www.geneontology.org/go#GO_0090419 label: negative regulation of transcription involved in G2/M transition of mitotic cell cycle + SubClassOf('negative regulation of transcription involved in G2/M transition of mitotic cell cycle' 'regulation of transcription involved in G2/M transition of mitotic cell cycle') + EquivalentClasses('negative regulation of transcription, DNA-dependent' 'negative regulation of transcription involved in G2/M transition of mitotic cell cycle' ) --- !New Class!: http://www.geneontology.org/go#GO_0044029 label: hypomethylation of CpG island + SubClassOf('hypomethylation of CpG island' 'DNA hypomethylation') --- !New Class!: http://www.geneontology.org/go#GO_0001180 label: transcription initiation from RNA polymerase I promoter for nuclear large rRNA transcript + SubClassOf('transcription initiation from RNA polymerase I promoter for nuclear large rRNA transcript' ObjectSomeValueFrom('part_of' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter')) + SubClassOf('transcription initiation from RNA polymerase I promoter for nuclear large rRNA transcript' 'transcription initiation from RNA polymerase I promoter') --- !New Class!: http://www.geneontology.org/go#SO_0001872 label: rearrangement_breakpoint + SubClassOf('rearrangement_breakpoint' 'biological_region') --- !New Class!: http://www.geneontology.org/go#OMIT_0000354 label: Cervix + SubClassOf('Cervix' 'FemaleReproductiveSystem') --- !New Class!: http://www.geneontology.org/go#span_ScatteredTemporalRegion label: scattered_temporal_region + SubClassOf('scattered_temporal_region' 'temporal_region') + DisjointClasses('connected_temporal_region' 'scattered_temporal_region') --- !New Class!: http://www.geneontology.org/go#OMIT_0000219 label: BronchioalveolarPulmonaryAdenocarcinoma + SubClassOf('BronchioalveolarPulmonaryAdenocarcinoma' 'PulmonaryAdenocarcinoma') --- !New Class!: http://www.geneontology.org/go#GO_1900404 label: positive regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('positive regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#OMIT_0000304 label: Liver + SubClassOf('Liver' 'DigestiveOrgan') --- !New Class!: http://www.geneontology.org/go#OMIT_0000269 label: SubclavianArtery + SubClassOf('SubclavianArtery' 'Artery') --- !New Class!: http://www.geneontology.org/go#GO_0044316 label: cone cell pedicle + SubClassOf('cone cell pedicle' 'axon terminus') --- !New Class!: http://www.geneontology.org/go#OMIT_0000321 label: AdrenalCortex + SubClassOf('AdrenalCortex' 'SuprarenalGlands') --- !New Class!: http://www.geneontology.org/go#GO_0016150 label: translation release factor activity, codon nonspecific + SubClassOf('translation release factor activity, codon nonspecific' 'translation release factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0006431 label: methionyl-tRNA aminoacylation + EquivalentClasses('methionyl-tRNA aminoacylation' 'mitochondrial methionyl-tRNA aminoacylation' ) + SubClassOf('methionyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- !New Class!: http://www.geneontology.org/go#GO_0044028 label: DNA hypomethylation + SubClassOf('DNA hypomethylation' 'regulation of DNA methylation') --- !New Class!: http://www.geneontology.org/go#OMIT_0000299 label: Esophagus + SubClassOf('Esophagus' 'DigestiveOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0031935 label: regulation of chromatin silencing + SubClassOf('regulation of chromatin silencing' 'regulation of transcription, DNA-dependent') + EquivalentClasses('regulation of chromatin silencing' ObjectSomeValueFrom('regulates' 'chromatin silencing') ) + SubClassOf('regulation of chromatin silencing' ObjectSomeValueFrom('regulates' 'chromatin silencing')) + SubClassOf('regulation of chromatin silencing' 'regulation of gene silencing') --- !New Class!: http://www.geneontology.org/go#GO_0000395 label: mRNA 5'-splice site recognition + SubClassOf('mRNA 5'-splice site recognition' ObjectSomeValueFrom('part_of' 'mRNA cis splicing, via spliceosome')) + SubClassOf('mRNA 5'-splice site recognition' 'mRNA splice site selection') --- !New Class!: http://www.geneontology.org/go#GO_0039551 label: suppression by virus of host IRF3 activity by positive regulation of IRF3 catabolic process + SubClassOf('suppression by virus of host IRF3 activity by positive regulation of IRF3 catabolic process' 'suppression by virus of host IRF3 activity') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_9392 label: Scandentia + SubClassOf('Scandentia' 'Euarchontoglires') --- !New Class!: http://www.geneontology.org/go#OMIT_0000178 label: PrimaryMyelofibrosis + SubClassOf('PrimaryMyelofibrosis' 'ChronicMyeloproliferativeDisorders') --- !New Class!: http://www.geneontology.org/go#OMIT_0000296 label: Anus + SubClassOf('Anus' 'DigestiveOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0033433 label: AUU codon-amino acid adaptor activity + SubClassOf('AUU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000252 label: NervousOrgan + SubClassOf('NervousOrgan' 'AnatomicFeature') --- !New Class!: http://www.geneontology.org/go#GO_0043487 label: regulation of RNA stability + SubClassOf('regulation of RNA stability' 'posttranscriptional regulation of gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0090475 label: lys-lys specific dibasic protein processing + SubClassOf('lys-lys specific dibasic protein processing' 'dibasic protein processing') --- !New Class!: http://www.geneontology.org/go#GO_0000429 label: carbon catabolite regulation of transcription from RNA polymerase II promoter + SubClassOf('carbon catabolite regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') + SubClassOf('carbon catabolite regulation of transcription from RNA polymerase II promoter' 'carbon catabolite regulation of transcription') --- !New Class!: http://www.geneontology.org/go#GO_0001126 label: bacterial-type RNA polymerase preinitiation complex assembly + SubClassOf('bacterial-type RNA polymerase preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'transcription initiation from bacterial-type RNA polymerase promoter')) + SubClassOf('bacterial-type RNA polymerase preinitiation complex assembly' 'DNA-dependent transcriptional preinitiation complex assembly') --- !New Class!: http://www.geneontology.org/go#GO_0043143 label: regulation of translation by machinery localization + SubClassOf('regulation of translation by machinery localization' 'regulation of translation') + EquivalentClasses('regulation of translation by machinery localization' ObjectSomeValueFrom('part_of' 'translation') ) --- !New Class!: http://www.geneontology.org/go#GO_2000631 label: regulation of pre-miRNA processing + SubClassOf('regulation of pre-miRNA processing' ObjectSomeValueFrom('regulates' 'pre-miRNA processing')) + SubClassOf('regulation of pre-miRNA processing' 'regulation of gene silencing by miRNA') + EquivalentClasses('regulation of pre-miRNA processing' ObjectSomeValueFrom('regulates' 'pre-miRNA processing') ) + SubClassOf('regulation of pre-miRNA processing' 'regulation of production of small RNA involved in gene silencing by RNA') --- !New Class!: http://www.geneontology.org/go#GO_0000968 label: tRNA exon ligation + SubClassOf('tRNA exon ligation' 'RNA exon ligation') + SubClassOf('tRNA exon ligation' ObjectSomeValueFrom('part_of' 'tRNA splicing, via endonucleolytic cleavage and ligation')) --- !New Class!: http://www.geneontology.org/go#GO_0004882 label: androgen receptor activity + SubClassOf('androgen receptor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0039607 label: proteolysis by virus of host translation initiation factor + SubClassOf('proteolysis by virus of host translation initiation factor' 'suppression by virus of host translation initiation factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0060816 label: random inactivation of X chromosome + SubClassOf('random inactivation of X chromosome' 'dosage compensation by inactivation of X chromosome') --- !New Class!: http://www.geneontology.org/go#OMIT_0000059 label: Erythrocyte + SubClassOf('Erythrocyte' 'ConnectiveTissueCell') --- !New Class!: http://www.geneontology.org/go#GO_1900094 label: regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry' ) --- !New Class!: http://www.geneontology.org/go#GO_1990030 label: pericellular basket + SubClassOf('pericellular basket' 'axon part') --- !New Class!: http://www.geneontology.org/go#SO_0001271 label: tmRNA_gene + SubClassOf('tmRNA_gene' 'ncRNA_gene') --- !New Class!: http://www.geneontology.org/go#SO_0000568 label: bidirectional_promoter + SubClassOf('bidirectional_promoter' 'promoter') --- !New Class!: http://www.geneontology.org/go#SO_0000459 label: gene_with_trans_spliced_transcript + SubClassOf('gene_with_trans_spliced_transcript' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0001090 label: TFIIH-class binding transcription factor activity + SubClassOf('TFIIH-class binding transcription factor activity' 'RNA polymerase II basal transcription factor binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000310 label: AscendingColon + SubClassOf('AscendingColon' 'Colon') --- !New Class!: http://www.geneontology.org/go#GO_1901619 label: tRNA methylation in response to nitrogen starvation + EquivalentClasses('tRNA methylation in response to nitrogen starvation' ObjectSomeValueFrom('results_in' 'tRNA methylation') ) + SubClassOf('tRNA methylation in response to nitrogen starvation' 'tRNA methylation') --- !New Class!: http://www.geneontology.org/go#GO_2000765 label: regulation of cytoplasmic translation + SubClassOf('regulation of cytoplasmic translation' ObjectSomeValueFrom('regulates' 'cytoplasmic translation')) + EquivalentClasses('regulation of cytoplasmic translation' ObjectSomeValueFrom('regulates' 'cytoplasmic translation') ) + SubClassOf('regulation of cytoplasmic translation' 'regulation of translation') --- !New Class!: http://www.geneontology.org/go#GO_0000963 label: mitochondrial RNA processing + EquivalentClasses('mitochondrial RNA processing' 'RNA processing' ) + SubClassOf('mitochondrial RNA processing' 'RNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0008649 label: rRNA methyltransferase activity + SubClassOf('rRNA methyltransferase activity' ObjectSomeValueFrom('part_of' 'rRNA methylation')) --- !New Class!: http://www.geneontology.org/go#GO_1990038 label: Lewy body corona + SubClassOf('Lewy body corona' 'neuron part') + SubClassOf('Lewy body corona' ObjectSomeValueFrom('part_of' 'Lewy body')) --- !New Class!: http://www.geneontology.org/go#GO_0061410 label: positive regulation of transcription from RNA polymerase II promoter in response to ethanol + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to ethanol' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_1902010 label: negative regulation of translation involved in response to endoplasmic reticulum stress + EquivalentClasses('negative regulation of translation' 'negative regulation of translation involved in response to endoplasmic reticulum stress' ) + SubClassOf('negative regulation of translation involved in response to endoplasmic reticulum stress' 'negative regulation of translation') --- !New Class!: http://www.geneontology.org/go#SO_0000833 label: transcript_region + SubClassOf('transcript_region' 'biological_region') --- !New Class!: http://www.geneontology.org/go#OMIT_0000265 label: IliacArtery + SubClassOf('IliacArtery' 'Artery') --- !New Class!: http://www.geneontology.org/go#GO_0032062 label: positive regulation of translation in response to osmotic stress + SubClassOf('positive regulation of translation in response to osmotic stress' 'positive regulation of translation in response to stress') + SubClassOf('positive regulation of translation in response to osmotic stress' 'regulation of translation in response to osmotic stress') --- !New Class!: http://www.geneontology.org/go#GO_0072364 label: regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_0072692 label: chromatin silencing at centromere central core + SubClassOf('chromatin silencing at centromere central core' 'chromatin silencing at centromere') --- !New Class!: http://www.geneontology.org/go#OMIT_0000342 label: Cerebrum + SubClassOf('Cerebrum' 'Brain') --- !New Class!: http://www.geneontology.org/go#GO_0001113 label: transcriptional open complex formation at RNA polymerase II promoter + SubClassOf('transcriptional open complex formation at RNA polymerase II promoter' 'DNA-dependent transcriptional open complex formation') + SubClassOf('transcriptional open complex formation at RNA polymerase II promoter' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0006428 label: isoleucyl-tRNA aminoacylation + EquivalentClasses('isoleucyl-tRNA aminoacylation' 'mitochondrial isoleucyl-tRNA aminoacylation' ) + SubClassOf('isoleucyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- !New Class!: http://www.geneontology.org/go#GO_0006414 label: translational elongation + EquivalentClasses('translational elongation' 'mitochondrial translational elongation' ) + SubClassOf('translational elongation' ObjectSomeValueFrom('part_of' 'translation')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000197 label: SmallLymphocyticLymphomaChronicLymphocyticLeukemia + SubClassOf('SmallLymphocyticLymphomaChronicLymphocyticLeukemia' 'MatureBCellNeoplasm') --- !New Class!: http://www.geneontology.org/go#SO_0000127 label: silenced_gene + SubClassOf('silenced_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0060965 label: negative regulation of gene silencing by miRNA + SubClassOf('negative regulation of gene silencing by miRNA' 'regulation of gene silencing by miRNA') + SubClassOf('negative regulation of gene silencing by miRNA' ObjectSomeValueFrom('negatively_regulates' 'gene silencing by miRNA')) + EquivalentClasses('negative regulation of gene silencing by miRNA' ObjectSomeValueFrom('negatively_regulates' 'gene silencing by miRNA') ) + SubClassOf('negative regulation of gene silencing by miRNA' 'negative regulation of gene silencing by RNA') + SubClassOf('negative regulation of gene silencing by miRNA' 'negative regulation of posttranscriptional gene silencing') --- !New Class!: http://www.geneontology.org/go#GO_0097463 label: gemmule + SubClassOf('gemmule' 'neuron projection') --- !New Class!: http://www.geneontology.org/go#GO_1900248 label: negative regulation of cytoplasmic translational elongation + SubClassOf('negative regulation of cytoplasmic translational elongation' 'regulation of cytoplasmic translational elongation') + SubClassOf('negative regulation of cytoplasmic translational elongation' 'negative regulation of translational elongation') + SubClassOf('negative regulation of cytoplasmic translational elongation' ObjectSomeValueFrom('negatively_regulates' 'cytoplasmic translational elongation')) + EquivalentClasses('negative regulation of cytoplasmic translational elongation' ObjectSomeValueFrom('negatively_regulates' 'cytoplasmic translational elongation') ) --- !New Class!: http://www.geneontology.org/go#snap_RealizableEntity label: realizable_entity + SubClassOf('realizable_entity' 'specifically_dependent_continuant') + DisjointClasses('quality' 'realizable_entity') --- !New Class!: http://www.geneontology.org/go#GO_1990033 label: dendritic branch point + SubClassOf('dendritic branch point' ObjectSomeValueFrom('part_of' 'dendrite')) + SubClassOf('dendritic branch point' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_1901224 label: positive regulation of NIK/NF-kappaB cascade + SubClassOf('positive regulation of NIK/NF-kappaB cascade' ObjectSomeValueFrom('positively_regulates' 'NIK/NF-kappaB cascade')) + SubClassOf('positive regulation of NIK/NF-kappaB cascade' 'regulation of NIK/NF-kappaB cascade') + EquivalentClasses('positive regulation of NIK/NF-kappaB cascade' ObjectSomeValueFrom('positively_regulates' 'NIK/NF-kappaB cascade') ) --- !New Class!: http://www.geneontology.org/go#GO_0075525 label: viral translational termination-reinitiation + SubClassOf('viral translational termination-reinitiation' ObjectSomeValueFrom('part_of' 'viral translation')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000117 label: RadiationExposure + SubClassOf('RadiationExposure' 'biological_process') --- !New Class!: http://www.geneontology.org/go#GO_0000387 label: spliceosomal snRNP assembly + SubClassOf('spliceosomal snRNP assembly' ObjectSomeValueFrom('part_of' 'mRNA splicing, via spliceosome')) --- !New Class!: http://www.geneontology.org/go#GO_0061188 label: negative regulation of chromatin silencing at rDNA + EquivalentClasses('negative regulation of chromatin silencing at rDNA' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing at rDNA') ) + SubClassOf('negative regulation of chromatin silencing at rDNA' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing at rDNA')) + SubClassOf('negative regulation of chromatin silencing at rDNA' 'negative regulation of chromatin silencing') + SubClassOf('negative regulation of chromatin silencing at rDNA' 'regulation of chromatin silencing at rDNA') --- !New Class!: http://www.geneontology.org/go#GO_0006343 label: establishment of chromatin silencing + SubClassOf('establishment of chromatin silencing' ObjectSomeValueFrom('part_of' 'chromatin silencing')) --- !New Class!: http://www.geneontology.org/go#GO_0010468 label: regulation of gene expression + EquivalentClasses('regulation of gene expression' ObjectSomeValueFrom('regulates' 'gene expression') ) + SubClassOf('regulation of gene expression' ObjectSomeValueFrom('regulates' 'gene expression')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000351 label: SpinalNerves + SubClassOf('SpinalNerves' 'PeripheralNerves') --- !New Class!: http://www.geneontology.org/go#GO_0046781 label: dispersion by virus of host splicing factors + SubClassOf('dispersion by virus of host splicing factors' 'modification by virus of host mRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0070132 label: regulation of mitochondrial translational initiation + SubClassOf('regulation of mitochondrial translational initiation' 'regulation of translational initiation') + SubClassOf('regulation of mitochondrial translational initiation' ObjectSomeValueFrom('regulates' 'mitochondrial translational initiation')) + EquivalentClasses('regulation of mitochondrial translational initiation' ObjectSomeValueFrom('regulates' 'mitochondrial translational initiation') ) + SubClassOf('regulation of mitochondrial translational initiation' 'regulation of mitochondrial translation') --- !New Class!: http://www.geneontology.org/go#OMIT_0000254 label: RespiratoryOrgan + SubClassOf('RespiratoryOrgan' 'AnatomicFeature') --- !New Class!: http://www.geneontology.org/go#GO_0030631 label: pyrrolysine incorporation + SubClassOf('pyrrolysine incorporation' 'translational readthrough') --- !New Class!: http://www.geneontology.org/go#OMIT_0000256 label: Artery + SubClassOf('Artery' 'CardiovascularFeature') --- !New Class!: http://www.geneontology.org/go#OMIT_0000375 label: Kidney + SubClassOf('Kidney' 'UrinaryOrgan') --- !New Class!: http://www.geneontology.org/go#SO_0000633 label: monocistronic_mRNA + SubClassOf('monocistronic_mRNA' 'mRNA') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_7711 label: Chordata + SubClassOf('Chordata' 'Deuterostomia') --- !New Class!: http://www.geneontology.org/go#GO_0001127 label: transcriptional open complex formation at bacterial-type RNA polymerase promoter + SubClassOf('transcriptional open complex formation at bacterial-type RNA polymerase promoter' ObjectSomeValueFrom('part_of' 'transcription initiation from bacterial-type RNA polymerase promoter')) + SubClassOf('transcriptional open complex formation at bacterial-type RNA polymerase promoter' 'DNA-dependent transcriptional open complex formation') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_33090 label: Viridiplantae + SubClassOf('Viridiplantae' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#GO_0001021 label: RNA polymerase III type 2 promoter transcriptional preinitiation complex assembly + SubClassOf('RNA polymerase III type 2 promoter transcriptional preinitiation complex assembly' 'RNA polymerase III transcriptional preinitiation complex assembly') + SubClassOf('RNA polymerase III type 2 promoter transcriptional preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase III type 2 promoter')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000374 label: Bladder + SubClassOf('Bladder' 'UrinaryOrgan') --- !New Class!: http://www.geneontology.org/go#OMIT_0000315 label: PinealGland + SubClassOf('PinealGland' 'EndocrineOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0000481 label: maturation of 5S rRNA + SubClassOf('maturation of 5S rRNA' 'rRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0033423 label: CCA codon-amino acid adaptor activity + SubClassOf('CCA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000287 label: HepaticPortalVein + SubClassOf('HepaticPortalVein' 'Vein') --- !New Class!: http://www.geneontology.org/go#OMIT_0000143 label: NeuralDisease + SubClassOf('NeuralDisease' 'OrganSystemDisease') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_9254 label: Prototheria + SubClassOf('Prototheria' 'Mammalia') --- !New Class!: http://www.geneontology.org/go#GO_0000389 label: mRNA 3'-splice site recognition + SubClassOf('mRNA 3'-splice site recognition' 'mRNA splice site selection') --- !New Class!: http://www.geneontology.org/go#GO_0043124 label: negative regulation of I-kappaB kinase/NF-kappaB cascade + EquivalentClasses('negative regulation of I-kappaB kinase/NF-kappaB cascade' ObjectSomeValueFrom('negatively_regulates' 'I-kappaB kinase/NF-kappaB cascade') ) + SubClassOf('negative regulation of I-kappaB kinase/NF-kappaB cascade' 'regulation of I-kappaB kinase/NF-kappaB cascade') + SubClassOf('negative regulation of I-kappaB kinase/NF-kappaB cascade' ObjectSomeValueFrom('negatively_regulates' 'I-kappaB kinase/NF-kappaB cascade')) --- !New Class!: http://www.geneontology.org/go#GO_0016458 label: gene silencing + SubClassOf('gene silencing' 'negative regulation of gene expression') + EquivalentClasses('gene silencing involved in chronological cell aging' 'gene silencing' ) --- !New Class!: http://www.geneontology.org/go#GO_0044327 label: dendritic spine head + SubClassOf('dendritic spine head' ObjectSomeValueFrom('part_of' 'dendritic spine')) + SubClassOf('dendritic spine head' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0045872 label: positive regulation of rhodopsin gene expression + SubClassOf('positive regulation of rhodopsin gene expression' 'regulation of rhodopsin gene expression') + SubClassOf('positive regulation of rhodopsin gene expression' 'positive regulation of gene expression') --- !New Class!: http://www.geneontology.org/go#SO_0000370 label: small_regulatory_ncRNA + SubClassOf('small_regulatory_ncRNA' 'ncRNA') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_30656 label: Dermoptera + SubClassOf('Dermoptera' 'Euarchontoglires') --- !New Class!: http://www.geneontology.org/go#GO_0006370 label: 7-methylguanosine mRNA capping + SubClassOf('7-methylguanosine mRNA capping' '7-methylguanosine RNA capping') + SubClassOf('7-methylguanosine mRNA capping' 'mRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0060567 label: negative regulation of DNA-dependent transcription, termination + SubClassOf('negative regulation of DNA-dependent transcription, termination' ObjectSomeValueFrom('negatively_regulates' 'DNA-dependent transcription, termination')) + SubClassOf('negative regulation of DNA-dependent transcription, termination' 'negative regulation of transcription, DNA-dependent') + SubClassOf('negative regulation of DNA-dependent transcription, termination' 'regulation of DNA-dependent transcription, termination') + EquivalentClasses('negative regulation of DNA-dependent transcription, termination' ObjectSomeValueFrom('negatively_regulates' 'DNA-dependent transcription, termination') ) --- !New Class!: http://www.geneontology.org/go#GO_0006452 label: translational frameshifting + SubClassOf('translational frameshifting' 'translational elongation') --- !New Class!: http://www.geneontology.org/go#GO_0035600 label: tRNA methylthiolation + SubClassOf('tRNA methylthiolation' 'tRNA modification') --- !New Class!: http://www.geneontology.org/go#GO_0035952 label: negative regulation of oligopeptide transport by negative regulation of transcription from RNA polymerase II promoter + SubClassOf('negative regulation of oligopeptide transport by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') + SubClassOf('negative regulation of oligopeptide transport by negative regulation of transcription from RNA polymerase II promoter' 'regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('negative regulation of oligopeptide transport by negative regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase II promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_0048024 label: regulation of mRNA splicing, via spliceosome + EquivalentClasses('regulation of mRNA splicing, via spliceosome' ObjectSomeValueFrom('regulates' 'mRNA splicing, via spliceosome') ) + SubClassOf('regulation of mRNA splicing, via spliceosome' 'regulation of RNA splicing') + SubClassOf('regulation of mRNA splicing, via spliceosome' 'regulation of mRNA processing') + SubClassOf('regulation of mRNA splicing, via spliceosome' ObjectSomeValueFrom('regulates' 'mRNA splicing, via spliceosome')) --- !New Class!: http://www.geneontology.org/go#GO_0031936 label: negative regulation of chromatin silencing + EquivalentClasses('negative regulation of chromatin silencing' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing') ) + SubClassOf('negative regulation of chromatin silencing' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing')) + SubClassOf('negative regulation of chromatin silencing' 'positive regulation of transcription, DNA-dependent') + SubClassOf('negative regulation of chromatin silencing' 'negative regulation of gene silencing') + SubClassOf('negative regulation of chromatin silencing' 'positive regulation of gene expression, epigenetic') + SubClassOf('negative regulation of chromatin silencing' 'regulation of chromatin silencing') --- !New Class!: http://www.geneontology.org/go#GO_0039604 label: suppression by virus of host translation + SubClassOf('suppression by virus of host translation' 'suppression by virus of host gene expression') + SubClassOf('suppression by virus of host translation' 'modulation by virus of host translation') --- !New Class!: http://www.geneontology.org/go#GO_0072344 label: rescue of stalled ribosome + SubClassOf('rescue of stalled ribosome' 'translational elongation') + SubClassOf('rescue of stalled ribosome' 'regulation of translation') --- !New Class!: http://www.geneontology.org/go#SO_0001204 label: Phage_RNA_Polymerase_Promoter + SubClassOf('Phage_RNA_Polymerase_Promoter' 'RNA_polymerase_promoter') --- !New Class!: http://www.geneontology.org/go#span_ConnectedTemporalRegion label: connected_temporal_region + SubClassOf('connected_temporal_region' 'temporal_region') + DisjointClasses('connected_temporal_region' 'scattered_temporal_region') + EquivalentClasses('connected_temporal_region' ObjectUnionOf('temporal_instant' 'temporal_interval') ) --- !New Class!: http://www.geneontology.org/go#GO_0045895 label: positive regulation of mating-type specific transcription, DNA-dependent + SubClassOf('positive regulation of mating-type specific transcription, DNA-dependent' 'regulation of mating-type specific transcription, DNA-dependent') + SubClassOf('positive regulation of mating-type specific transcription, DNA-dependent' 'positive regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0007073 label: positive regulation of transcription on exit from mitosis, from RNA polymerase I promoter + SubClassOf('positive regulation of transcription on exit from mitosis, from RNA polymerase I promoter' 'positive regulation of transcription on exit from mitosis') --- !New Class!: http://www.geneontology.org/go#OMIT_0000156 label: PapillaryFibroelastoma + SubClassOf('PapillaryFibroelastoma' 'ConnectiveOrigin') --- !New Class!: http://www.geneontology.org/go#GO_0000969 label: tRNA exon ligation utilizing ATP as source of linkage phosphate + SubClassOf('tRNA exon ligation utilizing ATP as source of linkage phosphate' 'tRNA exon ligation') --- !New Class!: http://www.geneontology.org/go#GO_0010628 label: positive regulation of gene expression + SubClassOf('positive regulation of gene expression' 'regulation of gene expression') + EquivalentClasses('positive regulation of gene expression' ObjectSomeValueFrom('positively_regulates' 'gene expression') ) + SubClassOf('positive regulation of gene expression' ObjectSomeValueFrom('positively_regulates' 'gene expression')) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_32525 label: Theria + SubClassOf('Theria' 'Mammalia') --- !New Class!: http://www.geneontology.org/go#GO_0010672 label: regulation of transcription from RNA polymerase II promoter during meiosis + SubClassOf('regulation of transcription from RNA polymerase II promoter during meiosis' 'regulation of transcription during meiosis') + SubClassOf('regulation of transcription from RNA polymerase II promoter during meiosis' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#SO_0001237 label: amino_acid + SubClassOf('amino_acid' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0032792 label: negative regulation of CREB transcription factor activity + SubClassOf('negative regulation of CREB transcription factor activity' 'negative regulation of sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0001176 label: transcriptional start site selection at bacterial-type RNA polymerase promoter + SubClassOf('transcriptional start site selection at bacterial-type RNA polymerase promoter' 'DNA-dependent transcriptional start site selection') + SubClassOf('transcriptional start site selection at bacterial-type RNA polymerase promoter' ObjectSomeValueFrom('part_of' 'transcription initiation from bacterial-type RNA polymerase promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0008176 label: tRNA (guanine-N7-)-methyltransferase activity + SubClassOf('tRNA (guanine-N7-)-methyltransferase activity' 'tRNA (guanine) methyltransferase activity') + SubClassOf('tRNA (guanine-N7-)-methyltransferase activity' ObjectSomeValueFrom('part_of' 'RNA (guanine-N7)-methylation')) --- !New Class!: http://www.geneontology.org/go#GO_0001078 label: RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription + SubClassOf('RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' 'RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity') + SubClassOf('RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' 'RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription') --- !New Class!: http://www.geneontology.org/go#GO_0061432 label: regulation of transcription from RNA polymerase II promoter in response to methionine + SubClassOf('regulation of transcription from RNA polymerase II promoter in response to methionine' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0051037 label: regulation of transcription during meiosis + EquivalentClasses('regulation of transcription, DNA-dependent' 'regulation of transcription during meiosis' ) + SubClassOf('regulation of transcription during meiosis' 'regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0060633 label: negative regulation of transcription initiation from RNA polymerase II promoter + SubClassOf('negative regulation of transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription initiation from RNA polymerase II promoter')) + EquivalentClasses('negative regulation of transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription initiation from RNA polymerase II promoter') ) + SubClassOf('negative regulation of transcription initiation from RNA polymerase II promoter' 'regulation of transcription initiation from RNA polymerase II promoter') + SubClassOf('negative regulation of transcription initiation from RNA polymerase II promoter' 'negative regulation of DNA-dependent transcription, initiation') --- !New Class!: http://www.geneontology.org/go#GO_1901837 label: negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter + SubClassOf('negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' 'regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter') + SubClassOf('negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter')) + EquivalentClasses('negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter') ) + SubClassOf('negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' 'negative regulation of transcription from RNA polymerase I promoter') --- !New Class!: http://www.geneontology.org/go#OMIT_0000363 label: Penis + SubClassOf('Penis' 'MaleReproductiveSystem') --- !New Class!: http://www.geneontology.org/go#OMIT_0000262 label: CarotidArtery + SubClassOf('CarotidArtery' 'Artery') --- !New Class!: http://www.geneontology.org/go#SO_0000088 label: mt_gene + SubClassOf('mt_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#SO_0001641 label: lincRNA_gene + SubClassOf('lincRNA_gene' 'ncRNA_gene') --- !New Class!: http://www.geneontology.org/go#SO_0000129 label: gene_silenced_by_DNA_methylation + SubClassOf('gene_silenced_by_DNA_methylation' 'gene_silenced_by_DNA_modification') --- !New Class!: http://www.geneontology.org/go#GO_0034225 label: regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation + SubClassOf('regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#OMIT_0000176 label: EssentialThrombocytosis + SubClassOf('EssentialThrombocytosis' 'ChronicMyeloproliferativeDisorders') --- !New Class!: http://www.geneontology.org/go#GO_0000479 label: endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) + SubClassOf('endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'endonucleolytic cleavage involved in rRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_1901148 label: gene expression involved in extracellular matrix organization + SubClassOf('gene expression involved in extracellular matrix organization' 'gene expression') + EquivalentClasses('gene expression' 'gene expression involved in extracellular matrix organization' ) --- !New Class!: http://www.geneontology.org/go#GO_0085034 label: negative regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade + SubClassOf('negative regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade' 'negative regulation of I-kappaB kinase/NF-kappaB cascade') --- !New Class!: http://www.geneontology.org/go#GO_0043634 label: polyadenylation-dependent ncRNA catabolic process + SubClassOf('polyadenylation-dependent ncRNA catabolic process' ObjectSomeValueFrom('has_part' 'ncRNA polyadenylation')) --- !New Class!: http://www.geneontology.org/go#GO_0016457 label: dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome + SubClassOf('dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome' 'dosage compensation complex assembly') + EquivalentClasses('dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome' ObjectIntersectionOf('dosage compensation complex assembly' ObjectSomeValueFrom('part_of' 'dosage compensation by hyperactivation of X chromosome')) ) + SubClassOf('dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome' ObjectSomeValueFrom('part_of' 'dosage compensation by hyperactivation of X chromosome')) --- !New Class!: http://www.geneontology.org/go#GO_0034230 label: enkephalin processing + SubClassOf('enkephalin processing' 'peptide hormone processing') --- !New Class!: http://www.geneontology.org/go#GO_0038049 label: ligand-activated RNA polymerase II transcription factor binding transcription factor activity + SubClassOf('ligand-activated RNA polymerase II transcription factor binding transcription factor activity' 'RNA polymerase II transcription factor binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0044226 label: basal pole of neuron + SubClassOf('basal pole of neuron' ObjectSomeValueFrom('part_of' 'neuronal cell body')) + SubClassOf('basal pole of neuron' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0048788 label: presynaptic cytoskeletal matrix assembled at active zones + SubClassOf('presynaptic cytoskeletal matrix assembled at active zones' 'neuron part') + EquivalentClasses('presynaptic cytoskeletal matrix assembled at active zones' ObjectSomeValueFrom('part_of' 'presynaptic active zone') ) + SubClassOf('presynaptic cytoskeletal matrix assembled at active zones' ObjectSomeValueFrom('part_of' 'presynaptic active zone')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000244 label: AnatomicFeature + SubClassOf('AnatomicFeature' 'object') --- !New Class!: http://www.geneontology.org/go#GO_0090310 label: negative regulation of methylation-dependent chromatin silencing + SubClassOf('negative regulation of methylation-dependent chromatin silencing' ObjectSomeValueFrom('negatively_regulates' 'methylation-dependent chromatin silencing')) + SubClassOf('negative regulation of methylation-dependent chromatin silencing' 'regulation of methylation-dependent chromatin silencing') + EquivalentClasses('negative regulation of methylation-dependent chromatin silencing' ObjectSomeValueFrom('negatively_regulates' 'methylation-dependent chromatin silencing') ) + SubClassOf('negative regulation of methylation-dependent chromatin silencing' 'negative regulation of chromatin silencing') --- !New Class!: http://www.geneontology.org/go#GO_0004808 label: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity + SubClassOf('tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity' 'tRNA methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0006363 label: termination of RNA polymerase I transcription + SubClassOf('termination of RNA polymerase I transcription' 'DNA-dependent transcription, termination') + SubClassOf('termination of RNA polymerase I transcription' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter')) --- !New Class!: http://www.geneontology.org/go#GO_1900393 label: regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0033401 label: UUU codon-amino acid adaptor activity + SubClassOf('UUU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0075523 label: viral translational frameshifting + SubClassOf('viral translational frameshifting' ObjectSomeValueFrom('part_of' 'viral translation')) + SubClassOf('viral translational frameshifting' 'translational frameshifting') --- !New Class!: http://www.geneontology.org/go#OMIT_0000234 label: ImmunosuppressiveTherapy + SubClassOf('ImmunosuppressiveTherapy' 'PharmaceuticalTreatment') --- !New Class!: http://www.geneontology.org/go#GO_0006418 label: tRNA aminoacylation for protein translation + SubClassOf('tRNA aminoacylation for protein translation' ObjectSomeValueFrom('part_of' 'translation')) --- !New Class!: http://www.geneontology.org/go#SO_0000234 label: mRNA + SubClassOf('mRNA' 'mature_transcript') --- !New Class!: http://www.geneontology.org/go#OMIT_0000132 label: GeneDeficiencyDisorder + SubClassOf('GeneDeficiencyDisorder' 'GeneticDisease') --- !New Class!: http://www.geneontology.org/go#GO_0001110 label: promoter clearance from RNA polymerase III promoter + SubClassOf('promoter clearance from RNA polymerase III promoter' 'promoter clearance during DNA-dependent transcription') + SubClassOf('promoter clearance from RNA polymerase III promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000133 label: Bacteriallnfection + SubClassOf('Bacteriallnfection' 'Infection') --- !New Class!: http://www.geneontology.org/go#GO_0044300 label: cerebellar mossy fiber + SubClassOf('cerebellar mossy fiber' 'axon') --- !New Class!: http://www.geneontology.org/go#OMIT_0000288 label: IliacVein + SubClassOf('IliacVein' 'Vein') --- !New Class!: http://www.geneontology.org/go#GO_2000639 label: negative regulation of SREBP signaling pathway + SubClassOf('negative regulation of SREBP signaling pathway' 'regulation of SREBP signaling pathway') + EquivalentClasses('negative regulation of SREBP signaling pathway' ObjectSomeValueFrom('negatively_regulates' 'SREBP signaling pathway') ) + SubClassOf('negative regulation of SREBP signaling pathway' ObjectSomeValueFrom('negatively_regulates' 'SREBP signaling pathway')) --- !New Class!: http://www.geneontology.org/go#GO_0090203 label: transcriptional activation by promoter-terminator looping + SubClassOf('transcriptional activation by promoter-terminator looping' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0000967 label: rRNA 5'-end processing + SubClassOf('rRNA 5'-end processing' 'ncRNA 5'-end processing') --- !New Class!: http://www.geneontology.org/go#SO_0000889 label: paternally_imprinted_gene + SubClassOf('paternally_imprinted_gene' 'epigenetically_modified_gene') --- !New Class!: http://www.geneontology.org/go#GO_0021918 label: regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment' 'regulation of transcription involved in cell fate commitment') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment' ) --- !New Class!: http://www.geneontology.org/go#GO_0001201 label: metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity + SubClassOf('metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity' 'RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity') + SubClassOf('metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity' 'metal ion regulated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0043045 label: DNA methylation involved in embryo development + EquivalentClasses('DNA methylation' 'DNA methylation involved in embryo development' ) + SubClassOf('DNA methylation involved in embryo development' 'DNA methylation') --- !New Class!: http://www.geneontology.org/go#OMIT_0000281 label: AorticValve + SubClassOf('AorticValve' 'Valves') --- !New Class!: http://www.geneontology.org/go#GO_0045727 label: positive regulation of translation + SubClassOf('positive regulation of translation' ObjectSomeValueFrom('positively_regulates' 'translation')) + EquivalentClasses('positive regulation of translation' ObjectSomeValueFrom('positively_regulates' 'translation') ) + SubClassOf('positive regulation of translation' 'regulation of translation') --- !New Class!: http://www.geneontology.org/go#GO_0052915 label: 23S rRNA (guanine(2445)-N(2))-methyltransferase activity + SubClassOf('23S rRNA (guanine(2445)-N(2))-methyltransferase activity' 'rRNA (guanine-N2-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0070868 label: heterochromatin organization involved in chromatin silencing + SubClassOf('heterochromatin organization involved in chromatin silencing' ObjectSomeValueFrom('part_of' 'chromatin silencing')) + EquivalentClasses('heterochromatin organization involved in chromatin silencing' ObjectSomeValueFrom('part_of' 'chromatin silencing') ) --- !New Class!: http://www.geneontology.org/go#GO_0000083 label: regulation of transcription involved in G1/S transition of mitotic cell cycle + SubClassOf('regulation of transcription involved in G1/S transition of mitotic cell cycle' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription involved in G1/S transition of mitotic cell cycle' 'regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#SO_0000280 label: engineered_gene + SubClassOf('engineered_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0000466 label: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) + SubClassOf('maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'maturation of 5.8S rRNA') --- !New Class!: http://www.geneontology.org/go#GO_0034475 label: U4 snRNA 3'-end processing + SubClassOf('U4 snRNA 3'-end processing' 'snRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#GO_0061434 label: regulation of replicative cell aging by regulation of transcription from RNA polymerase II promoter in response to caloric restriction + SubClassOf('regulation of replicative cell aging by regulation of transcription from RNA polymerase II promoter in response to caloric restriction' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0071038 label: nuclear polyadenylation-dependent tRNA catabolic process + SubClassOf('nuclear polyadenylation-dependent tRNA catabolic process' 'nuclear polyadenylation-dependent ncRNA catabolic process') --- !New Class!: http://www.geneontology.org/go#SO_0000816 label: rescue_gene + SubClassOf('rescue_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#SO_0005836 label: regulatory_region + SubClassOf('regulatory_region' 'gene_member_region') --- !New Class!: http://www.geneontology.org/go#GO_0001177 label: regulation of transcriptional open complex formation at RNA polymerase II promoter + EquivalentClasses('regulation of transcriptional open complex formation at RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcriptional open complex formation at RNA polymerase II promoter') ) + SubClassOf('regulation of transcriptional open complex formation at RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcriptional open complex formation at RNA polymerase II promoter')) + SubClassOf('regulation of transcriptional open complex formation at RNA polymerase II promoter' 'regulation of transcription initiation from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0097467 label: type III terminal bouton + SubClassOf('type III terminal bouton' 'terminal bouton') --- !New Class!: http://www.geneontology.org/go#GO_0001192 label: maintenance of transcriptional fidelity during DNA-dependent transcription elongation + SubClassOf('maintenance of transcriptional fidelity during DNA-dependent transcription elongation' ObjectSomeValueFrom('part_of' 'DNA-dependent transcription, elongation')) --- !New Class!: http://www.geneontology.org/go#GO_0033438 label: ACC codon-amino acid adaptor activity + SubClassOf('ACC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0001065 label: mitochondrial single subunit type RNA polymerase activity + SubClassOf('mitochondrial single subunit type RNA polymerase activity' ObjectSomeValueFrom('part_of' 'transcription from mitochondrial promoter')) --- !New Class!: http://www.geneontology.org/go#SO_0000655 label: ncRNA + SubClassOf('ncRNA' 'mature_transcript') --- !New Class!: http://www.geneontology.org/go#CHEBI_33708 label: amino-acid residue + SubClassOf('amino-acid residue' 'fiat object') --- !New Class!: http://www.geneontology.org/go#GO_0039549 label: suppression by virus of host IRF3 activity by inhibition of IRF3 phosphorylation + SubClassOf('suppression by virus of host IRF3 activity by inhibition of IRF3 phosphorylation' 'suppression by virus of host IRF3 activity') --- !New Class!: http://www.geneontology.org/go#GO_1901213 label: regulation of transcription from RNA polymerase II promoter involved in heart development + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in heart development' ) + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in heart development' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0090308 label: regulation of methylation-dependent chromatin silencing + SubClassOf('regulation of methylation-dependent chromatin silencing' 'regulation of chromatin silencing') + SubClassOf('regulation of methylation-dependent chromatin silencing' ObjectSomeValueFrom('regulates' 'methylation-dependent chromatin silencing')) + EquivalentClasses('regulation of methylation-dependent chromatin silencing' ObjectSomeValueFrom('regulates' 'methylation-dependent chromatin silencing') ) --- !New Class!: http://www.geneontology.org/go#SO_0000617 label: RNApol_III_promoter_type_1 + SubClassOf('RNApol_III_promoter_type_1' 'RNApol_III_promoter') --- !New Class!: http://www.geneontology.org/go#GO_0009008 label: DNA-methyltransferase activity + SubClassOf('DNA-methyltransferase activity' ObjectSomeValueFrom('part_of' 'DNA methylation')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000341 label: Cerebellum + SubClassOf('Cerebellum' 'Brain') --- !New Class!: http://www.geneontology.org/go#GO_1990141 label: chromatin silencing at centromere outer repeat region + SubClassOf('chromatin silencing at centromere outer repeat region' 'chromatin silencing at centromere') --- !New Class!: http://www.geneontology.org/go#GO_0000464 label: endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) + SubClassOf('endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)') + SubClassOf('endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) + SubClassOf('endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) --- !New Class!: http://www.geneontology.org/go#GO_0034982 label: mitochondrial protein processing + SubClassOf('mitochondrial protein processing' 'protein processing') --- !New Class!: http://www.geneontology.org/go#GO_0010691 label: negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to nutrient levels + SubClassOf('negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to nutrient levels' 'negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0070870 label: heterochromatin maintenance involved in chromatin silencing + SubClassOf('heterochromatin maintenance involved in chromatin silencing' 'heterochromatin organization involved in chromatin silencing') + EquivalentClasses('heterochromatin maintenance involved in chromatin silencing' ObjectSomeValueFrom('part_of' 'chromatin silencing') ) --- !New Class!: http://www.geneontology.org/go#GO_0070155 label: mitochondrial methionyl-tRNA aminoacylation + EquivalentClasses('methionyl-tRNA aminoacylation' 'mitochondrial methionyl-tRNA aminoacylation' ) + SubClassOf('mitochondrial methionyl-tRNA aminoacylation' 'methionyl-tRNA aminoacylation') + SubClassOf('mitochondrial methionyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') --- !New Class!: http://www.geneontology.org/go#GO_1900475 label: positive regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter' 'regulation of meiosis by regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'positive regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0005623 label: cell + SubClassOf('cell' 'cellular_component') + SubClassOf('cell' ObjectSomeValueFrom('geneExpressedln' 'candidate_gene')) --- !New Class!: http://www.geneontology.org/go#GO_0042346 label: positive regulation of NF-kappaB import into nucleus + SubClassOf('positive regulation of NF-kappaB import into nucleus' 'regulation of NF-kappaB import into nucleus') + EquivalentClasses('positive regulation of NF-kappaB import into nucleus' ObjectSomeValueFrom('positively_regulates' 'NF-kappaB import into nucleus') ) + SubClassOf('positive regulation of NF-kappaB import into nucleus' ObjectSomeValueFrom('positively_regulates' 'NF-kappaB import into nucleus')) --- !New Class!: http://www.geneontology.org/go#GO_0043631 label: RNA polyadenylation + SubClassOf('RNA polyadenylation' 'RNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#GO_1900463 label: negative regulation of cellular response to alkalinity by negative regulation of transcription from RNA polymerase II promoter + SubClassOf('negative regulation of cellular response to alkalinity by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cellular response to alkalinity by negative regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0006354 label: DNA-dependent transcription, elongation + SubClassOf('DNA-dependent transcription, elongation' ObjectSomeValueFrom('part_of' 'transcription, DNA-dependent')) --- !New Class!: http://www.geneontology.org/go#GO_0001214 label: metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in negative regulation of transcription + SubClassOf('metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in negative regulation of transcription' 'RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription') + SubClassOf('metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in negative regulation of transcription' 'metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0000380 label: alternative mRNA splicing, via spliceosome + SubClassOf('alternative mRNA splicing, via spliceosome' 'mRNA splicing, via spliceosome') --- !New Class!: http://www.geneontology.org/go#OMIT_0000061 label: Thrombocyte + SubClassOf('Thrombocyte' 'ConnectiveTissueCell') --- !New Class!: http://www.geneontology.org/go#GO_0051090 label: regulation of sequence-specific DNA binding transcription factor activity + SubClassOf('regulation of sequence-specific DNA binding transcription factor activity' ObjectSomeValueFrom('regulates' 'sequence-specific DNA binding transcription factor activity')) + EquivalentClasses('regulation of sequence-specific DNA binding transcription factor activity' ObjectSomeValueFrom('regulates' 'sequence-specific DNA binding transcription factor activity') ) + SubClassOf('regulation of sequence-specific DNA binding transcription factor activity' 'regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0071891 label: N-terminal peptidyl-proline dimethylation involved in translation + EquivalentClasses('N-terminal peptidyl-proline dimethylation involved in translation' ObjectSomeValueFrom('part_of' 'translation') ) + SubClassOf('N-terminal peptidyl-proline dimethylation involved in translation' ObjectSomeValueFrom('part_of' 'translation')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000122 label: Disease + SubClassOf('Disease' 'process_aggregate') + SubClassOf('Disease' ObjectSomeValueFrom('affects' 'AnatomicFeature')) + SubClassOf('Disease' ObjectSomeValueFrom('causedBy' 'HarmfulRole')) + SubClassOf('Disease' ObjectSomeValueFrom('treatedBy' 'Treatment')) --- !New Class!: http://www.geneontology.org/go#GO_0033439 label: ACA codon-amino acid adaptor activity + SubClassOf('ACA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000349 label: PeripheralNerves + SubClassOf('PeripheralNerves' 'SomaticNervousSystem') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_314147 label: Glires + SubClassOf('Glires' 'Euarchontoglires') --- !New Class!: http://www.geneontology.org/go#OMIT_0000121 label: TumorMetastasis + SubClassOf('TumorMetastasis' 'PathologicalEvent') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_117570 label: Teleostomi + SubClassOf('Teleostomi' 'Gnathostomata') --- !New Class!: http://www.geneontology.org/go#GO_0044629 label: negative regulation of complement activation, classical pathway in other organism + SubClassOf('negative regulation of complement activation, classical pathway in other organism' 'negative regulation of complement activation, classical pathway') + SubClassOf('negative regulation of complement activation, classical pathway in other organism' 'modulation of complement activation, classical pathway in other organism') --- !New Class!: http://www.geneontology.org/go#GO_0001151 label: bacterial-type RNA polymerase transcription enhancer sequence-specific DNA binding transcription factor activity + SubClassOf('bacterial-type RNA polymerase transcription enhancer sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000139 label: PreTumor + SubClassOf('PreTumor' 'Neoplasia') --- !New Class!: http://www.geneontology.org/go#GO_0045894 label: negative regulation of mating-type specific transcription, DNA-dependent + SubClassOf('negative regulation of mating-type specific transcription, DNA-dependent' 'regulation of mating-type specific transcription, DNA-dependent') + SubClassOf('negative regulation of mating-type specific transcription, DNA-dependent' 'negative regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0070940 label: dephosphorylation of RNA polymerase II C-terminal domain + SubClassOf('dephosphorylation of RNA polymerase II C-terminal domain' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#OMIT_0000370 label: Trachea + SubClassOf('Trachea' 'LowerRespiratoryTract') --- !New Class!: http://www.geneontology.org/go#GO_0060195 label: negative regulation of antisense RNA transcription + EquivalentClasses('negative regulation of antisense RNA transcription' ObjectSomeValueFrom('negatively_regulates' 'antisense RNA transcription') ) + SubClassOf('negative regulation of antisense RNA transcription' 'negative regulation of transcription, DNA-dependent') + SubClassOf('negative regulation of antisense RNA transcription' 'regulation of antisense RNA transcription') + SubClassOf('negative regulation of antisense RNA transcription' ObjectSomeValueFrom('negatively_regulates' 'antisense RNA transcription')) --- !New Class!: http://www.geneontology.org/go#GO_0039594 label: endoribonuclease activity involved in viral induction of host mRNA catabolic process + SubClassOf('endoribonuclease activity involved in viral induction of host mRNA catabolic process' ObjectSomeValueFrom('part_of' 'cleavage by virus of host mRNA')) --- !New Class!: http://www.geneontology.org/go#GO_0052916 label: 23S rRNA (guanine(1835)-N(2))-methyltransferase activity + SubClassOf('23S rRNA (guanine(1835)-N(2))-methyltransferase activity' 'rRNA (guanine-N2-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000297 label: Colon + SubClassOf('Colon' 'DigestiveOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0071164 label: RNA trimethylguanosine synthase activity + SubClassOf('RNA trimethylguanosine synthase activity' ObjectSomeValueFrom('part_of' '7-methylguanosine cap hypermethylation')) --- !New Class!: http://www.geneontology.org/go#GO_0001198 label: negative regulation of mating-type specific transcription from RNA polymerase II promoter + SubClassOf('negative regulation of mating-type specific transcription from RNA polymerase II promoter' 'negative regulation of mating-type specific transcription, DNA-dependent') + SubClassOf('negative regulation of mating-type specific transcription from RNA polymerase II promoter' 'regulation of mating-type specific transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0045917 label: positive regulation of complement activation + SubClassOf('positive regulation of complement activation' 'positive regulation of protein processing') + SubClassOf('positive regulation of complement activation' 'regulation of complement activation') --- !New Class!: http://www.geneontology.org/go#GO_0042796 label: snRNA transcription from RNA polymerase III promoter + SubClassOf('snRNA transcription from RNA polymerase III promoter' 'transcription from RNA polymerase III promoter') + SubClassOf('snRNA transcription from RNA polymerase III promoter' 'snRNA transcription') --- !New Class!: http://www.geneontology.org/go#GO_0006614 label: SRP-dependent cotranslational protein targeting to membrane + SubClassOf('SRP-dependent cotranslational protein targeting to membrane' ObjectSomeValueFrom('has_part' 'translation')) --- !New Class!: http://www.geneontology.org/go#GO_0001731 label: formation of translation preinitiation complex + SubClassOf('formation of translation preinitiation complex' ObjectSomeValueFrom('part_of' 'translational initiation')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000308 label: SalivaGlands + SubClassOf('SalivaGlands' 'DigestiveOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0070040 label: rRNA (adenine-C2-)-methyltransferase activity + SubClassOf('rRNA (adenine-C2-)-methyltransferase activity' 'rRNA (adenine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000293 label: VenaCava + SubClassOf('VenaCava' 'Vein') --- !New Class!: http://www.geneontology.org/go#GO_1901582 label: positive regulation of telomeric RNA transcription from RNA pol II promoter + EquivalentClasses('positive regulation of telomeric RNA transcription from RNA pol II promoter' ObjectSomeValueFrom('positively_regulates' 'telomeric RNA transcription from RNA pol II promoter') ) + SubClassOf('positive regulation of telomeric RNA transcription from RNA pol II promoter' 'regulation of telomeric RNA transcription from RNA pol II promoter') + SubClassOf('positive regulation of telomeric RNA transcription from RNA pol II promoter' 'positive regulation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of telomeric RNA transcription from RNA pol II promoter' ObjectSomeValueFrom('positively_regulates' 'telomeric RNA transcription from RNA pol II promoter')) --- !New Class!: http://www.geneontology.org/go#GO_1901487 label: negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process in response to increased oxygen levels + EquivalentClasses('negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process in response to increased oxygen levels' ObjectSomeValueFrom('results_in' 'negative regulation of SREBP signaling pathway in response to increased oxygen levels') ) + SubClassOf('negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process in response to increased oxygen levels' 'negative regulation of SREBP signaling pathway in response to increased oxygen levels') + SubClassOf('negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process in response to increased oxygen levels' 'negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process') --- !New Class!: http://www.geneontology.org/go#GO_0023019 label: signal transduction involved in regulation of gene expression + SubClassOf('signal transduction involved in regulation of gene expression' ObjectSomeValueFrom('part_of' 'regulation of gene expression')) + EquivalentClasses('signal transduction involved in regulation of gene expression' ObjectSomeValueFrom('part_of' 'regulation of gene expression') ) --- !New Class!: http://www.geneontology.org/go#GO_0060145 label: viral gene silencing in virus induced gene silencing + SubClassOf('viral gene silencing in virus induced gene silencing' 'posttranscriptional gene silencing') --- !New Class!: http://www.geneontology.org/go#GO_0000462 label: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) + SubClassOf('maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'maturation of SSU-rRNA') --- !New Class!: http://www.geneontology.org/go#GO_0009371 label: positive regulation of transcription by pheromones + SubClassOf('positive regulation of transcription by pheromones' 'positive regulation of transcription, DNA-dependent') + SubClassOf('positive regulation of transcription by pheromones' 'regulation of transcription by pheromones') --- !New Class!: http://www.geneontology.org/go#GO_2000144 label: positive regulation of DNA-dependent transcription, initiation + SubClassOf('positive regulation of DNA-dependent transcription, initiation' ObjectSomeValueFrom('positively_regulates' 'DNA-dependent transcription, initiation')) + SubClassOf('positive regulation of DNA-dependent transcription, initiation' 'positive regulation of transcription, DNA-dependent') + SubClassOf('positive regulation of DNA-dependent transcription, initiation' 'regulation of DNA-dependent transcription, initiation') + EquivalentClasses('positive regulation of DNA-dependent transcription, initiation' ObjectSomeValueFrom('positively_regulates' 'DNA-dependent transcription, initiation') ) --- !New Class!: http://www.geneontology.org/go#GO_0001173 label: DNA-dependent transcriptional start site selection + SubClassOf('DNA-dependent transcriptional start site selection' ObjectSomeValueFrom('part_of' 'DNA-dependent transcription, initiation')) --- !New Class!: http://www.geneontology.org/go#snap_GenericallyDependentContinuant label: generically_dependent_continuant + DisjointClasses('generically_dependent_continuant' 'specifically_dependent_continuant') + SubClassOf('generically_dependent_continuant' 'dependent_continuant') --- !New Class!: http://www.geneontology.org/go#GO_0009386 label: translational attenuation + SubClassOf('translational attenuation' 'regulation of translation') --- !New Class!: http://www.geneontology.org/go#GO_0001038 label: RNA polymerase III hybrid type promoter TFIIIB recruiting transcription factor activity + SubClassOf('RNA polymerase III hybrid type promoter TFIIIB recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III hybrid type promoter transcriptional preinitiation complex assembly')) + SubClassOf('RNA polymerase III hybrid type promoter TFIIIB recruiting transcription factor activity' 'RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000231 label: AntihyperlipidemicTreatment + SubClassOf('AntihyperlipidemicTreatment' 'PharmaceuticalTreatment') --- !New Class!: http://www.geneontology.org/go#GO_0070475 label: rRNA base methylation + SubClassOf('rRNA base methylation' 'rRNA methylation') --- !New Class!: http://www.geneontology.org/go#OMIT_0000055 label: EpithelialTissueCell + SubClassOf('EpithelialTissueCell' 'cell') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_376912 label: Tarsiiformes + SubClassOf('Tarsiiformes' 'Haplorrhini') --- !New Class!: http://www.geneontology.org/go#GO_0071951 label: conversion of methionyl-tRNA to N-formyl-methionyl-tRNA + SubClassOf('conversion of methionyl-tRNA to N-formyl-methionyl-tRNA' 'charged-tRNA amino acid modification') --- !New Class!: http://www.geneontology.org/go#SO_0001695 label: restriction_enzyme_single_strand_overhang + SubClassOf('restriction_enzyme_single_strand_overhang' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0032258 label: CVT pathway + SubClassOf('CVT pathway' ObjectSomeValueFrom('has_part' 'vacuolar protein processing')) --- !New Class!: http://www.geneontology.org/go#GO_0075527 label: viral RNA editing + SubClassOf('viral RNA editing' ObjectSomeValueFrom('part_of' 'viral transcription')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000263 label: FemoralArtery + SubClassOf('FemoralArtery' 'Artery') --- !New Class!: http://www.geneontology.org/go#GO_0006390 label: transcription from mitochondrial promoter + EquivalentClasses('transcription, DNA-dependent' 'transcription from mitochondrial promoter' ) + SubClassOf('transcription from mitochondrial promoter' 'transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#PR_000000001 label: protein + SubClassOf('protein' ObjectSomeValueFrom('regulateProtein' 'miRNA')) + SubClassOf('protein' 'amino acid chain') --- !New Class!: http://www.geneontology.org/go#GO_0001193 label: maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase II promoter + SubClassOf('maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase II promoter' 'maintenance of transcriptional fidelity during DNA-dependent transcription elongation') + SubClassOf('maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase II promoter' ObjectSomeValueFrom('part_of' 'transcription elongation from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0035514 label: DNA demethylase activity + SubClassOf('DNA demethylase activity' ObjectSomeValueFrom('part_of' 'DNA demethylation')) --- !New Class!: http://www.geneontology.org/go#SO_0001643 label: telomerase_RNA_gene + SubClassOf('telomerase_RNA_gene' 'ncRNA_gene') --- !New Class!: http://www.geneontology.org/go#GO_0021909 label: regulation of transcription from RNA polymerase II promoter involved in spinal cord anterior-posterior patterning + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in spinal cord anterior-posterior patterning' ) + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in spinal cord anterior-posterior patterning' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_1990096 label: positive regulation of transcription from RNA polymerase II promoter in response to superoxide + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to superoxide' 'positive regulation of transcription from RNA polymerase II promoter in response to reactive oxygen species') --- !New Class!: http://www.geneontology.org/go#OMIT_0000063 label: Granulocyte + SubClassOf('Granulocyte' 'Leukocyte') --- !New Class!: http://www.geneontology.org/go#GO_0000453 label: enzyme-directed rRNA 2'-O-methylation + SubClassOf('enzyme-directed rRNA 2'-O-methylation' 'rRNA 2'-O-methylation') --- !New Class!: http://www.geneontology.org/go#GO_0006616 label: SRP-dependent cotranslational protein targeting to membrane, translocation + SubClassOf('SRP-dependent cotranslational protein targeting to membrane, translocation' ObjectSomeValueFrom('part_of' 'SRP-dependent cotranslational protein targeting to membrane')) --- !New Class!: http://www.geneontology.org/go#GO_0002098 label: tRNA wobble uridine modification + EquivalentClasses('tRNA wobble uridine modification' 'mitochondrial tRNA wobble uridine modification' ) + SubClassOf('tRNA wobble uridine modification' 'tRNA wobble base modification') --- !New Class!: http://www.geneontology.org/go#GO_1900176 label: negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry + SubClassOf('negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry') + SubClassOf('negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'negative regulation of nodal signaling pathway involved in determination of left/right asymmetry') + SubClassOf('negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' ObjectSomeValueFrom('negatively_regulates' 'nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry')) + EquivalentClasses('negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' ObjectSomeValueFrom('negatively_regulates' 'nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry') ) --- !New Class!: http://www.geneontology.org/go#GO_0001088 label: TFIIE-class binding transcription factor activity + SubClassOf('TFIIE-class binding transcription factor activity' 'RNA polymerase II basal transcription factor binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0001182 label: promoter clearance from RNA polymerase I promoter + SubClassOf('promoter clearance from RNA polymerase I promoter' 'promoter clearance during DNA-dependent transcription') + SubClassOf('promoter clearance from RNA polymerase I promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0030698 label: 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity + SubClassOf('5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity' 'tRNA (m5U54) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0000350 label: generation of catalytic spliceosome for second transesterification step + SubClassOf('generation of catalytic spliceosome for second transesterification step' ObjectSomeValueFrom('part_of' 'spliceosomal conformational changes to generate catalytic conformation')) --- !New Class!: http://www.geneontology.org/go#SO_0000888 label: maternally_imprinted_gene + SubClassOf('maternally_imprinted_gene' 'epigenetically_modified_gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000084 label: OncoGeneratingMiRNA + SubClassOf('OncoGeneratingMiRNA' 'miRNA') --- !New Class!: http://www.geneontology.org/go#GO_0009299 label: mRNA transcription + SubClassOf('mRNA transcription' 'transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0039599 label: cleavage by virus of host mRNA + SubClassOf('cleavage by virus of host mRNA' 'mRNA cleavage') --- !New Class!: http://www.geneontology.org/go#GO_0042779 label: tRNA 3'-trailer cleavage + SubClassOf('tRNA 3'-trailer cleavage' 'tRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#snap_OneDimensionalRegion label: one_dimensional_region + DisjointClasses('one_dimensional_region' 'zero_dimensional_region') + SubClassOf('one_dimensional_region' 'spatial_region') + DisjointClasses('one_dimensional_region' 'two_dimensional_region') + DisjointClasses('one_dimensional_region' 'three_dimensional_region') --- !New Class!: http://www.geneontology.org/go#GO_0006438 label: valyl-tRNA aminoacylation + EquivalentClasses('valyl-tRNA aminoacylation' 'mitochondrial valyl-tRNA aminoacylation' ) + EquivalentClasses('valyl-tRNA aminoacylation' 'cytosolic valyl-tRNA aminoacylation' ) + SubClassOf('valyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- !New Class!: http://www.geneontology.org/go#SO_0000898 label: epigenetically_modified_gene + SubClassOf('epigenetically_modified_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_207245 label: Fornicata + SubClassOf('Fornicata' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#OMIT_0000362 label: Epididymis + SubClassOf('Epididymis' 'MaleReproductiveSystem') --- !New Class!: http://www.geneontology.org/go#GO_0033417 label: CUU codon-amino acid adaptor activity + SubClassOf('CUU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0090052 label: regulation of chromatin silencing at centromere + SubClassOf('regulation of chromatin silencing at centromere' ObjectSomeValueFrom('regulates' 'chromatin silencing at centromere')) + EquivalentClasses('regulation of chromatin silencing at centromere' ObjectSomeValueFrom('regulates' 'chromatin silencing at centromere') ) + SubClassOf('regulation of chromatin silencing at centromere' 'regulation of chromatin silencing') --- !New Class!: http://www.geneontology.org/go#GO_0000386 label: second spliceosomal transesterification activity + SubClassOf('second spliceosomal transesterification activity' ObjectSomeValueFrom('part_of' 'RNA splicing, via transesterification reactions')) --- !New Class!: http://www.geneontology.org/go#GO_0007549 label: dosage compensation + SubClassOf('dosage compensation' 'regulation of gene expression, epigenetic') --- !New Class!: http://www.geneontology.org/go#SO_0000387 label: RprA_RNA + SubClassOf('RprA_RNA' 'small_regulatory_ncRNA') --- !New Class!: http://www.geneontology.org/go#GO_0030533 label: triplet codon-amino acid adaptor activity + SubClassOf('triplet codon-amino acid adaptor activity' ObjectSomeValueFrom('part_of' 'translation')) --- !New Class!: http://www.geneontology.org/go#SO_0000389 label: spot_42_RNA + SubClassOf('spot_42_RNA' 'small_regulatory_ncRNA') --- !New Class!: http://www.geneontology.org/go#OMIT_0000034 label: LowTemperature + SubClassOf('LowTemperature' 'Temperature') --- !New Class!: http://www.geneontology.org/go#GO_2000143 label: negative regulation of DNA-dependent transcription, initiation + EquivalentClasses('negative regulation of DNA-dependent transcription, initiation' ObjectSomeValueFrom('negatively_regulates' 'DNA-dependent transcription, initiation') ) + SubClassOf('negative regulation of DNA-dependent transcription, initiation' ObjectSomeValueFrom('negatively_regulates' 'DNA-dependent transcription, initiation')) + SubClassOf('negative regulation of DNA-dependent transcription, initiation' 'negative regulation of transcription, DNA-dependent') + SubClassOf('negative regulation of DNA-dependent transcription, initiation' 'regulation of DNA-dependent transcription, initiation') --- !New Class!: http://www.geneontology.org/go#SO_0000722 label: gene_with_dicistronic_mRNA + SubClassOf('gene_with_dicistronic_mRNA' 'gene_with_dicistronic_transcript') --- !New Class!: http://www.geneontology.org/go#GO_0001195 label: maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase III promoter + SubClassOf('maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase III promoter' 'maintenance of transcriptional fidelity during DNA-dependent transcription elongation') + SubClassOf('maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase III promoter' ObjectSomeValueFrom('part_of' 'transcription elongation from RNA polymerase III promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0044301 label: climbing fiber + SubClassOf('climbing fiber' 'axon') --- !New Class!: http://www.geneontology.org/go#OMIT_0000030 label: HighPressure + SubClassOf('HighPressure' 'Pressure') --- !New Class!: http://www.geneontology.org/go#GO_0031938 label: regulation of chromatin silencing at telomere + SubClassOf('regulation of chromatin silencing at telomere' ObjectSomeValueFrom('regulates' 'chromatin silencing at telomere')) + EquivalentClasses('regulation of chromatin silencing at telomere' ObjectSomeValueFrom('regulates' 'chromatin silencing at telomere') ) + SubClassOf('regulation of chromatin silencing at telomere' 'regulation of chromatin silencing') --- !New Class!: http://www.geneontology.org/go#snap_FiatObjectPart label: fiat_object_part + DisjointClasses('fiat_object_part' 'object_aggregate') + DisjointClasses('fiat_object_part' 'object_boundary') + DisjointClasses('fiat_object_part' 'object') + SubClassOf('fiat_object_part' 'material_entity') + DisjointClasses('fiat_object_part' 'site') --- !New Class!: http://www.geneontology.org/go#SO_0000941 label: recombinationally_rearranged_vertebrate_immune_system_gene + SubClassOf('recombinationally_rearranged_vertebrate_immune_system_gene' 'recombinationally_rearranged_gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000163 label: Hemangioma + SubClassOf('Hemangioma' 'EpithelialOrigin') --- !New Class!: http://www.geneontology.org/go#GO_0001132 label: TBP-class protein binding RNA polymerase II transcription factor activity + SubClassOf('TBP-class protein binding RNA polymerase II transcription factor activity' 'RNA polymerase II basal transcription factor binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_1900146 label: negative regulation of nodal signaling pathway involved in determination of left/right asymmetry + SubClassOf('negative regulation of nodal signaling pathway involved in determination of left/right asymmetry' ObjectSomeValueFrom('negatively_regulates' 'nodal signaling pathway involved in determination of left/right asymmetry')) + EquivalentClasses('negative regulation of nodal signaling pathway involved in determination of left/right asymmetry' ObjectSomeValueFrom('negatively_regulates' 'nodal signaling pathway involved in determination of left/right asymmetry') ) + SubClassOf('negative regulation of nodal signaling pathway involved in determination of left/right asymmetry' 'regulation of nodal signaling pathway involved in determination of left/right asymmetry') --- !New Class!: http://www.geneontology.org/go#GO_0060150 label: viral triggering of virus induced gene silencing + SubClassOf('viral triggering of virus induced gene silencing' 'positive regulation of posttranscriptional gene silencing') --- !New Class!: http://www.geneontology.org/go#GO_1902064 label: regulation of transcription from RNA polymerase II promoter involved in spermatogenesis + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in spermatogenesis' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in spermatogenesis' ) --- !New Class!: http://www.geneontology.org/go#GO_0007072 label: positive regulation of transcription on exit from mitosis + SubClassOf('positive regulation of transcription on exit from mitosis' 'positive regulation of transcription during mitosis') + EquivalentClasses('positive regulation of transcription on exit from mitosis' 'positive regulation of transcription, DNA-dependent' ) --- !New Class!: http://www.geneontology.org/go#GO_0002192 label: IRES-dependent translational initiation + SubClassOf('IRES-dependent translational initiation' 'cap-independent translational initiation') --- !New Class!: http://www.geneontology.org/go#SO_0000099 label: proviral_gene + SubClassOf('proviral_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0038098 label: sequestering of BMP from receptor via BMP binding + SubClassOf('sequestering of BMP from receptor via BMP binding' 'negative regulation of BMP signaling pathway') --- !New Class!: http://www.geneontology.org/go#GO_0044357 label: regulation of rRNA stability + SubClassOf('regulation of rRNA stability' 'regulation of RNA stability') --- !New Class!: http://www.geneontology.org/go#OMIT_0000211 label: PulmonaryAdenocarcinoma + SubClassOf('PulmonaryAdenocarcinoma' 'Carcinoma') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_117571 label: Euteleostomi + SubClassOf('Euteleostomi' 'Teleostomi') --- !New Class!: http://www.geneontology.org/go#GO_0001682 label: tRNA 5'-leader removal + SubClassOf('tRNA 5'-leader removal' 'tRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0043194 label: axon initial segment + SubClassOf('axon initial segment' ObjectSomeValueFrom('part_of' 'main axon')) + SubClassOf('axon initial segment' 'axon part') --- !New Class!: http://www.geneontology.org/go#GO_0044727 label: DNA demethylation of male pronucleus + SubClassOf('DNA demethylation of male pronucleus' 'DNA methylation involved in embryo development') + SubClassOf('DNA demethylation of male pronucleus' ObjectSomeValueFrom('part_of' 'chromatin reprogramming in the zygote')) --- !New Class!: http://www.geneontology.org/go#GO_1900224 label: positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry + EquivalentClasses('positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' ObjectSomeValueFrom('positively_regulates' 'nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry') ) + SubClassOf('positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' ObjectSomeValueFrom('positively_regulates' 'nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry')) + SubClassOf('positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry') --- !New Class!: http://www.geneontology.org/go#GO_0000454 label: snoRNA guided rRNA pseudouridine synthesis + SubClassOf('snoRNA guided rRNA pseudouridine synthesis' 'rRNA pseudouridine synthesis') --- !New Class!: http://www.geneontology.org/go#GO_0001220 label: cadmium ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription + SubClassOf('cadmium ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription' 'metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription') --- !New Class!: http://www.geneontology.org/go#GO_0000244 label: assembly of spliceosomal tri-snRNP + SubClassOf('assembly of spliceosomal tri-snRNP' ObjectSomeValueFrom('part_of' 'spliceosomal snRNP assembly')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000273 label: AscendingAorta + SubClassOf('AscendingAorta' 'Aorta') --- !New Class!: http://www.geneontology.org/go#OMIT_0000270 label: SuperiorMesentericArtery + SubClassOf('SuperiorMesentericArtery' 'Artery') --- !New Class!: http://www.geneontology.org/go#GO_0034395 label: regulation of transcription from RNA polymerase II promoter in response to iron + SubClassOf('regulation of transcription from RNA polymerase II promoter in response to iron' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0006427 label: histidyl-tRNA aminoacylation + SubClassOf('histidyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') + EquivalentClasses('histidyl-tRNA aminoacylation' 'mitochondrial histidyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#snap_Object label: object + DisjointClasses('object' 'object'Boundary) + DisjointClasses('object' 'site') + DisjointClasses('fiat_object_part' 'object') + DisjointClasses('object' 'object'Aggregate) + SubClassOf('object' 'material_entity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000194 label: HairyCellLeukemia + SubClassOf('HairyCellLeukemia' 'MatureBCellNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0031118 label: rRNA pseudouridine synthesis + SubClassOf('rRNA pseudouridine synthesis' 'rRNA modification') --- !New Class!: http://www.geneontology.org/go#SO_0000455 label: gene_with_mRNA_with_frameshift + SubClassOf('gene_with_mRNA_with_frameshift' 'protein_coding_gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000123 label: Treatment + SubClassOf('Treatment' 'process_aggregate') + SubClassOf('Treatment' ObjectSomeValueFrom('treats' 'Disease')) --- !New Class!: http://www.geneontology.org/go#GO_0006384 label: transcription initiation from RNA polymerase III promoter + SubClassOf('transcription initiation from RNA polymerase III promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter')) + SubClassOf('transcription initiation from RNA polymerase III promoter' 'DNA-dependent transcription, initiation') --- !New Class!: http://www.geneontology.org/go#GO_0015667 label: site-specific DNA-methyltransferase (cytosine-N4-specific) activity + SubClassOf('site-specific DNA-methyltransferase (cytosine-N4-specific) activity' 'DNA-methyltransferase activity') + SubClassOf('site-specific DNA-methyltransferase (cytosine-N4-specific) activity' ObjectSomeValueFrom('part_of' 'N-4 methylation of cytosine')) --- !New Class!: http://www.geneontology.org/go#GO_2000763 label: positive regulation of transcription from RNA polymerase II promoter involved in norepinephrine biosynthetic process + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in norepinephrine biosynthetic process' ) + SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in norepinephrine biosynthetic process' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0001060 label: transcription from RNA polymerase V promoter + SubClassOf('transcription from RNA polymerase V promoter' 'transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0008988 label: rRNA (adenine-N6-)-methyltransferase activity + SubClassOf('rRNA (adenine-N6-)-methyltransferase activity' 'rRNA (adenine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0035389 label: establishment of chromatin silencing at silent mating-type cassette + SubClassOf('establishment of chromatin silencing at silent mating-type cassette' 'establishment of chromatin silencing') + SubClassOf('establishment of chromatin silencing at silent mating-type cassette' ObjectSomeValueFrom('part_of' 'chromatin silencing at silent mating-type cassette')) --- !New Class!: http://www.geneontology.org/go#GO_0097201 label: negative regulation of transcription from RNA polymerase II promoter in response to stress + SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to stress' 'negative regulation of transcription from RNA polymerase II promoter') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to stress' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0045013 label: carbon catabolite repression of transcription + SubClassOf('carbon catabolite repression of transcription' 'negative regulation of transcription, DNA-dependent') + SubClassOf('carbon catabolite repression of transcription' 'carbon catabolite regulation of transcription') --- !New Class!: http://www.geneontology.org/go#GO_2000632 label: negative regulation of pre-miRNA processing + EquivalentClasses('negative regulation of pre-miRNA processing' ObjectSomeValueFrom('negatively_regulates' 'pre-miRNA processing') ) + SubClassOf('negative regulation of pre-miRNA processing' ObjectSomeValueFrom('negatively_regulates' 'pre-miRNA processing')) + SubClassOf('negative regulation of pre-miRNA processing' 'regulation of pre-miRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0001209 label: metal ion regulated sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription + SubClassOf('metal ion regulated sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' 'metal ion regulated sequence-specific DNA binding transcription factor activity') + SubClassOf('metal ion regulated sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' ObjectSomeValueFrom('part_of' 'positive regulation of transcription, DNA-dependent')) --- !New Class!: http://www.geneontology.org/go#GO_0001219 label: copper ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription + SubClassOf('copper ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription' 'metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription') --- !New Class!: http://www.geneontology.org/go#SO_0000451 label: gene_with_polyadenylated_mRNA + SubClassOf('gene_with_polyadenylated_mRNA' 'protein_coding_gene') --- !New Class!: http://www.geneontology.org/go#GO_0010467 label: gene expression + EquivalentClasses('gene expression' 'gene expression involved in extracellular matrix organization' ) + SubClassOf('gene expression' 'macromolecule metabolic process') --- !New Class!: http://www.geneontology.org/go#GO_0006465 label: signal peptide processing + SubClassOf('signal peptide processing' 'protein processing') --- !New Class!: http://www.geneontology.org/go#GO_0003700 label: sequence-specific DNA binding transcription factor activity + SubClassOf('sequence-specific DNA binding transcription factor activity' ObjectSomeValueFrom('part_of' 'regulation of transcription, DNA-dependent')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000149 label: MalignantNeoplasm + SubClassOf('MalignantNeoplasm' 'Tumor') --- !New Class!: http://www.geneontology.org/go#GO_0043685 label: conversion of glutamyl-tRNA to glutaminyl-tRNA + SubClassOf('conversion of glutamyl-tRNA to glutaminyl-tRNA' 'charged-tRNA amino acid modification') --- !New Class!: http://www.geneontology.org/go#SO_0000281 label: engineered_foreign_gene + SubClassOf('engineered_foreign_gene' 'engineered_gene') + SubClassOf('engineered_foreign_gene' 'foreign_gene') --- !New Class!: http://www.geneontology.org/go#SO_0000283 label: engineered_foreign_transposable_element_gene + SubClassOf('engineered_foreign_transposable_element_gene' 'engineered_foreign_gene') + SubClassOf('engineered_foreign_transposable_element_gene' 'transposable_element_gene') --- !New Class!: http://www.geneontology.org/go#GO_0075524 label: ribosomal skipping + SubClassOf('ribosomal skipping' ObjectSomeValueFrom('part_of' 'viral translation')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000110 label: SmoothMuscle + SubClassOf('SmoothMuscle' 'MuscleTissue') --- !New Class!: http://www.geneontology.org/go#GO_1900164 label: nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry + SubClassOf('nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'nodal signaling pathway involved in determination of left/right asymmetry') --- !New Class!: http://www.geneontology.org/go#GO_0070549 label: negative regulation of translation involved in RNA interference + SubClassOf('negative regulation of translation involved in RNA interference' 'negative regulation of translation, ncRNA-mediated') + SubClassOf('negative regulation of translation involved in RNA interference' ObjectSomeValueFrom('part_of' 'RNA interference')) + EquivalentClasses('negative regulation of translation involved in RNA interference' ObjectIntersectionOf('negative regulation of translation' ObjectSomeValueFrom('part_of' 'RNA interference')) ) --- !New Class!: http://www.geneontology.org/go#SO_0000307 label: CpG_island + SubClassOf('CpG_island' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0000410 label: negative regulation of transcription by galactose + SubClassOf('negative regulation of transcription by galactose' 'carbon catabolite repression of transcription') + SubClassOf('negative regulation of transcription by galactose' 'regulation of transcription by galactose') --- !New Class!: http://www.geneontology.org/go#OMIT_0000276 label: InterventricularSeptum + SubClassOf('InterventricularSeptum' 'Heart') --- !New Class!: http://www.geneontology.org/go#GO_0039523 label: suppression by virus of host RNA polymerase II activity + SubClassOf('suppression by virus of host RNA polymerase II activity' 'suppression by virus of host transcription') --- !New Class!: http://www.geneontology.org/go#PR_000021935 label: immature protein part + SubClassOf('immature protein part' 'fiat object') --- !New Class!: http://www.geneontology.org/go#GO_0061187 label: regulation of chromatin silencing at rDNA + EquivalentClasses('regulation of chromatin silencing at rDNA' ObjectSomeValueFrom('regulates' 'chromatin silencing at rDNA') ) + SubClassOf('regulation of chromatin silencing at rDNA' 'regulation of chromatin silencing') + SubClassOf('regulation of chromatin silencing at rDNA' ObjectSomeValueFrom('regulates' 'chromatin silencing at rDNA')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000325 label: Skin + SubClassOf('Skin' 'IntegumentaryOrgan') --- !New Class!: http://www.geneontology.org/go#OMIT_0000127 label: Infection + SubClassOf('Infection' 'Disease') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_33213 label: Bilateria + SubClassOf('Bilateria' 'Eumetazoa') --- !New Class!: http://www.geneontology.org/go#GO_1901190 label: regulation of formation of translation initiation ternary complex + SubClassOf('regulation of formation of translation initiation ternary complex' 'regulation of translational initiation') + SubClassOf('regulation of formation of translation initiation ternary complex' ObjectSomeValueFrom('regulates' 'formation of translation initiation ternary complex')) + EquivalentClasses('regulation of formation of translation initiation ternary complex' ObjectSomeValueFrom('regulates' 'formation of translation initiation ternary complex') ) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_8457 label: Sauropsida + SubClassOf('Sauropsida' 'Amniota') --- !New Class!: http://www.geneontology.org/go#OMIT_0000277 label: Valves + SubClassOf('Valves' 'Heart') --- !New Class!: http://www.geneontology.org/go#OMIT_0000074 label: GlialCell + SubClassOf('GlialCell' 'NerveTissueCell') --- !New Class!: http://www.geneontology.org/go#GO_0003434 label: BMP signaling pathway involved in growth plate cartilage chondrocyte development + SubClassOf('BMP signaling pathway involved in growth plate cartilage chondrocyte development' 'BMP signaling pathway') + EquivalentClasses('BMP signaling pathway involved in growth plate cartilage chondrocyte development' 'BMP signaling pathway' ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000187 label: NodularSclerosingHL + SubClassOf('NodularSclerosingHL' 'HodgkinLymphoma') --- !New Class!: http://www.geneontology.org/go#GO_0036261 label: 7-methylguanosine cap hypermethylation + SubClassOf('7-methylguanosine cap hypermethylation' 'RNA capping') --- !New Class!: http://www.geneontology.org/go#OMIT_0000058 label: AdiposeTissueCell + SubClassOf('AdiposeTissueCell' 'ConnectiveTissueCell') --- !New Class!: http://www.geneontology.org/go#SO_0000975 label: minicircle_gene + SubClassOf('minicircle_gene' 'kinetoplast_gene') --- !New Class!: http://www.geneontology.org/go#GO_1901408 label: negative regulation of phosphorylation of RNA polymerase II C-terminal domain + SubClassOf('negative regulation of phosphorylation of RNA polymerase II C-terminal domain' 'regulation of phosphorylation of RNA polymerase II C-terminal domain') + SubClassOf('negative regulation of phosphorylation of RNA polymerase II C-terminal domain' ObjectSomeValueFrom('negatively_regulates' 'phosphorylation of RNA polymerase II C-terminal domain')) + EquivalentClasses('negative regulation of phosphorylation of RNA polymerase II C-terminal domain' ObjectSomeValueFrom('negatively_regulates' 'phosphorylation of RNA polymerase II C-terminal domain') ) --- !New Class!: http://www.geneontology.org/go#GO_0060734 label: regulation of eIF2 alpha phosphorylation by endoplasmic reticulum stress + SubClassOf('regulation of eIF2 alpha phosphorylation by endoplasmic reticulum stress' ObjectSomeValueFrom('regulates' 'regulation of translational initiation by eIF2 alpha phosphorylation')) --- !New Class!: http://www.geneontology.org/go#GO_1900464 label: negative regulation of cellular hyperosmotic salinity response by negative regulation of transcription from RNA polymerase II promoter + SubClassOf('negative regulation of cellular hyperosmotic salinity response by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cellular hyperosmotic salinity response by negative regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0035552 label: oxidative single-stranded DNA demethylation + SubClassOf('oxidative single-stranded DNA demethylation' 'oxidative DNA demethylation') --- !New Class!: http://www.geneontology.org/go#GO_0080188 label: RNA-directed DNA methylation + SubClassOf('RNA-directed DNA methylation' 'DNA methylation') + SubClassOf('RNA-directed DNA methylation' 'gene silencing by RNA') --- !New Class!: http://www.geneontology.org/go#GO_0008616 label: queuosine biosynthetic process + SubClassOf('queuosine biosynthetic process' 'tRNA modification') --- !New Class!: http://www.geneontology.org/go#SO_0000890 label: post_translationally_regulated_gene + SubClassOf('post_translationally_regulated_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000065 label: Monocytes + SubClassOf('Monocytes' 'Agranulocyte') --- !New Class!: http://www.geneontology.org/go#GO_0001217 label: sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription + SubClassOf('sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription' ObjectSomeValueFrom('part_of' 'negative regulation of transcription, DNA-dependent')) + SubClassOf('sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription' 'sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0003256 label: regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation + EquivalentClasses('regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation' 'regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation' 'regulation of transcription from RNA polymerase II promoter involved in heart development') --- !New Class!: http://www.geneontology.org/go#GO_0007253 label: cytoplasmic sequestering of NF-kappaB + SubClassOf('cytoplasmic sequestering of NF-kappaB' 'negative regulation of NF-kappaB import into nucleus') + SubClassOf('cytoplasmic sequestering of NF-kappaB' ObjectSomeValueFrom('part_of' 'negative regulation of I-kappaB kinase/NF-kappaB cascade')) --- !New Class!: http://www.geneontology.org/go#GO_0071733 label: transcriptional activation by promoter-enhancer looping + SubClassOf('transcriptional activation by promoter-enhancer looping' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#OMIT_0000271 label: VertebralArtery + SubClassOf('VertebralArtery' 'Artery') --- !New Class!: http://www.geneontology.org/go#GO_0033463 label: GGA codon-amino acid adaptor activity + SubClassOf('GGA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0030696 label: tRNA (m5U54) methyltransferase activity + SubClassOf('tRNA (m5U54) methyltransferase activity' 'tRNA (uracil) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0006376 label: mRNA splice site selection + SubClassOf('mRNA splice site selection' ObjectSomeValueFrom('part_of' 'spliceosomal complex assembly')) --- !New Class!: http://www.geneontology.org/go#span_ProcessBoundary label: process_boundary + DisjointClasses('process' 'process'Boundary) + DisjointClasses('fiat_process_part' 'process_boundary') + DisjointClasses('process_boundary' 'processual_context') + DisjointClasses('process_aggregate' 'process_boundary') + SubClassOf('process_boundary' 'processual_entity') --- !New Class!: http://www.geneontology.org/go#GO_0004704 label: NF-kappaB-inducing kinase activity + SubClassOf('NF-kappaB-inducing kinase activity' ObjectSomeValueFrom('part_of' 'NIK/NF-kappaB cascade')) --- !New Class!: http://www.geneontology.org/go#GO_0001061 label: bacterial-type RNA polymerase activity + SubClassOf('bacterial-type RNA polymerase activity' ObjectSomeValueFrom('part_of' 'transcription from bacterial-type RNA polymerase promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0043688 label: conversion of aspartyl-tRNA to asparaginyl-tRNA + SubClassOf('conversion of aspartyl-tRNA to asparaginyl-tRNA' 'charged-tRNA amino acid modification') --- !New Class!: http://www.geneontology.org/go#GO_1990013 label: presynaptic grid + SubClassOf('presynaptic grid' ObjectSomeValueFrom('part_of' 'presynaptic active zone')) + SubClassOf('presynaptic grid' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0001188 label: RNA polymerase I transcriptional preinitiation complex assembly + SubClassOf('RNA polymerase I transcriptional preinitiation complex assembly' 'DNA-dependent transcriptional preinitiation complex assembly') + SubClassOf('RNA polymerase I transcriptional preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase I promoter')) --- !New Class!: http://www.geneontology.org/go#GO_1901588 label: dendritic microtubule + SubClassOf('dendritic microtubule' ObjectSomeValueFrom('part_of' 'dendrite')) + SubClassOf('dendritic microtubule' 'neuron part') + EquivalentClasses('dendritic microtubule' ObjectSomeValueFrom('part_of' 'dendrite') ) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_136087 label: Malawimonadidae + SubClassOf('Malawimonadidae' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#GO_0060899 label: regulation of transcription involved in eye field cell fate commitment of camera-type eye + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in eye field cell fate commitment of camera-type eye' ) + SubClassOf('regulation of transcription involved in eye field cell fate commitment of camera-type eye' 'regulation of transcription involved in cell fate commitment') --- !New Class!: http://www.geneontology.org/go#GO_0044748 label: 3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing + EquivalentClasses('3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing' ObjectSomeValueFrom('part_of' 'mature miRNA 3'-end processing') ) + SubClassOf('3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing' ObjectSomeValueFrom('part_of' 'mature miRNA 3'-end processing')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000251 label: MusculoskeletalOrgan + SubClassOf('MusculoskeletalOrgan' 'AnatomicFeature') --- !New Class!: http://www.geneontology.org/go#GO_0007249 label: I-kappaB kinase/NF-kappaB cascade + SubClassOf('I-kappaB kinase/NF-kappaB cascade' ObjectSomeValueFrom('has_part' 'positive regulation of NF-kappaB transcription factor activity')) --- !New Class!: http://www.geneontology.org/go#GO_0046783 label: modification by virus of host polysomes + SubClassOf('modification by virus of host polysomes' 'modulation by virus of host translation') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_314145 label: Laurasiatheria + SubClassOf('Laurasiatheria' 'Eutheria') --- !New Class!: http://www.geneontology.org/go#GO_0032776 label: DNA methylation on cytosine + SubClassOf('DNA methylation on cytosine' 'DNA methylation') --- !New Class!: http://www.geneontology.org/go#GO_0006359 label: regulation of transcription from RNA polymerase III promoter + SubClassOf('regulation of transcription from RNA polymerase III promoter' 'regulation of transcription, DNA-dependent') + SubClassOf('regulation of transcription from RNA polymerase III promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase III promoter')) + EquivalentClasses('regulation of transcription from RNA polymerase III promoter' 'regulation of transcription from RNA polymerase III promoter, mitotic' ) + EquivalentClasses('regulation of transcription from RNA polymerase III promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase III promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_0000983 label: RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity + SubClassOf('RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0017150 label: tRNA dihydrouridine synthase activity + SubClassOf('tRNA dihydrouridine synthase activity' ObjectSomeValueFrom('part_of' 'tRNA dihydrouridine synthesis')) --- !New Class!: http://www.geneontology.org/go#GO_0090054 label: regulation of chromatin silencing at silent mating-type cassette + SubClassOf('regulation of chromatin silencing at silent mating-type cassette' ObjectSomeValueFrom('regulates' 'chromatin silencing at silent mating-type cassette')) + SubClassOf('regulation of chromatin silencing at silent mating-type cassette' 'regulation of chromatin silencing') + EquivalentClasses('regulation of chromatin silencing at silent mating-type cassette' ObjectSomeValueFrom('regulates' 'chromatin silencing at silent mating-type cassette') ) --- !New Class!: http://www.geneontology.org/go#GO_0034401 label: regulation of transcription by chromatin organization + SubClassOf('regulation of transcription by chromatin organization' 'regulation of transcription, DNA-dependent') + EquivalentClasses('regulation of transcription by chromatin organization' ObjectSomeValueFrom('part_of' 'transcription, DNA-dependent') ) --- !New Class!: http://www.geneontology.org/go#SO_0000647 label: miRNA_primary_transcript + SubClassOf('miRNA_primary_transcript' 'nc_primary_transcript') --- !New Class!: http://www.geneontology.org/go#OMIT_0000201 label: MycosisFungoidesSezarySyndrome + SubClassOf('MycosisFungoidesSezarySyndrome' 'MatureTOrNKCellNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0046779 label: suppression by virus of expression of host genes with introns + SubClassOf('suppression by virus of expression of host genes with introns' 'suppression by virus of host transcription') --- !New Class!: http://www.geneontology.org/go#GO_0070575 label: peptide mating pheromone maturation involved in pheromone-induced unidirectional conjugation + SubClassOf('peptide mating pheromone maturation involved in pheromone-induced unidirectional conjugation' 'peptide pheromone maturation') --- !New Class!: http://www.geneontology.org/go#GO_2001163 label: regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues + SubClassOf('regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' ObjectSomeValueFrom('regulates' 'phosphorylation of RNA polymerase II C-terminal domain serine 2 residues')) + SubClassOf('regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' 'regulation of phosphorylation of RNA polymerase II C-terminal domain') + EquivalentClasses('regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' ObjectSomeValueFrom('regulates' 'phosphorylation of RNA polymerase II C-terminal domain serine 2 residues') ) --- !New Class!: http://www.geneontology.org/go#GO_0004884 label: ecdysteroid hormone receptor activity + SubClassOf('ecdysteroid hormone receptor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0000471 label: endonucleolytic cleavage in 3'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) + SubClassOf('endonucleolytic cleavage in 3'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)') --- !New Class!: http://www.geneontology.org/go#span_SpatiotemporalInterval label: spatiotemporal_interval + SubClassOf('spatiotemporal_interval' 'connected_spatiotemporal_region') + DisjointClasses('spatiotemporal_instant' 'spatiotemporal_interval') --- !New Class!: http://www.geneontology.org/go#OMIT_0000107 label: Cartilage + SubClassOf('Cartilage' 'ConnectiveTissue') --- !New Class!: http://www.geneontology.org/go#GO_0032584 label: growth cone membrane + SubClassOf('growth cone membrane' ObjectSomeValueFrom('part_of' 'growth cone')) + SubClassOf('growth cone membrane' 'neuron part') --- !New Class!: http://www.geneontology.org/go#SO_1000036 label: inversion + SubClassOf('inversion' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0032064 label: positive regulation of translational initiation in response to osmotic stress + SubClassOf('positive regulation of translational initiation in response to osmotic stress' 'positive regulation of translation in response to osmotic stress') + SubClassOf('positive regulation of translational initiation in response to osmotic stress' 'positive regulation of translational initiation in response to stress') + SubClassOf('positive regulation of translational initiation in response to osmotic stress' 'regulation of translational initiation in response to osmotic stress') --- !New Class!: http://www.geneontology.org/go#snap_ThreeDimensionalRegion label: three_dimensional_region + DisjointClasses('three_dimensional_region' 'zero_dimensional_region') + DisjointClasses('one_dimensional_region' 'three_dimensional_region') + SubClassOf('three_dimensional_region' 'spatial_region') + DisjointClasses('three_dimensional_region' 'two_dimensional_region') --- !New Class!: http://www.geneontology.org/go#GO_0000982 label: RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity + SubClassOf('RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0036278 label: positive regulation of transcription from RNA polymerase II promoter in response to nitrogen starvation + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to nitrogen starvation' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0035956 label: regulation of starch catabolic process by regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of starch catabolic process by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of starch catabolic process by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000326 label: Dermis + SubClassOf('Dermis' 'Skin') --- !New Class!: http://www.geneontology.org/go#GO_0009373 label: regulation of transcription by pheromones + SubClassOf('regulation of transcription by pheromones' 'regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0033416 label: UGG codon-amino acid adaptor activity + SubClassOf('UGG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0051038 label: negative regulation of transcription during meiosis + SubClassOf('negative regulation of transcription during meiosis' 'regulation of transcription during meiosis') + SubClassOf('negative regulation of transcription during meiosis' 'negative regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_7712 label: Tunicata + SubClassOf('Tunicata' 'Chordata') --- !New Class!: http://www.geneontology.org/go#OMIT_0000267 label: RenalArteries + SubClassOf('RenalArteries' 'Artery') --- !New Class!: http://www.geneontology.org/go#OMIT_0000261 label: BrachialArtery + SubClassOf('BrachialArtery' 'Artery') --- !New Class!: http://www.geneontology.org/go#GO_0052909 label: 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity + SubClassOf('18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity' 'rRNA (adenine-N6-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0038168 label: epidermal growth factor receptor signaling pathway via I-kappaB kinase/NF-kappaB cascade + SubClassOf('epidermal growth factor receptor signaling pathway via I-kappaB kinase/NF-kappaB cascade' 'epidermal growth factor receptor signaling pathway via positive regulation of NF-kappaB transcription factor activity') + SubClassOf('epidermal growth factor receptor signaling pathway via I-kappaB kinase/NF-kappaB cascade' ObjectSomeValueFrom('has_part' 'I-kappaB kinase/NF-kappaB cascade')) --- !New Class!: http://www.geneontology.org/go#GO_0006985 label: positive regulation of NF-kappaB transcription factor activity by ER overload response + EquivalentClasses('positive regulation of NF-kappaB transcription factor activity by ER overload response' ObjectSomeValueFrom('results_in' 'positive regulation of NF-kappaB transcription factor activity') ) + SubClassOf('positive regulation of NF-kappaB transcription factor activity by ER overload response' 'positive regulation of NF-kappaB transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0006433 label: prolyl-tRNA aminoacylation + SubClassOf('prolyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') + EquivalentClasses('prolyl-tRNA aminoacylation' 'mitochondrial prolyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0030847 label: termination of RNA polymerase II transcription, exosome-dependent + SubClassOf('termination of RNA polymerase II transcription, exosome-dependent' 'termination of RNA polymerase II transcription') --- !New Class!: http://www.geneontology.org/go#OMIT_0000218 label: AcinarPulmonaryAdenocarcinoma + SubClassOf('AcinarPulmonaryAdenocarcinoma' 'PulmonaryAdenocarcinoma') --- !New Class!: http://www.geneontology.org/go#GO_0044306 label: neuron projection terminus + SubClassOf('neuron projection terminus' ObjectSomeValueFrom('part_of' 'neuron projection')) + SubClassOf('neuron projection terminus' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0032056 label: positive regulation of translation in response to stress + SubClassOf('positive regulation of translation in response to stress' 'positive regulation of translation') + SubClassOf('positive regulation of translation in response to stress' 'regulation of translation in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0007069 label: negative regulation of transcription from RNA polymerase I promoter during mitosis + SubClassOf('negative regulation of transcription from RNA polymerase I promoter during mitosis' 'negative regulation of transcription during mitosis') + SubClassOf('negative regulation of transcription from RNA polymerase I promoter during mitosis' 'negative regulation of transcription from RNA polymerase I promoter') + SubClassOf('negative regulation of transcription from RNA polymerase I promoter during mitosis' 'regulation of transcription from RNA polymerase I promoter, mitotic') --- !New Class!: http://www.geneontology.org/go#OMIT_0000029 label: Temperature + SubClassOf('Temperature' 'EnvironmentalVariable') --- !New Class!: http://www.geneontology.org/go#GO_0002181 label: cytoplasmic translation + SubClassOf('cytoplasmic translation' 'translation') --- !New Class!: http://www.geneontology.org/go#GO_0033450 label: GUC codon-amino acid adaptor activity + SubClassOf('GUC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_590648 label: Breviatea + SubClassOf('Breviatea' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#GO_0006419 label: alanyl-tRNA aminoacylation + EquivalentClasses('alanyl-tRNA aminoacylation' 'mitochondrial alanyl-tRNA aminoacylation' ) + SubClassOf('alanyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- !New Class!: http://www.geneontology.org/go#SO_0000618 label: RNApol_III_promoter_type_2 + SubClassOf('RNApol_III_promoter_type_2' 'RNApol_III_promoter') --- !New Class!: http://www.geneontology.org/go#GO_0061176 label: type Ib terminal bouton + SubClassOf('type Ib terminal bouton' 'type I terminal bouton') --- !New Class!: http://www.geneontology.org/go#GO_0042780 label: tRNA 3'-end processing + SubClassOf('tRNA 3'-end processing' 'tRNA processing') + SubClassOf('tRNA 3'-end processing' 'ncRNA 3'-end processing') + EquivalentClasses('tRNA 3'-end processing' 'mitochondrial tRNA 3'-end processing' ) --- !New Class!: http://www.geneontology.org/go#GO_0021920 label: regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification' ) + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification' 'regulation of transcription involved in cell fate commitment') --- !New Class!: http://www.geneontology.org/go#GO_0070899 label: mitochondrial tRNA wobble uridine modification + SubClassOf('mitochondrial tRNA wobble uridine modification' 'tRNA wobble uridine modification') + EquivalentClasses('tRNA wobble uridine modification' 'mitochondrial tRNA wobble uridine modification' ) + SubClassOf('mitochondrial tRNA wobble uridine modification' 'mitochondrial tRNA modification') --- !New Class!: http://www.geneontology.org/go#GO_0006393 label: termination of mitochondrial transcription + SubClassOf('termination of mitochondrial transcription' ObjectSomeValueFrom('part_of' 'transcription from mitochondrial promoter')) + EquivalentClasses('DNA-dependent transcription, termination' 'termination of mitochondrial transcription' ) + SubClassOf('termination of mitochondrial transcription' 'DNA-dependent transcription, termination') --- !New Class!: http://www.geneontology.org/go#GO_0033404 label: UUG codon-amino acid adaptor activity + SubClassOf('UUG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0033440 label: ACG codon-amino acid adaptor activity + SubClassOf('ACG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0031125 label: rRNA 3'-end processing + SubClassOf('rRNA 3'-end processing' 'ncRNA 3'-end processing') + SubClassOf('rRNA 3'-end processing' 'rRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0033441 label: AAU codon-amino acid adaptor activity + SubClassOf('AAU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0033403 label: UUA codon-amino acid adaptor activity + SubClassOf('UUA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0044637 label: envenomation resulting in negative regulation of complement activation, classical pathway in other organism + SubClassOf('envenomation resulting in negative regulation of complement activation, classical pathway in other organism' ObjectSomeValueFrom('has_part' 'negative regulation of complement activation, classical pathway in other organism')) + SubClassOf('envenomation resulting in negative regulation of complement activation, classical pathway in other organism' 'envenomation resulting in modulation of complement activation, classical pathway in other organism') --- !New Class!: http://www.geneontology.org/go#MOD_01150 label: neddylated lysine + SubClassOf('neddylated lysine' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_0038005 label: peptide bond cleavage involved in epidermal growth factor receptor ligand maturation + SubClassOf('peptide bond cleavage involved in epidermal growth factor receptor ligand maturation' 'protein processing') + EquivalentClasses('peptide bond cleavage involved in epidermal growth factor receptor ligand maturation' ObjectIntersectionOf('protein processing' ObjectSomeValueFrom('part_of' 'epidermal growth factor receptor ligand maturation')) ) + SubClassOf('peptide bond cleavage involved in epidermal growth factor receptor ligand maturation' ObjectSomeValueFrom('part_of' 'epidermal growth factor receptor ligand maturation')) --- !New Class!: http://www.geneontology.org/go#SO_0001679 label: transcription_regulatory_region + SubClassOf('transcription_regulatory_region' 'regulatory_region') --- !New Class!: http://www.geneontology.org/go#GO_0000448 label: cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) + SubClassOf('cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)') + SubClassOf('cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) + SubClassOf('cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) --- !New Class!: http://www.geneontology.org/go#GO_0035955 label: negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter + EquivalentClasses('negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase II promoter') ) + SubClassOf('negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of oligopeptide transport by negative regulation of transcription from RNA polymerase II promoter') + SubClassOf('negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter' 'regulation of dipeptide transport by regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0043629 label: ncRNA polyadenylation + SubClassOf('ncRNA polyadenylation' 'RNA polyadenylation') + SubClassOf('ncRNA polyadenylation' 'ncRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#GO_0070898 label: RNA polymerase III transcriptional preinitiation complex assembly + SubClassOf('RNA polymerase III transcriptional preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase III promoter')) + SubClassOf('RNA polymerase III transcriptional preinitiation complex assembly' 'DNA-dependent transcriptional preinitiation complex assembly') --- !New Class!: http://www.geneontology.org/go#GO_0071565 label: nBAF complex + SubClassOf('nBAF complex' 'neuron part') --- !New Class!: http://www.geneontology.org/go#SO_0000872 label: trans_spliced_mRNA + SubClassOf('trans_spliced_mRNA' 'mRNA') --- !New Class!: http://www.geneontology.org/go#GO_0033120 label: positive regulation of RNA splicing + EquivalentClasses('positive regulation of RNA splicing' ObjectSomeValueFrom('positively_regulates' 'RNA splicing') ) + SubClassOf('positive regulation of RNA splicing' 'regulation of RNA splicing') + SubClassOf('positive regulation of RNA splicing' ObjectSomeValueFrom('positively_regulates' 'RNA splicing')) --- !New Class!: http://www.geneontology.org/go#GO_0001869 label: negative regulation of complement activation, lectin pathway + SubClassOf('negative regulation of complement activation, lectin pathway' 'negative regulation of complement activation') + SubClassOf('negative regulation of complement activation, lectin pathway' 'regulation of complement activation, lectin pathway') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_9592 label: Gorilla + SubClassOf('Gorilla' 'Homininae') --- !New Class!: http://www.geneontology.org/go#GO_0036265 label: RNA (guanine-N7)-methylation + SubClassOf('RNA (guanine-N7)-methylation' ObjectSomeValueFrom('part_of' '7-methylguanosine RNA capping')) --- !New Class!: http://www.geneontology.org/go#SO_0001224 label: gene_silenced_by_RNA_interference + SubClassOf('gene_silenced_by_RNA_interference' 'silenced_gene') --- !New Class!: http://www.geneontology.org/go#GO_0002182 label: cytoplasmic translational elongation + SubClassOf('cytoplasmic translational elongation' 'translational elongation') + SubClassOf('cytoplasmic translational elongation' ObjectSomeValueFrom('part_of' 'cytoplasmic translation')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000186 label: MixedCellularityHL + SubClassOf('MixedCellularityHL' 'HodgkinLymphoma') --- !New Class!: http://www.geneontology.org/go#GO_0001082 label: RNA polymerase I transcription factor binding transcription factor activity + SubClassOf('RNA polymerase I transcription factor binding transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter')) + SubClassOf('RNA polymerase I transcription factor binding transcription factor activity' ObjectSomeValueFrom('part_of' 'regulation of transcription from RNA polymerase I promoter')) --- !New Class!: http://www.geneontology.org/go#GO_1990025 label: F bouton + SubClassOf('F bouton' 'terminal bouton') --- !New Class!: http://www.geneontology.org/go#GO_0070148 label: mitochondrial glutaminyl-tRNA aminoacylation + SubClassOf('mitochondrial glutaminyl-tRNA aminoacylation' 'glutaminyl-tRNA aminoacylation') + SubClassOf('mitochondrial glutaminyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') + EquivalentClasses('glutaminyl-tRNA aminoacylation' 'mitochondrial glutaminyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0038107 label: nodal signaling pathway involved in determination of left/right asymmetry + SubClassOf('nodal signaling pathway involved in determination of left/right asymmetry' 'regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry') --- !New Class!: http://www.geneontology.org/go#GO_0052911 label: 23S rRNA (guanine(745)-N(1))-methyltransferase activity + SubClassOf('23S rRNA (guanine(745)-N(1))-methyltransferase activity' 'rRNA (guanine-N1-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0043123 label: positive regulation of I-kappaB kinase/NF-kappaB cascade + EquivalentClasses('positive regulation of I-kappaB kinase/NF-kappaB cascade' ObjectSomeValueFrom('positively_regulates' 'I-kappaB kinase/NF-kappaB cascade') ) + SubClassOf('positive regulation of I-kappaB kinase/NF-kappaB cascade' ObjectSomeValueFrom('positively_regulates' 'I-kappaB kinase/NF-kappaB cascade')) + SubClassOf('positive regulation of I-kappaB kinase/NF-kappaB cascade' 'regulation of I-kappaB kinase/NF-kappaB cascade') --- !New Class!: http://www.geneontology.org/go#GO_1990021 label: Schaffer axon collateral + SubClassOf('Schaffer axon collateral' 'axon collateral') --- !New Class!: http://www.geneontology.org/go#GO_0033462 label: GGC codon-amino acid adaptor activity + SubClassOf('GGC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0033434 label: AUC codon-amino acid adaptor activity + SubClassOf('AUC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000175 label: ChronicMyelogenousLeukemia + SubClassOf('ChronicMyelogenousLeukemia' 'ChronicMyeloproliferativeDisorders') --- !New Class!: http://www.geneontology.org/go#GO_0003705 label: RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity + SubClassOf('RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_7878 label: Dipnoi + SubClassOf('Dipnoi' 'Dipnotetrapodomorpha') --- !New Class!: http://www.geneontology.org/go#GO_0000901 label: translation repressor activity, non-nucleic acid binding + SubClassOf('translation repressor activity, non-nucleic acid binding' 'translation factor activity, non-nucleic acid binding') + SubClassOf('translation repressor activity, non-nucleic acid binding' 'translation repressor activity') --- !New Class!: http://www.geneontology.org/go#GO_0001009 label: transcription from RNA polymerase III type 2 promoter + SubClassOf('transcription from RNA polymerase III type 2 promoter' 'transcription from RNA polymerase III promoter') --- !New Class!: http://www.geneontology.org/go#GO_0097440 label: apical dendrite + SubClassOf('apical dendrite' 'dendrite') --- !New Class!: http://www.geneontology.org/go#OMIT_0000154 label: BacillaryAngiomatosis + SubClassOf('BacillaryAngiomatosis' 'ConnectiveOrigin') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_314294 label: Cercopithecoidea + SubClassOf('Cercopithecoidea' 'Catarrhini') --- !New Class!: http://www.geneontology.org/go#GO_0000465 label: exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) + SubClassOf('exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'exonucleolytic trimming involved in rRNA processing') + SubClassOf('exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) + SubClassOf('exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'rRNA 5'-end processing') --- !New Class!: http://www.geneontology.org/go#GO_0070526 label: threonylcarbamoyladenosine biosynthetic process + SubClassOf('threonylcarbamoyladenosine biosynthetic process' 'tRNA modification') --- !New Class!: http://www.geneontology.org/go#OMIT_0000320 label: PosteriorPituitary + SubClassOf('PosteriorPituitary' 'Pituitary') --- !New Class!: http://www.geneontology.org/go#GO_0001190 label: RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription + SubClassOf('RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription' 'RNA polymerase II transcription factor binding transcription factor activity') + SubClassOf('RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription' ObjectSomeValueFrom('part_of' 'positive regulation of transcription from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#GO_1901223 label: negative regulation of NIK/NF-kappaB cascade + SubClassOf('negative regulation of NIK/NF-kappaB cascade' 'regulation of NIK/NF-kappaB cascade') + EquivalentClasses('negative regulation of NIK/NF-kappaB cascade' ObjectSomeValueFrom('negatively_regulates' 'NIK/NF-kappaB cascade') ) + SubClassOf('negative regulation of NIK/NF-kappaB cascade' ObjectSomeValueFrom('negatively_regulates' 'NIK/NF-kappaB cascade')) --- !New Class!: http://www.geneontology.org/go#GO_0002541 label: activation of plasma proteins involved in acute inflammatory response + SubClassOf('activation of plasma proteins involved in acute inflammatory response' 'protein processing') --- !New Class!: http://www.geneontology.org/go#GO_0040029 label: regulation of gene expression, epigenetic + SubClassOf('regulation of gene expression, epigenetic' 'regulation of gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0070901 label: mitochondrial tRNA methylation + SubClassOf('mitochondrial tRNA methylation' 'mitochondrial tRNA modification') + SubClassOf('mitochondrial tRNA methylation' 'tRNA methylation') + EquivalentClasses('tRNA methylation' 'mitochondrial tRNA methylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0035390 label: establishment of chromatin silencing at telomere + SubClassOf('establishment of chromatin silencing at telomere' 'establishment of chromatin silencing') + SubClassOf('establishment of chromatin silencing at telomere' ObjectSomeValueFrom('part_of' 'chromatin silencing at telomere')) --- !New Class!: http://www.geneontology.org/go#MOD_00127 label: N6-lipoyl-L-lysine + SubClassOf('N6-lipoyl-L-lysine' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_2000823 label: regulation of androgen receptor activity + SubClassOf('regulation of androgen receptor activity' 'regulation of transcription from RNA polymerase II promoter') + SubClassOf('regulation of androgen receptor activity' ObjectSomeValueFrom('regulates' 'androgen receptor activity')) + SubClassOf('regulation of androgen receptor activity' 'regulation of sequence-specific DNA binding transcription factor activity') + EquivalentClasses('regulation of androgen receptor activity' ObjectSomeValueFrom('regulates' 'androgen receptor activity') ) --- !New Class!: http://www.geneontology.org/go#GO_0045815 label: positive regulation of gene expression, epigenetic + SubClassOf('positive regulation of gene expression, epigenetic' 'positive regulation of gene expression') + SubClassOf('positive regulation of gene expression, epigenetic' 'regulation of gene expression, epigenetic') --- !New Class!: http://www.geneontology.org/go#GO_0060850 label: regulation of transcription involved in cell fate commitment + SubClassOf('regulation of transcription involved in cell fate commitment' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in cell fate commitment' ) --- !New Class!: http://www.geneontology.org/go#GO_0061397 label: positive regulation of transcription from RNA polymerase II promoter in response to copper ion + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to copper ion' 'regulation of transcription from RNA polymerase II promoter in response to copper ion') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to copper ion' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0000477 label: generation of mature 5'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) + SubClassOf('generation of mature 5'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'rRNA 5'-end processing') + SubClassOf('generation of mature 5'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'cleavage involved in rRNA processing') + SubClassOf('generation of mature 5'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) --- !New Class!: http://www.geneontology.org/go#GO_0031426 label: polycistronic mRNA processing + SubClassOf('polycistronic mRNA processing' 'mRNA processing') --- !New Class!: http://www.geneontology.org/go#SO_0000771 label: QTL + SubClassOf('QTL' 'biological_region') --- !New Class!: http://www.geneontology.org/go#SO_0000159 label: deletion + SubClassOf('deletion' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0030488 label: tRNA methylation + EquivalentClasses('tRNA methylation' 'mitochondrial tRNA methylation' ) + SubClassOf('tRNA methylation' 'tRNA modification') --- !New Class!: http://www.geneontology.org/go#GO_0061396 label: regulation of transcription from RNA polymerase II promoter in response to copper ion + SubClassOf('regulation of transcription from RNA polymerase II promoter in response to copper ion' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#SO_0000613 label: bacterial_RNApol_promoter + SubClassOf('bacterial_RNApol_promoter' 'RNA_polymerase_promoter') --- !New Class!: http://www.geneontology.org/go#GO_1901537 label: positive regulation of DNA demethylation + SubClassOf('positive regulation of DNA demethylation' 'regulation of DNA demethylation') + EquivalentClasses('positive regulation of DNA demethylation' ObjectSomeValueFrom('positively_regulates' 'DNA demethylation') ) + SubClassOf('positive regulation of DNA demethylation' ObjectSomeValueFrom('positively_regulates' 'DNA demethylation')) --- !New Class!: http://www.geneontology.org/go#GO_0061409 label: positive regulation of transcription from RNA polymerase II promoter in response to freezing + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to freezing' 'positive regulation of transcription from RNA polymerase II promoter in response to cold') --- !New Class!: http://www.geneontology.org/go#GO_0006434 label: seryl-tRNA aminoacylation + SubClassOf('seryl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') + EquivalentClasses('seryl-tRNA aminoacylation' 'mitochondrial seryl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0016433 label: rRNA (adenine) methyltransferase activity + SubClassOf('rRNA (adenine) methyltransferase activity' 'rRNA methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0060194 label: regulation of antisense RNA transcription + SubClassOf('regulation of antisense RNA transcription' 'regulation of transcription, DNA-dependent') + EquivalentClasses('regulation of antisense RNA transcription' ObjectSomeValueFrom('regulates' 'antisense RNA transcription') ) + SubClassOf('regulation of antisense RNA transcription' ObjectSomeValueFrom('regulates' 'antisense RNA transcription')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000360 label: Myometrium + SubClassOf('Myometrium' 'Uterus') --- !New Class!: http://www.geneontology.org/go#GO_0009019 label: tRNA (guanine-N1-)-methyltransferase activity + SubClassOf('tRNA (guanine-N1-)-methyltransferase activity' 'tRNA (guanine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#PR_000002968 label: post-translationally modified amino-acid residue + SubClassOf('post-translationally modified amino-acid residue' 'modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_0010425 label: DNA methylation on cytosine within a CNG sequence + SubClassOf('DNA methylation on cytosine within a CNG sequence' 'DNA methylation on cytosine') --- !New Class!: http://www.geneontology.org/go#OMIT_0000111 label: Ectoderm + SubClassOf('Ectoderm' 'EmbryonicTissue') --- !New Class!: http://www.geneontology.org/go#OMIT_0000253 label: ReproductiveOrgan + SubClassOf('ReproductiveOrgan' 'AnatomicFeature') --- !New Class!: http://www.geneontology.org/go#GO_0043204 label: perikaryon + SubClassOf('perikaryon' 'neuron part') + SubClassOf('perikaryon' ObjectSomeValueFrom('part_of' 'neuronal cell body')) --- !New Class!: http://www.geneontology.org/go#SO_1001196 label: cryptogene + SubClassOf('cryptogene' 'maxicircle_gene') + SubClassOf('cryptogene' 'cryptic_gene') --- !New Class!: http://www.geneontology.org/go#GO_0000458 label: endonucleolytic cleavage between LSU-rRNA and 5S rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) + SubClassOf('endonucleolytic cleavage between LSU-rRNA and 5S rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)') + SubClassOf('endonucleolytic cleavage between LSU-rRNA and 5S rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)' ObjectSomeValueFrom('part_of' 'maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)')) --- !New Class!: http://www.geneontology.org/go#SO_0000373 label: recombinationally_inverted_gene + SubClassOf('recombinationally_inverted_gene' 'recombinationally_rearranged_gene') --- !New Class!: http://www.geneontology.org/go#GO_1990024 label: C bouton + SubClassOf('C bouton' 'terminal bouton') --- !New Class!: http://www.geneontology.org/go#GO_0010999 label: regulation of eIF2 alpha phosphorylation by heme + SubClassOf('regulation of eIF2 alpha phosphorylation by heme' ObjectSomeValueFrom('regulates' 'regulation of translational initiation by eIF2 alpha phosphorylation')) --- !New Class!: http://www.geneontology.org/go#GO_0003746 label: translation elongation factor activity + SubClassOf('translation elongation factor activity' 'translation factor activity, nucleic acid binding') + SubClassOf('translation elongation factor activity' ObjectSomeValueFrom('part_of' 'translational elongation')) --- !New Class!: http://www.geneontology.org/go#GO_0001122 label: promoter clearance from bacterial-type RNA polymerase promoter + SubClassOf('promoter clearance from bacterial-type RNA polymerase promoter' 'promoter clearance during DNA-dependent transcription') + SubClassOf('promoter clearance from bacterial-type RNA polymerase promoter' ObjectSomeValueFrom('part_of' 'transcription from bacterial-type RNA polymerase promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0052913 label: 16S rRNA (guanine(966)-N(2))-methyltransferase activity + SubClassOf('16S rRNA (guanine(966)-N(2))-methyltransferase activity' 'rRNA (guanine-N2-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0050779 label: RNA destabilization + SubClassOf('RNA destabilization' 'regulation of RNA stability') --- !New Class!: http://www.geneontology.org/go#GO_2000731 label: negative regulation of termination of RNA polymerase I transcription + SubClassOf('negative regulation of termination of RNA polymerase I transcription' 'regulation of termination of RNA polymerase I transcription') + SubClassOf('negative regulation of termination of RNA polymerase I transcription' ObjectSomeValueFrom('negatively_regulates' 'termination of RNA polymerase I transcription')) + SubClassOf('negative regulation of termination of RNA polymerase I transcription' 'negative regulation of DNA-dependent transcription, termination') + EquivalentClasses('negative regulation of termination of RNA polymerase I transcription' ObjectSomeValueFrom('negatively_regulates' 'termination of RNA polymerase I transcription') ) --- !New Class!: http://www.geneontology.org/go#GO_1900415 label: regulation of fungal-type cell wall biogenesis by regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of fungal-type cell wall biogenesis by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of fungal-type cell wall biogenesis by regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0006424 label: glutamyl-tRNA aminoacylation + SubClassOf('glutamyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') + EquivalentClasses('glutamyl-tRNA aminoacylation' 'mitochondrial glutamyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0031639 label: plasminogen activation + SubClassOf('plasminogen activation' 'zymogen activation') --- !New Class!: http://www.geneontology.org/go#GO_1900622 label: positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling + SubClassOf('positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling' 'positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling' ObjectSomeValueFrom('results_in' 'positive regulation of transcription from RNA polymerase II promoter') ) + SubClassOf('positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling' ObjectSomeValueFrom('results_in' 'positive regulation of transcription from RNA polymerase II promoter')) + SubClassOf('positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling' 'regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling') --- !New Class!: http://www.geneontology.org/go#GO_0002942 label: tRNA m2,2-guanine biosynthesis + SubClassOf('tRNA m2,2-guanine biosynthesis' 'tRNA methylation') --- !New Class!: http://www.geneontology.org/go#GO_0044633 label: modulation of complement activation, alternative pathway in other organism + SubClassOf('modulation of complement activation, alternative pathway in other organism' 'regulation of complement activation, alternative pathway') --- !New Class!: http://www.geneontology.org/go#SO_0001868 label: positional_candidate_gene + SubClassOf('positional_candidate_gene' 'candidate_gene') --- !New Class!: http://www.geneontology.org/go#SO_0000296 label: origin_of_replication + SubClassOf('origin_of_replication' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_1901308 label: regulation of sterol regulatory element binding protein cleavage + SubClassOf('regulation of sterol regulatory element binding protein cleavage' 'regulation of SREBP signaling pathway') + SubClassOf('regulation of sterol regulatory element binding protein cleavage' 'regulation of protein processing') + EquivalentClasses('regulation of sterol regulatory element binding protein cleavage' ObjectSomeValueFrom('regulates' 'sterol regulatory element binding protein cleavage') ) + SubClassOf('regulation of sterol regulatory element binding protein cleavage' ObjectSomeValueFrom('regulates' 'sterol regulatory element binding protein cleavage')) --- !New Class!: http://www.geneontology.org/go#GO_0010673 label: positive regulation of transcription from RNA polymerase II promoter during meiosis + SubClassOf('positive regulation of transcription from RNA polymerase II promoter during meiosis' 'regulation of transcription from RNA polymerase II promoter during meiosis') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter during meiosis' 'positive regulation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter during meiosis' 'positive regulation of transcription during meiosis') --- !New Class!: http://www.geneontology.org/go#GO_1900364 label: negative regulation of mRNA polyadenylation + SubClassOf('negative regulation of mRNA polyadenylation' 'regulation of mRNA polyadenylation') + SubClassOf('negative regulation of mRNA polyadenylation' 'negative regulation of mRNA 3'-end processing') + EquivalentClasses('negative regulation of mRNA polyadenylation' ObjectSomeValueFrom('negatively_regulates' 'mRNA polyadenylation') ) + SubClassOf('negative regulation of mRNA polyadenylation' ObjectSomeValueFrom('negatively_regulates' 'mRNA polyadenylation')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000184 label: LymphocytePredominanceHL + SubClassOf('LymphocytePredominanceHL' 'HodgkinLymphoma') --- !New Class!: http://www.geneontology.org/go#GO_0007070 label: negative regulation of transcription from RNA polymerase II promoter during mitosis + SubClassOf('negative regulation of transcription from RNA polymerase II promoter during mitosis' 'negative regulation of transcription from RNA polymerase II promoter') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter during mitosis' 'regulation of transcription from RNA polymerase II promoter, mitotic') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter during mitosis' 'negative regulation of transcription during mitosis') --- !New Class!: http://www.geneontology.org/go#GO_0097458 label: neuron part + SubClassOf('neuron part' 'cell part') --- !New Class!: http://www.geneontology.org/go#GO_0001059 label: transcription from RNA polymerase IV promoter + SubClassOf('transcription from RNA polymerase IV promoter' 'transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0039606 label: suppression by virus of host translation initiation + SubClassOf('suppression by virus of host translation initiation' 'suppression by virus of host translation') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_42461 label: Opisthokonta incertae sedis + SubClassOf('Opisthokonta incertae sedis' 'Opisthokonta') --- !New Class!: http://www.geneontology.org/go#OMIT_0000291 label: RenalVeins + SubClassOf('RenalVeins' 'Vein') --- !New Class!: http://www.geneontology.org/go#SO_0000548 label: gene_with_edited_transcript + SubClassOf('gene_with_edited_transcript' 'protein_coding_gene') --- !New Class!: http://www.geneontology.org/go#GO_0034473 label: U1 snRNA 3'-end processing + SubClassOf('U1 snRNA 3'-end processing' 'snRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000069 label: CD4 + SubClassOf('CD4' 'TLymphocytes') --- !New Class!: http://www.geneontology.org/go#GO_0001153 label: RNA polymerase III transcription factor recruiting transcription factor activity + SubClassOf('RNA polymerase III transcription factor recruiting transcription factor activity' 'RNA polymerase III transcription factor binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0039603 label: TBP-class protein binding involved in viral suppression of host transcription initiation from RNA polymerase II promoter + SubClassOf('TBP-class protein binding involved in viral suppression of host transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('part_of' 'suppression by virus of host transcription initiation from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000212 label: PulmonaryAdenosquamousCarcinoma + SubClassOf('PulmonaryAdenosquamousCarcinoma' 'Carcinoma') --- !New Class!: http://www.geneontology.org/go#GO_0036308 label: 16S rRNA (guanine(1516)-N(2))-methyltransferase activity + SubClassOf('16S rRNA (guanine(1516)-N(2))-methyltransferase activity' 'rRNA (guanine-N2-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0071264 label: positive regulation of translational initiation in response to starvation + SubClassOf('positive regulation of translational initiation in response to starvation' 'regulation of translational initiation in response to starvation') + SubClassOf('positive regulation of translational initiation in response to starvation' 'positive regulation of translational initiation in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0061421 label: positive regulation of transcription by oleic acid + SubClassOf('positive regulation of transcription by oleic acid' 'carbon catabolite activation of transcription') --- !New Class!: http://www.geneontology.org/go#GO_0031119 label: tRNA pseudouridine synthesis + EquivalentClasses('tRNA pseudouridine synthesis' 'mitochondrial tRNA pseudouridine synthesis' ) + SubClassOf('tRNA pseudouridine synthesis' 'tRNA modification') --- !New Class!: http://www.geneontology.org/go#GO_0044627 label: modulation of complement activation, classical pathway in other organism + SubClassOf('modulation of complement activation, classical pathway in other organism' 'regulation of complement activation, classical pathway') --- !New Class!: http://www.geneontology.org/go#GO_1990027 label: S bouton + SubClassOf('S bouton' 'terminal bouton') --- !New Class!: http://www.geneontology.org/go#GO_0044292 label: dendrite terminus + SubClassOf('dendrite terminus' 'neuron part') + SubClassOf('dendrite terminus' ObjectSomeValueFrom('part_of' 'dendrite')) --- !New Class!: http://www.geneontology.org/go#SO_0001236 label: base + SubClassOf('base' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0016426 label: tRNA (adenine) methyltransferase activity + SubClassOf('tRNA (adenine) methyltransferase activity' 'tRNA methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_1901718 label: regulation of dipeptide transmembrane transport by regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of dipeptide transmembrane transport by regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('regulation of dipeptide transmembrane transport by regulation of transcription from RNA polymerase II promoter' 'regulation of dipeptide transport by regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0001189 label: RNA polymerase I transcriptional preinitiation complex assembly at the promoter for the nuclear large rRNA transcript + SubClassOf('RNA polymerase I transcriptional preinitiation complex assembly at the promoter for the nuclear large rRNA transcript' 'RNA polymerase I transcriptional preinitiation complex assembly') + SubClassOf('RNA polymerase I transcriptional preinitiation complex assembly at the promoter for the nuclear large rRNA transcript' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase I promoter for nuclear large rRNA transcript')) --- !New Class!: http://www.geneontology.org/go#GO_0061412 label: positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0072361 label: regulation of glycolysis by regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of glycolysis by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of glycolysis by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_1900368 label: regulation of RNA interference + SubClassOf('regulation of RNA interference' 'regulation of posttranscriptional gene silencing') + EquivalentClasses('regulation of RNA interference' ObjectSomeValueFrom('regulates' 'RNA interference') ) + SubClassOf('regulation of RNA interference' ObjectSomeValueFrom('regulates' 'RNA interference')) + SubClassOf('regulation of RNA interference' 'regulation of gene silencing by RNA') --- !New Class!: http://www.geneontology.org/go#SO_0001207 label: T7_RNA_Polymerase_Promoter + SubClassOf('T7_RNA_Polymerase_Promoter' 'Phage_RNA_Polymerase_Promoter') --- !New Class!: http://www.geneontology.org/go#GO_1901581 label: negative regulation of telomeric RNA transcription from RNA pol II promoter + SubClassOf('negative regulation of telomeric RNA transcription from RNA pol II promoter' 'negative regulation of transcription from RNA polymerase II promoter') + SubClassOf('negative regulation of telomeric RNA transcription from RNA pol II promoter' 'regulation of telomeric RNA transcription from RNA pol II promoter') + SubClassOf('negative regulation of telomeric RNA transcription from RNA pol II promoter' ObjectSomeValueFrom('negatively_regulates' 'telomeric RNA transcription from RNA pol II promoter')) + EquivalentClasses('negative regulation of telomeric RNA transcription from RNA pol II promoter' ObjectSomeValueFrom('negatively_regulates' 'telomeric RNA transcription from RNA pol II promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_1901193 label: regulation of formation of translation preinitiation complex + SubClassOf('regulation of formation of translation preinitiation complex' 'regulation of translational initiation') + EquivalentClasses('regulation of formation of translation preinitiation complex' ObjectSomeValueFrom('regulates' 'formation of translation preinitiation complex') ) + SubClassOf('regulation of formation of translation preinitiation complex' ObjectSomeValueFrom('regulates' 'formation of translation preinitiation complex')) --- !New Class!: http://www.geneontology.org/go#GO_0090474 label: arg-arg specific dibasic protein processing + SubClassOf('arg-arg specific dibasic protein processing' 'dibasic protein processing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000064 label: Lymphocytes + SubClassOf('Lymphocytes' 'Agranulocyte') --- !New Class!: http://www.geneontology.org/go#GO_0016441 label: posttranscriptional gene silencing + SubClassOf('posttranscriptional gene silencing' 'gene silencing') + SubClassOf('posttranscriptional gene silencing' 'posttranscriptional regulation of gene expression') + SubClassOf('posttranscriptional gene silencing' 'regulation of gene expression, epigenetic') --- !New Class!: http://www.geneontology.org/go#GO_0052912 label: 23S rRNA (guanine(748)-N(1))-methyltransferase activity + SubClassOf('23S rRNA (guanine(748)-N(1))-methyltransferase activity' 'rRNA (guanine-N1-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0038052 label: estrogen-activated sequence-specific DNA binding RNA polymerase II transcription factor activity + SubClassOf('estrogen-activated sequence-specific DNA binding RNA polymerase II transcription factor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_2830 label: Haptophyceae + SubClassOf('Haptophyceae' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#GO_0019081 label: viral translation + SubClassOf('viral translation' ObjectSomeValueFrom('part_of' 'viral genome expression')) + SubClassOf('viral translation' 'translation') --- !New Class!: http://www.geneontology.org/go#GO_0009007 label: site-specific DNA-methyltransferase (adenine-specific) activity + SubClassOf('site-specific DNA-methyltransferase (adenine-specific) activity' ObjectSomeValueFrom('part_of' 'DNA methylation on adenine')) + SubClassOf('site-specific DNA-methyltransferase (adenine-specific) activity' 'DNA-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0045991 label: carbon catabolite activation of transcription + SubClassOf('carbon catabolite activation of transcription' 'positive regulation of transcription, DNA-dependent') + SubClassOf('carbon catabolite activation of transcription' 'carbon catabolite regulation of transcription') --- !New Class!: http://www.geneontology.org/go#GO_0001035 label: transcription from RNA polymerase III type 3 promoter + SubClassOf('transcription from RNA polymerase III type 3 promoter' 'transcription from RNA polymerase III promoter') --- !New Class!: http://www.geneontology.org/go#GO_0000460 label: maturation of 5.8S rRNA + SubClassOf('maturation of 5.8S rRNA' 'rRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0001034 label: sequence-specific DNA binding RNA polymerase III transcription factor activity + SubClassOf('sequence-specific DNA binding RNA polymerase III transcription factor activity' 'sequence-specific DNA binding transcription factor activity') + SubClassOf('sequence-specific DNA binding RNA polymerase III transcription factor activity' ObjectSomeValueFrom('part_of' 'regulation of transcription from RNA polymerase III promoter')) + SubClassOf('sequence-specific DNA binding RNA polymerase III transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0006437 label: tyrosyl-tRNA aminoacylation + EquivalentClasses('tyrosyl-tRNA aminoacylation' 'mitochondrial tyrosyl-tRNA aminoacylation' ) + SubClassOf('tyrosyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_7586 label: Echinodermata + SubClassOf('Echinodermata' 'Deuterostomia') --- !New Class!: http://www.geneontology.org/go#GO_0035551 label: protein initiator methionine removal involved in protein maturation + SubClassOf('protein initiator methionine removal involved in protein maturation' 'protein processing') + EquivalentClasses('protein initiator methionine removal involved in protein maturation' ObjectSomeValueFrom('part_of' 'protein maturation') ) --- !New Class!: http://www.geneontology.org/go#GO_0061408 label: positive regulation of transcription from RNA polymerase II promoter in response to heat stress + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to heat stress' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0070677 label: rRNA (cytosine-2'-O-)-methyltransferase activity + SubClassOf('rRNA (cytosine-2'-O-)-methyltransferase activity' 'rRNA (cytosine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#SO_0000996 label: predicted_gene + SubClassOf('predicted_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_1990020 label: recurrent axon collateral + SubClassOf('recurrent axon collateral' 'axon collateral') --- !New Class!: http://www.geneontology.org/go#GO_2000236 label: negative regulation of tRNA processing + SubClassOf('negative regulation of tRNA processing' 'regulation of tRNA processing') + SubClassOf('negative regulation of tRNA processing' ObjectSomeValueFrom('negatively_regulates' 'tRNA processing')) + EquivalentClasses('negative regulation of tRNA processing' ObjectSomeValueFrom('negatively_regulates' 'tRNA processing') ) --- !New Class!: http://www.geneontology.org/go#GO_0010998 label: regulation of translational initiation by eIF2 alpha phosphorylation + SubClassOf('regulation of translational initiation by eIF2 alpha phosphorylation' 'regulation of translational initiation in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0000474 label: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) + SubClassOf('maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' 'maturation of SSU-rRNA') --- !New Class!: http://www.geneontology.org/go#GO_0001142 label: sequence-specific DNA binding mitochondrial RNA polymerase transcription factor activity + SubClassOf('sequence-specific DNA binding mitochondrial RNA polymerase transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from mitochondrial promoter')) + SubClassOf('sequence-specific DNA binding mitochondrial RNA polymerase transcription factor activity' 'sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0006385 label: transcription elongation from RNA polymerase III promoter + SubClassOf('transcription elongation from RNA polymerase III promoter' 'DNA-dependent transcription, elongation') + SubClassOf('transcription elongation from RNA polymerase III promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0070130 label: negative regulation of mitochondrial translation + SubClassOf('negative regulation of mitochondrial translation' 'regulation of mitochondrial translation') + EquivalentClasses('negative regulation of mitochondrial translation' ObjectSomeValueFrom('negatively_regulates' 'mitochondrial translation') ) + SubClassOf('negative regulation of mitochondrial translation' ObjectSomeValueFrom('negatively_regulates' 'mitochondrial translation')) + SubClassOf('negative regulation of mitochondrial translation' 'negative regulation of translation') --- !New Class!: http://www.geneontology.org/go#GO_0033429 label: CGU codon-amino acid adaptor activity + SubClassOf('CGU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#SO_0000929 label: edited_mRNA + SubClassOf('edited_mRNA' 'mRNA') --- !New Class!: http://www.geneontology.org/go#OMIT_0000369 label: Lungs + SubClassOf('Lungs' 'LowerRespiratoryTract') --- !New Class!: http://www.geneontology.org/go#OMIT_0000137 label: Virallnfection + SubClassOf('Virallnfection' 'Infection') --- !New Class!: http://www.geneontology.org/go#GO_0070613 label: regulation of protein processing + SubClassOf('regulation of protein processing' 'regulation of gene expression') + EquivalentClasses('regulation of protein processing' ObjectSomeValueFrom('regulates' 'protein processing') ) + SubClassOf('regulation of protein processing' ObjectSomeValueFrom('regulates' 'protein processing')) --- !New Class!: http://www.geneontology.org/go#GO_0001015 label: snoRNA transcription from an RNA polymerase II promoter + SubClassOf('snoRNA transcription from an RNA polymerase II promoter' 'snoRNA transcription') + SubClassOf('snoRNA transcription from an RNA polymerase II promoter' 'transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#OMIT_0000352 label: FemaleReproductiveSystem + SubClassOf('FemaleReproductiveSystem' 'ReproductiveOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0007319 label: negative regulation of oskar mRNA translation + SubClassOf('negative regulation of oskar mRNA translation' 'regulation of oskar mRNA translation') + SubClassOf('negative regulation of oskar mRNA translation' 'negative regulation of translation') --- !New Class!: http://www.geneontology.org/go#SO_0000609 label: oligo_U_tail + SubClassOf('oligo_U_tail' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0001043 label: RNA polymerase III hybrid type promoter transcriptional preinitiation complex assembly + SubClassOf('RNA polymerase III hybrid type promoter transcriptional preinitiation complex assembly' 'RNA polymerase III transcriptional preinitiation complex assembly') --- !New Class!: http://www.geneontology.org/go#GO_0061407 label: positive regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide' 'positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress') --- !New Class!: http://www.geneontology.org/go#GO_0070183 label: mitochondrial tryptophanyl-tRNA aminoacylation + EquivalentClasses('tryptophanyl-tRNA aminoacylation' 'mitochondrial tryptophanyl-tRNA aminoacylation' ) + SubClassOf('mitochondrial tryptophanyl-tRNA aminoacylation' 'tryptophanyl-tRNA aminoacylation') + SubClassOf('mitochondrial tryptophanyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') --- !New Class!: http://www.geneontology.org/go#GO_0097442 label: CA3 pyramidal cell dendrite + SubClassOf('CA3 pyramidal cell dendrite' 'dendrite') --- !New Class!: http://www.geneontology.org/go#GO_0044541 label: zymogen activation in other organism + SubClassOf('zymogen activation in other organism' 'zymogen activation') --- !New Class!: http://www.geneontology.org/go#GO_0044639 label: envenomation resulting in modulation of complement activation, lectin pathway in other organism + SubClassOf('envenomation resulting in modulation of complement activation, lectin pathway in other organism' ObjectSomeValueFrom('has_part' 'modulation of complement activation, lectin pathway in other organism')) --- !New Class!: http://www.geneontology.org/go#GO_0001081 label: nitrogen catabolite repression of transcription from RNA polymerase II promoter + SubClassOf('nitrogen catabolite repression of transcription from RNA polymerase II promoter' 'nitrogen catabolite regulation of transcription from RNA polymerase II promoter') + SubClassOf('nitrogen catabolite repression of transcription from RNA polymerase II promoter' 'nitrogen catabolite repression of transcription') --- !New Class!: http://www.geneontology.org/go#OMIT_0000331 label: CysternaChyli + SubClassOf('CysternaChyli' 'LymphaticVessels') --- !New Class!: http://www.geneontology.org/go#GO_0044642 label: envenomation resulting in modulation of complement activation, alternative pathway in other organism + SubClassOf('envenomation resulting in modulation of complement activation, alternative pathway in other organism' ObjectSomeValueFrom('has_part' 'modulation of complement activation, alternative pathway in other organism')) --- !New Class!: http://www.geneontology.org/go#GO_0035598 label: N6-threonylcarbomyladenosine methylthiotransferase activity + SubClassOf('N6-threonylcarbomyladenosine methylthiotransferase activity' ObjectSomeValueFrom('part_of' 'tRNA methylthiolation')) --- !New Class!: http://www.geneontology.org/go#GO_2001208 label: negative regulation of transcription elongation from RNA polymerase I promoter + EquivalentClasses('negative regulation of transcription elongation from RNA polymerase I promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription elongation from RNA polymerase I promoter') ) + SubClassOf('negative regulation of transcription elongation from RNA polymerase I promoter' 'regulation of transcription elongation from RNA polymerase I promoter') + SubClassOf('negative regulation of transcription elongation from RNA polymerase I promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription elongation from RNA polymerase I promoter')) + SubClassOf('negative regulation of transcription elongation from RNA polymerase I promoter' 'negative regulation of DNA-dependent transcription, elongation') --- !New Class!: http://www.geneontology.org/go#SO_0000108 label: mRNA_with_frameshift + SubClassOf('mRNA_with_frameshift' 'mRNA') --- !New Class!: http://www.geneontology.org/go#GO_0006379 label: mRNA cleavage + SubClassOf('mRNA cleavage' 'mRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0039644 label: suppression by virus of host NF-kappaB transcription factor activity + SubClassOf('suppression by virus of host NF-kappaB transcription factor activity' 'suppression by virus of host transcription') --- !New Class!: http://www.geneontology.org/go#GO_0071893 label: BMP signaling pathway involved in nephric duct formation + SubClassOf('BMP signaling pathway involved in nephric duct formation' 'BMP signaling pathway') + EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in nephric duct formation' ) --- !New Class!: http://www.geneontology.org/go#GO_1900422 label: positive regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('positive regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0060196 label: positive regulation of antisense RNA transcription + SubClassOf('positive regulation of antisense RNA transcription' 'positive regulation of transcription, DNA-dependent') + SubClassOf('positive regulation of antisense RNA transcription' ObjectSomeValueFrom('positively_regulates' 'antisense RNA transcription')) + EquivalentClasses('positive regulation of antisense RNA transcription' ObjectSomeValueFrom('positively_regulates' 'antisense RNA transcription') ) + SubClassOf('positive regulation of antisense RNA transcription' 'regulation of antisense RNA transcription') --- !New Class!: http://www.geneontology.org/go#snap_Disposition label: disposition + DisjointClasses('disposition' 'role') + DisjointClasses('disposition' 'function') + SubClassOf('disposition' 'realizable_entity') --- !New Class!: http://www.geneontology.org/go#GO_0090295 label: nitrogen catabolite repression of transcription + SubClassOf('nitrogen catabolite repression of transcription' 'negative regulation of transcription, DNA-dependent') + SubClassOf('nitrogen catabolite repression of transcription' 'nitrogen catabolite regulation of transcription') --- !New Class!: http://www.geneontology.org/go#GO_0038050 label: glucocorticoid-activated sequence-specific DNA binding RNA polymerase II transcription factor activity + SubClassOf('glucocorticoid-activated sequence-specific DNA binding RNA polymerase II transcription factor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000290 label: PulmonaryVeins + SubClassOf('PulmonaryVeins' 'Vein') --- !New Class!: http://www.geneontology.org/go#GO_0032023 label: trypsinogen activation + SubClassOf('trypsinogen activation' 'zymogen activation') --- !New Class!: http://www.geneontology.org/go#GO_0043489 label: RNA stabilization + SubClassOf('RNA stabilization' 'regulation of RNA stability') --- !New Class!: http://www.geneontology.org/go#GO_0035957 label: positive regulation of starch catabolic process by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of starch catabolic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of starch catabolic process by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) + SubClassOf('positive regulation of starch catabolic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of starch catabolic process by regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0032939 label: positive regulation of translation in response to oxidative stress + SubClassOf('positive regulation of translation in response to oxidative stress' 'regulation of translation in response to oxidative stress') + SubClassOf('positive regulation of translation in response to oxidative stress' 'positive regulation of translation in response to stress') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_6040 label: Porifera + SubClassOf('Porifera' 'Metazoa') --- !New Class!: http://www.geneontology.org/go#GO_0007068 label: negative regulation of transcription during mitosis + SubClassOf('negative regulation of transcription during mitosis' 'regulation of transcription during mitosis') + SubClassOf('negative regulation of transcription during mitosis' 'negative regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0034965 label: intronic box C/D snoRNA processing + SubClassOf('intronic box C/D snoRNA processing' 'intronic snoRNA processing') + SubClassOf('intronic box C/D snoRNA processing' 'box C/D snoRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0052906 label: tRNA (guanine(37)-N(1))-methyltransferase activity + SubClassOf('tRNA (guanine(37)-N(1))-methyltransferase activity' 'tRNA (guanine-N1-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0070918 label: production of small RNA involved in gene silencing by RNA + SubClassOf('production of small RNA involved in gene silencing by RNA' ObjectSomeValueFrom('part_of' 'gene silencing by RNA')) + SubClassOf('production of small RNA involved in gene silencing by RNA' 'dsRNA fragmentation') --- !New Class!: http://www.geneontology.org/go#GO_0010216 label: maintenance of DNA methylation + SubClassOf('maintenance of DNA methylation' ObjectSomeValueFrom('part_of' 'DNA methylation')) --- !New Class!: http://www.geneontology.org/go#GO_0061404 label: positive regulation of transcription from RNA polymerase II promoter in response to increased salt + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to increased salt' 'positive regulation of transcription from RNA polymerase II promoter in response to salt stress') --- !New Class!: http://www.geneontology.org/go#GO_0033444 label: AAG codon-amino acid adaptor activity + SubClassOf('AAG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000800 label: Regulation + SubClassOf('Regulation' 'biological_process') --- !New Class!: http://www.geneontology.org/go#OMIT_0000272 label: AorticArch + SubClassOf('AorticArch' 'Aorta') --- !New Class!: http://www.geneontology.org/go#GO_0000478 label: endonucleolytic cleavage involved in rRNA processing + EquivalentClasses('endonucleolytic cleavage involved in rRNA processing' ObjectSomeValueFrom('part_of' 'rRNA processing') ) + SubClassOf('endonucleolytic cleavage involved in rRNA processing' 'cleavage involved in rRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0016427 label: tRNA (cytosine) methyltransferase activity + SubClassOf('tRNA (cytosine) methyltransferase activity' 'tRNA methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0042789 label: mRNA transcription from RNA polymerase II promoter + SubClassOf('mRNA transcription from RNA polymerase II promoter' 'mRNA transcription') + SubClassOf('mRNA transcription from RNA polymerase II promoter' 'transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#MOD_01148 label: ubiquitinylated lysine + SubClassOf('ubiquitinylated lysine' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_1900471 label: negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter + SubClassOf('negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cellular carbohydrate metabolic process by negative regulation of transcription, DNA-dependent') + SubClassOf('negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' 'regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0070869 label: heterochromatin assembly involved in chromatin silencing + EquivalentClasses('heterochromatin assembly involved in chromatin silencing' ObjectSomeValueFrom('part_of' 'chromatin silencing') ) + SubClassOf('heterochromatin assembly involved in chromatin silencing' 'heterochromatin organization involved in chromatin silencing') --- !New Class!: http://www.geneontology.org/go#GO_0021919 label: BMP signaling pathway involved in spinal cord dorsal/ventral patterning + EquivalentClasses('BMP signaling pathway involved in spinal cord dorsal/ventral patterning' 'BMP signaling pathway' ) + SubClassOf('BMP signaling pathway involved in spinal cord dorsal/ventral patterning' 'BMP signaling pathway') --- !New Class!: http://www.geneontology.org/go#OMIT_0000124 label: AutoimmuneDisorder + SubClassOf('AutoimmuneDisorder' 'Disease') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_9348 label: Xenarthra + SubClassOf('Xenarthra' 'Eutheria') --- !New Class!: http://www.geneontology.org/go#GO_0019057 label: modulation by virus of host translation + SubClassOf('modulation by virus of host translation' 'modulation by virus of host gene expression') + SubClassOf('modulation by virus of host translation' 'modulation by symbiont of host translation') --- !New Class!: http://www.geneontology.org/go#GO_0006447 label: regulation of translational initiation by iron + SubClassOf('regulation of translational initiation by iron' 'regulation of translational initiation') --- !New Class!: http://www.geneontology.org/go#GO_0001057 label: RNA polymerase IV activity + EquivalentClasses('RNA polymerase IV activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase IV promoter') ) + SubClassOf('RNA polymerase IV activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase IV promoter')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000196 label: MultipleMyelomaSolitaryPlasmacytoma + SubClassOf('MultipleMyelomaSolitaryPlasmacytoma' 'MatureBCellNeoplasm') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_4751 label: Fungi + SubClassOf('Fungi' 'Opisthokonta') --- !New Class!: http://www.geneontology.org/go#SO_0001715 label: ISRE + SubClassOf('ISRE' 'transcriptional_cis_regulatory_region') --- !New Class!: http://www.geneontology.org/go#OMIT_0000365 label: Diaphragm + SubClassOf('Diaphragm' 'RespiratoryOrgan') --- !New Class!: http://www.geneontology.org/go#OMIT_0000318 label: Thyroid + SubClassOf('Thyroid' 'EndocrineOrgan') --- !New Class!: http://www.geneontology.org/go#GO_2000235 label: regulation of tRNA processing + SubClassOf('regulation of tRNA processing' ObjectSomeValueFrom('regulates' 'tRNA processing')) + SubClassOf('regulation of tRNA processing' 'regulation of gene expression') + EquivalentClasses('regulation of tRNA processing' ObjectSomeValueFrom('regulates' 'tRNA processing') ) --- !New Class!: http://www.geneontology.org/go#GO_0008494 label: translation activator activity + SubClassOf('translation activator activity' 'translation regulator activity, nucleic acid binding') + SubClassOf('translation activator activity' ObjectSomeValueFrom('part_of' 'positive regulation of translation')) --- !New Class!: http://www.geneontology.org/go#GO_1900391 label: regulation of cAMP-mediated signaling by regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of cAMP-mediated signaling by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of cAMP-mediated signaling by regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0097236 label: positive regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation' 'regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation') --- !New Class!: http://www.geneontology.org/go#GO_0033414 label: UGC codon-amino acid adaptor activity + SubClassOf('UGC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0033435 label: AUA codon-amino acid adaptor activity + SubClassOf('AUA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_1900175 label: regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry + EquivalentClasses('regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' ObjectSomeValueFrom('regulates' 'nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry') ) + SubClassOf('regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' ObjectSomeValueFrom('regulates' 'nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry')) + SubClassOf('regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'regulation of nodal signaling pathway involved in determination of left/right asymmetry') --- !New Class!: http://www.geneontology.org/go#OMIT_0000306 label: Pancreas + SubClassOf('Pancreas' 'DigestiveOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0044224 label: juxtaparanode region of axon + SubClassOf('juxtaparanode region of axon' 'axon part') + SubClassOf('juxtaparanode region of axon' ObjectSomeValueFrom('part_of' 'main axon')) --- !New Class!: http://www.geneontology.org/go#GO_0000379 label: tRNA-type intron splice site recognition and cleavage + SubClassOf('tRNA-type intron splice site recognition and cleavage' 'RNA processing') + SubClassOf('tRNA-type intron splice site recognition and cleavage' ObjectSomeValueFrom('part_of' 'tRNA splicing, via endonucleolytic cleavage and ligation')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000205 label: ColorectalAdenocarcinoma + SubClassOf('ColorectalAdenocarcinoma' 'Carcinoma') --- !New Class!: http://www.geneontology.org/go#SO_0000657 label: repeat_region + SubClassOf('repeat_region' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_2001207 label: regulation of transcription elongation from RNA polymerase I promoter + SubClassOf('regulation of transcription elongation from RNA polymerase I promoter' 'regulation of transcription from RNA polymerase I promoter') + SubClassOf('regulation of transcription elongation from RNA polymerase I promoter' ObjectSomeValueFrom('regulates' 'transcription elongation from RNA polymerase I promoter')) + EquivalentClasses('regulation of transcription elongation from RNA polymerase I promoter' ObjectSomeValueFrom('regulates' 'transcription elongation from RNA polymerase I promoter') ) + SubClassOf('regulation of transcription elongation from RNA polymerase I promoter' 'regulation of DNA-dependent transcription, elongation') --- !New Class!: http://www.geneontology.org/go#GO_0031051 label: scnRNA production + SubClassOf('scnRNA production' 'dsRNA fragmentation') --- !New Class!: http://www.geneontology.org/go#GO_0032544 label: plastid translation + EquivalentClasses('translation' 'plastid translation' ) + SubClassOf('plastid translation' 'translation') --- !New Class!: http://www.geneontology.org/go#OMIT_0000250 label: LymphaticOrgan + SubClassOf('LymphaticOrgan' 'AnatomicFeature') --- !New Class!: http://www.geneontology.org/go#GO_0001136 label: TFIIE-class transcription factor recruiting transcription factor activity + SubClassOf('TFIIE-class transcription factor recruiting transcription factor activity' 'TFIIE-class binding transcription factor activity') + SubClassOf('TFIIE-class transcription factor recruiting transcription factor activity' 'RNA polymerase II transcription factor recruiting transcription factor activity') + SubClassOf('TFIIE-class transcription factor recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase II transcriptional preinitiation complex assembly')) --- !New Class!: http://www.geneontology.org/go#GO_0036207 label: positive regulation of histone gene expression + SubClassOf('positive regulation of histone gene expression' 'regulation of histone gene expression') + SubClassOf('positive regulation of histone gene expression' 'positive regulation of gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0030513 label: positive regulation of BMP signaling pathway + EquivalentClasses('positive regulation of BMP signaling pathway' ObjectSomeValueFrom('positively_regulates' 'BMP signaling pathway') ) + SubClassOf('positive regulation of BMP signaling pathway' 'regulation of BMP signaling pathway') + SubClassOf('positive regulation of BMP signaling pathway' ObjectSomeValueFrom('positively_regulates' 'BMP signaling pathway')) --- !New Class!: http://www.geneontology.org/go#GO_0071424 label: rRNA (cytosine-N4-)-methyltransferase activity + SubClassOf('rRNA (cytosine-N4-)-methyltransferase activity' 'rRNA (cytosine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0000431 label: regulation of transcription from RNA polymerase II promoter by galactose + SubClassOf('regulation of transcription from RNA polymerase II promoter by galactose' 'regulation of transcription by galactose') + SubClassOf('regulation of transcription from RNA polymerase II promoter by galactose' 'carbon catabolite regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0032968 label: positive regulation of transcription elongation from RNA polymerase II promoter + EquivalentClasses('positive regulation of transcription elongation from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription elongation from RNA polymerase II promoter') ) + SubClassOf('positive regulation of transcription elongation from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription elongation from RNA polymerase II promoter')) + SubClassOf('positive regulation of transcription elongation from RNA polymerase II promoter' 'regulation of transcription elongation from RNA polymerase II promoter') + SubClassOf('positive regulation of transcription elongation from RNA polymerase II promoter' 'positive regulation of DNA-dependent transcription, elongation') --- !New Class!: http://www.geneontology.org/go#GO_0009020 label: tRNA (guanosine-2'-O-)-methyltransferase activity + SubClassOf('tRNA (guanosine-2'-O-)-methyltransferase activity' 'tRNA (guanine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0045897 label: positive regulation of transcription during mitosis + SubClassOf('positive regulation of transcription during mitosis' 'positive regulation of transcription, DNA-dependent') + EquivalentClasses('positive regulation of transcription, DNA-dependent' 'positive regulation of transcription during mitosis' ) + SubClassOf('positive regulation of transcription during mitosis' 'regulation of transcription during mitosis') --- !New Class!: http://www.geneontology.org/go#GO_0045814 label: negative regulation of gene expression, epigenetic + SubClassOf('negative regulation of gene expression, epigenetic' 'negative regulation of gene expression') + SubClassOf('negative regulation of gene expression, epigenetic' 'regulation of gene expression, epigenetic') --- !New Class!: http://www.geneontology.org/go#GO_0097448 label: spine mat + SubClassOf('spine mat' ObjectSomeValueFrom('has_part' 'neuron spine')) + SubClassOf('spine mat' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0045899 label: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly + SubClassOf('positive regulation of RNA polymerase II transcriptional preinitiation complex assembly' ObjectSomeValueFrom('positively_regulates' 'RNA polymerase II transcriptional preinitiation complex assembly')) + SubClassOf('positive regulation of RNA polymerase II transcriptional preinitiation complex assembly' 'regulation of RNA polymerase II transcriptional preinitiation complex assembly') + SubClassOf('positive regulation of RNA polymerase II transcriptional preinitiation complex assembly' 'positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of RNA polymerase II transcriptional preinitiation complex assembly' ObjectSomeValueFrom('positively_regulates' 'RNA polymerase II transcriptional preinitiation complex assembly') ) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_9577 label: Hylobatidae + SubClassOf('Hylobatidae' 'Hominoidea') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_10213 label: Mesozoa + SubClassOf('Mesozoa' 'Metazoa') --- !New Class!: http://www.geneontology.org/go#GO_0097416 label: Lewy body-like hyaline inclusion + SubClassOf('Lewy body-like hyaline inclusion' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0090375 label: negative regulation of transcription from RNA polymerase II promoter in response to iron ion starvation + SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to iron ion starvation' 'regulation of transcription from RNA polymerase II promoter in response to iron ion starvation') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to iron ion starvation' 'negative regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#SO_0001225 label: gene_silenced_by_histone_modification + SubClassOf('gene_silenced_by_histone_modification' 'silenced_gene') --- !New Class!: http://www.geneontology.org/go#SO_0000892 label: positively_autoregulated_gene + SubClassOf('positively_autoregulated_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_7898 label: Actinopterygii + SubClassOf('Actinopterygii' 'Euteleostomi') --- !New Class!: http://www.geneontology.org/go#GO_0000470 label: maturation of LSU-rRNA + SubClassOf('maturation of LSU-rRNA' 'rRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0006435 label: threonyl-tRNA aminoacylation + SubClassOf('threonyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') + EquivalentClasses('threonyl-tRNA aminoacylation' 'mitochondrial threonyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0072369 label: regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) + SubClassOf('regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter' 'regulation of lipid transport by regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0060994 label: regulation of transcription from RNA polymerase II promoter involved in kidney development + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in kidney development' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in kidney development' ) --- !New Class!: http://www.geneontology.org/go#GO_0006362 label: transcription elongation from RNA polymerase I promoter + SubClassOf('transcription elongation from RNA polymerase I promoter' 'DNA-dependent transcription, elongation') + SubClassOf('transcription elongation from RNA polymerase I promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0008384 label: IkappaB kinase activity + SubClassOf('IkappaB kinase activity' ObjectSomeValueFrom('part_of' 'I-kappaB phosphorylation')) --- !New Class!: http://www.geneontology.org/go#GO_0032455 label: nerve growth factor processing + SubClassOf('nerve growth factor processing' 'peptide hormone processing') --- !New Class!: http://www.geneontology.org/go#GO_0001917 label: photoreceptor inner segment + SubClassOf('photoreceptor inner segment' 'neuron part') --- !New Class!: http://www.geneontology.org/go#SO_0001055 label: transcriptional_cis_regulatory_region + SubClassOf('transcriptional_cis_regulatory_region' 'transcription_regulatory_region') --- !New Class!: http://www.geneontology.org/go#GO_2000805 label: negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled + SubClassOf('negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled' 'negative regulation of DNA-dependent transcription, termination') + SubClassOf('negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled' 'regulation of termination of RNA polymerase II transcription, poly(A)-coupled') + SubClassOf('negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled' ObjectSomeValueFrom('negatively_regulates' 'termination of RNA polymerase II transcription, poly(A)-coupled')) + EquivalentClasses('negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled' ObjectSomeValueFrom('negatively_regulates' 'termination of RNA polymerase II transcription, poly(A)-coupled') ) --- !New Class!: http://www.geneontology.org/go#GO_0002127 label: wobble base cytosine methylation + SubClassOf('wobble base cytosine methylation' 'tRNA wobble cytosine modification') + SubClassOf('wobble base cytosine methylation' 'tRNA C5-cytosine methylation') --- !New Class!: http://www.geneontology.org/go#GO_0070902 label: mitochondrial tRNA pseudouridine synthesis + EquivalentClasses('tRNA pseudouridine synthesis' 'mitochondrial tRNA pseudouridine synthesis' ) + SubClassOf('mitochondrial tRNA pseudouridine synthesis' 'tRNA pseudouridine synthesis') + SubClassOf('mitochondrial tRNA pseudouridine synthesis' 'mitochondrial tRNA modification') --- !New Class!: http://www.geneontology.org/go#GO_0001079 label: nitrogen catabolite regulation of transcription from RNA polymerase II promoter + SubClassOf('nitrogen catabolite regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') + SubClassOf('nitrogen catabolite regulation of transcription from RNA polymerase II promoter' 'nitrogen catabolite regulation of transcription') --- !New Class!: http://www.geneontology.org/go#GO_1900448 label: regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0001054 label: RNA polymerase I activity + EquivalentClasses('RNA polymerase I activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter') ) + SubClassOf('RNA polymerase I activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter')) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_7742 label: Vertebrata + SubClassOf('Vertebrata' 'Craniata') --- !New Class!: http://www.geneontology.org/go#GO_0044225 label: apical pole of neuron + SubClassOf('apical pole of neuron' 'neuron part') + SubClassOf('apical pole of neuron' ObjectSomeValueFrom('part_of' 'neuronal cell body')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000246 label: DigestiveOrgan + SubClassOf('DigestiveOrgan' 'AnatomicFeature') --- !New Class!: http://www.geneontology.org/go#GO_0070159 label: mitochondrial threonyl-tRNA aminoacylation + SubClassOf('mitochondrial threonyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') + SubClassOf('mitochondrial threonyl-tRNA aminoacylation' 'threonyl-tRNA aminoacylation') + EquivalentClasses('threonyl-tRNA aminoacylation' 'mitochondrial threonyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0001084 label: TFIID-class binding transcription factor activity + SubClassOf('TFIID-class binding transcription factor activity' 'RNA polymerase II basal transcription factor binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0071035 label: nuclear polyadenylation-dependent rRNA catabolic process + SubClassOf('nuclear polyadenylation-dependent rRNA catabolic process' 'nuclear polyadenylation-dependent ncRNA catabolic process') --- !New Class!: http://www.geneontology.org/go#GO_0039550 label: suppression by virus of host IRF3 activity by inhibition of DNA binding + SubClassOf('suppression by virus of host IRF3 activity by inhibition of DNA binding' 'suppression by virus of host IRF3 activity') --- !New Class!: http://www.geneontology.org/go#GO_1901259 label: chloroplast rRNA processing + SubClassOf('chloroplast rRNA processing' 'rRNA processing') + EquivalentClasses('rRNA processing' 'chloroplast rRNA processing' ) --- !New Class!: http://www.geneontology.org/go#span_ProcessualContext label: processual_context + DisjointClasses('process' 'process'ualContext) + DisjointClasses('process_boundary' 'processual_context') + DisjointClasses('process_aggregate' 'processual_context') + DisjointClasses('fiat_process_part' 'processual_context') + SubClassOf('processual_context' 'processual_entity') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_6073 label: Cnidaria + SubClassOf('Cnidaria' 'Eumetazoa') --- !New Class!: http://www.geneontology.org/go#GO_0031939 label: negative regulation of chromatin silencing at telomere + SubClassOf('negative regulation of chromatin silencing at telomere' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing at telomere')) + EquivalentClasses('negative regulation of chromatin silencing at telomere' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing at telomere') ) + SubClassOf('negative regulation of chromatin silencing at telomere' 'regulation of chromatin silencing at telomere') + SubClassOf('negative regulation of chromatin silencing at telomere' 'negative regulation of chromatin silencing') --- !New Class!: http://www.geneontology.org/go#GO_0036031 label: recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex + SubClassOf('recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex' ObjectSomeValueFrom('part_of' '7-methylguanosine mRNA capping')) --- !New Class!: http://www.geneontology.org/go#GO_1900525 label: positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of phospholipid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0000467 label: exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) + SubClassOf('exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'exonucleolytic trimming involved in rRNA processing') + SubClassOf('exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) + SubClassOf('exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'rRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#GO_0033459 label: GAA codon-amino acid adaptor activity + SubClassOf('GAA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0001123 label: transcription initiation from bacterial-type RNA polymerase promoter + SubClassOf('transcription initiation from bacterial-type RNA polymerase promoter' ObjectSomeValueFrom('part_of' 'transcription from bacterial-type RNA polymerase promoter')) + SubClassOf('transcription initiation from bacterial-type RNA polymerase promoter' 'DNA-dependent transcription, initiation') --- !New Class!: http://www.geneontology.org/go#GO_0006348 label: chromatin silencing at telomere + SubClassOf('chromatin silencing at telomere' 'chromatin silencing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000077 label: MicroglialCell + SubClassOf('MicroglialCell' 'GlialCell') --- !New Class!: http://www.geneontology.org/go#GO_0009048 label: dosage compensation by inactivation of X chromosome + SubClassOf('dosage compensation by inactivation of X chromosome' 'dosage compensation') --- !New Class!: http://www.geneontology.org/go#GO_1901522 label: positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus' ) + SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0001200 label: metal ion regulated sequence-specific DNA binding RNA polymerase II transcription factor activity + SubClassOf('metal ion regulated sequence-specific DNA binding RNA polymerase II transcription factor activity' 'sequence-specific DNA binding RNA polymerase II transcription factor activity') + SubClassOf('metal ion regulated sequence-specific DNA binding RNA polymerase II transcription factor activity' 'metal ion regulated sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000312 label: TransverseColon + SubClassOf('TransverseColon' 'Colon') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_28009 label: Choanoflagellida + SubClassOf('Choanoflagellida' 'Opisthokonta') --- !New Class!: http://www.geneontology.org/go#GO_0010755 label: regulation of plasminogen activation + EquivalentClasses('regulation of plasminogen activation' ObjectSomeValueFrom('regulates' 'plasminogen activation') ) + SubClassOf('regulation of plasminogen activation' ObjectSomeValueFrom('regulates' 'plasminogen activation')) + SubClassOf('regulation of plasminogen activation' 'regulation of protein processing') --- !New Class!: http://www.geneontology.org/go#GO_0060906 label: negative regulation of chromatin silencing by small RNA + SubClassOf('negative regulation of chromatin silencing by small RNA' 'negative regulation of gene silencing by RNA') + SubClassOf('negative regulation of chromatin silencing by small RNA' 'negative regulation of chromatin silencing') + SubClassOf('negative regulation of chromatin silencing by small RNA' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing by small RNA')) + SubClassOf('negative regulation of chromatin silencing by small RNA' 'regulation of chromatin silencing by small RNA') + EquivalentClasses('negative regulation of chromatin silencing by small RNA' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing by small RNA') ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000076 label: MacroglialCell + SubClassOf('MacroglialCell' 'GlialCell') --- !New Class!: http://www.geneontology.org/go#GO_0033405 label: UCU codon-amino acid adaptor activity + SubClassOf('UCU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0019086 label: late viral mRNA transcription + SubClassOf('late viral mRNA transcription' 'viral transcription') + SubClassOf('late viral mRNA transcription' 'mRNA transcription') --- !New Class!: http://www.geneontology.org/go#GO_0001129 label: TBP-class protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly + SubClassOf('TBP-class protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly' 'TBP-class protein binding RNA polymerase II transcription factor activity') + SubClassOf('TBP-class protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'RNA polymerase II transcriptional preinitiation complex assembly')) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_42452 label: unclassified eukaryotes + SubClassOf('unclassified eukaryotes' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#SO_0000170 label: RNApol_II_promoter + SubClassOf('RNApol_II_promoter' 'RNA_polymerase_promoter') --- !New Class!: http://www.geneontology.org/go#GO_0033411 label: UAA codon-amino acid adaptor activity + SubClassOf('UAA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#SO_0000734 label: exemplar_mRNA + SubClassOf('exemplar_mRNA' 'mRNA') --- !New Class!: http://www.geneontology.org/go#SO_0000276 label: miRNA + SubClassOf('miRNA' ObjectSomeValueFrom('affectsTumor' 'Tumor')) + SubClassOf('miRNA' 'small_regulatory_ncRNA') + SubClassOf('miRNA' ObjectSomeValueFrom('miRNAExpressedln' 'process')) + SubClassOf('miRNA' ObjectSomeValueFrom('upRegulateEvent' 'processual_entity')) + SubClassOf('miRNA' ObjectSomeValueFrom('regulateTarget' 'gene')) + SubClassOf('miRNA' ObjectSomeValueFrom('hasBinding' 'MiRNABinding')) + SubClassOf('miRNA' ObjectSomeValueFrom('regulateEvent' 'processual_entity')) + SubClassOf('miRNA' ObjectSomeValueFrom('inOrgan' 'AnatomicFeature')) + SubClassOf('miRNA' ObjectSomeValueFrom('regulatemRNATranslation' 'mRNA')) + SubClassOf('miRNA' ObjectSomeValueFrom('upRegulateTarget' 'gene')) + SubClassOf('miRNA' ObjectSomeValueFrom('inOrganism' 'Organism')) + SubClassOf('miRNA' ObjectSomeValueFrom('regulatencRNAFunction' 'ncRNA')) + SubClassOf('miRNA' ObjectSomeValueFrom('downRegulateTarget' 'gene')) + SubClassOf('miRNA' ObjectSomeValueFrom('derives_from' 'miRNA_primary_transcript')) + SubClassOf('miRNA' ObjectSomeValueFrom('downRegulateEvent' 'processual_entity')) --- !New Class!: http://www.geneontology.org/go#GO_0044326 label: dendritic spine neck + SubClassOf('dendritic spine neck' ObjectSomeValueFrom('part_of' 'dendritic spine')) + SubClassOf('dendritic spine neck' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0060146 label: host gene silencing in virus induced gene silencing + SubClassOf('host gene silencing in virus induced gene silencing' 'posttranscriptional gene silencing') --- !New Class!: http://www.geneontology.org/go#GO_0070934 label: CRD-mediated mRNA stabilization + SubClassOf('CRD-mediated mRNA stabilization' 'mRNA stabilization') --- !New Class!: http://www.geneontology.org/go#GO_0000449 label: endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) + SubClassOf('endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)' 'endonucleolytic cleavage involved in rRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0002935 label: tRNA (adenine-C2-)-methyltransferase activity + SubClassOf('tRNA (adenine-C2-)-methyltransferase activity' 'tRNA (adenine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0051720 label: DNA (cytosine-5-)-methyltransferase activity, acting on CpNpG substrates + SubClassOf('DNA (cytosine-5-)-methyltransferase activity, acting on CpNpG substrates' 'DNA (cytosine-5-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#SO_0000621 label: RNApol_III_promoter_type_3 + SubClassOf('RNApol_III_promoter_type_3' 'RNApol_III_promoter') --- !New Class!: http://www.geneontology.org/go#MOD_00670 label: N-acylated residue + SubClassOf('N-acylated residue' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_0030490 label: maturation of SSU-rRNA + SubClassOf('maturation of SSU-rRNA' 'rRNA processing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000258 label: Vein + SubClassOf('Vein' 'CardiovascularFeature') --- !New Class!: http://www.geneontology.org/go#GO_0002143 label: tRNA wobble position uridine thiolation + SubClassOf('tRNA wobble position uridine thiolation' 'tRNA thio-modification') + SubClassOf('tRNA wobble position uridine thiolation' 'tRNA wobble uridine modification') --- !New Class!: http://www.geneontology.org/go#GO_0032590 label: dendrite membrane + SubClassOf('dendrite membrane' 'neuron projection membrane') --- !New Class!: http://www.geneontology.org/go#GO_0045944 label: positive regulation of transcription from RNA polymerase II promoter + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of phosphatidylcholine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('positive regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter')) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in heart development' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of sodium ion transport by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of phospholipid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of ethanol catabolic process by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription involved in G1/S transition of mitotic cell cycle' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of sulfite transport by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter during mitosis' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response' 'positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in norepinephrine biosynthetic process' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation' 'positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in defense response to fungus' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0061402 label: positive regulation of transcription from RNA polymerase II promoter in response to acidity + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to acidity' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0031940 label: positive regulation of chromatin silencing at telomere + SubClassOf('positive regulation of chromatin silencing at telomere' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing at telomere')) + SubClassOf('positive regulation of chromatin silencing at telomere' 'positive regulation of chromatin silencing') + EquivalentClasses('positive regulation of chromatin silencing at telomere' ObjectSomeValueFrom('positively_regulates' 'chromatin silencing at telomere') ) + SubClassOf('positive regulation of chromatin silencing at telomere' 'regulation of chromatin silencing at telomere') --- !New Class!: http://www.geneontology.org/go#OMIT_0000220 label: MixedPulmonaryAdenocarcinoma + SubClassOf('MixedPulmonaryAdenocarcinoma' 'PulmonaryAdenocarcinoma') --- !New Class!: http://www.geneontology.org/go#GO_0061400 label: positive regulation of transcription from RNA polymerase II promoter in response to calcium ion + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to calcium ion' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0070028 label: regulation of transcription by carbon monoxide + SubClassOf('regulation of transcription by carbon monoxide' 'regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#OMIT_0000807 label: PositiveStrandInsertion + SubClassOf('PositiveStrandInsertion' 'TEInsertion') --- !New Class!: http://www.geneontology.org/go#GO_0090065 label: regulation of production of siRNA involved in RNA interference + SubClassOf('regulation of production of siRNA involved in RNA interference' 'regulation of RNA interference') + EquivalentClasses('regulation of production of siRNA involved in RNA interference' ObjectSomeValueFrom('regulates' 'production of siRNA involved in RNA interference') ) + SubClassOf('regulation of production of siRNA involved in RNA interference' 'regulation of production of small RNA involved in gene silencing by RNA') + SubClassOf('regulation of production of siRNA involved in RNA interference' ObjectSomeValueFrom('regulates' 'production of siRNA involved in RNA interference')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000193 label: FollicularLymphoma + SubClassOf('FollicularLymphoma' 'MatureBCellNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0008293 label: torso signaling pathway + SubClassOf('torso signaling pathway' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0001720 label: conversion of lysyl-tRNA to pyrrolysyl-tRNA + SubClassOf('conversion of lysyl-tRNA to pyrrolysyl-tRNA' 'charged-tRNA amino acid modification') --- !New Class!: http://www.geneontology.org/go#GO_0000179 label: rRNA (adenine-N6,N6-)-dimethyltransferase activity + SubClassOf('rRNA (adenine-N6,N6-)-dimethyltransferase activity' 'rRNA (adenine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0070055 label: HAC1-type intron splice site recognition and cleavage + SubClassOf('HAC1-type intron splice site recognition and cleavage' 'RNA processing') + SubClassOf('HAC1-type intron splice site recognition and cleavage' ObjectSomeValueFrom('part_of' 'mRNA splicing, via endonucleolytic cleavage and ligation')) --- !New Class!: http://www.geneontology.org/go#SO_0000902 label: transgene + SubClassOf('transgene' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0061413 label: regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source + SubClassOf('regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source' 'carbon catabolite regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0000455 label: enzyme-directed rRNA pseudouridine synthesis + SubClassOf('enzyme-directed rRNA pseudouridine synthesis' 'rRNA pseudouridine synthesis') --- !New Class!: http://www.geneontology.org/go#GO_2001124 label: regulation of translational frameshifting + EquivalentClasses('regulation of translational frameshifting' ObjectSomeValueFrom('regulates' 'translational frameshifting') ) + SubClassOf('regulation of translational frameshifting' ObjectSomeValueFrom('regulates' 'translational frameshifting')) + SubClassOf('regulation of translational frameshifting' 'regulation of translational elongation') --- !New Class!: http://www.geneontology.org/go#span_ScatteredSpatiotemporalRegion label: scattered_spatiotemporal_region + SubClassOf('scattered_spatiotemporal_region' 'spatiotemporal_region') + DisjointClasses('connected_spatiotemporal_region' 'scattered_spatiotemporal_region') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_9596 label: Pan + SubClassOf('Pan' 'Homininae') --- !New Class!: http://www.geneontology.org/go#OMIT_0000233 label: Chemotherapy + SubClassOf('Chemotherapy' 'PharmaceuticalTreatment') --- !New Class!: http://www.geneontology.org/go#GO_1900418 label: positive regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('positive regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#SO_0000483 label: nc_primary_transcript + SubClassOf('nc_primary_transcript' 'primary_transcript') --- !New Class!: http://www.geneontology.org/go#GO_0001206 label: RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription + SubClassOf('RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' 'RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription') + SubClassOf('RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' 'RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0043923 label: positive regulation by host of viral transcription + SubClassOf('positive regulation by host of viral transcription' 'modulation by host of viral transcription') + SubClassOf('positive regulation by host of viral transcription' 'positive regulation of viral transcription') --- !New Class!: http://www.geneontology.org/go#OMIT_0000130 label: OrganSystemDisease + SubClassOf('OrganSystemDisease' 'Disease') --- !New Class!: http://www.geneontology.org/go#GO_0052907 label: 23S rRNA (adenine(1618)-N(6))-methyltransferase activity + SubClassOf('23S rRNA (adenine(1618)-N(6))-methyltransferase activity' 'rRNA (adenine-N6-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_1901407 label: regulation of phosphorylation of RNA polymerase II C-terminal domain + SubClassOf('regulation of phosphorylation of RNA polymerase II C-terminal domain' ObjectSomeValueFrom('regulates' 'phosphorylation of RNA polymerase II C-terminal domain')) + EquivalentClasses('regulation of phosphorylation of RNA polymerase II C-terminal domain' ObjectSomeValueFrom('regulates' 'phosphorylation of RNA polymerase II C-terminal domain') ) --- !New Class!: http://www.geneontology.org/go#GO_0016539 label: intein-mediated protein splicing + SubClassOf('intein-mediated protein splicing' 'protein splicing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000070 label: CD8 + SubClassOf('CD8' 'TLymphocytes') --- !New Class!: http://www.geneontology.org/go#GO_0046778 label: modification by virus of host mRNA processing + SubClassOf('modification by virus of host mRNA processing' 'modulation by virus of host gene expression') --- !New Class!: http://www.geneontology.org/go#OMIT_0000247 label: EndocrineOrgan + SubClassOf('EndocrineOrgan' 'AnatomicFeature') --- !New Class!: http://www.geneontology.org/go#GO_0035511 label: oxidative DNA demethylation + SubClassOf('oxidative DNA demethylation' 'DNA demethylation') --- !New Class!: http://www.geneontology.org/go#PR_000025513 label: modified amino-acid residue + SubClassOf('modified amino-acid residue' 'amino-acid residue') --- !New Class!: http://www.geneontology.org/go#OMIT_0000230 label: AntibioticTreatment + SubClassOf('AntibioticTreatment' 'PharmaceuticalTreatment') --- !New Class!: http://www.geneontology.org/go#SO_0000692 label: gene_with_dicistronic_transcript + SubClassOf('gene_with_dicistronic_transcript' 'gene_with_polycistronic_transcript') --- !New Class!: http://www.geneontology.org/go#GO_0000122 label: negative regulation of transcription from RNA polymerase II promoter + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of phosphatidylserine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter involved in heart development' ) + SubClassOf('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription, DNA-dependent') + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of pseudohyphal growth by negative regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of mating type switching by negative regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cellular hyperosmotic salinity response by negative regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cellular response to alkalinity by negative regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('negative regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of filamentous growth of a population of unicellular organisms in response to starvation by negative regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription involved in G1/S transition of mitotic cell cycle' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('negative regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase II promoter')) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'positive regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transmembrane transport by negative regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of arginine catabolic process by negative regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of invasive growth in response to glucose limitation by negative regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of ceramide biosynthetic process by negative regulation of transcription from RNA Polymerase II promoter' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'regulation of transport by negative regulation of transcription from RNA polymerase II promoter' ) + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase II promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_0019082 label: viral protein processing + SubClassOf('viral protein processing' 'protein processing') + SubClassOf('viral protein processing' ObjectSomeValueFrom('part_of' 'viral genome expression')) --- !New Class!: http://www.geneontology.org/go#GO_0075522 label: IRES-dependent viral translational initiation + SubClassOf('IRES-dependent viral translational initiation' ObjectSomeValueFrom('part_of' 'viral translation')) + SubClassOf('IRES-dependent viral translational initiation' 'IRES-dependent translational initiation') --- !New Class!: http://www.geneontology.org/go#GO_0001063 label: plastid PEP-B RNA polymerase activity + SubClassOf('plastid PEP-B RNA polymerase activity' 'bacterial-type RNA polymerase activity') + SubClassOf('plastid PEP-B RNA polymerase activity' ObjectSomeValueFrom('part_of' 'transcription from plastid promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0033424 label: CCG codon-amino acid adaptor activity + SubClassOf('CCG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#snap_Quality label: quality + SubClassOf('quality' 'specifically_dependent_continuant') + DisjointClasses('quality' 'realizable_entity') --- !New Class!: http://www.geneontology.org/go#GO_0001020 label: RNA polymerase III type 3 promoter transcriptional preinitiation complex assembly + SubClassOf('RNA polymerase III type 3 promoter transcriptional preinitiation complex assembly' 'RNA polymerase III transcriptional preinitiation complex assembly') + SubClassOf('RNA polymerase III type 3 promoter transcriptional preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase III type 3 promoter')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000169 label: KaposiSarcoma + SubClassOf('KaposiSarcoma' 'IntermediateGradeNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0010944 label: negative regulation of transcription by competitive promoter binding + SubClassOf('negative regulation of transcription by competitive promoter binding' 'negative regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0033460 label: GAG codon-amino acid adaptor activity + SubClassOf('GAG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#snap_TwoDimensionalRegion label: two_dimensional_region + DisjointClasses('one_dimensional_region' 'two_dimensional_region') + DisjointClasses('two_dimensional_region' 'zero_dimensional_region') + SubClassOf('two_dimensional_region' 'spatial_region') + DisjointClasses('three_dimensional_region' 'two_dimensional_region') --- !New Class!: http://www.geneontology.org/go#BFO_0000024 label: fiat object + SubClassOf('fiat object' 'material_entity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000806 label: AdvantageousRegulation + SubClassOf('AdvantageousRegulation' ObjectSomeValueFrom('resultedFrom' 'TEInsertion')) + SubClassOf('AdvantageousRegulation' 'Regulation') --- !New Class!: http://www.geneontology.org/go#GO_0001118 label: transcription ternary complex disassembly + SubClassOf('transcription ternary complex disassembly' ObjectSomeValueFrom('part_of' 'DNA-dependent transcription, termination')) --- !New Class!: http://www.geneontology.org/go#GO_0044302 label: dentate gyrus mossy fiber + SubClassOf('dentate gyrus mossy fiber' 'axon') --- !New Class!: http://www.geneontology.org/go#SO_0001672 label: bacterial_RNApol_promoter_sigma54 + SubClassOf('bacterial_RNApol_promoter_sigma54' 'bacterial_RNApol_promoter') --- !New Class!: http://www.geneontology.org/go#GO_0036003 label: positive regulation of transcription from RNA polymerase II promoter in response to stress + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to stress' 'regulation of transcription from RNA polymerase II promoter in response to stress') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to stress' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#SO_0001269 label: SRP_RNA_gene + SubClassOf('SRP_RNA_gene' 'ncRNA_gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000207 label: Hemangiopericytoma + SubClassOf('Hemangiopericytoma' 'Carcinoma') --- !New Class!: http://www.geneontology.org/go#GO_0046021 label: regulation of transcription from RNA polymerase II promoter, mitotic + SubClassOf('regulation of transcription from RNA polymerase II promoter, mitotic' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter, mitotic' ) + SubClassOf('regulation of transcription from RNA polymerase II promoter, mitotic' 'regulation of transcription during mitosis') --- !New Class!: http://www.geneontology.org/go#GO_0061312 label: BMP signaling pathway involved in heart development + SubClassOf('BMP signaling pathway involved in heart development' 'regulation of transcription from RNA polymerase II promoter involved in heart development') + SubClassOf('BMP signaling pathway involved in heart development' 'BMP signaling pathway') + EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in heart development' ) + EquivalentClasses('BMP signaling pathway involved in regulation of secondary heart field cardioblast proliferation' 'BMP signaling pathway involved in heart development' ) --- !New Class!: http://www.geneontology.org/go#GO_0070134 label: positive regulation of mitochondrial translational initiation + SubClassOf('positive regulation of mitochondrial translational initiation' ObjectSomeValueFrom('positively_regulates' 'mitochondrial translational initiation')) + SubClassOf('positive regulation of mitochondrial translational initiation' 'positive regulation of translational initiation') + EquivalentClasses('positive regulation of mitochondrial translational initiation' ObjectSomeValueFrom('positively_regulates' 'mitochondrial translational initiation') ) + SubClassOf('positive regulation of mitochondrial translational initiation' 'regulation of mitochondrial translational initiation') --- !New Class!: http://www.geneontology.org/go#GO_0001717 label: conversion of seryl-tRNAsec to selenocys-tRNAsec + SubClassOf('conversion of seryl-tRNAsec to selenocys-tRNAsec' 'charged-tRNA amino acid modification') --- !New Class!: http://www.geneontology.org/go#OMIT_0000275 label: Atria + SubClassOf('Atria' 'Heart') --- !New Class!: http://www.geneontology.org/go#GO_0010426 label: DNA methylation on cytosine within a CHH sequence + SubClassOf('DNA methylation on cytosine within a CHH sequence' 'DNA methylation on cytosine') --- !New Class!: http://www.geneontology.org/go#GO_0060804 label: positive regulation of Wnt receptor signaling pathway by BMP signaling pathway + EquivalentClasses('BMP signaling pathway' 'positive regulation of Wnt receptor signaling pathway by BMP signaling pathway' ) + SubClassOf('positive regulation of Wnt receptor signaling pathway by BMP signaling pathway' 'BMP signaling pathway') --- !New Class!: http://www.geneontology.org/go#OMIT_0000285 label: LeftVentricle + SubClassOf('LeftVentricle' 'Ventricles') --- !New Class!: http://www.geneontology.org/go#GO_0032933 label: SREBP signaling pathway + SubClassOf('SREBP signaling pathway' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0010954 label: positive regulation of protein processing + SubClassOf('positive regulation of protein processing' ObjectSomeValueFrom('positively_regulates' 'protein processing')) + SubClassOf('positive regulation of protein processing' 'regulation of protein processing') + EquivalentClasses('positive regulation of protein processing' ObjectSomeValueFrom('positively_regulates' 'protein processing') ) --- !New Class!: http://www.geneontology.org/go#GO_0031048 label: chromatin silencing by small RNA + SubClassOf('chromatin silencing by small RNA' 'gene silencing by RNA') + SubClassOf('chromatin silencing by small RNA' 'chromatin silencing') --- !New Class!: http://www.geneontology.org/go#GO_0000970 label: tRNA exon ligation utilizing GTP as source of linkage phosphate + SubClassOf('tRNA exon ligation utilizing GTP as source of linkage phosphate' 'tRNA exon ligation') --- !New Class!: http://www.geneontology.org/go#GO_0002184 label: cytoplasmic translational termination + SubClassOf('cytoplasmic translational termination' 'translational termination') + SubClassOf('cytoplasmic translational termination' ObjectSomeValueFrom('part_of' 'cytoplasmic translation')) --- !New Class!: http://www.geneontology.org/go#GO_1900446 label: negative regulation of tRNA transcription from RNA polymerase III promoter + SubClassOf('negative regulation of tRNA transcription from RNA polymerase III promoter' ObjectSomeValueFrom('negatively_regulates' 'tRNA transcription from RNA polymerase III promoter')) + SubClassOf('negative regulation of tRNA transcription from RNA polymerase III promoter' 'negative regulation of transcription from RNA polymerase III promoter') + EquivalentClasses('negative regulation of tRNA transcription from RNA polymerase III promoter' ObjectSomeValueFrom('negatively_regulates' 'tRNA transcription from RNA polymerase III promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_0030450 label: regulation of complement activation, classical pathway + SubClassOf('regulation of complement activation, classical pathway' 'regulation of complement activation') --- !New Class!: http://www.geneontology.org/go#GO_1900460 label: negative regulation of invasive growth in response to glucose limitation by negative regulation of transcription from RNA polymerase II promoter + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of invasive growth in response to glucose limitation by negative regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('negative regulation of invasive growth in response to glucose limitation by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0033443 label: AAA codon-amino acid adaptor activity + SubClassOf('AAA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000311 label: DescendingColon + SubClassOf('DescendingColon' 'Colon') --- !New Class!: http://www.geneontology.org/go#GO_0006446 label: regulation of translational initiation + SubClassOf('regulation of translational initiation' ObjectSomeValueFrom('regulates' 'translational initiation')) + EquivalentClasses('regulation of translational initiation' ObjectSomeValueFrom('regulates' 'translational initiation') ) + SubClassOf('regulation of translational initiation' 'regulation of translation') --- !New Class!: http://www.geneontology.org/go#GO_0019080 label: viral genome expression + SubClassOf('viral genome expression' 'gene expression') --- !New Class!: http://www.geneontology.org/go#span_TemporalInterval label: temporal_interval + SubClassOf('temporal_interval' 'connected_temporal_region') + DisjointClasses('temporal_instant' 'temporal_interval') --- !New Class!: http://www.geneontology.org/go#GO_2000730 label: regulation of termination of RNA polymerase I transcription + SubClassOf('regulation of termination of RNA polymerase I transcription' 'regulation of DNA-dependent transcription, termination') + EquivalentClasses('regulation of termination of RNA polymerase I transcription' ObjectSomeValueFrom('regulates' 'termination of RNA polymerase I transcription') ) + SubClassOf('regulation of termination of RNA polymerase I transcription' 'regulation of transcription from RNA polymerase I promoter') + SubClassOf('regulation of termination of RNA polymerase I transcription' ObjectSomeValueFrom('regulates' 'termination of RNA polymerase I transcription')) --- !New Class!: http://www.geneontology.org/go#GO_0006346 label: methylation-dependent chromatin silencing + SubClassOf('methylation-dependent chromatin silencing' 'chromatin silencing') --- !New Class!: http://www.geneontology.org/go#GO_0034243 label: regulation of transcription elongation from RNA polymerase II promoter + SubClassOf('regulation of transcription elongation from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription elongation from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription elongation from RNA polymerase II promoter') ) + SubClassOf('regulation of transcription elongation from RNA polymerase II promoter' 'regulation of DNA-dependent transcription, elongation') + SubClassOf('regulation of transcription elongation from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription elongation from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0043620 label: regulation of DNA-dependent transcription in response to stress + SubClassOf('regulation of DNA-dependent transcription in response to stress' 'regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0030743 label: rRNA (adenosine-2'-O-)-methyltransferase activity + SubClassOf('rRNA (adenosine-2'-O-)-methyltransferase activity' 'rRNA (adenine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000222 label: SolidPulmonaryAdenocarcinoma + SubClassOf('SolidPulmonaryAdenocarcinoma' 'PulmonaryAdenocarcinoma') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_32523 label: Tetrapoda + SubClassOf('Tetrapoda' 'Dipnotetrapodomorpha') --- !New Class!: http://www.geneontology.org/go#OMIT_0000350 label: CranialNerves + SubClassOf('CranialNerves' 'PeripheralNerves') --- !New Class!: http://www.geneontology.org/go#GO_0002195 label: 2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine-tRNA biosynthesis + SubClassOf('2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine-tRNA biosynthesis' 'tRNA modification') --- !New Class!: http://www.geneontology.org/go#GO_0038176 label: positive regulation of SREBP signaling pathway in response to decreased oxygen levels + SubClassOf('positive regulation of SREBP signaling pathway in response to decreased oxygen levels' 'positive regulation of SREBP signaling pathway') --- !New Class!: http://www.geneontology.org/go#GO_0036416 label: tRNA stabilization + SubClassOf('tRNA stabilization' 'regulation of tRNA stability') + SubClassOf('tRNA stabilization' 'RNA stabilization') --- !New Class!: http://www.geneontology.org/go#GO_0070154 label: mitochondrial lysyl-tRNA aminoacylation + SubClassOf('mitochondrial lysyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') + SubClassOf('mitochondrial lysyl-tRNA aminoacylation' 'lysyl-tRNA aminoacylation') + EquivalentClasses('lysyl-tRNA aminoacylation' 'mitochondrial lysyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0043144 label: snoRNA processing + SubClassOf('snoRNA processing' 'ncRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0001027 label: RNA polymerase III type 1 promoter TFIIIB-type transcription factor activity + SubClassOf('RNA polymerase III type 1 promoter TFIIIB-type transcription factor activity' 'TFIIIB-type transcription factor activity') + SubClassOf('RNA polymerase III type 1 promoter TFIIIB-type transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III type 1 promoter transcriptional preinitiation complex assembly')) --- !New Class!: http://www.geneontology.org/go#GO_0000475 label: maturation of 2S rRNA + SubClassOf('maturation of 2S rRNA' 'rRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0000154 label: rRNA modification + SubClassOf('rRNA modification' 'rRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0006397 label: mRNA processing + SubClassOf('mRNA processing' 'RNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0033430 label: CGC codon-amino acid adaptor activity + SubClassOf('CGC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_1900370 label: positive regulation of RNA interference + SubClassOf('positive regulation of RNA interference' 'regulation of RNA interference') + EquivalentClasses('positive regulation of RNA interference' ObjectSomeValueFrom('positively_regulates' 'RNA interference') ) + SubClassOf('positive regulation of RNA interference' 'positive regulation of posttranscriptional gene silencing') + SubClassOf('positive regulation of RNA interference' ObjectSomeValueFrom('positively_regulates' 'RNA interference')) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_7777 label: Chondrichthyes + SubClassOf('Chondrichthyes' 'Gnathostomata') --- !New Class!: http://www.geneontology.org/go#GO_0000245 label: spliceosomal complex assembly + SubClassOf('spliceosomal complex assembly' ObjectSomeValueFrom('part_of' 'mRNA splicing, via spliceosome')) --- !New Class!: http://www.geneontology.org/go#GO_0035947 label: regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_0061393 label: positive regulation of transcription from RNA polymerase II promoter in response to osmotic stress + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to osmotic stress' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to osmotic stress' 'regulation of transcription from RNA polymerase II promoter in response to osmotic stress') --- !New Class!: http://www.geneontology.org/go#OMIT_0000136 label: PrionDisease + SubClassOf('PrionDisease' 'Infection') --- !New Class!: http://www.geneontology.org/go#GO_0090236 label: regulation of transcription from RNA polymerase II promoter involved in somitogenesis + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in somitogenesis' ) + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in somitogenesis' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0009300 label: antisense RNA transcription + SubClassOf('antisense RNA transcription' 'transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0044542 label: plasminogen activation in other organism + SubClassOf('plasminogen activation in other organism' 'plasminogen activation') + SubClassOf('plasminogen activation in other organism' 'zymogen activation in other organism') --- !New Class!: http://www.geneontology.org/go#GO_0071030 label: nuclear mRNA surveillance of spliceosomal pre-mRNA splicing + SubClassOf('nuclear mRNA surveillance of spliceosomal pre-mRNA splicing' ObjectSomeValueFrom('has_part' 'nuclear polyadenylation-dependent mRNA catabolic process')) --- !New Class!: http://www.geneontology.org/go#GO_0031564 label: transcription antitermination + SubClassOf('transcription antitermination' 'transcriptional attenuation') --- !New Class!: http://www.geneontology.org/go#OMIT_0000041 label: HarmfulEnvironmentalEffect + SubClassOf('HarmfulEnvironmentalEffect' 'HarmfulRole') --- !New Class!: http://www.geneontology.org/go#GO_0000964 label: mitochondrial RNA 5'-end processing + EquivalentClasses('mitochondrial RNA 5'-end processing' 'RNA 5'-end processing' ) + SubClassOf('mitochondrial RNA 5'-end processing' 'RNA 5'-end processing') + SubClassOf('mitochondrial RNA 5'-end processing' 'mitochondrial RNA processing') --- !New Class!: http://www.geneontology.org/go#SO_1001261 label: recoded_mRNA + SubClassOf('recoded_mRNA' 'mRNA') --- !New Class!: http://www.geneontology.org/go#GO_0006449 label: regulation of translational termination + SubClassOf('regulation of translational termination' 'regulation of translation') + SubClassOf('regulation of translational termination' ObjectSomeValueFrom('regulates' 'translational termination')) + EquivalentClasses('regulation of translational termination' ObjectSomeValueFrom('regulates' 'translational termination') ) --- !New Class!: http://www.geneontology.org/go#GO_0016423 label: tRNA (guanine) methyltransferase activity + SubClassOf('tRNA (guanine) methyltransferase activity' 'tRNA methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000086 label: TumorSuppressingMiRNA + SubClassOf('TumorSuppressingMiRNA' 'miRNA') --- !New Class!: http://www.geneontology.org/go#MOD_01149 label: sumoylated lysine + SubClassOf('sumoylated lysine' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_0046023 label: regulation of transcription from RNA polymerase III promoter, mitotic + EquivalentClasses('regulation of transcription from RNA polymerase III promoter' 'regulation of transcription from RNA polymerase III promoter, mitotic' ) + SubClassOf('regulation of transcription from RNA polymerase III promoter, mitotic' 'regulation of transcription from RNA polymerase III promoter') + SubClassOf('regulation of transcription from RNA polymerase III promoter, mitotic' 'regulation of transcription during mitosis') --- !New Class!: http://www.geneontology.org/go#OMIT_0000146 label: BenignNeoplasm + SubClassOf('BenignNeoplasm' 'Tumor') --- !New Class!: http://www.geneontology.org/go#GO_0035950 label: regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_0030371 label: translation repressor activity + SubClassOf('translation repressor activity' ObjectSomeValueFrom('part_of' 'negative regulation of translation')) + SubClassOf('translation repressor activity' 'translation regulator activity') --- !New Class!: http://www.geneontology.org/go#GO_0006306 label: DNA methylation + SubClassOf('DNA methylation' 'regulation of gene expression, epigenetic') + EquivalentClasses('DNA methylation' 'DNA methylation involved in embryo development' ) + EquivalentClasses('DNA methylation' 'DNA methylation involved in gamete generation' ) --- !New Class!: http://www.geneontology.org/go#GO_0010621 label: negative regulation of transcription by transcription factor localization + SubClassOf('negative regulation of transcription by transcription factor localization' 'negative regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#MOD_00115 label: S-palmitoyl-L-cysteine + SubClassOf('S-palmitoyl-L-cysteine' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_0006388 label: tRNA splicing, via endonucleolytic cleavage and ligation + SubClassOf('tRNA splicing, via endonucleolytic cleavage and ligation' 'RNA splicing, via endonucleolytic cleavage and ligation') + SubClassOf('tRNA splicing, via endonucleolytic cleavage and ligation' 'tRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0046024 label: positive regulation of transcription from RNA polymerase III promoter during mitosis + EquivalentClasses('positive regulation of transcription from RNA polymerase III promoter' 'positive regulation of transcription from RNA polymerase III promoter during mitosis' ) + SubClassOf('positive regulation of transcription from RNA polymerase III promoter during mitosis' 'positive regulation of transcription from RNA polymerase III promoter') + SubClassOf('positive regulation of transcription from RNA polymerase III promoter during mitosis' 'positive regulation of transcription during mitosis') + SubClassOf('positive regulation of transcription from RNA polymerase III promoter during mitosis' 'regulation of transcription from RNA polymerase III promoter, mitotic') --- !New Class!: http://www.geneontology.org/go#MOD_00693 label: glycosylated residue + SubClassOf('glycosylated residue' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_0031438 label: negative regulation of mRNA cleavage + SubClassOf('negative regulation of mRNA cleavage' 'negative regulation of mRNA processing') + SubClassOf('negative regulation of mRNA cleavage' 'regulation of mRNA cleavage') + EquivalentClasses('negative regulation of mRNA cleavage' ObjectSomeValueFrom('negatively_regulates' 'mRNA cleavage') ) + SubClassOf('negative regulation of mRNA cleavage' ObjectSomeValueFrom('negatively_regulates' 'mRNA cleavage')) --- !New Class!: http://www.geneontology.org/go#GO_0046011 label: regulation of oskar mRNA translation + SubClassOf('regulation of oskar mRNA translation' 'regulation of translation') --- !New Class!: http://www.geneontology.org/go#OMIT_0000125 label: EndocrineDisease + SubClassOf('EndocrineDisease' 'Disease') --- !New Class!: http://www.geneontology.org/go#GO_0030846 label: termination of RNA polymerase II transcription, poly(A)-coupled + SubClassOf('termination of RNA polymerase II transcription, poly(A)-coupled' 'termination of RNA polymerase II transcription') --- !New Class!: http://www.geneontology.org/go#GO_0042345 label: regulation of NF-kappaB import into nucleus + EquivalentClasses('regulation of NF-kappaB import into nucleus' ObjectSomeValueFrom('regulates' 'NF-kappaB import into nucleus') ) + SubClassOf('regulation of NF-kappaB import into nucleus' ObjectSomeValueFrom('regulates' 'NF-kappaB import into nucleus')) + SubClassOf('regulation of NF-kappaB import into nucleus' 'regulation of I-kappaB kinase/NF-kappaB cascade') --- !New Class!: http://www.geneontology.org/go#GO_0030514 label: negative regulation of BMP signaling pathway + EquivalentClasses('negative regulation of BMP signaling pathway' ObjectSomeValueFrom('negatively_regulates' 'BMP signaling pathway') ) + SubClassOf('negative regulation of BMP signaling pathway' ObjectSomeValueFrom('negatively_regulates' 'BMP signaling pathway')) + SubClassOf('negative regulation of BMP signaling pathway' 'regulation of BMP signaling pathway') --- !New Class!: http://www.geneontology.org/go#GO_0000365 label: mRNA trans splicing, via spliceosome + SubClassOf('mRNA trans splicing, via spliceosome' 'mRNA splicing, via spliceosome') --- !New Class!: http://www.geneontology.org/go#GO_0004479 label: methionyl-tRNA formyltransferase activity + SubClassOf('methionyl-tRNA formyltransferase activity' ObjectSomeValueFrom('part_of' 'conversion of methionyl-tRNA to N-formyl-methionyl-tRNA')) + SubClassOf('methionyl-tRNA formyltransferase activity' ObjectSomeValueFrom('part_of' 'translational initiation')) --- !New Class!: http://www.geneontology.org/go#GO_0043921 label: modulation by host of viral transcription + SubClassOf('modulation by host of viral transcription' 'regulation of viral transcription') --- !New Class!: http://www.geneontology.org/go#GO_0090282 label: positive regulation of transcription involved in G2/M transition of mitotic cell cycle + SubClassOf('positive regulation of transcription involved in G2/M transition of mitotic cell cycle' 'regulation of transcription involved in G2/M transition of mitotic cell cycle') + EquivalentClasses('positive regulation of transcription, DNA-dependent' 'positive regulation of transcription involved in G2/M transition of mitotic cell cycle' ) + SubClassOf('positive regulation of transcription involved in G2/M transition of mitotic cell cycle' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0033461 label: GGU codon-amino acid adaptor activity + SubClassOf('GGU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000172 label: LangerhansCellHistiocytosis + SubClassOf('LangerhansCellHistiocytosis' 'LeukemiaAndLymphoma') --- !New Class!: http://www.geneontology.org/go#GO_0003258 label: regulation of transcription from RNA polymerase II promoter involved in endocardial precursor cell differentiation + EquivalentClasses('regulation of transcription from RNA polymerase II promoter involved in endocardial precursor cell differentiation' 'regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in endocardial precursor cell differentiation' 'regulation of transcription from RNA polymerase II promoter involved in heart development') --- !New Class!: http://www.geneontology.org/go#GO_0097394 label: telomeric RNA transcription from RNA pol II promoter + SubClassOf('telomeric RNA transcription from RNA pol II promoter' 'telomeric RNA transcription') + SubClassOf('telomeric RNA transcription from RNA pol II promoter' 'transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0044636 label: envenomation resulting in modulation of complement activation, classical pathway in other organism + SubClassOf('envenomation resulting in modulation of complement activation, classical pathway in other organism' ObjectSomeValueFrom('has_part' 'modulation of complement activation, classical pathway in other organism')) --- !New Class!: http://www.geneontology.org/go#GO_0044303 label: axon collateral + SubClassOf('axon collateral' 'axon part') --- !New Class!: http://www.geneontology.org/go#GO_0044304 label: main axon + SubClassOf('main axon' 'axon part') --- !New Class!: http://www.geneontology.org/go#GO_0003708 label: retinoic acid receptor activity + SubClassOf('retinoic acid receptor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0000384 label: first spliceosomal transesterification activity + SubClassOf('first spliceosomal transesterification activity' ObjectSomeValueFrom('part_of' 'RNA splicing, via transesterification reactions')) --- !New Class!: http://www.geneontology.org/go#GO_0033418 label: CUC codon-amino acid adaptor activity + SubClassOf('CUC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0045958 label: positive regulation of complement activation, alternative pathway + SubClassOf('positive regulation of complement activation, alternative pathway' 'regulation of complement activation, alternative pathway') + SubClassOf('positive regulation of complement activation, alternative pathway' 'positive regulation of complement activation') --- !New Class!: http://www.geneontology.org/go#GO_0019802 label: cyclization of glutamine involved in intein-mediated protein splicing + SubClassOf('cyclization of glutamine involved in intein-mediated protein splicing' ObjectSomeValueFrom('part_of' 'intein-mediated protein splicing')) --- !New Class!: http://www.geneontology.org/go#GO_0007360 label: positive regulation of posterior gap gene transcription + SubClassOf('positive regulation of posterior gap gene transcription' 'regulation of transcription involved in anterior/posterior axis specification') + SubClassOf('positive regulation of posterior gap gene transcription' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#SO_0000456 label: recombinationally_rearranged_gene + SubClassOf('recombinationally_rearranged_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0043619 label: regulation of transcription from RNA polymerase II promoter in response to oxidative stress + SubClassOf('regulation of transcription from RNA polymerase II promoter in response to oxidative stress' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0036404 label: conversion of ds siRNA to ss siRNA + SubClassOf('conversion of ds siRNA to ss siRNA' ObjectSomeValueFrom('part_of' 'dsRNA fragmentation')) + SubClassOf('conversion of ds siRNA to ss siRNA' 'RNA processing') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_33630 label: Alveolata + SubClassOf('Alveolata' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#OMIT_0000314 label: ParathyroidGlands + SubClassOf('ParathyroidGlands' 'EndocrineOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0060815 label: regulation of translation involved in anterior/posterior axis specification + SubClassOf('regulation of translation involved in anterior/posterior axis specification' 'regulation of translation') + EquivalentClasses('regulation of translation' 'regulation of translation involved in anterior/posterior axis specification' ) --- !New Class!: http://www.geneontology.org/go#GO_0001181 label: core RNA polymerase I binding transcription factor activity + SubClassOf('core RNA polymerase I binding transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase I promoter')) --- !New Class!: http://www.geneontology.org/go#SO_0000171 label: RNApol_III_promoter + SubClassOf('RNApol_III_promoter' 'RNA_polymerase_promoter') --- !New Class!: http://www.geneontology.org/go#MOD_00818 label: glycosylphosphatidylinositolated residue + SubClassOf('glycosylphosphatidylinositolated residue' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_2000640 label: positive regulation of SREBP signaling pathway + SubClassOf('positive regulation of SREBP signaling pathway' ObjectSomeValueFrom('positively_regulates' 'SREBP signaling pathway')) + EquivalentClasses('positive regulation of SREBP signaling pathway' ObjectSomeValueFrom('positively_regulates' 'SREBP signaling pathway') ) + SubClassOf('positive regulation of SREBP signaling pathway' 'regulation of SREBP signaling pathway') --- !New Class!: http://www.geneontology.org/go#GO_1900461 label: positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#OMIT_0000191 label: DiffuseLargeBCellLymphoma + SubClassOf('DiffuseLargeBCellLymphoma' 'MatureBCellNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0001187 label: RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity + SubClassOf('RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase I transcriptional preinitiation complex assembly at the promoter for the nuclear large rRNA transcript')) + SubClassOf('RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity' 'RNA polymerase I transcription factor recruiting transcription factor activity') + SubClassOf('RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity' 'RNA polymerase I CORE element sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000332 label: ThoracicDuct + SubClassOf('ThoracicDuct' 'LymphaticVessels') --- !New Class!: http://www.geneontology.org/go#GO_0061403 label: positive regulation of transcription from RNA polymerase II promoter in response to nitrosative stress + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to nitrosative stress' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#OMIT_0000114 label: ExperimentalValidation + SubClassOf('ExperimentalValidation' 'biological_process') + SubClassOf('ExperimentalValidation' ObjectSomeValueFrom('experimentContainsMiRNA' 'miRNA')) + SubClassOf('ExperimentalValidation' ObjectSomeValueFrom('experimentContainsTarget' 'gene')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000099 label: EmbryonicTissue + SubClassOf('EmbryonicTissue' 'Tissue') --- !New Class!: http://www.geneontology.org/go#GO_0070124 label: mitochondrial translational initiation + SubClassOf('mitochondrial translational initiation' 'translational initiation') + SubClassOf('mitochondrial translational initiation' ObjectSomeValueFrom('part_of' 'mitochondrial translation')) + EquivalentClasses('translational initiation' 'mitochondrial translational initiation' ) --- !New Class!: http://www.geneontology.org/go#GO_0097418 label: neurofibrillary tangle + SubClassOf('neurofibrillary tangle' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_1900462 label: negative regulation of pseudohyphal growth by negative regulation of transcription from RNA polymerase II promoter + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of pseudohyphal growth by negative regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('negative regulation of pseudohyphal growth by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0000456 label: dimethylation involved in SSU-rRNA maturation + SubClassOf('dimethylation involved in SSU-rRNA maturation' ObjectSomeValueFrom('part_of' 'maturation of SSU-rRNA')) + SubClassOf('dimethylation involved in SSU-rRNA maturation' 'rRNA methylation') --- !New Class!: http://www.geneontology.org/go#GO_0039557 label: suppression by virus of host IRF7 activity + SubClassOf('suppression by virus of host IRF7 activity' 'suppression by virus of host transcription') --- !New Class!: http://www.geneontology.org/go#SO_0001205 label: SP6_RNA_Polymerase_Promoter + SubClassOf('SP6_RNA_Polymerase_Promoter' 'Phage_RNA_Polymerase_Promoter') --- !New Class!: http://www.geneontology.org/go#GO_0032784 label: regulation of DNA-dependent transcription, elongation + SubClassOf('regulation of DNA-dependent transcription, elongation' 'regulation of transcription, DNA-dependent') + EquivalentClasses('regulation of DNA-dependent transcription, elongation' ObjectSomeValueFrom('regulates' 'DNA-dependent transcription, elongation') ) + SubClassOf('regulation of DNA-dependent transcription, elongation' ObjectSomeValueFrom('regulates' 'DNA-dependent transcription, elongation')) --- !New Class!: http://www.geneontology.org/go#span_FiatProcessPart label: fiat_process_part + DisjointClasses('fiat_process_part' 'process_aggregate') + DisjointClasses('fiat_process_part' 'process_boundary') + DisjointClasses('fiat_process_part' 'process') + DisjointClasses('fiat_process_part' 'processual_context') + SubClassOf('fiat_process_part' 'processual_entity') --- !New Class!: http://www.geneontology.org/go#GO_0017055 label: negative regulation of RNA polymerase II transcriptional preinitiation complex assembly + SubClassOf('negative regulation of RNA polymerase II transcriptional preinitiation complex assembly' 'negative regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('negative regulation of RNA polymerase II transcriptional preinitiation complex assembly' ObjectSomeValueFrom('negatively_regulates' 'RNA polymerase II transcriptional preinitiation complex assembly') ) + SubClassOf('negative regulation of RNA polymerase II transcriptional preinitiation complex assembly' 'regulation of RNA polymerase II transcriptional preinitiation complex assembly') + SubClassOf('negative regulation of RNA polymerase II transcriptional preinitiation complex assembly' ObjectSomeValueFrom('negatively_regulates' 'RNA polymerase II transcriptional preinitiation complex assembly')) --- !New Class!: http://www.geneontology.org/go#GO_0006413 label: translational initiation + EquivalentClasses('translational initiation' 'mitochondrial translational initiation' ) + SubClassOf('translational initiation' ObjectSomeValueFrom('part_of' 'translation')) --- !New Class!: http://www.geneontology.org/go#GO_0070929 label: trans-translation + SubClassOf('trans-translation' 'translational elongation') --- !New Class!: http://www.geneontology.org/go#GO_0006378 label: mRNA polyadenylation + SubClassOf('mRNA polyadenylation' 'mRNA 3'-end processing') + SubClassOf('mRNA polyadenylation' 'RNA polyadenylation') --- !New Class!: http://www.geneontology.org/go#SO_0001266 label: scRNA_gene + SubClassOf('scRNA_gene' 'ncRNA_gene') --- !New Class!: http://www.geneontology.org/go#GO_0007221 label: positive regulation of transcription of Notch receptor target + SubClassOf('positive regulation of transcription of Notch receptor target' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0019801 label: cyclization of asparagine involved in intein-mediated protein splicing + SubClassOf('cyclization of asparagine involved in intein-mediated protein splicing' ObjectSomeValueFrom('part_of' 'intein-mediated protein splicing')) --- !New Class!: http://www.geneontology.org/go#GO_0010608 label: posttranscriptional regulation of gene expression + SubClassOf('posttranscriptional regulation of gene expression' 'regulation of gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0002190 label: cap-independent translational initiation + SubClassOf('cap-independent translational initiation' 'cytoplasmic translational initiation') --- !New Class!: http://www.geneontology.org/go#GO_0035582 label: sequestering of BMP in extracellular matrix + SubClassOf('sequestering of BMP in extracellular matrix' 'negative regulation of BMP signaling pathway') --- !New Class!: http://www.geneontology.org/go#GO_0060796 label: regulation of transcription involved in primary germ layer cell fate commitment + SubClassOf('regulation of transcription involved in primary germ layer cell fate commitment' 'regulation of transcription involved in cell fate commitment') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in primary germ layer cell fate commitment' ) --- !New Class!: http://www.geneontology.org/go#GO_0034477 label: U6 snRNA 3'-end processing + SubClassOf('U6 snRNA 3'-end processing' 'snRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#SO_0000298 label: recombination_feature + SubClassOf('recombination_feature' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0001109 label: promoter clearance during DNA-dependent transcription + SubClassOf('promoter clearance during DNA-dependent transcription' ObjectSomeValueFrom('part_of' 'transcription, DNA-dependent')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000357 label: Uterus + SubClassOf('Uterus' 'FemaleReproductiveSystem') --- !New Class!: http://www.geneontology.org/go#GO_0006364 label: rRNA processing + EquivalentClasses('rRNA processing' 'chloroplast rRNA processing' ) + SubClassOf('rRNA processing' 'ncRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0035087 label: siRNA loading onto RISC involved in RNA interference + SubClassOf('siRNA loading onto RISC involved in RNA interference' 'small RNA loading onto RISC') + SubClassOf('siRNA loading onto RISC involved in RNA interference' ObjectSomeValueFrom('part_of' 'RNA interference')) --- !New Class!: http://www.geneontology.org/go#GO_0045014 label: negative regulation of transcription by glucose + SubClassOf('negative regulation of transcription by glucose' 'carbon catabolite repression of transcription') + SubClassOf('negative regulation of transcription by glucose' 'regulation of transcription by glucose') --- !New Class!: http://www.geneontology.org/go#GO_0034476 label: U5 snRNA 3'-end processing + SubClassOf('U5 snRNA 3'-end processing' 'snRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#GO_0035960 label: regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) + SubClassOf('regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#OMIT_0000057 label: NerveTissueCell + SubClassOf('NerveTissueCell' 'cell') --- !New Class!: http://www.geneontology.org/go#span_TemporalInstant label: temporal_instant + SubClassOf('temporal_instant' 'connected_temporal_region') + DisjointClasses('temporal_instant' 'temporal_interval') --- !New Class!: http://www.geneontology.org/go#GO_0085032 label: modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade + SubClassOf('modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade' 'regulation of I-kappaB kinase/NF-kappaB cascade') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_9526 label: Catarrhini + SubClassOf('Catarrhini' 'Simiiformes') --- !New Class!: http://www.geneontology.org/go#GO_0070147 label: mitochondrial cysteinyl-tRNA aminoacylation + EquivalentClasses('cysteinyl-tRNA aminoacylation' 'mitochondrial cysteinyl-tRNA aminoacylation' ) + SubClassOf('mitochondrial cysteinyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') + SubClassOf('mitochondrial cysteinyl-tRNA aminoacylation' 'cysteinyl-tRNA aminoacylation') --- !New Class!: http://www.geneontology.org/go#GO_0060568 label: regulation of peptide hormone processing + SubClassOf('regulation of peptide hormone processing' ObjectSomeValueFrom('regulates' 'peptide hormone processing')) + SubClassOf('regulation of peptide hormone processing' 'regulation of protein processing') + EquivalentClasses('regulation of peptide hormone processing' ObjectSomeValueFrom('regulates' 'peptide hormone processing') ) --- !New Class!: http://www.geneontology.org/go#GO_0003269 label: BMP signaling pathway involved in regulation of secondary heart field cardioblast proliferation + SubClassOf('BMP signaling pathway involved in regulation of secondary heart field cardioblast proliferation' 'BMP signaling pathway involved in heart development') + EquivalentClasses('BMP signaling pathway involved in regulation of secondary heart field cardioblast proliferation' 'BMP signaling pathway involved in heart development' ) --- !New Class!: http://www.geneontology.org/go#SO_0001637 label: rRNA_gene + SubClassOf('rRNA_gene' 'ncRNA_gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000294 label: InferiorVenaCava + SubClassOf('InferiorVenaCava' 'VenaCava') --- !New Class!: http://www.geneontology.org/go#GO_0002542 label: Factor XII activation + SubClassOf('Factor XII activation' 'positive regulation of protein processing') + SubClassOf('Factor XII activation' ObjectSomeValueFrom('positively_regulates' 'activation of plasma proteins involved in acute inflammatory response')) --- !New Class!: http://www.geneontology.org/go#GO_0033451 label: GUA codon-amino acid adaptor activity + SubClassOf('GUA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_1901294 label: negative regulation of SREBP signaling pathway by negative regulation of DNA binding + EquivalentClasses('negative regulation of SREBP signaling pathway by negative regulation of DNA binding' ObjectSomeValueFrom('results_in' 'negative regulation of SREBP signaling pathway') ) + SubClassOf('negative regulation of SREBP signaling pathway by negative regulation of DNA binding' 'negative regulation of SREBP signaling pathway') --- !New Class!: http://www.geneontology.org/go#GO_0070852 label: cell body fiber + SubClassOf('cell body fiber' 'neuron projection') --- !New Class!: http://www.geneontology.org/go#SO_0000377 label: CsrB_RsmB_RNA + SubClassOf('CsrB_RsmB_RNA' 'small_regulatory_ncRNA') --- !New Class!: http://www.geneontology.org/go#GO_0000388 label: spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) + SubClassOf('spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)' ObjectSomeValueFrom('part_of' 'spliceosomal conformational changes to generate catalytic conformation')) --- !New Class!: http://www.geneontology.org/go#GO_0060817 label: inactivation of paternal X chromosome + SubClassOf('inactivation of paternal X chromosome' 'dosage compensation by inactivation of X chromosome') --- !New Class!: http://www.geneontology.org/go#GO_0046773 label: suppression by virus of host termination of protein biosynthetic process + SubClassOf('suppression by virus of host termination of protein biosynthetic process' 'negative regulation of translational termination') --- !New Class!: http://www.geneontology.org/go#SO_0001747 label: open_chromatin_region + SubClassOf('open_chromatin_region' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0071683 label: sensory dendrite + SubClassOf('sensory dendrite' 'dendrite') --- !New Class!: http://www.geneontology.org/go#OMIT_0000188 label: PrecursorBCellAcuteLymphoblasticLeukemiaLymphoma + SubClassOf('PrecursorBCellAcuteLymphoblasticLeukemiaLymphoma' 'ImmatureBOrTCellNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0097239 label: positive regulation of transcription from RNA polymerase II promoter in response to methylglyoxal + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to methylglyoxal' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#OMIT_0000101 label: EpithelialTissue + SubClassOf('EpithelialTissue' 'AdultTissue') --- !New Class!: http://www.geneontology.org/go#GO_0046020 label: negative regulation of transcription from RNA polymerase II promoter by pheromones + SubClassOf('negative regulation of transcription from RNA polymerase II promoter by pheromones' 'regulation of transcription from RNA polymerase II promoter by pheromones') + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter by pheromones' 'positive regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones' ) + SubClassOf('negative regulation of transcription from RNA polymerase II promoter by pheromones' 'negative regulation of transcription by pheromones') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter by pheromones' 'negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0007252 label: I-kappaB phosphorylation + SubClassOf('I-kappaB phosphorylation' ObjectSomeValueFrom('part_of' 'I-kappaB kinase/NF-kappaB cascade')) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_207598 label: Homininae + SubClassOf('Homininae' 'Hominidae') --- !New Class!: http://www.geneontology.org/go#GO_0070145 label: mitochondrial asparaginyl-tRNA aminoacylation + SubClassOf('mitochondrial asparaginyl-tRNA aminoacylation' 'asparaginyl-tRNA aminoacylation') + SubClassOf('mitochondrial asparaginyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') + EquivalentClasses('asparaginyl-tRNA aminoacylation' 'mitochondrial asparaginyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0001022 label: transcription initiation from RNA polymerase III type 1 promoter + SubClassOf('transcription initiation from RNA polymerase III type 1 promoter' 'transcription initiation from RNA polymerase III promoter') + SubClassOf('transcription initiation from RNA polymerase III type 1 promoter' ObjectSomeValueFrom('part_of' '5S class rRNA transcription from RNA polymerase III type 1 promoter')) --- !New Class!: http://www.geneontology.org/go#SO_0000001 label: region + SubClassOf('region' 'sequence_feature') --- !New Class!: http://www.geneontology.org/go#GO_0008434 label: calcitriol receptor activity + SubClassOf('calcitriol receptor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_1901244 label: positive regulation of transcription from RNA polymerase II promoter involved in defense response to fungus + SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in defense response to fungus' 'positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in defense response to fungus' ) --- !New Class!: http://www.geneontology.org/go#GO_1900096 label: negative regulation of dosage compensation by inactivation of X chromosome + SubClassOf('negative regulation of dosage compensation by inactivation of X chromosome' 'regulation of dosage compensation by inactivation of X chromosome') + SubClassOf('negative regulation of dosage compensation by inactivation of X chromosome' ObjectSomeValueFrom('negatively_regulates' 'dosage compensation by inactivation of X chromosome')) + EquivalentClasses('negative regulation of dosage compensation by inactivation of X chromosome' ObjectSomeValueFrom('negatively_regulates' 'dosage compensation by inactivation of X chromosome') ) --- !New Class!: http://www.geneontology.org/go#GO_0090472 label: dibasic protein processing + SubClassOf('dibasic protein processing' 'protein processing') --- !New Class!: http://www.geneontology.org/go#GO_0002103 label: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) + SubClassOf('endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)' 'endonucleolytic cleavage involved in rRNA processing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000372 label: NasalCavity + SubClassOf('NasalCavity' 'UpperRespiratoryTract') --- !New Class!: http://www.geneontology.org/go#GO_0030969 label: UFP-specific transcription factor mRNA processing involved in endoplasmic reticulum unfolded protein response + SubClassOf('UFP-specific transcription factor mRNA processing involved in endoplasmic reticulum unfolded protein response' 'mRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0045993 label: negative regulation of translational initiation by iron + SubClassOf('negative regulation of translational initiation by iron' 'regulation of translational initiation by iron') + SubClassOf('negative regulation of translational initiation by iron' 'negative regulation of translational initiation') --- !New Class!: http://www.geneontology.org/go#GO_0035951 label: positive regulation of oligopeptide transport by positive regulation of transcription from RNA polymerase II promoter + EquivalentClasses('positive regulation of oligopeptide transport by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) + SubClassOf('positive regulation of oligopeptide transport by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of oligopeptide transport by positive regulation of transcription from RNA polymerase II promoter' 'regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0002104 label: endonucleolytic cleaveage between 4.5S rRNA and 5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) + SubClassOf('endonucleolytic cleaveage between 4.5S rRNA and 5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)' 'endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)') --- !New Class!: http://www.geneontology.org/go#GO_0072365 label: regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase II promoter') ) + SubClassOf('regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter') + SubClassOf('regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0030909 label: non-intein-mediated protein splicing + SubClassOf('non-intein-mediated protein splicing' 'protein splicing') --- !New Class!: http://www.geneontology.org/go#MOD_00033 label: crosslinked residues + SubClassOf('crosslinked residues' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_0051039 label: positive regulation of transcription during meiosis + SubClassOf('positive regulation of transcription during meiosis' 'positive regulation of transcription, DNA-dependent') + SubClassOf('positive regulation of transcription during meiosis' 'regulation of transcription during meiosis') --- !New Class!: http://www.geneontology.org/go#GO_0042794 label: rRNA transcription from plastid promoter + SubClassOf('rRNA transcription from plastid promoter' 'rRNA transcription') + SubClassOf('rRNA transcription from plastid promoter' 'transcription from plastid promoter') --- !New Class!: http://www.geneontology.org/go#GO_0033217 label: regulation of transcription from RNA polymerase II promoter in response to iron ion starvation + SubClassOf('regulation of transcription from RNA polymerase II promoter in response to iron ion starvation' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0035194 label: posttranscriptional gene silencing by RNA + SubClassOf('posttranscriptional gene silencing by RNA' 'gene silencing by RNA') + SubClassOf('posttranscriptional gene silencing by RNA' 'posttranscriptional gene silencing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000255 label: UrinaryOrgan + SubClassOf('UrinaryOrgan' 'AnatomicFeature') --- !New Class!: http://www.geneontology.org/go#GO_0002331 label: pre-B cell allelic exclusion + SubClassOf('pre-B cell allelic exclusion' 'regulation of gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0044543 label: envenomation resulting in zymogen activation in other organism + SubClassOf('envenomation resulting in zymogen activation in other organism' ObjectSomeValueFrom('has_part' 'zymogen activation in other organism')) --- !New Class!: http://www.geneontology.org/go#GO_0044529 label: regulation of mitochondrial rRNA stability + SubClassOf('regulation of mitochondrial rRNA stability' 'regulation of rRNA stability') --- !New Class!: http://www.geneontology.org/go#GO_0001969 label: regulation of activation of membrane attack complex + SubClassOf('regulation of activation of membrane attack complex' 'regulation of complement activation') --- !New Class!: http://www.geneontology.org/go#GO_0038175 label: negative regulation of SREBP signaling pathway in response to increased oxygen levels + SubClassOf('negative regulation of SREBP signaling pathway in response to increased oxygen levels' 'negative regulation of SREBP signaling pathway') --- !New Class!: http://www.geneontology.org/go#SO_0000097 label: nucleomorph_gene + SubClassOf('nucleomorph_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_117569 label: Hyperoartia + SubClassOf('Hyperoartia' 'Vertebrata') --- !New Class!: http://www.geneontology.org/go#GO_0017148 label: negative regulation of translation + EquivalentClasses('negative regulation of translation' 'negative regulation of translation involved in response to endoplasmic reticulum stress' ) + SubClassOf('negative regulation of translation' ObjectSomeValueFrom('negatively_regulates' 'translation')) + SubClassOf('negative regulation of translation' 'regulation of translation') + EquivalentClasses('negative regulation of translation' ObjectSomeValueFrom('negatively_regulates' 'translation') ) --- !New Class!: http://www.geneontology.org/go#GO_0044544 label: envenomation resulting in plasminogen activation in other organism + SubClassOf('envenomation resulting in plasminogen activation in other organism' ObjectSomeValueFrom('has_part' 'plasminogen activation in other organism')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000224 label: PrimaryCardiacSarcoma + SubClassOf('PrimaryCardiacSarcoma' 'Sarcoma') --- !New Class!: http://www.geneontology.org/go#GO_0009047 label: dosage compensation by hyperactivation of X chromosome + SubClassOf('dosage compensation by hyperactivation of X chromosome' 'dosage compensation') --- !New Class!: http://www.geneontology.org/go#GO_0070133 label: negative regulation of mitochondrial translational initiation + EquivalentClasses('negative regulation of mitochondrial translational initiation' ObjectSomeValueFrom('negatively_regulates' 'mitochondrial translational initiation') ) + SubClassOf('negative regulation of mitochondrial translational initiation' ObjectSomeValueFrom('negatively_regulates' 'mitochondrial translational initiation')) + SubClassOf('negative regulation of mitochondrial translational initiation' 'regulation of mitochondrial translational initiation') + SubClassOf('negative regulation of mitochondrial translational initiation' 'negative regulation of translational initiation') --- !New Class!: http://www.geneontology.org/go#GO_0010599 label: production of lsiRNA involved in RNA interference + SubClassOf('production of lsiRNA involved in RNA interference' ObjectSomeValueFrom('part_of' 'RNA interference')) + SubClassOf('production of lsiRNA involved in RNA interference' 'production of small RNA involved in gene silencing by RNA') --- !New Class!: http://www.geneontology.org/go#OMIT_0000165 label: SplenicHemangioma + SubClassOf('SplenicHemangioma' 'EpithelialOrigin') --- !New Class!: http://www.geneontology.org/go#GO_0001023 label: transcription initiation from RNA polymerase III type 2 promoter + SubClassOf('transcription initiation from RNA polymerase III type 2 promoter' 'transcription initiation from RNA polymerase III promoter') + SubClassOf('transcription initiation from RNA polymerase III type 2 promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III type 2 promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0001066 label: plastid single subunit type RNA polymerase activity + SubClassOf('plastid single subunit type RNA polymerase activity' ObjectSomeValueFrom('part_of' 'transcription from plastid promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0000374 label: Group III intron splicing + SubClassOf('Group III intron splicing' 'RNA splicing, via transesterification reactions with bulged adenosine as nucleophile') --- !New Class!: http://www.geneontology.org/go#OMIT_0000180 label: ImmatureBOrTCellNeoplasm + SubClassOf('ImmatureBOrTCellNeoplasm' 'LymphoidNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_1901644 label: positive regulation of tRNA methylation in response to nitrogen starvation + SubClassOf('positive regulation of tRNA methylation in response to nitrogen starvation' ObjectSomeValueFrom('positively_regulates' 'tRNA methylation in response to nitrogen starvation')) + SubClassOf('positive regulation of tRNA methylation in response to nitrogen starvation' 'regulation of tRNA methylation in response to nitrogen starvation') + SubClassOf('positive regulation of tRNA methylation in response to nitrogen starvation' 'positive regulation of tRNA processing') + EquivalentClasses('positive regulation of tRNA methylation in response to nitrogen starvation' ObjectSomeValueFrom('positively_regulates' 'tRNA methylation in response to nitrogen starvation') ) --- !New Class!: http://www.geneontology.org/go#GO_0034964 label: box H/ACA snoRNA processing + SubClassOf('box H/ACA snoRNA processing' 'snoRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0010892 label: positive regulation of mitochondrial translation in response to stress + SubClassOf('positive regulation of mitochondrial translation in response to stress' 'positive regulation of mitochondrial translation') + SubClassOf('positive regulation of mitochondrial translation in response to stress' 'positive regulation of translation in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0001086 label: TFIIA-class binding transcription factor activity + SubClassOf('TFIIA-class binding transcription factor activity' 'RNA polymerase II basal transcription factor binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_1001604 label: Nucleariidae and Fonticula group + SubClassOf('Nucleariidae and Fonticula group' 'Opisthokonta') --- !New Class!: http://www.geneontology.org/go#GO_0035597 label: N6-isopentenyladenosine methylthiotransferase activity + SubClassOf('N6-isopentenyladenosine methylthiotransferase activity' ObjectSomeValueFrom('part_of' 'tRNA methylthiolation')) --- !New Class!: http://www.geneontology.org/go#GO_0001971 label: negative regulation of activation of membrane attack complex + SubClassOf('negative regulation of activation of membrane attack complex' 'negative regulation of complement activation') + SubClassOf('negative regulation of activation of membrane attack complex' 'regulation of activation of membrane attack complex') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_9443 label: Primates + SubClassOf('Primates' 'Euarchontoglires') --- !New Class!: http://www.geneontology.org/go#GO_0071586 label: CAAX-box protein processing + SubClassOf('CAAX-box protein processing' 'protein processing') + SubClassOf('CAAX-box protein processing' ObjectSomeValueFrom('part_of' 'CAAX-box protein maturation')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000309 label: Stomach + SubClassOf('Stomach' 'DigestiveOrgan') --- !New Class!: http://www.geneontology.org/go#GO_1901580 label: regulation of telomeric RNA transcription from RNA pol II promoter + SubClassOf('regulation of telomeric RNA transcription from RNA pol II promoter' ObjectSomeValueFrom('regulates' 'telomeric RNA transcription from RNA pol II promoter')) + EquivalentClasses('regulation of telomeric RNA transcription from RNA pol II promoter' ObjectSomeValueFrom('regulates' 'telomeric RNA transcription from RNA pol II promoter') ) + SubClassOf('regulation of telomeric RNA transcription from RNA pol II promoter' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0036091 label: positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress' 'regulation of transcription from RNA polymerase II promoter in response to oxidative stress') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#span_SpatiotemporalRegion label: spatiotemporal_region + SubClassOf('spatiotemporal_region' 'occurrent') + DisjointClasses('spatiotemporal_region' 'temporal_region') + DisjointClasses('processual_entity' 'spatiotemporal_region') + EquivalentClasses('spatiotemporal_region' ObjectUnionOf('connected_spatiotemporal_region' 'scattered_spatiotemporal_region') ) --- !New Class!: http://www.geneontology.org/go#GO_0000434 label: negative regulation of transcription from RNA polymerase II promoter by galactose + SubClassOf('negative regulation of transcription from RNA polymerase II promoter by galactose' 'carbon catabolite repression of transcription from RNA polymerase II promoter') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter by galactose' 'regulation of transcription from RNA polymerase II promoter by galactose') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter by galactose' 'negative regulation of transcription by galactose') --- !New Class!: http://www.geneontology.org/go#OMIT_0000245 label: CardiovascularFeature + SubClassOf('CardiovascularFeature' 'AnatomicFeature') --- !New Class!: http://www.geneontology.org/go#GO_0001196 label: regulation of mating-type specific transcription from RNA polymerase II promoter + SubClassOf('regulation of mating-type specific transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') + SubClassOf('regulation of mating-type specific transcription from RNA polymerase II promoter' 'regulation of mating-type specific transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#SO_0000363 label: floxed_gene + SubClassOf('floxed_gene' 'transgene') --- !New Class!: http://www.geneontology.org/go#GO_0036206 label: regulation of histone gene expression + SubClassOf('regulation of histone gene expression' 'regulation of gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0000991 label: core RNA polymerase II binding transcription factor activity + SubClassOf('core RNA polymerase II binding transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0042622 label: photoreceptor outer segment membrane + SubClassOf('photoreceptor outer segment membrane' 'neuron part') + SubClassOf('photoreceptor outer segment membrane' ObjectSomeValueFrom('part_of' 'photoreceptor outer segment')) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_6157 label: Platyhelminthes + SubClassOf('Platyhelminthes' 'Bilateria') --- !New Class!: http://www.geneontology.org/go#OMIT_0000040 label: HarmfulRole + SubClassOf('HarmfulRole' 'role') + SubClassOf('HarmfulRole' ObjectSomeValueFrom('causes' 'Disease')) --- !New Class!: http://www.geneontology.org/go#SO_0000087 label: nuclear_gene + SubClassOf('nuclear_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0001105 label: RNA polymerase II transcription coactivator activity + SubClassOf('RNA polymerase II transcription coactivator activity' 'RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription') + SubClassOf('RNA polymerase II transcription coactivator activity' 'RNA polymerase II transcription cofactor activity') + SubClassOf('RNA polymerase II transcription coactivator activity' ObjectSomeValueFrom('part_of' 'positive regulation of transcription from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000072 label: Eosinophils + SubClassOf('Eosinophils' 'Granulocyte') --- !New Class!: http://www.geneontology.org/go#GO_0097445 label: presynaptic active zone dense projection + SubClassOf('presynaptic active zone dense projection' ObjectSomeValueFrom('part_of' 'presynaptic active zone')) + SubClassOf('presynaptic active zone dense projection' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0097462 label: Lewy neurite + SubClassOf('Lewy neurite' 'neuron projection') --- !New Class!: http://www.geneontology.org/go#GO_0070043 label: rRNA (guanine-N7-)-methyltransferase activity + SubClassOf('rRNA (guanine-N7-)-methyltransferase activity' 'rRNA (guanine) methyltransferase activity') + SubClassOf('rRNA (guanine-N7-)-methyltransferase activity' ObjectSomeValueFrom('part_of' 'rRNA (guanine-N7)-methylation')) --- !New Class!: http://www.geneontology.org/go#GO_0070923 label: siRNA loading onto RISC involved in chromatin silencing by small RNA + SubClassOf('siRNA loading onto RISC involved in chromatin silencing by small RNA' ObjectSomeValueFrom('part_of' 'chromatin silencing by small RNA')) + SubClassOf('siRNA loading onto RISC involved in chromatin silencing by small RNA' 'small RNA loading onto RISC') --- !New Class!: http://www.geneontology.org/go#SO_0001272 label: tRNA_gene + SubClassOf('tRNA_gene' 'ncRNA_gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000344 label: VentriclesOfBrain + SubClassOf('VentriclesOfBrain' 'Brain') --- !New Class!: http://www.geneontology.org/go#GO_0006398 label: histone mRNA 3'-end processing + SubClassOf('histone mRNA 3'-end processing' 'mRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#GO_1900474 label: negative regulation of mating type switching by negative regulation of transcription from RNA polymerase II promoter + SubClassOf('negative regulation of mating type switching by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of mating type switching by negative regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0000484 label: cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) + SubClassOf('cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)')) + SubClassOf('cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)') + SubClassOf('cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)')) --- !New Class!: http://www.geneontology.org/go#GO_0035953 label: regulation of dipeptide transport by regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of dipeptide transport by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) + SubClassOf('regulation of dipeptide transport by regulation of transcription from RNA polymerase II promoter' 'regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0061429 label: positive regulation of transcription from RNA polymerase II promoter by oleic acid + SubClassOf('positive regulation of transcription from RNA polymerase II promoter by oleic acid' 'carbon catabolite activation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter by oleic acid' 'positive regulation of transcription by oleic acid') --- !New Class!: http://www.geneontology.org/go#GO_0000486 label: cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) + SubClassOf('cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)') + SubClassOf('cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)')) + SubClassOf('cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 2S rRNA')) --- !New Class!: http://www.geneontology.org/go#GO_0006342 label: chromatin silencing + SubClassOf('chromatin silencing' 'negative regulation of transcription, DNA-dependent') + SubClassOf('chromatin silencing' 'gene silencing') + SubClassOf('chromatin silencing' 'negative regulation of gene expression, epigenetic') --- !New Class!: http://www.geneontology.org/go#GO_0001083 label: RNA polymerase II basal transcription factor binding transcription factor activity + SubClassOf('RNA polymerase II basal transcription factor binding transcription factor activity' 'RNA polymerase II transcription factor binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0006615 label: SRP-dependent cotranslational protein targeting to membrane, docking + SubClassOf('SRP-dependent cotranslational protein targeting to membrane, docking' ObjectSomeValueFrom('part_of' 'SRP-dependent cotranslational protein targeting to membrane')) --- !New Class!: http://www.geneontology.org/go#GO_0035958 label: regulation of glyoxylate cycle by regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of glyoxylate cycle by regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of glyoxylate cycle by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_0061435 label: positive regulation of transcription from a mobile element promoter + SubClassOf('positive regulation of transcription from a mobile element promoter' 'positive regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0002003 label: angiotensin maturation + SubClassOf('angiotensin maturation' 'peptide hormone processing') --- !New Class!: http://www.geneontology.org/go#GO_0010768 label: negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage + SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage' 'regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage' 'negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0061414 label: positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source + SubClassOf('positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source' 'carbon catabolite activation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source' 'regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source') --- !New Class!: http://www.geneontology.org/go#GO_0038061 label: NIK/NF-kappaB cascade + SubClassOf('NIK/NF-kappaB cascade' ObjectSomeValueFrom('has_part' 'positive regulation of NF-kappaB transcription factor activity')) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_33208 label: Metazoa + SubClassOf('Metazoa' 'Opisthokonta') --- !New Class!: http://www.geneontology.org/go#OMIT_0000225 label: PharmaceuticalTreatment + SubClassOf('PharmaceuticalTreatment' 'Treatment') --- !New Class!: http://www.geneontology.org/go#GO_1900374 label: positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0061428 label: negative regulation of transcription from RNA polymerase II promoter in response to hypoxia + SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to hypoxia' 'negative regulation of transcription from RNA polymerase II promoter in response to stress') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to hypoxia' 'regulation of transcription from RNA polymerase II promoter in response to hypoxia') --- !New Class!: http://www.geneontology.org/go#GO_0070151 label: mitochondrial histidyl-tRNA aminoacylation + SubClassOf('mitochondrial histidyl-tRNA aminoacylation' 'histidyl-tRNA aminoacylation') + SubClassOf('mitochondrial histidyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') + EquivalentClasses('histidyl-tRNA aminoacylation' 'mitochondrial histidyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0043025 label: neuronal cell body + SubClassOf('neuronal cell body' 'neuron part') --- !New Class!: http://www.geneontology.org/go#OMIT_0000097 label: Tissue + SubClassOf('Tissue' 'object_aggregate') --- !New Class!: http://www.geneontology.org/go#GO_0003303 label: BMP signaling pathway involved in heart jogging + SubClassOf('BMP signaling pathway involved in heart jogging' 'BMP signaling pathway involved in determination of left/right symmetry') + SubClassOf('BMP signaling pathway involved in heart jogging' 'BMP signaling pathway involved in heart development') + EquivalentClasses('BMP signaling pathway involved in heart jogging' 'BMP signaling pathway' ) --- !New Class!: http://www.geneontology.org/go#GO_0061177 label: type Is terminal bouton + SubClassOf('type Is terminal bouton' 'type I terminal bouton') --- !New Class!: http://www.geneontology.org/go#OMIT_0000339 label: SpinalCord + SubClassOf('SpinalCord' 'CentralNervousSystem') --- !New Class!: http://www.geneontology.org/go#MOD_00394 label: acetylated residue + SubClassOf('acetylated residue' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_0043005 label: neuron projection + SubClassOf('neuron projection' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_1900410 label: regulation of histone modification by regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of histone modification by regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('regulation of histone modification by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_1901311 label: regulation of gene expression involved in extracellular matrix organization + SubClassOf('regulation of gene expression involved in extracellular matrix organization' ObjectSomeValueFrom('regulates' 'gene expression involved in extracellular matrix organization')) + EquivalentClasses('regulation of gene expression involved in extracellular matrix organization' ObjectSomeValueFrom('regulates' 'gene expression involved in extracellular matrix organization') ) + SubClassOf('regulation of gene expression involved in extracellular matrix organization' 'regulation of gene expression') --- !New Class!: http://www.geneontology.org/go#OMIT_0000167 label: Thymoma + SubClassOf('Thymoma' 'EpithelialOrigin') --- !New Class!: http://www.geneontology.org/go#GO_0090019 label: regulation of transcription involved in anterior neural plate formation + SubClassOf('regulation of transcription involved in anterior neural plate formation' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription involved in anterior neural plate formation' ) --- !New Class!: http://www.geneontology.org/go#snap_Site label: site + DisjointClasses('object_aggregate' 'site') + DisjointClasses('object_boundary' 'site') + DisjointClasses('object' 'site') + DisjointClasses('material_entity' 'site') + SubClassOf('site' 'independent_continuant') + DisjointClasses('fiat_object_part' 'site') --- !New Class!: http://www.geneontology.org/go#GO_0060566 label: positive regulation of DNA-dependent transcription, termination + EquivalentClasses('positive regulation of DNA-dependent transcription, termination' ObjectSomeValueFrom('positively_regulates' 'DNA-dependent transcription, termination') ) + SubClassOf('positive regulation of DNA-dependent transcription, termination' 'positive regulation of transcription, DNA-dependent') + SubClassOf('positive regulation of DNA-dependent transcription, termination' ObjectSomeValueFrom('positively_regulates' 'DNA-dependent transcription, termination')) + SubClassOf('positive regulation of DNA-dependent transcription, termination' 'regulation of DNA-dependent transcription, termination') --- !New Class!: http://www.geneontology.org/go#GO_0044634 label: negative regulation of complement activation, alternative pathway in other organism + SubClassOf('negative regulation of complement activation, alternative pathway in other organism' 'modulation of complement activation, alternative pathway in other organism') + SubClassOf('negative regulation of complement activation, alternative pathway in other organism' 'negative regulation of complement activation, alternative pathway') --- !New Class!: http://www.geneontology.org/go#GO_0034246 label: mitochondrial RNA polymerase binding promoter specificity activity + SubClassOf('mitochondrial RNA polymerase binding promoter specificity activity' ObjectSomeValueFrom('part_of' 'transcription initiation from mitochondrial promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0034470 label: ncRNA processing + SubClassOf('ncRNA processing' 'RNA processing') --- !New Class!: http://www.geneontology.org/go#GO_1901921 label: phosphorylation of RNA polymerase II C-terminal domain involved in recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex + EquivalentClasses('phosphorylation of RNA polymerase II C-terminal domain involved in recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex' ObjectIntersectionOf('phosphorylation of RNA polymerase II C-terminal domain' ObjectSomeValueFrom('part_of' 'recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex')) ) + SubClassOf('phosphorylation of RNA polymerase II C-terminal domain involved in recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex' 'phosphorylation of RNA polymerase II C-terminal domain') + SubClassOf('phosphorylation of RNA polymerase II C-terminal domain involved in recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex' ObjectSomeValueFrom('part_of' 'recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000161 label: SplenicFibroma + SubClassOf('SplenicFibroma' 'ConnectiveOrigin') --- !New Class!: http://www.geneontology.org/go#GO_0033456 label: GCG codon-amino acid adaptor activity + SubClassOf('GCG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0071051 label: polyadenylation-dependent snoRNA 3'-end processing + SubClassOf('polyadenylation-dependent snoRNA 3'-end processing' 'snoRNA 3'-end processing') + SubClassOf('polyadenylation-dependent snoRNA 3'-end processing' ObjectSomeValueFrom('has_part' 'snoRNA polyadenylation')) --- !New Class!: http://www.geneontology.org/go#GO_0071031 label: nuclear mRNA surveillance of mRNA 3'-end processing + SubClassOf('nuclear mRNA surveillance of mRNA 3'-end processing' ObjectSomeValueFrom('has_part' 'nuclear polyadenylation-dependent mRNA catabolic process')) --- !New Class!: http://www.geneontology.org/go#GO_0097444 label: spine apparatus + SubClassOf('spine apparatus' ObjectSomeValueFrom('part_of' 'neuron spine')) + SubClassOf('spine apparatus' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_2000633 label: positive regulation of pre-miRNA processing + SubClassOf('positive regulation of pre-miRNA processing' ObjectSomeValueFrom('positively_regulates' 'pre-miRNA processing')) + SubClassOf('positive regulation of pre-miRNA processing' 'regulation of pre-miRNA processing') + EquivalentClasses('positive regulation of pre-miRNA processing' ObjectSomeValueFrom('positively_regulates' 'pre-miRNA processing') ) --- !New Class!: http://www.geneontology.org/go#GO_0016246 label: RNA interference + SubClassOf('RNA interference' 'posttranscriptional gene silencing by RNA') --- !New Class!: http://www.geneontology.org/go#GO_0097413 label: Lewy body + SubClassOf('Lewy body' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0097167 label: circadian regulation of translation + SubClassOf('circadian regulation of translation' 'regulation of translation') --- !New Class!: http://www.geneontology.org/go#OMIT_0000313 label: Pancreas + SubClassOf('Pancreas' 'EndocrineOrgan') --- !New Class!: http://www.geneontology.org/go#OMIT_0000100 label: ConnectiveTissue + SubClassOf('ConnectiveTissue' 'AdultTissue') --- !New Class!: http://www.geneontology.org/go#GO_0010620 label: negative regulation of transcription by transcription factor catabolism + SubClassOf('negative regulation of transcription by transcription factor catabolism' 'negative regulation of transcription, DNA-dependent') + EquivalentClasses('negative regulation of transcription by transcription factor catabolism' ObjectSomeValueFrom('results_in' 'negative regulation of transcription, DNA-dependent') ) --- !New Class!: http://www.geneontology.org/go#GO_0035949 label: positive regulation of gluconeogenesis by negative regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of gluconeogenesis by negative regulation of transcription from RNA polymerase II promoter' 'regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of gluconeogenesis by negative regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of gluconeogenesis by negative regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase II promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_0061392 label: regulation of transcription from RNA polymerase II promoter in response to osmotic stress + SubClassOf('regulation of transcription from RNA polymerase II promoter in response to osmotic stress' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0002196 label: Ser-tRNA(Ala) hydrolase activity + SubClassOf('Ser-tRNA(Ala) hydrolase activity' 'aminoacyl-tRNA editing activity') --- !New Class!: http://www.geneontology.org/go#GO_0033427 label: CAA codon-amino acid adaptor activity + SubClassOf('CAA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#SO_0001219 label: retrogene + SubClassOf('retrogene' 'gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000131 label: ChomosomalDisorder + SubClassOf('ChomosomalDisorder' 'GeneticDisease') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_376913 label: Haplorrhini + SubClassOf('Haplorrhini' 'Primates') --- !New Class!: http://www.geneontology.org/go#GO_0060969 label: negative regulation of gene silencing + SubClassOf('negative regulation of gene silencing' ObjectSomeValueFrom('negatively_regulates' 'gene silencing')) + EquivalentClasses('negative regulation of gene silencing' ObjectSomeValueFrom('negatively_regulates' 'gene silencing') ) + SubClassOf('negative regulation of gene silencing' 'regulation of gene silencing') --- !New Class!: http://www.geneontology.org/go#GO_0060968 label: regulation of gene silencing + EquivalentClasses('regulation of gene silencing' ObjectSomeValueFrom('regulates' 'gene silencing') ) + SubClassOf('regulation of gene silencing' ObjectSomeValueFrom('regulates' 'gene silencing')) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_110814 label: Xenoturbellida + SubClassOf('Xenoturbellida' 'Deuterostomia') --- !New Class!: http://www.geneontology.org/go#GO_0043766 label: Sep-tRNA:Cys-tRNA synthase activity + SubClassOf('Sep-tRNA:Cys-tRNA synthase activity' ObjectSomeValueFrom('part_of' 'conversion of O-phosphoseryl-tRNA to cysteinyl-tRNA')) --- !New Class!: http://www.geneontology.org/go#GO_0061398 label: negative regulation of transcription from RNA polymerase II promoter in response to copper ion + SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to copper ion' 'negative regulation of transcription from RNA polymerase II promoter') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to copper ion' 'regulation of transcription from RNA polymerase II promoter in response to copper ion') --- !New Class!: http://www.geneontology.org/go#SO_0001638 label: piRNA_gene + SubClassOf('piRNA_gene' 'ncRNA_gene') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_7735 label: Cephalochordata + SubClassOf('Cephalochordata' 'Chordata') --- !New Class!: http://www.geneontology.org/go#GO_0001137 label: TFIIF-class transcription factor recruiting transcription factor activity + SubClassOf('TFIIF-class transcription factor recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase II transcriptional preinitiation complex assembly')) + SubClassOf('TFIIF-class transcription factor recruiting transcription factor activity' 'RNA polymerase II transcription factor recruiting transcription factor activity') + SubClassOf('TFIIF-class transcription factor recruiting transcription factor activity' 'TFIIF-class binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000098 label: AdultTissue + SubClassOf('AdultTissue' 'Tissue') --- !New Class!: http://www.geneontology.org/go#GO_0043145 label: snoRNA 3'-end cleavage + SubClassOf('snoRNA 3'-end cleavage' 'snoRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#GO_1900095 label: regulation of dosage compensation by inactivation of X chromosome + SubClassOf('regulation of dosage compensation by inactivation of X chromosome' ObjectSomeValueFrom('regulates' 'dosage compensation by inactivation of X chromosome')) + EquivalentClasses('regulation of dosage compensation by inactivation of X chromosome' ObjectSomeValueFrom('regulates' 'dosage compensation by inactivation of X chromosome') ) --- !New Class!: http://www.geneontology.org/go#GO_1900400 label: regulation of iron ion import by regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of iron ion import by regulation of transcription from RNA polymerase II promoter' 'regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of iron ion import by regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_2000237 label: positive regulation of tRNA processing + SubClassOf('positive regulation of tRNA processing' 'regulation of tRNA processing') + SubClassOf('positive regulation of tRNA processing' ObjectSomeValueFrom('positively_regulates' 'tRNA processing')) + EquivalentClasses('positive regulation of tRNA processing' ObjectSomeValueFrom('positively_regulates' 'tRNA processing') ) --- !New Class!: http://www.geneontology.org/go#GO_1990095 label: positive regulation of transcription from RNA polymerase II promoter in response to reactive oxygen species + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to reactive oxygen species' 'positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress') --- !New Class!: http://www.geneontology.org/go#GO_0008152 label: metabolic process + SubClassOf('metabolic process' 'biological_process') --- !New Class!: http://www.geneontology.org/go#OMIT_0000052 label: Organism + SubClassOf('Organism' 'object') --- !New Class!: http://www.geneontology.org/go#GO_0061416 label: regulation of transcription from RNA polymerase II promoter in response to salt stress + SubClassOf('regulation of transcription from RNA polymerase II promoter in response to salt stress' 'regulation of transcription from RNA polymerase II promoter in response to osmotic stress') --- !New Class!: http://www.geneontology.org/go#GO_0070329 label: tRNA seleno-modification + SubClassOf('tRNA seleno-modification' 'tRNA modification') --- !New Class!: http://www.geneontology.org/go#SO_0000712 label: gene_with_transcript_with_translational_frameshift + SubClassOf('gene_with_transcript_with_translational_frameshift' 'gene_with_recoded_mRNA') --- !New Class!: http://www.geneontology.org/go#GO_0001104 label: RNA polymerase II transcription cofactor activity + SubClassOf('RNA polymerase II transcription cofactor activity' 'RNA polymerase II transcription factor binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0016300 label: tRNA (uracil) methyltransferase activity + SubClassOf('tRNA (uracil) methyltransferase activity' 'tRNA methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0045960 label: positive regulation of complement activation, classical pathway + SubClassOf('positive regulation of complement activation, classical pathway' 'positive regulation of complement activation') + SubClassOf('positive regulation of complement activation, classical pathway' 'regulation of complement activation, classical pathway') --- !New Class!: http://www.geneontology.org/go#GO_0071255 label: CVT vesicle assembly + SubClassOf('CVT vesicle assembly' ObjectSomeValueFrom('part_of' 'CVT pathway')) --- !New Class!: http://www.geneontology.org/go#SO_0000321 label: mRNA_with_plus_1_frameshift + SubClassOf('mRNA_with_plus_1_frameshift' 'mRNA_with_frameshift') --- !New Class!: http://www.geneontology.org/go#GO_0000469 label: cleavage involved in rRNA processing + EquivalentClasses('cleavage involved in rRNA processing' ObjectSomeValueFrom('part_of' 'rRNA processing') ) + SubClassOf('cleavage involved in rRNA processing' ObjectSomeValueFrom('part_of' 'rRNA processing')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000181 label: MatureBCellNeoplasm + SubClassOf('MatureBCellNeoplasm' 'LymphoidNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0048096 label: chromatin-mediated maintenance of transcription + SubClassOf('chromatin-mediated maintenance of transcription' 'positive regulation of gene expression, epigenetic') + SubClassOf('chromatin-mediated maintenance of transcription' 'positive regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_2000804 label: regulation of termination of RNA polymerase II transcription, poly(A)-coupled + EquivalentClasses('regulation of termination of RNA polymerase II transcription, poly(A)-coupled' ObjectSomeValueFrom('regulates' 'termination of RNA polymerase II transcription, poly(A)-coupled') ) + SubClassOf('regulation of termination of RNA polymerase II transcription, poly(A)-coupled' 'regulation of transcription from RNA polymerase II promoter') + SubClassOf('regulation of termination of RNA polymerase II transcription, poly(A)-coupled' ObjectSomeValueFrom('regulates' 'termination of RNA polymerase II transcription, poly(A)-coupled')) + SubClassOf('regulation of termination of RNA polymerase II transcription, poly(A)-coupled' 'regulation of DNA-dependent transcription, termination') --- !New Class!: http://www.geneontology.org/go#SO_0000584 label: tmRNA + SubClassOf('tmRNA' 'small_regulatory_ncRNA') --- !New Class!: http://www.geneontology.org/go#GO_0031648 label: protein destabilization + SubClassOf('protein destabilization' 'regulation of protein stability') --- !New Class!: http://www.geneontology.org/go#GO_0006369 label: termination of RNA polymerase II transcription + SubClassOf('termination of RNA polymerase II transcription' 'DNA-dependent transcription, termination') + SubClassOf('termination of RNA polymerase II transcription' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000317 label: SuprarenalGlands + SubClassOf('SuprarenalGlands' 'EndocrineOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0006429 label: leucyl-tRNA aminoacylation + EquivalentClasses('leucyl-tRNA aminoacylation' 'mitochondrial leucyl-tRNA aminoacylation' ) + SubClassOf('leucyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- !New Class!: http://www.geneontology.org/go#GO_0001228 label: RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription + SubClassOf('RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' ObjectSomeValueFrom('part_of' 'positive regulation of transcription from RNA polymerase II promoter')) + SubClassOf('RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' 'sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000343 label: Midbrain + SubClassOf('Midbrain' 'Brain') --- !New Class!: http://www.geneontology.org/go#GO_0030510 label: regulation of BMP signaling pathway + SubClassOf('regulation of BMP signaling pathway' ObjectSomeValueFrom('regulates' 'BMP signaling pathway')) + EquivalentClasses('regulation of BMP signaling pathway' ObjectSomeValueFrom('regulates' 'BMP signaling pathway') ) --- !New Class!: http://www.geneontology.org/go#GO_0002131 label: wobble position cytosine ribose methylation + SubClassOf('wobble position cytosine ribose methylation' 'wobble position ribose methylation') --- !New Class!: http://www.geneontology.org/go#GO_0031124 label: mRNA 3'-end processing + SubClassOf('mRNA 3'-end processing' 'mRNA processing') + SubClassOf('mRNA 3'-end processing' 'RNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#GO_2000806 label: positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled + SubClassOf('positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled' ObjectSomeValueFrom('positively_regulates' 'termination of RNA polymerase II transcription, poly(A)-coupled')) + SubClassOf('positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled' 'regulation of termination of RNA polymerase II transcription, poly(A)-coupled') + EquivalentClasses('positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled' ObjectSomeValueFrom('positively_regulates' 'termination of RNA polymerase II transcription, poly(A)-coupled') ) + SubClassOf('positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled' 'positive regulation of DNA-dependent transcription, termination') --- !New Class!: http://www.geneontology.org/go#GO_0031053 label: primary miRNA processing + SubClassOf('primary miRNA processing' 'ncRNA processing') + SubClassOf('primary miRNA processing' ObjectSomeValueFrom('part_of' 'production of miRNAs involved in gene silencing by miRNA')) --- !New Class!: http://www.geneontology.org/go#SO_0001206 label: T3_RNA_Polymerase_Promoter + SubClassOf('T3_RNA_Polymerase_Promoter' 'Phage_RNA_Polymerase_Promoter') --- !New Class!: http://www.geneontology.org/go#GO_0042757 label: giant axon + SubClassOf('giant axon' 'axon') --- !New Class!: http://www.geneontology.org/go#GO_0061504 label: cyclic threonylcarbamoyladenosine biosynthetic process + SubClassOf('cyclic threonylcarbamoyladenosine biosynthetic process' 'tRNA modification') --- !New Class!: http://www.geneontology.org/go#GO_1900369 label: negative regulation of RNA interference + EquivalentClasses('negative regulation of RNA interference' ObjectSomeValueFrom('negatively_regulates' 'RNA interference') ) + SubClassOf('negative regulation of RNA interference' 'negative regulation of posttranscriptional gene silencing') + SubClassOf('negative regulation of RNA interference' 'negative regulation of gene silencing by RNA') + SubClassOf('negative regulation of RNA interference' ObjectSomeValueFrom('negatively_regulates' 'RNA interference')) + SubClassOf('negative regulation of RNA interference' 'regulation of RNA interference') --- !New Class!: http://www.geneontology.org/go#GO_2001164 label: negative regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues + SubClassOf('negative regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' ObjectSomeValueFrom('negatively_regulates' 'phosphorylation of RNA polymerase II C-terminal domain serine 2 residues')) + SubClassOf('negative regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' 'negative regulation of phosphorylation of RNA polymerase II C-terminal domain') + SubClassOf('negative regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' 'regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues') + EquivalentClasses('negative regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' ObjectSomeValueFrom('negatively_regulates' 'phosphorylation of RNA polymerase II C-terminal domain serine 2 residues') ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000105 label: Blood + SubClassOf('Blood' 'ConnectiveTissue') --- !New Class!: http://www.geneontology.org/go#OMIT_0000307 label: Rectum + SubClassOf('Rectum' 'DigestiveOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0042715 label: dosage compensation complex assembly involved in dosage compensation by hypoactivation of X chromosome + EquivalentClasses('dosage compensation complex assembly involved in dosage compensation by hypoactivation of X chromosome' ObjectIntersectionOf('dosage compensation complex assembly' ObjectSomeValueFrom('part_of' 'dosage compensation by hypoactivation of X chromosome')) ) + SubClassOf('dosage compensation complex assembly involved in dosage compensation by hypoactivation of X chromosome' ObjectSomeValueFrom('part_of' 'dosage compensation by hypoactivation of X chromosome')) + SubClassOf('dosage compensation complex assembly involved in dosage compensation by hypoactivation of X chromosome' 'dosage compensation complex assembly') --- !New Class!: http://www.geneontology.org/go#GO_0044308 label: axonal spine + SubClassOf('axonal spine' 'neuron spine') + SubClassOf('axonal spine' 'axon part') --- !New Class!: http://www.geneontology.org/go#GO_1900401 label: regulation of meiosis by regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of meiosis by regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('regulation of meiosis by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#OMIT_0000129 label: NutritionalDisease + SubClassOf('NutritionalDisease' 'Disease') --- !New Class!: http://www.geneontology.org/go#GO_2001209 label: positive regulation of transcription elongation from RNA polymerase I promoter + EquivalentClasses('positive regulation of transcription elongation from RNA polymerase I promoter' ObjectSomeValueFrom('positively_regulates' 'transcription elongation from RNA polymerase I promoter') ) + SubClassOf('positive regulation of transcription elongation from RNA polymerase I promoter' 'positive regulation of DNA-dependent transcription, elongation') + SubClassOf('positive regulation of transcription elongation from RNA polymerase I promoter' ObjectSomeValueFrom('positively_regulates' 'transcription elongation from RNA polymerase I promoter')) + SubClassOf('positive regulation of transcription elongation from RNA polymerase I promoter' 'regulation of transcription elongation from RNA polymerase I promoter') --- !New Class!: http://www.geneontology.org/go#GO_0061411 label: positive regulation of transcription from RNA polymerase II promoter in response to cold + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to cold' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#span_ProcessAggregate label: process_aggregate + SubClassOf('process_aggregate' 'processual_entity') + DisjointClasses('fiat_process_part' 'process_aggregate') + DisjointClasses('process' 'process'Aggregate) + DisjointClasses('process_aggregate' 'process_boundary') + DisjointClasses('process_aggregate' 'processual_context') --- !New Class!: http://www.geneontology.org/go#GO_0001036 label: transcription initiation from RNA polymerase III hybrid type promoter + SubClassOf('transcription initiation from RNA polymerase III hybrid type promoter' ObjectSomeValueFrom('part_of' 'transcription from a RNA polymerase III hybrid type promoter')) + SubClassOf('transcription initiation from RNA polymerase III hybrid type promoter' 'transcription initiation from RNA polymerase III promoter') --- !New Class!: http://www.geneontology.org/go#GO_0000494 label: box C/D snoRNA 3'-end processing + SubClassOf('box C/D snoRNA 3'-end processing' 'box C/D snoRNA processing') + SubClassOf('box C/D snoRNA 3'-end processing' 'snoRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#GO_0032785 label: negative regulation of DNA-dependent transcription, elongation + EquivalentClasses('negative regulation of DNA-dependent transcription, elongation' ObjectSomeValueFrom('negatively_regulates' 'DNA-dependent transcription, elongation') ) + SubClassOf('negative regulation of DNA-dependent transcription, elongation' 'regulation of DNA-dependent transcription, elongation') + SubClassOf('negative regulation of DNA-dependent transcription, elongation' ObjectSomeValueFrom('negatively_regulates' 'DNA-dependent transcription, elongation')) --- !New Class!: http://www.geneontology.org/go#GO_0001026 label: TFIIIB-type transcription factor activity + SubClassOf('TFIIIB-type transcription factor activity' 'RNA polymerase III transcription factor binding transcription factor activity') + SubClassOf('TFIIIB-type transcription factor activity' 'core RNA polymerase III binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0033419 label: CUA codon-amino acid adaptor activity + SubClassOf('CUA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0002107 label: generation of mature 3'-end of 5S rRNA generated by RNA polymerase III + SubClassOf('generation of mature 3'-end of 5S rRNA generated by RNA polymerase III' 'rRNA 3'-end processing') + SubClassOf('generation of mature 3'-end of 5S rRNA generated by RNA polymerase III' 'maturation of 5S rRNA') --- !New Class!: http://www.geneontology.org/go#OMIT_0000373 label: Pharynx + SubClassOf('Pharynx' 'UpperRespiratoryTract') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_89593 label: Craniata + SubClassOf('Craniata' 'Chordata') --- !New Class!: http://www.geneontology.org/go#GO_0030697 label: S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity + SubClassOf('S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity' 'tRNA (m5U54) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0042791 label: 5S class rRNA transcription from RNA polymerase III type 1 promoter + SubClassOf('5S class rRNA transcription from RNA polymerase III type 1 promoter' 'transcription from RNA polymerase III promoter') + SubClassOf('5S class rRNA transcription from RNA polymerase III type 1 promoter' 'rRNA transcription') --- !New Class!: http://www.geneontology.org/go#GO_0002183 label: cytoplasmic translational initiation + SubClassOf('cytoplasmic translational initiation' ObjectSomeValueFrom('part_of' 'cytoplasmic translation')) + SubClassOf('cytoplasmic translational initiation' 'translational initiation') --- !New Class!: http://www.geneontology.org/go#GO_0010955 label: negative regulation of protein processing + SubClassOf('negative regulation of protein processing' ObjectSomeValueFrom('negatively_regulates' 'protein processing')) + EquivalentClasses('negative regulation of protein processing' ObjectSomeValueFrom('negatively_regulates' 'protein processing') ) + SubClassOf('negative regulation of protein processing' 'regulation of protein processing') --- !New Class!: http://www.geneontology.org/go#SO_0000335 label: mRNA_with_minus_2_frameshift + SubClassOf('mRNA_with_minus_2_frameshift' 'mRNA_with_frameshift') --- !New Class!: http://www.geneontology.org/go#GO_0021777 label: BMP signaling pathway involved in spinal cord association neuron specification + EquivalentClasses('BMP signaling pathway involved in spinal cord association neuron specification' 'BMP signaling pathway' ) + SubClassOf('BMP signaling pathway involved in spinal cord association neuron specification' 'regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification') + SubClassOf('BMP signaling pathway involved in spinal cord association neuron specification' 'BMP signaling pathway involved in spinal cord dorsal/ventral patterning') --- !New Class!: http://www.geneontology.org/go#GO_0006420 label: arginyl-tRNA aminoacylation + EquivalentClasses('arginyl-tRNA aminoacylation' 'mitochondrial arginyl-tRNA aminoacylation' ) + SubClassOf('arginyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- !New Class!: http://www.geneontology.org/go#GO_0016429 label: tRNA (adenine-N1-)-methyltransferase activity + SubClassOf('tRNA (adenine-N1-)-methyltransferase activity' 'tRNA (adenine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#SO_0000096 label: proplastid_gene + SubClassOf('proplastid_gene' 'plastid_gene') --- !New Class!: http://www.geneontology.org/go#snap_Role label: role + DisjointClasses('disposition' 'role') + SubClassOf('role' 'realizable_entity') + DisjointClasses('function' 'role') --- !New Class!: http://www.geneontology.org/go#SO_0001867 label: candidate_gene + SubClassOf('candidate_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000324 label: Spleen + SubClassOf('Spleen' 'HematopoieiticOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0071430 label: pre-miRNA-containing ribonucleoprotein complex export from nucleus + SubClassOf('pre-miRNA-containing ribonucleoprotein complex export from nucleus' ObjectSomeValueFrom('has_part' 'pre-miRNA export from nucleus')) --- !New Class!: http://www.geneontology.org/go#GO_0001087 label: TFIIB-class binding transcription factor activity + SubClassOf('TFIIB-class binding transcription factor activity' 'RNA polymerase II basal transcription factor binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0002101 label: tRNA wobble cytosine modification + SubClassOf('tRNA wobble cytosine modification' 'tRNA wobble base modification') --- !New Class!: http://www.geneontology.org/go#GO_0044464 label: cell part + SubClassOf('cell part' 'cellular_component') + EquivalentClasses('cell part' ObjectIntersectionOf('cellular_component' ObjectSomeValueFrom('part_of' 'cell')) ) + SubClassOf('cell part' ObjectSomeValueFrom('part_of' 'cell')) --- !New Class!: http://www.geneontology.org/go#SO_0000092 label: ct_gene + SubClassOf('ct_gene' 'plastid_gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000141 label: CardiovascularDisease + SubClassOf('CardiovascularDisease' 'OrganSystemDisease') --- !New Class!: http://www.geneontology.org/go#GO_0001004 label: RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity + SubClassOf('RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity' 'sequence-specific DNA binding RNA polymerase III transcription factor activity') + SubClassOf('RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity' 'sequence-specific DNA binding transcription factor recruiting transcription factor activity') + SubClassOf('RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity' 'RNA polymerase III transcription factor recruiting transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_1900546 label: positive regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'positive regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('positive regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' 'regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0042464 label: dosage compensation by hypoactivation of X chromosome + SubClassOf('dosage compensation by hypoactivation of X chromosome' 'dosage compensation') --- !New Class!: http://www.geneontology.org/go#GO_0033168 label: conversion of ds siRNA to ss siRNA involved in RNA interference + EquivalentClasses('conversion of ds siRNA to ss siRNA involved in RNA interference' ObjectIntersectionOf('conversion of ds siRNA to ss siRNA' ObjectSomeValueFrom('part_of' 'RNA interference')) ) + SubClassOf('conversion of ds siRNA to ss siRNA involved in RNA interference' ObjectSomeValueFrom('part_of' 'production of siRNA involved in RNA interference')) + SubClassOf('conversion of ds siRNA to ss siRNA involved in RNA interference' 'conversion of ds siRNA to ss siRNA') --- !New Class!: http://www.geneontology.org/go#span_ProcessualEntity label: processual_entity + SubClassOf('processual_entity' 'occurrent') + DisjointClasses('processual_entity' 'spatiotemporal_region') + EquivalentClasses('process'ualEntity ObjectUnionOf('fiat_process_part' 'process' 'process'Aggregate 'process'Boundary 'process'ualContext) ) + DisjointClasses('processual_entity' 'temporal_region') --- !New Class!: http://www.geneontology.org/go#OMIT_0000081 label: RadialGlialCell + SubClassOf('RadialGlialCell' 'MacroglialCell') --- !New Class!: http://www.geneontology.org/go#GO_0045898 label: regulation of RNA polymerase II transcriptional preinitiation complex assembly + SubClassOf('regulation of RNA polymerase II transcriptional preinitiation complex assembly' 'regulation of transcription initiation from RNA polymerase II promoter') + SubClassOf('regulation of RNA polymerase II transcriptional preinitiation complex assembly' ObjectSomeValueFrom('regulates' 'RNA polymerase II transcriptional preinitiation complex assembly')) + EquivalentClasses('regulation of RNA polymerase II transcriptional preinitiation complex assembly' ObjectSomeValueFrom('regulates' 'RNA polymerase II transcriptional preinitiation complex assembly') ) --- !New Class!: http://www.geneontology.org/go#GO_0042793 label: transcription from plastid promoter + SubClassOf('transcription from plastid promoter' 'transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#OMIT_0000286 label: RightVentricle + SubClassOf('RightVentricle' 'Ventricles') --- !New Class!: http://www.geneontology.org/go#GO_0038053 label: estrogen-activated RNA polymerase II transcription factor binding transcription factor activity + SubClassOf('estrogen-activated RNA polymerase II transcription factor binding transcription factor activity' 'ligand-activated RNA polymerase II transcription factor binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_339960 label: Katablepharidophyta + SubClassOf('Katablepharidophyta' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#MOD_00427 label: methylated residue + SubClassOf('methylated residue' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#OMIT_0000356 label: UterineTubes + SubClassOf('UterineTubes' 'FemaleReproductiveSystem') --- !New Class!: http://www.geneontology.org/go#OMIT_0000305 label: Mesentery + SubClassOf('Mesentery' 'DigestiveOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0006415 label: translational termination + EquivalentClasses('translational termination' 'mitochondrial translational termination' ) + SubClassOf('translational termination' ObjectSomeValueFrom('part_of' 'translation')) --- !New Class!: http://www.geneontology.org/go#GO_0008033 label: tRNA processing + SubClassOf('tRNA processing' 'ncRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0044630 label: modulation of complement activation, lectin pathway in other organism + SubClassOf('modulation of complement activation, lectin pathway in other organism' 'regulation of complement activation, lectin pathway') --- !New Class!: http://www.geneontology.org/go#GO_0070816 label: phosphorylation of RNA polymerase II C-terminal domain + SubClassOf('phosphorylation of RNA polymerase II C-terminal domain' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0002105 label: endonucleolytic cleaveage between LSU-rRNA and 4.5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) + SubClassOf('endonucleolytic cleaveage between LSU-rRNA and 4.5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)' 'endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)') --- !New Class!: http://www.geneontology.org/go#GO_1902352 label: negative regulation of filamentous growth of a population of unicellular organisms in response to starvation by negative regulation of transcription from RNA polymerase II promoter + SubClassOf('negative regulation of filamentous growth of a population of unicellular organisms in response to starvation by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of filamentous growth of a population of unicellular organisms in response to starvation by negative regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0001149 label: bacterial-type RNA polymerase termination site sequence-specific DNA binding transcription factor activity + SubClassOf('bacterial-type RNA polymerase termination site sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity') --- !New Class!: http://www.geneontology.org/go#SO_0001913 label: bacterial_RNApol_promoter_sigma_ecf + SubClassOf('bacterial_RNApol_promoter_sigma_ecf' 'bacterial_RNApol_promoter') --- !New Class!: http://www.geneontology.org/go#SO_0000605 label: intergenic_region + SubClassOf('intergenic_region' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0010689 label: negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to chemical stimulus + SubClassOf('negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to chemical stimulus' 'negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0043922 label: negative regulation by host of viral transcription + SubClassOf('negative regulation by host of viral transcription' 'modulation by host of viral transcription') + SubClassOf('negative regulation by host of viral transcription' 'negative regulation of viral transcription') --- !New Class!: http://www.geneontology.org/go#GO_0071263 label: negative regulation of translational initiation in response to starvation + SubClassOf('negative regulation of translational initiation in response to starvation' 'regulation of translational initiation in response to starvation') + SubClassOf('negative regulation of translational initiation in response to starvation' 'negative regulation of translational initiation in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0080111 label: DNA demethylation + SubClassOf('DNA demethylation' 'regulation of gene expression, epigenetic') --- !New Class!: http://www.geneontology.org/go#GO_0044324 label: regulation of transcription involved in anterior/posterior axis specification + EquivalentClasses('regulation of transcription, DNA-dependent' 'regulation of transcription involved in anterior/posterior axis specification' ) + SubClassOf('regulation of transcription involved in anterior/posterior axis specification' 'regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0000473 label: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) + SubClassOf('maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' 'maturation of LSU-rRNA') --- !New Class!: http://www.geneontology.org/go#SO_0000093 label: chromoplast_gene + SubClassOf('chromoplast_gene' 'plastid_gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000336 label: CentralNervousSystem + SubClassOf('CentralNervousSystem' 'NervousOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0039652 label: activation by virus of host NF-kappaB transcription factor activity + SubClassOf('activation by virus of host NF-kappaB transcription factor activity' 'modulation by virus of host transcription') --- !New Class!: http://www.geneontology.org/go#GO_1901310 label: positive regulation of sterol regulatory element binding protein cleavage + SubClassOf('positive regulation of sterol regulatory element binding protein cleavage' 'positive regulation of protein processing') + EquivalentClasses('positive regulation of sterol regulatory element binding protein cleavage' ObjectSomeValueFrom('positively_regulates' 'sterol regulatory element binding protein cleavage') ) + SubClassOf('positive regulation of sterol regulatory element binding protein cleavage' ObjectSomeValueFrom('positively_regulates' 'sterol regulatory element binding protein cleavage')) + SubClassOf('positive regulation of sterol regulatory element binding protein cleavage' 'regulation of sterol regulatory element binding protein cleavage') --- !New Class!: http://www.geneontology.org/go#GO_0006400 label: tRNA modification + SubClassOf('tRNA modification' 'tRNA processing') + EquivalentClasses('tRNA modification' 'mitochondrial tRNA modification' ) --- !New Class!: http://www.geneontology.org/go#GO_0070323 label: positive regulation of translation in response to nitrogen starvation + SubClassOf('positive regulation of translation in response to nitrogen starvation' 'regulation of translation in response to nitrogen starvation') + SubClassOf('positive regulation of translation in response to nitrogen starvation' 'positive regulation of translation in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0043555 label: regulation of translation in response to stress + SubClassOf('regulation of translation in response to stress' 'regulation of translation') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_607660 label: Ponginae + SubClassOf('Ponginae' 'Hominidae') --- !New Class!: http://www.geneontology.org/go#GO_0045904 label: negative regulation of translational termination + SubClassOf('negative regulation of translational termination' 'negative regulation of translation') + SubClassOf('negative regulation of translational termination' ObjectSomeValueFrom('negatively_regulates' 'translational termination')) + SubClassOf('negative regulation of translational termination' 'regulation of translational termination') + EquivalentClasses('negative regulation of translational termination' ObjectSomeValueFrom('negatively_regulates' 'translational termination') ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000073 label: Neutrophils + SubClassOf('Neutrophils' 'Granulocyte') --- !New Class!: http://www.geneontology.org/go#SO_0000094 label: cyanelle_gene + SubClassOf('cyanelle_gene' 'plastid_gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000364 label: Testes + SubClassOf('Testes' 'MaleReproductiveSystem') --- !New Class!: http://www.geneontology.org/go#GO_0031441 label: negative regulation of mRNA 3'-end processing + SubClassOf('negative regulation of mRNA 3'-end processing' ObjectSomeValueFrom('negatively_regulates' 'mRNA 3'-end processing')) + EquivalentClasses('negative regulation of mRNA 3'-end processing' ObjectSomeValueFrom('negatively_regulates' 'mRNA 3'-end processing') ) + SubClassOf('negative regulation of mRNA 3'-end processing' 'regulation of mRNA 3'-end processing') + SubClassOf('negative regulation of mRNA 3'-end processing' 'negative regulation of mRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0097457 label: hippocampal mossy fiber + SubClassOf('hippocampal mossy fiber' 'dentate gyrus mossy fiber') --- !New Class!: http://www.geneontology.org/go#GO_0061426 label: positive regulation of sulfite transport by positive regulation of transcription from RNA polymerase II promoter + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of sulfite transport by positive regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('positive regulation of sulfite transport by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0006356 label: regulation of transcription from RNA polymerase I promoter + SubClassOf('regulation of transcription from RNA polymerase I promoter' 'regulation of transcription, DNA-dependent') + EquivalentClasses('regulation of transcription from RNA polymerase I promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase I promoter') ) + EquivalentClasses('regulation of transcription from RNA polymerase I promoter' 'regulation of transcription from RNA polymerase I promoter, mitotic' ) + SubClassOf('regulation of transcription from RNA polymerase I promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase I promoter')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000152 label: MuscleOrigin + SubClassOf('MuscleOrigin' 'BenignNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0032897 label: negative regulation of viral transcription + EquivalentClasses('negative regulation of viral transcription' ObjectSomeValueFrom('negatively_regulates' 'viral transcription') ) + SubClassOf('negative regulation of viral transcription' ObjectSomeValueFrom('negatively_regulates' 'viral transcription')) + SubClassOf('negative regulation of viral transcription' 'regulation of viral transcription') --- !New Class!: http://www.geneontology.org/go#OMIT_0000078 label: Astrocyte + SubClassOf('Astrocyte' 'MacroglialCell') --- !New Class!: http://www.geneontology.org/go#OMIT_0000367 label: UpperRespiratoryTract + SubClassOf('UpperRespiratoryTract' 'RespiratoryOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0000461 label: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) + SubClassOf('endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) + SubClassOf('endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'rRNA 3'-end processing') + SubClassOf('endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)') --- !New Class!: http://www.geneontology.org/go#GO_0070143 label: mitochondrial alanyl-tRNA aminoacylation + EquivalentClasses('alanyl-tRNA aminoacylation' 'mitochondrial alanyl-tRNA aminoacylation' ) + SubClassOf('mitochondrial alanyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') + SubClassOf('mitochondrial alanyl-tRNA aminoacylation' 'alanyl-tRNA aminoacylation') --- !New Class!: http://www.geneontology.org/go#GO_0035954 label: positive regulation of dipeptide transport by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of dipeptide transport by positive regulation of transcription from RNA polymerase II promoter' 'regulation of dipeptide transport by regulation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of dipeptide transport by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of oligopeptide transport by positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of dipeptide transport by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_0044528 label: regulation of mitochondrial mRNA stability + SubClassOf('regulation of mitochondrial mRNA stability' 'regulation of mRNA stability') --- !New Class!: http://www.geneontology.org/go#GO_0070153 label: mitochondrial leucyl-tRNA aminoacylation + SubClassOf('mitochondrial leucyl-tRNA aminoacylation' 'leucyl-tRNA aminoacylation') + SubClassOf('mitochondrial leucyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') + EquivalentClasses('leucyl-tRNA aminoacylation' 'mitochondrial leucyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0005883 label: neurofilament + SubClassOf('neurofilament' ObjectSomeValueFrom('part_of' 'neurofilament cytoskeleton')) + SubClassOf('neurofilament' 'axon part') + EquivalentClasses('neurofilament' ObjectSomeValueFrom('part_of' 'axon') ) --- !New Class!: http://www.geneontology.org/go#GO_1900412 label: regulation of histone methylation by regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of histone methylation by regulation of transcription from RNA polymerase II promoter' 'regulation of histone modification by regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of histone methylation by regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#SO_0000098 label: plasmid_gene + SubClassOf('plasmid_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0001215 label: metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription + SubClassOf('metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription' 'metal ion regulated sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription') + SubClassOf('metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription' 'metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000328 label: LymphNodes + SubClassOf('LymphNodes' 'LymphaticOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0007225 label: patched ligand maturation + SubClassOf('patched ligand maturation' 'protein maturation') --- !New Class!: http://www.geneontology.org/go#OMIT_0000319 label: AnteriorPituitary + SubClassOf('AnteriorPituitary' 'Pituitary') --- !New Class!: http://www.geneontology.org/go#GO_0008079 label: translation termination factor activity + SubClassOf('translation termination factor activity' ObjectSomeValueFrom('part_of' 'translational termination')) + SubClassOf('translation termination factor activity' 'translation factor activity, nucleic acid binding') --- !New Class!: http://www.geneontology.org/go#GO_0000433 label: negative regulation of transcription from RNA polymerase II promoter by glucose + SubClassOf('negative regulation of transcription from RNA polymerase II promoter by glucose' 'carbon catabolite repression of transcription from RNA polymerase II promoter') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter by glucose' 'negative regulation of transcription by glucose') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter by glucose' 'regulation of transcription from RNA polymerase II promoter by glucose') --- !New Class!: http://www.geneontology.org/go#GO_0030702 label: chromatin silencing at centromere + SubClassOf('chromatin silencing at centromere' 'chromatin silencing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000329 label: LymphaticVessels + SubClassOf('LymphaticVessels' 'LymphaticOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0060053 label: neurofilament cytoskeleton + SubClassOf('neurofilament cytoskeleton' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0005575 label: cellular_component + SubClassOf('cellular_component' 'object') + DisjointClasses('cellular_component' 'biological_process') --- !New Class!: http://www.geneontology.org/go#GO_0035392 label: maintenance of chromatin silencing at telomere + SubClassOf('maintenance of chromatin silencing at telomere' ObjectSomeValueFrom('part_of' 'chromatin silencing at telomere')) + SubClassOf('maintenance of chromatin silencing at telomere' 'maintenance of chromatin silencing') --- !New Class!: http://www.geneontology.org/go#GO_0043484 label: regulation of RNA splicing + SubClassOf('regulation of RNA splicing' ObjectSomeValueFrom('regulates' 'RNA splicing')) + SubClassOf('regulation of RNA splicing' 'regulation of gene expression') + EquivalentClasses('regulation of RNA splicing' ObjectSomeValueFrom('regulates' 'RNA splicing') ) --- !New Class!: http://www.geneontology.org/go#GO_0043827 label: tRNA (adenine-57, 58-N(1)-) methyltransferase activity + SubClassOf('tRNA (adenine-57, 58-N(1)-) methyltransferase activity' 'tRNA (adenine-N1-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000128 label: Neoplasia + SubClassOf('Neoplasia' 'Disease') --- !New Class!: http://www.geneontology.org/go#GO_0060821 label: inactivation of X chromosome by DNA methylation + SubClassOf('inactivation of X chromosome by DNA methylation' 'dosage compensation by inactivation of X chromosome') --- !New Class!: http://www.geneontology.org/go#OMIT_0000340 label: Brainstem + SubClassOf('Brainstem' 'Brain') --- !New Class!: http://www.geneontology.org/go#OMIT_0000346 label: SomaticNervousSystem + SubClassOf('SomaticNervousSystem' 'PeripheralNervousSystem') --- !New Class!: http://www.geneontology.org/go#GO_0071050 label: snoRNA polyadenylation + SubClassOf('snoRNA polyadenylation' 'ncRNA polyadenylation') --- !New Class!: http://www.geneontology.org/go#GO_0006351 label: transcription, DNA-dependent + EquivalentClasses('transcription, DNA-dependent' 'transcription from mitochondrial promoter' ) + SubClassOf('transcription, DNA-dependent' ObjectSomeValueFrom('part_of' 'gene expression')) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_9263 label: Metatheria + SubClassOf('Metatheria' 'Theria') --- !New Class!: http://www.geneontology.org/go#GO_1901535 label: regulation of DNA demethylation + SubClassOf('regulation of DNA demethylation' ObjectSomeValueFrom('regulates' 'DNA demethylation')) + EquivalentClasses('regulation of DNA demethylation' ObjectSomeValueFrom('regulates' 'DNA demethylation') ) --- !New Class!: http://www.geneontology.org/go#GO_0034403 label: alignment of 3' and 5' splice sites of mRNA + SubClassOf('alignment of 3' and 5' splice sites of mRNA' ObjectSomeValueFrom('part_of' 'generation of catalytic spliceosome for second transesterification step')) + SubClassOf('alignment of 3' and 5' splice sites of mRNA' 'mRNA 5'-splice site recognition') + SubClassOf('alignment of 3' and 5' splice sites of mRNA' 'mRNA 3'-splice site recognition') --- !New Class!: http://www.geneontology.org/go#GO_0032055 label: negative regulation of translation in response to stress + SubClassOf('negative regulation of translation in response to stress' 'regulation of translation in response to stress') + SubClassOf('negative regulation of translation in response to stress' 'negative regulation of translation') --- !New Class!: http://www.geneontology.org/go#GO_0038167 label: epidermal growth factor receptor signaling pathway via positive regulation of NF-kappaB transcription factor activity + SubClassOf('epidermal growth factor receptor signaling pathway via positive regulation of NF-kappaB transcription factor activity' ObjectSomeValueFrom('has_part' 'positive regulation of NF-kappaB transcription factor activity')) --- !New Class!: http://www.geneontology.org/go#GO_0001055 label: RNA polymerase II activity + SubClassOf('RNA polymerase II activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter')) + EquivalentClasses('RNA polymerase II activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_0061422 label: positive regulation of transcription from RNA polymerase II promoter in response to alkalinity + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to alkalinity' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#SO_0001203 label: RNA_polymerase_promoter + SubClassOf('RNA_polymerase_promoter' 'promoter') --- !New Class!: http://www.geneontology.org/go#OMIT_0000221 label: PapillaryPulmonaryAdenocarcinoma + SubClassOf('PapillaryPulmonaryAdenocarcinoma' 'PulmonaryAdenocarcinoma') --- !New Class!: http://www.geneontology.org/go#GO_0001175 label: transcriptional start site selection at RNA polymerase III promoter + SubClassOf('transcriptional start site selection at RNA polymerase III promoter' 'DNA-dependent transcriptional start site selection') + SubClassOf('transcriptional start site selection at RNA polymerase III promoter' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase III promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0070903 label: mitochondrial tRNA thio-modification + SubClassOf('mitochondrial tRNA thio-modification' 'tRNA thio-modification') + SubClassOf('mitochondrial tRNA thio-modification' 'mitochondrial tRNA modification') + EquivalentClasses('tRNA thio-modification' 'mitochondrial tRNA thio-modification' ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000280 label: RightAtrium + SubClassOf('RightAtrium' 'Atria') --- !New Class!: http://www.geneontology.org/go#GO_0044030 label: regulation of DNA methylation + EquivalentClasses('regulation of DNA methylation' ObjectSomeValueFrom('regulates' 'DNA methylation') ) + SubClassOf('regulation of DNA methylation' ObjectSomeValueFrom('regulates' 'DNA methylation')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000338 label: Brain + SubClassOf('Brain' 'CentralNervousSystem') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_554296 label: Apusozoa + SubClassOf('Apusozoa' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#GO_0006451 label: translational readthrough + SubClassOf('translational readthrough' 'translational elongation') + SubClassOf('translational readthrough' 'regulation of translation') --- !New Class!: http://www.geneontology.org/go#GO_0008380 label: RNA splicing + SubClassOf('RNA splicing' 'RNA processing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000155 label: GlomusTumor + SubClassOf('GlomusTumor' 'ConnectiveOrigin') --- !New Class!: http://www.geneontology.org/go#MOD_00703 label: isoprenylated residue + SubClassOf('isoprenylated residue' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_0060803 label: BMP signaling pathway involved in mesodermal cell fate specification + EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in mesodermal cell fate specification' ) + SubClassOf('BMP signaling pathway involved in mesodermal cell fate specification' 'regulation of transcription involved in primary germ layer cell fate commitment') + SubClassOf('BMP signaling pathway involved in mesodermal cell fate specification' 'BMP signaling pathway') --- !New Class!: http://www.geneontology.org/go#GO_0001010 label: sequence-specific DNA binding transcription factor recruiting transcription factor activity + SubClassOf('sequence-specific DNA binding transcription factor recruiting transcription factor activity' 'sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0006368 label: transcription elongation from RNA polymerase II promoter + SubClassOf('transcription elongation from RNA polymerase II promoter' 'DNA-dependent transcription, elongation') + SubClassOf('transcription elongation from RNA polymerase II promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#PR_000002970 label: pre-translationally modified amino-acid residue + SubClassOf('pre-translationally modified amino-acid residue' 'modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_0010688 label: negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter + SubClassOf('negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') + SubClassOf('negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter' 'regulation of ribosomal protein gene transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0010609 label: mRNA localization resulting in posttranscriptional regulation of gene expression + SubClassOf('mRNA localization resulting in posttranscriptional regulation of gene expression' 'posttranscriptional regulation of gene expression') + EquivalentClasses('mRNA localization resulting in posttranscriptional regulation of gene expression' ObjectSomeValueFrom('results_in' 'posttranscriptional regulation of gene expression') ) --- !New Class!: http://www.geneontology.org/go#GO_0031554 label: regulation of DNA-dependent transcription, termination + SubClassOf('regulation of DNA-dependent transcription, termination' 'regulation of transcription, DNA-dependent') + SubClassOf('regulation of DNA-dependent transcription, termination' ObjectSomeValueFrom('regulates' 'DNA-dependent transcription, termination')) + EquivalentClasses('regulation of DNA-dependent transcription, termination' ObjectSomeValueFrom('regulates' 'DNA-dependent transcription, termination') ) --- !New Class!: http://www.geneontology.org/go#GO_0097441 label: basilar dendrite + SubClassOf('basilar dendrite' 'dendrite') --- !New Class!: http://www.geneontology.org/go#GO_0070322 label: negative regulation of translation in response to nitrogen starvation + SubClassOf('negative regulation of translation in response to nitrogen starvation' 'regulation of translation in response to nitrogen starvation') + SubClassOf('negative regulation of translation in response to nitrogen starvation' 'negative regulation of translation in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0033406 label: UCC codon-amino acid adaptor activity + SubClassOf('UCC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0000476 label: maturation of 4.5S rRNA + SubClassOf('maturation of 4.5S rRNA' 'rRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0032793 label: positive regulation of CREB transcription factor activity + SubClassOf('positive regulation of CREB transcription factor activity' 'positive regulation of sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_1900363 label: regulation of mRNA polyadenylation + SubClassOf('regulation of mRNA polyadenylation' 'regulation of mRNA 3'-end processing') + SubClassOf('regulation of mRNA polyadenylation' ObjectSomeValueFrom('regulates' 'mRNA polyadenylation')) + EquivalentClasses('regulation of mRNA polyadenylation' ObjectSomeValueFrom('regulates' 'mRNA polyadenylation') ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000199 label: AnaplasticLargeCellLymphoma + SubClassOf('AnaplasticLargeCellLymphoma' 'MatureTOrNKCellNeoplasm') --- !New Class!: http://www.geneontology.org/go#OMIT_0000228 label: Surgery + SubClassOf('Surgery' 'Treatment') --- !New Class!: http://www.geneontology.org/go#GO_2000824 label: negative regulation of androgen receptor activity + SubClassOf('negative regulation of androgen receptor activity' 'negative regulation of sequence-specific DNA binding transcription factor activity') + SubClassOf('negative regulation of androgen receptor activity' 'regulation of androgen receptor activity') + EquivalentClasses('negative regulation of androgen receptor activity' ObjectSomeValueFrom('negatively_regulates' 'androgen receptor activity') ) + SubClassOf('negative regulation of androgen receptor activity' ObjectSomeValueFrom('negatively_regulates' 'androgen receptor activity')) --- !New Class!: http://www.geneontology.org/go#GO_0043198 label: dendritic shaft + SubClassOf('dendritic shaft' 'neuron part') + SubClassOf('dendritic shaft' ObjectSomeValueFrom('part_of' 'dendrite')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000085 label: OtherMiRNA + SubClassOf('OtherMiRNA' 'miRNA') --- !New Class!: http://www.geneontology.org/go#GO_0033410 label: UAC codon-amino acid adaptor activity + SubClassOf('UAC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0001138 label: TFIIH-class transcription factor recruiting transcription factor activity + SubClassOf('TFIIH-class transcription factor recruiting transcription factor activity' 'RNA polymerase II transcription factor recruiting transcription factor activity') + SubClassOf('TFIIH-class transcription factor recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase II transcriptional preinitiation complex assembly')) + SubClassOf('TFIIH-class transcription factor recruiting transcription factor activity' 'TFIIH-class binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0045301 label: tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity + SubClassOf('tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity' ObjectSomeValueFrom('part_of' '2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine-tRNA biosynthesis')) --- !New Class!: http://www.geneontology.org/go#GO_0071620 label: phosphorylation of RNA polymerase II C-terminal domain serine 5 residues + SubClassOf('phosphorylation of RNA polymerase II C-terminal domain serine 5 residues' 'phosphorylation of RNA polymerase II C-terminal domain') --- !New Class!: http://www.geneontology.org/go#SO_0000100 label: endogenous_retroviral_gene + SubClassOf('endogenous_retroviral_gene' 'proviral_gene') --- !New Class!: http://www.geneontology.org/go#GO_0010723 label: positive regulation of transcription from RNA polymerase II promoter in response to iron + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to iron' 'regulation of transcription from RNA polymerase II promoter in response to iron') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to iron' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0006366 label: transcription from RNA polymerase II promoter + SubClassOf('transcription from RNA polymerase II promoter' 'transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#SO_0000697 label: gene_with_stop_codon_read_through + SubClassOf('gene_with_stop_codon_read_through' 'gene_with_recoded_mRNA') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_118072 label: Coelacanthimorpha + SubClassOf('Coelacanthimorpha' 'Sarcopterygii') --- !New Class!: http://www.geneontology.org/go#GO_0006617 label: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition + SubClassOf('SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition' ObjectSomeValueFrom('part_of' 'SRP-dependent cotranslational protein targeting to membrane')) --- !New Class!: http://www.geneontology.org/go#GO_0000487 label: maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) + SubClassOf('maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)' 'maturation of 5.8S rRNA') --- !New Class!: http://www.geneontology.org/go#OMIT_0000300 label: GallBladder + SubClassOf('GallBladder' 'DigestiveOrgan') --- !New Class!: http://www.geneontology.org/go#OMIT_0000102 label: MuscleTissue + SubClassOf('MuscleTissue' 'AdultTissue') --- !New Class!: http://www.geneontology.org/go#GO_1900545 label: regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0000378 label: RNA exon ligation + SubClassOf('RNA exon ligation' ObjectSomeValueFrom('part_of' 'RNA splicing, via endonucleolytic cleavage and ligation')) --- !New Class!: http://www.geneontology.org/go#GO_0000390 label: spliceosomal complex disassembly + SubClassOf('spliceosomal complex disassembly' ObjectSomeValueFrom('part_of' 'mRNA splicing, via spliceosome')) --- !New Class!: http://www.geneontology.org/go#GO_0031047 label: gene silencing by RNA + SubClassOf('gene silencing by RNA' 'gene silencing') --- !New Class!: http://www.geneontology.org/go#GO_0002100 label: tRNA wobble adenosine to inosine editing + SubClassOf('tRNA wobble adenosine to inosine editing' 'tRNA wobble base modification') --- !New Class!: http://www.geneontology.org/go#GO_0035512 label: hydrolytic DNA demethylation + SubClassOf('hydrolytic DNA demethylation' 'DNA demethylation') --- !New Class!: http://www.geneontology.org/go#GO_0022024 label: BMP signaling pathway involved in forebrain neuron fate commitment + SubClassOf('BMP signaling pathway involved in forebrain neuron fate commitment' 'BMP signaling pathway') + SubClassOf('BMP signaling pathway involved in forebrain neuron fate commitment' 'regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment') + EquivalentClasses('BMP signaling pathway involved in forebrain neuron fate commitment' 'BMP signaling pathway' ) --- !New Class!: http://www.geneontology.org/go#GO_0044726 label: protection of DNA demethylation of female pronucleus + SubClassOf('protection of DNA demethylation of female pronucleus' ObjectSomeValueFrom('part_of' 'chromatin reprogramming in the zygote')) + SubClassOf('protection of DNA demethylation of female pronucleus' 'regulation of DNA methylation') --- !New Class!: http://www.geneontology.org/go#GO_0071952 label: conversion of O-phosphoseryl-tRNA to cysteinyl-tRNA + SubClassOf('conversion of O-phosphoseryl-tRNA to cysteinyl-tRNA' 'charged-tRNA amino acid modification') --- !New Class!: http://www.geneontology.org/go#OMIT_0000264 label: HepaticArtery + SubClassOf('HepaticArtery' 'Artery') --- !New Class!: http://www.geneontology.org/go#GO_0044073 label: modulation by symbiont of host translation + SubClassOf('modulation by symbiont of host translation' 'regulation of translation') --- !New Class!: http://www.geneontology.org/go#GO_0001186 label: RNA polymerase I transcription factor recruiting transcription factor activity + SubClassOf('RNA polymerase I transcription factor recruiting transcription factor activity' 'RNA polymerase I transcription factor binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0097222 label: mitochondrial mRNA polyadenylation + SubClassOf('mitochondrial mRNA polyadenylation' 'mRNA polyadenylation') --- !New Class!: http://www.geneontology.org/go#GO_0000353 label: formation of quadruple SL/U4/U5/U6 snRNP + SubClassOf('formation of quadruple SL/U4/U5/U6 snRNP' ObjectSomeValueFrom('part_of' 'mRNA trans splicing, SL addition')) --- !New Class!: http://www.geneontology.org/go#GO_0071039 label: nuclear polyadenylation-dependent CUT catabolic process + SubClassOf('nuclear polyadenylation-dependent CUT catabolic process' 'nuclear polyadenylation-dependent ncRNA catabolic process') --- !New Class!: http://www.geneontology.org/go#GO_0070900 label: mitochondrial tRNA modification + SubClassOf('mitochondrial tRNA modification' 'tRNA modification') + SubClassOf('mitochondrial tRNA modification' 'mitochondrial RNA processing') + EquivalentClasses('tRNA modification' 'mitochondrial tRNA modification' ) --- !New Class!: http://www.geneontology.org/go#SO_0000654 label: maxicircle_gene + SubClassOf('maxicircle_gene' 'kinetoplast_gene') --- !New Class!: http://www.geneontology.org/go#GO_1901309 label: negative regulation of sterol regulatory element binding protein cleavage + SubClassOf('negative regulation of sterol regulatory element binding protein cleavage' ObjectSomeValueFrom('negatively_regulates' 'sterol regulatory element binding protein cleavage')) + SubClassOf('negative regulation of sterol regulatory element binding protein cleavage' 'negative regulation of protein processing') + EquivalentClasses('negative regulation of sterol regulatory element binding protein cleavage' ObjectSomeValueFrom('negatively_regulates' 'sterol regulatory element binding protein cleavage') ) + SubClassOf('negative regulation of sterol regulatory element binding protein cleavage' 'regulation of sterol regulatory element binding protein cleavage') --- !New Class!: http://www.geneontology.org/go#GO_0032061 label: negative regulation of translation in response to osmotic stress + SubClassOf('negative regulation of translation in response to osmotic stress' 'regulation of translation in response to osmotic stress') + SubClassOf('negative regulation of translation in response to osmotic stress' 'negative regulation of translation in response to stress') --- !New Class!: http://www.geneontology.org/go#SO_0000185 label: primary_transcript + SubClassOf('primary_transcript' 'transcript') --- !New Class!: http://www.geneontology.org/go#OMIT_0000135 label: Parasiticlnfection + SubClassOf('Parasiticlnfection' 'Infection') --- !New Class!: http://www.geneontology.org/go#GO_0050434 label: positive regulation of viral transcription + SubClassOf('positive regulation of viral transcription' 'regulation of viral transcription') + EquivalentClasses('positive regulation of viral transcription' ObjectSomeValueFrom('positively_regulates' 'viral transcription') ) + SubClassOf('positive regulation of viral transcription' ObjectSomeValueFrom('positively_regulates' 'viral transcription')) --- !New Class!: http://www.geneontology.org/go#GO_0060260 label: regulation of transcription initiation from RNA polymerase II promoter + SubClassOf('regulation of transcription initiation from RNA polymerase II promoter' 'regulation of DNA-dependent transcription, initiation') + SubClassOf('regulation of transcription initiation from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription initiation from RNA polymerase II promoter') ) + SubClassOf('regulation of transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription initiation from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#SO_0000167 label: promoter + SubClassOf('promoter' 'transcriptional_cis_regulatory_region') --- !New Class!: http://www.geneontology.org/go#SO_0001058 label: promoter_targeting_sequence + SubClassOf('promoter_targeting_sequence' 'transcriptional_cis_regulatory_region') --- !New Class!: http://www.geneontology.org/go#GO_2000767 label: positive regulation of cytoplasmic translation + SubClassOf('positive regulation of cytoplasmic translation' 'regulation of cytoplasmic translation') + EquivalentClasses('positive regulation of cytoplasmic translation' ObjectSomeValueFrom('positively_regulates' 'cytoplasmic translation') ) + SubClassOf('positive regulation of cytoplasmic translation' 'positive regulation of translation') + SubClassOf('positive regulation of cytoplasmic translation' ObjectSomeValueFrom('positively_regulates' 'cytoplasmic translation')) --- !New Class!: http://www.geneontology.org/go#GO_0006422 label: aspartyl-tRNA aminoacylation + SubClassOf('aspartyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') + EquivalentClasses('aspartyl-tRNA aminoacylation' 'mitochondrial aspartyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0097481 label: neuronal postsynaptic density + SubClassOf('neuronal postsynaptic density' ObjectSomeValueFrom('part_of' 'dendritic spine head')) + SubClassOf('neuronal postsynaptic density' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0004880 label: juvenile hormone receptor activity + SubClassOf('juvenile hormone receptor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0039647 label: suppression by virus of host poly(A)-binding protein activity + SubClassOf('suppression by virus of host poly(A)-binding protein activity' 'suppression by virus of host translation') --- !New Class!: http://www.geneontology.org/go#GO_0071036 label: nuclear polyadenylation-dependent snoRNA catabolic process + SubClassOf('nuclear polyadenylation-dependent snoRNA catabolic process' 'nuclear polyadenylation-dependent ncRNA catabolic process') + SubClassOf('nuclear polyadenylation-dependent snoRNA catabolic process' ObjectSomeValueFrom('has_part' 'snoRNA polyadenylation')) --- !New Class!: http://www.geneontology.org/go#GO_0045916 label: negative regulation of complement activation + SubClassOf('negative regulation of complement activation' 'regulation of complement activation') + SubClassOf('negative regulation of complement activation' 'negative regulation of protein processing') --- !New Class!: http://www.geneontology.org/go#GO_0001212 label: zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription + SubClassOf('zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription' 'zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity') + SubClassOf('zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription' 'metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription') --- !New Class!: http://www.geneontology.org/go#GO_0016435 label: rRNA (guanine) methyltransferase activity + SubClassOf('rRNA (guanine) methyltransferase activity' 'rRNA methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0036260 label: RNA capping + SubClassOf('RNA capping' 'RNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0043630 label: ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process + SubClassOf('ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process' 'ncRNA polyadenylation') + EquivalentClasses('ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process' ObjectIntersectionOf('ncRNA polyadenylation' ObjectSomeValueFrom('part_of' 'polyadenylation-dependent ncRNA catabolic process')) ) + SubClassOf('ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process' ObjectSomeValueFrom('part_of' 'polyadenylation-dependent ncRNA catabolic process')) --- !New Class!: http://www.geneontology.org/go#GO_0070042 label: rRNA (uridine-N3-)-methyltransferase activity + SubClassOf('rRNA (uridine-N3-)-methyltransferase activity' 'rRNA (uridine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0033449 label: GUU codon-amino acid adaptor activity + SubClassOf('GUU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#SO_0000089 label: kinetoplast_gene + SubClassOf('kinetoplast_gene' 'mt_gene') --- !New Class!: http://www.geneontology.org/go#GO_1900365 label: positive regulation of mRNA polyadenylation + SubClassOf('positive regulation of mRNA polyadenylation' ObjectSomeValueFrom('positively_regulates' 'mRNA polyadenylation')) + SubClassOf('positive regulation of mRNA polyadenylation' 'regulation of mRNA polyadenylation') + EquivalentClasses('positive regulation of mRNA polyadenylation' ObjectSomeValueFrom('positively_regulates' 'mRNA polyadenylation') ) + SubClassOf('positive regulation of mRNA polyadenylation' 'positive regulation of mRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#GO_0001011 label: sequence-specific DNA binding RNA polymerase recruiting transcription factor activity + SubClassOf('sequence-specific DNA binding RNA polymerase recruiting transcription factor activity' 'sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000200 label: ExtranodaINKTCellLymphoma + SubClassOf('ExtranodaINKTCellLymphoma' 'MatureTOrNKCellNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0000966 label: RNA 5'-end processing + EquivalentClasses('mitochondrial RNA 5'-end processing' 'RNA 5'-end processing' ) + SubClassOf('RNA 5'-end processing' 'RNA processing') --- !New Class!: http://www.geneontology.org/go#snap_DependentContinuant label: dependent_continuant + SubClassOf('dependent_continuant' 'continuant') + EquivalentClasses('dependent_continuant' ObjectUnionOf('generically_dependent_continuant' 'specifically_dependent_continuant') ) + DisjointClasses('dependent_continuant' 'independent_continuant') + DisjointClasses('dependent_continuant' 'spatial_region') --- !New Class!: http://www.geneontology.org/go#OMIT_0000106 label: Bone + SubClassOf('Bone' 'ConnectiveTissue') --- !New Class!: http://www.geneontology.org/go#GO_0003155 label: BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry + EquivalentClasses('BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'BMP signaling pathway' ) + SubClassOf('BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry' 'BMP signaling pathway involved in determination of left/right symmetry') --- !New Class!: http://www.geneontology.org/go#SO_0000002 label: sequence_secondary_structure + SubClassOf('sequence_secondary_structure' 'biological_region') --- !New Class!: http://www.geneontology.org/go#OMIT_0000071 label: Basophils + SubClassOf('Basophils' 'Granulocyte') --- !New Class!: http://www.geneontology.org/go#GO_0043046 label: DNA methylation involved in gamete generation + SubClassOf('DNA methylation involved in gamete generation' 'DNA methylation') + EquivalentClasses('DNA methylation' 'DNA methylation involved in gamete generation' ) --- !New Class!: http://www.geneontology.org/go#GO_0070152 label: mitochondrial isoleucyl-tRNA aminoacylation + SubClassOf('mitochondrial isoleucyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') + SubClassOf('mitochondrial isoleucyl-tRNA aminoacylation' 'isoleucyl-tRNA aminoacylation') + EquivalentClasses('isoleucyl-tRNA aminoacylation' 'mitochondrial isoleucyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000289 label: InternalJugularVein + SubClassOf('InternalJugularVein' 'Vein') --- !New Class!: http://www.geneontology.org/go#SO_0001687 label: restriction_enzyme_recognition_site + SubClassOf('restriction_enzyme_recognition_site' 'biological_region') --- !New Class!: http://www.geneontology.org/go#OMIT_0000298 label: Duodenum + SubClassOf('Duodenum' 'DigestiveOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0090115 label: C-5 methylation on cytosine involved in chromatin silencing + SubClassOf('C-5 methylation on cytosine involved in chromatin silencing' 'C-5 methylation of cytosine') + SubClassOf('C-5 methylation on cytosine involved in chromatin silencing' ObjectSomeValueFrom('part_of' 'methylation-dependent chromatin silencing')) --- !New Class!: http://www.geneontology.org/go#GO_0033454 label: GCC codon-amino acid adaptor activity + SubClassOf('GCC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0001191 label: RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription + SubClassOf('RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription' ObjectSomeValueFrom('part_of' 'negative regulation of transcription from RNA polymerase II promoter')) + SubClassOf('RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription' 'RNA polymerase II transcription factor binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0051091 label: positive regulation of sequence-specific DNA binding transcription factor activity + SubClassOf('positive regulation of sequence-specific DNA binding transcription factor activity' 'regulation of sequence-specific DNA binding transcription factor activity') + EquivalentClasses('positive regulation of sequence-specific DNA binding transcription factor activity' ObjectSomeValueFrom('positively_regulates' 'sequence-specific DNA binding transcription factor activity') ) + SubClassOf('positive regulation of sequence-specific DNA binding transcription factor activity' ObjectSomeValueFrom('positively_regulates' 'sequence-specific DNA binding transcription factor activity')) --- !New Class!: http://www.geneontology.org/go#GO_0000289 label: nuclear-transcribed mRNA poly(A) tail shortening + SubClassOf('nuclear-transcribed mRNA poly(A) tail shortening' 'mRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#GO_0031167 label: rRNA methylation + SubClassOf('rRNA methylation' 'rRNA modification') --- !New Class!: http://www.geneontology.org/go#GO_1900406 label: regulation of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('regulation of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0071040 label: nuclear polyadenylation-dependent antisense transcript catabolic process + SubClassOf('nuclear polyadenylation-dependent antisense transcript catabolic process' 'nuclear polyadenylation-dependent ncRNA catabolic process') --- !New Class!: http://www.geneontology.org/go#GO_0035103 label: sterol regulatory element binding protein cleavage + SubClassOf('sterol regulatory element binding protein cleavage' 'protein processing') + SubClassOf('sterol regulatory element binding protein cleavage' ObjectSomeValueFrom('part_of' 'SREBP signaling pathway')) --- !New Class!: http://www.geneontology.org/go#SO_0000862 label: capped_mRNA + SubClassOf('capped_mRNA' 'mRNA') --- !New Class!: http://www.geneontology.org/go#SO_1001264 label: mRNA_recoded_by_translational_bypass + SubClassOf('mRNA_recoded_by_translational_bypass' 'recoded_mRNA') --- !New Class!: http://www.geneontology.org/go#GO_0044307 label: dendritic branch + SubClassOf('dendritic branch' ObjectSomeValueFrom('part_of' 'dendrite')) + SubClassOf('dendritic branch' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0050684 label: regulation of mRNA processing + EquivalentClasses('regulation of mRNA processing' ObjectSomeValueFrom('regulates' 'mRNA processing') ) + SubClassOf('regulation of mRNA processing' ObjectSomeValueFrom('regulates' 'mRNA processing')) + SubClassOf('regulation of mRNA processing' 'regulation of gene expression') --- !New Class!: http://www.geneontology.org/go#OMIT_0000145 label: VascularEctasias + SubClassOf('VascularEctasias' 'HamartomaOrMalformation') --- !New Class!: http://www.geneontology.org/go#GO_0044638 label: envenomation resulting in positive regulation of complement activation, classical pathway in other organism + SubClassOf('envenomation resulting in positive regulation of complement activation, classical pathway in other organism' 'envenomation resulting in modulation of complement activation, classical pathway in other organism') + SubClassOf('envenomation resulting in positive regulation of complement activation, classical pathway in other organism' ObjectSomeValueFrom('has_part' 'positive regulation of complement activation, classical pathway in other organism')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000361 label: DuctusDeferens + SubClassOf('DuctusDeferens' 'MaleReproductiveSystem') --- !New Class!: http://www.geneontology.org/go#GO_2000766 label: negative regulation of cytoplasmic translation + EquivalentClasses('negative regulation of cytoplasmic translation' ObjectSomeValueFrom('negatively_regulates' 'cytoplasmic translation') ) + SubClassOf('negative regulation of cytoplasmic translation' 'regulation of cytoplasmic translation') + SubClassOf('negative regulation of cytoplasmic translation' ObjectSomeValueFrom('negatively_regulates' 'cytoplasmic translation')) + SubClassOf('negative regulation of cytoplasmic translation' 'negative regulation of translation') --- !New Class!: http://www.geneontology.org/go#GO_2000636 label: positive regulation of primary miRNA processing + SubClassOf('positive regulation of primary miRNA processing' ObjectSomeValueFrom('positively_regulates' 'primary miRNA processing')) + EquivalentClasses('positive regulation of primary miRNA processing' ObjectSomeValueFrom('positively_regulates' 'primary miRNA processing') ) + SubClassOf('positive regulation of primary miRNA processing' 'regulation of primary miRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0070149 label: mitochondrial glutamyl-tRNA aminoacylation + SubClassOf('mitochondrial glutamyl-tRNA aminoacylation' 'glutamyl-tRNA aminoacylation') + EquivalentClasses('glutamyl-tRNA aminoacylation' 'mitochondrial glutamyl-tRNA aminoacylation' ) + SubClassOf('mitochondrial glutamyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') --- !New Class!: http://www.geneontology.org/go#SO_0000896 label: translationally_regulated_gene + SubClassOf('translationally_regulated_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0001227 label: RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription + SubClassOf('RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' 'sequence-specific DNA binding RNA polymerase II transcription factor activity') + SubClassOf('RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' ObjectSomeValueFrom('part_of' 'negative regulation of transcription from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_10197 label: Ctenophora + SubClassOf('Ctenophora' 'Eumetazoa') --- !New Class!: http://www.geneontology.org/go#GO_0004482 label: mRNA (guanine-N7-)-methyltransferase activity + SubClassOf('mRNA (guanine-N7-)-methyltransferase activity' ObjectSomeValueFrom('part_of' 'RNA (guanine-N7)-methylation')) + SubClassOf('mRNA (guanine-N7-)-methyltransferase activity' ObjectSomeValueFrom('part_of' '7-methylguanosine mRNA capping')) --- !New Class!: http://www.geneontology.org/go#GO_0002938 label: tRNA guanine ribose methylation + SubClassOf('tRNA guanine ribose methylation' 'tRNA nucleoside ribose methylation') --- !New Class!: http://www.geneontology.org/go#SO_0001270 label: stRNA_gene + SubClassOf('stRNA_gene' 'ncRNA_gene') --- !New Class!: http://www.geneontology.org/go#GO_0010964 label: regulation of chromatin silencing by small RNA + SubClassOf('regulation of chromatin silencing by small RNA' 'regulation of gene silencing by RNA') + SubClassOf('regulation of chromatin silencing by small RNA' ObjectSomeValueFrom('regulates' 'chromatin silencing by small RNA')) + SubClassOf('regulation of chromatin silencing by small RNA' 'regulation of chromatin silencing') + EquivalentClasses('regulation of chromatin silencing by small RNA' ObjectSomeValueFrom('regulates' 'chromatin silencing by small RNA') ) --- !New Class!: http://www.geneontology.org/go#GO_0030422 label: production of siRNA involved in RNA interference + SubClassOf('production of siRNA involved in RNA interference' 'production of small RNA involved in gene silencing by RNA') + SubClassOf('production of siRNA involved in RNA interference' ObjectSomeValueFrom('part_of' 'RNA interference')) --- !New Class!: http://www.geneontology.org/go#GO_2000531 label: regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000359 label: Endometrium + SubClassOf('Endometrium' 'Uterus') --- !New Class!: http://www.geneontology.org/go#SO_0000897 label: allelically_excluded_gene + SubClassOf('allelically_excluded_gene' 'epigenetically_modified_gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000232 label: AntihypertensiveTreatment + SubClassOf('AntihypertensiveTreatment' 'PharmaceuticalTreatment') --- !New Class!: http://www.geneontology.org/go#GO_0001868 label: regulation of complement activation, lectin pathway + SubClassOf('regulation of complement activation, lectin pathway' 'regulation of complement activation') --- !New Class!: http://www.geneontology.org/go#GO_0033409 label: UAU codon-amino acid adaptor activity + SubClassOf('UAU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0002129 label: wobble position guanine ribose methylation + SubClassOf('wobble position guanine ribose methylation' 'tRNA guanine ribose methylation') + SubClassOf('wobble position guanine ribose methylation' 'wobble position ribose methylation') --- !New Class!: http://www.geneontology.org/go#GO_0070039 label: rRNA (guanosine-2'-O-)-methyltransferase activity + SubClassOf('rRNA (guanosine-2'-O-)-methyltransferase activity' ObjectSomeValueFrom('part_of' 'rRNA 2'-O-methylation')) + SubClassOf('rRNA (guanosine-2'-O-)-methyltransferase activity' 'rRNA (guanine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_66780 label: Gnathostomulida + SubClassOf('Gnathostomulida' 'Bilateria') --- !New Class!: http://www.geneontology.org/go#GO_0033436 label: AUG codon-amino acid adaptor activity + SubClassOf('AUG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000333 label: Bones + SubClassOf('Bones' 'MusculoskeletalOrgan') --- !New Class!: http://www.geneontology.org/go#GO_0034959 label: endothelin maturation + SubClassOf('endothelin maturation' 'peptide hormone processing') --- !New Class!: http://www.geneontology.org/go#GO_0031070 label: intronic snoRNA processing + SubClassOf('intronic snoRNA processing' 'snoRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_1900621 label: regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling + EquivalentClasses('regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling' ObjectSomeValueFrom('results_in' 'regulation of transcription from RNA polymerase II promoter') ) + SubClassOf('regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling' ObjectSomeValueFrom('results_in' 'regulation of transcription from RNA polymerase II promoter')) + SubClassOf('regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0035959 label: positive regulation of glyoxylate cycle by positive regulation of transcription from RNA polymerase II promoter + EquivalentClasses('positive regulation of glyoxylate cycle by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) + SubClassOf('positive regulation of glyoxylate cycle by positive regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of glyoxylate cycle by positive regulation of transcription from RNA polymerase II promoter' 'regulation of glyoxylate cycle by regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0090124 label: N-4 methylation of cytosine + SubClassOf('N-4 methylation of cytosine' 'DNA methylation on cytosine') --- !New Class!: http://www.geneontology.org/go#GO_0035105 label: sterol regulatory element binding protein import into nucleus + SubClassOf('sterol regulatory element binding protein import into nucleus' ObjectSomeValueFrom('part_of' 'SREBP signaling pathway')) --- !New Class!: http://www.geneontology.org/go#GO_0070930 label: trans-translation-dependent protein tagging + SubClassOf('trans-translation-dependent protein tagging' ObjectSomeValueFrom('has_part' 'trans-translation')) --- !New Class!: http://www.geneontology.org/go#GO_0045990 label: carbon catabolite regulation of transcription + SubClassOf('carbon catabolite regulation of transcription' 'regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0071076 label: RNA 3' uridylation + SubClassOf('RNA 3' uridylation' 'RNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#GO_0060212 label: negative regulation of nuclear-transcribed mRNA poly(A) tail shortening + SubClassOf('negative regulation of nuclear-transcribed mRNA poly(A) tail shortening' ObjectSomeValueFrom('negatively_regulates' 'nuclear-transcribed mRNA poly(A) tail shortening')) + EquivalentClasses('negative regulation of nuclear-transcribed mRNA poly(A) tail shortening' ObjectSomeValueFrom('negatively_regulates' 'nuclear-transcribed mRNA poly(A) tail shortening') ) + SubClassOf('negative regulation of nuclear-transcribed mRNA poly(A) tail shortening' 'regulation of nuclear-transcribed mRNA poly(A) tail shortening') + SubClassOf('negative regulation of nuclear-transcribed mRNA poly(A) tail shortening' 'negative regulation of mRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000190 label: BurkittLymphoma + SubClassOf('BurkittLymphoma' 'MatureBCellNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0090293 label: nitrogen catabolite regulation of transcription + SubClassOf('nitrogen catabolite regulation of transcription' 'regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0001168 label: RNA polymerase I upstream control element sequence-specific DNA binding transcription factor activity + SubClassOf('RNA polymerase I upstream control element sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding RNA polymerase I transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0006386 label: termination of RNA polymerase III transcription + SubClassOf('termination of RNA polymerase III transcription' 'DNA-dependent transcription, termination') + SubClassOf('termination of RNA polymerase III transcription' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000148 label: LeukemiaAndLymphoma + SubClassOf('LeukemiaAndLymphoma' 'Tumor') --- !New Class!: http://www.geneontology.org/go#GO_0035280 label: miRNA loading onto RISC involved in gene silencing by miRNA + SubClassOf('miRNA loading onto RISC involved in gene silencing by miRNA' ObjectSomeValueFrom('part_of' 'gene silencing by miRNA')) + SubClassOf('miRNA loading onto RISC involved in gene silencing by miRNA' 'small RNA loading onto RISC') --- !New Class!: http://www.geneontology.org/go#GO_0001056 label: RNA polymerase III activity + SubClassOf('RNA polymerase III activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter')) + EquivalentClasses('RNA polymerase III activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter') ) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_66288 label: Oxymonadida + SubClassOf('Oxymonadida' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#GO_0045947 label: negative regulation of translational initiation + SubClassOf('negative regulation of translational initiation' 'regulation of translational initiation') + SubClassOf('negative regulation of translational initiation' ObjectSomeValueFrom('negatively_regulates' 'translational initiation')) + SubClassOf('negative regulation of translational initiation' 'negative regulation of translation') + EquivalentClasses('negative regulation of translational initiation' ObjectSomeValueFrom('negatively_regulates' 'translational initiation') ) --- !New Class!: http://www.geneontology.org/go#GO_0036208 label: negative regulation of histone gene expression + SubClassOf('negative regulation of histone gene expression' 'regulation of histone gene expression') + SubClassOf('negative regulation of histone gene expression' 'negative regulation of gene expression') --- !New Class!: http://www.geneontology.org/go#OMIT_0000260 label: AxillaryArtery + SubClassOf('AxillaryArtery' 'Artery') --- !New Class!: http://www.geneontology.org/go#OMIT_0000274 label: DescendingAorta + SubClassOf('DescendingAorta' 'Aorta') --- !New Class!: http://www.geneontology.org/go#OMIT_0000217 label: PulmonarySquamousCellCarcinoma + SubClassOf('PulmonarySquamousCellCarcinoma' 'Carcinoma') --- !New Class!: http://www.geneontology.org/go#OMIT_0000204 label: Sarcoma + SubClassOf('Sarcoma' 'MalignantNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0043618 label: regulation of transcription from RNA polymerase II promoter in response to stress + SubClassOf('regulation of transcription from RNA polymerase II promoter in response to stress' 'regulation of transcription from RNA polymerase II promoter') + SubClassOf('regulation of transcription from RNA polymerase II promoter in response to stress' 'regulation of DNA-dependent transcription in response to stress') --- !New Class!: http://www.geneontology.org/go#MOD_01187 label: L-pyrrolysine residue + SubClassOf('L-pyrrolysine residue' 'pre-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_0007363 label: positive regulation of terminal gap gene transcription + SubClassOf('positive regulation of terminal gap gene transcription' 'regulation of transcription involved in anterior/posterior axis specification') + SubClassOf('positive regulation of terminal gap gene transcription' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0001210 label: metal ion regulated sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription + SubClassOf('metal ion regulated sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' ObjectSomeValueFrom('part_of' 'negative regulation of transcription, DNA-dependent')) + SubClassOf('metal ion regulated sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription' 'metal ion regulated sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_10226 label: Placozoa + SubClassOf('Placozoa' 'Metazoa') --- !New Class!: http://www.geneontology.org/go#GO_1900526 label: negative regulation of phosphatidylserine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of phosphatidylserine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('negative regulation of phosphatidylserine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#SO_0000336 label: pseudogene + SubClassOf('pseudogene' 'biological_region') + SubClassOf('pseudogene' ObjectSomeValueFrom('non_functional_homolog_of' 'gene')) --- !New Class!: http://www.geneontology.org/go#GO_0007250 label: activation of NF-kappaB-inducing kinase activity + SubClassOf('activation of NF-kappaB-inducing kinase activity' 'regulation of NIK/NF-kappaB cascade') + SubClassOf('activation of NF-kappaB-inducing kinase activity' ObjectSomeValueFrom('positively_regulates' 'NF-kappaB-inducing kinase activity')) + SubClassOf('activation of NF-kappaB-inducing kinase activity' ObjectSomeValueFrom('part_of' 'NIK/NF-kappaB cascade')) + EquivalentClasses('activation of NF-kappaB-inducing kinase activity' ObjectSomeValueFrom('positively_regulates' 'NF-kappaB-inducing kinase activity') ) --- !New Class!: http://www.geneontology.org/go#GO_0001680 label: tRNA 3'-terminal CCA addition + SubClassOf('tRNA 3'-terminal CCA addition' 'tRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#GO_1901489 label: positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process in response to decreased oxygen levels + SubClassOf('positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process in response to decreased oxygen levels' 'positive regulation of SREBP signaling pathway in response to decreased oxygen levels') + SubClassOf('positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process in response to decreased oxygen levels' 'positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process') + EquivalentClasses('positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process in response to decreased oxygen levels' ObjectSomeValueFrom('results_in' 'positive regulation of SREBP signaling pathway in response to decreased oxygen levels') ) --- !New Class!: http://www.geneontology.org/go#GO_0061175 label: type II terminal bouton + SubClassOf('type II terminal bouton' 'terminal bouton') --- !New Class!: http://www.geneontology.org/go#GO_0090116 label: C-5 methylation of cytosine + SubClassOf('C-5 methylation of cytosine' 'DNA methylation on cytosine') --- !New Class!: http://www.geneontology.org/go#OMIT_0000482 label: Archaea + SubClassOf('Archaea' 'CellularOrganism') --- !New Class!: http://www.geneontology.org/go#OMIT_0000268 label: SplenicArtery + SubClassOf('SplenicArtery' 'Artery') --- !New Class!: http://www.geneontology.org/go#SO_0000727 label: CRM + SubClassOf('CRM' 'transcriptional_cis_regulatory_region') --- !New Class!: http://www.geneontology.org/go#GO_0010690 label: negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to stress + SubClassOf('negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to stress' 'negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0001135 label: RNA polymerase II transcription factor recruiting transcription factor activity + SubClassOf('RNA polymerase II transcription factor recruiting transcription factor activity' 'RNA polymerase II transcription factor binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#SO_0000673 label: transcript + SubClassOf('transcript' 'gene_member_region') --- !New Class!: http://www.geneontology.org/go#OMIT_0000159 label: PrimaryCardiacMyxoma + SubClassOf('PrimaryCardiacMyxoma' 'ConnectiveOrigin') --- !New Class!: http://www.geneontology.org/go#OMIT_0000033 label: HighTemperature + SubClassOf('HighTemperature' 'Temperature') --- !New Class!: http://www.geneontology.org/go#GO_0061401 label: positive regulation of transcription from RNA polymerase II promoter in response to a hypotonic environment + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to a hypotonic environment' 'positive regulation of transcription from RNA polymerase II promoter in response to osmotic stress') --- !New Class!: http://www.geneontology.org/go#GO_0007228 label: positive regulation of hh target transcription factor activity + SubClassOf('positive regulation of hh target transcription factor activity' 'positive regulation of sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0045975 label: positive regulation of translation, ncRNA-mediated + SubClassOf('positive regulation of translation, ncRNA-mediated' 'positive regulation of translation') + SubClassOf('positive regulation of translation, ncRNA-mediated' 'regulation of translation, ncRNA-mediated') --- !New Class!: http://www.geneontology.org/go#GO_0060964 label: regulation of gene silencing by miRNA + EquivalentClasses('regulation of gene silencing by miRNA' ObjectSomeValueFrom('regulates' 'gene silencing by miRNA') ) + SubClassOf('regulation of gene silencing by miRNA' ObjectSomeValueFrom('regulates' 'gene silencing by miRNA')) + SubClassOf('regulation of gene silencing by miRNA' 'regulation of posttranscriptional gene silencing') + SubClassOf('regulation of gene silencing by miRNA' 'regulation of gene silencing by RNA') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_5719 label: Parabasalidea + SubClassOf('Parabasalidea' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#GO_0016485 label: protein processing + SubClassOf('protein processing' 'protein maturation') + EquivalentClasses('vacuolar protein processing' 'protein processing' ) + EquivalentClasses('protein processing involved in protein targeting to mitochondrion' 'protein processing' ) + EquivalentClasses('protein processing' 'protein processing in phagocytic vesicle' ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000283 label: PulmonaryValve + SubClassOf('PulmonaryValve' 'Valves') --- !New Class!: http://www.geneontology.org/go#GO_0001041 label: transcription from a RNA polymerase III hybrid type promoter + SubClassOf('transcription from a RNA polymerase III hybrid type promoter' 'transcription from RNA polymerase III promoter') --- !New Class!: http://www.geneontology.org/go#GO_0043556 label: regulation of translation in response to oxidative stress + SubClassOf('regulation of translation in response to oxidative stress' 'regulation of translation in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0043907 label: Cys-tRNA(Pro) hydrolase activity + SubClassOf('Cys-tRNA(Pro) hydrolase activity' 'aminoacyl-tRNA editing activity') --- !New Class!: http://www.geneontology.org/go#GO_0001062 label: plastid PEP-A RNA polymerase activity + SubClassOf('plastid PEP-A RNA polymerase activity' ObjectSomeValueFrom('part_of' 'transcription from plastid promoter')) + SubClassOf('plastid PEP-A RNA polymerase activity' 'bacterial-type RNA polymerase activity') --- !New Class!: http://www.geneontology.org/go#GO_0090294 label: nitrogen catabolite activation of transcription + SubClassOf('nitrogen catabolite activation of transcription' 'nitrogen catabolite regulation of transcription') + SubClassOf('nitrogen catabolite activation of transcription' 'positive regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0032057 label: negative regulation of translational initiation in response to stress + SubClassOf('negative regulation of translational initiation in response to stress' 'negative regulation of translational initiation') + SubClassOf('negative regulation of translational initiation in response to stress' 'negative regulation of translation in response to stress') + SubClassOf('negative regulation of translational initiation in response to stress' 'regulation of translational initiation in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0000393 label: spliceosomal conformational changes to generate catalytic conformation + SubClassOf('spliceosomal conformational changes to generate catalytic conformation' ObjectSomeValueFrom('part_of' 'mRNA splicing, via spliceosome')) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_2763 label: Rhodophyta + SubClassOf('Rhodophyta' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_33317 label: Protostomia + SubClassOf('Protostomia' 'Bilateria') --- !New Class!: http://www.geneontology.org/go#GO_1902353 label: positive regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones + SubClassOf('positive regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones' 'negative regulation of transcription from RNA polymerase II promoter by pheromones') + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter by pheromones' 'positive regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones' ) --- !New Class!: http://www.geneontology.org/go#GO_0061149 label: BMP signaling pathway involved in ureter morphogenesis + EquivalentClasses('BMP signaling pathway' 'BMP signaling pathway involved in ureter morphogenesis' ) + SubClassOf('BMP signaling pathway involved in ureter morphogenesis' 'BMP signaling pathway') --- !New Class!: http://www.geneontology.org/go#GO_0006349 label: regulation of gene expression by genetic imprinting + EquivalentClasses('regulation of gene expression by genetic imprinting' ObjectSomeValueFrom('results_in' 'regulation of gene expression') ) + SubClassOf('regulation of gene expression by genetic imprinting' 'regulation of gene expression, epigenetic') --- !New Class!: http://www.geneontology.org/go#GO_0061475 label: cytosolic valyl-tRNA aminoacylation + SubClassOf('cytosolic valyl-tRNA aminoacylation' 'valyl-tRNA aminoacylation') + EquivalentClasses('valyl-tRNA aminoacylation' 'cytosolic valyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000060 label: Leukocyte + SubClassOf('Leukocyte' 'ConnectiveTissueCell') --- !New Class!: http://www.geneontology.org/go#GO_0033407 label: UCA codon-amino acid adaptor activity + SubClassOf('UCA codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#SO_0000376 label: RNA_6S + SubClassOf('RNA_6S' 'small_regulatory_ncRNA') --- !New Class!: http://www.geneontology.org/go#GO_0036307 label: 23S rRNA (adenine(2030)-N(6))-methyltransferase activity + SubClassOf('23S rRNA (adenine(2030)-N(6))-methyltransferase activity' 'rRNA (adenine-N6-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0010678 label: negative regulation of cellular carbohydrate metabolic process by negative regulation of transcription, DNA-dependent + EquivalentClasses('negative regulation of cellular carbohydrate metabolic process by negative regulation of transcription, DNA-dependent' ObjectSomeValueFrom('negatively_regulates' 'transcription, DNA-dependent') ) + SubClassOf('negative regulation of cellular carbohydrate metabolic process by negative regulation of transcription, DNA-dependent' 'negative regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0000398 label: mRNA splicing, via spliceosome + SubClassOf('mRNA splicing, via spliceosome' 'RNA splicing, via transesterification reactions with bulged adenosine as nucleophile') + SubClassOf('mRNA splicing, via spliceosome' 'mRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0070144 label: mitochondrial arginyl-tRNA aminoacylation + EquivalentClasses('arginyl-tRNA aminoacylation' 'mitochondrial arginyl-tRNA aminoacylation' ) + SubClassOf('mitochondrial arginyl-tRNA aminoacylation' 'arginyl-tRNA aminoacylation') + SubClassOf('mitochondrial arginyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') --- !New Class!: http://www.geneontology.org/go#GO_0000447 label: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) + SubClassOf('endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)') + SubClassOf('endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) + SubClassOf('endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) --- !New Class!: http://www.geneontology.org/go#GO_2000815 label: regulation of mRNA stability involved in response to oxidative stress + SubClassOf('regulation of mRNA stability involved in response to oxidative stress' 'regulation of mRNA stability involved in response to stress') + EquivalentClasses('regulation of mRNA stability' 'regulation of mRNA stability involved in response to oxidative stress' ) --- !New Class!: http://www.geneontology.org/go#GO_0061425 label: positive regulation of ethanol catabolic process by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of ethanol catabolic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of ethanol catabolic process by positive regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_2000976 label: regulation of transcription from RNA polymerase II promoter involved in detection of glucose + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in detection of glucose' ) + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in detection of glucose' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0035948 label: positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter' 'regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_0036316 label: SREBP-SCAP complex retention in endoplasmic reticulum + SubClassOf('SREBP-SCAP complex retention in endoplasmic reticulum' 'negative regulation of SREBP signaling pathway') --- !New Class!: http://www.geneontology.org/go#GO_0097381 label: photoreceptor disc membrane + SubClassOf('photoreceptor disc membrane' ObjectSomeValueFrom('part_of' 'photoreceptor outer segment')) + SubClassOf('photoreceptor disc membrane' 'neuron part') --- !New Class!: http://www.geneontology.org/go#span_SpatiotemporalInstant label: spatiotemporal_instant + SubClassOf('spatiotemporal_instant' 'connected_spatiotemporal_region') + DisjointClasses('spatiotemporal_instant' 'spatiotemporal_interval') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_33682 label: Euglenozoa + SubClassOf('Euglenozoa' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#GO_0033442 label: AAC codon-amino acid adaptor activity + SubClassOf('AAC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000079 label: EpendymalCell + SubClassOf('EpendymalCell' 'MacroglialCell') --- !New Class!: http://www.geneontology.org/go#GO_0010239 label: chloroplast mRNA processing + SubClassOf('chloroplast mRNA processing' 'mRNA processing') + SubClassOf('chloroplast mRNA processing' 'chloroplast RNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0007532 label: regulation of mating-type specific transcription, DNA-dependent + SubClassOf('regulation of mating-type specific transcription, DNA-dependent' 'regulation of transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0070922 label: small RNA loading onto RISC + SubClassOf('small RNA loading onto RISC' ObjectSomeValueFrom('part_of' 'gene silencing by RNA')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000153 label: NervousOrigin + SubClassOf('NervousOrigin' 'BenignNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0034414 label: tRNA 3'-trailer cleavage, endonucleolytic + EquivalentClasses('tRNA 3'-trailer cleavage, endonucleolytic' 'mitochondrial tRNA 3'-trailer cleavage, endonucleolytic' ) + SubClassOf('tRNA 3'-trailer cleavage, endonucleolytic' 'tRNA 3'-trailer cleavage') + EquivalentClasses('tRNA 3'-trailer cleavage, endonucleolytic' 'nuclear tRNA 3'-trailer cleavage, endonucleolytic' ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000082 label: SatelliteCell + SubClassOf('SatelliteCell' 'MacroglialCell') --- !New Class!: http://www.geneontology.org/go#SO_0000091 label: apicoplast_gene + SubClassOf('apicoplast_gene' 'plastid_gene') --- !New Class!: http://www.geneontology.org/go#GO_0017082 label: mineralocorticoid receptor activity + SubClassOf('mineralocorticoid receptor activity' 'ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0004879 label: ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity + SubClassOf('ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity' 'sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0007071 label: negative regulation of transcription from RNA polymerase III promoter during mitosis + SubClassOf('negative regulation of transcription from RNA polymerase III promoter during mitosis' 'regulation of transcription from RNA polymerase III promoter, mitotic') + SubClassOf('negative regulation of transcription from RNA polymerase III promoter during mitosis' 'negative regulation of transcription from RNA polymerase III promoter') + SubClassOf('negative regulation of transcription from RNA polymerase III promoter during mitosis' 'negative regulation of transcription during mitosis') --- !New Class!: http://www.geneontology.org/go#OMIT_0000284 label: TricuspidValve + SubClassOf('TricuspidValve' 'Valves') --- !New Class!: http://www.geneontology.org/go#GO_0000372 label: Group I intron splicing + SubClassOf('Group I intron splicing' 'RNA splicing, via transesterification reactions with guanosine as nucleophile') --- !New Class!: http://www.geneontology.org/go#OMIT_0000189 label: PrecursorTCellAcuteLymphoblasticLeukemiaLymphoma + SubClassOf('PrecursorTCellAcuteLymphoblasticLeukemiaLymphoma' 'ImmatureBOrTCellNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0007075 label: positive regulation of transcription on exit from mitosis, from RNA polymerase III promoter + SubClassOf('positive regulation of transcription on exit from mitosis, from RNA polymerase III promoter' 'positive regulation of transcription on exit from mitosis') --- !New Class!: http://www.geneontology.org/go#GO_0002939 label: tRNA N1-guanine methylation + SubClassOf('tRNA N1-guanine methylation' 'tRNA methylation') --- !New Class!: http://www.geneontology.org/go#GO_0002188 label: translation reinitiation + SubClassOf('translation reinitiation' 'cytoplasmic translational initiation') --- !New Class!: http://www.geneontology.org/go#GO_0045871 label: negative regulation of rhodopsin gene expression + SubClassOf('negative regulation of rhodopsin gene expression' 'negative regulation of gene expression') + SubClassOf('negative regulation of rhodopsin gene expression' 'regulation of rhodopsin gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0048786 label: presynaptic active zone + SubClassOf('presynaptic active zone' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0000117 label: regulation of transcription involved in G2/M transition of mitotic cell cycle + EquivalentClasses('regulation of transcription involved in G2/M transition of mitotic cell cycle' 'regulation of transcription, DNA-dependent' ) + SubClassOf('regulation of transcription involved in G2/M transition of mitotic cell cycle' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0001007 label: RNA polymerase III transcription factor binding transcription factor activity + SubClassOf('RNA polymerase III transcription factor binding transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III promoter')) + SubClassOf('RNA polymerase III transcription factor binding transcription factor activity' ObjectSomeValueFrom('part_of' 'regulation of transcription from RNA polymerase III promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0007329 label: positive regulation of transcription from RNA polymerase II promoter by pheromones + SubClassOf('positive regulation of transcription from RNA polymerase II promoter by pheromones' 'positive regulation of transcription by pheromones') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter by pheromones' 'regulation of transcription from RNA polymerase II promoter by pheromones') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter by pheromones' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0033408 label: UCG codon-amino acid adaptor activity + SubClassOf('UCG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_1990180 label: mitochondrial tRNA 3'-end processing + SubClassOf('mitochondrial tRNA 3'-end processing' 'mitochondrial RNA 3'-end processing') + SubClassOf('mitochondrial tRNA 3'-end processing' 'tRNA 3'-end processing') + EquivalentClasses('tRNA 3'-end processing' 'mitochondrial tRNA 3'-end processing' ) --- !New Class!: http://www.geneontology.org/go#GO_0006355 label: regulation of transcription, DNA-dependent + SubClassOf('regulation of transcription, DNA-dependent' 'regulation of gene expression') + EquivalentClasses('regulation of transcription involved in G2/M transition of mitotic cell cycle' 'regulation of transcription, DNA-dependent' ) + EquivalentClasses('regulation of transcription, DNA-dependent' 'regulation of transcription involved in anterior/posterior axis specification' ) + EquivalentClasses('regulation of transcription, DNA-dependent' 'regulation of transcription during meiosis' ) + SubClassOf('regulation of transcription, DNA-dependent' ObjectSomeValueFrom('regulates' 'transcription, DNA-dependent')) + EquivalentClasses('regulation of transcription, DNA-dependent' ObjectSomeValueFrom('regulates' 'transcription, DNA-dependent') ) + EquivalentClasses('regulation of transcription, DNA-dependent' 'regulation of transcription during mitosis' ) --- !New Class!: http://www.geneontology.org/go#GO_0001218 label: metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription + SubClassOf('metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription' 'metal ion regulated sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription') + SubClassOf('metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription' 'metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0033432 label: CGG codon-amino acid adaptor activity + SubClassOf('CGG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0070054 label: mRNA splicing, via endonucleolytic cleavage and ligation + SubClassOf('mRNA splicing, via endonucleolytic cleavage and ligation' 'RNA splicing, via endonucleolytic cleavage and ligation') + SubClassOf('mRNA splicing, via endonucleolytic cleavage and ligation' 'mRNA processing') --- !New Class!: http://www.geneontology.org/go#OMIT_0000358 label: Vagina + SubClassOf('Vagina' 'FemaleReproductiveSystem') --- !New Class!: http://www.geneontology.org/go#GO_0032786 label: positive regulation of DNA-dependent transcription, elongation + SubClassOf('positive regulation of DNA-dependent transcription, elongation' ObjectSomeValueFrom('positively_regulates' 'DNA-dependent transcription, elongation')) + EquivalentClasses('positive regulation of DNA-dependent transcription, elongation' ObjectSomeValueFrom('positively_regulates' 'DNA-dependent transcription, elongation') ) + SubClassOf('positive regulation of DNA-dependent transcription, elongation' 'regulation of DNA-dependent transcription, elongation') --- !New Class!: http://www.geneontology.org/go#GO_0060963 label: positive regulation of ribosomal protein gene transcription from RNA polymerase II promoter + SubClassOf('positive regulation of ribosomal protein gene transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of ribosomal protein gene transcription from RNA polymerase II promoter' 'regulation of ribosomal protein gene transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_8292 label: Amphibia + SubClassOf('Amphibia' 'Tetrapoda') --- !New Class!: http://www.geneontology.org/go#GO_2000637 label: positive regulation of gene silencing by miRNA + SubClassOf('positive regulation of gene silencing by miRNA' 'positive regulation of posttranscriptional gene silencing') + SubClassOf('positive regulation of gene silencing by miRNA' ObjectSomeValueFrom('positively_regulates' 'gene silencing by miRNA')) + EquivalentClasses('positive regulation of gene silencing by miRNA' ObjectSomeValueFrom('positively_regulates' 'gene silencing by miRNA') ) + SubClassOf('positive regulation of gene silencing by miRNA' 'regulation of gene silencing by miRNA') --- !New Class!: http://www.geneontology.org/go#SO_0001720 label: epigenetically_modified_region + SubClassOf('epigenetically_modified_region' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0032589 label: neuron projection membrane + SubClassOf('neuron projection membrane' ObjectSomeValueFrom('part_of' 'neuron projection')) + SubClassOf('neuron projection membrane' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0001213 label: metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription + SubClassOf('metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription' 'RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription') + SubClassOf('metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription' 'metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_117565 label: Hyperotreti + SubClassOf('Hyperotreti' 'Craniata') --- !New Class!: http://www.geneontology.org/go#GO_0001204 label: metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity + SubClassOf('metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity' 'sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity') + SubClassOf('metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity' 'metal ion regulated sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0043195 label: terminal bouton + SubClassOf('terminal bouton' 'axon part') + SubClassOf('terminal bouton' ObjectSomeValueFrom('part_of' 'axon terminus')) --- !New Class!: http://www.geneontology.org/go#GO_0001075 label: RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly + SubClassOf('RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly' 'RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity') + SubClassOf('RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'RNA polymerase II transcriptional preinitiation complex assembly')) --- !New Class!: http://www.geneontology.org/go#GO_0033268 label: node of Ranvier + SubClassOf('node of Ranvier' 'axon part') + SubClassOf('node of Ranvier' ObjectSomeValueFrom('part_of' 'main axon')) --- !New Class!: http://www.geneontology.org/go#GO_0039558 label: suppression by virus of host IRF7 activity by positive regulation of IRF7 sumoylation + SubClassOf('suppression by virus of host IRF7 activity by positive regulation of IRF7 sumoylation' 'suppression by virus of host IRF7 activity') --- !New Class!: http://www.geneontology.org/go#GO_0043557 label: regulation of translation in response to osmotic stress + SubClassOf('regulation of translation in response to osmotic stress' 'regulation of translation in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0033457 label: GAU codon-amino acid adaptor activity + SubClassOf('GAU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0039608 label: suppression by virus of host translation initiation factor activity by induction of host protein dephosphorylation + SubClassOf('suppression by virus of host translation initiation factor activity by induction of host protein dephosphorylation' 'suppression by virus of host translation initiation factor activity') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_9605 label: Homo + SubClassOf('Homo' 'Homininae') --- !New Class!: http://www.geneontology.org/go#GO_0044305 label: calyx of Held + SubClassOf('calyx of Held' 'axon terminus') --- !New Class!: http://www.geneontology.org/go#OMIT_0000345 label: AutonomicNervousSystem + SubClassOf('AutonomicNervousSystem' 'PeripheralNervousSystem') --- !New Class!: http://www.geneontology.org/go#GO_0035278 label: negative regulation of translation involved in gene silencing by miRNA + SubClassOf('negative regulation of translation involved in gene silencing by miRNA' 'negative regulation of translation, ncRNA-mediated') + EquivalentClasses('negative regulation of translation involved in gene silencing by miRNA' ObjectIntersectionOf('negative regulation of translation' ObjectSomeValueFrom('part_of' 'gene silencing by miRNA')) ) + SubClassOf('negative regulation of translation involved in gene silencing by miRNA' ObjectSomeValueFrom('part_of' 'gene silencing by miRNA')) --- !New Class!: http://www.geneontology.org/go#GO_0061423 label: positive regulation of sodium ion transport by positive regulation of transcription from RNA polymerase II promoter + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of sodium ion transport by positive regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('positive regulation of sodium ion transport by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0007468 label: regulation of rhodopsin gene expression + SubClassOf('regulation of rhodopsin gene expression' 'regulation of gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0000450 label: cleavage of bicistronic rRNA transcript (SSU-rRNA, LSU-rRNA) + SubClassOf('cleavage of bicistronic rRNA transcript (SSU-rRNA, LSU-rRNA)' 'endonucleolytic cleavage involved in rRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0006353 label: DNA-dependent transcription, termination + EquivalentClasses('DNA-dependent transcription, termination' 'termination of mitochondrial transcription' ) + SubClassOf('DNA-dependent transcription, termination' ObjectSomeValueFrom('part_of' 'transcription, DNA-dependent')) --- !New Class!: http://www.geneontology.org/go#GO_0072366 label: regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) + SubClassOf('regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter') + SubClassOf('regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_1900402 label: regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0000373 label: Group II intron splicing + SubClassOf('Group II intron splicing' 'RNA splicing, via transesterification reactions with bulged adenosine as nucleophile') --- !New Class!: http://www.geneontology.org/go#GO_1990032 label: parallel fiber + SubClassOf('parallel fiber' 'axon part') --- !New Class!: http://www.geneontology.org/go#GO_0000999 label: RNA polymerase III type 1 promoter transcriptional preinitiation complex assembly + SubClassOf('RNA polymerase III type 1 promoter transcriptional preinitiation complex assembly' 'RNA polymerase III transcriptional preinitiation complex assembly') + SubClassOf('RNA polymerase III type 1 promoter transcriptional preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'transcription initiation from RNA polymerase III type 1 promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0000437 label: carbon catabolite repression of transcription from RNA polymerase II promoter + SubClassOf('carbon catabolite repression of transcription from RNA polymerase II promoter' 'carbon catabolite repression of transcription') + SubClassOf('carbon catabolite repression of transcription from RNA polymerase II promoter' 'carbon catabolite regulation of transcription from RNA polymerase II promoter') + SubClassOf('carbon catabolite repression of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0046015 label: regulation of transcription by glucose + SubClassOf('regulation of transcription by glucose' 'carbon catabolite regulation of transcription') --- !New Class!: http://www.geneontology.org/go#GO_0039602 label: suppression by virus of host transcription initiation from RNA polymerase II promoter + SubClassOf('suppression by virus of host transcription initiation from RNA polymerase II promoter' 'suppression by virus of host transcription') --- !New Class!: http://www.geneontology.org/go#GO_0060261 label: positive regulation of transcription initiation from RNA polymerase II promoter + SubClassOf('positive regulation of transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription initiation from RNA polymerase II promoter')) + SubClassOf('positive regulation of transcription initiation from RNA polymerase II promoter' 'positive regulation of DNA-dependent transcription, initiation') + EquivalentClasses('positive regulation of transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription initiation from RNA polymerase II promoter') ) + SubClassOf('positive regulation of transcription initiation from RNA polymerase II promoter' 'regulation of transcription initiation from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0044317 label: rod spherule + SubClassOf('rod spherule' 'neuron projection') --- !New Class!: http://www.geneontology.org/go#GO_0006412 label: translation + EquivalentClasses('translation' 'plastid translation' ) + EquivalentClasses('translation' 'mitochondrial translation' ) + SubClassOf('translation' ObjectSomeValueFrom('part_of' 'gene expression')) --- !New Class!: http://www.geneontology.org/go#GO_0071432 label: peptide mating pheromone maturation involved in conjugation with cellular fusion + SubClassOf('peptide mating pheromone maturation involved in conjugation with cellular fusion' 'peptide pheromone maturation') --- !New Class!: http://www.geneontology.org/go#GO_0080120 label: CAAX-box protein maturation + SubClassOf('CAAX-box protein maturation' ObjectSomeValueFrom('has_part' 'protein processing')) + SubClassOf('CAAX-box protein maturation' 'protein maturation') --- !New Class!: http://www.geneontology.org/go#GO_0000381 label: regulation of alternative mRNA splicing, via spliceosome + SubClassOf('regulation of alternative mRNA splicing, via spliceosome' 'regulation of mRNA splicing, via spliceosome') + SubClassOf('regulation of alternative mRNA splicing, via spliceosome' ObjectSomeValueFrom('regulates' 'alternative mRNA splicing, via spliceosome')) + EquivalentClasses('regulation of alternative mRNA splicing, via spliceosome' ObjectSomeValueFrom('regulates' 'alternative mRNA splicing, via spliceosome') ) --- !New Class!: http://www.geneontology.org/go#SO_0001683 label: sequence_motif + SubClassOf('sequence_motif' 'biological_region') --- !New Class!: http://www.geneontology.org/go#PR_000021937 label: initiator methionine + SubClassOf('initiator methionine' 'immature protein part') --- !New Class!: http://www.geneontology.org/go#GO_0030908 label: protein splicing + SubClassOf('protein splicing' 'protein processing') --- !New Class!: http://www.geneontology.org/go#GO_0032063 label: negative regulation of translational initiation in response to osmotic stress + SubClassOf('negative regulation of translational initiation in response to osmotic stress' 'negative regulation of translation in response to osmotic stress') + SubClassOf('negative regulation of translational initiation in response to osmotic stress' 'regulation of translational initiation in response to osmotic stress') + SubClassOf('negative regulation of translational initiation in response to osmotic stress' 'negative regulation of translational initiation in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0070935 label: 3'-UTR-mediated mRNA stabilization + SubClassOf('3'-UTR-mediated mRNA stabilization' 'mRNA stabilization') --- !New Class!: http://www.geneontology.org/go#GO_0051092 label: positive regulation of NF-kappaB transcription factor activity + SubClassOf('positive regulation of NF-kappaB transcription factor activity' 'positive regulation of sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0097301 label: regulation of potassium ion concentration by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of potassium ion concentration by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#OMIT_0000119 label: TumorCellDeath + SubClassOf('TumorCellDeath' 'PathologicalEvent') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_2759 label: Eukaryota + SubClassOf('Eukaryota' 'CellularOrganism') --- !New Class!: http://www.geneontology.org/go#GO_0001033 label: RNA polymerase III type 3 promoter TFIIIB recruiting transcription factor activity + SubClassOf('RNA polymerase III type 3 promoter TFIIIB recruiting transcription factor activity' 'RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity') + SubClassOf('RNA polymerase III type 3 promoter TFIIIB recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III type 3 promoter transcriptional preinitiation complex assembly')) --- !New Class!: http://www.geneontology.org/go#GO_0003747 label: translation release factor activity + SubClassOf('translation release factor activity' 'translation termination factor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000227 label: PsychologicalTreatment + SubClassOf('PsychologicalTreatment' 'Treatment') --- !New Class!: http://www.geneontology.org/go#GO_0008135 label: translation factor activity, nucleic acid binding + SubClassOf('translation factor activity, nucleic acid binding' ObjectSomeValueFrom('part_of' 'translation')) --- !New Class!: http://www.geneontology.org/go#GO_1902368 label: heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region + EquivalentClasses('heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region' ObjectSomeValueFrom('part_of' 'chromatin silencing at centromere outer repeat region') ) + SubClassOf('heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region' ObjectSomeValueFrom('part_of' 'chromatin silencing at centromere outer repeat region')) + SubClassOf('heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region' 'heterochromatin maintenance involved in chromatin silencing') --- !New Class!: http://www.geneontology.org/go#SO_0000627 label: insulator + SubClassOf('insulator' 'transcriptional_cis_regulatory_region') --- !New Class!: http://www.geneontology.org/go#GO_0061417 label: negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress + SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress' 'negative regulation of transcription from RNA polymerase II promoter in response to stress') + SubClassOf('negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress' 'regulation of transcription from RNA polymerase II promoter in response to oxidative stress') --- !New Class!: http://www.geneontology.org/go#GO_0000377 label: RNA splicing, via transesterification reactions with bulged adenosine as nucleophile + SubClassOf('RNA splicing, via transesterification reactions with bulged adenosine as nucleophile' 'RNA splicing, via transesterification reactions') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_33634 label: Stramenopiles + SubClassOf('Stramenopiles' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#GO_1901409 label: positive regulation of phosphorylation of RNA polymerase II C-terminal domain + EquivalentClasses('positive regulation of phosphorylation of RNA polymerase II C-terminal domain' ObjectSomeValueFrom('positively_regulates' 'phosphorylation of RNA polymerase II C-terminal domain') ) + SubClassOf('positive regulation of phosphorylation of RNA polymerase II C-terminal domain' 'regulation of phosphorylation of RNA polymerase II C-terminal domain') + SubClassOf('positive regulation of phosphorylation of RNA polymerase II C-terminal domain' ObjectSomeValueFrom('positively_regulates' 'phosphorylation of RNA polymerase II C-terminal domain')) --- !New Class!: http://www.geneontology.org/go#GO_0001144 label: mitochondrial RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity + SubClassOf('mitochondrial RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding mitochondrial RNA polymerase transcription factor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000213 label: PulmonaryCarcinoidTumor + SubClassOf('PulmonaryCarcinoidTumor' 'Carcinoma') --- !New Class!: http://www.geneontology.org/go#OMIT_0000056 label: MuscleTissueCell + SubClassOf('MuscleTissueCell' 'cell') --- !New Class!: http://www.geneontology.org/go#GO_0006417 label: regulation of translation + SubClassOf('regulation of translation' ObjectSomeValueFrom('regulates' 'translation')) + EquivalentClasses('regulation of translation' ObjectSomeValueFrom('regulates' 'translation') ) + EquivalentClasses('regulation of translation' 'regulation of translation involved in anterior/posterior axis specification' ) + SubClassOf('regulation of translation' 'posttranscriptional regulation of gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0000411 label: positive regulation of transcription by galactose + SubClassOf('positive regulation of transcription by galactose' 'carbon catabolite activation of transcription') + SubClassOf('positive regulation of transcription by galactose' 'regulation of transcription by galactose') --- !New Class!: http://www.geneontology.org/go#GO_1900403 label: negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_1901589 label: axon microtubule bundle + EquivalentClasses('axon microtubule bundle' ObjectSomeValueFrom('part_of' 'axon') ) + SubClassOf('axon microtubule bundle' 'axon part') + SubClassOf('axon microtubule bundle' ObjectSomeValueFrom('part_of' 'axon')) --- !New Class!: http://www.geneontology.org/go#PR_000018263 label: amino acid chain + SubClassOf('amino acid chain' 'molecular entity') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_311790 label: Afrotheria + SubClassOf('Afrotheria' 'Eutheria') --- !New Class!: http://www.geneontology.org/go#SO_0000090 label: plastid_gene + SubClassOf('plastid_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0008175 label: tRNA methyltransferase activity + SubClassOf('tRNA methyltransferase activity' ObjectSomeValueFrom('part_of' 'tRNA methylation')) --- !New Class!: http://www.geneontology.org/go#GO_0044027 label: hypermethylation of CpG island + SubClassOf('hypermethylation of CpG island' 'DNA hypermethylation') --- !New Class!: http://www.geneontology.org/go#GO_1901838 label: positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter + EquivalentClasses('positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' ObjectSomeValueFrom('positively_regulates' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter') ) + SubClassOf('positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' 'positive regulation of transcription from RNA polymerase I promoter') + SubClassOf('positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' ObjectSomeValueFrom('positively_regulates' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter')) + SubClassOf('positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' 'regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter') --- !New Class!: http://www.geneontology.org/go#GO_0072362 label: regulation of glycolysis by negative regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of glycolysis by negative regulation of transcription from RNA polymerase II promoter' 'regulation of glycolysis by regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of glycolysis by negative regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('negatively_regulates' 'transcription from RNA polymerase II promoter') ) + SubClassOf('regulation of glycolysis by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0052908 label: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity + SubClassOf('16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity' 'rRNA (adenine-N6-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000162 label: SplenicOsteoma + SubClassOf('SplenicOsteoma' 'ConnectiveOrigin') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_33858 label: environmental samples + SubClassOf('environmental samples' 'Opisthokonta') + SubClassOf('environmental samples' 'Bilateria') + SubClassOf('environmental samples' 'Eukaryota') + SubClassOf('environmental samples' 'Chordata') + SubClassOf('environmental samples' 'Metazoa') + SubClassOf('environmental samples' 'Mammalia') --- !New Class!: http://www.geneontology.org/go#GO_2001125 label: negative regulation of translational frameshifting + SubClassOf('negative regulation of translational frameshifting' 'negative regulation of translational elongation') + SubClassOf('negative regulation of translational frameshifting' 'regulation of translational frameshifting') + EquivalentClasses('negative regulation of translational frameshifting' ObjectSomeValueFrom('negatively_regulates' 'translational frameshifting') ) + SubClassOf('negative regulation of translational frameshifting' ObjectSomeValueFrom('negatively_regulates' 'translational frameshifting')) --- !New Class!: http://www.geneontology.org/go#GO_0019056 label: modulation by virus of host transcription + SubClassOf('modulation by virus of host transcription' 'regulation of transcription, DNA-dependent') + SubClassOf('modulation by virus of host transcription' 'modulation by virus of host gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0060820 label: inactivation of X chromosome by heterochromatin assembly + SubClassOf('inactivation of X chromosome by heterochromatin assembly' 'dosage compensation by inactivation of X chromosome') --- !New Class!: http://www.geneontology.org/go#snap_ObjectAggregate label: object_aggregate + DisjointClasses('object_aggregate' 'site') + DisjointClasses('fiat_object_part' 'object_aggregate') + SubClassOf('object_aggregate' 'material_entity') + DisjointClasses('object_aggregate' 'object_boundary') + DisjointClasses('object' 'object'Aggregate) --- !New Class!: http://www.geneontology.org/go#GO_0000463 label: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) + SubClassOf('maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'maturation of LSU-rRNA') --- !New Class!: http://www.geneontology.org/go#GO_0033119 label: negative regulation of RNA splicing + SubClassOf('negative regulation of RNA splicing' 'regulation of RNA splicing') + SubClassOf('negative regulation of RNA splicing' ObjectSomeValueFrom('negatively_regulates' 'RNA splicing')) + EquivalentClasses('negative regulation of RNA splicing' ObjectSomeValueFrom('negatively_regulates' 'RNA splicing') ) --- !New Class!: http://www.geneontology.org/go#GO_2000721 label: positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation' ) + SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#SO_0000233 label: mature_transcript + SubClassOf('mature_transcript' ObjectSomeValueFrom('derives_from' 'primary_transcript')) + SubClassOf('mature_transcript' 'transcript') --- !New Class!: http://www.geneontology.org/go#GO_0051747 label: cytosine C-5 DNA demethylase activity + SubClassOf('cytosine C-5 DNA demethylase activity' 'DNA demethylase activity') --- !New Class!: http://www.geneontology.org/go#GO_0010757 label: negative regulation of plasminogen activation + SubClassOf('negative regulation of plasminogen activation' ObjectSomeValueFrom('negatively_regulates' 'plasminogen activation')) + SubClassOf('negative regulation of plasminogen activation' 'regulation of plasminogen activation') + EquivalentClasses('negative regulation of plasminogen activation' ObjectSomeValueFrom('negatively_regulates' 'plasminogen activation') ) + SubClassOf('negative regulation of plasminogen activation' 'negative regulation of protein processing') --- !New Class!: http://www.geneontology.org/go#GO_0038004 label: epidermal growth factor receptor ligand maturation + SubClassOf('epidermal growth factor receptor ligand maturation' 'protein maturation') --- !New Class!: http://www.geneontology.org/go#SO_0005855 label: gene_group + SubClassOf('gene_group' 'biological_region') --- !New Class!: http://www.geneontology.org/go#snap_ZeroDimensionalRegion label: zero_dimensional_region + DisjointClasses('three_dimensional_region' 'zero_dimensional_region') + DisjointClasses('one_dimensional_region' 'zero_dimensional_region') + DisjointClasses('two_dimensional_region' 'zero_dimensional_region') + SubClassOf('zero_dimensional_region' 'spatial_region') --- !New Class!: http://www.geneontology.org/go#GO_0008990 label: rRNA (guanine-N2-)-methyltransferase activity + SubClassOf('rRNA (guanine-N2-)-methyltransferase activity' 'rRNA (guanine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_1900427 label: regulation of cellular response to oxidative stress by regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of cellular response to oxidative stress by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of cellular response to oxidative stress by regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0044074 label: negative regulation by symbiont of host translation + SubClassOf('negative regulation by symbiont of host translation' 'negative regulation of translation') + SubClassOf('negative regulation by symbiont of host translation' 'modulation by symbiont of host translation') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_33511 label: Deuterostomia + SubClassOf('Deuterostomia' 'Bilateria') --- !New Class!: http://www.geneontology.org/go#GO_2000634 label: regulation of primary miRNA processing + SubClassOf('regulation of primary miRNA processing' 'regulation of gene silencing by miRNA') + SubClassOf('regulation of primary miRNA processing' 'regulation of production of small RNA involved in gene silencing by RNA') + SubClassOf('regulation of primary miRNA processing' ObjectSomeValueFrom('regulates' 'primary miRNA processing')) + EquivalentClasses('regulation of primary miRNA processing' ObjectSomeValueFrom('regulates' 'primary miRNA processing') ) --- !New Class!: http://www.geneontology.org/go#GO_0016436 label: rRNA (uridine) methyltransferase activity + SubClassOf('rRNA (uridine) methyltransferase activity' 'rRNA methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0050686 label: negative regulation of mRNA processing + SubClassOf('negative regulation of mRNA processing' 'regulation of mRNA processing') + EquivalentClasses('negative regulation of mRNA processing' ObjectSomeValueFrom('negatively_regulates' 'mRNA processing') ) + SubClassOf('negative regulation of mRNA processing' ObjectSomeValueFrom('negatively_regulates' 'mRNA processing')) --- !New Class!: http://www.geneontology.org/go#GO_0000981 label: sequence-specific DNA binding RNA polymerase II transcription factor activity + SubClassOf('sequence-specific DNA binding RNA polymerase II transcription factor activity' ObjectSomeValueFrom('part_of' 'regulation of transcription from RNA polymerase II promoter')) + SubClassOf('sequence-specific DNA binding RNA polymerase II transcription factor activity' 'sequence-specific DNA binding transcription factor activity') + SubClassOf('sequence-specific DNA binding RNA polymerase II transcription factor activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0038051 label: glucocorticoid-activated RNA polymerase II transcription factor binding transcription factor activity + SubClassOf('glucocorticoid-activated RNA polymerase II transcription factor binding transcription factor activity' 'ligand-activated RNA polymerase II transcription factor binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0006425 label: glutaminyl-tRNA aminoacylation + SubClassOf('glutaminyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') + EquivalentClasses('glutaminyl-tRNA aminoacylation' 'mitochondrial glutaminyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_2001159 label: regulation of CVT pathway + EquivalentClasses('regulation of CVT pathway' ObjectSomeValueFrom('regulates' 'CVT pathway') ) + SubClassOf('regulation of CVT pathway' ObjectSomeValueFrom('regulates' 'CVT pathway')) --- !New Class!: http://www.geneontology.org/go#GO_0042734 label: presynaptic membrane + SubClassOf('presynaptic membrane' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0033402 label: UUC codon-amino acid adaptor activity + SubClassOf('UUC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0050685 label: positive regulation of mRNA processing + SubClassOf('positive regulation of mRNA processing' 'regulation of mRNA processing') + SubClassOf('positive regulation of mRNA processing' ObjectSomeValueFrom('positively_regulates' 'mRNA processing')) + EquivalentClasses('positive regulation of mRNA processing' ObjectSomeValueFrom('positively_regulates' 'mRNA processing') ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000166 label: SplenicLymphangioma + SubClassOf('SplenicLymphangioma' 'EpithelialOrigin') --- !New Class!: http://www.geneontology.org/go#GO_0036417 label: tRNA destabilization + SubClassOf('tRNA destabilization' 'regulation of tRNA stability') + SubClassOf('tRNA destabilization' 'RNA destabilization') --- !New Class!: http://www.geneontology.org/go#OMIT_0000116 label: PathologicalEvent + SubClassOf('PathologicalEvent' 'biological_process') --- !New Class!: http://www.geneontology.org/go#GO_0006367 label: transcription initiation from RNA polymerase II promoter + SubClassOf('transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase II promoter')) + SubClassOf('transcription initiation from RNA polymerase II promoter' 'DNA-dependent transcription, initiation') --- !New Class!: http://www.geneontology.org/go#GO_0001152 label: RNA polymerase III type 1 promoter sequence-specific DNA binding TFIIIC recruiting transcription factor activity + SubClassOf('RNA polymerase III type 1 promoter sequence-specific DNA binding TFIIIC recruiting transcription factor activity' 'sequence-specific DNA binding transcription factor recruiting transcription factor activity') + SubClassOf('RNA polymerase III type 1 promoter sequence-specific DNA binding TFIIIC recruiting transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III type 1 promoter transcriptional preinitiation complex assembly')) + SubClassOf('RNA polymerase III type 1 promoter sequence-specific DNA binding TFIIIC recruiting transcription factor activity' 'RNA polymerase III transcription factor recruiting transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0002130 label: wobble position ribose methylation + SubClassOf('wobble position ribose methylation' 'tRNA nucleoside ribose methylation') --- !New Class!: http://www.geneontology.org/go#GO_0035195 label: gene silencing by miRNA + SubClassOf('gene silencing by miRNA' 'posttranscriptional gene silencing by RNA') --- !New Class!: http://www.geneontology.org/go#GO_0060213 label: positive regulation of nuclear-transcribed mRNA poly(A) tail shortening + SubClassOf('positive regulation of nuclear-transcribed mRNA poly(A) tail shortening' ObjectSomeValueFrom('positively_regulates' 'nuclear-transcribed mRNA poly(A) tail shortening')) + SubClassOf('positive regulation of nuclear-transcribed mRNA poly(A) tail shortening' 'regulation of nuclear-transcribed mRNA poly(A) tail shortening') + SubClassOf('positive regulation of nuclear-transcribed mRNA poly(A) tail shortening' 'positive regulation of mRNA 3'-end processing') + EquivalentClasses('positive regulation of nuclear-transcribed mRNA poly(A) tail shortening' ObjectSomeValueFrom('positively_regulates' 'nuclear-transcribed mRNA poly(A) tail shortening') ) --- !New Class!: http://www.geneontology.org/go#GO_1900018 label: phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex + EquivalentClasses('phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex' ObjectIntersectionOf('phosphorylation of RNA polymerase II C-terminal domain serine 5 residues' ObjectSomeValueFrom('part_of' 'recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex')) ) + SubClassOf('phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex' ObjectSomeValueFrom('part_of' 'recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex')) + SubClassOf('phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex' 'phosphorylation of RNA polymerase II C-terminal domain serine 5 residues') --- !New Class!: http://www.geneontology.org/go#GO_0061395 label: positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance' 'regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance') --- !New Class!: http://www.geneontology.org/go#GO_0031556 label: transcriptional attenuation by ribosome + SubClassOf('transcriptional attenuation by ribosome' 'transcriptional attenuation') --- !New Class!: http://www.geneontology.org/go#GO_0033426 label: CAC codon-amino acid adaptor activity + SubClassOf('CAC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#SO_1001265 label: mRNA_recoded_by_codon_redefinition + SubClassOf('mRNA_recoded_by_codon_redefinition' 'recoded_mRNA') --- !New Class!: http://www.geneontology.org/go#GO_0035969 label: positive regulation of sterol import by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of sterol import by positive regulation of transcription from RNA polymerase II promoter' 'regulation of sterol import by regulation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of sterol import by positive regulation of transcription from RNA polymerase II promoter' 'regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of sterol import by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000109 label: SkeletalMuscle + SubClassOf('SkeletalMuscle' 'MuscleTissue') --- !New Class!: http://www.geneontology.org/go#OMIT_0000198 label: AdultTCellLeukemiaLymphoma + SubClassOf('AdultTCellLeukemiaLymphoma' 'MatureTOrNKCellNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0001106 label: RNA polymerase II transcription corepressor activity + SubClassOf('RNA polymerase II transcription corepressor activity' 'RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription') + SubClassOf('RNA polymerase II transcription corepressor activity' 'RNA polymerase II transcription cofactor activity') + SubClassOf('RNA polymerase II transcription corepressor activity' ObjectSomeValueFrom('part_of' 'negative regulation of transcription from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0060967 label: negative regulation of gene silencing by RNA + SubClassOf('negative regulation of gene silencing by RNA' 'negative regulation of gene silencing') + SubClassOf('negative regulation of gene silencing by RNA' ObjectSomeValueFrom('negatively_regulates' 'gene silencing by RNA')) + SubClassOf('negative regulation of gene silencing by RNA' 'regulation of gene silencing by RNA') + EquivalentClasses('negative regulation of gene silencing by RNA' ObjectSomeValueFrom('negatively_regulates' 'gene silencing by RNA') ) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_376911 label: Strepsirrhini + SubClassOf('Strepsirrhini' 'Primates') --- !New Class!: http://www.geneontology.org/go#GO_0090473 label: lys-arg specific dibasic protein processing + SubClassOf('lys-arg specific dibasic protein processing' 'dibasic protein processing') --- !New Class!: http://www.geneontology.org/go#SO_0001411 label: biological_region + SubClassOf('biological_region' 'region') --- !New Class!: http://www.geneontology.org/go#OMIT_0000103 label: NerveTissue + SubClassOf('NerveTissue' 'AdultTissue') --- !New Class!: http://www.geneontology.org/go#GO_0044725 label: chromatin reprogramming in the zygote + SubClassOf('chromatin reprogramming in the zygote' 'DNA methylation involved in embryo development') --- !New Class!: http://www.geneontology.org/go#OMIT_0000809 label: NegativeStrandInsertion + SubClassOf('NegativeStrandInsertion' 'TEInsertion') --- !New Class!: http://www.geneontology.org/go#GO_1901313 label: positive regulation of gene expression involved in extracellular matrix organization + SubClassOf('positive regulation of gene expression involved in extracellular matrix organization' 'positive regulation of gene expression') + EquivalentClasses('positive regulation of gene expression involved in extracellular matrix organization' ObjectSomeValueFrom('positively_regulates' 'gene expression involved in extracellular matrix organization') ) + SubClassOf('positive regulation of gene expression involved in extracellular matrix organization' 'regulation of gene expression involved in extracellular matrix organization') + SubClassOf('positive regulation of gene expression involved in extracellular matrix organization' ObjectSomeValueFrom('positively_regulates' 'gene expression involved in extracellular matrix organization')) --- !New Class!: http://www.geneontology.org/go#SO_0001268 label: snRNA_gene + SubClassOf('snRNA_gene' 'ncRNA_gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000160 label: SplenicChondroma + SubClassOf('SplenicChondroma' 'ConnectiveOrigin') --- !New Class!: http://www.geneontology.org/go#GO_2001165 label: positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues + SubClassOf('positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' ObjectSomeValueFrom('positively_regulates' 'phosphorylation of RNA polymerase II C-terminal domain serine 2 residues')) + SubClassOf('positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' 'positive regulation of phosphorylation of RNA polymerase II C-terminal domain') + EquivalentClasses('positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' ObjectSomeValueFrom('positively_regulates' 'phosphorylation of RNA polymerase II C-terminal domain serine 2 residues') ) + SubClassOf('positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' 'regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues') --- !New Class!: http://www.geneontology.org/go#GO_0071930 label: negative regulation of transcription involved in G1/S transition of mitotic cell cycle + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription involved in G1/S transition of mitotic cell cycle' ) + SubClassOf('negative regulation of transcription involved in G1/S transition of mitotic cell cycle' 'regulation of transcription involved in G1/S transition of mitotic cell cycle') + SubClassOf('negative regulation of transcription involved in G1/S transition of mitotic cell cycle' 'negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#SO_0001235 label: replicon + SubClassOf('replicon' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0071931 label: positive regulation of transcription involved in G1/S transition of mitotic cell cycle + SubClassOf('positive regulation of transcription involved in G1/S transition of mitotic cell cycle' 'regulation of transcription involved in G1/S transition of mitotic cell cycle') + SubClassOf('positive regulation of transcription involved in G1/S transition of mitotic cell cycle' 'positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription involved in G1/S transition of mitotic cell cycle' ) --- !New Class!: http://www.geneontology.org/go#GO_1900249 label: positive regulation of cytoplasmic translational elongation + EquivalentClasses('positive regulation of cytoplasmic translational elongation' ObjectSomeValueFrom('positively_regulates' 'cytoplasmic translational elongation') ) + SubClassOf('positive regulation of cytoplasmic translational elongation' 'positive regulation of translational elongation') + SubClassOf('positive regulation of cytoplasmic translational elongation' ObjectSomeValueFrom('positively_regulates' 'cytoplasmic translational elongation')) + SubClassOf('positive regulation of cytoplasmic translational elongation' 'regulation of cytoplasmic translational elongation') --- !New Class!: http://www.geneontology.org/go#SO_0001645 label: genetic_marker + SubClassOf('genetic_marker' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0070126 label: mitochondrial translational termination + EquivalentClasses('translational termination' 'mitochondrial translational termination' ) + SubClassOf('mitochondrial translational termination' 'translational termination') + SubClassOf('mitochondrial translational termination' ObjectSomeValueFrom('part_of' 'mitochondrial translation')) --- !New Class!: http://www.geneontology.org/go#GO_0016540 label: protein autoprocessing + SubClassOf('protein autoprocessing' 'protein processing') --- !New Class!: http://www.geneontology.org/go#CHEBI_23367 label: molecular entity + SubClassOf('molecular entity' 'object') --- !New Class!: http://www.geneontology.org/go#GO_0070150 label: mitochondrial glycyl-tRNA aminoacylation + EquivalentClasses('glycyl-tRNA aminoacylation' 'mitochondrial glycyl-tRNA aminoacylation' ) + SubClassOf('mitochondrial glycyl-tRNA aminoacylation' 'tRNA aminoacylation for mitochondrial protein translation') + SubClassOf('mitochondrial glycyl-tRNA aminoacylation' 'glycyl-tRNA aminoacylation') --- !New Class!: http://www.geneontology.org/go#SO_0000818 label: wild_type_rescue_gene + SubClassOf('wild_type_rescue_gene' 'rescue_gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000803 label: TEInsertion + SubClassOf('TEInsertion' 'insertion') --- !New Class!: http://www.geneontology.org/go#GO_0071704 label: organic substance metabolic process + SubClassOf('organic substance metabolic process' 'metabolic process') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_190469 label: Bilateria incertae sedis + SubClassOf('Bilateria incertae sedis' 'Bilateria') --- !New Class!: http://www.geneontology.org/go#GO_0097428 label: protein maturation by iron-sulfur cluster transfer + SubClassOf('protein maturation by iron-sulfur cluster transfer' 'protein maturation') --- !New Class!: http://www.geneontology.org/go#GO_0008989 label: rRNA (guanine-N1-)-methyltransferase activity + SubClassOf('rRNA (guanine-N1-)-methyltransferase activity' 'rRNA (guanine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000202 label: TCellGranularLymphocyticLeukemia + SubClassOf('TCellGranularLymphocyticLeukemia' 'MatureTOrNKCellNeoplasm') --- !New Class!: http://www.geneontology.org/go#SO_0000830 label: chromosome_part + SubClassOf('chromosome_part' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0010756 label: positive regulation of plasminogen activation + SubClassOf('positive regulation of plasminogen activation' 'positive regulation of protein processing') + SubClassOf('positive regulation of plasminogen activation' ObjectSomeValueFrom('positively_regulates' 'plasminogen activation')) + EquivalentClasses('positive regulation of plasminogen activation' ObjectSomeValueFrom('positively_regulates' 'plasminogen activation') ) + SubClassOf('positive regulation of plasminogen activation' 'regulation of plasminogen activation') --- !New Class!: http://www.geneontology.org/go#GO_1900413 label: positive regulation of phospholipid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of phospholipid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('positive regulation of phospholipid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0000376 label: RNA splicing, via transesterification reactions with guanosine as nucleophile + SubClassOf('RNA splicing, via transesterification reactions with guanosine as nucleophile' 'RNA splicing, via transesterification reactions') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_543769 label: Rhizaria + SubClassOf('Rhizaria' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#GO_0001124 label: transcription elongation from bacterial-type RNA polymerase promoter + SubClassOf('transcription elongation from bacterial-type RNA polymerase promoter' ObjectSomeValueFrom('part_of' 'transcription from bacterial-type RNA polymerase promoter')) + SubClassOf('transcription elongation from bacterial-type RNA polymerase promoter' 'DNA-dependent transcription, elongation') --- !New Class!: http://www.geneontology.org/go#SO_0000110 label: sequence_feature + SubClassOf('sequence_feature' 'object') --- !New Class!: http://www.geneontology.org/go#OMIT_0000801 label: TEJuxtaposition + SubClassOf('TEJuxtaposition' 'biological_region') + SubClassOf('TEJuxtaposition' ObjectSomeValueFrom('resultedFrom' 'TEInsertion')) --- !New Class!: http://www.geneontology.org/go#GO_0033412 label: UAG codon-amino acid adaptor activity + SubClassOf('UAG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#SO_0000111 label: transposable_element_gene + SubClassOf('transposable_element_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0016434 label: rRNA (cytosine) methyltransferase activity + SubClassOf('rRNA (cytosine) methyltransferase activity' 'rRNA methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000182 label: MatureTOrNKCellNeoplasm + SubClassOf('MatureTOrNKCellNeoplasm' 'LymphoidNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0046780 label: suppression by virus of host mRNA splicing + SubClassOf('suppression by virus of host mRNA splicing' 'suppression by virus of host mRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0000457 label: endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) + SubClassOf('endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)' ObjectSomeValueFrom('part_of' 'maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)')) + SubClassOf('endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)') + SubClassOf('endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)' ObjectSomeValueFrom('part_of' 'maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)')) --- !New Class!: http://www.geneontology.org/go#GO_0001194 label: maintenance of transcriptional fidelity during DNA-dependent transcription elongation from bacterial-type RNA polymerase promoter + SubClassOf('maintenance of transcriptional fidelity during DNA-dependent transcription elongation from bacterial-type RNA polymerase promoter' 'maintenance of transcriptional fidelity during DNA-dependent transcription elongation') + SubClassOf('maintenance of transcriptional fidelity during DNA-dependent transcription elongation from bacterial-type RNA polymerase promoter' ObjectSomeValueFrom('part_of' 'transcription elongation from bacterial-type RNA polymerase promoter')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000216 label: PulmonarySmallCellCarcinoma + SubClassOf('PulmonarySmallCellCarcinoma' 'Carcinoma') --- !New Class!: http://www.geneontology.org/go#GO_1900477 label: negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter + SubClassOf('negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000164 label: Lymphangioma + SubClassOf('Lymphangioma' 'EpithelialOrigin') --- !New Class!: http://www.geneontology.org/go#GO_0002937 label: tRNA 4-thiouridine biosynthesis + SubClassOf('tRNA 4-thiouridine biosynthesis' 'tRNA thio-modification') --- !New Class!: http://www.geneontology.org/go#GO_0001732 label: formation of translation initiation complex + SubClassOf('formation of translation initiation complex' ObjectSomeValueFrom('part_of' 'translational initiation')) --- !New Class!: http://www.geneontology.org/go#snap_SpecificallyDependentContinuant label: specifically_dependent_continuant + DisjointClasses('generically_dependent_continuant' 'specifically_dependent_continuant') + EquivalentClasses('specifically_dependent_continuant' ObjectUnionOf('quality' 'realizable_entity') ) + SubClassOf('specifically_dependent_continuant' 'dependent_continuant') --- !New Class!: http://www.geneontology.org/go#GO_0006624 label: vacuolar protein processing + EquivalentClasses('vacuolar protein processing' 'protein processing' ) + SubClassOf('vacuolar protein processing' 'protein processing') --- !New Class!: http://www.geneontology.org/go#GO_0008150 label: biological_process + DisjointClasses('cellular_component' 'biological_process') + SubClassOf('biological_process' 'process') --- !New Class!: http://www.geneontology.org/go#GO_1900473 label: negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#OMIT_0000195 label: MantleCellLymphoma + SubClassOf('MantleCellLymphoma' 'MatureBCellNeoplasm') --- !New Class!: http://www.geneontology.org/go#GO_0002940 label: tRNA N2-guanine methylation + SubClassOf('tRNA N2-guanine methylation' 'tRNA methylation') --- !New Class!: http://www.geneontology.org/go#GO_0033448 label: AGG codon-amino acid adaptor activity + SubClassOf('AGG codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0090309 label: positive regulation of methylation-dependent chromatin silencing + SubClassOf('positive regulation of methylation-dependent chromatin silencing' 'regulation of methylation-dependent chromatin silencing') + SubClassOf('positive regulation of methylation-dependent chromatin silencing' 'positive regulation of chromatin silencing') + EquivalentClasses('positive regulation of methylation-dependent chromatin silencing' ObjectSomeValueFrom('positively_regulates' 'methylation-dependent chromatin silencing') ) + SubClassOf('positive regulation of methylation-dependent chromatin silencing' ObjectSomeValueFrom('positively_regulates' 'methylation-dependent chromatin silencing')) --- !New Class!: http://www.geneontology.org/go#span_Process label: process + DisjointClasses('process' 'process'ualContext) + DisjointClasses('process' 'process'Boundary) + DisjointClasses('fiat_process_part' 'process') + DisjointClasses('process' 'process'Aggregate) + SubClassOf('process' 'process'ualEntity) --- !New Class!: http://www.geneontology.org/go#GO_0000480 label: endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) + SubClassOf('endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) + SubClassOf('endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)') --- !New Class!: http://www.geneontology.org/go#GO_0006421 label: asparaginyl-tRNA aminoacylation + SubClassOf('asparaginyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') + EquivalentClasses('asparaginyl-tRNA aminoacylation' 'mitochondrial asparaginyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0030424 label: axon + SubClassOf('axon' 'neuron projection') --- !New Class!: http://www.geneontology.org/go#GO_0035516 label: oxidative DNA demethylase activity + SubClassOf('oxidative DNA demethylase activity' 'DNA demethylase activity') + SubClassOf('oxidative DNA demethylase activity' ObjectSomeValueFrom('part_of' 'oxidative DNA demethylation')) --- !New Class!: http://www.geneontology.org/go#GO_0035760 label: cytoplasmic polyadenylation-dependent rRNA catabolic process + SubClassOf('cytoplasmic polyadenylation-dependent rRNA catabolic process' 'polyadenylation-dependent ncRNA catabolic process') --- !New Class!: http://www.geneontology.org/go#OMIT_0000206 label: DuctalCarcinoma + SubClassOf('DuctalCarcinoma' 'Carcinoma') --- !New Class!: http://www.geneontology.org/go#GO_0048026 label: positive regulation of mRNA splicing, via spliceosome + SubClassOf('positive regulation of mRNA splicing, via spliceosome' ObjectSomeValueFrom('positively_regulates' 'mRNA splicing, via spliceosome')) + SubClassOf('positive regulation of mRNA splicing, via spliceosome' 'regulation of mRNA splicing, via spliceosome') + EquivalentClasses('positive regulation of mRNA splicing, via spliceosome' ObjectSomeValueFrom('positively_regulates' 'mRNA splicing, via spliceosome') ) + SubClassOf('positive regulation of mRNA splicing, via spliceosome' 'positive regulation of RNA splicing') + SubClassOf('positive regulation of mRNA splicing, via spliceosome' 'positive regulation of mRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0036252 label: positive regulation of transcription from RNA polymerase II promoter in response to menadione + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to menadione' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#SO_0001869 label: functional_candidate_gene + SubClassOf('functional_candidate_gene' 'candidate_gene') --- !New Class!: http://www.geneontology.org/go#GO_0039573 label: suppression by virus of host complement activation + SubClassOf('suppression by virus of host complement activation' 'negative regulation of complement activation') --- !New Class!: http://www.geneontology.org/go#GO_0007323 label: peptide pheromone maturation + SubClassOf('peptide pheromone maturation' 'protein maturation') --- !New Class!: http://www.geneontology.org/go#GO_0000183 label: chromatin silencing at rDNA + SubClassOf('chromatin silencing at rDNA' 'chromatin silencing') --- !New Class!: http://www.geneontology.org/go#GO_0045183 label: translation factor activity, non-nucleic acid binding + SubClassOf('translation factor activity, non-nucleic acid binding' 'translation regulator activity') --- !New Class!: http://www.geneontology.org/go#GO_0000488 label: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) + SubClassOf('maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)' 'maturation of LSU-rRNA') --- !New Class!: http://www.geneontology.org/go#GO_0060818 label: inactivation of paternal X chromosome by genetic imprinting + SubClassOf('inactivation of paternal X chromosome by genetic imprinting' 'inactivation of paternal X chromosome') + SubClassOf('inactivation of paternal X chromosome by genetic imprinting' 'inactivation of X chromosome by genetic imprinting') --- !New Class!: http://www.geneontology.org/go#GO_0060733 label: regulation of eIF2 alpha phosphorylation by amino acid starvation + SubClassOf('regulation of eIF2 alpha phosphorylation by amino acid starvation' ObjectSomeValueFrom('regulates' 'regulation of translational initiation by eIF2 alpha phosphorylation')) --- !New Class!: http://www.geneontology.org/go#GO_0060962 label: regulation of ribosomal protein gene transcription from RNA polymerase II promoter + SubClassOf('regulation of ribosomal protein gene transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0043170 label: macromolecule metabolic process + SubClassOf('macromolecule metabolic process' 'organic substance metabolic process') --- !New Class!: http://www.geneontology.org/go#GO_0044299 label: C-fiber + SubClassOf('C-fiber' 'axon') --- !New Class!: http://www.geneontology.org/go#SO_0000693 label: gene_with_recoded_mRNA + SubClassOf('gene_with_recoded_mRNA' 'protein_coding_gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000147 label: IntermediateGradeNeoplasm + SubClassOf('IntermediateGradeNeoplasm' 'Tumor') --- !New Class!: http://www.geneontology.org/go#GO_0044295 label: axonal growth cone + SubClassOf('axonal growth cone' 'axon part') + SubClassOf('axonal growth cone' 'growth cone') --- !New Class!: http://www.geneontology.org/go#GO_0002946 label: tRNA C5-cytosine methylation + SubClassOf('tRNA C5-cytosine methylation' 'tRNA methylation') --- !New Class!: http://www.geneontology.org/go#GO_0036086 label: positive regulation of transcription from RNA polymerase II promoter in response to iron ion starvation + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to iron ion starvation' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to iron ion starvation' 'regulation of transcription from RNA polymerase II promoter in response to iron ion starvation') --- !New Class!: http://www.geneontology.org/go#OMIT_0000183 label: LymphocyteDepletionHL + SubClassOf('LymphocyteDepletionHL' 'HodgkinLymphoma') --- !New Class!: http://www.geneontology.org/go#OMIT_0000113 label: Mesoderm + SubClassOf('Mesoderm' 'EmbryonicTissue') --- !New Class!: http://www.geneontology.org/go#GO_2000732 label: positive regulation of termination of RNA polymerase I transcription + SubClassOf('positive regulation of termination of RNA polymerase I transcription' 'regulation of termination of RNA polymerase I transcription') + SubClassOf('positive regulation of termination of RNA polymerase I transcription' ObjectSomeValueFrom('positively_regulates' 'termination of RNA polymerase I transcription')) + SubClassOf('positive regulation of termination of RNA polymerase I transcription' 'positive regulation of DNA-dependent transcription, termination') + EquivalentClasses('positive regulation of termination of RNA polymerase I transcription' ObjectSomeValueFrom('positively_regulates' 'termination of RNA polymerase I transcription') ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000348 label: SympatheticNervousSystem + SubClassOf('SympatheticNervousSystem' 'AutonomicNervousSystem') --- !New Class!: http://www.geneontology.org/go#GO_1900392 label: regulation of transport by negative regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of transport by negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'regulation of transport by negative regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0032088 label: negative regulation of NF-kappaB transcription factor activity + SubClassOf('negative regulation of NF-kappaB transcription factor activity' 'negative regulation of sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0061406 label: positive regulation of transcription from RNA polymerase II promoter in response to glucose starvation + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to glucose starvation' 'positive regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_5752 label: Heterolobosea + SubClassOf('Heterolobosea' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#SO_0000138 label: gene_rearranged_at_DNA_level + SubClassOf('gene_rearranged_at_DNA_level' 'epigenetically_modified_gene') --- !New Class!: http://www.geneontology.org/go#GO_0033269 label: internode region of axon + SubClassOf('internode region of axon' ObjectSomeValueFrom('part_of' 'main axon')) + SubClassOf('internode region of axon' 'axon part') --- !New Class!: http://www.geneontology.org/go#GO_1901312 label: negative regulation of gene expression involved in extracellular matrix organization + SubClassOf('negative regulation of gene expression involved in extracellular matrix organization' 'negative regulation of gene expression') + SubClassOf('negative regulation of gene expression involved in extracellular matrix organization' ObjectSomeValueFrom('negatively_regulates' 'gene expression involved in extracellular matrix organization')) + EquivalentClasses('negative regulation of gene expression involved in extracellular matrix organization' ObjectSomeValueFrom('negatively_regulates' 'gene expression involved in extracellular matrix organization') ) + SubClassOf('negative regulation of gene expression involved in extracellular matrix organization' 'regulation of gene expression involved in extracellular matrix organization') --- !New Class!: http://www.geneontology.org/go#GO_0002132 label: wobble position uridine ribose methylation + SubClassOf('wobble position uridine ribose methylation' 'wobble position ribose methylation') --- !New Class!: http://www.geneontology.org/go#GO_0061158 label: 3'-UTR-mediated mRNA destabilization + SubClassOf('3'-UTR-mediated mRNA destabilization' 'mRNA destabilization') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_314146 label: Euarchontoglires + SubClassOf('Euarchontoglires' 'Eutheria') --- !New Class!: http://www.geneontology.org/go#GO_0009301 label: snRNA transcription + SubClassOf('snRNA transcription' 'transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0001143 label: mitochondrial RNA polymerase core promoter sequence-specific DNA binding transcription factor activity + SubClassOf('mitochondrial RNA polymerase core promoter sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding mitochondrial RNA polymerase transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0001140 label: bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription + SubClassOf('bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' 'bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity') + SubClassOf('bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' 'sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription') --- !New Class!: http://www.geneontology.org/go#GO_0035334 label: Notch receptor processing, ligand-independent + SubClassOf('Notch receptor processing, ligand-independent' 'protein processing') --- !New Class!: http://www.geneontology.org/go#GO_0035968 label: regulation of sterol import by regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of sterol import by regulation of transcription from RNA polymerase II promoter' 'regulation of lipid transport by regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of sterol import by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) --- !New Class!: http://www.geneontology.org/go#MOD_01048 label: 2-pyrrolidone-5-carboxylic acid + SubClassOf('2-pyrrolidone-5-carboxylic acid' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#GO_0039657 label: suppression by virus of host gene expression + SubClassOf('suppression by virus of host gene expression' 'negative regulation of gene expression') + SubClassOf('suppression by virus of host gene expression' 'modulation by virus of host gene expression') --- !New Class!: http://www.geneontology.org/go#GO_1902097 label: positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium + SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium' 'positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium' ) --- !New Class!: http://www.geneontology.org/go#GO_0001024 label: transcription initiation from RNA polymerase III type 3 promoter + SubClassOf('transcription initiation from RNA polymerase III type 3 promoter' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase III type 3 promoter')) + SubClassOf('transcription initiation from RNA polymerase III type 3 promoter' 'transcription initiation from RNA polymerase III promoter') --- !New Class!: http://www.geneontology.org/go#GO_0000432 label: positive regulation of transcription from RNA polymerase II promoter by glucose + SubClassOf('positive regulation of transcription from RNA polymerase II promoter by glucose' 'regulation of transcription from RNA polymerase II promoter by glucose') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter by glucose' 'carbon catabolite activation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter by glucose' 'positive regulation of transcription by glucose') --- !New Class!: http://www.geneontology.org/go#GO_1900375 label: positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0034963 label: box C/D snoRNA processing + SubClassOf('box C/D snoRNA processing' 'snoRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0034231 label: islet amyloid polypeptide processing + SubClassOf('islet amyloid polypeptide processing' 'peptide hormone processing') --- !New Class!: http://www.geneontology.org/go#GO_0097393 label: telomeric RNA transcription + SubClassOf('telomeric RNA transcription' 'transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0072670 label: mitochondrial tRNA threonylcarbamoyladenosine modification + SubClassOf('mitochondrial tRNA threonylcarbamoyladenosine modification' 'mitochondrial tRNA modification') --- !New Class!: http://www.geneontology.org/go#GO_0046782 label: regulation of viral transcription + SubClassOf('regulation of viral transcription' ObjectSomeValueFrom('regulates' 'viral transcription')) + SubClassOf('regulation of viral transcription' 'regulation of gene expression') + EquivalentClasses('regulation of viral transcription' ObjectSomeValueFrom('regulates' 'viral transcription') ) --- !New Class!: http://www.geneontology.org/go#GO_0044309 label: neuron spine + SubClassOf('neuron spine' 'neuron projection') --- !New Class!: http://www.geneontology.org/go#GO_0034402 label: recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex + SubClassOf('recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex' ObjectSomeValueFrom('part_of' 'mRNA 3'-end processing')) --- !New Class!: http://www.geneontology.org/go#GO_0031425 label: chloroplast RNA processing + SubClassOf('chloroplast RNA processing' 'RNA processing') --- !New Class!: http://www.geneontology.org/go#SO_0001037 label: mobile_genetic_element + SubClassOf('mobile_genetic_element' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_1900389 label: regulation of glucose import by regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of glucose import by regulation of transcription from RNA polymerase II promoter' ) + SubClassOf('regulation of glucose import by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0031439 label: positive regulation of mRNA cleavage + SubClassOf('positive regulation of mRNA cleavage' 'positive regulation of mRNA processing') + SubClassOf('positive regulation of mRNA cleavage' ObjectSomeValueFrom('positively_regulates' 'mRNA cleavage')) + EquivalentClasses('positive regulation of mRNA cleavage' ObjectSomeValueFrom('positively_regulates' 'mRNA cleavage') ) + SubClassOf('positive regulation of mRNA cleavage' 'regulation of mRNA cleavage') --- !New Class!: http://www.geneontology.org/go#GO_0072367 label: regulation of lipid transport by regulation of transcription from RNA polymerase II promoter + EquivalentClasses('regulation of lipid transport by regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcription from RNA polymerase II promoter') ) + SubClassOf('regulation of lipid transport by regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0001072 label: RNA binding transcription antitermination factor activity + SubClassOf('RNA binding transcription antitermination factor activity' ObjectSomeValueFrom('part_of' 'transcription antitermination')) --- !New Class!: http://www.geneontology.org/go#GO_0060342 label: photoreceptor inner segment membrane + SubClassOf('photoreceptor inner segment membrane' ObjectSomeValueFrom('part_of' 'photoreceptor inner segment')) + SubClassOf('photoreceptor inner segment membrane' 'neuron part') --- !New Class!: http://www.geneontology.org/go#GO_0010495 label: long-distance posttranscriptional gene silencing + SubClassOf('long-distance posttranscriptional gene silencing' 'posttranscriptional gene silencing') --- !New Class!: http://www.geneontology.org/go#GO_0001028 label: RNA polymerase III type 2 promoter TFIIIB-type transcription factor activity + SubClassOf('RNA polymerase III type 2 promoter TFIIIB-type transcription factor activity' 'TFIIIB-type transcription factor activity') + SubClassOf('RNA polymerase III type 2 promoter TFIIIB-type transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III type 2 promoter transcriptional preinitiation complex assembly')) --- !New Class!: http://www.geneontology.org/go#GO_0000349 label: generation of catalytic spliceosome for first transesterification step + SubClassOf('generation of catalytic spliceosome for first transesterification step' ObjectSomeValueFrom('part_of' 'spliceosomal conformational changes to generate catalytic conformation')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000185 label: LymphocyteRichHL + SubClassOf('LymphocyteRichHL' 'HodgkinLymphoma') --- !New Class!: http://www.geneontology.org/go#OMIT_0000210 label: MalignantThymoma + SubClassOf('MalignantThymoma' 'Carcinoma') --- !New Class!: http://www.geneontology.org/go#GO_0031123 label: RNA 3'-end processing + EquivalentClasses('mitochondrial RNA 3'-end processing' 'RNA 3'-end processing' ) + SubClassOf('RNA 3'-end processing' 'RNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0000900 label: translation repressor activity, nucleic acid binding + SubClassOf('translation repressor activity, nucleic acid binding' 'translation regulator activity, nucleic acid binding') + SubClassOf('translation repressor activity, nucleic acid binding' 'translation repressor activity') --- !New Class!: http://www.geneontology.org/go#SO_0001640 label: RNase_MRP_RNA_gene + SubClassOf('RNase_MRP_RNA_gene' 'ncRNA_gene') --- !New Class!: http://www.geneontology.org/go#GO_0001205 label: RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription + SubClassOf('RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' 'RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription') + SubClassOf('RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription' 'RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_314295 label: Hominoidea + SubClassOf('Hominoidea' 'Catarrhini') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_0000408 label: UnclassifiedMammalia + SubClassOf('UnclassifiedMammalia' 'Mammalia') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_0000414 label: Dipnotetrapodomorpha + SubClassOf('Dipnotetrapodomorpha' 'Sarcopterygii') --- !New Class!: http://www.geneontology.org/go#GO_0001178 label: regulation of transcriptional start site selection at RNA polymerase II promoter + SubClassOf('regulation of transcriptional start site selection at RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcriptional start site selection at RNA polymerase II promoter')) + EquivalentClasses('regulation of transcriptional start site selection at RNA polymerase II promoter' ObjectSomeValueFrom('regulates' 'transcriptional start site selection at RNA polymerase II promoter') ) + SubClassOf('regulation of transcriptional start site selection at RNA polymerase II promoter' 'regulation of transcription initiation from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0033267 label: axon part + EquivalentClasses('axon part' ObjectIntersectionOf('cellular_component' ObjectSomeValueFrom('part_of' 'axon')) ) + SubClassOf('axon part' 'neuron part') + SubClassOf('axon part' ObjectSomeValueFrom('part_of' 'axon')) --- !New Class!: http://www.geneontology.org/go#GO_0033413 label: UGU codon-amino acid adaptor activity + SubClassOf('UGU codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_9606 label: Homo sapiens + SubClassOf('Homo sapiens' 'Homo') --- !New Class!: http://www.geneontology.org/go#GO_1901195 label: positive regulation of formation of translation preinitiation complex + SubClassOf('positive regulation of formation of translation preinitiation complex' 'regulation of formation of translation preinitiation complex') + SubClassOf('positive regulation of formation of translation preinitiation complex' ObjectSomeValueFrom('positively_regulates' 'formation of translation preinitiation complex')) + EquivalentClasses('positive regulation of formation of translation preinitiation complex' ObjectSomeValueFrom('positively_regulates' 'formation of translation preinitiation complex') ) --- !New Class!: http://www.geneontology.org/go#GO_0006383 label: transcription from RNA polymerase III promoter + SubClassOf('transcription from RNA polymerase III promoter' 'transcription, DNA-dependent') --- !New Class!: http://www.geneontology.org/go#GO_0034247 label: snoRNA splicing + SubClassOf('snoRNA splicing' 'snoRNA processing') + SubClassOf('snoRNA splicing' 'RNA splicing') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_6072 label: Eumetazoa + SubClassOf('Eumetazoa' 'Metazoa') --- !New Class!: http://www.geneontology.org/go#GO_0006426 label: glycyl-tRNA aminoacylation + EquivalentClasses('glycyl-tRNA aminoacylation' 'mitochondrial glycyl-tRNA aminoacylation' ) + SubClassOf('glycyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') --- !New Class!: http://www.geneontology.org/go#GO_1900247 label: regulation of cytoplasmic translational elongation + SubClassOf('regulation of cytoplasmic translational elongation' 'regulation of translational elongation') + SubClassOf('regulation of cytoplasmic translational elongation' ObjectSomeValueFrom('regulates' 'cytoplasmic translational elongation')) + EquivalentClasses('regulation of cytoplasmic translational elongation' ObjectSomeValueFrom('regulates' 'cytoplasmic translational elongation') ) + SubClassOf('regulation of cytoplasmic translational elongation' 'regulation of cytoplasmic translation') --- !New Class!: http://www.geneontology.org/go#GO_0034474 label: U2 snRNA 3'-end processing + SubClassOf('U2 snRNA 3'-end processing' 'snRNA 3'-end processing') --- !New Class!: http://www.geneontology.org/go#PR_000018264 label: proteolytic cleavage product + SubClassOf('proteolytic cleavage product' 'amino acid chain') --- !New Class!: http://www.geneontology.org/go#OMIT_0000229 label: AnalgesicTreatment + SubClassOf('AnalgesicTreatment' 'PharmaceuticalTreatment') --- !New Class!: http://www.geneontology.org/go#GO_0045943 label: positive regulation of transcription from RNA polymerase I promoter + EquivalentClasses('positive regulation of transcription from RNA polymerase I promoter' 'positive regulation of transcription from RNA polymerase I promoter during mitosis' ) + SubClassOf('positive regulation of transcription from RNA polymerase I promoter' 'positive regulation of transcription, DNA-dependent') + EquivalentClasses('positive regulation of transcription from RNA polymerase I promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase I promoter') ) + SubClassOf('positive regulation of transcription from RNA polymerase I promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase I promoter')) + SubClassOf('positive regulation of transcription from RNA polymerase I promoter' 'regulation of transcription from RNA polymerase I promoter') --- !New Class!: http://www.geneontology.org/go#SO_0001265 label: miRNA_gene + SubClassOf('miRNA_gene' 'ncRNA_gene') --- !New Class!: http://www.geneontology.org/go#OMIT_0000327 label: Epidermis + SubClassOf('Epidermis' 'Skin') --- !New Class!: http://www.geneontology.org/go#GO_0044644 label: envenomation resulting in negative regulation of complement activation, alternative pathway in other organism + SubClassOf('envenomation resulting in negative regulation of complement activation, alternative pathway in other organism' 'envenomation resulting in modulation of complement activation, alternative pathway in other organism') + SubClassOf('envenomation resulting in negative regulation of complement activation, alternative pathway in other organism' ObjectSomeValueFrom('has_part' 'negative regulation of complement activation, alternative pathway in other organism')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000108 label: CardiacMuscle + SubClassOf('CardiacMuscle' 'MuscleTissue') --- !New Class!: http://www.geneontology.org/go#SO_0000378 label: DsrA_RNA + SubClassOf('DsrA_RNA' 'small_regulatory_ncRNA') --- !New Class!: http://www.geneontology.org/go#GO_0001970 label: positive regulation of activation of membrane attack complex + SubClassOf('positive regulation of activation of membrane attack complex' 'positive regulation of complement activation') + SubClassOf('positive regulation of activation of membrane attack complex' 'regulation of activation of membrane attack complex') --- !New Class!: http://www.geneontology.org/go#GO_0039605 label: TFIIB-class transcription factor binding involved in viral suppression of host transcription initiation from RNA polymerase II promoter + SubClassOf('TFIIB-class transcription factor binding involved in viral suppression of host transcription initiation from RNA polymerase II promoter' ObjectSomeValueFrom('part_of' 'suppression by virus of host transcription initiation from RNA polymerase II promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0097235 label: positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0097341 label: zymogen inhibition + SubClassOf('zymogen inhibition' 'negative regulation of protein processing') --- !New Class!: http://www.geneontology.org/go#GO_0035391 label: maintenance of chromatin silencing at silent mating-type cassette + SubClassOf('maintenance of chromatin silencing at silent mating-type cassette' ObjectSomeValueFrom('part_of' 'chromatin silencing at silent mating-type cassette')) + SubClassOf('maintenance of chromatin silencing at silent mating-type cassette' 'maintenance of chromatin silencing') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_0000430 label: UnclassifiedChordata + SubClassOf('UnclassifiedChordata' 'Chordata') --- !New Class!: http://www.geneontology.org/go#GO_2000233 label: negative regulation of rRNA processing + SubClassOf('negative regulation of rRNA processing' ObjectSomeValueFrom('negatively_regulates' 'rRNA processing')) + SubClassOf('negative regulation of rRNA processing' 'regulation of rRNA processing') + EquivalentClasses('negative regulation of rRNA processing' ObjectSomeValueFrom('negatively_regulates' 'rRNA processing') ) --- !New Class!: http://www.geneontology.org/go#GO_0045959 label: negative regulation of complement activation, classical pathway + SubClassOf('negative regulation of complement activation, classical pathway' 'negative regulation of complement activation') + SubClassOf('negative regulation of complement activation, classical pathway' 'regulation of complement activation, classical pathway') --- !New Class!: http://www.geneontology.org/go#OMIT_0000066 label: BLymphocytes + SubClassOf('BLymphocytes' 'Lymphocytes') --- !New Class!: http://www.geneontology.org/go#GO_0052665 label: tRNA (uracil-2'-O-)-methyltransferase activity + SubClassOf('tRNA (uracil-2'-O-)-methyltransferase activity' 'tRNA (uracil) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000215 label: PulmonarySarcomatoidOrPleomorphicCarcinoma + SubClassOf('PulmonarySarcomatoidOrPleomorphicCarcinoma' 'Carcinoma') --- !New Class!: http://www.geneontology.org/go#GO_0044641 label: envenomation resulting in positive regulation of complement activation, lectin pathway in other organism + SubClassOf('envenomation resulting in positive regulation of complement activation, lectin pathway in other organism' ObjectSomeValueFrom('has_part' 'positive regulation of complement activation, lectin pathway in other organism')) + SubClassOf('envenomation resulting in positive regulation of complement activation, lectin pathway in other organism' 'envenomation resulting in modulation of complement activation, lectin pathway in other organism') --- !New Class!: http://www.geneontology.org/go#GO_0038056 label: negative regulation of BMP signaling pathway by negative regulation of BMP secretion + SubClassOf('negative regulation of BMP signaling pathway by negative regulation of BMP secretion' 'negative regulation of BMP signaling pathway') + EquivalentClasses('negative regulation of BMP signaling pathway by negative regulation of BMP secretion' ObjectSomeValueFrom('negatively_regulates' 'BMP signaling pathway') ) --- !New Class!: http://www.geneontology.org/go#GO_1901192 label: positive regulation of formation of translation initiation ternary complex + EquivalentClasses('positive regulation of formation of translation initiation ternary complex' ObjectSomeValueFrom('positively_regulates' 'formation of translation initiation ternary complex') ) + SubClassOf('positive regulation of formation of translation initiation ternary complex' 'regulation of formation of translation initiation ternary complex') + SubClassOf('positive regulation of formation of translation initiation ternary complex' ObjectSomeValueFrom('positively_regulates' 'formation of translation initiation ternary complex')) --- !New Class!: http://www.geneontology.org/go#GO_0000472 label: endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) + SubClassOf('endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'rRNA 5'-end processing') + SubClassOf('endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' ObjectSomeValueFrom('part_of' 'maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)')) + SubClassOf('endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)' 'endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)') --- !New Class!: http://www.geneontology.org/go#MOD_00438 label: myristoylated residue + SubClassOf('myristoylated residue' 'post-translationally modified amino-acid residue') --- !New Class!: http://www.geneontology.org/go#SO_0001740 label: gene_with_start_codon_CUG + SubClassOf('gene_with_start_codon_CUG' 'gene_with_non_canonical_start_codon') --- !New Class!: http://www.geneontology.org/go#GO_0045292 label: mRNA cis splicing, via spliceosome + SubClassOf('mRNA cis splicing, via spliceosome' 'mRNA splicing, via spliceosome') --- !New Class!: http://www.geneontology.org/go#GO_0042348 label: NF-kappaB import into nucleus + SubClassOf('NF-kappaB import into nucleus' ObjectSomeValueFrom('part_of' 'I-kappaB kinase/NF-kappaB cascade')) --- !New Class!: http://www.geneontology.org/go#GO_0042792 label: rRNA transcription from mitochondrial promoter + SubClassOf('rRNA transcription from mitochondrial promoter' 'transcription from mitochondrial promoter') + SubClassOf('rRNA transcription from mitochondrial promoter' 'rRNA transcription') --- !New Class!: http://www.geneontology.org/go#GO_0001128 label: RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly + SubClassOf('RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly' ObjectSomeValueFrom('part_of' 'RNA polymerase II transcriptional preinitiation complex assembly')) + SubClassOf('RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly' 'RNA polymerase II transcription coactivator activity') --- !New Class!: http://www.geneontology.org/go#GO_0003886 label: DNA (cytosine-5-)-methyltransferase activity + SubClassOf('DNA (cytosine-5-)-methyltransferase activity' 'DNA-methyltransferase activity') + SubClassOf('DNA (cytosine-5-)-methyltransferase activity' ObjectSomeValueFrom('part_of' 'C-5 methylation of cytosine')) --- !New Class!: http://www.geneontology.org/go#GO_0030425 label: dendrite + SubClassOf('dendrite' 'neuron projection') --- !New Class!: http://www.geneontology.org/go#GO_0000348 label: mRNA branch site recognition + SubClassOf('mRNA branch site recognition' ObjectSomeValueFrom('part_of' 'spliceosomal complex assembly')) --- !New Class!: http://www.geneontology.org/go#GO_0036083 label: positive regulation of unsaturated fatty acid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of unsaturated fatty acid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of unsaturated fatty acid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) + SubClassOf('positive regulation of unsaturated fatty acid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0061420 label: regulation of transcription from RNA polymerase II promoter in response to biotin starvation + SubClassOf('regulation of transcription from RNA polymerase II promoter in response to biotin starvation' 'regulation of transcription from RNA polymerase II promoter in response to stress') --- !New Class!: http://www.geneontology.org/go#GO_0060469 label: positive regulation of transcription involved in egg activation + SubClassOf('positive regulation of transcription involved in egg activation' 'positive regulation of transcription, DNA-dependent') + EquivalentClasses('positive regulation of transcription, DNA-dependent' 'positive regulation of transcription involved in egg activation' ) --- !New Class!: http://www.geneontology.org/go#GO_0071042 label: nuclear polyadenylation-dependent mRNA catabolic process + SubClassOf('nuclear polyadenylation-dependent mRNA catabolic process' 'polyadenylation-dependent mRNA catabolic process') --- !New Class!: http://www.geneontology.org/go#snap_IndependentContinuant label: independent_continuant + EquivalentClasses('independent_continuant' ObjectUnionOf('material_entity' 'object_boundary' 'site') ) + SubClassOf('independent_continuant' 'continuant') + DisjointClasses('independent_continuant' 'spatial_region') + DisjointClasses('dependent_continuant' 'independent_continuant') --- !New Class!: http://www.geneontology.org/go#SO_0000384 label: OxyS_RNA + SubClassOf('OxyS_RNA' 'small_regulatory_ncRNA') --- !New Class!: http://www.geneontology.org/go#OMIT_0000150 label: ConnectiveOrigin + SubClassOf('ConnectiveOrigin' 'BenignNeoplasm') --- !New Class!: http://www.geneontology.org/go#SO_0001267 label: snoRNA_gene + SubClassOf('snoRNA_gene' 'ncRNA_gene') --- !New Class!: http://www.geneontology.org/go#GO_0070129 label: regulation of mitochondrial translation + SubClassOf('regulation of mitochondrial translation' ObjectSomeValueFrom('regulates' 'mitochondrial translation')) + SubClassOf('regulation of mitochondrial translation' 'regulation of translation') + EquivalentClasses('regulation of mitochondrial translation' ObjectSomeValueFrom('regulates' 'mitochondrial translation') ) --- !New Class!: http://www.geneontology.org/go#GO_0061424 label: positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000371 label: Larynx + SubClassOf('Larynx' 'UpperRespiratoryTract') --- !New Class!: http://www.geneontology.org/go#GO_0045945 label: positive regulation of transcription from RNA polymerase III promoter + EquivalentClasses('positive regulation of transcription from RNA polymerase III promoter' 'positive regulation of transcription from RNA polymerase III promoter during mitosis' ) + EquivalentClasses('positive regulation of transcription from RNA polymerase III promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase III promoter') ) + SubClassOf('positive regulation of transcription from RNA polymerase III promoter' 'positive regulation of transcription, DNA-dependent') + SubClassOf('positive regulation of transcription from RNA polymerase III promoter' 'regulation of transcription from RNA polymerase III promoter') + SubClassOf('positive regulation of transcription from RNA polymerase III promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase III promoter')) --- !New Class!: http://www.geneontology.org/go#GO_0071046 label: nuclear polyadenylation-dependent ncRNA catabolic process + SubClassOf('nuclear polyadenylation-dependent ncRNA catabolic process' 'polyadenylation-dependent ncRNA catabolic process') --- !New Class!: http://www.geneontology.org/go#GO_0061216 label: regulation of transcription from RNA polymerase II promoter involved in mesonephros development + EquivalentClasses('regulation of transcription from RNA polymerase II promoter' 'regulation of transcription from RNA polymerase II promoter involved in mesonephros development' ) + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in mesonephros development' 'regulation of transcription from RNA polymerase II promoter involved in kidney development') --- !New Class!: http://www.geneontology.org/go#OMIT_0000068 label: TLymphocytes + SubClassOf('TLymphocytes' 'Lymphocytes') --- !New Class!: http://www.geneontology.org/go#GO_0039561 label: suppression by virus of host IRF9 activity by positive regulation of IRF9 localization to nucleus + SubClassOf('suppression by virus of host IRF9 activity by positive regulation of IRF9 localization to nucleus' 'suppression by virus of host IRF9 activity') --- !New Class!: http://www.geneontology.org/go#GO_0043196 label: varicosity + SubClassOf('varicosity' 'axon part') + SubClassOf('varicosity' ObjectSomeValueFrom('part_of' 'main axon')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000115 label: MiRNABinding + SubClassOf('MiRNABinding' ObjectSomeValueFrom('hasValidation' 'ExperimentalValidation')) + SubClassOf('MiRNABinding' 'biological_process') + SubClassOf('MiRNABinding' ObjectSomeValueFrom('hasMiRNA' 'miRNA')) + SubClassOf('MiRNABinding' ObjectSomeValueFrom('involvedInEvent' 'processual_entity')) + SubClassOf('MiRNABinding' ObjectSomeValueFrom('hasTarget' 'gene')) + SubClassOf('MiRNABinding' ObjectSomeValueFrom('hasPrediction' 'gene')) --- !New Class!: http://www.geneontology.org/go#GO_0045896 label: regulation of transcription during mitosis + SubClassOf('regulation of transcription during mitosis' 'regulation of transcription, DNA-dependent') + EquivalentClasses('regulation of transcription, DNA-dependent' 'regulation of transcription during mitosis' ) --- !New Class!: http://www.geneontology.org/go#GO_0048097 label: long-term maintenance of gene activation + SubClassOf('long-term maintenance of gene activation' 'positive regulation of gene expression, epigenetic') --- !New Class!: http://www.geneontology.org/go#GO_0060807 label: regulation of transcription from RNA polymerase II promoter involved in definitive endodermal cell fate specification + SubClassOf('regulation of transcription from RNA polymerase II promoter involved in definitive endodermal cell fate specification' 'regulation of transcription involved in primary germ layer cell fate commitment') --- !New Class!: http://www.geneontology.org/go#SO_0000711 label: gene_with_mRNA_recoded_by_translational_bypass + SubClassOf('gene_with_mRNA_recoded_by_translational_bypass' 'gene_with_recoded_mRNA') --- !New Class!: http://www.geneontology.org/go#NCBITaxon_10219 label: Hemichordata + SubClassOf('Hemichordata' 'Deuterostomia') --- !New Class!: http://www.geneontology.org/go#GO_0001029 label: RNA polymerase III type 3 promoter TFIIIB-type transcription factor activity + SubClassOf('RNA polymerase III type 3 promoter TFIIIB-type transcription factor activity' ObjectSomeValueFrom('part_of' 'RNA polymerase III type 3 promoter transcriptional preinitiation complex assembly')) + SubClassOf('RNA polymerase III type 3 promoter TFIIIB-type transcription factor activity' 'TFIIIB-type transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0001058 label: RNA polymerase V activity + SubClassOf('RNA polymerase V activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase V promoter')) + EquivalentClasses('RNA polymerase V activity' ObjectSomeValueFrom('part_of' 'transcription from RNA polymerase V promoter') ) --- !New Class!: http://www.geneontology.org/go#GO_0097414 label: classical Lewy body + SubClassOf('classical Lewy body' 'Lewy body') --- !New Class!: http://www.geneontology.org/go#SO_0000842 label: gene_component_region + SubClassOf('gene_component_region' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_1902375 label: nuclear tRNA 3'-trailer cleavage, endonucleolytic + EquivalentClasses('tRNA 3'-trailer cleavage, endonucleolytic' 'nuclear tRNA 3'-trailer cleavage, endonucleolytic' ) + SubClassOf('nuclear tRNA 3'-trailer cleavage, endonucleolytic' 'tRNA 3'-trailer cleavage, endonucleolytic') --- !New Class!: http://www.geneontology.org/go#GO_0048787 label: presynaptic active zone membrane + SubClassOf('presynaptic active zone membrane' ObjectSomeValueFrom('part_of' 'presynaptic active zone')) + SubClassOf('presynaptic active zone membrane' 'presynaptic membrane') --- !New Class!: http://www.geneontology.org/go#SO_0000871 label: polyadenylated_mRNA + SubClassOf('polyadenylated_mRNA' 'mRNA') --- !New Class!: http://www.geneontology.org/go#GO_1900465 label: negative regulation of arginine catabolic process by negative regulation of transcription from RNA polymerase II promoter + SubClassOf('negative regulation of arginine catabolic process by negative regulation of transcription from RNA polymerase II promoter' 'regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of arginine catabolic process by negative regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#SO_1001275 label: retron + SubClassOf('retron' 'biological_region') --- !New Class!: http://www.geneontology.org/go#GO_0052914 label: 16S rRNA (guanine(1207)-N(2))-methyltransferase activity + SubClassOf('16S rRNA (guanine(1207)-N(2))-methyltransferase activity' 'rRNA (guanine-N2-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0045893 label: positive regulation of transcription, DNA-dependent + EquivalentClasses('positive regulation of transcription, DNA-dependent' 'positive regulation of transcription during mitosis' ) + SubClassOf('positive regulation of transcription, DNA-dependent' 'regulation of transcription, DNA-dependent') + EquivalentClasses('positive regulation of transcription, DNA-dependent' 'positive regulation of transcription involved in egg activation' ) + EquivalentClasses('positive regulation of transcription on exit from mitosis' 'positive regulation of transcription, DNA-dependent' ) + EquivalentClasses('positive regulation of transcription, DNA-dependent' 'positive regulation of transcription involved in G2/M transition of mitotic cell cycle' ) + EquivalentClasses('positive regulation of transcription, DNA-dependent' ObjectSomeValueFrom('positively_regulates' 'transcription, DNA-dependent') ) + SubClassOf('positive regulation of transcription, DNA-dependent' 'positive regulation of gene expression') + SubClassOf('positive regulation of transcription, DNA-dependent' ObjectSomeValueFrom('positively_regulates' 'transcription, DNA-dependent')) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_193537 label: Centroheliozoa + SubClassOf('Centroheliozoa' 'Eukaryota') --- !New Class!: http://www.geneontology.org/go#GO_0045905 label: positive regulation of translational termination + EquivalentClasses('positive regulation of translational termination' ObjectSomeValueFrom('positively_regulates' 'translational termination') ) + SubClassOf('positive regulation of translational termination' 'positive regulation of translation') + SubClassOf('positive regulation of translational termination' ObjectSomeValueFrom('positively_regulates' 'translational termination')) + SubClassOf('positive regulation of translational termination' 'regulation of translational termination') --- !New Class!: http://www.geneontology.org/go#GO_0061399 label: positive regulation of transcription from RNA polymerase II promoter in response to cobalt ion + SubClassOf('positive regulation of transcription from RNA polymerase II promoter in response to cobalt ion' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#SO_0000995 label: consensus_mRNA + SubClassOf('consensus_mRNA' 'mRNA') --- !New Class!: http://www.geneontology.org/go#OMIT_0000368 label: Bronchi + SubClassOf('Bronchi' 'LowerRespiratoryTract') --- !New Class!: http://www.geneontology.org/go#SO_0000095 label: leucoplast_gene + SubClassOf('leucoplast_gene' 'plastid_gene') --- !New Class!: http://www.geneontology.org/go#GO_0039611 label: suppression by virus of host translation initiation factor activity + SubClassOf('suppression by virus of host translation initiation factor activity' 'suppression by virus of host translation initiation') --- !New Class!: http://www.geneontology.org/go#GO_0061427 label: negative regulation of ceramide biosynthetic process by negative regulation of transcription from RNA Polymerase II promoter + SubClassOf('negative regulation of ceramide biosynthetic process by negative regulation of transcription from RNA Polymerase II promoter' 'negative regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('negative regulation of transcription from RNA polymerase II promoter' 'negative regulation of ceramide biosynthetic process by negative regulation of transcription from RNA Polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0000375 label: RNA splicing, via transesterification reactions + SubClassOf('RNA splicing, via transesterification reactions' 'RNA splicing') --- !New Class!: http://www.geneontology.org/go#SO_0001639 label: RNase_P_RNA_gene + SubClassOf('RNase_P_RNA_gene' 'ncRNA_gene') --- !New Class!: http://www.geneontology.org/go#GO_0097447 label: dendritic tree + SubClassOf('dendritic tree' 'neuron part') + SubClassOf('dendritic tree' ObjectSomeValueFrom('has_part' 'dendrite')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000209 label: MalignantMesothelioma + SubClassOf('MalignantMesothelioma' 'Carcinoma') --- !New Class!: http://www.geneontology.org/go#GO_0009383 label: rRNA (cytosine-C5-)-methyltransferase activity + SubClassOf('rRNA (cytosine-C5-)-methyltransferase activity' 'rRNA (cytosine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#snap_SpatialRegion label: spatial_region + EquivalentClasses('spatial_region' ObjectUnionOf('one_dimensional_region' 'three_dimensional_region' 'two_dimensional_region' 'zero_dimensional_region') ) + DisjointClasses('independent_continuant' 'spatial_region') + SubClassOf('spatial_region' 'continuant') + DisjointClasses('dependent_continuant' 'spatial_region') --- !New Class!: http://www.geneontology.org/go#GO_0010629 label: negative regulation of gene expression + EquivalentClasses('negative regulation of gene expression' ObjectSomeValueFrom('negatively_regulates' 'gene expression') ) + SubClassOf('negative regulation of gene expression' ObjectSomeValueFrom('negatively_regulates' 'gene expression')) + SubClassOf('negative regulation of gene expression' 'regulation of gene expression') --- !New Class!: http://www.geneontology.org/go#GO_0033270 label: paranode region of axon + SubClassOf('paranode region of axon' 'axon part') + SubClassOf('paranode region of axon' ObjectSomeValueFrom('part_of' 'main axon')) --- !New Class!: http://www.geneontology.org/go#GO_1901191 label: negative regulation of formation of translation initiation ternary complex + SubClassOf('negative regulation of formation of translation initiation ternary complex' ObjectSomeValueFrom('negatively_regulates' 'formation of translation initiation ternary complex')) + SubClassOf('negative regulation of formation of translation initiation ternary complex' 'regulation of formation of translation initiation ternary complex') + EquivalentClasses('negative regulation of formation of translation initiation ternary complex' ObjectSomeValueFrom('negatively_regulates' 'formation of translation initiation ternary complex') ) --- !New Class!: http://www.geneontology.org/go#GO_0061186 label: negative regulation of chromatin silencing at silent mating-type cassette + EquivalentClasses('negative regulation of chromatin silencing at silent mating-type cassette' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing at silent mating-type cassette') ) + SubClassOf('negative regulation of chromatin silencing at silent mating-type cassette' 'negative regulation of chromatin silencing') + SubClassOf('negative regulation of chromatin silencing at silent mating-type cassette' ObjectSomeValueFrom('negatively_regulates' 'chromatin silencing at silent mating-type cassette')) + SubClassOf('negative regulation of chromatin silencing at silent mating-type cassette' 'regulation of chromatin silencing at silent mating-type cassette') --- !New Class!: http://www.geneontology.org/go#GO_2000825 label: positive regulation of androgen receptor activity + SubClassOf('positive regulation of androgen receptor activity' 'positive regulation of sequence-specific DNA binding transcription factor activity') + EquivalentClasses('positive regulation of androgen receptor activity' ObjectSomeValueFrom('positively_regulates' 'androgen receptor activity') ) + SubClassOf('positive regulation of androgen receptor activity' ObjectSomeValueFrom('positively_regulates' 'androgen receptor activity')) + SubClassOf('positive regulation of androgen receptor activity' 'regulation of androgen receptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0000409 label: regulation of transcription by galactose + SubClassOf('regulation of transcription by galactose' 'carbon catabolite regulation of transcription') --- !New Class!: http://www.geneontology.org/go#GO_0007357 label: positive regulation of central gap gene transcription + SubClassOf('positive regulation of central gap gene transcription' 'positive regulation of transcription from RNA polymerase II promoter') + SubClassOf('positive regulation of central gap gene transcription' 'regulation of transcription involved in anterior/posterior axis specification') --- !New Class!: http://www.geneontology.org/go#SO_0001226 label: gene_silenced_by_histone_methylation + SubClassOf('gene_silenced_by_histone_methylation' 'gene_silenced_by_histone_modification') --- !New Class!: http://www.geneontology.org/go#OMIT_0000295 label: SuperiorVenaCava + SubClassOf('SuperiorVenaCava' 'VenaCava') --- !New Class!: http://www.geneontology.org/go#GO_0022417 label: protein maturation by protein folding + SubClassOf('protein maturation by protein folding' 'protein maturation') --- !New Class!: http://www.geneontology.org/go#GO_0006396 label: RNA processing + EquivalentClasses('mitochondrial RNA processing' 'RNA processing' ) + SubClassOf('RNA processing' ObjectSomeValueFrom('part_of' 'gene expression')) --- !New Class!: http://www.geneontology.org/go#GO_0001131 label: bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity + SubClassOf('bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0001199 label: metal ion regulated sequence-specific DNA binding transcription factor activity + SubClassOf('metal ion regulated sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding transcription factor activity') --- !New Class!: http://www.geneontology.org/go#OMIT_0000226 label: PhysicalTherapy + SubClassOf('PhysicalTherapy' 'Treatment') --- !New Class!: http://www.geneontology.org/go#GO_0016428 label: tRNA (cytosine-5-)-methyltransferase activity + SubClassOf('tRNA (cytosine-5-)-methyltransferase activity' 'tRNA (cytosine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0003257 label: positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation + SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation' 'regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation') + SubClassOf('positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation' 'positive regulation of transcription from RNA polymerase II promoter involved in heart development') + EquivalentClasses('positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation' 'positive regulation of transcription from RNA polymerase II promoter' ) --- !New Class!: http://www.geneontology.org/go#GO_0001169 label: RNA polymerase I CORE element sequence-specific DNA binding transcription factor activity + SubClassOf('RNA polymerase I CORE element sequence-specific DNA binding transcription factor activity' 'sequence-specific DNA binding RNA polymerase I transcription factor activity') --- !New Class!: http://www.geneontology.org/go#GO_0052666 label: tRNA (cytosine-2'-O-)-methyltransferase activity + SubClassOf('tRNA (cytosine-2'-O-)-methyltransferase activity' 'tRNA (cytosine) methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0060569 label: positive regulation of peptide hormone processing + SubClassOf('positive regulation of peptide hormone processing' ObjectSomeValueFrom('positively_regulates' 'peptide hormone processing')) + SubClassOf('positive regulation of peptide hormone processing' 'positive regulation of protein processing') + SubClassOf('positive regulation of peptide hormone processing' 'regulation of peptide hormone processing') + EquivalentClasses('positive regulation of peptide hormone processing' ObjectSomeValueFrom('positively_regulates' 'peptide hormone processing') ) --- !New Class!: http://www.geneontology.org/go#NCBITaxon_8287 label: Sarcopterygii + SubClassOf('Sarcopterygii' 'Euteleostomi') --- !New Class!: http://www.geneontology.org/go#GO_0030426 label: growth cone + SubClassOf('growth cone' 'neuron part') + SubClassOf('growth cone' ObjectSomeValueFrom('part_of' 'neuron projection')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000266 label: PulmonaryArteries + SubClassOf('PulmonaryArteries' 'Artery') --- !New Class!: http://www.geneontology.org/go#GO_0031591 label: wybutosine biosynthetic process + SubClassOf('wybutosine biosynthetic process' 'tRNA modification') --- !New Class!: http://www.geneontology.org/go#GO_0052910 label: 23S rRNA (adenine(2085)-N(6))-dimethyltransferase activity + SubClassOf('23S rRNA (adenine(2085)-N(6))-dimethyltransferase activity' 'rRNA (adenine-N6-)-methyltransferase activity') --- !New Class!: http://www.geneontology.org/go#GO_0072363 label: regulation of glycolysis by positive regulation of transcription from RNA polymerase II promoter + SubClassOf('regulation of glycolysis by positive regulation of transcription from RNA polymerase II promoter' 'regulation of glycolysis by regulation of transcription from RNA polymerase II promoter') + EquivalentClasses('regulation of glycolysis by positive regulation of transcription from RNA polymerase II promoter' ObjectSomeValueFrom('positively_regulates' 'transcription from RNA polymerase II promoter') ) + SubClassOf('regulation of glycolysis by positive regulation of transcription from RNA polymerase II promoter' 'positive regulation of transcription from RNA polymerase II promoter') --- !New Class!: http://www.geneontology.org/go#GO_0006423 label: cysteinyl-tRNA aminoacylation + SubClassOf('cysteinyl-tRNA aminoacylation' 'tRNA aminoacylation for protein translation') + EquivalentClasses('cysteinyl-tRNA aminoacylation' 'mitochondrial cysteinyl-tRNA aminoacylation' ) --- !New Class!: http://www.geneontology.org/go#GO_0070919 label: production of siRNA involved in chromatin silencing by small RNA + SubClassOf('production of siRNA involved in chromatin silencing by small RNA' ObjectSomeValueFrom('part_of' 'chromatin silencing by small RNA')) + SubClassOf('production of siRNA involved in chromatin silencing by small RNA' 'production of small RNA involved in gene silencing by RNA') --- !New Class!: http://www.geneontology.org/go#GO_0042797 label: tRNA transcription from RNA polymerase III promoter + SubClassOf('tRNA transcription from RNA polymerase III promoter' 'transcription from RNA polymerase III promoter') + SubClassOf('tRNA transcription from RNA polymerase III promoter' 'tRNA transcription') --- !New Class!: http://www.geneontology.org/go#GO_0032543 label: mitochondrial translation + SubClassOf('mitochondrial translation' 'translation') + EquivalentClasses('translation' 'mitochondrial translation' ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000248 label: HematopoieiticOrgan + SubClassOf('HematopoieiticOrgan' 'AnatomicFeature') --- !New Class!: http://www.geneontology.org/go#GO_0031126 label: snoRNA 3'-end processing + SubClassOf('snoRNA 3'-end processing' 'ncRNA 3'-end processing') + SubClassOf('snoRNA 3'-end processing' 'snoRNA processing') --- !New Class!: http://www.geneontology.org/go#GO_0001112 label: DNA-dependent transcriptional open complex formation + SubClassOf('DNA-dependent transcriptional open complex formation' ObjectSomeValueFrom('part_of' 'DNA-dependent transcription, initiation')) --- !New Class!: http://www.geneontology.org/go#OMIT_0000054 label: ConnectiveTissueCell + SubClassOf('ConnectiveTissueCell' 'cell') --- !New Class!: http://www.geneontology.org/go#GO_0033446 label: AGC codon-amino acid adaptor activity + SubClassOf('AGC codon-amino acid adaptor activity' 'triplet codon-amino acid adaptor activity') --- !New Class!: http://www.geneontology.org/go#GO_0071619 label: phosphorylation of RNA polymerase II C-terminal domain serine 2 residues + SubClassOf('phosphorylation of RNA polymerase II C-terminal domain serine 2 residues' 'phosphorylation of RNA polymerase II C-terminal domain') --- !New Class!: http://www.geneontology.org/go#GO_0097464 label: thorny excrescence + SubClassOf('thorny excrescence' 'dendritic spine') --- !New Class!: http://www.geneontology.org/go#OMIT_0000323 label: BoneMarrow + SubClassOf('BoneMarrow' 'HematopoieiticOrgan') --- !New Class!: http://www.geneontology.org/go#snap_Function label: function + SubClassOf('function' 'realizable_entity') + DisjointClasses('disposition' 'function') + DisjointClasses('function' 'role') --- !New Class!: http://www.geneontology.org/go#GO_1901836 label: regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter + SubClassOf('regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' ObjectSomeValueFrom('regulates' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter')) + SubClassOf('regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' 'regulation of transcription from RNA polymerase I promoter') + EquivalentClasses('regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter' ObjectSomeValueFrom('regulates' 'transcription of nuclear large rRNA transcript from RNA polymerase I promoter') ) --- !New Class!: http://www.geneontology.org/go#OMIT_0000322 label: AdrenalMedulla + SubClassOf('AdrenalMedulla' 'SuprarenalGlands') --- !New Class!: http://www.geneontology.org/go#OMIT_0000042 label: Pathogenicity + SubClassOf('Pathogenicity' 'HarmfulRole') --- !New Class!: http://www.geneontology.org/go#SO_0001431 label: cryptic_gene + SubClassOf('cryptic_gene' 'gene') --- !New Class!: http://www.geneontology.org/go#GO_0044293 label: dendriole + SubClassOf('dendriole' 'dendrite terminus') --- !New Class!: http://www.geneontology.org/go#GO_0039548 label: suppression by virus of host IRF3 activity + SubClassOf('suppression by virus of host IRF3 activity' 'suppression by virus of host transcription')