format-version: 1.2 date: 04:06:2014 10:32 saved-by: cooperl auto-generated-by: OBO-Edit 2.3 default-namespace: plant_environment_ontology ontology: eo [Term] id: EO:0001001 name: plant treatment def: "A plant experimental condition (EO:0007359) or set of conditions describing the application of an abiotic (EO:0007191) or biotic plant treatment (EO:0007357) or the combinatorial application thereof." [PO:cooperl] xref: OBO_SF2_EO:48 is_a: EO:0007359 ! plant experimental condition created_by: cooperl creation_date: 2013-04-10T13:21:11Z [Term] id: EO:0001002 name: plant growth environment def: "A plant environment (EO:0007359) involving a plant treatment (EO:0001001), or a combination plant treatments, as well as natural conditions for plant growth." [PO:cooperl] synonym: "plant growing conditions" EXACT [] xref: OBO_SF2_EO:59 is_obsolete: true created_by: cooperl creation_date: 2013-04-10T13:28:27Z [Term] id: EO:0001003 name: organic chemical treatment def: "A chemical treatment (EO:0007189) involving the application of organic chemical(s)." [PO:cooperl] xref: OBO_SF2_EO:55 is_a: EO:0007189 ! chemical treatment created_by: cooperl creation_date: 2013-04-10T13:58:52Z [Term] id: EO:0001004 name: inorganic chemical treatment def: "A chemical treatment (EO:0007189) involving the application of inorganic chemical(s)." [PO:cooperl] xref: OBO_SF2_EO:51 is_a: EO:0007189 ! chemical treatment created_by: cooperl creation_date: 2013-04-10T14:03:18Z [Term] id: EO:0001005 name: nickel treatment def: "A mineral treatment (EO:0007044) involving exposure of plant to nickel (ChEBI:28112)." [ChEBI:28112, PO:cooperl] xref: OBO_SF2_EO:6 is_a: EO:0007044 ! mineral treatment created_by: cooperl creation_date: 2013-04-10T14:35:26Z [Term] id: EO:0001006 name: phosphate treatment def: "An inorganic anion treatment (EO:0001009) involving the application of phosphate (CHEBI:18367)." [CHEBI:18367, PO:cooperl] xref: OBO_SF2_EO:7 is_a: EO:0001009 ! inorganic anion treatment created_by: cooperl creation_date: 2013-04-10T14:54:09Z [Term] id: EO:0001007 name: mineral salt treatment def: "A mineral treatment (EO:0007044) involving exposure of the plant(s) to mineral salts (CHEBI:24866)." [PO:cooperl] comment: A salt (CHEBI:24866) is defined as an assembly of cations and anions. This is a genral term to include the salts of various minerals. xref: OBO_SF2_EO:53 is_a: EO:0007044 ! mineral treatment created_by: cooperl creation_date: 2013-04-10T15:26:58Z [Term] id: EO:0001008 name: sulfate treatment def: "An inorganic anion treatment (EO:0001009) involving the application of sulfate (CHEBI:35175)." [CHEBI:35175, PO:cooperl] xref: OBO_SF2_EO:8 is_a: EO:0001009 ! inorganic anion treatment created_by: cooperl creation_date: 2013-04-10T15:29:20Z [Term] id: EO:0001009 name: inorganic anion treatment def: "An inorganic chemical treatment (EO:0001004) involving the application of an anion or a mixture of anions (CHEBI:22563)." [CHEBI:22563, PO:cooperl] comment: An anion (ChEBI:22653) is defined as a monoatomic or polyatomic species having one or more elementary charges of the electron. xref: OBO_SF2_EO:54 is_a: EO:0001004 ! inorganic chemical treatment created_by: cooperl creation_date: 2013-04-11T12:29:25Z [Term] id: EO:0001010 name: carbohydrate treatment def: "An organic chemical treatment (EO:0001003) involving the application of a carbohydrate (CHEBI:16646) or mixture of carbohydrates." [CHEBI:16646, PO:cooperl] comment: Carbohydrate (CHEBI:16646) is defined as the generic term 'carbohydrate' includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. xref: OBO_SF2_EO:9 is_a: EO:0001003 ! organic chemical treatment created_by: moorel creation_date: 2013-04-11T13:43:22Z [Term] id: EO:0001011 name: monosaccharide treatment def: "A carbohydrate treatment (EO:0001010) involving the application of monosaccharide(s)(CHEBI:35381)." [CHEBI:35381, PO:cooperl] comment: Monosaccharides (CHEBI:35381) are defined as polyhydroxy aldehydes H[CH(OH)]nC(=O)H or polyhydroxy ketones H-[CHOH]n-C(=O)[CHOH]m-H with three or more carbon atoms. The generic term 'monosaccharide' (as opposed to oligosaccharide or polysaccharide) denotes a single unit, without glycosidic connection to other such units. It includes aldoses, dialdoses, aldoketoses, ketoses and diketoses, as well as deoxy sugars, provided that the parent compound has a (potential) carbonyl group. xref: OBO_SF2_EO:56 is_a: EO:0001010 ! carbohydrate treatment created_by: moorel creation_date: 2013-04-11T13:49:05Z [Term] id: EO:0001012 name: hexose treatment def: "A monosaccharide treatment (EO:0001011) involving the application of hexose (CHEBI:18133) sugar(s)." [CHEBI:18133, PO:cooperl] comment: Hexose (CHEBI:18133) is defined as any six-carbon monosaccharide which in its linear form contains either an aldehyde group at position 1 (aldohexose) or a ketone group at position 2 (ketohexose). xref: OBO_SF2_EO:57 is_a: EO:0001011 ! monosaccharide treatment created_by: moorel creation_date: 2013-04-11T13:55:09Z [Term] id: EO:0001013 name: glucose treatment def: "A hexose treatment (EO:0001012) involving the application of glucose (CHEBI:17234)." [CHEBI:17234, PO:cooperl] xref: OBO_SF2_EO:10 is_a: EO:0001012 ! hexose treatment created_by: moorel creation_date: 2013-04-11T13:59:21Z [Term] id: EO:0001014 name: disaccharide treatment def: "A carbohydrate treatment (EO:0001010) involving the application of disaccharide(s)(CHEBI:36233)." [CHEBI:36233, PO:cooperl] comment: Disaccharide (CHEBI:36233) is defined as a compound in which two monosaccharides are joined by a glycosidic bond. xref: OBO_SF2_EO:58 is_a: EO:0001010 ! carbohydrate treatment created_by: moorel creation_date: 2013-04-11T14:02:57Z [Term] id: EO:0001015 name: sucrose treatment def: "A disaccharide treatment (EO:0001014) involving the application of sucrose (CHEBI:17992)." [CHEBI:17992, PO:cooperl] comment: Sucrose (CHEBI:17992) is defined as a disaccharide formed by glucose and fructose units joined by an acetal oxygen bridge from hemiacetal of glucose to the hemiketal of the fructose. xref: OBO_SF2_EO:11 is_a: EO:0001014 ! disaccharide treatment created_by: moorel creation_date: 2013-04-11T14:07:07Z [Term] id: EO:0001016 name: inorganic cation treatment def: "An inorganic chemical treatment (EO:0001004) involving the application of a cation (CHEBI:36916) or mixture of cations ." [CHEBI:36916, PO:cooperl] is_a: EO:0001004 ! inorganic chemical treatment created_by: cooperl creation_date: 2013-04-12T11:42:16Z [Term] id: EO:0001017 name: ammonium treatment def: "An inorganic cation treatment (EO:0001016) involving the application of ammonium (NH4+) (CHEBI:28938)." [CHEBI:28938, PO:cooperl] xref: OBO_SF2_EO:5 is_a: EO:0001016 ! inorganic cation treatment created_by: cooperl creation_date: 2013-04-12T11:48:32Z [Term] id: EO:0001018 name: cadmium treatment def: "A mineral treatment (EO:0007044) involving exposure of plant to cadmium (CHEBI:22977)." [CHEBI:22977, PO:cooperl] xref: OBO_SF2_EO:30 is_a: EO:0007044 ! mineral treatment created_by: cooperl creation_date: 2013-04-12T12:14:55Z [Term] id: EO:0001019 name: organic gas treatment def: "An organic chemical treatment (EO:0001003) involving the application of a gas or mixture of gases." [PO:cooperl] is_a: EO:0001003 ! organic chemical treatment created_by: cooperl creation_date: 2013-04-12T12:38:49Z [Term] id: EO:0001020 name: carbon dioxide treatment def: "An inorganic gas treatment (EO:0001055) that involves the application of carbon dioxide (CHEBI:16526)." [CHEBI:16526, PO:cooperl] xref: OBO_SF2_EO:28 is_a: EO:0001055 ! inorganic gas treatment created_by: cooperl creation_date: 2013-04-12T12:41:25Z [Term] id: EO:0001021 name: ozone treatment def: "An inorganic anion treatment (EO:0001009) involving the application of ozone (CHEBI:29382)." [CHEBI:29382, PO:cooperl] xref: OBO_SF2_EO:29 is_a: EO:0001009 ! inorganic anion treatment created_by: cooperl creation_date: 2013-04-12T13:04:10Z [Term] id: EO:0001022 name: gamma radiation treatment def: "A radiation quality treatment (EO:0007154) involving the exposure to gamma radiation." [PO:cooperl] synonym: "gamma rays" EXACT [] xref: OBO_SF_EO:3609225 is_a: EO:0007154 ! radiation quality treatment created_by: cooperl creation_date: 2013-04-12T13:05:50Z [Term] id: EO:0001023 name: agar growth medium def: "An in vitro solid growth medium (EO:0007262) composed of agar." [PO:cooperl] xref: OBO_SF2_EO:45 is_a: EO:0007262 ! in vitro solid growth medium created_by: cooperl creation_date: 2013-04-12T18:01:37Z [Term] id: EO:0001024 name: vertical agar growth medium def: "An agar growth medium (EO:0001023) involving use of solid growth media in a vertical orientation." [PO:cooperl] xref: OBO_SF_EO:3609230 is_a: EO:0001023 ! agar growth medium created_by: cooperl creation_date: 2013-04-12T18:30:23Z [Term] id: EO:0001025 name: urea nitrogen regimen def: "A nitrogen macronutrient regimen (EO:0007284) involving exposure of plant to urea (CHEBI:16199) as the primary or sole source of nitrogen." [POC:cooperl] xref: OBO_SF2_EO:3 is_a: EO:0007284 ! nitrogen macronutrient regimen created_by: cooperl creation_date: 2013-04-12T19:19:27Z [Term] id: EO:0001026 name: MTA nitrogen regimen def: "A nitrogen macronutrient regimen (EO:0007284) involving exposure of plant to 5'-S-methyl-5'-thioadenosine (MTA; CHEBI:17509) as the primary or sole source of nitrogen." [CHEBI:17509, PO:cooperl] xref: OBO_SF2_EO:3 is_a: EO:0007284 ! nitrogen macronutrient regimen created_by: cooperl creation_date: 2013-04-12T19:23:02Z [Term] id: EO:0001027 name: alanine nitrogen regimen def: "A nitrogen macronutrient regimen (EO:0007284) involving exposure of plant to alanine (CHEBI:16449) as the primary or sole source of nitrogen." [CHEBI:16449, PO:cooperl] xref: OBO_SF2_EO:3 is_a: EO:0007284 ! nitrogen macronutrient regimen created_by: cooperl creation_date: 2013-04-12T19:23:17Z [Term] id: EO:0001028 name: glutamate nitrogen regimen def: "A nitrogen macronutrient regimen (EO:0007284) involving exposure of plant to glutamate (CHEBI:29987) as the primary or sole source of nitrogen." [CHEBI:29987, PO:cooperl] xref: OBO_SF2_EO:3 is_a: EO:0007284 ! nitrogen macronutrient regimen created_by: cooperl creation_date: 2013-04-12T19:35:46Z [Term] id: EO:0001029 name: arginine nitrogen regimen def: "A nitrogen macronutrient regimen (EO:0007284) involving exposure of plant to arginine (CHEBI:29016) as the primary or sole source of nitrogen." [CHEBI:29016, PO:cooperl] xref: OBO_SF2_EO:3 is_a: EO:0007284 ! nitrogen macronutrient regimen created_by: cooperl creation_date: 2013-04-12T19:36:14Z [Term] id: EO:0001030 name: ornithine nitrogen regimen def: "A nitrogen macronutrient regimen (EO:0007284) involving exposure of plant to ornithine (CHEBI:18257) as the primary or sole source of nitrogen." [CHEBI:18257, PO:cooperl] xref: OBO_SF2_EO:3 is_a: EO:0007284 ! nitrogen macronutrient regimen created_by: cooperl creation_date: 2013-04-12T19:40:51Z [Term] id: EO:0001031 name: glutamine nitrogen regimen def: "A nitrogen macronutrient regimen (EO:0007284) involving exposure of plant to glutamine (CHEBI:28300) as the primary or sole source of nitrogen." [CHEBI:28300, PO:cooperl] xref: OBO_SF2_EO:3 is_a: EO:0007284 ! nitrogen macronutrient regimen created_by: cooperl creation_date: 2013-04-12T19:41:18Z [Term] id: EO:0001032 name: Hymenoptera insect plant treatment def: "An insect plant treatment (EO:0007333) involving the exposure of a plant to an insect(s) of the Hymenoptera order." [PO:cooperl] is_a: EO:0007333 ! insect plant treatment created_by: cooperl creation_date: 2013-04-13T08:01:41Z [Term] id: EO:0001033 name: parasitic wasp insect plant treatment def: "A Hymenoptera insect plant treatment (EO:0001032) that involves exposure to parasitic wasps." [PO:cooperl] comment: Parasitic wasp (or parasitoid wasp) refers to a large evolutionary grade of hymenopteran superfamilies, mainly in the Apocrita (from wikipedia). xref: OBO_SF2_EO:38 is_a: EO:0001032 ! Hymenoptera insect plant treatment created_by: cooperl creation_date: 2013-04-13T13:38:41Z [Term] id: EO:0001034 name: Pseudomonas syringae plant treatment def: "A Pseudomonas plant treatment (EO:0007144) involving the exposure to bacteria of the Pseudomonas syringae group." [NCBI:136849, PO:cooperl] xref: OBO_SF2_EO:40 is_a: EO:0007144 ! Pseudomonas plant treatment created_by: cooperl creation_date: 2013-04-13T14:56:13Z [Term] id: EO:0001035 name: stratification treatment def: "A physical treatment (EO:0007316) involving both low temperature and moist conditions to overcome seed dormancy." [PO:cooperl] comment: A stratification process is used to pretreat seeds to simulate natural winter conditions in order to overcome dormancy and allow germination. xref: OBO_SF_EO:3609231 is_a: EO:0007316 ! physical plant treatment created_by: cooperl creation_date: 2013-04-25T14:11:44Z [Term] id: EO:0001036 name: chemical stress treatment def: "A chemical treatment (EO:0007189) that induces stress." [PO:cooperl] xref: OBO_SF2_EO:64 is_a: EO:0007189 ! chemical treatment created_by: moorel creation_date: 2013-04-16T13:48:41Z [Term] id: EO:0001037 name: oxidative stress treatment def: "A chemical stress treatment (EO:0001036) involving use of oxidative stress-inducing chemicals." [PO:cooperl] xref: OBO_SF2_EO:32 is_a: EO:0001036 ! chemical stress treatment created_by: moorel creation_date: 2013-04-16T13:54:16Z [Term] id: EO:0001038 name: osmotic stress treatment def: "A chemical stress treatment (EO:0001036) involving use of osmotic stress-inducing chemicals." [PO:cooperl] xref: OBO_SF2_EO:31 is_a: EO:0001036 ! chemical stress treatment created_by: moorel creation_date: 2013-04-16T14:11:36Z [Term] id: EO:0001039 name: radiation mutagen treatment def: "A radiation treatment (EO:0007151) involving exposure of plant to chemicals or radiation resulting in perturbations to the genome." [PO:cooperl] xref: OBO_SF_EO:3609226 is_a: EO:0007151 ! radiation treatment created_by: moorel creation_date: 2013-04-16T14:19:13Z [Term] id: EO:0001040 name: light-induced photooxidative stress treatment def: "A light intensity regimen (EO:0007224) involving use of light-dependent generations of reactive oxygen species." [PO:cooperl] xref: OBO_SF2_EO:44 is_a: EO:0007224 ! light intensity regimen created_by: moorel creation_date: 2013-04-16T14:22:02Z [Term] id: EO:0001041 name: limited zinc treatment def: "A zinc nutrient treatment (EO:0007309) involving exposure to limiting amounts or absence of zinc (CHEBI:27363)." [CHEBI:27363, PO:cooperl] xref: OBO_SF2_EO:23 is_a: EO:0007309 ! zinc nutrient regimen created_by: moorel creation_date: 2013-04-18T15:08:50Z [Term] id: EO:0001042 name: limited boron treatment def: "A boron nutrient regimen (EO:0007273) involving exposure to limiting amounts or absence of boron (CHEBI:27560)." [CHEBI:27560, PO:cooperl] xref: OBO_SF2_EO:15 is_a: EO:0007273 ! boron nutrient regimen created_by: moorel creation_date: 2013-04-18T15:16:27Z [Term] id: EO:0001043 name: limited glucose treatment def: "A glucose treatment (EO:0001013) involving exposure to limiting amounts or the absence of glucose (CHEBI:17234)." [CHEBI:17234, PO:cooperl] xref: OBO_SF2_EO:16 is_a: EO:0001013 ! glucose treatment created_by: moorel creation_date: 2013-04-18T15:21:57Z [Term] id: EO:0001044 name: limited carbon regimen def: "A carbon nutrient regimen (EO:0007303) involving exposure to limiting amounts or the absence of carbon (CHEBI:27594)." [CHEBI:27594, PO:cooperl] xref: OBO_SF2_EO:13 is_a: EO:0007303 ! carbon nutrient regimen created_by: moorel creation_date: 2013-04-24T12:22:51Z [Term] id: EO:0001045 name: limited sulfate treatment def: "A sulfate treatment (EO:0001008) involving exposure to limiting amounts or the absence of sulfate (CHEBI:35175)." [CHEBI:35175, PO:cooperl] xref: OBO_SF2_EO:27 is_a: EO:0001008 ! sulfate treatment created_by: moorel creation_date: 2013-04-24T12:37:29Z [Term] id: EO:0001046 name: limited phosphate treatment def: "A phosphate treatment (EO:0001006) involving exposure to limiting amounts or absence of phosphate (CHEBI:18367)." [CHEBI:18367, PO:cooperl] xref: OBO_SF2_EO:20 xref: OBO_SF2_EO:26 is_a: EO:0001006 ! phosphate treatment created_by: moorel creation_date: 2013-04-24T12:43:48Z [Term] id: EO:0001047 name: limited iron regimen def: "An iron nutrient regimen (EO:0007242) involving exposure to limiting amounts or the absence of iron (CHEBI:18248)." [CHEBI:18248, PO:cooperl] xref: OBO_SF2_EO:14 is_a: EO:0007242 ! iron nutrient regimen created_by: moorel creation_date: 2013-04-24T13:10:33Z [Term] id: EO:0001048 name: limited molybdenum regimen def: "A molybdenum nutrient regimen (EO:0007253) involving exposure to limiting amounts or the absence of molybdenum (CHEBI:28685)." [CHEBI:28685, PO:cooperl] xref: OBO_SF2_EO:18 is_a: EO:0007253 ! molybdenum nutrient regimen created_by: moorel creation_date: 2013-04-24T13:21:03Z [Term] id: EO:0001049 name: limited magnesium regimen def: "A magnesium nutrient regimen (EO:0007288) involving exposure to limiting amounts or the absence of magnesium (CHEBI:25107)." [CHEBI:25107, PO:cooperl] xref: OBO_SF2_EO:17 is_a: EO:0007288 ! magnesium nutrient regimen created_by: moorel creation_date: 2013-04-24T13:31:00Z [Term] id: EO:0001050 name: limited nitrogen regimen def: "A nitrogen macronutrient regimen (EO:0007284) involving exposure to limiting amounts or the absence of nitrogen (CHEBI:25555)." [CHEBI:25555, PO:cooperl] xref: OBO_SF2_EO:19 xref: OBO_SF2_EO:2 xref: OBO_SF2_EO:25 is_a: EO:0007284 ! nitrogen macronutrient regimen created_by: moorel creation_date: 2013-04-24T13:45:43Z [Term] id: EO:0001051 name: limited potassium regimen def: "A potassium nutrient regimen (EO:0007293) involving exposure to limiting amounts or the absence of potassium (CHEBI:26216)." [CHEBI:26216, PO:cooperl] xref: OBO_SF2_EO:21 is_a: EO:0007293 ! potassium nutrient regimen created_by: moorel creation_date: 2013-04-24T13:54:39Z [Term] id: EO:0001052 name: limited sulfur regimen def: "A sulfur nutrient regimen (EO:0007295) involving exposure to limiting amounts or the absence of sulfur (CHEBI:26833)." [CHEBI:26833, PO:cooperl] xref: OBO_SF2_EO:22 is_a: EO:0007295 ! sulfur nutrient regimen created_by: moorel creation_date: 2013-04-24T14:06:32Z [Term] id: EO:0001053 name: limited manganese regimen def: "A manganese nutrient regimen (EO:0007387) involving exposure to limiting amounts or the absence of manganese (CHEBI:18291)." [CHEBI:18291, PO:cooperl] xref: OBO_SF2_EO:24 is_a: EO:0007387 ! manganese nutrient regimen created_by: moorel creation_date: 2013-04-24T14:16:15Z [Term] id: EO:0001054 name: limited nitrate regimen def: "A nitrate regimen (EO:0007406) involving exposure to limiting amounts or the absence of nitrate (CHEBI:17632)." [CHEBI:17632, PO:cooperl] is_a: EO:0007406 ! nitrate regimen created_by: moorel creation_date: 2013-04-24T14:28:43Z [Term] id: EO:0001055 name: inorganic gas treatment def: "An inorganic chemical treatment (EO:0001004) involving the application of a gas or mixture of gases." [PO:cooperl] xref: OBO_SF2_EO:66 is_a: EO:0001004 ! inorganic chemical treatment created_by: moorel creation_date: 2013-04-25T13:16:47Z [Term] id: EO:0001056 name: elevated carbon dioxide treatment def: "A carbon dioxide treatment (EO:0001020) involving an increased concentration of carbon dioxide (CHEBI:16526)." [CHEBI:16526, POC:cooperl] xref: OBO_SF2_EO:1 is_a: EO:0001020 ! carbon dioxide treatment created_by: moorel creation_date: 2013-04-25T13:18:08Z [Term] id: EO:0001057 name: abnormal stratification treatment def: "A stratification treatment (EO:0001035) involving the absence of, or non-standard exposure to temperature or moisture conditions utilized in the breaking of seed dormancy." [POC:cooperl] xref: OBO_SF2_EO:47 is_a: EO:0001035 ! stratification treatment created_by: cooperl creation_date: 2013-04-25T14:21:09Z [Term] id: EO:0001058 name: Glomeromycota treatment def: "A fungal plant treatment (EO:0007233) involving the exposure of plant to the pathogen belonging to Glomeromyetes class." [POC:laura_moore] xref: NCBI_Taxon_ID:214504 xref: OBO_SF2_EO:68 is_a: EO:0007233 ! fungal plant treatment created_by: moorel creation_date: 2013-06-20T14:02:46Z [Term] id: EO:0001059 name: arbuscular mycorrhizal fungal treatment def: "A Glomeromycota treatment (EO:0001058) involving the exposure of compatible plants to mutualistic arbuscular mycorrhizal fungi." [POC:laura_moore] xref: OBO_SF2_EO:68 is_a: EO:0001058 ! Glomeromycota treatment created_by: moorel creation_date: 2013-06-20T14:08:36Z [Term] id: EO:0001060 name: sodium hydroxide treatment def: "An inorganic anion treatment (EO:0001009) involving the application of sodium hydroxide (CHEBI:32145)." [PO:cooperl] synonym: "NaOH treatment" EXACT [] xref: OBO_SF2_EO:88 is_a: EO:0001009 ! inorganic anion treatment created_by: cooperl creation_date: 2014-06-04T10:01:38Z [Term] id: EO:0001061 name: polyethylene glycol treatment def: "An organic chemical treatment (EO:0001003) involving the application of polyethylene glycol (CHEBI:46793)." [PO:cooperl] synonym: "PEG treatment" EXACT [] synonym: "poly(ethylene glycol) treatment" EXACT [] is_a: EO:0001003 ! organic chemical treatment created_by: cooperl creation_date: 2014-06-04T10:14:09Z [Term] id: EO:0007001 name: UV-B light regimen def: "The treatment using UV-B light either exclusively or as part of a supplemental electromagnetic radiation in the wavelength range of 315-280nm." [GR:pj] is_a: EO:0007222 ! UV light regimen [Term] id: EO:0007002 name: UV-A light regimen def: "The treatment using UV-A light either exclusively or as part of a supplemental electromagnetic radiation in the wavelength range of 380-315nm." [GR:pj] is_a: EO:0007222 ! UV light regimen [Term] id: EO:0007003 name: temperate region def: "Exposure to the regions with a temperate climate, which are usually characterized by having roughly equally long winters and summers." [GR:pj] is_a: EO:0007064 ! ecological environment [Term] id: EO:0007004 name: loam content is_a: EO:0007050 ! soil texture [Term] id: EO:0007005 name: Viridiplantae plant treatment def: "A biotic plant treatment (EO:0007357) involving exposure of a plant to another plant." [GR:pj, NCBI_taxid:33090] comment: Suggests the exposure of plant to other plants found in its growth environment. These plants may be growing as a weed or as part of normal farming practices. This treatmnet is part of an assay of any direct or indirect, harmful or beneficial effect of one plant on another through the production of chemical compounds (allelochemicals) that escape in the environment. Viridiplantae include all plants from algae through angiosperms. synonym: "green plant" RELATED [] is_a: EO:0007357 ! biotic plant treatment [Term] id: EO:0007006 name: monocot mixed crop neighbor def: "OBSOLETE. " [GR:pj] is_obsolete: true [Term] id: EO:0007007 name: monocot weed plant neighbor def: "OBSOLETE. " [GR:pj] is_obsolete: true [Term] id: EO:0007008 name: Monochoria vaginalis def: "The exposure of reference/experimental plant to monocot plant Monochoria vaginalis, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj, NCBI_taxid:44972] synonym: "Asian pickerel weed" RELATED [] synonym: "heartshape false pickerelweed" RELATED [] is_a: EO:0007022 ! Liliopsida [Term] id: EO:0007009 name: Eudicotyledon def: "The exposure of reference/experimental plant to dicot plants found in its growth environment. These plants may be growing as a weed or as part of normal farming practices." [GR:pj, NCBI_taxid:71240] synonym: "dicot" RELATED [] synonym: "Eudicot" RELATED [] is_a: EO:0007005 ! Viridiplantae plant treatment [Term] id: EO:0007010 name: Sagittaria montevidensis def: "The exposure of reference/experimental plant to monocot plant Sagittaria montevidensis, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj, NCBI_taxid:118780] synonym: "giant arrowhead" RELATED [] is_a: EO:0007139 ! Sagittaria spp. [Term] id: EO:0007011 name: Sagittaria longiloba def: "The exposure of reference/experimental plant to monocot plant Sagittaria longiloba, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj] synonym: "Flecha de Agua" RELATED [] synonym: "longlobe arrowhead" RELATED [] synonym: "narrow-leaf arrowhead" RELATED [] is_a: EO:0007139 ! Sagittaria spp. [Term] id: EO:0007012 name: Heteranthera limosa def: "The exposure of reference/experimental plant to monocot plant Heteranthera limosa, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj, NCBI_taxid:44958] synonym: "blue mud-plantain" RELATED [] synonym: "ducksalad" RELATED [] is_a: EO:0007022 ! Liliopsida [Term] id: EO:0007013 name: Echinodorus berteroi def: "The exposure of reference/experimental plant to monocot plant Echinodorus berteroi, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj] synonym: "upright burhead" RELATED [] is_a: EO:0007138 ! Echinodorus spp. [Term] id: EO:0007014 name: Echinodorus cordifolius def: "The exposure of reference/experimental plant to monocot plant Echinodorus cordifolius, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj, NCBI_taxid:13048] synonym: "creeping burhead" RELATED [] synonym: "Texas mudbaby" RELATED [] is_a: EO:0007138 ! Echinodorus spp. [Term] id: EO:0007015 name: Ammannia spp. def: "The exposure of reference/experimental plant to dicot plant genus Ammannia found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj] is_a: EO:0007009 ! Eudicotyledon [Term] id: EO:0007016 name: Bacopa spp. def: "The exposure of reference/experimental plant to dicot plant genus Bacopa found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj] is_a: EO:0007009 ! Eudicotyledon [Term] id: EO:0007017 name: Cyperus difformis def: "The exposure of reference/experimental plant to monocot plant Cyperus difformis, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj] synonym: "flatsedge" RELATED [] synonym: "smallflower umbrellaplant" RELATED [] is_a: EO:0007141 ! Cyperus spp. [Term] id: EO:0007018 name: Scirpus fluviatilis def: "The exposure of reference/experimental plant to monocot plant Scirpus fluviatilis, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj] synonym: "river bulrush" RELATED [] is_a: EO:0007140 ! Scirpus spp. [Term] id: EO:0007019 name: Cyperus iria def: "The exposure of reference/experimental plant to monocot plant Cyperus difformis, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj] synonym: "rice field flatsedge" RELATED [] is_a: EO:0007141 ! Cyperus spp. [Term] id: EO:0007020 name: Scirpus mucronatus def: "The exposure of reference/experimental plant to monocot plant Scirpus mucronatus, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj] synonym: "ricefield bulrush" RELATED [] is_a: EO:0007140 ! Scirpus spp. [Term] id: EO:0007021 name: Alisma plantago-aquatica def: "The exposure of reference/experimental plant to monocot plant Alisma plantago-aquatica found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj, NCBI_taxid:15000] synonym: "water plantain" RELATED [] is_a: EO:0007022 ! Liliopsida [Term] id: EO:0007022 name: Liliopsida def: "The exposure of reference/experimental plant to monocot plants found in its growth environment. These plants may be growing as a weed or as part of normal farming practices." [GR:pj, NCBI_taxid:4447] synonym: "monocot" RELATED [] synonym: "monocotyledon" RELATED [] is_a: EO:0007005 ! Viridiplantae plant treatment [Term] id: EO:0007023 name: gaseous treatment def: "A physical plant treatment (EO:0007316) involving the application of a gas or a combination of gasses." [GR:pj, PO:cooperl] xref: OBO_SF2_EO:86 is_a: EO:0007316 ! physical plant treatment [Term] id: EO:0007024 name: aerobic environment def: "The use of conditions in which gaseous or dissolved oxygen is present to study various types of responses on their extrinsic and/or intrinsic stimulus." [GR:pj] is_a: EO:0007023 ! gaseous treatment [Term] id: EO:0007025 name: anaerobic environment def: "The use of conditions in which gaseous or dissolved oxygen is absent (devoid of dioxygen) to study various types of responses on their extrinsic and/or intrinsic stimulus." [GR:pj] is_a: EO:0007023 ! gaseous treatment [Term] id: EO:0007026 name: Echinochloa glabrescens def: "The exposure of reference/experimental plant to monocot plant Echinochloa glabrescens found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj] synonym: "barnyardgrass" RELATED [] is_a: EO:0007137 ! Echinochloa spp. [Term] id: EO:0007027 name: seasonal environment def: "A plant treatment (EO:0001001) involving an exposure to a given conditions of regional seasons." [GR:pj, PO:cooperl] xref: OBO_SF2_EO:84 is_a: EO:0001001 ! plant treatment [Term] id: EO:0007028 name: Echinochloa crus-galli def: "The exposure of reference/experimental plant to monocot plant Echinochloa crus-galli, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj, NCBI_taxid:90397] synonym: "barnyardgrass" RELATED [] synonym: "cockspur grass" RELATED [] is_a: EO:0007137 ! Echinochloa spp. [Term] id: EO:0007029 name: Typha spp. def: "The exposure of reference/experimental plant to monocot plant of genus Typha spp found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj, NCBI_taxid:4732] synonym: "cattail" RELATED [] is_a: EO:0007022 ! Liliopsida [Term] id: EO:0007030 name: Leptochloa fascicularis def: "The exposure of reference/experimental plant to monocot plant Leptochloa fascicularis found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj] synonym: "bearded sprangeltop" RELATED [] is_a: EO:0007022 ! Liliopsida [Term] id: EO:0007031 name: Mammalia def: "The exposure of plant to the anilmals of higher order that may be resopnsible for damaging the plant due to grazing or feeding practices." [GR:pj, NCBI_taxid:40674] synonym: "mammal" RELATED [] is_a: EO:0007349 ! metazoan plant treatment [Term] id: EO:0007033 name: rabi season def: "The treatment involving an exposure to the crop season (October-March) as practiced in South Asia." [GR:pj] is_a: EO:0007027 ! seasonal environment [Term] id: EO:0007034 name: kharif season def: "The treatment involving an exposure to the crop season (May-October) as practised in South Asia." [GR:pj] is_a: EO:0007027 ! seasonal environment [Term] id: EO:0007035 name: winter season def: "The treatment involving an exposure to the winter season." [GR:pj] is_a: EO:0007027 ! seasonal environment [Term] id: EO:0007036 name: summer season def: "The treatment involving an exposure to the summer season." [GR:pj] is_a: EO:0007027 ! seasonal environment [Term] id: EO:0007037 name: spring season def: "The treatment involving an exposure to the spring season." [GR:pj] is_a: EO:0007027 ! seasonal environment [Term] id: EO:0007038 name: autumn season def: "The treatment involving an exposure to the autumn season." [GR:pj] is_a: EO:0007027 ! seasonal environment [Term] id: EO:0007039 name: dicot weed plant neighbor def: "OBSOLETE. " [GR:pj] is_obsolete: true [Term] id: EO:0007040 name: dicot mixed crop neighbor def: "OBSOLETE. " [GR:pj] is_obsolete: true [Term] id: EO:0007041 name: antibiotic treatment def: "A chemical treatment (EO:0007189) involving the use of antibiotic for selection purposes." [GR:pj, TO:moorel] xref: OBO_SF2_EO:70 is_a: EO:0007189 ! chemical treatment [Term] id: EO:0007043 name: non-mineral nutrient regimen def: "Treatment involving the exposure of plant to molecular forms of nutrient as supplement to study various types of responses." [GR:pj] is_a: EO:0007241 ! plant nutrient treatment [Term] id: EO:0007044 name: mineral treatment def: "An inorganic chemical treatment (EO:0001004) involving the application of a mineral or a combination of minerals." [GR:pj, PO:cooperl] xref: OBO_SF2_EO:52 is_a: EO:0001004 ! inorganic chemical treatment [Term] id: EO:0007045 name: primary plant macronutrient regimen def: "A plant macronutrient regimen (EO:0007240) involving the use of the primary plant macronutrients nitrogen (N), phosphorus (P), and potassium (K)." [GR:pj, PO:cooperl] comment: These plant macronutrients are required by the plant in greatest quantities for normal growth. is_a: EO:0007240 ! plant macronutrient regimen [Term] id: EO:0007046 name: secondary macronutrient def: "Treatment involving the use of macronutrients (Ca, Mg, S) as supplement to study various types of responses. These macronutrients are used less often as fertilizers than the primary elements." [GR:pj] is_a: EO:0007240 ! plant macronutrient regimen [Term] id: EO:0007047 name: other nutrient regimen def: "Treatment involving the exposure of plant to elemental forms of nutrient as supplement to study various types of responses. These are not considered essential elements." [GR:pj] is_a: EO:0007241 ! plant nutrient treatment [Term] id: EO:0007048 name: sodium chloride regimen def: "A salt treatment (EO:0007185) involving the use of sodium chloride salt as supplement to liquid and soil growth media to study various types of responses on its application." [GR:pj] synonym: "NaCl treatment" RELATED [] xref: CHEBI:26710 xref: OBO_SF2_EO:77 is_a: EO:0007185 ! salt treatment [Term] id: EO:0007049 name: soil environment def: "The treatment involving growing plants and exposing them to soil growth media with varying contents." [GR:pj] is_a: EO:0007147 ! plant growth medium [Term] id: EO:0007050 name: soil texture def: "The treatment involving growing plants in varying textures of soil growth media." [GR:pj] is_a: EO:0007049 ! soil environment [Term] id: EO:0007051 name: sand content is_a: EO:0007050 ! soil texture [Term] id: EO:0007052 name: organic matter content is_a: EO:0007050 ! soil texture [Term] id: EO:0007053 name: silt content is_a: EO:0007050 ! soil texture [Term] id: EO:0007054 name: clay content is_a: EO:0007050 ! soil texture [Term] id: EO:0007055 name: Cochliobolus spp. def: "Treatment involving the exposure of plant to the pathogen Cochliobolus spp." [GR:ivy, NCBI_taxid:5015] is_a: EO:0007107 ! Ascomycota treatment [Term] id: EO:0007056 name: soil flora def: "OBSOLETE. A treatment involving growing plants and exposing them to varying types of flora in soil growth media." [GR:pj] is_obsolete: true [Term] id: EO:0007057 name: soil fauna def: "OBSOLETE. A treatment involving growing plants and exposing them to varying types of fauna in soil growth media." [GR:pj] is_obsolete: true [Term] id: EO:0007058 name: soil pH environment def: "The treatment involving growing plants in varying pH levels of soil growth media." [GR:pj] is_a: EO:0007049 ! soil environment [Term] id: EO:0007059 name: acidic pH soil environment def: "The treatment involving an exposure to acidic pH levels of soil growth media." [GR:pj] is_a: EO:0007058 ! soil pH environment is_a: EO:0007134 ! acidic pH growth media environment [Term] id: EO:0007060 name: Sphaerulina oryzina treatment def: "A plant fungal treatment (EO:0007233) involving the exposure of plant to the pathogen Sphaerulina oryzina." [GR:ivy, NCBI_taxid:237189] comment: Sphaerulina oryzina is a causal agent for rice Narrow Brown Leaf Spot disease. synonym: "Cercospora janseana" RELATED [] synonym: "Cercospora oryzae" RELATED [] xref: NCBI_Taxon_ID:706553 is_a: EO:0007233 ! fungal plant treatment [Term] id: EO:0007061 name: tropical region def: "Exposure to the geographical region of the Earth limited in latitude by the two tropics namely, the Tropic of Cancer and the Tropic of Capricorn, and thus centered on the equator." [GR:pj] comment: This area lies approximately between 23.5 N latitude and 23.5 S latitude, and includes all the parts of the Earth where the sun reaches a point directly overhead at least once during the solar year (north of the Tropic of Cancer and south of the Tropic of Capricorn the sun never reaches an azimuth of 90 or directly overhead). is_a: EO:0007064 ! ecological environment [Term] id: EO:0007062 name: basic pH soil environment def: "The treatment involving an exposure to basic pH levels of soil growth media." [GR:pj] is_a: EO:0007058 ! soil pH environment is_a: EO:0007133 ! basic pH growth media environment [Term] id: EO:0007063 name: diuron treatment def: "An herbicide treatment (EO:0007183) involving the use of diuron (DCMU)." [GR:pj, TO:moorel] comment: Diuron blocks the reduction of plastoquinone in the photosynthetic light reaction and keeps the plastoquinone pool oxidized. synonym: "3-(3,4-dichloro-phenyl)-1,1-dimethylurea" RELATED [] synonym: "dichlorophenyldimethyl urea" RELATED [] synonym: "diuron" RELATED [] xref: CHEBI:116509 xref: OBO_SF2_EO:75 is_a: EO:0007183 ! herbicide treatment [Term] id: EO:0007064 name: ecological environment def: "A plant treatment (EO:0001001) involving exposure to the various factors that comprise a geographical/regional location." [GR:pj, PO:cooperl] xref: OBO_SF2_EO:80 is_a: EO:0001001 ! plant treatment [Term] id: EO:0007065 name: Entyloma oryzae def: "Treatment involving the exposure of plant to the pathogen Entyloma oryzae. It is a causal agent for rice Leaf Smut disease." [GR:ivy] synonym: "Entyloma dactylidis" RELATED [] synonym: "Entyloma lineatum" RELATED [] is_a: EO:0007073 ! Basidiomycota treatment [Term] id: EO:0007066 name: cytokinin treatment def: "A growth hormone treatment (EO:0007165) involving the use of cytokinin (or its homolog) growth hormone to study various types of responses on its extrinsic and/or intrinsic application." [GR:pj] synonym: "6-benzylaminopurine" RELATED [] synonym: "N-benzyl-adenine" RELATED [] synonym: "verdan senescence" RELATED [] xref: OBO_SF2_EO:72 is_a: EO:0007165 ! growth hormone treatment [Term] id: EO:0007067 name: hydroponic plant culture media def: "The treatment suggesting the use of liquid growth media for growing the plants." [GR:pj] synonym: "soilless pant culture media" RELATED [] is_a: EO:0007147 ! plant growth medium [Term] id: EO:0007068 name: ethylene treatment def: "A growth hormone treatment (EO:0007165) involving the use of ethylene (or its homolog) growth hormone to study various types of responses on its extrinsic and/or intrinsic application." [GR:pj] xref: OBO_SF2_EO:72 is_a: EO:0001019 ! organic gas treatment is_a: EO:0007165 ! growth hormone treatment [Term] id: EO:0007069 name: gibberellic acid treatment def: "A growth hormone treatment (EO:0007165) involving the use of GA (or its homolog) growth hormone to study various types of responses on its extrinsic and/or intrinsic application." [GR:pj] synonym: "GA regimen" RELATED [] xref: OBO_SF2_EO:72 is_a: EO:0007165 ! growth hormone treatment [Term] id: EO:0007070 name: indole acetic acid treatment def: "An auxin treatment (EO:0007074) involving the use of IAA (or its homolog) growth hormone to study various types of responses on its extrinsic and/or intrinsic application." [GR:pj] synonym: "IAA regimen" RELATED [] xref: OBO_SF2_EO:72 is_a: EO:0007074 ! auxin treatment [Term] id: EO:0007071 name: suspension cell culture medium def: "The treatment suggesting the use of liquid growth medium for cell cultured samples." [GR:pj] is_a: EO:0007265 ! in vitro liquid growth medium [Term] id: EO:0007072 name: Microdochium oryzae def: "Treatment involving the exposure of plant to the pathogen Microdochium oryzae. It is a causal agent for rice various forms of Leaf scald disease such as Brown Leaf Blight Disease , Leaf Sheath Browning Disease, Leaf Tip Blight Disease and Leaf Tip Dying Disease." [GR:ivy] synonym: "Rhynchosporium oryzae" RELATED [] is_a: EO:0007107 ! Ascomycota treatment [Term] id: EO:0007073 name: Basidiomycota treatment def: "A fungal plant treatment (EO:0007233) involving the exposure of plant to the pathogen belonging to Basidiomycetes class." [GR:ivy, NCBI_taxid:5204] synonym: "basidiomycetes" RELATED [] xref: NCBI_Taxon_ID:5204 is_a: EO:0007233 ! fungal plant treatment [Term] id: EO:0007074 name: auxin treatment def: "A growth hormone treatment (EO:0007165) involving the use of auxin (or its homolog) growth hormone to study various types of responses on its extrinsic and/or intrinsic application." [GR:pj] xref: OBO_SF2_EO:72 is_a: EO:0007165 ! growth hormone treatment [Term] id: EO:0007075 name: high light intensity regimen is_a: EO:0007224 ! light intensity regimen [Term] id: EO:0007076 name: moderate light intensity regimen is_a: EO:0007224 ! light intensity regimen [Term] id: EO:0007077 name: Tilletia barclayana def: "Treatment involving the exposure of plant to the pathogen Tilletia barclayana. It is a causal agent for rice Kernel Smut disease." [GR:ivy, NCBI_taxid:157178] synonym: "Neovossia horrida" RELATED [] is_a: EO:0007073 ! Basidiomycota treatment [Term] id: EO:0007078 name: light quantity regimen def: "In biological experiments often it refer to the length of the exposure time. The treatment also includes the quantity of light falling on a per unit area. This may be expressed either in terms of hours for which teh radiation was available or in the units of luminous flux or the lumens." [GR:pj] synonym: "photoperiod regimen" RELATED [] is_a: EO:0007153 ! radiation quantity regimen [Term] id: EO:0007079 name: sulfate fertilizer regimen def: "Treatment involving the use of sulfate fertilizer and its components as supplements to study various types of responses." [GR:pj] is_a: EO:0007086 ! chemical fertilizer regimen [Term] id: EO:0007080 name: jasmonic acid treatment def: "A growth hormone treatment (EO:0007165) involving the use of JA (or its homolog) growth hormone to study various types of responses on its extrinsic and/or intrinsic application." [GR:pj] synonym: "JA regimen" RELATED [] xref: OBO_SF2_EO:72 is_a: EO:0007165 ! growth hormone treatment [Term] id: EO:0007081 name: river bank region is_a: EO:0007396 ! flood prone region [Term] id: EO:0007082 name: sea coast region is_a: EO:0007396 ! flood prone region [Term] id: EO:0007083 name: Phoma sorghina def: "Treatment involving the exposure of plant to the pathogen Phoma sorghina." [GR:ivy, NCBI_taxid:73005] comment: It is a causal agent for rice Glume Blight Disease. xref: NCBI_taxid:73005 is_a: EO:0007107 ! Ascomycota treatment [Term] id: EO:0007084 name: other animals def: "Treatment involving the exposure of plant to the pests that do not falll under the well known classes of birds, mammals, insects, nematode and molluscs." [GR:pj] is_a: EO:0007349 ! metazoan plant treatment [Term] id: EO:0007085 name: fertilizer regimen def: "A plant nutrient treatment (EO:0007241) involving the use of a fertilizer, a combination of plant nutrients." [GR:pj] is_a: EO:0007241 ! plant nutrient treatment [Term] id: EO:0007086 name: chemical fertilizer regimen def: "Treatment involving the use of inorganic fertilizer and its components as supplements to study various types of responses." [GR:pj] is_a: EO:0007085 ! fertilizer regimen [Term] id: EO:0007087 name: natural fertilizer regimen def: "Treatment involving the use of organic fertilizer and its component as supplements to study various types of responses." [GR:pj] synonym: "organic fertilizer regimen" RELATED [] is_a: EO:0007085 ! fertilizer regimen [Term] id: EO:0007088 name: Ceratobasidium oryzae-sativae def: "Treatment involving the exposure of plant to the pathogen Ceratobasidium oryzae-sativae. It is a causal agent for rice Aggregate Sheath Spot disease, which is also known as Brown Sclerotial disease." [GR:ivy, NCBI_taxid:63189] synonym: "Ceratobasidium oryzae-sativae" RELATED [] synonym: "Ceratobasidium sativae" RELATED [] synonym: "Rhizoctonia oryzae-sativae" RELATED [] is_a: EO:0007073 ! Basidiomycota treatment [Term] id: EO:0007089 name: bone meal regimen is_a: EO:0007087 ! natural fertilizer regimen [Term] id: EO:0007090 name: ammonium nitrate regimen def: "Treatment involving the use of ammonium nitrate supplement to study various types of responses." [GR:pj] is_a: EO:0007406 ! nitrate regimen [Term] id: EO:0007091 name: seaweed extract regimen is_a: EO:0007087 ! natural fertilizer regimen [Term] id: EO:0007092 name: wood ash regimen is_a: EO:0007087 ! natural fertilizer regimen [Term] id: EO:0007093 name: fish meal regimen is_a: EO:0007087 ! natural fertilizer regimen [Term] id: EO:0007094 name: sodium nitrate regimen def: "Treatment involving the use of sodium nitrate supplement to study various types of responses." [GR:pj] is_a: EO:0007406 ! nitrate regimen [Term] id: EO:0007095 name: calcium nitrate regimen def: "Treatment involving the use of calcium nitrate supplement to study various types of responses." [GR:pj] is_a: EO:0007406 ! nitrate regimen [Term] id: EO:0007096 name: potassium nitrate regimen def: "Treatment involving the use of potassiumium nitrate supplement to study various types of responses." [GR:pj] is_a: EO:0007406 ! nitrate regimen [Term] id: EO:0007097 name: ammonium sulfate regimen def: "Treatment involving the use of ammonium sulfate supplement to study various types of responses." [GR:pj] is_a: EO:0007079 ! sulfate fertilizer regimen is_a: EO:0007102 ! nitrogen fertilizer regimen [Term] id: EO:0007098 name: ferrous sulfate regimen def: "Treatment involving the use of ferrous sulfate supplement to study various types of responses." [GR:pj] is_a: EO:0007079 ! sulfate fertilizer regimen [Term] id: EO:0007099 name: potassium sulfate regimen def: "Treatment involving the use of potassium sulfate supplement to study various types of responses." [GR:pj] is_a: EO:0007079 ! sulfate fertilizer regimen [Term] id: EO:0007100 name: superphosphate regimen def: "Treatment involving the use of super phosphate supplement to study various types of responses." [GR:pj] is_a: EO:0007103 ! phosphate fertilizer regimen [Term] id: EO:0007101 name: urea regimen def: "Treatment involving the use of urea as source of nitrogen supplement to study various types of responses." [GR:pj] is_a: EO:0007102 ! nitrogen fertilizer regimen [Term] id: EO:0007102 name: nitrogen fertilizer regimen def: "Treatment involving the use of nitrogen fertilizer and its components as supplements to study various types of responses." [GR:pj] is_a: EO:0007086 ! chemical fertilizer regimen [Term] id: EO:0007103 name: phosphate fertilizer regimen def: "Treatment involving the use of phosphate fertilizer and its components as supplements to study various types of responses." [GR:pj] is_a: EO:0007086 ! chemical fertilizer regimen [Term] id: EO:0007104 name: NPK fertilizer regimen def: "Treatment involving the use of nitrogen, phosphorus and potassium supplements to study various types of responses." [GR:pj] is_a: EO:0007102 ! nitrogen fertilizer regimen is_a: EO:0007103 ! phosphate fertilizer regimen [Term] id: EO:0007105 name: abscisic acid treatment def: "A growth hormone treatment (EO:0007165) involving the use of abscisic acid (or its homolog) growth hormone to study various types of responses on its extrinsic and/or intrinsic application." [GR:pj] synonym: "ABA regimen" RELATED [] xref: OBO_SF2_EO:72 is_a: EO:0007165 ! growth hormone treatment [Term] id: EO:0007106 name: Stramenopiles def: "Treatment involving the exposure of plant to the Stramenopiles (heterokonts) present in the growth environment." [GR:pj, NCBI_taxid:33634] synonym: "chromophyta" RELATED [] synonym: "heterokont" RELATED [] is_a: EO:0007357 ! biotic plant treatment [Term] id: EO:0007107 name: Ascomycota treatment def: "A fungal plant treatment (EO:0007233) involving the exposure of plant to the pathogen belonging to Ascomycetes class." [GR:ivy, NCBI_taxid:4890] synonym: "ascomycetes" RELATED [] xref: NCBI_Taxon_ID:4890 is_a: EO:0007233 ! fungal plant treatment [Term] id: EO:0007108 name: Proteobacterial plant treatment def: "A bacterial plant treatment (EO:0007246) involving the exposure of bacteria of the Proteobacteria." [GR:ivy, NCBI:1224] synonym: "purple bacteria" RELATED [] is_obsolete: true [Term] id: EO:0007109 name: ssRNA positive-strand virus with no DNA stage def: "Treatment involving the exposure of plant to the pathogenic single strand RNA positive stand virus." [GR:pj] is_a: EO:0007210 ! virus plant treatment [Term] id: EO:0007110 name: dsRNA virus def: "Treatment involving the exposure of plant to the pathogenic double stranded RNA virus." [GR:pj, NCBI_taxid:35325] synonym: "dsRNA nonenveloped viruses" RELATED [] is_a: EO:0007210 ! virus plant treatment [Term] id: EO:0007111 name: ssRNA negative-strand virus def: "Treatment involving the exposure of plant to the pathogenic single strand RNA negative stand virus." [GR:pj] is_a: EO:0007210 ! virus plant treatment [Term] id: EO:0007112 name: retroid virus def: "Treatment involving the exposure of plant to the pathogenic retroid virus." [GR:pj, NCBI_taxid:35268] is_a: EO:0007210 ! virus plant treatment [Term] id: EO:0007113 name: rice necrosis mosaic virus alt_id: EO:0007354 def: "Treatment involving the exposure of plant to the rice necrosis mosaic virus. It is a causal agent for rice necrosis mosaic disease." [GR:ivy, NCBI_taxid:59500] synonym: "rice necrosis mosaic virus" RELATED [] synonym: "RNMV" RELATED [] is_a: EO:0007109 ! ssRNA positive-strand virus with no DNA stage [Term] id: EO:0007114 name: Lepidoptera def: "Treatment involving the exposure of plant to the pest of lepidoptera class." [GR:pj, NCBI_taxid:7088] synonym: "butterfly" RELATED [] synonym: "moth" RELATED [] is_a: EO:0007333 ! insect plant treatment [Term] id: EO:0007115 name: Spodoptera spp. def: "Treatment involving the exposure of plant to the pest Spodoptera spp." [GR:pj, NCBI_taxid:7106] is_a: EO:0007114 ! Lepidoptera [Term] id: EO:0007116 name: Hemiptera insect plant treatment def: "An insect plant treatment (EO:0007333) involving the exposure of a plant to an insect(s) of the Hemiptera order." [GR:pj, NCBI_taxid:7524, PO:cooperl] comment: Insects of the Hemiptera order include aphids, planthoppers, bugs\nwhiteflies, scale insects, psyllids and jumping plant lice. synonym: "bug" RELATED [] is_a: EO:0007333 ! insect plant treatment [Term] id: EO:0007117 name: Pseudaletia spp. def: "Treatment involving the exposure of plant to the pest rice army worm." [GR:pj, NCBI_taxid:7104] synonym: "armyworm" RELATED [] is_a: EO:0007114 ! Lepidoptera [Term] id: EO:0007118 name: Gibberella spp. def: "Treatment involving the exposure of plant to the pathogen Gibberella spp." [GR:ivy, NCBI_taxid:5126] is_a: EO:0007107 ! Ascomycota treatment [Term] id: EO:0007119 name: Dipteran insect plant treatment def: "An insect plant treatment (EO:0007333) involving the exposure of a plant to an insect(s) of the Diptera order." [GR:pj, NCBI_taxid:7147] synonym: "fly" RELATED [] is_a: EO:0007333 ! insect plant treatment [Term] id: EO:0007120 name: Coleoptera def: "Treatment involving the exposure of plant to the pest commonly called as beetles or Coleoptera." [GR:pj, NCBI_taxid:7041] synonym: "beetle" RELATED [] is_a: EO:0007333 ! insect plant treatment [Term] id: EO:0007121 name: Thysanoptera def: "Treatment involving the exposure of plant to the pest of Thysanoptera class." [GR:pj, NCBI_taxid:30262] synonym: "thrips" RELATED [] is_a: EO:0007333 ! insect plant treatment [Term] id: EO:0007122 name: Chilo def: "Treatment involving the exposure of plant to the pest Chilo." [GR:pj, NCBI_taxid:168630] synonym: "stalk borer" RELATED [] synonym: "stemborer" RELATED [] is_a: EO:0007114 ! Lepidoptera [Term] id: EO:0007123 name: Eysarcoris trimaculatus def: "Treatment involving the exposure of plant to the pest rice spotting bug." [GR:pj] synonym: "rice spotting bug" RELATED [] is_a: EO:0007116 ! Hemiptera insect plant treatment [Term] id: EO:0007124 name: pest/pathogen/animal/plant environment def: "Treatment involving the exposure of plant to the pest/pathogen/animal/plants present as part of its growth environment." [GR:pj] is_obsolete: true [Term] id: EO:0007125 name: genetic environment def: "OBSOLETE. " [GR:pj] is_obsolete: true [Term] id: EO:0007126 name: Hirschmaniella spp. def: "Treatment involving the exposure of plant to the pest Hirschmaniella spp. It is a causal agent for rice root nematode disease." [GR:pj] is_a: EO:0007337 ! Nematoda [Term] id: EO:0007127 name: Meloidogyne spp. def: "Treatment involving the exposure of plant to the pest Meloidogyne spp. It is a causal agent for rice root knot nematode disease." [GR:pj, NCBI_taxid:189290] synonym: "root-knot nematode" RELATED [] is_a: EO:0007337 ! Nematoda [Term] id: EO:0007128 name: intermittent light regimen def: "In biological experiments it refer to the intermittent exposure of plant to the cycles of light and dark or one light Vs the another type of light." [GR:pj] is_a: EO:0007078 ! light quantity regimen [Term] id: EO:0007129 name: UV-C light regimen def: "The treatment using UV-C light either exclusively or as part of a supplemental electromagnetic radiation in the wavelength range of 280-10nm." [GR:pj] is_a: EO:0007222 ! UV light regimen [Term] id: EO:0007130 name: near infra-red light regimen def: "The treatment using infra-red light either exclusively or as part of a supplemental light of near IR band that contains energy in the range of wavelengths 750-1300nm, which is closest to the visible light." [GR:pj] synonym: "near IR light regimen" RELATED [] is_a: EO:0007202 ! IR light regimen [Term] id: EO:0007131 name: middle infra-red light regimen def: "The treatment using middle infra-red light either exclusively or as part of a supplemental light treatment involving middle IR band that contains energy in the range of wavelengths 1300-3000nm." [GR:pj] is_a: EO:0007202 ! IR light regimen [Term] id: EO:0007132 name: far infra-red light regimen def: "The treatment using far infra-red light either exclusively or as part of a supplemental light treatment involving far IR band that contains energy in the range of wavelengths 3000-14000nm." [GR:pj] is_a: EO:0007202 ! IR light regimen [Term] id: EO:0007133 name: basic pH growth media environment alt_id: EO:0007169 def: "The treatment involving an exposure to basic pH levels of the growth media." [GR:pj] synonym: "basic pH environment" RELATED [] is_a: EO:0007171 ! pH regimen [Term] id: EO:0007134 name: acidic pH growth media environment alt_id: EO:0007170 def: "The treatment involving an exposure to acidic pH levels of the growth media." [GR:pj] synonym: "acidic pH environment" RELATED [] is_a: EO:0007171 ! pH regimen [Term] id: EO:0007135 name: Magnaporthe spp. def: "The treatment involving an exposure of plant to the pathogen Magnaporthe spp." [GR:ivy, NCBI_taxid:148303] is_a: EO:0007107 ! Ascomycota treatment [Term] id: EO:0007136 name: Achlya spp. def: "The treatment involving an exposure of plant to the Achlya spp." [GR:pj, NCBI_taxid:4765] is_a: EO:0007106 ! Stramenopiles [Term] id: EO:0007137 name: Echinochloa spp. def: "The treatment involving an exposure of reference/experimental plant to monocot plant genus Echinochloa found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj, NCBI_taxid:45618] is_a: EO:0007022 ! Liliopsida [Term] id: EO:0007138 name: Echinodorus spp. def: "The treatment involving an exposure of reference/experimental plant to monocot plant genus Echinodorus found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj, NCBI_taxid:13047] synonym: "burhead" RELATED [] is_a: EO:0007022 ! Liliopsida [Term] id: EO:0007139 name: Sagittaria spp. def: "The treatment involving an exposure of reference/experimental plant to monocot plant genus Sagittaria found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj, NCBI_taxid:4450] synonym: "arrowhead" RELATED [] is_a: EO:0007022 ! Liliopsida [Term] id: EO:0007140 name: Scirpus spp. def: "The treatment involving an exposure of reference/experimental plant to monocot plant genus Scirpus found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj, NCBI_taxid:46334] is_a: EO:0007022 ! Liliopsida [Term] id: EO:0007141 name: Cyperus spp. def: "The treatment involving an exposure of reference/experimental plant to monocot plant genus Cyperus found in its growth environment. This plant may be growing as a weed or as part of normal farming practices." [GR:pj, NCBI_taxid:4610] is_a: EO:0007022 ! Liliopsida [Term] id: EO:0007142 name: Scirpophaga spp. def: "The treatment involving an exposure of plant to the pest Scirpophaga spp." [GR:pj, NCBI_taxid:72365] is_a: EO:0007114 ! Lepidoptera [Term] id: EO:0007143 name: Erwinia plant treatment def: "A bacterial plant treatment (EO:0007246) involving the exposure to bacteria of the genus Erwinia." [GR:ivy, NCBI_taxid:551] is_a: EO:0007246 ! bacterial plant treatment [Term] id: EO:0007144 name: Pseudomonas plant treatment def: "A bacterial plant treatment (EO:0007246) involving the exposure to bacteria of the genus Pseudomonas." [GR:ivy, NCBI_taxid:286] is_a: EO:0007246 ! bacterial plant treatment [Term] id: EO:0007145 name: Xanthomonas plant treatment def: "A bacterial plant treatment (EO:0007246) involving the exposure to bacteria of the genus Xanthomonas." [GR:ivy, NCBI_taxid:338] is_a: EO:0007246 ! bacterial plant treatment [Term] id: EO:0007146 name: gravity def: "The treatment involving use of gravity factor to study various types of responses in presence, absence or modified levels of gravity." [GR:pj] is_a: EO:0007316 ! physical plant treatment [Term] id: EO:0007147 name: plant growth medium def: "An abiotic plant treatment (EO:0007191) involving the use of a solid or liquid substrate for growing plants or tissue-cultured plant samples." [GR:pj, PO:cooperl] xref: OBO_SF2_EO:82 is_a: EO:0007191 ! abiotic plant treatment [Term] id: EO:0007148 name: Xanthomonas oryzae def: "The treatment involving an exposure of plant to the pathogen Xanthomonas oryzae. It is a causal agent for rice bacterial blight disease." [GR:ivy, NCBI_taxid:347] synonym: "Pseudomonas oryzae" RELATED [] is_a: EO:0007145 ! Xanthomonas plant treatment [Term] id: EO:0007149 name: chemical mutagen treatment def: "A chemical treatment (EO:0007189) involving use of mutagen for the mutagenesis process." [GR:pj, PO:cooperl] xref: OBO_SF2_EO:64 is_a: EO:0007189 ! chemical treatment [Term] id: EO:0007150 name: facultative anaerobic environment def: "OBSOLETE. " [GR:pj] is_obsolete: true [Term] id: EO:0007151 name: radiation treatment def: "A physical plant treatment (EO:0007316) involving an exposure with a radiation type, intensity or quantity." [GR:pj, PO:cooperl] comment: EMR is classified according to the frequency of its wave. The electromagnetic spectrum, in order of increasing frequency and decreasing wavelength, consists of radio waves, microwaves, infrared radiation, visible light, ultraviolet radiation, X-rays and gamma rays. (from Wikipedia). synonym: "light regimen" RELATED [] is_a: EO:0007316 ! physical plant treatment [Term] id: EO:0007152 name: radiation intensity regimen def: "The treatment involving amount of energy of any radiation incident upon (or flowing through) unit area, perpendicular to the radiation source, in unit time." [GR:pj] is_a: EO:0007151 ! radiation treatment [Term] id: EO:0007153 name: radiation quantity regimen def: "In biological experiments it refer to the treatment involving radiation in terms of length of the exposure time. It also includes the quantity of radiation falling on a per unit area. This is expressed in the units of luminous flux or the lumens." [GR:pj] is_a: EO:0007151 ! radiation treatment [Term] id: EO:0007154 name: radiation quality treatment def: "The treatment involving an exposure to a given type of radiation. Often it is in the form of electromagnetic and ionizing radiation such as light (infrared, visible or ultraviolet), x-rays, gamma rays, etc." [GR:pj] is_a: EO:0007151 ! radiation treatment [Term] id: EO:0007155 name: soil type def: "The treatment involving growing plants in different types of soil growth media." [GR:pj] is_a: EO:0007049 ! soil environment [Term] id: EO:0007156 name: clay soil is_a: EO:0007155 ! soil type [Term] id: EO:0007157 name: loam soil is_a: EO:0007155 ! soil type [Term] id: EO:0007158 name: sandy soil is_a: EO:0007155 ! soil type [Term] id: EO:0007159 name: sandy loam soil is_a: EO:0007155 ! soil type [Term] id: EO:0007160 name: water temperature regimen def: "The treatment involving an exposure to water with varying degree of temperature, which may depend on regional environment." [GR:pj] is_a: EO:0007175 ! temperature environment is_a: EO:0007198 ! water environment [Term] id: EO:0007161 name: air temperature regimen def: "The treatment involving an exposure to wind with varying degree of temperature, which may depend on the study type or the regional environment." [GR:pj] is_a: EO:0007175 ! temperature environment is_a: EO:0007382 ! wind environment [Term] id: EO:0007162 name: continuous light regimen def: "The treatment involving continuous exposure of light to the plant." [GR:pj] is_a: EO:0007078 ! light quantity regimen [Term] id: EO:0007163 name: day light regimen def: "The treatment involving an exposure of plant to the scheduled or natural exposure of day light and night cycles to the plant." [GR:pj] is_a: EO:0007128 ! intermittent light regimen [Term] id: EO:0007164 name: standing deep water def: "The treatment involving an exposure to standing water during whole life span of the plant. This also results in anaerobic soil conditions for a long period." [GR:pj] is_a: EO:0007282 ! standing water [Term] id: EO:0007165 name: growth hormone treatment def: "A chemical treatment (EO:0007189) involving the use of growth hormones to study various types of responses on their extrinsic and/or intrinsic application." [GR:pj] xref: OBO_SF2_EO:72 is_a: EO:0007189 ! chemical treatment [Term] id: EO:0007166 name: Pythium spinosum def: "The treatment involving an exposure of plant to the Pythium spinosum. It is a causal agent for rice seedling blight (fungal) or feeder root necrosis or water mold dieases. Water mold diease is also called as seed rot or seedling damping-off disease." [GR:pj, NCBI_taxid:82948] is_a: EO:0007328 ! Pythium spp. [Term] id: EO:0007167 name: pesticide treatment def: "A chemical treatment (EO:0007189) involving the application of a pesticide; a chemical entity or mixture of chemical entities." [GR:pj] xref: CHEBI:25944 xref: OBO_SF2_EO:74 is_a: EO:0007189 ! chemical treatment [Term] id: EO:0007168 name: hygromycin treatment def: "An antibiotic treatment (EO:0007041) involving use of hygromycin B antibiotic for selection purposes." [GR:pj, TO:moorel] synonym: "Antibiotic A-396-II" RELATED [] synonym: "hygromycin B regimen" RELATED [] xref: OBO_SF2_EO:70 is_a: EO:0007041 ! antibiotic treatment [Term] id: EO:0007171 name: pH regimen def: "The treatment involving exposure of plants to varying levels of pH of the growth media." [GR:pj] is_a: EO:0007189 ! chemical treatment [Term] id: EO:0007172 name: flood water def: "The treatment involving an exposure to standing water from flash floods for a small part of plant's life span. This also results in anaerobic soil conditions for a short period." [GR:pj] is_a: EO:0007282 ! standing water [Term] id: EO:0007173 name: warm/hot temperature regimen def: "The treatment involving an exposure to above optimal temperature, which may depend on the study type or the regional environment." [GR:pj] is_a: EO:0007175 ! temperature environment [Term] id: EO:0007174 name: cold temperature regimen def: "The treatment involving an exposure to cold or sub-optimal temperature, which may depend on the study type or the regional environment." [GR:pj] is_a: EO:0007175 ! temperature environment [Term] id: EO:0007175 name: temperature environment def: "A physical plant treatment (EO:0007316) involving an exposure to varying degree of temperature, which may depend on regional environment." [GR:pj] is_a: EO:0007316 ! physical plant treatment [Term] id: EO:0007176 name: altitute def: "The treatment involving an exposure to a given elevation/height above sea level." [GR:pj] is_a: EO:0007064 ! ecological environment [Term] id: EO:0007177 name: Pythium myriotylum def: "Suggests the exposure of plant to the Pythium myriotylum. It is a causal agent for rice feeder root necrosis disease." [GR:pj, NCBI_taxid:82941] is_a: EO:0007328 ! Pythium spp. [Term] id: EO:0007178 name: atmospheric pressure def: "The treatment involving an exposure to a given pressure of the atmosphere at a given point. Its measurement can be expressed in several ways. One is in millibars. Another is in inches or millimeters of mercury (Hg)." [GR:pj] synonym: "barometric pressure" RELATED [] is_a: EO:0007064 ! ecological environment [Term] id: EO:0007179 name: Pythium irregulare def: "The treatment involving exposure of plant to the Pythium irregulare. It is a causal agent for rice feeder root necrosis disease." [GR:pj, NCBI_taxid:36331] is_a: EO:0007328 ! Pythium spp. [Term] id: EO:0007180 name: 2,4-dichlorophenoxyacetic acid treatment def: "An auxin treatment (EO:0007074) involving use of 2,4-D growth hormone/herbicide to study various types of responses on its extrinsic and/or intrinsic application." [CAS:94-75-7, GR:pj] synonym: "2,4-D regimen" RELATED [] synonym: "Amidox" RELATED [CAS:94-75-7] synonym: "B-Selektonon" RELATED [CAS:94-75-7] synonym: "Crotilin" RELATED [CAS:94-75-7] synonym: "Decamine" RELATED [CAS:94-75-7] synonym: "Dicopur" RELATED [CAS:94-75-7] synonym: "U-5043" RELATED [CAS:94-75-7] synonym: "Weed Tox" RELATED [CAS:94-75-7] synonym: "Weedar 64A" RELATED [CAS:94-75-7] synonym: "Weedone-2,4-DP" RELATED [CAS:94-75-7] xref: OBO_SF2_EO:72 is_a: EO:0007074 ! auxin treatment is_a: EO:0007183 ! herbicide treatment [Term] id: EO:0007181 name: rainfall def: "The treatment involving an exposure to a given amount of rainfall." [GR:pj] is_a: EO:0007064 ! ecological environment is_a: EO:0007198 ! water environment [Term] id: EO:0007182 name: Pythium graminicola def: "The treatment involving exposure of plant to the Pythium graminicola. It is a causal agent for rice feeder root necrosis disease." [GR:pj, NCBI_taxid:82937] is_a: EO:0007328 ! Pythium spp. [Term] id: EO:0007183 name: herbicide treatment def: "A pesticide treatment (EO:0007167) involving the application of a herbicide; a chemical entity or mixture of chemical entities." [GR:pj] xref: CHEBI:24527 xref: OBO_SF2_EO:74 is_a: EO:0007167 ! pesticide treatment [Term] id: EO:0007184 name: Pythium dissotocum def: "The treatment involving exposure of plant to the Pythium dissotocum. It is a causal agent for rice seedling blight (fungal) or water mold dieases. Water mold diease is also called as seed rot or seedling damping-off disease." [GR:pj, NCBI_taxid:82936] is_a: EO:0007328 ! Pythium spp. [Term] id: EO:0007185 name: salt treatment def: "A chemical treatment (EO:0007189) involving use of salts as supplement to liquid and soil growth media to study various types of responses on their application." [GR:pj] comment: This treatment may be used to simulate the growth conditions of sea coast regions and saline/sodic soils. xref: CHEBI:24866 xref: OBO_SF2_EO:77 is_a: EO:0007189 ! chemical treatment [Term] id: EO:0007186 name: Pythium catenulatum def: "The treatment involving exposure of plant to the Pythium catenulatum. It is a causal agent for rice feeder root necrosis disease." [GR:pj, NCBI_taxid:83917] is_a: EO:0007328 ! Pythium spp. [Term] id: EO:0007187 name: salicylic acid treatment def: "An organic chemical treatment (EO:0001003) involving the application of salicylic acid (CHEBI:16914)." [CHEBI:16914, GR:pj, PO:cooperl] comment: An organic chemical treatment (EO:0001003) invloving the application of salicylic acid (CHEBI:16914). xref: OBO_SF2_EO:63 is_a: EO:0001003 ! organic chemical treatment [Term] id: EO:0007188 name: Pythium arrhenomanes def: "The treatment involving exposure of plant to the Pythium arrhenomanes. It is a causal agent for rice feeder root necrosis disease." [GR:pj, NCBI_taxid:83932] is_a: EO:0007328 ! Pythium spp. [Term] id: EO:0007189 name: chemical treatment alt_id: EO:0007042 def: "An abiotic plant treatment (EO:0007191) involving the application of chemical(s)." [GR:pj, PO:cooperl] synonym: "other chemical regimen" RELATED [] xref: OBO_SF2_EO:50 is_a: EO:0007191 ! abiotic plant treatment [Term] id: EO:0007190 name: Ustilaginoidea virens def: "The treatment involving exposure of plant to the pathogen Ustilaginoidea virens. It is a causal agent for rice False Smut Disease also called as Green Smut disease." [GR:ivy, NCBI_taxid:124427] is_a: EO:0007107 ! Ascomycota treatment [Term] id: EO:0007191 name: abiotic plant treatment def: "A plant treatment (EO:0001001) involving the application of chemical or non-biological factors." [GR:pj, PO:cooperl] xref: OBO_SF2_EO:49 is_a: EO:0001001 ! plant treatment [Term] id: EO:0007192 name: Drechslera gigantea def: "The treatment involving exposure of plant to the pathogen Drechslera gigantea. It is a causal agent for rice Eyespot disease." [GR:ivy] is_a: EO:0007107 ! Ascomycota treatment [Term] id: EO:0007193 name: day light intensity is_a: EO:0007224 ! light intensity regimen [Term] id: EO:0007194 name: Sclerospora macrospora def: "The treatment involving exposure of plant to the pathogen Sclerophthora macrospora. It is a causal agent for rice Downy Mildew disease." [GR:ivy] synonym: "Sclerophthora macrospora" RELATED [] is_a: EO:0007630 ! Sclerospora spp. [Term] id: EO:0007195 name: rice ragged stunt virus alt_id: EO:0007352 def: "The treatment involving exposure of plant to the rice ragged stunt virus. It is a causal agent for rice ragged stunt disease." [GR:ivy, NCBI_taxid:42475] synonym: "rice ragged stunt oryzavirus" RELATED [] synonym: "rice ragged stunt virus" RELATED [] synonym: "RRSV" RELATED [] is_a: EO:0007110 ! dsRNA virus [Term] id: EO:0007196 name: light regimen alt_id: EO:0007201 def: "The treatment involving day light as the light of the sun or the artificial light in a growth chamber." [GR:pj] comment: A type of light used in a commercial light box to simulate natural daylight. For experiments carried out in growth chambers, the daylight is a light source providing a color temperature of 6500+/-200 K at an illumination of 90 to 120 ft/candles. This source is typically provided by fluorescent, tungsten or halogen lamps. synonym: "artificial daylight" RELATED [] synonym: "artificial light" RELATED [] synonym: "day light" RELATED [] synonym: "natural light" RELATED [] synonym: "sun light" RELATED [] is_a: EO:0007154 ! radiation quality treatment [Term] id: EO:0007197 name: humidity regimen def: "The treatment involving an exposure to varying degree of humidity, which may depend on regional environment." [GR:pj] is_a: EO:0007198 ! water environment [Term] id: EO:0007198 name: water environment def: "A physical plant treatment (EO:0007316) involving an exposure of varying amounts of water and watering frequencies, which may depend on regional environment." [GR:pj, PO:cooperl] xref: OBO_SF2_EO:87 is_a: EO:0007316 ! physical plant treatment [Term] id: EO:0007199 name: long day length regimen def: "The treatment involving exposure of plant to long day light duration followed by a short night cycle." [GR:pj] is_a: EO:0007128 ! intermittent light regimen [Term] id: EO:0007200 name: short day length regimen def: "The treatment involving exposure of plant to short day light duration followed by a long night cycle." [GR:pj] is_a: EO:0007128 ! intermittent light regimen [Term] id: EO:0007202 name: IR light regimen def: "The treatment using infra red (IR) light either exclusively or as part of a supplemental light treatment involving IR light in the wavelength range of 700nm-1mm." [GR:pj] is_a: EO:0007196 ! light regimen [Term] id: EO:0007203 name: far red light regimen def: "The treatment using far red light either exclusively or as part of a supplemental light treatment involving red color light in the wavelength range of 800-700 nM." [GR:pj] synonym: "Pfr light" RELATED [] is_a: EO:0007196 ! light regimen [Term] id: EO:0007204 name: 1-naphthaleneacetic acid treatment def: "An auxin treatment (EO:0007074) involving use of 1-naphthaleneacetic acid growth hormone/herbicide to study various types of responses on its extrinsic and/or intrinsic application." [CAS:[68-87-3\], GR:pj] synonym: "NAA" RELATED [] synonym: "Naphthylacetic acid" RELATED [] xref: OBO_SF2_EO:72 is_a: EO:0007074 ! auxin treatment [Term] id: EO:0007205 name: rice grassy stunt 2 virus def: "The treatment involving exposure of plant to the rice grassy stunt 2 virus. It is a causal agent for rice grassy stunt disease." [GR:ivy, NCBI_taxid:66266] synonym: "RGSV-2" RELATED [] is_a: EO:0007358 ! rice grassy stunt virus [Term] id: EO:0007206 name: Gaeumannomyces graminis def: "The treatment involving exposure of plant to the pathogen Gaeumannomyces graminis. It is a causal agent for rice Crown Sheath Rot Disease also called as Arkansas Foot Rot Disease, Black Sheath Rot Disease and Brown Sheath Rot Disease." [GR:ivy, NCBI_taxid:29850] is_a: EO:0007107 ! Ascomycota treatment [Term] id: EO:0007207 name: red light regimen def: "The treatment using red light either exclusively or as part of a supplemental light treatment involving red color light in the wavelength range of 780-622 nM." [GR:pj] synonym: "Pr light" RELATED [] is_a: EO:0007221 ! visible light regimen [Term] id: EO:0007208 name: rice grassy stunt 1 virus def: "The treatment involving exposure of plant to the rice grassy stunt 1 virus. It is a causal agent for rice grassy stunt disease." [GR:ivy, NCBI_taxid:66266] synonym: "RGSV-1" RELATED [] is_a: EO:0007358 ! rice grassy stunt virus [Term] id: EO:0007209 name: Phomopsis oryzae-sativae def: "The treatment involving exposure of plant to the pathogen Phomopsis oryzae-sativae." [GR:ivy, NCBI_taxid:107452] comment: It is a causal agent for rice Collar Rot Disease. is_a: EO:0007107 ! Ascomycota treatment [Term] id: EO:0007210 name: virus plant treatment def: "A biotic plant treatment (EO:0007357) involving exposure of a plant to a virus or a combination of two or more viruses." [GR:pj, NCBI_taxid:10239, PO:cooperl] is_a: EO:0007357 ! biotic plant treatment [Term] id: EO:0007211 name: Cochliobolus miyabeanus def: "The treatment involving exposure of plant to the pathogen Cochliobolus miyabeanus. It is a causal agent for rice Brown Spot diseaseand/or Seedling Blight (Fungal) disease." [GR:ivy, NCBI_taxid:101162] synonym: "Bipolaris oryzae" RELATED [] synonym: "Dreschlera oryzae" RELATED [] synonym: "Helminthosporium oryzae" RELATED [] is_a: EO:0007055 ! Cochliobolus spp. [Term] id: EO:0007212 name: Mycoplasma def: "The treatment involving exposure of plant to the mycoplasma pest." [GR:pj, NCBI_taxid:2093] is_a: EO:0007357 ! biotic plant treatment [Term] id: EO:0007214 name: Alternaria spp. def: "The treatment involving exposure of plant to the pathogenic Alternaria sp." [GR:ivy, NCBI_taxid:5598] is_a: EO:0007107 ! Ascomycota treatment [Term] id: EO:0007215 name: orange light regimen def: "The treatment using orange light either exclusively or as part of a supplemental light treatment involving orange color light in the wavelength range of 622-597 nM." [GR:pj] is_a: EO:0007221 ! visible light regimen [Term] id: EO:0007216 name: yellow light regimen def: "The treatment using yellow light either exclusively or as part of a supplemental light treatment involving yellow color light in the wavelength range of 597-577 nM." [GR:pj] is_a: EO:0007221 ! visible light regimen [Term] id: EO:0007217 name: green light regimen def: "The treatment using green light either exclusively or as part of a supplemental light treatment involving green color light in the wavelength range of 577-492 nM." [GR:pj] is_a: EO:0007221 ! visible light regimen [Term] id: EO:0007218 name: blue light regimen def: "The treatment using blue light either exclusively or as part of a supplemental light treatment involving blue color light in the wavelength range of 492-455 nM." [GR:pj] is_a: EO:0007221 ! visible light regimen [Term] id: EO:0007219 name: indigo light regimen def: "The treatment using indigo light either exclusively or as part of a supplemental light treatment involving indigo color light in the wavelength range of 450-440 nM." [GR:pj] is_a: EO:0007221 ! visible light regimen [Term] id: EO:0007220 name: violet light regimen def: "The treatment using violet light either exclusively or as part of a supplemental light treatment involving violet color light in the wavelength range of 455-390 nM." [GR:pj] is_a: EO:0007221 ! visible light regimen [Term] id: EO:0007221 name: visible light regimen def: "The treatment using visible light in the wavelength range of 380-780 nM." [GR:pj] comment: Visible light is the portion of the electromagnetic spectrum that is visible to the human eye. The optical spectrum is a composite, or mixture, of the various colors. is_a: EO:0007196 ! light regimen [Term] id: EO:0007222 name: UV light regimen def: "The treatment using UV-B light either exclusively or as part of a supplemental light involving electromagnetic radiation in the wavelength range of 315-10nm." [GR:pj] is_a: EO:0007196 ! light regimen [Term] id: EO:0007223 name: cadmium chloride treatment def: "A cadmium treatment (EO:0001018) involving use of CdCl2 (CHEBI:35456)." [CHEBI:35456, GR:pj, PO:cooperl] comment: Can be used to assess plant response to cadmium, a heavy metal. synonym: "CdCl2" RELATED [] xref: OBO_SF2_EO:60 is_a: EO:0001018 ! cadmium treatment [Term] id: EO:0007224 name: light intensity regimen def: "The treatment involving exposure of plant or a plant part to the amount of light energy incident upon (or flowing through) unit area, perpendicular to the radiation source, in unit time." [GR:pj] is_a: EO:0007152 ! radiation intensity regimen [Term] id: EO:0007225 name: fluorine nutrient regimen def: "The treatment involving exposure of plant to fluorine as supplement to study various types of responses." [GR:pj] is_a: EO:0007047 ! other nutrient regimen [Term] id: EO:0007226 name: Magnaporthe grisea def: "The treatment involving exposure of plant to the pathogen Magnaporthe grisea. It is a causal agent for rice various forms of Blast diseases such as Collar Blast, Leaf Blast, Neck Blast, Panicle Blast and Nodal Blast disease." [GR:ivy, NCBI_taxid:148305] synonym: "Piricularia grisea" RELATED [] synonym: "Pyricularia grisea" RELATED [] synonym: "Pyricularia oryzae" RELATED [] synonym: "rice blast fungus" RELATED [] is_a: EO:0007135 ! Magnaporthe spp. [Term] id: EO:0007227 name: Cochliobolus lunatus def: "The treatment involving exposure of plant to the pathogen Cochliobolus lunatus." [GR:ivy, NCBI_taxid:5503] is_a: EO:0007055 ! Cochliobolus spp. [Term] id: EO:0007228 name: chromium nutrient regimen def: "The treatment involving exposure of plant to chromium as supplement to study various types of responses." [GR:pj] is_a: EO:0007047 ! other nutrient regimen [Term] id: EO:0007229 name: Gibberella fujikuroi alt_id: EO:0007299 def: "The treatment involving exposure of plant to the pathogen Gibberella fujikuroi." [GR:ivy, NCBI_taxid:5127] comment: It is a causal agent for rice Bakanae disease and also for a form of rice Seedling Blight (Fungal) Disease. synonym: "Fusarium fujikuroi" RELATED [] synonym: "Fusarium moniliforme" RELATED [] is_a: EO:0007118 ! Gibberella spp. [Term] id: EO:0007230 name: iodine nutrient regimen def: "The treatment involving exposure of plant to iodine as supplement to study various types of responses." [GR:pj] is_a: EO:0007047 ! other nutrient regimen [Term] id: EO:0007231 name: study type def: "A plant experimental condition (EO:0007359) or set of conditions describing what kind of plant growth facility was used for the experiment." [GR:pj, PO:cooperl] xref: OBO_SF2_EO:82 is_a: EO:0007359 ! plant experimental condition [Term] id: EO:0007232 name: selenium nutrient regimen def: "The treatment involving exposure of plant to selenium as supplement to study various types of responses." [GR:pj] is_a: EO:0007047 ! other nutrient regimen [Term] id: EO:0007233 name: fungal plant treatment def: "A biotic plant treatment (EO:0007357) involving exposure of a plant to a fungus or a combination of fungi." [GR:ivy, NCBI_taxid:4751] is_a: EO:0007357 ! biotic plant treatment [Term] id: EO:0007234 name: Pseudomonas fuscovaginae def: "The treatment involving exposure of plant to the pathogen Pseudomonas fuscovaginae. It is a causal agent for rice Sheath Brown Rot disease." [GR:ivy, NCBI_taxid:50340] synonym: "Pseudomonas fuscivaginae" RELATED [] xref: NCBI_taxid:50340 is_a: EO:0007144 ! Pseudomonas plant treatment [Term] id: EO:0007235 name: silicon nutrient regimen def: "The treatment involving exposure of plant to silicon as supplement to study various types of responses." [GR:pj] is_a: EO:0007047 ! other nutrient regimen [Term] id: EO:0007236 name: Pseudomonas plantarii def: "The treatment involving exposure of plant to the pathogen Pseudomonas plantarii. It is a causal agent for rice Seedling Blight (Bacterial) disease." [GR:ivy, NCBI_taxid:41899] synonym: "Burkholderia plantarii" RELATED [] synonym: "Burkholderia vandii" RELATED [] is_a: EO:0007144 ! Pseudomonas plant treatment [Term] id: EO:0007237 name: normal temperature regimen def: "OBSOLETE. " [GR:pj] is_obsolete: true [Term] id: EO:0007238 name: optimal temperature regimen def: "OBSOLETE. " [GR:pj] is_obsolete: true [Term] id: EO:0007239 name: micronutrient regimen def: "The treatment involving exposure of plant to elements that are required in tiny quantities for growth, as supplement to study various types of responses." [GR:pj] synonym: "trace element regimen" RELATED [] is_a: EO:0007241 ! plant nutrient treatment [Term] id: EO:0007240 name: plant macronutrient regimen def: "A plant nutrient treatment (EO:0007241) involving the use of a plant macronutrient or combination of plant macronutrients." [GR:pj, PO:cooperl] comment: The macronutrients comprise the elements required by the plant in relatively large quantities for normal growth. is_a: EO:0007241 ! plant nutrient treatment [Term] id: EO:0007241 name: plant nutrient treatment def: "A plant chemical treatment (EO:0007189) involving a plant nutrient or a combination of plant nutrients." [GR:pj, PO:cooperl] synonym: "fertilizer regimen" BROAD [] xref: OBO_SF2_EO:85 is_a: EO:0007189 ! chemical treatment [Term] id: EO:0007242 name: iron nutrient regimen def: "The treatment involving exposure of plant to micronutrient iron as supplement to study various types of responses." [GR:pj] is_a: EO:0007239 ! micronutrient regimen [Term] id: EO:0007243 name: Pseudomonas glumae def: "The treatment involving exposure of plant to the pathogen Pseudomonas glumae. It is a causal agent for rice Grain Rot disease." [GR:ivy, NCBI_taxid:337] synonym: "Burkholderia glumae" RELATED [] is_a: EO:0007144 ! Pseudomonas plant treatment [Term] id: EO:0007244 name: chlorine nutrient regimen def: "The treatment involving exposure of plant to micronutrient chlorine as supplement to study various types of responses." [GR:pj] is_a: EO:0007239 ! micronutrient regimen [Term] id: EO:0007245 name: Erwinia chrysanthemi def: "The treatment involving exposure of plant to the pathogen Erwinia chrysanthemi. It is a causal agent for rice Foot Rot disease." [GR:ivy, NCBI_taxid:556] is_a: EO:0007143 ! Erwinia plant treatment [Term] id: EO:0007246 name: bacterial plant treatment def: "A biotic plant treatment (EO:0007357) involving exposure of a plant to bacteria." [GR:ivy, NCBI_taxid:2, PO:cooperl] synonym: "eubacteria" RELATED [] is_a: EO:0007357 ! biotic plant treatment [Term] id: EO:0007247 name: Erwinia herbicola def: "The treatment involving exposure of plant to the pathogen Erwinia herbicola. The susceptible plants suffer from Bacterial Palea Browning disease." [GR:ivy, NCBI_taxid:549] synonym: "Pantoea agglomerans" RELATED [] is_a: EO:0007143 ! Erwinia plant treatment [Term] id: EO:0007248 name: green house study def: "The treatment where the plants were grown under green house conditions. This may involve supplemental treatments in addition to any standard conditions." [GR:pj] is_a: EO:0007231 ! study type [Term] id: EO:0007249 name: Xanthomonas oryzae pv. oryzicola def: "The treatment involving exposure of plant to the pathogen Xanthomonas oryzae pv. oryzicola. It is a causal agent for rice bacterial blight disease." [GR:ivy, NCBI_taxid:129394] synonym: "Xanthomonas campestris pv. oryzicola" RELATED [] is_a: EO:0007148 ! Xanthomonas oryzae [Term] id: EO:0007250 name: Recilia dorsalis def: "The treatment involving exposure of plant to the pest zigzag leafhopper." [GR:pj] synonym: "zigzag leafhopper" RELATED [] is_a: EO:0007116 ! Hemiptera insect plant treatment [Term] id: EO:0007251 name: Pseudomonas syringae pv. panici def: "The treatment involving exposure of plant to the pathogen Pseudomonas syringae pathovar panici." [GR:ivy] comment: It is a causal agent for rice Bacterial Brown Stripe disease. is_a: EO:0001034 ! Pseudomonas syringae plant treatment [Term] id: EO:0007252 name: Sogatella furcifera def: "The treatment involving exposure of plant to the pest white-backed planthopper." [GR:pj, NCBI_taxid:113103] synonym: "white-backed planthopper" RELATED [] is_a: EO:0007116 ! Hemiptera insect plant treatment [Term] id: EO:0007253 name: molybdenum nutrient regimen def: "The treatment involving exposure of plant to micronutrient molybdenum as supplement to study various types of responses." [GR:pj] is_a: EO:0007239 ! micronutrient regimen [Term] id: EO:0007254 name: Pseudomonas avenae def: "The treatment involving exposure of plant to the pathogen Pseudomonas avenae. It is a causal agent for rice Bacterial Brown Stripe disease." [GR:ivy, NCBI_taxid:80867] synonym: "Acidovorax avenae" RELATED [] is_a: EO:0007144 ! Pseudomonas plant treatment [Term] id: EO:0007255 name: laboratory study def: "The treatment where the plants were grown under laboratory / open room conditions, with very few controlled parameters. This may involve supplemental treatments in addition to any naturally occurring conditions." [GR:pj] is_a: EO:0007231 ! study type [Term] id: EO:0007256 name: field study def: "The treatment where the plants were grown under field conditions. This may involve supplemental treatments in addition to any naturally occurring conditions." [GR:pj] synonym: "open field study" RELATED [] is_a: EO:0007231 ! study type [Term] id: EO:0007257 name: Xanthomonas oryzae pv. oryzae def: "The treatment involving exposure of plant to the pathogen Xanthomonas oryzae pv. oryzae. It is a causal agent for rice bacterial blight disease." [GR:ivy, NCBI_taxid:64187] synonym: "Xanthomonas campestris pv. oryza" RELATED [] is_a: EO:0007148 ! Xanthomonas oryzae [Term] id: EO:0007258 name: Oebalus pugnax def: "The treatment involving exposure of plant to the pest rice stink bug." [GR:pj] synonym: "rice stink bug" RELATED [] is_a: EO:0007116 ! Hemiptera insect plant treatment [Term] id: EO:0007259 name: soil water content def: "The treatment involving an exposure to varying amounts of water in soil growth media." [GR:pj] is_a: EO:0007049 ! soil environment is_a: EO:0007198 ! water environment [Term] id: EO:0007260 name: Diopsis macrophthalma def: "The treatment involving exposure of plant to the pest commonly calles as rice stem borer." [GR:pj] synonym: "rice stem borer" RELATED [] synonym: "stalked-eyed fly" RELATED [] is_a: EO:0007119 ! Dipteran insect plant treatment [Term] id: EO:0007261 name: copper nutrient regimen def: "The treatment involving exposure of plant to micronutrient copper as supplement to study various types of responses." [GR:pj] is_a: EO:0007239 ! micronutrient regimen [Term] id: EO:0007262 name: in vitro solid growth medium def: "An in vitro growth medium (EO:0007266) involving use of a solid growth medium as a substrate." [GR:pj, PO:cooperl] xref: OBO_SF2_EO:65 is_a: EO:0007266 ! in vitro growth medium [Term] id: EO:0007263 name: Maliarpha separatella def: "The treatment involving exposure of plant to the pest white rice borer." [GR:pj] synonym: "African white stemborer" RELATED [] synonym: "African whiteheads" RELATED [] synonym: "white rice borer" RELATED [] is_a: EO:0007114 ! Lepidoptera [Term] id: EO:0007264 name: Sesamia inferens def: "The treatment involving exposure of plant to the pest purple stem borer." [GR:pj] synonym: "pink stem borer" RELATED [] synonym: "purple borer" RELATED [] synonym: "purple stem borer" RELATED [] is_a: EO:0007114 ! Lepidoptera [Term] id: EO:0007265 name: in vitro liquid growth medium def: "An in vitro growth medium (EO:0007265) involving use of liquid culture media as a substrate." [GR:pj, PO:cooperl] xref: OBO_SF2_EO:65 is_a: EO:0007266 ! in vitro growth medium [Term] id: EO:0007266 name: in vitro growth medium def: "A growth medium environment (EO:0007147) for in vitro culture, involving use of a solid or liquid substrate and which may include nutrients and other amendments." [GR:pj, PO:cooperl] xref: OBO_SF2_EO:65 is_a: EO:0007147 ! plant growth medium [Term] id: EO:0007267 name: benzothiadiazole treatment def: "A fungicide treatment (EO:0007268) involving use of benzothiadiazole to study various types of responses on its application." [GR:pj] xref: CHEBI:48864 xref: OBO_SF2_EO:76 is_a: EO:0007268 ! fungicide treatment [Term] id: EO:0007268 name: fungicide treatment def: "A pesticide treatment (EO:0007167) involving the application of a fungicide; a chemical entity or mixture of chemical entities." [GR:pj] xref: CHEBI:24127 xref: OBO_SF2_EO:74 is_a: EO:0007167 ! pesticide treatment [Term] id: EO:0007269 name: growth chamber study def: "The treatment involving study type in which plants were grown in growth chambers." [GR:pj] is_a: EO:0007231 ! study type [Term] id: EO:0007270 name: continuous dark (no light) regimen def: "The treatment involving continuous exposure to darkness (no light) to the plant." [GR:pj] synonym: "continuous night regimen" RELATED [] is_a: EO:0007078 ! light quantity regimen [Term] id: EO:0007271 name: low light intensity regimen is_a: EO:0007224 ! light intensity regimen [Term] id: EO:0007272 name: Scirpophaga innotata def: "The treatment involving exposure of plant to the pest Scirpophaga innotata." [GR:pj] synonym: "Tipanaea sericea" RELATED [] synonym: "white rice stemborer" RELATED [] synonym: "white stemborer" RELATED [] is_a: EO:0007142 ! Scirpophaga spp. [Term] id: EO:0007273 name: boron nutrient regimen def: "The treatment involving exposure of plant to micronutrient boron as supplement to study various types of responses." [GR:pj] is_a: EO:0007239 ! micronutrient regimen [Term] id: EO:0007274 name: Scirpophaga incertulas def: "The treatment involving exposure of plant to the pest Scirpophaga incertulas." [GR:pj] synonym: "yellow stem borer" RELATED [] xref: NCBI_taxid:72366 is_a: EO:0007142 ! Scirpophaga spp. [Term] id: EO:0007275 name: Rupela albinella def: "The treatment involving exposure of plant to the pest rice stemborer, Rupela albinella." [GR:pj] synonym: "rice stemborer" RELATED [] is_a: EO:0007114 ! Lepidoptera [Term] id: EO:0007276 name: cobalt nutrient regimen def: "The treatment involving exposure of plant to cobalt as supplement to study various types of responses." [GR:pj] is_a: EO:0007047 ! other nutrient regimen [Term] id: EO:0007277 name: Chilo polychrysus def: "The treatment involving exposure of plant to the pest dark-headed stemborer." [GR:pj] synonym: "dark-headed stemborer" RELATED [] is_a: EO:0007122 ! Chilo [Term] id: EO:0007278 name: oxygen regimen def: "The treatment involving exposure of plant to oxygen to study various types of responses." [GR:pj] is_a: EO:0007043 ! non-mineral nutrient regimen [Term] id: EO:0007279 name: Chilo suppressalis def: "The treatment involving exposure of plant to the pest rice striped stemborer." [GR:pj, NCBI_taxid:168631] synonym: "Asiatic rice borer" RELATED [] synonym: "striped stemborer" RELATED [] is_a: EO:0007122 ! Chilo [Term] id: EO:0007280 name: unknown study type def: "The treatment involving study type where nothing is known in the reported literature/study about the kind of growth facilities used." [GR:pj] is_a: EO:0007231 ! study type [Term] id: EO:0007281 name: obsolete environment term def: "The treatment involving the terms that are no longer in use or were deleted are placed under this parent term." [GR:pj] is_obsolete: true [Term] id: EO:0007282 name: standing water def: "The treatment involving an exposure to standing water during a plant's life span. This also results in anaerobic soil conditions for a either long or short periods." [GR:pj] is_a: EO:0007198 ! water environment [Term] id: EO:0007283 name: Stenchaetothrips biformis def: "The treatment involving exposure of plant to the pest commonly called as oriental rice thrips." [GR:pj] synonym: "oriental rice thrips" RELATED [] synonym: "rice thrips" RELATED [] is_a: EO:0007121 ! Thysanoptera [Term] id: EO:0007284 name: nitrogen macronutrient regimen def: "A primary plant macronutrient regimen (EO:0007045) involving the application of nitrogen." [GR:pj, PO:cooperl] xref: OBO_SF2_EO:3 is_a: EO:0007045 ! primary plant macronutrient regimen [Term] id: EO:0007285 name: rainy season alt_id: EO:0007032 def: "The treatment involving an exposure to the wet or the rainy season." [GR:pj] synonym: "monsoon season" RELATED [] synonym: "wet season" RELATED [] is_a: EO:0007027 ! seasonal environment [Term] id: EO:0007286 name: dry season def: "The treatment involving an exposure to the dry season." [GR:pj] is_a: EO:0007027 ! seasonal environment [Term] id: EO:0007287 name: dibromothymoquinone treatment def: "An herbicide treatment (EO:0007183) involving the use of dibromothymoquinone (DBMIB)." [GR:pj, TO:moorel] comment: DBMIB blocks the oxidation of plastoquinol in the photosynthetic light reaction and keeps the plastoquinone pool reduced. synonym: "2,5-dibromo -6-isopropyl-3-methyl-1,4-benzoquinone" RELATED [] xref: CHEBI:19371 xref: OBO_SF2_EO:75 is_a: EO:0007183 ! herbicide treatment [Term] id: EO:0007288 name: magnesium nutrient regimen def: "The treatment involving exposure of plant to macronutrient magnesium as supplement to study various types of responses." [GR:pj] xref: OBO_SF_EO:3609197 is_a: EO:0007046 ! secondary macronutrient [Term] id: EO:0007289 name: Hydrellia philippina def: "The treatment involving exposure of plant to the pest rice whorl maggot." [GR:pj] synonym: "rice whorl maggot" RELATED [] is_a: EO:0007119 ! Dipteran insect plant treatment [Term] id: EO:0007290 name: kinetin treatment def: "A cytokinin treatment (EO:0007066) involving use of kinetin, a cytokinin homolog to study various types of responses on its extrinsic and/or intrinsic application." [GR:pj] xref: OBO_SF2_EO:72 is_a: EO:0007066 ! cytokinin treatment [Term] id: EO:0007291 name: benzyladenine treatment def: "A cytokinin treatment (EO:0007066) involving use of benzyladenine a cytokinin homolog to study various types of responses on its extrinsic and/or intrinsic application." [CAS:[1214-39-7\], GR:pj, web:http\://en.wikipedia.org/wiki/6-Benzylaminopurine] comment: It is a first-generation synthetic cytokinin which elicits plant growth and development responses, setting blossoms and stimulating fruit richness by stimulating cell division. It is an inhibitor of respiratory kinase in plants, and increases post-harvest life of green vegetables. synonym: "6-benzylaminopurine" RELATED [] synonym: "BAP" RELATED [] synonym: "Benzylaminopurine" RELATED [] synonym: "N-(Phenylmethyl)-1H-purin-6-amine" RELATED [] synonym: "N-benzyl-adenine" RELATED [] synonym: "verdan senescence inhibitor" RELATED [] xref: OBO_SF2_EO:72 is_a: EO:0007066 ! cytokinin treatment [Term] id: EO:0007292 name: ethylphosphine treatment def: "An herbicide treatment (EO:0007183) involving the use of ethylphosphine (CCP)." [TO:moorel] synonym: "carbonyl cyanide phenylhydrazone" RELATED [] synonym: "carbonylcyanide-m-chlorophenylhydrazone" RELATED [] xref: CHEBI:35889 xref: OBO_SF2_EO:75 is_a: EO:0007183 ! herbicide treatment [Term] id: EO:0007293 name: potassium nutrient regimen def: "The treatment involving exposure of plant to macronutrient potassium as supplement to study various types of responses." [GR:pj] is_a: EO:0007045 ! primary plant macronutrient regimen [Term] id: EO:0007294 name: Pelopidas mathias def: "The treatment involving exposure of plant to the pest Pelopidas mathias." [GR:pj] synonym: "black branded swift" RELATED [] synonym: "lesser millet skipper" RELATED [] synonym: "small branded swift" RELATED [] is_a: EO:0007114 ! Lepidoptera [Term] id: EO:0007295 name: sulfur nutrient regimen def: "The treatment involving exposure of plant to macronutrient sulfur as supplement to study various types of responses." [GR:pj] is_a: EO:0007046 ! secondary macronutrient [Term] id: EO:0007296 name: Dicladispa armigera def: "The treatment involving exposure of plant to the pest Dicladispa armigera." [GR:pj, NCBI_taxid:111238] synonym: "rice hispa" RELATED [] is_a: EO:0007120 ! Coleoptera [Term] id: EO:0007297 name: calcium nutrient regimen def: "The treatment involving exposure of plant to macronutrient calcium as supplement to study various types of responses." [GR:pj] is_a: EO:0007046 ! secondary macronutrient [Term] id: EO:0007298 name: Sogatodes oryzicola def: "The treatment involving exposure of plant to the pest rice delpahcid." [GR:pj] synonym: "rice delpahcid" RELATED [] synonym: "Tagosodes orizicolus" RELATED [] is_a: EO:0007116 ! Hemiptera insect plant treatment [Term] id: EO:0007300 name: Leptocorisa oratorius def: "The treatment involving exposure of plant to the pest paddy bug." [GR:pj] synonym: "paddy bug" RELATED [] synonym: "rice bug" RELATED [] is_a: EO:0007116 ! Hemiptera insect plant treatment [Term] id: EO:0007302 name: T-DNA insert def: "The treatment involving use of T-DNA in the flanking regions of a DNA insert for mutagenesis process." [GR:pj] is_a: EO:0007532 ! DNA [Term] id: EO:0007303 name: carbon nutrient regimen def: "The treatment involving exposure of plant to carbon source as supplement to study various types of responses." [GR:pj] is_a: EO:0007043 ! non-mineral nutrient regimen [Term] id: EO:0007304 name: Marasmia patnalis def: "The treatment involving exposure of plant to the pest Marasmia patnalis ." [GR:pj] synonym: "leaffolder" RELATED [] is_a: EO:0007114 ! Lepidoptera [Term] id: EO:0007305 name: Cnaphalocrocis medinalis def: "The treatment involving exposure of plant to the pest Cnaphalocrocis medinalis." [GR:pj] synonym: "defloiator" RELATED [] synonym: "leaffolder" RELATED [] synonym: "rice leaffolder" RELATED [] is_a: EO:0007114 ! Lepidoptera [Term] id: EO:0007306 name: aluminum nutrient regimen def: "The treatment involving exposure of plant to aluminium as supplement to study various types of responses." [GR:pj] is_a: EO:0007047 ! other nutrient regimen [Term] id: EO:0007307 name: transposable element insert def: "The treatment involving use of transposable element as an insert for mutagenesis process." [GR:pj] synonym: "TE insert" RELATED [] is_a: EO:0007532 ! DNA [Term] id: EO:0007308 name: Nephotettix spp def: "The treatment involving exposure of plant to the pest green leaf hopper." [GR:pj, NCBI_taxid:94399] synonym: "green leafhopper" RELATED [] is_a: EO:0007116 ! Hemiptera insect plant treatment [Term] id: EO:0007309 name: zinc nutrient regimen def: "The treatment involving exposure of plant to micronutrient zinc as supplement to study various types of responses." [GR:pj] is_a: EO:0007239 ! micronutrient regimen [Term] id: EO:0007310 name: Ac/Ds transposable element def: "The treatment involving use of Ac/Ds transposable system for mutagenesis process." [GR:pj] is_a: EO:0007307 ! transposable element insert [Term] id: EO:0007311 name: Orseolia oryzae def: "The treatment involving exposure of plant to the pest rice gall midge." [GR:pj, NCBI_taxid:33408] synonym: "Asian rice gall midge" RELATED [] synonym: "gall midge" RELATED [] is_a: EO:0007119 ! Dipteran insect plant treatment [Term] id: EO:0007312 name: Tos-17 transposable element def: "The use of Tos-17 transposable element for mutagenesis process." [GR:pj] is_a: EO:0007307 ! transposable element insert [Term] id: EO:0007313 name: Pseudaletia separata def: "The treatment involving exposure of plant to the pest Pseudaletia separata." [GR:pj] synonym: "armyworm" RELATED [] xref: NCBI_taxid:7105 is_a: EO:0007117 ! Pseudaletia spp. [Term] id: EO:0007314 name: Nymphula depunctalis def: "The treatment involving exposure of plant to the pest rice caseworm." [GR:pj] synonym: "caseworm" RELATED [] synonym: "rice caseworm" RELATED [] is_a: EO:0007114 ! Lepidoptera [Term] id: EO:0007315 name: zero gravity def: "The treatment involving use of gravity factor to study various types of responses in the absence of gravity or space like conditions." [GR:pj] is_a: EO:0007146 ! gravity [Term] id: EO:0007316 name: physical plant treatment def: "An abiotic plant treatment (EO:0007191) involving the application of a physical factor such as temperature, moisture, gravity, wind, radiation, etc. or a combination thereof." [PO:cooperl] xref: OBO_SF2_EO:78 is_a: EO:0007191 ! abiotic plant treatment [Term] id: EO:0007317 name: Nilaparvata lugens def: "The treatment involving exposure of plant to the pest brown planthopper." [GR:pj, NCBI_taxid:108931] synonym: "brown planthopper" RELATED [] is_a: EO:0007116 ! Hemiptera insect plant treatment [Term] id: EO:0007318 name: rice yellow mottle virus def: "The treatment involving exposure of plant to the rice yellow mottle virus. It is a causal agent for rice yellow mottle disease." [GR:ivy, NCBI_taxid:31744] synonym: "RYMV" RELATED [] is_a: EO:0007109 ! ssRNA positive-strand virus with no DNA stage [Term] id: EO:0007319 name: warm/hot air temperature regimen def: "The treatment involving an exposure to above optimal air temperature, which may depend on the study type or the regional environment." [GR:pj] is_a: EO:0007161 ! air temperature regimen is_a: EO:0007173 ! warm/hot temperature regimen [Term] id: EO:0007320 name: Meloidogyne arenaria def: "The treatment involving exposure of plant to the pest Meloidogyne oryzae. It is a causal agent for rice root knot nematode disease." [GR:pj, NCBI_taxid:6304] is_a: EO:0007127 ! Meloidogyne spp. [Term] id: EO:0007321 name: Hirschmaniella spinicaudata def: "The treatment involving exposure of plant to the pest Hirschmaniella spinicaudata. It is a causal agent for rice root nematode disease." [GR:pj] is_a: EO:0007126 ! Hirschmaniella spp. [Term] id: EO:0007322 name: Hirschmaniella oryzae def: "The treatment involving exposure of plant to the pest Hirschmaniella oryzae. It is a causal agent for rice root nematode disease." [GR:pj] is_a: EO:0007126 ! Hirschmaniella spp. [Term] id: EO:0007323 name: Hirschmaniella mucronata def: "The treatment involving exposure of plant to the pest Hirschmaniella mucronata. It is a causal agent for rice root nematode disease." [GR:pj] is_a: EO:0007126 ! Hirschmaniella spp. [Term] id: EO:0007324 name: Hirschmaniella imamuri def: "The treatment involving exposure of plant to the pest Hirschmaniella imamuri. It is a causal agent for rice root nematode disease." [GR:pj] synonym: "rice root nematode" RELATED [] is_a: EO:0007126 ! Hirschmaniella spp. [Term] id: EO:0007325 name: Hirschmaniella caudacrena def: "The treatment involving exposure of plant to the pest Hirschmaniella imamuri. It is a causal agent for rice root nematode disease." [GR:pj] is_a: EO:0007126 ! Hirschmaniella spp. [Term] id: EO:0007326 name: mycoplasma like organism def: "The treatment involving exposure of plant to the pest mycoplasma like organism." [GR:pj] synonym: "MLO" RELATED [] is_a: EO:0007212 ! Mycoplasma [Term] id: EO:0007327 name: Mycovellosiella oryzae def: "The treatment involving exposure of plant to the pathogen Mycovellosiella oryzae. It is a causal agent for rice White Leaf Streak Disease." [GR:ivy] synonym: "Ramularia oryzae" RELATED [] is_a: EO:0007107 ! Ascomycota treatment [Term] id: EO:0007328 name: Pythium spp. def: "The treatment involving exposure of plant to the heterokont Pythium." [GR:pj, NCBI_taxid:4797] is_a: EO:0007106 ! Stramenopiles [Term] id: EO:0007329 name: Spodoptera praefica def: "The treatment involving exposure of plant to the pest commonly called as western yellowstriped armyworm." [GR:pj] synonym: "western yellowstriped armyworm" RELATED [] is_a: EO:0007115 ! Spodoptera spp. [Term] id: EO:0007330 name: Spodoptera mauritia def: "The treatment involving exposure of plant to the pest commonly calles as lawn armyworm." [GR:pj] synonym: "lawn armyworm" RELATED [] synonym: "Prodenia acronyctoides" RELATED [] is_a: EO:0007115 ! Spodoptera spp. [Term] id: EO:0007331 name: Pseudaletia unipuncta def: "The treatment involving exposure of plant to the pest Pseudaletia unipuncta." [GR:pj] synonym: "armyworm" RELATED [] xref: NCBI_taxid:42880 is_a: EO:0007117 ! Pseudaletia spp. [Term] id: EO:0007332 name: cold air temperature regimen def: "The treatment involving an exposure to cold or sub-optimal air temperature, which may depend on the study type or the regional environment." [GR:pj] is_a: EO:0007161 ! air temperature regimen is_a: EO:0007174 ! cold temperature regimen [Term] id: EO:0007333 name: insect plant treatment def: "A metazoan plant treatment (EO:0007349) involving exposure of a plant to an insect or a mixture of insects." [GR:pj, NCBI_taxid:50557, PO:cooperl] synonym: "insect" RELATED [] synonym: "true insects" RELATED [] is_a: EO:0007349 ! metazoan plant treatment [Term] id: EO:0007334 name: Pomacea canaliculata def: "The treatment involving exposure of plant to the pest Pomacea canaliculata." [GR:pj] synonym: "apple snail" RELATED [] synonym: "golden apple snail" RELATED [] is_a: EO:0007335 ! Mollusca [Term] id: EO:0007335 name: Mollusca def: "The treatment involving exposure of plant to the pest molluscs." [GR:pj, NCBI_taxid:6447] synonym: "mollusc" RELATED [] synonym: "mollusk" RELATED [] is_a: EO:0007349 ! metazoan plant treatment [Term] id: EO:0007336 name: Ditylenchus angustus def: "The treatment involving exposure of plant to the pest Ditylenchus angustus. It is a causal agent for rice Ufra disease." [GR:ivy] synonym: "rice stem nematode" RELATED [] synonym: "ufra nematode" RELATED [] is_a: EO:0007337 ! Nematoda [Term] id: EO:0007337 name: Nematoda def: "The treatment involving exposure of plant to the nematode pests." [GR:pj, NCBI_taxid:6231] synonym: "round worm" RELATED [] synonym: "roundworm" RELATED [] is_a: EO:0007349 ! metazoan plant treatment [Term] id: EO:0007338 name: cold water temperature regimen def: "The treatment involving an exposure to cold or sub-optimal water temperature, which may depend on the study type or the regional environment." [GR:pj] is_a: EO:0007160 ! water temperature regimen is_a: EO:0007174 ! cold temperature regimen [Term] id: EO:0007339 name: rice tungro spherical virus def: "The treatment involving exposure of plant to the rice tungro spherical virus. It is a causal agent for rice tungro disease, which is also called as Mentek or Waika diease." [GR:ivy, NCBI_taxid:35287] synonym: "rice leaf yellowing virus" RELATED [] synonym: "rice penyakit mentek virus" RELATED [] synonym: "rice tungro spherical waikavirus" RELATED [] synonym: "rice waika virus" RELATED [] synonym: "rice yellow leaf virus" RELATED [] synonym: "RTSV" RELATED [] synonym: "tungro virus" RELATED [] is_a: EO:0007109 ! ssRNA positive-strand virus with no DNA stage [Term] id: EO:0007340 name: Achlya conspicua def: "The treatment involving exposure of plant to the heterokont Achlya conspicua. It is a causal agent for rice water mold diease which is also called as seed rot or seedling damping-off disease." [GR:pj, NCBI_taxid:112027] is_a: EO:0007136 ! Achlya spp. [Term] id: EO:0007341 name: Fusarium alt_id: EO:0007301 def: "The treatment involving exposure of plant to the pathogenic Fusarium spp. It is a causal agent for rice Water Mold disease also called as Seed Rot Disease or Seedling Damping-off Disease." [GR:ivy, NCBI_taxid:5506] synonym: "Fusarium spp." RELATED [] is_a: EO:0007118 ! Gibberella spp. [Term] id: EO:0007342 name: Achlya klebsiana def: "The treatment involving exposure of plant to the heterokont Achlya klebsiana. It is a causal agent for rice water mold diease which is also called as seed rot or seedling damping-off disease." [GR:pj, NCBI_taxid:4767] is_a: EO:0007136 ! Achlya spp. [Term] id: EO:0007343 name: Bovinae def: "The treatment involving exposure of plant to the cattle." [GR:pj, NCBI_taxid:27592] synonym: "cattle" RELATED [] is_a: EO:0007031 ! Mammalia [Term] id: EO:0007344 name: rice tungro bacilliform virus def: "The treatment involving exposure of plant to the rice tungro bacilliform virus. It is a causal agent for rice tungra disease which is also called as Mentek or Waika disease." [GR:ivy, NCBI_taxid:10654] synonym: "rice yellow orange leaf virus" RELATED [] synonym: "RTBV" RELATED [] is_a: EO:0007112 ! retroid virus [Term] id: EO:0007345 name: Rodentia def: "The treatment involving exposure of plant to the pest rats and mouse." [GR:pj, NCBI_taxid:9989] synonym: "mouse" RELATED [] synonym: "rat" RELATED [] synonym: "rodent" RELATED [] is_a: EO:0007031 ! Mammalia [Term] id: EO:0007346 name: rice yellow stunt virus def: "The treatment involving exposure of plant to the rice yellow stunt virus. It is a causal agent for rice transitory yellowing disease." [GR:ivy, NCBI_taxid:59380] synonym: "rice transitory yellowing virus" RELATED [] synonym: "rice yellow stunt rhabdovirus" RELATED [] synonym: "RTYV" RELATED [] synonym: "RYSV" RELATED [] is_a: EO:0007111 ! ssRNA negative-strand virus [Term] id: EO:0007347 name: Aves def: "The treatment involving exposure of plants to the birds." [GR:pj, NCBI_taxid:8782] synonym: "bird" RELATED [] is_a: EO:0007349 ! metazoan plant treatment [Term] id: EO:0007348 name: rice stripe necrosis virus def: "The treatment involving exposure of plant to the rice stripe necrosis virus. It is a causal agent for rice stripe necrosis disease." [GR:ivy] synonym: "RSNV" RELATED [] is_a: EO:0007109 ! ssRNA positive-strand virus with no DNA stage [Term] id: EO:0007349 name: metazoan plant treatment def: "A biotic plant treatment (EO:0007357) involving exposure of a plant to a metazoan organism (animal)." [GR:pj, NCBI_taxid:33208, PO:cooperl] synonym: "Animalia" RELATED [] is_a: EO:0007357 ! biotic plant treatment [Term] id: EO:0007350 name: rice stripe virus def: "The treatment involving exposure of plant to the rice stripe virus. It is a causal agent for rice stripe disease." [GR:ivy, NCBI_taxid:12331] synonym: "RSV" RELATED [] is_a: EO:0007111 ! ssRNA negative-strand virus [Term] id: EO:0007351 name: genetic background def: "OBSOLETE. " [GR:pj] is_obsolete: true [Term] id: EO:0007353 name: germplasm def: "OBSOLETE. " [GR:pj] is_obsolete: true [Term] id: EO:0007355 name: genotype def: "OBSOLETE. " [GR:pj] is_obsolete: true [Term] id: EO:0007356 name: rice hoja blanca virus def: "The treatment involving exposure of plant to the rice hoja blanca virus. It is a causal agent for rice hoja blanca disease." [GR:ivy, NCBI_taxid:12332] synonym: "hoja blanca" RELATED [] synonym: "rice hoja blanca tenuivirus" RELATED [] is_a: EO:0007111 ! ssRNA negative-strand virus [Term] id: EO:0007357 name: biotic plant treatment def: "A plant treatment (EO:0001001) involving the application of a biotic or biological factor such as a microbe, insect, animal, or plant or a combination thereof." [GR:pj, PO:cooperl] xref: OBO_SF2_EO:79 is_a: EO:0001001 ! plant treatment [Term] id: EO:0007358 name: rice grassy stunt virus def: "The treatment involving exposure of plant to the rice grassy stunt virus. It is a causal agent for rice grassy stunt disease." [GR:ivy, NCBI_taxid:66266] synonym: "RGSV" RELATED [] is_a: EO:0007111 ! ssRNA negative-strand virus [Term] id: EO:0007359 name: plant experimental condition def: "A plant treatment (EO:0001001) and/or study type (EO:0007231) applied to a whole plant (PO:0000003), a plant structure (PO:00090119), and/or a plant population as part of an experiment to evaluate the plant response." [GR:pj, PO:cooperl] comment: The Plant Environment Ontology describes the treatments,growing conditions, and/or study types used in various types of plant biology experiments. The subjects of the studies may also include in vitro\nplant structures (PO:0000004). A plant treatment is the most specific,and may be a component of a plant growing condition, and the plant study type. The broadest classes are the plant study types where the terms can be used to identify the growth study facility. Each growth facility such as field study, growth chamber, green house etc is a environment on its own and it may also involve instances of biotic and abiotic treatments and different growing conditions. synonym: "plant treatment ontology" RELATED [] synonym: "treatment ontology" RELATED [] xref: OBO_SF2_EO:4 [Term] id: EO:0007360 name: barley yellow dwarf virus def: "The treatment involving exposure of plant to the barley yellow dwarf virus. It is a causal agent for rice Giallume disease." [GR:ivy, NCBI_taxid:12037] synonym: "BYDV" RELATED [] is_a: EO:0007109 ! ssRNA positive-strand virus with no DNA stage [Term] id: EO:0007361 name: rice gall dwarf virus def: "The treatment involving exposure of plant to the rice gall dwarf virus. It is a causal agent for rice gall dwarf disease." [GR:ivy] synonym: "RGDV" RELATED [] synonym: "rice gall dwarf virus RGDV" RELATED [] is_a: EO:0007110 ! dsRNA virus [Term] id: EO:0007362 name: Balansia oryzae-sativae def: "The treatment involving exposure of plant to the pathogen Balansia oryzae-sativae. It is a causal agent for rice Udbatta diesase which is also called as Black Choke Disease, False Ergot Disease, Incense Rod Disease." [GR:ivy, NCBI_taxid:116609] synonym: "Ephelis japonica" RELATED [] synonym: "Ephelis oryzae" RELATED [] is_a: EO:0007107 ! Ascomycota treatment [Term] id: EO:0007363 name: Magnaporthe salvinii alt_id: EO:0007213 def: "The treatment involving exposure of plant to the pathogen Magnaporthe salvinii. It is a causal agent for rice stem rot disease and Seedling Blight (Fungal) Disease." [GR:ivy, NCBI_taxid:165778] synonym: "Helminthosporium sigmoideum" RELATED [] synonym: "Helminthosporium sigmoideum var.irregulare." RELATED [] synonym: "Leptosphaeria salvinii" RELATED [] synonym: "Nakataea sigmoidae" RELATED [] synonym: "Sclerotium oryzae" RELATED [] is_a: EO:0007135 ! Magnaporthe spp. [Term] id: EO:0007364 name: Rhizoctonia oryzae def: "The treatment involving exposure of plant to the pathogen Rhizoctonia oryzae. It is a causal agent for rice Sheath Spot disease such as Bordered Sheath Spot Disease, Red Sclerotial Disease and Rhizoctonia Sheath Spot Disease." [GR:ivy, NCBI_taxid:63190] synonym: "Rhizoctonia zeae" RELATED [] synonym: "Waitea circinata" RELATED [] is_a: EO:0007073 ! Basidiomycota treatment [Term] id: EO:0007365 name: rice dwarf virus def: "The treatment involving exposure of plant to the pathogen rice dwarf virus. It is a causal agent for rice dwarf phytoreo virus disease." [GR:ivy, NCBI_taxid:10991] synonym: "RDV" RELATED [] synonym: "rice dwarf phytoreovirus" RELATED [] synonym: "rice dwarf phytoreovirus RDV" RELATED [] xref: NCBI_taxid:10991 is_a: EO:0007110 ! dsRNA virus [Term] id: EO:0007366 name: rice black streak dwarf virus def: "The treatment involving exposure of plant to the pathogen rice black streak dwarf virus. It is a causal agent for rice blast steak dwarf disease." [GR:ivy, NCBI_taxid:10990] synonym: "RBSDV" RELATED [] synonym: "Rice black streak virus" RELATED [] synonym: "rice black-streaked dwarf fijivirus" RELATED [] synonym: "Rice black-streaked dwarf virus" RELATED [] synonym: "rice black-streaked dwarf virus RBSDV" RELATED [] is_a: EO:0007110 ! dsRNA virus [Term] id: EO:0007367 name: Aphelenchoides besseyi def: "The treatment involving exposure of plant to the pest Aphelenchoides besseyi. It is a causal agent for rice white tip nematode disease." [GR:pj] synonym: "rice white-tip nematode" RELATED [] is_a: EO:0007337 ! Nematoda [Term] id: EO:0007368 name: warm/hot water temperature regimen def: "The treatment involving an exposure to above optimal water temperature, which may depend on the study type or the regional environment." [GR:pj] is_a: EO:0007160 ! water temperature regimen is_a: EO:0007173 ! warm/hot temperature regimen [Term] id: EO:0007369 name: Meloidogyne salasi def: "The treatment involving exposure of plant to the pest Meloidogyne salasi. It is a causal agent for rice root knot nematode disease." [GR:pj] is_a: EO:0007127 ! Meloidogyne spp. [Term] id: EO:0007370 name: Meloidogyne oryzae def: "The treatment involving exposure of plant to the pest Meloidogyne oryzae. It is a causal agent for rice root knot nematode disease." [GR:pj] is_a: EO:0007127 ! Meloidogyne spp. [Term] id: EO:0007371 name: Meloidogyne javanica def: "The treatment involving exposure of plant to the pest Meloidogyne oryzae. It is a causal agent for rice root knot nematode disease." [GR:pj, NCBI_taxid:6303] synonym: "root-knot nematode" RELATED [] is_a: EO:0007127 ! Meloidogyne spp. [Term] id: EO:0007372 name: Meloidogyne incognita def: "The treatment involving exposure of plant to the pest Meloidogyne oryzae. It is a causal agent for rice root knot nematode disease." [GR:pj, NCBI_taxid:6306] synonym: "southern root-knot nematode" RELATED [] is_a: EO:0007127 ! Meloidogyne spp. [Term] id: EO:0007373 name: mechanical damage synonym: "wound" RELATED [] synonym: "wound treatment" RELATED [] synonym: "wounding" RELATED [] is_a: EO:0007316 ! physical plant treatment [Term] id: EO:0007374 name: Cylindrocladium scoparium def: "The treatment involving exposure of plant to the pathogen Cylindrocladium scoparium. It is a causal agent for rice Sheath Net Blotch Disease." [GR:ivy, NCBI_taxid:40624] synonym: "Calonectria morganii" RELATED [] is_a: EO:0007107 ! Ascomycota treatment [Term] id: EO:0007375 name: Meloidogyne graminicola def: "The treatment involving exposure of plant to the pest Meloidogyne oryzae. It is a causal agent for rice root knot nematode disease." [GR:pj, NCBI_taxid:189291] is_a: EO:0007127 ! Meloidogyne spp. [Term] id: EO:0007376 name: Pyrenochaeta oryzae def: "The treatment involving exposure of plant to the pathogen Pyrenochaeta oryzae. It is a causal agent for rice Sheath Blotch Disease." [GR:ivy] is_a: EO:0007107 ! Ascomycota treatment [Term] id: EO:0007377 name: Athelia rolfsii def: "The treatment involving exposure of plant to the pathogen Athelia rolfsii. It is a causal agent for rice Seedling Blight (Fungal) disease." [GR:ivy, NCBI_taxid:109385] synonym: "Sclerotium rolfsii" RELATED [] is_a: EO:0007073 ! Basidiomycota treatment [Term] id: EO:0007378 name: Sarocladium oryzae treatment def: "A plant fungal treatment (EO:0007233) involving exposure of plant to the pathogen Sarocladium oryzae. It is a causal agent for rice Seedling Blight (Fungal) disease and/or Sheath Rot disease." [GR:ivy] synonym: "Acrocylindrium oryzae" RELATED [] xref: NCBI_Taxon_ID:284135 is_a: EO:0007233 ! fungal plant treatment [Term] id: EO:0007379 name: Thanatephorus cucumeris def: "The treatment involving exposure of plant to the pathogen Thanatephorus cucumeris." [GR:ivy, NCBI_taxid:107832] comment: It is a causal agent for rice Sheath Blight diseases such as Brown-bordered Leaf and Sheath Spot disease and/or Oriental Leaf and Sheath Blight disease. synonym: "black scurf of potato" RELATED [] synonym: "Rhizoctonia praticola" RELATED [] synonym: "Rhizoctonia solani" RELATED [] synonym: "Thanatephorus praticola" RELATED [] is_a: EO:0007073 ! Basidiomycota treatment [Term] id: EO:0007380 name: cytoplasmic genetic background def: "OBSOLETE. " [GR:pj] is_obsolete: true [Term] id: EO:0007381 name: nuclear genetic background def: "OBSOLETE. " [GR:pj] is_obsolete: true [Term] id: EO:0007382 name: wind environment def: "The treatment involving an exposure to wind, which may depend on regional environment." [GR:pj] is_a: EO:0007064 ! ecological environment is_a: EO:0007316 ! physical plant treatment [Term] id: EO:0007383 name: watering regimen def: "The treatment involving an exposure to watering frequencies." [GR:pj] is_a: EO:0007198 ! water environment [Term] id: EO:0007384 name: freezing air temperature regimen def: "The treatment involving an exposure to frost or freezing air temperature, which may depend on the study type or the regional environment. This temperature is either below or around 4C." [GR:pj] is_a: EO:0007332 ! cold air temperature regimen [Term] id: EO:0007385 name: irrigated land region def: "The treatment to plants or the populations grown in the regions where the land is leveled, may have bunded fields with water control, shallow. For rice flooded with anaoerobic soil during crop growth." [IRIS:SES] is_a: EO:0007064 ! ecological environment [Term] id: EO:0007386 name: Gerlachia oryzae def: "The treatment involving exposure of plant to the pathogen Gerlachia oryzae. It is a causal agent for a form of rice Seedling Blight (Fungal) disease." [GR:ivy, NCBI_taxid:87749] synonym: "Monographella albescens" RELATED [] synonym: "rice leaf scald" RELATED [] is_a: EO:0007107 ! Ascomycota treatment [Term] id: EO:0007387 name: manganese nutrient regimen def: "The treatment involving exposure of plant to micronutrient manganese as supplement to study various types of responses." [GR:pj] is_a: EO:0007239 ! micronutrient regimen [Term] id: EO:0007388 name: Alternaria padwickii def: "The treatment involving exposure of plant to the pathogen Alternaria padwickii. It is a causal agent for rice seedling blight (fungal) disease and/or stackburn disease also called as Alternaria Leaf Spot Disease." [GR:ivy] synonym: "Trichoconis padwickii" RELATED [] is_a: EO:0007214 ! Alternaria spp. [Term] id: EO:0007389 name: Gibberella zeae def: "The treatment involving exposure of plant to the pathogen Gibberella zeae. It is a causal agent for rice Scab disease." [GR:ivy, NCBI_taxid:5518] synonym: "Fusarium graminearum" RELATED [] is_a: EO:0007118 ! Gibberella spp. [Term] id: EO:0007391 name: lowland region alt_id: EO:0007390 def: "The treatment involving the plant or the populations grown in regions where the land level is slightly steep, noncontinuous flooding of variable depth and duration. Alternatingconditions of aerobic to anaerobic soil." [IRIS:SES] synonym: "rainfed lowland region" RELATED [] is_a: EO:0007064 ! ecological environment [Term] id: EO:0007392 name: upland region def: "The treatment involving the plant or the populations grown in regions where the land level is steep, rarely flodded and has aerobic soil." [IRIS:SES] is_a: EO:0007064 ! ecological environment [Term] id: EO:0007393 name: sub-sahara region def: "OBSOLETE. " [GR:pj] is_obsolete: true [Term] id: EO:0007394 name: desert like region def: "The treatment involving an exposure to the conditions found in a type of biome characterized by low moisture levels and infrequent and unpredictable precipitation of rainfall." [GR:pj] is_a: EO:0007064 ! ecological environment [Term] id: EO:0007395 name: river delta region is_a: EO:0007396 ! flood prone region [Term] id: EO:0007396 name: flood prone region def: "A treatment in terms of plant's exposure to the regional conditions found in the vicinity of the water bodies like, sea, river, lake etc. Growth conditions may include aerobic to anaerobic soil, salinity or toxicity in tidal areas. Treatment may include standing or flash flooding." [GR:pj] synonym: "deep water" RELATED [] synonym: "flooding" RELATED [] is_a: EO:0007064 ! ecological environment [Term] id: EO:0007397 name: phosphorus nutrient regimen def: "The treatment involving exposure of plant to macronutrient phosphorus as supplement to study various types of responses." [GR:pj] is_a: EO:0007045 ! primary plant macronutrient regimen [Term] id: EO:0007398 name: sub-tropical region def: "The treatment involving the plant or the populations grown in regions that are adjacent to the tropics, usually roughly defined as the ranges 25-40 N and 25-40 S latitude. These areas typically have hot tropical summers, but non-tropical winters." [GR:pj] is_a: EO:0007064 ! ecological environment [Term] id: EO:0007399 name: freezing water temperature regimen def: "The treatment involving an exposure to frost or freezing water temperature, which may depend on the study type or the regional environment. This temperature is either below or around 4C." [GR:pj] is_a: EO:0007338 ! cold water temperature regimen [Term] id: EO:0007400 name: arid region def: "The treatment involving the plant or the populations grown in regions where the land is excessively dry and receives insufficient rainfall to support agriculture." [GR:pj] is_a: EO:0007394 ! desert like region [Term] id: EO:0007401 name: semiarid region def: "The treatment involving the plant or the populations grown in regions where the total annual rainfall received in the range of 25-50cm (10-20 inches)." [GR:pj] is_a: EO:0007064 ! ecological environment [Term] id: EO:0007402 name: fungal elicitor treatment def: "A chemical treatment (EO:0007189) that involves the use of a fungal elicitor to study various types of plant responses." [TO:moorel] xref: OBO_SF2_EO:71 is_a: EO:0007189 ! chemical treatment [Term] id: EO:0007403 name: unknown treatment def: "A plant treatment (EO:0001001) where there is a lack of information describing the experimental conditions." [PO:cooperl] comment: In some cases, only the study type ((EO:0007231) is known, without any additional information about the treatments. xref: OBO_SF2_EO:83 is_a: EO:0001001 ! plant treatment [Term] id: EO:0007404 name: drought environment is_a: EO:0007198 ! water environment [Term] id: EO:0007405 name: Hoagland solution is_a: EO:0007067 ! hydroponic plant culture media [Term] id: EO:0007406 name: nitrate regimen is_a: EO:0007102 ! nitrogen fertilizer regimen [Term] id: EO:0007407 name: methyl jasmonate treatment def: "An organic chemical treatment (EO:0001003) involving the application of methyl jasmonate (MeJa; CHEBI:15929)." [CHEBI:15929, PO:Cooperl] xref: OBO_SF2_EO:62 is_a: EO:0001003 ! organic chemical treatment [Term] id: EO:0007408 name: 5-methyltryptophan treatment def: "An organic chemical treatment (EO:0001003) involving the application of the tryptophan (Trp) analog 5-methyltryptophan (5MT; CHEBI: 52446)." [CHEBI:52446, PO:cooperl] xref: OBO_SF2_EO:61 is_a: EO:0001003 ! organic chemical treatment [Term] id: EO:0007409 name: brassinosteroid treatment def: "A growth hormone treatment (EO:0007165) involving the use of brassinosteroid (or its homolog) growth hormone to study various types of responses on its extrinsic and/or intrinsic application." [TO:moorel] xref: OBO_SF2_EO:72 is_a: EO:0007165 ! growth hormone treatment [Term] id: EO:0007410 name: cerebroside elicitor treatment def: "A fungal elicitor treatment (EO:0007402) that involves the use of a cerebroside elicitor to study various types of plant responses." [TO:moorel] xref: OBO_SF2_EO:71 is_a: EO:0007402 ! fungal elicitor treatment [Term] id: EO:0007411 name: Pseudomonas fluorescens def: "A Pseudomonas plant treatment (EO:0007144) involving the exposure to bacteria of the Pseudomonas fluorescens group." [NCBI_taxid:274, PO:cooperl] synonym: "Bacillus fluorescens" RELATED [] synonym: "Bacillus fluorescens liquefaciens" RELATED [] synonym: "Bacterium fluorescen" RELATED [] synonym: "Liquidomonas fluorescens" RELATED [] xref: NCBI_taxid:294 is_a: EO:0007144 ! Pseudomonas plant treatment [Term] id: EO:0007412 name: zinc sulphate regimen def: "The treatment involving exposure of plant to micronutrient zinc by adding ZnSO4 as supplement to study various types of responses." [GR:pj] synonym: "ZnSO4" RELATED [] is_a: EO:0007309 ! zinc nutrient regimen [Term] id: EO:0007413 name: manganese sulfate regimen def: "The treatment involving exposure of plant to micronutrient manganese by adding MnSO4 supplement to study various types of responses." [GR:pj] synonym: "MnSO4" RELATED [] is_a: EO:0007387 ! manganese nutrient regimen [Term] id: EO:0007414 name: peroxide treatment def: "A chemical treatment (EO:0007189) involving exposure of plant to a peroxide to study various types of oxidative stress responses." [GR:pj] xref: OBO_SF2_EO:73 is_a: EO:0007189 ! chemical treatment [Term] id: EO:0007415 name: hydrogen peroxide treatment def: "A peroxide treatment (EO:0007414) involving exposure of plant to H2O2 to study various types of oxidative stress responses." [GR:pj] xref: OBO_SF2_EO:73 is_a: EO:0007414 ! peroxide treatment [Term] id: EO:0007503 name: 1,2-dibromoethane def: "The treatment involving use of 1,2-dibromoethane for mutagenesis process." [CAS:[106-93-4\], GR:pj] synonym: "DBE" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007504 name: 1,2-dichloroethane def: "The treatment involving use of 1,2-dichloroethane for mutagenesis process." [CAS:[107-06-2\], GR:pj] synonym: "DCE" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007505 name: 1,2:5,6-dibenzanthracene def: "The treatment involving use of 1,2:5,6-dibenzanthracene for mutagenesis process." [CAS:[53-70-3\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007506 name: 1,4-dimethanesulfonoxy-1:4-dimethylbutane def: "The treatment involving use of 1,4-dimethanesulfonoxy-1:4-dimethylbutane for mutagenesis process." [CAS:[2514-83-2\], GR:pj] synonym: "CB2348" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007507 name: 1,4-dimethanesulfonoxybut-2-yne def: "The treatment involving use of 1,4-dimethanesulfonoxybut-2-yne for mutagenesis process." [CAS:[2917-96-6\], GR:pj] synonym: "CB2058" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007508 name: 1,4-dimethanesulfonoxybutane def: "The treatment involving use of 1,4-dimethanesulfonoxybutane for mutagenesis process." [CAS:[55-98-1\], GR:pj] synonym: "busulfan" RELATED [] synonym: "CB2041" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007509 name: 1,6-dimethylsulfonoxy D-mannitol def: "The treatment involving use of 1,6-dimethylsulfonoxy D-mannitol for mutagenesis process." [CAS:[1187-00-4\], GR:pj] synonym: "CB2511" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007510 name: 1,6-dimethylsulfonoxy L-mannitol def: "The treatment involving use of 1,6-dimethylsulfonoxy L-mannitol for mutagenesis process." [CAS:[2514-83-2\], GR:pj] synonym: "CB2628" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007511 name: 1-amino-2-naphthol-4-sulfonic acid def: "The treatment involving use of 1-amino-2-naphthol-4-sulfonic acid for mutagenesis process." [CAS:[116-63-2\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007512 name: 1-bromo-2-chloroethane def: "The treatment involving use of 1-bromo-2-chloroethane for mutagenesis process." [CAS:[107-04-0\], GR:pj] synonym: "BCE" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007513 name: 1-diethylaminoethylethylamino-4-methyl-thioxanthenone def: "The treatment involving use of 1-diethylaminoethylethylamino-4-methyl-thioxanthenone for mutagenesis process." [CAS:[479-50-5\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007514 name: 2,5,-bisethylene-imine-1,4-benzoquinone def: "The treatment involving use of 2,5,-bisethylene-imine-1,4-benzoquinone for mutagenesis process." [CAS:[526-62-5\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007515 name: 2-chloroethyl methanesulfonate def: "The treatment involving use of 2-chloroethyl methanesulfonate for mutagenesis process." [CAS:[3570-58-9\], GR:pj] synonym: "CB1506" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007516 name: 2-fluoroethyl methanesulfonate def: "The treatment involving use of 2-fluoroethyl methanesulfonate for mutagenesis process." [CAS:[461-31-4\], GR:pj] synonym: "CB1522" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007517 name: 2-methoxyethanol def: "The treatment involving use of 2-methoxyethanol for mutagenesis process." [CAS:[109-86-4\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007518 name: 5-bromouracil def: "The treatment involving use of 5-bromouracil for mutagenesis process." [CAS:[51-20-7\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007519 name: 5-bromouridine def: "The treatment involving use of 5-bromouridine for mutagenesis process." [CAS:[957-75-5\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007520 name: 7-bromomethyl 12 methyl benz or agr/anthracine def: "The treatment involving use of 7-bromomethyl 12 methyl benz or agr/anthracine for mutagenesis process." [CAS:[16238-56-5\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007521 name: actinomycin D treatment def: "An antibiotic treatment (EO:0007041) involving use of actinomycin D for mutagenesis process." [CAS:[50-76-0\], GR:pj, TO:moorel] xref: OBO_SF2_EO:70 is_a: EO:0007041 ! antibiotic treatment is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007522 name: aminopterin def: "The treatment involving use of aminopterin for mutagenesis process." [CAS:[54-62-6\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007523 name: benzo (or agr)pyrene def: "The treatment involving use of benzo (or agr)pyrene for mutagenesis process." [CAS:[50-32-8\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007524 name: caffeine def: "The treatment involving use of caffeine for mutagenesis process." [CAS:[58-08-2\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007525 name: cisplatin def: "The treatment involving use of cisplatin for mutagenesis process." [CAS:[15663-27-1\], GR:pj] synonym: "cis-dichlorodiammineplatinum(II)" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007526 name: colchicine def: "The treatment involving use of colchicine for mutagenesis process." [CAS:[64-86-8\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007527 name: cupric sulfate def: "The treatment involving use of cupric sulfate for mutagenesis process." [CAS:[7758-98-7\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007528 name: diepoxybutane def: "The treatment involving use of diepoxybutane for mutagenesis process." [CAS:[1464-53-5\], GR:pj] synonym: "DEB" RELATED [] synonym: "erythritol anhydride" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007529 name: diepoxyoctane def: "The treatment involving use of diepoxyoctane for mutagenesis process." [CAS:[2426-07-5\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007530 name: diethyl sulfate def: "The treatment involving use of diethyl sulfate for mutagenesis process." [CAS:[64-67-5\], GR:pj] synonym: "DES" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007531 name: dimethyl sulfoxide def: "The treatment involving use of dimthyl sulfate for mutagenesis process." [CAS:[67-68-5\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007532 name: DNA def: "The treatment involving use of DNA fragment insertion or deletion as part of mutagenesis." [CAS:[9007-49-2\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007533 name: ethyl ether def: "The treatment involving use of ethyl ether for mutagenesis process." [CAS:[60-29-7\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007534 name: ethyl methanesulfonate def: "The treatment involving use of EMS as a mutagen by damaging DNA and is used experimentally for that effect." [CAS:[62-50-0\], GR:pj] synonym: "CB1528" RELATED [] synonym: "EMS" RELATED [] synonym: "Methanesulfonic acid ethyl ester" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007535 name: ethyl nitrosourea def: "The treatment involving use of ethyl nitrosourea for mutagenesis process." [CAS:[759-73-9\], GR:pj] synonym: "ENU" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007536 name: ethylene oxide def: "The treatment involving use of ethylene oxide for mutagenesis process." [GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007537 name: ethylenimine def: "The treatment involving use of ethylenimine for mutagenesis process." [CAS:[151-56-4\], GR:pj] synonym: "EI" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007538 name: fagaronine def: "The treatment involving use of fagaronine for mutagenesis process." [GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007539 name: formaldehyde def: "The treatment involving use of formaldehyde for mutagenesis process." [CAS:[50-00-0\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007540 name: boric acid def: "The treatment involving use of boric acid for mutagenesis process." [GR:pj] synonym: "H3BO3" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007541 name: hesperidine def: "The treatment involving use of hesperidine for mutagenesis process." [CAS:[520-26-3\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007542 name: hexamethylmelamine def: "The treatment involving use of hexamethylmelamine for mutagenesis process." [CAS:[645-05-6\], GR:pj] synonym: "altretamine" RELATED [] synonym: "HMM" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007543 name: hexamethylphosphoramide def: "The treatment involving use of hexamethylphosphoramide for mutagenesis process." [CAS:[680-31-9\], GR:pj] synonym: "HMPA" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007544 name: hycanthon methanesulfonate def: "The treatment involving use of hycanthon methanesulfonate for mutagenesis process." [CAS:[23255-93-8\], GR:pj] synonym: "HMS" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007545 name: ICR 100 def: "The treatment involving use of ICR 100 for mutagenesis process." [CAS:[4213-45-0\], GR:pj] synonym: "2-methoxy-6-[3-(ethyl-2-chloroethyl)aminopropylamino]acridine" RELATED [] synonym: "quinacrine mustard" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007546 name: ICR 170 def: "The treatment involving use of ICR 170 for mutagenesis process." [CAS:[146-59-8\], GR:pj] synonym: "2-methoxy-6-dichloro-9-(3-ethyl-2-chloroethyl-aminopropylamino)acridine-dihydrochloride" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007547 name: iodine def: "The treatment involving use of iodine for mutagenesis process." [CAS:[7553-56-2\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007548 name: Janus green B def: "The treatment involving use of Janus green B for mutagenesis process." [CAS:[2869-83-2\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007549 name: methoxy diethylnitrosamine def: "The treatment involving use of methoxy diethylnitrosamine for mutagenesis process." [GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007550 name: methyl methanesulfonate def: "The treatment involving use of methyl methanesulfonate for mutagenesis process." [CAS:[66-27-3\], GR:pj] synonym: "CB1540" RELATED [] synonym: "MMS" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007551 name: mitomycin C treatment def: "An antibiotic treatment (EO:0007551) involving use of mitomycin C for mutagenesis process." [CAS:[50-07-7\], GR:pj, TO:moorel] xref: OBO_SF2_EO:70 is_a: EO:0007041 ! antibiotic treatment is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007552 name: mustard gas def: "The treatment involving use of mustard gas for mutagenesis process." [CAS:[505-60-2\], GR:pj] synonym: "1,1'-thiobis[2-chloroethane" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007553 name: N-methyl-N'-nitro-N-nitrosoguanidine def: "The treatment involving use of N-methyl-N'-nitro-N-nitrosoguanidine for mutagenesis process." [CAS:[70-25-7\], GR:pj] synonym: "MNNG" RELATED [] synonym: "NNG" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007554 name: N-nitrosodimethylamine def: "The treatment involving use of N-nitrosodimethylamine for mutagenesis process." [CAS:[62-75-9\], GR:pj] synonym: "DMN" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007555 name: natural gas def: "The treatment involving use of natural gas for mutagenesis process." [GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007556 name: nitrogen mustard def: "The treatment involving use of nitrogen mustard for mutagenesis process." [CAS:[51-75-2\], GR:pj] synonym: "2-chloro-N-(2-chloroethyl)-N-methylethanamine" RELATED [] synonym: "CB1414" RELATED [] synonym: "HN2" RELATED [] synonym: "mechlorethamine" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007557 name: nitrosomethyl urea def: "The treatment involving use of nitrosomethyl urea for mutagenesis process." [CAS:[684-93-5\], GR:pj] synonym: "MNU" RELATED [] synonym: "N-methyl-N-nitrosourea" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007558 name: p-N,N-di(2-chloroethyl)aminophenylvaleric acid def: "The treatment involving use of p-N,N-di(2-chloroethyl)aminophenylvaleric acid for mutagenesis process." [CAS:[64508-90-3\], GR:pj] synonym: "CB1356" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007559 name: p-N,N-di-(2-chloroethyl)amino-D-phenylalanine def: "The treatment involving use of p-N,N-di-(2-chloroethyl)amino-D-phenylalanine for mutagenesis process." [CAS:[13045-94-8\], GR:pj] synonym: "CB3026" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007560 name: p-N,N-di-(2-chloroethyl)amino-DL-phenylalanine def: "The treatment involving use of p-N,N-di-(2-chloroethyl)amino-DL-phenylalanine for mutagenesis process." [CAS:[148-82-3\], GR:pj] synonym: "CB3007" RELATED [] synonym: "melphalan" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007561 name: p-N,N-di-(2-chloroethyl)amino-L-phenylalanine def: "The treatment involving use of p-N,N-di-(2-chloroethyl)amino-L-phenylalanine for mutagenesis process." [GR:pj] synonym: "CB3025" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007562 name: p-N,N-di-(2-chloroethyl)aminophenylbutyric acid def: "The treatment involving use of p-N,N-di-(2-chloroethyl)aminophenylbutyric acid for mutagenesis process." [CAS:[305-03-3\], GR:pj] synonym: "CB1348" RELATED [] synonym: "chlorambucil" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007563 name: p-N,N-di-(2-chloroethyl)aminophenylethylamine def: "The treatment involving use of p-N,N-di-(2-chloroethyl)aminophenylethylamine for mutagenesis process." [CAS:[58880-18-5\], GR:pj] synonym: "CB3034" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007564 name: p-p'-N,N-di(2-chloroethyl)aminophenoxyphenylalanine def: "The treatment involving use of p-p'-N,N-di(2-chloroethyl)aminophenoxyphenylalanine for mutagenesis process." [CAS:[857-95-4\], GR:pj] synonym: "CB3051" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007565 name: quinhydrone def: "The treatment involving use of quinhydrone for mutagenesis process." [CAS:[106-34-3\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007566 name: S-2-chloroethylcysteine def: "The treatment involving use of S-2-chloroethylcysteine for mutagenesis process." [CAS:[28361-96-8\], GR:pj] synonym: "CB1592" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007567 name: sodium bisulfite def: "The treatment involving use of sodium bisulfite for mutagenesis process." [CAS:[7631-90-5\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007568 name: sodium fluoride def: "The treatment involving use of sodium fluoride for mutagenesis process." [CAS:[7681-49-4\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007569 name: styryl quinoline def: "The treatment involving use of styryl quinoline for mutagenesis process." [GR:pj] synonym: "CB3086" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007570 name: sulfur mustard def: "The treatment involving use of sulfur mustard for mutagenesis process." [CAS:[505-60-2\], GR:pj] synonym: "CB1735" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007571 name: triaziquone def: "The treatment involving use of triaziquone for mutagenesis process." [CAS:[68-76-8\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007572 name: triethylenemelamine def: "The treatment involving use of triethylenemelamine for mutagenesis process." [CAS:[51-18-3\], GR:pj] synonym: "CB1246" RELATED [] synonym: "TEM" RELATED [] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007573 name: urethane def: "The treatment involving use of urethane for mutagenesis process." [CAS:[51-79-6\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007574 name: vinyl carbamate def: "The treatment involving use of vinyl carbamate for mutagenesis process." [CAS:[15805-73-9\], GR:pj] is_a: EO:0007149 ! chemical mutagen treatment [Term] id: EO:0007610 name: 3-H synonym: "tritium" RELATED [] is_a: EO:0007154 ! radiation quality treatment [Term] id: EO:0007611 name: 3-H-deoxycytidine is_a: EO:0007154 ! radiation quality treatment [Term] id: EO:0007612 name: 3-H-thymidine is_a: EO:0007154 ! radiation quality treatment [Term] id: EO:0007613 name: 32-P is_a: EO:0007154 ! radiation quality treatment [Term] id: EO:0007614 name: agr ray is_a: EO:0007154 ! radiation quality treatment [Term] id: EO:0007615 name: Bevatron irradiation is_a: EO:0007154 ! radiation quality treatment [Term] id: EO:0007616 name: deuteron irradiation is_a: EO:0007154 ! radiation quality treatment [Term] id: EO:0007617 name: ggr ray is_a: EO:0007154 ! radiation quality treatment [Term] id: EO:0007618 name: 137-Cs or ggr ray is_a: EO:0007617 ! ggr ray [Term] id: EO:0007619 name: 226-Ra or agr ray synonym: "radium" RELATED [] is_a: EO:0007617 ! ggr ray [Term] id: EO:0007620 name: 60-Co or ggr ray is_a: EO:0007617 ! ggr ray [Term] id: EO:0007621 name: magnetic field is_a: EO:0007154 ! radiation quality treatment [Term] id: EO:0007622 name: neutrons is_a: EO:0007154 ! radiation quality treatment [Term] id: EO:0007623 name: 252-Cf fission neutrons is_a: EO:0007622 ! neutrons [Term] id: EO:0007624 name: radio wave is_a: EO:0007154 ! radiation quality treatment [Term] id: EO:0007625 name: stratosphere exposure is_a: EO:0007154 ! radiation quality treatment [Term] id: EO:0007626 name: supersonic-treatment is_a: EO:0007154 ! radiation quality treatment [Term] id: EO:0007628 name: X-ray def: "The treatment using X-ray either exclusively or as part of a supplemental electromagnetic radiation in the wavelength range of 5pm-10nm." [GR:pj] is_a: EO:0007154 ! radiation quality treatment [Term] id: EO:0007629 name: hydrogen regimen def: "The treatment involving exposure of plant to molecular or ionic forms of hydrogen to study various types of responses." [GR:pj] is_a: EO:0007043 ! non-mineral nutrient regimen [Term] id: EO:0007630 name: Sclerospora spp. def: "The treatment involving exposure of plant to the pathogenic Sclerospora sp." [GR:pj] is_a: EO:0007106 ! Stramenopiles [Term] id: EO:0007631 name: Sclerospora graminicola def: "The treatment involving exposure of plant to the pathogen Sclerophthora graminicola. It is a causal agent for downy mildew disease." [GR:pj, NCBI_taxid:162130] is_a: EO:0007630 ! Sclerospora spp. [Term] id: EO:0007632 name: insecticide treatment def: "A pesticide treatment (EO:0007167) involving the application of an insecticide; a chemical entity or mixture of chemical entities." [GR:pj] xref: CHEBI:24852 xref: OBO_SF2_EO:74 is_a: EO:0007167 ! pesticide treatment [Term] id: EO:0007633 name: imidazolinone treatment def: "An herbicide treatment (EO:0007183) involving the use of an imidazolinone herbicide." [TO:moorel, web:http\://corn.agronomy.wisc.edu/AAdvice/1994/A001.html] comment: This type of herbicides are taken up by plant root and leaf tissue and transported to the meristems via both phloem and xylem. The herbicide stops the activity of the enzyme, acetolactate synthase (ALS), which is involved in branch chain amino acid (valine, leucine and isoleucine) synthesis. xref: OBO_SF2_EO:75 is_a: EO:0007183 ! herbicide treatment [Term] id: EO:0007634 name: Spodoptera litura def: "The treatment involving exposure of plant to the pest commonly calles as cutworm." [GR:pj] is_a: EO:0007115 ! Spodoptera spp. [Typedef] id: part_of name: part of