format-version: 1.2
date: 17:05:2010 23:35autogenerated-by: owl2obo.xsl (http://rnao.googlecode.com/svn/trunk/owl2obo.xsl)
[Term]
id: CHEBI:15901
name: 5,6-dihydrouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: CHEBI:16020
name: 1-methyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: CHEBI:16289
name: beta-D-galactosyl group
is_a: CHEBI:24433
[Term]
id: CHEBI:17368
name: hypoxanthine nucleobase
is_a: RNAO:0000477
relationship: has_functional_parent RNAO:0000027
[Term]
id: CHEBI:17596
name: inosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: CHEBI:17802
name: pseudouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: CHEBI:19062
name: 1-methylguanosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: CHEBI:19065
name: 1-methylinosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: CHEBI:19068
name: 1-methylpseudouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: CHEBI:19227
name: 2prime-O-methyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: CHEBI:19228
name: 2prime-O-methylcytidine residue
is_a: RNAO:0000533
relationship: has_functional_parent RNAO:0000035
[Term]
id: CHEBI:19229
name: 2prime-O-methylguanosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: CHEBI:19231
name: 2prime-O-methylpseudouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: CHEBI:19289
name: N2,N2-dimethylguanosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: CHEBI:19688
name: 2-methyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: CHEBI:19702
name: N2-methylguanosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: CHEBI:19780
name: 2-thiocytidine residue
is_a: RNAO:0000533
relationship: has_functional_parent RNAO:0000035
[Term]
id: CHEBI:19928
name: 3-(3-amino-3-carboxypropyl)uridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: CHEBI:20129
name: 3-methylcytidine residue
is_a: RNAO:0000533
relationship: has_functional_parent RNAO:0000035
[Term]
id: CHEBI:20305
name: N4-acetylcytidine residue
is_a: RNAO:0000533
relationship: has_functional_parent RNAO:0000035
[Term]
id: CHEBI:20480
name: 4-thiouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: CHEBI:20530
name: 5-(carboxyhydroxymethyl)uridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: CHEBI:20555
name: 5-carboxymethylaminomethyl-2-thiouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: CHEBI:20597
name: 5-methoxycarbonylmethyl-2-thiouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: CHEBI:20598
name: 5-methoxycarbonylmethyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: CHEBI:20601
name: 5-methoxyuridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: CHEBI:20602
name: 5-methyl-2-thiouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: CHEBI:20607
name: 5-methylcytidine residue
is_a: RNAO:0000533
relationship: has_functional_parent RNAO:0000035
[Term]
id: CHEBI:20794
name: 7-methylguanosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: CHEBI:21891
name: N6-methyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: CHEBI:22453
name: glutamyl group
is_a: CHEBI:24433
[Term]
id: CHEBI:22832
name: 3-amino-3-carboxypropyl group
is_a: CHEBI:24433
[Term]
id: CHEBI:23004
name: carbamoyl group
is_a: CHEBI:24433
[Term]
id: CHEBI:23774
name: dihydrouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: CHEBI:24433
name: group
is_a: RNAO:0000158
[Term]
id: CHEBI:24712
name: hydroxymethyl group
is_a: CHEBI:24433
[Term]
id: CHEBI:25170
name: mannosyl group
is_a: CHEBI:24433
[Term]
id: CHEBI:25805
name: oxygen atom
is_a: CHEBI:33250
[Term]
id: CHEBI:25935
name: hydroperoxyl
is_a: CHEBI:24433
[Term]
id: CHEBI:26248
name: prenyl group
is_a: CHEBI:24433
[Term]
id: CHEBI:26565
name: ribosyl group
is_a: CHEBI:24433
[Term]
id: CHEBI:26861
name: tauryl group
is_a: CHEBI:24433
[Term]
id: CHEBI:27240
name: uridine 5-oxyacetic acid residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: CHEBI:27594
name: carbon atom
is_a: CHEBI:33250
[Term]
id: CHEBI:28284
name: N6,N6-dimethyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: CHEBI:28659
name: phosphorous atom
is_a: CHEBI:33250
[Term]
id: CHEBI:29235
name: hydrogen atom
is_a: CHEBI:33250
[Term]
id: CHEBI:29351
name: nitrogen atom
is_a: CHEBI:33250
[Term]
id: CHEBI:32875
name: methyl group
is_a: CHEBI:24433
[Term]
id: CHEBI:32958
name: phosphate group
is_a: CHEBI:24433
[Term]
id: CHEBI:33250
name: atom
is_a: snap#MaterialEntity
[Term]
id: CHEBI:37900
name: threonyl group
is_a: CHEBI:24433
[Term]
id: CHEBI:37903
name: lysyl group
is_a: CHEBI:24433
[Term]
id: CHEBI:40574
name: acetyl group
is_a: CHEBI:24433
[Term]
id: CHEBI:41402
name: carboxymethyl group
is_a: CHEBI:24433
[Term]
id: CHEBI:42485
name: formyl group
is_a: CHEBI:24433
[Term]
id: CHEBI:43176
name: hydroxy group
is_a: CHEBI:24433
[Term]
id: CHEBI:44209
name: methylamino group
is_a: CHEBI:24433
[Term]
id: CHEBI:44520
name: methoxy group
is_a: CHEBI:24433
[Term]
id: CHEBI:46629
name: oxo group
is_a: CHEBI:24433
[Term]
id: CHEBI:46740
name: glycyl group
is_a: CHEBI:24433
[Term]
id: CHEBI:46882
name: amino group
is_a: CHEBI:24433
[Term]
id: CHEBI:46883
name: carboxy group
is_a: CHEBI:24433
[Term]
id: CHEBI:48819
name: cyano group
is_a: CHEBI:24433
[Term]
id: RNAO:0000000
name: ribonucleic acid
is_a: RNAO:0000201
[Term]
id: RNAO:0000001
name: base pair
def: "A base pair consists of a pair of nucleotide residues that interact by nucleoside edge to nucleoside edge hydrogen bonds." [RNAO:ROC]
is_a: snap#MaterialEntity
[Term]
id: RNAO:0000002
name: deoxyribose ring
def: "A ribose ring that does not have a hydroxy group at the 2prime position." [RNAO:ROC]
is_a: RNAO:0000147
[Term]
id: RNAO:0000003
name: family 1 base pair
def: "A family_1_base_pair is an RNAO_base_pair in which the two RNA nucleotides interact by edge-to-edge hydrogen-bonding between the Watson-Crick edges of each base and in which the glycosidic bonds of the two nucleotides are oriented \"cis\" relative to each other." [RNAO:ROC]
is_a: RNAO:0000116
[Term]
id: RNAO:0000004
name: family 2 base pair
def: "A family_2_base_pair is an RNAO_base_pair in which the two RNA nucleotides interact by edge-to-edge hydrogen-bonding between the Watson-Crick edges of each base and in which the glycosidic bonds of the two nucleotides are oriented \"trans\" relative to each other." [RNAO:ROC]
is_a: RNAO:0000117
[Term]
id: RNAO:0000005
name: family 3 base pair
def: "A family_3_base_pair is an RNAO_base_pair in which two RNA nucleotides interact by edge-to-edge hydrogen-bonding between the Watson-Crick edge of one base and the Hoogsteen edge of the other base and in which the glycosidic bonds of the two nucleotides are oriented \"cis\" relative to each other." [RNAO:ROC]
is_a: RNAO:0000116
[Term]
id: RNAO:0000006
name: family 4 base pair
def: "A family_4_base_pair is an RNAO_base_pair in which two RNA nucleotides interact by edge-to-edge hydrogen-bonding between the Watson-Crick edge of one base and the Hoogsteen edge of the other base and in which the glycosidic bonds of the two nucleotides are oriented \"trans\" relative to each other." [RNAO:ROC]
is_a: RNAO:0000117
[Term]
id: RNAO:0000007
name: family 5 base pair
def: "A family_5_base_pair is an RNAO_base_pair in which two RNA nucleotides interact by edge-to-edge hydrogen-bonding between the Watson-Crick edge of one base and the Sugar edge of the other base and in which the glycosidic bonds of the two nucleotides are oriented \"cis\" relative to each other." [RNAO:ROC]
is_a: RNAO:0000116
[Term]
id: RNAO:0000008
name: family 6 base pair
def: "A family_6_base_pair is an RNAO_base_pair in which two RNA nucleotides interact by edge-to-edge hydrogen-bonding between the Watson-Crick edge of one base and the Sugar edge of the other base and in which the glycosidic bonds of the two nucleotides are oriented \"trans\" relative to each other." [RNAO:ROC]
is_a: RNAO:0000117
[Term]
id: RNAO:0000009
name: family 7 base pair
def: "A family_7_base_pair is an RNAO_base_pair in which two RNA nucleotides interact by edge-to-edge hydrogen-bonding between the Hoogsteen edges of each base and in which the glycosidic bonds of the two nucleotides are oriented \"cis\" relative to each other." [RNAO:ROC]
is_a: RNAO:0000116
[Term]
id: RNAO:0000010
name: family 8 base pair
def: "A family_8_base_pair is an RNAO_base_pair in which two RNA nucleotides interact by edge-to-edge hydrogen-bonding between the Hoogsteen edges of each base and in which the glycosidic bonds of the two nucleotides are oriented \"trans\" relative to each other." [RNAO:ROC]
is_a: RNAO:0000117
[Term]
id: RNAO:0000011
name: family 9 base pair
def: "A family_9_base_pair is an RNAO_base_pair in which two RNA nucleotides interact by edge-to-edge hydrogen-bonding between the Hoogsteen edge of one base and the Sugar edge of the other base and in which the glycosidic bonds of the two nucleotides are oriented \"cis\" relative to each other." [RNAO:ROC]
is_a: RNAO:0000116
[Term]
id: RNAO:0000012
name: family 10 base pair
def: "A family_10_base_pair is an RNAO_base_pair in which two RNA nucleotides interact by edge-to-edge hydrogen-bonding between the Hoogsteen edge of one base and the Sugar edge of the other base and in which the glycosidic bonds of the two nucleotides are oriented \"trans\" relative to each other." [RNAO:ROC]
is_a: RNAO:0000117
[Term]
id: RNAO:0000013
name: family 11 base pair
def: "A family_11_base_pair is an RNAO_base_pair in which two RNA nucleotides interact by edge-to-edge hydrogen-bonding between the Sugar edges of each base and in which the glycosidic bonds of the two nucleotides are oriented \"cis\" relative to each other." [RNAO:ROC]
is_a: RNAO:0000116
[Term]
id: RNAO:0000014
name: family 12 base pair
def: "A family_12_base_pair is an RNAO_base_pair in which two RNA nucleotides interact by edge-to-edge hydrogen-bonding between the Sugar edges of each base and in which the glycosidic bonds of the two nucleotides are oriented \"trans\" relative to each other." [RNAO:ROC]
is_a: RNAO:0000117
[Term]
id: RNAO:0000015
name: RNA suite
is_a: RNAO:0000158
relationship: ro.owl#part_of RNAO:0000000
relationship: ro.owl#has_quality RNAO:0000200
[Term]
id: RNAO:0000016
name: canonical RNA base pair
def: "An RNAO_base_pair which has cis-Watson--Crick pairing and where the participating bases are AU, CG, GC or UA." [RNAO:ROC]
is_a: RNAO:0000116
[Term]
id: RNAO:0000017
name: nucleobase
def: "A nucleobase is an N-heterocyclic group that forms part of a nucleoside residue." [RNAO:ROC]
is_a: RNAO:0000158
relationship: ro.owl#part_of RNAO:0000186
[Term]
id: RNAO:0000018
name: phosphate moiety
def: "A phosphate group consists of a phosphorus atom doubly-bonded to two oxygen atoms and singly-bonded to two oxygen atoms, both of which have a free valence. Unlike the phosphate group in ChEBI (CHEBI:32958), the RNAO phosphate group has two free valences." [RNAO:ROC]
is_a: RNAO:0000158
[Term]
id: RNAO:0000019
name: ribonucleoside residue
def: "A ribonucleoside consists of a nitrogen heterocycle (a nucleobase) covalently bonded to a ribose ring, with free valences at the 3prime oxgen and 5prime oxygen atoms on the ring." [RNAO:ROC]
is_a: RNAO:0000186
relationship: RNAO:0000222 RNAO:0000021
[Term]
id: RNAO:0000020
name: ribonucleotide residue
def: "A ribonucleotide residue consists of a nitrogen heterocyclic group covalently bonded to the 1prime position of a ribose ring and a phosphate group covalently bonded the 5' oxygen of the ribose ring. There are free valances at the 3'-oxygen of the ribose and on the phosphorus atom of the phosphate group where the ribonucleotide is connected to two other ribonucleotides in the chain." [RNAO:ROC]
is_a: RNAO:0000187
[Term]
id: RNAO:0000021
name: ribose ring
def: "A ribose ring is a furanose ring with free valences at the 4prime position (to bond to the nucleobase), and the 3prime and 5prime positions." [RNAO:ROC]
is_a: RNAO:0000147
[Term]
id: RNAO:0000022
name: 2prime hydroxyl group
is_a: RNAO:0000158
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000023
name: purine nucleobase
def: "A purine nucleobase is a heterocyclic group consisting of a five-membered aromatic ring ortho,para-fused to a six-membered aromatic ring and where the atoms at the 1-, 3-, 7- and 9- positions are nitrogen atoms." [RNAO:ROC]
is_a: RNAO:0000017
[Term]
id: RNAO:0000024
name: pyrimidine nucleobase
def: "A pyrimidine nucleobase is a heterocyclic group consisting of a six-membered ring where the atoms at the 1- and 3-positions are nitrogen atoms." [RNAO:ROC]
is_a: RNAO:0000017
[Term]
id: RNAO:0000025
name: cytosine nucleobase
def: "A cytosine nucleobase is a pyrimidine that contains a 4-amino group and a 2-oxo group and has a free valence at the 1-position." [RNAO:ROC]
is_a: RNAO:0000024
[Term]
id: RNAO:0000026
name: uracil nucleobase
def: "A uracil nucleobase is a pyrimidine nucleobase that contains a 2-oxo group and a 4-oxo group and has a free valence at the 1-position." [RNAO:ROC]
is_a: RNAO:0000024
[Term]
id: RNAO:0000027
name: adenine nucleobase
def: "An adenine nucleobase is a purine nucleobase that contains a 6-amino group and a free valence at the 9-position." [RNAO:ROC]
is_a: RNAO:0000023
[Term]
id: RNAO:0000028
name: guanine nucleobase
def: "A guanine nucleobase is a purine nucleobase that contains a 2-amino group, a 6-oxo group and a free valence at the 9-position." [RNAO:ROC]
is_a: RNAO:0000023
[Term]
id: RNAO:0000029
name: 22 conformation
is_a: RNAO:0000200
[Term]
id: RNAO:0000030
name: 23 conformation
is_a: RNAO:0000200
[Term]
id: RNAO:0000031
name: 32 conformation
is_a: RNAO:0000200
[Term]
id: RNAO:0000032
name: purine ribonucleoside residue
is_a: RNAO:0000019
[Term]
id: RNAO:0000033
name: 33 conformation
is_a: RNAO:0000200
[Term]
id: RNAO:0000034
name: pyrimidine ribonucleoside residue
is_a: RNAO:0000019
[Term]
id: RNAO:0000035
name: cytidine residue
is_a: RNAO:0000034
[Term]
id: RNAO:0000036
name: uridine residue
is_a: RNAO:0000034
[Term]
id: RNAO:0000037
name: adenosine residue
is_a: RNAO:0000032
relationship: ro.owl#has_part RNAO:0000027
[Term]
id: RNAO:0000038
name: guanosine residue
is_a: RNAO:0000032
relationship: ro.owl#has_part RNAO:0000028
[Term]
id: RNAO:0000039
name: 1a conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000040
name: 1c conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000041
name: 1e conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000042
name: 1f conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000043
name: 1g conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000044
name: 1l conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000045
name: 1m conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000046
name: 3a conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000047
name: 3d conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000048
name: 5a conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000049
name: 5d conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000050
name: 5j conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000051
name: 5n conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000052
name: 7a conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000053
name: 7d conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000054
name: 9a conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000055
name: &a conformation
is_a: RNAO:0000033
[Term]
id: RNAO:0000056
name: 1[ conformation
is_a: RNAO:0000031
[Term]
id: RNAO:0000057
name: 1o conformation
is_a: RNAO:0000031
[Term]
id: RNAO:0000058
name: 1t conformation
is_a: RNAO:0000031
[Term]
id: RNAO:0000059
name: 3b conformation
name: 1z conformation
is_a: RNAO:0000031
[Term]
id: RNAO:0000060
name: 5p conformation
is_a: RNAO:0000031
[Term]
id: RNAO:0000061
name: 5q conformation
is_a: RNAO:0000031
[Term]
id: RNAO:0000062
name: 5r conformation
is_a: RNAO:0000031
[Term]
id: RNAO:0000063
name: 5z conformation
is_a: RNAO:0000031
[Term]
id: RNAO:0000064
name: 7p conformation
is_a: RNAO:0000031
[Term]
id: RNAO:0000065
name: 7r conformation
is_a: RNAO:0000031
[Term]
id: RNAO:0000066
name: 1b conformation
is_a: RNAO:0000031
[Term]
id: RNAO:0000067
name: 0a conformation
is_a: RNAO:0000030
[Term]
id: RNAO:0000068
name: 0i conformation
is_a: RNAO:0000030
[Term]
id: RNAO:0000069
name: 0k conformation
is_a: RNAO:0000030
[Term]
id: RNAO:0000070
name: 2a conformation
is_a: RNAO:0000030
[Term]
id: RNAO:0000071
name: 2g conformation
is_a: RNAO:0000030
[Term]
id: RNAO:0000072
name: 2h conformation
is_a: RNAO:0000030
[Term]
id: RNAO:0000073
name: 4a conformation
is_a: RNAO:0000030
[Term]
id: RNAO:0000074
name: 4d conformation
is_a: RNAO:0000030
[Term]
id: RNAO:0000075
name: 4g conformation
is_a: RNAO:0000030
[Term]
id: RNAO:0000076
name: 4n conformation
is_a: RNAO:0000030
[Term]
id: RNAO:0000077
name: 6d conformation
is_a: RNAO:0000030
[Term]
id: RNAO:0000078
name: 6g conformation
is_a: RNAO:0000030
[Term]
id: RNAO:0000079
name: 8d conformation
is_a: RNAO:0000030
[Term]
id: RNAO:0000080
name: 6n conformation
is_a: RNAO:0000030
[Term]
id: RNAO:0000081
name: 6j conformation
is_a: RNAO:0000030
[Term]
id: RNAO:0000082
name: 0b conformation
is_a: RNAO:0000029
[Term]
id: RNAO:0000083
name: 2[ conformation
is_a: RNAO:0000029
[Term]
id: RNAO:0000084
name: 2o conformation
is_a: RNAO:0000029
[Term]
id: RNAO:0000085
name: 2u conformation
is_a: RNAO:0000029
[Term]
id: RNAO:0000086
name: 2z conformation
is_a: RNAO:0000029
[Term]
id: RNAO:0000087
name: 4b conformation
is_a: RNAO:0000029
[Term]
id: RNAO:0000088
name: 4p conformation
is_a: RNAO:0000029
[Term]
id: RNAO:0000089
name: 4s conformation
is_a: RNAO:0000029
[Term]
id: RNAO:0000090
name: 6p conformation
is_a: RNAO:0000029
[Term]
id: RNAO:0000091
name: nucleoside edge
def: "A nucleoside edge is either a Watson-Crick edge or a Hoogsteen edge or a sugar edge." [RNAO:ROC]
is_a: RNAO:0000196
[Term]
id: RNAO:0000092
name: Watson-Crick edge
def: "The Watson-Crick edge of a nucleobase is the preferred edge along which it undergoes hydrogen bonding with other nucleobases." [RNAO:ROC]
is_a: RNAO:0000091
relationship: RNAO:0000350 RNAO:0000017
[Term]
id: RNAO:0000093
name: Hoogsteen edge
def: "The Hoogsteen edge of a nucleobase is the edge of the nucleobase which is not adjacent to the 2prime-hydroxyl group on the ribose ring." [RNAO:ROC]
is_a: RNAO:0000091
relationship: RNAO:0000350 RNAO:0000017
[Term]
id: RNAO:0000094
name: sugar edge
def: "The sugar edge of a nucleoside consists of the edge of the nucleobase adjacent ot the 2prime-hydroxyl group on the ribose ring and the 2prime-hydroxyl group on the ribose ring." [RNAO:ROC]
is_a: RNAO:0000091
relationship: RNAO:0000350 RNAO:0000019
[Term]
id: RNAO:0000095
name: paired region
def: "A collection of one or more adjacent nucleotide residues in which at least one residue is part of a base pair." [RNAO:ROC]
is_a: RNAO:0000108
relationship: ro.owl#has_proper_part RNAO:0000001
[Term]
id: RNAO:0000096
name: unpaired region
def: "A collection of one or more nucleotides that are not involved in base pairing." [RNAO:ROC]
is_a: RNAO:0000108
[Term]
id: RNAO:0000097
name: unbroken stem
def: "A paired region made up of two contiguous collections of nucleotides, in which each nucleotide forms a base pair." [RNAO:ROC]
is_a: RNAO:0000095
[Term]
id: RNAO:0000098
name: terminal loop
def: "A contiguous sequence of nucleotide residues that directly links the two halves of an unbroken stem (but does not participate in the stem); this structure is also known as a \"hairpin loop\". Because a terminal loop may also participate in other inter-base interactions, (a) it is defined relative to a particular unbroken_stem, and (b) it is not implicitly defined as unpaired (or paired)." [RNAO:ROC]
is_a: RNAO:0000108
[Term]
id: RNAO:0000099
name: internal loop
def: "A collection of nucleotide residues that link two given unbroken_stems." [RNAO:ROC]
is_a: RNAO:0000108
[Term]
id: RNAO:0000100
name: purine ribonucleotide
is_a: RNAO:0000020
[Term]
id: RNAO:0000101
name: pyrimidine ribonucleotide
is_a: RNAO:0000020
[Term]
id: RNAO:0000102
name: cytidylate residue
is_a: RNAO:0000101
[Term]
id: RNAO:0000103
name: uridylate residue
is_a: RNAO:0000101
[Term]
id: RNAO:0000104
name: adenylate residue
is_a: RNAO:0000100
[Term]
id: RNAO:0000105
name: guanylate residue
is_a: RNAO:0000100
[Term]
id: RNAO:0000106
name: stem junction
def: "A collection of nucleotide residues consisting of all and only the nucleotide regions that link more than two unbroken stems such that each region links exactly two unbroken stems. This term is defined relative to the particular unbroken_stems involved and, again, does not imply anything about the pairedness/unpairedness of the bases in this region. The degree of a junction is a property (e.g. 3-junction, 4-junction), so the different degrees do not get separate entries in the ontology." [RNAO:ROC]
is_a: RNAO:0000108
[Term]
id: RNAO:0000107
name: strand end
def: "A sequence_region bounded at one end by the 5prime or 3prime end of the molecule, and at the other by an unbroken_stem." [RNAO:ROC]
is_a: RNAO:0000108
[Term]
id: RNAO:0000108
name: collection of nucleotides residues
def: "A collection of nucleotide residues is a part of a nucleic acid consisting of one or more nucleotides." [RNAO:ROC]
is_a: RNAO:0000182
relationship: ro.owl#part_of RNAO:0000201
[Term]
id: RNAO:0000109
name: 3prime end
is_a: RNAO:0000219
[Term]
id: RNAO:0000110
name: collection of material entities
is_a: snap#MaterialEntity
relationship: RNAO:0000354 snap#MaterialEntity
[Term]
id: RNAO:0000111
name: 5prime end
is_a: RNAO:0000219
[Term]
id: RNAO:0000112
name: conformation
def: "The spatial arrangement of the atoms in a molecule or molecular part affording distinction between stereoisomers which can be interconverted by rotations about formally single bonds." [RNAO:ROC]
is_a: snap#Quality
[Term]
id: RNAO:0000113
name: base pair orientation
def: "A conformation that inheres in an RNA base pair. It may be cis- or trans- depending on the orientations of the ribose rings relative to the edge-edge interaction of the nucleobases." [RNAO:ROC]
is_a: RNAO:0000112
[Term]
id: RNAO:0000114
name: base pair cis-orientation
def: "A base pair conformation where the ribose rings are on the same side of a plane drawn through the middle of the edge-edge hydrogen bonds." [RNAO:ROC]
is_a: RNAO:0000113
[Term]
id: RNAO:0000115
name: base pair trans-orientation
def: "A base pair conformation where the ribose rings are on opposite sides of a plane drawn through the middle of the edge-edge hydrogen bonds." [RNAO:ROC]
is_a: RNAO:0000113
[Term]
id: RNAO:0000116
name: cis-oriented base pair
is_a: RNAO:0000001
[Term]
id: RNAO:0000117
name: trans-oriented base pair
is_a: RNAO:0000001
[Term]
id: RNAO:0000118
name: collection of atoms
is_a: RNAO:0000110
[Term]
id: RNAO:0000119
name: covalent boundary
is_a: RNAO:0000196
[Term]
id: RNAO:0000120
name: non-covalent boundary
is_a: RNAO:0000196
[Term]
id: RNAO:0000121
name: nucleoside conformation
def: "A conformation that inheres in an nucleoside based on the rotation of the nucleobase about the glycosidic torsion angle χ with the furanose." [RNAO:ROC]
is_a: RNAO:0000112
[Term]
id: RNAO:0000122
name: syn nucleoside conformation
def: "A syn nucleoside conformation is a nucleoside conformation characterized by the nucleobase being oriented towards the ribose due to rotation about the glycosidic torsion angle χ. From χ = 0°, where the plane of the base is aligned with the O4’-C1’ bond in a direction towards the O4’ atom, the syn conformation covers the remaining rotations of ±90°: χ = [-90°, 90°]." [RNAO:ROC]
is_a: RNAO:0000121
[Term]
id: RNAO:0000123
name: anti nucleoside conformation
def: "A anti nucleoside conformation is a nucleoside conformation characterized by the nucleobase being oriented away from the ribose due to rotation about the glycosidic torsion angle χ. From χ = 180°, where the plane of the base is aligned with the O4’-C1’ bond in a direction away from the O4’ atom, the anti conformation covers a rotations of ±90°: χ = [-180°, 90°]." [RNAO:ROC]
is_a: RNAO:0000121
[Term]
id: RNAO:0000124
name: envelope conformation
def: "An envelope conformation is a furan ring conformation in which only one of the five fruan atoms (C1’, C2’, C3’, C4’ or O4’) is out of the plane formed by the four others." [RNAO:ROC]
is_a: RNAO:0000126
[Term]
id: RNAO:0000125
name: twist conformation
def: "An envelope conformation is a furan ring conformation in which two atoms are in opposite sides of the plane formed by the remaining three." [RNAO:ROC]
is_a: RNAO:0000126
[Term]
id: RNAO:0000126
name: furan ring conformation
def: "A furan ring conformation is a conformation that inheres in a furan ring and is characterized by the values of torsion angles: θ0-4." [RNAO:ROC]
is_a: RNAO:0000112
[Term]
id: RNAO:0000127
name: C2prime-endo pucker
def: "C2prime-endo pucker (2E conformation) is an envelope conformation in which the C2prime atom is above the plane formed by the other 4 atoms." [RNAO:ROC]
is_a: RNAO:0000124
[Term]
id: RNAO:0000128
name: C3prime-endo pucker
def: "C3prime-endo pucker (An 3E conformation) is an envelope conformation in which the C3prime atom is above the plane formed by the other 4 atoms." [RNAO:ROC]
is_a: RNAO:0000124
[Term]
id: RNAO:0000129
name: C4prime-exo pucker
def: "C4prime-exo pucker (E4 conformation) is an envelope conformation in which the C4prime atom is below the plane formed by the other 4 atoms." [RNAO:ROC]
is_a: RNAO:0000124
[Term]
id: RNAO:0000130
name: C3prime-endo - C4prime -exo pucker
def: "C3prime-endo - C4prime exo pucker (3E4 conformation) is a twist conformation in which the C3prime atom is above the plane and the C4prime atom is below the plane." [RNAO:ROC]
is_a: RNAO:0000125
[Term]
id: RNAO:0000131
name: C3prime-endo - C2prime -exo pucker
def: "C3prime-endo - C2prime exo pucker (3E2 conformation) is a twist conformation in which the C3prime atom is above the plane and the C2prime atom is below the plane." [RNAO:ROC]
is_a: RNAO:0000125
[Term]
id: RNAO:0000132
name: base stack
def: "A base stack consists of a pair of nucleotides that interact by London dispersion inter-molecular interactions between their nucleobases such that one base is stacked on top of the other." [RNAO:ROC]
is_a: snap#MaterialEntity
relationship: ro.owl#has_quality RNAO:0000135
[Term]
id: RNAO:0000133
name: adjacent base stack
def: "An adjacent base stack is a base stack between a pair of sequence-adjacent nucleotides." [RNAO:ROC]
is_a: RNAO:0000132
relationship: ro.owl#has_quality RNAO:0000145
[Term]
id: RNAO:0000134
name: non-adjacent base stack
def: "A non-adjacent base stack is a base stack between a pair of non sequence-adjacent nucleotides." [RNAO:ROC]
is_a: RNAO:0000132
relationship: ro.owl#has_quality RNAO:0000146
[Term]
id: RNAO:0000135
name: base stack orientation
def: "A base stack orientation is a conformation that inheres in a base stack by virtue of the orientation of the nucleobases relative to i) the alignment of base normals and ii) their sequence adjacency." [RNAO:ROC]
is_a: RNAO:0000112
[Term]
id: RNAO:0000136
name: #a conformation
is_a: RNAO:0000030
[Term]
id: RNAO:0000137
name: backbone
is_a: RNAO:0000158
[Term]
id: RNAO:0000138
name: base stack straight orientation
def: "An base stack straight orientation is a base stack orientation in which the normals of both bases are aligned in the same direction." [RNAO:ROC]
is_a: RNAO:0000140
[Term]
id: RNAO:0000139
name: base stack reverse orientation
def: "A base stack reverse orientation is a base stack orientation in which the normals of both bases are aligned in the opposite directions." [RNAO:ROC]
is_a: RNAO:0000140
[Term]
id: RNAO:0000140
name: base stack base-normal orientation
def: "A base stack base-normal orientation is a base stack orientation that depends on the relative orientation of the base normals." [RNAO:ROC]
is_a: RNAO:0000135
[Term]
id: RNAO:0000141
name: molecule
is_a: snap#MaterialEntity
[Term]
id: RNAO:0000142
name: base stack above orientation
def: "A base stack above orientation is a base stack orientation in which the second base (B) is in the same direction as the normal to the first base (A)." [RNAO:ROC]
is_a: RNAO:0000140
[Term]
id: RNAO:0000143
name: base stack below orientation
def: "A base stack below orientation is a base stack orientation in which the normal of the second base (B) is directed towards the first base (A)." [RNAO:ROC]
is_a: RNAO:0000140
[Term]
id: RNAO:0000144
name: base stack sequence adjacency
def: "A base stack sequence adjacency is a base stack orientation that depends on whether the stacked nucleobases are part of nucleotides that are sequence adjacent or not." [RNAO:ROC]
is_a: RNAO:0000135
[Term]
id: RNAO:0000145
name: base stack adjacent base orientation
def: "A base stack adjacent orientation is a base stack orientation in which the stacked nucleobases are part of nucleotides that are sequence adjacent." [RNAO:ROC]
is_a: RNAO:0000144
[Term]
id: RNAO:0000146
name: base stack non-adjacent base orientation
def: "A base stack non-adjacent orientation is a base stack orientation in which the stacked nucleobases are part of nucleotides that are not sequence adjacent." [RNAO:ROC]
is_a: RNAO:0000144
[Term]
id: RNAO:0000147
name: furanose ring
def: "A furanose ring is a ring that consists of four carbon and one oxygen atom and has free valences at each carbon position." [RNAO:ROC]
is_a: RNAO:0000158
[Term]
id: RNAO:0000148
name: upward base stack
def: "An upward base stack is a base stack that exhibits both an straight orientation and an above orientation." [RNAO:ROC]
is_a: RNAO:0000132
relationship: ro.owl#has_quality RNAO:0000142
relationship: ro.owl#has_quality RNAO:0000138
[Term]
id: RNAO:0000149
name: downward base stack
def: "A downward base stack is a base stack that exhibits both an straight orientation and a below orientation." [RNAO:ROC]
is_a: RNAO:0000132
relationship: ro.owl#has_quality RNAO:0000143
relationship: ro.owl#has_quality RNAO:0000138
[Term]
id: RNAO:0000150
name: inward base stack
def: "An inward base stack is a base stack that exhibits both a reverse orientation and an above orientation." [RNAO:ROC]
is_a: RNAO:0000132
relationship: ro.owl#has_quality RNAO:0000138
relationship: ro.owl#has_quality RNAO:0000142
[Term]
id: RNAO:0000151
name: outward base stack
def: "An outward base stack is a base stack that exhibits both a reverse orientation and a below orientation." [RNAO:ROC]
is_a: RNAO:0000132
relationship: ro.owl#has_quality RNAO:0000138
relationship: ro.owl#has_quality RNAO:0000142
[Term]
id: RNAO:0000152
name: purine Hoogsteen edge
[Term]
id: RNAO:0000153
name: pyrimidine Hoogsteen edge
[Term]
id: RNAO:0000154
name: purine Watson-Crick edge
[Term]
id: RNAO:0000155
name: pyrimidine Watson-Crick edge
[Term]
id: RNAO:0000156
name: purine sugar edge
is_a: RNAO:0000094
[Term]
id: RNAO:0000157
name: pyrimidine sugar edge
is_a: RNAO:0000094
[Term]
id: RNAO:0000158
name: submolecule
def: "a submolecule is a part of a molecule that consists of covalently bonded sum of a collection of atoms." [RNAO:ROC]
is_a: RNAO:0000181
relationship: ro.owl#part_of RNAO:0000141
[Term]
id: RNAO:0000159
name: pyrimidine O4 atom
is_a: RNAO:0000522
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000160
name: purine C2 atom
is_a: RNAO:0000511
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000161
name: pyrimidine N4 atom
is_a: RNAO:0000524
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000162
name: purine N1 atom
is_a: RNAO:0000523
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000163
name: purine N6 atom
is_a: RNAO:0000523
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000164
name: pyrimidine O2 atom
is_a: RNAO:0000522
[Term]
id: RNAO:0000165
name: pyrimidine N3 atom
is_a: RNAO:0000524
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000166
name: purine N3 atom
is_a: RNAO:0000523
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000167
name: ribose O2prime atom
is_a: RNAO:0000521
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000168
name: RNA backbone
is_a: RNAO:0000137
relationship: ro.owl#part_of RNAO:0000000
[Term]
id: RNAO:0000169
name: purine H2 atom
is_a: RNAO:0000518
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000170
name: pyrimidine H3 atom
is_a: RNAO:0000519
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000171
name: purine H8 atom
is_a: RNAO:0000518
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000172
name: purine C8 atom
is_a: RNAO:0000511
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000173
name: purine N7 atom
is_a: RNAO:0000523
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000174
name: purine H62 atom
is_a: RNAO:0000518
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000175
name: purine O6 atom
is_a: CHEBI:25805
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000176
name: pyrimidine H5 atom
is_a: RNAO:0000519
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000177
name: pyrimidine C5 atom
is_a: RNAO:0000514
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000178
name: pyrimidine C4 atom
is_a: RNAO:0000514
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000179
name: pyrimidine C6 atom
is_a: RNAO:0000514
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000180
name: purine H61 atom
is_a: RNAO:0000518
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000181
name: part of molecule
def: "a part of molecule is some part of a molecule." [RNAO:ROC]
is_a: snap#MaterialEntity
[Term]
id: RNAO:0000182
name: collection of biopolymer residues
is_a: RNAO:0000110
[Term]
id: RNAO:0000183
name: nucleobase face
is_a: RNAO:0000196
[Term]
id: RNAO:0000184
name: 5prime face
is_a: RNAO:0000183
[Term]
id: RNAO:0000185
name: 3prime face
is_a: RNAO:0000183
[Term]
id: RNAO:0000186
name: nucleoside residue
is_a: RNAO:0000158
relationship: ro.owl#has_part RNAO:0000017
relationship: ro.owl#has_part RNAO:0000147
[Term]
id: RNAO:0000187
name: nucleotide residue
is_a: RNAO:0000158
relationship: ro.owl#has_part RNAO:0000186
[Term]
id: RNAO:0000188
name: mereologically maximal object
is_a: snap#MaterialEntity
[Term]
id: RNAO:0000189
name: linear RNA backbone
is_a: RNAO:0000168
[Term]
id: RNAO:0000190
name: mereological sum of collection
is_a: snap#MaterialEntity
[Term]
id: RNAO:0000196
name: boundary
def: "A boundary is a region at which connections can be formed." [RNAO:ROC]
is_a: snap#DependentContinuant
relationship: RNAO:0000350 snap#MaterialEntity
[Term]
id: RNAO:0000200
name: backbone conformation
is_a: RNAO:0000112
[Term]
id: RNAO:0000201
name: nucleic acid
is_a: RNAO:0000141
[Term]
id: RNAO:0000203
name: external boundary
is_a: RNAO:0000196
[Term]
id: RNAO:0000216
name: ribose O3prime atom
is_a: RNAO:0000521
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000217
name: ribose C3prime atom
is_a: RNAO:0000512
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000219
name: terminal boundary of linear biopolymer
is_a: RNAO:0000196
[Term]
id: RNAO:0000400
name: uracil O4 atom
is_a: RNAO:0000159
relationship: ro.owl#part_of RNAO:0000503
relationship: ro.owl#part_of RNAO:0000475
relationship: ro.owl#part_of RNAO:0000026
[Term]
id: RNAO:0000401
name: cytosine O2 atom
is_a: RNAO:0000164
relationship: ro.owl#part_of RNAO:0000025
relationship: ro.owl#part_of RNAO:0000506
relationship: ro.owl#part_of RNAO:0000474
[Term]
id: RNAO:0000402
name: uracil O2 atom
is_a: RNAO:0000164
relationship: ro.owl#part_of RNAO:0000475
relationship: ro.owl#part_of RNAO:0000507
relationship: ro.owl#part_of RNAO:0000026
[Term]
id: RNAO:0000403
name: guanine O6 atom
is_a: RNAO:0000175
relationship: ro.owl#part_of RNAO:0000028
relationship: ro.owl#part_of RNAO:0000473
relationship: ro.owl#part_of RNAO:0000501
[Term]
id: RNAO:0000404
name: adenine C2 atom
is_a: RNAO:0000160
relationship: ro.owl#part_of RNAO:0000504
relationship: ro.owl#part_of RNAO:0000472
relationship: ro.owl#part_of RNAO:0000027
[Term]
id: RNAO:0000406
name: adenine C8 atom
is_a: RNAO:0000172
relationship: ro.owl#part_of RNAO:0000027
relationship: ro.owl#part_of RNAO:0000500
[Term]
id: RNAO:0000407
name: guanine C8 atom
is_a: RNAO:0000172
relationship: ro.owl#part_of RNAO:0000028
relationship: ro.owl#part_of RNAO:0000501
[Term]
id: RNAO:0000408
name: cytosine C5 atom
is_a: RNAO:0000177
relationship: ro.owl#part_of RNAO:0000502
relationship: ro.owl#part_of RNAO:0000025
[Term]
id: RNAO:0000409
name: uracil C5 atom
is_a: RNAO:0000177
relationship: ro.owl#part_of RNAO:0000026
relationship: ro.owl#part_of RNAO:0000503
[Term]
id: RNAO:0000410
name: cytosine C4 atom
is_a: RNAO:0000178
relationship: ro.owl#part_of RNAO:0000025
[Term]
id: RNAO:0000411
name: uracil C4 atom
is_a: RNAO:0000178
relationship: ro.owl#part_of RNAO:0000026
[Term]
id: RNAO:0000412
name: uracil C6 atom
is_a: RNAO:0000179
relationship: ro.owl#part_of RNAO:0000503
relationship: ro.owl#part_of RNAO:0000026
[Term]
id: RNAO:0000413
name: cytosine C6 atom
is_a: RNAO:0000179
relationship: ro.owl#part_of RNAO:0000502
relationship: ro.owl#part_of RNAO:0000025
[Term]
id: RNAO:0000414
name: adenine H2 atom
is_a: RNAO:0000169
relationship: ro.owl#part_of RNAO:0000472
relationship: ro.owl#part_of RNAO:0000027
relationship: ro.owl#part_of RNAO:0000504
[Term]
id: RNAO:0000415
name: cytosine N4 atom
is_a: RNAO:0000161
relationship: ro.owl#part_of RNAO:0000025
relationship: ro.owl#part_of RNAO:0000474
relationship: ro.owl#part_of RNAO:0000502
[Term]
id: RNAO:0000416
name: adenine N1 atom
is_a: RNAO:0000162
relationship: ro.owl#part_of RNAO:0000472
relationship: ro.owl#part_of RNAO:0000027
[Term]
id: RNAO:0000417
name: adenine N6 atom
is_a: RNAO:0000163
relationship: ro.owl#part_of RNAO:0000472
relationship: ro.owl#part_of RNAO:0000027
relationship: ro.owl#part_of RNAO:0000500
[Term]
id: RNAO:0000418
name: cytosine N3 atom
is_a: RNAO:0000165
relationship: ro.owl#part_of RNAO:0000474
relationship: ro.owl#part_of RNAO:0000025
[Term]
id: RNAO:0000419
name: uracil N3 atom
is_a: RNAO:0000165
relationship: ro.owl#part_of RNAO:0000026
relationship: ro.owl#part_of RNAO:0000475
[Term]
id: RNAO:0000420
name: adenine N3 atom
is_a: RNAO:0000166
relationship: ro.owl#part_of RNAO:0000027
relationship: ro.owl#part_of RNAO:0000504
[Term]
id: RNAO:0000422
name: guanine C2 atom
is_a: RNAO:0000160
relationship: ro.owl#part_of RNAO:0000028
[Term]
id: RNAO:0000423
name: uracil H3 atom
is_a: RNAO:0000170
relationship: ro.owl#part_of RNAO:0000026
relationship: ro.owl#part_of RNAO:0000475
[Term]
id: RNAO:0000424
name: guanine H8 atom
is_a: RNAO:0000171
relationship: ro.owl#part_of RNAO:0000501
relationship: ro.owl#part_of RNAO:0000028
[Term]
id: RNAO:0000425
name: adenine H8 atom
is_a: RNAO:0000171
relationship: ro.owl#part_of RNAO:0000500
relationship: ro.owl#part_of RNAO:0000027
[Term]
id: RNAO:0000426
name: adenine H62 atom
is_a: RNAO:0000174
relationship: ro.owl#part_of RNAO:0000027
relationship: ro.owl#part_of RNAO:0000500
[Term]
id: RNAO:0000427
name: cytosine H5 atom
is_a: RNAO:0000176
relationship: ro.owl#part_of RNAO:0000502
relationship: ro.owl#part_of RNAO:0000025
[Term]
id: RNAO:0000428
name: uracil H5 atom
is_a: RNAO:0000176
relationship: ro.owl#part_of RNAO:0000026
relationship: ro.owl#part_of RNAO:0000503
[Term]
id: RNAO:0000430
name: adenine H61 atom
is_a: RNAO:0000180
relationship: ro.owl#part_of RNAO:0000027
[Term]
id: RNAO:0000431
name: guanine N1 atom
is_a: RNAO:0000162
relationship: ro.owl#part_of RNAO:0000473
relationship: ro.owl#part_of RNAO:0000028
[Term]
id: RNAO:0000432
name: guanine N3 atom
is_a: RNAO:0000166
relationship: ro.owl#part_of RNAO:0000505
relationship: ro.owl#part_of RNAO:0000028
[Term]
id: RNAO:0000433
name: adenine N7 atom
is_a: RNAO:0000173
relationship: ro.owl#part_of RNAO:0000027
relationship: ro.owl#part_of RNAO:0000500
[Term]
id: RNAO:0000434
name: guanine N7 atom
is_a: RNAO:0000173
relationship: ro.owl#part_of RNAO:0000028
relationship: ro.owl#part_of RNAO:0000501
[Term]
id: RNAO:0000437
name: pyrimidine H6 atom
is_a: RNAO:0000519
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000438
name: cytosine H6 atom
is_a: RNAO:0000437
relationship: ro.owl#part_of RNAO:0000502
relationship: ro.owl#part_of RNAO:0000025
[Term]
id: RNAO:0000439
name: uracil H6 atom
is_a: RNAO:0000437
relationship: ro.owl#part_of RNAO:0000026
relationship: ro.owl#part_of RNAO:0000503
[Term]
id: RNAO:0000440
name: purine N9 atom
is_a: RNAO:0000523
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000441
name: adenine N9 atom
is_a: RNAO:0000440
relationship: ro.owl#part_of RNAO:0000027
[Term]
id: RNAO:0000442
name: guanine N9 atom
is_a: RNAO:0000440
relationship: ro.owl#part_of RNAO:0000028
[Term]
id: RNAO:0000443
name: purine N2 atom
is_a: RNAO:0000523
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000444
name: guanine N2 atom
is_a: RNAO:0000443
relationship: ro.owl#part_of RNAO:0000028
relationship: ro.owl#part_of RNAO:0000473
relationship: ro.owl#part_of RNAO:0000505
[Term]
id: RNAO:0000445
name: purine H21 atom
is_a: RNAO:0000518
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000446
name: purine H22 atom
is_a: RNAO:0000518
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000447
name: guanine H22 atom
is_a: RNAO:0000446
relationship: ro.owl#part_of RNAO:0000505
relationship: ro.owl#part_of RNAO:0000028
[Term]
id: RNAO:0000448
name: guanine H21 atom
is_a: RNAO:0000445
relationship: ro.owl#part_of RNAO:0000028
relationship: ro.owl#part_of RNAO:0000473
[Term]
id: RNAO:0000449
name: pyrimidine H41 atom
is_a: RNAO:0000519
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000450
name: pyrimidine H42 atom
is_a: RNAO:0000519
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000451
name: cytosine H42 atom
is_a: RNAO:0000450
relationship: ro.owl#part_of RNAO:0000502
relationship: ro.owl#part_of RNAO:0000025
[Term]
id: RNAO:0000452
name: cytosine H41 atom
is_a: RNAO:0000449
relationship: ro.owl#part_of RNAO:0000474
relationship: ro.owl#part_of RNAO:0000025
[Term]
id: RNAO:0000453
name: ribose O4prime atom
is_a: RNAO:0000521
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000454
name: ribose O5prime atom
is_a: RNAO:0000521
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000455
name: ribose C1prime atom
is_a: RNAO:0000512
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000456
name: ribose C2prime atom
is_a: RNAO:0000512
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000457
name: ribose C4prime atom
is_a: RNAO:0000512
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000458
name: ribose C5prime atom
is_a: RNAO:0000512
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000460
name: ribose H1prime atom
is_a: RNAO:0000525
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000461
name: ribose H2prime atom
is_a: RNAO:0000525
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000462
name: ribose H3prime atom
is_a: RNAO:0000525
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000463
name: ribose H4prime atom
is_a: RNAO:0000525
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000464
name: ribose H51prime atom
is_a: RNAO:0000525
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000465
name: ribose H52prime atom
is_a: RNAO:0000525
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000466
name: ribose OH2prime atom
is_a: RNAO:0000525
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000467
name: ribose OH3prime atom
is_a: RNAO:0000525
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000468
name: ribose OH5prime atom
is_a: RNAO:0000525
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000469
name: phosphate moiety O1P atom
is_a: RNAO:0000520
relationship: ro.owl#part_of RNAO:0000018
[Term]
id: RNAO:0000470
name: phosphate moiety O2P atom
is_a: RNAO:0000520
relationship: ro.owl#part_of RNAO:0000018
[Term]
id: RNAO:0000471
name: phosphate moiety phosphate atom
is_a: CHEBI:28659
relationship: ro.owl#part_of RNAO:0000018
[Term]
id: RNAO:0000472
name: adenosine Watson-Crick edge
is_a: RNAO:0000154
[Term]
id: RNAO:0000473
name: guanosine Watson-Crick edge
is_a: RNAO:0000154
[Term]
id: RNAO:0000474
name: cytidine Watson-Crick edge
is_a: RNAO:0000155
relationship: ro.owl#part_of RNAO:0000025
[Term]
id: RNAO:0000475
name: uridine Watson-Crick edge
is_a: RNAO:0000155
relationship: ro.owl#part_of RNAO:0000026
[Term]
id: RNAO:0000476
name: adenine nucleobase functional derivative
is_a: RNAO:1000014
[Term]
id: RNAO:0000477
name: guanine nucleobase functional derivative
is_a: RNAO:1000014
[Term]
id: RNAO:0000478
name: cytosine nucleobase functional derivative
is_a: RNAO:1000015
[Term]
id: RNAO:0000479
name: uracil nucleobase functional derivative
is_a: RNAO:1000015
[Term]
id: RNAO:0000500
name: adenosine Hoogsteen edge
is_a: RNAO:0000152
[Term]
id: RNAO:0000501
name: guanosine Hoogsteen edge
is_a: RNAO:0000152
[Term]
id: RNAO:0000502
name: cytidine Hoogsteen edge
is_a: RNAO:0000153
[Term]
id: RNAO:0000503
name: uridine Hoogsteen edge
is_a: RNAO:0000153
[Term]
id: RNAO:0000504
name: adenosine sugar edge
is_a: RNAO:0000156
[Term]
id: RNAO:0000505
name: guanosine sugar edge
is_a: RNAO:0000156
[Term]
id: RNAO:0000506
name: cytidine sugar edge
is_a: RNAO:0000157
[Term]
id: RNAO:0000507
name: uridine sugar edge
is_a: RNAO:0000157
[Term]
id: RNAO:0000508
name: purine C6 atom
is_a: RNAO:0000511
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000509
name: guanine C6 atom
is_a: RNAO:0000508
relationship: ro.owl#part_of RNAO:0000028
[Term]
id: RNAO:0000510
name: adenine C6 atom
is_a: RNAO:0000508
relationship: ro.owl#part_of RNAO:0000027
[Term]
id: RNAO:0000511
name: purine carbon atom
is_a: CHEBI:27594
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000512
name: ribose carbon atom
is_a: CHEBI:27594
relationship: ro.owl#part_of RNAO:0000021
[Term]
id: RNAO:0000513
name: imidazopurine carbon atom
is_a: CHEBI:27594
[Term]
id: RNAO:0000514
name: pyrimidine carbon atom
is_a: CHEBI:27594
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000515
name: pyrimidine C2 atom
is_a: RNAO:0000514
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000516
name: cytosine C2 atom
is_a: RNAO:0000515
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000517
name: uracil C2 atom
is_a: RNAO:0000515
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000518
name: purine hydrogen atom
is_a: CHEBI:29235
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000519
name: pyrimidine hydrogen atom
is_a: CHEBI:29235
[Term]
id: RNAO:0000520
name: phosphate moiety oxygen atom
is_a: CHEBI:25805
relationship: ro.owl#part_of RNAO:0000018
[Term]
id: RNAO:0000521
name: ribose oxygen atom
is_a: CHEBI:25805
[Term]
id: RNAO:0000522
name: pyrimidine oxygen atom
is_a: CHEBI:25805
[Term]
id: RNAO:0000523
name: purine nitrogen atom
is_a: CHEBI:29351
relationship: ro.owl#part_of RNAO:0000023
[Term]
id: RNAO:0000524
name: pyrimidine nitrogen atom
is_a: CHEBI:29351
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000525
name: ribose hydrogen atom
is_a: CHEBI:29235
[Term]
id: RNAO:0000526
name: purine H1 atom
is_a: RNAO:0000518
[Term]
id: RNAO:0000527
name: guanine H1 atom
is_a: RNAO:0000526
relationship: ro.owl#part_of RNAO:0000473
relationship: ro.owl#part_of RNAO:0000028
[Term]
id: RNAO:0000528
name: cytidine ribose O 2prime atom
is_a: RNAO:0000167
relationship: ro.owl#part_of RNAO:0000035
relationship: ro.owl#part_of RNAO:0000506
[Term]
id: RNAO:0000529
name: uridine ribose O 2prime atom
is_a: RNAO:0000167
relationship: ro.owl#part_of RNAO:0000507
relationship: ro.owl#part_of RNAO:0000036
[Term]
id: RNAO:0000530
name: pyrimidine N1 atom
is_a: RNAO:0000524
relationship: ro.owl#part_of RNAO:0000024
[Term]
id: RNAO:0000531
name: adenosine ribonucleoside residue functional derivative
is_a: RNAO:1000016
[Term]
id: RNAO:0000532
name: guanosine ribonucleoside residue functional derivative
is_a: RNAO:1000016
[Term]
id: RNAO:0000533
name: cytidine ribonucleoside residue functional derivative
is_a: RNAO:1000017
[Term]
id: RNAO:0000534
name: uridine ribonucleoside residue functional derivative
is_a: RNAO:1000017
[Term]
id: RNAO:0000535
name: adenylate residue functional derivative
is_a: RNAO:1000018
[Term]
id: RNAO:0000536
name: guanylate residue functional derivative
is_a: RNAO:1000018
[Term]
id: RNAO:0000537
name: cytidylate residue functional derivative
is_a: RNAO:1000019
[Term]
id: RNAO:0000538
name: uridylate residue functional derivative
is_a: RNAO:1000019
[Term]
id: RNAO:1000014
name: purine nucleobase functional derivative
is_a: RNAO:0000023
[Term]
id: RNAO:1000015
name: pyrimidine nucleobase functional derivative
is_a: RNAO:0000024
[Term]
id: RNAO:1000016
name: purine ribonucleoside residue functional derivative
is_a: RNAO:0000032
[Term]
id: RNAO:1000017
name: pyrimidine ribonucleoside residue functional derivative
is_a: RNAO:0000034
[Term]
id: RNAO:1000018
name: purine ribonucleotide functional derivative
is_a: RNAO:0000100
[Term]
id: RNAO:1000019
name: pyrimidine ribonucleotide functional derivative
is_a: RNAO:0000101
[Term]
id: RNAO:1000020
name: ribose ring functional derivative
is_a: RNAO:0000021
[Term]
id: RNAO:1000021
name: phosphate moiety functional derivative
is_a: RNAO:0000018
[Term]
id: RNAO:1000022
name: 5prime cap structure
is_a: RNAO:0000158
relationship: RNAO:0000352 RNAO:0000111
[Term]
id: RNAO:1000024
name: N6-methyladenine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000030
name: 2prime-O-methylribose ring
is_a: RNAO:1000020
relationship: has_functional_parent RNAO:0000021
[Term]
id: RNAO:1000034
name: N6-methyladenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000035
name: inosylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000036
name: dihydrouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000037
name: 2prime-O-methyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000038
name: 2prime-O-methyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000039
name: 2prime-O-methyladenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000040
name: 1-methyladenine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000041
name: 1-methyladenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000042
name: 2-methyladenine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000043
name: 2-methyladenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000044
name: N6,N6-dimethyladenine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000045
name: N6,N6-dimethyladenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000047
name: 1,2prime-O-dimethyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000048
name: 1,2prime-O-methyladenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000050
name: N6,2prime-O-dimethyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000051
name: N6,2prime-O-dimethyladenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000053
name: N6,N6,2prime-O-trimethyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000054
name: N6,N6,2prime-O-trimethyladenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000055
name: 1-methylhypoxanthine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000056
name: 1-methylinosylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000057
name: 2prime-O-methylinosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000058
name: 2prime-O-methylinosylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000059
name: 1,2prime-O-dimethylinosylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000060
name: 1,2prime-O-dimethylinosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000061
name: 2prime-O-methylcytidylate residue
is_a: RNAO:0000537
relationship: has_functional_parent RNAO:0000102
[Term]
id: RNAO:1000062
name: 3-methylcytosine nucleobase
is_a: RNAO:0000478
relationship: has_functional_parent RNAO:0000025
[Term]
id: RNAO:1000064
name: 3-methylcytidylate residue
is_a: RNAO:0000537
relationship: has_functional_parent RNAO:0000102
[Term]
id: RNAO:1000065
name: N4-methylcytosine nucleobase
is_a: RNAO:0000478
relationship: has_functional_parent RNAO:0000025
[Term]
id: RNAO:1000066
name: N4-methylcytidine residue
is_a: RNAO:0000533
relationship: has_functional_parent RNAO:0000035
[Term]
id: RNAO:1000067
name: N4-methylcytidylate residue
is_a: RNAO:0000537
relationship: has_functional_parent RNAO:0000102
[Term]
id: RNAO:1000068
name: 5-methylcytosine nucleobase
is_a: RNAO:0000478
relationship: has_functional_parent RNAO:0000025
[Term]
id: RNAO:1000069
name: 5-methylcytidylate residue
is_a: RNAO:0000537
relationship: has_functional_parent RNAO:0000102
[Term]
id: RNAO:1000070
name: N4,2prime-O-dimethylcytidine residue
is_a: RNAO:0000533
relationship: has_functional_parent RNAO:0000035
[Term]
id: RNAO:1000071
name: N4,2prime-O-dimethylcytidylate residue
is_a: RNAO:0000537
relationship: has_functional_parent RNAO:0000102
[Term]
id: RNAO:1000072
name: N4,N4-dimethylcytosine nucleobase
is_a: RNAO:0000478
relationship: has_functional_parent RNAO:0000025
[Term]
id: RNAO:1000073
name: N4,N4-dimethylcytidine residue
is_a: RNAO:0000533
relationship: has_functional_parent RNAO:0000035
[Term]
id: RNAO:1000074
name: N4,N4-dimethylcytidylate residue
is_a: RNAO:0000537
relationship: has_functional_parent RNAO:0000102
[Term]
id: RNAO:1000075
name: N4,N4,2prime-O-trimethylcytidine residue
is_a: RNAO:0000533
relationship: has_functional_parent RNAO:0000035
[Term]
id: RNAO:1000076
name: N4,N4,2prime-O-trimethylcytidylate residue
is_a: RNAO:0000537
relationship: has_functional_parent RNAO:0000102
[Term]
id: RNAO:1000077
name: 5,2prime-O-dimethylcytidine residue
is_a: RNAO:0000533
relationship: has_functional_parent RNAO:0000035
[Term]
id: RNAO:1000078
name: 5,2prime-O-dimethylcytidylate residue
is_a: RNAO:0000537
relationship: has_functional_parent RNAO:0000102
[Term]
id: RNAO:1000080
name: 2prime-O-methylguanylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000081
name: 1-methylguanine nucleobase
is_a: RNAO:0000477
relationship: has_functional_parent RNAO:0000028
[Term]
id: RNAO:1000082
name: 1-methylguanylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000084
name: N2-methylguanine nucleobase
is_a: RNAO:0000477
relationship: has_functional_parent RNAO:0000028
[Term]
id: RNAO:1000085
name: N2-methylguanylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000086
name: N2,N2-dimethylguanine nucleobase
is_a: RNAO:0000477
relationship: has_functional_parent RNAO:0000028
[Term]
id: RNAO:1000087
name: N2,N2-dimethylguanylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000088
name: N2,N2,2prime-O-trimethylguanosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000089
name: N2,N2,2prime-O-trimethylguanylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000090
name: 7-methylguanine nucleobase
is_a: RNAO:0000477
relationship: has_functional_parent RNAO:0000028
[Term]
id: RNAO:1000091
name: 7-methylguanylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000092
name: N2,7-dimethylguanine nucleobase
is_a: RNAO:0000477
relationship: has_functional_parent RNAO:0000028
[Term]
id: RNAO:1000094
name: N2,7-dimethylguanylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000095
name: N2,N2,7-trimethylguanosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000096
name: N2,N2,7-trimethylguanine nucleobase
is_a: RNAO:0000477
relationship: has_functional_parent RNAO:0000028
[Term]
id: RNAO:1000097
name: N2,N2,7-trimethylguanylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000098
name: 1,2prime-O-dimethylguanosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000099
name: 1,2prime-O-methylguanylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000100
name: N2,2prime-O-dimethylguanosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000101
name: N2,2prime-O-methylguanylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000102
name: 3-methyluracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000103
name: 3-methyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000104
name: 3-methyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000105
name: 5-methyluracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000106
name: 5-methyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000107
name: 5-methyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000108
name: 3,2prime-O-dimethyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000109
name: 3,2prime-O-dimethyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000110
name: 5,2prime-O-dimethyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000111
name: 5,2prime-O-dimethyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000112
name: 2-methylthio-N6-methyladenine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000113
name: 2-methylthio-N6-methyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000114
name: 2-methylthio-N6-methyladenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000115
name: N6-acetyladenine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000116
name: N6-acetyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000117
name: N6-acetyladenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000118
name: 2-thiocytosine nucleobase
is_a: RNAO:0000478
relationship: has_functional_parent RNAO:0000025
[Term]
id: RNAO:1000120
name: 2-thiocytidylate residue
is_a: RNAO:0000537
relationship: has_functional_parent RNAO:0000102
[Term]
id: RNAO:1000121
name: N4-acetylcytosine nucleobase
is_a: RNAO:0000478
relationship: has_functional_parent RNAO:0000025
[Term]
id: RNAO:1000122
name: N4-acetylcytidylate residue
is_a: RNAO:0000537
relationship: has_functional_parent RNAO:0000102
[Term]
id: RNAO:1000123
name: N4-acetyl-2prime-O-methylcytidine residue
is_a: RNAO:0000533
relationship: has_functional_parent RNAO:0000035
[Term]
id: RNAO:1000124
name: N4-acetyl-2prime-O-methylcytidylate residue
is_a: RNAO:0000537
relationship: has_functional_parent RNAO:0000102
[Term]
id: RNAO:1000125
name: 5-formylcytosine nucleobase
is_a: RNAO:0000478
relationship: has_functional_parent RNAO:0000025
[Term]
id: RNAO:1000126
name: 5-formylcytidine residue
is_a: RNAO:0000533
relationship: has_functional_parent RNAO:0000035
[Term]
id: RNAO:1000127
name: 5-formylcytidylate residue
is_a: RNAO:0000537
relationship: has_functional_parent RNAO:0000102
[Term]
id: RNAO:1000128
name: 5-formyl-2prime-O-methylcytidine residue
is_a: RNAO:0000533
relationship: has_functional_parent RNAO:0000035
[Term]
id: RNAO:1000129
name: 5-formyl-2prime-O-methylcytidylate residue
is_a: RNAO:0000537
relationship: has_functional_parent RNAO:0000102
[Term]
id: RNAO:1000130
name: 2-thiouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000131
name: 2-thiouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000132
name: 2-thiouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000133
name: 4-thiouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000135
name: 4-thiouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000136
name: 2-selenouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000137
name: 2-selenouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000138
name: 2-selenouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000139
name: 2-thio-2prime-O-methyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000140
name: 2-thio-2prime-O-methyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000141
name: 5-methyl-2-thiouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000142
name: 5-methyl-2-thiouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000143
name: 5-formyluracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000144
name: 5-formyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000145
name: 5-formyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000146
name: 5-formyl-2prime-O-methyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000147
name: 5-formyl-2prime-O-methyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000148
name: 5-formyl-2-thiouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000149
name: 5-formyl-2-thiouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000150
name: 5-formyl-2-thiouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000151
name: 5-formyl-2-selenouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000152
name: 5-formyl-2-selenouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000153
name: 5-formyl-2-selenouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000154
name: 5-methyl-5,6-dihydrouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000155
name: 5-methyldihydrouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000156
name: 5-methyldihydrouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000157
name: 5-hydroxymethylcytosine nucleobase
is_a: RNAO:0000478
relationship: has_functional_parent RNAO:0000025
[Term]
id: RNAO:1000158
name: 5-hydroxymethylcytidine residue
is_a: RNAO:0000533
relationship: has_functional_parent RNAO:0000035
[Term]
id: RNAO:1000159
name: 5-hydroxymethylcytidylate residue
is_a: RNAO:0000537
relationship: has_functional_parent RNAO:0000102
[Term]
id: RNAO:1000160
name: 5-hydroxyuracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000161
name: 5-hydroxyuridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000162
name: 5-hydroxyuridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000163
name: 5-methoxyuracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000165
name: 5-methoxyuridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000166
name: 5-carboxymethyluracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000167
name: 5-carboxymethyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000168
name: 5-carboxymethyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000169
name: 5-carboxymethyl-2-thiouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000170
name: 5-carboxymethyl-2-thiouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000171
name: 5-carboxymethyl-2-thiouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000172
name: 5-carboxymethylaminomethyluracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000173
name: 5-carboxymethylaminomethyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000174
name: 5-carboxymethylaminomethyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000175
name: 5-carboxymethylaminomethyl-2prime-O-methyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000176
name: 5-carboxymethylaminomethyl-2prime-O-methyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000177
name: 5-carboxymethylaminomethyl-2-thiouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000178
name: 5-carboxymethylaminomethyl-2-thiouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000179
name: 5-carboxymethylaminomethyl-2-selenouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000180
name: 5-carboxymethylaminomethyl-2-selenouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000181
name: 5-carboxymethylaminomethyl-2-selenouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000182
name: 5-aminomethyluracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000183
name: 5-aminomethyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000184
name: 5-aminomethyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000185
name: 5-methylaminomethyl-2-thiouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000186
name: 5-aminomethyl-2-thiouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000187
name: 5-aminomethyl-2-thiouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000188
name: 5-methylaminomethyl-2-thiouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000189
name: 5-aminomethyl-2-thiouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000190
name: 5-methylaminomethyl-2-thiouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000191
name: 5-methylaminomethyluracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000192
name: 5-methylaminomethyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000193
name: 5-methylaminomethyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000195
name: 5-aminomethyl-2-selenouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000196
name: 5-aminomethyl-2-selenouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000197
name: 5-aminomethyl-2-selenouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000198
name: 5-methylaminomethyl-2-selenouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000199
name: 5-methylaminomethyl-2-selenouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000200
name: 5-methylaminomethyl-2-selenouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000201
name: 5-carbamoylmethyluracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000202
name: 5-carbamoylmethyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000203
name: 5-carbamoylmethyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000204
name: 5-carbamoylmethyl-2prime-O-methyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000205
name: 5-carbamoylmethyl-2prime-O-methyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000206
name: N6-threonylcarbamoyladenine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000207
name: N6-threonylcarbamoyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000208
name: N6-threonylcarbamoyladenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000209
name: N6-methyl-N6-threonylcarbamoyladenine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000210
name: N6-methyl-N6-threonylcarbamoyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000211
name: N6-methyl-N6-threonylcarbamoyladenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000212
name: 2-methylthio-N6-threonylcarbamoyladenine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000213
name: 2-methylthio-N6-threonylcarbamoyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000214
name: 2-methylthio-N6-threonylcarbamoyladenosylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000215
name: N6-glycinylcarbamoyladenine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000216
name: N6-glycinylcarbamoyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000217
name: N6-glycinylcarbamoyladenosylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000219
name: pseudouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000220
name: 5-taurinomethyluracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000221
name: 5-taurinomethyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000222
name: 5-taurinomethyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000223
name: 5-taurinomethyl-2-thiouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000224
name: 5-taurinomethyl-2-thiouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000225
name: lysidinylate residue
is_a: RNAO:0000537
relationship: has_functional_parent RNAO:0000102
[Term]
id: RNAO:1000226
name: 5-taurinomethyl-2-thiouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000227
name: lysidine residue
is_a: RNAO:0000533
relationship: has_functional_parent RNAO:0000035
[Term]
id: RNAO:1000228
name: 2prime-O-(5-phosphoribosyl)ribose ring
is_a: RNAO:1000020
[Term]
id: RNAO:1000229
name: 2prime-O-ribosyladenylate phosphate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000230
name: 2prime-O-ribosyladenosine phosphate residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000231
name: 2prime-O-ribosylguanosine phosphate residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000232
name: 2prime-O-ribosylguanylate phosphate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000233
name: N6-isopentenyladenine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000234
name: N6-isopentenyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000235
name: N6-isopentenyladenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000236
name: 2-methylthio-N6-isopentenyladenine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000237
name: 2-methylthio-N6-isopentenyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000238
name: 2prime-O-methylpseudouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000239
name: 3-methylpseudouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000240
name: 3-methylpseudouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000241
name: 1-methyluracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000243
name: 1-methylpseudouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000244
name: 5-methoxycarbonylmethyluracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000245
name: 5-methoxycarbonylmethyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000246
name: 5-methoxycarbonylmethyl-2-thiouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000247
name: 5-methoxycarbonylmethyl-2-thiouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000248
name: 5-methoxycarbonylmethyl-2prime-O-methyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000249
name: 5-methoxycarbonylmethyl-2prime-O-methyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000250
name: 3-(3-amino-3-carboxypropyl)uridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000251
name: 3-(3-amino-3-carboxypropyl)methyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000252
name: 3-(3-amino-3-carboxypropyl)methyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000253
name: 1-methyl-3-(3-amino-3-carboxypropyl)uracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000254
name: 1-methyl-3-(3-amino-3-carboxypropyl)pseudouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000255
name: 1-methyl-3-(3-amino-3-carboxypropyl)pseudouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000256
name: 5-(carboxyhydroxymethyl)uracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000257
name: 5-(carboxyhydroxymethyl)uridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000258
name: uracil 5-oxyaceticacid nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000259
name: uridylate 5-oxyacetic acid residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000260
name: uracil 5-oxyaceticacid methyl ester nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000261
name: uridine 5-oxyacetic acid methyl ester residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000262
name: uridylate 5-oxyacetic acid methyl ester residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000263
name: 5-(carboxyhydroxymethyl)uracil methyl ester nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000264
name: 5-(carboxyhydroxymethyl)uridine methyl ester residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000265
name: 5-(carboxyhydroxymethyl)uridylate methyl ester residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000266
name: N6-(cis-hydroxyisopentenyl)adenine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000267
name: N6-(cis-hydroxyisopentenyl)adenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000268
name: N6-(cis-hydroxyisopentenyl)adenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000269
name: 2-methylthio-N6-(cis-hydroxyisopentenyl)adenine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000270
name: 2-methylthio-N6-(cis-hydroxyisopentenyl)adenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000271
name: 2-methylthio-N6-(cis-hydroxyisopentenyl)adenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000272
name: norvalyl group
is_a: CHEBI:24433
[Term]
id: RNAO:1000273
name: N6-hydroxynorvalylcarbamoyladenine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000274
name: N6-hydroxynorvalylcarbamoyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000275
name: N6-hydroxynorvalylcarbamoyladenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000276
name: 2-methylthio-N6-hydroxynorvalylcarbamoyladenine nucleobase
is_a: RNAO:0000476
relationship: has_functional_parent RNAO:0000027
[Term]
id: RNAO:1000277
name: 2-methylthio-N6-hydroxynorvalylcarbamoyladenosine residue
is_a: RNAO:0000531
relationship: has_functional_parent RNAO:0000037
[Term]
id: RNAO:1000278
name: 2-methylthio-N6-hydroxynorvalylcarbamoyladenylate residue
is_a: RNAO:0000535
relationship: has_functional_parent RNAO:0000104
[Term]
id: RNAO:1000281
name: agmatinyl group
is_a: CHEBI:24433
[Term]
id: RNAO:1000282
name: agmatidinylate residue
is_a: RNAO:0000537
relationship: has_functional_parent RNAO:0000102
[Term]
id: RNAO:1000283
name: agmatidine residue
is_a: RNAO:0000533
relationship: has_functional_parent RNAO:0000035
[Term]
id: RNAO:1000284
name: N2,7,2prime-O-trimethylguanosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000285
name: N2,7,2prime-O-trimethylguanylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000286
name: 5-isopentenylaminomethyluracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000287
name: 5-isopentenylaminomethyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000288
name: 5-isopentenylaminomethyl-2prime-O-methyluridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000289
name: 5-isopentenylaminomethyluridine residue
is_a: RNAO:0000534
[Term]
id: RNAO:1000290
name: 5-isopentenylaminomethyl-2prime-O-methyluridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000291
name: 5-isopentenylaminomethyl-2-thiouracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: RNAO:1000292
name: 5-isopentenylaminomethyl-2-thiouridine residue
is_a: RNAO:0000534
relationship: has_functional_parent RNAO:0000036
[Term]
id: RNAO:1000293
name: 5-isopentenylaminomethyl-2-thiouridylate residue
is_a: RNAO:0000538
relationship: has_functional_parent RNAO:0000103
[Term]
id: RNAO:1000294
name: wyosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000295
name: wyosinylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000296
name: methylwyosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000297
name: imidazopurine C7 atom
is_a: RNAO:0000513
[Term]
id: RNAO:1000298
name: methylwyosinylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000299
name: archaeosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000300
name: carboxamidine group
is_a: CHEBI:24433
[Term]
id: RNAO:1000301
name: 7-deazapurine C7 atom
is_a: CHEBI:27594
[Term]
id: RNAO:1000302
name: archaeosinylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000303
name: 7-cyano-7-deazaguanosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000304
name: 7-cyano-7-deazaguanylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000305
name: 7-aminomethyl-7-deazaguanosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000306
name: 7-aminomethyl-7-deazaguanylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000307
name: preQ1base nucleobase
is_a: RNAO:0000477
relationship: has_functional_parent RNAO:0000028
[Term]
id: RNAO:1000308
name: cyclopentenediolyl group
is_a: CHEBI:24433
[Term]
id: RNAO:1000309
name: Qbase nucleobase
is_a: RNAO:0000477
relationship: has_functional_parent RNAO:0000028
[Term]
id: RNAO:1000310
name: queuosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000311
name: queuosinylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000312
name: mannosyl-Qbase nucleobase
is_a: RNAO:0000477
relationship: has_functional_parent RNAO:0000028
[Term]
id: RNAO:1000313
name: mannosyl-queuosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000314
name: mannosyl-queuosinylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000315
name: galactosyl-Qbase nucleobase
is_a: RNAO:0000477
relationship: has_functional_parent RNAO:0000028
[Term]
id: RNAO:1000316
name: galactosyl-queuosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000317
name: galactosyl-queuosinylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000318
name: glutamyl-Qbase nucleobase
is_a: RNAO:0000477
relationship: has_functional_parent RNAO:0000028
[Term]
id: RNAO:1000319
name: gluQ residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000320
name: gluQylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000321
name: imidazopurine C6 atom
is_a: RNAO:0000513
[Term]
id: RNAO:1000322
name: imidazopurine N4 atom
is_a: CHEBI:29351
[Term]
id: RNAO:1000323
name: 4-demethylwyosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000324
name: 4-demethylwyosinylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000325
name: isowyosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000326
name: isowyosinylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000327
name: undermodified hydroxywybutosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000328
name: undermodified hydroxywybutosinylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000329
name: 10-glutamylwyosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000330
name: 10-glutamylwyosinylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000331
name: 10-glutamyl-4-demethylwyosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000333
name: 10-glutamyl-4-demethylwyosinylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000334
name: 10-glutamylmethylesterwyosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000335
name: 10-glutamylmethylesterwyosinylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000336
name: 2,3-epoxycyclopenta-(4,5-diol)-1-yl group
is_a: CHEBI:24433
[Term]
id: RNAO:1000337
name: epoxy-Qbase nucleobase
is_a: RNAO:0000477
relationship: has_functional_parent RNAO:0000028
[Term]
id: RNAO:1000338
name: epoxyqueuosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000339
name: epoxyqueuosinylate residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000350
name: 7-methylguanosine cap structure
is_a: RNAO:1000022
[Term]
id: RNAO:1000351
name: N2,N2,7-trimethylguanosine cap structure
is_a: RNAO:1000022
[Term]
id: RNAO:1000352
name: gamma-methylphosphate cap structure
is_a: RNAO:1000022
[Term]
id: RNAO:1000353
name: wybutosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000354
name: hydroxywybutosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000355
name: peroxywybutosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: RNAO:1000356
name: wybutosinyl residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000357
name: hydroxywybutosinyl residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:1000358
name: peroxywybutosinyl residue
is_a: RNAO:0000536
relationship: has_functional_parent RNAO:0000105
[Term]
id: RNAO:100249
name: 3-(3-amino-3-carboxypropyl)uracil nucleobase
is_a: RNAO:0000479
relationship: has_functional_parent RNAO:0000026
[Term]
id: CHEBI:26833
name: sulfur atom
is_a: CHEBI:33250
[Term]
id: CHEBI:27568
name: selenium atom
is_a: CHEBI:33250
[Term]
id: RNAO:1000093
name: N2,7-dimethylguanosine residue
is_a: RNAO:0000532
relationship: has_functional_parent RNAO:0000038
[Term]
id: snap#DependentContinuant
[Term]
id: snap#MaterialEntity
[Term]
id: snap#Quality
[Typedef]
id: ObjectProperty1243973897611439000
name: obsolete relation
[Typedef]
id: RNAO:0000191
name: linear RNA backbone of
is_a: RNAO:0000220
inverse_of: RNAO:0000192
domain: RNAO:0000189
[Typedef]
id: RNAO:0000192
name: has linear RNA backbone
is_a: RNAO:0000221
[Typedef]
id: RNAO:0000220
name: RNA backbone of
is_a: RNAO:0000357
domain: RNAO:0000168
[Typedef]
id: RNAO:0000221
name: has RNA backbone
is_a: RNAO:0000358
inverse_of: RNAO:0000220
[Typedef]
id: RNAO:0000222
name: has direct part
is_a: ro.owl#has_proper_part
inverse_of: RNAO:0000223
[Typedef]
id: RNAO:0000223
name: direct part of
is_a: ro.owl#proper_part_of
[Typedef]
id: RNAO:0000300
name: connected to
is_symmetric: true
is_transitive: true
[Typedef]
id: RNAO:0000301
name: covalently connected to (transitive)
is_a: RNAO:0000300
is_transitive: true
range: RNAO:0000158
domain: RNAO:0000158
[Typedef]
id: RNAO:0000302
name: covalently bonded to (transitive)
is_a: RNAO:0000301
is_transitive: true
range: CHEBI:33250
domain: CHEBI:33250
[Typedef]
id: RNAO:0000303
name: covalently bonded to
is_a: RNAO:0000302
is_symmetric: true
range: CHEBI:33250
domain: CHEBI:33250
[Typedef]
id: RNAO:0000304
name: covalently connected to
is_a: RNAO:0000301
is_symmetric: true
[Typedef]
id: RNAO:0000305
name: backbone connected to
is_a: RNAO:0000304
range: RNAO:0000187
domain: RNAO:0000187
[Typedef]
id: RNAO:0000306
name: covalently connected 5prime to 5prime
is_a: RNAO:0000305
is_functional: true
is_symmetric: true
[Typedef]
id: RNAO:0000307
name: covalently connected 5prime to 3prime
is_a: RNAO:0000305
is_functional: true
[Typedef]
id: RNAO:0000308
name: covalently connected 5prime to 2prime
is_a: RNAO:0000305
inverse_of: RNAO:0000312
is_functional: true
[Typedef]
id: RNAO:0000309
name: covalently connected 3prime to 5prime
is_a: RNAO:0000305
inverse_of: RNAO:0000307
is_functional: true
[Typedef]
id: RNAO:0000310
name: covalently connected 3prime to 3prime
is_a: RNAO:0000305
is_functional: true
is_symmetric: true
[Typedef]
id: RNAO:0000311
name: covalently connected 3prime to 2prime
is_a: RNAO:0000305
is_functional: true
[Typedef]
id: RNAO:0000312
name: covalently connected 2prime to 5prime
is_a: RNAO:0000305
is_functional: true
[Typedef]
id: RNAO:0000313
name: covalently connected 2prime to 3prime
is_a: RNAO:0000305
inverse_of: RNAO:0000311
is_functional: true
[Typedef]
id: RNAO:0000315
name: weakly interacting with (transitive)
is_a: RNAO:0000300
is_symmetric: true
is_transitive: true
[Typedef]
id: RNAO:0000316
name: weakly interacting with
is_a: RNAO:0000315
is_symmetric: true
[Typedef]
id: RNAO:0000317
name: pairs with
is_a: RNAO:0000316
domain: RNAO:0000020
[Typedef]
id: RNAO:0000318
name: stacks with
is_a: RNAO:0000316
is_symmetric: true
range: RNAO:0000187
domain: RNAO:0000187
[Typedef]
id: RNAO:0000319
name: stacks 5prime face to 5prime face
is_a: RNAO:0000318
is_symmetric: true
[Typedef]
id: RNAO:0000320
name: stacks 5prime face to 3prime face
is_a: RNAO:0000318
inverse_of: RNAO:0000321
[Typedef]
id: RNAO:0000321
name: stacks 3prime face to 5prime face
is_a: RNAO:0000318
[Typedef]
id: RNAO:0000322
name: stacks 3prime face to 3prime face
is_a: RNAO:0000318
is_symmetric: true
[Typedef]
id: RNAO:0000323
name: pairs with HH
is_a: RNAO:0000317
is_functional: true
[Typedef]
id: RNAO:0000324
name: pairs with CHH
is_a: RNAO:0000323
is_functional: true
[Typedef]
id: RNAO:0000325
name: pairs with THH
is_a: RNAO:0000323
is_functional: true
[Typedef]
id: RNAO:0000326
name: pairs with HS
is_a: RNAO:0000317
is_functional: true
[Typedef]
id: RNAO:0000327
name: pairs with CHS
is_a: RNAO:0000326
is_functional: true
[Typedef]
id: RNAO:0000328
name: pairs with THS
is_a: RNAO:0000326
is_functional: true
[Typedef]
id: RNAO:0000329
name: pairs with HW
is_a: RNAO:0000317
inverse_of: RNAO:0000341
is_functional: true
[Typedef]
id: RNAO:0000330
name: pairs with CHW
is_a: RNAO:0000329
is_functional: true
[Typedef]
id: RNAO:0000331
name: pairs with THW
is_a: RNAO:0000329
is_functional: true
[Typedef]
id: RNAO:0000332
name: pairs with SH
is_a: RNAO:0000317
is_functional: true
[Typedef]
id: RNAO:0000333
name: pairs with CSH
is_a: RNAO:0000332
inverse_of: RNAO:0000327
is_functional: true
[Typedef]
id: RNAO:0000334
name: pairs with TSH
is_a: RNAO:0000332
inverse_of: RNAO:0000328
is_functional: true
[Typedef]
id: RNAO:0000335
name: pairs with SS
is_a: RNAO:0000317
is_functional: true
[Typedef]
id: RNAO:0000336
name: pairs with CSS
is_a: RNAO:0000335
is_functional: true
[Typedef]
id: RNAO:0000337
name: pairs with TSS
is_a: RNAO:0000335
is_functional: true
[Typedef]
id: RNAO:0000338
name: pairs with SW
is_a: RNAO:0000317
is_functional: true
[Typedef]
id: RNAO:0000339
name: pairs with CSW
is_a: RNAO:0000338
is_functional: true
[Typedef]
id: RNAO:0000340
name: pairs with TSW
is_a: RNAO:0000338
inverse_of: RNAO:0000346
is_functional: true
[Typedef]
id: RNAO:0000341
name: pairs with WH
is_a: RNAO:0000317
is_functional: true
[Typedef]
id: RNAO:0000342
name: pairs with CWH
is_a: RNAO:0000341
inverse_of: RNAO:0000330
is_functional: true
[Typedef]
id: RNAO:0000343
name: pairs with TWH
is_a: RNAO:0000341
inverse_of: RNAO:0000331
is_functional: true
[Typedef]
id: RNAO:0000344
name: pairs with WS
is_a: RNAO:0000317
is_functional: true
[Typedef]
id: RNAO:0000345
name: pairs with CWS
is_a: RNAO:0000344
inverse_of: RNAO:0000339
is_functional: true
[Typedef]
id: RNAO:0000346
name: pairs with TWS
is_a: RNAO:0000344
is_functional: true
[Typedef]
id: RNAO:0000347
name: pairs with WW
is_a: RNAO:0000317
is_functional: true
[Typedef]
id: RNAO:0000348
name: pairs with CWW
is_a: RNAO:0000347
is_functional: true
is_symmetric: true
[Typedef]
id: RNAO:0000349
name: pairs with TWW
is_a: RNAO:0000347
is_functional: true
is_symmetric: true
[Typedef]
id: RNAO:0000350
name: boundary of
[Typedef]
id: RNAO:0000351
name: external boundary of
is_a: RNAO:0000350
[Typedef]
id: RNAO:0000352
name: has boundary
inverse_of: RNAO:0000350
[Typedef]
id: RNAO:0000353
name: has external boundary
is_a: RNAO:0000352
inverse_of: RNAO:0000351
[Typedef]
id: RNAO:0000354
name: has member
is_a: ro.owl#has_part
[Typedef]
id: RNAO:0000355
name: member of
is_a: ro.owl#part_of
inverse_of: RNAO:0000354
[Typedef]
id: RNAO:0000356
name: subcollection of
is_a: ro.owl#part_of
inverse_of: RNAO:0000359
[Typedef]
id: RNAO:0000357
name: submolecule of
is_a: ro.owl#part_of
inverse_of: RNAO:0000358
domain: RNAO:0000181
[Typedef]
id: RNAO:0000358
name: has submolecule
is_a: ro.owl#has_part
[Typedef]
id: RNAO:0000359
name: has subcollection
is_a: ro.owl#has_part
[Typedef]
id: RNAO:0000360
name: overlaps
[Typedef]
id: RNAO:0000361
name: covalently bonded sum of
[Typedef]
id: RNAO:0000362
name: same chain
is_symmetric: true
is_transitive: true
[Typedef]
id: RNAO:0000363
name: corresponds to
is_symmetric: true
is_transitive: true
[Typedef]
id: RNAO:0000364
name: corresponds to, nucleotide by nucleotide
is_a: RNAO:0000363
is_symmetric: true
[Typedef]
id: RNAO:0000365
name: suite of
is_a: RNAO:0000357
inverse_of: RNAO:0000366
[Typedef]
id: RNAO:0000366
name: has suite
is_a: RNAO:0000358
[Typedef]
id: RNAO:0000367
name: has face
is_a: RNAO:0000352
[Typedef]
id: RNAO:0000368
name: face of
is_a: RNAO:0000350
inverse_of: RNAO:0000367
is_functional: true
range: RNAO:0000187
domain: RNAO:0000183
[Typedef]
id: RNAO:0000369
name: 5prime face of
is_a: RNAO:0000368
inverse_of: RNAO:0000371
is_functional: true
domain: RNAO:0000184
[Typedef]
id: RNAO:0000370
name: 3prime face of
is_a: RNAO:0000368
inverse_of: RNAO:0000372
is_functional: true
domain: RNAO:0000185
[Typedef]
id: RNAO:0000371
name: has 5prime face
is_a: RNAO:0000367
is_functional: true
[Typedef]
id: RNAO:0000372
name: has 3prime face
is_a: RNAO:0000367
is_functional: true
[Typedef]
id: RNAO:0000373
name: has edge
is_a: RNAO:0000352
[Typedef]
id: RNAO:0000374
name: edge of
is_a: RNAO:0000350
inverse_of: RNAO:0000373
is_functional: true
range: RNAO:0000187
domain: RNAO:0000091
[Typedef]
id: RNAO:0000375
name: has sugar edge
is_a: RNAO:0000373
is_functional: true
[Typedef]
id: RNAO:0000376
name: has Hoogsteen edge
is_a: RNAO:0000373
is_functional: true
[Typedef]
id: RNAO:0000377
name: has Watson-Crick edge
is_a: RNAO:0000373
is_functional: true
[Typedef]
id: RNAO:0000378
name: is Hoogsteen edge of
is_a: RNAO:0000374
inverse_of: RNAO:0000376
is_functional: true
domain: RNAO:0000093
[Typedef]
id: RNAO:0000379
name: is sugar edge of
is_a: RNAO:0000374
inverse_of: RNAO:0000375
is_functional: true
domain: RNAO:0000094
[Typedef]
id: RNAO:0000380
name: is Watson-Crick edge of
is_a: RNAO:0000374
inverse_of: RNAO:0000377
is_functional: true
domain: RNAO:0000092
[Typedef]
id: RNAO:0000381
name: sum of collection
range: RNAO:0000110
domain: snap#MaterialEntity
[Typedef]
id: RNAO:0000382
name: covalently connected 5prime to 3prime (transitive)
is_a: ObjectProperty1243973897611439000
is_transitive: true
[Typedef]
id: RNAO:0000383
name: covalently connected 3prime to 5prime (transitive)
is_a: ObjectProperty1243973897611439000
is_transitive: true
[Typedef]
id: RNAO:0000459
name: hydrogen bonds with
is_a: RNAO:0000316
is_symmetric: true
range: CHEBI:33250
domain: CHEBI:33250
[Typedef]
id: RNAO_isosteric_with
is_a: ObjectProperty1243973897611439000
is_symmetric: true
[Typedef]
id: RNAO_near_isosteric_with
is_a: ObjectProperty1243973897611439000
is_symmetric: true
[Typedef]
id: has_functional_parent
name: has functional parent
is_a: owl#topObjectProperty
[Typedef]
id: interacts_with_0BPh
is_a: interacts_with_HPh
domain: RNAO:0000020
[Typedef]
id: interacts_with_1BPh
is_a: ObjectProperty1243973897611439000
range: RNAO:0000018
domain: RNAO:0000105
[Typedef]
id: interacts_with_2BPh
is_a: ObjectProperty1243973897611439000
range: RNAO:0000018
domain: RNAO:0000104
[Typedef]
id: interacts_with_3BPh
is_a: interacts_with_WPh
range: RNAO:0000018
domain: RNAO:0000105
[Typedef]
id: interacts_with_4BPh
is_a: interacts_with_WPh
range: RNAO:0000018
domain: RNAO:0000105
[Typedef]
id: interacts_with_5BPh
is_a: interacts_with_WPh
range: RNAO:0000018
[Typedef]
id: interacts_with_6BPh
is_a: interacts_with_WPh
range: RNAO:0000018
[Typedef]
id: interacts_with_7BPh
is_a: interacts_with_HPh
range: RNAO:0000018
[Typedef]
id: interacts_with_8BPh
is_a: interacts_with_HPh
range: RNAO:0000018
domain: RNAO:0000102
[Typedef]
id: interacts_with_9BPh
is_a: interacts_with_HPh
range: RNAO:0000018
domain: RNAO:0000101
[Typedef]
id: interacts_with_HPh
is_a: ObjectProperty1243973897611439000
range: RNAO:0000018
domain: RNAO:0000020
[Typedef]
id: interacts_with_WPh
is_a: ObjectProperty1243973897611439000
range: RNAO:0000018
domain: RNAO:0000020
[Typedef]
id: ro.owl#has_part
[Typedef]
id: ro.owl#has_proper_part
[Typedef]
id: ro.owl#has_quality
name: has quality
[Typedef]
id: ro.owl#part_of
[Typedef]
id: ro.owl#proper_part_of
[Typedef]
id: owl#topObjectProperty