format-version: 1.2 date: 27:11:2012 1:11 saved-by: Bgee team default-namespace: vertebrates_homologous_organs_groups namespace-id-rule: * VHOG:$sequence(7,0,9999999)$ treat-xrefs-as-equivalent: CARO treat-xrefs-as-genus-differentia: TAO remark: version 1.6 remark: IMPORTANT: The association file mapping anatomical structures of species-specific ontologies to the homologous organs groups is located at http://bgee.unil.ch/download/organ_association_vHOG.txt remark: see the documentation section of the Bgee website (http://bgee.unil.ch) for informations [Term] id: VHOG:0000005 name: brain ventricular system def: "The cerebrospinal fluid-filled spaces inside the brain." [ISBN:978-0781760034 "p.815"] xref: TAO:0001261 is_a: VHOG:0001725 ! anatomical system relationship: part_of VHOG:0000293 ! central nervous system [Term] id: VHOG:0000006 name: fourth ventricle def: "Fluid-filled brain cavity." [ZFA:0000110] synonym: "4th ventricle" RELATED [] synonym: "hindbrain ventricle" RELATED [] synonym: "IVth ventricle" RELATED [] synonym: "rhombencephalic ventricle" RELATED [] synonym: "rhombencephalic vesicle" RELATED [] synonym: "ventricle IV" RELATED [] xref: TAO:0000110 is_a: VHOG:0001728 ! anatomical space relationship: part_of VHOG:0000005 ! brain ventricular system relationship: part_of VHOG:0000070 ! hindbrain [Term] id: VHOG:0000007 name: third ventricle def: "Fluid-filled brain cavity." [ZFA:0000161] synonym: "3rd ventricle" RELATED [] synonym: "diencephalic ventricle" RELATED [] synonym: "diencephalic vesicle" RELATED [] synonym: "ventriculus diencephali" RELATED [] xref: TAO:0000161 is_a: VHOG:0001728 ! anatomical space relationship: part_of VHOG:0000005 ! brain ventricular system relationship: part_of VHOG:0000318 ! diencephalon [Term] id: VHOG:0000009 name: diencephalon meninges def: "Meninges that are part of the diencephalon." [Bgee:curator "Bgee"] is_a: VHOG:0001295 ! meninx relationship: part_of VHOG:0000318 ! diencephalon [Term] id: VHOG:0000010 name: telencephalon meninges def: "Meninges that are part of the telencephalon." [Bgee:curator "Bgee"] is_a: VHOG:0001295 ! meninx relationship: part_of VHOG:0000283 ! telencephalon [Term] id: VHOG:0000011 name: hindbrain meninges def: "Meninges that are part of the hindbrain." [Bgee:curator "Bgee"] synonym: "rhomencephalon meninges" RELATED [] is_a: VHOG:0000013 ! brain meninges relationship: part_of VHOG:0000070 ! hindbrain [Term] id: VHOG:0000012 name: midbrain meninges def: "Meninges that are part of the midbrain." [Bgee:curator "Bgee"] synonym: "mesencephalon meninges" RELATED [] is_a: VHOG:0000013 ! brain meninges relationship: part_of VHOG:0000069 ! midbrain [Term] id: VHOG:0000013 name: brain meninges def: "Meninges that are part of the brain." [Bgee:curator "Bgee"] is_a: VHOG:0001295 ! meninx relationship: part_of VHOG:0000157 ! brain [Term] id: VHOG:0000014 name: extraembryonic vitelline vein is_a: VHOG:0001743 ! vein relationship: part_of VHOG:0000282 ! extraembryonic venous system [Term] id: VHOG:0000015 name: extraembryonic umbilical vein def: "Extraembryonic part of the vein passing through the umbilical cord to the fetus and returning the purified and nutrient blood from the placenta." [ISBN:978-0828893114] is_a: VHOG:0001743 ! vein relationship: part_of VHOG:0000282 ! extraembryonic venous system relationship: part_of VHOG:0000726 ! female reproductive system [Term] id: VHOG:0000017 name: nasal septum def: "A median dividing wall, sagitally directed, which divides the nasal cavity into the right and the left nasal fossae." [ISBN:978-0828893114] is_a: VHOG:0000287 ! olfactory organ [Term] id: VHOG:0000018 name: urorectal septum def: "A ridge of mesoderm covered with endoderm that in the early developing embryo divides the endodermal cloaca into the urogenital sinus and the rectum." [http://medical-dictionary.thefreedictionary.com/urorectal+septum] synonym: "cloacal septum" RELATED [] is_a: VHOG:0001757 ! portion of tissue relationship: part_of VHOG:0000286 ! urogenital system [Term] id: VHOG:0000019 name: septum transversum def: "A thick plate of mesodermal tissue that occupies the space between the thoracic cavity and yolk stalk in the early embryo, forming a transverse partition partially separating the coelomic cavity into thoracic and abdominal portions. It gives rise to the central tendon of the diaphragm." [http://medical-dictionary.thefreedictionary.com/transverse+septum] is_a: VHOG:0001757 ! portion of tissue relationship: part_of VHOG:0000170 ! mesenchyme [Term] id: VHOG:0000020 name: septum primum def: "The first of the two membranous sheets which partially separate the two atria during embryonic development." [http://medical-dictionary.thefreedictionary.com/interatrial+septum+primum "adapted from"] is_a: VHOG:0000385 ! interatrial septum [Term] id: VHOG:0000021 name: septum secundum def: "The second of the two membranous sheets which partially separate the two atria during embryonic development." [http://medical-dictionary.thefreedictionary.com/interatrial+septum+secundum "adapted from"] is_a: VHOG:0000385 ! interatrial septum [Term] id: VHOG:0000022 name: prosencephalon lateral wall def: "Lateral wall that is part of the prosencephalon." [Bgee:curator "Bgee"] relationship: part_of VHOG:0000383 ! forebrain [Term] id: VHOG:0000023 name: telencephalon lateral wall def: "Lateral wall that is part of the telencephalon." [Bgee:curator "Bgee"] xref: TAO:0000785 relationship: part_of VHOG:0000283 ! telencephalon [Term] id: VHOG:0000024 name: cerebellum def: "Specialized brain region derived from the dorsal metencephalon (anterior hindbrain, and perhaps including posterior midbrain)." [ZFA:0000100 "adapted from"] xref: TAO:0000100 xref: TAO:0001440 relationship: part_of VHOG:0000070 ! hindbrain [Term] id: VHOG:0000033 name: olfactory bulb def: "The part of the forebrain in which the olfactory nerves end and the olfactory tracts originate." [ISBN:978-0828893114] xref: TAO:0000402 relationship: part_of VHOG:0000833 ! olfactory lobe relationship: part_of VHOG:0001674 ! sensory system [Term] id: VHOG:0000037 name: pronephros def: "A kidney formed of nephric tubules arising in the anterior region of the nephric ridge; forms only as a transient embryonic structure." [ISBN:978-0072528305 "Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.748"] synonym: "pronephric kidney" RELATED [] xref: TAO:0000151 is_a: VHOG:0001730 ! cavitated compound organ relationship: part_of VHOG:0000316 ! intraembryonic coelom relationship: part_of VHOG:0000723 ! renal system [Term] id: VHOG:0000038 name: mesonephros def: "A kidney formed of nephric tubules arising in the middle region of the nephric ridge; a transient embryonic stage that replaces the pronephros, but is itself replaced by the adult metanephros (in mammals; in fishes and amphibians it is the adult kidney)." [ISBN:978-0072528305 "Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.745"] synonym: "mesonephric kidney" RELATED [] xref: TAO:0000529 is_a: VHOG:0001730 ! cavitated compound organ relationship: part_of VHOG:0000316 ! intraembryonic coelom relationship: part_of VHOG:0000723 ! renal system relationship: part_of VHOG:0001247 ! immune system [Term] id: VHOG:0000039 name: metanephros def: "A kidney formed of nephric tubules arising in the posterior region of the nephric ridge and drained by a ureter; replaces the embryonic pronephros and mesonephros (in mammals)." [ISBN:978-0072528305 "Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.745"] synonym: "metanephric kidney" RELATED [] is_a: VHOG:0001730 ! cavitated compound organ relationship: part_of VHOG:0000723 ! renal system [Term] id: VHOG:0000048 name: exocrine pancreas def: "The part of the pancreas that acts as an exocrine gland, consisting of the pancreatic acini, which produce pancreatic juice and secrete it into the intestine to aid in protein digestion." [http://medical-dictionary.thefreedictionary.com/pancreas] xref: TAO:0001249 relationship: part_of VHOG:0000050 ! pancreas [Term] id: VHOG:0000049 name: endocrine pancreas def: "The part of the pancreas that acts as an endocrine gland, consisting of the islets of Langerhans, which secrete insulin and other hormones." [http://medical-dictionary.thefreedictionary.com/pancreas] xref: TAO:0001260 relationship: part_of VHOG:0000050 ! pancreas [Term] id: VHOG:0000050 name: pancreas xref: TAO:0000140 xref: TAO:0000254 is_a: VHOG:0001723 ! compound organ relationship: part_of VHOG:0000098 ! endocrine system relationship: part_of VHOG:0000316 ! intraembryonic coelom relationship: part_of VHOG:0000412 ! alimentary system [Term] id: VHOG:0000051 name: pineal gland synonym: "corpus pineale" RELATED [] synonym: "epiphysis" RELATED [] synonym: "epiphysis cerebri" RELATED [] synonym: "frontal organ" RELATED [] synonym: "pineal organ" RELATED [] xref: TAO:0000019 is_a: VHOG:0000653 ! diencephalon gland relationship: part_of VHOG:0000098 ! endocrine system relationship: part_of VHOG:0000178 ! epithalamus relationship: part_of VHOG:0001674 ! sensory system [Term] id: VHOG:0000052 name: duodenum def: "The fixed portion of the small intestine deeply lodged in the posterior wall of the abdomen and extending from the pylorus to the beginning of the jejunum." [ISBN:978-0828893114] relationship: part_of VHOG:0000055 ! small intestine relationship: part_of VHOG:0000285 ! foregut relationship: part_of VHOG:0000290 ! midgut relationship: part_of VHOG:0000291 ! foregut-midgut junction [Term] id: VHOG:0000053 name: jejunum def: "The first two fifth of the small intestine beyond the duodenum. It extends from the end of the duodenum to the ileum." [ISBN:978-0828893114] relationship: part_of VHOG:0000055 ! small intestine relationship: part_of VHOG:0000290 ! midgut [Term] id: VHOG:0000054 name: large intestine relationship: part_of VHOG:0000056 ! intestine [Term] id: VHOG:0000055 name: small intestine relationship: part_of VHOG:0000056 ! intestine [Term] id: VHOG:0000056 name: intestine def: "The tract of the alimentary canal." [ISBN:978-0828893114] xref: TAO:0001338 is_a: VHOG:0001730 ! cavitated compound organ relationship: part_of VHOG:0000309 ! gut [Term] id: VHOG:0000057 name: neural crest def: "A group of embryonic cells that loosen and separate from the neural plate and surrounding epidermis during neurulation and migrate to give several different lineages of adult cells." [XAO:0000048] synonym: "neural crest material" RELATED [] xref: TAO:0000045 is_a: VHOG:0000150 ! neuroectoderm [Term] id: VHOG:0000062 name: trunk neural crest def: "Trunk portion of the neural crest." [XAO:0000319] synonym: "trunk crest" RELATED [] xref: TAO:0001024 is_a: VHOG:0000057 ! neural crest [Term] id: VHOG:0000063 name: cranial neural crest def: "Neural crest that is part of the head." [ZFA:0001194] synonym: "head crest" RELATED [] xref: TAO:0001194 is_a: VHOG:0000057 ! neural crest relationship: part_of VHOG:0000157 ! brain [Term] id: VHOG:0000068 name: neural plate def: "The earliest recognizable dorsal ectodermal primordium of the central nervous system; consists of a thickened pseudostratified epithelium." [ZFA:0000132 "adapted from"] xref: TAO:0000063 xref: TAO:0000132 is_a: VHOG:0000150 ! neuroectoderm [Term] id: VHOG:0000069 name: midbrain def: "The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally." [ZFA:0000128] synonym: "mesencephalon" RELATED [] xref: TAO:0000128 xref: TAO:0000148 relationship: part_of VHOG:0000157 ! brain relationship: part_of VHOG:0001200 ! anterior neural plate [Term] id: VHOG:0000070 name: hindbrain def: "The most posterior of the three principal regions of the brain." [ZFA:0000029] synonym: "rhombencephalon" RELATED [] xref: TAO:0000029 xref: TAO:0000569 relationship: part_of VHOG:0000157 ! brain relationship: part_of VHOG:0001201 ! posterior neural plate [Term] id: VHOG:0000076 name: cranial ganglion def: "Ganglion which is located in the head." [ZFA:0000013] synonym: "cranial ganglia" RELATED [] xref: TAO:0000013 is_a: VHOG:0000156 ! ganglion relationship: part_of VHOG:0001644 ! head [Term] id: VHOG:0000077 name: epidermis def: "The outer epithelial layer of the external integument of the body that is derived from the embryonic epiblast." [XAO:0000028] synonym: "skin" RELATED [] xref: TAO:0000105 is_a: VHOG:0000387 ! epithelium relationship: part_of VHOG:0000860 ! skin [Term] id: VHOG:0000081 name: hypochord def: "A transient rod-like structure which is endodermally derived and located immediately ventral to the notochord. The hypochord is thought to play a role in positioning the dorsal aorta." [ZFA:0000031] synonym: "subnotochordal rod" RELATED [] xref: TAO:0000031 xref: TAO:0001217 relationship: part_of VHOG:0000154 ! embryonic endoderm [Term] id: VHOG:0000082 name: archinephric duct def: "The first-formed kidney duct, which drains the kidney of most anamniotes and becomes the ductus deferens of male amniotes." [ISBN:978-0030223693 "Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) Glossary G-3"] synonym: "mesonephric duct" RELATED [] synonym: "nephric duct" RELATED [] synonym: "pronephric duct" RELATED [] synonym: "Wolffian duct" RELATED [] xref: TAO:0000150 xref: TAO:0000546 relationship: part_of VHOG:0000037 ! pronephros relationship: part_of VHOG:0000725 ! male reproductive system relationship: part_of VHOG:0000726 ! female reproductive system [Term] id: VHOG:0000083 name: heart myocardium def: "Robust muscular tunic of the heart which forms the basic part of its walls. Its external surface is covered by the pericardium and its internal one by the endocardium." [ISBN:978-0828893114] synonym: "cardiac muscle" RELATED [] xref: TAO:0001319 is_a: VHOG:0001245 ! muscle relationship: part_of VHOG:0000276 ! heart [Term] id: VHOG:0000084 name: heart endocardium def: "Layer that lines the lumen of the heart." [ZFA:0001320] synonym: "heart endocardial tissue" RELATED [] xref: TAO:0001320 is_a: VHOG:0001217 ! cardiovascular system endothelium relationship: part_of VHOG:0000276 ! heart [Term] id: VHOG:0000085 name: blood island relationship: part_of VHOG:0000830 ! yolk sac [Term] id: VHOG:0000086 name: prechordal plate def: "Axial mesoderm that lies anterior to the notochord and that underlies the forebrain." [DOI:10.1046/j.1525-142x.2000.00073.x] synonym: "head mesenchyme" RELATED [] synonym: "head mesoderm" RELATED [] xref: TAO:0000060 relationship: part_of VHOG:0000107 ! axial mesoderm relationship: part_of VHOG:0000170 ! mesenchyme [Term] id: VHOG:0000087 name: intermediate mesoderm synonym: "IM" RELATED [] xref: TAO:0001206 relationship: part_of VHOG:0000152 ! embryonic mesoderm [Term] id: VHOG:0000088 name: ciliary marginal zone def: "Region at the periphery of the retina where retinal stem cells are located." [ZFA:0001289] synonym: "circumferential germinal zone" RELATED [] synonym: "CMZ" RELATED [] xref: TAO:0001289 relationship: part_of VHOG:0000229 ! retina [Term] id: VHOG:0000098 name: endocrine system def: "Anatomical system that consists of the glands and parts of glands that produce endocrine secretions and help to integrate and control bodily metabolic activity." [XAO:0000158] xref: TAO:0001158 is_a: VHOG:0001725 ! anatomical system [Term] id: VHOG:0000101 name: iris def: "The opaque muscular contractile diaphragm suspended in the aqueous humour in front of the lens of the eye. The organ is perforated by the pupil and continues peripherally with the ciliary body." [ISBN:978-0828893114] xref: TAO:0001238 relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0000102 name: ciliary body def: "Multi-tissue structure that is comprised of the smooth muscle fibers and suspensory ligaments that attach the lens to the eye." [ZFA:0001203] synonym: "ciliary bodies" RELATED [] xref: TAO:0001203 is_a: VHOG:0001762 ! multi-tissue structure relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0000103 name: dorsolateral placode xref: TAO:0001310 relationship: part_of VHOG:0000153 ! embryonic ectoderm [Term] id: VHOG:0000107 name: axial mesoderm def: "The portion of the mesoderm underlying the midline of the embryo." [ISBN:978-0879697075 "Glossary XV"] xref: TAO:0001204 relationship: part_of VHOG:0000152 ! embryonic mesoderm [Term] id: VHOG:0000108 name: dermis def: "A collagenous layer of the skin subjacent to the epidermis and covering the hypodermis." [Bgee:curator "Bgee"] xref: TAO:0001119 relationship: part_of VHOG:0000860 ! skin [Term] id: VHOG:0000109 name: trigeminal placode def: "The ectodermal rudiment of the trigeminal ganglion." [ZFA:0000162] xref: TAO:0000162 is_a: VHOG:0000103 ! dorsolateral placode [Term] id: VHOG:0000111 name: posterior cardinal vein def: "Vein that returns blood from the trunk and joins with the anterior cardinal as the common cardinal vein." [Bgee:curator "Bgee"] xref: TAO:0000477 is_a: VHOG:0001197 ! cardinal vein [Term] id: VHOG:0000112 name: common cardinal vein def: "Bilaterally paired longitudinal vein; the anterior cardinal returns blood from the head, and the posterior cardinal returns it from the trunk; these two vessels join together on each side as the common cardinal vein (duct of Cuvier; misnamed the vitelline vein) that leads to the heart's sinus venosus." [ZFA:0000186 "adapted from"] synonym: "duct of Cuvier" RELATED [] xref: TAO:0000186 is_a: VHOG:0001197 ! cardinal vein [Term] id: VHOG:0000113 name: anterior cardinal vein def: "Vein that returns blood from the head and joins with the posterior cardinal as the common cardinal vein." [Bgee:curator "Bgee"] xref: TAO:0000423 is_a: VHOG:0001197 ! cardinal vein [Term] id: VHOG:0000114 name: paraxial mesoderm def: "Area of mesoderm at either side of the midline embryonic notochord that, on segmentation, forms the paired somites." [XAO:0000259] synonym: "paraxial mesenchyme" RELATED [] xref: TAO:0000255 xref: TAO:0000591 relationship: part_of VHOG:0000152 ! embryonic mesoderm [Term] id: VHOG:0000116 name: pupil def: "The circular orifice in the centre of the iris, through which light enters into the eye." [ISBN:978-0828893114] xref: TAO:0001283 relationship: part_of VHOG:0000101 ! iris [Term] id: VHOG:0000117 name: epibranchial placode def: "Focal thickenings of the embryonic ectoderm that form immediately dorsal and caudal of the clefts between the pharyngeal arches and that produce the neuroblasts that migrate and condense to form the distal cranial ganglia." [DOI:10.1046/j.1469-7580.2001.19910133.x "Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"] xref: TAO:0001294 relationship: part_of VHOG:0000153 ! embryonic ectoderm relationship: part_of VHOG:0000399 ! peripheral nervous system [Term] id: VHOG:0000118 name: lateral plate mesoderm def: "The portion of the mesoderm of the trunk of vertebrate embryos lying lateral to the intermediate mesoderm. (...) (It) subdivides into two plates: one dorsal, called the somatopleure, and one ventral, called the splanchnopleure." [ISBN:978-0879697075 "Glossary XV"] xref: TAO:0000121 relationship: part_of VHOG:0000152 ! embryonic mesoderm [Term] id: VHOG:0000119 name: heart epicardium def: "External layer of the heart." [ZFA:0005057] synonym: "visceral serous pericardium" RELATED [] xref: TAO:0005057 relationship: part_of VHOG:0000276 ! heart [Term] id: VHOG:0000120 name: spleen xref: TAO:0000436 is_a: VHOG:0001723 ! compound organ relationship: part_of VHOG:0000316 ! intraembryonic coelom relationship: part_of VHOG:0000352 ! dorsal mesogastrium relationship: part_of VHOG:0000842 ! lymphatic system relationship: part_of VHOG:0001247 ! immune system relationship: part_of VHOG:0001624 ! hematopoietic system [Term] id: VHOG:0000121 name: ventral aorta def: "Outflow artery from the heart to the aortic arches." [ZFA:0000604] xref: TAO:0000604 is_a: VHOG:0001523 ! aorta [Term] id: VHOG:0000122 name: aortic arch def: "Paired vessels arching from the ventral to the dorsal aorta through the pharyngeal arches." [http://medical-dictionary.thefreedictionary.com/aortic+arches "adapted from"] synonym: "pharyngeal arch artery" RELATED [] xref: TAO:0005004 is_a: VHOG:0001251 ! artery relationship: part_of VHOG:0000155 ! pharyngeal arch [Term] id: VHOG:0000128 name: supraorbital lateral line def: "The lateral line that is located above the eye." [ISBN:978-0471210054 "Butler AB and Hodos W, Comparative vertebrate neuroanatomy: Evolution and Adaptation (2005) p.33-34"] xref: TAO:0000443 relationship: part_of VHOG:0001243 ! lateral line system [Term] id: VHOG:0000130 name: taste bud def: "One of a number of receptor cell nests located in the epithelium of the papillae of the tongue and in the soft palate, epiglottis, and pharynx that mediate the sense of taste." [http://medical-dictionary.thefreedictionary.com/taste+bud "adapted from"] xref: TAO:0001074 relationship: part_of VHOG:0000419 ! tongue [Term] id: VHOG:0000131 name: occipital lateral line synonym: "supratemporal lateral line" RELATED [] xref: TAO:0000400 relationship: part_of VHOG:0001243 ! lateral line system [Term] id: VHOG:0000132 name: infraorbital lateral line def: "The lateral line that is located below the eye." [ISBN:978-0471210054 "Butler AB and Hodos W, Comparative vertebrate neuroanatomy: Evolution and Adaptation (2005) p.33-34"] xref: TAO:0000524 relationship: part_of VHOG:0001243 ! lateral line system [Term] id: VHOG:0000133 name: middle lateral line xref: TAO:0000344 relationship: part_of VHOG:0001243 ! lateral line system [Term] id: VHOG:0000135 name: xanthophore def: "A pigment cell derived from the neural crest. Contains carotenoid pigments in structures called pterinosomes or xanthosomes. This gives an appearance ranging from a golden yellow to orange and red." [ZFA:0009198] xref: TAO:0009198 is_a: VHOG:0001678 ! pigment cell [Term] id: VHOG:0000139 name: proctodeum def: "An inward fold on the surface of the embryonic ectoderm that develops into part of the anal passage." [ZFA:0000066] synonym: "anal pit" RELATED [] synonym: "anus" RELATED [] synonym: "proctodaeum" RELATED [] xref: TAO:0000066 relationship: part_of VHOG:0000395 ! anal region relationship: part_of VHOG:0001766 ! embryo [Term] id: VHOG:0000141 name: adenohypophysis def: "The anterior lobe of the hypophysis (pituitary gland)." [Bgee:curator "Bgee"] synonym: "anterior hypophysis" RELATED [] synonym: "anterior pituitary" RELATED [] xref: TAO:0001282 relationship: part_of VHOG:0000143 ! hypophysis [Term] id: VHOG:0000142 name: neurohypophysis def: "The posterior lobe of the hypophysis (pituitary gland)." [Bgee:curator "Bgee"] synonym: "posterior pituitary" RELATED [] xref: TAO:0001271 relationship: part_of VHOG:0000143 ! hypophysis [Term] id: VHOG:0000143 name: hypophysis def: "A compound organ which is an endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin." [ZFA:0000118] synonym: "hypophysis cerebri" RELATED [] synonym: "pituitary" RELATED [] synonym: "pituitary gland" RELATED [] xref: TAO:0000118 is_a: VHOG:0000653 ! diencephalon gland relationship: part_of VHOG:0000098 ! endocrine system relationship: part_of VHOG:0000658 ! stomatodaeum gland [Term] id: VHOG:0000144 name: aortic arch 6 synonym: "6th arch artery" RELATED [] synonym: "AA6" RELATED [] synonym: "sixth aortic arch" RELATED [] xref: TAO:0005016 is_a: VHOG:0000122 ! aortic arch relationship: part_of VHOG:0001205 ! pharyngeal arch 6 [Term] id: VHOG:0000145 name: aortic arch 5 synonym: "AA5" RELATED [] synonym: "fifth aortic arch" RELATED [] xref: TAO:0005009 is_a: VHOG:0000122 ! aortic arch relationship: part_of VHOG:0001204 ! pharyngeal arch 5 [Term] id: VHOG:0000146 name: aortic arch 4 synonym: "4th arch artery" RELATED [] synonym: "AA4" RELATED [] synonym: "fourth aortic arch" RELATED [] xref: TAO:0005008 is_a: VHOG:0000122 ! aortic arch relationship: part_of VHOG:0000299 ! pharyngeal arch 4 [Term] id: VHOG:0000147 name: aortic arch 3 synonym: "3rd arch artery" RELATED [] synonym: "AA3" RELATED [] synonym: "third aortic arch" RELATED [] xref: TAO:0005007 is_a: VHOG:0000122 ! aortic arch relationship: part_of VHOG:0000298 ! pharyngeal arch 3 [Term] id: VHOG:0000148 name: aortic arch 2 synonym: "2nd arch artery" RELATED [] synonym: "AA2" RELATED [] synonym: "hyoid aortic arch" RELATED [] synonym: "second aortic arch" RELATED [] xref: TAO:0005006 is_a: VHOG:0000122 ! aortic arch relationship: part_of VHOG:0000297 ! pharyngeal arch 2 [Term] id: VHOG:0000149 name: aortic arch 1 synonym: "1st arch artery" RELATED [] synonym: "AA1" RELATED [] synonym: "first aortic arch" RELATED [] synonym: "mandibular aortic arch" RELATED [] xref: TAO:0005005 is_a: VHOG:0000122 ! aortic arch relationship: part_of VHOG:0000296 ! pharyngeal arch 1 [Term] id: VHOG:0000150 name: neuroectoderm def: "Embryonic ectoderm that gives rise to nervous tissue." [XAO:0000042] synonym: "neural ectoderm" RELATED [] synonym: "neurectoderm" RELATED [] synonym: "presumptive central nervous system" RELATED [] xref: TAO:0001120 relationship: part_of VHOG:0000153 ! embryonic ectoderm [Term] id: VHOG:0000152 name: embryonic mesoderm def: "Primary germ layer that is the middle of the embryo's germ layers." [XAO:0000050] synonym: "mesodermal mantle" RELATED [] xref: TAO:0000041 xref: TAO:0001377 is_a: VHOG:0001223 ! primary germ layer relationship: part_of VHOG:0001766 ! embryo [Term] id: VHOG:0000153 name: embryonic ectoderm def: "Primary germ layer that is the outer of the embryo's germ layers and gives rise to epidermis and neural tissue." [XAO:0000001] xref: TAO:0000016 xref: TAO:0001376 is_a: VHOG:0001223 ! primary germ layer relationship: part_of VHOG:0001766 ! embryo [Term] id: VHOG:0000154 name: embryonic endoderm def: "Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut." [XAO:0000090] synonym: "entoderm" RELATED [] xref: TAO:0000017 xref: TAO:0000416 is_a: VHOG:0001223 ! primary germ layer relationship: part_of VHOG:0001766 ! embryo [Term] id: VHOG:0000155 name: pharyngeal arch def: "One of a series of bony or cartilaginous arches that develop in the walls of the mouth cavity and pharynx of the embryo." [XAO:0000096] synonym: "visceral arch" RELATED [] xref: TAO:0001306 relationship: part_of VHOG:0001644 ! head relationship: part_of VHOG:0001766 ! embryo [Term] id: VHOG:0000156 name: ganglion def: "Structures containing a collection of nerve cell bodies." [ZFA:0000190] synonym: "ganglia" RELATED [] xref: TAO:0000190 is_a: VHOG:0001757 ! portion of tissue relationship: part_of VHOG:0000399 ! peripheral nervous system [Term] id: VHOG:0000157 name: brain def: "Cavitated compound organ which is comprised of gray and white matter and surrounds the cerebral ventricular system. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses." [ZFA:0000008, XAO:0000010] xref: TAO:0000008 xref: TAO:0000146 is_a: VHOG:0001730 ! cavitated compound organ relationship: part_of VHOG:0000068 ! neural plate relationship: part_of VHOG:0000293 ! central nervous system relationship: part_of VHOG:0001644 ! head [Term] id: VHOG:0000164 name: cornea def: "Multi-tissue structure that forms the transparent front part of the eye, covering the iris, pupil and anterior chamber." [ZFA:0000640] synonym: "tunica cornea" RELATED [] xref: TAO:0000640 is_a: VHOG:0001762 ! multi-tissue structure relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0000165 name: optic vesicle def: "Portion of tissue that is comprised of neuroepithelium which has pinched off from the anterior neural tube and will form the optic cup." [ZFA:0000050 "adapted from"] synonym: "ocular vesicle" RELATED [] xref: TAO:0000050 is_a: VHOG:0001757 ! portion of tissue relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0000166 name: lens placode def: "Ectodermal primordium of the lens of the eye." [ZFA:0000122] xref: TAO:0000122 relationship: part_of VHOG:0000153 ! embryonic ectoderm relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0000167 name: optic cup def: "Multi-tissue structure that is comprised of neural and non-neural epithelial layers which will form the retina and retinal pigmented epithelium of the mature eye." [ZFA:0001202] synonym: "eye cup" RELATED [] synonym: "ocular cup" RELATED [] xref: TAO:0001202 is_a: VHOG:0001762 ! multi-tissue structure relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0000169 name: lens def: "Portion of tissue that is a transparent, biconvex structure located in the eye through which light is focused." [ZFA:0000035] xref: TAO:0000035 relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0000170 name: mesenchyme def: "Portion of tissue consisting of loosely organized undifferentiated mesodermal cells that give rise to such structures as connective tissues, blood, lymphatics, bone, and cartilage." [XAO:0003046] xref: TAO:0000393 is_a: VHOG:0001757 ! portion of tissue relationship: part_of VHOG:0001766 ! embryo [Term] id: VHOG:0000175 name: heart atrium def: "One of the heart chambers." [Bgee:curator "Bgee"] xref: TAO:0000471 relationship: part_of VHOG:0000276 ! heart [Term] id: VHOG:0000177 name: sinus venosus def: "Heart region collecting blood from the paired common cardinal veins and delivering to the atrium." [ZFA:0000154] xref: TAO:0000154 relationship: part_of VHOG:0001271 ! cardiac conducting system [Term] id: VHOG:0000178 name: epithalamus def: "The roof of the diencephalon lying above the thalamus." [ISBN:978-0030223693 "Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) Glossary G-11"] xref: TAO:0000509 relationship: part_of VHOG:0000318 ! diencephalon [Term] id: VHOG:0000179 name: hypothalamus def: "Brain structure which is the largest portion of diencephalon and is ventrally located." [ZFA:0000032 "adapted from"] xref: TAO:0000032 relationship: part_of VHOG:0000318 ! diencephalon [Term] id: VHOG:0000181 name: medulla oblongata def: "The posterior region of the brain that is continuous with the spinal cord." [ISBN:978-0030223693 "Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) Glossary G-17"] xref: TAO:0000545 relationship: part_of VHOG:0000456 ! myelencephalon relationship: part_of VHOG:0001457 ! brainstem [Term] id: VHOG:0000182 name: reproductive system def: "Anatomical system that has as its parts the organs concerned with reproduction." [XAO:0000142] synonym: "genital system" RELATED [] xref: TAO:0000632 is_a: VHOG:0001725 ! anatomical system relationship: part_of VHOG:0000286 ! urogenital system [Term] id: VHOG:0000186 name: olfactory placode def: "A thick plate of cells derived from the neural ectoderm in the head region of the embryo that develops into the olfactory region of the nasal cavity." [XAO:0000005] synonym: "nasal placode" RELATED [] xref: TAO:0000048 relationship: part_of VHOG:0000153 ! embryonic ectoderm relationship: part_of VHOG:0000287 ! olfactory organ [Term] id: VHOG:0000188 name: oral cavity def: "The cavity of the mouth, bounded by the jaw bones and associated structures (muscles and mucosa)." [http://medical-dictionary.thefreedictionary.com/oral+cavity] xref: TAO:0001027 is_a: VHOG:0001728 ! anatomical space relationship: part_of VHOG:0000812 ! mouth [Term] id: VHOG:0000190 name: optic chiasm def: "Decussation of cranial nerve II axons whereby some cross the midline and some remain ipsilateral." [ZFA:0000556] synonym: "optic chiasma" RELATED [] xref: TAO:0000556 relationship: part_of VHOG:0000543 ! optic II nerve [Term] id: VHOG:0000191 name: somite def: "Undifferentiated mesodermal components of early trunk or tail segments or metameres, derived from paraxial mesoderm." [ZFA:0000155 "adapted from"] synonym: "somitic mesoderm" RELATED [] xref: TAO:0000155 is_a: VHOG:0001758 ! organism subdivision relationship: part_of VHOG:0000114 ! paraxial mesoderm [Term] id: VHOG:0000199 name: notochord def: "A longitudinal flexible rod of cells that in the embryo forms the supporting axis of the body." [XAO:0000055] synonym: "notocord" RELATED [] xref: TAO:0000135 is_a: VHOG:0001757 ! portion of tissue relationship: part_of VHOG:0000317 ! axial skeleton relationship: part_of VHOG:0000334 ! cranium relationship: part_of VHOG:0001766 ! embryo [Term] id: VHOG:0000200 name: chorion def: "The outer membrane enclosing the embryo in reptiles, birds, and mammals." [http://medical-dictionary.thefreedictionary.com/chorion] is_a: VHOG:0000292 ! extraembryonic structure relationship: part_of VHOG:0000726 ! female reproductive system [Term] id: VHOG:0000201 name: tail bud def: "Rapidly proliferating mass of cells at the caudal extremity of the embryo." [XAO:0000107] synonym: "tailbud" RELATED [] xref: TAO:0000077 is_a: VHOG:0001758 ! organism subdivision relationship: part_of VHOG:0001766 ! embryo [Term] id: VHOG:0000202 name: respiratory system def: "Anatomical system that has as its parts the organs involved in respiration (breathing)." [XAO:0000117] xref: TAO:0000272 is_a: VHOG:0001725 ! anatomical system [Term] id: VHOG:0000212 name: bile duct def: "Any of the excretory ducts in the liver that convey bile between the liver and the intestine." [http://medical-dictionary.thefreedictionary.com/bile+duct] relationship: part_of VHOG:0000294 ! liver and biliary system [Term] id: VHOG:0000213 name: cystic duct def: "The duct of the gallbladder which joins the common hepatic duct, thus forming the common biliary duct." [ISBN:978-0828893114 "Dorian AF, Elsevier's encyclopaedic dictionary of medicine, Part B: Anatomy (1988)"] is_a: VHOG:0000212 ! bile duct [Term] id: VHOG:0000214 name: common bile duct def: "The duct formed by the union of the common hepatic and cystic ducts." [ISBN:978-0828893114 "Dorian AF, Elsevier's encyclopaedic dictionary of medicine, Part B: Anatomy (1988)"] is_a: VHOG:0000212 ! bile duct [Term] id: VHOG:0000215 name: extrahepatic part of the hepatic duct relationship: part_of VHOG:0000212 ! bile duct relationship: part_of VHOG:0000219 ! hepatic duct [Term] id: VHOG:0000216 name: intrahepatic part of the hepatic duct relationship: part_of VHOG:0000212 ! bile duct relationship: part_of VHOG:0000219 ! hepatic duct [Term] id: VHOG:0000217 name: right hepatic duct def: "The duct which drains bile from the right half of the liver and unites with the left hepatic duct to form the common hepatic duct." [http://www.medterms.com/script/main/art.asp?articlekey=26032 "adapted from"] is_a: VHOG:0000219 ! hepatic duct relationship: part_of VHOG:0000216 ! intrahepatic part of the hepatic duct [Term] id: VHOG:0000218 name: left hepatic duct def: "The duct which drains bile from the left half of the liver and unites with the right hepatic duct to form the common hepatic duct." [http://www.medterms.com/script/main/art.asp?articlekey=26032 "adapted from"] is_a: VHOG:0000219 ! hepatic duct relationship: part_of VHOG:0000216 ! intrahepatic part of the hepatic duct [Term] id: VHOG:0000219 name: hepatic duct def: "The excretory duct of the liver or one of its branches in the lobes of the liver." [http://medical-dictionary.thefreedictionary.com/hepatic+duct] xref: TAO:0001100 relationship: part_of VHOG:0000257 ! liver [Term] id: VHOG:0000220 name: common hepatic duct def: "The duct which conveys the bile from the liver and unites with the cystic duct to form the common bile duct." [ISBN:978-0828893114] relationship: part_of VHOG:0000215 ! extrahepatic part of the hepatic duct [Term] id: VHOG:0000221 name: gall bladder def: "Membranous muscular sac in which the bile from the liver remains stored until it is required." [ISBN:978-0828893114] synonym: "gallbladder" RELATED [] xref: TAO:0000208 is_a: VHOG:0001723 ! compound organ relationship: part_of VHOG:0000316 ! intraembryonic coelom relationship: part_of VHOG:0001351 ! biliary bud [Term] id: VHOG:0000222 name: dorsal root ganglion def: "Trunk ganglion which is located adjacent to the spine on a dorsal root and contains the cell bodies of afferent sensory nerves." [ZFA:0000200] synonym: "dorsal root ganglia" RELATED [] synonym: "DRG" RELATED [] synonym: "spinal ganglion" RELATED [] xref: TAO:0000200 is_a: VHOG:0000156 ! ganglion [Term] id: VHOG:0000223 name: optic stalk def: "The evagination from the neural tube of the developing embryo which develops the optic cup at its extremity; the stalk persists as the optic nerve." [http://medical-dictionary.thefreedictionary.com/optic+stalk] xref: TAO:0000137 relationship: part_of VHOG:0000275 ! eye relationship: part_of VHOG:0000318 ! diencephalon [Term] id: VHOG:0000224 name: blood def: "A complex mixture of cells suspended in a liquid matrix that delivers nutrients to cells and removes wastes." [ZFA:0000007] synonym: "peripheral blood" RELATED [] xref: TAO:0000007 xref: TAO:0000568 is_a: VHOG:0001726 ! portion of organism substance relationship: part_of VHOG:0000302 ! cardiovascular system relationship: part_of VHOG:0001624 ! hematopoietic system [Term] id: VHOG:0000225 name: intersegmental artery synonym: "intersegmental arteries" RELATED [] xref: TAO:0001061 is_a: VHOG:0001251 ! artery [Term] id: VHOG:0000229 name: retina def: "The portion of the eye developing from the optic primordium and including the neural retina and the retinal pigment layer." [ZFA:0000152] xref: TAO:0000152 xref: TAO:0001071 relationship: part_of VHOG:0000167 ! optic cup [Term] id: VHOG:0000230 name: brain arachnoid mater def: "The middle membrane of the three mammalian meninges covering the brain and spinal cord." [http://medical-dictionary.thefreedictionary.com/arachnoid+mater "adapted from"] relationship: part_of VHOG:0000013 ! brain meninges [Term] id: VHOG:0000231 name: diencephalon arachnoid mater def: "Arachnoid mater that is part of the diencephalon." [Bgee:curator "Bgee"] is_a: VHOG:0000230 ! brain arachnoid mater relationship: part_of VHOG:0000009 ! diencephalon meninges [Term] id: VHOG:0000233 name: midbrain arachnoid mater def: "Arachnoid mater that is part of the midbrain." [Bgee:curator "Bgee"] synonym: "mesencephalon arachnoid mater" RELATED [] is_a: VHOG:0000230 ! brain arachnoid mater relationship: part_of VHOG:0000012 ! midbrain meninges [Term] id: VHOG:0000234 name: spinal cord arachnoid mater def: "The middle membrane of the three mammalian meninges covering the brain and spinal cord." [http://medical-dictionary.thefreedictionary.com/arachnoid+mater "adapted from"] relationship: part_of VHOG:0000443 ! spinal cord meninges [Term] id: VHOG:0000235 name: otic placode def: "Invagination of thickened epithelium near the hindbrain that gives rise to a spherically shaped ear vesicle." [XAO:0000223] synonym: "auditory placode" RELATED [] xref: TAO:0000138 is_a: VHOG:0000103 ! dorsolateral placode relationship: part_of VHOG:0000284 ! inner ear [Term] id: VHOG:0000236 name: hindbrain arachnoid mater def: "Arachnoid mater that is part of the hindbrain." [Bgee:curator "Bgee"] synonym: "rhombencephalon arachnoid mater" RELATED [] is_a: VHOG:0000230 ! brain arachnoid mater relationship: part_of VHOG:0000011 ! hindbrain meninges [Term] id: VHOG:0000237 name: basilar artery synonym: "BA" RELATED [] xref: TAO:0005002 is_a: VHOG:0001251 ! artery [Term] id: VHOG:0000238 name: semicircular duct def: "Fluid-filled toroidal spaces, arranged orthogonally to each other in the ear." [ZFA:0000431] synonym: "membranous semicircular canal" RELATED [] xref: TAO:0000431 relationship: part_of VHOG:0000729 ! membranous labyrinth [Term] id: VHOG:0000239 name: lobar bronchus of right lung accessory lobe relationship: part_of VHOG:0000831 ! right lung accessory lobe [Term] id: VHOG:0000240 name: lobar bronchus of right lung cranial lobe relationship: part_of VHOG:0000859 ! right lung cranial lobe [Term] id: VHOG:0000243 name: epiblast def: "The outer of the two layers of the blastoderm that form during gastrulation, corresponding to primitive ectoderm during gastrulation and to the definitive ectoderm after gastrulation." [ZFA:0000018] synonym: "primitive ectoderm" RELATED [] xref: TAO:0000018 relationship: part_of VHOG:0000742 ! inner cell mass relationship: part_of VHOG:0001202 ! primitive streak - blastopore - germ ring [Term] id: VHOG:0000244 name: pars anterior def: "The anterior part of the adenohypophysis." [http://www.thefreedictionary.com/pars+anterior "adapted from"] synonym: "anterior lobe" RELATED [] synonym: "pars distalis" RELATED [] synonym: "pars glandularis" RELATED [] xref: TAO:0001195 relationship: part_of VHOG:0000141 ! adenohypophysis [Term] id: VHOG:0000245 name: infundibulum def: "Brain structure which is a short stalk connecting the neurohypophysis with the brain. Axons of secretory cells in the floor of the diencephalon traverse the infundibulum and terminate in the neurohypophysis." [ZFA:0001199] synonym: "hypophysial stalk" RELATED [] synonym: "infundibulum of hypothalamus" RELATED [] synonym: "pituitary stalk" RELATED [] xref: TAO:0001199 relationship: part_of VHOG:0000318 ! diencephalon [Term] id: VHOG:0000246 name: anterior semicircular duct def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear." [ZFA:0000314] synonym: "superior semicircular duct" RELATED [] xref: TAO:0000314 xref: TAO:0000469 is_a: VHOG:0000238 ! semicircular duct relationship: part_of VHOG:0000289 ! utricle relationship: part_of VHOG:0001148 ! otic vesicle [Term] id: VHOG:0000247 name: lateral semicircular duct def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear." [ZFA:0000220] xref: TAO:0000220 xref: TAO:0000232 is_a: VHOG:0000238 ! semicircular duct relationship: part_of VHOG:0000289 ! utricle relationship: part_of VHOG:0001148 ! otic vesicle [Term] id: VHOG:0000248 name: posterior semicircular duct def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear." [ZFA:0000262] xref: TAO:0000262 xref: TAO:0000412 is_a: VHOG:0000238 ! semicircular duct relationship: part_of VHOG:0000289 ! utricle relationship: part_of VHOG:0001148 ! otic vesicle [Term] id: VHOG:0000249 name: Meckel's cartilage def: "Meckel's cartilage is the bilaterally paired, rod-like, cartilaginous ventral component of the lower jaw, or ventral mandibular arch." [ZFA:0001205] synonym: "ventral mandibular cartilage" RELATED [] xref: TAO:0001205 is_a: VHOG:0001207 ! cartilage relationship: part_of VHOG:0000453 ! lower jaw relationship: part_of VHOG:0000510 ! ventral pharyngeal arch 1 [Term] id: VHOG:0000250 name: lobar bronchus of the right lung caudal lobe relationship: part_of VHOG:0000857 ! right lung caudal lobe [Term] id: VHOG:0000251 name: ovary def: "Reproductive organ that produces and releases eggs." [XAO:0000258] synonym: "ovaries" RELATED [] xref: TAO:0000403 is_a: VHOG:0000397 ! gonad relationship: part_of VHOG:0000098 ! endocrine system relationship: part_of VHOG:0000726 ! female reproductive system [Term] id: VHOG:0000252 name: testis def: "Reproductive organ that produces and releases sperm." [XAO:0000157] synonym: "testes" RELATED [] xref: TAO:0000598 is_a: VHOG:0000397 ! gonad relationship: part_of VHOG:0000098 ! endocrine system relationship: part_of VHOG:0000725 ! male reproductive system [Term] id: VHOG:0000253 name: thymus def: "Anatomical structure of largely lymphoid tissue that functions in cell-mediated immunity by being the site where T cells develop." [XAO:0000163] synonym: "thymus gland" RELATED [] xref: TAO:0001077 xref: TAO:0001078 relationship: part_of VHOG:0000098 ! endocrine system relationship: part_of VHOG:0000462 ! pharynx relationship: part_of VHOG:0001247 ! immune system relationship: part_of VHOG:0001624 ! hematopoietic system [Term] id: VHOG:0000254 name: pancreatic duct def: "Duct connecting the pancreas with the intestine." [ISBN:978-0828893114] xref: TAO:0001372 relationship: part_of VHOG:0000048 ! exocrine pancreas [Term] id: VHOG:0000255 name: dorsal pancreatic duct is_a: VHOG:0000254 ! pancreatic duct relationship: part_of VHOG:0000448 ! pancreas head relationship: part_of VHOG:0000451 ! pancreas body relationship: part_of VHOG:0000452 ! pancreas tail relationship: part_of VHOG:0001428 ! dorsal pancreatic bud [Term] id: VHOG:0000256 name: ventral pancreatic duct is_a: VHOG:0000254 ! pancreatic duct relationship: part_of VHOG:0000448 ! pancreas head relationship: part_of VHOG:0001429 ! ventral pancreatic bud [Term] id: VHOG:0000257 name: liver def: "Vascular, glandular internal organ that secretes bile and causes important changes in many of the substances contained in the blood." [XAO:0000101] xref: TAO:0000123 xref: TAO:0000124 is_a: VHOG:0001723 ! compound organ relationship: part_of VHOG:0000291 ! foregut-midgut junction relationship: part_of VHOG:0000294 ! liver and biliary system relationship: part_of VHOG:0001247 ! immune system [Term] id: VHOG:0000258 name: diencephalon dura mater def: "Dura mater that is part of the diencephalon." [Bgee:curator "Bgee"] is_a: VHOG:0000270 ! brain dura mater relationship: part_of VHOG:0000009 ! diencephalon meninges [Term] id: VHOG:0000261 name: intermediate mesenchyme xref: TAO:0000990 is_a: VHOG:0000170 ! mesenchyme [Term] id: VHOG:0000262 name: bronchus def: "Each of the two primary divisions of the trachea leading respectively into the right and the left lung." [ISBN:978-0828893114] relationship: part_of VHOG:0000382 ! lower respiratory tract [Term] id: VHOG:0000264 name: dorsal aorta synonym: "DA" RELATED [] synonym: "dorsal aortic root" RELATED [] xref: TAO:0000014 is_a: VHOG:0001523 ! aorta [Term] id: VHOG:0000267 name: internal carotid artery def: "Each of two arteries starting at the bifurcation of the common carotid arteries through which blood circulates to many structures and organs in the head." [http://medical-dictionary.thefreedictionary.com/Internal+carotid+artery "adapted from"] xref: TAO:0005081 is_a: VHOG:0001251 ! artery [Term] id: VHOG:0000268 name: facio-acoustic neural crest def: "Cranial neural crest that gives rise to the facio-acoustic ganglion." [ZFA:0000762] xref: TAO:0000762 is_a: VHOG:0000063 ! cranial neural crest relationship: part_of VHOG:0000170 ! mesenchyme [Term] id: VHOG:0000269 name: trigeminal neural crest def: "Cranial neural crest which gives rise to the trigeminal ganglion." [ZFA:0000080] xref: TAO:0000080 is_a: VHOG:0000063 ! cranial neural crest relationship: part_of VHOG:0000170 ! mesenchyme [Term] id: VHOG:0000270 name: brain dura mater def: "The outermost and densest membrane of the three mammalian meninges covering the brain and spinal cord." [ISBN:978-0828893114] relationship: part_of VHOG:0000013 ! brain meninges [Term] id: VHOG:0000271 name: nasal cavity synonym: "nasal canal" RELATED [] synonym: "nasal pit" RELATED [] synonym: "olfactory cavity" RELATED [] synonym: "olfactory pit" RELATED [] xref: TAO:0000130 is_a: VHOG:0001728 ! anatomical space relationship: part_of VHOG:0000406 ! upper respiratory tract [Term] id: VHOG:0000273 name: arterial system is_a: VHOG:0001248 ! circulatory system [Term] id: VHOG:0000274 name: extraembryonic arterial system is_a: VHOG:0001396 ! extraembryonic vascular system [Term] id: VHOG:0000275 name: eye def: "The organ of sight (visual apparatus)." [XAO:0000179] synonym: "visual apparatus" RELATED [] xref: TAO:0000107 is_a: VHOG:0001407 ! sensory organ is_a: VHOG:0001730 ! cavitated compound organ relationship: part_of VHOG:0000293 ! central nervous system relationship: part_of VHOG:0000399 ! peripheral nervous system relationship: part_of VHOG:0001644 ! head [Term] id: VHOG:0000276 name: heart def: "Blood pumping organ." [Bgee:curator "Bgee"] xref: TAO:0000028 xref: TAO:0000114 xref: TAO:0000115 xref: TAO:0000149 xref: TAO:0000360 is_a: VHOG:0001730 ! cavitated compound organ relationship: part_of VHOG:0000302 ! cardiovascular system [Term] id: VHOG:0000277 name: venous system is_a: VHOG:0001248 ! circulatory system [Term] id: VHOG:0000279 name: cranial nerve def: "Any of the major paired nerves of the head region." [XAO:0003089] xref: TAO:0000641 is_a: VHOG:0001757 ! portion of tissue relationship: part_of VHOG:0000399 ! peripheral nervous system relationship: part_of VHOG:0000900 ! central nervous system nerve [Term] id: VHOG:0000280 name: oral region synonym: "mouth" RELATED [] xref: TAO:0000590 relationship: part_of VHOG:0000202 ! respiratory system relationship: part_of VHOG:0000412 ! alimentary system relationship: part_of VHOG:0001644 ! head [Term] id: VHOG:0000282 name: extraembryonic venous system is_a: VHOG:0001396 ! extraembryonic vascular system [Term] id: VHOG:0000283 name: telencephalon def: "The anterior and dorsal forebrain neuromere." [ZFA:0000079] synonym: "cerebrum" RELATED [] synonym: "telencephalic vesicle" RELATED [] xref: TAO:0000079 xref: TAO:0000571 relationship: part_of VHOG:0000383 ! forebrain [Term] id: VHOG:0000284 name: inner ear def: "Complex labyrinthine structure that comprises sensory endorgans specialized for vestibular, auditory, and acoustico-vestibular sensation." [XAO:0000192] synonym: "internal ear" RELATED [] synonym: "labyrinth" RELATED [] xref: TAO:0000217 is_a: VHOG:0001737 ! anatomical cluster relationship: part_of VHOG:0000330 ! ear [Term] id: VHOG:0000285 name: foregut relationship: part_of VHOG:0000309 ! gut [Term] id: VHOG:0000286 name: urogenital system def: "Anatomical system that has as its parts the organs concerned with the production and excretion of urine and those concerned with reproduction." [XAO:0000140] synonym: "genitourinary system" RELATED [] is_a: VHOG:0001725 ! anatomical system [Term] id: VHOG:0000287 name: olfactory organ synonym: "nasal sac" RELATED [] synonym: "nose" RELATED [] synonym: "peripheral olfactory organ" RELATED [] xref: TAO:0000047 is_a: VHOG:0001407 ! sensory organ relationship: part_of VHOG:0000202 ! respiratory system relationship: part_of VHOG:0001644 ! head [Term] id: VHOG:0000288 name: chondrocranium def: "Cranial skeletal elements composed of cartilage and cartilage replacement bones." [ZFA:0001424] synonym: "calvarium" RELATED [] synonym: "cartilaginous skull" RELATED [] synonym: "chondocranium" RELATED [] synonym: "neurocranium" RELATED [] xref: TAO:0001424 is_a: VHOG:0001737 ! anatomical cluster relationship: part_of VHOG:0000334 ! cranium [Term] id: VHOG:0000289 name: utricle def: "The portion of the membranous labyrinth of the ear into which the semicircular ducts find their outlet." [ISBN:978-0828893114] synonym: "utriculus" RELATED [] xref: TAO:0000700 relationship: part_of VHOG:0001676 ! otolith organ [Term] id: VHOG:0000290 name: midgut relationship: part_of VHOG:0000309 ! gut [Term] id: VHOG:0000291 name: foregut-midgut junction relationship: part_of VHOG:0000309 ! gut [Term] id: VHOG:0000292 name: extraembryonic structure is_a: VHOG:0001759 ! anatomical structure [Term] id: VHOG:0000293 name: central nervous system def: "The brain and spinal cord." [ZFA:0000012] synonym: "CNS" RELATED [] xref: TAO:0000012 is_a: VHOG:0000402 ! nervous system [Term] id: VHOG:0000294 name: liver and biliary system synonym: "hepatobiliary system" RELATED [] synonym: "liver/biliary system" RELATED [] xref: TAO:0000036 relationship: part_of VHOG:0000412 ! alimentary system [Term] id: VHOG:0000296 name: pharyngeal arch 1 synonym: "1st pharyngeal arch" RELATED [] synonym: "1st visceral arch" RELATED [] synonym: "first pharyngeal arch" RELATED [] synonym: "first visceral arch" RELATED [] synonym: "mandibular arch" RELATED [] synonym: "visceral arch 1" RELATED [] xref: TAO:0001595 is_a: VHOG:0000155 ! pharyngeal arch relationship: part_of VHOG:0000334 ! cranium [Term] id: VHOG:0000297 name: pharyngeal arch 2 synonym: "2nd pharyngeal arch" RELATED [] synonym: "2nd visceral arch" RELATED [] synonym: "hyoid arch" RELATED [] synonym: "second pharyngeal arch" RELATED [] synonym: "second visceral arch" RELATED [] synonym: "visceral arch 2" RELATED [] xref: TAO:0001596 is_a: VHOG:0000155 ! pharyngeal arch [Term] id: VHOG:0000298 name: pharyngeal arch 3 synonym: "3rd pharyngeal arch" RELATED [] synonym: "3rd visceral arch" RELATED [] synonym: "third pharyngeal arch" RELATED [] synonym: "third visceral arch" RELATED [] synonym: "visceral arch 3" RELATED [] xref: TAO:0001598 is_a: VHOG:0000155 ! pharyngeal arch relationship: part_of VHOG:0001214 ! gill [Term] id: VHOG:0000299 name: pharyngeal arch 4 synonym: "4th pharyngeal arch" RELATED [] synonym: "4th visceral arch" RELATED [] synonym: "fourth pharyngeal arch" RELATED [] synonym: "fourth visceral arch" RELATED [] synonym: "visceral arch 4" RELATED [] xref: TAO:0001599 is_a: VHOG:0000155 ! pharyngeal arch relationship: part_of VHOG:0001214 ! gill [Term] id: VHOG:0000300 name: floor plate neural tube def: "Organizing center consisting of a small group of cells located at the ventral midline of the neural tube that influences the development of the nervous system, governing the specification of neuronal cell types and directing axonal trajectories." [XAO:0000306] synonym: "floorplate neural tube" RELATED [] xref: TAO:0001434 relationship: part_of VHOG:0000307 ! neural tube [Term] id: VHOG:0000301 name: right lung relationship: part_of VHOG:0000310 ! lung - swim bladder [Term] id: VHOG:0000302 name: cardiovascular system def: "Anatomical system that has as its parts the heart and blood vessels." [XAO:0000100] xref: TAO:0000010 is_a: VHOG:0001725 ! anatomical system [Term] id: VHOG:0000303 name: roof plate neural tube xref: TAO:0001436 relationship: part_of VHOG:0000307 ! neural tube [Term] id: VHOG:0000305 name: pelvic girdle def: "Arched skeletal structure that supports the hind limbs." [XAO:0003064] xref: TAO:0000565 is_a: VHOG:0001737 ! anatomical cluster relationship: part_of VHOG:0001666 ! appendicular skeleton [Term] id: VHOG:0000306 name: alar plate metencephalon def: "The dorsal half of the developing neural tube that is the metencephalon." [DOI:10.1002/1097-0185(20000615)261:3<111::AID-AR6>3.0.CO;2-F] relationship: part_of VHOG:0000326 ! lateral wall metencephalon [Term] id: VHOG:0000307 name: neural tube def: "The dorsal tubular structure in the vertebrate embryo that develops into the brain and spinal cord." [http://medical-dictionary.thefreedictionary.com/neural+tube] xref: TAO:0001135 is_a: VHOG:0000150 ! neuroectoderm relationship: part_of VHOG:0000601 ! spinal cord [Term] id: VHOG:0000308 name: parotid gland def: "A mammalian salivary gland located caudal to the ear." [ISBN:978-0030223693 "Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) Glossary G-22"] is_a: VHOG:0000376 ! salivary gland [Term] id: VHOG:0000309 name: gut def: "The alimentary or digestive tract, and associated organs." [ZFA:0000112] synonym: "alimentary canal" RELATED [] synonym: "gut tube" RELATED [] xref: TAO:0000112 relationship: part_of VHOG:0000412 ! alimentary system [Term] id: VHOG:0000310 name: lung - swim bladder xref: TAO:0000076 is_a: VHOG:0001730 ! cavitated compound organ relationship: part_of VHOG:0000202 ! respiratory system relationship: part_of VHOG:0000316 ! intraembryonic coelom [Term] id: VHOG:0000311 name: external ear def: "The external part of the organ, which consists of an outer portion (external auditory meatus) which leads to the tympanum." [ISBN:978-0828893114] synonym: "outer ear" RELATED [] relationship: part_of VHOG:0000330 ! ear [Term] id: VHOG:0000312 name: middle ear def: "The intermediate portion of the ear which consists of a small air-filled and membrane-lined chamber. It is lodged in the temporal bone and continues with the nasopharynx through the Eustachian tube. It is separated from the external ear by the tympanic membrane and from the inner ear by the fenestrae." [ISBN:978-0828893114] synonym: "tympanic cavity" RELATED [] relationship: part_of VHOG:0000330 ! ear [Term] id: VHOG:0000315 name: viscerocranium def: "The part of the skull derived from the embryonic pharyngeal arches." [http://www.encyclo.co.uk/define/Viscerocranium] synonym: "facial bone" RELATED [] synonym: "splanchnocranium" RELATED [] xref: TAO:0001216 is_a: VHOG:0001737 ! anatomical cluster relationship: part_of VHOG:0000334 ! cranium [Term] id: VHOG:0000316 name: intraembryonic coelom xref: TAO:0001438 relationship: part_of VHOG:0000118 ! lateral plate mesoderm [Term] id: VHOG:0000317 name: axial skeleton def: "Skeletal structure that has as its parts the vertebral column, located in the dorsal part of the trunk, and formed by a series of vertebrae. It provides suspension for the appendicular skeleton and protection for the spinal nerve cord." [XAO:0003073] synonym: "postcranial axial skeleton" RELATED [] xref: TAO:0000317 is_a: VHOG:0001254 ! skeletal system [Term] id: VHOG:0000318 name: diencephalon def: "The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis)." [ZFA:0000101] xref: TAO:0000101 xref: TAO:0000574 relationship: part_of VHOG:0000383 ! forebrain [Term] id: VHOG:0000319 name: skeletal muscle def: "A type of muscle used to create movement, by applying force to bones and joints." [XAO:0000174] synonym: "striated muscle" RELATED [] is_a: VHOG:0001245 ! muscle [Term] id: VHOG:0000320 name: basal plate metencephalon def: "The ventral half of the developing neural tube that is the metencephalon." [DOI:10.1002/1097-0185(20000615)261:3<111::AID-AR6>3.0.CO;2-F] relationship: part_of VHOG:0000326 ! lateral wall metencephalon [Term] id: VHOG:0000321 name: alar plate myelencephalon def: "The dorsal half of the developing neural tube that is the myelencephalon." [DOI:10.1002/1097-0185(20000615)261:3<111::AID-AR6>3.0.CO;2-F] relationship: part_of VHOG:0000359 ! lateral wall myelencephalon [Term] id: VHOG:0000322 name: basal plate myelencephalon def: "The ventral half of the developing neural tube that is the myelencephalon." [DOI:10.1002/1097-0185(20000615)261:3<111::AID-AR6>3.0.CO;2-F] relationship: part_of VHOG:0000359 ! lateral wall myelencephalon [Term] id: VHOG:0000323 name: alar plate medulla oblongata def: "The dorsal half of the developing neural tube that is the medulla oblongata." [DOI:10.1002/1097-0185(20000615)261:3<111::AID-AR6>3.0.CO;2-F] relationship: part_of VHOG:0000327 ! lateral wall medulla oblongata [Term] id: VHOG:0000324 name: basal plate medulla oblongata def: "The ventral half of the developing neural tube that is the medulla oblongata." [DOI:10.1002/1097-0185(20000615)261:3<111::AID-AR6>3.0.CO;2-F] relationship: part_of VHOG:0000327 ! lateral wall medulla oblongata [Term] id: VHOG:0000325 name: olfactory cortex synonym: "olfactory lobe" RELATED [] is_a: VHOG:0000833 ! olfactory lobe relationship: part_of VHOG:0000722 ! cerebral cortex [Term] id: VHOG:0000326 name: lateral wall metencephalon relationship: part_of VHOG:0000741 ! metencephalon [Term] id: VHOG:0000327 name: lateral wall medulla oblongata relationship: part_of VHOG:0000181 ! medulla oblongata [Term] id: VHOG:0000328 name: right atrium is_a: VHOG:0000175 ! heart atrium [Term] id: VHOG:0000329 name: spinal peripheral nervous system relationship: part_of VHOG:0000399 ! peripheral nervous system [Term] id: VHOG:0000330 name: ear def: "The organ of hearing and of equilibrium." [http://medical-dictionary.thefreedictionary.com/ear] synonym: "auditory apparatus" RELATED [] synonym: "auditory/vestibular system" RELATED [] synonym: "vestibuloauditory system" RELATED [] xref: TAO:0001138 is_a: VHOG:0001407 ! sensory organ relationship: part_of VHOG:0000399 ! peripheral nervous system relationship: part_of VHOG:0001644 ! head [Term] id: VHOG:0000331 name: vault of skull relationship: part_of VHOG:0000334 ! cranium [Term] id: VHOG:0000334 name: cranium def: "Skeletal system which is part of the skull, including the splanchnocranium, chondrocranium, and dermatocranium." [ZFA:0000737] synonym: "cranial bone" RELATED [] synonym: "cranial skeleton" RELATED [] synonym: "skull" RELATED [] xref: TAO:0000737 is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0001644 ! head [Term] id: VHOG:0000335 name: pectoral girdle and thoracic body wall is_a: VHOG:0001254 ! skeletal system [Term] id: VHOG:0000336 name: limb def: "Organism subdivision that has as its parts the jointed appendages used for locomotion and manipulation." [XAO:0003027] synonym: "extremity" RELATED [] is_a: VHOG:0001758 ! organism subdivision [Term] id: VHOG:0000337 name: hindlimb def: "One of the pair of limbs that are situated posteriorly." [XAO:0003031] synonym: "hind limb" RELATED [] is_a: VHOG:0000336 ! limb [Term] id: VHOG:0000339 name: arm is_a: VHOG:0001753 ! forelimb - pectoral fin [Term] id: VHOG:0000340 name: elbow relationship: part_of VHOG:0000339 ! arm [Term] id: VHOG:0000341 name: forelimb zeugopodium def: "The middle forelimb region." [ISBN:978-0072528305 "Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.321"] relationship: part_of VHOG:0000339 ! arm [Term] id: VHOG:0000342 name: shoulder relationship: part_of VHOG:0000339 ! arm [Term] id: VHOG:0000343 name: forelimb stylopodium def: "The proximal forelimb region." [Bgee:curator "Bgee"] relationship: part_of VHOG:0000339 ! arm [Term] id: VHOG:0000344 name: forelimb autopodium def: "The distal forelimb region." [Bgee:curator "Bgee"] relationship: part_of VHOG:0001753 ! forelimb - pectoral fin [Term] id: VHOG:0000345 name: leg is_a: VHOG:0000337 ! hindlimb relationship: part_of VHOG:0001260 ! hindlimb bud [Term] id: VHOG:0000346 name: hip synonym: "pelvic girdle" RELATED [] relationship: part_of VHOG:0000345 ! leg [Term] id: VHOG:0000347 name: knee relationship: part_of VHOG:0000345 ! leg [Term] id: VHOG:0000348 name: hindlimb zeudopodium def: "The middle hindlimb region." [Bgee:curator "Bgee"] synonym: "hind limb zeudopodium" RELATED [] relationship: part_of VHOG:0000345 ! leg [Term] id: VHOG:0000349 name: hindlimb stylopodium def: "The proximal hindlimb region." [Bgee:curator "Bgee"] synonym: "hind limb stylopodium" RELATED [] relationship: part_of VHOG:0000345 ! leg [Term] id: VHOG:0000350 name: hindlimb autopodium def: "The distal hindlimb region." [Bgee:curator "Bgee"] synonym: "hind limb autopodium" RELATED [] relationship: part_of VHOG:0000337 ! hindlimb relationship: part_of VHOG:0001260 ! hindlimb bud [Term] id: VHOG:0000351 name: ventral mesogastrium def: "The ventral sheet of the primitive mesentery that encloses the stomach. The lesser omentum develops from the ventral mesogastrium." [http://medical-dictionary.thefreedictionary.com/mesogastrium] is_a: VHOG:0000358 ! mesogastrium [Term] id: VHOG:0000352 name: dorsal mesogastrium def: "The dorsal sheet of the primitive mesentery that encloses the stomach. The greater omentum develops from the dorsal mesogastrium." [http://medical-dictionary.thefreedictionary.com/mesogastrium] is_a: VHOG:0000358 ! mesogastrium [Term] id: VHOG:0000353 name: heart mesentery relationship: part_of VHOG:0000276 ! heart [Term] id: VHOG:0000354 name: gastrosplenic ligament def: "Mesenteric fold extending from the greater curvature of the stomach to the spleen." [ISBN:978-0828893114] is_a: VHOG:0001272 ! ligament relationship: part_of VHOG:0000356 ! greater omentum [Term] id: VHOG:0000355 name: falciform ligament is_a: VHOG:0001272 ! ligament relationship: part_of VHOG:0000351 ! ventral mesogastrium [Term] id: VHOG:0000356 name: greater omentum def: "A filmy, transparent double fold of the peritoneum, draping the transverse colon and coils of the small intestine. It is attached along the greater curvature of the stomach and the first part of the duodenum." [http://medical-dictionary.thefreedictionary.com/greater+omentum] relationship: part_of VHOG:0000316 ! intraembryonic coelom relationship: part_of VHOG:0000352 ! dorsal mesogastrium [Term] id: VHOG:0000357 name: lesser omentum def: "A membranous extension of the peritoneum from the peritoneal layers covering the ventral and the dorsal surfaces of the stomach and the first part of the duodenum. The lesser omentum extends from the portal fissure of the liver to the diaphragm, where the layers separate to enclose the end of the esophagus. It also forms two ligaments, one associated with the liver, the hepatogastric ligament, and the other, the heptatoduodenal ligament, with the duodenum." [http://medical-dictionary.thefreedictionary.com/lesser+omentum] relationship: part_of VHOG:0000351 ! ventral mesogastrium [Term] id: VHOG:0000358 name: mesogastrium def: "The portion of the primitive mesentery that encloses the stomach; from its dorsal sheet, the greater omentum develops, and from its ventral sheet, the lesser omentum." [http://medical-dictionary.thefreedictionary.com/mesogastrium] synonym: "stomach mesentery" RELATED [] relationship: part_of VHOG:0000408 ! stomach [Term] id: VHOG:0000359 name: lateral wall myelencephalon relationship: part_of VHOG:0000456 ! myelencephalon [Term] id: VHOG:0000360 name: duodenum rostral part relationship: part_of VHOG:0000052 ! duodenum [Term] id: VHOG:0000361 name: duodenum caudal part relationship: part_of VHOG:0000052 ! duodenum [Term] id: VHOG:0000362 name: primary palate def: "The shelf separating the oral and nasal cavities that is formed during early embryonic development from protrusions of tissue between the olfactory pits." [http://medical-dictionary.thefreedictionary.com/primary+palate] synonym: "primitive palate" RELATED [] relationship: part_of VHOG:0000426 ! premaxilla [Term] id: VHOG:0000363 name: sublingual gland def: "One of a pair of small salivary glands situated under the mucous membrane of the floor of the mouth, beneath the tongue." [http://medical-dictionary.thefreedictionary.com/sublingual+gland] is_a: VHOG:0000376 ! salivary gland [Term] id: VHOG:0000364 name: submandibular gland def: "Either of two major salivary glands situated in the neck near the lower edge of each side of the mandible and emptying into the submandibular duct." [http://medical-dictionary.thefreedictionary.com/submandibular+gland] synonym: "submaxillary gland" RELATED [] is_a: VHOG:0000376 ! salivary gland [Term] id: VHOG:0000369 name: left atrium is_a: VHOG:0000175 ! heart atrium [Term] id: VHOG:0000370 name: main bronchus is_a: VHOG:0000262 ! bronchus [Term] id: VHOG:0000371 name: trachea def: "The respiratory tube between the larynx and the bronchi." [ISBN:978-0030223693 "Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) Glossary G-29"] relationship: part_of VHOG:0001404 ! laryngo-tracheal groove [Term] id: VHOG:0000372 name: brachial plexus def: "A nerve plexus originating from the anterior branches of the last four cervical and the first thoracic spinal nerves, giving off many of the principal nerves of the shoulder, chest, and arms." [http://medical-dictionary.thefreedictionary.com/brachial+plexus] relationship: part_of VHOG:0000925 ! spinal nerve plexus relationship: part_of VHOG:0001753 ! forelimb - pectoral fin [Term] id: VHOG:0000373 name: endolymphatic appendage def: "An outgrowth of the otic vesicle that forms the endolymphatic duct and sac during embryonic development." [http://medical-dictionary.thefreedictionary.com/endolymphatic+appendage] relationship: part_of VHOG:0001148 ! otic vesicle [Term] id: VHOG:0000374 name: saccule def: "The most ventral chamber of the membranous labyrinth." [ISBN:978-0030223693 "Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) Glossary G-25"] synonym: "sacculus" RELATED [] xref: TAO:0000428 relationship: part_of VHOG:0001676 ! otolith organ [Term] id: VHOG:0000375 name: nasopharynx def: "The uppermost of the three regions of the throat (pharynx), situated behind the nasal cavity and extending from the posterior nares to the level above the soft palate." [http://medical-dictionary.thefreedictionary.com/nasopharynx] is_a: VHOG:0000406 ! upper respiratory tract relationship: part_of VHOG:0000462 ! pharynx [Term] id: VHOG:0000376 name: salivary gland def: "A gland that produces the saliva." [ISBN:978-0030223693 "Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) Glossary G-25"] is_a: VHOG:0000652 ! oral region gland relationship: part_of VHOG:0000188 ! oral cavity [Term] id: VHOG:0000378 name: palatal shelf def: "The outgrowths of the embryonic maxillae that come together during prenatal development to form the secondary palate." [http://medical-dictionary.thefreedictionary.com/palatal] synonym: "palatine shelf" RELATED [] relationship: part_of VHOG:0000454 ! upper jaw relationship: part_of VHOG:0000511 ! dorsal pharyngeal arch 1 relationship: part_of VHOG:0000812 ! mouth [Term] id: VHOG:0000379 name: bulbus cordis - bulbus arteriosus xref: TAO:0000173 relationship: part_of VHOG:0000276 ! heart [Term] id: VHOG:0000382 name: lower respiratory tract relationship: part_of VHOG:0000393 ! respiratory tract [Term] id: VHOG:0000383 name: forebrain def: "The most anterior region of the brain including both the telencephalon and diencephalon." [ZFA:0000109] synonym: "prosencephalon" RELATED [] xref: TAO:0000062 xref: TAO:0000109 relationship: part_of VHOG:0000157 ! brain relationship: part_of VHOG:0001200 ! anterior neural plate [Term] id: VHOG:0000384 name: sympathetic nervous system def: "The part of the autonomic nervous system which chiefly contains adrenergic fibres and tends to control and reduce secretions, decrease the contractility and hence the tone of smooth muscles and provoke the contraction of blood vessels. Essentially, it consists of preganglionic fibres from the thoracic and upper lumbar parts of the spinal cord. These fibres, by means of delicate rami communicantes, cross over to ganglia sited in a pair of ganglionated cords on each side of the vertebral column or to more peripheral ganglia." [ISBN:978-0828893114] xref: TAO:0001576 relationship: part_of VHOG:0000396 ! autonomic nervous system [Term] id: VHOG:0000385 name: interatrial septum def: "The partition separating the right and left atria of the heart." [http://medical-dictionary.thefreedictionary.com/interatrial+septum] synonym: "atrial septum" RELATED [] relationship: part_of VHOG:0000175 ! heart atrium [Term] id: VHOG:0000386 name: interventricular septum def: "The partition separating the right and left ventricles of the heart." [http://medical-dictionary.thefreedictionary.com/interventricular+septum] synonym: "ventricular septum" RELATED [] relationship: part_of VHOG:0000435 ! heart ventricle [Term] id: VHOG:0000387 name: epithelium def: "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina." [ZFA:0001486] xref: CARO:0000066 xref: TAO:0001486 is_a: VHOG:0001757 ! portion of tissue [Term] id: VHOG:0000388 name: lower eyelid relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0000389 name: upper eyelid relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0000393 name: respiratory tract relationship: part_of VHOG:0000202 ! respiratory system [Term] id: VHOG:0000394 name: pleura def: "The serous membrane that covers the lungs and lines the pleural cavity." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.264"] relationship: part_of VHOG:0000202 ! respiratory system relationship: part_of VHOG:0000581 ! pleural cavity [Term] id: VHOG:0000395 name: anal region relationship: part_of VHOG:0000056 ! intestine [Term] id: VHOG:0000396 name: autonomic nervous system def: "Nervous system including a portion of the central and peripheral systems and presiding over the control and coordination of the vegetative functions of the organism. It innervates smooth and cardiac muscles and glandular tissues and is responsible for many actions which are more or less automatic (e.g. secretion, vasoconstriction etc.). It consists of the sympathetic and parasympathetic nervous systems." [ISBN:978-0828893114] synonym: "ANS" RELATED [] xref: TAO:0001574 is_a: VHOG:0000402 ! nervous system relationship: part_of VHOG:0000399 ! peripheral nervous system [Term] id: VHOG:0000397 name: gonad def: "The part of the reproductive system that produces and releases eggs (ovary) or sperm (testis)." [ZFA:0000413] xref: TAO:0000413 xref: TAO:0001262 is_a: VHOG:0001730 ! cavitated compound organ relationship: part_of VHOG:0000182 ! reproductive system relationship: part_of VHOG:0000316 ! intraembryonic coelom [Term] id: VHOG:0000398 name: mammary gland def: "Any of the milk-producing apocrine glands typically occurring in pairs in female mammals and consisting of lobes containing clusters of alveoli with a system of ducts to convey the milk to an external nipple or teat." [http://medical-dictionary.thefreedictionary.com/mammary+gland] is_a: VHOG:0000654 ! integumental system gland relationship: part_of VHOG:0000726 ! female reproductive system [Term] id: VHOG:0000399 name: peripheral nervous system def: "One of the two major divisions of the nervous system. Its nerves connect the central nervous system with sensory organs, other organs, muscles, blood vessels and glands." [XAO:0000178] synonym: "PNS" RELATED [] xref: TAO:0000142 is_a: VHOG:0000402 ! nervous system [Term] id: VHOG:0000400 name: embryonic umbilical vein def: "Vein passing through the umbilical cord to the fetus and returning the purified and nutrient blood from the placenta." [ISBN:978-0828893114] relationship: part_of VHOG:0000277 ! venous system [Term] id: VHOG:0000401 name: embryonic vitelline vein relationship: part_of VHOG:0000277 ! venous system [Term] id: VHOG:0000402 name: nervous system def: "A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS)." [ZFA:0000396] xref: TAO:0000396 is_a: VHOG:0001725 ! anatomical system [Term] id: VHOG:0000403 name: integumental system def: "Anatomical system that consists of the skin and its appendages." [XAO:0000176] synonym: "dermal system" RELATED [] synonym: "integumentary system" RELATED [] is_a: VHOG:0001725 ! anatomical system [Term] id: VHOG:0000406 name: upper respiratory tract relationship: part_of VHOG:0000393 ! respiratory tract [Term] id: VHOG:0000408 name: stomach def: "Internal organ that is the dilated portion of the alimentary tract situated between the esophagus and the beginning of the duodenum. It produces gastric juices involved in the breakdown of food." [XAO:0000128] is_a: VHOG:0001730 ! cavitated compound organ relationship: part_of VHOG:0000285 ! foregut [Term] id: VHOG:0000409 name: hindbrain dura mater def: "Dura mater that is part of the hindbrain." [Bgee:curator "Bgee"] synonym: "rhombencephalon dura mater" RELATED [] is_a: VHOG:0000270 ! brain dura mater relationship: part_of VHOG:0000011 ! hindbrain meninges [Term] id: VHOG:0000410 name: midbrain dura mater def: "Dura mater that is part of the midbrain." [Bgee:curator "Bgee"] synonym: "mesencephalon dura mater" RELATED [] is_a: VHOG:0000270 ! brain dura mater relationship: part_of VHOG:0000012 ! midbrain meninges [Term] id: VHOG:0000411 name: spinal cord dura mater def: "The outermost and densest membrane of the three mammalian meninges covering the brain and spinal cord." [ISBN:978-0828893114] relationship: part_of VHOG:0000443 ! spinal cord meninges [Term] id: VHOG:0000412 name: alimentary system def: "Anatomical system that has as its parts the organs devoted to the ingestion, digestion, and assimilation of food and the discharge of residual wastes." [XAO:0000125] synonym: "digestive system" RELATED [] synonym: "gut" RELATED [] xref: TAO:0000339 is_a: VHOG:0001725 ! anatomical system [Term] id: VHOG:0000413 name: midgut mesentery relationship: part_of VHOG:0000290 ! midgut [Term] id: VHOG:0000414 name: urogenital sinus def: "The ventral part of the cloaca after its separation from the rectum, giving rise to the lower part of the bladder in both sexes, to the prostatic portion of the male urethra, and to the urethra and vestibule in the female." [http://medical-dictionary.thefreedictionary.com/urogenital+sinus] relationship: part_of VHOG:0000286 ! urogenital system [Term] id: VHOG:0000415 name: oesophagus mesentery synonym: "esophagus mesentery" RELATED [] relationship: part_of VHOG:0000450 ! oesophagus [Term] id: VHOG:0000416 name: midgut loop mesentery relationship: part_of VHOG:0000673 ! midgut loop [Term] id: VHOG:0000418 name: thyroid synonym: "thyroid follicle" RELATED [] synonym: "thyroid gland" RELATED [] xref: TAO:0001072 xref: TAO:0001081 is_a: VHOG:0000650 ! foregut gland relationship: part_of VHOG:0000098 ! endocrine system relationship: part_of VHOG:0000462 ! pharynx [Term] id: VHOG:0000419 name: tongue def: "A mobile mass of muscular tissue that is covered with mucous membrane, occupies much of the cavity of the mouth, forms part of its floor, bears the organ of taste, and assists in chewing and swallowing." [http://medical-dictionary.thefreedictionary.com/tongue] is_a: VHOG:0001407 ! sensory organ relationship: part_of VHOG:0000188 ! oral cavity relationship: part_of VHOG:0000462 ! pharynx [Term] id: VHOG:0000420 name: pyloric region def: "The orifice which allows the passage from the stomach into the intestine." [ISBN:978-0828893114] synonym: "pylorus" RELATED [] relationship: part_of VHOG:0000408 ! stomach [Term] id: VHOG:0000421 name: stomach fundus def: "The greater curvature of the stomach." [ISBN:978-0828893114] synonym: "gastric fundus" RELATED [] relationship: part_of VHOG:0000408 ! stomach [Term] id: VHOG:0000423 name: mesentery of rostral part of duodenum relationship: part_of VHOG:0000360 ! duodenum rostral part [Term] id: VHOG:0000424 name: mesentery of caudal part of duodenum relationship: part_of VHOG:0000361 ! duodenum caudal part [Term] id: VHOG:0000426 name: premaxilla def: "One of the bones of the upper jaw situated between and in front of the maxillae." [ISBN:978-0828893114] xref: TAO:0000567 is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000429 ! upper jaw skeleton relationship: part_of VHOG:0000511 ! dorsal pharyngeal arch 1 relationship: part_of VHOG:0000812 ! mouth relationship: part_of VHOG:0001665 ! dermatocranium [Term] id: VHOG:0000428 name: lower jaw skeleton is_a: VHOG:0001254 ! skeletal system relationship: part_of VHOG:0000315 ! viscerocranium [Term] id: VHOG:0000429 name: upper jaw skeleton is_a: VHOG:0001254 ! skeletal system relationship: part_of VHOG:0000315 ! viscerocranium [Term] id: VHOG:0000430 name: foregut-midgut junction mesentery relationship: part_of VHOG:0000291 ! foregut-midgut junction [Term] id: VHOG:0000431 name: hindbrain sinus synonym: "rhombencephalon sinus" RELATED [] relationship: part_of VHOG:0001322 ! hindbrain venous system [Term] id: VHOG:0000432 name: dorsal mesocardium def: "The mesentery of the embryonic heart." [ISBN:978-0828893114] is_a: VHOG:0000353 ! heart mesentery [Term] id: VHOG:0000433 name: alimentary system mesentery is_a: VHOG:0000387 ! epithelium relationship: part_of VHOG:0000412 ! alimentary system [Term] id: VHOG:0000435 name: heart ventricle def: "One of the heart chambers." [Bgee:curator "Bgee"] synonym: "cardiac ventricle" RELATED [] xref: TAO:0000009 is_a: VHOG:0001728 ! anatomical space relationship: part_of VHOG:0000276 ! heart [Term] id: VHOG:0000436 name: bulbus cordis caudal half relationship: part_of VHOG:0000379 ! bulbus cordis - bulbus arteriosus [Term] id: VHOG:0000437 name: bulbus cordis rostral half relationship: part_of VHOG:0000379 ! bulbus cordis - bulbus arteriosus [Term] id: VHOG:0000439 name: spinal cord neural plate def: "Neural plate that is part of the spinal cord." [Bgee:curator "Bgee"] xref: TAO:0007021 relationship: part_of VHOG:0000601 ! spinal cord [Term] id: VHOG:0000440 name: greater sac mesothelium relationship: part_of VHOG:0000858 ! greater sac [Term] id: VHOG:0000441 name: omental bursa mesothelium relationship: part_of VHOG:0000458 ! omental bursa [Term] id: VHOG:0000443 name: spinal cord meninges def: "Meninges that are part of the spinal cord." [Bgee:curator "Bgee"] is_a: VHOG:0001295 ! meninx relationship: part_of VHOG:0000601 ! spinal cord [Term] id: VHOG:0000444 name: lens fibres def: "Fibres resembling a ribbon and arranged in very thin plates in the lens." [ISBN:978-0828893114] relationship: part_of VHOG:0000169 ! lens relationship: part_of VHOG:0001163 ! lens vesicle [Term] id: VHOG:0000445 name: hypopharynx def: "The inferior portion of the pharynx, between the epiglottis and the larynx." [http://medical-dictionary.thefreedictionary.com/hypopharynx] synonym: "laryngopharynx" RELATED [] relationship: part_of VHOG:0000462 ! pharynx [Term] id: VHOG:0000447 name: pericardio-peritoneal canal mesothelium relationship: part_of VHOG:0001498 ! pericardio-peritoneal canal [Term] id: VHOG:0000448 name: pancreas head relationship: part_of VHOG:0000050 ! pancreas [Term] id: VHOG:0000449 name: lingual swelling def: "Primordium of the tongue; the median swelling and the distal and proximal swellings arise from the ventral aspect of the stomodeum." [http://medical-dictionary.thefreedictionary.com/lingual+swellings] relationship: part_of VHOG:0000419 ! tongue [Term] id: VHOG:0000450 name: oesophagus def: "Tube that connects the pharynx to the stomach." [Bgee:curator "Bgee"] synonym: "esophagus" RELATED [] xref: TAO:0000204 relationship: part_of VHOG:0000285 ! foregut [Term] id: VHOG:0000451 name: pancreas body synonym: "pancreas corpus" RELATED [] relationship: part_of VHOG:0000050 ! pancreas [Term] id: VHOG:0000452 name: pancreas tail relationship: part_of VHOG:0000050 ! pancreas [Term] id: VHOG:0000453 name: lower jaw relationship: part_of VHOG:0000280 ! oral region [Term] id: VHOG:0000454 name: upper jaw relationship: part_of VHOG:0000280 ! oral region [Term] id: VHOG:0000455 name: lateral wall midbrain synonym: "lateral wall mesencephalon" RELATED [] xref: TAO:0000906 relationship: part_of VHOG:0000069 ! midbrain [Term] id: VHOG:0000456 name: myelencephalon def: "The posterior of the two brain vesicles formed by specialization of the rhombencephalon in the developing embryo, it comprises the medulla oblongata." [http://medical-dictionary.thefreedictionary.com/myelencephalon] relationship: part_of VHOG:0000070 ! hindbrain [Term] id: VHOG:0000457 name: oropharynx def: "One of the three anatomic divisions of the pharynx that lies posterior to the mouth and is continuous above with the nasopharynx and below with the laryngopharynx. It extends behind the mouth from the soft palate above to the level of the hyoid bone below and contains the palatine and lingual tonsils." [http://medical-dictionary.thefreedictionary.com/oropharynx] relationship: part_of VHOG:0000462 ! pharynx [Term] id: VHOG:0000458 name: omental bursa def: "The lesser sac of the peritoneum. Part of the peritoneal cavity behind the liver, lesser omentum and stomach. It lies across the transverse mesocolon and extends into the greater omentum." [ISBN:978-0828893114] relationship: part_of VHOG:0000852 ! peritoneal cavity [Term] id: VHOG:0000459 name: hindgut relationship: part_of VHOG:0000309 ! gut [Term] id: VHOG:0000460 name: pinna def: "The external expanded part of the ear characterized by a funnel-shaped structure through which the sound vibrations are received." [ISBN:978-0828893114] synonym: "auricle" RELATED [] relationship: part_of VHOG:0000311 ! external ear [Term] id: VHOG:0000461 name: auditory ossicle def: "The small bones of the middle ear: incus, malleus, and stapes." [http://medical-dictionary.thefreedictionary.com/auditory+ossicles] synonym: "auditory bone" RELATED [] synonym: "ear bone" RELATED [] relationship: part_of VHOG:0000312 ! middle ear [Term] id: VHOG:0000462 name: pharynx def: "The portion of the alimentary canal between the mouth and the oesophagus." [ISBN:978-0828893114] xref: TAO:0000056 relationship: part_of VHOG:0000202 ! respiratory system relationship: part_of VHOG:0000285 ! foregut relationship: part_of VHOG:0001644 ! head [Term] id: VHOG:0000464 name: first polar body def: "The small cell produced during the first meiotic division in the maturation of the female gamete, or ovum." [http://medical-dictionary.thefreedictionary.com/polar+body] is_a: VHOG:0000292 ! extraembryonic structure [Term] id: VHOG:0000465 name: second polar body def: "The small cell produced during the second meiotic division in the maturation of the female gamete, or ovum." [http://medical-dictionary.thefreedictionary.com/polar+body] is_a: VHOG:0000292 ! extraembryonic structure [Term] id: VHOG:0000466 name: hindbrain pia mater def: "Pia mater that is part of the hindbrain." [Bgee:curator "Bgee"] synonym: "rhombencephalon pia mater" RELATED [] is_a: VHOG:0000470 ! brain pia mater relationship: part_of VHOG:0000011 ! hindbrain meninges [Term] id: VHOG:0000467 name: midbrain pia mater def: "Pia mater that is part of the midbrain." [Bgee:curator "Bgee"] synonym: "mesencephalon pia mater" RELATED [] is_a: VHOG:0000470 ! brain pia mater relationship: part_of VHOG:0000012 ! midbrain meninges [Term] id: VHOG:0000468 name: spinal cord pia mater def: "The innermost of the three mammalian meninges covering the brain and spinal cord." [http://medical-dictionary.thefreedictionary.com/pia+mater "adapted from"] is_a: VHOG:0000470 ! brain pia mater relationship: part_of VHOG:0000443 ! spinal cord meninges [Term] id: VHOG:0000470 name: brain pia mater def: "The innermost of the three mammalian meninges covering the brain and spinal cord." [http://medical-dictionary.thefreedictionary.com/pia+mater "adapted from"] relationship: part_of VHOG:0000013 ! brain meninges [Term] id: VHOG:0000472 name: mantle layer cerebral cortex relationship: part_of VHOG:0000722 ! cerebral cortex [Term] id: VHOG:0000473 name: marginal layer cerebral cortex relationship: part_of VHOG:0000722 ! cerebral cortex [Term] id: VHOG:0000474 name: ventricular layer cerebral cortex relationship: part_of VHOG:0000722 ! cerebral cortex [Term] id: VHOG:0000475 name: diencephalon pia mater def: "Pia mater that is part of the diencephalon." [Bgee:curator "Bgee"] is_a: VHOG:0000470 ! brain pia mater relationship: part_of VHOG:0000009 ! diencephalon meninges [Term] id: VHOG:0000476 name: telencephalon pia mater def: "Pia mater that is part of the telencephalon." [Bgee:curator "Bgee"] is_a: VHOG:0000470 ! brain pia mater relationship: part_of VHOG:0000010 ! telencephalon meninges [Term] id: VHOG:0000478 name: crus commune epithelium relationship: part_of VHOG:0001344 ! crus commune [Term] id: VHOG:0000480 name: lateral semicircular canal epithelium relationship: part_of VHOG:0000247 ! lateral semicircular duct [Term] id: VHOG:0000482 name: right lung hilus def: "The part of the right lung that is not covered by pleura and through which blood vessels, bronchi, nerves and lymphatics enter and leave the lung." [http://medical-dictionary.thefreedictionary.com/lung+hilus "adapted from"] relationship: part_of VHOG:0000301 ! right lung [Term] id: VHOG:0000483 name: left lung hilus def: "The part of the left lung that is not covered by pleura and through which blood vessels, bronchi, nerves and lymphatics enter and leave the lung." [http://medical-dictionary.thefreedictionary.com/lung+hilus "adapted from"] relationship: part_of VHOG:0000618 ! left lung [Term] id: VHOG:0000484 name: left dorsal aorta is_a: VHOG:0000264 ! dorsal aorta [Term] id: VHOG:0000485 name: right dorsal aorta is_a: VHOG:0000264 ! dorsal aorta [Term] id: VHOG:0000488 name: sinus venosus left horn relationship: part_of VHOG:0000177 ! sinus venosus [Term] id: VHOG:0000489 name: sinus venosus right horn relationship: part_of VHOG:0000177 ! sinus venosus [Term] id: VHOG:0000490 name: optic cup inner layer relationship: part_of VHOG:0000167 ! optic cup [Term] id: VHOG:0000492 name: optic cup outer layer relationship: part_of VHOG:0000167 ! optic cup [Term] id: VHOG:0000494 name: extraembryonic right vitelline vein is_a: VHOG:0000014 ! extraembryonic vitelline vein [Term] id: VHOG:0000495 name: extraembryonic left vitelline vein is_a: VHOG:0000014 ! extraembryonic vitelline vein [Term] id: VHOG:0000496 name: embryonic left vitelline vein is_a: VHOG:0000401 ! embryonic vitelline vein [Term] id: VHOG:0000497 name: embryonic right vitelline vein is_a: VHOG:0000401 ! embryonic vitelline vein [Term] id: VHOG:0000498 name: mesonephros associated mesenchyme relationship: part_of VHOG:0000038 ! mesonephros [Term] id: VHOG:0000499 name: mesonephros non-tubular part relationship: part_of VHOG:0000038 ! mesonephros [Term] id: VHOG:0000500 name: mesonephric tubule def: "Any of the renal tubules composing the mesonephros. In mammals they function as excretory structures during the early embryonic development but are later incorporated into the reproductive system." [http://medical-dictionary.thefreedictionary.com/mesonephric+tubule "adapted from"] xref: TAO:0001287 relationship: part_of VHOG:0000038 ! mesonephros [Term] id: VHOG:0000501 name: nasal epithelium synonym: "nasal cavity epithelium" RELATED [] synonym: "nasal mucosa" RELATED [] is_a: VHOG:0000981 ! respiratory epithelium relationship: part_of VHOG:0000271 ! nasal cavity [Term] id: VHOG:0000507 name: cochlear duct def: "The coiled portion of the membranous labyrinth located inside the cochlea. It contains endolymph." [http://medical-dictionary.thefreedictionary.com/cochlear+duct] synonym: "lagena" RELATED [] xref: TAO:0000374 relationship: part_of VHOG:0000691 ! cochlea [Term] id: VHOG:0000508 name: liver caudate lobe def: "The portion of the right lobe of the liver between the fissure of the ligamentum venosum and the bare area of the liver. It ends into the superior recess of the lesser peritoneal sac." [ISBN:978-0828893114] synonym: "liver caudate process" RELATED [] is_a: VHOG:0001424 ! liver right lobe [Term] id: VHOG:0000509 name: liver quadrate lobe def: "The portion of the right lobe of the liver between the gall bladder, the porta hepatis, the round ligament and the lower margin of the organ." [ISBN:978-0828893114] is_a: VHOG:0001424 ! liver right lobe [Term] id: VHOG:0000510 name: ventral pharyngeal arch 1 def: "The ventral portion of the first pharyngeal arch, comprising the lower jaw." [ZFA:0001273] synonym: "ventral mandibular arch" RELATED [] synonym: "ventral visceral arch 1" RELATED [] xref: TAO:0001273 relationship: part_of VHOG:0000280 ! oral region relationship: part_of VHOG:0000296 ! pharyngeal arch 1 relationship: part_of VHOG:0000315 ! viscerocranium [Term] id: VHOG:0000511 name: dorsal pharyngeal arch 1 def: "The dorsal portion of the first pharyngeal arch, comprising the upper jaw." [ZFA:0001272] synonym: "dorsal mandibular arch" RELATED [] synonym: "dorsal visceral arch 1" RELATED [] xref: TAO:0001272 relationship: part_of VHOG:0000280 ! oral region relationship: part_of VHOG:0000296 ! pharyngeal arch 1 relationship: part_of VHOG:0000315 ! viscerocranium [Term] id: VHOG:0000513 name: lateral wall spinal cord xref: TAO:0000996 relationship: part_of VHOG:0000601 ! spinal cord [Term] id: VHOG:0000515 name: thoracic sympathetic ganglion is_a: VHOG:0000156 ! ganglion [Term] id: VHOG:0000516 name: embryonic left umbilical vein is_a: VHOG:0000400 ! embryonic umbilical vein [Term] id: VHOG:0000517 name: embryonic right umbilical vein is_a: VHOG:0000400 ! embryonic umbilical vein [Term] id: VHOG:0000522 name: embryonic left umbilical artery is_a: VHOG:0000599 ! embryonic umbilical artery [Term] id: VHOG:0000523 name: embryonic right umbilical artery is_a: VHOG:0000599 ! embryonic umbilical artery [Term] id: VHOG:0000527 name: primordial germ cell def: "Primitive cell type that is involved in the reproduction of the organism." [XAO:0003149 "adapted from"] synonym: "PGC" RELATED [] synonym: "primitive germ cell" RELATED [] xref: TAO:0009288 is_a: VHOG:0001533 ! cell relationship: part_of VHOG:0000397 ! gonad relationship: part_of VHOG:0000830 ! yolk sac [Term] id: VHOG:0000528 name: greater sac cavity relationship: part_of VHOG:0000858 ! greater sac [Term] id: VHOG:0000531 name: lens vesicle cavity relationship: part_of VHOG:0001163 ! lens vesicle [Term] id: VHOG:0000532 name: lens vesicle epithelium relationship: part_of VHOG:0001163 ! lens vesicle [Term] id: VHOG:0000534 name: intraretinal space def: "The space separating the outer pigment epithelium and the inner neural retina of the optic cup and of the retina." [http://medical-dictionary.thefreedictionary.com/intraretinal+space] relationship: part_of VHOG:0000229 ! retina [Term] id: VHOG:0000535 name: neural retinal epithelium synonym: "neural retina" RELATED [] synonym: "neuroretina" RELATED [] synonym: "retinal neural layer" RELATED [] xref: TAO:0000046 relationship: part_of VHOG:0000165 ! optic vesicle relationship: part_of VHOG:0000229 ! retina [Term] id: VHOG:0000536 name: pigmented retinal epithelium def: "A monolayer of pigmented epithelium covering the neural retina; develops from the outer of the two layers of the optic cup." [ZFA:0000144] synonym: "pigmented epithelium" RELATED [] synonym: "pigmented retina" RELATED [] synonym: "PRE" RELATED [] synonym: "retinal pigment layer" RELATED [] synonym: "RPE" RELATED [] xref: TAO:0000064 xref: TAO:0000144 is_a: VHOG:0000387 ! epithelium relationship: part_of VHOG:0000165 ! optic vesicle relationship: part_of VHOG:0000229 ! retina [Term] id: VHOG:0000537 name: parietal pericardium is_a: VHOG:0001280 ! pericardium [Term] id: VHOG:0000538 name: visceral pericardium is_a: VHOG:0001280 ! pericardium [Term] id: VHOG:0000539 name: liver parenchyma synonym: "hepatic parenchyma" RELATED [] synonym: "hepatic parenchyme" RELATED [] synonym: "liver parenchyme" RELATED [] relationship: part_of VHOG:0000257 ! liver [Term] id: VHOG:0000540 name: metanephric mesenchyme def: "A mass of intermediate mesodermal cells around the distal end of the ureteric bud that gives rise to nephrons in the metanephric kidney." [http://medical-dictionary.thefreedictionary.com/metanephric+mesenchyme "adapted from"] synonym: "metanephric blastema" RELATED [] synonym: "metanephrogenic mesenchyme" RELATED [] is_a: VHOG:0000170 ! mesenchyme relationship: part_of VHOG:0000039 ! metanephros [Term] id: VHOG:0000541 name: ureteric bud def: "Outgrowth of the mesonephric duct that penetrates the metanephric mesoderm and forms the ureter, renal pelvis, major and minor calyces and collecting ducts." [ISBN:978-0781755696 "p.1"] synonym: "ureteric diverticulum" RELATED [] relationship: part_of VHOG:0000039 ! metanephros [Term] id: VHOG:0000543 name: optic II nerve def: "Cranial nerve which is comprised of retinal ganglion cell axons running posterior medially towards the optic chiasm, at which some of the axons cross the midline and after which the structure is termed the optic tract." [ZFA:0000435] synonym: "CN-II" RELATED [] synonym: "cranial nerve II" RELATED [] xref: TAO:0000435 is_a: VHOG:0000279 ! cranial nerve relationship: part_of VHOG:0000223 ! optic stalk [Term] id: VHOG:0000544 name: external naris def: "Surface structure that provides one of the small external openings of the head that give passage to air or water." [XAO:0003033 "adapted from"] synonym: "anterior naris" RELATED [] synonym: "nostril" RELATED [] xref: TAO:0001427 is_a: VHOG:0000663 ! naris [Term] id: VHOG:0000545 name: choana def: "One of the paired openings from the nasal cavities into the pharynx." [ISBN:978-0030223693 "Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) Glossary G-6"] synonym: "choanae" RELATED [] synonym: "internal naris" RELATED [] synonym: "posterior naris" RELATED [] is_a: VHOG:0000663 ! naris relationship: part_of VHOG:0000271 ! nasal cavity [Term] id: VHOG:0000546 name: conus medullaris def: "The conical end of the spinal cord, which continues with the filum terminale." [ISBN:978-0828893114] relationship: part_of VHOG:0000601 ! spinal cord [Term] id: VHOG:0000547 name: filum terminale def: "The slender, thread-like continuation of the spinal cord below the origin of the lumbar nerves." [ISBN:978-0828893114] relationship: part_of VHOG:0000601 ! spinal cord [Term] id: VHOG:0000548 name: aqueous humour def: "The fluid produced by the ciliary process in the eye and occupying the anterior and posterior chambers. It provides nourishment for the lens and cornea and maintains the ocular pressure, and hence the optical integrity of the eyeball." [http://medical-dictionary.thefreedictionary.com/aqueous+humour] synonym: "aqueous humor" RELATED [] is_a: VHOG:0001726 ! portion of organism substance relationship: part_of VHOG:0001431 ! eye anterior chamber [Term] id: VHOG:0000549 name: extraocular skeletal muscle def: "Any of the six small muscles that control movement of the eyeball within the socket." [http://medical-dictionary.thefreedictionary.com/extraocular+muscle] synonym: "extraocular musculature" RELATED [] synonym: "extrinsic ocular muscle" RELATED [] xref: TAO:0000511 is_a: VHOG:0000319 ! skeletal muscle relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0000550 name: lens capsule def: "The transparent membrane which surrounds the lens of the eye." [ISBN:978-0828893114] relationship: part_of VHOG:0000169 ! lens relationship: part_of VHOG:0001163 ! lens vesicle [Term] id: VHOG:0000551 name: optic disc def: "The small blind spot on the surface of the retina. It is the point where the fibers of the retina leave the eye and become part of the optic nerve." [http://medical-dictionary.thefreedictionary.com/optic+disc] relationship: part_of VHOG:0000229 ! retina [Term] id: VHOG:0000554 name: 1st pharyngeal groove ectoderm relationship: part_of VHOG:0000969 ! 1st pharyngeal groove [Term] id: VHOG:0000555 name: 1st pharyngeal pouch endoderm relationship: part_of VHOG:0000970 ! pharyngeal pouch 1 [Term] id: VHOG:0000556 name: pericardial cavity def: "Anatomical space in which the heart is located and is surrounded by the pericardium." [ZFA:0001655] xref: TAO:0002220 is_a: VHOG:0001728 ! anatomical space relationship: part_of VHOG:0000316 ! intraembryonic coelom [Term] id: VHOG:0000557 name: somatopleure relationship: part_of VHOG:0000118 ! lateral plate mesoderm [Term] id: VHOG:0000558 name: splanchnopleure relationship: part_of VHOG:0000118 ! lateral plate mesoderm [Term] id: VHOG:0000559 name: presomitic mesoderm def: "Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form." [ZFA:0000279] synonym: "PSM" RELATED [] synonym: "segmental plate" RELATED [] synonym: "somitogenic mesoderm" RELATED [] synonym: "unsegmented mesenchyme" RELATED [] xref: TAO:0000053 xref: TAO:0000279 relationship: part_of VHOG:0000114 ! paraxial mesoderm [Term] id: VHOG:0000560 name: 2nd pharyngeal membrane endoderm relationship: part_of VHOG:0000877 ! 2nd pharyngeal membrane [Term] id: VHOG:0000561 name: 2nd pharyngeal pouch endoderm relationship: part_of VHOG:0000967 ! pharyngeal pouch 2 [Term] id: VHOG:0000563 name: 2nd pharyngeal arch mesenchyme derived from neural crest is_a: VHOG:0001102 ! 2nd pharyngeal arch mesenchyme [Term] id: VHOG:0000564 name: cavity of the pericardio-peritoneal canal is_a: VHOG:0001728 ! anatomical space relationship: part_of VHOG:0001498 ! pericardio-peritoneal canal [Term] id: VHOG:0000565 name: septum transversum hepatic component relationship: part_of VHOG:0000019 ! septum transversum [Term] id: VHOG:0000566 name: septum transversum non-hepatic component relationship: part_of VHOG:0000019 ! septum transversum [Term] id: VHOG:0000568 name: 2nd pharyngeal groove ectoderm relationship: part_of VHOG:0000972 ! 2nd pharyngeal groove [Term] id: VHOG:0000569 name: 2nd pharyngeal membrane ectoderm relationship: part_of VHOG:0000877 ! 2nd pharyngeal membrane [Term] id: VHOG:0000571 name: 3rd pharyngeal arch mesenchyme derived from neural crest is_a: VHOG:0001083 ! 3rd pharyngeal arch mesenchyme [Term] id: VHOG:0000572 name: 3rd pharyngeal groove ectoderm relationship: part_of VHOG:0000973 ! 3rd pharyngeal groove [Term] id: VHOG:0000573 name: 3rd pharyngeal membrane ectoderm relationship: part_of VHOG:0000876 ! 3rd pharyngeal membrane [Term] id: VHOG:0000574 name: 3rd pharyngeal membrane endoderm relationship: part_of VHOG:0000876 ! 3rd pharyngeal membrane [Term] id: VHOG:0000577 name: 4th pharyngeal groove ectoderm relationship: part_of VHOG:0000968 ! 4th pharyngeal groove [Term] id: VHOG:0000578 name: 4th pharyngeal pouch endoderm relationship: part_of VHOG:0000971 ! pharyngeal pouch 4 [Term] id: VHOG:0000580 name: 4th pharyngeal arch mesenchyme derived from neural crest is_a: VHOG:0001052 ! 4th pharyngeal arch mesenchyme [Term] id: VHOG:0000581 name: pleural cavity is_a: VHOG:0001728 ! anatomical space relationship: part_of VHOG:0000316 ! intraembryonic coelom [Term] id: VHOG:0000582 name: vertebral pre-cartilage condensation relationship: part_of VHOG:0000317 ! axial skeleton [Term] id: VHOG:0000583 name: undifferentiated genital tubercle def: "The eminence in the embryo which develops into the clitoris or penis." [http://medical-dictionary.thefreedictionary.com/genital+tubercle] relationship: part_of VHOG:0000182 ! reproductive system [Term] id: VHOG:0000584 name: vertebral cartilage condensation relationship: part_of VHOG:0000317 ! axial skeleton [Term] id: VHOG:0000592 name: mouth-foregut junction relationship: part_of VHOG:0000412 ! alimentary system [Term] id: VHOG:0000595 name: optic recess def: "The optic recess of the third ventricle, i.e. the pouch of the ventricle penetrating into the interval between the initial optic tracts." [ISBN:978-0828893114] xref: TAO:0000049 relationship: part_of VHOG:0000007 ! third ventricle relationship: part_of VHOG:0000283 ! telencephalon [Term] id: VHOG:0000596 name: lateral wall diencephalon xref: TAO:0000780 relationship: part_of VHOG:0000318 ! diencephalon [Term] id: VHOG:0000597 name: mural trophectoderm def: "The part of the trophectoderm which surrounds the blastocoelic cavity." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.10"] synonym: "mural trophoblast" RELATED [] is_a: VHOG:0000979 ! trophectoderm [Term] id: VHOG:0000598 name: organizer synonym: "DMZ" RELATED [] synonym: "dorsal marginal zone" RELATED [] synonym: "node" RELATED [] synonym: "shield" RELATED [] xref: TAO:0000071 xref: TAO:0001121 relationship: part_of VHOG:0001202 ! primitive streak - blastopore - germ ring [Term] id: VHOG:0000599 name: embryonic umbilical artery def: "Each of the two arteries arising from the hypogastric arteries of the fetus and passing throught the umbilical cord to the placenta." [ISBN:978-0828893114] relationship: part_of VHOG:0000273 ! arterial system [Term] id: VHOG:0000601 name: spinal cord def: "Elongated, approximately cylindrical part of the central nervous system that lies in the vertebral canal and from which the spinal nerves emerge." [XAO:0000020] xref: TAO:0000075 xref: TAO:0000417 relationship: part_of VHOG:0000293 ! central nervous system relationship: part_of VHOG:0001201 ! posterior neural plate [Term] id: VHOG:0000602 name: atrium myocardium def: "Myocardium that is part of the atrium." [Bgee:curator "Bgee"] synonym: "atrial myocardium" RELATED [] synonym: "atrium cardiac muscle" RELATED [] xref: TAO:0001374 is_a: VHOG:0000083 ! heart myocardium relationship: part_of VHOG:0000175 ! heart atrium [Term] id: VHOG:0000603 name: outflow tract myocardium def: "Myocardium that is part of the outflow tract." [Bgee:curator "Bgee"] synonym: "outflow tract cardiac muscle" RELATED [] is_a: VHOG:0001245 ! muscle relationship: part_of VHOG:0000670 ! outflow tract [Term] id: VHOG:0000604 name: ventricle myocardium def: "Muscular layer of the cardiac ventricle composed of a compact myocardial layer surrounding the trabecular layer." [ZFA:0005061] synonym: "ventricle cardiac muscle" RELATED [] synonym: "ventricular myocardium" RELATED [] xref: TAO:0005061 is_a: VHOG:0000083 ! heart myocardium relationship: part_of VHOG:0000435 ! heart ventricle [Term] id: VHOG:0000605 name: ureter def: "The duct of amniotes that carries urine from a metanephric kidney to the urinary bladder." [ISBN:978-0030223693 "Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) Glossary G-29"] synonym: "metanephric duct" RELATED [] relationship: part_of VHOG:0000039 ! metanephros [Term] id: VHOG:0000606 name: atrium endocardium def: "Endocardium that is part of the atrium." [ZFA:0001614] synonym: "atrial endocardium" RELATED [] synonym: "atrium endocardial tissue" RELATED [] xref: TAO:0002169 is_a: VHOG:0000084 ! heart endocardium relationship: part_of VHOG:0000175 ! heart atrium [Term] id: VHOG:0000607 name: ventricle endocardium def: "Endocardium that is part of the cardiac ventricle." [ZFA:0001615] synonym: "ventricle endocardial tissue" RELATED [] synonym: "ventricular endocardium" RELATED [] xref: TAO:0002247 is_a: VHOG:0000084 ! heart endocardium relationship: part_of VHOG:0000435 ! heart ventricle [Term] id: VHOG:0000609 name: bulbus cordis myocardium def: "Myocardium that is part of the bulbus cordis." [Bgee:curator "Bgee"] synonym: "bulbus cordis cardiac muscle" RELATED [] relationship: part_of VHOG:0000436 ! bulbus cordis caudal half relationship: part_of VHOG:0000437 ! bulbus cordis rostral half [Term] id: VHOG:0000611 name: right auricular region myocardium def: "Myocardium that is part of the right auricular region." [Bgee:curator "Bgee"] synonym: "right auricular region cardiac muscle" RELATED [] relationship: part_of VHOG:0001232 ! right auricle [Term] id: VHOG:0000612 name: bulbus cordis caudal half endocardium def: "Endocardium that is part of the bulbus cordis caudal half." [Bgee:curator "Bgee"] synonym: "bulbus cordis caudal half endocardial tissue" RELATED [] relationship: part_of VHOG:0000436 ! bulbus cordis caudal half [Term] id: VHOG:0000614 name: right auricular region endocardium def: "Endocardium that is part of the right auricular region." [Bgee:curator "Bgee"] synonym: "right auricuar region endocardial tissue" RELATED [] relationship: part_of VHOG:0001232 ! right auricle [Term] id: VHOG:0000615 name: interventricular septum endocardium def: "Endocardium that is part of the interventricular septum." [Bgee:curator "Bgee"] synonym: "interventricular septum endocardial tissue" RELATED [] relationship: part_of VHOG:0000386 ! interventricular septum [Term] id: VHOG:0000616 name: extraembryonic mesoderm is_a: VHOG:0000292 ! extraembryonic structure [Term] id: VHOG:0000618 name: left lung relationship: part_of VHOG:0000310 ! lung - swim bladder [Term] id: VHOG:0000628 name: neural fold spinal cord def: "Neural fold that is part of the spinal cord." [Bgee:curator "Bgee"] relationship: part_of VHOG:0000601 ! spinal cord [Term] id: VHOG:0000634 name: utricle epithelium synonym: "utriculus epithelium" RELATED [] relationship: part_of VHOG:0000289 ! utricle [Term] id: VHOG:0000635 name: 1st pharyngeal membrane epithelium relationship: part_of VHOG:0001427 ! 1st pharyngeal membrane [Term] id: VHOG:0000636 name: otic placode epithelium relationship: part_of VHOG:0000235 ! otic placode [Term] id: VHOG:0000637 name: lower eyelid epithelium relationship: part_of VHOG:0000388 ! lower eyelid [Term] id: VHOG:0000638 name: upper eyelid epithelium relationship: part_of VHOG:0000389 ! upper eyelid [Term] id: VHOG:0000639 name: labyrinth epithelium relationship: part_of VHOG:0000729 ! membranous labyrinth [Term] id: VHOG:0000640 name: cochlear duct epithelium relationship: part_of VHOG:0000507 ! cochlear duct [Term] id: VHOG:0000641 name: parasympathetic nerve relationship: part_of VHOG:0000755 ! parasympathetic nervous system [Term] id: VHOG:0000642 name: hepatic portal vein xref: TAO:0005090 is_a: VHOG:0001743 ! vein relationship: part_of VHOG:0000257 ! liver [Term] id: VHOG:0000643 name: telencephalic ventricle def: "Fluid-filled brain cavity." [ZFA:0000110 "adapted from"] synonym: "lateral ventricle" RELATED [] synonym: "telencephalic vesicle" RELATED [] xref: TAO:0000696 is_a: VHOG:0001728 ! anatomical space relationship: part_of VHOG:0000005 ! brain ventricular system relationship: part_of VHOG:0000283 ! telencephalon [Term] id: VHOG:0000644 name: prosencephalic vesicle synonym: "forebrain ventricle" RELATED [] synonym: "forebrain vesicle" RELATED [] xref: TAO:0001259 relationship: part_of VHOG:0000005 ! brain ventricular system relationship: part_of VHOG:0000383 ! forebrain [Term] id: VHOG:0000646 name: islet of Langerhans synonym: "endocrine pancreas" RELATED [] synonym: "pancreatic islet" RELATED [] relationship: part_of VHOG:0000049 ! endocrine pancreas relationship: part_of VHOG:0000448 ! pancreas head relationship: part_of VHOG:0000451 ! pancreas body relationship: part_of VHOG:0000452 ! pancreas tail [Term] id: VHOG:0000647 name: ileum relationship: part_of VHOG:0000055 ! small intestine [Term] id: VHOG:0000648 name: colon relationship: part_of VHOG:0000054 ! large intestine [Term] id: VHOG:0000649 name: midbrain-hindbrain boundary def: "The part of the brain that is the morphological boundary between the midbrain and hindbrain and that is the location of an organizing center which patterns the midbrain and hindbrain primordia of the neural plate." [XAO:0000016] synonym: "isthmo-cerebellar region" RELATED [] synonym: "isthmus" RELATED [] synonym: "MHB" RELATED [] xref: TAO:0000042 xref: TAO:0001187 relationship: part_of VHOG:0000157 ! brain [Term] id: VHOG:0000650 name: foregut gland relationship: part_of VHOG:0000285 ! foregut [Term] id: VHOG:0000651 name: foregut midgut junction gland relationship: part_of VHOG:0000291 ! foregut-midgut junction [Term] id: VHOG:0000652 name: oral region gland relationship: part_of VHOG:0000280 ! oral region [Term] id: VHOG:0000653 name: diencephalon gland relationship: part_of VHOG:0000318 ! diencephalon [Term] id: VHOG:0000654 name: integumental system gland relationship: part_of VHOG:0000403 ! integumental system [Term] id: VHOG:0000655 name: choroid fissure - optic fissure def: "A break in the continuity of the optic cup where the two sides of the cup meet." [XAO:0000474] xref: TAO:0001284 relationship: part_of VHOG:0000167 ! optic cup [Term] id: VHOG:0000657 name: thalamus def: "One of a pair of large oval nervous structures made of gray matter and forming most of the lateral walls of the third ventricle of the brain and part of the diencephalon." [http://medical-dictionary.thefreedictionary.com/thalamus] xref: TAO:0001215 relationship: part_of VHOG:0000318 ! diencephalon [Term] id: VHOG:0000658 name: stomatodaeum gland relationship: part_of VHOG:0001777 ! stomodeum [Term] id: VHOG:0000659 name: extraembryonic left umbilical vein is_a: VHOG:0000015 ! extraembryonic umbilical vein [Term] id: VHOG:0000660 name: extraembryonic right umbilical vein is_a: VHOG:0000015 ! extraembryonic umbilical vein [Term] id: VHOG:0000661 name: ovary primordial germ cells relationship: part_of VHOG:0000251 ! ovary [Term] id: VHOG:0000662 name: testis primordial germ cells is_a: VHOG:0001533 ! cell relationship: part_of VHOG:0000725 ! male reproductive system [Term] id: VHOG:0000663 name: naris xref: TAO:0000550 is_a: VHOG:0000287 ! olfactory organ [Term] id: VHOG:0000664 name: nasolacrimal duct - posterior naris xref: TAO:0001426 relationship: part_of VHOG:0000663 ! naris [Term] id: VHOG:0000665 name: vomeronasal organ def: "An organ thought to supplement the olfactory system in receiving pheromonic communication. The sensory part of the organ is in two long, thin sacs, situated on either side of the nasal septum at its base." [http://medical-dictionary.thefreedictionary.com/vomeronasal+organ] synonym: "Jacobson's organ" RELATED [] synonym: "organ of jacobsen" RELATED [] synonym: "organon vomeronasale" RELATED [] synonym: "VNO" RELATED [] is_a: VHOG:0000287 ! olfactory organ [Term] id: VHOG:0000666 name: female genital tubercle def: "The eminence in the embryo which develops into the clitoris." [Bgee:curator "Bgee"] relationship: part_of VHOG:0000726 ! female reproductive system [Term] id: VHOG:0000667 name: male genital tubercle def: "The eminence in the embryo which develops into the penis." [Bgee:curator "Bgee"] relationship: part_of VHOG:0000725 ! male reproductive system [Term] id: VHOG:0000670 name: outflow tract relationship: part_of VHOG:0000276 ! heart [Term] id: VHOG:0000671 name: whole organism def: "Anatomical structure that is an individual member of a species." [TAO:0001094] xref: CARO:0000012 xref: TAO:0001094 is_a: VHOG:0001759 ! anatomical structure [Term] id: VHOG:0000672 name: rhombomere def: "A segment of the developing hindbrain." [ZFA:0001064] xref: TAO:0001064 xref: TAO:0001207 xref: TAO:0001208 xref: TAO:0001209 xref: TAO:0001210 xref: TAO:0001211 xref: TAO:0001212 xref: TAO:0001213 xref: TAO:0001214 relationship: part_of VHOG:0000456 ! myelencephalon relationship: part_of VHOG:0000741 ! metencephalon [Term] id: VHOG:0000673 name: midgut loop relationship: part_of VHOG:0000290 ! midgut [Term] id: VHOG:0000674 name: Rathke's pouch def: "A depression that forms in the roof of the mouth of an embryo, anterior to the buccopharyngeal membrane. The walls of the diverticulum develop into the anterior lobe of the pituitary gland." [http://medical-dictionary.thefreedictionary.com/Rathke%27s+pouch] is_a: VHOG:0000141 ! adenohypophysis [Term] id: VHOG:0000675 name: bronchiole relationship: part_of VHOG:0000262 ! bronchus relationship: part_of VHOG:0000301 ! right lung relationship: part_of VHOG:0000618 ! left lung [Term] id: VHOG:0000676 name: dermomyotome def: "Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis." [ZFA:0001513] synonym: "dermamyotome" RELATED [] synonym: "dermatome" RELATED [] xref: TAO:0001513 is_a: VHOG:0000387 ! epithelium relationship: part_of VHOG:0000191 ! somite [Term] id: VHOG:0000677 name: lip xref: TAO:0007006 relationship: part_of VHOG:0000453 ! lower jaw relationship: part_of VHOG:0000454 ! upper jaw relationship: part_of VHOG:0000812 ! mouth [Term] id: VHOG:0000679 name: serratus anterior synonym: "serratus ventralis" RELATED [] is_a: VHOG:0001245 ! muscle [Term] id: VHOG:0000680 name: sclerotome def: "Somitic compartment that is a precursor of the axial skeleton." [XAO:0000397] xref: TAO:0000829 xref: TAO:0000830 xref: TAO:0000831 xref: TAO:0000832 xref: TAO:0000833 xref: TAO:0000834 xref: TAO:0000835 xref: TAO:0000836 xref: TAO:0000837 xref: TAO:0000839 xref: TAO:0000952 xref: TAO:0000953 xref: TAO:0000954 xref: TAO:0000955 xref: TAO:0000956 xref: TAO:0000958 xref: TAO:0000959 xref: TAO:0000960 xref: TAO:0000961 xref: TAO:0000962 xref: TAO:0001036 xref: TAO:0001037 xref: TAO:0001038 xref: TAO:0001039 xref: TAO:0001041 xref: TAO:0001042 xref: TAO:0001043 xref: TAO:0001044 xref: TAO:0001045 xref: TAO:0001046 xref: TAO:0001080 relationship: part_of VHOG:0000191 ! somite [Term] id: VHOG:0000682 name: vestibulocochlear VIII ganglion vestibular component synonym: "scarpa's ganglion" RELATED [] synonym: "vestibular ganglion" RELATED [] relationship: part_of VHOG:0000696 ! vestibulocochlear VIII ganglion [Term] id: VHOG:0000683 name: cytotrophoblast def: "A derivative layer of the trophoblast, the cells of which retain their boundaries and contribute to the extraembryonic mesoderm." [ISBN:978-0072528305 "Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.189"] relationship: part_of VHOG:0000200 ! chorion relationship: part_of VHOG:0000980 ! polar trophectoderm relationship: part_of VHOG:0001766 ! embryo [Term] id: VHOG:0000684 name: vagus X ganglion is_a: VHOG:0000076 ! cranial ganglion [Term] id: VHOG:0000685 name: vagus X inferior ganglion synonym: "nodose ganglion" RELATED [] relationship: part_of VHOG:0000684 ! vagus X ganglion [Term] id: VHOG:0000686 name: vagus X superior ganglion synonym: "jugular ganglion" RELATED [] relationship: part_of VHOG:0000684 ! vagus X ganglion [Term] id: VHOG:0000688 name: hyomandibula - stapes xref: TAO:0000672 is_a: VHOG:0000461 ! auditory ossicle relationship: part_of VHOG:0000297 ! pharyngeal arch 2 relationship: part_of VHOG:0000315 ! viscerocranium [Term] id: VHOG:0000689 name: quadrate - incus xref: TAO:0000621 is_a: VHOG:0000461 ! auditory ossicle relationship: part_of VHOG:0000511 ! dorsal pharyngeal arch 1 [Term] id: VHOG:0000690 name: anguloarticular - malleus xref: TAO:0000467 is_a: VHOG:0000461 ! auditory ossicle relationship: part_of VHOG:0000510 ! ventral pharyngeal arch 1 relationship: part_of VHOG:0001665 ! dermatocranium [Term] id: VHOG:0000691 name: cochlea def: "A spiral-shaped cavity in the petrous portion of the temporal bone of the inner ear, containing the nerve endings essential for hearing and forming one of the divisions of the labyrinth." [http://medical-dictionary.thefreedictionary.com/Cochlear+diseases] synonym: "lagena" RELATED [] relationship: part_of VHOG:0001219 ! osseus labyrinth [Term] id: VHOG:0000692 name: oculomotor III nerve def: "Cranial nerve that runs to the eye muscles." [XAO:0003090] synonym: "CN-III" RELATED [] synonym: "cranial nerve III" RELATED [] xref: TAO:0000405 is_a: VHOG:0000279 ! cranial nerve relationship: part_of VHOG:0001367 ! tegmentum [Term] id: VHOG:0000693 name: hypoglossal XII nerve def: "Cranial nerve that innervates muscles in the tongue." [ISBN:978-0030223693 "Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) Glossary G-14"] synonym: "CN-XII" RELATED [] synonym: "cranial nerve XII" RELATED [] is_a: VHOG:0000279 ! cranial nerve [Term] id: VHOG:0000694 name: trigeminal V ganglion def: "A prominent collection of touch-sensory neurons of the trigeminal or fifth cranial nerve, positioned beside the brain between the eye and the ear." [ZFA:0000295] synonym: "5th ganglion" RELATED [] synonym: "fifth ganglion" RELATED [] synonym: "Gasserian ganglion" RELATED [] synonym: "gV" RELATED [] synonym: "semilunar ganglion" RELATED [] synonym: "trigeminal ganglia" RELATED [] synonym: "trigeminus ganglion" RELATED [] xref: TAO:0000295 is_a: VHOG:0000076 ! cranial ganglion [Term] id: VHOG:0000695 name: vestibulocochlear VIII nerve def: "Cranial nerve that runs to the ear." [XAO:0003095] synonym: "auditory nerve" RELATED [] synonym: "CN-VIII" RELATED [] synonym: "cranial nerve VIII" RELATED [] synonym: "octaval nerve" RELATED [] synonym: "statoacoustic nerve" RELATED [] xref: TAO:0000247 is_a: VHOG:0000279 ! cranial nerve relationship: part_of VHOG:0001674 ! sensory system [Term] id: VHOG:0000696 name: vestibulocochlear VIII ganglion def: "The sensory ganglion of the ear." [ZFA:0000588] synonym: "acoustic ganglion" RELATED [] synonym: "auditory ganglion" RELATED [] synonym: "gVIII" RELATED [] synonym: "sag" RELATED [] synonym: "statoacoustic ganglia" RELATED [] synonym: "statoacoustic VIII ganglion" RELATED [] xref: TAO:0000588 relationship: part_of VHOG:0000330 ! ear relationship: part_of VHOG:0000715 ! facio-acoustic VII-VIII ganglion complex [Term] id: VHOG:0000697 name: abducens VI nerve def: "Cranial nerve, also known as the abducent nerve, that runs to the eye muscles." [XAO:0003093] synonym: "abducent nerve" RELATED [] synonym: "CN-VI" RELATED [] synonym: "cranial nerve VI" RELATED [] synonym: "nervus abducens" RELATED [] xref: TAO:0000310 is_a: VHOG:0000279 ! cranial nerve [Term] id: VHOG:0000698 name: tensor tympani muscle relationship: part_of VHOG:0000284 ! inner ear relationship: part_of VHOG:0000312 ! middle ear [Term] id: VHOG:0000699 name: accessory XI nerve def: "Cranial nerve that innervates the sternocleidomastoid and trapezius complex of muscles." [ISBN:978-0030223693 "Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) Glossary G-1"] synonym: "CN-XI" RELATED [] synonym: "cranial nerve XI" RELATED [] is_a: VHOG:0000279 ! cranial nerve [Term] id: VHOG:0000700 name: clitoris relationship: part_of VHOG:0001458 ! vulva [Term] id: VHOG:0000701 name: glossopharyngeal IX nerve synonym: "CN-IX" RELATED [] synonym: "cranial nerve IX" RELATED [] synonym: "nervus glossopharyngeus" RELATED [] xref: TAO:0000668 is_a: VHOG:0000279 ! cranial nerve relationship: part_of VHOG:0001674 ! sensory system [Term] id: VHOG:0000702 name: glossopharyngeal IX ganglion synonym: "gIX" RELATED [] synonym: "petrosal ganglion" RELATED [] xref: TAO:0001301 is_a: VHOG:0000076 ! cranial ganglion [Term] id: VHOG:0000703 name: olfactory I nerve def: "Cranial nerve that supplies the nasal organ." [XAO:0000426] synonym: "CN-I" RELATED [] synonym: "cranial nerve I" RELATED [] xref: TAO:0000249 is_a: VHOG:0000279 ! cranial nerve relationship: part_of VHOG:0001674 ! sensory system [Term] id: VHOG:0000704 name: trigeminal V nerve def: "Cranial nerve that branches into the ophthalmic (supplying the skin of the nose and upper jaw) and the mandibular (supplying the lower jaw)." [XAO:0003092] synonym: "CN-V" RELATED [] synonym: "cranial nerve V" RELATED [] xref: TAO:0000697 is_a: VHOG:0000279 ! cranial nerve [Term] id: VHOG:0000705 name: trochlear IV nerve def: "Cranial nerve, also known as the pathetic nerve, that runs to the eye muscles." [XAO:0003091] synonym: "CN-IV" RELATED [] synonym: "cranial nerve IV" RELATED [] synonym: "pathetic nerve" RELATED [] xref: TAO:0000600 is_a: VHOG:0000279 ! cranial nerve relationship: part_of VHOG:0001367 ! tegmentum [Term] id: VHOG:0000706 name: facial VII nerve synonym: "CN-VII" RELATED [] synonym: "cranial nerve VII" RELATED [] synonym: "nervus facialis" RELATED [] xref: TAO:0000664 is_a: VHOG:0000279 ! cranial nerve relationship: part_of VHOG:0001674 ! sensory system [Term] id: VHOG:0000707 name: facial VII ganglion synonym: "geniculate ganglion" RELATED [] synonym: "gVII" RELATED [] xref: TAO:0001291 relationship: part_of VHOG:0000715 ! facio-acoustic VII-VIII ganglion complex [Term] id: VHOG:0000708 name: hepatic sinusoid def: "Wide thin-walled blood vessels in the liver. In mammals they have neither veinous or arterial markers." [ZFA:0005091] synonym: "liver sinusoid" RELATED [] xref: TAO:0005091 relationship: part_of VHOG:0000257 ! liver relationship: part_of VHOG:0000302 ! cardiovascular system [Term] id: VHOG:0000709 name: left lobe hepatic sinusoids relationship: part_of VHOG:0001423 ! liver left lobe [Term] id: VHOG:0000710 name: right lobe hepatic sinusoids relationship: part_of VHOG:0001424 ! liver right lobe [Term] id: VHOG:0000711 name: caudate lobe hepatic sinusoids relationship: part_of VHOG:0000508 ! liver caudate lobe [Term] id: VHOG:0000712 name: quadrate lobe hepatic sinusoids relationship: part_of VHOG:0000509 ! liver quadrate lobe [Term] id: VHOG:0000713 name: diaphragm def: "A musculomembranous partition separating the abdominal and thoraic cavities and functioning in respiration." [http://medical-dictionary.thefreedictionary.com/diaphragm] is_a: VHOG:0000319 ! skeletal muscle relationship: part_of VHOG:0000202 ! respiratory system relationship: part_of VHOG:0000316 ! intraembryonic coelom [Term] id: VHOG:0000714 name: metanephros cortex relationship: part_of VHOG:0000039 ! metanephros [Term] id: VHOG:0000715 name: facio-acoustic VII-VIII ganglion complex is_a: VHOG:0000076 ! cranial ganglion [Term] id: VHOG:0000717 name: heart right ventricle def: "The muscular chamber on the right and in front of the left ventricle. It generally receives venous blood from the right atrium and conveys it into the pulmonary artery." [ISBN:978-0828893114] is_a: VHOG:0000435 ! heart ventricle [Term] id: VHOG:0000718 name: heart left ventricle def: "Thick-walled muscular chamber constituting the left border and apex of the heart. It receives oxygenated blood from the left atrium through the mitral orifice and send it off into the aorta." [ISBN:978-0828893114] is_a: VHOG:0000435 ! heart ventricle [Term] id: VHOG:0000719 name: metanephric nephron relationship: part_of VHOG:0000714 ! metanephros cortex [Term] id: VHOG:0000720 name: zona pellucida - vitelline membrane is_a: VHOG:0000292 ! extraembryonic structure relationship: part_of VHOG:0000251 ! ovary relationship: part_of VHOG:0000745 ! zygote [Term] id: VHOG:0000721 name: amnion def: "A thin, membranous sac filled with a watery fluid (called the amniotic fluid) in which the embryo or fetus of a reptile, bird, or mammal is suspended during prenatal development." [http://www.thefreedictionary.com/amnion] is_a: VHOG:0000292 ! extraembryonic structure relationship: part_of VHOG:0000726 ! female reproductive system [Term] id: VHOG:0000722 name: cerebral cortex relationship: part_of VHOG:0001639 ! cerebral hemisphere [Term] id: VHOG:0000723 name: renal system synonym: "excretory system" RELATED [] synonym: "renal/urinary system" RELATED [] synonym: "urinary system" RELATED [] xref: TAO:0000163 is_a: VHOG:0001725 ! anatomical system relationship: part_of VHOG:0000286 ! urogenital system [Term] id: VHOG:0000725 name: male reproductive system synonym: "male reproductive tract" RELATED [] is_a: VHOG:0000182 ! reproductive system [Term] id: VHOG:0000726 name: female reproductive system synonym: "female reproductive tract" RELATED [] is_a: VHOG:0000182 ! reproductive system [Term] id: VHOG:0000727 name: penis relationship: part_of VHOG:0000725 ! male reproductive system [Term] id: VHOG:0000728 name: phrenic nerve def: "A nerve that arises from the caudal cervical nerves and is primarily the motor nerve of the diaphragm but also sends sensory fibers to the pericardium." [http://medical-dictionary.thefreedictionary.com/phrenic+nerve] is_a: VHOG:0000824 ! spinal nerve [Term] id: VHOG:0000729 name: membranous labyrinth def: "A system of communicating epithelial sacs and ducts within the bony labyrinth, containing the endolymph." [http://medical-dictionary.thefreedictionary.com/membranous+labyrinth] relationship: part_of VHOG:0000284 ! inner ear [Term] id: VHOG:0000730 name: median lingual swelling is_a: VHOG:0000449 ! lingual swelling [Term] id: VHOG:0000731 name: lateral lingual swelling is_a: VHOG:0000449 ! lingual swelling [Term] id: VHOG:0000732 name: thyroid lobe relationship: part_of VHOG:0000418 ! thyroid [Term] id: VHOG:0000733 name: right thyroid lobe is_a: VHOG:0000732 ! thyroid lobe [Term] id: VHOG:0000734 name: left thyroid lobe is_a: VHOG:0000732 ! thyroid lobe [Term] id: VHOG:0000735 name: urachus def: "A fetal canal connecting the bladder with the allantois, persisting throughout life as a cord (median umbilical ligament)." [http://medical-dictionary.thefreedictionary.com/urachus] is_a: VHOG:0000414 ! urogenital sinus relationship: part_of VHOG:0000740 ! urinary bladder [Term] id: VHOG:0000736 name: vagal X nerve trunk is_a: VHOG:0000641 ! parasympathetic nerve [Term] id: VHOG:0000737 name: vagus X nerve synonym: "CN-X" RELATED [] synonym: "cranial nerve X" RELATED [] synonym: "vagal nerve" RELATED [] xref: TAO:0000453 is_a: VHOG:0000279 ! cranial nerve relationship: part_of VHOG:0001674 ! sensory system [Term] id: VHOG:0000738 name: allantois def: "A membranous sac that develops from the posterior part of the alimentary canal in the embryos of mammals, birds, and reptiles, and it is important in the formation of the umbilical cord and placenta in mammals." [http://medical-dictionary.thefreedictionary.com/allantois] relationship: part_of VHOG:0000459 ! hindgut relationship: part_of VHOG:0000616 ! extraembryonic mesoderm relationship: part_of VHOG:0001766 ! embryo [Term] id: VHOG:0000739 name: thyroid gland isthmus relationship: part_of VHOG:0000418 ! thyroid [Term] id: VHOG:0000740 name: urinary bladder def: "A saccular organ in which urine accumulates before discharge from the body." [ISBN:978-0030223693 "Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) Glossary G-29"] synonym: "bladder" RELATED [] relationship: part_of VHOG:0000723 ! renal system [Term] id: VHOG:0000741 name: metencephalon def: "The anterior of two brain vesicles formed by specialization of the rhombencephalon in the developing embryo. It gives rise to cerebellum and pons." [http://medical-dictionary.thefreedictionary.com/metencephalon] relationship: part_of VHOG:0000070 ! hindbrain [Term] id: VHOG:0000742 name: inner cell mass def: "A group of cells found in the mammalian blastocyst that give rise to the embryo." [http://www.biology-online.org/dictionary/Inner_cell_mass] synonym: "ICM" RELATED [] relationship: part_of VHOG:0000726 ! female reproductive system relationship: part_of VHOG:0001766 ! embryo [Term] id: VHOG:0000743 name: glossopharyngeal IX inferior ganglion is_a: VHOG:0000702 ! glossopharyngeal IX ganglion [Term] id: VHOG:0000744 name: glossopharyngeal IX superior ganglion is_a: VHOG:0000702 ! glossopharyngeal IX ganglion [Term] id: VHOG:0000745 name: zygote synonym: "fertilized egg" RELATED [] synonym: "one-cell stage" RELATED [] is_a: VHOG:0001533 ! cell [Term] id: VHOG:0000746 name: thyroglossal duct def: "The thyroglossal duct is an embryological anatomical structure forming an open connection between the initial area of development of the thyroid gland and its final position." [http://en.wikipedia.org/wiki/Thyroglossal_duct] relationship: part_of VHOG:0000418 ! thyroid [Term] id: VHOG:0000748 name: intrinsic tongue muscle is_a: VHOG:0001390 ! tongue skeletal muscle [Term] id: VHOG:0000750 name: teres major is_a: VHOG:0000319 ! skeletal muscle relationship: part_of VHOG:0000343 ! forelimb stylopodium [Term] id: VHOG:0000751 name: definitive endoderm relationship: part_of VHOG:0000154 ! embryonic endoderm [Term] id: VHOG:0000753 name: ventricular layer alar plate metencephalon relationship: part_of VHOG:0000306 ! alar plate metencephalon [Term] id: VHOG:0000755 name: parasympathetic nervous system xref: TAO:0001575 relationship: part_of VHOG:0000396 ! autonomic nervous system [Term] id: VHOG:0000757 name: pleuroperitoneal fold synonym: "pleuroperitoneal membrane" RELATED [] relationship: part_of VHOG:0000713 ! diaphragm [Term] id: VHOG:0000758 name: posterior semicircular canal epithelium relationship: part_of VHOG:0000248 ! posterior semicircular duct [Term] id: VHOG:0000761 name: shoulder epithelium relationship: part_of VHOG:0000342 ! shoulder [Term] id: VHOG:0000762 name: ventricular layer lateral wall telencephalon relationship: part_of VHOG:0000023 ! telencephalon lateral wall [Term] id: VHOG:0000763 name: marginal layer lateral wall neural tube relationship: part_of VHOG:0000513 ! lateral wall spinal cord [Term] id: VHOG:0000764 name: anterior abdominal wall relationship: part_of VHOG:0001275 ! musculoskeletal system [Term] id: VHOG:0000767 name: extraembryonic cavities is_a: VHOG:0000292 ! extraembryonic structure [Term] id: VHOG:0000768 name: rostral neuropore def: "Anterior site of neural tube closure." [ISBN:978-0072528305 "Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.378"] synonym: "anterior neuropore" RELATED [] relationship: part_of VHOG:0000773 ! roof plate prosencephalon [Term] id: VHOG:0000769 name: caudal neuropore def: "Posterior site of neural tube closure." [ISBN:978-0072528305 "Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.378"] synonym: "posterior neuropore" RELATED [] relationship: part_of VHOG:0000601 ! spinal cord [Term] id: VHOG:0000770 name: roof plate metencephalon def: "Roof plate that is part of the metencephalon." [Bgee:curator "Bgee"] synonym: "roofplate medulla metencephalon" RELATED [] is_a: VHOG:0001762 ! multi-tissue structure relationship: part_of VHOG:0000741 ! metencephalon [Term] id: VHOG:0000771 name: roof plate diencephalon def: "Roof plate that is part of the diencephalon." [Bgee:curator "Bgee"] synonym: "roofplate medulla diencephalon" RELATED [] xref: TAO:0001358 is_a: VHOG:0001762 ! multi-tissue structure relationship: part_of VHOG:0000318 ! diencephalon [Term] id: VHOG:0000772 name: roof plate midbrain def: "Roof plate that is part of the midbrain." [Bgee:curator "Bgee"] synonym: "roof plate mesencephalon" RELATED [] synonym: "roofplate midbrain" RELATED [] xref: TAO:0000355 is_a: VHOG:0001762 ! multi-tissue structure relationship: part_of VHOG:0000069 ! midbrain [Term] id: VHOG:0000773 name: roof plate prosencephalon def: "Roof plate that is part of the prosencephalon." [Bgee:curator "Bgee"] synonym: "roofplate medulla prosencephalon" RELATED [] is_a: VHOG:0001762 ! multi-tissue structure relationship: part_of VHOG:0000383 ! forebrain [Term] id: VHOG:0000774 name: roof plate telencephalon def: "Roof plate that is part of the telencephalon." [Bgee:curator "Bgee"] synonym: "roofplate medulla telencephalon" RELATED [] is_a: VHOG:0001762 ! multi-tissue structure relationship: part_of VHOG:0000283 ! telencephalon [Term] id: VHOG:0000775 name: roof plate myelencephalon def: "Roof plate that is part of the myelencephalon." [Bgee:curator "Bgee"] synonym: "roofplate medulla myelencephalon" RELATED [] is_a: VHOG:0001762 ! multi-tissue structure relationship: part_of VHOG:0000456 ! myelencephalon [Term] id: VHOG:0000776 name: roof plate medulla oblongata def: "Roof plate that is part of the medulla oblongata." [Bgee:curator "Bgee"] synonym: "roofplate medulla oblongata" RELATED [] is_a: VHOG:0001762 ! multi-tissue structure relationship: part_of VHOG:0000181 ! medulla oblongata [Term] id: VHOG:0000777 name: roof plate spinal cord def: "Roof plate that is part of the spinal cord." [Bgee:curator "Bgee"] synonym: "roofplate spinal cord" RELATED [] synonym: "spinal cord roof" RELATED [] xref: TAO:0001177 is_a: VHOG:0001762 ! multi-tissue structure relationship: part_of VHOG:0000601 ! spinal cord [Term] id: VHOG:0000778 name: pericardial visceral mesothelium relationship: part_of VHOG:0001280 ! pericardium [Term] id: VHOG:0000779 name: hip epithelium relationship: part_of VHOG:0000346 ! hip [Term] id: VHOG:0000780 name: floor plate midbrain def: "Floor plate that is part of the midbrain." [ZFA:0001677] synonym: "floor plate mesencephalon" RELATED [] synonym: "floorplate midbrain" RELATED [] xref: TAO:0002196 relationship: part_of VHOG:0000069 ! midbrain [Term] id: VHOG:0000781 name: floor plate prosencephalon def: "Floor plate that is part of the prosencephalon." [Bgee:curator "Bgee"] synonym: "floorplate prosencephalon" RELATED [] relationship: part_of VHOG:0000383 ! forebrain [Term] id: VHOG:0000782 name: floor plate diencephalon def: "Floor plate that is part of the diencephalon." [Bgee:curator "Bgee"] synonym: "floorplate diencephalon" RELATED [] xref: TAO:0000871 relationship: part_of VHOG:0000318 ! diencephalon [Term] id: VHOG:0000783 name: floor plate telencephalon def: "Floor plate that is part of the telencephalon." [Bgee:curator "Bgee"] synonym: "floorplate telencephalon" RELATED [] xref: TAO:0000914 relationship: part_of VHOG:0000283 ! telencephalon [Term] id: VHOG:0000784 name: floor plate metencephalon def: "Floor plate that is part of the metencephalon." [Bgee:curator "Bgee"] synonym: "floorplate metencephalon" RELATED [] relationship: part_of VHOG:0000741 ! metencephalon [Term] id: VHOG:0000785 name: floor plate myelencephalon def: "Floor plate that is part of the myelencephalon." [Bgee:curator "Bgee"] synonym: "floorplate myelencephalon" RELATED [] relationship: part_of VHOG:0000456 ! myelencephalon [Term] id: VHOG:0000786 name: floor plate medulla oblongata def: "Floor plate that is part of the medulla oblongata." [Bgee:curator "Bgee"] synonym: "floorplate medulla oblongata" RELATED [] relationship: part_of VHOG:0000181 ! medulla oblongata [Term] id: VHOG:0000787 name: floor plate spinal cord def: "Floor plate that is part of the spinal cord." [Bgee:curator "Bgee"] synonym: "floorplate spinal cord" RELATED [] synonym: "spinal cord floor" RELATED [] xref: TAO:0000890 relationship: part_of VHOG:0000601 ! spinal cord [Term] id: VHOG:0000788 name: abdominal external oblique muscle is_a: VHOG:0000319 ! skeletal muscle relationship: part_of VHOG:0000764 ! anterior abdominal wall [Term] id: VHOG:0000789 name: abdominal internal oblique muscle is_a: VHOG:0000319 ! skeletal muscle relationship: part_of VHOG:0000764 ! anterior abdominal wall [Term] id: VHOG:0000790 name: interventricular groove relationship: part_of VHOG:0000435 ! heart ventricle [Term] id: VHOG:0000791 name: endolymphatic sac def: "The blind extremity of the endolymphatic duct." [http://medical-dictionary.thefreedictionary.com/endolymphatic+sac] relationship: part_of VHOG:0000284 ! inner ear [Term] id: VHOG:0000793 name: neural fold midbrain def: "Neural fold that is part of the midbrain." [Bgee:curator "Bgee"] synonym: "neural fold mesencephalon" RELATED [] relationship: part_of VHOG:0000069 ! midbrain [Term] id: VHOG:0000794 name: neural fold prosencephalon def: "Neural fold that is part of the prosencephalon." [Bgee:curator "Bgee"] relationship: part_of VHOG:0000383 ! forebrain [Term] id: VHOG:0000795 name: vitreous humour synonym: "vitreous humor" RELATED [] is_a: VHOG:0001726 ! portion of organism substance relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0000796 name: neural crest midbrain def: "Cranial neural crest that is part of the midbrain." [Bgee:curator "Bgee"] synonym: "mesencephalic neural crest" RELATED [] xref: TAO:0000935 is_a: VHOG:0000063 ! cranial neural crest relationship: part_of VHOG:0000793 ! neural fold midbrain [Term] id: VHOG:0000797 name: neural crest prosencephalon def: "Cranial neural crest that is part of the prosencephalon." [ZFA:0000812 "adapted from"] relationship: part_of VHOG:0000794 ! neural fold prosencephalon [Term] id: VHOG:0000798 name: neural crest diencephalon def: "Cranial neural crest that is part of the diencephalon." [Bgee:curator "Bgee"] xref: TAO:0000811 is_a: VHOG:0000063 ! cranial neural crest relationship: part_of VHOG:0000318 ! diencephalon [Term] id: VHOG:0000799 name: neural crest telencephalon def: "Cranial neural crest that is part of the telencephalon." [ZFA:0000812] xref: TAO:0000812 is_a: VHOG:0000063 ! cranial neural crest relationship: part_of VHOG:0000283 ! telencephalon [Term] id: VHOG:0000800 name: temporal bone is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000288 ! chondrocranium relationship: part_of VHOG:0000331 ! vault of skull [Term] id: VHOG:0000801 name: tunica albuginea def: "The fibrous covering of the testicles." [http://en.wikipedia.org/wiki/Tunica_albuginea_of_testis] relationship: part_of VHOG:0000252 ! testis [Term] id: VHOG:0000802 name: lower jaw epithelium relationship: part_of VHOG:0000453 ! lower jaw [Term] id: VHOG:0000805 name: ciliary ganglion is_a: VHOG:0000156 ! ganglion relationship: part_of VHOG:0000755 ! parasympathetic nervous system [Term] id: VHOG:0000806 name: lens pit def: "A pitlike depression in the ectoderm of the lens placode where the primordial lens is developing." [http://medical-dictionary.thefreedictionary.com/lens+pit] relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0000808 name: diencephalic part of interventricular foramen relationship: part_of VHOG:0000007 ! third ventricle [Term] id: VHOG:0000809 name: telencephalic part of interventricular foramen relationship: part_of VHOG:0000643 ! telencephalic ventricle [Term] id: VHOG:0000810 name: knee epithelium relationship: part_of VHOG:0000347 ! knee [Term] id: VHOG:0000811 name: blastocoelic cavity def: "The cavity inside the blastula." [ISBN:978-0198566694 "p.150"] synonym: "blastocoel" RELATED [] synonym: "yolk sac cavity" RELATED [] is_a: VHOG:0001728 ! anatomical space relationship: part_of VHOG:0000745 ! zygote [Term] id: VHOG:0000812 name: mouth def: "The opening of the head through which food passes into the body." [XAO:0003029] xref: TAO:0000547 relationship: part_of VHOG:0000280 ! oral region [Term] id: VHOG:0000813 name: levator operculi - stapedius muscle xref: TAO:0000537 is_a: VHOG:0001494 ! hyoid muscle relationship: part_of VHOG:0000312 ! middle ear [Term] id: VHOG:0000814 name: pulmonary valve def: "The valve with semilunar cusps at the entrance to the pulmonary trunk from the right ventricle of the heart." [http://medical-dictionary.thefreedictionary.com/pulmonary+valve] is_a: VHOG:0001393 ! semilunar valve [Term] id: VHOG:0000815 name: aortic valve def: "The valve between the left ventricle of the heart and the ascending aorta, consisting of three semilunar cusps." [http://medical-dictionary.thefreedictionary.com/aortic+valve] is_a: VHOG:0001393 ! semilunar valve [Term] id: VHOG:0000816 name: tricuspid valve def: "The three-segmented valve of the heart that keeps blood in the right ventricle from flowing back into the right atrium." [http://medical-dictionary.thefreedictionary.com/Tricuspid+valves] synonym: "right atrioventricular valve" RELATED [] is_a: VHOG:0001472 ! atrioventricular valve [Term] id: VHOG:0000817 name: mitral valve def: "A valve of the heart, composed of two triangular flaps, that is located between the left atrium and left ventricle and regulates blood flow between these chambers." [http://medical-dictionary.thefreedictionary.com/mitral+valve] synonym: "bicuspid valve" RELATED [] is_a: VHOG:0001472 ! atrioventricular valve [Term] id: VHOG:0000818 name: heart valve def: "One of the four structures within the heart that prevent backflow of blood by opening and closing with each heartbeat. The valves include two semilunar valves, the aortic and pulmonary; the mitral or bicuspid valve; and the tricuspid valve. The valves permit blood flow in only one direction." [http://medical-dictionary.thefreedictionary.com/heart+valve] synonym: "cardiac valve" RELATED [] relationship: part_of VHOG:0000276 ! heart [Term] id: VHOG:0000819 name: aortic valve leaflets relationship: part_of VHOG:0000815 ! aortic valve [Term] id: VHOG:0000820 name: pulmonary valve leaflets relationship: part_of VHOG:0000814 ! pulmonary valve [Term] id: VHOG:0000821 name: tricuspid valve leaflets relationship: part_of VHOG:0000816 ! tricuspid valve [Term] id: VHOG:0000822 name: mitral valve leaflets relationship: part_of VHOG:0000817 ! mitral valve [Term] id: VHOG:0000823 name: masseter is_a: VHOG:0000319 ! skeletal muscle [Term] id: VHOG:0000824 name: spinal nerve def: "Any of the paired nerves emerging from the spinal cord, each attached to the cord by two roots: ventral and dorsal, and passing out between the vertebrae." [http://medical-dictionary.thefreedictionary.com/spinal+nerve "adapted from"] is_a: VHOG:0001757 ! portion of tissue relationship: part_of VHOG:0000329 ! spinal peripheral nervous system [Term] id: VHOG:0000825 name: extrinsic tongue muscle is_a: VHOG:0001390 ! tongue skeletal muscle [Term] id: VHOG:0000826 name: foramen caecum def: "A thickened and indented region in the midline in the floor of the rostral part of the pharyngeal region of the foregut, located between the second and third branchial arches that is the first indication of the thyroid primordium." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.132"] relationship: part_of VHOG:0000418 ! thyroid [Term] id: VHOG:0000827 name: omental bursa cavity relationship: part_of VHOG:0000458 ! omental bursa [Term] id: VHOG:0000828 name: quadriceps def: "The quadriceps is a collective term for the rectus femoris and the three heads of the vastus (lateralis, medialis, intermedius)." [ISBN:978-0072528305 "Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.391"] synonym: "quadriceps femoris" RELATED [] is_a: VHOG:0000319 ! skeletal muscle relationship: part_of VHOG:0000349 ! hindlimb stylopodium [Term] id: VHOG:0000829 name: inner canthus def: "The angle at the end of the palpebral fissure, the slit between the eyelids, close to the nose." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) adapted from p.263"] synonym: "medial canthus" RELATED [] synonym: "nasal canthus" RELATED [] relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0000830 name: yolk sac def: "One of the extraembryonic fetal membranes that balloons out from the fetal midgut." [http://medical-dictionary.thefreedictionary.com/yolk+sac] is_a: VHOG:0000292 ! extraembryonic structure [Term] id: VHOG:0000831 name: right lung accessory lobe synonym: "right lung postcaval lobe" RELATED [] relationship: part_of VHOG:0000301 ! right lung [Term] id: VHOG:0000832 name: cerebral aqueduct synonym: "medial tectal ventricle" RELATED [] synonym: "mesencephalic ventricle" RELATED [] synonym: "mesencephalic vesicle" RELATED [] synonym: "midbrain ventricle" RELATED [] synonym: "tectal ventricle" RELATED [] xref: TAO:0000159 relationship: part_of VHOG:0000005 ! brain ventricular system relationship: part_of VHOG:0000069 ! midbrain [Term] id: VHOG:0000833 name: olfactory lobe relationship: part_of VHOG:0000283 ! telencephalon [Term] id: VHOG:0000834 name: trapezius is_a: VHOG:0000319 ! skeletal muscle [Term] id: VHOG:0000842 name: lymphatic system synonym: "lymphoid system" RELATED [] synonym: "lymporeticular system" RELATED [] is_a: VHOG:0000302 ! cardiovascular system [Term] id: VHOG:0000844 name: hamstring is_a: VHOG:0000319 ! skeletal muscle relationship: part_of VHOG:0000349 ! hindlimb stylopodium [Term] id: VHOG:0000845 name: transversus abdominis def: "One of a pair of transverse abdominal muscles that is the anterolateral muscle of the abdomen, lying immediately under the internal abdominal oblique." [http://medical-dictionary.thefreedictionary.com/transversus+abdominis] synonym: "transversalis" RELATED [] is_a: VHOG:0001245 ! muscle relationship: part_of VHOG:0000764 ! anterior abdominal wall [Term] id: VHOG:0000846 name: deltoid is_a: VHOG:0000319 ! skeletal muscle [Term] id: VHOG:0000847 name: genioglossus def: "Either of a pair of lingual muscles with origin in the mandible, with insertion to the lingual fascia below the mucous membrane and epiglottis, with nerve supply from the hypoglossal nerve, and whose action depresses and protrudes the tongue." [http://medical-dictionary.thefreedictionary.com/genioglossus] is_a: VHOG:0000825 ! extrinsic tongue muscle [Term] id: VHOG:0000848 name: supraspinatus is_a: VHOG:0001245 ! muscle [Term] id: VHOG:0000849 name: clavicle relationship: part_of VHOG:0000335 ! pectoral girdle and thoracic body wall relationship: part_of VHOG:0000342 ! shoulder relationship: part_of VHOG:0001156 ! pectoral girdle relationship: part_of VHOG:0001256 ! forelimb skeleton [Term] id: VHOG:0000850 name: subscapularis is_a: VHOG:0001245 ! muscle [Term] id: VHOG:0000851 name: triceps synonym: "triceps brachii" RELATED [] is_a: VHOG:0000319 ! skeletal muscle relationship: part_of VHOG:0000343 ! forelimb stylopodium [Term] id: VHOG:0000852 name: peritoneal cavity def: "The potential space between the parietal and visceral layers of the peritoneum, which are normally in contact. The peritoneal cavity is divided into the greater and lesser sac. The greater sac is the peritoneal cavity, and the lesser sac is the omental bursa." [http://medical-dictionary.thefreedictionary.com/peritoneal+cavity] is_a: VHOG:0001728 ! anatomical space relationship: part_of VHOG:0000316 ! intraembryonic coelom [Term] id: VHOG:0000853 name: sterno-mastoid synonym: "sternomastoid" RELATED [] is_a: VHOG:0001245 ! muscle [Term] id: VHOG:0000854 name: otic capsule def: "The embryonic cartilage capsule that surrounds the inner ear mechanism and develops into bony tissue." [http://medical-dictionary.thefreedictionary.com/otic+capsule] synonym: "auditory capsule" RELATED [] synonym: "periotic capsule" RELATED [] xref: TAO:0001500 is_a: VHOG:0001207 ! cartilage relationship: part_of VHOG:0000284 ! inner ear relationship: part_of VHOG:0000288 ! chondrocranium [Term] id: VHOG:0000855 name: amniotic cavity def: "The closed sac between the embryo and the amnion, containing the amniotic fluid." [http://medical-dictionary.thefreedictionary.com/amniotic+cavity] is_a: VHOG:0000767 ! extraembryonic cavities [Term] id: VHOG:0000856 name: sternum relationship: part_of VHOG:0000335 ! pectoral girdle and thoracic body wall relationship: part_of VHOG:0001156 ! pectoral girdle [Term] id: VHOG:0000857 name: right lung caudal lobe synonym: "right lung inferior lobe" RELATED [] relationship: part_of VHOG:0000301 ! right lung [Term] id: VHOG:0000858 name: greater sac relationship: part_of VHOG:0000852 ! peritoneal cavity [Term] id: VHOG:0000859 name: right lung cranial lobe synonym: "right lung superior lobe" RELATED [] relationship: part_of VHOG:0000301 ! right lung [Term] id: VHOG:0000860 name: skin synonym: "cuticle" RELATED [] synonym: "integument" RELATED [] xref: TAO:0000368 is_a: VHOG:0001757 ! portion of tissue relationship: part_of VHOG:0000403 ! integumental system [Term] id: VHOG:0000861 name: biceps synonym: "biceps brachii" RELATED [] is_a: VHOG:0000319 ! skeletal muscle relationship: part_of VHOG:0000343 ! forelimb stylopodium [Term] id: VHOG:0000862 name: philtrum relationship: part_of VHOG:0000677 ! lip [Term] id: VHOG:0000863 name: rectus abdominis is_a: VHOG:0000319 ! skeletal muscle relationship: part_of VHOG:0000764 ! anterior abdominal wall [Term] id: VHOG:0000864 name: marginal layer alar plate medulla oblongata relationship: part_of VHOG:0000323 ! alar plate medulla oblongata [Term] id: VHOG:0000865 name: marginal layer basal plate medulla oblongata relationship: part_of VHOG:0000324 ! basal plate medulla oblongata [Term] id: VHOG:0000866 name: marginal layer lateral wall midbrain relationship: part_of VHOG:0000455 ! lateral wall midbrain [Term] id: VHOG:0000867 name: marginal layer lateral wall diencephalon relationship: part_of VHOG:0000596 ! lateral wall diencephalon [Term] id: VHOG:0000868 name: marginal layer hypothalamus relationship: part_of VHOG:0000179 ! hypothalamus [Term] id: VHOG:0000869 name: marginal layer thalamus relationship: part_of VHOG:0000657 ! thalamus [Term] id: VHOG:0000870 name: marginal layer telencephalon relationship: part_of VHOG:0000283 ! telencephalon [Term] id: VHOG:0000871 name: marginal layer olfactory cortex relationship: part_of VHOG:0000325 ! olfactory cortex [Term] id: VHOG:0000872 name: marginal layer alar plate metencephalon relationship: part_of VHOG:0000306 ! alar plate metencephalon [Term] id: VHOG:0000873 name: marginal layer basal plate metencephalon relationship: part_of VHOG:0000320 ! basal plate metencephalon [Term] id: VHOG:0000874 name: marginal layer alar plate myelencephalon relationship: part_of VHOG:0000321 ! alar plate myelencephalon [Term] id: VHOG:0000875 name: marginal layer basal plate myelencephalon relationship: part_of VHOG:0000322 ! basal plate myelencephalon [Term] id: VHOG:0000876 name: 3rd pharyngeal membrane relationship: part_of VHOG:0000298 ! pharyngeal arch 3 [Term] id: VHOG:0000877 name: 2nd pharyngeal membrane relationship: part_of VHOG:0000297 ! pharyngeal arch 2 [Term] id: VHOG:0000878 name: fundus epithelium relationship: part_of VHOG:0000421 ! stomach fundus [Term] id: VHOG:0000879 name: ventricular layer lateral wall midbrain synonym: "ventricular layer lateral wall mesencephalon" RELATED [] relationship: part_of VHOG:0000455 ! lateral wall midbrain [Term] id: VHOG:0000880 name: ventricular layer lateral wall diencephalon relationship: part_of VHOG:0000596 ! lateral wall diencephalon [Term] id: VHOG:0000882 name: ventricular layer telencephalon relationship: part_of VHOG:0000283 ! telencephalon [Term] id: VHOG:0000883 name: ventricular layer lateral wall spinal cord relationship: part_of VHOG:0000513 ! lateral wall spinal cord [Term] id: VHOG:0000884 name: ventricular layer epithalamus relationship: part_of VHOG:0000178 ! epithalamus [Term] id: VHOG:0000885 name: ventricular layer hypothalamus relationship: part_of VHOG:0000179 ! hypothalamus [Term] id: VHOG:0000886 name: ventricular layer thalamus relationship: part_of VHOG:0000657 ! thalamus [Term] id: VHOG:0000887 name: ventricular layer olfactory cortex relationship: part_of VHOG:0000325 ! olfactory cortex [Term] id: VHOG:0000889 name: ventricular layer basal plate metencephalon relationship: part_of VHOG:0000320 ! basal plate metencephalon [Term] id: VHOG:0000890 name: ventricular layer alar plate myelencephalon relationship: part_of VHOG:0000321 ! alar plate myelencephalon [Term] id: VHOG:0000891 name: ventricular layer basal plate myelencephalon relationship: part_of VHOG:0000322 ! basal plate myelencephalon [Term] id: VHOG:0000892 name: ventricular layer alar plate medulla oblongata relationship: part_of VHOG:0000323 ! alar plate medulla oblongata [Term] id: VHOG:0000893 name: ventricular layer basal plate medulla oblongata relationship: part_of VHOG:0000324 ! basal plate medulla oblongata [Term] id: VHOG:0000894 name: sciatic nerve is_a: VHOG:0000901 ! peripheral nerve relationship: part_of VHOG:0000345 ! leg relationship: part_of VHOG:0000926 ! lumbosacral plexus [Term] id: VHOG:0000895 name: pectoralis major is_a: VHOG:0000319 ! skeletal muscle [Term] id: VHOG:0000896 name: radial nerve is_a: VHOG:0000901 ! peripheral nerve relationship: part_of VHOG:0000339 ! arm relationship: part_of VHOG:0000372 ! brachial plexus [Term] id: VHOG:0000897 name: polar trophectoderm syncytiotrophoblast def: "The polar trophectoderm cells that migrate away from the ICM and loose their cell boundaries." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.10"] relationship: part_of VHOG:0000980 ! polar trophectoderm [Term] id: VHOG:0000898 name: basal column spinal cord relationship: part_of VHOG:0000911 ! mantle layer lateral wall spinal cord [Term] id: VHOG:0000899 name: alar column spinal cord relationship: part_of VHOG:0000911 ! mantle layer lateral wall spinal cord [Term] id: VHOG:0000900 name: central nervous system nerve relationship: part_of VHOG:0000293 ! central nervous system [Term] id: VHOG:0000901 name: peripheral nerve is_a: VHOG:0001757 ! portion of tissue relationship: part_of VHOG:0000399 ! peripheral nervous system [Term] id: VHOG:0000902 name: pectoralis minor is_a: VHOG:0000319 ! skeletal muscle [Term] id: VHOG:0000903 name: intercostal muscle synonym: "intercostales" RELATED [] is_a: VHOG:0001245 ! muscle [Term] id: VHOG:0000904 name: intercostales externus synonym: "external intercostal muscle" RELATED [] is_a: VHOG:0000903 ! intercostal muscle [Term] id: VHOG:0000905 name: intercostales internus synonym: "internal intercostal muscle" RELATED [] is_a: VHOG:0000903 ! intercostal muscle [Term] id: VHOG:0000906 name: mantle layer alar plate myelencephalon relationship: part_of VHOG:0000321 ! alar plate myelencephalon [Term] id: VHOG:0000907 name: mantle layer basal plate myelencephalon relationship: part_of VHOG:0000322 ! basal plate myelencephalon [Term] id: VHOG:0000908 name: mantle layer alar plate medulla oblongata relationship: part_of VHOG:0000323 ! alar plate medulla oblongata [Term] id: VHOG:0000909 name: mantle layer basal plate medulla oblongata relationship: part_of VHOG:0000324 ! basal plate medulla oblongata [Term] id: VHOG:0000910 name: mantle layer lateral wall midbrain synonym: "mantle layer lateral wall mesencephalon" RELATED [] relationship: part_of VHOG:0000455 ! lateral wall midbrain [Term] id: VHOG:0000911 name: mantle layer lateral wall spinal cord relationship: part_of VHOG:0000513 ! lateral wall spinal cord [Term] id: VHOG:0000912 name: mantle layer lateral wall diencephalon relationship: part_of VHOG:0000596 ! lateral wall diencephalon [Term] id: VHOG:0000913 name: mantle layer epithalamus relationship: part_of VHOG:0000178 ! epithalamus [Term] id: VHOG:0000914 name: mantle layer hypothalamus relationship: part_of VHOG:0000179 ! hypothalamus [Term] id: VHOG:0000915 name: mantle layer thalamus relationship: part_of VHOG:0000657 ! thalamus [Term] id: VHOG:0000916 name: mantle layer telencephalon relationship: part_of VHOG:0000283 ! telencephalon [Term] id: VHOG:0000917 name: mantle layer olfactory cortex relationship: part_of VHOG:0000325 ! olfactory cortex [Term] id: VHOG:0000918 name: mantle layer alar plate metencephalon relationship: part_of VHOG:0000306 ! alar plate metencephalon [Term] id: VHOG:0000919 name: mantle layer basal plate metencephalon relationship: part_of VHOG:0000320 ! basal plate metencephalon [Term] id: VHOG:0000920 name: segmental spinal nerve is_a: VHOG:0000824 ! spinal nerve [Term] id: VHOG:0000921 name: infraspinatus is_a: VHOG:0000319 ! skeletal muscle [Term] id: VHOG:0000922 name: ulnar nerve is_a: VHOG:0000901 ! peripheral nerve relationship: part_of VHOG:0000339 ! arm relationship: part_of VHOG:0000372 ! brachial plexus [Term] id: VHOG:0000923 name: ductus arteriosus def: "The temporary channel or blood vessel between the aorta and pulmonary artery in the fetus." [http://medical-dictionary.thefreedictionary.com/ductus+arteriosus] is_a: VHOG:0001251 ! artery relationship: part_of VHOG:0000670 ! outflow tract [Term] id: VHOG:0000924 name: ductus venosus def: "The vascular channel in the fetus passing through the liver and joining the umbilical vein with the inferior vena cava." [http://medical-dictionary.thefreedictionary.com/ductus+venosus] is_a: VHOG:0001250 ! blood vessel relationship: part_of VHOG:0000277 ! venous system [Term] id: VHOG:0000925 name: spinal nerve plexus relationship: part_of VHOG:0000329 ! spinal peripheral nervous system [Term] id: VHOG:0000926 name: lumbosacral plexus relationship: part_of VHOG:0000925 ! spinal nerve plexus [Term] id: VHOG:0000927 name: membranous part interventricular septum relationship: part_of VHOG:0000386 ! interventricular septum [Term] id: VHOG:0000929 name: temporalis is_a: VHOG:0000319 ! skeletal muscle [Term] id: VHOG:0000930 name: latissimus dorsi is_a: VHOG:0000319 ! skeletal muscle [Term] id: VHOG:0000931 name: platysma relationship: part_of VHOG:0000403 ! integumental system relationship: part_of VHOG:0001275 ! musculoskeletal system [Term] id: VHOG:0000932 name: endocardial cushion xref: TAO:0001317 relationship: part_of VHOG:0000276 ! heart [Term] id: VHOG:0000933 name: diaphragm dome relationship: part_of VHOG:0000713 ! diaphragm [Term] id: VHOG:0000935 name: right lung vascular element relationship: part_of VHOG:0000301 ! right lung [Term] id: VHOG:0000936 name: heart cardiac jelly def: "The extracellular matrix between the myocardium and the endocardium. The cardiac jelly plays a central role in the septation of the heart and comprises most of the thickness of the heart wall at early stages, but disappears as the heart differentiates." [ZFA:0001318] xref: TAO:0001318 relationship: part_of VHOG:0000276 ! heart [Term] id: VHOG:0000937 name: bulbus cordis caudal half cardiac jelly def: "Cardiac jelly that is part of the bulbus cordis caudal half." [Bgee:curator "Bgee"] relationship: part_of VHOG:0000436 ! bulbus cordis caudal half [Term] id: VHOG:0000938 name: left atrium cardiac jelly def: "Cardiac jelly that is part of the left atrium." [Bgee:curator "Bgee"] is_a: VHOG:0000936 ! heart cardiac jelly relationship: part_of VHOG:0000369 ! left atrium [Term] id: VHOG:0000939 name: right atrium cardiac jelly def: "Cardiac jelly that is part of the right atrium." [Bgee:curator "Bgee"] is_a: VHOG:0000936 ! heart cardiac jelly relationship: part_of VHOG:0000328 ! right atrium [Term] id: VHOG:0000940 name: outflow tract cardiac jelly def: "Cardiac jelly that is part of the outflow tract." [Bgee:curator "Bgee"] is_a: VHOG:0000936 ! heart cardiac jelly relationship: part_of VHOG:0000670 ! outflow tract [Term] id: VHOG:0000941 name: atrium cardiac jelly def: "Cardiac jelly that is part of the atrium." [Bgee:curator "Bgee"] is_a: VHOG:0000936 ! heart cardiac jelly relationship: part_of VHOG:0000175 ! heart atrium [Term] id: VHOG:0000942 name: bulbus cordis rostral half cardiac jelly def: "Cardiac jelly that is part of the bulbus cordis rostral half." [Bgee:curator "Bgee"] relationship: part_of VHOG:0000437 ! bulbus cordis rostral half [Term] id: VHOG:0000943 name: ventricle cardiac jelly def: "Cardiac jelly that is part of the ventricle." [Bgee:curator "Bgee"] is_a: VHOG:0000936 ! heart cardiac jelly relationship: part_of VHOG:0000717 ! heart right ventricle relationship: part_of VHOG:0000718 ! heart left ventricle [Term] id: VHOG:0000944 name: digit is_a: VHOG:0001737 ! anatomical cluster relationship: part_of VHOG:0000344 ! forelimb autopodium relationship: part_of VHOG:0000350 ! hindlimb autopodium relationship: part_of VHOG:0001255 ! hindlimb skeleton relationship: part_of VHOG:0001256 ! forelimb skeleton [Term] id: VHOG:0000945 name: metanephros pelvis relationship: part_of VHOG:0000039 ! metanephros [Term] id: VHOG:0000946 name: 3rd pharyngeal arch ectoderm relationship: part_of VHOG:0000298 ! pharyngeal arch 3 [Term] id: VHOG:0000948 name: metatarsus pre-cartilage condensation relationship: part_of VHOG:0000944 ! digit [Term] id: VHOG:0000949 name: radius-ulna pre-cartilage condensation relationship: part_of VHOG:0000341 ! forelimb zeugopodium [Term] id: VHOG:0000950 name: humerus pre-cartilage condensation relationship: part_of VHOG:0000343 ! forelimb stylopodium [Term] id: VHOG:0000951 name: femur pre-cartilage condensation relationship: part_of VHOG:0000349 ! hindlimb stylopodium [Term] id: VHOG:0000952 name: foot phalanx pre-cartilage condensation relationship: part_of VHOG:0000944 ! digit [Term] id: VHOG:0000953 name: metacarpus pre-cartilage condensation relationship: part_of VHOG:0000944 ! digit [Term] id: VHOG:0000954 name: hand phalanx pre-cartilage condensation relationship: part_of VHOG:0000944 ! digit [Term] id: VHOG:0000955 name: carpus pre-cartilage condensation relationship: part_of VHOG:0000344 ! forelimb autopodium [Term] id: VHOG:0000956 name: stapes pre-cartilage condensation relationship: part_of VHOG:0000461 ! auditory ossicle [Term] id: VHOG:0000957 name: incus pre-cartilage condensation relationship: part_of VHOG:0000461 ! auditory ossicle [Term] id: VHOG:0000958 name: malleus pre-cartilage condensation relationship: part_of VHOG:0000461 ! auditory ossicle [Term] id: VHOG:0000959 name: basioccipital pre-cartilage condensation relationship: part_of VHOG:0000288 ! chondrocranium [Term] id: VHOG:0000960 name: scapula pre-cartilage condensation relationship: part_of VHOG:0000335 ! pectoral girdle and thoracic body wall [Term] id: VHOG:0000961 name: sternebral bone pre-cartilage condensation relationship: part_of VHOG:0000856 ! sternum [Term] id: VHOG:0000962 name: ischial pre-cartilage condensation relationship: part_of VHOG:0000305 ! pelvic girdle [Term] id: VHOG:0000963 name: exoccipital pre-cartilage condensation relationship: part_of VHOG:0000288 ! chondrocranium [Term] id: VHOG:0000964 name: iliac pre-cartilage condensation relationship: part_of VHOG:0000305 ! pelvic girdle [Term] id: VHOG:0000965 name: pubic pre-cartilage condensation relationship: part_of VHOG:0000305 ! pelvic girdle [Term] id: VHOG:0000966 name: pharyngeal pouch 3 def: "A pouch that is situated between the 3rd and 4th pharyngeal arch." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.72"] synonym: "third pharyngeal pouch" RELATED [] synonym: "third visceral pouch" RELATED [] synonym: "visceral pouch 3" RELATED [] xref: TAO:0001131 is_a: VHOG:0001203 ! pharyngeal pouch relationship: part_of VHOG:0000298 ! pharyngeal arch 3 [Term] id: VHOG:0000967 name: pharyngeal pouch 2 def: "A pouch that is situated between the 2nd and 3rd pharyngeal arch." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.72"] synonym: "second pharyngeal pouch" RELATED [] synonym: "second visceral pouch" RELATED [] synonym: "visceral pouch 2" RELATED [] xref: TAO:0001130 is_a: VHOG:0001203 ! pharyngeal pouch relationship: part_of VHOG:0000297 ! pharyngeal arch 2 [Term] id: VHOG:0000968 name: 4th pharyngeal groove def: "A groove that is situated between the 4th and 5th pharyngeal arch." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.70"] synonym: "4th pharyngeal cleft" RELATED [] relationship: part_of VHOG:0000299 ! pharyngeal arch 4 [Term] id: VHOG:0000969 name: 1st pharyngeal groove def: "A groove that is situated between the 1st and 2nd pharyngeal arch." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.70"] synonym: "1st pharyngeal cleft" RELATED [] relationship: part_of VHOG:0000296 ! pharyngeal arch 1 [Term] id: VHOG:0000970 name: pharyngeal pouch 1 def: "A pouch that is situated between the 1st and 2nd pharyngeal arch." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.72"] synonym: "first pharyngeal pouch" RELATED [] synonym: "first visceral pouch" RELATED [] synonym: "visceral pouch 1" RELATED [] xref: TAO:0001128 is_a: VHOG:0001203 ! pharyngeal pouch relationship: part_of VHOG:0000296 ! pharyngeal arch 1 [Term] id: VHOG:0000971 name: pharyngeal pouch 4 def: "A pouch that is situated between the 4th and 5th pharyngeal arch." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.72"] synonym: "fourth pharyngeal pouch" RELATED [] synonym: "fourth visceral pouch" RELATED [] synonym: "visceral pouch 4" RELATED [] xref: TAO:0001134 is_a: VHOG:0001203 ! pharyngeal pouch relationship: part_of VHOG:0000299 ! pharyngeal arch 4 [Term] id: VHOG:0000972 name: 2nd pharyngeal groove def: "A groove that is situated between the 2nd and 3rd pharyngeal arch." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.70"] synonym: "2nd pharyngeal cleft" RELATED [] relationship: part_of VHOG:0000297 ! pharyngeal arch 2 [Term] id: VHOG:0000973 name: 3rd pharyngeal groove def: "A groove that is situated between the 3rd and 4th pharyngeal arch." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.70"] synonym: "3rd pharyngeal cleft" RELATED [] relationship: part_of VHOG:0000298 ! pharyngeal arch 3 [Term] id: VHOG:0000974 name: acetabular region synonym: "acetabulum" RELATED [] relationship: part_of VHOG:0000305 ! pelvic girdle relationship: part_of VHOG:0000335 ! pectoral girdle and thoracic body wall [Term] id: VHOG:0000975 name: cardiogenic plate synonym: "myocardial plate" RELATED [] relationship: part_of VHOG:0000276 ! heart [Term] id: VHOG:0000976 name: labial swelling relationship: part_of VHOG:0000725 ! male reproductive system relationship: part_of VHOG:0000726 ! female reproductive system [Term] id: VHOG:0000978 name: tunica vasculosa lentis def: "The tunica vasculosa lentis is an extensive capillary network, spreading over the posterior and lateral surfaces of the lens of the eye. It disappears shortly after birth." [http://en.wikipedia.org/wiki/Tunica_vasculosa_lentis] relationship: part_of VHOG:0001477 ! hyaloid cavity [Term] id: VHOG:0000979 name: trophectoderm def: "The outer cellular layer of the mammalian blastocyst." [ISBN:978-0072528305 "Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.750"] synonym: "trophoblast" RELATED [] is_a: VHOG:0000292 ! extraembryonic structure relationship: part_of VHOG:0000726 ! female reproductive system [Term] id: VHOG:0000980 name: polar trophectoderm def: "The part of the trophectoderm overlying the inner cell mass." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.10"] synonym: "polar trophoblast" RELATED [] is_a: VHOG:0000979 ! trophectoderm [Term] id: VHOG:0000981 name: respiratory epithelium is_a: VHOG:0000387 ! epithelium relationship: part_of VHOG:0000393 ! respiratory tract [Term] id: VHOG:0000982 name: pulmonary artery def: "One of two arteries, leaving from the heart, the left one supplying the left lung and the right one supplying the right lung." [http://medical-dictionary.thefreedictionary.com/pulmonary+artery "adapted from"] is_a: VHOG:0001251 ! artery [Term] id: VHOG:0000983 name: metanephric collecting duct synonym: "metanephric collecting tubule" RELATED [] is_a: VHOG:0001526 ! metanephric tubule [Term] id: VHOG:0000984 name: erector spinae is_a: VHOG:0000319 ! skeletal muscle [Term] id: VHOG:0000986 name: otocyst epithelium relationship: part_of VHOG:0001148 ! otic vesicle [Term] id: VHOG:0000988 name: endolymphatic sac epithelium relationship: part_of VHOG:0000791 ! endolymphatic sac [Term] id: VHOG:0000989 name: submandibular gland epithelium relationship: part_of VHOG:0000364 ! submandibular gland [Term] id: VHOG:0000990 name: forelimb stylopodium epithelium relationship: part_of VHOG:0000343 ! forelimb stylopodium [Term] id: VHOG:0000991 name: hand interdigital region relationship: part_of VHOG:0000344 ! forelimb autopodium [Term] id: VHOG:0000992 name: foot interdigital region relationship: part_of VHOG:0000350 ! hindlimb autopodium [Term] id: VHOG:0000993 name: hand interdigital epithelium relationship: part_of VHOG:0000991 ! hand interdigital region [Term] id: VHOG:0000995 name: foot interdigital epithelium relationship: part_of VHOG:0000992 ! foot interdigital region [Term] id: VHOG:0000997 name: elbow joint is_a: VHOG:0001276 ! joint relationship: part_of VHOG:0000340 ! elbow [Term] id: VHOG:0000998 name: arytenoid pre-cartilage condensation relationship: part_of VHOG:0001550 ! larynx cartilage [Term] id: VHOG:0000999 name: interventricular septum myocardium def: "Myocardium that is part of the interventricular septum." [Bgee:curator "Bgee"] synonym: "interventricular septum cardiac muscle" RELATED [] synonym: "muscular part of interventricular septum" RELATED [] relationship: part_of VHOG:0000386 ! interventricular septum [Term] id: VHOG:0001000 name: jugular lymph sac def: "Lymphatic vessels develop from lymph sacs that arise from developing veins, which are derived from mesoderm. The first lymph sacs to appear are the paired jugular lymph sacs at the junction of the internal jugular and subclavian veins." [http://en.wikipedia.org/wiki/Lymphatic_system] relationship: part_of VHOG:0000842 ! lymphatic system [Term] id: VHOG:0001001 name: hip joint is_a: VHOG:0001276 ! joint relationship: part_of VHOG:0000346 ! hip [Term] id: VHOG:0001002 name: shoulder joint is_a: VHOG:0001276 ! joint relationship: part_of VHOG:0000342 ! shoulder [Term] id: VHOG:0001003 name: knee joint is_a: VHOG:0001276 ! joint relationship: part_of VHOG:0000347 ! knee [Term] id: VHOG:0001005 name: illopsoas synonym: "ilio-psoas" RELATED [] is_a: VHOG:0000319 ! skeletal muscle [Term] id: VHOG:0001006 name: neural crest spinal cord def: "Cranial neural crest that is part of the spinal cord." [Bgee:curator "Bgee"] synonym: "spinal neural crest" RELATED [] is_a: VHOG:0000063 ! cranial neural crest relationship: part_of VHOG:0000628 ! neural fold spinal cord [Term] id: VHOG:0001018 name: roof plate rhombomeres xref: TAO:0001311 relationship: part_of VHOG:0000672 ! rhombomere [Term] id: VHOG:0001019 name: floor plate hindbrain def: "Floor plate that is part of the hindbrain." [Bgee:curator "Bgee"] synonym: "floor plate rhombencephalon" RELATED [] synonym: "floorplate hindbrain" RELATED [] xref: TAO:0001258 relationship: part_of VHOG:0000070 ! hindbrain [Term] id: VHOG:0001020 name: laterall wall rhombomeres xref: TAO:0000781 xref: TAO:0000782 xref: TAO:0000783 xref: TAO:0000907 xref: TAO:0000908 xref: TAO:0000909 xref: TAO:0000994 xref: TAO:0000995 relationship: part_of VHOG:0000672 ! rhombomere [Term] id: VHOG:0001021 name: maxilla def: "The dermal maxilla forms part of the upper jaw." [ZFA:0000270] xref: TAO:0000270 is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000429 ! upper jaw skeleton relationship: part_of VHOG:0000511 ! dorsal pharyngeal arch 1 relationship: part_of VHOG:0000812 ! mouth relationship: part_of VHOG:0001665 ! dermatocranium [Term] id: VHOG:0001022 name: dentary def: "The dentary is a dermal bone that forms the antero-lateral part of the lower jaw in fishes and amphibians. In mammals the lower jaw consists entirely of the dentary bone." [ZFA:0000191, ISBN:978-0030223693 "Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.248"] synonym: "dentary bone" RELATED [] synonym: "mandible" RELATED [] xref: TAO:0000191 is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000428 ! lower jaw skeleton relationship: part_of VHOG:0000510 ! ventral pharyngeal arch 1 relationship: part_of VHOG:0000812 ! mouth relationship: part_of VHOG:0001665 ! dermatocranium [Term] id: VHOG:0001025 name: primary palate epithelium relationship: part_of VHOG:0000362 ! primary palate [Term] id: VHOG:0001026 name: brachialis def: "A muscle of the stylopodium, covering the distal half of the humerus and the anterior part of the elbow joint. It functions to flex the zeugopodium." [http://medical-dictionary.thefreedictionary.com/brachialis "adapted from"] is_a: VHOG:0000319 ! skeletal muscle relationship: part_of VHOG:0000343 ! forelimb stylopodium [Term] id: VHOG:0001030 name: 3rd pharyngeal pouch endoderm relationship: part_of VHOG:0000966 ! pharyngeal pouch 3 [Term] id: VHOG:0001031 name: foot digit epithelium relationship: part_of VHOG:0000944 ! digit [Term] id: VHOG:0001032 name: hand digit epithelium relationship: part_of VHOG:0000944 ! digit [Term] id: VHOG:0001034 name: main bronchus epithelium relationship: part_of VHOG:0000370 ! main bronchus [Term] id: VHOG:0001037 name: rectum epithelium relationship: part_of VHOG:0001751 ! rectum [Term] id: VHOG:0001038 name: nasopharynx epithelium relationship: part_of VHOG:0000375 ! nasopharynx [Term] id: VHOG:0001039 name: superior semicircular canal epithelium relationship: part_of VHOG:0000246 ! anterior semicircular duct [Term] id: VHOG:0001040 name: palatal shelf epithelium relationship: part_of VHOG:0000378 ! palatal shelf [Term] id: VHOG:0001041 name: hindlimb stylopodium epithelium synonym: "hind limb stylopodium epithelium" RELATED [] relationship: part_of VHOG:0000349 ! hindlimb stylopodium [Term] id: VHOG:0001043 name: endolymphatic appendage epithelium relationship: part_of VHOG:0000373 ! endolymphatic appendage [Term] id: VHOG:0001044 name: elbow epithelium relationship: part_of VHOG:0000340 ! elbow [Term] id: VHOG:0001045 name: trachea epithelium relationship: part_of VHOG:0000371 ! trachea [Term] id: VHOG:0001049 name: medullary tubule relationship: part_of VHOG:0000039 ! metanephros [Term] id: VHOG:0001050 name: hindlimb zeugopodium epithelium synonym: "hind limb zeugopodium epithelium" RELATED [] relationship: part_of VHOG:0000348 ! hindlimb zeudopodium [Term] id: VHOG:0001052 name: 4th pharyngeal arch mesenchyme relationship: part_of VHOG:0000299 ! pharyngeal arch 4 [Term] id: VHOG:0001058 name: median lingual swelling epithelium relationship: part_of VHOG:0000730 ! median lingual swelling [Term] id: VHOG:0001059 name: lateral lingual swelling epithelium relationship: part_of VHOG:0000731 ! lateral lingual swelling [Term] id: VHOG:0001062 name: 2nd pharyngeal arch ectoderm relationship: part_of VHOG:0000297 ! pharyngeal arch 2 [Term] id: VHOG:0001064 name: apical ectodermal ridge forelimb def: "An ectodermal thickening at the end of the forelimb bud in the developing embryo." [http://medical-dictionary.thefreedictionary.com/apical+ectodermal+ridge "adapted from"] synonym: "AER forelimb" RELATED [] xref: TAO:0000085 xref: TAO:0000736 relationship: part_of VHOG:0001754 ! forelimb - pectoral fin bud [Term] id: VHOG:0001066 name: apical ectodermal ridge hindlimb def: "An ectodermal thickening at the end of the hindlimb bud in the developing embryo." [http://medical-dictionary.thefreedictionary.com/apical+ectodermal+ridge "adapted from"] synonym: "AER hindlimb" RELATED [] synonym: "apical ectodermal ridge hind limb" RELATED [] xref: TAO:0001385 xref: TAO:0001450 relationship: part_of VHOG:0000350 ! hindlimb autopodium [Term] id: VHOG:0001068 name: otic pit epithelium relationship: part_of VHOG:0001147 ! otic pit [Term] id: VHOG:0001081 name: 3rd pharyngeal arch endoderm relationship: part_of VHOG:0000298 ! pharyngeal arch 3 [Term] id: VHOG:0001083 name: 3rd pharyngeal arch mesenchyme relationship: part_of VHOG:0000298 ! pharyngeal arch 3 [Term] id: VHOG:0001088 name: mammary gland epithelium relationship: part_of VHOG:0000398 ! mammary gland [Term] id: VHOG:0001092 name: 4th pharyngeal arch endoderm relationship: part_of VHOG:0000299 ! pharyngeal arch 4 [Term] id: VHOG:0001095 name: 4th pharyngeal arch ectoderm relationship: part_of VHOG:0000299 ! pharyngeal arch 4 [Term] id: VHOG:0001096 name: forelimb zeugopodium epithelium relationship: part_of VHOG:0000341 ! forelimb zeugopodium [Term] id: VHOG:0001098 name: sublingual gland epithelium relationship: part_of VHOG:0000363 ! sublingual gland [Term] id: VHOG:0001102 name: 2nd pharyngeal arch mesenchyme relationship: part_of VHOG:0000297 ! pharyngeal arch 2 [Term] id: VHOG:0001108 name: 2nd pharyngeal arch endoderm relationship: part_of VHOG:0000297 ! pharyngeal arch 2 [Term] id: VHOG:0001113 name: jugular foramen def: "One of a pair of openings between the lateral part of the occipital bone and the petrous part of the temporal bones in the skull. The foramen contains the inferior petrosal sinus; the transverse sinus; some meningeal branches of the occipital and ascending pharyngeal arteries; and the glossopharyngeal, vagus, and accessory nerves." [http://medical-dictionary.thefreedictionary.com/jugular+foramen] is_a: VHOG:0001760 ! foramen relationship: part_of VHOG:0000288 ! chondrocranium [Term] id: VHOG:0001114 name: pars tuberalis relationship: part_of VHOG:0000141 ! adenohypophysis [Term] id: VHOG:0001115 name: accessory XI nerve spinal component relationship: part_of VHOG:0000699 ! accessory XI nerve relationship: part_of VHOG:0000824 ! spinal nerve [Term] id: VHOG:0001119 name: neural lumen def: "Spinal cord structure that is part of the ventricular system and is filled with cerebral-spinal fluid and runs the length of the spinal cord." [ZFA:0000938] synonym: "canalis centralis" RELATED [] synonym: "central canal" RELATED [] synonym: "neurocoel" RELATED [] xref: TAO:0000938 relationship: part_of VHOG:0000005 ! brain ventricular system relationship: part_of VHOG:0000601 ! spinal cord [Term] id: VHOG:0001120 name: humerus cartilage condensation relationship: part_of VHOG:0000343 ! forelimb stylopodium [Term] id: VHOG:0001121 name: Meckel's cartilage pre-cartilage condensation relationship: part_of VHOG:0000510 ! ventral pharyngeal arch 1 [Term] id: VHOG:0001123 name: carpus cartilage condensation relationship: part_of VHOG:0000344 ! forelimb autopodium [Term] id: VHOG:0001124 name: basioccipital cartilage condensation relationship: part_of VHOG:0000288 ! chondrocranium [Term] id: VHOG:0001125 name: scapula cartilage condensation relationship: part_of VHOG:0000335 ! pectoral girdle and thoracic body wall [Term] id: VHOG:0001126 name: iliac cartilage condensation relationship: part_of VHOG:0000305 ! pelvic girdle [Term] id: VHOG:0001127 name: medial rectus extraocular muscle xref: TAO:0000301 is_a: VHOG:0000549 ! extraocular skeletal muscle [Term] id: VHOG:0001128 name: dorsal rectus extraocular muscle synonym: "superior rectus extraocular muscle" RELATED [] xref: TAO:0000345 is_a: VHOG:0000549 ! extraocular skeletal muscle [Term] id: VHOG:0001129 name: lateral rectus extraocular muscle xref: TAO:0000383 is_a: VHOG:0000549 ! extraocular skeletal muscle [Term] id: VHOG:0001130 name: ventral rectus extraocular muscle synonym: "inferior rectus extraocular muscle" RELATED [] xref: TAO:0000457 is_a: VHOG:0000549 ! extraocular skeletal muscle [Term] id: VHOG:0001131 name: dorsal oblique extraocular muscle synonym: "superior oblique extraocular muscle" RELATED [] xref: TAO:0000738 is_a: VHOG:0000549 ! extraocular skeletal muscle [Term] id: VHOG:0001132 name: ventral oblique extraocular muscle synonym: "inferior oblique extraocular muscle" RELATED [] xref: TAO:0000861 is_a: VHOG:0000549 ! extraocular skeletal muscle [Term] id: VHOG:0001133 name: pulmonary vein def: "One of two pairs of large vessels that return oxygenated blood from each lung to the left atrium of the heart." [http://medical-dictionary.thefreedictionary.com/pulmonary+vein] is_a: VHOG:0001743 ! vein [Term] id: VHOG:0001134 name: pulmonary trunk def: "An arterial trunk with origin from the right ventricle of the heart, and dividing into the right and left pulmonary arteries, which enter the corresponding lungs and branch with the bronchi." [http://medical-dictionary.thefreedictionary.com/pulmonary+trunk] is_a: VHOG:0001251 ! artery [Term] id: VHOG:0001135 name: ductus deferens synonym: "vas deferens" RELATED [] relationship: part_of VHOG:0000725 ! male reproductive system [Term] id: VHOG:0001136 name: oviduct def: "A passage through which ova leave the maternal body or pass to an organ communicating with the exterior of the body." [http://medical-dictionary.thefreedictionary.com/oviduct] synonym: "fallopian tube" RELATED [] synonym: "uterine tube" RELATED [] relationship: part_of VHOG:0000726 ! female reproductive system [Term] id: VHOG:0001137 name: uterus def: "The hollow muscular organ in female mammals in which the blastocyst normally becomes embedded and in which the developing embryo and fetus is nourished. Its cavity opens into the vagina below and into a uterine tube on either side." [http://medical-dictionary.thefreedictionary.com/uterus] synonym: "womb" RELATED [] relationship: part_of VHOG:0000726 ! female reproductive system [Term] id: VHOG:0001138 name: vagina def: "The genital canal in the female, leading from the opening of the vulva to the cervix of the uterus." [http://medical-dictionary.thefreedictionary.com/vagina] relationship: part_of VHOG:0000726 ! female reproductive system [Term] id: VHOG:0001141 name: adrenal gland - interrenal gland synonym: "adrenal - interrenal gland" RELATED [] synonym: "suprarenal gland - interrenal gland" RELATED [] xref: TAO:0001345 xref: TAO:0001346 relationship: part_of VHOG:0000038 ! mesonephros relationship: part_of VHOG:0000098 ! endocrine system [Term] id: VHOG:0001142 name: vertebral column def: "The vertebral column consists of a series of vertebrae connected by ligaments. It provides a supporting axis for the body and protects the spinal cord." [http://medical-dictionary.thefreedictionary.com/vertebral+column] synonym: "spinal column" RELATED [] xref: TAO:0001559 is_a: VHOG:0000317 ! axial skeleton [Term] id: VHOG:0001143 name: vertebra def: "All serially repeated ossified, cartilaginous, and ligamentous elements around the notochord." [ZFA:0001189] xref: TAO:0001189 is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0001142 ! vertebral column [Term] id: VHOG:0001144 name: semicircular canal synonym: "osseus semicircular canal" RELATED [] relationship: part_of VHOG:0001219 ! osseus labyrinth [Term] id: VHOG:0001145 name: auditory tube def: "The narrow channel connecting the nasopharynx and the middle ear." [http://medical-dictionary.thefreedictionary.com/auditory+tube] synonym: "Eustachian tube" RELATED [] synonym: "pharyngotympanic tube" RELATED [] relationship: part_of VHOG:0000312 ! middle ear [Term] id: VHOG:0001146 name: tympanic membrane def: "The thin membrane which closes externally the cavity of the middle ear and is deeply sited at the bottom of the external auditory meatus." [ISBN:978-0828893114] synonym: "ear drum" RELATED [] synonym: "tympanum" RELATED [] relationship: part_of VHOG:0000311 ! external ear relationship: part_of VHOG:0000312 ! middle ear [Term] id: VHOG:0001147 name: otic pit def: "A depression appearing in each otic placode, marking the beginnning of embryonic development of the internal ear." [http://medical-dictionary.thefreedictionary.com/Otic+pit] relationship: part_of VHOG:0000284 ! inner ear [Term] id: VHOG:0001148 name: otic vesicle def: "One of the paired sacs of invaginated ectoderm that develop into the membranous labyrinth of the internal ear." [http://www.biology-online.org/dictionary/Otic_vesicle] synonym: "acoustic vesicle" RELATED [] synonym: "auditory vesicle" RELATED [] synonym: "ear vesicle" RELATED [] synonym: "otocyst" RELATED [] xref: TAO:0000051 relationship: part_of VHOG:0000284 ! inner ear [Term] id: VHOG:0001149 name: lacrimal bone - infraorbital 1 synonym: "lachrymal bone - infraorbital 1" RELATED [] synonym: "lacrimal - infraorbital 1" RELATED [] synonym: "lacrymal bone - infraorbital 1" RELATED [] xref: TAO:0000223 is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000315 ! viscerocranium relationship: part_of VHOG:0001665 ! dermatocranium [Term] id: VHOG:0001150 name: supraoccipital bone xref: TAO:0000595 is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000288 ! chondrocranium [Term] id: VHOG:0001151 name: exoccipital bone xref: TAO:0000661 is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000288 ! chondrocranium [Term] id: VHOG:0001152 name: basioccipital bone xref: TAO:0000472 is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000288 ! chondrocranium [Term] id: VHOG:0001153 name: orbitosphenoid xref: TAO:0000253 is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000288 ! chondrocranium relationship: part_of VHOG:0000315 ! viscerocranium [Term] id: VHOG:0001155 name: ulna cartilage condensation relationship: part_of VHOG:0000341 ! forelimb zeugopodium [Term] id: VHOG:0001156 name: pectoral girdle def: "Arched skeletal structure that supports the forelimbs." [XAO:0003063] synonym: "shoulder girdle" RELATED [] xref: TAO:0000407 is_a: VHOG:0001737 ! anatomical cluster relationship: part_of VHOG:0001666 ! appendicular skeleton [Term] id: VHOG:0001157 name: extraembryonic umbilical artery is_a: VHOG:0001251 ! artery relationship: part_of VHOG:0000274 ! extraembryonic arterial system [Term] id: VHOG:0001158 name: humerus def: "Proximal bone of the forelimb." [Bgee:curator "Bgee"] is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000342 ! shoulder relationship: part_of VHOG:0000343 ! forelimb stylopodium relationship: part_of VHOG:0001256 ! forelimb skeleton [Term] id: VHOG:0001159 name: femur def: "Proximal bone of the hindlimb." [XAO:0003214 "adapted from"] is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000346 ! hip relationship: part_of VHOG:0000349 ! hindlimb stylopodium relationship: part_of VHOG:0001255 ! hindlimb skeleton [Term] id: VHOG:0001160 name: tarsus is_a: VHOG:0001737 ! anatomical cluster relationship: part_of VHOG:0000350 ! hindlimb autopodium relationship: part_of VHOG:0001255 ! hindlimb skeleton [Term] id: VHOG:0001161 name: carpus is_a: VHOG:0001737 ! anatomical cluster relationship: part_of VHOG:0000344 ! forelimb autopodium relationship: part_of VHOG:0001256 ! forelimb skeleton [Term] id: VHOG:0001162 name: optic pit def: "A small indentation in the central part of the optic placode." [PMID:4051192 "Müller F, O'Rahilly R, The first appearance of the neural tube and optic primordium in the human embryo at stage 10. Anatomy and Embryology (1985)"] relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0001163 name: lens vesicle def: "A vesicle formed from the lens pit of the embryo, developing into the crystalline lens." [http://medical-dictionary.thefreedictionary.com/lens+vesicle] relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0001165 name: retinal photoreceptor layer def: "The layer within the retina where the photoreceptor cell receptor segments reside." [ZFA:0000143] synonym: "layer of rods and cones" RELATED [] synonym: "retina photoreceptor layer" RELATED [] xref: TAO:0000143 relationship: part_of VHOG:0000535 ! neural retinal epithelium [Term] id: VHOG:0001166 name: retinal ganglion cell layer synonym: "retina ganglion cell layer" RELATED [] xref: TAO:0000024 relationship: part_of VHOG:0000535 ! neural retinal epithelium [Term] id: VHOG:0001167 name: retinal inner nuclear layer synonym: "intermediate cell layer" RELATED [] synonym: "retina inner nuclear layer" RELATED [] xref: TAO:0000119 relationship: part_of VHOG:0000535 ! neural retinal epithelium [Term] id: VHOG:0001168 name: retinal inner plexiform layer def: "The layer within the retina where the bipolar cells synapse with the dendrites of the ganglion cells." [ZFA:0001329] synonym: "retina inner plexiform layer" RELATED [] xref: TAO:0001329 relationship: part_of VHOG:0000535 ! neural retinal epithelium [Term] id: VHOG:0001169 name: retina nerve fiber layer def: "Fiber layer adjacent the retinal ganglion cell layer which is comprised of their axons as they traverse to the optic nerve." [ZFA:0001619] synonym: "optic fiber layer" RELATED [] xref: TAO:0002212 relationship: part_of VHOG:0000535 ! neural retinal epithelium [Term] id: VHOG:0001170 name: retinal outer nuclear layer def: "The layer within the retina where the photoreceptor cell bodies reside." [ZFA:0001464] synonym: "retina outer nuclear layer" RELATED [] xref: TAO:0001464 relationship: part_of VHOG:0000535 ! neural retinal epithelium [Term] id: VHOG:0001171 name: retinal outer plexiform layer def: "The layer within the retina where the bipolar cells synapse with the photoreceptor cells." [ZFA:0001330] synonym: "retina outer plexiform layer" RELATED [] xref: TAO:0001330 relationship: part_of VHOG:0000535 ! neural retinal epithelium [Term] id: VHOG:0001172 name: retina photoreceptor layer inner segment synonym: "photoreceptor inner segment layer" RELATED [] xref: TAO:0001465 relationship: part_of VHOG:0001165 ! retinal photoreceptor layer [Term] id: VHOG:0001173 name: retina photoreceptor layer outer segment synonym: "photoreceptor outer segment layer" RELATED [] xref: TAO:0001466 relationship: part_of VHOG:0001165 ! retinal photoreceptor layer [Term] id: VHOG:0001174 name: accessory XI nerve cranial component relationship: part_of VHOG:0000699 ! accessory XI nerve [Term] id: VHOG:0001175 name: corpus striatum synonym: "striatum" RELATED [] relationship: part_of VHOG:0001696 ! basal ganglia [Term] id: VHOG:0001176 name: pons def: "The part of the central nervous system lying between the medulla oblongata and the midbrain, ventral to the cerebellum." [http://medical-dictionary.thefreedictionary.com/pons] relationship: part_of VHOG:0000320 ! basal plate metencephalon relationship: part_of VHOG:0001457 ! brainstem [Term] id: VHOG:0001177 name: hippocampus synonym: "ammon's horn" RELATED [] relationship: part_of VHOG:0000722 ! cerebral cortex [Term] id: VHOG:0001178 name: pars intermedia xref: TAO:0001197 relationship: part_of VHOG:0000141 ! adenohypophysis [Term] id: VHOG:0001179 name: median eminence relationship: part_of VHOG:0000142 ! neurohypophysis [Term] id: VHOG:0001180 name: pars nervosa synonym: "neural lobe" RELATED [] synonym: "pars posterior" RELATED [] synonym: "posterior lobe" RELATED [] relationship: part_of VHOG:0000142 ! neurohypophysis [Term] id: VHOG:0001181 name: vestibulocochlear VIII nerve vestibular component relationship: part_of VHOG:0000695 ! vestibulocochlear VIII nerve [Term] id: VHOG:0001182 name: vestibulocochlear VIII nerve cochlear component relationship: part_of VHOG:0000695 ! vestibulocochlear VIII nerve [Term] id: VHOG:0001183 name: vestibulocochlear VIII ganglion cochlear component synonym: "spiral ganglion" RELATED [] relationship: part_of VHOG:0000696 ! vestibulocochlear VIII ganglion [Term] id: VHOG:0001184 name: urinary bladder fundus region relationship: part_of VHOG:0000740 ! urinary bladder [Term] id: VHOG:0001185 name: ultimobranchial body def: "The glandular tissue originating from the fifth branchial pouch which combines with the buccal cavity outgrowth to form the thyroid and contributes calcitonin-secreting cells to the gland." [http://medical-dictionary.thefreedictionary.com/ultimobranchial+body] xref: TAO:0001448 relationship: part_of VHOG:0000098 ! endocrine system [Term] id: VHOG:0001186 name: cloaca def: "A common passage for fecal, urinary, and reproductive discharge in most lower vertebrates as well as the terminal end of the hindgut before division into rectum, bladder, and genital primordia in mammalian embryos." [http://medical-dictionary.thefreedictionary.com/cloaca] synonym: "cloacal chamber" RELATED [] xref: TAO:0000330 relationship: part_of VHOG:0000309 ! gut [Term] id: VHOG:0001187 name: urogenital membrane def: "Ventral part of the cloacal membrane separating the gut from the fetus external environment." [http://medical-dictionary.thefreedictionary.com/urogenital+membrane] relationship: part_of VHOG:0000286 ! urogenital system [Term] id: VHOG:0001188 name: parathyroid gland def: "Any one of several small structures, usually four, attached to the dorsal surfaces of the lateral lobes of the thyroid gland." [http://medical-dictionary.thefreedictionary.com/parathyroid+gland] synonym: "parathyroid" RELATED [] relationship: part_of VHOG:0000098 ! endocrine system [Term] id: VHOG:0001189 name: foramen ovale def: "An aperture in the great wing of the sphenoid for vessels and nerves." [http://medical-dictionary.thefreedictionary.com/foramen+ovale] is_a: VHOG:0001760 ! foramen relationship: part_of VHOG:0000288 ! chondrocranium [Term] id: VHOG:0001190 name: bone def: "The hard form of connective tissue that constitutes the majority of the skeleton." [XAO:0000169] synonym: "bone organ" RELATED [] xref: TAO:0001514 is_a: VHOG:0001757 ! portion of tissue relationship: part_of VHOG:0001254 ! skeletal system [Term] id: VHOG:0001192 name: sartorius is_a: VHOG:0000319 ! skeletal muscle [Term] id: VHOG:0001193 name: gastrocnemius def: "The most superficial calf muscle in the posterior part of the leg." [http://medical-dictionary.thefreedictionary.com/gastrocnemius] is_a: VHOG:0000319 ! skeletal muscle [Term] id: VHOG:0001194 name: posterior vena cava synonym: "caudal vena cava" RELATED [] synonym: "inferior vena cava" RELATED [] is_a: VHOG:0001743 ! vein [Term] id: VHOG:0001195 name: anterior vena cava synonym: "cranial vena cava" RELATED [] synonym: "superior vena cava" RELATED [] is_a: VHOG:0001743 ! vein [Term] id: VHOG:0001196 name: arch of aorta def: "The curving portion between the ascending aorta and the descending aorta, giving rise to the brachiocephalic trunk, the left common carotid artery, and the left subclavian artery." [http://medical-dictionary.thefreedictionary.com/arch+of+aorta] synonym: "aortic arch" RELATED [] is_a: VHOG:0001523 ! aorta [Term] id: VHOG:0001197 name: cardinal vein xref: TAO:0000096 is_a: VHOG:0001743 ! vein [Term] id: VHOG:0001198 name: cloacal membrane def: "A membrane that separates the proctodeum and the hindgut in the early embryo." [ISBN:978-0072528305 "Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.497"] relationship: part_of VHOG:0000395 ! anal region [Term] id: VHOG:0001199 name: paramesonephric duct def: "Either of the paired embryonic ducts developing into the uterine tubes, uterus, and vagina in the female and becoming largely obliterated in the male." [http://medical-dictionary.thefreedictionary.com/paramesonephric+duct] synonym: "mullerian duct" RELATED [] relationship: part_of VHOG:0000725 ! male reproductive system relationship: part_of VHOG:0000726 ! female reproductive system [Term] id: VHOG:0001200 name: anterior neural plate def: "The portion of neural plate anterior to the mid-hindbrain junction." [XAO:0000045] synonym: "pre-chordal neural plate" RELATED [] xref: TAO:0007014 xref: TAO:0007016 relationship: part_of VHOG:0000068 ! neural plate [Term] id: VHOG:0001201 name: posterior neural plate def: "The portion of neural plate posterior to the mid-hindbrain junction." [XAO:0000046] synonym: "chordal neural plate" RELATED [] xref: TAO:0007015 xref: TAO:0007017 relationship: part_of VHOG:0000068 ! neural plate [Term] id: VHOG:0001202 name: primitive streak - blastopore - germ ring xref: TAO:0000111 relationship: part_of VHOG:0000671 ! whole organism relationship: part_of VHOG:0001766 ! embryo [Term] id: VHOG:0001203 name: pharyngeal pouch def: "Outpocketings of pharyngeal endoderm that interdigitate with the neural crest derived pharyngeal arches." [ZFA:0001106] synonym: "visceral pouch" RELATED [] xref: TAO:0001106 relationship: part_of VHOG:0000155 ! pharyngeal arch relationship: part_of VHOG:0000462 ! pharynx [Term] id: VHOG:0001204 name: pharyngeal arch 5 synonym: "5th pharyngeal arch" RELATED [] synonym: "5th visceral arch" RELATED [] synonym: "fifth pharyngeal arch" RELATED [] synonym: "fifth visceral arch" RELATED [] synonym: "visceral arch 5" RELATED [] xref: TAO:0001600 is_a: VHOG:0000155 ! pharyngeal arch relationship: part_of VHOG:0001214 ! gill [Term] id: VHOG:0001205 name: pharyngeal arch 6 synonym: "6th pharyngeal arch" RELATED [] synonym: "6th visceral arch" RELATED [] synonym: "sixth pharyngeal arch" RELATED [] synonym: "sixth visceral arch" RELATED [] synonym: "visceral arch 6" RELATED [] xref: TAO:0001601 is_a: VHOG:0000155 ! pharyngeal arch relationship: part_of VHOG:0001214 ! gill [Term] id: VHOG:0001206 name: pharyngeal pouch 5 synonym: "5th pharyngeal pouch" RELATED [] synonym: "5th visceral pouch" RELATED [] synonym: "fifth pharyngeal pouch" RELATED [] synonym: "fifth visceral pouch" RELATED [] synonym: "visceral pouch 5" RELATED [] xref: TAO:0001133 is_a: VHOG:0001203 ! pharyngeal pouch [Term] id: VHOG:0001207 name: cartilage def: "Portion of tissue which is connective tissue composed of collagen and/or elastin fibers and chondrocytes. Cartilage is avascular and provides both skeletal functions and a framework upon which bone is deposited." [ZFA:0001501] xref: TAO:0001501 is_a: VHOG:0001757 ! portion of tissue relationship: part_of VHOG:0001254 ! skeletal system [Term] id: VHOG:0001208 name: vagal neural crest xref: TAO:0000818 is_a: VHOG:0000057 ! neural crest relationship: part_of VHOG:0000170 ! mesenchyme [Term] id: VHOG:0001209 name: facial neural crest def: "Cranial neural crest that is part of the facial region." [ZFA:0000875] xref: TAO:0000875 is_a: VHOG:0000063 ! cranial neural crest relationship: part_of VHOG:0000170 ! mesenchyme [Term] id: VHOG:0001210 name: neural crest hindbrain def: "Cranial neural crest that is part of the hindbrain." [Bgee:curator "Bgee"] synonym: "rhombencephalic neural crest" RELATED [] is_a: VHOG:0000063 ! cranial neural crest relationship: part_of VHOG:0001211 ! neural fold hindbrain [Term] id: VHOG:0001211 name: neural fold hindbrain def: "Neural fold that is part of the hindbrain." [Bgee:curator "Bgee"] synonym: "neural fold rhombencephalon" RELATED [] relationship: part_of VHOG:0000070 ! hindbrain [Term] id: VHOG:0001212 name: notochordal plate def: "The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord." [DOI:10.1159/000068214, DOI:10.1002/aja.1002010309] relationship: part_of VHOG:0000199 ! notochord [Term] id: VHOG:0001213 name: notochordal process relationship: part_of VHOG:0000199 ! notochord [Term] id: VHOG:0001214 name: gill def: "The respiratory organ of most aquatic animals that breathe water to obtain oxygen, consisting of a filamentous structure of vascular membranes across which dissolved gases are exchanged." [http://www.thefreedictionary.com/gill] xref: TAO:0000354 is_a: VHOG:0001723 ! compound organ relationship: part_of VHOG:0000202 ! respiratory system [Term] id: VHOG:0001215 name: arterial system endothelium is_a: VHOG:0001217 ! cardiovascular system endothelium relationship: part_of VHOG:0001251 ! artery [Term] id: VHOG:0001216 name: venous system endothelium synonym: "veinous endothelium" RELATED [] is_a: VHOG:0001217 ! cardiovascular system endothelium relationship: part_of VHOG:0001743 ! vein [Term] id: VHOG:0001217 name: cardiovascular system endothelium def: "Simple squamous epithelium which lines blood vessels and the heart." [ZFA:0001639] synonym: "angioblasts" RELATED [] synonym: "vascular endothelium" RELATED [] is_a: VHOG:0000387 ! epithelium relationship: part_of VHOG:0000302 ! cardiovascular system [Term] id: VHOG:0001218 name: bone marrow relationship: part_of VHOG:0001190 ! bone relationship: part_of VHOG:0001247 ! immune system relationship: part_of VHOG:0001624 ! hematopoietic system [Term] id: VHOG:0001219 name: osseus labyrinth synonym: "bony labyrinth" RELATED [] relationship: part_of VHOG:0000284 ! inner ear relationship: part_of VHOG:0001553 ! temporal bone petrous part [Term] id: VHOG:0001220 name: osseus labyrinth vestibule def: "The vestibule is the central part of the osseous labyrinth, and is situated medial to the tympanic cavity, behind the cochlea, and in front of the semicircular canals." [http://en.wikipedia.org/wiki/Vestibule_of_the_ear] relationship: part_of VHOG:0001219 ! osseus labyrinth [Term] id: VHOG:0001221 name: blastomere def: "An undifferentiated cell produced by early cleavages of the fertilized egg (zygote)." [ZFA:0009177] synonym: "blastoderm cell" RELATED [] xref: TAO:0009177 is_a: VHOG:0001533 ! cell relationship: part_of VHOG:0001766 ! embryo [Term] id: VHOG:0001222 name: primitive endoderm synonym: "endomesoderm" RELATED [] synonym: "mesendoderm" RELATED [] is_a: VHOG:0001223 ! primary germ layer relationship: part_of VHOG:0000742 ! inner cell mass relationship: part_of VHOG:0001202 ! primitive streak - blastopore - germ ring [Term] id: VHOG:0001223 name: primary germ layer def: "A layer of cells produced during the process of gastrulation during the early development of the animal embryo, which is distinct from other such layers of cells, as an early step of cell differentiation. The types of germ layers are the endoderm, ectoderm, and mesoderm." [XAO:0003011] synonym: "embryonic germ layer" RELATED [] synonym: "germ layer" RELATED [] xref: TAO:0001122 is_a: VHOG:0001757 ! portion of tissue relationship: part_of VHOG:0000671 ! whole organism [Term] id: VHOG:0001224 name: brain ventricular zone synonym: "VZ" RELATED [] xref: TAO:0001083 relationship: part_of VHOG:0000005 ! brain ventricular system [Term] id: VHOG:0001225 name: left atrium myocardium def: "Myocardium that is part of the left atrium." [Bgee:curator "Bgee"] synonym: "left atrium cardiac muscle" RELATED [] is_a: VHOG:0000602 ! atrium myocardium relationship: part_of VHOG:0000369 ! left atrium [Term] id: VHOG:0001226 name: left atrium endocardium def: "Endocardium that is part of the left atrium." [Bgee:curator "Bgee"] synonym: "left atrium endocardial tissue" RELATED [] is_a: VHOG:0000606 ! atrium endocardium relationship: part_of VHOG:0000369 ! left atrium [Term] id: VHOG:0001227 name: right atrium myocardium def: "Myocardium that is part of the right atrium." [Bgee:curator "Bgee"] synonym: "right atrium cardiac muscle" RELATED [] is_a: VHOG:0000602 ! atrium myocardium relationship: part_of VHOG:0000328 ! right atrium [Term] id: VHOG:0001228 name: right atrium endocardium def: "Endocardium that is part of the right atrium." [Bgee:curator "Bgee"] synonym: "right atrium endocardial tissue" RELATED [] is_a: VHOG:0000606 ! atrium endocardium relationship: part_of VHOG:0000328 ! right atrium [Term] id: VHOG:0001229 name: left auricle relationship: part_of VHOG:0000369 ! left atrium [Term] id: VHOG:0001230 name: left auricle myocardium def: "Myocardium that is part of the left auricle." [Bgee:curator "Bgee"] synonym: "left auricle cardiac muscle" RELATED [] is_a: VHOG:0000083 ! heart myocardium relationship: part_of VHOG:0001229 ! left auricle [Term] id: VHOG:0001231 name: left auricle endocardium def: "Endocardium that is part of the left auricle." [Bgee:curator "Bgee"] synonym: "left auricle endocardial tissue" RELATED [] is_a: VHOG:0000084 ! heart endocardium relationship: part_of VHOG:0001229 ! left auricle [Term] id: VHOG:0001232 name: right auricle relationship: part_of VHOG:0000328 ! right atrium [Term] id: VHOG:0001233 name: left ventricle endocardium def: "Endocardium that is part of the left ventricle." [Bgee:curator "Bgee"] synonym: "left ventricle endocardial tissue" RELATED [] is_a: VHOG:0000607 ! ventricle endocardium relationship: part_of VHOG:0000718 ! heart left ventricle [Term] id: VHOG:0001234 name: left ventricle myocardium def: "Myocardium that is part of the left ventricle." [Bgee:curator "Bgee"] synonym: "left ventricle cardiac muscle" RELATED [] is_a: VHOG:0000604 ! ventricle myocardium relationship: part_of VHOG:0000718 ! heart left ventricle [Term] id: VHOG:0001235 name: right ventricle endocardium def: "Endocardium that is part of the right ventricle." [Bgee:curator "Bgee"] synonym: "right ventricle endocardial tissue" RELATED [] is_a: VHOG:0000607 ! ventricle endocardium relationship: part_of VHOG:0000717 ! heart right ventricle [Term] id: VHOG:0001236 name: right ventricle myocardium def: "Myocardium that is part of the right ventricle." [Bgee:curator "Bgee"] synonym: "right ventricle cardiac muscle" RELATED [] is_a: VHOG:0000604 ! ventricle myocardium relationship: part_of VHOG:0000717 ! heart right ventricle [Term] id: VHOG:0001237 name: pronephric glomerulus def: "The filtration unit of the pronephric kidney." [XAO:0000318] synonym: "pronephric glomera" RELATED [] synonym: "pronephric glomus" RELATED [] xref: TAO:0001557 relationship: part_of VHOG:0000037 ! pronephros [Term] id: VHOG:0001238 name: mesonephric glomerulus xref: TAO:0001288 relationship: part_of VHOG:0000038 ! mesonephros [Term] id: VHOG:0001239 name: pronephric mesoderm synonym: "pronephric anlage" RELATED [] synonym: "pronephric bulge" RELATED [] synonym: "pronephric primordium" RELATED [] xref: TAO:0000067 xref: TAO:0001070 relationship: part_of VHOG:0000087 ! intermediate mesoderm [Term] id: VHOG:0001240 name: nephric cord synonym: "nephrogenic cord" RELATED [] relationship: part_of VHOG:0000286 ! urogenital system [Term] id: VHOG:0001241 name: induced blastemal cells is_a: VHOG:0001533 ! cell relationship: part_of VHOG:0000714 ! metanephros cortex [Term] id: VHOG:0001242 name: metanephric glomerulus relationship: part_of VHOG:0001262 ! metanephric corpuscle [Term] id: VHOG:0001243 name: lateral line system def: "A sensory system on the surface of the animal, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the animal through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." [ZFA:0000034 "adapted from"] synonym: "lateral line organs" RELATED [] synonym: "lateral line stitches" RELATED [] xref: TAO:0000034 is_a: VHOG:0001674 ! sensory system relationship: part_of VHOG:0000399 ! peripheral nervous system [Term] id: VHOG:0001244 name: myotome def: "Portion of the somites giving rise to body wall muscle masses." [ZFA:0001056] xref: TAO:0001056 is_a: VHOG:0001245 ! muscle relationship: part_of VHOG:0000191 ! somite [Term] id: VHOG:0001245 name: muscle def: "A body tissue consisting of long cells that contract when stimulated and produce motion." [XAO:0000172] xref: TAO:0005145 is_a: VHOG:0001757 ! portion of tissue relationship: part_of VHOG:0001275 ! musculoskeletal system [Term] id: VHOG:0001246 name: smooth muscle is_a: VHOG:0001245 ! muscle [Term] id: VHOG:0001247 name: immune system def: "Anatomical system that protects the body from foreign substances, cells, and tissues by producing the immune response and that includes especially the thymus, spleen, lymphoid tissue, lymphocytes including the B cells and T cells, and antibodies." [XAO:0003152] xref: TAO:0001159 is_a: VHOG:0001725 ! anatomical system [Term] id: VHOG:0001248 name: circulatory system def: "Anatomical system that has as its parts the blood and lymph vessels." [XAO:0001010] synonym: "vascular system" RELATED [] synonym: "vasculature" RELATED [] xref: TAO:0001079 xref: TAO:0005076 is_a: VHOG:0001725 ! anatomical system relationship: part_of VHOG:0000302 ! cardiovascular system [Term] id: VHOG:0001249 name: lymph vessel def: "A vessel that contains or conveys lymph." [XAO:0000375] synonym: "lymphatic vessel" RELATED [] relationship: part_of VHOG:0000842 ! lymphatic system relationship: part_of VHOG:0001248 ! circulatory system [Term] id: VHOG:0001250 name: blood vessel def: "Any of the vessels through which blood circulates in the body." [XAO:0001011] synonym: "vasculature" RELATED [] relationship: part_of VHOG:0001248 ! circulatory system [Term] id: VHOG:0001251 name: artery def: "Any of the tubular branching vessels that carry blood from the heart through the body." [XAO:0000114] xref: TAO:0000005 is_a: VHOG:0001250 ! blood vessel relationship: part_of VHOG:0000273 ! arterial system [Term] id: VHOG:0001253 name: capillary def: "Any of the smallest blood vessels connecting arterioles with venules." [XAO:0000116] is_a: VHOG:0001250 ! blood vessel [Term] id: VHOG:0001254 name: skeletal system def: "Anatomical system that provides physical support to the organism." [XAO:0003060] synonym: "skeleton" RELATED [] xref: TAO:0000434 is_a: VHOG:0001725 ! anatomical system relationship: part_of VHOG:0001275 ! musculoskeletal system [Term] id: VHOG:0001255 name: hindlimb skeleton def: "Skeletal structure of the paired, posterior appendages." [XAO:0003062] synonym: "hind limb skeleton" RELATED [] synonym: "hindlimb bone" RELATED [] is_a: VHOG:0001666 ! appendicular skeleton relationship: part_of VHOG:0000337 ! hindlimb [Term] id: VHOG:0001256 name: forelimb skeleton def: "Skeletal structure of the paired, anterior appendages." [XAO:0003061] synonym: "forelimb bone" RELATED [] is_a: VHOG:0001666 ! appendicular skeleton relationship: part_of VHOG:0001753 ! forelimb - pectoral fin [Term] id: VHOG:0001257 name: peritoneum def: "An epithelium that lines the peritoneal cavity." [ZFA:0005120] synonym: "peritonaeum" RELATED [] xref: TAO:0005120 is_a: VHOG:0000387 ! epithelium relationship: part_of VHOG:0000412 ! alimentary system relationship: part_of VHOG:0000852 ! peritoneal cavity [Term] id: VHOG:0001258 name: limb - fin bud xref: TAO:0001383 relationship: part_of VHOG:0001766 ! embryo [Term] id: VHOG:0001260 name: hindlimb bud synonym: "hind limb bud" RELATED [] is_a: VHOG:0001258 ! limb - fin bud [Term] id: VHOG:0001261 name: prostate gland relationship: part_of VHOG:0000725 ! male reproductive system [Term] id: VHOG:0001262 name: metanephric corpuscle relationship: part_of VHOG:0000719 ! metanephric nephron [Term] id: VHOG:0001263 name: mammary gland milk relationship: part_of VHOG:0000398 ! mammary gland [Term] id: VHOG:0001264 name: urethra relationship: part_of VHOG:0000723 ! renal system relationship: part_of VHOG:0000725 ! male reproductive system [Term] id: VHOG:0001265 name: epididymis relationship: part_of VHOG:0001135 ! ductus deferens [Term] id: VHOG:0001266 name: placenta relationship: part_of VHOG:0000726 ! female reproductive system [Term] id: VHOG:0001267 name: amniotic fluid relationship: part_of VHOG:0000726 ! female reproductive system [Term] id: VHOG:0001268 name: hair follicle relationship: part_of VHOG:0000403 ! integumental system [Term] id: VHOG:0001269 name: gum synonym: "gingiva" RELATED [] relationship: part_of VHOG:0000188 ! oral cavity relationship: part_of VHOG:0000453 ! lower jaw relationship: part_of VHOG:0000454 ! upper jaw [Term] id: VHOG:0001270 name: loop of Henle def: "A highly specialized segment of the mammalian kidney tubules, that dips into the medulla." [ISBN:978-0030223693 "Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.648"] is_a: VHOG:0001526 ! metanephric tubule [Term] id: VHOG:0001271 name: cardiac conducting system synonym: "impulse conducting system" RELATED [] xref: TAO:0005063 relationship: part_of VHOG:0000276 ! heart [Term] id: VHOG:0001272 name: ligament relationship: part_of VHOG:0001276 ! joint [Term] id: VHOG:0001273 name: lymph node synonym: "lymph gland" RELATED [] relationship: part_of VHOG:0000842 ! lymphatic system [Term] id: VHOG:0001274 name: sclera def: "The tough, usually white, outer coat of the eyeball, covering all the posterior surface and continuous anteriorly with the cornea." [http://medical-dictionary.thefreedictionary.com/sclera] relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0001275 name: musculoskeletal system def: "Anatomical system that provides locomotion and physical support to the organism." [XAO:0000168] synonym: "skeletal muscular system" RELATED [] is_a: VHOG:0001725 ! anatomical system [Term] id: VHOG:0001276 name: joint def: "Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue." [ZFA:0001596] xref: TAO:0000367 is_a: VHOG:0001737 ! anatomical cluster relationship: part_of VHOG:0001254 ! skeletal system relationship: part_of VHOG:0001753 ! forelimb - pectoral fin [Term] id: VHOG:0001277 name: amygdala synonym: "amygdaloid area" RELATED [] relationship: part_of VHOG:0001696 ! basal ganglia [Term] id: VHOG:0001278 name: cerebrospinal fluid def: "Portion of organism substance that is a clear fluid that occupies the subarachnoid space and the ventricular system around and inside the brain." [ZFA:0001626] synonym: "cerebral spinal fluid" RELATED [] synonym: "CSF" RELATED [] xref: TAO:0002184 is_a: VHOG:0001726 ! portion of organism substance relationship: part_of VHOG:0000157 ! brain [Term] id: VHOG:0001279 name: larynx relationship: part_of VHOG:0001404 ! laryngo-tracheal groove [Term] id: VHOG:0001280 name: pericardium def: "An epithelium that lines the pericardial cavity." [Bgee:curator "Bgee"] synonym: "pericardial sac" RELATED [] xref: TAO:0000054 is_a: VHOG:0000387 ! epithelium relationship: part_of VHOG:0000276 ! heart relationship: part_of VHOG:0000556 ! pericardial cavity [Term] id: VHOG:0001281 name: myometrium def: "The muscular wall of the uterus." [http://medical-dictionary.thefreedictionary.com/myometrium] synonym: "uterine smooth muscle" RELATED [] relationship: part_of VHOG:0001137 ! uterus [Term] id: VHOG:0001282 name: synovium synonym: "synovial membrane" RELATED [] relationship: part_of VHOG:0001276 ! joint [Term] id: VHOG:0001283 name: myocoele relationship: part_of VHOG:0001244 ! myotome [Term] id: VHOG:0001284 name: adipose tissue def: "Connective tissue in which fat is stored." [XAO:0003049] is_a: VHOG:0001757 ! portion of tissue [Term] id: VHOG:0001285 name: endometrium def: "The mucous membrane lining the uterus." [http://medical-dictionary.thefreedictionary.com/Endometrium] relationship: part_of VHOG:0001137 ! uterus [Term] id: VHOG:0001286 name: tendon def: "A fibrous, strong, connective tissue that connects muscle to bone." [XAO:0000173] is_a: VHOG:0001757 ! portion of tissue relationship: part_of VHOG:0001275 ! musculoskeletal system [Term] id: VHOG:0001287 name: spinal cord dorsal horn synonym: "dorsal horn spinal cord" RELATED [] xref: TAO:0000649 is_a: VHOG:0001768 ! grey matter relationship: part_of VHOG:0000899 ! alar column spinal cord [Term] id: VHOG:0001288 name: spinal cord ventral horn synonym: "ventral horn spinal cord" RELATED [] xref: TAO:0000702 is_a: VHOG:0001768 ! grey matter relationship: part_of VHOG:0000898 ! basal column spinal cord [Term] id: VHOG:0001295 name: meninx def: "Membrane covering the brain and spinal cord. It is represented by a single layer in fishes, two in amphibians, reptiles and birds and three in mammals (named dura mater, arachnoid and pia mater)." [http://medical-dictionary.thefreedictionary.com/meninges, ISBN:978-0072528305 "Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"] synonym: "meninges" RELATED [] xref: TAO:0001355 relationship: part_of VHOG:0000293 ! central nervous system [Term] id: VHOG:0001296 name: optic eminence relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0001297 name: tubotympanic recess def: "A diverticulum formed by the dorsal portion of the 1st pharyngeal pouch and that forms the middle ear cavity." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.73-74"] relationship: part_of VHOG:0000312 ! middle ear [Term] id: VHOG:0001298 name: tentorium cerebelli def: "The tentorium cerebelli or cerebellar tentorium (Latin: 'tent of the cerebellum') is an extension of the dura mater that separates the cerebellum from the inferior portion of the occipital lobes." [http://en.wikipedia.org/wiki/Tentorium_cerebelli] relationship: part_of VHOG:0000409 ! hindbrain dura mater [Term] id: VHOG:0001302 name: subarachnoid space diencephalon def: "Subarachnoid space that is part of the diencephalon." [Bgee:curator "Bgee"] relationship: part_of VHOG:0000009 ! diencephalon meninges [Term] id: VHOG:0001303 name: subarachnoid space hindbrain def: "Subarachnoid space that is part of the hindbrain." [Bgee:curator "Bgee"] synonym: "subarachnoid space rhombencephalon" RELATED [] relationship: part_of VHOG:0000011 ! hindbrain meninges [Term] id: VHOG:0001304 name: subarachnoid space midbrain def: "Subarachnoid space that is part of the midbrain." [Bgee:curator "Bgee"] synonym: "subarachnoid space mesencephalon" RELATED [] relationship: part_of VHOG:0000012 ! midbrain meninges [Term] id: VHOG:0001305 name: metacarpus cartilage condensation relationship: part_of VHOG:0000944 ! digit [Term] id: VHOG:0001306 name: appendix relationship: part_of VHOG:0001559 ! caecum [Term] id: VHOG:0001308 name: cricoid cartilage def: "The ringlike cartilage forming the caudal part of the larynx." [http://medical-dictionary.thefreedictionary.com/cricoid+cartilage] synonym: "innominate cartilage" RELATED [] is_a: VHOG:0001550 ! larynx cartilage [Term] id: VHOG:0001316 name: gluteus muscle is_a: VHOG:0000319 ! skeletal muscle relationship: part_of VHOG:0000305 ! pelvic girdle [Term] id: VHOG:0001317 name: ethmoid bone def: "A light spongy bone located between the eye sockets, forming part of the walls and septum of the superior nasal cavity, and containing perforations for the passage of olfactory nerve fibers." [http://medical-dictionary.thefreedictionary.com/ethmoid+bone] relationship: part_of VHOG:0000315 ! viscerocranium [Term] id: VHOG:0001318 name: radius cartilage condensation relationship: part_of VHOG:0000341 ! forelimb zeugopodium [Term] id: VHOG:0001321 name: testis cords synonym: "primitive sex cords" RELATED [] synonym: "testicular cords" RELATED [] relationship: part_of VHOG:0000252 ! testis [Term] id: VHOG:0001322 name: hindbrain venous system synonym: "rhombencephalon venous system" RELATED [] is_a: VHOG:0001328 ! brain venous system [Term] id: VHOG:0001323 name: frontal process relationship: part_of VHOG:0001371 ! nose process [Term] id: VHOG:0001324 name: frontal bone is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000288 ! chondrocranium relationship: part_of VHOG:0000331 ! vault of skull [Term] id: VHOG:0001325 name: hyoid bone relationship: part_of VHOG:0000315 ! viscerocranium relationship: part_of VHOG:0000462 ! pharynx [Term] id: VHOG:0001326 name: parietal bone xref: TAO:0000514 is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000288 ! chondrocranium relationship: part_of VHOG:0000331 ! vault of skull relationship: part_of VHOG:0001665 ! dermatocranium [Term] id: VHOG:0001327 name: interparietal bone synonym: "postparietal bone" RELATED [] xref: TAO:0000486 is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000288 ! chondrocranium relationship: part_of VHOG:0000331 ! vault of skull relationship: part_of VHOG:0001665 ! dermatocranium [Term] id: VHOG:0001328 name: brain venous system is_a: VHOG:0000277 ! venous system [Term] id: VHOG:0001338 name: basisphenoid cartilage condensation relationship: part_of VHOG:0000288 ! chondrocranium [Term] id: VHOG:0001339 name: ovigerous cords synonym: "primitive sex cords" RELATED [] relationship: part_of VHOG:0000251 ! ovary [Term] id: VHOG:0001342 name: penis foreskin relationship: part_of VHOG:0000727 ! penis [Term] id: VHOG:0001343 name: facial VII nerve chorda tympani branch relationship: part_of VHOG:0000706 ! facial VII nerve [Term] id: VHOG:0001344 name: crus commune relationship: part_of VHOG:0000238 ! semicircular duct relationship: part_of VHOG:0000289 ! utricle relationship: part_of VHOG:0001144 ! semicircular canal [Term] id: VHOG:0001345 name: trigeminal V nerve mandibular division relationship: part_of VHOG:0000704 ! trigeminal V nerve [Term] id: VHOG:0001346 name: trigeminal V nerve maxillary division relationship: part_of VHOG:0000704 ! trigeminal V nerve [Term] id: VHOG:0001347 name: vagus X nerve recurrent laryngeal branch relationship: part_of VHOG:0000736 ! vagal X nerve trunk relationship: part_of VHOG:0000737 ! vagus X nerve [Term] id: VHOG:0001348 name: Sertoli cell def: "A supporting cell projecting inward from the basement membrane of seminiferous tubules. They surround and nourish the developing male germ cells and secrete androgen binding protein. Their tight junctions with the spermatogonia and spermatocytes provide a blood-testis barrier." [ZFA:0009133] xref: TAO:0009133 is_a: VHOG:0001533 ! cell relationship: part_of VHOG:0001363 ! seminiferous tubule [Term] id: VHOG:0001349 name: trigeminal V nerve ophthalmic division relationship: part_of VHOG:0000704 ! trigeminal V nerve [Term] id: VHOG:0001351 name: biliary bud relationship: part_of VHOG:0000291 ! foregut-midgut junction relationship: part_of VHOG:0000294 ! liver and biliary system [Term] id: VHOG:0001352 name: oronasal cavity is_a: VHOG:0001728 ! anatomical space relationship: part_of VHOG:0000280 ! oral region [Term] id: VHOG:0001359 name: uterine cervix def: "The narrow caudal end of the uterus that opens into the vagina." [http://medical-dictionary.thefreedictionary.com/uterine+cervix] relationship: part_of VHOG:0001137 ! uterus [Term] id: VHOG:0001360 name: pineal gland stalk xref: TAO:0001292 relationship: part_of VHOG:0000051 ! pineal gland [Term] id: VHOG:0001361 name: claw synonym: "nail" RELATED [] relationship: part_of VHOG:0000403 ! integumental system relationship: part_of VHOG:0000944 ! digit [Term] id: VHOG:0001362 name: nail bed relationship: part_of VHOG:0001361 ! claw [Term] id: VHOG:0001363 name: seminiferous tubule def: "One of two or three twisted curved tubules in each lobule of the testis in which spermatogenesis occurs." [http://medical-dictionary.thefreedictionary.com/seminiferous+tubule] relationship: part_of VHOG:0000252 ! testis [Term] id: VHOG:0001364 name: auditory hillocks synonym: "auditory tubercles" RELATED [] relationship: part_of VHOG:0000311 ! external ear [Term] id: VHOG:0001365 name: thyroid cartilage def: "The largest cartilage of the larynx, having two broad processes that join anteriorly to form the Adam's apple." [http://medical-dictionary.thefreedictionary.com/thyroid+cartilage] is_a: VHOG:0001550 ! larynx cartilage [Term] id: VHOG:0001367 name: tegmentum xref: TAO:0000160 relationship: part_of VHOG:0000069 ! midbrain [Term] id: VHOG:0001370 name: nasal bone xref: TAO:0000365 is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000315 ! viscerocranium relationship: part_of VHOG:0001665 ! dermatocranium [Term] id: VHOG:0001371 name: nose process relationship: part_of VHOG:0000287 ! olfactory organ [Term] id: VHOG:0001372 name: non neural ectoderm xref: TAO:0001178 relationship: part_of VHOG:0000153 ! embryonic ectoderm [Term] id: VHOG:0001377 name: choroid plexus def: "A tuft of capillaries that project into the ventricles of the brain and secretes cerebral spinal fluid. The choroid plexus is covered by a cuboidal epithelium which maintains the integrity of the blood-brain barrier." [ZFA:0001443] xref: TAO:0001443 relationship: part_of VHOG:0000005 ! brain ventricular system [Term] id: VHOG:0001378 name: adrenal medulla synonym: "chromaffin cells" RELATED [] relationship: part_of VHOG:0001141 ! adrenal gland - interrenal gland [Term] id: VHOG:0001379 name: seminal vesicle def: "Either of a pair of pouchlike glands situated on each side of the male urinary bladder that secrete seminal fluid and nourish and promote the movement of spermatozoa through the urethra." [http://medical-dictionary.thefreedictionary.com/prominence] synonym: "seminal gland" RELATED [] relationship: part_of VHOG:0001135 ! ductus deferens [Term] id: VHOG:0001382 name: chordoneural hinge def: "Portion of tissue that is posterior to the developing notochord during tailbud extension." [ZFA:0001082] synonym: "chordo neural hinge" RELATED [] xref: TAO:0001082 is_a: VHOG:0001757 ! portion of tissue relationship: part_of VHOG:0000201 ! tail bud [Term] id: VHOG:0001383 name: posterior neural tube xref: TAO:0007037 relationship: part_of VHOG:0000307 ! neural tube [Term] id: VHOG:0001384 name: anterior neural tube xref: TAO:0007038 relationship: part_of VHOG:0000307 ! neural tube [Term] id: VHOG:0001385 name: bulbar ridge synonym: "spiral ridge" RELATED [] relationship: part_of VHOG:0000435 ! heart ventricle [Term] id: VHOG:0001388 name: tectum def: "The brain structure where the two separate inputs from the two eyes are combined into a single, integrated map." [XAO:0003226] synonym: "optic tectum" RELATED [] xref: TAO:0000445 is_a: VHOG:0000772 ! roof plate midbrain [Term] id: VHOG:0001390 name: tongue skeletal muscle relationship: part_of VHOG:0000419 ! tongue [Term] id: VHOG:0001391 name: rhomboid muscle synonym: "rhomboideus" RELATED [] is_a: VHOG:0000319 ! skeletal muscle [Term] id: VHOG:0001392 name: papillary muscle is_a: VHOG:0001245 ! muscle relationship: part_of VHOG:0001472 ! atrioventricular valve [Term] id: VHOG:0001393 name: semilunar valve is_a: VHOG:0000818 ! heart valve [Term] id: VHOG:0001394 name: outflow tract aortic component relationship: part_of VHOG:0000670 ! outflow tract [Term] id: VHOG:0001395 name: outflow tract pulmonary component relationship: part_of VHOG:0000670 ! outflow tract [Term] id: VHOG:0001396 name: extraembryonic vascular system is_a: VHOG:0000302 ! cardiovascular system [Term] id: VHOG:0001398 name: scapula xref: TAO:0000583 is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000335 ! pectoral girdle and thoracic body wall relationship: part_of VHOG:0000342 ! shoulder relationship: part_of VHOG:0001156 ! pectoral girdle relationship: part_of VHOG:0001256 ! forelimb skeleton [Term] id: VHOG:0001399 name: central tendon relationship: part_of VHOG:0000713 ! diaphragm [Term] id: VHOG:0001404 name: laryngo-tracheal groove relationship: part_of VHOG:0000382 ! lower respiratory tract [Term] id: VHOG:0001405 name: bulboventricular groove relationship: part_of VHOG:0000276 ! heart [Term] id: VHOG:0001407 name: sensory organ def: "Sensory organs are those organs or structures that receive information (stimuli) and translate this information into a signal recognizable to the nervous system." [ISBN:978-0198566694 "p.118"] relationship: part_of VHOG:0001674 ! sensory system [Term] id: VHOG:0001408 name: optic foramen def: "An aperture in the root of the lesser wing of the sphenoid bone transmitting the optic nerve." [http://medical-dictionary.thefreedictionary.com/optic+foramen] is_a: VHOG:0001760 ! foramen relationship: part_of VHOG:0000315 ! viscerocranium [Term] id: VHOG:0001410 name: ventricular layer lateral wall rhombomere relationship: part_of VHOG:0001020 ! laterall wall rhombomeres [Term] id: VHOG:0001413 name: marginal layer lateral wall rhombomere relationship: part_of VHOG:0001020 ! laterall wall rhombomeres [Term] id: VHOG:0001414 name: marginal layer lateral wall spinal cord relationship: part_of VHOG:0000513 ! lateral wall spinal cord [Term] id: VHOG:0001415 name: mantle layer lateral wall rhombomere relationship: part_of VHOG:0001020 ! laterall wall rhombomeres [Term] id: VHOG:0001417 name: Leydig cell xref: TAO:0009108 is_a: VHOG:0001533 ! cell relationship: part_of VHOG:0000252 ! testis [Term] id: VHOG:0001419 name: caudate nucleus def: "The caudate nucleus is a nucleus located within the basal ganglia of the brains of many animal species. The caudate nucleus is an important part of the brain's learning and memory system." [http://en.wikipedia.org/wiki/Caudate_nucleus] relationship: part_of VHOG:0001175 ! corpus striatum [Term] id: VHOG:0001423 name: liver left lobe relationship: part_of VHOG:0000257 ! liver [Term] id: VHOG:0001424 name: liver right lobe relationship: part_of VHOG:0000257 ! liver [Term] id: VHOG:0001427 name: 1st pharyngeal membrane relationship: part_of VHOG:0000296 ! pharyngeal arch 1 relationship: part_of VHOG:0000311 ! external ear [Term] id: VHOG:0001428 name: dorsal pancreatic bud synonym: "posterior pancreatic bud" RELATED [] xref: TAO:0001370 relationship: part_of VHOG:0000050 ! pancreas [Term] id: VHOG:0001429 name: ventral pancreatic bud synonym: "anterior pancreatic bud" RELATED [] xref: TAO:0001369 relationship: part_of VHOG:0000050 ! pancreas [Term] id: VHOG:0001431 name: eye anterior chamber def: "The part of the eyeball between the cornea and the iris, filled with aqueous humor." [http://medical-dictionary.thefreedictionary.com/anterior+chamber] relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0001433 name: stomach epithelium relationship: part_of VHOG:0000408 ! stomach [Term] id: VHOG:0001434 name: parotid gland epithelium relationship: part_of VHOG:0000308 ! parotid gland [Term] id: VHOG:0001436 name: bulbus cordis rostral half endocardium def: "Endocardium that is part of the bulbus cordis rostral half." [Bgee:curator "Bgee"] synonym: "bulbus cordis rostral half endocardial tissue" RELATED [] relationship: part_of VHOG:0000437 ! bulbus cordis rostral half [Term] id: VHOG:0001443 name: tooth epithelium relationship: part_of VHOG:0001733 ! tooth [Term] id: VHOG:0001445 name: lung alveolus relationship: part_of VHOG:0000262 ! bronchus relationship: part_of VHOG:0000310 ! lung - swim bladder [Term] id: VHOG:0001446 name: segmental bronchus is_a: VHOG:0000262 ! bronchus relationship: part_of VHOG:0000618 ! left lung relationship: part_of VHOG:0000831 ! right lung accessory lobe relationship: part_of VHOG:0000857 ! right lung caudal lobe relationship: part_of VHOG:0000859 ! right lung cranial lobe [Term] id: VHOG:0001448 name: pelvic part urogenital sinus relationship: part_of VHOG:0000414 ! urogenital sinus [Term] id: VHOG:0001449 name: phallic part urogenital sinus relationship: part_of VHOG:0000414 ! urogenital sinus [Term] id: VHOG:0001450 name: vesical part urogenital sinus relationship: part_of VHOG:0000414 ! urogenital sinus [Term] id: VHOG:0001456 name: putamen def: "The putamen is a round structure located at the base of the forebrain (telencephalon). The putamen and caudate nucleus together form the dorsal striatum. It is also one of the structures that comprises the basal ganglia." [http://en.wikipedia.org/wiki/Putamen] relationship: part_of VHOG:0001175 ! corpus striatum [Term] id: VHOG:0001457 name: brainstem def: "Multi-tissue structure that has as its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain." [ZFA:0001707] synonym: "brain stem" RELATED [] xref: TAO:0002156 is_a: VHOG:0001762 ! multi-tissue structure relationship: part_of VHOG:0000157 ! brain [Term] id: VHOG:0001458 name: vulva def: "The external genital organs of the female, including the labia majora, labia minora, clitoris, and vestibule of the vagina." [http://medical-dictionary.thefreedictionary.com/vulva] relationship: part_of VHOG:0000726 ! female reproductive system [Term] id: VHOG:0001459 name: lens equatorial epithelium relationship: part_of VHOG:0000169 ! lens relationship: part_of VHOG:0001163 ! lens vesicle [Term] id: VHOG:0001465 name: dental papilla xref: TAO:0005140 relationship: part_of VHOG:0001733 ! tooth [Term] id: VHOG:0001466 name: pyloric sphincter relationship: part_of VHOG:0000420 ! pyloric region [Term] id: VHOG:0001467 name: sweat gland def: "A gland that secretes sweat, found in the dermis or subcutaneous tissue, opening by a duct on the body surface." [http://medical-dictionary.thefreedictionary.com/sweat+gland] synonym: "sudoriferous gland" RELATED [] relationship: part_of VHOG:0000860 ! skin [Term] id: VHOG:0001468 name: sebaceous gland def: "Any of the numerous holocrine glands in the dermis that empty into a hair follicle and produce and secrete sebum." [http://medical-dictionary.thefreedictionary.com/sebaceous+gland] relationship: part_of VHOG:0000403 ! integumental system [Term] id: VHOG:0001469 name: dental pulp synonym: "tooth pulp" RELATED [] xref: TAO:0005141 relationship: part_of VHOG:0001733 ! tooth [Term] id: VHOG:0001470 name: foramen primum def: "First of the two openings to perforate the septum primum between the two atria of the embryonic heart." [http://medical-dictionary.thefreedictionary.com/foramen "adapted from"] synonym: "ostium primum" RELATED [] relationship: part_of VHOG:0000020 ! septum primum [Term] id: VHOG:0001471 name: foramen secundum def: "Second of the two openings to perforate the septum primum between the two atria of the embryonic heart." [http://medical-dictionary.thefreedictionary.com/foramen "adapted from"] synonym: "ostium secundum" RELATED [] relationship: part_of VHOG:0000020 ! septum primum [Term] id: VHOG:0001472 name: atrioventricular valve def: "Valve in the heart through which blood flows from the atria to the ventricles." [http://medical-dictionary.thefreedictionary.com/atrioventricular+valve] xref: TAO:0005064 is_a: VHOG:0000818 ! heart valve relationship: part_of VHOG:0000175 ! heart atrium relationship: part_of VHOG:0000435 ! heart ventricle [Term] id: VHOG:0001473 name: atrioventricular canal def: "The canal connecting the primitive atrium and ventricle in fishes and amniotes embryo." [http://medical-dictionary.thefreedictionary.com/atrioventricular+canal "adapted from"] synonym: "AV canal" RELATED [] xref: TAO:0001315 relationship: part_of VHOG:0000276 ! heart [Term] id: VHOG:0001474 name: atrioventricular node synonym: "AV node" RELATED [] xref: TAO:0005070 relationship: part_of VHOG:0001271 ! cardiac conducting system relationship: part_of VHOG:0001473 ! atrioventricular canal [Term] id: VHOG:0001475 name: glans penis relationship: part_of VHOG:0000727 ! penis [Term] id: VHOG:0001476 name: lacrimal gland relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0001477 name: hyaloid cavity def: "A depression in the front of the vitreous body, lodging the lens." [http://medical-dictionary.thefreedictionary.com/hyaloid+fossa "adapted from"] is_a: VHOG:0001728 ! anatomical space relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0001479 name: T cell def: "A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex." [ZFA:0009046] xref: TAO:0009046 xref: TAO:0009340 xref: TAO:0009341 is_a: VHOG:0001535 ! lymphocyte [Term] id: VHOG:0001480 name: B cell def: "A type of lymphocyte whose defining characteristic is the expression of an immunoglobulin complex." [ZFA:0009142] xref: TAO:0009142 is_a: VHOG:0001535 ! lymphocyte [Term] id: VHOG:0001481 name: adrenal cortex synonym: "interrenal tissue" RELATED [] relationship: part_of VHOG:0001141 ! adrenal gland - interrenal gland [Term] id: VHOG:0001482 name: fibroblast def: "A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules." [ZFA:0009026] xref: TAO:0009026 is_a: VHOG:0001533 ! cell relationship: part_of VHOG:0000152 ! embryonic mesoderm [Term] id: VHOG:0001483 name: neuron def: "Cell that is the basic unit of nervous tissue, each consisting of a body, an axon, and dendrites, and the purpose of which is to receive, conduct, and transmit impulses in the nervous system." [XAO:0003023] synonym: "nerve cell" RELATED [] xref: TAO:0009248 is_a: VHOG:0001533 ! cell relationship: part_of VHOG:0000402 ! nervous system [Term] id: VHOG:0001484 name: Rohon-Beard neuron def: "Type of neuron that is a primary mechanosensory cell, with peripheral neurites innervating the skin with free nerve endings." [XAO:0003022] synonym: "Rohon Beard cell" RELATED [] xref: TAO:0009150 is_a: VHOG:0001483 ! neuron [Term] id: VHOG:0001485 name: hematopoietic stem cell def: "A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system." [ZFA:0009014] synonym: "hemocytoblast" RELATED [] synonym: "HSC" RELATED [] xref: TAO:0009014 is_a: VHOG:0001533 ! cell relationship: part_of VHOG:0000118 ! lateral plate mesoderm relationship: part_of VHOG:0001624 ! hematopoietic system [Term] id: VHOG:0001486 name: midgut loop epithelium relationship: part_of VHOG:0000673 ! midgut loop [Term] id: VHOG:0001487 name: foregut-midgut junction epithelium relationship: part_of VHOG:0000291 ! foregut-midgut junction [Term] id: VHOG:0001494 name: hyoid muscle xref: TAO:0000521 is_a: VHOG:0001245 ! muscle relationship: part_of VHOG:0000297 ! pharyngeal arch 2 [Term] id: VHOG:0001495 name: parietal pleura is_a: VHOG:0000394 ! pleura [Term] id: VHOG:0001496 name: visceral pleura is_a: VHOG:0000394 ! pleura [Term] id: VHOG:0001497 name: pleuropericardial canal synonym: "pleuropericardial channel" RELATED [] relationship: part_of VHOG:0000713 ! diaphragm [Term] id: VHOG:0001498 name: pericardio-peritoneal canal def: "Each of the canal that connects the pericardial cavity with the peritoneal cavity and becomes a pleural cavity." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.42"] synonym: "pericardio-peritoneal channel" RELATED [] relationship: part_of VHOG:0000316 ! intraembryonic coelom [Term] id: VHOG:0001499 name: pleuropericardial folds def: "Each of the folds that grow out from the lateral part of the body wall. They fuse and meet with the dorsal and ventral mesentery of the foregut, separating the pleural cavities from the pericardial cavity." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.43-46"] synonym: "pleuropericardial membranes" RELATED [] relationship: part_of VHOG:0000713 ! diaphragm [Term] id: VHOG:0001505 name: pleuroperitoneal canal def: "Each of the canal that links the peritoneal cavity and the caudal part of a pleural cavity." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.46"] synonym: "pleuroperitoneal channel" RELATED [] relationship: part_of VHOG:0000713 ! diaphragm [Term] id: VHOG:0001506 name: hindgut epithelium relationship: part_of VHOG:0000459 ! hindgut [Term] id: VHOG:0001523 name: aorta is_a: VHOG:0001251 ! artery [Term] id: VHOG:0001524 name: outflow tract endothelium is_a: VHOG:0001217 ! cardiovascular system endothelium relationship: part_of VHOG:0000670 ! outflow tract [Term] id: VHOG:0001526 name: metanephric tubule def: "Any of the renal tubules composing the metanephros." [Bgee:curator "Bgee"] relationship: part_of VHOG:0000719 ! metanephric nephron [Term] id: VHOG:0001527 name: parietal peritoneum xref: TAO:0005131 is_a: VHOG:0001257 ! peritoneum [Term] id: VHOG:0001528 name: visceral peritoneum xref: TAO:0005132 is_a: VHOG:0001257 ! peritoneum [Term] id: VHOG:0001529 name: myoblast def: "An embryonic (precursor) cell of the myogenic lineage that develops from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes." [ZFA:0009025] xref: TAO:0009025 is_a: VHOG:0001533 ! cell [Term] id: VHOG:0001530 name: female germ cell synonym: "female gamete" RELATED [] synonym: "oocyte" RELATED [] synonym: "oogonium" RELATED [] synonym: "ootid" RELATED [] synonym: "ovum" RELATED [] synonym: "unfertilized egg" RELATED [] xref: TAO:0001109 xref: TAO:0001565 xref: TAO:0001566 xref: TAO:0001567 xref: TAO:0001568 xref: TAO:0001569 xref: TAO:0001570 is_a: VHOG:0001534 ! germ cell relationship: part_of VHOG:0001536 ! ovary follicle [Term] id: VHOG:0001531 name: male germ cell synonym: "male gamete" RELATED [] synonym: "sperm" RELATED [] synonym: "spermatid" RELATED [] synonym: "spermatocyte" RELATED [] synonym: "spermatogonia" RELATED [] synonym: "spermatogonium" RELATED [] synonym: "spermatozoa" RELATED [] synonym: "spermatozoon" RELATED [] xref: TAO:0001337 xref: TAO:0009005 xref: TAO:0009006 xref: TAO:0009007 is_a: VHOG:0001534 ! germ cell relationship: part_of VHOG:0000252 ! testis [Term] id: VHOG:0001532 name: ciliated cell xref: TAO:0009032 is_a: VHOG:0001533 ! cell relationship: part_of VHOG:0000077 ! epidermis [Term] id: VHOG:0001533 name: cell def: "Minute protoplasmic masses that make up organized tissue, usually consisting of a nucleus which is surrounded by protoplasm which contains the various organelles and is enclosed in the cell or plasma membrane. Cells are the fundamental, structural, and functional units of living organisms." [ZFA:0009000] xref: CARO:0000013 xref: TAO:0009000 relationship: part_of VHOG:0000671 ! whole organism [Term] id: VHOG:0001534 name: germ cell synonym: "gamete" RELATED [] synonym: "germline cell" RELATED [] xref: TAO:0009156 is_a: VHOG:0001533 ! cell relationship: part_of VHOG:0000397 ! gonad [Term] id: VHOG:0001535 name: lymphocyte def: "A cell of the B cell, T cell, or natural killer cell lineage." [ZFA:0009250] xref: TAO:0009250 is_a: VHOG:0001533 ! cell relationship: part_of VHOG:0001247 ! immune system [Term] id: VHOG:0001536 name: ovary follicle synonym: "ovarian follicle" RELATED [] xref: TAO:0001110 relationship: part_of VHOG:0000251 ! ovary [Term] id: VHOG:0001537 name: epithelium rostral part duodenum relationship: part_of VHOG:0000360 ! duodenum rostral part [Term] id: VHOG:0001539 name: epithelium caudal part duodenum relationship: part_of VHOG:0000361 ! duodenum caudal part [Term] id: VHOG:0001543 name: foramen rotundum def: "A circular hole in the sphenoid bone that connects the middle cranial fossa and the pterygopalatine fossa." [http://en.wikipedia.org/wiki/foramen_rotundum] synonym: "round foramen" RELATED [] is_a: VHOG:0001760 ! foramen relationship: part_of VHOG:0000288 ! chondrocranium [Term] id: VHOG:0001546 name: diaphragm crus synonym: "diaphragm crura" RELATED [] relationship: part_of VHOG:0000713 ! diaphragm [Term] id: VHOG:0001547 name: lamina terminalis relationship: part_of VHOG:0000283 ! telencephalon relationship: part_of VHOG:0000318 ! diencephalon [Term] id: VHOG:0001548 name: spinal cord sulcus limitans relationship: part_of VHOG:0000513 ! lateral wall spinal cord [Term] id: VHOG:0001550 name: larynx cartilage is_a: VHOG:0001207 ! cartilage relationship: part_of VHOG:0001279 ! larynx [Term] id: VHOG:0001552 name: pylorus epithelium relationship: part_of VHOG:0000420 ! pyloric region [Term] id: VHOG:0001553 name: temporal bone petrous part def: "The petrosal bone arises from the two otic bones on the lateral wall of the chondrocranium and encases the inner ear of mammals." [ISBN:978-0030223693 "Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.258"] synonym: "petrosal" RELATED [] relationship: part_of VHOG:0000800 ! temporal bone [Term] id: VHOG:0001557 name: coronary artery is_a: VHOG:0001251 ! artery relationship: part_of VHOG:0000276 ! heart [Term] id: VHOG:0001558 name: anterior commissure xref: TAO:0001108 is_a: VHOG:0001764 ! white matter relationship: part_of VHOG:0000283 ! telencephalon [Term] id: VHOG:0001559 name: caecum synonym: "cecum" RELATED [] relationship: part_of VHOG:0000054 ! large intestine relationship: part_of VHOG:0000459 ! hindgut [Term] id: VHOG:0001561 name: temporal bone squamous part def: "The squamosal bone is part of the dermatocranium in early tetrapods and becomes part of the mammalian occipital and temporal bones." [ISBN:978-0030223693 "Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.246"] synonym: "squamosal" RELATED [] relationship: part_of VHOG:0000800 ! temporal bone [Term] id: VHOG:0001565 name: enameloid def: "A dentine-like hypermineralized substance that covers the tooth tip." [ZFA:0005142 "adapted from"] synonym: "enamel" RELATED [] xref: TAO:0005142 is_a: VHOG:0001726 ! portion of organism substance relationship: part_of VHOG:0001733 ! tooth [Term] id: VHOG:0001566 name: mesovarium def: "The mesentery that suspends the ovary from the dorsal wall of the coelom." [ISBN:978-0072528305 "Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.560"] xref: TAO:0000333 relationship: part_of VHOG:0000251 ! ovary [Term] id: VHOG:0001567 name: spiral organ of Corti relationship: part_of VHOG:0000507 ! cochlear duct [Term] id: VHOG:0001568 name: eye choroid relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0001569 name: metanephric distal convoluted tubule is_a: VHOG:0001526 ! metanephric tubule [Term] id: VHOG:0001570 name: metanephric proximal convoluted tubule is_a: VHOG:0001526 ! metanephric tubule [Term] id: VHOG:0001571 name: outer canthus def: "The angle at the end of the palpebral fissure, the slit between the eyelids, close to the temporal region of the skull." [ISBN:978-0124020603 "Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) adapted from p.263"] synonym: "lateral canthus" RELATED [] synonym: "temporal canthus" RELATED [] relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0001572 name: fovea def: "The fovea is the point at the back of the eyeball where light converges." [ISBN:978-0072528305 "Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.674"] synonym: "fovea centralis" RELATED [] relationship: part_of VHOG:0000229 ! retina [Term] id: VHOG:0001573 name: substantia nigra relationship: part_of VHOG:0000069 ! midbrain [Term] id: VHOG:0001585 name: lateral mamillary nucleus relationship: part_of VHOG:0000318 ! diencephalon [Term] id: VHOG:0001586 name: tuberomamillary nucleus relationship: part_of VHOG:0000179 ! hypothalamus [Term] id: VHOG:0001587 name: medial mamillary nucleus relationship: part_of VHOG:0000318 ! diencephalon [Term] id: VHOG:0001588 name: nucleus gracilis synonym: "gracile nucleus" RELATED [] is_a: VHOG:0001768 ! grey matter relationship: part_of VHOG:0000181 ! medulla oblongata [Term] id: VHOG:0001589 name: dentine def: "Mineralized collagen containing substance that forms the tooth structure." [ZFA:0005143] xref: TAO:0005143 is_a: VHOG:0001726 ! portion of organism substance relationship: part_of VHOG:0001733 ! tooth [Term] id: VHOG:0001590 name: lymph is_a: VHOG:0001726 ! portion of organism substance relationship: part_of VHOG:0000842 ! lymphatic system [Term] id: VHOG:0001591 name: red nucleus synonym: "nucleus ruber" RELATED [] is_a: VHOG:0001768 ! grey matter relationship: part_of VHOG:0000069 ! midbrain [Term] id: VHOG:0001592 name: basal lamina def: "Acellular anatomical structure that consists of a thin sheet of fibrous proteins that underlie and support the cells of an epithelium. It separates the cells of an epithelium from any underlying tissue." [ZFA:0001485] synonym: "basal laminae" RELATED [] synonym: "lamina densa" RELATED [] xref: CARO:0000065 xref: TAO:0001485 is_a: VHOG:0001759 ! anatomical structure [Term] id: VHOG:0001593 name: cuneate nucleus is_a: VHOG:0001768 ! grey matter relationship: part_of VHOG:0000181 ! medulla oblongata [Term] id: VHOG:0001594 name: nucleus ambiguus is_a: VHOG:0001768 ! grey matter relationship: part_of VHOG:0000181 ! medulla oblongata [Term] id: VHOG:0001597 name: cerebellar cortex relationship: part_of VHOG:0000024 ! cerebellum [Term] id: VHOG:0001598 name: cerebellum anterior lobe relationship: part_of VHOG:0001597 ! cerebellar cortex [Term] id: VHOG:0001605 name: claustrum def: "The thin layer of gray matter lateral to the external capsule, separating it from the white matter of the insula." [http://medical-dictionary.thefreedictionary.com/claustrum] relationship: part_of VHOG:0001696 ! basal ganglia [Term] id: VHOG:0001608 name: corpus callosum def: "The largest commissure of the brain connecting the cerebral hemispheres." [http://medical-dictionary.thefreedictionary.com/corpus+callosum] is_a: VHOG:0001764 ! white matter relationship: part_of VHOG:0000283 ! telencephalon [Term] id: VHOG:0001616 name: eye globe relationship: part_of VHOG:0000275 ! eye [Term] id: VHOG:0001621 name: spinal cord lateral column relationship: part_of VHOG:0000601 ! spinal cord [Term] id: VHOG:0001622 name: spinal cord ventral column def: "The ventral ridge of gray matter in each half of the spinal cord." [http://medical-dictionary.thefreedictionary.com/anterior+column+of+spinal+cord "adapted from"] synonym: "spinal cord anterior column" RELATED [] relationship: part_of VHOG:0000601 ! spinal cord [Term] id: VHOG:0001623 name: spinal cord dorsal column def: "The dorsolateral ridge of gray matter in each lateral half of the spinal cord." [http://medical-dictionary.thefreedictionary.com/posterior+column+of+spinal+cord] synonym: "spinal cord posterior column" RELATED [] relationship: part_of VHOG:0000601 ! spinal cord [Term] id: VHOG:0001624 name: hematopoietic system synonym: "haematological system" RELATED [] synonym: "hematological system" RELATED [] xref: TAO:0005023 is_a: VHOG:0001725 ! anatomical system [Term] id: VHOG:0001625 name: olfactory tubercle relationship: part_of VHOG:0000325 ! olfactory cortex [Term] id: VHOG:0001627 name: inferior olive xref: TAO:0000215 is_a: VHOG:0001768 ! grey matter relationship: part_of VHOG:0000181 ! medulla oblongata [Term] id: VHOG:0001634 name: midgut epithelium relationship: part_of VHOG:0000290 ! midgut [Term] id: VHOG:0001638 name: zygomatic bone - infraorbital 3 synonym: "jugal bone - infraorbital 3" RELATED [] xref: TAO:0001408 is_a: VHOG:0001190 ! bone relationship: part_of VHOG:0000288 ! chondrocranium relationship: part_of VHOG:0000315 ! viscerocranium relationship: part_of VHOG:0001665 ! dermatocranium [Term] id: VHOG:0001639 name: cerebral hemisphere synonym: "cerebrum" RELATED [] relationship: part_of VHOG:0000283 ! telencephalon [Term] id: VHOG:0001640 name: podocyte - nephrocyte xref: TAO:0009285 is_a: VHOG:0001533 ! cell relationship: part_of VHOG:0001237 ! pronephric glomerulus [Term] id: VHOG:0001641 name: cardiac mesoderm relationship: part_of VHOG:0000558 ! splanchnopleure [Term] id: VHOG:0001644 name: head xref: TAO:0001114 is_a: VHOG:0001758 ! organism subdivision [Term] id: VHOG:0001665 name: dermatocranium def: "Cranium which consists of dermally derived bones." [XAO:0003169] synonym: "dermal bone cranium" RELATED [] xref: TAO:0000863 is_a: VHOG:0001737 ! anatomical cluster relationship: part_of VHOG:0000334 ! cranium [Term] id: VHOG:0001666 name: appendicular skeleton def: "Skeletal structure that has as its parts the pectoral and pelvic girdles, which articulate with the axial skeleton, together with their associated limbs, the forelimbs and hind limbs." [XAO:0003166] is_a: VHOG:0001254 ! skeletal system [Term] id: VHOG:0001670 name: vertebra neural arch synonym: "vertebra dorsal arch" RELATED [] xref: TAO:0001066 relationship: part_of VHOG:0001143 ! vertebra [Term] id: VHOG:0001671 name: exocoelomic cavity synonym: "chorionic cavity" RELATED [] synonym: "extraembryonic coelomic cavity" RELATED [] is_a: VHOG:0000767 ! extraembryonic cavities [Term] id: VHOG:0001674 name: sensory system def: "A part of the nervous system responsible for processing sensory information." [XAO:0003194] xref: TAO:0000282 is_a: VHOG:0001725 ! anatomical system relationship: part_of VHOG:0000402 ! nervous system [Term] id: VHOG:0001676 name: otolith organ xref: TAO:0000559 is_a: VHOG:0001730 ! cavitated compound organ relationship: part_of VHOG:0000729 ! membranous labyrinth [Term] id: VHOG:0001677 name: dorsal lateral line xref: TAO:0005112 relationship: part_of VHOG:0001243 ! lateral line system [Term] id: VHOG:0001678 name: pigment cell def: "Cell type that contains a deposition of coloring matter." [XAO:0003014 "adapted from"] synonym: "chromatocyte" RELATED [] synonym: "chromatophore" RELATED [] xref: TAO:0009090 xref: TAO:0009170 is_a: VHOG:0001533 ! cell relationship: part_of VHOG:0000860 ! skin [Term] id: VHOG:0001679 name: melanophore def: "A pigment cell derived from the neural crest. Contains melanin-filled pigment granules, which gives a brown to black appearance." [ZFA:0009091] synonym: "melanocyte" RELATED [] xref: TAO:0009091 is_a: VHOG:0001678 ! pigment cell [Term] id: VHOG:0001680 name: periderm def: "The outermost epidermal layer." [ZFA:0001185 "adapted from"] synonym: "epidermis epithelial layer" RELATED [] synonym: "epidermis outer layer" RELATED [] xref: TAO:0001185 is_a: VHOG:0000077 ! epidermis relationship: part_of VHOG:0000153 ! embryonic ectoderm [Term] id: VHOG:0001696 name: basal ganglia synonym: "basal nuclei" RELATED [] relationship: part_of VHOG:0001639 ! cerebral hemisphere [Term] id: VHOG:0001697 name: natural killer cell def: "A natural killer cell is a lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells." [ZFA:0009278] synonym: "large granular lymphocyte" RELATED [] synonym: "NK cell" RELATED [] synonym: "null cell" RELATED [] xref: TAO:0009278 is_a: VHOG:0001535 ! lymphocyte [Term] id: VHOG:0001699 name: fastigial nucleus synonym: "medial cerebellar nucleus" RELATED [] synonym: "nucleus fastigii" RELATED [] relationship: part_of VHOG:0000024 ! cerebellum [Term] id: VHOG:0001700 name: dentate nucleus synonym: "lateral cerebellar nucleus" RELATED [] relationship: part_of VHOG:0000024 ! cerebellum [Term] id: VHOG:0001701 name: nucleus isthmi synonym: "parabigeminal nucleus" RELATED [] xref: TAO:0000398 is_a: VHOG:0001768 ! grey matter relationship: part_of VHOG:0000181 ! medulla oblongata [Term] id: VHOG:0001721 name: material anatomical entity def: "Anatomical entity that has mass." [CARO:0000006] xref: CARO:0000006 is_a: VHOG:0001732 ! vHOG anatomical entity [Term] id: VHOG:0001723 name: compound organ def: "Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types." [CARO:0000024] xref: CARO:0000024 is_a: VHOG:0001759 ! anatomical structure relationship: part_of VHOG:0000671 ! whole organism [Term] id: VHOG:0001724 name: anatomical group def: "Anatomical structure consisting of at least two non-overlapping organs, multi-tissue aggregates or portion of tissues or cells of different types that does not constitute an organism, organ, multi-tissue aggregate, or portion of tissue." [CARO:0000054] xref: CARO:0000054 is_a: VHOG:0001759 ! anatomical structure relationship: part_of VHOG:0000671 ! whole organism [Term] id: VHOG:0001725 name: anatomical system def: "Anatomical group that is has as its parts distinct anatomical structures interconnected by anatomical structures at a lower level of granularity." [CARO:0000011] xref: CARO:0000011 is_a: VHOG:0001724 ! anatomical group [Term] id: VHOG:0001726 name: portion of organism substance def: "Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body." [CARO:0000004] xref: CARO:0000004 is_a: VHOG:0001721 ! material anatomical entity [Term] id: VHOG:0001727 name: immaterial anatomical entity def: "Anatomical entity that has no mass." [CARO:0000007] xref: CARO:0000007 is_a: VHOG:0001732 ! vHOG anatomical entity [Term] id: VHOG:0001728 name: anatomical space def: "Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures." [CARO:0000005] xref: CARO:0000005 is_a: VHOG:0001727 ! immaterial anatomical entity [Term] id: VHOG:0001730 name: cavitated compound organ def: "Compound organ that contains one or more macroscopic anatomical spaces." [CARO:0000072] xref: CARO:0000072 is_a: VHOG:0001723 ! compound organ [Term] id: VHOG:0001732 name: vHOG anatomical entity [Term] id: VHOG:0001733 name: tooth synonym: "dentition" RELATED [] synonym: "teeth" RELATED [] relationship: part_of VHOG:0000188 ! oral cavity relationship: part_of VHOG:0000453 ! lower jaw relationship: part_of VHOG:0000454 ! upper jaw [Term] id: VHOG:0001737 name: anatomical cluster def: "Anatomical group that has its parts adjacent to one another." [CARO:0000041] xref: CARO:0000041 is_a: VHOG:0001724 ! anatomical group [Term] id: VHOG:0001742 name: yolk xref: TAO:0000084 relationship: part_of VHOG:0000745 ! zygote [Term] id: VHOG:0001743 name: vein def: "Any of the tubular branching vessels that carry blood from the capillaries toward the heart." [XAO:0000115] xref: TAO:0000082 is_a: VHOG:0001250 ! blood vessel relationship: part_of VHOG:0000277 ! venous system [Term] id: VHOG:0001750 name: upper lip def: "Lip that covers the lower portion of the mouth." [ZFIN:Curator] xref: TAO:0001970 is_a: VHOG:0000677 ! lip [Term] id: VHOG:0001751 name: rectum def: "The terminal portion of the large intestine between the ileo-pelvic colon and the anus." [ISBN:978-0828893114] relationship: part_of VHOG:0000054 ! large intestine relationship: part_of VHOG:0000459 ! hindgut [Term] id: VHOG:0001753 name: forelimb - pectoral fin def: "One of the pair of limbs that are situated anteriorly." [XAO:0003030] xref: TAO:0001161 is_a: VHOG:0000336 ! limb [Term] id: VHOG:0001754 name: forelimb - pectoral fin bud xref: TAO:0000141 is_a: VHOG:0001258 ! limb - fin bud [Term] id: VHOG:0001756 name: ventricular system choroid fissure xref: TAO:0001075 relationship: part_of VHOG:0000283 ! telencephalon [Term] id: VHOG:0001757 name: portion of tissue def: "Anatomical structure, that consists of similar cells and intercellular matrix, aggregated according to genetically determined spatial relationships." [CARO:0000043] xref: CARO:0000043 is_a: VHOG:0001759 ! anatomical structure [Term] id: VHOG:0001758 name: organism subdivision def: "Anatomical structure which is a primary subdivision of whole organism. The mereological sum of these is the whole organism." [CARO:0000032] xref: CARO:0000032 is_a: VHOG:0001759 ! anatomical structure relationship: part_of VHOG:0000671 ! whole organism [Term] id: VHOG:0001759 name: anatomical structure def: "Material anatomical entity that has inherent 3D shape and is generated by coordinated expression of the organism's own genome." [CARO:0000003] xref: CARO:0000003 is_a: VHOG:0001721 ! material anatomical entity [Term] id: VHOG:0001760 name: foramen def: "Anatomical space that is an opening in a bone, usually for passage of blood vessels or nerves." [TAO:0001736] is_a: VHOG:0001728 ! anatomical space [Term] id: VHOG:0001762 name: multi-tissue structure def: "Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types." [CARO:0000055] synonym: "multi-tissue structures" RELATED [] xref: CARO:0000055 is_a: VHOG:0001759 ! anatomical structure [Term] id: VHOG:0001763 name: arteriole def: "Multi-tissue structure part of the blood vasculature, feeds into capillaries. Arterioles carry blood away from the heart." [TAO:0002138] xref: TAO:0002138 is_a: VHOG:0001250 ! blood vessel relationship: part_of VHOG:0000273 ! arterial system [Term] id: VHOG:0001764 name: white matter def: "Multi-tissue structure comprised largely of myelinated axons." [ZFA:0001682] synonym: "white mater" RELATED [] xref: TAO:0000145 xref: TAO:0002142 xref: TAO:0002143 is_a: VHOG:0001762 ! multi-tissue structure relationship: part_of VHOG:0000293 ! central nervous system [Term] id: VHOG:0001765 name: venule def: "Multi-tissue structure part of the blood vasculature formed by the anastomosis of capillaries. Venules carry blood toward the heart." [ZFA:0005315] xref: TAO:0005315 is_a: VHOG:0001250 ! blood vessel relationship: part_of VHOG:0000277 ! venous system [Term] id: VHOG:0001766 name: embryo is_a: VHOG:0001759 ! anatomical structure [Term] id: VHOG:0001768 name: grey matter def: "Multi-tissue comprised of neurons, dendrites, axon terminals, glial cells, and capillaries." [ZFA:0001681] synonym: "gray mater" RELATED [] synonym: "gray matter" RELATED [] xref: TAO:0002197 is_a: VHOG:0001762 ! multi-tissue structure relationship: part_of VHOG:0000293 ! central nervous system [Term] id: VHOG:0001770 name: lateral - ventral habenular nucleus xref: TAO:0000302 relationship: part_of VHOG:0000178 ! epithalamus [Term] id: VHOG:0001777 name: stomodeum def: "The anterior part of the embryonic digestive system deriving from the stomodeal invagination of the ectoderm." [FBbt:00000439] synonym: "mouth primordium" RELATED [] synonym: "stomatodaeum" RELATED [] xref: TAO:0001290 is_a: VHOG:0000280 ! oral region [Typedef] id: part_of name: part of is_transitive: true