VIVO-ISF Ontology version 1.6
editor preferred term
example of usage
has curation status
definition
editor note
term editor
alternative term
definition source
curator note
imported from
is defined by
deprecated property
United Nations cartographic maps
http://www.un.org/Depts/Cartographic/map/profile/world00.pdf
2010-05-01
United Nations cartographic maps http://www.un.org/Depts/Cartographic/map/profile/world00.pdf
has border with
has member country or territory
United Nations cartographic maps
http://www.un.org/Depts/Cartographic/map/profile/world00.pdf
2010-05-01
United Nations cartographic maps http://www.un.org/Depts/Cartographic/map/profile/world00.pdf
is administered by
in geographic grouping
United Nations Statistics Division
http://unstats.un.org/unsd/methods/m49/m49chang.htm
http://unstats.un.org/unsd/methods/m49/m49chgef.htm
2010-04-15
United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49chang.htm
is predecessor of
United Nations Statistics Division
http://unstats.un.org/unsd/methods/m49/m49chang.htm
http://unstats.un.org/unsd/methods/m49/m49chgef.htm
2010-04-15
United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49chang.htm
is successor of
has contact info
contact info for
context for
has context
has contact agent
part of
has part
realized-in
realizedIn
[copied from inverse property 'realizes'] to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003])
if a realizable entity b is realized in a process p, then p stands in the has_participant relation to the bearer of b. (axiom label in BFO2 Reference: [106-002])
(forall (x y z t) (if (and (RealizableEntity x) (Process y) (realizesAt y x t) (bearerOfAt z x t)) (hasParticipantAt y z t))) // axiom label in BFO2 CLIF: [106-002]
realized in
realizes
realizes
to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003])
(forall (x y t) (if (realizesAt x y t) (and (Process x) (or (Disposition y) (Role y)) (exists (z) (and (MaterialEntity z) (hasParticipantAt x z t) (bearerOfAt z y t)))))) // axiom label in BFO2 CLIF: [059-003]
realizes
An access service that provides access to a flow cytometer.
Instruments, reagents, organisms, or software for which the service provides access.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
change the domain tye to access service
provides access to
uses
Microsoft powerpoint is commonly used in research laboratories to prepare presentations.
Software or protocol used by the laboratory.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
Here there are things to be fixed (for instance a service can use a technique...)
uses
has expertise
Brian Druker has expertise in cancer research.
Technique in which the person is proficient.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
has expertise in technique
has manufacturer
Santa Cruz Biotechnology is the manufacturer of many antibodies.
Organization or person that created the resource.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
manufacturer
provides services
A core lab providing cell sorting to individual labs.
Service offered by the organization.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
contact or provider for service
specifies the use of
A protocol can specify the use of a flow cytometer.
Instruments, techniques, reagents, organisms, or software that are referenced in a protocol.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
specifies the use of
used by
A laboratory uses Microsoft Word.
Laboratory that uses the protocol or software.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
used by
service provided by
A core laboratory provides a service.
Organization or laboratory performing the service.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
service provided by
A cancer researcher performs apoptosis assays.
Technique carried out by the person or laboratory.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
performs technique
is performed by
Confocal microscopy is performed by a confocal core laboratory.
Person or laboratory that performs the service or technique.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
is performed by
has documentation
An antibody has documentation describing attributes of the antibody.
Document that contains relevant resource information.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
has documentation
realizes protocol
A sequencing protocol used for next generation sequencing.
Protocol used to perform the service.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
placeholder: need to be modeled for the proper kind of service (production services)
realizes protocol
related technique
Flow cytometry is a related technique for a flow cytometer instrument.
Method in which the resource can be used.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
related technique
used to study
A study of hibernation in bears.
Biological process studied in the organism.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
used to study
has residency requirement
A research opportunity requires applicants to be US citizens.
US residency status of applicants that may apply for the student research opportunity.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
has residency requirement
related research project
A research project studying breast cancer.
Research project during which the biological specimen was collected.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
related research project
related biological specimen
A breast cancer specimen.
Biological specimen collected as part of the research project.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
related biological specimen
has phase
Phase 1 clinical trial.
Phase of a clinical trial to evaluate risk and to clinically evaluate the efficacy of drugs or biologicals.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
has phase
performs human study
The Jackson Heart Institute performs human studies on heart disease.
Human study performed by the organization.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
performs human study
human study performed by
Jackson State University performs human studies on heart disease.
Organization that performs the human study.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
performed by organization
has measurement unit label
mentions
m is a quality measurement of q at t when
q is a quality
there is a measurement process p that has specified output m, a measurement datum, that is about q
8/6/2009 Alan Ruttenberg: The strategy is to be rather specific with this relationship. There are other kinds of measurements that are not of qualities, such as those that measure time. We will add these as separate properties for the moment and see about generalizing later
From the second IAO workshop [Alan Ruttenberg 8/6/2009: not completely current, though bringing in comparison is probably important]
This one is the one we are struggling with at the moment. The issue is what a measurement measures. On the one hand saying that it measures the quality would include it "measuring" the bearer = referring to the bearer in the measurement. However this makes comparisons of two different things not possible. On the other hand not having it inhere in the bearer, on the face of it, breaks the audit trail.
Werner suggests a solution based on "Magnitudes" a proposal for which we are awaiting details.
--
From the second IAO workshop, various comments, [commented on by Alan Ruttenberg 8/6/2009]
unit of measure is a quality, e.g. the length of a ruler.
[We decided to hedge on what units of measure are, instead talking about measurement unit labels, which are the information content entities that are about whatever measurement units are. For IAO we need that information entity in any case. See the term measurement unit label]
[Some struggling with the various subflavors of is_about. We subsequently removed the relation represents, and describes until and only when we have a better theory]
a represents b means either a denotes b or a describes
describe:
a describes b means a is about b and a allows an inference of at least one quality of b
We have had a long discussion about denotes versus describes.
From the second IAO workshop: An attempt at tieing the quality to the measurement datum more carefully.
a is a magnitude means a is a determinate quality particular inhering in some bearer b existing at a time t that can be represented/denoted by an information content entity e that has parts denoting a unit of measure, a number, and b. The unit of measure is an instance of the determinable quality.
From the second meeting on IAO:
An attempt at defining assay using Barry's "reliability" wording
assay:
process and has_input some material entity
and has_output some information content entity
and which is such that instances of this process type reliably generate
outputs that describes the input.
This one is the one we are struggling with at the moment. The issue is what a measurement measures. On the one hand saying that it measures the quality would include it "measuring" the bearer = referring to the bearer in the measurement. However this makes comparisons of two different things not possible. On the other hand not having it inhere in the bearer, on the face of it, breaks the audit trail.
Werner suggests a solution based on "Magnitudes" a proposal for which we are awaiting details.
Alan Ruttenberg
is quality measurement of
inverse of the relation of is quality measurement of
2009/10/19 Alan Ruttenberg. Named 'junk' relation useful in restrictions, but not a real instance relationship
Person:Alan Ruttenberg
is quality measured as
has_specified_input
see is_input_of example_of_usage
A relation between a planned process and a continuant participating in that process that is not created during the process. The presence of the continuant during the process is explicitly specified in the plan specification which the process realizes the concretization of.
8/17/09: specified inputs of one process are not necessarily specified inputs of a larger process that it is part of. This is in contrast to how 'has participant' works.
PERSON: Alan Ruttenberg
PERSON: Bjoern Peters
PERSON: Larry Hunter
PERSON: Melanie Coutot
has specified input
has_specified_output
A relation between a planned process and a continuant participating in that process. The presence of the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of.
PERSON: Alan Ruttenberg
PERSON: Bjoern Peters
PERSON: Larry Hunter
PERSON: Melanie Courtot
has specified output
is_manufactured_by
http://www.affymetrix.com/products/arrays/specific/hgu133.affx is_manufactered_by http://www.affymetrix.com/ (if we decide to use these URIs for the actual entities)
c is_manufactured_by o means that there was a process p in which c was built in which a person, or set of people or machines did the work(bore the "Manufacturer Role", and those people/and or machines were members or of directed by the organization to do this.
Alan Ruttenberg
Liju Fan
has_make
has_manufacturer
manufactured by
is_specified_output_of
A relation between a planned process and a continuant participating in that process. The presence of the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of.
Alan Ruttenberg
PERSON:Bjoern Peters
is specified output of
A cell sorting process achieves the objective specification 'material separation objective'
This relation obtains between a planned process and a objective specification when the criteria specified in the objective specification are met at the end of the planned process.
BP, AR, PPPB branch
PPPB branch derived
modified according to email thread from 1/23/09 in accordince with DT and PPPB branch
achieves planned objective
has grain
the relation of the cells in the finger of the skin to the finger, in which an indeterminate number of grains are parts of the whole by virtue of being grains in a collective that is part of the whole, and in which removing one granular part does not nec- essarily damage or diminish the whole. Ontological Whether there is a fixed, or nearly fixed number of parts - e.g. fingers of the hand, chambers of the heart, or wheels of a car - such that there can be a notion of a single one being missing, or whether, by contrast, the number of parts is indeterminate - e.g., cells in the skin of the hand, red cells in blood, or rubber molecules in the tread of the tire of the wheel of the car.
Discussion in Karslruhe with, among others, Alan Rector, Stefan Schulz, Marijke Keet, Melanie Courtot, and Alan Ruttenberg. Definition take from the definition of granular parthood in the cited paper. Needs work to put into standard form
PERSON: Alan Ruttenberg
PAPER: Granularity, scale and collectivity: When size does and does not matter, Alan Rector, Jeremy Rogers, Thomas Bittner, Journal of Biomedical Informatics 39 (2006) 333-349
has grain
This relation obtains between a a objective specification and a planned process when the criteria specified in the objective specification are met at the end of the planned process.
definition needs clean up to indicate directionality
objective achieved by
This clarifies that only specifically dependent continuants inhere in (specifically) one independent continuant over all time. For GDCs, there in implicitly inherence to all the independent continuants in which the concretizations inhere. Should add a 'cardinality 1' restriction to the definition of specifically dependent continuant.
This relation belongs in BFO/RO, and will be in BFO 2
inheres in
bearer of
participates in
has participant
location of
contained in
contains
located in
adjacent to
has input
has output
member of
has member
output of
a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix.
Melissa Haendel
produces
produced by
contributor
The public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
A legal decision that affirms a ruling.
http://purl.org/ontology/bibo/
affirmed by
The public description source is: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html.
Critical or explanatory note for a Document.
http://purl.org/ontology/bibo/
annotates
stable
cited by
cites
Public description take from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this property "unstable".
A court associated with a legal document; for example, that which issues a decision.
http://purl.org/ontology/bibo/
Court
unstable
The source of the public description and this info is found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this term "unstable". The bibo editorial note is: "We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen."
The thesis degree.
http://purl.org/ontology/bibo/
related degree
unstable
We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen.
Definition take from this site: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html .
A Film director.
http://purl.org/ontology/bibo/
director
stable
Public Description for bibo:distributor taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html .
distributor
An agent that is interviewed by another agent.
http://purl.org/ontology/bibo/
interviewee
stable
An agent that interview another agent.
http://purl.org/ontology/bibo/
interviewer
stable
An entity responsible for issuing often informally published documents such as press releases, reports, etc. This term is classified as unstable by bibo.
An entity responsible for issuing often informally published documents such as press releases, reports, etc.
http://purl.org/ontology/bibo/
issuer
unstable
http://purl.org/ontology/bibo/
performer
stable
Public Description from source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers the bibo:presents and the bibo:presentedAt unstable terms. It also indicates that bibo:presents is a sub-property of event:product.
Relates a document to an event; for example, a paper to a conference.
http://purl.org/ontology/bibo/
presented at event
unstable
Public Description from source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers the bibo:presents and the bibo:presentedAt unstable terms. It also indicates that bibo:presents is a sub-property of event:product.
Relates an event to associated documents; for example, conference to a paper.
http://purl.org/ontology/bibo/
related documents
unstable
An agent that receives a communication document.
http://purl.org/ontology/bibo/
recipient
stable
reproduced in
The first sentence of the public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
A legal decision that reverses a ruling.
http://purl.org/ontology/bibo/
reversed by
The bibo:reviewOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . As of 26 May 2010, bibo:reviewOf is used with the class Review, but core:reviewIn doesn't seem to be being used.
review of
paraphrased editorial note from the bibo ontology: We are not defining, using an enumeration, the range of the bibo:status to be a defined list of bibo:DocumentStatus. This is because we want people to be able to define new statuses if needed; and creating such an enumeration would prevent this.
status
Public description is from comments of this object property in bibo ontology located here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
A legal decision on appeal that takes action on a case (affirming it, reversing it, etc.).
http://purl.org/ontology/bibo/
subsequent legal decision
The bibo:transcriptOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers this term unstable.
Relates a document to some transcribed original.
http://purl.org/ontology/bibo/
transcript of
unstable
Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html .
Relates a translated document to the original document.
http://purl.org/ontology/bibo/
translation of
stable
translator
A property linking a publication entity to an instance of c40:GlobalCitationCount that specifies how many times a work has been cited by others, according to a particular information source on a particular date.
A property linking a publication entity to the property c40:GlobalCitationCount that specify how many times a work has been cited by others, according to a particular information source on a particular date.
has global citation frequency
The date on which the global citation count of the cited entity was recorded from a named bibliographic information source.
has global count date
A property linking an instance of c40:GlobalCitationCount to the bibliographic information source providing the global citation count information for a particular publication on a particular date.
A property linking the property c40:GlobalCitationCount to the bibliographic information source providing the global citation count information for a particular publication on a particular date.
has global count source
The citing entity cites the cited entity as source of data.
cites as data source
cites as data source
The cited entity is cited as a data source by the citing entity.
is cited as data source by
is cited as data source by
has affiliated organization
Relates a Relationship (as a predicate or n-ary relation over one or more Thing) to an Agent that defined or instantiated the predicate instance.
assigned by
assignee
assignee for patent
assigns
concept for
contributor
date filed
date issued
date/time
date/time interval
date/time precision
date/time value
degree candidacy
Public Description for bibo:distributor taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html .
distributes
For example, National Science Foundation providesFundingThrough Graduate Research Fellowship Program; National Institutes of Health providesFundingThrough National Center for Research Resources.
distributes funding from
credential eligibility attained
end
equipment for
equipment for
expiration date
This is done through a restriction on the foaf:Person class.
featured in
This is done through a restriction on the foaf:Person class.
features
provides funding for
geographic focus
geographic focus of
governing authority for
subcontracted through
associated concept
has collaborator
has equipment
has facility
funding provided via
governing authority
predecessor organization
has prerequisite
A possible working example: The conference proceeding of the SPIE was generated from the conference - International Society for Optical Engineering.
proceedings
published in
research areas
has subject area
successor organization
Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html .
has translation
an information resource (typically a publication) supported by (typically via funding) an agreement (such as a grant)
supported by
offered by
offers
This is now an object property where the object value is a resource of the form <http://orcid.org/NNNN-NNNN-NNNN-NNNN>. This is to support connecting VIVO and ORCID in the linked data web. Note: a person can have multiple ORCID iDs.
ORCID iD
prerequisite for
A possible working example: The conference proceeding of the SPIE was generated from the conference - International Society for Optical Engineering.
proceedings of
For example, National Science Foundation providesFundingThrough Graduate Research Fellowship Program; National Institutes of Health providesFundingThrough National Center for Research Resources.
provides funding through
publication venue for
Public Definition source (http://www.answers.com/topic/publisher).
publisher
Public Definition source (http://www.answers.com/topic/publisher).
publisher of
Relates a Thing to a Relationship as a Thing that is somehow related to other Thing in the same Relationship instance. A Relationship instnace is a predicate over Thing and is created by an Agent.
related by
Relates a Relationship instance to the one or more Thing of the Relationship. There is a separate property (assigned by) to relate to the Agent that defines the Relationship.
relates
reproduces
research area of
The bibo:reviewOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . As of 26 May 2010, bibo:reviewOf is used with the class Review, but core:reviewIn doesn't seem to be being used.
reviewed in
contributes to
award sponsored by
sponsors award or honor
start
subcontracts grant
subject area of
general relationship of support
supported by
an information resource (typically a publication) supported by (typically via funding) an agreement (such as a grant)
supported publications or other works
general relationship of support
supports
translator of
valid in
access provided by
documentation for project or resource
protocol realized by
implements
is encoded in
has agent
Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy .
Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy .
broader concept
Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy .
Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy .
narrower concept
related concept
has address
has calendar link
has calendar request
has calendar busy
has category
has email
has formatted name
has geo
has messaging
has key
has language
has logo
To include a member in the group this vCard represents
member
has name
has nickname
has note
has organization name
has organizational unit name
has photo
has related
has sound
has telephone
has time zone
has title
has URL
World Bank
http://data.albankaldawli.org/indicator/NY.GDP.MKTP.CD
http://data.worldbank.org/indicator/NY.GDP.MKTP.CD
http://data.worldbank.org/indicator/NY.GDP.MKTP.CD
http://donnees.banquemondiale.org/indicateur/NY.GDP.MKTP.CD
ttp://datos.bancomundial.org/indicador/NY.GDP.MKTP.CD
2010-12-16
GDP at purchaser's prices is the sum of gross value added by all resident producers in the economy plus any product taxes and minus any subsidies not included in the value of the products. It is calculated without making deductions for depreciation of fabricated assets or for depletion and degradation of natural resources. Data are in current U.S. dollars. Dollar figures for GDP are converted from domestic currencies using single year official exchange rates. For a few countries where the official exchange rate does not reflect the rate effectively applied to actual foreign exchange transactions, an alternative conversion factor is used. Source: World Bank national accounts data, and OECD National Accounts data files. http://data.worldbank.org/indicator/NY.GDP.MKTP.CD
World Bank http://data.worldbank.org/indicator/NY.GDP.MKTP.CD
GDP
GDP notes
GDP total in current prices
GDP unit
GDPYear
UNDP - HDRO
http://hdrstats.undp.org/en/indicators/49806.html
http://hdrstats.undp.org/en/indicators/49806.html
http://hdrstats.undp.org/es/indicadores/49806.html
http://hdrstats.undp.org/fr/indicateurs/49806.html
2010-11-04
composite index measuring average achievement in three basic dimensions of human development-a long and healthy life, knowledge and a decent standard of living. Source: Calculated based on data from UNDESA (2009d), Barro and Lee (2010), UNESCO Institute for Statistics (2010b), World Bank (2010b) and IMF(2010a) . http://hdrstats.undp.org/en/indicators/49806.html
composite index measuring average achievement in three basic dimensions of human development—a long and healthy life, knowledge and a decent standard of living. Source: Calculated based on data from UNDESA (2009d), Barro and Lee (2010), UNESCO Institute for Statistics (2010b), World Bank (2010b) and IMF(2010a) . http://hdrstats.undp.org/en/indicators/49806.html
UNDP - HDRO http://hdrstats.undp.org/en/indicators/49806.html
FAOSTAT
http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor
http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor
2010-07-21
Agricultural area, this category is the sum of areas under a) arable land - land under temporary agricultural crops (multiple-cropped areas are counted only once), temporary meadows for mowing or pasture, land under market and kitchen gardens and land temporarily fallow (less than five years). The abandoned land resulting from shifting cultivation is not included in this category. Data for “Arable land” are not meant to indicate the amount of land that is potentially cultivable; (b) permanent crops - land cultivated with long-term crops which do not have to be replanted for several years (such as cocoa and coffee); land under trees and shrubs producing flowers, such as roses and jasmine; and nurseries (except those for forest trees, which should be classified under "forest"); and (c) permanent meadows and pastures - land used permanently (five years or more) to grow herbaceous forage crops, either cultivated or growing wild (wild prairie or grazing land). Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx
FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
agricultural area
agricultural area notes
agriculturalAreaTotal
agricultural area unit
agriculturalAreaYear
AGROVOC
http://aims.fao.org/ar/website/Search-AGROVOC/sub
http://aims.fao.org/es/website/Search-AGROVOC/sub
http://aims.fao.org/fr/website/Search-AGROVOC/sub
http://aims.fao.org/website/Search-AGROVOC/sub
http://aims.fao.org/zh-hans/website/Search-AGROVOC/sub
AGROVOC http://aims.fao.org/website/Search-AGROVOC/sub
codeAGROVOC
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
codeCurrency
DBpedia
http://dbpedia.org/About
2010-04-28
DBpedia http://dbpedia.org/About
codeDBPediaID
FAOSTAT
http://faostat.fao.org
http://faostat.fao.org/default.aspx?lang=es
http://faostat.fao.org/default.aspx?lang=fr
FAOSTAT http://faostat.fao.org
codeFAOSTAT
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
codeFAOTERM
Global Administrative Unit Layers
http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691
2008-12-10
Global Administrative Unit Layers http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691
codeGAUL
ISO 3166-1
http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm
ISO 3166-1 http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm
codeISO2
United Nations Statistics Division
http://unstats.un.org/unsd/methods/m49/m49alpha.htm
http://unstats.un.org/unsd/methods/m49/m49alphaf.htm
2010-04-01
United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm
codeISO3
United Nations Statistics Division
http://unstats.un.org/unsd/methods/m49/m49alpha.htm
http://unstats.un.org/unsd/methods/m49/m49alphaf.htm
2010-04-01
United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm
codeUN
codeUNDP
FAOSTAT
http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor
http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor
2011-07-21
Country area, area of the country including area under inland water bodies, but excluding offshore territorial waters. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx
FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
countryArea
country area notes
total country area
country area unit
countryAreaYear
has code
has coordinate
has currency
has list name
has maximum latitude
has maximum longitude
has minimum latitude
has minimum longitude
has nationality
has official name
has short name
has statistics
FAOSTAT
http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor
http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor
2011-07-21
Land area is the total area of the country excluding area under inland water bodies. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. Data are expressed in 1 000 hectares. http://faostat.fao.org/site/375/default.aspx
FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
land area
land area notes
total land area
land area unit
landAreaYear
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameCurrencyAR
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameCurrencyEN
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameCurrencyES
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameCurrencyFR
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameCurrencyIT
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameCurrencyRU
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameCurrencyZH
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameListAR
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameListEN
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameListES
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameListFR
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameListIT
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameListRU
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameListZH
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameOfficialAR
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameOfficialEN
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameOfficialES
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameOfficialFR
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameOfficialIT
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameOfficialRU
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameOfficialZH
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameShortAR
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameShortEN
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameShortES
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameShortFR
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameShortIT
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameShortRU
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nameShortZH
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nationalityAR
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nationalityEN
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nationalityES
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nationalityFR
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nationalityIT
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nationalityRU
FAO terminology
http://www.fao.org/termportal/contr/ar/
http://www.fao.org/termportal/contr/en/
http://www.fao.org/termportal/contr/es/
http://www.fao.org/termportal/contr/fr/
http://www.fao.org/termportal/contr/zh/
http://www.fao.org/termportal/en/
2010-06-24
FAO terminology http://www.fao.org/termportal/en/
nationalityZH
FAOSTAT
http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor
http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor
http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=es#ancor
http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=fr#ancor
2009-09-21
The total population usually refers to the present-in-area (de facto) population which includes all persons physically present within the present geographical boundaries of countries at the mid-point of the reference period. http://faostat.fao.org/site/375/default.aspx
FAOSTAT http://faostat.fao.org/site/550/default.aspx
population
population notes
total population
population unit
populationYear
The value of the datatype property *validSince* associated to a particular area (territory or group) indicates the area's first year of validity. The geopolitical ontology traces back historic changes only until 1985, therefore, if an area has a validSince = 1985, this indicates that the area is/was valid since 1985 or before.
valid since
The value of the datatype property *validUntil* associated to a particular area (territory or group) indicates the area's last year of validity. In case the area is currently valid, this value is set by default to 9999.
valid until
The document can be used as a template for the creation of other documents.
is template
A free text field for recording topics which relate to the resource.
user-defined tag
patient ID
health care provider ID
Measurement Label
has inventory number
An example inventory number can be in the form: 12345
Inventory identifier for the resource.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
inventory number
has restriction
Resource is only available to researchers in the department.
A restriction on service availability, such as university or consortium affiliation, geographical location, professional certification, or other factors.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
has restriction
has geographic restriction
Resource is only available to researchers in Boston area.
Any service limitation tied to geographically-defined areas such as metro areas, counties, states, or regions.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
has geographic restriction
model number
ABI 9000
Instrument model number, which may be a name, number, or both.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
model number
lab data format
Excel spreadsheet
Current method or software used to inventory a lab's resources. Examples include Excel, index cards, FileMaker, 3-ring binder, etc.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
lab data format
v 1.0
Software edition, typically a numeral followed by a decimal and another numeral, such as 2.1.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
version
study population
African american study population.
Characteristics of the human population being studied. May include number, demographic or geographic information, inclusion or exclusion criteria, or other descriptive information.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
has study population
has eligibility requirement
A grade point average above 3.5 is an eligibility requirement.
Requirements for research opportunity eligibility. Requirements include: coursework, minimum gradepoint average, state residency, under-represented group status, field of study, or matriculation status.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
has eligibility requirement
http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
A summary of the resource.
http://purl.org/dc/terms/
abstract
stable
020530902X
Amazon standard identification number. Source: http://en.wikipedia.org/wiki/Amazon_Standard_Identification_Number.
Amazon Standard Identification Number
http://purl.org/ontology/bibo/
Amazon Standard Identification Number (ASIN)
stable
An chapter number
http://purl.org/ontology/bibo/
chapter number
unstable
CODEN became particularly common in the scientific community as a citation system for periodicals cited in technical- as well in chemistry-related publications and as a search tool in many bibliographic catalogues.
Definition and description came from Wikipedia here: http://en.wikipedia.org/wiki/CODEN
An identifier of serials, still in use by libraries, but replaced by ISSN for any new work
http://purl.org/ontology/bibo/
coden
stable
Digital Object Identifier
http://purl.org/ontology/bibo/
Digital Object Identifier (DOI)
stable
Definition source: http://en.wikipedia.org/wiki/European_Article_Numbering-Uniform_Code_Council.
The Uniform Code Council (UCC) was the Numbering Organization in the USA to administer and manage the EAN.UCC System. In 2005 the UCC changed its name to GS1 US.
European Article Number/Uniform Commercier Code 13
http://purl.org/ontology/bibo/
EAN International-Uniform Code Council (EAN-UCC) 13
stable
The name defining a special edition of a document. Normally its a literal value composed of a version number and words.
http://purl.org/ontology/bibo/
edition
stable
eissn stands for Electronic International Standard Serial Number. source: http://www.definition-of.com/EISSN
The electronic ISSN number of a periodical.
http://purl.org/ontology/bibo/
Electronic International Standard Serial Number (EISSN)
stable
http://en.wikipedia.org/wiki/Global_Trade_Item_Number.
Global Trade Item Number 14
http://purl.org/ontology/bibo/
Global Trade Item Number (GTIN-14)
stable
identifier
http://en.wikipedia.org/wiki/Isbn.
International Standard Book Number (ISBN) 10
source: http://en.wikipedia.org/wiki/Isbn.
International Standard Book Number (ISBN) 13
source: http://en.wikipedia.org/wiki/Issn
International Standard Serial Number
http://purl.org/ontology/bibo/
International Standard Serial Number (ISSN)
stable
Bibo has the domain of bibo:issue as the class Issue, but an example on their site uses it with Article, referring to the issue number "4"
issue
Source: http://en.wikipedia.org/wiki/Library_of_Congress_Control_Number.
Library of Congress Control Number
http://purl.org/ontology/bibo/
Library of Congress Control Number (LCCN)
stable
definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
A description (often numeric) that locates an item within a containing document or collection.
http://purl.org/ontology/bibo/
locator
stable
number of pages
Definition from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
number
http://info-uri.info/registry/OAIHandler?verb=GetRecord&metadataPrefix=reg&identifier=info:oclcnum/.
bibo has the domain of this property set to the union of Collection and Document.
OCLC Identifier
http://purl.org/ontology/bibo/
Online Computer Library Center (OCLC) number
stable
Ending page number within a continuous page range.
http://purl.org/ontology/bibo/
end page
stable
Starting page number within a continuous page range.
http://purl.org/ontology/bibo/
start page
stable
The PubMed ID (PMID) identifies a citation record (rather than full-text) in the PubMed database. It is not evidence of compliance with the NIH Public Access Policy, because it does not identify a full-text submission of any kind.
PubMed Identifier
http://purl.org/ontology/bibo/
PubMed ID
stable
Mr; Ms; Mrs
http://dictionary.reference.com/browse/prefix
The prefix of a name
http://purl.org/ontology/bibo/
name prefix
stable
Di Rado, Alicia. 1995. Trekking through college: Classes explore
modern society using the world of Star trek. Los Angeles Times, March
15, sec. A, p. 3.
An section number
http://purl.org/ontology/bibo/
section
unstable
A short description of the resource.
http://purl.org/ontology/bibo/
short description
unstable
The idea here is that while dcterms:description may involve length descriptions, this for short (two or three word) descriptions that could go in a bibliographic entry.
A sub property of identifier (http://en.wikipedia.org/wiki/SICI).
Serial Item and Contribution Identifier
http://purl.org/ontology/bibo/
Serial Item and Contribution Identifier (SICI)
stable
source for public description: http://en.wikipedia.org/wiki/Universal_Product_Code.
Universal Product Code
http://purl.org/ontology/bibo/
Universal Product Code (UPC)
stable
Definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
URI
volume
An integer defining the value of the global citation count of a cited entity recorded from a named bibliographic information source on a particular date.
An integer defining the value of the global citation count of a cited entity recorded from a named bibliographic information source on a particular date.
has global count value
preferred namespace URI
A short form for an longer title or name.
B.A.
abbreviation
published US Classification Class/subclass (CCL) code
contact information
credits
Not intended to be an institution name.
department or school name within institution
eRA Commons ID
entry term
conservation
use one freetextKeyword assertion for each keyword or phrase.
one keyword or phrase per freetextKeyword assertion
keywords
direct costs
has monetary amount
has value
hide from display
Definition http://en.wikipedia.org/wiki/Job_title#Job_title.
administrative secretary
HR job title
The International classification(s) to which the published application has been assigned.
International Classification (ICL) code
identifier
True; False
Is this person a corresponding author?
license number
core:localAwardId has a domain of core:Grant, and should be public since that's its public identifier for local use by OSP, accounting, department admins, and the PI
local award ID
Information Science; Computer Science; Anthropology
major field of degree
middle name or initial
NIH Manuscript Submission System ID
My extension program consists of developing and reporting disease management strategies that are both economically and environmentally sound for fresh market vegetable production. We hope that some of this testing will result in practices adaptable for organic production.
Used for a single narrative summary of outreach, typically covering a wide range of activities and time periods; use Outreach Provider Role for information on individual activities
outreach overview
overview
source of definition: http://www.uspto.gov/main/glossary/#p . The following site has patent number formats: http://www.uspto.gov/patents/ebc/kindcodesum.jsp .
patent number
place of publication
A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available in PubMed Central. The PMCID is issued shortly after the PI or author approves the PubMed Central formatted web version of the submission.
PubMed Central ID
preferred display order
this number indicates a position in a list
rank
report identifier
Used for a single narrative summary of research, typically covering a wide range of activities and time periods; use Researcher Role for information on individual activities
research overview
RearcherID is a Thomson Reuters project where researchers have a place to manage and share their professional information. It will allow them to solve author identity issues while simultaneously adding dynamic citation metrics and collaboration networks to your personal profile.
Definition source: http://isiwebofknowledge.com/researcherid/
ISI Researcher ID
Home page for Scopus: http://www.scopus.com/home.url
Scopus ID
55
definition modified from: source (http://en.wikipedia.org/wiki/Seating_capacity).
seating capacity
Has a domain of Grant. There is not a strong reason have this be publically visible, since most users would care more about the name of the sponsoring agency than its identifier, but it does no harm to be public.
See also core:localAwardId.
sponsor award ID
supplemental information
Used for a single narrative summary of teaching, typically covering a wide range of courses including for credit and non-credit teaching over multiple semesters; the "teaches" property links a person directly with an instance of a Semester Class, typically from an institutional database of record; then use Teacher Role for information about a person's role in non-credit teaching or their specific contribution to individual courses
teaching overview
term label
term type
total award amount
Every clinical trial in the United States must be approved and monitored by an Institutional Review Board (IRB). An IRB is an independent committee of physicians, statisticians, community advocates and others whose objective is to ensure that a clinical trial is ethical and the rights of study participants are protected.
Institutional Review Board (IRB) number
ClinicalTrials.gov is an ICMJE-acceptable public registry, offering up-to-date information for locating clinical trials for a wide range of diseases and conditions. The U.S. National Institutes of Health (NIH), through its National Library of Medicine (NLM), developed this site in collaboration with the Food and Drug Administration (FDA), as a result of the FDA Modernization Act, which was passed into law in November 1997. This property should be publically visible since it is one of the principal identifiers in a national registry of clinical trials
NCT00000419
National Clinical Trials (NCT) number
number of human participants in the study (trial).
study population count
additional name
The date of marriage, or equivalent, of the object the vCard represents
anniversary
To specify the birth date of the object the vCard represents
birthdate
calendar busy
calendar link
calendar request
category
country
email
Called Family Name in vCard
has last name
has formatted name
To specify the components of the sex and gender identity of the object the vCard represents.
To enable other Gender/Sex codes to be used, this dataproperty has range URI. The vCard gender code classes are defined under Code/Gender
gender
Must use the geo URI scheme RFC5870
geo
called Given Name invCard
first name
Called Honorific Prefix in vCard
honorific prefix
honorific suffix
instant message
key
Use 2 char language code from RFC5646
has language
locality
logo
nickname
note
organization name
organizational unit name
photo
postal code
product ID
region
related
revision
role
sort as
sound
source
street address
Telephone
timezone
title
To specify a value that represents a globally unique identifier corresponding to the entity associated with the vCard
uid
URL
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
geo:area
Area
geo:disputed
Disputed
geo:economic_region
Economic Region
geo:geographical_region
United Nations statistics department http://unstats.un.org/unsd/methods/m49/m49regin.htm
Transnational Region
geo:group
Group
1
1
geo:non_self_governing
UN Cartographic Section, Department of Field Support http://www.un.org/Depts/Cartographic/map/profile/world00.pdf
Non Self Governing
geo:organization
Organization
geo:other
Other
geo:self_governing
United Nations Map Library http://www.un.org/depts/dhl/maplib/countinfo.htm
Self Governing
geo:special_group
Special Group
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
geo:territory
Territory
ARG:0000008
ARG:2000008
Topic Weight Measurement
ARG:2000009
Expertise Measurement
ARG:2000010
Topic Weight Measurement Process
ARG:2000011
Expertise Measurement Process
ARG:2000021
Experience
ARG:2000022
specialty
ARG:2000376
Contact Qualifier
ARG:2000377
FOAF Profile
ARG:2000379
Contact
BFO:0000001
Entity
BFO:0000002
Continuant
BFO:0000003
Occurrent
BFO:0000004
Independent Continuant
BFO:0000006
Spatial Region
BFO:0000008
Temporal Region
BFO:0000015
Process
BFO:0000016
Disposition
BFO:0000017
realizable
RealizableEntity
the disposition of this piece of metal to conduct electricity.
the disposition of your blood to coagulate
the function of your reproductive organs
the role of being a doctor
the role of this boundary to delineate where Utah and Colorado meet
To say that b is a realizable entity is to say that b is a specifically dependent continuant that inheres in some independent continuant which is not a spatial region and is of a type instances of which are realized in processes of a correlated type. (axiom label in BFO2 Reference: [058-002])
All realizable dependent continuants have independent continuants that are not spatial regions as their bearers. (axiom label in BFO2 Reference: [060-002])
(forall (x t) (if (RealizableEntity x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (bearerOfAt y x t))))) // axiom label in BFO2 CLIF: [060-002]
(forall (x) (if (RealizableEntity x) (and (SpecificallyDependentContinuant x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (inheresIn x y)))))) // axiom label in BFO2 CLIF: [058-002]
Realizable Entity
BFO:0000019
Quality
BFO:0000020
Specifically Dependent Continuant
BFO:0000023
Only use if no specific subclasses of core:Role describe the role.
A person's, group's or organization's role in an endeavor
Only use this broad role class if no subclasses of role describe the item being classified.
Role
BFO:0000029
Site
BFO:0000031
Generically Dependent Continuant
BFO:0000034
Function
BFO:0000038
One-Dimensional Temporal Region
BFO:0000040
Material Entity
BFO:0000141
Immaterial Entity
BFO:0000148
Zero-Dimensional Temporal Region
ERO:0000004
instrument
A flow cytometer.
Material entity that is designed to have a function and play a role in scientific investigation.
PERSON: Melissa Haendel
http://en.wikipedia.org/wiki/Scientific_instrument
See OBI listserv discussion for considerations in defining instrument. http://sourceforge.net/tracker/index.php?func=detail&aid=2894801&group_id=177891&atid=886178
Instrument
ERO:0000005
service
A DNA sequencing service performed by a core lab.
An information content entity that describes a service performed by a person or organization with the objective of performing a technique, providing training, providing storage of data or material entities, or providing access to resources for another person or organization
PERSON: Melissa Haendel
PERSON: Melissa Haendel
Coordinate with NIF. NIF ID: nlx_res_20090105
Service
ERO:0000006
reagent
A plasmid can be used as a reagent.
Processed material that is used in a chemical reaction or other experimental process to detect, measure, examine, or produce other substances.
PERSON: Melissa Haendel
http://www.yourdictionary.com/reagent
Placeholder for class to be imported from the Reagent Ontology (ReO).
Reagent
ERO:0000007
Flow cytometry is a technique.
A technique is a planned process used to accomplish a specific activity or task.
PERSON: Melissa Haendel
http://en.wikipedia.org/wiki/Technique
Protocol is added to eagle-i temporarily until a relationship between the informatio entity "protocol" and these planned processes is created. This class refers to the axtual process not the document
Technique
ERO:0000012
A technician in a core laboratory.
Member of the International Conference on Complex Systems Organizing Committee
A role inhering in a person or organization that is realized when the bearer participates in providing a service to meet the need of another person or thing.
An role of an individual within his or her profession or institution; use outreach provider role for community service or other activities outside the profession.
PERSON: Nicole Vasilevsky
PERSON: Nicole Vasilevsky
Service Provider Role
ERO:0000014
A project to study the role of a specific protein in cell signaling.
A funded collection of investigations as described in a research proposal.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
Maybe SameAs "Investigation" but is the subject of funding
Research Project
ERO:0000015
human study
A clinical trial.
Research project that uses or collects measurements or assessments about humans.
PERSON: Melissa Haendel
OCRe
This should be imported from OCRE- but they currently have no generic human study type. Def is modified.
Human Study
ERO:0000016
A clinical trial to evaluate the efficacy of a new drug.
An interventional study that contains a set of procedures in medical research and drug development that are conducted to allow safety (or more specifically, information about adverse drug reactions and adverse effects of other treatments) and efficacy data to be collected for health interventions (e.g., drugs, diagnostics, devices, therapy protocols) that is performed over phases.
PERSON: Nicole Vasilevsky
http://en.wikipedia.org/wiki/Clinical_trial
Clinical Trial
ERO:0000020
biological specimen
Heart tissue obtained from an organism.
Material entity that is a portion or quantity of a biological material for use in testing, examination, or study. A biological specimen can be an individual animal, a population of organisms, or is a part of or derived from an animal, plant, part of a plant, or microorganism. When a taxon is described, it is typically based on a single specimen and is referred to as the holotype.
PERSON: Melissa Haendel
biospecimen
http://en.wikipedia.org/wiki/Specimen
Should have relationship to Organism
Biological Specimen
ERO:0000071
software
Microsoft Word is commonly used word processing software.
A general term primarily used for digitally stored data such as computer programs and other kinds of information read and written by computers.
PERSON: Melissa Haendel
http://en.wikipedia.org/wiki/Computer_software
IAO is a planned specification, in SWO is an Information artifact. In eagle-i, we have a need to collect material instances and is it thus currently classified as a material entity.
Software
ERO:0000224
The NIH is a funding agency.
A role inhering in a person or organization that is realized when the bearer participates in providing funding to a person or an organization for academic or business purposes.
PERSON: Nicole Vasilevsky
PERSON: Nicole Vasilevsky
Funding Role
ERO:0000225
A teacher.
A role inhering in a person or organization that is realized when the bearer participates in providing education to a student or group of students.
PERSON: Nicole Vasilevsky
PERSON: Nicole Vasilevsky
Educator Role
ERO:0000391
Allowing access to a microscope in a core lab.
A service offering that describes a service in which the consumer receives the right to use a resource (instrument, database, software, etc) that is owned or managed by a service provider. Ownership of the accessed resource remains with the service provider during and after provision of service.
PERSON: Matt Brush
PERSON: Matthew Brush
Coordinate with NIF
Access Service
ERO:0000392
A computer server.
A service offering that describes a service in which the consumer provides some material or data as input which a service provider stores and returns as output.
PERSON: Matt Brush
PERSON: Matthew Brush
coordinate with NIF. NIF ID:nlx_res_20090419
Storage Service
ERO:0000393
Training a researcher to use a microscope.
A service offering that describes a service in which the provider offers educational materials or events, such as courses, workshops or graduate programs, to the service consumer
PERSON: Matt Brush
PERSON: Matthew Brush
Coordinate with NIF. NIF ID: nlx_res_20090444
Training Service
ERO:0000394
Biopsy service.
A service offering that describes a service in which the provider makes physical changes to a specified input material entity with the objective of producing a new material entity form input materials, or modifying the input material entity, and returning this as output to the service consumer
PERSON: Nicole Vasilevsky
http://neurolex.org/wiki/Category:Production_service_resource
Coordinate with NIF: NIF ID: nlx_res_20090416
Material Processing Service
ERO:0000395
Flow cytometry analysis of T cells.
An analysis service offering that describes a service in which the consumer provides some input material and a service provider performs some analysis of this material to generate data that is returned to the service consumer.
PERSON: Nicole Vasilevsky
http://neurolex.org/wiki/Category:Analysis_service_resource
Coordinate with NIF: NIF ID: nlx_res_20090420
Material Analysis Service
ERO:0000396
Production of monoclonal antibodies from a hybridoma.
A material processing service offering that describes a service in which the provider makes physical changes to a specified input material that produce a new entity as specified output that is returned the service consumer. The specified output of a material production service can be contained within, derived from, or synthesized from specified input materials, but it represents a material entity that is of a distinct type from any of the specified input materials.
PERSON: Matthew Brush
http://neurolex.org/wiki/Category:Material_service_resource
Coordinate with NIF. NIF ID: nlx_res_20090418
Material Production Service
ERO:0000565
Technology Transfer Office
An organization that provides services for commercialization and licensing of technologies at an institution.
PERSON: Nicole Vasilevsky
PERSON: Nicole Vasilevsky
Technology Transfer Office
ERO:0000595
student research opportunity
Training grant to perform post-doctoral research.
A planned process carried out by a person or organization with the objective of performing research.
An offering through an ongoing program or single request of research support: internships, positions, financial awards or other forms of tangible or intangible support
PERSON: Nicole Vasilevsky
PERSON: Nicole Vasilevsky
Research Opportunity
ERO:0000776
A role that inheres in a person who maintains residency in the United states.
PERSON: Nicole Vasilevsky
PERSON: Nicole Vasilevsky
US Resident Role
ERO:0000777
A US resident role that inheres in an individual that is a legally recognized as a member of a state, with associated rights and obligations.
PERSON: Nicole Vasilevsky
http://en.wiktionary.org/wiki/citizen
US Citizen Role
ERO:0000778
A US resident role that inheres in an individual who is not a legally recognized subject or national of the United States.
PERSON: Nicole Vasilevsky
https://www.google.com/search?q=residency+status&ie=utf-8&oe=utf-8&aq=t&rls=org.mozilla:en-US:official&client=firefox-a#hl=en&client=firefox-a&hs=Bcx&rls=org.mozilla:en-US:official&q=citizen&tbs=dfn:1&tbo=u&sa=X&ei=micXT_DwMIjUiAK15tDUDw&ved=0CCgQkQ4&bav=on.2,or.r_gc.r_pw.,cf.osb&fp=7b67128a22f602af&biw=1609&bih=794
Non-US Citizen
ERO:0000779
An role that inheres in an individual who is not a citizen but who legally resides in another nation on a permanent or extended basis.
PERSON: Nicole Vasilevsky
http://connection.ebscohost.com/us/immigration-restrictions/overview-legal-and-illegal-immigration
Permanent Resident Role
ERO:0000780
A non-US citizen role that inheres in an individual who is residing in a country, but is neither a citizen nor a permanent resident.
PERSON: Nicole Vasilevsky
http://www.irs.gov/taxtopics/tc851.html
Non-Permanent Resident Role
ERO:0000783
A college student.
A role inhering in a person that is realized when the bearer participates a course of study, as in a school, college, university, etc.
PERSON: Nicole Vasilevsky
http://www.thefreedictionary.com/student
Student Role
ERO:0000784
A college student.
A student role inhering in a person that is realized when the bearer participates in a course of study at a college, university, etc. in pursuit of an associate or bachelor degree.
PERSON: Nicole Vasilevsky
http://www.thefreedictionary.com/student
Undergraduate Student Role
ERO:0000785
A PhD student at a university.
A student role inhering in a person that is realized when the bearer participates a course of study at a university or institution in pursuit of an graduate or professional degree.
PERSON: Nicole Vasilevsky
http://www.thefreedictionary.com/student
Graduate Student Role
ERO:0000786
A freshman in high school.
A student role inhering in a person that is realized when the bearer participates in a course of study at a secondary learning institution.
PERSON: Nicole Vasilevsky
http://www.thefreedictionary.com/student
High School Student Role
ERO:0000787
An employee at a university.
A role inhering in a person that is realized when the bearer participates in an occupation by which a person earns a living or spends their time.
PERSON: Nicole Vasilevsky
http://dictionary.reference.com/browse/employment
Employee Role
ERO:0000788
A professor at a university.
An employee role inhering in a person that is realized when the bearer participates in the teaching and/or administrative force of a university, college, or school.
PERSON: Nicole Vasilevsky
http://dictionary.reference.com/browse/faculty
Faculty Role
ERO:0000789
A research technician in a lab.
An employee role inhering in a person that is realized when the bearer is employed by an employer.
PERSON: Nicole Vasilevsky
PERSON: Nicole Vasilevsky
Staff Role
ERO:0000790
A student role inhering in a person that is realized when the bearer participates in a post-baccalaureate training program in pursuit of an additional bachelor degree or new or additional training in a particular field.
PERSON: Nicole Vasilevsky
PERSON: Nicole Vasilevsky
Post-Baccalaureate Trainee
ERO:0000914
A post-doctoral fellow.
A student role inhering in a person that is realized when the bearer participates in a post-graduate training program in pursuit of new or additional training in a particular field, such as a post-doctoral fellowship.
PERSON: Nicole Vasilevsky
PERSON: Nicole Vasilevsky
Post-Graduate Student Trainee Role
ERO:0001245
Licensing of a new technology.
A technique that authorizes a use (such as copying software or using a (patented) invention) to a licensee, sparing the licensee from a claim of infringement brought by the licensor.
PERSON: Nicole Vasilevsky
http://en.wikipedia.org/wiki/License
Licensing
ERO:0001254
Transport of a patient within a hospital.
A service offering that describes a service in which the provider facilitates the transport of some material entity to a specified destination for the service consumer.
PERSON: Matt Brush
PERSON: Matthew Brush
Transport Service
ERO:0001255
Technical support.
A service offering that describes a service in which the provider assists the consumer in activities directly or indirectly associated with the production and analysis or experimental research data.
PERSON: Matt Brush
PERSON: Matthew Brush
Support Service
ERO:0001256
Cryopreservation service.
A storage service offering that describes a service in which the consumer provides some material as input which a service provider stores and returns as output
PERSON: Matt Brush
PERSON: Matthew Brush
Material Storage Service
ERO:0001257
Storing data on a server.
A storage service offering that describes a service in which the consumer provides data as input, which a service provider stores and returns as output in its original form.
PERSON: Matt Brush
PERSON: Matthew Brush
Data Storage Service
ERO:0001258
A service offering that describes a service in which the provider actively maintains a material or data resource (e.g. a model organism colony or database) for the service consumer. This may involved making physical alterations to the material or data with the goal of maintaining its integrity or features.
PERSON: Matt Brush
PERSON: Matthew Brush
Maintenance Service
ERO:0001259
Maintaining an animal coloy.
A maintenance service offering that describes a service in which the provider actively maintains a material resource (e.g. a model organism colony) for the service consumer. A material maintenance service may or may not include storage of the material input.
PERSON: Matt Brush
PERSON: Matthew Brush
Material Maintenance Service
ERO:0001260
Maintaining a database.
A maintenance service offering that describes a service in which the provider actively manages or maintains data or a database for the service consumer. Maintenance of the data is performed to maintain its integrity or enhance its quality or utility for the consumer, but new data is not generated as a result of the maintenance.
PERSON: Matt Brush
PERSON: Matthew Brush
Data Maintenance Service
ERO:0001261
Flow cytometry analysis service.
A service offering that describes a service in which the consumer provides some input material or data and a service provider returns data about the input material or data.
PERSON: Matt Brush
PERSON: Matthew Brush
Analysis Service
ERO:0001262
Sequence data analysis.
An analysis service offering that describes a service in which the consumer provides some input data and a service provider transforms, models, or interprets the input data and returns this generated data as output
PERSON: Matt Brush
data processing service
data transformation service
PERSON: Matthew Brush
Data Analysis Service
ERO:0001263
Histology service.
A material processing service offering that describes a service in which the provider makes physical modifications to a specified input material, such that at least one of the specified outputs of this process is a modified version of a specified input material.
PERSON: Matt Brush
PERSON: Matthew Brush
Material Modification Service
ERO:0001716
A database is an organized collection of data, today typically in digital form.
PERSON: Carlo Torniai
http://en.wikipedia.org/wiki/Database
Just a place horder. It will probably be replaced by NIF term: http://ontology.neuinfo.org/NIF/DigitalEntities/NIF-Resource.owl#nlx_res_20090405
Database
IAO:0000003
measurement unit label
Examples of measurement unit labels are liters, inches, weight per volume.
A measurement unit label is as a label that is part of a scalar measurement datum and denotes a unit of measure.
2009-03-16: provenance: a term measurement unit was
proposed for OBI (OBI_0000176) , edited by Chris Stoeckert and
Cristian Cocos, and subsequently moved to IAO where the objective for
which the original term was defined was satisfied with the definition
of this, different, term.
2009-03-16: review of this term done during during the OBI workshop winter 2009 and the current definition was considered acceptable for use in OBI. If there is a need to modify this definition please notify OBI.
PERSON: Alan Ruttenberg
PERSON: Melanie Courtot
Measurement Unit Label
IAO:0000005
objective specification
purpose of a study; support of hypothesis, discovery of new information
a directive information entity that describes an intended process endpoint. When part of a plan specification the concretization is realized in a planned process in which the bearer tries to effect the world so that the process endpoint is achieved.
Answers the question, why did you do this experiment?
PERSON: Alan Ruttenberg
PERSON: Barry Smith
PERSON: Bjoern Peters
PERSON: Jennifer Fostel
OBI Plan and Planned Process/Roles Branch
OBI_0000217
Objective Specification
IAO:0000007
Pour the contents of flask 1 into flask 2
a directive information entity that describes an action the bearer will take
Alan Ruttenberg
OBI Plan and Planned Process branch
Action Specification
IAO:0000009
datum label
A label is a symbol that is part of some other datum and is used to either partially define the denotation of that datum or to provide a means for identifying the datum as a member of the set of data with the same label
http://www.golovchenko.org/cgi-bin/wnsearch?q=label#4n
GROUP: IAO
Datum Label
IAO:0000013
journal article
Examples are articles published in the journals, Nature and Science. The content can often be cited by reference to a paper based encoding, e.g. Authors, Title of article, Journal name, date or year of publication, volume and page number.
a report that is published in a journal
person:Alan Ruttenberg
person:Chris Stoeckert
OBI_0000159
group:OBI
Journal Article
IAO:0000027
data item
Data items include counts of things, analyte concentrations, and statistical summaries.
a data item is an information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements.
2/2/2009 Alan and Bjoern discussing FACS run output data. This is a data item because it is about the cell population. Each element records an event and is typically further composed a set of measurment data items that record the fluorescent intensity stimulated by one of the lasers.
2009-03-16: data item deliberatly ambiguous: we merged data set and datum to be one entity, not knowing how to define singular versus plural. So data item is more general than datum.
2009-03-16: removed datum as alternative term as datum specifically refers to singular form, and is thus not an exact synonym.
JAR: datum -- well, this will be very tricky to define, but maybe some
information-like stuff that might be put into a computer and that is
meant, by someone, to denote and/or to be interpreted by some
process... I would include lists, tables, sentences... I think I might
defer to Barry, or to Brian Cantwell Smith
JAR: A data item is an approximately justified approximately true approximate belief
PERSON: Alan Ruttenberg
PERSON: Chris Stoeckert
PERSON: Jonathan Rees
data
Data Item
IAO:0000030
information content entity
Examples of information content entites include journal articles, data, graphical layouts, and graphs.
The most general classification of an information resource
an information content entity is an entity that is generically dependent on some artifact and stands in relation of aboutness to some entity
information_content_entity 'is_encoded_in' some digital_entity in obi before split (040907). information_content_entity 'is_encoded_in' some physical_document in obi before split (040907).
Previous. An information content entity is a non-realizable information entity that 'is encoded in' some digital or physical entity.
PERSON: Chris Stoeckert
OBI_0000142
Information Content Entity
IAO:0000032
10 feet. 3 ml.
a scalar measurement datum is a measurement datum that is composed of two parts, numerals and a unit label.
2009-03-16: we decided to keep datum singular in scalar measurement datum, as in
this case we explicitly refer to the singular form
Would write this as: has_part some 'measurement unit label' and has_part some numeral and has_part exactly 2, except for the fact that this won't let us take advantage of OWL reasoning over the numbers. Instead use has measurment value property to represent the same. Use has measurement unit label (subproperty of has_part) so we can easily say that there is only one of them.
PERSON: Alan Ruttenberg
PERSON: Melanie Courtot
Scalar Measurement Datum
IAO:0000033
An information content entity whose concretizations indicate to their bearer how to realize them in a process.
8/6/2009 Alan Ruttenberg: Changed label from "information entity about a realizable" after discussions at ICBO
Werner pushed back on calling it realizable information entity as it isn't realizable. However this name isn't right either. An example would be a recipe. The realizable entity would be a plan, but the information entity isn't about the plan, it, once concretized, *is* the plan. -Alan
PERSON: Alan Ruttenberg
PERSON: Bjoern Peters
Directive Information Entity
IAO:0000102
data about an ontology part is a data item about a part of an ontology, for example a term
Person:Alan Ruttenberg
Data about an Ontology Part
IAO:0000104
plan specification
PMID: 18323827.Nat Med. 2008 Mar;14(3):226.New plan proposed to help resolve conflicting medical advice.
a directive information entity that when concretized it is realized in a process in which the bearer tries to achieve the objectives, in part by taking the actions specified. Plan specifications includes parts such as objective specification, action specifications and conditional specifications.
2009-03-16: provenance: a term a plan was proposed for OBI (OBI_0000344) , edited by the PlanAndPlannedProcess branch. Original definition was " a plan is a specification of a process that is realized by an actor to achieve the objective specified as part of the plan". It has been subsequently moved to IAO where the objective for which the original term was defined was satisfied with the definitionof this, different, term.
Alternative previous definition: a plan is a set of instructions that specify how an objective should be achieved
Alan Ruttenberg
OBI Plan and Planned Process branch
OBI_0000344
Plan Specification
IAO:0000109
measurement datum
Examples of measurement data are the recoding of the weight of a mouse as {40,mass,"grams"}, the recording of an observation of the behavior of the mouse {,process,"agitated"}, the recording of the expression level of a gene as measured through the process of microarray experiment {3.4,luminosity,}.
A measurement datum is an information content entity that is a recording of the output of a measurement such as produced by a device.
2/2/2009 is_specified_output of some assay?
person:Chris Stoeckert
OBI_0000305
group:OBI
Measurement Datum
IAO:0000144
conclusion textual entity
that fucoidan has a small statistically significant effect on AT3 level but no useful clinical effect as in-vivo anticoagulant, a paraphrase of part of the last paragraph of the discussion section of the paper 'Pilot clinical study to evaluate the anticoagulant activity of fucoidan', by Lowenthal et. al.PMID:19696660
A textual entity that expresses the results of reasoning about a problem, for instance as typically found towards the end of scientific papers.
2009/09/28 Alan Ruttenberg. Fucoidan-use-case
2009/10/23 Alan Ruttenberg: We need to work on the definition still
Person:Alan Ruttenberg
Conclusion Textual Entity
IAO:0000300
textual entity
Words, sentences, paragraphs, and the written (non-figure) parts of publications are all textual entities
A textual entity is a part of a manifestation (FRBR sense), a generically dependent continuant whose concretizations are patterns of glyphs intended to be interpreted as words, formulas, etc.
AR, (IAO call 2009-09-01): a document as a whole is not typically a textual entity, because it has pictures in it - rather there are parts of it that are textual entities. Examples: The title, paragraph 2 sentence 7, etc.
MC, 2009-09-14 (following IAO call 2009-09-01): textual entities live at the FRBR (http://en.wikipedia.org/wiki/Functional_Requirements_for_Bibliographic_Records) manifestation level. Everything is significant: line break, pdf and html versions of same document are different textual entities.
PERSON: Lawrence Hunter
text
Textual Entity
OBI:0000011
planned process
planned process
Injecting mice with a vaccine in order to test its efficacy
A processual entity that realizes a plan which is the concretization of a plan specification.
'Plan' includes a future direction sense. That can be problematic if plans are changed during their execution. There are however implicit contingencies for protocols that an agent has in his mind that can be considered part of the plan, even if the agent didn't have them in mind before. Therefore, a planned process can diverge from what the agent would have said the plan was before executing it, by adjusting to problems encountered during execution (e.g. choosing another reagent with equivalent properties, if the originally planned one has run out.)
Bjoern Peters
branch derived
Planned Process
OBI:0000017
regulatory role
Regulatory agency, Ethics committee, Approval letter; example: Browse these EPA Regulatory Role subtopics http://www.epa.gov/ebtpages/enviregulatoryrole.html Feb 29, 2008
a role which inheres in material entities and is realized in the processes of making, enforcing or being defined by legislation or orders issued by a governmental body.
GROUP: Role branch
OBI, CDISC
Regulatory Role
OBI:0000272
Protocol
protocol
PMID: 18388943.Nat Protoc. 2008;3(4):612-8.Protocol for the induction of arthritis in C57BL/6 mice.
a protocol is a plan specification which has sufficient level of detail and quantitative information to communicate it between domain experts, so that different domain experts will reliably be able to independently reproduce the process.
PlanAndPlannedProcess Branch
OBI branch derived + wikipedia (http://en.wikipedia.org/wiki/Protocol_%28natural_sciences%29)
Protocol
OBI:0000835
A person or organization that has a manufacturer role
Manufacturer
OBI:0001554
Rate Measurement Datum
OBI:0100026
organism
animal
fungus
plant
virus
A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs.
GROUP: OBI Biomaterial Branch
WEB: http://en.wikipedia.org/wiki/Organism
Organism
OBI:0500000
study design
A study design is a plan specification comprised of protocols (which may specify how and what kinds of data will be gathered) that are executed as part of an investigation and is realized during a study design execution.
Study Design
UO:0000280
Rate Unit
event:Event
Only use if no specific subclasses of event:Event are appropriate.
This class will also display instances of subclasses under Event, e.g. Philosophy Department Discussion Club; 2009 Racker Lecture; screening of a documentary. In addition to a location in space and time, an event may have any or all the following qualities: actively participating agents, passive factors, work products. Also, it may be in a virtual space or part of a series such as a lecture series.
The previous short definition was: "An arbitrary classification of a space/time region, by a cognitive agent."
Something that happens at a given place and time.
Event
ocrer:Interventional_study
ocresd:OCRE100038
Phase describes the level of a trial required of drugs before (and after) they are routinely used in clinical practice:
- Phase I trials assess toxic effects on humans (not many people participate in them, and usually without controls);
- Phase ll trials assess therapeutic benefit (usually involving a few hundred people, usually with controls, but not always);
- Phase III trials compare the new treatment against standard (or placebo) treatment (usually a full randomised controlled trial). At this point, a drug can be approved for community use.
- Phase IV monitors a new treatment in the community, often to evaluate longterm safety and effectiveness. [Glossary of Terms in The Cochrane Collaboration]
A trial can be of a combination phase (e.g., I/II).
The concept of phase is not applicable to trials studying certain interventions (e.g., device, procedure, behavioral)
Simona
Phase
ocresd:Phase_0
A Phase 0 trial is an exploratory trial involving very limited human exposure, with no therapeutic or diagnostic intent (e.g., screening study, microdose study). [http://prsinfo.clinicaltrials.gov/definitions.html]
Simona
Phase 0
ocresd:Phase_1
A Phase I trial assesses toxic effects on humans (not many people participate, and usually without controls) [Glossary of Terms in The Cochrane Collaboration]
Simona
Phase 1
ocresd:Phase_2
A Phase ll trial assesses therapeutic benefit (usually involving a few hundred people, usually with controls, but not always) [Glossary of Terms in The Cochrane Collaboration]
Simona
Phase 2
ocresd:Phase_3
A Phase III trial compares the new treatment against standard (or placebo) treatment (usually a full
randomised controlled trial). At this point, a drug can be approved for community use. [Glossary of Terms in The Cochrane Collaboration]
Simona
Phase 3
ocresd:Phase_4
A Phase IV study monitors a new treatment in the community, often to evaluate longterm safety and effectiveness. [Glossary of Terms in The Cochrane Collaboration]
Simona
Phase 4
ocresd:Single_group_study
A single group study is an interventional study that has only a single allocation group and no contemporaneuos comparison group.
A study in which an individual acts has his/her own comparison does not fall into this category, since an individual is not a group.
Simona
Simona: to be reviewed
Single Group Study
bibo:AcademicArticle
A specific academic journal article
Written by scholars for other scholars, typically published in an academic journal with an abstract and bibliography
A scholarly academic article, typically published in a journal.
http://purl.org/ontology/bibo/
Academic Article
stable
bibo:Article
A specific journal article
Short Definition modified from the bibo ontology.
A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a periodical or book
A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a book or other publication, as a newspaper or magazine.
http://purl.org/ontology/bibo/
Article
stable
bibo:AudioDocument
phonograph record; tape; CD; DVD; DAT
Recorded audio in any format
An audio document; aka record.
http://purl.org/ontology/bibo/
Audio Document
stable
bibo:AudioVisualDocument
film; video; Blu-ray
Audiovisual recording in any format
An audio-visual document; film, video, and so forth.
http://purl.org/ontology/bibo/
Audio-Visual Document
stable
bibo:Bill
Short Definition from the bibo ontology
Draft legislation presented for discussion to a legal body
Draft legislation presented for discussion to a legal body.
http://purl.org/ontology/bibo/
Bill
stable
bibo:Book
Short Definition copied from bibo ontology
A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers
A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers.
http://purl.org/ontology/bibo/
Book
stable
bibo:BookSection
Short Definition from the bibo ontology
A section of a book
A section of a book.
http://purl.org/ontology/bibo/
Book Section
unstable
bibo:Brief
A document stating the facts and points of law of a client's case
A written argument submitted to a court.
http://purl.org/ontology/bibo/
Brief
unstable
bibo:Chapter
A main division of a book
A chapter of a book.
http://purl.org/ontology/bibo/
Chapter
unstable
bibo:Code
Code of Federal Regulations
Short Definition from OCLC Input Standards, EntW
A work consisting of texts of rules and regulations related to statutes issued by executive or administrative agencies
A collection of statutes.
http://purl.org/ontology/bibo/
Code
stable
bibo:CollectedDocument
Short Definition is the Medical Subject Heading (MeSH) definition
Work consisting of collections of previously published works
A document that simultaneously contains other documents.
http://purl.org/ontology/bibo/
Collected Document
stable
bibo:Collection
Collection of information resources that have a unified identity. Archives, museums and libraries often acquire collections on specific subjects and from distinguished authors or researchers. Also includes collections of resources bundled into a license.
Hill Ornithology Collection; Wiley Interscience Online Books Biochemisty Collection
Collection of information resources that have a unified identity
A collection of Documents or Collections
http://purl.org/ontology/bibo/
Collection
stable
bibo:Conference
2010 International Congress on Autoimmunity; American Libraries Association 2009
core:Seminar and bibo:Conference are very similar.
A meeting for consultation or discussion.
A meeting for consultation or discussion.
http://purl.org/ontology/bibo/
Conference
stable
bibo:CourtReporter
Supreme Court Reporter
Collection of legal cases
A collection of legal cases.
http://purl.org/ontology/bibo/
Court Reporter
stable
bibo:Document
document
A journal article, patent application, laboratory notebook, or a book
Short Definition from the bibo ontology
A bounded physical representation of a body of information designed with the capacity (and usually intent) to communicate
A collection of information content entities intended to be understood together as a whole
PERSON: Lawrence Hunter
A document (noun) is a bounded physical representation of body of information designed with the capacity (and usually intent) to communicate. A document may manifest symbolic, diagrammatic or sensory-representational information.
http://purl.org/ontology/bibo/
Document
bibo:DocumentPart
Short Definition from the bibo ontology
A distinct part of a larger document or collected document
a distinct part of a larger document or collected document.
http://purl.org/ontology/bibo/
Document Part
unstable
bibo:DocumentStatus
The status of a document with respect to its publication. The statuses are represented as individuals of this class. Use the "show all individuals of this class" button on the class control panel to see the currently defined statuses.
submitted; accepted; in-press; published; invited; refereed.
The status of a document with respect to its publication.
The status of the publication of a document.
http://purl.org/ontology/bibo/
Document Status
stable
bibo:EditedBook
Best American Science Writing 2009
An edited collection of stand-alone articles published as a book
An edited book.
http://purl.org/ontology/bibo/
Edited Book
stable
bibo:Excerpt
Short Definition from the bibo ontology
A passage selected from a larger work
A passage selected from a larger work.
http://purl.org/ontology/bibo/
Excerpt
stable
bibo:Film
Audiovisual recording in film format
aka movie.
http://purl.org/ontology/bibo/
Film
stable
bibo:Hearing
Definiton from Bibo here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit.
An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit.
http://purl.org/ontology/bibo/
Hearing
stable
bibo:Image
photograph; diagram
A visual representation such as a photograph or graph
A document that presents visual or diagrammatic information.
http://purl.org/ontology/bibo/
Image
stable
bibo:Interview
radio or newspaper interview
A conversation between two or more people where questions are asked by the interviewer to obtain information from the interviewee.
A formalized discussion between two or more people.
http://purl.org/ontology/bibo/
Interview
stable
bibo:Issue
Short Definition from the bibo ontology
something that is printed or published and distributed, esp. a given number of a periodical
something that is printed or published and distributed, esp. a given number of a periodical
http://purl.org/ontology/bibo/
Issue
stable
bibo:Journal
Articles usually contain abstracts and bibliographies. Includes peer-reviewed, non-peer-reviewed, and open access journals. Journals are usually indexed in the major academic databases such as PubMed and Web of Science.
Journal of Information Science; IEEE Intelligent System; Scientometrics
Contains original scholarly research or review articles by experts in the field
A periodical of scholarly journal Articles.
http://purl.org/ontology/bibo/
Journal
stable
bibo:LegalCaseDocument
Official court papers for a case
A document accompanying a legal case.
http://purl.org/ontology/bibo/
Legal Case Document
unstable
bibo:LegalDecision
The written determination of a case, motion or claim by a court or tribunal
A document containing an authoritative determination (as a decree or judgment) made after consideration of facts or law.
http://purl.org/ontology/bibo/
Decision
unstable
bibo:LegalDocument
a document that states some contractual relationship or grants some right
A legal document; for example, a court decision, a brief, and so forth.
http://purl.org/ontology/bibo/
Legal Document
stable
bibo:Legislation
From OCLC Input Standards, EntW
Enactments of legislative bodies, published in either statute or code form
A legal document proposing or enacting a law or a group of laws.
http://purl.org/ontology/bibo/
Legislation
unstable
bibo:Letter
A written or printed communication addressed to a person or organization and usually transmitted by mail
A written or printed communication addressed to a person or organization and usually transmitted by mail
Letter
bibo:Magazine
Abstracts and bibliographies are usually not included in magazines.
New Yorker
Contains articles of current events or general interest, geared to the reading public as being informative or recreational
A periodical of magazine Articles. A magazine is a publication that is issued periodically, usually bound in a paper cover, and typically contains essays, stories, poems, etc., by many writers, and often photographs and drawings, frequently specializing in a particular subject or area, as hobbies, news, or sports.
http://purl.org/ontology/bibo/
Magazine
stable
bibo:Manual
SDB User Manual
A book of instructions or guide to a specific topic
A small reference book, especially one giving instructions.
http://purl.org/ontology/bibo/
Manual
unstable
bibo:Manuscript
Short Definition is the Medical Subject Heading (MeSH) definition
Works prepared by hand including handwritten or typescript drafts of pre-publication papers or works not otherwise reproduced in multiple copies
An unpublished Document, which may also be submitted to a publisher for publication.
http://purl.org/ontology/bibo/
Manuscript
manuscript
stable
bibo:Map
The Short Definition is how the bibo ontology defines Map. It has been extended to include more broader concept of map which includes science maps, social network maps.
A graphical depiction of geographic features, scientific discipline, scientific data analytical results
A graphical depiction of geographic features.
http://purl.org/ontology/bibo/
Map
unstable
bibo:Newspaper
USA Today
Contains news articles, opinions, features, advertising, and is usually issued daily or weekly
A periodical of documents, usually issued daily or weekly, containing current news, editorials, feature articles, and usually advertising.
http://purl.org/ontology/bibo/
Newspaper
stable
bibo:Note
Short Definition from bibo ontology
Notes or annotations about a resource
Notes or annotations about a resource.
http://purl.org/ontology/bibo/
Note
stable
bibo:Patent
A patent is an exclusive right granted for an invention, which is a product or a process that provides, in general, a new way of doing something, or offers a new technical solution to a problem. In order to be patentable, the invention must fulfill certain conditions. (http://www.wipo.int/patentscope/en/)
(from BIBO) A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years
A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years.
http://purl.org/ontology/bibo/
Patent
stable
bibo:Performance
Something carried out, acted or rendered.
A public performance.
http://purl.org/ontology/bibo/
Performance
unstable
bibo:Periodical
A group of related documents issued at regular intervals.
http://purl.org/ontology/bibo/
Periodical
stable
bibo:PersonalCommunicationDocument
A personal communication manifested in some document.
A personal communication manifested in some document.
Personal Communication Document
bibo:Proceedings
Short Definition copied from bibo ontology
A compilation of documents published from an event, such as a conference
A compilation of documents published from an event, such as a conference.
http://purl.org/ontology/bibo/
Proceedings
unstable
bibo:Quote
Short Definition from the bibo ontology
An excerpted collection of words
An excerpted collection of words.
http://purl.org/ontology/bibo/
Quote
stable
bibo:ReferenceSource
Short Definition from the bibo ontology
A document that presents authoritative reference information, such as a dictionary or encylopedia
A document that presents authoritative reference information, such as a dictionary or encylopedia .
http://purl.org/ontology/bibo/
Reference Source
unstable
bibo:Report
Medical Subject Heading (MeSH) definition of Technical Report: Work consisting of a formal report giving details of the investigation and results of a medical or other scientific problem. When issued by a government agency or comparable official body, its contents may be classified, unclassified, or declassified with regard to security clearance. This publication type may also cover a scientific paper or article that records the current state or current position of scientific research and development. If so labeled by the editor or publisher, this publication type may be properly used for journal articles.
A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc.
A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc..
http://purl.org/ontology/bibo/
Report
stable
bibo:Series
Methods in Molecular Biology
A thematic collection of documents, usually books, issued at regular or irregular intervals
A loose, thematic, collection of Documents, often Books.
http://purl.org/ontology/bibo/
Series
stable
bibo:Slide
Short Definition from the bibo ontology
A slide in a slideshow
A slide in a slideshow
http://purl.org/ontology/bibo/
Slide
unstable
bibo:Slideshow
Short Definition from the bibo ontology
A presentation of a series of slides, usually presented in front of an audience with written text and images
A presentation of a series of slides, usually presented in front of an audience with written text and images.
http://purl.org/ontology/bibo/
Slideshow
stable
bibo:Standard
Short Definition from OCLC Input Standards, EntW
A specification giving a precise statement of a process or a service requirement, often sanctioned by a nation or industry
A document describing a standard
http://purl.org/ontology/bibo/
Standard
stable
bibo:Statute
Short Definition from bibo ontology
A bill enacted into law
A bill enacted into law.
http://purl.org/ontology/bibo/
Statute
stable
bibo:Thesis
Short Definition from OCLC Input Standards, EntW
Works created to satisfy the requirements for an academic certification or degree; also called dissertation
A document created to summarize research findings associated with the completion of an academic degree.
http://purl.org/ontology/bibo/
Thesis
stable
bibo:ThesisDegree
Different from general academic degree, thesis degree is achieved through one's completed thesis. Thesis is a document submitted in support of candidature for a degree or professional qualification presenting the author's research and findings(http://en.wikipedia.org/wiki/Thesis_or_dissertation).
Doctor of Philosophy (Ph.D.)
The academic degree of a Thesis.
The academic degree of a Thesis
http://purl.org/ontology/bibo/
Thesis Degree
stable
bibo:Webpage
One section of a website that appears at a unique address within the parent site's address or URL on the World Wide Web
A web page is an online document available (at least initially) on the world wide web. A web page is written first and foremost to appear on the web, as distinct from other online resources such as books, manuscripts or audio documents which use the web primarily as a distribution mechanism alongside other more traditional methods such as print.
http://purl.org/ontology/bibo/
Webpage
unstable
bibo:Website
Facebook; VIVOweb.org; Flickr
A group of webpages available within a specific parent address or URL on the World Wide Web
A group of Webpages accessible on the Web.
http://purl.org/ontology/bibo/
Website
unstable
bibo:Workshop
Bibo Definition: A seminar, discussion group, or the like, that emphasizes exchange of ideas and the demonstration and application of techniques, skills, etc.
A seminar, discussion group, or the like, that emphasizes zxchange of ideas and the demonstration and application of techniques, skills, etc.
http://purl.org/ontology/bibo/
Workshop
stable
c4o:BibliographicInformationSource
A source of information about bibliographic citations, such as Google Scholar, Web of Science or Scopus.
A source of information about bibliographic citations, such as Google Scholar, Web of Science or Scopus.
Bibliographic Information Source
c4o:GlobalCitationCount
The number of times a work has been cited globally, as determined from a particular bibliographic information source on a particular date.
The number of times a work has been cited globally, as determined from a particular bibliographic information source on a particular date.
Global Citation Count
fabio:ClinicalGuideline
A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work.
Clinical Guideline
fabio:Comment
A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by
A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by a special syntactic symbol that ensures they are ignored during execution of the program.
has super-classes
Comment
fabio:Erratum
A formal correction to an error introduced by the publisher into a previously published document.
Erratum
vivo:Abstract
An abstract that is published as a standalone document or in a journal of abstracts
Abstract
1
vivo:AcademicDegree
B.A. Bachelor of Arts
This list may have multiple abbreviations for some degrees.
An academic degree at any level, both as reported by individuals for employment and as offered by academic degree programs.
Academic Degree
vivo:AcademicDepartment
Endodontics (department within a College of Dentistry); English (department within a College of Liberal Arts)
A distinct, usually specialized educational unit within an educational organization.
Academic Department
vivo:AcademicTerm
An explicit individual academic term, quarter, or semester rather than the generic fall, spring or summer semester.
Academic Term
vivo:AcademicYear
An explicit individual period considered by an academic institution to be its primary academic cycle.
Academic Year
vivo:AdministratorRole
Administrator Role
vivo:AdviseeRole
Advisee Role
vivo:AdvisingProcess
Advising Process
vivo:AdvisingRelationship
A dual relationship of one person being advised or mentored by another person, typically including start and end dates
Advising Relationship
vivo:AdvisorRole
Advisor Role
vivo:Association
Special Libraries Association; Association for Computing Machinery(ACM); American Medical Informatics Association(AMIA)
A formal organization of people or groups of people around a subject or practice.
A group of persons or organizations organized for a common purpose.
Association
vivo:AttendeeRole
A role of attending an Event or EventSeries
Attendee Role
vivo:AttendingProcess
Attending Process
vivo:Authorship
Authorship of journal articles, books and other original works is a means by which academics communicate the results of their scholarly work, establish priority for their discoveries, and build their reputation among their peers.
This class allows for linking an author to a publication while indicating information about that author's authorship.
Currently any abstract name is given to members of this class. This could change in the future.
Contains the authors name, their rank in the publication, and whether or not they are a corresponding author on the publication.
Authorship
vivo:Award
An Award or Honor
Wiley Prize in Biomedical Sciences
An Award or Honor
Award or Honor
vivo:AwardReceipt
The award bestowed may be represented with the Award class.
The bestowal of an award, honor, or distinction to a person or person's at a particular time.
Award or Honor Receipt
vivo:AwardedDegree
The awarding of a degree by an agent to another agent. It is mostly for academic degrees.
Awarded Degree
vivo:Blog
Blog is short for weblog.
Library of Congress Blog
Regularly updated online journal or newsletter by one or more writers, called bloggers, containing articles and commentary of interest to the blogger
Blog
vivo:BlogPosting
A specific blog posting
An online article or commentary appearing on a blog
Blog Posting
vivo:Building
Enter building name. If the building's name is a number (as in many governmental organizations such as national laboratories and military bases), then enter it. Do not confuse with the number that appears in a postal address.
Martha Van Rensselaer Hall (VR); Caldwell Hall (CD); University Auditorium
Building that provides a particular service or is used for a particular activity.
Building
vivo:Campus
Cornell Ithaca; Cornell Geneva; Cornell New York City; Cornell Qatar
Definition taken from dictionary.com (http://dictionary.reference.com/browse/campus).
The grounds of a school, college, university, or hospital. Or, a large, usually suburban, landscaped business or industrial site.
Campus
vivo:CaseStudy
A form of qualitative descriptive research that is used to study individuals, a small group of participants, or a group as a whole. Medical usage (from MeSH): clinical presentations that may be followed by evaluative studies that eventually lead to a diagnosis.
A qualitative descriptive research study of individuals or a group
Case Study
vivo:Catalog
NLM Catalog
Short Definition is the Medical Subject Heading (MeSH) definition
A list of items in a collection; an ordered compilation of item descriptions and sufficient information to afford access to them
Catalog
vivo:Center
Alchohol Education Center; Center for Arts and Public Policy; Hearing Research Center
Short Definition take from http://www.thefreedictionary.com/center.
A place where a particular activity or service is concentrated.
An organization where a specified activity is concentrated.
Center
vivo:Certificate
A document confirming certain characteristics of a person or organization, usually provided by some form of external review, education, or assessment.
A document confirming certain characteristics of a person or organization, usually provided by some form of external review, education, or assessment.
Certificate
vivo:Certification
see also core:Certificate
An issued certificate
Certification
vivo:ClinicalOrganization
In the future we may be able to make this a defined class that would not need to be directly asserted, but the consensus seems to be that some organizations "are" clinical and some "are" research organizations and that the distinction is important enough to warrant the additional class and class assertions
Any organization that offers significant health services or routinely provides medical care to patients.
Any organization with a significant clinical function as a matter of course and not just through occasional clinical roles
Clinical Organization
vivo:ClinicalRole
A role of observing or treating patients
Clinical Role
vivo:CoPrincipalInvestigatorRole
Role of co-principal investigator of an Agreement (for example, a grant), who devotes a specified percentage of time and is considered key personnel.
Co-Principal Investigator Role
vivo:College
College of Arts & Sciences; Ivy Tech Community College
A primary academic unit within a University or a free-standing higher education organization without graduate degree programs
A primary academic unit within a University or a free-standing higher education organization without graduate degree programs.
College
vivo:Committee
Curriculum Steering Committee; PhD Advisory Committee
There could be many subclasses such as thesis committee or tenure committee, but these may typically be differentiated via the moniker unless distinct properties become important.
A group of people organized for a specific purpose (e.g., a reporting or advisory role), often with a charge and for a specific duration
A group of people organized for a specific purpose, whose members are often selected from a larger group to serve for designated periods of time.
Committee
vivo:Company
from Wikipedia: "A company is a form of business organization. It is an association or collection of individual real persons and/or other companies ... This collection, group or association of persons can be made to exist in law and then a company is itself considered a "legal person". The name company arose because, at least originally, it represented or was owned by more than one real or legal person."
A legally-recognized business organization
A legally-recognized business organization.
Company
vivo:Competition
Intel Talent Search; poetry contest
Not the same as an award or distinction.
An occasion on which a winner is selected from among two or more contestants.
Competition
vivo:ConferencePaper
A paper presented at a conference; optionally collected into a Proceedings or a special Journal issue
Conference Paper
vivo:ConferencePoster
The digital file (or physical equivalent), if available after the conference, vs. the act of attending/presenting: use ConferencePresentation for information about date/time/location/name of the event where the poster was presented
Conference Poster
vivo:ConferenceSeries
For individual, separate conferences, use conference instead. core:ConferenceSeries and core:SeminarSeries are very similar.
An organized series of a meeting for consultation or discussion.
Conference Series
vivo:Consortium
Committee on Institutional Cooperation (CIC); The Five Colleges of Ohio
A group of independent organizations working together toward a common goal, under an expressed agreement.
Consortium
vivo:Continent
Short Definition take from http://en.wiktionary.org/wiki/continent.
The seven commonly recognized continents are Africa; Antarctica; Asia; Australia; Europe; North America; South America
A large contiguous landmass that is at least partially surrounded by water, together with any islands on its continental shelf.
Continent
vivo:Contract
An agreement involving specific deliverables and payment
Contract
vivo:CoreLaboratory
A lab providing services such as training, protocols, or access to instruments or software
Core Laboratory
vivo:Country
Afghanistan; Antigua and Barbuda; Cameroon; Iceland; Jamaica; Nigeria; United States of America
Source of the Short Definition: http://www.thefreedictionary.com/country. This is also the same as geopolitical.owl:self_governing.
An area of land distinguished by its political autonomy. Politically independent territories.
Country
vivo:County
Alachua; Baker; Bradford; Kenora; Ottawa; Waterloo
Short Definition modified from the one found here: http://www.thefreedictionary.com/county.
The largest administrative division of most states or provinces.
County
vivo:Course
A course as taught in one time period (such as a semester; although note that a course could consist of only one meeting (teaching session)) by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010
A course as taught in one time period by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010
Course
vivo:Credential
An attestation of qualification, competence, or authority issued to an individual by a third party with a relevant or de facto authority or assumed competence to do so.
An attestation of qualification, competence, or authority issued to an individual by a third party with a relevant or de facto authority or assumed competence to do so.
Credential
vivo:Database
PubMed
Short Definition is the Medical Subject Heading (MeSH) definition
A structured file of information or a set of logically related data stored and retrieved using computer-based means
Database
vivo:Dataset
US Patent Data; US Job Data
A named collection of data, usually containing only one type of data
Dataset
vivo:DateTimeInterval
a specific period or duration, defined by (optional) start and end date/times.
Date/Time Interval
vivo:DateTimeValue
A date and/or time
Date/Time Value
vivo:DateTimeValuePrecision
Indicates the precision of the value of a DateTimeValue instance.
Date/Time Value Precision
vivo:Department
Definition modified from the definition here: http://dictionary.reference.com/browse/department. It is difficult to tell the difference between and department and a division.
Legal (department within a company); Use for any non-academic department
A unit within a larger organization that addresses a specific subject or area of activity.
Department
vivo:Division
Cardiovascular Medicine (division within medicine)
Definition modified from http://www.thefreedictionary.com/division. It is difficult to tell the difference between a division and a department.
A major unit or section within a larger organization.
Division
vivo:EditorRole
An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series
An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series
Editor Role
vivo:EditorialArticle
An article of opinion, typically published in a newspaper. For academics, most commonly Op Ed pieces
Editorial Article
vivo:Editorship
A relationship that represents the recognition of an agent as an editor.
Editorship
vivo:EducationalProcess
Currently any abstract name is given to individuals of this class. This could change in the future.
Represents educational training that has been received.
This connects person to their academic degree through this educational training, but can also be used when the training does not result in a degree.
Educational Process
vivo:EmeritusFaculty
A retired faculty member who has retained their rank, title and privileges.
Faculty Member Emeritus
vivo:EmeritusLibrarian
A retired librarian who has retained their rank, title and privileges.
Librarian Emeritus
vivo:EmeritusProfessor
A retired professor who has retained their rank, title and privileges.
Professor Emeritus
vivo:Equipment
A network server is one example. Medical schools and research laboratories can list professional equipment, such as microscopes.
server; Bruker Vector-33 FT-IR
A physical object provided for specific purpose, task or occupation.
Equipment
vivo:EventSeries
A generic class which may include a conference series, a course section, a seminar series, or a workshop series. When possible, use one of these more specific classes.
Only use if no specific subclasses of core:EventSeries desribe the activity.
Two or more events that occur at different times and are connected to each other.
Event Series
vivo:Exhibit
The showing of an object or a collection of objects, in an organized manner.
Exhibit
vivo:ExtensionUnit
Alachua County Extension Office
A unit devoted primarily to extension activities, whether for outreach or research
A unit devoted primarily to extension activities, whether for outreach or research.
Extension Unit
vivo:F1000Link
F1000 is a place where faculty go to critique papers published in PubMed. Any given record in F1000 might have anywhere from one to dozens of reviews.
F1000 Link
vivo:Facility
Distinct from the organization that runs it; e.g., a laboratory may be an organization but may be run by another organization and only consist of facilities housing equipment or services. Can be a building or place that provides a particular service or is used for a particular activity. Use the specific Building or Room whenever possible. Short definition from http://dictionary.reference.com/browse/facility.
Use subclasses of core:Facility subclasses instead of this class if possible
Something designed, built, installed, etc., to serve a specific function or activity affording a convenience or service.
Facility
vivo:FacultyAdministrativePosition
Associate Dean
That is a position held by an academic faculty member who works for administration.
An academic administrative position (associate dean, etc.) as distinct from a professional administrative position (non-academic)
Faculty Administrative Position
vivo:FacultyMember
A person with at least one academic appointment to a specific faculty of a university or institution of higher learning.
Definition from here: http://research.carleton.ca/htr/defs.php.
Faculty Member
vivo:FacultyMentoringRelationship
An advisory relationship in which one faculty member mentors another faculty member.
Faculty Mentoring Relationship
vivo:FacultyPosition
Professor, associate professor and assistant professor are common positions for academic faculty.
Professor; Associate Professor; Assistant Professor
Academic position in a university or institution
Faculty Position
vivo:Foundation
Definition take from: http://dictionary.reference.com/browse/foundation.
The Ford Foundation
An institution founded with an endowment to support educational, research, artistic or other charitable activities.
Foundation
vivo:FundingOrganization
National Institute of Health (NIH)
A defined class of organizations that fund Grants
An organization that provides financial support to individuals or organizations to carry out specified activities.
Funding Organization
vivo:GeographicLocation
Removed the word "stable" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. I've also copied this definition to core:Geographic Location. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion.
Use subclasses of core:Geographic Location subclasses instead of this class if possible.
A location having coordinates in geographic space.
Geographic Location
vivo:GeographicRegion
Removed the word "stable" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. This definition was originally in core:Geographic Location. I simply copied the definition from there. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion.
Use subclasses of core:Geographic Region subclasses instead of this class if possible.
A location having coordinates in geographic space.
Geographic Region
vivo:GeopoliticalEntity
Short definition obtained here: http://en.wiktionary.org/wiki/geopolitical_entity.
Use subclasses of core:GeopoliticalEntity subclasses instead of this class if possible.
A geographical area which is associated with some sort of political structure.
Geopolitical Entity
vivo:GovernmentAgency
Definition take from: http://en.wikipedia.org/wiki/Government_agency.
United States Library of Congress
A unit of government responsible for oversight and regulation of certain activities or the administration and provision of specific services.
Government Agency
vivo:GraduateAdvisingRelationship
An advisory relationship in which a professor advises a graduate student.
Graduate Advising Relationship
vivo:GraduateStudent
A person who has already received a bachelor's degree and is working toward a Master's or Doctoral degree.
Graduate Student
vivo:Grant
An intramural or extramural award to support scholarly work, such as UF09179 (VIVO)
Short definition is from the Glossary of NIH Terms.
Financial assistance mechanism providing money, property, or both to an eligible entity to carry out an approved project or activity
Grant
vivo:Hospital
Definition take from: http://dictionary.reference.com/browse/hospital.
Shands at the University of Florida
An institution that provides medical, surgical, psychiatric or nursing care.
Hospital
vivo:Institute
Institute for Fundamental Theory
An Institute normally has a research focus but may also fulfill instructional or outreach roles
An organization founded to pursue or promote certain research, educational or public policy interests or activities.
Institute
vivo:Internship
Typically a student or a recent graduate undergoing supervised practical training.
Internship
vivo:InvestigatorRole
A role in an Agreement (for example, a grant) as a named investigator or key personnel.
Investigator Role
vivo:InvitedTalk
Invited Talk
vivo:IssuedCredential
Issued Credential
vivo:Laboratory
An organization unit that facilitates or conduits observation, testing, experimentation, or research in a field of study or practice.
An organizational unit (as opposed to the physical facility) that performs research, provides services, or processes materials
Laboratory
vivo:LeaderRole
A broad-ranging leader concept, from leading a small temporary committee to head of a large international organization.
A leadership role
Leader Role
vivo:Librarian
A person working in a position of librarian or information professional, or academic or technical expert in support of providing information services or materials.
Librarian
vivo:LibrarianPosition
It is the common position in libraries.
Librarian; Library Systems Analyst; Music Bibliographer
A position held by library and information science professionals, or academic or technical experts, in support of providing information services or materials
Librarian Position
vivo:Library
Marston Science Library
Used information from this definition: http://dictionary.reference.com/browse/library.
An organization maintaining one or more collections of physical and/or electronic information resources for access or lending.
Library
vivo:License
Licenses are usually issued in order to regulate some activity that is deemed to be dangerous or a threat to the person or the public or which involves a high level of specialized skill. See also core:Licensure.
Official or legal permission to do something
License
vivo:Licensure
A granted license, which gives a 'permission to practice.' Such licenses are usually issued in order to regulate some activity that is deemed to be dangerous or a threat to the person or the public or which involves a high level of specialized skill. See also core:License.
A granted license, which gives a 'permission to practice.'
Licensure
vivo:Location
It's anticipated that the subclasses will be used when classifying items. And, all locations can be viewable via this class.
Use subclasses of core:Location when classsifying items.
Top level of all location classes.
Location
vivo:MedicalResidency
Residency is a stage of graduate medical training.
Medical Residency
vivo:Meeting
A gathering of people for a defined purpose, not necessarily public or announced
Meeting
vivo:MemberRole
A role of being a member in a Process or an Organization
Member Role
vivo:Museum
Definition was take from here: http://dictionary.reference.com/browse/museum
The Getty Museum
An organization devoted to the acquisition, conservation, study, exhibition, and educational interpretation of objects having scientific, historical, cultural or artistic value.
Museum
vivo:NewsRelease
A short written piece focused on an event or announcement of note, having a defined publication time and of less enduring interest than a news feature.
News Release
vivo:Newsletter
The Ornithological Newsletter
Usually issued periodically, prepared by or for a group or institution to present information to a specific audience, often also made available to the press and public
Newsletter
vivo:NonAcademic
A person holding a position that is not considered to be an academic appointment.
Non-Academic
vivo:NonAcademicPosition
Accounting & Research Services Assistant; Director of Information Technology
Staff, support, and other non-academic positions.
A position classified as professional, staff, support, or any other non-academic role
Non-Academic Position
vivo:NonFacultyAcademic
A person not considered a faculty member but holding an academic appointment.
Non-Faculty Academic
vivo:NonFacultyAcademicPosition
Researcher; Academic Extension Associate; Postdoctoral Associate
Those positions are held by people who do academic work but do not have faculty positions in universities or institutes.
A position involving academic work but without faculty status
Non-Faculty Academic Position
vivo:OrganizerRole
A role of organizing
Organizer Role
vivo:OrganizingProcess
Organizing Process
vivo:OutreachProviderRole
Communicating Astronomy to the Public
The example is one outreach role required by US space agency NASA, which is related with one project in NASA. Name of the outreach role should be put here.
An outreach or community service role directed outside a person's primary profession and institution
Outreach Provider Role
vivo:PeerReviewerRole
is a generic term for a process of self-regulation by a profession or a process of evaluation involving qualified individuals within the relevant field. Peer review methods are employed to maintain standards, improve performance and provide credibility. In academia the term is often used to denote a prepublication review of academic papers; reviewing an academic paper is often called refereeing.
Contents
[hide]
A role of peer reviewing
Peer Reviewer Role
vivo:PopulatedPlace
Either city or town - a thickly populated area having fixed boundaries and certain local powers of government.
Populated Place
vivo:Position
An employment activity, whether compensated or not. Short definition comes from http://en.wikipedia.org/wiki/Position, and has been modified.
Director of Admissions and Placement; Associate University Librarian
Particular position in an organization, commonly identified by job title, and normally associated with a job description that details the tasks and responsibilities that go with the position.
Position
vivo:Postdoc
A Person holding an academic employment appointment focused on research rather than teaching; temporary (or for some defined term)
Postdoc
vivo:PostdocOrFellowAdvisingRelationship
An advisory relationship in which the advisee is a Postdoc or Fellow.
Postdoc or Fellow Advising Relationship
vivo:PostdocPosition
A postdoctoral training appointment (job)
Postdoctoral Position
vivo:PostdoctoralTraining
Postdoctoral research is academic or scholarly research conducted by a person who has completed his or her doctoral studies, normally within the following five years. It is intended to further deepen expertise in a specialist subject.
Postdoctoral Training
vivo:Presentation
Encompasses talk, speech, lecture, slide lecture, conference presentation
Presentation
vivo:PresenterRole
Are we assuming that a PresenterRole is in a Presentation? Or could you have a PresenterRole in, say, a committee?
A role of presenting information
Presenter Role
vivo:PresentingProcess
Presenting Process
vivo:PrimaryPosition
A position designated as primary by the organization or group where it is held. This designation may be applied to zero or more of an agent's positions and may be asserted in conjunction with other subclasses of position.
A position designated as primary by the organization where it is held.
Primary Position
vivo:PrincipalInvestigatorRole
Role of a person to direct a project or activity being supported by an Agreement (for example, a grant), and who is accountable to the grantee for the proper conduct of the project or activity. Also known as Program Director or Project Director.
Principal Investigator Role
vivo:PrivateCompany
Definition obtained here: http://answers.ask.com/Business/Finance/what_is_a_private_company. Examples of private companies found here: http://www.forbes.com/2008/11/03/largest-private-companies-biz-privates08-cx_sr_1103private_land.html
Publix Super Markets; Ernst & Young; PricewaterhouseCoopers
A private company is one that is privately-owned, and thus, is not publicly-traded in the stock market. Members of the general public cannot purchase stock in a private company unless that company chooses to go public and become a public company.
Private Company
vivo:Program
A Cornell graduate field (http://vivo.cornell.edu/index.jsp?home=65535&collection=820)
An ongoing academic initiative not formalized with department or division status.
Program
vivo:Project
An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim.
An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim.
Project
vivo:Publisher
Definition found here: http://dictionary.reference.com/browse/publisher
Elsevier; Harper & Row; Indiana University Press
A person or company whose business is the publishing of books, periodicals, engravings, computer software, etc.
Publisher
vivo:Relationship
functions as an n-ary predicate
a reified relationship
Relationship
vivo:ResearchOrganization
Any organization (likely also asserted as another class of Organization) with a primary, ongoing research function, not just through occasional roles
Research Organization
vivo:ResearchProposal
A proposal for a research grant that has been submitted but not approved; does not represent an existing activity
Research Proposal
vivo:ResearcherRole
Examples of research can be seen at: http://www.ufl.edu/research/products/index.html. Note these may have been funded, but the research doesn't have to be funded. Also, the research may be linked to an Agreement (for example, a Grant), but does not need to be.
A role of conducting funded or unfunded research, sometimes linked to an Agreement.
Researcher Role
vivo:Review
An article reviewing one or more other information resources (a book, one or more other articles, movies, etc)
Review
vivo:ReviewerRole
A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper.
A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper.
Reviewer Role
vivo:Room
100 Caldwell Hall; 114 Martha Van Rensselaer (Rushmore Conference Room)
Enter room number of name.
Room that provides a particular service or is used for a particular activity.
Room
vivo:School
Definition take from here: http://dictionary.reference.com/browse/school.
School of Architecture; School of Music
An institution for instruction in a particular skill or field.
School
vivo:Score
Written musical composition for voice or instruments or both
Score
vivo:Screenplay
Written script for a film production, including dialogue and descriptions of gestures, actions, shooting directions
Screenplay
vivo:SeminarSeries
Applied Microeconomics Seminars; Future of Rural New York Seminar Series
For individual seminars, use seminar instead. core:ConferenceSeries and core:SeminarSeries are very similar.
An organized series of a meeting for an exchange of ideas, typically put on by a department or center.
Seminar Series
vivo:ServiceProvidingLaboratory
Ideally a defined class -- a Laboratory the provides some Service via the property
A laboratory that provides services
Service Providing Lab
vivo:Speech
Text of a speech written in preparation for delivery of the speech.
Speech
vivo:StateOrProvince
Minnesota; Michigan; Indiana; New York; Quebec; Manitoba; Ontario
Source of the Short Definition: http://www.thefreedictionary.com/state.
One of a number of areas or communities having their own governments and forming a federation under a sovereign government, as in the US.
State or Province
vivo:Student
Use only if no specific subclasses of core:Student describe the person.
A person who is enrolled in an educational institution.
Student
vivo:StudentOrganization
Dancin' Gators
Definition take from here: http://en.wikipedia.org/wiki/Student_society
A student organization is an organization, operated by students at a university, whose membership normally consists only of students.
Student Organization
vivo:SubnationalRegion
Boroughs; townships; districts; the Midwest
Short definition was partially taken from http://en.wikipedia.org/wiki/Subnational_entity.
Smaller administrative division into which a country may be divided.
For example, the Midwest, northeast U.S.
Subnational Region
vivo:TeacherRole
A role of serving as an educator
Teacher Role
vivo:Team
VIVO Outreach Team; VIVO Ontology Team
A group of people working together.
An informal organization brought together for the purposes of a project or event
Team
vivo:Translation
The result of rendering a work from one language to another
Translation
vivo:UndergraduateAdvisingRelationship
An advisory relationship in which a professor advises an undergraduate student.
Undergraduate Advising Relationship
vivo:UndergraduateStudent
A person registered in an undergraduate program leading to a bachelor's degree or an undergraduate diploma or certificate.
Undergraduate Student
vivo:University
Definition taken from: http://en.wikipedia.org/wiki/University
University of Florida; Washington University in St. Louis
An institution of higher education and research, which grants academic degrees in a variety of subjects, and provides both undergraduate education and postgraduate education.
University
vivo:Video
Audiovisual recording in video format
Video
vivo:WorkingPaper
A document created as a basis for discussion or a very early draft of a formal paper
Working Paper
vivo:WorkshopSeries
Use workshop for individual events.
An organized series of workshop events, whether repetitions of the same workshop or multiple different workshops.
Workshop Series
scires:Phase0ClinicalTrial
Phase 0 Clinical Trial
Phase 0 is a recent designation for exploratory, first-in-human trials conducted in accordance with the United States Food and Drug Administration's (FDA) 2006 Guidance on Exploratory Investigational New Drug (IND) Studies. Phase 0 trials are also known as human microdosing studies and are designed to speed up the development of promising drugs or imaging agents by establishing very early on whether the drug or agent behaves in human subjects as was expected from preclinical studies.
Phase 0 Clinical Trial
scires:Phase1ClinicalTrial
In Phase I trials, researchers test an experimental drug or treatment in a small group of people (20-80) for the first time to evaluate its safety, determine a safe dosage range, and identify side effects
Phase 1 Clinical Trial
Phase 1 Clinical Trial
scires:Phase2ClinicalTrial
In Phase 2 trials, an experimental study drug or treatment is given to a larger group of people (100-300) to see if it is effective and to further evaluate its safety.
Phase 2 Clinical Trial
Phase 2 Clinical Trial
scires:Phase3ClinicalTrial
In Phase 3 trials, an experimental study drug or treatment is given to large groups of people (1,000-3,000) to confirm its effectiveness, monitor side effects, compare it to commonly used treatments, and collect information that will allow the experimental drug or treatment to be used safely.
Phase 3 Clinical Trial
Phase 3 Clinical Trial
scires:Phase4ClinicalTrial
In Phase 4 trials, post marketing studies delineate additional information including the drug's or treatment's risks, benefits, and optimal use.
Phase 4 Clinical Trial
Phase 4 Clinical Trial
owl:Thing
skos:Concept
Concept
vcard:Acquaintance
Acquaintance
1
1
1
1
1
vcard:Address
To specify the components of the delivery address for the vCard object
Address
1
1
1
1
vcard:Addressing
These types are concerned with information related to the delivery addressing or label for the vCard object
Addressing
vcard:Agent
Agent
1
1
vcard:Calendar
Calendar
1
vcard:CalendarBusy
To specify the URI for the busy time associated with the object that the vCard represents.
Was called FBURI in vCard
Calendar Busy
1
vcard:CalendarLink
To specify the URI for a calendar associated with the object represented by the vCard.
Was called CALURI in vCard.
Calendar Link
1
vcard:CalendarRequest
To specify the calendar user address [RFC5545] to which a scheduling request [RFC5546] should be sent for the object represented by the vCard.
Was called CALADRURI in vCard
Calendar Request
1
vcard:Category
To specify application category information about the vCard, also known as tags. This was called CATEGORIES in vCard.
Category
vcard:Cell
Also called mobile telephone
Cell
vcard:Child
Child
vcard:Code
Contains all the Code related Classes that are used to indicate vCard Types
Code
vcard:Colleague
Colleague
1
1
1
1
vcard:Communication
These properties describe information about how to communicate with the object the vCard represents
Communication
vcard:Contact
Contact
vcard:Coresident
Coresident
vcard:Coworker
Coworker
vcard:Crush
Crush
vcard:Date
Date
1
vcard:Email
To specify the electronic mail address for communication with the object the vCard represents
Email
vcard:Emergency
Emergency
1
1
1
1
vcard:Explanatory
These properties are concerned with additional explanations, such as that related to informational notes or revisions specific to the vCard
Explanatory
vcard:Fax
Fax
vcard:Female
Female
1
vcard:FormattedName
Specifies the formatted text corresponding to the name of the object the vCard represents
Formatted Name
vcard:Friend
Friend
vcard:Gender
Gender
1
vcard:Geo
Used to indicate global positioning information that is specific to an address
Geo
1
vcard:Geographical
These properties are concerned with information associated with geographical positions or regions associated with the object the vCard represents
Geographical
1
vcard:Group
Defines all the properties required to be a Group of Individuals or Organizations
Group
vcard:Home
This implies that the property is related to an individual's personal life
Home
1
1
1
1
vcard:Identification
These types are used to capture information associated with the identification and naming of the entity associated with the vCard
Identification
0
1
1
1
vcard:Individual
Defines all the properties required to be an Individual
Individual
1
vcard:InstantMessage
To specify the URI for instant messaging and presence protocol communications with the object the vCard represents.
Was called IMPP in vCard.
Messaging
1
vcard:Key
Key
vcard:Kin
Kin
0
0
1
0
0
0
0
vcard:Kind
The parent class for all vCard Objects
VCard Kind
1
vcard:Language
To specify the language(s) that may be used for contacting the entity associated with the vCard.
Language
vcard:Location
Defines all the properties required to be a Location
Location
1
vcard:Logo
To specify a graphic image of a logo associated with the object the vCard represents
Logo
vcard:Male
Male
vcard:Me
Me
vcard:Met
Met
vcard:Muse
Muse
0
1
1
0
0
vcard:Name
Specifies the components of the name of the object the vCard represents
Name
vcard:Neighbor
Neighbor
1
vcard:Nickname
Specifies the text corresponding to the nickname of the object the vCard represents
Nickname
vcard:None
None
1
vcard:Note
To specify supplemental information or a comment that is associated with the vCard
Note
vcard:Organization
Defines all the properties required to be an Organization
To specify the organizational name associated with the vCard
Organization
1
vcard:OrganizationName
Organization Name
1
vcard:OrganizationUnitName
Organizational Unit Name
1
1
1
1
vcard:Organizational
These properties are concerned with information associated with characteristics of the organization or organizational units of the object that the vCard represents
Organizational
vcard:Other
Other
vcard:Pager
Pager
vcard:Parent
Parent
1
vcard:Photo
Specifies an image or photograph information that annotates some aspect of the object the vCard represents
Photo
1
vcard:Related
To specify a relationship between another entity and the entity represented by this vCard
Related
vcard:RelatedType
Relation Type
vcard:Role
1
1
1
vcard:Security
Contains all the Security related Classes
Security
vcard:Sibling
Sibling
1
vcard:Sound
To specify a digital sound content information that annotates some aspect of the vCard. This property is often used to specify the proper pronunciation of the name property value of the vCard
Sound
vcard:Spouse
Spouse
vcard:Sweetheart
Sweetheart
1
vcard:Telephone
Telephone
vcard:TelephoneType
Telephone Type
vcard:Text
Also called sms telephone
Text
vcard:TextPhone
Text Phone
1
vcard:TimeZone
Used to indicate time zone information that is specific to a location or address
Time Zone
1
vcard:Title
To specify the position or job of the object the vCard represents
Title
vcard:Type
This is called TYPE in vCard but renamed here to Context for less confusion (with types/class)
Type
1
vcard:URL
To specify a uniform resource locator associated with the object to which the vCard refers. Examples for individuals include personal web sites, blogs, and social networking site identifiers.
URL
vcard:Unknown
Unknown
vcard:Video
Video
vcard:Voice
Voice
vcard:Work
This implies that the property is related to an individual's work place
Work
foaf:Agent
agent
see: http://xmlns.com/foaf/spec/#term_Agent
Agents are things that do stuff
Things that do stuff.
PERSON: Scott Hoffmann
An agent
Agent
Used to describe any "agent" related to bibliographic items. Such agents can be persons, organizations or groups of any kind.
foaf:Group
group
A group can also be an organization but need not be; typically used for looser associations of people or organizations acting together in some fashion, not necessarily through formal agreement or on a long-term basis. Added to the VIVO ontology to be able to support informal and perhaps even private groups of people around an idea, funding opportunity, or event.
see: http://xmlns.com/foaf/spec/#term_Group
A collection of individual agents (and may itself play the role of a Agent, ie. something that can perform actions).
A collection of individual agents.
PERSON: Scott Hoffmann
A group
Group
foaf:Organization
organization
Only use if no specific subclasses of foaf:organization desribe the organization.
This class will display all the instances in the subclasses below it, as well as any organizations that were added as part of this generic class because there wasn't a specific class available.
A generic class encompassing several types of organizations.
A kind of Agent corresponding to social instititutions such as companies, societies etc.
PERSON: Scott Hoffmann
An organization
Organization
Ued to describe an organization related to bibliographic items such as a publishing company, etc.
foaf:Person
person
An instance of a human being (Homo sapiens)
The most general classification of a person
PERSON: Melissa Haendel
A person
Person
count per year
Accepted for publication after peer reviewing
Accepted for publication after peer reviewing
accepted
draft
Peer review is the process by which articles are chosen to be included in a refereed journal. An editorial board consisting of experts in the same field as the author review the article and decide if it is authoritative enough for publication.
Peer review is the process by which articles are chosen to be included in a refereed journal. An editorial board consisting of experts in the same field as the author review the article and decide if it is authoritative enough for publication.
peer reviewed
Published document
Published document
published
rejected
unpublished
Document to be published
Document to be published
in press
invited
submitted
year-month-day value
yearMonthDayPrecision
year-month-day-time value
yearMonthDayTimePrecision
year-month value
yearMonthPrecision
year value
yearPrecision
Geopolitical Ontology
OBO Foundry
American Board of Allergy and Immunology
American Board of Anesthesiology
American Board of Colon and Rectal Surgery
American Board of Dermatology
American Board of Emergency Medicine
American Board of Family Medicine
American Board of Internal Medicine
American Board of Medical Genetics
American Board of Neurological Surgery
American Board of Nuclear Medicine
American Board of Obstetrics and Gynecology
American Board of Ophthalmology
American Board of Orthopaedic Surgery
American Board of Otolaryngology
American Board of Pathology
American Board of Pediatrics
American Board of Physical Medicine and Rehabilitation
American Board of Plastic Surgery
American Board of Preventive Medicine
American Board of Psychiatry and Neurology
American Board of Radiology
American Board of Surgery
American Board of Thoracic Surgery
American Board of Urology
uses software
Sequence analysis software.
Software used to perform the service.
PERSON: Melissa Haendel
PERSON: Melissa Haendel
Placeholder needs to be redesign
uses software
true
uncurated
This document is about information artifacts and their representations
is_about is a (currently) primitive relation that relates an information artifact to an entity.
7/6/2009 Alan Ruttenberg. Following discussion with Jonathan Rees, and introduction of "mentions" relation. Weaken the is_about relationship to be primitive.
We will try to build it back up by elaborating the various subproperties that are more precisely defined.
Some currently missing phenomena that should be considered "about" are predications - "The only person who knows the answer is sitting beside me" , Allegory, Satire, and other literary forms that can be topical without explicitly mentioning the topic.
person:Alan Ruttenberg
Smith, Ceusters, Ruttenberg, 2000 years of philosophy
is about
terms merged
derives from
Event Ontology
relation
OCRe research
OCRe study design
Bibontology
Citation Counting and Context Characterization Ontology
CiTO (Citation Typing Ontology)
FaBiO (FRBR-Aligned Bibliographic Ontology)
Vitro Public Ontology
Vitro internals
moniker (deprecated)
File
FileByteStream
VIVO-ISF Ontology version 1.6
VIVO Scientific Research Ontology
description
mismo que
same as
SKOS (Simple Knowledge Organization System)
VCard
has role
FOAF (Friend of a Friend)