format-version: 1.2 date: 29:04:2008 15:38 saved-by: Melissa Haendel auto-generated-by: OBO-Edit 1.101 synonymtypedef: PLURAL "PLURAL" default-namespace: zebrafish_anatomical_ontology [Term] id: ZFA:0000000 name: Brachet's cleft namespace: zebrafish_anatomy def: "The visible division between epiblast and hypoblast in the gastrula. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-404 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000001 name: Kupffer's vesicle namespace: zebrafish_anatomy def: "Small but distinctive epithelial sac containing fluid, located midventrally posterior to the yolk cell or its extension, and transiently present during most of the segmentation period. Kimmel et al, 1995. Kupffer's vesicle has been compared to the mouse embryonic node. Drummond et al, 2005." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-406 relationship: develops_from ZFA:0000023 ! forerunner cell group relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000077 ! tail bud relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000003 name: adaxial cell namespace: zebrafish_anatomy synonym: "adaxial cells" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-010921-408 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000279 ! segmental plate relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000004 name: anterior axial hypoblast namespace: zebrafish_anatomy synonym: "pre-polster" RELATED [ZFIN:ZDB-PUB-051019-5] xref: ZFIN:ZDB-ANAT-010921-409 relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0001378 ! axial hypoblast relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000005 name: artery namespace: zebrafish_anatomy synonym: "arterial system" RELATED [] xref: ZFIN:ZDB-ANAT-010921-411 is_a: ZFA:0001079 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000006 name: ball namespace: zebrafish_anatomy def: "The anterior round region of the yolk cell present after the yolk extension forms during the segmentation period. Kimmel et al, 1995." [ZFIN:curator] synonym: "yolk ball" RELATED [ZFIN:ZDB-PUB-961014-576] xref: ZFIN:ZDB-ANAT-010921-413 relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0000084 ! yolk relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000007 name: blood namespace: zebrafish_anatomy def: "A complex mixture of cells suspended in a liquid matrix that delivers nutrients to cells and removes wastes. (Source: BioGlossary, www.Biology-Text.com)" [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-414 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005023 ! hematopoietic system relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000008 name: brain namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-415 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001135 ! neural tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000009 name: cardiac ventricle namespace: zebrafish_anatomy def: "One of four heart chambers." [ZFIN:curator] synonym: "ventricle" RELATED [] xref: ZFIN:ZDB-ANAT-010921-416 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000010 name: cardiovascular system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-417 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000011 name: caudal artery namespace: zebrafish_anatomy def: "Extension of the dorsal aorta in the tail. Kimmel et al, 1995." [ZFIN:curator] synonym: "CA" RELATED [] xref: ZFIN:ZDB-ANAT-010921-418 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001073 ! axial vasculature relationship: part_of ZFA:0005037 ! tail vasculature relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000012 name: central nervous system namespace: zebrafish_anatomy def: "The brain and spinal cord. Kimmel et al, 1995." [ZFIN:curator] synonym: "cns" RELATED [] xref: ZFIN:ZDB-ANAT-010921-420 is_a: ZFA:0000396 ! nervous system relationship: develops_from ZFA:0000063 ! presumptive neural plate relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000013 name: cranial ganglion namespace: zebrafish_anatomy def: "Ganglion which is located in the head." [ZFIN:curator] synonym: "cranial ganglia" RELATED PLURAL [] synonym: "presumptive cranial ganglia" RELATED [] xref: ZFIN:ZDB-ANAT-010921-422 is_a: ZFA:0000190 ! ganglion relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000014 name: dorsal aorta namespace: zebrafish_anatomy def: "Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery. Kimmel et al, 1995." [ZFIN:curator] synonym: "DA" RELATED [] xref: ZFIN:ZDB-ANAT-010921-424 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005077 ! vascular cord relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001073 ! axial vasculature relationship: part_of ZFA:0005024 ! trunk vasculature relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000015 name: anatomical set namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061101-1 is_obsolete: true [Term] id: ZFA:0000016 name: ectoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-427 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0001376 ! presumptive ectoderm relationship: end ZFS:0000038 ! Larval:Day 6 relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000017 name: endoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-428 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0000416 ! presumptive endoderm relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000018 name: epiblast namespace: zebrafish_anatomy def: "The outer of the two layers of the blastoderm that form during gastrulation, corresponding to primitive ectoderm during gastrulation and to the definitive ectoderm after gastrulation. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-429 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0000111 ! germ ring relationship: start ZFS:0000018 ! Gastrula:Germ-ring [Term] id: ZFA:0000019 name: epiphysis namespace: zebrafish_anatomy def: "A circumscribed swelling, includes the pineal primordium that appears late in the segmentation period in the dorsal midline of the diencephalon. Kimmel et al, 1995." [ZFIN:curator] synonym: "pineal gland" RELATED [] xref: ZFIN:ZDB-ANAT-010921-430 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001127 ! visual system relationship: part_of ZFA:0001158 ! endocrine system relationship: part_of ZFA:0001359 ! pineal complex relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000020 name: extraembryonic structure namespace: zebrafish_anatomy def: "Anatomical structure that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo." [ZFIN:curator] xref: CARO:0000042 xref: ZFIN:ZDB-ANAT-010921-431 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0000022 name: floor plate namespace: zebrafish_anatomy synonym: "flexural organ" RELATED [] synonym: "floorplate" RELATED [] synonym: "fp" RELATED [] xref: ZFIN:ZDB-ANAT-010921-433 relationship: develops_from ZFA:0001218 ! presumptive floor plate relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000023 name: forerunner cell group namespace: zebrafish_anatomy def: "A group of cells that migrate at the leading edge of shield during gastrulation but do not involute. At the end of gastrulation, forerunner cells migrate deep into the embryo and organize to form Kuppfer's vesicle. Cooper and D'Amico, 1996." [ZFIN:curator] synonym: "DFCs" RELATED [] synonym: "dorsal forerunner cells" RELATED [] synonym: "forerunner cells" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-010921-434 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001126 ! noninvoluting endocytic marginal cell cluster relationship: end ZFS:0000023 ! Segmentation:1-4 somites relationship: start ZFS:0000017 ! Gastrula:50%-epiboly [Term] id: ZFA:0000024 name: retinal ganglion cell layer namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-435 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000026 name: hatching gland namespace: zebrafish_anatomy def: "A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland. Kimmel et al, 1995." [ZFIN:curator] synonym: "hgg" RELATED [] xref: ZFIN:ZDB-ANAT-010921-437 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000027 name: paired fin skeleton namespace: zebrafish_anatomy synonym: "appendicular skeleton" RELATED [] xref: ZFIN:ZDB-ANAT-060331-1 is_a: ZFA:0000434 ! skeletal system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000028 name: heart primordium namespace: zebrafish_anatomy def: "Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline between 21 and 26 somites to form the heart rudiment or cone. Stainier 2001." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-439 relationship: develops_from ZFA:0001065 ! lateral mesoderm relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: part_of ZFA:0000010 ! cardiovascular system relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000029 name: hindbrain namespace: zebrafish_anatomy def: "The most posterior of the three principal regions of the brain, forming the rhombencephalon and all or most of the metencephalon. Kimmel et al, 1995." [ZFIN:curator] synonym: "rhombencephalon" RELATED [] xref: ZFIN:ZDB-ANAT-010921-440 relationship: develops_from ZFA:0007043 ! hindbrain neural tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000030 name: macula utricle namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-441 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000168 ! anterior macula relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000700 ! utricle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000031 name: hypochord namespace: zebrafish_anatomy def: "A transient rod-like structure which is endodermally derived and located immediately ventral to the notochord. The hypochord is thought to play a role in positioning the dorsal aorta. Eriksson and Lofberg, 2000." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-442 relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0000017 ! endoderm relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000032 name: hypothalamus namespace: zebrafish_anatomy def: "A specialized brain region of the ventral diencephalon arising near the end of the segmentation period; the embryonic hypothalamic region will give rise to the posterior pituitary gland as well as a number of brain nuclei. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-443 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000033 name: intermediate cell mass of mesoderm namespace: zebrafish_anatomy synonym: "ICM" RELATED [] synonym: "intermediate cell mass of Oellacher" RELATED [] synonym: "posterior intermediate cell mass" RELATED [] xref: ZFIN:ZDB-ANAT-010921-444 relationship: develops_from ZFA:0000121 ! lateral plate mesoderm relationship: develops_from ZFA:0001201 ! ventral lateral mesoderm relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: part_of ZFA:0005023 ! hematopoietic system relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000034 name: lateral line system namespace: zebrafish_anatomy def: "A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "ll" RELATED [] xref: ZFIN:ZDB-ANAT-010921-445 is_a: ZFA:0000282 ! sensory system relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000142 ! peripheral nervous system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000035 name: lens namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-447 relationship: develops_from ZFA:0000122 ! lens placode relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000107 ! eye relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000036 name: liver and biliary system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-449 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000037 name: anatomical structure namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061101-2 is_a: ZFA:0100000 ! zebrafish anatomical entity relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0000038 name: margin namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-451 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000022 ! Gastrula:Bud relationship: start ZFS:0000016 ! Blastula:30%-epiboly [Term] id: ZFA:0000039 name: median axial vein namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-452 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000040 name: median fin fold namespace: zebrafish_anatomy synonym: "median fin" RELATED [] xref: ZFIN:ZDB-ANAT-010921-453 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000037 ! Larval:Day 5 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000041 name: mesoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-454 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0001377 ! presumptive mesoderm relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000042 name: midbrain hindbrain boundary namespace: zebrafish_anatomy synonym: "isthmus" RELATED [] synonym: "mhb" RELATED [] xref: ZFIN:ZDB-ANAT-010921-455 relationship: develops_from ZFA:0007047 ! midbrain hindbrain boundary neural tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000043 name: muscle pioneer somite 1 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 1" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-010921-456 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000963 ! slow muscle cell somite 1 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000044 name: myotome somite 14 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-457 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000726 ! somite 14 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000045 name: neural crest namespace: zebrafish_anatomy def: "A cell population arising from the dorsolateral aspect of the central nervous system primordium during the segmentation period, and later migrating along stereotyped pathways to give rise to a diverse and well-defined set of cell types including pigment cells, peripheral neurons and glia, and head cartilage. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-458 is_a: ZFA:0001120 ! neuroectoderm relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000046 name: retinal neural layer namespace: zebrafish_anatomy synonym: "neuroretina" RELATED [] xref: ZFIN:ZDB-ANAT-010921-459 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000152 ! retina relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000047 name: peripheral olfactory organ namespace: zebrafish_anatomy synonym: "nose" RELATED [] xref: ZFIN:ZDB-ANAT-010921-463 relationship: develops_from ZFA:0000048 ! olfactory placode relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001149 ! olfactory system relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000048 name: olfactory placode namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-464 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007062 ! olfactory field relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001149 ! olfactory system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000049 name: optic recess namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-465 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000079 ! telencephalon relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000050 name: optic vesicle namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-466 relationship: develops_from ZFA:0000570 ! optic primordium relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000107 ! eye relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000051 name: otic vesicle namespace: zebrafish_anatomy def: "Epithelial sac present beside the fifth rhombomere; forms the semicircular canals dorsally and the otolith organs ventrally, and houses the acoustico-vestibular sensory epithelia (maculae) of hair cells. Kimmel et al, 1995. (Also see Anatomical Atlas entry for ear by T. Whitfield.)" [ZFIN:curator] synonym: "otic capsule" RELATED [] synonym: "otocyst" RELATED [] synonym: "ov" RELATED [] xref: ZFIN:ZDB-ANAT-010921-468 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000138 ! otic placode relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000052 name: dorsal actinotrichium namespace: zebrafish_anatomy def: "Actinotrichium which is part of the dorsal fin fold." [ZFIN:curator] synonym: "dorsal actinotrichia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-060131-1 is_a: ZFA:0000089 ! actinotrichium relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000102 ! dorsal fin fold relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000053 name: presumptive segmental plate namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-470 relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0000041 ! mesoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000054 name: pericardial sac namespace: zebrafish_anatomy synonym: "pericardium" RELATED [] xref: ZFIN:ZDB-ANAT-010921-471 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000010 ! cardiovascular system relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000056 name: pharynx namespace: zebrafish_anatomy def: "Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-473 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000058 name: polster namespace: zebrafish_anatomy def: "The hatching gland rudiment at the time it underlies the forebrain during the early segmentation period. Kimmel et al, 1995." [ZFIN:curator] synonym: "pillow" RELATED [ZFIN:ZDB-PUB-961014-576] xref: ZFIN:ZDB-ANAT-010921-475 relationship: develops_from ZFA:0000004 ! anterior axial hypoblast relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000060 ! prechordal plate relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000059 name: postoptic commissure namespace: zebrafish_anatomy synonym: "post optic commissure" RELATED [] synonym: "post-optic commissure" RELATED [] xref: ZFIN:ZDB-ANAT-010921-476 is_a: ZFA:0000338 ! diencephalic tracts and commissures relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000060 name: prechordal plate namespace: zebrafish_anatomy def: "Axial hypoblast located anterior to the chorda mesoderm; the polster is its most anterior region. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-477 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001204 ! axial mesoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000062 name: presumptive forebrain namespace: zebrafish_anatomy synonym: "presumptive prosencephalon" RELATED [] xref: ZFIN:ZDB-ANAT-010921-479 relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate relationship: start ZFS:0000019 ! Gastrula:Shield [Term] id: ZFA:0000063 name: presumptive neural plate namespace: zebrafish_anatomy alt_id: ZFA:0000061 def: "Region of the gastrula which gives rise to the neural plate." [ZFIN:curator] synonym: "neurectoderm" RELATED [] synonym: "presumptive central nervous system" RELATED [] synonym: "prospective neuroectoderm" RELATED [] synonym: "prospective vegetal ectoderm" RELATED [] xref: ZFIN:ZDB-ANAT-010921-480 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000021 ! Gastrula:90%-epiboly relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0000064 name: presumptive pigmented epithelium namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-481 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000050 ! optic vesicle relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000066 name: proctodeum namespace: zebrafish_anatomy def: "An inward fold on the surface of the embryonic ectoderm that develops into part of the anal passage." [ZFIN:curator] synonym: "anus" RELATED [] xref: ZFIN:ZDB-ANAT-010921-484 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000067 name: pronephric mesoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-485 relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0001206 ! intermediate mesoderm relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000068 name: proneural cluster namespace: zebrafish_anatomy synonym: "proneural clusters" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-010921-486 relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000069 name: rhombomere 6 namespace: zebrafish_anatomy def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator] synonym: "r6" RELATED [] xref: ZFIN:ZDB-ANAT-010921-487 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001210 ! presumptive rhombomere 6 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000070 name: sensory axons peripheral namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-488 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000282 ! sensory system relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000071 name: shield namespace: zebrafish_anatomy synonym: "organizer" RELATED [] synonym: "Spemann Mangold organizer" RELATED [] synonym: "Spemann's organizer" RELATED [] xref: ZFIN:ZDB-ANAT-010921-489 relationship: end ZFS:0000019 ! Gastrula:Shield relationship: part_of ZFA:0000111 ! germ ring relationship: start ZFS:0000019 ! Gastrula:Shield [Term] id: ZFA:0000072 name: somite 1 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-490 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000073 name: somite 5 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-492 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000074 name: somite 26 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-493 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000075 name: spinal cord namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-494 relationship: develops_from ZFA:0007042 ! spinal cord neural tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000076 name: swim bladder namespace: zebrafish_anatomy def: "The swim bladder is a double-chambered organ located in the coelom and used to maintain buoyancy and may function as an acoustic resonator. The zebrafish does not appear to have a gas gland, but it is not yet clear if there are gas producing cells distrubuted more widely. Finney et al, 2006." [ZFIN:curator] synonym: "gas bladder" RELATED [] xref: ZFIN:ZDB-ANAT-010921-495 is_a: ZFA:0001490 ! cavitated compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000204 ! esophagus relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000077 name: tail bud namespace: zebrafish_anatomy synonym: "tailbud" RELATED [] xref: ZFIN:ZDB-ANAT-010921-496 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000078 name: ventral actinotrichium namespace: zebrafish_anatomy def: "Actinotrichium which is part of the ventral fin fold." [ZFIN:curator] synonym: "ventral actinotrichia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-060131-2 is_a: ZFA:0000089 ! actinotrichium relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001069 ! ventral fin fold relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000079 name: telencephalon namespace: zebrafish_anatomy def: "The anterior and dorsal forebrain neuromere, includes the olfactory bulb. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-498 relationship: develops_from ZFA:0000571 ! presumptive telencephalon relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000109 ! forebrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000080 name: trigeminal neural crest namespace: zebrafish_anatomy def: "Cranial neural crest which gives rise to the trigeminal ganglion." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-499 is_a: ZFA:0001194 ! cranial neural crest relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000081 name: trunk mesenchyme namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-500 is_a: ZFA:0000393 ! mesenchyme relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000082 name: vein namespace: zebrafish_anatomy synonym: "venous system" RELATED [] xref: ZFIN:ZDB-ANAT-010921-501 is_a: ZFA:0001079 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000083 name: ventral mesoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-502 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000041 ! mesoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000084 name: yolk namespace: zebrafish_anatomy def: "Nutrient store for embryonic development in the form of semicrystalline phospholipoprotein and contained within yolk granules. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-503 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000036 ! Larval:Day 4 relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0000085 name: apical ectodermal ridge pectoral fin bud namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-504 relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: part_of ZFA:0000141 ! pectoral fin bud relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000086 name: EVL namespace: zebrafish_anatomy def: "Outermost monolayer of cells surrounding the embryo that become very flattened in the blastula and give rise to the periderm. Sometimes used synonymously with periderm. Kimmel et al, 1995." [ZFIN:curator] synonym: "enveloping layer" RELATED [ZFIN:ZDB-PUB-961014-576] xref: ZFIN:ZDB-ANAT-010921-505 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001484 ! superficial blastomere relationship: end ZFS:0000021 ! Gastrula:90%-epiboly relationship: part_of ZFA:0001176 ! blastoderm relationship: start ZFS:0000016 ! Blastula:30%-epiboly [Term] id: ZFA:0000088 name: YSL namespace: zebrafish_anatomy def: "Peripheral layer of the yolk cell including nuclei and non-yolky cytoplasm. Kimmel et al, 1995." [ZFIN:curator] synonym: "periblast" RELATED [ZFIN:ZDB-PUB-961014-576] synonym: "yolk syncytial layer" RELATED [ZFIN:ZDB-PUB-961014-576] xref: ZFIN:ZDB-ANAT-010921-508 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000084 ! yolk relationship: develops_from ZFA:0000541 ! marginal blastomere relationship: end ZFS:0000037 ! Larval:Day 5 relationship: start ZFS:0000011 ! Blastula:1k-cell [Term] id: ZFA:0000089 name: actinotrichium namespace: zebrafish_anatomy def: "Portion of tissue which is a slender, horny, flexible, unsegmented fibril, which strengthens the embryonic fin fold. Actinotrichia are translucent, exhibit birefringence (double refraction) and are composed of the scleroprotein elastoidine. http://www.briancoad.com/Dictionary/A.htm" [ZFIN:curator] synonym: "actinotrichia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-060131-3 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000040 ! median fin fold relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000090 name: apical ectodermal ridge dorsal fin namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-511 relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001173 ! dorsal fin relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000091 name: axial chorda mesoderm namespace: zebrafish_anatomy alt_id: ZFA:0001219 synonym: "chordamesoderm" RELATED [] synonym: "presumptive notochord" RELATED [] xref: ZFIN:ZDB-ANAT-010921-512 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0001204 ! axial mesoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000092 name: axis namespace: zebrafish_anatomy synonym: "midline" RELATED [] xref: ZFIN:ZDB-ANAT-010921-513 is_a: ZFA:0001308 ! organism subdivision relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: start ZFS:0000017 ! Gastrula:50%-epiboly [Term] id: ZFA:0000093 name: blastomere namespace: zebrafish_anatomy def: "A cell arising during cleavage; the term encompasses the partially cleaved, incomplete cells at the blastodisc margin before they collectively form the yolk syncytial layer (YSL) in the midblastula. Kimmel et al, 1995." [ZFIN:curator] synonym: "blastomeres" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-010921-514 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000015 ! Blastula:Dome relationship: part_of ZFA:0001175 ! blastodisc relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0000094 name: blood island namespace: zebrafish_anatomy def: "Nests of developing blood cells arising late in the segmentation period from the intermediate mass, and located in the anterior-ventral tail, just posterior to the yolk extension. Kimmel et al, 1995." [ZFIN:curator] synonym: "blood islands" RELATED PLURAL [] synonym: "caudal hematopoietic tissue" RELATED [] synonym: "posterior blood island" RELATED [] synonym: "posterior ICM" RELATED [] xref: ZFIN:ZDB-ANAT-010921-515 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000033 ! intermediate cell mass of mesoderm relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000095 name: pharyngeal arch 3-7 skeleton namespace: zebrafish_anatomy def: "Skeletal and cartilagenous elements of the gill arches; the last five of the set of seven pharyngeal arches; the numbering system can be confusing; generally branchial arch #1 is the first gill arch, or the third pharyngeal arch, but some authors do not follow this convention. Kimmel et al, 1995." [ZFIN:curator] synonym: "branchial arches" RELATED [] synonym: "gill arches 1-5" RELATED [] synonym: "visceral arches 3-7" RELATED [] xref: ZFIN:ZDB-ANAT-010921-516 is_a: ZFA:0001216 ! splanchnocranium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000096 name: cardinal system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-517 is_a: ZFA:0001079 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000097 name: carotid artery namespace: zebrafish_anatomy def: "Artery originating at the junction of the first two aortic arches and supplying the anterior brain. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-518 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000098 name: proliferative region namespace: zebrafish_anatomy synonym: "cell cycle" RELATED [] synonym: "cell division" RELATED [] synonym: "proliferation" RELATED [] xref: ZFIN:ZDB-ANAT-010921-520 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000012 ! Blastula:High [Term] id: ZFA:0000099 name: brain vasculature namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-4 is_a: ZFA:0001267 ! cranial vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000100 name: cerebellum namespace: zebrafish_anatomy def: "Specialized brain region derived from the dorsal metencephalon (anterior hindbrain, and perhaps including posterior midbrain) and becoming distinctive late in the segmentation period. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-522 relationship: develops_from ZFA:0001442 ! upper rhombic lip relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000029 ! hindbrain relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000101 name: diencephalon namespace: zebrafish_anatomy def: "The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis). Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-524 relationship: develops_from ZFA:0000574 ! presumptive diencephalon relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000109 ! forebrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000102 name: dorsal fin fold namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-525 relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000040 ! median fin fold relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000103 name: embryo namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-528 is_obsolete: true [Term] id: ZFA:0000104 name: lateral cells namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-529 is_obsolete: true [Term] id: ZFA:0000105 name: epidermis namespace: zebrafish_anatomy def: "A cellular, multilayered epithelium derived from the ectoderm. Zebrafish epidermis consists only of living cells unlike terrestrial vertebrates in which dead, keratinized cells are present. Le Guellec et al, 2004." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-530 relationship: develops_from ZFA:0000016 ! ectoderm relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000106 name: extension namespace: zebrafish_anatomy def: "The posterior elongated region of the yolk cell that forms during the segmentation period. Kimmel et al, 1995." [ZFIN:curator] synonym: "yolk extension" RELATED [ZFIN:ZDB-PUB-961014-576] xref: ZFIN:ZDB-ANAT-010921-531 relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0000084 ! yolk relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000107 name: eye namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-532 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001114 ! head relationship: part_of ZFA:0001127 ! visual system relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000108 name: fin namespace: zebrafish_anatomy synonym: "fins" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-010921-533 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0001383 ! fin bud relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000109 name: forebrain namespace: zebrafish_anatomy def: "The most anterior region the brain including both the telencephalon and diencephalon. Kimmel et al, 1995." [ZFIN:curator] synonym: "prosencephalon" RELATED [] xref: ZFIN:ZDB-ANAT-010921-534 relationship: develops_from ZFA:0007041 ! forebrain neural tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000110 name: fourth ventricle namespace: zebrafish_anatomy def: "Fluid-filled brain cavity. Kimmel et al, 1995." [ZFIN:curator] synonym: "4th ventricle" RELATED [] synonym: "hindbrain ventricle" RELATED [] synonym: "rhombencephalic ventricle" RELATED [] synonym: "rhombencephalic vesicle" RELATED [] xref: ZFIN:ZDB-ANAT-010921-535 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0001261 ! ventricular system relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000111 name: germ ring namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-536 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000038 ! margin relationship: end ZFS:0000022 ! Gastrula:Bud relationship: start ZFS:0000018 ! Gastrula:Germ-ring [Term] id: ZFA:0000112 name: gut namespace: zebrafish_anatomy def: "The alimentary or digestive tract, and associated organs." [ZFIN:curator] synonym: "alimentary canal" RELATED [] synonym: "gut tube" RELATED [] xref: ZFIN:ZDB-ANAT-010921-537 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000113 name: head mesenchyme namespace: zebrafish_anatomy def: "Mesoderm that will give rise, along with cranial neural crest cells, to connective tissue, bone and musculature in the head. (Source: BioGlossary, www.Biology-Text.com)" [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-538 is_a: ZFA:0000393 ! mesenchyme relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000114 name: heart namespace: zebrafish_anatomy def: "Blood pumping organ composed of four chambers: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-539 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0000360 ! heart tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000115 name: heart rudiment namespace: zebrafish_anatomy def: "The migrating myocardial precursors of the heart rudiment form a cone like structure between 19.5hpf and 22hpf, and eventually telescope out into the primitive heart tube at 24hpf. Stainier 2001." [ZFIN:curator] synonym: "heart cone" RELATED [] synonym: "rudimentary heart" RELATED [] xref: ZFIN:ZDB-ANAT-010921-540 relationship: develops_from ZFA:0000028 ! heart primordium relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000116 name: macula lagena namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-541 is_a: ZFA:0000386 ! macula relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000374 ! lagena relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000117 name: hypoblast namespace: zebrafish_anatomy def: "The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm. Kimmel et al, 1995." [ZFIN:curator] synonym: "mesendoderm" RELATED [ZFIN:ZDB-PUB-961014-576] xref: ZFIN:ZDB-ANAT-010921-542 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0000111 ! germ ring relationship: start ZFS:0000018 ! Gastrula:Germ-ring [Term] id: ZFA:0000118 name: hypophysis namespace: zebrafish_anatomy def: "An endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin." [ZFIN:curator] synonym: "pituitary" RELATED [] xref: ZFIN:ZDB-ANAT-010921-543 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0001158 ! endocrine system relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000119 name: retinal inner nuclear layer namespace: zebrafish_anatomy synonym: "inner nuclear layer" RELATED PLURAL [] synonym: "intermediate cell layer" RELATED [] xref: ZFIN:ZDB-ANAT-010921-544 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000120 name: lateral line ganglion namespace: zebrafish_anatomy synonym: "lateral line ganglia" RELATED PLURAL [] synonym: "llg" RELATED [] xref: ZFIN:ZDB-ANAT-010921-546 is_a: ZFA:0000013 ! cranial ganglion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000034 ! lateral line system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000121 name: lateral plate mesoderm namespace: zebrafish_anatomy synonym: "lateral plate" RELATED [] xref: ZFIN:ZDB-ANAT-010921-547 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000041 ! mesoderm relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000122 name: lens placode namespace: zebrafish_anatomy def: "Ectodermal primordium of the lens of the eye. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-548 relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: part_of ZFA:0000016 ! ectoderm relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000123 name: liver namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-549 relationship: develops_from ZFA:0000124 ! liver primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000036 ! liver and biliary system relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0001159 ! immune system relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000124 name: liver primordium namespace: zebrafish_anatomy synonym: "liver bud" RELATED [] xref: ZFIN:ZDB-ANAT-010921-550 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000036 ! liver and biliary system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000125 name: mandibular lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the mandibular lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "neuromast mandibular" RELATED [] synonym: "neuromasts mandibular" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-010921-551 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000259 ! mandibular lateral line relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0000126 name: centrum namespace: zebrafish_anatomy def: "Centra are represented by mineralized, calcified, or ossified portions that surround the notochord. The autocentrum, present in Danio and all other living teleosts, is formed by direct ossification outside the elastica externa of the notochord (Arratia, 1999)." [ZFIN:curator] synonym: "autocentrum" RELATED [] xref: ZFIN:ZDB-ANAT-060331-2 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001189 ! vertebra relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0000127 name: mesenchyme condensations namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-554 is_obsolete: true [Term] id: ZFA:0000128 name: midbrain namespace: zebrafish_anatomy def: "The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally. Kimmel et al, 1995." [ZFIN:curator] synonym: "mesencephalon" RELATED [ZFIN:ZDB-PUB-961014-576] xref: ZFIN:ZDB-ANAT-010921-555 relationship: develops_from ZFA:0007039 ! midbrain neural tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000130 name: olfactory pit namespace: zebrafish_anatomy synonym: "nasal cavity" RELATED [] synonym: "nasal pit" RELATED [] synonym: "olfactory cavity" RELATED [] xref: ZFIN:ZDB-ANAT-010921-558 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000131 name: neural keel namespace: zebrafish_anatomy def: "An intermediate stage (between the neural plate and neural rod) during the early segmentation period in the morphogenesis of the central nervous system primordium; the keel is roughly triangular shaped in cross section. Kimmel et al, 1995." [ZFIN:curator] synonym: "presumptive central nervous system" RELATED [] xref: ZFIN:ZDB-ANAT-010921-559 is_a: ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0000132 ! neural plate relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000132 name: neural plate namespace: zebrafish_anatomy def: "The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995." [ZFIN:curator] synonym: "presumptive central nervous system" RELATED [] xref: ZFIN:ZDB-ANAT-010921-560 is_a: ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0000063 ! presumptive neural plate relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000133 name: neural rod namespace: zebrafish_anatomy def: "An intermediate stage in the development of the central nervous system present during the segmentation period; the neural rod is roughly cylindrical in shape, forms from the neural keel, and is not yet hollowed out into the neural tube. Kimmel et al, 1995." [ZFIN:curator] synonym: "presumptive central nervous system" RELATED [] xref: ZFIN:ZDB-ANAT-010921-561 is_a: ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0000131 ! neural keel relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000135 name: notochord namespace: zebrafish_anatomy def: "Rod-like principal supportive element of the embryo and larva, present in the midline just ventral to the neural tube, and differentiating during the segmentation period to form large vacuolated epithelial cells and a surrounding a sheath of fibrous and elastic layers. Layering of the sheath may differ in structure, thickness and development among groups; in cypriniforms there are actually three very thin layers to the sheath. A functional, well developed notochord is present throughout life in certain basal fish groups but not in cypriniforms. Kimmel et al, 1995." [ZFIN:curator] synonym: "notocord" RELATED [] xref: ZFIN:ZDB-ANAT-010921-564 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000091 ! axial chorda mesoderm relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: part_of ZFA:0001414 ! occipital region relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000136 name: otic lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the otic lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "neuromast otic" RELATED [] synonym: "neuromasts otic" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-010921-565 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000464 ! otic lateral line relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0000137 name: optic stalk namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-566 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000138 name: otic placode namespace: zebrafish_anatomy def: "Primordium of the ear epithelium before it hollows into the otic vesicle, present beside the hindbrain rudiment in the midsegmentation period. Kimmel et al, 1995. (Also see Anatomical Atlas entry for ear by T. Whitfield.)" [ZFIN:curator] synonym: "otic capsule" RELATED [] synonym: "otocyst" RELATED [] xref: ZFIN:ZDB-ANAT-010921-568 is_a: ZFA:0001310 ! dorsolateral placode relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0001138 ! vestibuloauditory system relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000140 name: pancreas namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-570 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0001390 ! pancreatic bud relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001371 ! pancreatic system relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000141 name: pectoral fin bud namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-571 is_a: ZFA:0001383 ! fin bud relationship: develops_from ZFA:0001453 ! pectoral fin field relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000142 name: peripheral nervous system namespace: zebrafish_anatomy def: "Nervous structures including ganglia outside of the central nervous system. Kimmel et al, 1995." [ZFIN:curator] synonym: "pns" RELATED [] xref: ZFIN:ZDB-ANAT-010921-572 is_a: ZFA:0000396 ! nervous system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000143 name: retinal photoreceptor layer namespace: zebrafish_anatomy def: "The layer within the retina where the photoreceptor cell receptor segments reside." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-574 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000144 name: retinal pigmented epithelium namespace: zebrafish_anatomy def: "A monolayer of pigmented epithelium covering the neural retina; develops from the outer of the two layers of the optic cup. Kimmel et al, 1995." [ZFIN:curator] synonym: "pigmented epithelium" RELATED [] synonym: "pigmented retinal epithelium" RELATED [] synonym: "PRE" RELATED [] synonym: "RPE" RELATED [] xref: ZFIN:ZDB-ANAT-010921-575 relationship: develops_from ZFA:0000064 ! presumptive pigmented epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000152 ! retina relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000145 name: CNS tracts and commissures namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-5 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000146 name: presumptive brain namespace: zebrafish_anatomy synonym: "brain rudiment" RELATED [] xref: ZFIN:ZDB-ANAT-010921-578 relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0000148 name: presumptive midbrain namespace: zebrafish_anatomy synonym: "presumptive mesencephalon" RELATED [] xref: ZFIN:ZDB-ANAT-010921-580 relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate relationship: start ZFS:0000019 ! Gastrula:Shield [Term] id: ZFA:0000149 name: primitive heart tube namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-583 relationship: develops_from ZFA:0000115 ! heart rudiment relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000150 name: pronephric duct namespace: zebrafish_anatomy def: "Duct of the embryonic kidney, present bilaterally ventral to the somites and leading to the cloacal chamber. Kimmel et al, 1995. Wingert et al have suggested that the pronephric duct as described traditionally may consist of subregions which are analogous to portions of the tubule segment of mammalian and other fish nephrons. Wingert, 2007." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-585 relationship: develops_from ZFA:0000067 ! pronephric mesoderm relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000151 ! pronephros relationship: part_of ZFA:0000163 ! renal system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000151 name: pronephros namespace: zebrafish_anatomy def: "The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.Kimmel et al, 1995." [ZFIN:curator] synonym: "embryonic kidney" RELATED [ZFIN:ZDB-PUB-961014-576] xref: ZFIN:ZDB-ANAT-010921-586 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000067 ! pronephric mesoderm relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000163 ! renal system relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000152 name: retina namespace: zebrafish_anatomy def: "The portion of the eye developing from the optic primordium and including the neural retina and the retinal pigment layer. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-587 relationship: develops_from ZFA:0001071 ! presumptive retina relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001202 ! optic cup relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000153 name: rhombomere 8 namespace: zebrafish_anatomy def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator] synonym: "r8" RELATED [] xref: ZFIN:ZDB-ANAT-010921-588 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001214 ! presumptive rhombomere 8 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000154 name: sinus venosus namespace: zebrafish_anatomy def: "Heart region collecting blood from the paired common cardinal veins and delivering to the atrium. One of four heart chambers, the sinus venosus also acts as a pacemaker and is the first to contract. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-590 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000155 name: somite namespace: zebrafish_anatomy def: "Undifferentiated mesodermal components of early trunk or tail segments or metameres, derived from paraxial mesoderm; forms myotomes, sclerotomes and perhaps dermatomes. Kimmel et al, 1995." [ZFIN:curator] synonym: "somitic mesoderm" RELATED [] xref: ZFIN:ZDB-ANAT-010921-591 relationship: develops_from ZFA:0000279 ! segmental plate relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001115 ! trunk relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000156 name: somite 20 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-593 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000157 name: somite 30 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-594 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000158 name: urostyle namespace: zebrafish_anatomy def: "This centrum may be formed via the fusion of the terminal centrum and half-centrum. It is sometimes termed the 'ultimate' vertebra. Mabee and Bird, 2001." [ZFIN:curator] synonym: "compound centrum" RELATED [] synonym: "last vertebra" RELATED [] synonym: "ultimate vertebra" RELATED [] xref: ZFIN:ZDB-ANAT-010921-596 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001581 ! ural centrum 2 relationship: develops_from ZFA:0001583 ! preural centrum 1+ ural centrum 1 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000159 name: tectal ventricle namespace: zebrafish_anatomy synonym: "cerebral aquaduct" RELATED [] synonym: "medial tectal ventricle" RELATED [] synonym: "mesencephalic ventricle" RELATED [] synonym: "mesencephalic vesicle" RELATED [] synonym: "midbrain ventricle" RELATED [] xref: ZFIN:ZDB-ANAT-010921-597 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000128 ! midbrain relationship: part_of ZFA:0001261 ! ventricular system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000160 name: tegmentum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-598 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001354 ! mesencephalic tegmentum relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000161 name: third ventricle namespace: zebrafish_anatomy def: "Fluid-filled brain cavity. Kimmel et al, 1995." [ZFIN:curator] synonym: "3rd ventricle" RELATED [] synonym: "diencephalic ventricle" RELATED [] synonym: "diencephalic vesicle" RELATED [] xref: ZFIN:ZDB-ANAT-010921-599 relationship: develops_from ZFA:0001259 ! forebrain ventricle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0001261 ! ventricular system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000162 name: trigeminal placode namespace: zebrafish_anatomy def: "The ectodermal rudiment of the trigeminal ganglion, distinguishable during much of the segmentation period. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-010921-600 is_a: ZFA:0001310 ! dorsolateral placode relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000163 name: renal system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-601 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000164 name: ventral mesenchyme namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-010921-602 is_a: ZFA:0000393 ! mesenchyme relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000165 name: inferior lobe namespace: zebrafish_anatomy synonym: "inferior lobes" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-1 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000347 ! dorsal zone relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000166 name: lateral crista namespace: zebrafish_anatomy alt_id: ZFA:0000378 def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator] synonym: "lateral crista ampullaris" RELATED [] synonym: "lateral cristae" RELATED PLURAL [] synonym: "lc" RELATED [] synonym: "sensory patch" RELATED [] synonym: "sensory patches" RELATED [] xref: ZFIN:ZDB-ANAT-011113-10 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000220 ! lateral semicircular canal relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0000167 name: anal fin skeleton namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-100 is_a: ZFA:0001123 ! axial fin skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001162 ! anal fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000168 name: anterior macula namespace: zebrafish_anatomy def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator] synonym: "am" RELATED [] synonym: "sensory patch" RELATED [] xref: ZFIN:ZDB-ANAT-011113-101 is_a: ZFA:0000386 ! macula relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000169 name: antorbital namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-102 is_obsolete: true [Term] id: ZFA:0000170 name: basibranchial namespace: zebrafish_anatomy def: "Median elements that are ossified within copulae and are not assigned to a specific branchial arch number. They articulate posterolaterally with the hypobranchials." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-104 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001220 ! copula relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000171 name: basisphenoid namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-105 is_obsolete: true [Term] id: ZFA:0000172 name: branchial muscle namespace: zebrafish_anatomy synonym: "branchial muscles" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-106 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001307 ! pharyngeal musculature relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000173 name: bulbus arteriosus namespace: zebrafish_anatomy def: "A pear shaped chamber that functions as a capacitor, maintaining continuous blood flow into the gill arches. The bulbus arteriosus has three distinct layers. Hu et al. 2000." [ZFIN:curator] synonym: "outflow tract" RELATED [] synonym: "truncus" RELATED [] xref: ZFIN:ZDB-ANAT-011113-107 relationship: develops_from ZFA:0000818 ! vagal neural crest relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000174 name: caudal cerebellar tract namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-108 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000175 name: posterior lateral line nerve namespace: zebrafish_anatomy def: "Cranial nerve which enters the brain between cranial nerves VIII and IX; contains afferents and sensory efferents to the posterior lateral line ganglion and middle ganglion. Fibers from the posterior lateral line ganglion innervate the occipital dorsal lateral line and trunk lateral lines." [ZFIN:curator] synonym: "caudal lateral line nerve" RELATED [] xref: ZFIN:ZDB-ANAT-011113-109 is_a: ZFA:0000641 ! cranial nerve is_a: ZFA:0001479 ! lateral line nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001471 ! posterior lateral line system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000176 name: lateral entopeduncular nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-11 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000304 ! ventral telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000177 name: caudal oblique namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-110 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000172 ! branchial muscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000178 name: caudal peduncle namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-111 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000179 name: caudal root of abducens nerve namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-112 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000180 name: caudal vein namespace: zebrafish_anatomy def: "Vein in the tail returning blood from the trunk and tail to the heart, leads directly into the posterial cardinal vein in the posterior trunk. Kimmel et al, 1995." [ZFIN:curator] synonym: "CV" RELATED [] xref: ZFIN:ZDB-ANAT-011113-113 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0001286 ! caudal vein plexus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001073 ! axial vasculature relationship: part_of ZFA:0005037 ! tail vasculature relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000181 name: caudal zone of D namespace: zebrafish_anatomy synonym: "posterior zone of dorsal telencephalic area" RELATED [] xref: ZFIN:ZDB-ANAT-011113-114 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000505 ! dorsal telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000182 name: central caudal thalamic nucleus namespace: zebrafish_anatomy synonym: "central posterior thalamic nucleus" RELATED [] xref: ZFIN:ZDB-ANAT-011113-115 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000653 ! dorsal thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000183 name: central pretectum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-116 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000418 ! pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000184 name: cleithrum namespace: zebrafish_anatomy def: "Transversely oriented bone connecting the occipital region of the skull dorsally and pectoral girdle ventrally; appears near the end of embryogenesis. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-117 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000407 ! pectoral girdle relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000185 name: commissura rostral, pars ventralis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-118 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001108 ! anterior commissure relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000186 name: common cardinal vein namespace: zebrafish_anatomy def: "Bilaterally paired longitudinal vein; the anterior cardinal returns blood from the head, and the posterior cardinal returns it from the trunk; these two vessels join together on each side as the common cardinal vein (duct of Cuvier; misnamed the vitelline vein) that leads across the yolk cell to the heart's sinus venosus. Kimmel et al, 1995." [ZFIN:curator] synonym: "duct of Cuvier" RELATED [] xref: ZFIN:ZDB-ANAT-011113-119 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000096 ! cardinal system relationship: part_of ZFA:0005024 ! trunk vasculature relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000187 name: lateral granular eminence namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-12 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000307 ! vestibulolateralis lobe relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000188 name: corpus cerebelli namespace: zebrafish_anatomy synonym: "cerebellar corpus" RELATED [] xref: ZFIN:ZDB-ANAT-011113-120 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000100 ! cerebellum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000189 name: otic region namespace: zebrafish_anatomy synonym: "cranial vault" RELATED [] xref: ZFIN:ZDB-ANAT-011113-121 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000190 name: ganglion namespace: zebrafish_anatomy def: "Structures containing a collection of nerve cell bodies. (Source: BioGlossary, www.Biology-Text.com)" [ZFIN:curator] synonym: "ganglia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-122 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000142 ! peripheral nervous system relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000191 name: dentary namespace: zebrafish_anatomy def: "The dentary is a dermal bone that forms the antero-lateral part of the lower jaw. It first appears around the anterior end of Meckel's cartilage (5.1 mm NL). In the adult, the dentary meets its counterpart anteriorly at the mandibular symphysis. The dentary abuts the retroarticular posteriorly, and it surround the anguloarticular. The dentary is connected to the maxilla by the maxillo-mandibular ligament. Dentary teeth are absent in cypriniforms, but are present in other ostariophysans." [ZFIN:curator] synonym: "dentary bone" RELATED [] xref: ZFIN:ZDB-ANAT-011113-123 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001273 ! ventral mandibular arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000192 name: descending trigeminal root namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-124 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000193 name: diffuse nuclei namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-125 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000165 ! inferior lobe relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000194 name: dorsal accessory optic nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-126 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000183 ! central pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000195 name: dorsal depressor namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-127 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000648 ! dorsal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000196 name: dorsal hypohyal namespace: zebrafish_anatomy def: "The dorsal hypohyal is a small cartilage replacement bone ossifying from the anterodorsal ceratohyal cartilage. Ossification begins on the medial surface of the ceratohyal cartilage at a ligamentous connection to basibranchial 1 (6.8 mm)." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-128 is_a: ZFA:0001381 ! hypohyal relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000197 name: dorsal nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-129 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000213 ! habenula relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000199 name: dorsal periventricular hypothalamus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-130 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000347 ! dorsal zone relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000200 name: dorsal root ganglion namespace: zebrafish_anatomy def: "Trunk ganglion which is located adjacent to the spine on a dorsal root and contains the cell bodies of afferent sensory nerves." [ZFIN:curator] synonym: "dorsal root ganglia" RELATED [] synonym: "DRG" RELATED [] xref: ZFIN:ZDB-ANAT-011113-131 is_a: ZFA:0001573 ! trunk ganglion relationship: develops_from ZFA:0001024 ! trunk neural crest relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000201 name: dorsal transverse namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-132 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000172 ! branchial muscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000202 name: efferent branchial artery namespace: zebrafish_anatomy synonym: "EBA" RELATED [] xref: ZFIN:ZDB-ANAT-011113-133 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000354 ! gill relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000203 name: epicentrals namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-134 is_obsolete: true [Term] id: ZFA:0000204 name: esophagus namespace: zebrafish_anatomy synonym: "oesophagus" RELATED [] xref: ZFIN:ZDB-ANAT-011113-135 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000205 name: external ventral flexor namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-136 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000628 ! caudal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000206 name: facial nerve motor nucleus namespace: zebrafish_anatomy synonym: "motor nucleus VII" RELATED [] synonym: "nVII" RELATED [] xref: ZFIN:ZDB-ANAT-011113-137 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000207 name: fin musculature namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-138 is_a: ZFA:0000548 ! musculature system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000208 name: gall bladder namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-139 is_a: ZFA:0000496 ! compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000209 name: lateral preglomerular nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-14 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000210 name: gigantocellular part of magnocellular preoptic nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-140 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000470 ! preoptic area relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000211 name: gill lamella namespace: zebrafish_anatomy synonym: "gill lamellae" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-141 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000354 ! gill relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000212 name: granular eminence namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-142 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000100 ! cerebellum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000213 name: habenula namespace: zebrafish_anatomy def: "The habenula relays impulses from limbic areas of the telencephalon to an unpaired midbrain nucleus, the interpeduncular nucleus." [ZFIN:curator] synonym: "habenulae" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-143 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000509 ! epithalamus relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000214 name: hypobranchial vessel namespace: zebrafish_anatomy synonym: "hypobranchial vessels" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-144 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000215 name: inferior olive namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-145 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000216 name: infracarinalis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-146 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000473 ! trunk musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000217 name: inner ear namespace: zebrafish_anatomy def: "The auditory (hearing) and vestibular (balance) organ of the fish, equivalent to the inner ear of amniotes. (See Anatomical Atlas entry for ear by T. Whitfield.)" [ZFIN:curator] synonym: "ear" RELATED [] synonym: "otic capsule" RELATED [] synonym: "otocyst" RELATED [] xref: ZFIN:ZDB-ANAT-011113-147 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0000051 ! otic vesicle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001138 ! vestibuloauditory system relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000219 name: intermediate reticular formation namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-149 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000542 ! medial column relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000220 name: lateral semicircular canal namespace: zebrafish_anatomy alt_id: ZFA:0000361 def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)" [ZFIN:curator] synonym: "horizontal semicircular canal" RELATED [] synonym: "lateral semicircular canals" RELATED [] synonym: "lateral semicircular duct" RELATED [] xref: ZFIN:ZDB-ANAT-011113-15 relationship: develops_from ZFA:0000232 ! lateral semicircular canal primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000431 ! semicircular canal relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000221 name: internal levator namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-150 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000172 ! branchial muscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000222 name: isthmic primary nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-152 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000433 ! sensory trigeminal nuclei relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000223 name: infraorbital 1 namespace: zebrafish_anatomy def: "Dermal bone that covers the region between the anterior margin of the eye and the upper jaw. Infraorbital 1 (the lachrymal) is the first and largest bone in the infraorbital series. Bears the anterior most part of the infraorbital canal." [ZFIN:curator] synonym: "lachrymal bone" RELATED [] synonym: "lacrimal" RELATED [] synonym: "lacrymal bone" RELATED [] xref: ZFIN:ZDB-ANAT-011113-153 is_a: ZFA:0000376 ! infraorbital relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000224 name: larva namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-154 is_obsolete: true [Term] id: ZFA:0000225 name: lateral crista primordium namespace: zebrafish_anatomy synonym: "lateral crista primordia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-155 relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0000220 ! lateral semicircular canal relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000226 name: lateral ethmoid namespace: zebrafish_anatomy def: "Large, paired cartilage bones separating the olfactory region from the orbit. Arises from both perichondral and endochondral ossifications (Harrington 1955). Bordered by the mesethmoid anteriorly and overlain by the frontal dorsally, each lateral ethmoid extends medially to meet its fellow posteriorly along the midline. Develops from the laminae orbitonasales." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-156 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001503 ! lamina orbitonasalis relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000351 ! olfactory region relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000227 name: lateral hypothalamic nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-157 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000707 ! ventral zone relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000228 name: lateral line primordium namespace: zebrafish_anatomy synonym: "lateral line primordia" RELATED PLURAL [] synonym: "llp" RELATED [] xref: ZFIN:ZDB-ANAT-011113-158 relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0000034 ! lateral line system relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000229 name: lateral olfactory tract namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-159 is_a: ZFA:0000597 ! telencephalic tracts relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000230 name: longitudinal hypochordal namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-16 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000628 ! caudal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000231 name: lateral recess namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-160 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000161 ! third ventricle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000232 name: lateral semicircular canal primordium namespace: zebrafish_anatomy synonym: "lateral semicircular canal primordia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-161 relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: part_of ZFA:0000431 ! semicircular canal relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000233 name: lower oral valve namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-162 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000695 ! labial cavities relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000234 name: macula neglecta namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-163 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000559 ! otolith organ relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000235 name: magnocellular superficial pretectal nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-164 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000687 ! superficial pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000236 name: mandibular muscle namespace: zebrafish_anatomy synonym: "mandibular muscles" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-165 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001307 ! pharyngeal musculature relationship: part_of ZFA:0001612 ! pharyngeal arch 1 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000237 name: medial forebrain bundle diencephalon namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-167 is_a: ZFA:0000338 ! diencephalic tracts and commissures relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005111 ! medial forebrain bundle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000238 name: medial olfactory tract namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-168 is_a: ZFA:0000597 ! telencephalic tracts relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000239 name: mesocoracoid bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-171 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001537 ! mesocorocoid cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000407 ! pectoral girdle relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000240 name: metapterygoid namespace: zebrafish_anatomy def: "The metapterygoid is a posterior bone that ossifies in the cartilaginous palatoquadrate arch. It first appears as a rod of bone with an anterodorsally projecting process from the middle of the dorsal surface (6.4 mm). The adult metapterygoid is roughly rectangular in shape with rounded corners and an anterodorsally projecting spine that meets the entopterygoid medially in a synostosis at its posteromedial edge. The posterior end curves dorsally to form the posteroventral surface of the orbit." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-172 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000241 name: midline column namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-173 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000421 ! reticular formation relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000242 name: male organism namespace: zebrafish_anatomy def: "Gonochoristic organism that can produce male gametes." [ZFIN:curator] xref: CARO:0000027 xref: ZFIN:ZDB-ANAT-061101-3 is_a: ZFA:0001094 ! whole organism relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0000243 name: neuromast namespace: zebrafish_anatomy def: "Volcano-shaped lateral line sensory organ located in characteristic positions within the skin epithelium and containing hair cells and their support elements. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "lateral line neuromast" RELATED [] synonym: "neuromasts" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-175 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000034 ! lateral line system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000244 name: nucleus Edinger-Westphal namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-176 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000245 name: nucleus of the descending root namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-177 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000433 ! sensory trigeminal nuclei relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000246 name: nucleus taeniae namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-178 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000505 ! dorsal telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000247 name: cranial nerve VIII namespace: zebrafish_anatomy synonym: "auditory nerve" RELATED [] synonym: "CN-VIII" RELATED [] synonym: "octaval nerve" RELATED [] synonym: "statoacoustic nerve" RELATED [] xref: ZFIN:ZDB-ANAT-011113-179 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000248 name: magnocellular preoptic nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-18 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000470 ! preoptic area relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000249 name: cranial nerve I namespace: zebrafish_anatomy synonym: "CN-I" RELATED [] synonym: "olfactory nerve" RELATED [] xref: ZFIN:ZDB-ANAT-011113-180 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001149 ! olfactory system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000250 name: opercle namespace: zebrafish_anatomy synonym: "opercles" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-181 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000251 name: opercular-branchiostegal series namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-182 is_obsolete: true [Term] id: ZFA:0000252 name: optic tract namespace: zebrafish_anatomy def: "Axon tract which is comprised of retinal ganglion cell axons after which they have passed through the optic chiasm." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-183 is_a: ZFA:0000338 ! diencephalic tracts and commissures relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000253 name: orbitosphenoid namespace: zebrafish_anatomy def: "Large median unpaired cartilage bone consisting of two diverging plates. Positioned medial to the eye. The orbitosphenoid develops from the Trabeculae communis and forms the anterior and anterolateral boundary of the orbital foramen and constitutes a significant part of the sidewalls and floor of the cranial cavity. Bordered by the lateral ethmoid anteriorly, and the pterosphenoid posteriorly, The orbitosphenoid may extend ventrally to meet the parasphenoid. In the adult, the orbitosphenoid is fused ventrally to the parasphenoid via a thin sheet of bone." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-184 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001505 ! taenia marginalis anterior relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000254 name: pancreas primordium namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-185 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001371 ! pancreatic system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000255 name: paraxial mesoderm namespace: zebrafish_anatomy alt_id: ZFA:0000942 def: "Mesoderm which is lateral to the neural tube on both sides." [ZFIN:curator] synonym: "paraxial mesenchyme" RELATED [] xref: ZFIN:ZDB-ANAT-011113-186 is_a: ZFA:0000081 ! trunk mesenchyme relationship: develops_from ZFA:0000591 ! presumptive paraxial mesoderm relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000041 ! mesoderm relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000256 name: pars subcommissuralis of V namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-187 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000304 ! ventral telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000257 name: pectoral fin cartilage namespace: zebrafish_anatomy def: "Cartilage which is part of the pectoral fin." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-188 is_a: ZFA:0001543 ! paired fin cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000258 name: pelvic fin musculature namespace: zebrafish_anatomy synonym: "pelvic fins" RELATED [] xref: ZFIN:ZDB-ANAT-011113-189 is_a: ZFA:0000207 ! fin musculature relationship: develops_from ZFA:0001449 ! mesenchyme pelvic fin relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001184 ! pelvic fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000259 name: mandibular lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-19 is_a: ZFA:0001469 ! lateral line relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000260 name: periventricular nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-190 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000707 ! ventral zone relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000261 name: pharyngohyoid namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-191 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000172 ! branchial muscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000262 name: posterior semicircular canal namespace: zebrafish_anatomy alt_id: ZFA:0000483 def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)" [ZFIN:curator] synonym: "caudal vertical semicircular canal" RELATED [] synonym: "posterior semicircular canals" RELATED [] synonym: "posterior semicircular duct" RELATED [] xref: ZFIN:ZDB-ANAT-011113-192 relationship: develops_from ZFA:0000412 ! posterior semicircular canal primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000431 ! semicircular canal relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000263 name: precaudal vertebra namespace: zebrafish_anatomy def: "Post-Weberian vertebrae lacking hemal spines (Weitzman, 1962), refers generally to the anterior vertebral region bounding the abdominal cavity. Alternate but not quite synonymous terms are abdominal or trunk vertebrae, which bear parapophyses and ribs. In many actinopterygians dorsal to the posterior abdominal cavity there are transitional vertebrae lacking ribs but also without hemal spines or sometimes even enclosed hemal arches. The primary definition would identify these vertebrae as precaudal. Bird and Mabee, 2003." [ZFIN:curator] synonym: "abdominal vertebrae" RELATED [] synonym: "precaudal vertebrae" RELATED PLURAL [] synonym: "trunk vertebrae" RELATED [] xref: ZFIN:ZDB-ANAT-011113-193 is_a: ZFA:0001189 ! vertebra relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001115 ! trunk relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000264 name: preopercle namespace: zebrafish_anatomy synonym: "preopercles" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-194 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000265 name: presumptive dorsal mesoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-195 relationship: end ZFS:0000019 ! Gastrula:Shield relationship: part_of ZFA:0001377 ! presumptive mesoderm relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0000266 name: pretecto-mamillary tract namespace: zebrafish_anatomy synonym: "pretectomamillary tract" RELATED [] xref: ZFIN:ZDB-ANAT-011113-196 is_a: ZFA:0000338 ! diencephalic tracts and commissures relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000267 name: primary olfactory fiber layer namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-197 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000402 ! olfactory bulb relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000268 name: anal fin proximal radial namespace: zebrafish_anatomy def: "Rod-like internal median skeletal support bones of the anal fin, which articulate with the distal radials." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-199 is_a: ZFA:0001646 ! anal fin radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001420 ! anal fin pterygiophore relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000269 name: inferior ventral flexor namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-2 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000628 ! caudal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000270 name: maxilla namespace: zebrafish_anatomy def: "The dermal maxilla forms part of the upper jaw. It is first visible as a small dorsoventrally oriented rod of bone in the lateral region of the upper jaw. Through anterior ossification it becomes S-shaped, with its anteriormost tip directed medially (4.8 mm NL). The posteroventral end of the maxilla is connected to the dentary by a ligament. Maxillary teeth are absent in cypriniforms, but are present in other ostariophysans. . Two barbels are present on the maxilla. The presence of two pairs of maxillary barbels is considered by Cavender and Coburn (1992) to be the primitive condition for the Cyprinidae." [ZFIN:curator] synonym: "maxillae" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-20 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000271 name: radial namespace: zebrafish_anatomy synonym: "radials" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-200 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000272 name: respiratory system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-201 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000274 name: rostral octaval nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-204 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000401 ! octaval nerve sensory nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000275 name: rostral tegmental nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-205 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000276 name: rostrolateral thalamic nucleus of Butler & Saidel namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-206 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000458 ! ventral thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000277 name: scale namespace: zebrafish_anatomy synonym: "scales" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-207 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001183 ! dermal superficial region relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0000278 name: secondary gustatory nucleus medulla oblongata namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-208 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000279 name: segmental plate namespace: zebrafish_anatomy def: "Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995." [ZFIN:curator] synonym: "presomitic mesoderm" RELATED [] synonym: "PSM" RELATED [] xref: ZFIN:ZDB-ANAT-011113-209 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000255 ! paraxial mesoderm relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000280 name: medial division namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-21 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000603 ! valvula cerebelli relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000281 name: hair cell posterior macula namespace: zebrafish_anatomy def: "Specialized neuronal receptor cells of the lateral line and acoustico-vestibular systems. Kimmel et al, 1995. (Also see Anatomical Atlas entry for hair cells by T. Whitfield.)" [ZFIN:curator] synonym: "sensory hair cells posterior macula" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-210 is_a: ZFA:0009366 ! hair cell relationship: develops_from ZFA:0001099 ! immature hair cell posterior macula relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000558 ! posterior macula relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000282 name: sensory system namespace: zebrafish_anatomy synonym: "sensory systems" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-211 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000396 ! nervous system relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000283 name: sternohyoid namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-212 is_a: ZFA:0000236 ! mandibular muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000284 name: subopercle namespace: zebrafish_anatomy synonym: "subopercles" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-213 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000285 name: superficial adductor namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-214 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000563 ! pectoral fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000286 name: superficial lateralis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-215 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000473 ! trunk musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000287 name: superior dorsal flexor namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-216 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000628 ! caudal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000288 name: supracarinalis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-217 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000473 ! trunk musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000289 name: supramaxillae namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-218 is_obsolete: true [Term] id: ZFA:0000290 name: sphenoid region namespace: zebrafish_anatomy def: "Chondrocranium bone which together form the floor and sidewalls of the middle part of the chondrocranium." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-219 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000291 name: medial octavolateralis nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-22 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000381 ! lateral line sensory nuclei relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000292 name: surface structure namespace: zebrafish_anatomy def: "Organism subdivision which is the collection of anatomical structures on the body surface." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-220 is_a: ZFA:0001308 ! organism subdivision relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000293 name: synencephalon namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-221 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000294 name: torus lateralis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-222 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000295 name: trigeminal ganglion namespace: zebrafish_anatomy def: "A prominent collection of touch-sensory neurons of the trigeminal or fifth cranial nerve, positioned beside the brain between the eye and the ear. Kimmel et al, 1995." [ZFIN:curator] synonym: "gV" RELATED [] synonym: "trigeminal ganglia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-223 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0000162 ! trigeminal placode relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000296 name: uncrossed tecto-bulbar tract namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-225 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000297 name: motor nucleus of vagal nerve namespace: zebrafish_anatomy alt_id: ZFA:0000387 synonym: "motor nucleus X" RELATED [] synonym: "nucleus motorius of nervi vagi" RELATED [] synonym: "nX" RELATED [] synonym: "vagal lobe" RELATED [] xref: ZFIN:ZDB-ANAT-011113-226 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000298 name: vent namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-227 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000299 name: ventral entopeduncular nucleus V namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-228 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000304 ! ventral telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000300 name: ventral hypohyal namespace: zebrafish_anatomy def: "The ventral hypohyal ossifies first along the anteroventral tip of the ceratohyal cartilage at the insertion of the tendon from the sternohyoideus (5.7 mm)." [ZFIN:curator] synonym: "lower hypohyal" RELATED [] synonym: "ventrohyal" RELATED [] xref: ZFIN:ZDB-ANAT-011113-229 is_a: ZFA:0001381 ! hypohyal relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000301 name: medial rectus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-23 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000511 ! extraocular musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000302 name: ventral nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-230 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000213 ! habenula relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000303 name: female organism namespace: zebrafish_anatomy def: "Gonochoristic organism that can produce female gametes." [ZFIN:curator] xref: CARO:0000028 xref: ZFIN:ZDB-ANAT-061101-4 is_a: ZFA:0001094 ! whole organism relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0000304 name: ventral telencephalon namespace: zebrafish_anatomy synonym: "subpallium" RELATED [] xref: ZFIN:ZDB-ANAT-011113-232 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000079 ! telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000305 name: ventral sulcus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-233 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000032 ! hypothalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000306 name: ventrolateral thalamic nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-234 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000458 ! ventral thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000307 name: vestibulolateralis lobe namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-235 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000100 ! cerebellum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000308 name: prevomer namespace: zebrafish_anatomy def: "A thin medial unpaired dermal bone that is kite or paddle-shape. Underlying the ethmoid, and slightly overlapping the parasphenoid posteriorly, the prevomer bears an anterolateral projection that terminates in a concave depression in which the preethmoids sit." [ZFIN:curator] synonym: "vomer" RELATED [ZFIN:ZDB-PUB-961014-192] xref: ZFIN:ZDB-ANAT-011113-236 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000309 name: E-YSL namespace: zebrafish_anatomy def: "The portion of the YSL that is outside of the blastoderm margin during epiboly. Kimmel et al, 1995." [ZFIN:curator] synonym: "external yolk syncytial layer" RELATED [ZFIN:ZDB-PUB-961014-576] xref: ZFIN:ZDB-ANAT-011113-237 relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: part_of ZFA:0000088 ! YSL relationship: start ZFS:0000013 ! Blastula:Oblong [Term] id: ZFA:0000310 name: cranial nerve VI namespace: zebrafish_anatomy synonym: "abducens nerve" RELATED [] synonym: "CN-VI" RELATED [] xref: ZFIN:ZDB-ANAT-011113-238 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000311 name: adductor mandibulae complex namespace: zebrafish_anatomy def: "Is a mandibular muscle that consists of three subdivisions A1, A2, and A3. All three originate on the hyomandibula and suspensorium but each has a distinct instertion. A1 inserts on the maxilla, A2 inserts along the caudal margin of the articular and A3 inserts on teh medial surface of the articular. See ZDB-PUB-070330-4." [ZFIN:curator] synonym: "adductor mandibulae" RELATED [] xref: ZFIN:ZDB-ANAT-011113-239 relationship: develops_from ZFA:0007049 ! adductor mandibulae relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0000312 name: mesencephalic nucleus of trigeminal nerve namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-24 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000433 ! sensory trigeminal nuclei relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000313 name: anal inclinator namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-240 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001154 ! anal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000314 name: anterior semicircular canal namespace: zebrafish_anatomy alt_id: ZFA:0000675 def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)" [ZFIN:curator] synonym: "anterior semicircular canals" RELATED [] synonym: "anterior semicircular duct" RELATED [] synonym: "rostral vertical semicircular canal" RELATED [] xref: ZFIN:ZDB-ANAT-011113-241 relationship: develops_from ZFA:0000469 ! anterior semicircular canal primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000431 ! semicircular canal relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000315 name: asteriscus namespace: zebrafish_anatomy synonym: "lagenar otolith" RELATED [] xref: ZFIN:ZDB-ANAT-011113-242 is_a: ZFA:0001617 ! otolith relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000374 ! lagena relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000316 name: basihyal namespace: zebrafish_anatomy def: "The basihyal is the 'tongue' of the a fish, the median and anteriorly projecting element of the ventral hyoid arch.Ossification of the cartilaginous basihyal is first visible at the posterior end of the club-shaped basihyal cartilage (6.0 mm). Ossification spreads throughout the cartilage, except for the anterior tip, which remains cartilaginous. The posteroventral tip extends between the left and right dorsal hypohyals." [ZFIN:curator] synonym: "basihyoid" RELATED [] synonym: "glossohyal" RELATED [] xref: ZFIN:ZDB-ANAT-011113-243 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001510 ! basihyal cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000317 name: postcranial axial skeleton namespace: zebrafish_anatomy def: "The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins." [ZFIN:curator] synonym: "axial skeleton" RELATED [] xref: ZFIN:ZDB-ANAT-011113-244 is_a: ZFA:0000434 ! skeletal system relationship: develops_from ZFA:0001080 ! sclerotome relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000318 name: brain stem/spinal tract and commissures namespace: zebrafish_anatomy synonym: "brain stem/spinal tracts and commissures" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-245 is_a: ZFA:0000145 ! CNS tracts and commissures relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000319 name: branchiostegal membrane namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-246 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000354 ! gill relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000320 name: caudal commissure namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-247 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000293 ! synencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000321 name: caudal levator namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-248 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000172 ! branchial muscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000322 name: caudal octaval nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-249 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000401 ! octaval nerve sensory nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000323 name: mesethmoid bone namespace: zebrafish_anatomy def: "Median unpaired cartilage bone that ossifies as a perichondral lamellae ensheathing the nasal septum anterodorsally and laterally (Harrington, 1955). In adult D. rerio, the center of the mesethmoid remains cartilaginous (Cubbage & Mabee, 1996). The mesethmoid meets the supraethmoid dorsally, the lateral ethmoids posterolaterally, and the vomer and parasphenoid ventrally in synostoses. Anterolaterally the mesthmoid meets the preethmoids in synchondroses." [ZFIN:curator] synonym: "ethmoid bone" RELATED [] xref: ZFIN:ZDB-ANAT-011113-25 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001321 ! neurocranial trabecula relationship: develops_from ZFA:0001405 ! ethmoid cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000351 ! olfactory region relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000324 name: caudal periventricular hypothalamus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-250 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000634 ! caudal zone relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000325 name: caudal thalamic nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-251 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000326 name: caudal vertebra namespace: zebrafish_anatomy def: "Vertebrae bearing a hemal arch and spine. The most posterior caudal vertebrae support the caudal fin and are referred to as preural vertebrae. " [ZFIN:curator] synonym: "caudal vertebrae" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-252 is_a: ZFA:0001189 ! vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000327 name: central zone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-254 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000328 name: cephalic musculature namespace: zebrafish_anatomy synonym: "head muscles" RELATED [] xref: ZFIN:ZDB-ANAT-011113-255 is_a: ZFA:0000548 ! musculature system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000329 name: chorion namespace: zebrafish_anatomy def: "The egg shell. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-256 is_a: ZFA:0000020 ! extraembryonic structure relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0000330 name: cloacal chamber namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-257 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000331 name: commissure infima of Haller namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-258 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000332 name: coracoid namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-259 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001455 ! scapulocorocoid relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000407 ! pectoral girdle relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000333 name: mesovarium namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-26 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000403 ! ovary relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000334 name: corpus mamillare namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-260 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000335 name: crossed tecto-bulbar tract namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-261 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000336 name: hypural arches namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-262 is_obsolete: true [Term] id: ZFA:0000337 name: dermopalatine namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-263 is_obsolete: true [Term] id: ZFA:0000338 name: diencephalic tracts and commissures namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-264 is_a: ZFA:0000145 ! CNS tracts and commissures relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000339 name: digestive system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-265 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000340 name: dorsal entopeduncular nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-266 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000304 ! ventral telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000341 name: dorsal flexor namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-267 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000628 ! caudal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000342 name: dorsal inclinator namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-268 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000648 ! dorsal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000343 name: dorsal nucleus of V namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-269 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000304 ! ventral telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000344 name: middle lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-27 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0005118 ! middle lateral line primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: part_of ZFA:0005114 ! middle lateral line system relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0000345 name: dorsal rectus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-270 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000511 ! extraocular musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000346 name: dorsal tegmental nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-271 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000347 name: dorsal zone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-272 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000032 ! hypothalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000348 name: duodenum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-273 is_obsolete: true [Term] id: ZFA:0000349 name: epaxialis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-274 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000473 ! trunk musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000350 name: epipleural namespace: zebrafish_anatomy def: "Epipleurals lie below the horizontal septum and are posteroventrally directed. There are ossified epipleurals in certain ostariophysans. In many lower elopocephalan teleosts including ostariophysans the epipleural bones develop an anterodorsal branch so that they are forked proximally." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-275 is_a: ZFA:0000526 ! intermuscular bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000351 name: olfactory region namespace: zebrafish_anatomy synonym: "ethmoid region" RELATED [] xref: ZFIN:ZDB-ANAT-011113-276 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000352 name: external cellular layer namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-277 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000402 ! olfactory bulb relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000353 name: fasciculus retroflexus namespace: zebrafish_anatomy synonym: "habenulointerpeduncular tract" RELATED [] xref: ZFIN:ZDB-ANAT-011113-278 is_a: ZFA:0000338 ! diencephalic tracts and commissures relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000354 name: gill namespace: zebrafish_anatomy synonym: "gills" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-279 is_a: ZFA:0000496 ! compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000272 ! respiratory system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000355 name: roof plate midbrain namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-28 is_a: ZFA:0007058 ! roof plate relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000128 ! midbrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000356 name: gill raker namespace: zebrafish_anatomy def: "Gill rakers are small anterior projections present on all of the branchial arches." [ZFIN:curator] synonym: "gill rakers" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-280 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: part_of ZFA:0000354 ! gill relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000357 name: glomerular layer namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-281 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000402 ! olfactory bulb relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000358 name: granular layer corpus cerebelli namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-282 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000359 name: habenular commissure namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-283 is_a: ZFA:0000338 ! diencephalic tracts and commissures relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000360 name: heart tube namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-284 relationship: develops_from ZFA:0000149 ! primitive heart tube relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000362 name: hypaxialis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-287 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000473 ! trunk musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000363 name: hypobranchial bone namespace: zebrafish_anatomy def: "Hypobranchials are the most medial of the bilaterally paired elements of the gill arches. Hypobranchial ossifications 1-3 (of 4) develop in the small hypobranchial cartilages that lie between the medial tips of the ceratobranchials and copula 2. The hypobranchials articulate anteromedially with the basibranchials." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-288 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001522 ! hypobranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000364 name: hypural namespace: zebrafish_anatomy def: "Expanded and laterally flattened hemal arches and spines. They support the lepidotrichia of the caudal fin. The hypurals form ventral to the posterior tip of the dorsally-flexed notochord. In zebrafish condensations of the hypurals begin forming at approximately 6 dpf (4.1 mm NL, notochord length). Mabee and Bird, 2001." [ZFIN:curator] synonym: "hyp" RELATED [] synonym: "hypuralia" RELATED [] synonym: "hypurals" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-289 is_a: ZFA:0000859 ! specialized hemal arch and spine relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0000365 name: nasal bone namespace: zebrafish_anatomy def: "Paired dermal bones, likened to a bone tube, positioned lateral to the supraethmoid. Nasal bones are transversed by the anterior most part of the supraorbital canals and bear one neuromast foramen in zebrafish Cubbage and Mabee, 1996." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-29 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000366 name: inferior raphe nucleus namespace: zebrafish_anatomy synonym: "posterior raphe nucleus" RELATED [] xref: ZFIN:ZDB-ANAT-011113-290 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001429 ! raphe nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000367 name: infraorbital bridge namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-291 is_obsolete: true [Term] id: ZFA:0000368 name: integument namespace: zebrafish_anatomy def: "The outer protective barrier that separates the animal from its aquatic environment. Le Guellec et al, 2004." [ZFIN:curator] synonym: "skin" RELATED [] xref: ZFIN:ZDB-ANAT-011113-292 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000369 name: intermandibularis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-293 is_a: ZFA:0000236 ! mandibular muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000370 name: intermediate thalamic nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-294 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000458 ! ventral thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000371 name: internal pharyngoclavicularis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-295 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000172 ! branchial muscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000372 name: interpeduncular nucleus medulla oblongata namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-296 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000373 name: juvenile namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-297 is_obsolete: true [Term] id: ZFA:0000374 name: lagena namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-298 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000559 ! otolith organ relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000375 name: last preural centrum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-299 is_obsolete: true [Term] id: ZFA:0000376 name: infraorbital namespace: zebrafish_anatomy alt_id: ZFA:0000489 def: "A dermatocranium bone which is a series of plate-like dermal bones containing the infraorbital lateral line canal under and posterior to the eye (completely surrounding the eye in primitive bony fishes)." [ZFIN:curator] synonym: "circumorbital series" RELATED [] synonym: "infraorbital series" RELATED [] xref: ZFIN:ZDB-ANAT-011113-3 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001410 ! orbital region relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000379 name: lateral forebrain bundle diencephalon namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-301 is_a: ZFA:0000338 ! diencephalic tracts and commissures relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0007012 ! lateral forebrain bundle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000380 name: lateral lemniscus nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-302 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000381 name: lateral line sensory nuclei namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-303 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000382 name: acellular anatomical structure namespace: zebrafish_anatomy def: "Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue." [ZFIN:curator] xref: CARO:0000040 xref: ZFIN:ZDB-ANAT-061101-5 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0000383 name: lateral rectus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-305 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000511 ! extraocular musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000384 name: levator arcus palatini namespace: zebrafish_anatomy def: "Is a mandibular muscle that inserts along the dorsolateral faces of the hyosymplectics. See ZDB-PUB-020703-2." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-307 relationship: develops_from ZFA:0007050 ! constrictor dorsalis relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000385 name: lymphatic system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-308 is_a: ZFA:0000010 ! cardiovascular system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000386 name: macula namespace: zebrafish_anatomy def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator] synonym: "maculae" RELATED PLURAL [] synonym: "sensory patch" RELATED [] xref: ZFIN:ZDB-ANAT-011113-309 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000217 ! inner ear relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000388 name: medial caudal lobe namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-311 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000307 ! vestibulolateralis lobe relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000389 name: medial funicular nucleus medulla oblongata namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-312 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000390 name: medial preglomerular nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-313 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000391 name: medial zone of D namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-314 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000505 ! dorsal telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000392 name: median tuberal portion namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-315 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000032 ! hypothalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000393 name: mesenchyme namespace: zebrafish_anatomy def: "A mesh-like cell arrangement, less compact than an epithelium. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-316 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000394 name: molecular layer corpus cerebelli namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-317 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000395 name: muscle pioneer somite 2 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 2" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-318 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000843 ! slow muscle cell somite 2 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000396 name: nervous system namespace: zebrafish_anatomy def: "A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS). (Source: BioGlossary, www.Biology-Text.com)" [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-319 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000397 name: nucleus subglomerulosis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-32 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000398 name: nucleus isthmi namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-320 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000399 name: secondary gustatory nucleus trigeminal nuclei namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-321 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000433 ! sensory trigeminal nuclei relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000400 name: occipital lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "supratemporal lateral line" RELATED [] xref: ZFIN:ZDB-ANAT-011113-322 is_a: ZFA:0001469 ! lateral line relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0000401 name: octaval nerve sensory nucleus namespace: zebrafish_anatomy synonym: "octaval nerve sensory nuclei" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-323 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000402 name: olfactory bulb namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-324 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000079 ! telencephalon relationship: part_of ZFA:0001149 ! olfactory system relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000403 name: ovary namespace: zebrafish_anatomy def: "Female reproductive organ." [ZFIN:curator] synonym: "ovaries" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-328 is_a: ZFA:0000413 ! gonad relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000303 ! female organism relationship: part_of ZFA:0001158 ! endocrine system relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000404 name: paracommissural nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-329 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000293 ! synencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000405 name: cranial nerve III namespace: zebrafish_anatomy synonym: "CN-III" RELATED [] synonym: "occulomotor" RELATED [] synonym: "oculomotor nerve" RELATED [] xref: ZFIN:ZDB-ANAT-011113-33 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000406 name: parvocellular superficial pretectal nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-330 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000687 ! superficial pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000407 name: pectoral girdle namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-331 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000408 name: periventricular nucleus of caudal tuberculum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-333 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000410 name: postcleithrum namespace: zebrafish_anatomy def: "Dermal bone that is part of the pectoral girdle and located ventral to the supracleithrum and posterior to the cleithrum. Postcleithral bones are paired and can vary up in number from a single pair (such as in zebrafish) to three pairs in other teleosts." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-335 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000407 ! pectoral girdle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000411 name: posterior crista primordium namespace: zebrafish_anatomy synonym: "posterior crista primordia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-336 relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0000262 ! posterior semicircular canal relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000412 name: posterior semicircular canal primordium namespace: zebrafish_anatomy synonym: "posterior semicircular canal primordia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-337 relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: part_of ZFA:0000431 ! semicircular canal relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000413 name: gonad namespace: zebrafish_anatomy def: "The part of the reproductive system that produces and releases eggs (ovary) or sperm (testis)." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060816-1 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001262 ! gonad primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000632 ! reproductive system relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000414 name: presumptive cephalic mesoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-339 relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0000041 ! mesoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0000415 name: esophageal sphincter namespace: zebrafish_anatomy synonym: "oesophagial sphincter" RELATED [] xref: ZFIN:ZDB-ANAT-011113-34 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000172 ! branchial muscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000416 name: presumptive endoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-340 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000019 ! Gastrula:Shield relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0000417 name: presumptive spinal cord namespace: zebrafish_anatomy synonym: "presumptive spinal cord neural keel" RELATED [] synonym: "presumptive spinal cord neural plate" RELATED [] synonym: "presumptive spinal cord neural rod" RELATED [] xref: ZFIN:ZDB-ANAT-011113-343 relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0007015 ! posterior presumptive neural plate relationship: start ZFS:0000019 ! Gastrula:Shield [Term] id: ZFA:0000418 name: pretectum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-344 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000419 name: pterosphenoid namespace: zebrafish_anatomy def: "Paired cartilage bones, flat and hexagonal in shape that contact the orbitosphenoid anteriorly. Roofed by the frontal and bordered posteriorly by the prootic and sphenotic, the pterosphenoid bears foramina that accommodate branches of the trigeminal and facial nerves." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-345 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001515 ! taenia marginalis posterior relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000420 name: renal artery namespace: zebrafish_anatomy synonym: "renal arteries" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-346 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000421 name: reticular formation namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-347 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000422 name: retroarticular namespace: zebrafish_anatomy def: "The retroarticular is a cartilage bone that forms at the posteroventral tip of Meckel's cartilage where the interoperculomandibular ligament attaches (5.1 mm NL). In the adult it is basically triangular in shape. The retroarticular is ligamentously connected to the interopercle and preopercle posteriorly and abuts the ventral shelf of the dentary anteriorly." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-348 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001205 ! Meckel's cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001273 ! ventral mandibular arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000423 name: anterior cardinal vein namespace: zebrafish_anatomy synonym: "ACV" RELATED [] synonym: "rostral cardinal veins" RELATED [] xref: ZFIN:ZDB-ANAT-011113-349 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000096 ! cardinal system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000424 name: opercular lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-35 is_a: ZFA:0001469 ! lateral line relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0000425 name: anterior lateral line nerve namespace: zebrafish_anatomy def: "Cranial nerve which enters the brain between cranial nerves VI and VII; contains afferents and sensory efferents to the anterior lateral line ganglia." [ZFIN:curator] synonym: "rostral lateral line nerve" RELATED [] xref: ZFIN:ZDB-ANAT-011113-350 is_a: ZFA:0000641 ! cranial nerve is_a: ZFA:0001479 ! lateral line nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001468 ! anterior lateral line system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000426 name: rostral parvocellular preoptic nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-351 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000470 ! preoptic area relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000427 name: rostral thalamic nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-352 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000653 ! dorsal thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000428 name: saccule namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-353 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000559 ! otolith organ relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000429 name: scaphium namespace: zebrafish_anatomy def: "The scaphium is a modification of NA 1 in which the neural arch is reduced and fused to a cup-shaped ossification of membrane bone, the concha. The second Weberian ossicle, consisting of three parts: the concha, the ascending process, and the articulating process." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-354 is_a: ZFA:0001066 ! neural arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001167 ! vertebra 1 relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000430 name: secondary gustatory tract namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-355 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000431 name: semicircular canal namespace: zebrafish_anatomy def: "Fluid-filled toroidal spaces, arranged orthogonally to each other in the ear, that detect angular accelerations. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)" [ZFIN:curator] synonym: "scc" RELATED [] synonym: "semicircular canals" RELATED PLURAL [] synonym: "semicircular duct" RELATED [] xref: ZFIN:ZDB-ANAT-011113-356 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000217 ! inner ear relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000433 name: sensory trigeminal nuclei namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-358 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000434 name: skeletal system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-359 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000435 name: cranial nerve II namespace: zebrafish_anatomy def: "Cranial nerve which is comprised of retinal ganglion cell axons running posterior medially towards the optic chiasm, at which some of the axons cross the midline and after which the structure is termed the optic tract." [ZFIN:curator] synonym: "CN-II" RELATED [] synonym: "optic" RELATED [] synonym: "optic nerve" RELATED [] xref: ZFIN:ZDB-ANAT-011113-36 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000338 ! diencephalic tracts and commissures relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000436 name: spleen namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-360 is_a: ZFA:0000496 ! compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0001159 ! immune system relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000437 name: stomach namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-361 is_obsolete: true [Term] id: ZFA:0000438 name: parhypural namespace: zebrafish_anatomy alt_id: ZFA:0000562 def: "Hemal arch and spine of preural centrum 1. The parhypural is defined as the most posterior hemal arch with an open canal through which the ventral aorta passes. Mabee and Bird, 2001." [ZFIN:curator] synonym: "parhyural" RELATED [] synonym: "phy" RELATED [] xref: ZFIN:ZDB-ANAT-011113-363 is_a: ZFA:0000859 ! specialized hemal arch and spine relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000557 ! preural 1 vertebra relationship: start ZFS:0000037 ! Larval:Day 5 [Term] id: ZFA:0000439 name: superficial pelvic abductor namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-364 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000258 ! pelvic fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000440 name: superior raphe nucleus namespace: zebrafish_anatomy synonym: "anterior raphe nucleus" RELATED [] xref: ZFIN:ZDB-ANAT-011113-365 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001429 ! raphe nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000441 name: suprachiasmatic nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-366 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000183 ! central pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000442 name: supraneural namespace: zebrafish_anatomy def: "Supraneurals independent, median, elongate, rod-like cartilages or bones in the dorsal skeletogenous septum between the cranium and the dorsal fin. In actinopterygians, supraneurals develop from cartilages that are independent of the neural spine (Arratia et al., 2001)." [ZFIN:curator] synonym: "sn" RELATED [] xref: ZFIN:ZDB-ANAT-011113-367 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000443 name: supraorbital lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-368 is_a: ZFA:0001469 ! lateral line relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0000444 name: suspensorium namespace: zebrafish_anatomy synonym: "hyopalatine" RELATED [] synonym: "suspensoria" RELATED [] xref: ZFIN:ZDB-ANAT-011113-369 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001216 ! splanchnocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000445 name: optic tectum namespace: zebrafish_anatomy def: "The roof of the midbrain, morphologically visible by the end of the segmentation period. Kimmel et al, 1995." [ZFIN:curator] synonym: "dorsal midbrain" RELATED [] synonym: "tectal lobe" RELATED [] synonym: "tectum" RELATED [ZFIN:ZDB-PUB-961014-576] synonym: "tectum opticum" RELATED [] xref: ZFIN:ZDB-ANAT-011113-37 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001353 ! mesencephalic tectum relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000446 name: tecto-bulbar tract namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-370 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000447 name: tela chorioidea namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-371 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000696 ! telencephalic ventricle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000448 name: tertiary gustatory nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-372 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000449 name: torus longitudinalis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-373 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001353 ! mesencephalic tectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000450 name: trochlear motor nucleus namespace: zebrafish_anatomy synonym: "motor nucleus IV" RELATED [] synonym: "nIV" RELATED [] xref: ZFIN:ZDB-ANAT-011113-374 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000451 name: upper oral valve namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-375 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000695 ! labial cavities relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000452 name: urohyal namespace: zebrafish_anatomy def: "The urohyal is a median dermal bone that ossifies in the membrane between the paired sternohyoideus muscles ventral to the anterior end of copula 1. It is an unpaired ossification of the tendon of the sternohyoideos muscles in basal teleosts, and it is paired in catfishes (Arratia and Schultze, 1990)." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-376 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000453 name: cranial nerve X namespace: zebrafish_anatomy synonym: "CN-X" RELATED [] synonym: "vagal nerve" RELATED [] synonym: "vagus nerve" RELATED [] xref: ZFIN:ZDB-ANAT-011113-377 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001101 ! gustatory system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000454 name: ventral accessory optic nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-378 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000183 ! central pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000455 name: ventral flexor namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-379 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000628 ! caudal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000456 name: ventral nucleus of V namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-380 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000304 ! ventral telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000457 name: ventral rectus namespace: zebrafish_anatomy synonym: "ventral recti" RELATED [] xref: ZFIN:ZDB-ANAT-011113-381 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000172 ! branchial muscle relationship: part_of ZFA:0000511 ! extraocular musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000458 name: ventral thalamus namespace: zebrafish_anatomy synonym: "prethalamus" RELATED [ZFIN:ZDB-PUB-060207-11] xref: ZFIN:ZDB-ANAT-011113-382 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001215 ! thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000459 name: ventromedial thalamic nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-384 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000458 ! ventral thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000460 name: Mauthner axon namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-386 is_obsolete: true [Term] id: ZFA:0000461 name: Weberian ossicle namespace: zebrafish_anatomy def: "A group of modified neural arches and spines of the first four vertebrae. These include, from anterior to posterior, the claustrum, scaphuium, intercalarium, and tripus. The os suspensorium is considered to be a fifth ossicle. Mabee and Bird, 2001." [ZFIN:curator] synonym: "Weberian ossicles" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-387 is_a: ZFA:0001491 ! solid compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001188 ! Weberian apparatus relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000462 name: abductor hyohyoid namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-388 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000463 name: adductor namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-389 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000172 ! branchial muscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000464 name: otic lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-39 is_a: ZFA:0001469 ! lateral line relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000465 name: adductor operculi namespace: zebrafish_anatomy def: "Is a hyoid muscle that moves the auditory capsules with the opercles. See ZDB-PUB-020703-2." [ZFIN:curator] synonym: "adductor operculae" RELATED [] xref: ZFIN:ZDB-ANAT-011113-390 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000466 name: anal depressor namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-391 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001154 ! anal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000467 name: anguloarticular namespace: zebrafish_anatomy def: "The anguloarticular is a compound bone that results of the fusion of the dermal angular and the cartilaginous articular and forms the posterior part of the lower jaw. The dermal part ossifies initially on the posterolateral surface of Meckel's cartilage near the articulation with the quadrate (5.5 mm NL). A posterior process forms, creating a synovial joint with the quadrate." [ZFIN:curator] synonym: "articular" RELATED [] xref: ZFIN:ZDB-ANAT-011113-392 is_a: ZFA:0001590 ! dermal bone is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001644 ! articular cartilage relationship: develops_from ZFA:0001645 ! angular bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001273 ! ventral mandibular arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000468 name: anterior crista primordium namespace: zebrafish_anatomy synonym: "anterior crista primordia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-393 relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0000314 ! anterior semicircular canal relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000469 name: anterior semicircular canal primordium namespace: zebrafish_anatomy synonym: "anterior semicircular canal primordia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-394 relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: part_of ZFA:0000431 ! semicircular canal relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000470 name: preoptic area namespace: zebrafish_anatomy def: "Area of the forebrain anterior to the posterior tuberculum and the hypothalamus and ventral to the ventral thalamus. See Figure 7, Atlas of Early Zebrafish Brain Development." [ZFIN:curator] synonym: "area praeoptica" RELATED [] synonym: "area preoptica" RELATED [] synonym: "preoptic region" RELATED [] xref: ZFIN:ZDB-ANAT-011113-395 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000471 name: atrium namespace: zebrafish_anatomy def: "One of four heart chambers." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-396 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0000472 name: basioccipital namespace: zebrafish_anatomy def: "Large median unpaired cartilage bone that contacts the exocciptal, epiotic and pterotic dorsally, and the parasphenoid anteriorly. Forms the posteroventral hind margin of the cranium, articulates with the centrum of the first vertebra. Bears a posteroventral pharyngeal process that is flattened ventrally and opposes the pharyngeal teeth of the fifth pair of ceratobranchials." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-397 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001423 ! parachordal cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001414 ! occipital region relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000473 name: trunk musculature namespace: zebrafish_anatomy synonym: "body musculature" RELATED [] xref: ZFIN:ZDB-ANAT-011113-399 is_a: ZFA:0000548 ! musculature system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000474 name: intercalar namespace: zebrafish_anatomy def: "Small membrane bone homologous with a cartilage bone in more basal fishes (Patterson, 1977). Situated between the exoccipital and the pterotic at point of attachment of short ligament that originates on the ventral arm of the posttemporal." [ZFIN:curator] synonym: "opisthotic" RELATED [] xref: ZFIN:ZDB-ANAT-011113-4 is_a: ZFA:0001636 ! membrane bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000189 ! otic region relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000475 name: paraventricular organ namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-40 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000476 name: branchiostegal ray namespace: zebrafish_anatomy def: "Branchiostegal rays are thin dermal bones that support the branchiostegal membrane. Three dermal branchiostegal rays form in the branchiostegal membrane ventral to the ceratohyal cartilage. The most posterior ray, branchiostegal 3, ossifies first (3.4 mm NL), and the most anterior ray, branchiostegal 1, ossifies last (5.5 mm NL). The most posterior two branchiostegals (2 and 3) insert externally on the ceratohyal; their anterodorsal tips are thickened triangles, and the rays are expanded. The bifurcated tip of the acinaciform anteriormost ray lies at the ventral margin of the ceratohyal." [ZFIN:curator] synonym: "branchiostegal rays" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-400 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000477 name: posterior cardinal vein namespace: zebrafish_anatomy def: "Continuation of the caudal vein cranial to the anal pore. The cardinal vein splits into a pair of vessels in the cranial trunk, just caudal to the radix of the aorta. The posterior cardinals each empty into the common cardinal vein. " [ZFIN:curator] synonym: "axial vein" RELATED [] synonym: "caudal cardinal veins" RELATED [] synonym: "PCV" RELATED [] synonym: "postcardinal vein" RELATED [] xref: ZFIN:ZDB-ANAT-011113-401 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005077 ! vascular cord relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000096 ! cardinal system relationship: part_of ZFA:0001073 ! axial vasculature relationship: part_of ZFA:0005024 ! trunk vasculature relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000479 name: caudal mesencephalo-cerebellar tract namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-403 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000480 name: caudal octavolateralis nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-404 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000381 ! lateral line sensory nuclei relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000481 name: caudal preglomerular nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-405 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000482 name: caudal tuberal nucleus namespace: zebrafish_anatomy synonym: "posterior tuberal nucleus" RELATED [] xref: ZFIN:ZDB-ANAT-011113-406 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000484 name: celiacomesenteric artery namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-408 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000485 name: central nucleus inferior lobe namespace: zebrafish_anatomy synonym: "central nucleus inferior lobes" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-409 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000165 ! inferior lobe relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000486 name: parietal bone namespace: zebrafish_anatomy def: "Paired dermal bone that covers the hind part of the cranium, overlapping the dorsal edge of the sphenotic, pterotic, epiotic and the anterior edge of the supraoccipital. The parietal are overlapped anteriorly by the frontal." [ZFIN:curator] synonym: "post parietal" RELATED [] xref: ZFIN:ZDB-ANAT-011113-41 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000487 name: central zone of D namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-410 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000505 ! dorsal telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000488 name: ceratobranchial bone namespace: zebrafish_anatomy def: "Ceratobranchials are bilaterally paired cartilage bones that form part of the ventral branchial arches. They articulate medially with the hypobranchials and laterally and dorsally with the epibranchials. Ceratobranchials 1-5 ossify in the ceratobranchial cartilages." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-411 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000490 name: commissura cerebelli namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-413 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000100 ! cerebellum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000491 name: commissure of the caudal tuberculum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-414 is_a: ZFA:0000338 ! diencephalic tracts and commissures relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000492 name: coracoradialis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-415 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000563 ! pectoral fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000493 name: decussation of medial funicular nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-416 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000494 name: deep white zone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-417 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000495 name: infraorbital 5 namespace: zebrafish_anatomy def: "Plate like dermal bone with usually only one neuromast pore (Nelson, 1969). The last infraorbital bone in the series is referred to as the dermosphenotic (Nelson, 1969). In basal teleosts it is usually the sixth bone in the series but in zebrafish it is the fifth bone." [ZFIN:curator] synonym: "dermosphenotic" RELATED [] xref: ZFIN:ZDB-ANAT-011113-418 is_a: ZFA:0000376 ! infraorbital relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0000496 name: compound organ namespace: zebrafish_anatomy def: "Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types." [ZFIN:curator] synonym: "organ" RELATED [] xref: CARO:0000024 xref: ZFIN:ZDB-ANAT-061101-6 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001094 ! whole organism relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000497 name: pelvic adductor profundus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-42 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000258 ! pelvic fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000498 name: dilator operculi namespace: zebrafish_anatomy def: "Is a mandibular muscle that inserts along the dorsolateral faces of the opercles. See ZDB-PUB020703-2." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-420 relationship: develops_from ZFA:0007050 ! constrictor dorsalis relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000499 name: dorsal arrector namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-421 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000563 ! pectoral fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000500 name: dorsal erector namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-422 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000648 ! dorsal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000501 name: dorsal funiculus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-423 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000502 name: dorsal motor nucleus trigeminal nerve namespace: zebrafish_anatomy synonym: "motor nucleus V" RELATED [] synonym: "nV" RELATED [] xref: ZFIN:ZDB-ANAT-011113-424 is_a: ZFA:0001365 ! trigeminal motor nuclei relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000503 name: dorsal oblique branchial muscle namespace: zebrafish_anatomy synonym: "dorsal oblique branchial muscles" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-425 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000172 ! branchial muscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000504 name: dorsal retractor namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-426 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000172 ! branchial muscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000505 name: dorsal telencephalon namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-427 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000079 ! telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000506 name: dorsal zone of D namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-428 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000505 ! dorsal telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000507 name: epineural namespace: zebrafish_anatomy def: "Some or all epineural bones ossify free from the neural arches in most teleosts. In some lower teleosts, e.g., Leptolepis, Hiodon, elopiforms and albuliforms, ossification proceeds from the attachment point of the ligament to the arch, and the epineural is a process of the neural arch. In many lower teleosts epineurals are forked proximally." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-429 is_a: ZFA:0000526 ! intermuscular bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000508 name: pelvic radial namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-43 is_a: ZFA:0000271 ! radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000509 name: epithalamus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-430 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000510 name: external levatores namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-432 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000172 ! branchial muscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000511 name: extraocular musculature namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-433 is_a: ZFA:0000328 ! cephalic musculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000512 name: facial lobe namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-434 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000513 name: fast muscle cell somite 1 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 1" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-435 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000514 name: frontal bone namespace: zebrafish_anatomy def: "Large elongated paired dermal bones that roof the cranium and bear part of the supraorbital canal. The frontal bones cover the upper edge of the lateral ethmoid, orbitosphenoid and pterosphenoids and overlaps the parietal bone posteriorly." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-436 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001410 ! orbital region relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000516 name: periventricular grey zone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-44 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000517 name: glossopharyngeal lobe namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-440 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000518 name: griseum centrale namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-441 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000519 name: hemal arch namespace: zebrafish_anatomy def: "Hemal arches extend ventrally from the centra of caudal and transitional vertebrae to enclose the caudal artery and vein. In cyprinids, the hemal arch forms directly in membrane bone." [ZFIN:curator] synonym: "haemal arch" RELATED [] synonym: "ventral arcocentrum" RELATED [] xref: ZFIN:ZDB-ANAT-011113-442 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001361 ! basiventral relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000326 ! caudal vertebra relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000520 name: horizontal commissure namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-443 is_a: ZFA:0000338 ! diencephalic tracts and commissures relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000521 name: hyoid muscle namespace: zebrafish_anatomy synonym: "hyoid muscles" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-444 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001307 ! pharyngeal musculature relationship: part_of ZFA:0001611 ! pharyngeal arch 2 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000522 name: inferior hyohyoid namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-445 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000523 name: inferior reticular formation namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-446 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000542 ! medial column relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000524 name: infraorbital lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-447 is_a: ZFA:0001469 ! lateral line relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000525 name: intercalarium namespace: zebrafish_anatomy def: "Third Weberian ossicle. The intercalarium is a Y- or T-shaped modification of neural arch 2 in which an anterolateral process (the manubrium) is embedded in the interossicular ligament; other parts include the ascending and articulating processes. Bird and Mabee, 2003." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-448 is_a: ZFA:0001066 ! neural arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001168 ! vertebra 2 relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000526 name: intermuscular bone namespace: zebrafish_anatomy def: "Axial bone which is a segmental ossification that forms in the myoseptum; found in teleosts fishes only." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-449 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000527 name: pharyngobranchial bone namespace: zebrafish_anatomy def: "The pharyngobranchials are the dorsalmost bones of the branchial arches located immediately dorsal and medial to the epibranchials." [ZFIN:curator] synonym: "infrapharyngobranchial" RELATED [] xref: ZFIN:ZDB-ANAT-011113-45 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000528 name: interradialis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-450 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000628 ! caudal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000529 name: kidney namespace: zebrafish_anatomy synonym: "mesonephros" RELATED [] xref: ZFIN:ZDB-ANAT-011113-451 is_a: ZFA:0001490 ! cavitated compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000163 ! renal system relationship: part_of ZFA:0001159 ! immune system relationship: part_of ZFA:0001438 ! coelom relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000530 name: lapillus namespace: zebrafish_anatomy alt_id: ZFA:0001102 synonym: "immature anterior otolith" RELATED [] synonym: "utricular otolith" RELATED [] xref: ZFIN:ZDB-ANAT-011113-452 is_a: ZFA:0001617 ! otolith relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000700 ! utricle relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000531 name: lateral column namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-453 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000421 ! reticular formation relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000532 name: lateral division namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-454 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000603 ! valvula cerebelli relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000533 name: lateral funiculus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-455 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000534 name: lateral longitudinal fasciculus namespace: zebrafish_anatomy alt_id: ZFA:0000198 synonym: "lateral longitundinal fasciculus" RELATED [] xref: ZFIN:ZDB-ANAT-011113-456 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000535 name: lateral reticular nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-457 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000531 ! lateral column relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000536 name: lateral zone of D namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-458 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000505 ! dorsal telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000537 name: levator operculi namespace: zebrafish_anatomy synonym: "levator operculae" RELATED [] xref: ZFIN:ZDB-ANAT-011113-459 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000538 name: rib namespace: zebrafish_anatomy def: "Ribs are intersegmental rod-shaped bones that form in the peritoneal membrane and attach to the vertebral parapophyses. They protect and support internal organs." [ZFIN:curator] synonym: "dorsal rib" RELATED [] synonym: "pleural rib" RELATED [] xref: ZFIN:ZDB-ANAT-011113-46 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001582 ! non-Weberian precaudal vertebra relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000539 name: locus coeruleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-460 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000540 name: magnocellular octaval nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-461 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000401 ! octaval nerve sensory nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000541 name: marginal blastomere namespace: zebrafish_anatomy def: "Cells (incompletely cleaved before the YSL forms), located at the surface just at the rim of the blastodisc, external to the deep blastomeres. Kimmel et al, 1995." [ZFIN:curator] synonym: "marginal blastomeres" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-462 is_a: ZFA:0000093 ! blastomere relationship: end ZFS:0000015 ! Blastula:Dome relationship: start ZFS:0000005 ! Cleavage:16-cell [Term] id: ZFA:0000542 name: medial column namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-463 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000421 ! reticular formation relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000543 name: medial longitudinal fasciculus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-464 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000544 name: medial pterygiophores anal fin namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-465 is_obsolete: true [Term] id: ZFA:0000545 name: medulla oblongata namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-466 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000029 ! hindbrain relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000546 name: mesonephric duct namespace: zebrafish_anatomy def: "Duct of the adult kidney (mesonephros), present bilaterally ventral to the somites and leading to the cloacal chamber." [ZFIN:curator] synonym: "renal duct" RELATED [] synonym: "Wolffian duct" RELATED [] xref: ZFIN:ZDB-ANAT-011113-467 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000163 ! renal system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000547 name: mouth namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-468 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0001290 ! stomodeum relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0001114 ! head relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000548 name: musculature system namespace: zebrafish_anatomy synonym: "muscle" RELATED [] synonym: "muscles" RELATED [] xref: ZFIN:ZDB-ANAT-011113-469 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000549 name: posttemporal namespace: zebrafish_anatomy def: "Paired fin bone that attaches the pectoral girdle to the skull via two projections contacting the epiotic and intercalar bones, and carry the main laterosensory canal." [ZFIN:curator] synonym: "postemporal" RELATED [] xref: ZFIN:ZDB-ANAT-011113-47 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000407 ! pectoral girdle relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000550 name: naris namespace: zebrafish_anatomy synonym: "nares" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-470 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: part_of ZFA:0001114 ! head relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000551 name: nucleus lateralis valvulae namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-471 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000552 name: nucleus ruber namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-472 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000553 name: oculomotor nucleus namespace: zebrafish_anatomy synonym: "motor nucleus III" RELATED [] synonym: "nIII" RELATED [] xref: ZFIN:ZDB-ANAT-011113-474 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000554 name: olfactory epithelium namespace: zebrafish_anatomy def: "Nasal epithelium wherein ciliated olfactory receptor neurons, supporting cells, and basal cells are located." [ZFIN:curator] synonym: "nasal epithelium" RELATED [] synonym: "nasal sensory epithelium" RELATED [] xref: ZFIN:ZDB-ANAT-011113-475 relationship: develops_from ZFA:0001431 ! primitive olfactory epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000555 name: opercular flap namespace: zebrafish_anatomy synonym: "gill cover" RELATED [] synonym: "opercular apparatus" RELATED [] synonym: "operculum" RELATED [] xref: ZFIN:ZDB-ANAT-011113-476 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000556 name: optic chiasm namespace: zebrafish_anatomy def: "Decussation of cranial nerve II axons whereby some cross the midline and some remain ipsilateral." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-477 is_a: ZFA:0000338 ! diencephalic tracts and commissures relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000557 name: preural 1 vertebra namespace: zebrafish_anatomy def: "Vertebra anterior to the urostyle; sometimes termed the 'penultimate' vertebra. Mabee and Bird, 2001." [ZFIN:curator] synonym: "penultimate vertebra" RELATED [] synonym: "preural centrum 1" RELATED [] synonym: "pu1" RELATED [] synonym: "second last vertebra" RELATED [] xref: ZFIN:ZDB-ANAT-011113-479 is_a: ZFA:0000734 ! preural vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000037 ! Larval:Day 5 [Term] id: ZFA:0000558 name: posterior macula namespace: zebrafish_anatomy def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator] synonym: "pm" RELATED [] synonym: "posteromedial macula" RELATED [] synonym: "sensory patch" RELATED [] xref: ZFIN:ZDB-ANAT-011113-48 is_a: ZFA:0000386 ! macula relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000559 name: otolith organ namespace: zebrafish_anatomy synonym: "otolith organs" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-480 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000217 ! inner ear relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000560 name: oviduct namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-481 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000303 ! female organism relationship: part_of ZFA:0000632 ! reproductive system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000561 name: parasphenoid namespace: zebrafish_anatomy def: "Long, unpaired median dermal bone that runs almost the entire length of the cranium. Contacts the prevomer anteriorly, and the prootic and basioccipital posteriorly. Anteriorly the parasphenoid is a long, thin bone that widens abruptly at the point of contact with the prootic." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-482 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001410 ! orbital region relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000563 name: pectoral fin musculature namespace: zebrafish_anatomy synonym: "pectoral fin muscle" RELATED [] xref: ZFIN:ZDB-ANAT-011113-484 is_a: ZFA:0000207 ! fin musculature relationship: develops_from ZFA:0001000 ! mesenchyme pectoral fin relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001161 ! pectoral fin relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0000564 name: pelvic abductor profundus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-485 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000258 ! pelvic fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000565 name: pelvic girdle namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-486 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000566 name: posterior crista namespace: zebrafish_anatomy alt_id: ZFA:0000478 def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator] synonym: "caudal crista" RELATED [] synonym: "pc" RELATED [] synonym: "posterior crista ampullaris" RELATED [] synonym: "posterior cristae" RELATED PLURAL [] synonym: "sensory patch" RELATED [] synonym: "sensory patches" RELATED [] xref: ZFIN:ZDB-ANAT-011113-490 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000262 ! posterior semicircular canal relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0000567 name: premaxilla namespace: zebrafish_anatomy def: "The premaxilla is a bone of the upper jaw. It is an L-shaped bone first visible as a thin sliver in the anterodorsal region of the upper lip, anterior to the dorsal tip of the maxilla (5.7 mm). In the adult, the premaxilla is ligamentously attached to its counterpart at the midline and the kinethmoid posterodorsally, by the premaxillo-rostroid ligaments. Premaxillary teeth are absent in zebrafish." [ZFIN:curator] synonym: "premaxillae" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-492 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000568 name: presumptive blood namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-493 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0000569 name: presumptive hindbrain namespace: zebrafish_anatomy synonym: "presumptive rhombencephalon" RELATED [] xref: ZFIN:ZDB-ANAT-011113-495 relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007015 ! posterior presumptive neural plate relationship: start ZFS:0000019 ! Gastrula:Shield [Term] id: ZFA:0000570 name: optic primordium namespace: zebrafish_anatomy alt_id: ZFA:0000021 synonym: "eye field" RELATED [] xref: ZFIN:ZDB-ANAT-011113-496 relationship: end ZFS:0000023 ! Segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0000571 name: presumptive telencephalon namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-497 relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000573 name: internal cellular layer namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-5 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000402 ! olfactory bulb relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000574 name: presumptive diencephalon namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-50 relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000575 name: prootic namespace: zebrafish_anatomy def: "Paired cartilage bone that contacts the pterosphenoid anteriorly, the sphenotic and the pterotic dorsally, and the epiotic and basioccipital posteriorly. The parasphenoid covers the ventral region of each prootic, the upper edge of which contributes to the hyomandibular facet. Bear foramina that accommodate branches of the trigeminal and facial nerves." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-500 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001423 ! parachordal cartilage relationship: develops_from ZFA:0001425 ! basal plate cartilage relationship: develops_from ZFA:0001500 ! auditory capsule relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000189 ! otic region relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000576 name: pterotic namespace: zebrafish_anatomy def: "Paired cartilage bone that contacts the autosphenotic anteriorly, the parietal dorsally, the prootic ventrally, and the epiotic and exoccipital posteriorly. The pterotic encloses the horizontal semicircular canal of the inner ear. The lower edge of the pterotic contributes to the hyomandibular facet." [ZFIN:curator] synonym: "autopterotic" RELATED [] xref: ZFIN:ZDB-ANAT-011113-501 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001500 ! auditory capsule relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000577 name: renal portal vein namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-502 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005024 ! trunk vasculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000578 name: ceratohyal bone namespace: zebrafish_anatomy def: "The ceratohyal begins as a ossification in the anterior portion of the ceratohyal cartilage (4.6 mm NL). The posterior end broadens and meets the epihyal in a pad of cartilage. The anterior end broadens and terminates in two heads (8.8 mm). The anterodorsal head forms a synchondrosis with the dorsal hypohyal and the anteroventral head forms a synchondrosis with the ventral hypohyal. All of the branchiostegal rays articulate with the ventral edge of the ceratohyal." [ZFIN:curator] synonym: "anterior ceratohyal" RELATED [] synonym: "ceratohyal anterior" RELATED [] synonym: "rostral ceratohyal" RELATED [] xref: ZFIN:ZDB-ANAT-011113-505 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001400 ! ceratohyal cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000579 name: rostral mesencephalo-cerebellar tract namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-506 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000580 name: rostral preglomerular nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-507 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000581 name: rostral tuberal nucleus namespace: zebrafish_anatomy synonym: "anterior tuberal nucleus" RELATED [] xref: ZFIN:ZDB-ANAT-011113-508 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000707 ! ventral zone relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000582 name: saccus dorsalis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-509 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000509 ! epithalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000583 name: scapula namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-510 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001455 ! scapulocorocoid relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000407 ! pectoral girdle relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000585 name: kinethmoid cartilage namespace: zebrafish_anatomy def: "Cranial cartilage which is a small median cartilage located between the premaxillae and anterodorsal to the ethmoid." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-115 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000040 ! Larval:Days 14-20 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000586 name: preural 2 vertebra namespace: zebrafish_anatomy def: "Vertebra anterior to preural centrum 1; sometimes termed the 'antepenultimate' vertebra. Mabee and Bird, 2001." [ZFIN:curator] synonym: "antepenultimate vertebra" RELATED [] synonym: "preural centrum 2" RELATED [] synonym: "pu2" RELATED [] synonym: "third last vertebra" RELATED [] xref: ZFIN:ZDB-ANAT-011113-514 is_a: ZFA:0000734 ! preural vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0000587 name: sphenotic namespace: zebrafish_anatomy def: "Paired cartilage bone that contacts the pterosphenoid anteriorly, the prootic ventrally, and the pterotic posteriorly. Roofed by the frontal bone anteriorly and the parietal bone posteriorly, the sphenotic bears a large anterolateral process that borders the posterodorsal margain of the orbit. The lower edge of the sphenotic contributes to the hyomandibular facet." [ZFIN:curator] synonym: "autosphenotic" RELATED [] xref: ZFIN:ZDB-ANAT-011113-515 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001506 ! tectum synoticum relationship: develops_from ZFA:0001515 ! taenia marginalis posterior relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000189 ! otic region relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000588 name: statoacoustic (VIII) ganglion namespace: zebrafish_anatomy def: "The sensory ganglion of the ear. (See Anatomical Atlas entry for statoacoustic ganglion by T. Whitfield.)" [ZFIN:curator] synonym: "auditory ganglion" RELATED [] synonym: "gVIII" RELATED [] synonym: "sag" RELATED [] synonym: "statoacoustic ganglia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-516 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0000138 ! otic placode relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001138 ! vestibuloauditory system relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000589 name: sulcus ypsiloniformis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-518 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000505 ! dorsal telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000590 name: oral region namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-519 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000547 ! mouth relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000591 name: presumptive paraxial mesoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-52 relationship: end ZFS:0000021 ! Gastrula:90%-epiboly relationship: part_of ZFA:0001377 ! presumptive mesoderm relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0000592 name: superficial pelvic adductor namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-520 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000258 ! pelvic fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000593 name: superior reticular formation medial column namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-521 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000542 ! medial column relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000594 name: supracleithrum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-522 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000407 ! pectoral girdle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000595 name: supraoccipital namespace: zebrafish_anatomy def: "Large shield-shaped unpaired median cartilage bone that contact the parietal anteriorly, and the exocciptial and epiotic laterally. Forms the posterodorsal most point of the cranium. The supraoccipital usually bears a crest that extends posterodorsally." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-523 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001506 ! tectum synoticum relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001414 ! occipital region relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000596 name: supraorbital series namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-524 is_obsolete: true [Term] id: ZFA:0000597 name: telencephalic tracts namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-525 is_a: ZFA:0000145 ! CNS tracts and commissures relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000079 ! telencephalon relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000598 name: testis namespace: zebrafish_anatomy def: "Male reproductive organ." [ZFIN:curator] synonym: "testes" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-526 is_a: ZFA:0000413 ! gonad relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000242 ! male organism relationship: part_of ZFA:0001158 ! endocrine system relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000599 name: torus semicircularis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-527 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001353 ! mesencephalic tectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000600 name: cranial nerve IV namespace: zebrafish_anatomy synonym: "CN-IV" RELATED [] synonym: "trochlear" RELATED [] synonym: "trochlear nerve" RELATED [] xref: ZFIN:ZDB-ANAT-011113-528 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000601 name: pretectal periventricular nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-53 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000293 ! synencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000602 name: uroneural namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-530 is_a: ZFA:0001066 ! neural arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000603 name: valvula cerebelli namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-531 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000100 ! cerebellum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000604 name: ventral aorta namespace: zebrafish_anatomy def: "Outflow artery from the heart to the aortic arches. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-532 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000605 name: ventral funiculus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-533 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000606 name: ventral oblique branchial muscle namespace: zebrafish_anatomy synonym: "ventral oblique branchial muscles" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-534 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000172 ! branchial muscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000607 name: ventral rhombencephalic commissure brain stem namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-535 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000608 name: ventral transverse namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-536 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000172 ! branchial muscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000609 name: ventrolateral nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-537 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000599 ! torus semicircularis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000610 name: vertical myoseptum namespace: zebrafish_anatomy def: "Connective tissue partitions developing between the myotomes . Kimmel et al, 1995." [ZFIN:curator] synonym: "transverse myoseptum" RELATED [] xref: ZFIN:ZDB-ANAT-011113-538 is_a: ZFA:0001089 ! myoseptum relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000611 name: visceromotor column namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-539 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000612 name: protractor hyoidei namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-54 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000614 name: abductor profundus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-542 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000563 ! pectoral fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000615 name: adductor arcus palatini namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-543 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000616 name: adductor profundus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-544 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000563 ! pectoral fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000617 name: anal erector namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-545 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001154 ! anal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000618 name: ansulate commissure namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-546 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000619 name: anterior crista namespace: zebrafish_anatomy alt_id: ZFA:0000273 def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator] synonym: "ac" RELATED [] synonym: "anterior crista ampullaris" RELATED [] synonym: "anterior cristae" RELATED PLURAL [] synonym: "rostral crista" RELATED [] synonym: "sensory patch" RELATED [] synonym: "sensory patches" RELATED [] xref: ZFIN:ZDB-ANAT-011113-547 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000314 ! anterior semicircular canal relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0000620 name: autopalatine namespace: zebrafish_anatomy def: "The cartilaginous autopalatine forms from the anterior palatoquadrate arch. The first sign of ossification is visible at the anterior tip where it articulates with the maxilla (7.6 mm). In adults there are three processes at the anterior portion of the palatine: a ventromedial process, which forms the socket of the small ball- and- socket joint with the preethmoid; a dorsomedial process, which is connected by a short ligament to the ethmoid; and a lateral process, which extends toward the first infraorbital. Possession of a dorsomedial process, which abuts the ethmoid, is a unique feature shared by Cypriniformes (Fink and Fink, 1981). The palatine has two components, the autopalatine (derived from pars autopalatine) and the dermal component having teeth, the dermopalatine Arratia & Schultze 1990. The element in cypriniforms is only the cartilage part, so that it is more correct to name it autopalatine and not as palatine in general that it implies a fusion of elements (as in perciforms)." [ZFIN:curator] synonym: "palatine" RELATED [] xref: ZFIN:ZDB-ANAT-011113-549 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0000621 name: quadrate namespace: zebrafish_anatomy def: "The quadrate is the dorsal bone in the jaw joint with the anguloarticular of the lower jaw. Ossification of the quadrate, a cartilage bone, begins as a posteriorly projecting membranous spine between the symplectic cartilage and the preopercle (5.1 mm NL). The body of the quadrate ossifies first at the ball-and-socket articulation with the anguloarticular (6.5 mm). The adult quadrate is shaped roughly like an inverted triangle with a long, posteriorly projecting spine off its posteroventral edge. The presence of a posteroventral or posterior process of the quadrate is a synapomorphy of Teleostei." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-55 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000622 name: barbel namespace: zebrafish_anatomy def: "Surface structure which is a tactile structure found in the branchial region. Barbels are covered with epidermis rich in taste buds, and are innervated by branches of the cranial nerves." [ZFIN:curator] synonym: "barble" RELATED [] xref: ZFIN:ZDB-ANAT-011113-550 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0005119 ! barbel primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0001114 ! head relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0000623 name: basipterygium namespace: zebrafish_anatomy synonym: "pelvic bone" RELATED [] xref: ZFIN:ZDB-ANAT-011113-551 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001539 ! basipterygium cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000565 ! pelvic girdle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000624 name: brachium conjunctivium namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-552 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000625 name: branchial bar namespace: zebrafish_anatomy synonym: "branchial bars" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-553 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000056 ! pharynx relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000626 name: bulbo-spinal tract namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-554 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000627 name: epihyal namespace: zebrafish_anatomy def: "The cartilaginous epihyal begins ossifying on the anterior surface of the posterior end of the ceratohyal cartilage near the site of articulation with the interhyal (5.8 mm). It joins the ceratohyal in a pad of persisting cartilage." [ZFIN:curator] synonym: "caudal ceratohyal" RELATED [] synonym: "posterior ceratohyal" RELATED [] xref: ZFIN:ZDB-ANAT-011113-555 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001400 ! ceratohyal cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000628 name: caudal fin musculature namespace: zebrafish_anatomy def: "The caudal fin is the most posterior median fin. It is composed of a complex of three modified centra and modified neural and hemal arches and spines. Mabee and Bird, 2001." [ZFIN:curator] synonym: "tail fin" RELATED [] xref: ZFIN:ZDB-ANAT-011113-556 is_a: ZFA:0000207 ! fin musculature relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001058 ! caudal fin relationship: start ZFS:0000037 ! Larval:Day 5 [Term] id: ZFA:0000629 name: caudal motor nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-557 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000713 ! abducens motor nuclei relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000630 name: caudal parvocellular preoptic nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-558 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000470 ! preoptic area relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000631 name: caudal pretectal nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-559 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000687 ! superficial pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000632 name: reproductive system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-56 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0000633 name: caudal tuberculum namespace: zebrafish_anatomy synonym: "posterior tubercle" RELATED [] synonym: "posterior tuberculum" RELATED [] xref: ZFIN:ZDB-ANAT-011113-560 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000634 name: caudal zone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-561 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000392 ! median tuberal portion relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000635 name: central pretectal nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-562 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000183 ! central pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000636 name: cerebellar crest namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-563 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000291 ! medial octavolateralis nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000637 name: claustrum cartilage namespace: zebrafish_anatomy def: "The claustrum is a bilaterally paired cartilage or cartilage replacement bone with extensions of membrane bone forming part of a dorsolateral protective wall around the neural canal between the back of the skull and the beginning of the neural arch series. The first Weberian ossicle. Most recently, de Pinna and Grande (2003) have proposed the claustrum is homologous to the accessory neural arch of lower teleosts." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-564 is_a: ZFA:0001457 ! postcranial axial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000638 name: commissura rostral, pars dorsalis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-565 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001108 ! anterior commissure relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000639 name: commissure of the secondary gustatory nuclei namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-566 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000640 name: cornea namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-567 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000107 ! eye relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0000641 name: cranial nerve namespace: zebrafish_anatomy def: "Twelve pairs of cranial nerves exit/enter the cranium through openings in the skull. The nerves contain efferent axons with motor and glandular functions, as well as afferent axons from cranial ganglia with sensory functions. The nerves are numbered in a rostral to caudal sequence, with the exception of the lateral line nerves." [ZFIN:curator] synonym: "cranial nerves" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-568 is_a: ZFA:0007009 ! nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000396 ! nervous system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000642 name: decussation of the medial octavolateralis nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-569 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000381 ! lateral line sensory nuclei relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000643 name: rostral cerebellar tract namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-57 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000644 name: dental plate namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-570 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000547 ! mouth relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000645 name: descending octaval nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-571 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000401 ! octaval nerve sensory nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000646 name: anal fin distal radial namespace: zebrafish_anatomy def: "Rod-like internal median skeletal support bones of the anal fin, which articulate with the lepidotrichia distally." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-572 is_a: ZFA:0001646 ! anal fin radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001420 ! anal fin pterygiophore relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000647 name: dorsal caudal thalamic nucleus namespace: zebrafish_anatomy synonym: "dorsal posterior thalamic nucleus" RELATED [] xref: ZFIN:ZDB-ANAT-011113-573 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000653 ! dorsal thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000648 name: dorsal fin musculature namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-574 is_a: ZFA:0000207 ! fin musculature relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001173 ! dorsal fin relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000649 name: dorsal horn spinal cord namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-575 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000650 name: dorsal motor root of V namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-576 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000651 name: dorsal pelvic arrector namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-577 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000258 ! pelvic fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000652 name: dorsal root namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-578 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000653 name: dorsal thalamus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-579 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001215 ! thalamus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000654 name: rostral motor nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-58 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000713 ! abducens motor nuclei relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000655 name: dorsomedial optic tract namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-580 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000252 ! optic tract relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000656 name: ectopterygoid namespace: zebrafish_anatomy def: "The ectopterygoid is dermal bone located at the anterior part of the palatoquadrate. It is first visible as a very thin ossification along the anteroventral border of the palatoquadrate cartilage (6.4 mm). In adults it is a long sliver of bone that is narrow anteriorly where it meets the entopterygoid in a synostosis. It is slightly wider at its posterior synostosis with the quadrate." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-581 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000657 name: entopterygoid namespace: zebrafish_anatomy def: "The entopterygoid is a dermal bone that forms the anteroventral and ventral surface of the orbit. It develops as a long sliver of bone developing in the membrane dorsomedial to the palatoquadrate cartilage (3.8 mm NL)." [ZFIN:curator] synonym: "endopterygoid" RELATED [] synonym: "mesopterygoid" RELATED [] xref: ZFIN:ZDB-ANAT-011113-582 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000658 name: epibranchial bone namespace: zebrafish_anatomy def: "Epibranchials are dorsal parts of the gill arches. Epibranchials 1-4 ossify in the epibranchial cartilages in a posterior to anterior progression. The cartilaginous tips of the epibranchials articulate laterally with the cartilaginous tips of the ceratobranchials. Gill rakers are present on the anterior and posterior edges of epibranchials 2 4 and the posterior edge of epibranchial 1. A reduced gill raker is present on the anterior margin of epibranchial 1 in some specimens." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-583 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001527 ! epibranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000660 name: epural namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-585 is_a: ZFA:0001336 ! neural spine relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000661 name: exoccipital namespace: zebrafish_anatomy def: "Paired cartilage bone that bears a large foramen (lateral occipital foramen). Contacts the supraoccipital dorsally, the epiotic laterally and the basioccipital ventrally. Forms the posterior hind margin of the cranium and borders the lateral and posterior margins of the forum (foramen) magnum." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-586 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001423 ! parachordal cartilage relationship: develops_from ZFA:0001504 ! occipital arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001414 ! occipital region relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000662 name: external pharyngoclavicularis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-587 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000172 ! branchial muscle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000663 name: extrascapular namespace: zebrafish_anatomy alt_id: ZFA:0001413 synonym: "supratemporal" RELATED [] xref: ZFIN:ZDB-ANAT-011113-588 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000407 ! pectoral girdle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000664 name: cranial nerve VII namespace: zebrafish_anatomy synonym: "CN-VII" RELATED [] synonym: "facial nerve" RELATED [] xref: ZFIN:ZDB-ANAT-011113-589 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001101 ! gustatory system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000665 name: rostral root of abducens nerve namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-59 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000666 name: filamental artery namespace: zebrafish_anatomy synonym: "filamental arteries" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-590 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000667 ! gill filament relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0000667 name: gill filament namespace: zebrafish_anatomy def: "Branched region of the gill where respiratory exchange takes place. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-592 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000354 ! gill relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000668 name: cranial nerve IX namespace: zebrafish_anatomy synonym: "CN-IX" RELATED [] synonym: "glossopharyngeal nerve" RELATED [] xref: ZFIN:ZDB-ANAT-011113-594 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001101 ! gustatory system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000669 name: head kidney namespace: zebrafish_anatomy def: "The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis. Davidson and Zon 2004." [ZFIN:curator] synonym: "anterior kidney" RELATED [] synonym: "kidney marrow" RELATED [] xref: ZFIN:ZDB-ANAT-011113-595 is_a: ZFA:0000496 ! compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000529 ! kidney relationship: part_of ZFA:0001158 ! endocrine system relationship: part_of ZFA:0005023 ! hematopoietic system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000670 name: hepatic vein namespace: zebrafish_anatomy synonym: "hepatic veins" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-596 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000671 name: horizontal myoseptum namespace: zebrafish_anatomy def: "A connective tissue partition developing at the apex of the chevron-shaped myotome and separating dorsal (epaxial) and ventral (hypaxial) body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-597 is_a: ZFA:0001089 ! myoseptum relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000672 name: hyomandibula namespace: zebrafish_anatomy def: "The hyomandibula is the large, dorsal-most member of the hyoid arch. It begins ossifying in the dorsal edge of the hyosymplectic cartilage near the hyomandibular foramen (4.6 mm NL). Ossification spreads through the cartilage, and sheets of membrane bone form off the cartilage model anteriorly and posteriorly (6.6 mm). In the adult, the hyomandibula has cartilage-capped anterior and posterior articulating heads that meet the sphenotic-prootic fossa and the pterotic fossa, respectively, in synovial joints. A posterior knob of bone develops, also capped in cartilage, and it forms a synovial joint with the opercle." [ZFIN:curator] synonym: "hyomandibular" RELATED [] xref: ZFIN:ZDB-ANAT-011113-598 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001422 ! hyosymplectic cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001401 ! dorsal hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000673 name: hypobranchial artery namespace: zebrafish_anatomy def: "A pair of HA are connect one to each AA1. They run rostromedially until at the extreme rostro-ventral midline the two vessels merge and then run straight caudally along the ventral midline until they reach the cranial end of the ventral aorta (VA). There, the single HA passes just dorsal to the rostral end of the VA and then immediately splits again into a pair of HA. The paired HA continue caudally just to either side of the ventral midline. The HA provide blood supply to the ventral branchial region and the heart.Isogai et al. 2001." [ZFIN:curator] synonym: "HA" RELATED [] xref: ZFIN:ZDB-ANAT-011113-599 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0000674 name: interopercle namespace: zebrafish_anatomy synonym: "interopercles" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-6 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000676 name: sagitta namespace: zebrafish_anatomy alt_id: ZFA:0001103 synonym: "immature posterior otolith" RELATED [] synonym: "saccular otolith" RELATED [] xref: ZFIN:ZDB-ANAT-011113-61 is_a: ZFA:0001617 ! otolith relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000428 ! saccule relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000677 name: segmental intercostal artery namespace: zebrafish_anatomy synonym: "segmental intercostal arteries" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-62 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000678 name: hair cell anterior macula namespace: zebrafish_anatomy def: "Specialized neuronal receptor cells of the lateral line and acoustico-vestibular systems. Kimmel et al, 1995. (Also see Anatomical Atlas entry for hair cells by T. Whitfield.)" [ZFIN:curator] synonym: "sensory hair cells anterior macula" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-63 is_a: ZFA:0009366 ! hair cell relationship: develops_from ZFA:0001098 ! immature hair cell anterior macula relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000168 ! anterior macula relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000679 name: sensory root of facial nerve namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-64 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000680 name: sinoatrial valve namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-65 is_a: ZFA:0005065 ! heart valve relationship: develops_from ZFA:0001317 ! endocardial cushion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000154 ! sinus venosus relationship: part_of ZFA:0000471 ! atrium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000681 name: neural postzygapophysis namespace: zebrafish_anatomy def: "Paired, dorsomedially directed processes on the posterior ends of the centra, ligamentously joined to the neural prezygapophyses of the immediately posterior vertebra." [ZFIN:curator] synonym: "neural postzygapophyses" RELATED PLURAL [] synonym: "neural postzygopophyses" RELATED [] xref: ZFIN:ZDB-ANAT-060331-3 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001066 ! neural arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000682 name: spinal artery namespace: zebrafish_anatomy synonym: "spinal arteries" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-67 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000683 name: subcommissural organ namespace: zebrafish_anatomy synonym: "SCO" RELATED [] xref: ZFIN:ZDB-ANAT-011113-69 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000293 ! synencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000684 name: intertectal commissure namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-7 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000685 name: superficial abductor namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-70 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000563 ! pectoral fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000686 name: superficial grey and white zone namespace: zebrafish_anatomy synonym: "superficial grey and white zones" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-71 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000687 name: superficial pretectum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-72 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000418 ! pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000688 name: olfactory support cell namespace: zebrafish_anatomy synonym: "support cells" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-73 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0000689 name: supracommissural nucleus of V namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-74 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000304 ! ventral telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000690 name: supraoptic commissure namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-75 is_a: ZFA:0000338 ! diencephalic tracts and commissures relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000691 name: supraorbital bone namespace: zebrafish_anatomy def: "Paired dermal bones that form the anterodorsal margin of the orbit." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-76 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001410 ! orbital region relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000692 name: symplectic namespace: zebrafish_anatomy def: "The symplectic is an irregularly rod-shaped cartilage replacement bone articulating with the hyomandibular and quadrate." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-77 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001422 ! hyosymplectic cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001401 ! dorsal hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000693 name: tangential nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-78 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000401 ! octaval nerve sensory nucleus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000694 name: ceratobranchial 5 tooth namespace: zebrafish_anatomy def: "The tips of the ceratobranchial5 teeth form before the ceratobranchial itself (3.0 mm NL). As they grow ventrally, they meet the perichondrally ossified surface of ceratobranchial5 and become firmly ankylosed to the bone. Ceratobranchial teeth are the only teeth present in zebrafish and other cypriniforms." [ZFIN:curator] synonym: "pharyngeal teeth" RELATED [] synonym: "teeth" RELATED [] synonym: "tooth" RELATED [] xref: ZFIN:ZDB-ANAT-011113-79 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005138 ! dental organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000056 ! pharynx relationship: part_of ZFA:0001239 ! ceratobranchial 5 bone relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0000695 name: labial cavities namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-8 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000696 name: telencephalic ventricle namespace: zebrafish_anatomy synonym: "lateral ventricle" RELATED [] synonym: "telencephalic vesicle" RELATED [] xref: ZFIN:ZDB-ANAT-011113-80 relationship: develops_from ZFA:0001259 ! forebrain ventricle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000079 ! telencephalon relationship: part_of ZFA:0001261 ! ventricular system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000697 name: cranial nerve V namespace: zebrafish_anatomy synonym: "CN-V" RELATED [] synonym: "trigeminal nerve" RELATED [] xref: ZFIN:ZDB-ANAT-011113-81 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000698 name: tripus namespace: zebrafish_anatomy def: "The fourth Weberian ossicle. The tripus is a complex modification of the parapophysis and rib of the third vertebra. Anteriorly it attaches to the interosseus ligament and posteriorly it extends as a transformator process embedded in the tunica externa of the swimbladder. Bird and Mabee, 2003." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-82 is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001169 ! vertebra 3 relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0000699 name: ural ossification namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-83 is_obsolete: true [Term] id: ZFA:0000700 name: utricle namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-84 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000559 ! otolith organ relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000701 name: ventral arrector namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-85 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000563 ! pectoral fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000702 name: ventral horn spinal cord namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-86 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000703 name: ventral motor nucleus trigeminal nerve namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-87 is_a: ZFA:0001365 ! trigeminal motor nuclei relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000704 name: ventral pelvic arrector namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-88 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000258 ! pelvic fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000705 name: ventral root namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-89 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000706 name: posterior intestine namespace: zebrafish_anatomy def: "The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates. Wallace et al, 2005." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-011113-9 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001338 ! intestine relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000707 name: ventral zone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-90 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000392 ! median tuberal portion relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000708 name: ventrolateral optic tract namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-91 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000252 ! optic tract relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000709 name: vestibulo-spinal tract namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-92 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000710 name: viscerosensory commissural nucleus of Cajal namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-93 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000711 name: DEL namespace: zebrafish_anatomy def: "A multilayer of deep cells of fairly uniform thickness that forms during early epiboly (at dome stage; upon conversion of the blastodisc to the blastoderm); during gastrulation the DEL (deep cell layer) gives rise to the epiblast and hypoblast. Kimmel et al, 1995." [ZFIN:curator] synonym: "deep cell layer" RELATED [ZFIN:ZDB-PUB-961014-576] synonym: "DEL cells" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-011113-94 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001473 ! deep blastomere relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0001176 ! blastoderm relationship: start ZFS:0000016 ! Blastula:30%-epiboly [Term] id: ZFA:0000712 name: I-YSL namespace: zebrafish_anatomy def: "The portion of the YSL that lies deep to the blastoderm during epiboly. Kimmel et al, 1995." [ZFIN:curator] synonym: "internal yolk syncytial layer" RELATED [ZFIN:ZDB-PUB-961014-576] xref: ZFIN:ZDB-ANAT-011113-95 relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: part_of ZFA:0000088 ! YSL relationship: start ZFS:0000013 ! Blastula:Oblong [Term] id: ZFA:0000713 name: abducens motor nuclei namespace: zebrafish_anatomy synonym: "motor nucleus VI" RELATED [] synonym: "nVI" RELATED [] xref: ZFIN:ZDB-ANAT-011113-96 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000714 name: accessory pretectal nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-97 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000183 ! central pretectum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000715 name: adductor hyohyoid namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-98 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000716 name: afferent branchial artery namespace: zebrafish_anatomy synonym: "ABA" RELATED [] xref: ZFIN:ZDB-ANAT-011113-99 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000354 ! gill relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000717 name: apical ectodermal ridge median fin fold namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-1 relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000040 ! median fin fold relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000718 name: epaxial region somite 27 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-10 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000719 name: slow muscle cell somite 21 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 21" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-100 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000720 name: slow muscle cell somite 24 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 24" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-101 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000721 name: slow muscle cell somite 27 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 27" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-102 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000722 name: slow muscle cell somite 3 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 3" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-103 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000723 name: slow muscle cell somite 5 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 5" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-104 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000724 name: slow muscle cell somite 8 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 8" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-105 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000725 name: somite 11 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-106 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000726 name: somite 14 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-107 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000727 name: somite 17 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-108 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000728 name: somite 2 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-109 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000729 name: epaxial region somite 3 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-11 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000730 name: somite 23 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-110 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000731 name: somite 27 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-111 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000732 name: somite 3 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-112 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000733 name: somite 7 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-113 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000734 name: preural vertebra namespace: zebrafish_anatomy def: "Vertebra which are the three most posterior vertebra supporting the caudal fin." [ZFIN:curator] synonym: "caudal fin vertebra" RELATED [] synonym: "specialized centra/vertebrae" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-114 is_a: ZFA:0000326 ! caudal vertebra relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000037 ! Larval:Day 5 [Term] id: ZFA:0000735 name: hemal postzygapophysis namespace: zebrafish_anatomy def: "Paired, ventromedially directed processes on the posterior ends of the centra, ligamentously joined to the hemal postzygapophyses of the immediately posterior vertebra. The most posterior caudal vertebrae lack hemal postzygapophyses." [ZFIN:curator] synonym: "haemal postzygapophysis" RELATED [] synonym: "hemal postygopophysis" RELATED [] synonym: "hemal postzygapophyses" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-060331-4 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000519 ! hemal arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000736 name: apical ectodermal ridge pectoral fin namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-116 relationship: develops_from ZFA:0000085 ! apical ectodermal ridge pectoral fin bud relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001161 ! pectoral fin relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0000737 name: cranium namespace: zebrafish_anatomy def: "Skeletal system which is part of the skull, including the splanchnocranium, chondrocranium, and dermatocranium." [ZFIN:curator] synonym: "cranial skeleton" RELATED [] xref: ZFIN:ZDB-ANAT-020309-117 is_a: ZFA:0000434 ! skeletal system relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001114 ! head relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000738 name: dorsal oblique extraocular muscle namespace: zebrafish_anatomy synonym: "dorsal oblique extraocular muscles" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-118 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000511 ! extraocular musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000739 name: epaxial region somite 11 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-119 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000740 name: epaxial region somite 5 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-12 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000741 name: epaxial region somite 14 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-120 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000742 name: epaxial region somite 17 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-121 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000743 name: epaxial region somite 2 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-122 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000744 name: epaxial region somite 22 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-123 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000745 name: epaxial region somite 25 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-124 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000746 name: epaxial region somite 28 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-125 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000747 name: epaxial region somite 30 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-126 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000748 name: epaxial region somite 6 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-127 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000749 name: epaxial region somite 9 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-128 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000750 name: fast muscle cell somite 10 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 10" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-129 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000751 name: epaxial region somite 8 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-13 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000752 name: fast muscle cell somite 13 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 13" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-130 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000753 name: fast muscle cell somite 16 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 16" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-131 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000754 name: fast muscle cell somite 19 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 19" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-132 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000755 name: fast muscle cell somite 21 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 21" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-133 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000756 name: fast muscle cell somite 24 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 24" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-134 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000757 name: fast muscle cell somite 27 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 27" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-135 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000758 name: fast muscle cell somite 3 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 3" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-136 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000759 name: fast muscle cell somite 5 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 5" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-137 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000760 name: fast muscle cell somite 8 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 8" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-138 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000761 name: basal plate midbrain namespace: zebrafish_anatomy synonym: "floor plate midbrain" RELATED [] synonym: "floorplate midbrain" RELATED [] xref: ZFIN:ZDB-ANAT-020309-139 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000128 ! midbrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000762 name: facio-acoustic neural crest namespace: zebrafish_anatomy def: "Cranial neural crest that gives rise to the facio-acoustic ganglion." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-14 is_a: ZFA:0001194 ! cranial neural crest relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000763 name: floor plate rhombomere 2 namespace: zebrafish_anatomy synonym: "floor plate r2" RELATED [] synonym: "floorplate r2" RELATED [] xref: ZFIN:ZDB-ANAT-020309-140 is_a: ZFA:0001258 ! floor plate hindbrain relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000764 name: floor plate rhombomere 5 namespace: zebrafish_anatomy synonym: "floor plate r5" RELATED [] synonym: "floorplate r5" RELATED [] xref: ZFIN:ZDB-ANAT-020309-141 is_a: ZFA:0001258 ! floor plate hindbrain relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000765 name: floor plate rhombomere 8 namespace: zebrafish_anatomy synonym: "floor plate r8" RELATED [] synonym: "floorplate r8" RELATED [] xref: ZFIN:ZDB-ANAT-020309-142 is_a: ZFA:0001258 ! floor plate hindbrain relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000766 name: granular layer valvula cerebelli namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-143 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000603 ! valvula cerebelli relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000767 name: hypaxial region somite 11 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-144 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000768 name: hypaxial region somite 14 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-145 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000769 name: hypaxial region somite 17 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-146 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000770 name: hypaxial region somite 2 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-147 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000771 name: hypaxial region somite 22 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-148 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000772 name: hypaxial region somite 25 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-149 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000773 name: fast muscle cell somite 12 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 12" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-15 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000774 name: hypaxial region somite 28 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-150 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000775 name: hypaxial region somite 30 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-151 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000776 name: hypaxial region somite 6 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-152 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000777 name: hypaxial region somite 9 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-153 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000778 name: interneuron spinal cord namespace: zebrafish_anatomy synonym: "interneurons spinal cord" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-154 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000779 name: lateral forebrain bundle telencephalon namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-155 is_a: ZFA:0000597 ! telencephalic tracts relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0007012 ! lateral forebrain bundle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000780 name: lateral wall diencephalon namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-156 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000781 name: lateral wall rhombomere 1 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-157 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000782 name: lateral wall rhombomere 4 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-158 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000783 name: lateral wall rhombomere 7 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-159 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000784 name: fast muscle cell somite 15 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 15" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-16 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000785 name: lateral wall telencephalon namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-160 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000079 ! telencephalon relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000786 name: medial migration pathway mesenchyme namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-161 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000787 name: mesenchyme derived from head neural crest namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-162 is_a: ZFA:0000113 ! head mesenchyme relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000788 name: mesenchyme dorsal fin namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-163 relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001173 ! dorsal fin relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000789 name: mesoderm pectoral fin bud namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-164 relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: part_of ZFA:0000141 ! pectoral fin bud relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000790 name: muscle pioneer somite 10 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 10" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-165 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001047 ! slow muscle cell somite 10 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000791 name: muscle pioneer somite 13 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 13" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-166 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001048 ! slow muscle cell somite 13 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000792 name: muscle pioneer somite 16 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 16" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-167 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001049 ! slow muscle cell somite 16 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000793 name: muscle pioneer somite 19 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 19" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-168 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001050 ! slow muscle cell somite 19 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000794 name: muscle pioneer somite 22 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 22" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-169 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000844 ! slow muscle cell somite 22 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000795 name: fast muscle cell somite 18 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 18" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-17 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000796 name: muscle pioneer somite 25 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 25" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-170 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000845 ! slow muscle cell somite 25 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000797 name: muscle pioneer somite 28 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 28" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-171 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000846 ! slow muscle cell somite 28 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000798 name: muscle pioneer somite 30 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 30" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-172 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000847 ! slow muscle cell somite 30 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000799 name: muscle pioneer somite 6 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 6" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-173 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000848 ! slow muscle cell somite 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000800 name: muscle pioneer somite 9 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 9" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-174 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000850 ! slow muscle cell somite 9 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000801 name: myotome somite 11 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-175 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000725 ! somite 11 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000802 name: myotome somite 15 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-176 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000852 ! somite 15 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000803 name: myotome somite 18 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-177 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000853 ! somite 18 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000804 name: myotome somite 20 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-178 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000156 ! somite 20 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000805 name: myotome somite 23 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-179 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000730 ! somite 23 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000806 name: fast muscle cell somite 20 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 20" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-18 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000807 name: myotome somite 26 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-180 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000074 ! somite 26 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000808 name: myotome somite 29 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-181 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000981 ! somite 29 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000809 name: myotome somite 4 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-182 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000857 ! somite 4 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000810 name: myotome somite 7 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-183 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000733 ! somite 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000811 name: neural crest diencephalon namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-184 is_a: ZFA:0001194 ! cranial neural crest relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000812 name: neural crest telencephalon namespace: zebrafish_anatomy def: "Cranial neural crest that is part of the telencephalon." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-185 is_a: ZFA:0001194 ! cranial neural crest relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000813 name: infraorbital lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the infraorbital lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "neuromast infraorbital" RELATED [] synonym: "neuromasts infraorbital" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-186 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000524 ! infraorbital lateral line relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0000814 name: opercular lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the opercular lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "neuromast opercular" RELATED [] synonym: "neuromasts opercular" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-187 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000424 ! opercular lateral line relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0000815 name: nucleus of the medial longitudinal fasciculus medulla oblongata namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-188 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000816 name: oral epithelium namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-189 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000590 ! oral region relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0000817 name: fast muscle cell somite 23 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 23" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-19 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000818 name: vagal neural crest namespace: zebrafish_anatomy def: "Vagal neural crest is adjacent to the first seven somites gives rise to both ganglionic and ectomesenchymal derivatives." [ZFIN:curator] synonym: "post-otic neural crest" RELATED [] xref: ZFIN:ZDB-ANAT-060816-2 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001024 ! trunk neural crest relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000819 name: postcommissural nucleus of V central entopeduncular nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-191 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000304 ! ventral telencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000820 name: presumptive neuron neural tube namespace: zebrafish_anatomy synonym: "presumptive neurons neural tube" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-192 relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: part_of ZFA:0001135 ! neural tube relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000821 name: primary neuron hindbrain namespace: zebrafish_anatomy synonym: "primary neurons hindbrain" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-195 relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000822 name: rhombomere 2 namespace: zebrafish_anatomy def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator] synonym: "r2" RELATED [] xref: ZFIN:ZDB-ANAT-020309-196 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001208 ! presumptive rhombomere 2 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000823 name: rhombomere 5 namespace: zebrafish_anatomy def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator] synonym: "r5" RELATED [] xref: ZFIN:ZDB-ANAT-020309-197 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001211 ! presumptive rhombomere 5 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000824 name: roof plate rhombomere 2 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-198 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: part_of ZFA:0001311 ! roof plate rhombomere relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000825 name: roof plate rhombomere 6 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-199 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0001311 ! roof plate rhombomere relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000826 name: central nucleus torus semicircularis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-2 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000599 ! torus semicircularis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000827 name: fast muscle cell somite 26 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 26" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-20 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000828 name: roof plate rhombomere 5 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-200 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: part_of ZFA:0001311 ! roof plate rhombomere relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000829 name: sclerotome somite 11 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-201 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000725 ! somite 11 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000830 name: sclerotome somite 14 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-202 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000726 ! somite 14 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000831 name: sclerotome somite 17 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-203 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000727 ! somite 17 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000832 name: sclerotome somite 2 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-204 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000728 ! somite 2 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000833 name: sclerotome somite 22 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-205 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000978 ! somite 22 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000834 name: sclerotome somite 25 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-206 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000980 ! somite 25 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000835 name: sclerotome somite 28 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-207 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000856 ! somite 28 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000836 name: sclerotome somite 30 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-208 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000157 ! somite 30 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000837 name: sclerotome somite 6 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-209 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000982 ! somite 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000838 name: fast muscle cell somite 29 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 29" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-21 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000839 name: sclerotome somite 9 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-210 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000983 ! somite 9 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000840 name: slow muscle cell somite 11 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 11" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-211 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000841 name: slow muscle cell somite 14 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 14" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-212 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000842 name: slow muscle cell somite 17 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 17" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-213 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000843 name: slow muscle cell somite 2 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 2" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-214 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000844 name: slow muscle cell somite 22 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 22" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-215 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000845 name: slow muscle cell somite 25 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 25" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-216 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000846 name: slow muscle cell somite 28 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 28" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-217 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000847 name: slow muscle cell somite 30 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 30" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-218 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000848 name: slow muscle cell somite 6 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 6" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-219 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000849 name: fast muscle cell somite 4 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 4" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-22 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000850 name: slow muscle cell somite 9 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 9" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-220 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000851 name: somite 12 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-221 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000852 name: somite 15 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-222 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000853 name: somite 18 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-223 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000854 name: somite 21 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-224 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000855 name: somite 24 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-225 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000856 name: somite 28 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-226 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000857 name: somite 4 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-227 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000858 name: somite 8 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-228 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000859 name: specialized hemal arch and spine namespace: zebrafish_anatomy synonym: "ha(pu)" RELATED [] synonym: "hemal arches (preural)" RELATED [ZFIN:ZDB-PUB-011008-1] synonym: "specialized haemal arch and spine" RELATED [] synonym: "specialized hemal arches and spines" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-229 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0000860 name: fast muscle cell somite 7 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 7" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-23 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000861 name: ventral oblique extraocular muscle namespace: zebrafish_anatomy synonym: "ventral oblique extraocular muscles" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-230 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000511 ! extraocular musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000862 name: caudal fin skeleton namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-231 is_a: ZFA:0001123 ! axial fin skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001058 ! caudal fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000863 name: dermal bone cranium namespace: zebrafish_anatomy def: "Cranial bones that are dermally derived." [ZFIN:curator] synonym: "dermatocranium" RELATED [] xref: ZFIN:ZDB-ANAT-020309-232 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000737 ! cranium relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000864 name: epaxial region somite 1 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-233 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000865 name: epaxial region somite 12 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-234 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000866 name: epaxial region somite 15 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-235 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000867 name: epaxial region somite 18 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-236 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000868 name: epaxial region somite 20 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-237 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000869 name: epaxial region somite 23 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-238 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000870 name: epaxial region somite 26 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-239 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000871 name: floor plate diencephalon namespace: zebrafish_anatomy synonym: "floorplate diencephalon" RELATED [] xref: ZFIN:ZDB-ANAT-020309-24 is_a: ZFA:0000022 ! floor plate relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000872 name: epaxial region somite 29 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-240 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000873 name: epaxial region somite 4 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-241 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000874 name: epaxial region somite 7 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-242 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000875 name: facial neural crest namespace: zebrafish_anatomy def: "Cranial neural crest that is part of the facial region." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-243 is_a: ZFA:0001194 ! cranial neural crest relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000876 name: fast muscle cell somite 11 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 11" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-244 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000877 name: fast muscle cell somite 14 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 14" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-245 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000878 name: fast muscle cell somite 17 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 17" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-246 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000879 name: fast muscle cell somite 2 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 2" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-247 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000880 name: fast muscle cell somite 22 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 22" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-248 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000881 name: fast muscle cell somite 25 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 25" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-249 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000882 name: floor plate rhombomere 1 namespace: zebrafish_anatomy synonym: "floor plate r1" RELATED [] xref: ZFIN:ZDB-ANAT-020309-25 is_a: ZFA:0001258 ! floor plate hindbrain relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000883 name: fast muscle cell somite 28 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 28" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-250 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000884 name: fast muscle cell somite 30 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 30" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-251 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000885 name: fast muscle cell somite 6 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 6" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-252 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000886 name: fast muscle cell somite 9 namespace: zebrafish_anatomy synonym: "fast muscle cells somite 9" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-253 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000887 name: floor plate neural rod namespace: zebrafish_anatomy synonym: "floorplate neural rod" RELATED [] xref: ZFIN:ZDB-ANAT-020309-254 is_a: ZFA:0000022 ! floor plate relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000888 name: floor plate rhombomere 3 namespace: zebrafish_anatomy synonym: "floor plate r3" RELATED [] synonym: "floorplate r3" RELATED [] xref: ZFIN:ZDB-ANAT-020309-255 is_a: ZFA:0001258 ! floor plate hindbrain relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000889 name: floor plate rhombomere 6 namespace: zebrafish_anatomy synonym: "floor plate r6" RELATED [] synonym: "floorplate r6" RELATED [] xref: ZFIN:ZDB-ANAT-020309-256 is_a: ZFA:0001258 ! floor plate hindbrain relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000890 name: floor plate spinal cord namespace: zebrafish_anatomy synonym: "floorplate spinal cord" RELATED [] xref: ZFIN:ZDB-ANAT-020309-257 is_a: ZFA:0000022 ! floor plate relationship: develops_from ZFA:0001434 ! floor plate neural tube relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000891 name: hypaxial region somite 1 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-258 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000892 name: hypaxial region somite 12 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-259 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000893 name: floor plate rhombomere 4 namespace: zebrafish_anatomy synonym: "floor plate r4" RELATED [] synonym: "floorplate r4" RELATED [] xref: ZFIN:ZDB-ANAT-020309-26 is_a: ZFA:0001258 ! floor plate hindbrain relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000894 name: hypaxial region somite 15 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-260 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000895 name: hypaxial region somite 18 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-261 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000896 name: hypaxial region somite 20 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-262 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000897 name: hypaxial region somite 23 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-263 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000898 name: hypaxial region somite 26 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-264 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000899 name: hypaxial region somite 29 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-265 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000900 name: hypaxial region somite 4 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-266 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000901 name: hypaxial region somite 7 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-267 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000902 name: hypural musculature namespace: zebrafish_anatomy synonym: "hypural muscles" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-268 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000628 ! caudal fin musculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000903 name: interpeduncular nucleus tegmentum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-269 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000904 name: floor plate rhombomere 7 namespace: zebrafish_anatomy synonym: "floor plate r7" RELATED [] synonym: "floorplate r7" RELATED [] xref: ZFIN:ZDB-ANAT-020309-27 is_a: ZFA:0001258 ! floor plate hindbrain relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000905 name: lateral mesenchyme derived from mesoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-270 is_a: ZFA:0000081 ! trunk mesenchyme relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000906 name: lateral wall midbrain namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-271 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000128 ! midbrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000907 name: lateral wall rhombomere 2 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-272 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000908 name: lateral wall rhombomere 5 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-273 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000909 name: lateral wall rhombomere 8 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-274 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000910 name: medial forebrain bundle telencephalon namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-275 is_a: ZFA:0000597 ! telencephalic tracts relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005111 ! medial forebrain bundle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000911 name: medial pterygiophores dorsal fin namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-276 is_obsolete: true [Term] id: ZFA:0000912 name: mesenchyme median fin fold namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-278 is_a: ZFA:0000393 ! mesenchyme relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000040 ! median fin fold relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0000913 name: molecular layer valvula cerebelli namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-279 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000603 ! valvula cerebelli relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000914 name: floor plate telencephalon namespace: zebrafish_anatomy synonym: "floorplate telencephalon" RELATED [] xref: ZFIN:ZDB-ANAT-020309-28 is_a: ZFA:0000022 ! floor plate relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000079 ! telencephalon relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000915 name: muscle pioneer somite 11 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 11" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-280 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000840 ! slow muscle cell somite 11 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000916 name: muscle pioneer somite 14 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 14" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-281 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000841 ! slow muscle cell somite 14 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000917 name: muscle pioneer somite 17 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 17" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-282 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000842 ! slow muscle cell somite 17 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000918 name: muscle pioneer somite 20 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 20" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-283 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000967 ! slow muscle cell somite 20 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000919 name: muscle pioneer somite 23 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 23" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-284 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000969 ! slow muscle cell somite 23 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000920 name: muscle pioneer somite 26 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 26" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-285 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000970 ! slow muscle cell somite 26 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000921 name: muscle pioneer somite 29 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 29" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-286 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000971 ! slow muscle cell somite 29 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000922 name: muscle pioneer somite 4 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 4" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-287 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000972 ! slow muscle cell somite 4 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000923 name: muscle pioneer somite 7 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 7" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-288 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000973 ! slow muscle cell somite 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000924 name: myotome somite 1 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-289 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000072 ! somite 1 relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000925 name: hypaxial region somite 10 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-29 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000926 name: myotome somite 12 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-290 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000851 ! somite 12 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000927 name: myotome somite 16 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-291 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000976 ! somite 16 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000928 name: myotome somite 19 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-292 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000977 ! somite 19 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000929 name: myotome somite 21 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-293 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000854 ! somite 21 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000930 name: myotome somite 24 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-294 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000855 ! somite 24 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000931 name: myotome somite 27 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-295 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000731 ! somite 27 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000932 name: myotome somite 3 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-296 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000732 ! somite 3 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000933 name: myotome somite 5 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-297 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000073 ! somite 5 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000934 name: myotome somite 8 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-298 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000858 ! somite 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000935 name: neural crest midbrain namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-299 is_a: ZFA:0001194 ! cranial neural crest relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000936 name: dorsal fin distal radial namespace: zebrafish_anatomy def: "Rod-like internal median skeletal support bones of the dorsal fin, which articulate with the lepidotrichia distally." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-3 is_a: ZFA:0001647 ! dorsal fin radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001419 ! dorsal fin pterygiophore relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000937 name: hypaxial region somite 13 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-30 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000938 name: central canal namespace: zebrafish_anatomy synonym: "neural lumen" RELATED [] xref: ZFIN:ZDB-ANAT-020309-300 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: part_of ZFA:0001261 ! ventricular system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000939 name: middle lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the middle lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "neuromast middle" RELATED [] synonym: "neuromasts middle" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-301 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000344 ! middle lateral line relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0000940 name: posterior lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the posterior lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "neuromast posterior" RELATED [] synonym: "neuromasts posterior" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-302 is_a: ZFA:0000243 ! neuromast relationship: develops_from ZFA:0001157 ! posterior lateral line primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000944 ! posterior lateral line relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000941 name: nucleus of the medial longitudinal fasciculus synencephalon namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-303 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000293 ! synencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000943 name: pectoral fin skeleton namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-305 is_a: ZFA:0000027 ! paired fin skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001161 ! pectoral fin relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000944 name: posterior lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "pll" RELATED [] xref: ZFIN:ZDB-ANAT-020309-306 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0001157 ! posterior lateral line primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001471 ! posterior lateral line system relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0000946 name: hypaxial region somite 16 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-31 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000947 name: dorsal fin proximal radial namespace: zebrafish_anatomy def: "Rod-like internal median skeletal support bones of the dorsal fin, which articulate with the distal radials." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-310 is_a: ZFA:0001647 ! dorsal fin radial relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001419 ! dorsal fin pterygiophore relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000948 name: rhombomere 3 namespace: zebrafish_anatomy def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator] synonym: "r3" RELATED [] xref: ZFIN:ZDB-ANAT-020309-311 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001213 ! presumptive rhombomere 3 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000949 name: rhombomere 7 namespace: zebrafish_anatomy def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator] synonym: "r7" RELATED [] xref: ZFIN:ZDB-ANAT-020309-312 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001209 ! presumptive rhombomere 7 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000950 name: roof plate rhombomere 3 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-313 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0001311 ! roof plate rhombomere relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000951 name: roof plate rhombomere 7 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-314 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001311 ! roof plate rhombomere relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000952 name: sclerotome somite 1 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-315 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000072 ! somite 1 relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0000953 name: sclerotome somite 12 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-316 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000851 ! somite 12 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000954 name: sclerotome somite 15 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-317 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000852 ! somite 15 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000955 name: sclerotome somite 18 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-318 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000853 ! somite 18 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000956 name: sclerotome somite 20 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-319 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000156 ! somite 20 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000957 name: hypaxial region somite 19 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-32 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000958 name: sclerotome somite 23 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-320 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000730 ! somite 23 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000959 name: sclerotome somite 26 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-321 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000074 ! somite 26 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000960 name: sclerotome somite 29 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-322 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000981 ! somite 29 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000961 name: sclerotome somite 4 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-323 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000857 ! somite 4 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000962 name: sclerotome somite 7 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-324 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000733 ! somite 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000963 name: slow muscle cell somite 1 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 1" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-325 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000964 name: slow muscle cell somite 12 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 12" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-326 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000965 name: slow muscle cell somite 15 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 15" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-327 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000966 name: slow muscle cell somite 18 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 18" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-328 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000967 name: slow muscle cell somite 20 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 20" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-329 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000968 name: hypaxial region somite 21 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-33 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000969 name: slow muscle cell somite 23 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 23" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-330 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000970 name: slow muscle cell somite 26 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 26" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-331 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000971 name: slow muscle cell somite 29 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 29" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-332 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000972 name: slow muscle cell somite 4 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 4" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-333 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000973 name: slow muscle cell somite 7 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 7" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-334 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000974 name: somite 10 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-335 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000975 name: somite 13 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-336 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0000976 name: somite 16 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-337 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000977 name: somite 19 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-338 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0000978 name: somite 22 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-339 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000979 name: hypaxial region somite 24 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-34 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000980 name: somite 25 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-340 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0000981 name: somite 29 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-341 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000982 name: somite 6 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-342 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000983 name: somite 9 namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-343 is_a: ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000984 name: superior reticular formation tegmentum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-344 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000160 ! tegmentum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000985 name: ventral rhombencephalic commissure medulla oblongata namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-345 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000986 name: hypaxial region somite 27 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-35 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000987 name: hypaxial region somite 3 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-36 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000988 name: hypaxial region somite 5 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-37 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000989 name: hypaxial region somite 8 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-38 is_a: ZFA:0001085 ! hypaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000990 name: intermediate mesenchyme namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-39 is_a: ZFA:0000081 ! trunk mesenchyme relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000991 name: epaxial region somite 10 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-4 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000992 name: lateral migration pathway mesenchyme namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-41 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000993 name: lateral wall neural rod namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-42 relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000994 name: lateral wall rhombomere 3 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-43 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000995 name: lateral wall rhombomere 6 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-44 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0000996 name: lateral wall spinal cord namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-45 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0000997 name: medial funicular nucleus trigeminal nuclei namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-46 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000433 ! sensory trigeminal nuclei relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0000998 name: mesenchyme derived from head mesoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-47 is_a: ZFA:0000113 ! head mesenchyme relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0000999 name: mesenchyme derived from trunk neural crest namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-48 is_a: ZFA:0000081 ! trunk mesenchyme relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001000 name: mesenchyme pectoral fin namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-49 is_a: ZFA:0000393 ! mesenchyme relationship: develops_from ZFA:0000789 ! mesoderm pectoral fin bud relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001161 ! pectoral fin relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001001 name: epaxial region somite 13 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-5 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001002 name: motor axons peripheral namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-50 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001003 name: muscle pioneer somite 12 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 12" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-51 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000964 ! slow muscle cell somite 12 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001004 name: muscle pioneer somite 15 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 15" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-52 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000965 ! slow muscle cell somite 15 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001005 name: muscle pioneer somite 18 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 18" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-53 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000966 ! slow muscle cell somite 18 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001006 name: muscle pioneer somite 21 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 21" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-54 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000719 ! slow muscle cell somite 21 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001007 name: muscle pioneer somite 24 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 24" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-55 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000720 ! slow muscle cell somite 24 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001008 name: muscle pioneer somite 27 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 27" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-56 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000721 ! slow muscle cell somite 27 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001009 name: muscle pioneer somite 3 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 3" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-57 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000722 ! slow muscle cell somite 3 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001010 name: muscle pioneer somite 5 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 5" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-58 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000723 ! slow muscle cell somite 5 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001011 name: muscle pioneer somite 8 namespace: zebrafish_anatomy synonym: "muscle pioneers somite 8" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-59 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000724 ! slow muscle cell somite 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001012 name: epaxial region somite 16 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-6 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001013 name: myotome somite 10 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-60 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000974 ! somite 10 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001014 name: myotome somite 13 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-61 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000975 ! somite 13 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001015 name: myotome somite 17 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-62 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000727 ! somite 17 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001016 name: myotome somite 2 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-63 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000728 ! somite 2 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001017 name: myotome somite 22 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-64 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000978 ! somite 22 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001018 name: myotome somite 25 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-65 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000980 ! somite 25 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001019 name: myotome somite 28 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-66 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000856 ! somite 28 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001020 name: myotome somite 30 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-67 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000157 ! somite 30 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001021 name: myotome somite 6 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-68 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000982 ! somite 6 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001022 name: myotome somite 9 namespace: zebrafish_anatomy def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-69 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000983 ! somite 9 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001023 name: epaxial region somite 19 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-7 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001024 name: trunk neural crest namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-70 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000045 ! neural crest relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001025 name: occipital lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the occipital lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "neuromast occipital" RELATED [] synonym: "neuromasts occipital" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-72 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000400 ! occipital lateral line relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0001026 name: supraorbital lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the supraorbital lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "neuromast supraorbital" RELATED [] synonym: "neuromasts supraorbital" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-73 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000443 ! supraorbital lateral line relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0001027 name: oral cavity namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-74 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000590 ! oral region relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001028 name: hypurapophysis namespace: zebrafish_anatomy def: "The paired bony lateral extensions off the parhypural. Mabee and Bird, 2001." [ZFIN:curator] synonym: "hypurapophyses" RELATED PLURAL [] synonym: "parhypurapophyses" RELATED [] synonym: "parhypurapophyses processes" RELATED [] xref: ZFIN:ZDB-ANAT-020309-75 is_a: ZFA:0000859 ! specialized hemal arch and spine relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000438 ! parhypural relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001029 name: inner limiting membrane namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061101-7 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001030 name: epaxial region somite 21 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-8 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001031 name: rhombomere 1 namespace: zebrafish_anatomy def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator] synonym: "r1" RELATED [] xref: ZFIN:ZDB-ANAT-020309-81 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001207 ! presumptive rhombomere 1 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001032 name: rhombomere 4 namespace: zebrafish_anatomy def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator] synonym: "r4" RELATED [] xref: ZFIN:ZDB-ANAT-020309-82 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001212 ! presumptive rhombomere 4 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001033 name: roof plate rhombomere 1 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-83 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001311 ! roof plate rhombomere relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001034 name: roof plate rhombomere 4 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-84 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001311 ! roof plate rhombomere relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001035 name: roof plate rhombomere 8 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020309-85 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0001311 ! roof plate rhombomere relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001036 name: sclerotome somite 10 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-86 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000974 ! somite 10 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001037 name: sclerotome somite 13 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-87 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000975 ! somite 13 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001038 name: sclerotome somite 16 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-88 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000976 ! somite 16 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001039 name: sclerotome somite 19 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-89 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000977 ! somite 19 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001040 name: epaxial region somite 24 namespace: zebrafish_anatomy def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-9 is_a: ZFA:0001084 ! epaxial myotome region relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001041 name: sclerotome somite 21 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-90 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000854 ! somite 21 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001042 name: sclerotome somite 24 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-91 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000855 ! somite 24 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001043 name: sclerotome somite 27 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-92 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000731 ! somite 27 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001044 name: sclerotome somite 3 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-93 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000732 ! somite 3 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001045 name: sclerotome somite 5 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-94 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000073 ! somite 5 relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001046 name: sclerotome somite 8 namespace: zebrafish_anatomy def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020309-95 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000858 ! somite 8 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001047 name: slow muscle cell somite 10 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 10" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-96 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001048 name: slow muscle cell somite 13 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 13" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-97 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001049 name: slow muscle cell somite 16 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 16" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-98 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001050 name: slow muscle cell somite 19 namespace: zebrafish_anatomy synonym: "slow muscle cells somite 19" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020309-99 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001051 name: caudal division of the internal carotid artery namespace: zebrafish_anatomy synonym: "CaDI" RELATED [] xref: ZFIN:ZDB-ANAT-020702-1 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005081 ! internal carotid artery relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001052 name: primordial hindbrain channel namespace: zebrafish_anatomy def: "The paired vessels that run along the lateral walls of the hindbrain and drain into the anterior cardinal veins. Isogai et al. (2002)" [ZFIN:curator] synonym: "medial head vein" RELATED [] synonym: "PHCB" RELATED [] xref: ZFIN:ZDB-ANAT-020702-10 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001267 ! cranial vasculature relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001053 name: primitive internal carotid artery namespace: zebrafish_anatomy synonym: "PICA" RELATED [] xref: ZFIN:ZDB-ANAT-020702-11 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001054 name: lateral dorsal aorta namespace: zebrafish_anatomy def: "Connect the outflow of the aortic arches to the dorsal aorta. The place where the lateral dorsal aorta fuse is is called the radiax of the aorta. Isogai et al. 2001." [ZFIN:curator] synonym: "LDA" RELATED [] xref: ZFIN:ZDB-ANAT-020702-12 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001055 name: pronephric duct opening namespace: zebrafish_anatomy def: "The juncture where the pronephric ducts empty into the cloaca." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-020702-13 relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000150 ! pronephric duct relationship: part_of ZFA:0000330 ! cloacal chamber relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001056 name: myotome namespace: zebrafish_anatomy def: "Portion of the somites giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator] synonym: "myomeres" RELATED [ZFIN:ZDB-PUB-961014-576] xref: ZFIN:ZDB-ANAT-020702-14 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000155 ! somite relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000473 ! trunk musculature relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0001057 name: intersegmental vein namespace: zebrafish_anatomy def: "Primary intersegmental vessels that are contacted by secondary angiogenic sprouts from the posterior cardinal vein and take on the characteristics of veins. These eventually link with other secondary sprouts from the posterior cardinal vein to form the parachordal vessel. Isogai et al. 2003.'" [ZFIN:curator] synonym: "ISV" RELATED [] xref: ZFIN:ZDB-ANAT-020702-15 is_a: ZFA:0000082 ! vein is_a: ZFA:0001285 ! intersegmental vessel relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0001058 name: caudal fin namespace: zebrafish_anatomy def: "The caudal fin is the most posterior median fin. It is composed of a complex of three modified centra and modified neural and hemal arches and spines. Mabee and Bird, 2001." [ZFIN:curator] synonym: "tail" RELATED [] synonym: "tail fin" RELATED [] xref: ZFIN:ZDB-ANAT-020702-16 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0001069 ! ventral fin fold relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001117 ! post-vent region relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001059 name: cranial division of the internal carotid artery namespace: zebrafish_anatomy synonym: "CrDI" RELATED [] synonym: "rostral division of the internal carotid artery" RELATED [] xref: ZFIN:ZDB-ANAT-020702-17 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0005081 ! internal carotid artery relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001060 name: basidorsal namespace: zebrafish_anatomy def: "Basidorsals are bilaterally paired cartilages on the dorsolateral side of the notochord which are replaced by ossified neural arches or dorsal arcocentra. In otophysan fishes, basidorsal 1, bd2, bd3, and bd4 give rise to parts of the Weberian apparatus." [ZFIN:curator] synonym: "arcualia" RELATED [] xref: ZFIN:ZDB-ANAT-060331-5 is_a: ZFA:0001457 ! postcranial axial cartilage relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001061 name: intersegmental artery namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020702-19 is_a: ZFA:0000005 ! artery is_a: ZFA:0001285 ! intersegmental vessel relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0001062 name: primitive mesencephalic artery namespace: zebrafish_anatomy def: "Branches dorsally from the cranial division of the internal carotid artery, then curves caudally along the dorsal medial wall of the eye capsule to drain into the PMBC just rostral to the midbrain hindbrain boundary" [ZFIN:curator] synonym: "PMsA" RELATED [] xref: ZFIN:ZDB-ANAT-020702-2 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001063 name: posterior caudal vein namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020702-20 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0005037 ! tail vasculature relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001064 name: rhombomere namespace: zebrafish_anatomy def: "A segment of the developing hindbrain. Kimmel et al, 1995." [ZFIN:curator] synonym: "hindbrain segment" RELATED [] synonym: "neuromeres" RELATED [] synonym: "rhombomeres" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-020702-3 is_a: ZFA:0001328 ! neuromere relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000029 ! hindbrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001065 name: lateral mesoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-020702-4 relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: part_of ZFA:0000041 ! mesoderm relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001066 name: neural arch namespace: zebrafish_anatomy def: "A neural arch encloses the neural canal and typically meets its partner to form a neural spine. The neural arch can be a replacement ossification of the basidorsal cartilage or can form directly in membrane bone." [ZFIN:curator] synonym: "dorsal arcocentrum" RELATED [] xref: ZFIN:ZDB-ANAT-060331-6 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001060 ! basidorsal relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001189 ! vertebra relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001067 name: anterior cerebral vein namespace: zebrafish_anatomy synonym: "ACeV" RELATED [] synonym: "rostral cerebral vein" RELATED [] xref: ZFIN:ZDB-ANAT-020702-6 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001267 ! cranial vasculature relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001068 name: mesencephalic artery namespace: zebrafish_anatomy def: "Develops from the proximal portion of the primitive mesencephalic artery. Isogai et al.2001." [ZFIN:curator] synonym: "MsA" RELATED [] xref: ZFIN:ZDB-ANAT-020702-7 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0001062 ! primitive mesencephalic artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001069 name: ventral fin fold namespace: zebrafish_anatomy synonym: "tail fin fold" RELATED [] synonym: "ventral fin" RELATED [] xref: ZFIN:ZDB-ANAT-020702-8 relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000040 ! median fin fold relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001070 name: presumptive pronephric mesoderm namespace: zebrafish_anatomy synonym: "nephron primordium" RELATED [] xref: ZFIN:ZDB-ANAT-020702-9 relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0001206 ! intermediate mesoderm relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001071 name: presumptive retina namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-030922-1 relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0000050 ! optic vesicle relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001072 name: thyroid follicle namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-030922-10 relationship: develops_from ZFA:0001081 ! thyroid primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001158 ! endocrine system relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001073 name: axial vasculature namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-030922-11 is_a: ZFA:0001079 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001074 name: taste bud namespace: zebrafish_anatomy synonym: "taste buds" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-030922-12 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001101 ! gustatory system relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001075 name: choroid fissure namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-030922-13 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001076 name: intestinal bulb namespace: zebrafish_anatomy def: "This anteriormost portion of the intestine has the most digestive enzymes and the greatest epithelial surface area. Wallace et al, 2005." [ZFIN:curator] synonym: "anterior intestine" RELATED [] xref: ZFIN:ZDB-ANAT-030922-14 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001338 ! intestine relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001077 name: thymus primordium namespace: zebrafish_anatomy def: "A small outgrowth of the pharyngeal epithelium that is the site of lymphocyte cell production. Willett et al, 1999." [ZFIN:curator] synonym: "thymic rudiment" RELATED [] xref: ZFIN:ZDB-ANAT-030922-2 relationship: develops_from ZFA:0000818 ! vagal neural crest relationship: develops_from ZFA:0001104 ! pharyngeal endoderm relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001159 ! immune system relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001078 name: thymus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-030922-3 relationship: develops_from ZFA:0001077 ! thymus primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001159 ! immune system relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001079 name: vasculature namespace: zebrafish_anatomy synonym: "blood vessels" RELATED [] synonym: "circulatory system" RELATED [] xref: ZFIN:ZDB-ANAT-030922-4 is_a: ZFA:0001490 ! cavitated compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000010 ! cardiovascular system relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001080 name: sclerotome namespace: zebrafish_anatomy synonym: "sclerotomes" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-030922-5 relationship: develops_from ZFA:0000155 ! somite relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0001081 name: thyroid primordium namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-030922-6 relationship: develops_from ZFA:0001104 ! pharyngeal endoderm relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: part_of ZFA:0001158 ! endocrine system relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001082 name: chordo neural hinge namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-030922-7 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000135 ! notochord relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0001083 name: ventricular zone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-030922-8 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001261 ! ventricular system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001084 name: epaxial myotome region namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-031211-12 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001056 ! myotome relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001085 name: hypaxial myotome region namespace: zebrafish_anatomy synonym: "hypaxial muscle" RELATED [] xref: ZFIN:ZDB-ANAT-031211-13 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0001056 ! myotome relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001086 name: muscle pioneer namespace: zebrafish_anatomy synonym: "muscle pioneers" RELATED PLURAL [] synonym: "non migratory adaxial cells" RELATED [] xref: ZFIN:ZDB-ANAT-031211-14 relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0009116 ! slow muscle cell relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001089 name: myoseptum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-031211-5 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001056 ! myotome relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0001093 name: unspecified namespace: zebrafish_anatomy def: "Annotation with this anatomy term indicates that a structure was not specified by the author." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-041102-1 is_a: ZFA:0100000 ! zebrafish anatomical entity relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0001094 name: whole organism namespace: zebrafish_anatomy def: "Anatomical structure that is an individual member of Danio rerio." [ZFIN:curator] synonym: "multi-cellular organism" RELATED [] xref: CARO:0000003 xref: ZFIN:ZDB-ANAT-050228-1 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0001095 name: immature macula namespace: zebrafish_anatomy synonym: "immature maculae" RELATED PLURAL [] synonym: "immature sensory patch" RELATED [] synonym: "immature sensory patches" RELATED [] xref: ZFIN:ZDB-ANAT-050228-10 relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0000051 ! otic vesicle relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001096 name: immature anterior macula namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-11 relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0001095 ! immature macula relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001097 name: immature posterior macula namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-12 relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0001095 ! immature macula relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001098 name: immature hair cell anterior macula namespace: zebrafish_anatomy synonym: "immature sensory hair cells anterior macula" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-050228-13 is_a: ZFA:0009366 ! hair cell relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0001096 ! immature anterior macula relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001099 name: immature hair cell posterior macula namespace: zebrafish_anatomy synonym: "immature sensory hair cells posterior macula" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-050228-14 is_a: ZFA:0009366 ! hair cell relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0001097 ! immature posterior macula relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001100 name: hepatic duct namespace: zebrafish_anatomy def: "A duct that carries bile from the liver to the small intestine. Crump et al, 2004." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-20 relationship: develops_from ZFA:0001104 ! pharyngeal endoderm relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000056 ! pharynx relationship: part_of ZFA:0001306 ! pharyngeal arch relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001107 name: internal gill bud namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-21 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000056 ! pharynx relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0001108 name: anterior commissure namespace: zebrafish_anatomy synonym: "commissura anterior" RELATED [] synonym: "commissura rostral" RELATED [] synonym: "rostral commissure" RELATED [] xref: ZFIN:ZDB-ANAT-050228-22 is_a: ZFA:0000597 ! telencephalic tracts relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001109 name: oocyte namespace: zebrafish_anatomy synonym: "egg" RELATED [] xref: ZFIN:ZDB-ANAT-050228-23 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001110 ! ovarian follicle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001110 name: ovarian follicle namespace: zebrafish_anatomy def: "Oocyte development of zebrafish has been divided into five stages based on morphological criteria and on physiological and biochemical events. Stage I follicles (less than 140 microns) are primary growth stage, stage II follicles (140-340 microns) are cortical alveolus stage, stage III (340-690 microns) are vitellogenesis, stage IV (690-730 microns) are oocyte maturation, and stage V follicles are matured egg.Selman et al, 1993." [ZFIN:curator] synonym: "egg follicle" RELATED [] xref: ZFIN:ZDB-ANAT-050228-24 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000403 ! ovary relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001111 name: zona radiata namespace: zebrafish_anatomy synonym: "vitelline envelope" RELATED [] xref: ZFIN:ZDB-ANAT-050228-25 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001110 ! ovarian follicle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001112 name: granulosa cell layer namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-26 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001110 ! ovarian follicle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001113 name: thecal cell layer namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-27 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001110 ! ovarian follicle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001114 name: head namespace: zebrafish_anatomy def: "Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-28 is_a: ZFA:0001308 ! organism subdivision relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001115 name: trunk namespace: zebrafish_anatomy def: "Organism subdivision which is the part of the body posterior to the head and anterior to the tail." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-29 is_a: ZFA:0001308 ! organism subdivision relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001116 name: presumptive structure namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-3 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0001117 name: post-vent region namespace: zebrafish_anatomy def: "Organism subdivision which is the part of the body posterior to the vent which includes the anal and caudal fins." [ZFIN:curator] synonym: "tail" RELATED [] xref: ZFIN:ZDB-ANAT-050228-30 is_a: ZFA:0001308 ! organism subdivision relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001118 name: urogenital papilla namespace: zebrafish_anatomy def: "A protuberance in front of the gential pore and behind the vent. Mature females have a well developed urogenital papillae whilst in mature males it is poorly developed. Brion et al, 2004." [ZFIN:curator] synonym: "anal papilla" RELATED [] synonym: "anal papillae" RELATED [] synonym: "genital papilla" RELATED [] synonym: "UGP" RELATED [] synonym: "urogenital papillae" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-050228-31 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000632 ! reproductive system relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001119 name: dermis namespace: zebrafish_anatomy def: "A collagenous layer of the skin subjacent to the epidermis and covering the hypodermis. It contains various types of cells (e.g. fibroblasts, pigment cells, nerve, blood vessels and scales. Le Guellec et al, 2004." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-32 relationship: develops_from ZFA:0000255 ! paraxial mesoderm relationship: develops_from ZFA:0000787 ! mesenchyme derived from head neural crest relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001120 name: neuroectoderm namespace: zebrafish_anatomy synonym: "neural ectoderm" RELATED [] synonym: "neurectoderm" RELATED [] xref: ZFIN:ZDB-ANAT-050228-33 relationship: end ZFS:0000038 ! Larval:Day 6 relationship: part_of ZFA:0000016 ! ectoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001121 name: presumptive shield namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-34 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000018 ! Gastrula:Germ-ring relationship: start ZFS:0000016 ! Blastula:30%-epiboly [Term] id: ZFA:0001122 name: primary germ layer namespace: zebrafish_anatomy synonym: "embryonic germ layers" RELATED [] xref: ZFIN:ZDB-ANAT-050228-35 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000038 ! Larval:Day 6 relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001123 name: axial fin skeleton namespace: zebrafish_anatomy synonym: "unpaired fin skeleton" RELATED [] xref: ZFIN:ZDB-ANAT-050228-36 is_a: ZFA:0000317 ! postcranial axial skeleton relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001124 name: dorsal fin skeleton namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-37 is_a: ZFA:0001123 ! axial fin skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001173 ! dorsal fin relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001125 name: organizer inducing center namespace: zebrafish_anatomy def: "The dorsal marginal region of the YSL where maternal dorsal determinants localize. Participates in positioning the shield. Ho et al, 1999." [ZFIN:curator] synonym: "Nieuwkoop center" RELATED [] xref: ZFIN:ZDB-ANAT-050228-38 relationship: end ZFS:0000019 ! Gastrula:Shield relationship: part_of ZFA:0000088 ! YSL relationship: start ZFS:0000012 ! Blastula:High [Term] id: ZFA:0001126 name: noninvoluting endocytic marginal cell cluster namespace: zebrafish_anatomy def: "The NEM cell cluster lies in a superficial position of the dorsal blastoderm margin encompassing EVL cells and one or two layers of underlying deep cells. Unlike other marginal blastomeres, cells in this cluster do not participate in involution. Cooper et al, 1996." [ZFIN:curator] synonym: "NEM" RELATED [] synonym: "noninvoluting endocytic marginal cells" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-050228-39 relationship: end ZFS:0000017 ! Gastrula:50%-epiboly relationship: part_of ZFA:0000038 ! margin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001127 name: visual system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-4 is_a: ZFA:0000282 ! sensory system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001128 name: pharyngeal pouch 1 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-40 is_a: ZFA:0001106 ! pharyngeal pouch relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001129 name: pharyngeal pouches 2-6 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-41 is_a: ZFA:0001106 ! pharyngeal pouch relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001130 name: pharyngeal pouch 2 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-42 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001131 name: pharyngeal pouch 3 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-43 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001132 name: pharyngeal pouch 6 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-44 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001133 name: pharyngeal pouch 5 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-45 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001134 name: pharyngeal pouch 4 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-46 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001135 name: neural tube namespace: zebrafish_anatomy synonym: "presumptive central nervous system" RELATED [] xref: ZFIN:ZDB-ANAT-050228-47 is_a: ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0000133 ! neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001136 name: hypodermis namespace: zebrafish_anatomy def: "A layer separating the inner face of the dermis from the subjacent muscle cells. It is covered on both sides by a basement membrane. It contains pigment cells. Le Guellec et al, 2004." [ZFIN:curator] synonym: "subcutis" RELATED [] xref: ZFIN:ZDB-ANAT-050228-48 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001137 name: ventral tooth row namespace: zebrafish_anatomy def: "Tooth row that is the ventralmost row of teeth on ceratobranchial 5 bone." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-49 is_a: ZFA:0001642 ! tooth row relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001138 name: vestibuloauditory system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-5 is_a: ZFA:0000282 ! sensory system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001139 name: mediodorsal tooth row namespace: zebrafish_anatomy def: "Tooth row that is the mediodorsal row of teeth on ceratobranchial 5 bone, located between the dorsal tooth row and ventral tooth row." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-50 is_a: ZFA:0001642 ! tooth row relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001140 name: dorsal tooth row namespace: zebrafish_anatomy def: "Tooth row that is the dorsalmost row of teeth on ceratobranchial 5 bone." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-51 is_a: ZFA:0001642 ! tooth row relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001141 name: tooth 1V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the ventral tooth row." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-52 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001137 ! ventral tooth row relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001142 name: tooth 5V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the ventral tooth row." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-53 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001137 ! ventral tooth row relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001143 name: tooth 4V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 3V and anterior to tooth 5V in the ventral tooth row." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-54 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001137 ! ventral tooth row relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001144 name: tooth 2V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 1V and anterior to tooth 3V in the ventral tooth row." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-55 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001137 ! ventral tooth row relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001145 name: tooth 3V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 2V and anterior to tooth 4V in the ventral tooth row." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-56 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001137 ! ventral tooth row relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001146 name: tooth 1MD namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the mediodorsal tooth row." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-57 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001147 name: tooth 2MD namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 1MD and anterior to tooth 3MD in the mediodorsal tooth row." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-58 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001148 name: tooth 1D namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the dorsal tooth row." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-59 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001140 ! dorsal tooth row relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001149 name: olfactory system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-6 is_a: ZFA:0000282 ! sensory system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001150 name: tooth 2D namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the dorsal tooth row." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-60 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001140 ! dorsal tooth row relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001151 name: tooth 4MD namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the mediodorsal tooth row." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-61 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001152 name: tooth 3MD namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 2MD and anterior to tooth 4MD in the mediodorsal tooth row." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050228-62 is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001153 name: tooth placode namespace: zebrafish_anatomy def: "Placode that develops into a tooth. The placode is a thickening of the pharyngeal epithelium." [ZFIN:curator] synonym: "dental primordium" RELATED [] synonym: "tooth germ" RELATED [] xref: ZFIN:ZDB-ANAT-050228-63 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001174 ! pharyngeal epithelium relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001154 name: anal fin musculature namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-64 is_a: ZFA:0000207 ! fin musculature relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001162 ! anal fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001155 name: enteric nervous system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-65 is_a: ZFA:0001574 ! autonomic nervous system relationship: develops_from ZFA:0001334 ! presumptive enteric nervous system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001156 name: posterior lateral line placode namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-66 is_a: ZFA:0001310 ! dorsolateral placode relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0001471 ! posterior lateral line system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001157 name: posterior lateral line primordium namespace: zebrafish_anatomy def: "A migrating group of cells originating from the posterior lateral line placode. The primordium deposits seven to nine neuromasts and interneuromasts between them during its posterior migration to the tail. Gompel et al, 2001." [ZFIN:curator] synonym: "posterior lateral line primordia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-050228-67 is_a: ZFA:0000228 ! lateral line primordium relationship: develops_from ZFA:0001156 ! posterior lateral line placode relationship: end ZFS:0000036 ! Larval:Day 4 relationship: part_of ZFA:0001471 ! posterior lateral line system relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001158 name: endocrine system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-7 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001159 name: immune system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-8 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001160 name: adult namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050228-9 is_obsolete: true [Term] id: ZFA:0001161 name: pectoral fin namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050304-1 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0000141 ! pectoral fin bud relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001162 name: anal fin namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050420-1 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0001069 ! ventral fin fold relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001117 ! post-vent region relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001163 name: supraneural 7 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050420-10 is_a: ZFA:0001397 ! post-Weberian supraneural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001164 name: supraneural 6 namespace: zebrafish_anatomy synonym: "sn6" RELATED [] xref: ZFIN:ZDB-ANAT-050420-11 is_a: ZFA:0001397 ! post-Weberian supraneural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001165 name: supraneural 5 namespace: zebrafish_anatomy synonym: "sn5" RELATED [] xref: ZFIN:ZDB-ANAT-050420-12 is_a: ZFA:0001397 ! post-Weberian supraneural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001166 name: supraneural 9 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050420-13 is_a: ZFA:0001397 ! post-Weberian supraneural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001167 name: vertebra 1 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050420-14 is_a: ZFA:0001190 ! Weberian vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001168 name: vertebra 2 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050420-15 is_a: ZFA:0001190 ! Weberian vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001169 name: vertebra 3 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050420-16 is_a: ZFA:0001190 ! Weberian vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001170 name: vertebra 4 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050420-17 is_a: ZFA:0001190 ! Weberian vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001171 name: os suspensorium namespace: zebrafish_anatomy def: "Separate ossification from the parapophysis of the fourth vertebra; develops ventrally to curve around the anterior head of the swim bladder. Often termed a fifth Weberian ossicle. Bird and Mabee, 2003." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050420-18 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001170 ! vertebra 4 relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001172 name: roofing cartilage namespace: zebrafish_anatomy def: "Cartilaginous larval structure dorsal to the four anterior-most vertebrae, which forms the connection between neural arches and supraneurals in the Weberian apparatus. Bird and Mabee, 2003." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050420-19 is_a: ZFA:0001457 ! postcranial axial cartilage relationship: end ZFS:0000041 ! Larval:Days 21-29 relationship: part_of ZFA:0001191 ! supraneural 2 relationship: part_of ZFA:0001192 ! supraneural 3 relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001173 name: dorsal fin namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050420-2 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0000102 ! dorsal fin fold relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001174 name: pharyngeal epithelium namespace: zebrafish_anatomy def: "Epithelium lining the pharynx consisting largely of simple columnar epithelium with a short segment (1mm) of stratified squamous epithelium on the ventral side. Chen et al, 2007." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050420-20 is_a: ZFA:0001495 ! unilaminar epithelium relationship: develops_from ZFA:0001104 ! pharyngeal endoderm relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000056 ! pharynx relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001175 name: blastodisc namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050420-21 is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000015 ! Blastula:Dome relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0001176 name: blastoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050420-22 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001175 ! blastodisc relationship: end ZFS:0000022 ! Gastrula:Bud relationship: start ZFS:0000016 ! Blastula:30%-epiboly [Term] id: ZFA:0001177 name: roof plate spinal cord namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050420-23 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001178 name: non neural ectoderm namespace: zebrafish_anatomy synonym: "ventral ectoderm" RELATED [] xref: ZFIN:ZDB-ANAT-050420-24 relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: part_of ZFA:0000016 ! ectoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001179 name: epidermal superficial stratum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050420-25 relationship: develops_from ZFA:0001185 ! periderm relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000105 ! epidermis relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001180 name: epidermal basal stratum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050420-26 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000105 ! epidermis relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001181 name: epidermal intermediate stratum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050420-27 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000105 ! epidermis relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001182 name: dermal deep region namespace: zebrafish_anatomy def: "Portion of the dermis characterized by a well-arranged, plywood-like, collagenous network. Le Guellec et al, 2004." [ZFIN:curator] synonym: "stratum compactum" RELATED [] xref: ZFIN:ZDB-ANAT-050420-28 relationship: develops_from ZFA:0001186 ! collagenous dermal stroma relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001119 ! dermis relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001183 name: dermal superficial region namespace: zebrafish_anatomy synonym: "stratum laxum" RELATED [] xref: ZFIN:ZDB-ANAT-050420-29 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001119 ! dermis relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001184 name: pelvic fin namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050420-3 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0001384 ! pelvic fin bud relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001185 name: periderm namespace: zebrafish_anatomy def: "The outermost epidermal layer covering the fish at embryonic stages; derived from the EVL and thought to eventually be replaced by the superficial stratum of the epidermis. Sometimes used synonymously with EVL. Le Guellec et al, 2004." [ZFIN:curator] synonym: "EVL" RELATED [] xref: ZFIN:ZDB-ANAT-050420-30 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000086 ! EVL relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0000016 ! ectoderm relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001186 name: collagenous dermal stroma namespace: zebrafish_anatomy def: "A layer of collagen fibrils present in the imature integument in an acellular subepidermal space. At first, the fibrils are all oriented in the same direction, later they form the complex plywood-like structure that is characteristic of the dermal deep region. Le Guellec et al, 2004." [ZFIN:curator] synonym: "primary dermal stroma" RELATED [] xref: ZFIN:ZDB-ANAT-050420-31 relationship: end ZFS:0000041 ! Larval:Days 21-29 relationship: part_of ZFA:0001119 ! dermis relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001187 name: presumptive midbrain hindbrain boundary namespace: zebrafish_anatomy synonym: "MHB" RELATED [] xref: ZFIN:ZDB-ANAT-050420-32 relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001188 name: Weberian apparatus namespace: zebrafish_anatomy def: "The Weberian apparatus consists of the modified anteriormost four vertebrae and associated structures of otophysans which transduce sound or pressure waves from the tunica externa of the swimbladder to the inner ear (Alexander, 1962)." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050420-4 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001559 ! vertebral column relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001189 name: vertebra namespace: zebrafish_anatomy def: "All serially repeated ossified, cartilaginous, and ligamentous elements around the notochord (Schultze and Arratia, 1988)." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050420-5 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001559 ! vertebral column relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001190 name: Weberian vertebra namespace: zebrafish_anatomy def: "The first four vertebrae, which are part of the Weberian apparatus." [ZFIN:curator] synonym: "Weberian vertebrae" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-050420-6 is_a: ZFA:0000263 ! precaudal vertebra relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001188 ! Weberian apparatus relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001191 name: supraneural 2 namespace: zebrafish_anatomy def: "Supraneural 2 is an ovoid cartilage or cartilage replacement bone located above centrum 2. It forms an immovable joint with supraneural 3 and contributes to the neural complex roofing the neural canal." [ZFIN:curator] synonym: "small supraneural" RELATED [] synonym: "sn2" RELATED [] xref: ZFIN:ZDB-ANAT-050420-7 is_a: ZFA:0000442 ! supraneural relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001363 ! neural complex relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001192 name: supraneural 3 namespace: zebrafish_anatomy def: "Supraneural 3 is an elongated cartilage or cartilage replacement bone above vertebrae 3 and 4, developmentally fusing with NA 3 and 4. A crest or blade of membrane bone forms from its dorsal surface." [ZFIN:curator] synonym: "large supraneural" RELATED [] synonym: "sn3" RELATED [] xref: ZFIN:ZDB-ANAT-050420-8 is_a: ZFA:0000442 ! supraneural relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001363 ! neural complex relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001193 name: supraneural 8 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050420-9 is_a: ZFA:0001397 ! post-Weberian supraneural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001194 name: cranial neural crest namespace: zebrafish_anatomy def: "Neural crest that is part of the head." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-1 is_a: ZFA:0000045 ! neural crest relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0001195 name: pars anterior namespace: zebrafish_anatomy synonym: "pars distalis" RELATED [] xref: ZFIN:ZDB-ANAT-050711-10 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001282 ! adenohypophysis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001196 name: pars tuberalis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-11 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001282 ! adenohypophysis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001197 name: pars intermedia namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-12 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001282 ! adenohypophysis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001198 name: adenohypophyseal placode namespace: zebrafish_anatomy synonym: "pituitary placode" RELATED [] xref: ZFIN:ZDB-ANAT-050711-13 relationship: develops_from ZFA:0001178 ! non neural ectoderm relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001199 name: infundibulum namespace: zebrafish_anatomy def: "A short stalk connecting the pituitary with the brain. Axons of secretory cells in the floor of the diencephalon traverse the infundibulum and terminate in the neurohypophysis." [ZFIN:curator] synonym: "hypophysial stalk" RELATED [] synonym: "infundibulum of hypothalamus" RELATED [] synonym: "pituitary stalk" RELATED [] xref: ZFIN:ZDB-ANAT-050711-14 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001200 name: corpuscles of Stannius namespace: zebrafish_anatomy def: "Islands of eosinic cells found on the lateroventral surface of the kidney. Function is thought to be that of the parathyroid gland in other vertebrates, which are lacking in fishes. These cells secrete hypocalcin (teleocalcin) to regulate calcium metabolism." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-15 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000529 ! kidney relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001201 name: ventral lateral mesoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-16 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000083 ! ventral mesoderm relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0001202 name: optic cup namespace: zebrafish_anatomy synonym: "eye cup" RELATED [] xref: ZFIN:ZDB-ANAT-050711-17 relationship: develops_from ZFA:0000050 ! optic vesicle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000107 ! eye relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001203 name: ciliary body namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-18 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001202 ! optic cup relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001204 name: axial mesoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-19 relationship: develops_from ZFA:0001378 ! axial hypoblast relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000041 ! mesoderm relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001205 name: Meckel's cartilage namespace: zebrafish_anatomy def: "Meckel's cartilage is the bilaterally paired, rod-like, cartilaginous ventral component of the lower jar, or ventral mandibular arch. It is typically resorbed in adults." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-2 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001273 ! ventral mandibular arch relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001206 name: intermediate mesoderm namespace: zebrafish_anatomy synonym: "IM" RELATED [] xref: ZFIN:ZDB-ANAT-050711-20 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000041 ! mesoderm relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001207 name: presumptive rhombomere 1 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-21 relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001208 name: presumptive rhombomere 2 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-22 relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001209 name: presumptive rhombomere 7 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-23 relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001210 name: presumptive rhombomere 6 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-24 relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001211 name: presumptive rhombomere 5 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-25 relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001212 name: presumptive rhombomere 4 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-26 relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001213 name: presumptive rhombomere 3 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-27 relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001214 name: presumptive rhombomere 8 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-28 relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001215 name: thalamus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-29 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001216 name: splanchnocranium namespace: zebrafish_anatomy def: "Regional skeletal system of the jaws, hyoid and branchial arches." [ZFIN:curator] synonym: "pharyngeal arch skeleton" RELATED [] synonym: "pharyngeal skeleton" RELATED [] xref: ZFIN:ZDB-ANAT-050711-3 is_a: ZFA:0000737 ! cranium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001306 ! pharyngeal arch relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001217 name: presumptive hypochord namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-30 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001218 name: presumptive floor plate namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-31 relationship: end ZFS:0000023 ! Segmentation:1-4 somites relationship: part_of ZFA:0000132 ! neural plate relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001220 name: copula namespace: zebrafish_anatomy def: "Median cartilaginous elements that are the precursors of the basibranchials. They are not assigned to specific branchial arch numbers." [ZFIN:curator] synonym: "copulae" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-050711-33 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001221 name: copula 1 namespace: zebrafish_anatomy def: "A long slender cartilage extending along the midline from the posterior tip of the basihyal to between the third hypobranchials." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-34 is_a: ZFA:0001220 ! copula relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001222 name: copula 2 namespace: zebrafish_anatomy def: "A cartilage extending from the posterior tip of copula 1 to the anterior tips of the fifth ceratobranchials." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-35 is_a: ZFA:0001220 ! copula relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001223 name: basibranchial 1 namespace: zebrafish_anatomy def: "Basibranchial 1 ossifies posterior to the basihyal and anterior to the first hypobranchials in copula 1 (7.6 mm) ." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-36 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001224 name: basibranchial 2 namespace: zebrafish_anatomy def: "Basibranchial 2 ossifies in copula 1 posterior to the first hypobranchials and anterior to the second hypobranchials (6.8 mm). It is the first of the three basibranchials to ossify." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-37 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001225 name: basibranchial 3 namespace: zebrafish_anatomy def: "Basibranchial 3 ossifies in copula 1 posterior to the second hypobranchials and anterior to the third hypobranchials (7.6 mm). Cartilage pads, remnants of copula 1, remain between adjacent basibranchials in the adult." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-38 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001226 name: basibranchial 4 namespace: zebrafish_anatomy def: "Occasionally, a fourth basibranchial ossifies in the narrow copula 2 cartilage, which lies posterior to the third basibranchial and anterior to the anteromedial articulation of the fifth ceratobranchials." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-39 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001222 ! copula 2 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001227 name: mandibular arch namespace: zebrafish_anatomy def: "Skeletal and cartilagenous elements of the first pharyngeal arch." [ZFIN:curator] synonym: "jaw cartilage" RELATED [] synonym: "jaws" RELATED [] synonym: "oral jaw skeleton" RELATED [] synonym: "pharyngeal arch 1 skeleton" RELATED [] synonym: "visceral arch 1" RELATED [] xref: ZFIN:ZDB-ANAT-050711-4 is_a: ZFA:0001216 ! splanchnocranium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001612 ! pharyngeal arch 1 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001228 name: pharyngeal arch 3 skeleton namespace: zebrafish_anatomy synonym: "branchial arch 1" RELATED [] synonym: "gill arch 1" RELATED [] synonym: "visceral arch 3" RELATED [] xref: ZFIN:ZDB-ANAT-050711-40 is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001606 ! pharyngeal arch 3 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001229 name: pharyngeal arch 7 skeleton namespace: zebrafish_anatomy synonym: "branchial arch 5" RELATED [] synonym: "gill arch 5" RELATED [] synonym: "visceral arch 7" RELATED [] xref: ZFIN:ZDB-ANAT-050711-41 is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001610 ! pharyngeal arch 7 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001230 name: pharyngeal arch 6 skeleton namespace: zebrafish_anatomy synonym: "branchial arch 4" RELATED [] synonym: "gill arch 4" RELATED [] synonym: "visceral arch 6" RELATED [] xref: ZFIN:ZDB-ANAT-050711-42 is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001609 ! pharyngeal arch 6 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001231 name: pharyngeal arch 4 skeleton namespace: zebrafish_anatomy synonym: "branchial arch 2" RELATED [] synonym: "gill arch 2" RELATED [] synonym: "visceral arch 4" RELATED [] xref: ZFIN:ZDB-ANAT-050711-43 is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001607 ! pharyngeal arch 4 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001232 name: pharyngeal arch 5 skeleton namespace: zebrafish_anatomy synonym: "branchial arch 3" RELATED [] synonym: "gill arch 3" RELATED [] synonym: "visceral arch 5" RELATED [] xref: ZFIN:ZDB-ANAT-050711-44 is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001608 ! pharyngeal arch 5 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001233 name: hypobranchial 1 bone namespace: zebrafish_anatomy def: "Hypobranchial ossifications 1-3 develop in the small hypobranchial cartilages that lie between the medial tips of the ceratobranchials and copula 1. The first and second hypobranchials are small and irregular in shape; one or both ossifications are absent in some adults." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-45 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001524 ! hypobranchial 1 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001234 name: hypobranchial 4 bone namespace: zebrafish_anatomy def: "Tiny hypobranchial4 cartilages appear at anteromedial tips of ceratobranchial 4; these are not obviously present in mature specimens, due either to resorbtion or fusion to the cartilaginous anterior tip of ceratobranchial." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-46 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001523 ! hypobranchial 4 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001235 name: hypobranchial 3 bone namespace: zebrafish_anatomy def: "Hypobranchial ossifications 1-3 develop in the small hypobranchial cartilages that lie between the medial tips of the ceratobranchials and copula 1. The first and second hypobranchials are small and irregular in shape; one or both ossifications are absent in some adults." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-47 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001526 ! hypobranchial 3 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001236 name: hypobranchial 2 bone namespace: zebrafish_anatomy def: "Hypobranchial ossifications 1-3 develop in the small hypobranchial cartilages that lie between the medial tips of the ceratobranchials and copula 1. The first and second hypobranchials are small and irregular in shape; one or both ossifications are absent in some adults." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-48 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001525 ! hypobranchial 2 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001237 name: ceratobranchial 1 bone namespace: zebrafish_anatomy def: "Anteromedially ceratobranchials 1-3 articulate with hypobranchials 1-3; medially they articulate with the cartilage between the basibranchials. Posterolaterally ceratobranchials 1-4 articulate with epibranchials 1-4. Gill rakers are present on the anterior and posterior margins of ceratobranchials 1-4." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-49 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001520 ! ceratobranchial 1 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001238 name: iris namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-5 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001202 ! optic cup relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001239 name: ceratobranchial 5 bone namespace: zebrafish_anatomy def: "Ceratobranchial 5 ossifies before ceratobranchials 1-4. In the adult, ceratobranchial 5 is heavily ossified and crescent-shaped with two to three rows of posteromedially directed teeth. The anteroventral tips of ceratobranchials 5 meet medially and are ligamentously joined." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-50 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001521 ! ceratobranchial 5 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001240 name: ceratobranchial 4 bone namespace: zebrafish_anatomy def: "Ceratobranchial 4 articulates with copula 2 medially. Posterolaterally ceratobranchials 1-4 articulate with epibranchials 1-4. Gill rakers are present on the anterior and posterior margins of ceratobranchials 1-4" [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-51 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001519 ! ceratobranchial 4 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001241 name: ceratobranchial 3 bone namespace: zebrafish_anatomy def: "Anteromedially ceratobranchials 1-3 articulate with hypobranchials 1-3; medially they articulate with the cartilage between the basibranchials. Posterolaterally ceratobranchials 1-4 articulate with epibranchials 1-4. Gill rakers are present on the anterior and posterior margins of ceratobranchials 1-4" [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-52 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001518 ! ceratobranchial 3 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001242 name: ceratobranchial 2 bone namespace: zebrafish_anatomy def: "Anteromedially ceratobranchials 1-3 articulate with hypobranchials 1-3; medially they articulate with the cartilage between the basibranchials. Posterolaterally ceratobranchials 1-4 articulate with epibranchials 1-4. Gill rakers are present on the anterior and posterior margins of ceratobranchials 1-4" [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-53 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001517 ! ceratobranchial 2 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001243 name: epibranchial 1 bone namespace: zebrafish_anatomy def: "The narrowed medial end of epibranchial 1 articulates through cartilage with pharyngobranchial 1." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-54 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001528 ! epibranchial 1 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001244 name: epibranchial 5 namespace: zebrafish_anatomy def: "Epibranchial 5 appears as a separate center of chondrification (6.2 mm) posterior to the lateral tip of epibranchial 4 and immediately anterior to the upper end of ceratobranchial 5. In the adult, epibranchial 5 persists as a small, cartilaginous rod extending from the cartilaginous junction of the posterodorsal tip of the uncinate process of epibranchial 4 and tip of ceratobranchial5, to the cartilaginous junction of ceratobranchial 4 and epibranchial4." [ZFIN:curator] synonym: "interbranchial IV" RELATED [] xref: ZFIN:ZDB-ANAT-050711-55 is_a: ZFA:0001527 ! epibranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001245 name: epibranchial 4 bone namespace: zebrafish_anatomy def: "The narrow end of epibranchial4 is slightly flared, and it articulates with cartilaginous pharyngobranchial4." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-56 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001531 ! epibranchial 4 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001246 name: epibranchial 2 bone namespace: zebrafish_anatomy def: "The flared medial end of epibranchial 2 articulates with bifurcate lateral projections from pharyngobranchial 1." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-57 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001530 ! epibranchial 2 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001247 name: epibranchial 3 bone namespace: zebrafish_anatomy def: "The flared medial end of epibranchial3 articulates with the posterolateral edge of pharyngobranchial2 + 3." [ZFIN:curator] synonym: "infrapharyngobranchial 3" RELATED [] xref: ZFIN:ZDB-ANAT-050711-58 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001529 ! epibranchial 3 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001248 name: pharyngobranchial 1 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-59 is_obsolete: true [Term] id: ZFA:0001249 name: exocrine pancreas namespace: zebrafish_anatomy def: "The exocrine pancreas is composed of acinar epithelial cells and ductal epithelium that manufacture the proteolytic enzymes and bicarbonate required for digestion." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-6 relationship: develops_from ZFA:0001369 ! anterior pancreatic bud relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000140 ! pancreas relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001250 name: pharyngobranchial 2 bone namespace: zebrafish_anatomy def: "Pharyngobranchial 2 (misidentified as pharyngobranchial 1 in Cubbage and Mabee, 1993 and Mayden 1989) is present and separate from pharyngobranchial 3. It (8.0 mm) ossifies after pharyngobranchial 3. In the adult, the cartilaginous anterior end of the ossified pharyngobranchial 2 articulates with the cartilaginous medial tip of epibranchial 1. It articulates anterolaterally and posterolaterally with the anterior and posterior cartilaginous tips of epibranchial2. In Cyprinidae pb3 overlaps pb2 (Siebert, 1987; Cavender & Coburn, 1992) but does not fuse to it." [ZFIN:curator] synonym: "infrapharyngobranchial 2" RELATED [] xref: ZFIN:ZDB-ANAT-050711-60 is_a: ZFA:0000527 ! pharyngobranchial bone relationship: develops_from ZFA:0001536 ! pharyngobranchial 2 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001251 name: pharyngobranchial 4 cartilage namespace: zebrafish_anatomy def: "Pharyngobranchial cartilage which forms in close proximity to or fused with pharyngobranchial 3; may not be distinguishable as a separate element in the adult. Remains cartilaginous." [ZFIN:curator] synonym: "infrapharyngobranchials" RELATED [] xref: ZFIN:ZDB-ANAT-050711-61 is_a: ZFA:0001533 ! pharyngobranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001252 name: pharyngobranchial 3 bone namespace: zebrafish_anatomy def: "Pharyngobranchial bone of the fifth pharyngeal arch that lies approximately posteromedial to epibranchial 2 and medial to epibranchial 3." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-62 is_a: ZFA:0000527 ! pharyngobranchial bone relationship: develops_from ZFA:0001534 ! pharyngobranchial 3 cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001253 name: pharyngobranchial 2+3 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-63 is_obsolete: true [Term] id: ZFA:0001254 name: cranial motoneurons namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-64 is_obsolete: true [Term] id: ZFA:0001256 name: lateral floor plate namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-66 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001257 name: medial floor plate namespace: zebrafish_anatomy def: "The medial portion of the spinal cord floor plate, located adjacent to the notochord." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-67 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001258 name: floor plate hindbrain namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-68 is_a: ZFA:0000022 ! floor plate relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000029 ! hindbrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001259 name: forebrain ventricle namespace: zebrafish_anatomy synonym: "forebrain vesicle" RELATED [] synonym: "prosencephalic ventricle" RELATED [] xref: ZFIN:ZDB-ANAT-050711-69 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000109 ! forebrain relationship: part_of ZFA:0001261 ! ventricular system relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001260 name: endocrine pancreas namespace: zebrafish_anatomy def: "The zebrafish endocrine pancreas is composed of small groups of islet cells that are distributed throughout the exocrine pancreas. The islet cells produce insulin, glucagon and somatostatin." [ZFIN:curator] synonym: "pancreatic islet" RELATED [] xref: ZFIN:ZDB-ANAT-050711-7 relationship: develops_from ZFA:0001370 ! posterior pancreatic bud relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000140 ! pancreas relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001261 name: ventricular system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-70 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001262 name: gonad primordium namespace: zebrafish_anatomy def: "Immature reproductive tissue that has not undergone final maturation into either testis or ovary. During gonadal development, the gonad may be transiently intersexual where there is a parallel presence of both oocytes and spermatocytes. Selman et al, 1993." [ZFIN:curator] synonym: "previtillogenic ovarian follicle" RELATED [] xref: ZFIN:ZDB-ANAT-050711-72 is_a: ZFA:0001110 ! ovarian follicle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001264 name: ovarian follicle stage IV namespace: zebrafish_anatomy def: "Stage IV (690-730 microns) are oocyte maturation. Selman et al, 1993." [ZFIN:curator] synonym: "mature ovarian follicle" RELATED [] xref: ZFIN:ZDB-ANAT-050711-73 is_a: ZFA:0001110 ! ovarian follicle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001265 name: ovarian follicle stage II namespace: zebrafish_anatomy def: "Stage II follicles (140-340 microns) are cortical alveolus stage. Selman et al, 1993." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-74 is_a: ZFA:0001110 ! ovarian follicle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001266 name: ovarian follicle stage III namespace: zebrafish_anatomy def: "Stage III (340-690 microns) are vitellogenesis. Selman et al, 1993." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-75 is_a: ZFA:0001110 ! ovarian follicle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001267 name: cranial vasculature namespace: zebrafish_anatomy synonym: "head vasculature" RELATED [] xref: ZFIN:ZDB-ANAT-050711-76 is_a: ZFA:0001079 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001268 name: sperm duct namespace: zebrafish_anatomy synonym: "sperm ducts" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-050711-77 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000598 ! testis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001269 name: regenerating fin namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-78 is_a: ZFA:0000108 ! fin relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001270 name: blastema namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-79 is_a: ZFA:0005147 ! regenerating tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001269 ! regenerating fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001271 name: neurohypophysis namespace: zebrafish_anatomy synonym: "posterior pituitary" RELATED [] xref: ZFIN:ZDB-ANAT-050711-8 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000118 ! hypophysis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001272 name: palatoquadrate arch namespace: zebrafish_anatomy def: "The dorsal portion of the first pharyngeal arch, comprising the upper jaw." [ZFIN:curator] synonym: "dorsal mandibular arch" RELATED [] synonym: "dorsal visceral arch 2" RELATED [] synonym: "upper jaw" RELATED [] synonym: "upper pharyngeal jaws" RELATED [] xref: ZFIN:ZDB-ANAT-050711-80 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000444 ! suspensorium relationship: part_of ZFA:0000590 ! oral region relationship: part_of ZFA:0001227 ! mandibular arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001273 name: ventral mandibular arch namespace: zebrafish_anatomy def: "The ventral portion of the first pharyngeal arch, comprising the lower jaw." [ZFIN:curator] synonym: "lower jaw" RELATED [] synonym: "mandible" RELATED [] synonym: "mandibular series" RELATED [] xref: ZFIN:ZDB-ANAT-050711-81 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000590 ! oral region relationship: part_of ZFA:0001227 ! mandibular arch relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001274 name: coronomeckelian namespace: zebrafish_anatomy def: "The coronomeckelian is a membrane bone that ossifies on Meckel's cartilage where the tendon from the adductor mandibulae A3 inserts (6.1mm). In the adult, the coronomeckelian is a small, irregularly shaped bone that is fused to the dorsomedial surface of the anguloarticular, just dorsal to Meckel's cartilage." [ZFIN:curator] synonym: "sesamoid articular" RELATED [] xref: ZFIN:ZDB-ANAT-050711-82 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: part_of ZFA:0001273 ! ventral mandibular arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001275 name: mentomeckelian namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050711-83 is_obsolete: true [Term] id: ZFA:0001276 name: pharyngeal arch 2 skeleton namespace: zebrafish_anatomy synonym: "hyoid arch" RELATED [] synonym: "hyoid bars" RELATED [] synonym: "ventral visceral arch 2" RELATED [] synonym: "visceral arch 2" RELATED [] xref: ZFIN:ZDB-ANAT-050711-84 is_a: ZFA:0001216 ! splanchnocranium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001611 ! pharyngeal arch 2 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001277 name: anterior chamber swim bladder namespace: zebrafish_anatomy def: "The anterior compartment of the swim bladder is thought to have acoustic resonance properties that play a key role in audition. It is connected to the posterior chamber via the dusctus communicans. Finney et al, 2006." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060816-3 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000076 ! swim bladder relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001278 name: posterior chamber swim bladder namespace: zebrafish_anatomy def: "The posterior compartment of the swim bladder plays a key role in buoyancy control. It is connected to the anterior chamber via the ductus communicans. Finney et al, 2006." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060816-4 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000076 ! swim bladder relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001279 name: branchiostegal ray 1 namespace: zebrafish_anatomy def: "Branchiostegal ray 1 is the most anterior ray which ossifies last (5.5 mm NL)." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-87 is_a: ZFA:0000476 ! branchiostegal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001280 name: branchiostegal ray 3 namespace: zebrafish_anatomy def: "Branchiostegal ray 3 is the most posterior ray which ossifies first (3.4 mm NL)." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-88 is_a: ZFA:0000476 ! branchiostegal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001281 name: branchiostegal ray 2 namespace: zebrafish_anatomy def: "Branchiostegal ray 2 is between rays 1 and 3 and ossifies second." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050711-89 is_a: ZFA:0000476 ! branchiostegal ray relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001282 name: adenohypophysis namespace: zebrafish_anatomy def: "The anterior lobe of the hypophysis (pituitary gland). This lobe contains cells that produce prolactin, growth hormone, thyroid-stimulating hormone, follicle-stimulating hormone and proopiomelanocortin. In contrast to mamalian vertebrates, the adenohypophysis remains in a subepithelial position and there exists no equivalent of Rathke's pouch in zebrafish. Herzog et al, 2004." [ZFIN:curator] synonym: "anterior pituitary" RELATED [] xref: ZFIN:ZDB-ANAT-050711-9 relationship: develops_from ZFA:0001198 ! adenohypophyseal placode relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000118 ! hypophysis relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001283 name: pupil namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050915-88 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000107 ! eye relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001284 name: optic fissure namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050915-89 relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001202 ! optic cup relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001285 name: intersegmental vessel namespace: zebrafish_anatomy synonym: "intersegmental vessels" RELATED PLURAL [] synonym: "intersomitic vessels" RELATED [] synonym: "Se" RELATED [] synonym: "semental vessel" RELATED [] xref: ZFIN:ZDB-ANAT-050915-90 relationship: develops_from ZFA:0000014 ! dorsal aorta relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! tail vasculature relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001286 name: caudal vein plexus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050915-91 is_a: ZFA:0005037 ! tail vasculature relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001287 name: renal tubule namespace: zebrafish_anatomy synonym: "renal tubules" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-050915-92 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000529 ! kidney relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001288 name: renal glomerulus namespace: zebrafish_anatomy synonym: "renal glomeruli" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-050915-93 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000529 ! kidney relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001289 name: ciliary marginal zone namespace: zebrafish_anatomy def: "Region at the periphery of the retina where retinal stem cells are located. After 60 hpf, the CMZ is the source of most retinal growth. Wehman et al, 2005." [ZFIN:curator] synonym: "circumferential germinal zone" RELATED [] synonym: "CMZ" RELATED [] xref: ZFIN:ZDB-ANAT-050915-94 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000152 ! retina relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001290 name: stomodeum namespace: zebrafish_anatomy def: "Anterior part of the embryonic alimentary canal formed as an invagination of the ectoderm; the future mouth." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050915-95 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0001291 name: facial ganglion namespace: zebrafish_anatomy synonym: "geniculate ganglion" RELATED [] synonym: "gVII" RELATED [] xref: ZFIN:ZDB-ANAT-050915-96 is_a: ZFA:0001555 ! epibranchial ganglion relationship: develops_from ZFA:0001295 ! facial placode relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001292 name: epiphyseal stalk namespace: zebrafish_anatomy def: "The stalk emanates from the diencephalic roof at a left-of-medial position." [ZFIN:curator] synonym: "pineal stalk" RELATED [] xref: ZFIN:ZDB-ANAT-050915-97 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001359 ! pineal complex relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0001293 name: posterior kidney namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050915-98 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0000151 ! pronephros relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000529 ! kidney relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001294 name: epibranchial placode namespace: zebrafish_anatomy synonym: "epibranchial placodes" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-050915-99 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007061 ! epibranchial field relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000142 ! peripheral nervous system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001295 name: facial placode namespace: zebrafish_anatomy synonym: "geniculate placode" RELATED [] xref: ZFIN:ZDB-ANAT-050915-100 is_a: ZFA:0001294 ! epibranchial placode relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001296 name: glossopharyngeal placode namespace: zebrafish_anatomy synonym: "petrosal placode" RELATED [] xref: ZFIN:ZDB-ANAT-050915-101 is_a: ZFA:0001294 ! epibranchial placode relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001297 name: vagal placode 1 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050915-102 is_a: ZFA:0001294 ! epibranchial placode relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001298 name: vagal placode 2 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050915-103 is_a: ZFA:0001294 ! epibranchial placode relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001299 name: vagal placode 3 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050915-104 is_a: ZFA:0001294 ! epibranchial placode relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001300 name: vagal placode 4 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050915-105 is_a: ZFA:0001294 ! epibranchial placode relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001301 name: glossopharyngeal ganglion namespace: zebrafish_anatomy synonym: "gIX" RELATED [] synonym: "petrosal ganglion" RELATED [] xref: ZFIN:ZDB-ANAT-050915-106 is_a: ZFA:0001555 ! epibranchial ganglion relationship: develops_from ZFA:0001296 ! glossopharyngeal placode relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001302 name: vagal ganglion 1 namespace: zebrafish_anatomy synonym: "gX1" RELATED [] synonym: "nodose ganglion 1" RELATED [] xref: ZFIN:ZDB-ANAT-050915-107 is_a: ZFA:0001555 ! epibranchial ganglion relationship: develops_from ZFA:0001297 ! vagal placode 1 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001303 name: vagal ganglion 2 namespace: zebrafish_anatomy synonym: "gX2" RELATED [] synonym: "nodose ganglion 2" RELATED [] xref: ZFIN:ZDB-ANAT-050915-108 is_a: ZFA:0001555 ! epibranchial ganglion relationship: develops_from ZFA:0001298 ! vagal placode 2 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001304 name: vagal ganglion 3 namespace: zebrafish_anatomy synonym: "gX3" RELATED [] synonym: "nodose ganglion 3" RELATED [] xref: ZFIN:ZDB-ANAT-050915-109 is_a: ZFA:0001555 ! epibranchial ganglion relationship: develops_from ZFA:0001299 ! vagal placode 3 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001305 name: vagal ganglion 4 namespace: zebrafish_anatomy synonym: "gX4" RELATED [] synonym: "nodose ganglion 4" RELATED [] xref: ZFIN:ZDB-ANAT-050915-110 is_a: ZFA:0001555 ! epibranchial ganglion relationship: develops_from ZFA:0001300 ! vagal placode 4 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001306 name: pharyngeal arch namespace: zebrafish_anatomy synonym: "pharyngeal arches" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-050915-111 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001114 ! head relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001307 name: pharyngeal musculature namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050915-112 is_a: ZFA:0000328 ! cephalic musculature relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001306 ! pharyngeal arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001308 name: organism subdivision namespace: zebrafish_anatomy def: "Anatomical structure which is a primary subdivision of whole organism. The mereological sum of these is the whole organism." [ZFIN:curator] synonym: "body part" RELATED [] xref: CARO:0000032 xref: ZFIN:ZDB-ANAT-050915-113 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001094 ! whole organism relationship: start ZFS:0000017 ! Gastrula:50%-epiboly [Term] id: ZFA:0001309 name: neurogenic placode namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050915-114 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0007059 ! neurogenic field relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000016 ! ectoderm relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001310 name: dorsolateral placode namespace: zebrafish_anatomy synonym: "dorsolateral placodes" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-050915-115 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007060 ! dorsolateral field relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001311 name: roof plate rhombomere namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-051116-1 is_a: ZFA:0007058 ! roof plate relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0001064 ! rhombomere relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001312 name: dorsal anterior lateral line ganglion namespace: zebrafish_anatomy synonym: "anterodorsal lateral line ganglion" RELATED [] xref: ZFIN:ZDB-ANAT-050915-116 is_a: ZFA:0001391 ! anterior lateral line ganglion relationship: develops_from ZFA:0001316 ! anterior lateral line placode relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001313 name: ventral anterior lateral line ganglion namespace: zebrafish_anatomy synonym: "anteroventral lateral line ganglion" RELATED [] xref: ZFIN:ZDB-ANAT-050915-117 is_a: ZFA:0001391 ! anterior lateral line ganglion relationship: develops_from ZFA:0001316 ! anterior lateral line placode relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001314 name: posterior lateral line ganglion namespace: zebrafish_anatomy def: "The posterior lateral line ganglion develops from a cranial ectodermal placode and contains sensory neurons that innervate the posterior lateral line system." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050915-118 is_a: ZFA:0000120 ! lateral line ganglion relationship: develops_from ZFA:0001156 ! posterior lateral line placode relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001315 name: atrioventricular canal namespace: zebrafish_anatomy synonym: "AV canal" RELATED [] xref: ZFIN:ZDB-ANAT-051116-2 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0001316 name: anterior lateral line placode namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050915-119 is_a: ZFA:0001310 ! dorsolateral placode relationship: end ZFS:0000031 ! Pharyngula:Prim-25 relationship: part_of ZFA:0001468 ! anterior lateral line system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001317 name: endocardial cushion namespace: zebrafish_anatomy def: "Swellings of tissue present between the endocardial and myocardial cell layers that will give rise to the interstitial cells of the cardiac valves." [ZFIN:curator] synonym: "endocardial cushions" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-051116-3 relationship: develops_from ZFA:0005072 ! endocardial ring relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0001318 name: cardiac jelly namespace: zebrafish_anatomy def: "The extracellular matrix between the myocardium and the endocardium. The cardiac jelly plays a central role in the septation of the heart and comprises most of the thickness of the heart wall at early stages, but disappears as the heart differentiates." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-051116-4 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000149 ! primitive heart tube relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0001319 name: myocardium namespace: zebrafish_anatomy synonym: "cardiac muscle" RELATED [] xref: ZFIN:ZDB-ANAT-051116-5 is_a: ZFA:0005145 ! muscle relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001320 name: endocardium namespace: zebrafish_anatomy def: "Layer that lines the lumen of the heart." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-051116-6 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: part_of ZFA:0000360 ! heart tube relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001321 name: neurocranial trabecula namespace: zebrafish_anatomy synonym: "neurocranial trabeculae" RELATED PLURAL [] synonym: "trabecula" RELATED [] xref: ZFIN:ZDB-ANAT-051116-7 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000351 ! olfactory region relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001322 name: dorsoventral diencephalic tract namespace: zebrafish_anatomy def: "A tract originating in the epiphysis and fasiculating with the tract of the postoptic commissure. Ross et al, 1992." [ZFIN:curator] synonym: "DVDT" RELATED [] xref: ZFIN:ZDB-ANAT-060131-6 is_a: ZFA:0000338 ! diencephalic tracts and commissures relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001323 name: mid intestine namespace: zebrafish_anatomy def: "The terminal region of the mid intestine is comprised of specialized enterocytes that appear to play a role in mucosal immunity. Wallace et al, 2005." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060131-7 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001338 ! intestine relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001324 name: enteric musculature namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-8 is_a: ZFA:0000548 ! musculature system relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001325 name: neural prezygapophysis namespace: zebrafish_anatomy def: "Paired, anteromedially directed processes from the neural arches, ligamentously joined to the postzygapophyses of the preceding vertebra." [ZFIN:curator] synonym: "neural prezygapophyses" RELATED PLURAL [] synonym: "neural prezygopophyses" RELATED [] xref: ZFIN:ZDB-ANAT-060331-7 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001066 ! neural arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001326 name: lens epithelium namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-9 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000035 ! lens relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001327 name: abdominal musculature namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-10 is_a: ZFA:0000473 ! trunk musculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001328 name: neuromere namespace: zebrafish_anatomy def: "A metameric segment of the central nervous system." [ZFIN:curator] synonym: "neural segment" RELATED [] synonym: "neuromeres" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-060131-11 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001329 name: retinal inner plexiform layer namespace: zebrafish_anatomy def: "The layer within the retina where the bipolar cells synapse with the dendrites of the ganglion cells." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-051116-8 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001330 name: retinal outer plexiform layer namespace: zebrafish_anatomy def: "The layer within the retina where the bipolar cells synapse with the photoreceptor cells." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-051116-9 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001331 name: outer limiting membrane namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-051116-10 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001332 name: spinal neuromere namespace: zebrafish_anatomy synonym: "spinal cord segment" RELATED [] synonym: "spinal neuromeres" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-060131-12 is_a: ZFA:0001328 ! neuromere relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000075 ! spinal cord relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001333 name: visceral organ namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-13 is_obsolete: true [Term] id: ZFA:0001334 name: presumptive enteric nervous system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-14 is_a: ZFA:0001116 ! presumptive structure relationship: develops_from ZFA:0000818 ! vagal neural crest relationship: end ZFS:0000032 ! Pharyngula:High-pec relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001335 name: supradorsal namespace: zebrafish_anatomy def: "Supradorsals are small paired nodules of cartilage positioned at the distal ends of neural arches and the proximal end of neural spines (Arratia et al., 2001)." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-8 is_a: ZFA:0001457 ! postcranial axial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001066 ! neural arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001336 name: neural spine namespace: zebrafish_anatomy def: "Neural spines are extensions of neural arches dorsal to the neural canal in the median skeletogenous septum. Neural spines are typically unpaired median structures but can be paired in some instances, e.g., in the abdominal region of basal teleosts such as Leptolepis, Elops, Megalops, and Hiodon)." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-9 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001066 ! neural arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001337 name: spermatogonia namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-15 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000598 ! testis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001338 name: intestine namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-16 is_a: ZFA:0001490 ! cavitated compound organ relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001339 name: nucleus of the tract of the anterior commissure namespace: zebrafish_anatomy def: "Telencephalic nucleus containing the cell bodies of neurons whose axons form the anterior commissure." [ZFIN:curator] synonym: "ntAC" RELATED [] xref: ZFIN:ZDB-ANAT-060131-17 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001108 ! anterior commissure relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001340 name: nucleus of the tract of the postoptic commissure namespace: zebrafish_anatomy def: "The nucleus containing the cell bodies of neurons whose axons form the postoptic commissure." [ZFIN:curator] synonym: "ntPOC" RELATED [] xref: ZFIN:ZDB-ANAT-060131-18 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001341 name: intervening zone namespace: zebrafish_anatomy def: "A zone of delayed differentiation at the midbrainhindbrain boundary. The IZ separates midbrain from anterior hindbrain neuronal clusters and has been described in all vertebrates. Geling et al, 2003." [ZFIN:curator] synonym: "IZ" RELATED [] xref: ZFIN:ZDB-ANAT-060131-19 relationship: develops_from ZFA:0001342 ! presumptive intervening zone relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000042 ! midbrain hindbrain boundary relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001342 name: presumptive intervening zone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-20 relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0001343 name: telencephalon diencephalon boundary namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-21 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000109 ! forebrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001344 name: zona limitans intrathalamica namespace: zebrafish_anatomy def: "The border between the dorsal and ventral thalamus." [ZFIN:curator] synonym: "zli" RELATED [] xref: ZFIN:ZDB-ANAT-060131-22 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001215 ! thalamus relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001345 name: interrenal gland namespace: zebrafish_anatomy def: "An epithelial structure consisting of steroid producing cells interposed with chromaffin cells embedded within the head kidney. The interrenal gland is thought to be the equivalent of the mammalian adrenal cortex in zebrafish. Hsu et al. 2003." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060131-23 relationship: develops_from ZFA:0001346 ! interrenal primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000669 ! head kidney relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001346 name: interrenal primordium namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-24 relationship: develops_from ZFA:0001206 ! intermediate mesoderm relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0000529 ! kidney relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001347 name: stratum fibrosum et griseum superficiale namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-25 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001348 name: stratum marginale namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-26 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001349 name: stratum opticum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-27 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001350 name: stratum griseum centrale namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-28 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001351 name: stratum album centrale namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-29 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001352 name: stratum periventriculare namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-30 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000445 ! optic tectum relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001353 name: mesencephalic tectum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-31 relationship: develops_from ZFA:0001357 ! alar plate midbrain relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001354 name: mesencephalic tegmentum namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-32 relationship: develops_from ZFA:0000761 ! basal plate midbrain relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001355 name: primitive meninx namespace: zebrafish_anatomy synonym: "meninges" RELATED [] synonym: "meninx primitiva" RELATED [] xref: ZFIN:ZDB-ANAT-060131-33 relationship: develops_from ZFA:0000045 ! neural crest relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000396 ! nervous system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001356 name: terminal nerve namespace: zebrafish_anatomy def: "The terminal nerve, located anterior to cranial nerve I, is comprised of a group of cells with somata adjacent to the olfactory bulb and processes that extend anteriorly to the olfactory epithelium and posteriorly to the telencephalon. In teleost fish an additional group of axons extends along the optic tract and delivers putative neuromodulators to the retina. It is thought to develop from cranial neural crest. Whitlock 2004. Also see Grens, Greenwood and Fernald, Brain Behav Evol 2005; 66(1):1-9." [ZFIN:curator] synonym: "nervus terminalis" RELATED [] xref: ZFIN:ZDB-ANAT-060131-34 is_a: ZFA:0000641 ! cranial nerve relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001357 name: alar plate midbrain namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-35 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000128 ! midbrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001358 name: roof plate diencephalon namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-36 is_a: ZFA:0007058 ! roof plate relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001359 name: pineal complex namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-37 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000509 ! epithalamus relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001360 name: parapineal organ namespace: zebrafish_anatomy def: "An unpaired left-sided accessory organ which plays a role in establishing lateral brain left right asymmetry. Gamse et al, 2003." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060131-38 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001359 ! pineal complex relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001361 name: basiventral namespace: zebrafish_anatomy def: "Basiventrals are bilaterally paired cartilages lateral to the notochord which are replaced by ossified parapophyses or hemal arches." [ZFIN:curator] synonym: "arcualia" RELATED [] xref: ZFIN:ZDB-ANAT-060331-10 is_a: ZFA:0001457 ! postcranial axial cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001362 name: parapophysis namespace: zebrafish_anatomy def: "Parapophyses are lateral or ventrolateral projections of vertebrae to which ribs are attached in Danio rerio. Parapophyses can arise through replacement ossification of a basiventral or form directly in bone. They are separated from the centrum in basal teleosts, e.g., Leptolepis coryphaenoides, Megalops and Elops." [ZFIN:curator] synonym: "lateral process of basiventral" RELATED [] synonym: "transverse process" RELATED [] xref: ZFIN:ZDB-ANAT-060331-11 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001361 ! basiventral relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001582 ! non-Weberian precaudal vertebra relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001363 name: neural complex namespace: zebrafish_anatomy alt_id: ZFA:0001398 def: "The neural complex is the collective term for the ossified supraneurals (Sn 2 and Sn 3) and their membrane bone extensions above the first four vertebrae. (Hoffmann and Britz, 2006), Bird and Mabee, 2003." [ZFIN:curator] synonym: "Weberian supraneural" RELATED [] xref: ZFIN:ZDB-ANAT-060331-12 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001188 ! Weberian apparatus relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001364 name: hemal spine namespace: zebrafish_anatomy def: "Hemal spines are extensions of hemal arches in the ventral skeletogenous septum of the caudal region." [ZFIN:curator] synonym: "haemal spine" RELATED [] xref: ZFIN:ZDB-ANAT-060331-13 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000519 ! hemal arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001365 name: trigeminal motor nuclei namespace: zebrafish_anatomy synonym: "motor nucleus V" RELATED [] synonym: "nV" RELATED [] xref: ZFIN:ZDB-ANAT-060131-39 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001366 name: tract of the postoptic commissure namespace: zebrafish_anatomy synonym: "TPOC" RELATED [] xref: ZFIN:ZDB-ANAT-060131-40 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000059 ! postoptic commissure relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001367 name: forebrain midbrain boundary namespace: zebrafish_anatomy def: "The boundary between the diencephalon and the mesencephalon." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060131-41 relationship: develops_from ZFA:0007040 ! forebrain midbrain boundary neural tube relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001368 name: presumptive forebrain midbrain boundary namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-42 relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001369 name: anterior pancreatic bud namespace: zebrafish_anatomy synonym: "ventral pancreatic anlage" RELATED [] xref: ZFIN:ZDB-ANAT-060131-43 is_a: ZFA:0001390 ! pancreatic bud relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0001370 name: posterior pancreatic bud namespace: zebrafish_anatomy synonym: "dorsal pancreatic anlage" RELATED [] xref: ZFIN:ZDB-ANAT-060131-44 is_a: ZFA:0001390 ! pancreatic bud relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001371 name: pancreatic system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-45 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0001158 ! endocrine system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001372 name: pancreatic duct namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-46 relationship: develops_from ZFA:0001369 ! anterior pancreatic bud relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001371 ! pancreatic system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001373 name: migratory slow muscle precursor cell namespace: zebrafish_anatomy def: "Cells that initially are located adjacent to the spinal cord and notochord along that migrate from their initial medial position radially through the myotome to the lateral surface of the somites." [ZFIN:curator] synonym: "migratory slow muscle precursor cells" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-060131-47 relationship: develops_from ZFA:0000003 ! adaxial cell relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000155 ! somite relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0001374 name: atrial myocardium namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-48 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000471 ! atrium relationship: part_of ZFA:0001319 ! myocardium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001375 name: ventriculo bulbo valve namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-49 is_a: ZFA:0005065 ! heart valve relationship: develops_from ZFA:0001317 ! endocardial cushion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0000173 ! bulbus arteriosus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001376 name: presumptive ectoderm namespace: zebrafish_anatomy alt_id: ZFA:0000147 synonym: "presumptive epidermis" RELATED [] xref: ZFIN:ZDB-ANAT-060131-50 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000019 ! Gastrula:Shield relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0001377 name: presumptive mesoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-51 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000021 ! Gastrula:90%-epiboly relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0001378 name: axial hypoblast namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-52 relationship: develops_from ZFA:0000071 ! shield relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0000117 ! hypoblast relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0001379 name: pharyngeal ectoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-53 relationship: end ZFS:0000027 ! Segmentation:20-25 somites relationship: part_of ZFA:0000056 ! pharynx relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001381 name: hypohyal namespace: zebrafish_anatomy def: "Hypohyals are the most anterior of the bilaterally paired ventral hyoid arch elements. The two hypohyals in zebrafish ossify at the anterodorsal and anteroventral tips of the ceratohyal cartilages; no separate hypohyal cartilages are present." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-15 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001400 ! ceratohyal cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001382 name: epibranchial uncinate process namespace: zebrafish_anatomy def: "Epibranchials 1-3 in adults are compound elements formed by the fusion of epibranchial cartilages and the so-called uncinate processes. Posteromedially directed uncinate processes develop on the posterior edge of epibranchials 1-3. These appear as separate centers of chondrification (6.2 mm) that later fuse laterally to the posterior edges of the epibranchial cartilages (6.8 mm)." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-16 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000658 ! epibranchial bone relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001383 name: fin bud namespace: zebrafish_anatomy synonym: "fin buds" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-060131-54 is_a: ZFA:0000292 ! surface structure is_a: ZFA:0001105 ! embryonic structure relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001384 name: pelvic fin bud namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-55 is_a: ZFA:0001383 ! fin bud relationship: develops_from ZFA:0001454 ! pelvic fin field relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001385 name: apical ectodermal ridge pelvic fin bud namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-56 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001384 ! pelvic fin bud relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001386 name: mesoderm pelvic fin bud namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-57 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001384 ! pelvic fin bud relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001387 name: pelvic fin skeleton namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-58 is_a: ZFA:0000027 ! paired fin skeleton relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001184 ! pelvic fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001388 name: epithelial mesenchymal boundary namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-59 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001269 ! regenerating fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001389 name: regeneration epithelium namespace: zebrafish_anatomy synonym: "epidermal cap" RELATED [] synonym: "wound epidermis" RELATED [] synonym: "wound epithelium" RELATED [] xref: ZFIN:ZDB-ANAT-060131-60 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001269 ! regenerating fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001390 name: pancreatic bud namespace: zebrafish_anatomy synonym: "pancreatic buds" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-060131-61 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000254 ! pancreas primordium relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: part_of ZFA:0001371 ! pancreatic system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001391 name: anterior lateral line ganglion namespace: zebrafish_anatomy def: "The anteror lateral line ganglia develops from cranial ectodermal placodes and contain sensory neurons that innervate the anterior lateral line system." [ZFIN:curator] synonym: "anterior lateral line ganglia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-060131-62 is_a: ZFA:0000120 ! lateral line ganglion relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001392 name: parapophysis 1 namespace: zebrafish_anatomy def: "Lateral projections from the first centrum in cyprinids, absent in catostomids, and absent in characiphysans (Fink and Fink, 1996)." [ZFIN:curator] synonym: "basipophysis 1" RELATED [] synonym: "lateral process 1" RELATED [] xref: ZFIN:ZDB-ANAT-060331-17 is_a: ZFA:0001362 ! parapophysis relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001167 ! vertebra 1 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001393 name: parapophysis 2 namespace: zebrafish_anatomy def: "Lateral projection from the second centrum, absent in Siluriformes (Fink and Fink, 1996)." [ZFIN:curator] synonym: "basipophysis" RELATED [] synonym: "lateral process 2" RELATED [] xref: ZFIN:ZDB-ANAT-060331-18 is_a: ZFA:0001362 ! parapophysis relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001168 ! vertebra 2 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001394 name: neural arch 3 namespace: zebrafish_anatomy def: "Neural arch 3 is expanded and fused to supraneural 3 as part of a neural complex roofing and protecting the neural canal." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-19 is_a: ZFA:0001066 ! neural arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001169 ! vertebra 3 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001395 name: neural arch 4 namespace: zebrafish_anatomy def: "Neural arch 4 is expanded and fused to supraneural 3 as part of the neural complex. A reduced neural spine projects from the posterior margin of the neural complex." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-20 is_a: ZFA:0001066 ! neural arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001170 ! vertebra 4 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001396 name: parapophysis/rib namespace: zebrafish_anatomy def: "The parapophysis + rib, fused to the centrum, extends laterally then angles anteroventrally. A thin plate, the os suspensorium fuses to its median surface." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-21 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001170 ! vertebra 4 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001397 name: post-Weberian supraneural namespace: zebrafish_anatomy def: "Posterior to the Weberian apparatus, otophysan supraneurals form as median, unpaired, rod- or platelike elements, as in other actinopterygians." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-22 is_a: ZFA:0000442 ! supraneural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001399 name: palatoquadrate cartilage namespace: zebrafish_anatomy synonym: "pterygoquadrate" RELATED [] synonym: "quadrate cartilage" RELATED [] xref: ZFIN:ZDB-ANAT-060331-24 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001400 name: ceratohyal cartilage namespace: zebrafish_anatomy def: "Bilaterally paired dumbbell-shaped cartilage with an expanded posterior tip and slightly narrower anterior tip." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-25 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001401 name: dorsal hyoid arch namespace: zebrafish_anatomy synonym: "dorsal visceral arch 2" RELATED [] xref: ZFIN:ZDB-ANAT-060331-26 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000444 ! suspensorium relationship: part_of ZFA:0001276 ! pharyngeal arch 2 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001402 name: ventral hyoid arch namespace: zebrafish_anatomy synonym: "ventral visceral arch 2" RELATED [] xref: ZFIN:ZDB-ANAT-060331-27 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001276 ! pharyngeal arch 2 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001403 name: supraethmoid namespace: zebrafish_anatomy def: "Dermal bone that first appears as paired ossifications in the membrane (dermis) dorsolateral to the ethmoid cartilage and anterolateral to the lateral ethmoids, later having the appearance of one butterfly-shaped element. Fused to the anterodorsal margain of the mesethmoid. Bordered anteriorly by the kinethmoid and posteriorly by the frontal." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-28 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001404 name: preethmoid bone namespace: zebrafish_anatomy def: "Small rounded to egg-shaped cartilage bone that sits in an anterolateral depression on the prevomer. Articulates with the autopalatine in all cypriniforms." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-29 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001405 ! ethmoid cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000351 ! olfactory region relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0001405 name: ethmoid cartilage namespace: zebrafish_anatomy def: "Bilaterally paired neurocranium cartilage which is initially plate-like and formed from the anterior fusion between the bilaterally paired trabecula crani. It grows dorsally between the laminae orbitonasales to attain a complex shape." [ZFIN:curator] synonym: "ethmoid plate" RELATED [] xref: ZFIN:ZDB-ANAT-060331-30 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000042 ! Juvenile:Days 30-44 relationship: part_of ZFA:0000351 ! olfactory region relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001406 name: kinethmoid bone namespace: zebrafish_anatomy def: "Small median unpaired dermal sesamoid bone in the premaxillary-ethmoid ligament between the mesethmoid and the premaxilla that enhances the protract ability of the upper jaw. It forms in the premaxillary-ethmoid ligament. The kinethmoid arose de novo in the ancestor of Cypriniformes, the only group within Ostariophysi, in which it is found (Fink and Fink, 1981)." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-31 is_a: ZFA:0001590 ! dermal bone relationship: develops_from ZFA:0000585 ! kinethmoid cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermal bone cranium relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001407 name: infraorbital 2 namespace: zebrafish_anatomy def: "Plate like dermal bone, variable in size, though usually one of the smallest in the series. Bears 2-3 neuromast pores enclosed within the infraorbital canal (Nelson, 1969)." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-32 is_a: ZFA:0000376 ! infraorbital relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001408 name: infraorbital 3 namespace: zebrafish_anatomy def: "Plate like dermal bone, variable in size, but usually largest in the series. Usually fused with IO4 (eg. Opsariichthys, Nelson (1969)). Usually bears 3 neuromast pores enclosed within the infraorbital canal (Nelson, 1969)." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-33 is_a: ZFA:0000376 ! infraorbital relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001409 name: infraorbital 4 namespace: zebrafish_anatomy def: "Plate like dermal bone. Usually fused with infraorbital 3." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-34 is_a: ZFA:0000376 ! infraorbital relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001410 name: orbital region namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060331-35 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001411 name: sclerotic bone namespace: zebrafish_anatomy def: "A pair of small dish-shaped bones that cap the anterior and posterior margin of the eyeball." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-36 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001509 ! sclerotic cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001410 ! orbital region relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001412 name: epiotic namespace: zebrafish_anatomy alt_id: ZFA:0000659 def: "Cartilage bone that contacts the pterotic anteriorly, the supraoccipital and parietal dorsally, and the exoccipital ventrally. The epiotic enclose the posterior semicircular canal of the inner ear and contribute to the hind margin of the cranium." [ZFIN:curator] synonym: "epioccipital" RELATED [] xref: ZFIN:ZDB-ANAT-060331-37 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001500 ! auditory capsule relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000189 ! otic region relationship: start ZFS:0000041 ! Larval:Days 21-29 [Term] id: ZFA:0001414 name: occipital region namespace: zebrafish_anatomy synonym: "basicranial region" RELATED [] xref: ZFIN:ZDB-ANAT-060331-39 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001415 name: pelvic radial 2 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060331-40 is_a: ZFA:0000508 ! pelvic radial relationship: develops_from ZFA:0001541 ! pelvic radial 2 cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001416 name: pelvic radial 3 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060331-41 is_a: ZFA:0000508 ! pelvic radial relationship: develops_from ZFA:0001540 ! pelvic radial 3 cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001417 name: pelvic radial 1 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060331-42 is_a: ZFA:0000508 ! pelvic radial relationship: develops_from ZFA:0001542 ! pelvic radial 1 cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001418 name: dorsal fin lepidotrichium namespace: zebrafish_anatomy def: "Lepidotrichium which is part of the dorsal fin." [ZFIN:curator] synonym: "dorsal fin lepidotrichia" RELATED PLURAL [] synonym: "dorsal fin ray" RELATED [] xref: ZFIN:ZDB-ANAT-060331-43 is_a: ZFA:0001554 ! lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001124 ! dorsal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001419 name: dorsal fin pterygiophore namespace: zebrafish_anatomy def: "A range of seven to nine rod-like internal median skeletal support structures of the dorsal fin, comprised of both bone and cartilage and found between vertebrae 11 and 18." [ZFIN:curator] synonym: "dorsal fin support" RELATED [] xref: ZFIN:ZDB-ANAT-060331-44 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001124 ! dorsal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001420 name: anal fin pterygiophore namespace: zebrafish_anatomy def: "A range of twelve to fourteen rod-like internal median skeletal support structures of the anal fin, comprised of both bone and cartilage and found between vertebrae 14 and 21." [ZFIN:curator] synonym: "anal fin radial" RELATED [] xref: ZFIN:ZDB-ANAT-060331-45 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000167 ! anal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001421 name: anal fin lepidotrichium namespace: zebrafish_anatomy def: "Lepidotrichium which is part of the anal fin." [ZFIN:curator] synonym: "anal fin lepidotrichia" RELATED PLURAL [] synonym: "anal fin ray" RELATED [] xref: ZFIN:ZDB-ANAT-060331-46 is_a: ZFA:0001554 ! lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000167 ! anal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001422 name: hyosymplectic cartilage namespace: zebrafish_anatomy def: "Bilaterally paired large cartilage that articulates with the chondrocranium dorsally, the opercle posteriorly, and the palatoquadrate cartilage anteriorly." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-47 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001401 ! dorsal hyoid arch relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001423 name: parachordal cartilage namespace: zebrafish_anatomy def: "Rod-shaped paired cartilages on either side of the notochord. They unite, forming the base of the chondrocranium and are replaced by the prootic bones." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-48 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001414 ! occipital region relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001424 name: chondrocranium namespace: zebrafish_anatomy alt_id: ZFA:0000377 def: "Cranial skeletal elements composed of cartilage and cartilage replacement bones." [ZFIN:curator] synonym: "chondocranium" RELATED [] synonym: "neurocranium" RELATED [] xref: ZFIN:ZDB-ANAT-060331-49 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000737 ! cranium relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001425 name: basal plate cartilage namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060331-50 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001423 ! parachordal cartilage relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001426 name: posterior naris namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060331-51 is_a: ZFA:0000550 ! naris relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001427 name: anterior naris namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060331-52 is_a: ZFA:0000550 ! naris relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001428 name: olfactory rosette namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060331-53 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001429 name: raphe nucleus namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060331-54 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000241 ! midline column relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001430 name: pneumatic duct namespace: zebrafish_anatomy def: "A duct connecting the esophagus to the posterior chamber of the swim bladder. Finney et al, 2006." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060816-5 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000204 ! esophagus relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001431 name: primitive olfactory epithelium namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060331-55 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000048 ! olfactory placode relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001432 name: anterior sclerotic bone namespace: zebrafish_anatomy def: "Sclerotic bone that is located anterior to the eye." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-56 is_a: ZFA:0001411 ! sclerotic bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001433 name: posterior sclerotic bone namespace: zebrafish_anatomy def: "Sclerotic bone that is located posterior to the eye." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-57 is_a: ZFA:0001411 ! sclerotic bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001434 name: floor plate neural tube namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060331-58 is_a: ZFA:0000022 ! floor plate relationship: develops_from ZFA:0000887 ! floor plate neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001135 ! neural tube relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001435 name: lateral wall neural tube namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060331-59 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001135 ! neural tube relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001436 name: roof plate neural tube namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060331-60 is_a: ZFA:0007058 ! roof plate relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001135 ! neural tube relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0001437 name: ductus communicans namespace: zebrafish_anatomy def: "The constriction between the anterior and posterior chambers of the swim bladder. There does not appear to be an identifiable sphincter in the ductus, and therefore other musculature may regulate its opening. Finney et al, 2006." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060816-6 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000076 ! swim bladder relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001438 name: coelom namespace: zebrafish_anatomy synonym: "body cavity" RELATED [] xref: ZFIN:ZDB-ANAT-060816-7 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001115 ! trunk relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001439 name: anatomical system namespace: zebrafish_anatomy def: "Anatomical group that has as its parts distinct anatomical structures interconnected by anatomical structures at a lower level of granularity." [ZFIN:curator] xref: CARO:0000011 xref: ZFIN:ZDB-ANAT-060816-8 is_a: ZFA:0001512 ! anatomical group relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001094 ! whole organism relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001440 name: rhombic lip namespace: zebrafish_anatomy def: "The interface between the dorsal neuroepithelium and the roofplate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain." [ZFIN:curator] synonym: "presumptive cerebellum" RELATED [] xref: ZFIN:ZDB-ANAT-060816-9 relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0000029 ! hindbrain relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001441 name: lower rhombic lip namespace: zebrafish_anatomy def: "Posterior portion of the rhombic lip contained within rhombomeres 2-8. Gives rise to several brainstem nuclei and choroid plexus." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060816-10 relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001440 ! rhombic lip relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001442 name: upper rhombic lip namespace: zebrafish_anatomy def: "Anterior-most region of dorsal hindbrain within rhombomere 1, adjacent the midbrain-hindbrain boundary." [ZFIN:curator] synonym: "cerebellar anlage" RELATED [] synonym: "presumptive cerebellum" RELATED [] xref: ZFIN:ZDB-ANAT-060816-11 relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001440 ! rhombic lip relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001443 name: choroid plexus namespace: zebrafish_anatomy def: "A tuft of capillaries that project into the ventricles of the brain and secretes cerebral spinal fluid. The choroid plexus is covered by a cuboidal epithelium which maintains the integrity of the blood-brain barrier." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060816-12 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001444 name: choroid plexus third ventricle namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-13 is_a: ZFA:0001443 ! choroid plexus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000161 ! third ventricle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001445 name: choroid plexus tectal ventricle namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-14 is_a: ZFA:0001443 ! choroid plexus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000159 ! tectal ventricle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001446 name: choroid plexus fourth ventricle namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-15 is_a: ZFA:0001443 ! choroid plexus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000110 ! fourth ventricle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001447 name: choroid plexus telencephalic ventricle namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-16 is_a: ZFA:0001443 ! choroid plexus relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000696 ! telencephalic ventricle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001448 name: ultimobranchial body namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-17 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001158 ! endocrine system relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0001449 name: mesenchyme pelvic fin namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-18 is_a: ZFA:0000393 ! mesenchyme relationship: develops_from ZFA:0001386 ! mesoderm pelvic fin bud relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001184 ! pelvic fin relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001450 name: apical ectodermal ridge pelvic fin namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-19 relationship: develops_from ZFA:0001385 ! apical ectodermal ridge pelvic fin bud relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001184 ! pelvic fin relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0001451 name: zone of polarizing activity pectoral fin bud namespace: zebrafish_anatomy def: "A small group of mesodermal cells located at the posterior margin of the developing fin bud. the ZPA is thought to produce retinoic acid and thereby provides positional information to the developing bud. Gibert et al., 2006." [ZFIN:curator] synonym: "ZPA" RELATED [] xref: ZFIN:ZDB-ANAT-060816-20 relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: part_of ZFA:0000789 ! mesoderm pectoral fin bud relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001452 name: zone of polarizing activity pelvic fin bud namespace: zebrafish_anatomy def: "A small group of mesodermal cells located at the posterior margin of the developing fin bud. the ZPA is thought to produce retinoic acid and thereby provides positional information to the developing bud. Gibert et al., 2006." [ZFIN:curator] synonym: "ZPA" RELATED [] xref: ZFIN:ZDB-ANAT-060816-21 relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: part_of ZFA:0001386 ! mesoderm pelvic fin bud relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001453 name: pectoral fin field namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-22 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0005042 ! posterior lateral plate mesoderm relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001454 name: pelvic fin field namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-23 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005042 ! posterior lateral plate mesoderm relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0001455 name: scapulocorocoid namespace: zebrafish_anatomy def: "The cartilage from which both the scapula and coracoid develop." [ZFIN:curator] synonym: "coraco-scapular cartilage" RELATED [] xref: ZFIN:ZDB-ANAT-060816-24 is_a: ZFA:0000257 ! pectoral fin cartilage relationship: end ZFS:0000041 ! Larval:Days 21-29 relationship: part_of ZFA:0000407 ! pectoral girdle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001456 name: pectoral fin endoskeletal disc namespace: zebrafish_anatomy def: "A plate-like chondrogenic condensation within the pectoral fin, which subdivides into individual radials by decomposition of extracellular matrix in the inter-radial mesenchyme (Grandel and Schulte-Merker, 1998)." [ZFIN:curator] synonym: "fin plate cartilage" RELATED [] xref: ZFIN:ZDB-ANAT-060816-25 is_a: ZFA:0000257 ! pectoral fin cartilage relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0001457 name: postcranial axial cartilage namespace: zebrafish_anatomy def: "Cartilage which is part of the axial skeleton." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060816-26 is_a: ZFA:0001501 ! cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001458 name: cranial cartilage namespace: zebrafish_anatomy def: "Cartilage which is part of the cranium." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060816-27 is_a: ZFA:0001501 ! cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000737 ! cranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001459 name: pelvic fin cartilage namespace: zebrafish_anatomy def: "Cartilage which is part of the pelvic fin." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060816-28 is_a: ZFA:0001543 ! paired fin cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001460 name: pharyngeal arch cartilage namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-29 is_a: ZFA:0001458 ! cranial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001216 ! splanchnocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001461 name: chondrocranium cartilage namespace: zebrafish_anatomy synonym: "neurocranium cartilage" RELATED [] xref: ZFIN:ZDB-ANAT-060816-30 is_a: ZFA:0001458 ! cranial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001424 ! chondrocranium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001462 name: somite border namespace: zebrafish_anatomy synonym: "somite border cell" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-060816-31 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000155 ! somite relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0001463 name: melanophore stripe namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-32 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001464 name: retinal outer nuclear layer namespace: zebrafish_anatomy def: "The layer within the retina where the photoreceptor cell bodies reside." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061101-8 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001465 name: photoreceptor inner segment layer namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061101-9 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000143 ! retinal photoreceptor layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001466 name: photoreceptor outer segment layer namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061101-10 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000143 ! retinal photoreceptor layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001467 name: pharyngeal mesoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061101-11 relationship: end ZFS:0000030 ! Pharyngula:Prim-15 relationship: part_of ZFA:0000056 ! pharynx relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001468 name: anterior lateral line system namespace: zebrafish_anatomy def: "The anterior lateral line system develops from cranial ectodermal placodes, situated between the eye and the ear, that give rise to both the neuromasts and the anterior lateral line sensory nerves that innervate the neuromasts. The anterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians and are innervated by several lateral line nerves, which project to the hindbrain. The anterior lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061101-12 is_a: ZFA:0000034 ! lateral line system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001469 name: lateral line namespace: zebrafish_anatomy def: "The lateral line consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head and body of all fishes and most amphibians. The lateral line develops from cranial ectodermal placodes situated behind the ear and between the eye and ear." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061101-13 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000034 ! lateral line system relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001470 name: anterior lateral line namespace: zebrafish_anatomy def: "The anterior lateral line consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The anterior lateral line develops from cranial ectodermal placodes situated between the eye and ear." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061101-14 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0005117 ! anterior lateral line primordium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001468 ! anterior lateral line system relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0001471 name: posterior lateral line system namespace: zebrafish_anatomy def: "The posterior lateral line system develops from cranial ectodermal placodes, situated behind the ear, that give rise to both the neuromasts and the posterior lateral line sensory nerves that innervate the neuromasts. The posterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The neuromasts are innervated by several lateral line nerves, which project primarily to the hindbrain. The posterior mechanosensory lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061101-15 is_a: ZFA:0000034 ! lateral line system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001472 name: anterior lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the anterior lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "neuromast anterior" RELATED [] xref: ZFIN:ZDB-ANAT-061101-16 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001473 name: deep blastomere namespace: zebrafish_anatomy def: "Cells (completely cleaved), located underneath the superficial blastomeres and internal to the marginal blastomeres. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061101-17 is_a: ZFA:0000093 ! blastomere relationship: end ZFS:0000015 ! Blastula:Dome relationship: start ZFS:0000007 ! Cleavage:64-cell [Term] id: ZFA:0001474 name: presumptive cardinal organ namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061101-18 is_obsolete: true [Term] id: ZFA:0001475 name: presumptive organ namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061101-19 is_obsolete: true [Term] id: ZFA:0001476 name: presumptive organ system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061101-20 is_obsolete: true [Term] id: ZFA:0001477 name: portion of tissue namespace: zebrafish_anatomy def: "Anatomical structure, that consists of similar cells and intercellular matrix, aggregated according to genetically determined spatial relationships." [ZFIN:curator] xref: CARO:0000043 xref: ZFIN:ZDB-ANAT-061101-21 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000019 ! Gastrula:Shield [Term] id: ZFA:0001478 name: anatomical cluster namespace: zebrafish_anatomy def: "Anatomical group that has its parts adjacent to one another." [ZFIN:curator] xref: CARO:0000041 xref: ZFIN:ZDB-ANAT-061101-22 is_a: ZFA:0001512 ! anatomical group relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000012 ! Blastula:High [Term] id: ZFA:0001479 name: lateral line nerve namespace: zebrafish_anatomy def: "Cranial nerves that carry afferent and efferent fibers for the lateral line system." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061101-23 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000034 ! lateral line system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001480 name: dorsal anterior lateral line nerve namespace: zebrafish_anatomy def: "Nerve fibers originating from the dorsal anterior lateral line ganglion. These rami innervate the otic, supraorbital, and infraorbital neuromasts." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061101-24 is_a: ZFA:0001479 ! lateral line nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000425 ! anterior lateral line nerve relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001481 name: ventral anterior lateral line nerve namespace: zebrafish_anatomy def: "Nerve fibers originating from the ventral anterior lateral line ganglion. These rami innervate the mandibular and opercular neuromasts." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061101-25 is_a: ZFA:0001479 ! lateral line nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000425 ! anterior lateral line nerve relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001482 name: middle lateral line nerve namespace: zebrafish_anatomy def: "Nerve fibers originating from the middle lateral line ganglion. These fibers innervate the middle lateral line." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061101-26 is_a: ZFA:0001479 ! lateral line nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000175 ! posterior lateral line nerve relationship: part_of ZFA:0005114 ! middle lateral line system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001483 name: middle lateral line ganglion namespace: zebrafish_anatomy def: "The middle lateral line ganglion develops from a cranial ectodermal placode and contains sensory neurons that innervate the middle lateral line." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061101-27 is_a: ZFA:0000120 ! lateral line ganglion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005114 ! middle lateral line system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001484 name: superficial blastomere namespace: zebrafish_anatomy def: "Cells (completely cleaved), located at the surface of the blastodisc, above the deep blastomeres. Kimmel et al, 1995." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061101-28 is_a: ZFA:0000093 ! blastomere relationship: end ZFS:0000015 ! Blastula:Dome relationship: start ZFS:0000007 ! Cleavage:64-cell [Term] id: ZFA:0001485 name: basal lamina namespace: zebrafish_anatomy def: "Acellular anatomical structure that consists of a thin sheet of fibrous proteins that underlie and support the cells of an epithelium. It separates the cells of an epithelium from any underlying tissue." [ZFIN:curator] xref: CARO:0000065 xref: ZFIN:ZDB-ANAT-070517-1 is_a: ZFA:0000382 ! acellular anatomical structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001486 name: epithelium namespace: zebrafish_anatomy def: "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina." [ZFIN:curator] xref: CARO:0000066 xref: ZFIN:ZDB-ANAT-070517-2 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001487 name: portion of organism substance namespace: zebrafish_anatomy def: "Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body." [ZFIN:curator] xref: CARO:0000006 xref: ZFIN:ZDB-ANAT-070517-3 is_a: ZFA:0100000 ! zebrafish anatomical entity relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001488 name: multi-tissue structure namespace: zebrafish_anatomy def: "Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types." [ZFIN:curator] xref: CARO:0000055 xref: ZFIN:ZDB-ANAT-070517-4 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001489 name: compound organ component namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of a compound organ." [ZFIN:curator] xref: CARO:0000019 xref: ZFIN:ZDB-ANAT-070517-5 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001490 name: cavitated compound organ namespace: zebrafish_anatomy def: "Compound organ that contains one or more macroscopic anatomical spaces." [ZFIN:curator] xref: CARO:0000072 xref: ZFIN:ZDB-ANAT-070517-6 is_a: ZFA:0000496 ! compound organ relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001491 name: solid compound organ namespace: zebrafish_anatomy def: "Compound organ that does not contain macroscopic anatomical spaces." [ZFIN:curator] xref: CARO:0000074 xref: ZFIN:ZDB-ANAT-070517-7 is_a: ZFA:0000496 ! compound organ relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001492 name: simple organ namespace: zebrafish_anatomy def: "Multi-tissue structure that is not part of a compound organ." [ZFIN:curator] xref: CARO:0000021 xref: ZFIN:ZDB-ANAT-070517-8 is_a: ZFA:0001488 ! multi-tissue structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001493 name: atypical epithelium namespace: zebrafish_anatomy def: "Epithelium that consists of epithelial cells not arranged in one or more layers." [ZFIN:curator] xref: CARO:0000071 xref: ZFIN:ZDB-ANAT-070517-9 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001494 name: multilaminar epithelium namespace: zebrafish_anatomy def: "Epithelium that consists of more than one layer of epithelial cells." [ZFIN:curator] xref: CARO:0000069 xref: ZFIN:ZDB-ANAT-070517-10 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001495 name: unilaminar epithelium namespace: zebrafish_anatomy def: "Epithelium that consists of a single layer of epithelial cells." [ZFIN:curator] xref: CARO:0000073 xref: ZFIN:ZDB-ANAT-070517-11 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001496 name: simple columnar epithelium namespace: zebrafish_anatomy def: "Unilaminar epithelium that consists of a single layer of columnar cells." [ZFIN:curator] xref: CARO:0000068 xref: ZFIN:ZDB-ANAT-070517-12 is_a: ZFA:0001495 ! unilaminar epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001497 name: simple cuboidal epithelium namespace: zebrafish_anatomy def: "Unilaminar epithelium that consists of a single layer of cuboidal cells." [ZFIN:curator] xref: CARO:0000067 xref: ZFIN:ZDB-ANAT-070517-13 is_a: ZFA:0001495 ! unilaminar epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001498 name: simple squamous epithelium namespace: zebrafish_anatomy def: "Unilaminar epithelium that consists of a single layer of squamous cells." [ZFIN:curator] xref: CARO:0000070 xref: ZFIN:ZDB-ANAT-070517-14 is_a: ZFA:0001495 ! unilaminar epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001499 name: esophageal epithelium namespace: zebrafish_anatomy def: "Simple columnar epithelium that lines the esophagus. Chen et al, 2007." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-15 is_a: ZFA:0001496 ! simple columnar epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000204 ! esophagus relationship: part_of ZFA:0005123 ! gut epithelium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001500 name: auditory capsule namespace: zebrafish_anatomy def: "Bilaterally paired cartilage encasing the semicircular canals of the inner ear." [ZFIN:curator] synonym: "otic capsule" RELATED [] xref: ZFIN:ZDB-ANAT-070517-16 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001501 name: cartilage namespace: zebrafish_anatomy def: "Portion of tissue which is connective tissue composed of collagen and/or elastin fibers and chondrocytes. Cartilage is avascular and provides both skeletal functions and a framework upon which bone is deposited." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-17 is_a: ZFA:0001632 ! portion of connective tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001502 name: epiphyseal bar namespace: zebrafish_anatomy def: "Bilaterally paired medial bar of cartilage formed at midorbit through medial chondrification from triangles of cartilage that later form the junction of the taeniae marginales anterior, taeniae marginales posterior and the epiphyseal bar." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-18 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001503 name: lamina orbitonasalis namespace: zebrafish_anatomy def: "Cranial cartilage which is bilaterally paired and develops as a dorsal plate-like projection of the anterolateral ethmoid plate, which are oriented perpendicular to the ethmoid plate. It fuses dorsally to the taenia marginalis anterior, and it joins the ethmoid cartilage medially." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-19 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001504 name: occipital arch cartilage namespace: zebrafish_anatomy def: "Cranial cartilage which is a paired anterodorsal projection of the posterior end of the parachordal cartilage. It lies lateral to the notochord, just anterior to the posterior tip of the otic capsule. The bilaterally paired occipital arch cartilages fuse anterodorsally to the posterior edges of the auditory capsules and meet medially as the tectum synoticum (by 12 dpf)." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-20 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000038 ! Larval:Day 6 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001505 name: taenia marginalis anterior namespace: zebrafish_anatomy def: "Cartilage bar (bilaterally paired) that grows anteroventrally from the epiphyseal bar to join the anterolatera1 edge of the ethmoid plate." [ZFIN:curator] synonym: "orbital cartilage" RELATED [] xref: ZFIN:ZDB-ANAT-070517-21 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001506 name: tectum synoticum namespace: zebrafish_anatomy def: "Unpaired thin dorsal sheet of cartilage that partially covers the posterior chondrocranium." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-22 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001507 name: trabecula cranii namespace: zebrafish_anatomy def: "Paired thin medially aligned bar of cartilage that extends from the anterior end of the chondrocranium to just anterior to the anterior end of the notochord. The posterior ends of the trabeculae cranii are continuous with the parachordal cartilages, and they enclose the hypophyseal fenestra." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-23 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001321 ! neurocranial trabecula relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0001508 name: trabecula communis namespace: zebrafish_anatomy def: "Cartilage formed via medial fusion between bilaterally paired trabecula crani." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-24 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001321 ! neurocranial trabecula relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001509 name: sclerotic cartilage namespace: zebrafish_anatomy def: "Bilaterally paired thin continuous band of cartilage that sagitally encircles the eye." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-25 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001510 name: basihyal cartilage namespace: zebrafish_anatomy def: "Median, anterior-most cartilage of hyoid arch. It chondrifies between the anterior tips of the ceratohyal cartilages, anterior to the first copula." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-26 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001511 name: interhyal cartilage namespace: zebrafish_anatomy alt_id: ZFA:0000218 def: "The interhyal is a small rod-like element that connects the ventral and dorsal parts of the hyoid arch. It articulates laterally with the posterior end of the epihyal and medially at the cartilaginous junction between the hyomandibula and the symplectic. It remains cartilaginous in adult zebrafish and other cypriniforms." [ZFIN:curator] synonym: "interhyal bone" RELATED [] synonym: "stylohyal" RELATED [] xref: ZFIN:ZDB-ANAT-070517-27 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001402 ! ventral hyoid arch relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0001512 name: anatomical group namespace: zebrafish_anatomy alt_id: ZFA:0001255 def: "Anatomical structure consisting of at least two non-overlapping organs, multi-tissue aggregates or portion of tissues or cells of different types that does not constitute an organism, organ, multi-tissue aggregate, or portion of tissue." [ZFIN:curator] xref: CARO:0000054 xref: ZFIN:ZDB-ANAT-070517-28 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001513 name: dermomyotome namespace: zebrafish_anatomy def: "Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-29 relationship: develops_from ZFA:0000155 ! somite relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001514 name: bone namespace: zebrafish_anatomy def: "Portion of tissue which is calcified connective tissue making up the structural elements of the skeletal system." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-116 is_a: ZFA:0001632 ! portion of connective tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001515 name: taenia marginalis posterior namespace: zebrafish_anatomy def: "Cartilage bar (bilaterally paired) that is first visible as an anterior extension of the auditory capsule. It grows anteriorly toward the middle of the orbit where it is connected to its mate on the other side by the epiphyseal bar." [ZFIN:curator] synonym: "orbital cartilage" RELATED [] xref: ZFIN:ZDB-ANAT-070928-117 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001516 name: ceratobranchial cartilage namespace: zebrafish_anatomy def: "Small rod-like cartilage that forms between the hypobranchial and the epibranchial cartilage." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-118 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001517 name: ceratobranchial 2 cartilage namespace: zebrafish_anatomy def: "Small rod-like cartilage that forms between hypobranchial 2 and epibranchial 2." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-119 is_a: ZFA:0001516 ! ceratobranchial cartilage relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0001518 name: ceratobranchial 3 cartilage namespace: zebrafish_anatomy def: "Small rod-like cartilage that forms between hypobranchial 3 and epibranchial 3." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-120 is_a: ZFA:0001516 ! ceratobranchial cartilage relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0001519 name: ceratobranchial 4 cartilage namespace: zebrafish_anatomy def: "Small rod-like cartilage that forms between hypobranchial 4 and epibranchial 4." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-121 is_a: ZFA:0001516 ! ceratobranchial cartilage relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0001520 name: ceratobranchial 1 cartilage namespace: zebrafish_anatomy def: "Small rod-like cartilage that forms between hypobranchial 1 and epibranchial 1." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-122 is_a: ZFA:0001516 ! ceratobranchial cartilage relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001521 name: ceratobranchial 5 cartilage namespace: zebrafish_anatomy def: "Small rod-like cartilage that forms between hypobranchial 5 and epibranchial 5." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-123 is_a: ZFA:0001516 ! ceratobranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001522 name: hypobranchial cartilage namespace: zebrafish_anatomy def: "Small rod-like cartilage that forms between the median copulae and the ceratobranchial cartilages." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-124 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0001523 name: hypobranchial 4 cartilage namespace: zebrafish_anatomy def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 4; these are not obviously present in mature specimens, due either to resorption or fusion to the cartilaginous anterior tip of ceratobranchial 4." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-125 is_a: ZFA:0001522 ! hypobranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001524 name: hypobranchial 1 cartilage namespace: zebrafish_anatomy def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 1, lateral to copula 1." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-126 is_a: ZFA:0001522 ! hypobranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001525 name: hypobranchial 2 cartilage namespace: zebrafish_anatomy def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 2, lateral to copula 1." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-127 is_a: ZFA:0001522 ! hypobranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001526 name: hypobranchial 3 cartilage namespace: zebrafish_anatomy def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 3, lateral to copula 1." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-128 is_a: ZFA:0001522 ! hypobranchial cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001527 name: epibranchial cartilage namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-129 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001528 name: epibranchial 1 cartilage namespace: zebrafish_anatomy def: "Small rod-like cartilage that forms between the lateral tip of ceratobranchial 1 and the medial end of pharyngobranchial 1." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-130 is_a: ZFA:0001527 ! epibranchial cartilage relationship: end ZFS:0000040 ! Larval:Days 14-20 relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001529 name: epibranchial 3 cartilage namespace: zebrafish_anatomy def: "Small rod-like cartilage that forms between the lateral tip of ceratobranchial 3 and the medial end of pharyngobranchial 3." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-131 is_a: ZFA:0001527 ! epibranchial cartilage relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001530 name: epibranchial 2 cartilage namespace: zebrafish_anatomy def: "Small rod-like cartilage that forms between the lateral tip of ceratobranchial 2 and the medial end of pharyngobranchial 2." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-132 is_a: ZFA:0001527 ! epibranchial cartilage relationship: end ZFS:0000040 ! Larval:Days 14-20 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001531 name: epibranchial 4 cartilage namespace: zebrafish_anatomy def: "Small rod-like cartilage that forms between the lateral tip of ceratobranchial 4 and the medial end of pharyngobranchial 4." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-133 is_a: ZFA:0001527 ! epibranchial cartilage relationship: end ZFS:0000039 ! Larval:Days 7-13 relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001532 name: axial bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-134 is_obsolete: true [Term] id: ZFA:0001533 name: pharyngobranchial cartilage namespace: zebrafish_anatomy def: "Paired cartilages that project medially from the medial tips of epibranchials." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-135 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001534 name: pharyngobranchial 3 cartilage namespace: zebrafish_anatomy def: "Paired elongate cartilages that lie posteromedial to epibranchial 2 and medial to epibranchial 3." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-136 is_a: ZFA:0001533 ! pharyngobranchial cartilage relationship: end ZFS:0000040 ! Larval:Days 14-20 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001535 name: median fin cartilage namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-137 is_a: ZFA:0001457 ! postcranial axial cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001536 name: pharyngobranchial 2 cartilage namespace: zebrafish_anatomy def: "Paired disc-like cartilage lying medial to and between the medial tips of epibranchials 1 and 2." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-138 is_a: ZFA:0001533 ! pharyngobranchial cartilage relationship: end ZFS:0000041 ! Larval:Days 21-29 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001537 name: mesocorocoid cartilage namespace: zebrafish_anatomy def: "Cartilage that develops initially on the medial side of the coraco-scapular cartilage." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-139 is_a: ZFA:0000257 ! pectoral fin cartilage relationship: end ZFS:0000040 ! Larval:Days 14-20 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001538 name: pelvic radial cartilage namespace: zebrafish_anatomy def: "Small cartilage that forms at the posterior edge of the basipterygium." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-140 is_a: ZFA:0001459 ! pelvic fin cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001539 name: basipterygium cartilage namespace: zebrafish_anatomy def: "Bilaterally paired small, rodlike cartilages on the ventral surface of the abdomen (present at 7.9 mm). Their posterior tips expand laterally, forming L-shaped cartilages. Medially, a posterior spur of cartilage develops, which will later ossify as the ischiac process (Weitzman 1962)." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-141 is_a: ZFA:0001459 ! pelvic fin cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001540 name: pelvic radial 3 cartilage namespace: zebrafish_anatomy def: "Small cartilage that forms at the posterior and medial edge of the basipterygium." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-142 is_a: ZFA:0001538 ! pelvic radial cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001541 name: pelvic radial 2 cartilage namespace: zebrafish_anatomy def: "Small cartilage with a long posterior process and a shorter lateral one that forms at the posterior edge of the basipterygium, between radial cartilages 1 and 2." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-143 is_a: ZFA:0001538 ! pelvic radial cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001542 name: pelvic radial 1 cartilage namespace: zebrafish_anatomy def: "Small cartilage that forms at the posterior and lateral edge of the basipterygium." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-144 is_a: ZFA:0001538 ! pelvic radial cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001543 name: paired fin cartilage namespace: zebrafish_anatomy def: "Cartilage which is part of one of the paired fins." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-145 is_a: ZFA:0001501 ! cartilage relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000027 ! paired fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001544 name: chondrocranium bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-146 is_obsolete: true [Term] id: ZFA:0001545 name: cranial bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-147 is_obsolete: true [Term] id: ZFA:0001546 name: pharyngeal arch bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-148 is_obsolete: true [Term] id: ZFA:0001547 name: dermatocranium bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-149 is_obsolete: true [Term] id: ZFA:0001548 name: axial fin bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-150 is_obsolete: true [Term] id: ZFA:0001549 name: paired fin bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-151 is_obsolete: true [Term] id: ZFA:0001550 name: caudal fin lepidotrichium namespace: zebrafish_anatomy def: "Lepidotrichium which is part of the caudal fin." [ZFIN:curator] synonym: "caudal fin lepidotrichia" RELATED PLURAL [] synonym: "caudal fin ray" RELATED [] xref: ZFIN:ZDB-ANAT-070928-152 is_a: ZFA:0001554 ! lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001551 name: pectoral fin lepidotrichium namespace: zebrafish_anatomy def: "Lepidotrichium which is part of the pectoral fin." [ZFIN:curator] synonym: "pectoral fin lepidotrichia" RELATED PLURAL [] synonym: "pectoral fin ray" RELATED [] xref: ZFIN:ZDB-ANAT-070928-153 is_a: ZFA:0001554 ! lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001552 name: pelvic fin lepidotrichium namespace: zebrafish_anatomy def: "Lepidotrichium which is part of the pelvic fin." [ZFIN:curator] synonym: "pelvic fin lepidotrichia" RELATED PLURAL [] synonym: "pelvic fin ray" RELATED [] xref: ZFIN:ZDB-ANAT-070928-154 is_a: ZFA:0001554 ! lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001553 name: fin bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-155 is_obsolete: true [Term] id: ZFA:0001554 name: lepidotrichium namespace: zebrafish_anatomy def: "Lepidotrichia are bony, bilatterally paired, segmented dermal ossifications extending from the distal radials. They are formed from paired hemitrichia surrounding actinotrichia. There are usually two more lepidotrichia than distal radials." [ZFIN:curator] synonym: "lepidotrichia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-070928-156 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001555 name: epibranchial ganglion namespace: zebrafish_anatomy def: "Cranial ganglion which develops from an epibranchial placode." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-157 is_a: ZFA:0000013 ! cranial ganglion relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001556 name: sympathetic chain ganglion namespace: zebrafish_anatomy def: "Trunk ganglion which is part of a bilaterally paired set of sympathetic ganglia located anterior and lateral to the spinal cord." [ZFIN:curator] synonym: "paravertebral ganglion" RELATED [] xref: ZFIN:ZDB-ANAT-070928-158 is_a: ZFA:0001573 ! trunk ganglion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001576 ! sympathetic nervous system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001557 name: pronephric glomerulus namespace: zebrafish_anatomy def: "Paired highly vascularized structures of the pronephros which are fused at the midline. Responsible for blood filtration and begins to function between 40 and 48hpf. Drummond, 2000." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-159 relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000151 ! pronephros relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001558 name: pronephric tubule namespace: zebrafish_anatomy def: "Bilaterally paired tubes connecting the pronephric glomeruli to the pronephric ducts. In zebrafish and other teleosts, the pronephric nephron and tubules form after the pronephric duct, connecting to the anterior-most tip of the pronephric ducts. Drummond, 2000. This region may be analogous to the ciliated neck segment of mammalian and other fish nephrons. href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-071029-9'>Wingert, 2007." [ZFIN:curator] synonym: "ciliated neck segment" RELATED [] xref: ZFIN:ZDB-ANAT-070928-160 relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000151 ! pronephros relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001559 name: vertebral column namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-161 is_a: ZFA:0000317 ! postcranial axial skeleton relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001560 name: hypural 1 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-162 is_a: ZFA:0000364 ! hypural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0001561 name: hypural 2 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-163 is_a: ZFA:0000364 ! hypural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000037 ! Larval:Day 5 [Term] id: ZFA:0001562 name: hypural 3 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-164 is_a: ZFA:0000364 ! hypural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000038 ! Larval:Day 6 [Term] id: ZFA:0001563 name: hypural 4 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-165 is_a: ZFA:0000364 ! hypural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001564 name: hypural 5 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-166 is_a: ZFA:0000364 ! hypural relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001565 name: oocyte stage II namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-167 is_a: ZFA:0001109 ! oocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001265 ! ovarian follicle stage II relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0001566 name: oocyte stage III namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-168 is_a: ZFA:0001109 ! oocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001266 ! ovarian follicle stage III relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0001567 name: oocyte stage I namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-169 is_a: ZFA:0001109 ! oocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001263 ! ovarian follicle stage I relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0001568 name: oocyte stage IV namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-170 is_a: ZFA:0001109 ! oocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001264 ! ovarian follicle stage IV relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0001569 name: oocyte stage V namespace: zebrafish_anatomy synonym: "mature egg" RELATED [] synonym: "unactivated egg" RELATED [] xref: ZFIN:ZDB-ANAT-070928-171 is_a: ZFA:0001109 ! oocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0001570 name: unfertilized egg namespace: zebrafish_anatomy synonym: "activated oocyte" RELATED [] xref: ZFIN:ZDB-ANAT-070928-172 is_a: ZFA:0001109 ! oocyte relationship: end ZFS:0000001 ! Zygote:1-cell relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001571 name: postovulatory follicle namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-173 is_a: ZFA:0001110 ! ovarian follicle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0001572 name: superior cervical ganglion namespace: zebrafish_anatomy def: "Trunk ganglion which is bilaterally paired and located at the anterior end of the sympathetic ganglion chain." [ZFIN:curator] synonym: "superior sympathetic cervical ganglion" RELATED [] xref: ZFIN:ZDB-ANAT-070928-174 is_a: ZFA:0001573 ! trunk ganglion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001576 ! sympathetic nervous system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001573 name: trunk ganglion namespace: zebrafish_anatomy def: "Ganglion which is located in the trunk." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-175 is_a: ZFA:0000190 ! ganglion relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0001574 name: autonomic nervous system namespace: zebrafish_anatomy synonym: "ANS" RELATED [] xref: ZFIN:ZDB-ANAT-070928-176 is_a: ZFA:0000396 ! nervous system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001575 name: parasympathetic nervous system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-177 is_a: ZFA:0001574 ! autonomic nervous system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001576 name: sympathetic nervous system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-178 is_a: ZFA:0001574 ! autonomic nervous system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001577 name: premaxilla ascending process namespace: zebrafish_anatomy def: "Process of the premaxilla that extends posteriorly and overlays the mesethmoid." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-179 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000567 ! premaxilla relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001578 name: anterior dorsomedial process of autopalatine namespace: zebrafish_anatomy def: "In cypriniforms the anterior portion of the palatine has a dorsomedial process which abuts against the mesethmoid. Such a process is not present in other ostariophysans or in other primitive teleosts." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-180 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000620 ! autopalatine relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001579 name: ural vertebra 2 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-071024-1 is_a: ZFA:0001189 ! vertebra relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001580 name: neurocranium namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-071024-2 is_a: ZFA:0000737 ! cranium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001581 name: ural centrum 2 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-071024-3 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001579 ! ural vertebra 2 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001582 name: non-Weberian precaudal vertebra namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-071024-4 is_a: ZFA:0000263 ! precaudal vertebra relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001583 name: preural centrum 1+ ural centrum 1 namespace: zebrafish_anatomy def: "Vertebra which is the fused centra of preural 1 and ural 1. These elements do not develop independently in zebrafish. Bird and Mabee, 2003." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-071024-5 is_a: ZFA:0001189 ! vertebra relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000862 ! caudal fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001584 name: caudal procurrent ray namespace: zebrafish_anatomy def: "Caudal fin ray that is located anterior to the principal caudal fin rays. Caudal procurrent rays are unbranched." [ZFIN:curator] synonym: "caudal procurrent lepidotrichium" RELATED [] xref: ZFIN:ZDB-ANAT-071024-6 is_a: ZFA:0001550 ! caudal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001585 name: caudal principal ray namespace: zebrafish_anatomy def: "Caudal fin lepidotrichium that is adjacent to a branched ray. Counts of caudal principal rays are taken as the number of branched rays plus two adjacent unbranched rays and counts are typically reported as, for example: 1,8,7,1 (1 unbranched and 8 branched upper rays, 7 branched and 1 unbranched lower rays)." [ZFIN:curator] synonym: "caudal principal lepidotrichium" RELATED [] xref: ZFIN:ZDB-ANAT-071024-7 is_a: ZFA:0001550 ! caudal fin lepidotrichium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001586 name: pectoral fin radial namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-071024-8 is_a: ZFA:0000271 ! radial relationship: develops_from ZFA:0001456 ! pectoral fin endoskeletal disc relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001587 name: pectoral fin proximal radial namespace: zebrafish_anatomy synonym: "radial" RELATED [] xref: ZFIN:ZDB-ANAT-071024-9 is_a: ZFA:0001586 ! pectoral fin radial relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001588 name: pectoral fin distal radial namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-071024-10 is_a: ZFA:0001586 ! pectoral fin radial relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001589 name: propterygium namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-071024-11 is_a: ZFA:0001588 ! pectoral fin distal radial relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001590 name: dermal bone namespace: zebrafish_anatomy def: "Intramembranous bone that forms superficially in the organism." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-071024-12 is_a: ZFA:0001635 ! intramembranous bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001591 name: endochondral bone namespace: zebrafish_anatomy def: "Replacement bone that forms within cartilage." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-071024-13 is_a: ZFA:0001628 ! replacement bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001592 name: claustrum bone namespace: zebrafish_anatomy def: "Bone that is bilaterally paired endochondral bone with extensions of membrane bone forming part of a dorsolateral protective wall around the neural canal between the back of the skull and the beginning of the neural arch series. The first Weberian ossicle. Most recently, de Pinna and Grande (2003) have proposed the claustrum is homologous to the accessory neural arch of lower teleosts." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-071024-14 is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone relationship: develops_from ZFA:0000637 ! claustrum cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000040 ! Larval:Days 14-20 [Term] id: ZFA:0001593 name: quadrate ventral process namespace: zebrafish_anatomy def: "An endochondral bone that is the ventral, posteriorly-oriented bony extension of the quadrate." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-72 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000621 ! quadrate relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001594 name: preopercle horizontal limb namespace: zebrafish_anatomy def: "A dermal bone that is the lower, horizontal portion of the preopercle bone." [ZFIN:curator] synonym: "preopercle horizontal arm" RELATED [] synonym: "preopercle lower limb" RELATED [] xref: ZFIN:ZDB-ANAT-080417-73 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000264 ! preopercle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001595 name: preopercle vertical limb namespace: zebrafish_anatomy def: "A dermal bone that is the upper, vertical portion of the preopercle bone." [ZFIN:curator] synonym: "preopercle upper limb" RELATED [] synonym: "preopercle vertical arm" RELATED [] xref: ZFIN:ZDB-ANAT-080417-74 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000264 ! preopercle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001596 name: joint namespace: zebrafish_anatomy def: "Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-75 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001597 name: exoccipital posteroventral region namespace: zebrafish_anatomy def: "Endochondral bone which is the posteroventral region of the exoccipital bone." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-76 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000661 ! exoccipital relationship: part_of ZFA:0001627 ! lagenar capsule relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001598 name: basioccipital posterodorsal region namespace: zebrafish_anatomy def: "Endochondral bone which is the posterodorsal region of the basioccipital bone." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-77 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000472 ! basioccipital relationship: part_of ZFA:0001627 ! lagenar capsule relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001599 name: os suspensorium medial flange namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-080417-78 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001171 ! os suspensorium relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001600 name: neural spine 4 namespace: zebrafish_anatomy def: "Neural spine that is located on the fourth vertebra." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-79 is_a: ZFA:0001336 ! neural spine relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001601 name: manubrium namespace: zebrafish_anatomy synonym: "anterior process" RELATED [] synonym: "horiztonal process" RELATED [] synonym: "manubrium incudus" RELATED [] xref: ZFIN:ZDB-ANAT-080417-80 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000525 ! intercalarium relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001602 name: intercalarium ascending process namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-080417-81 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000525 ! intercalarium relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001603 name: intercalarium articulating process namespace: zebrafish_anatomy synonym: "articular process" RELATED [] xref: ZFIN:ZDB-ANAT-080417-82 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000525 ! intercalarium relationship: start ZFS:0000039 ! Larval:Days 7-13 [Term] id: ZFA:0001604 name: caudal fin upper lobe namespace: zebrafish_anatomy def: "Surface structure that is the dorsal portion of the caudal fin." [ZFIN:curator] synonym: "caudal fin dorsal lobe" RELATED [] xref: ZFIN:ZDB-ANAT-080417-83 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001058 ! caudal fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001605 name: caudal fin lower lobe namespace: zebrafish_anatomy def: "Surface structure that is the ventral portion of the caudal fin." [ZFIN:curator] synonym: "caudal fin ventral lobe" RELATED [] xref: ZFIN:ZDB-ANAT-080417-84 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001058 ! caudal fin relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001606 name: pharyngeal arch 3 namespace: zebrafish_anatomy synonym: "branchial arch 1" RELATED [] xref: ZFIN:ZDB-ANAT-080417-85 is_a: ZFA:0001613 ! pharyngeal arch 3-7 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001607 name: pharyngeal arch 4 namespace: zebrafish_anatomy synonym: "branchial arch 2" RELATED [] xref: ZFIN:ZDB-ANAT-080417-86 is_a: ZFA:0001613 ! pharyngeal arch 3-7 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001608 name: pharyngeal arch 5 namespace: zebrafish_anatomy synonym: "branchial arch 3" RELATED [] xref: ZFIN:ZDB-ANAT-080417-87 is_a: ZFA:0001613 ! pharyngeal arch 3-7 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001609 name: pharyngeal arch 6 namespace: zebrafish_anatomy synonym: "branchial arch 4" RELATED [] xref: ZFIN:ZDB-ANAT-080417-88 is_a: ZFA:0001613 ! pharyngeal arch 3-7 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001610 name: pharyngeal arch 7 namespace: zebrafish_anatomy synonym: "branchial arch 5" RELATED [] xref: ZFIN:ZDB-ANAT-080417-89 is_a: ZFA:0001613 ! pharyngeal arch 3-7 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001611 name: pharyngeal arch 2 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-080417-90 is_a: ZFA:0001306 ! pharyngeal arch relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001612 name: pharyngeal arch 1 namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-080417-91 is_a: ZFA:0001306 ! pharyngeal arch relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001613 name: pharyngeal arch 3-7 namespace: zebrafish_anatomy alt_id: ZFA:0000515 synonym: "branchial arch" RELATED [] synonym: "gill arch" RELATED [] xref: ZFIN:ZDB-ANAT-080417-92 is_a: ZFA:0001306 ! pharyngeal arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000354 ! gill relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0001614 name: atrial endocardium namespace: zebrafish_anatomy def: "Endocardium that is part of the atrium." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-93 is_a: ZFA:0001320 ! endocardium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000471 ! atrium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001615 name: ventricular endocardium namespace: zebrafish_anatomy def: "Endocardium that is part of the cardiac ventricle." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-94 is_a: ZFA:0001320 ! endocardium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001616 name: atrioventricular canal endocardium namespace: zebrafish_anatomy def: "Endocardium that is part of the atrioventricular canal." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-95 is_a: ZFA:0001320 ! endocardium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001315 ! atrioventricular canal relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001617 name: otolith namespace: zebrafish_anatomy alt_id: ZFA:0000139 def: "MERGED DEFINITION: TARGET DEFINITION: Portion of organism substance composed of calcium carbonate located in the otolith organ. -------------------- SOURCE DEFINITION: Brightly refractile stone-like organ within the otic vesicle and positioned over a sensory macula; two form in each vesicle during the late segmentation period. Kimmel et al, 1995. (Also see Anatomical Atlas entry for otolith by T. Whitfield.)" [ZFIN:curator] synonym: "immature otolith" RELATED [] synonym: "immature otoliths" RELATED [] xref: ZFIN:ZDB-ANAT-080417-96 is_a: ZFA:0001487 ! portion of organism substance relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000051 ! otic vesicle relationship: part_of ZFA:0000559 ! otolith organ relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001618 name: pons namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-080417-97 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000029 ! hindbrain relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001619 name: optic fiber layer namespace: zebrafish_anatomy def: "Fiber layer adjacent the retinal ganglion cell layer which is comprised of their axons as they traverse to the optic nerve. Leake et al, 1999." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-98 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000046 ! retinal neural layer relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0001620 name: proximal convoluted tubule namespace: zebrafish_anatomy def: "Most anterior portion of the pronephric duct (or tubule as described by Wingert et al, 2007). Wingert, 2007." [ZFIN:curator] synonym: "PCT" RELATED [] xref: ZFIN:ZDB-ANAT-080417-99 relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000150 ! pronephric duct relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001621 name: proximal straight tubule namespace: zebrafish_anatomy def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which is just posterior to the proximal convoluted tubule. Wingert, 2007." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-100 relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000150 ! pronephric duct relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001622 name: distal early tubule namespace: zebrafish_anatomy def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which is just posterior to the proximal straight tubule. Wingert, 2007." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-101 relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000150 ! pronephric duct relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001623 name: posterior pronephric duct namespace: zebrafish_anatomy def: "Most posterior portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which ends at the cloacal chamber at the pronephric duct opening. Wingert, 2007." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-102 relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000150 ! pronephric duct relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001624 name: distal late tubule namespace: zebrafish_anatomy def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which is just posterior to the distal late tubule. Wingert, 2007." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-103 relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0000150 ! pronephric duct relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001625 name: optic nerve head namespace: zebrafish_anatomy def: "Portion of cranial nerve II where large fasicles of axons from the optic fiber layer come together prior to leaving the eye." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-104 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000435 ! cranial nerve II relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001626 name: cerebral spinal fluid namespace: zebrafish_anatomy def: "Portion of organism substance that is a clear fluid that occupies the subarachnoid space and the ventricular system around and inside the brain." [ZFIN:curator] synonym: "CSF" RELATED [] xref: ZFIN:ZDB-ANAT-080417-105 is_a: ZFA:0001487 ! portion of organism substance relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001627 name: lagenar capsule namespace: zebrafish_anatomy def: "Anatomical cluster that consists of a bulla formed by the exoccipital and basioccipital bones, and surrounds the lagena." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-106 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001628 name: replacement bone namespace: zebrafish_anatomy def: "Bone that forms as a replacement of another structural tissue." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-107 is_a: ZFA:0001514 ! bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001629 name: perichordal bone namespace: zebrafish_anatomy def: "Replacement bone that forms within the connective tissue surrounding the notochord." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-108 is_a: ZFA:0001628 ! replacement bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001630 name: perichondral bone namespace: zebrafish_anatomy def: "Replacement bone that forms within the connective tissue surrounding cartilage." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-109 is_a: ZFA:0001628 ! replacement bone relationship: develops_from ZFA:0001634 ! perichondrium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001631 name: notochordal ossification namespace: zebrafish_anatomy def: "Perichordal bone that surrounds the anterior tip of the notochord." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-110 is_a: ZFA:0001629 ! perichordal bone relationship: develops_from ZFA:0001633 ! perichordal connective tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001632 name: portion of connective tissue namespace: zebrafish_anatomy def: "Portion of tissue that consists of mesodermally derived cells and intercellular matrix comprised of protein fibers and carbohydrates, which supports, ensheathes and binds together other tissues." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-111 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001633 name: perichordal connective tissue namespace: zebrafish_anatomy def: "Portion of connective tissue which surrounds the notochord." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-112 is_a: ZFA:0001632 ! portion of connective tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001634 name: perichondrium namespace: zebrafish_anatomy def: "Portion of connective tissue which surrounds cartilage." [ZFIN:curator] synonym: "cartilage connective tissue" RELATED [] xref: ZFIN:ZDB-ANAT-080417-113 is_a: ZFA:0001632 ! portion of connective tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001635 name: intramembranous bone namespace: zebrafish_anatomy def: "Bone that forms directly within mesenchyme, and does not replace other tissues." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-114 is_a: ZFA:0001514 ! bone relationship: develops_from ZFA:0000393 ! mesenchyme relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001636 name: membrane bone namespace: zebrafish_anatomy def: "Intramembranous bone that forms deep in the organism." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-115 is_a: ZFA:0001635 ! intramembranous bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001637 name: bony projection namespace: zebrafish_anatomy def: "Portion of connective tissue that is an extension of a bone." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-116 is_a: ZFA:0001632 ! portion of connective tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001514 ! bone relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001638 name: statoacoustic (VIII) nucleus namespace: zebrafish_anatomy synonym: "cochlear nucleus" RELATED [] synonym: "vestibulocochlear nucleus" RELATED [] xref: ZFIN:ZDB-ANAT-080417-117 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000029 ! hindbrain relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001639 name: endothelium namespace: zebrafish_anatomy def: "Simple squamous epithelium which lines blood and lymphatic vessels and the heart." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-118 is_a: ZFA:0001498 ! simple squamous epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001640 name: cephalic flexure namespace: zebrafish_anatomy def: "Ventral bend in the brain occuring caudal to the adenohypophyseal placode." [ZFIN:curator] synonym: "ventral flexure" RELATED [] xref: ZFIN:ZDB-ANAT-080417-119 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0001641 name: rudimentary neural arch namespace: zebrafish_anatomy def: "Neural arch on the urostyle. It does not support a neural spine. Sanger and McCune 2002." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-120 is_a: ZFA:0001066 ! neural arch relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000158 ! urostyle relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001642 name: tooth row namespace: zebrafish_anatomy def: "Anatomical cluster consisting of adjacent teeth constituting a row." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-121 is_a: ZFA:0001478 ! anatomical cluster relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001643 name: anatomical space namespace: zebrafish_anatomy def: "Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures." [ZFIN:curator] xref: CARO:0000005 xref: ZFIN:ZDB-ANAT-080417-122 is_a: ZFA:0100000 ! zebrafish anatomical entity relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0001644 name: articular cartilage namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-080417-123 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001645 name: angular bone namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-080417-124 is_a: ZFA:0001590 ! dermal bone relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001646 name: anal fin radial namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-080417-125 is_a: ZFA:0000271 ! radial relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0001647 name: dorsal fin radial namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-080417-126 is_a: ZFA:0000271 ! radial relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005000 name: basal communicating artery namespace: zebrafish_anatomy synonym: "BCA" RELATED [] xref: ZFIN:ZDB-ANAT-050915-120 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001267 ! cranial vasculature relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0005001 name: posterior communicating artery namespace: zebrafish_anatomy def: "An artery that connects caudal division of the internal carotid artery and the basal communicating artery to the basilar artery. Isogai et al. 2001." [ZFIN:curator] synonym: "caudal communicating segment" RELATED [] synonym: "PCA" RELATED [] synonym: "PCS" RELATED [] synonym: "posterior communicating segment of the basilar artery" RELATED [] xref: ZFIN:ZDB-ANAT-050915-121 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0005002 name: basilar artery namespace: zebrafish_anatomy synonym: "BA" RELATED [] xref: ZFIN:ZDB-ANAT-050915-122 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001267 ! cranial vasculature relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005003 name: pharyngeal vasculature namespace: zebrafish_anatomy synonym: "branchial basket" RELATED [] synonym: "branchial vasculature" RELATED [] xref: ZFIN:ZDB-ANAT-050915-123 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001267 ! cranial vasculature relationship: part_of ZFA:0001306 ! pharyngeal arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005004 name: aortic arch namespace: zebrafish_anatomy synonym: "aortic arches" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-050915-124 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005005 name: aortic arch 1 namespace: zebrafish_anatomy synonym: "AA1" RELATED [] synonym: "mandibular aortic arch" RELATED [] xref: ZFIN:ZDB-ANAT-050915-125 is_a: ZFA:0005004 ! aortic arch relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005006 name: aortic arch 2 namespace: zebrafish_anatomy synonym: "AA2" RELATED [] synonym: "hyoid aortic arch" RELATED [] xref: ZFIN:ZDB-ANAT-050915-126 is_a: ZFA:0005004 ! aortic arch relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005007 name: aortic arch 3 namespace: zebrafish_anatomy def: "Aortic arches 3 and 4 are not remodeled but are retained largely intact as the branchial arteries providing circulation through the gills. These arches are direct branches from the ventral aorta to the lateral dorsal aorta. Isogai et al. 2001." [ZFIN:curator] synonym: "AA3" RELATED [] xref: ZFIN:ZDB-ANAT-050915-127 is_a: ZFA:0005004 ! aortic arch relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005008 name: aortic arch 4 namespace: zebrafish_anatomy def: "Aortic arches 3 and 4 are not remodeled but are retained largely intact as the branchial arteries providing circulation through the gills. These arches are direct branches from the ventral aorta to the lateral dorsal aorta. Isogai et al. 2001." [ZFIN:curator] synonym: "AA4" RELATED [] xref: ZFIN:ZDB-ANAT-050915-128 is_a: ZFA:0005004 ! aortic arch relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005009 name: aortic arch 5 namespace: zebrafish_anatomy def: "The fifth and sixth arches, which come on-line at approximately 2.5 dpf, have a common trunk from the ventral aorta and drain to the midline dorsal aorta via an independent route. The fifth and sixth aortic arches supply the trunk and tail with oxygenated blood.Isogai et al. 2001." [ZFIN:curator] synonym: "AA5" RELATED [] xref: ZFIN:ZDB-ANAT-050915-129 is_a: ZFA:0005004 ! aortic arch relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005010 name: mid cerebral vein namespace: zebrafish_anatomy def: "The mesencephalic veins (MsV) enter the mid cerebral veins (MCeV) at the dorsal midline. THe MCeVs originate at the dorsal midline, proceede lateraly in a ventral direction to drain into the paired primordial midbrain channels (PHBC). Isogai et al. 2001., Kimmel et al. 1993" [ZFIN:curator] synonym: "MCeV" RELATED [] synonym: "mid-cerebral vein" RELATED [] synonym: "middle cerebral vein" RELATED [] xref: ZFIN:ZDB-ANAT-050915-82 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001267 ! cranial vasculature relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005011 name: pseudobranchial artery namespace: zebrafish_anatomy def: "A vascular loop attached to the efferent part of the mandibular arch that forms at 3.5 dpf. Isogai et al. 2001." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-050915-130 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0005012 name: afferent filamental artery namespace: zebrafish_anatomy synonym: "AFA" RELATED [] synonym: "afferent filamental arteries" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-050915-131 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000666 ! filamental artery relationship: part_of ZFA:0000716 ! afferent branchial artery relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005013 name: concurrent branch afferent branchial artery namespace: zebrafish_anatomy def: "The branch of the afferent branchial artery that continues posteriodorsally. Isogai et al. 2001." [ZFIN:curator] synonym: "CCB" RELATED [] xref: ZFIN:ZDB-ANAT-050915-132 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000716 ! afferent branchial artery relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005014 name: recurrent branch afferent branchial artery namespace: zebrafish_anatomy def: "The anterioventral proceeding branch of the afferent branchial artery. Isogai et al. 2001." [ZFIN:curator] synonym: "RCB" RELATED [] synonym: "recurrent branch afferent branchial arteries" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-050915-133 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000716 ! afferent branchial artery relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005015 name: afferent lamellar arteriole namespace: zebrafish_anatomy synonym: "afferent lamellar arterioles" RELATED PLURAL [] synonym: "AFL" RELATED [] xref: ZFIN:ZDB-ANAT-050915-134 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000211 ! gill lamella relationship: part_of ZFA:0005012 ! afferent filamental artery relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005016 name: aortic arch 6 namespace: zebrafish_anatomy def: "The fifth and sixth arches, which come on-line at approximately 2.5 dpf, have a common trunk from the ventral aorta and drain to the midline dorsal aorta via an independent route. The fifth and sixth aortic arches supply the trunk and tail with oxygenated blood. Isogai et al. 2001." [ZFIN:curator] synonym: "AA6" RELATED [] xref: ZFIN:ZDB-ANAT-050915-135 is_a: ZFA:0005004 ! aortic arch relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005017 name: primordial midbrain channel namespace: zebrafish_anatomy def: "The vessel between the anterior cerebral vein and the mid cerebral vein. Isogai et al. 2001." [ZFIN:curator] synonym: "PMBC" RELATED [] xref: ZFIN:ZDB-ANAT-050915-83 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001267 ! cranial vasculature relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005018 name: efferent filamental artery namespace: zebrafish_anatomy synonym: "EFA" RELATED [] xref: ZFIN:ZDB-ANAT-050915-136 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000202 ! efferent branchial artery relationship: part_of ZFA:0000666 ! filamental artery relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005019 name: efferent lamellar arteriole namespace: zebrafish_anatomy synonym: "efferent lamellar arterioles" RELATED PLURAL [] synonym: "ELA" RELATED [] xref: ZFIN:ZDB-ANAT-050915-137 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000211 ! gill lamella relationship: part_of ZFA:0005018 ! efferent filamental artery relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005020 name: central artery namespace: zebrafish_anatomy def: "Arteries that irrigate the forebrain and midbrain Isogai et al. 2001." [ZFIN:curator] synonym: "CtA" RELATED [] xref: ZFIN:ZDB-ANAT-050915-138 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000099 ! brain vasculature relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005021 name: cerebellar central artery namespace: zebrafish_anatomy def: "Extend upward from the PCS, branch to provide an arterial feed to the hindbrain, then drain back down into the PHBC Isogai et al. 2001." [ZFIN:curator] synonym: "CCtA" RELATED [] xref: ZFIN:ZDB-ANAT-050915-139 is_a: ZFA:0005020 ! central artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0005022 name: opercular artery namespace: zebrafish_anatomy def: "The opercular artery arises from the hyoid stump on the first aortic arch, then follows the lateral margin of the operculum (gill covering) ventrally to reconnect into the proximal part of the first aortic arch. Isogai et al. 2001." [ZFIN:curator] synonym: "external carotid artery" RELATED [] synonym: "ORA" RELATED [] xref: ZFIN:ZDB-ANAT-050915-140 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005006 ! aortic arch 2 relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005023 name: hematopoietic system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-051116-11 is_a: ZFA:0001439 ! anatomical system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0005024 name: trunk vasculature namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-050915-84 is_a: ZFA:0001079 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0005025 name: dorsal longitudinal anastomotic vessel namespace: zebrafish_anatomy def: "Trunk vessel that connects to the primitive hindbrain channel and the basilar artery at the caudal end of the medulla oblongata. Isogai et al. 2001." [ZFIN:curator] synonym: "DLAV" RELATED [] xref: ZFIN:ZDB-ANAT-050915-85 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! tail vasculature relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005026 name: primary head sinus namespace: zebrafish_anatomy def: "Main route for venous drainage of the anterior and mid cerebral veins as well as portions of the primordial hindbrain channel. Isogai et al. 2001." [ZFIN:curator] synonym: "lateral head vein" RELATED [] synonym: "PHS" RELATED [] xref: ZFIN:ZDB-ANAT-050915-86 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001267 ! cranial vasculature relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005027 name: posterior cerebral vein namespace: zebrafish_anatomy def: "Vein that drains the dorsal longitudinal vessel and the caudal portions of the venous capillary network of the medulla oblongata. Isogai et al. 2001." [ZFIN:curator] synonym: "caudal cerebral vein" RELATED [] synonym: "PCeV" RELATED [] xref: ZFIN:ZDB-ANAT-050915-87 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001267 ! cranial vasculature relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005028 name: ventral wall of dorsal aorta namespace: zebrafish_anatomy def: "Region where blood progenitor markers are expressed. Probable site of definitive hematopoiesis between 36hpf and 4dpf." [ZFIN:curator] synonym: "AGM" RELATED [] synonym: "aorta gonad mesonephros region" RELATED [] xref: ZFIN:ZDB-ANAT-051116-12 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000014 ! dorsal aorta relationship: part_of ZFA:0005023 ! hematopoietic system relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0005029 name: rostral blood island namespace: zebrafish_anatomy def: "Hematopoietic tissue derived from the cephalic mesoderm. Predominantly produces myeloid cells. de Jong and Zon 2005." [ZFIN:curator] synonym: "RBI" RELATED [] xref: ZFIN:ZDB-ANAT-051116-13 relationship: develops_from ZFA:0005041 ! anterior lateral plate mesoderm relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005023 ! hematopoietic system relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0005030 name: dorsal ciliary vein namespace: zebrafish_anatomy synonym: "DCV" RELATED [] xref: ZFIN:ZDB-ANAT-051116-14 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005082 ! dorsal branch nasal ciliary artery relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001267 ! cranial vasculature relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005031 name: dorsal longitudinal vein namespace: zebrafish_anatomy def: "Vessel that connects to the primitive hindbrain channel and the basilar artery at the caudal end of the medulla oblongata. Isogai et al. 2001." [ZFIN:curator] synonym: "DLV" RELATED [] xref: ZFIN:ZDB-ANAT-051116-15 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000099 ! brain vasculature relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005032 name: optic vein namespace: zebrafish_anatomy def: "Vein that connects to the hyaloid vein that drains the eye. External to eye. Isogai et al. 2001." [ZFIN:curator] synonym: "OV" RELATED [] xref: ZFIN:ZDB-ANAT-051116-16 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0007057 ! ocular vasculature relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0005033 name: vertebral artery namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-051116-17 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0005034 name: parachordal vessel namespace: zebrafish_anatomy def: "Vessels run longitudinally along the horizontal myoseptum. These vessels are not functional until after lumenization which occurs near 4 dpf. Isogai et al. 2003." [ZFIN:curator] synonym: "PAV" RELATED [] xref: ZFIN:ZDB-ANAT-051116-18 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0000477 ! posterior cardinal vein relationship: develops_from ZFA:0001057 ! intersegmental vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! tail vasculature relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0005035 name: subintestinal vein namespace: zebrafish_anatomy synonym: "SIV" RELATED [] xref: ZFIN:ZDB-ANAT-051116-19 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005036 name: supraintestinal artery namespace: zebrafish_anatomy def: "A continuation of the anterior mesenteric artery, which branches out from the dorsal aorta just caudal to the pronephric glomus. Isogai et al. 2001." [ZFIN:curator] synonym: "SIA" RELATED [] xref: ZFIN:ZDB-ANAT-051116-20 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0005037 name: tail vasculature namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-051116-21 is_a: ZFA:0001079 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005038 name: supraintestinal vein namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-051116-22 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005039 name: anterior lateral mesoderm namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-051116-23 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001065 ! lateral mesoderm relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0005040 name: posterior lateral mesoderm namespace: zebrafish_anatomy synonym: "PLM" RELATED [] xref: ZFIN:ZDB-ANAT-051116-24 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001065 ! lateral mesoderm relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0005041 name: anterior lateral plate mesoderm namespace: zebrafish_anatomy synonym: "ALPM" RELATED [] xref: ZFIN:ZDB-ANAT-051116-25 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000121 ! lateral plate mesoderm relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0005042 name: posterior lateral plate mesoderm namespace: zebrafish_anatomy synonym: "PLPM" RELATED [] xref: ZFIN:ZDB-ANAT-051116-26 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000121 ! lateral plate mesoderm relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0005043 name: nevi namespace: zebrafish_anatomy def: "An ectopic melanophore accumulation analogous to a nevi (mole) in humans." [ZFIN:curator] synonym: "f-nevi" RELATED [] xref: ZFIN:ZDB-ANAT-051116-27 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001119 ! dermis relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005044 name: optic artery namespace: zebrafish_anatomy def: "The artery that carries blood to the eye. It branches from the internal carotid artery and enters the eye ventrally through the optic fissure. Isogai et al. 2001." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-051116-28 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0007057 ! ocular vasculature relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005045 name: hyaloid artery namespace: zebrafish_anatomy def: "Artery that is internal to the eye. Isogai et al. 2001." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-051116-29 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005046 ! hyaloid vessel relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005046 name: hyaloid vessel namespace: zebrafish_anatomy synonym: "hyaloid vasculature" RELATED [] synonym: "hyaloid vessels" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-051116-30 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0007057 ! ocular vasculature relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005047 name: hyaloid vein namespace: zebrafish_anatomy def: "Vein internal to the eye. Isogai et al. 2001." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-051116-31 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005046 ! hyaloid vessel relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0005048 name: primitive prosencephalic artery namespace: zebrafish_anatomy def: "Vessel that branches from cranial division of the internal carotid artery, extending laterally around the rostral end of the head. Isogai et al. 2001." [ZFIN:curator] synonym: "PPrA" RELATED [] xref: ZFIN:ZDB-ANAT-051116-32 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0005049 name: prosencephalic artery namespace: zebrafish_anatomy def: "After the primitive prosencephalic artery forms it becomes disconnected from the cranial division of the internal carotid artery and instead it connects to the anterior mesencephalic central artery and the communicating vessels of the palatocerebral artery." [ZFIN:curator] synonym: "PrA" RELATED [] xref: ZFIN:ZDB-ANAT-051116-33 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005048 ! primitive prosencephalic artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005050 name: palatocerebral artery namespace: zebrafish_anatomy def: "The PLA branches ventrally from the CrDI. It extends rostrally along the base of mid- and forebrain, then loops medially and links to the corresponding vessel from the other side of the embryo. Isogai et al. 2001." [ZFIN:curator] synonym: "PLA" RELATED [] xref: ZFIN:ZDB-ANAT-051116-34 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005051 name: communicating vessel palatocerebral artery namespace: zebrafish_anatomy def: "Connect the palatocerebral artery with the prosencephalic atery. Isogai et al. 2001." [ZFIN:curator] synonym: "CMV" RELATED [] synonym: "communicating vessels" RELATED [] xref: ZFIN:ZDB-ANAT-051116-35 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005052 name: anterior mesencephalic central artery namespace: zebrafish_anatomy def: "Arteries that irrigate rostral regions of the midbrain. They extend between the Basial communicating artery to the anterior cerebral vein. Isogai et al. 2001." [ZFIN:curator] synonym: "AMCtA" RELATED [] synonym: "rostral mesencephalic central artery" RELATED [] xref: ZFIN:ZDB-ANAT-051116-36 is_a: ZFA:0005020 ! central artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005053 name: nasal ciliary artery namespace: zebrafish_anatomy synonym: "NCA" RELATED [] xref: ZFIN:ZDB-ANAT-051116-37 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0005054 name: inner optic circle namespace: zebrafish_anatomy synonym: "IOC" RELATED [] xref: ZFIN:ZDB-ANAT-051116-38 relationship: develops_from ZFA:0005082 ! dorsal branch nasal ciliary artery relationship: develops_from ZFA:0005083 ! ventral branch nasal ciliary artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0007057 ! ocular vasculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005055 name: median palatocerebral vein namespace: zebrafish_anatomy def: "Drains the PLA loop proceeds straight caudally along the cranial midline just above the pharynx, just below the diencephalon. Forms a 'T' with the palatocerebral veins.Isogai et al. 2001." [ZFIN:curator] synonym: "MPLV" RELATED [] xref: ZFIN:ZDB-ANAT-051116-39 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001267 ! cranial vasculature relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005056 name: palatocerebral vein namespace: zebrafish_anatomy def: "Vein that drains the median palatocerebral vein into the optic vein. Isogai et al. 2001." [ZFIN:curator] synonym: "PLV" RELATED [] xref: ZFIN:ZDB-ANAT-051116-40 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001267 ! cranial vasculature relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005057 name: epicardium namespace: zebrafish_anatomy def: "External layer of the heart." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060131-63 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005058 name: ventricular epicardium namespace: zebrafish_anatomy def: "The external layer of the ventricle bounding the ventricular myocardium. It is formed by a single layer of mesothelial cells supported by a basal lamina, and imbricated with collagen, fibroblasts, and vascular structures in the subepicardial space. Hu et al. 2001.." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060131-64 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0005057 ! epicardium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005059 name: trabecular layer namespace: zebrafish_anatomy def: "The layer of the myocardium composed of projections of contractile myocytes. The trabecular layer is bounded internally by the the endocardium. Unlike the trabeculations of higher vertebrates, both atrial and ventricular trabeculae of the zebrafish have more strut-like character, and are more uniform without apparent regional differences Hu et al. 2001.." [ZFIN:curator] synonym: "trabeculae" RELATED [] xref: ZFIN:ZDB-ANAT-060131-65 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001319 ! myocardium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005060 name: trabecular layer of ventricle namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060131-66 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005059 ! trabecular layer relationship: part_of ZFA:0005061 ! ventricular myocardium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005061 name: ventricular myocardium namespace: zebrafish_anatomy def: "Muscular layer of the cardiac ventricle composed of a compact myocardial layer surrounding the trabecular layer Hu et al. 2001.." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060131-67 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0001319 ! myocardium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005062 name: compact layer of ventricle namespace: zebrafish_anatomy def: "The outer layer the ventricular myocardium, muscle fibers are arranged in a compact form and involved the entire ventricle." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060131-68 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005061 ! ventricular myocardium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005063 name: cardiac conduction system namespace: zebrafish_anatomy synonym: "central conduction system" RELATED [] xref: ZFIN:ZDB-ANAT-060331-61 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005064 name: atrioventricular valve namespace: zebrafish_anatomy def: "The atrioventricular valve has four distinct leaflets oriented anterior, posterior, left, and right of the atrioventricular orifice. Hu et al. 2001." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060131-69 is_a: ZFA:0005065 ! heart valve relationship: develops_from ZFA:0001317 ! endocardial cushion relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0000471 ! atrium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005065 name: heart valve namespace: zebrafish_anatomy synonym: "heart valves" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-060131-70 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000114 ! heart relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0005066 name: bulbus arteriosus outer layer namespace: zebrafish_anatomy def: "Composed of scattered layers of interrupted elastic lamina. Hu et al. 2001.." [ZFIN:curator] synonym: "bulbus arteriosus externa" RELATED [] xref: ZFIN:ZDB-ANAT-060131-71 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000173 ! bulbus arteriosus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005067 name: bulbus arteriosus middle layer namespace: zebrafish_anatomy def: "Composed of 7-10 layers of helically arranged smooth muscle cells surrounded by a fine network of collagen, reticular, and elastic fibrils. Hu et al. 2001.." [ZFIN:curator] synonym: "bulbus arteriosus media" RELATED [] xref: ZFIN:ZDB-ANAT-060131-72 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000173 ! bulbus arteriosus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005068 name: bulbus arteriosus inner layer namespace: zebrafish_anatomy def: "Composed of subendothelium with longitudinally oriented collagen, reticular fibrils, elastic fibers, and smooth muscle cells bound by a thin endothelial layer. Hu et al. 2001.." [ZFIN:curator] synonym: "bulbus arteriosus intima" RELATED [] xref: ZFIN:ZDB-ANAT-060131-73 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000173 ! bulbus arteriosus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005069 name: sinoatrial node namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060331-62 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005063 ! cardiac conduction system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005070 name: atrioventricular node namespace: zebrafish_anatomy synonym: "AV node" RELATED [] xref: ZFIN:ZDB-ANAT-060331-63 relationship: develops_from ZFA:0005073 ! atrioventricular ring relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0000471 ! atrium relationship: part_of ZFA:0005063 ! cardiac conduction system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005071 name: distal conduction system namespace: zebrafish_anatomy synonym: "His-Purkinje system" RELATED [] synonym: "His-Purkinji network" RELATED [] synonym: "HPS" RELATED [] xref: ZFIN:ZDB-ANAT-060331-64 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0005063 ! cardiac conduction system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005072 name: endocardial ring namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060331-65 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000035 ! Larval:Protruding-mouth relationship: part_of ZFA:0001616 ! atrioventricular canal endocardium relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0005073 name: atrioventricular ring namespace: zebrafish_anatomy synonym: "AV ring" RELATED [] xref: ZFIN:ZDB-ANAT-060331-66 is_a: ZFA:0005072 ! endocardial ring relationship: end ZFS:0000034 ! Hatching:Pec-fin relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0000471 ! atrium relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0005074 name: central cardiac conduction system namespace: zebrafish_anatomy def: "Cardiac conduction system, characterized by slow impulse propagation and prolonged refractory periods." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-67 is_a: ZFA:0005063 ! cardiac conduction system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005075 name: peripheral cardiac conduction system namespace: zebrafish_anatomy def: "Portion of the cardiac conduction system, with rapid impulse propagation." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060331-68 is_a: ZFA:0005063 ! cardiac conduction system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005076 name: primordial vasculature namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-33 is_a: ZFA:0000010 ! cardiovascular system relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0005077 name: vascular cord namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-34 is_a: ZFA:0005076 ! primordial vasculature relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0005078 name: middle mesencephalic central artery namespace: zebrafish_anatomy def: "Project rostrally and dorsally from the AMCtA to to irrigate the midportion of the midbrain Isogai et al. 2001." [ZFIN:curator] synonym: "MMCtA" RELATED [] xref: ZFIN:ZDB-ANAT-060816-35 is_a: ZFA:0005020 ! central artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005079 name: posterior mesencephalic central artery namespace: zebrafish_anatomy def: "Project dorsally from BCA to irrigate the caudal part of midbrain Isogai et al. 2001." [ZFIN:curator] synonym: "caudal mesencephalic central artery" RELATED [] synonym: "PMCtA" RELATED [] xref: ZFIN:ZDB-ANAT-060816-36 is_a: ZFA:0005020 ! central artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005080 name: anterior mesenteric artery namespace: zebrafish_anatomy def: "An artery deep in the trunk that connects the dorsal aorta to the supraintestinal artery. Isogai et al. 2001." [ZFIN:curator] synonym: "AMA" RELATED [] synonym: "rostral mesenteric artery" RELATED [] xref: ZFIN:ZDB-ANAT-060816-37 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005081 name: internal carotid artery namespace: zebrafish_anatomy synonym: "ICA" RELATED [] xref: ZFIN:ZDB-ANAT-060816-38 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0001053 ! primitive internal carotid artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000097 ! carotid artery relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005082 name: dorsal branch nasal ciliary artery namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-39 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005053 ! nasal ciliary artery relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005083 name: ventral branch nasal ciliary artery namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-40 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005053 ! nasal ciliary artery relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005084 name: metencephalic artery namespace: zebrafish_anatomy def: "These arteies branch dorsally from both sides of the posterior communicating artery looping up to join with the opposite MtA as well as with both middle cerebral veins at the dorsal midline of the head. Isogai et al. 2001." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060816-41 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0005085 name: nasal artery namespace: zebrafish_anatomy def: "The nasal arteries start at the internal carotid artey and travel rostrally, passing along the right and left walls of the nasal sac at the most rostral end of the head. From the nasal sac, the NA flows into the nasal veins. Isogai et al. 2001." [ZFIN:curator] synonym: "NA" RELATED [] xref: ZFIN:ZDB-ANAT-060816-42 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0005086 name: pectoral artery namespace: zebrafish_anatomy def: "The pectoral (subclavian) arteries originate from the dorsal aorta and takes the blood outward into the fin from the paired portion of the dorsal aorta posterior to the last aortic arch. Kimmel et al. 1993" [ZFIN:curator] synonym: "PA" RELATED [] synonym: "subclavian artery" RELATED [] xref: ZFIN:ZDB-ANAT-060816-43 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005096 ! pectoral fin vasculature relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005087 name: pectoral vein namespace: zebrafish_anatomy synonym: "PV" RELATED [] xref: ZFIN:ZDB-ANAT-060816-44 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005096 ! pectoral fin vasculature relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005088 name: posterior mesenteric artery namespace: zebrafish_anatomy def: "Branch ventrally from the dorsal aorta and anastomose longitudinally along the dorsal wall of the hindgut, forming the caudal part of the supraintestinal artery. Isogai et al. 2001." [ZFIN:curator] synonym: "caudal mesenteric artery" RELATED [] synonym: "PMA" RELATED [] xref: ZFIN:ZDB-ANAT-060816-45 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005089 name: swim bladder artery namespace: zebrafish_anatomy def: "An elaborate set of vessels that branche off caudally from the anterior mesenteric artery just after the dorsal aorta. The SBA vascular loops are located on the ventral side of the swim bladder. Isogai et al. 2001." [ZFIN:curator] synonym: "SBA" RELATED [] xref: ZFIN:ZDB-ANAT-060816-46 is_a: ZFA:0000005 ! artery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005090 name: hepatic portal vein namespace: zebrafish_anatomy synonym: "HPV" RELATED [] synonym: "primary hepatic portal veins" RELATED [] xref: ZFIN:ZDB-ANAT-060816-47 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0005091 name: hepatic sinusoid namespace: zebrafish_anatomy def: "Wide thin-walled blood vessels in the liver. In mammals they have neither veinous or arterial markers." [ZFIN:curator] synonym: "hepatic sinusoids" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-060816-48 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005024 ! trunk vasculature relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005092 name: mesencephalic vein namespace: zebrafish_anatomy synonym: "MsV" RELATED [] xref: ZFIN:ZDB-ANAT-060816-49 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005093 name: nasal vein namespace: zebrafish_anatomy synonym: "NV" RELATED [] xref: ZFIN:ZDB-ANAT-060816-50 is_a: ZFA:0000082 ! vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001267 ! cranial vasculature relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0005094 name: choroidal vascular plexus namespace: zebrafish_anatomy def: "Develops adjacent to the pigment epithelium of the eye. The choroidal plexus develops from the primitive mesencephalic artery. Initially blood enters from the mesencephalic central artery, and the dorsal ciliary vein. The plexus drains via the ophthalmic vein. Isogai et al. 2001." [ZFIN:curator] synonym: "CVP" RELATED [] xref: ZFIN:ZDB-ANAT-060816-51 is_a: ZFA:0001267 ! cranial vasculature relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000036 ! Larval:Day 4 [Term] id: ZFA:0005095 name: fin vasculature namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-52 is_a: ZFA:0001079 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005096 name: pectoral fin vasculature namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-53 is_a: ZFA:0005095 ! fin vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005097 name: caudal fin vasculature namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-54 is_a: ZFA:0005095 ! fin vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005098 name: central ray artery namespace: zebrafish_anatomy def: "Positioned in the intraray mesenchym between the hemirays of the lepidotrichia,. Huang et al. 2003." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060816-55 is_a: ZFA:0005095 ! fin vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005099 name: ray vein namespace: zebrafish_anatomy def: "Lie flanking and just lateral to the fin ray, in the interray mesenchyme. Huang et al. 2003." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060816-56 is_a: ZFA:0005095 ! fin vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005100 name: intervessel commissure namespace: zebrafish_anatomy def: "Vessels that travel between artery and veins or vein and vein in a single ray." [ZFIN:curator] synonym: "intervessel comisures" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-060816-57 is_a: ZFA:0005095 ! fin vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005101 name: interray vessel namespace: zebrafish_anatomy def: "Vessels that travel between veins in adjacent rays." [ZFIN:curator] synonym: "interray vessels" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-060816-58 is_a: ZFA:0005095 ! fin vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005102 name: presumptive median fin fold namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-59 is_a: ZFA:0001116 ! presumptive structure relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0005103 name: presumptive ventral fin fold namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-60 is_a: ZFA:0005102 ! presumptive median fin fold relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0005104 name: presumptive dorsal fin fold namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-61 is_a: ZFA:0005102 ! presumptive median fin fold relationship: end ZFS:0000028 ! Segmentation:26+ somites relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0005105 name: lymph vessel namespace: zebrafish_anatomy def: "A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-060816-62 is_a: ZFA:0001079 ! vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0005106 name: longitudinal lateral lymphatic vessel namespace: zebrafish_anatomy synonym: "LLL" RELATED [] xref: ZFIN:ZDB-ANAT-060816-63 is_a: ZFA:0005105 ! lymph vessel relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005107 name: pectoral lymphatic vessel namespace: zebrafish_anatomy synonym: "PL" RELATED [] xref: ZFIN:ZDB-ANAT-060816-64 is_a: ZFA:0005105 ! lymph vessel relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005108 name: facial lymphatic vessel namespace: zebrafish_anatomy synonym: "FL" RELATED [] xref: ZFIN:ZDB-ANAT-060816-65 is_a: ZFA:0005105 ! lymph vessel relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005109 name: jugular lymphatic vessel namespace: zebrafish_anatomy synonym: "JL" RELATED [] xref: ZFIN:ZDB-ANAT-060816-66 is_a: ZFA:0005105 ! lymph vessel relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005110 name: thoracic duct namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-060816-67 is_a: ZFA:0005105 ! lymph vessel relationship: develops_from ZFA:0000477 ! posterior cardinal vein relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001073 ! axial vasculature relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0005111 name: medial forebrain bundle namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061101-29 is_a: ZFA:0000145 ! CNS tracts and commissures relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005112 name: dorsal lateral line namespace: zebrafish_anatomy def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061211-16 is_a: ZFA:0001469 ! lateral line relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001471 ! posterior lateral line system relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005113 name: dorsal lateral line neuromast namespace: zebrafish_anatomy def: "Neuromast that is part of the dorsal lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator] synonym: "neuromast dorsal" RELATED [] xref: ZFIN:ZDB-ANAT-061211-17 is_a: ZFA:0000243 ! neuromast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005112 ! dorsal lateral line relationship: start ZFS:0000034 ! Hatching:Pec-fin [Term] id: ZFA:0005114 name: middle lateral line system namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061211-18 is_a: ZFA:0000034 ! lateral line system relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005115 name: primary posterior lateral line primordium namespace: zebrafish_anatomy def: "Primordium that forms the first neuromasts of the posterior lateral line. This primordium travels at 1.5-1.7 somites/hour and deposits neuromast that are polarized along the antero-posterior axis." [ZFIN:curator] synonym: "primary posterior lateral line primordia" RELATED PLURAL [] synonym: "primI" RELATED [] xref: ZFIN:ZDB-ANAT-061211-19 is_a: ZFA:0001157 ! posterior lateral line primordium relationship: develops_from ZFA:0001156 ! posterior lateral line placode relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0005116 name: secondary posterior lateral line primordium namespace: zebrafish_anatomy def: "Second lateral line primordium. These primordia move at 0.2 somites/hour and deposit neuromasts that are polarized in a dorso-ventral direction." [ZFIN:curator] synonym: "secondary posterior lateral line primordia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-061211-20 is_a: ZFA:0001157 ! posterior lateral line primordium relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0005117 name: anterior lateral line primordium namespace: zebrafish_anatomy def: "A migrating group of cells originating from an anterior lateral line placode. The primordium deposits neuromasts and interneuromasts between them during its migration." [ZFIN:curator] synonym: "anterior lateral line primordia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-061211-21 is_a: ZFA:0000228 ! lateral line primordium relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0001468 ! anterior lateral line system relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0005118 name: middle lateral line primordium namespace: zebrafish_anatomy def: "A migrating group of cells originating from the middle lateral line placode. The primordium deposits neuromasts with interneuromasts between them." [ZFIN:curator] synonym: "middle lateral line primordia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-061211-22 is_a: ZFA:0000228 ! lateral line primordium relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0005114 ! middle lateral line system relationship: start ZFS:0000031 ! Pharyngula:Prim-25 [Term] id: ZFA:0005119 name: barbel primordium namespace: zebrafish_anatomy def: "A surface structure that will eventually grow to form a barbel. The primordium is rich in taste buds. The final location for taste buds present in the primordium is the distal tip of the mature barbel." [ZFIN:curator] synonym: "barbel primordia" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-070517-30 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: start ZFS:0000042 ! Juvenile:Days 30-44 [Term] id: ZFA:0005120 name: peritoneum namespace: zebrafish_anatomy def: "An epithelium that lines the peritoneal cavity." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-31 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005121 name: middle lateral line placode namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061211-23 is_a: ZFA:0001310 ! dorsolateral placode relationship: end ZFS:0000033 ! Hatching:Long-pec relationship: part_of ZFA:0005114 ! middle lateral line system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005122 name: dorsal axial hypoblast namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-061211-24 relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0001378 ! axial hypoblast relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0005123 name: gut epithelium namespace: zebrafish_anatomy def: "Epithelium lining the lumen of the gut." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061211-25 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000112 ! gut relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005124 name: intestinal epithelium namespace: zebrafish_anatomy def: "Simple columnar epithelium that lines the intestine, sometimes pseudostratified, with absorptive brush-border cells and mucous goblet cells clearly visible. Crosnier et al. 2005" [ZFIN:curator] synonym: "intestine epithelium" RELATED [] xref: ZFIN:ZDB-ANAT-061211-26 is_a: ZFA:0001496 ! simple columnar epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001338 ! intestine relationship: part_of ZFA:0005123 ! gut epithelium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005125 name: intestinal villus namespace: zebrafish_anatomy def: "The entire digestive tract is lined by well developed villi, which are longest in the intestinal bulb and decrease progressively in size towards the caudal end of the intestine. No crypts are present, but, the regions between the villi, the intervillus pockets, have a crypt-like function. Cells are produced in the intervillus pockets and shed from the villus tips.Crosnier et al. 2005" [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061211-27 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005124 ! intestinal epithelium relationship: start ZFS:0000037 ! Larval:Day 5 [Term] id: ZFA:0005126 name: intestinal bulb epithelium namespace: zebrafish_anatomy def: "Intestinal epithelium which lines the lumen of the intestinal bulb." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061211-28 is_a: ZFA:0005124 ! intestinal epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001076 ! intestinal bulb relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005127 name: mid intestine epithelium namespace: zebrafish_anatomy def: "Intestinal epithelium which lines the lumen of the mid intestine." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061211-29 is_a: ZFA:0005124 ! intestinal epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001323 ! mid intestine relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005128 name: posterior intestine epithelium namespace: zebrafish_anatomy def: "Intestinal epithelium which lines the lumen of the posterior intestine." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-061211-30 is_a: ZFA:0005124 ! intestinal epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000706 ! posterior intestine relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005129 name: mesentery namespace: zebrafish_anatomy def: "A double layer composed of peritoneum that attaches the visceral organs to the body wall." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-32 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005120 ! peritoneum relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005130 name: dorsal mesentery namespace: zebrafish_anatomy def: "The mesentery that originates from the dorsal side of the peritoneal cavity." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-33 is_a: ZFA:0005129 ! mesentery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005131 name: parietal peritoneum namespace: zebrafish_anatomy def: "The peritoneum that lines the walls of the peritoneal cavity." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-34 is_a: ZFA:0005120 ! peritoneum relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005132 name: visceral peritoneum namespace: zebrafish_anatomy def: "The peritoneum that covers the external surfaces of most abdominal organs." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-35 is_a: ZFA:0005120 ! peritoneum relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005133 name: ventral mesentery namespace: zebrafish_anatomy def: "The mesentery that originates from the ventral side of the peritoneal cavity." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-36 is_a: ZFA:0005129 ! mesentery relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005134 name: dental epithelium namespace: zebrafish_anatomy def: "Epithelium that is part of a developing tooth or dental organ." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-37 is_a: ZFA:0001486 ! epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005135 name: primary dental epithelium namespace: zebrafish_anatomy def: "Epithelium that surrounds a primary tooth. This epithelium is committed to formation of replacement teeth." [ZFIN:curator] synonym: "pharyngeal tooth epithelium" RELATED [] synonym: "tooth epithelium" RELATED [] xref: ZFIN:ZDB-ANAT-070517-38 is_a: ZFA:0005134 ! dental epithelium relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005136 name: inner dental epithelium namespace: zebrafish_anatomy def: "Inner layer of the dental organ, composed of ameloblasts." [ZFIN:curator] synonym: "inner enamel epithelium" RELATED [] xref: ZFIN:ZDB-ANAT-070517-39 is_a: ZFA:0005134 ! dental epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005138 ! dental organ relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005137 name: outer dental epithelium namespace: zebrafish_anatomy def: "Outer layer of the dental organ." [ZFIN:curator] synonym: "outer dental epithelium" RELATED [] xref: ZFIN:ZDB-ANAT-070517-40 is_a: ZFA:0005134 ! dental epithelium relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005138 ! dental organ relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005138 name: dental organ namespace: zebrafish_anatomy def: "A structure that is involved in tooth formation. A bell shape two layer epithelial structure that descends toward the ceratobranchial 5 bone, enclosing the dental mesenchyme. At later times in tooth development the cells at the apex of the bell may be involved in enameloid formation. This structure remains at the base of the erupted tooth and is the source of replacement teeth." [ZFIN:curator] synonym: "enamel organ" RELATED [] xref: ZFIN:ZDB-ANAT-070517-41 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001153 ! tooth placode relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005139 name: dental mesenchyme namespace: zebrafish_anatomy def: "Mesenchyme enclosed by dental organ." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-42 is_a: ZFA:0000113 ! head mesenchyme relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005138 ! dental organ relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005140 name: dental papilla namespace: zebrafish_anatomy def: "Tissue of the developing tooth. It is composed of pre-odontoblast and undiffentiated mesnchyme cells and connects to the basal lamina." [ZFIN:curator] synonym: "pharyngeal tooth mesenchyme" RELATED [] synonym: "tooth mesenchyme" RELATED [] xref: ZFIN:ZDB-ANAT-070517-43 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005139 ! dental mesenchyme relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005141 name: tooth pulp namespace: zebrafish_anatomy def: "Material in the center of the dentine of the mature tooth. In secondary teeth the pulp contains blood vessles and odontoblast." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-44 relationship: develops_from ZFA:0005140 ! dental papilla relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005142 name: enameloid namespace: zebrafish_anatomy def: "A dentine-like hypermineralized substance that covers the zebrafish tooth tip." [ZFIN:curator] synonym: "enamel" RELATED [] xref: ZFIN:ZDB-ANAT-070517-45 is_a: ZFA:0001487 ! portion of organism substance relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005143 name: dentine namespace: zebrafish_anatomy def: "Mineralized collagen containing substance that forms the tooth structure." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-46 is_a: ZFA:0001487 ! portion of organism substance relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005144 name: ampullary nerve namespace: zebrafish_anatomy def: "A branch of the 8th cranial nerve that innervates the cristae ampullaris." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070517-47 is_a: ZFA:0007009 ! nerve relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000247 ! cranial nerve VIII relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005145 name: muscle namespace: zebrafish_anatomy def: "Portion of tissue composed of contractile fibers." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-181 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005146 name: area postrema namespace: zebrafish_anatomy def: "An area of medulla oblongata, outside the blood-brain barrier. The apical terminals of the neurons are, in a strategic location either to monitor the chemical constitution of the plasma or to release neurogenic substances into the general circulation. Ma 1997." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-182 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005147 name: regenerating tissue namespace: zebrafish_anatomy def: "A portion of tissue that is regrowing after damage or amputation." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-183 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005148 name: apical epidermal cap namespace: zebrafish_anatomy def: "Part of the regeneration epithelium closest to the fin." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-184 is_a: ZFA:0005147 ! regenerating tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001389 ! regeneration epithelium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005149 name: distal epidermal cap namespace: zebrafish_anatomy def: "Part of regeneration epithelium at the tip of the fin." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-185 is_a: ZFA:0005147 ! regenerating tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001389 ! regeneration epithelium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0005150 name: basal regeneration epithelium namespace: zebrafish_anatomy def: "Layer of the wound epidermis that surrounds the blastema." [ZFIN:curator] synonym: "basal wound epidermis" RELATED [] xref: ZFIN:ZDB-ANAT-070928-186 is_a: ZFA:0005147 ! regenerating tissue relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001389 ! regeneration epithelium relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007000 name: macula saccule namespace: zebrafish_anatomy synonym: "saccular macula" RELATED [] xref: ZFIN:ZDB-ANAT-070517-48 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000428 ! saccule relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007001 name: dorso-rostral cluster namespace: zebrafish_anatomy def: "Early-forming telencephalic neural cluster. Neurons of the dorso-rostral cluster (drc) extend axons to form the supra-optic tract (SOT) and the anterior commissure (AC). Ross et al., 1992." [ZFIN:curator] synonym: "dorsorostral cluster" RELATED [] synonym: "drc" RELATED [] xref: ZFIN:ZDB-ANAT-060331-69 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000079 ! telencephalon relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0007002 name: ventro-rostral cluster namespace: zebrafish_anatomy def: "Early-forming neural cluster located in the rostral diencephalon. At 19 h, axons arising from the vrc grow caudally to pioneer the tract of the postoptic commissure (TPOC). Ross et al., 1992." [ZFIN:curator] synonym: "ventrorostral cluster" RELATED [] synonym: "vrc" RELATED [] xref: ZFIN:ZDB-ANAT-060331-70 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000101 ! diencephalon relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0007003 name: ventro-caudal cluster namespace: zebrafish_anatomy def: "Early-forming neural cluster of the ventral midbrain. At 16 h, axons of the vcc grow caudally to pioneer the medial longitudinal fasciculus (MLF), which is part of the larger ventral longitudinal tract (VLT). Later, neurons from this cluster project axons rostrally into the tract of the post-optic commissure (TPOC). Ross et al., 1992." [ZFIN:curator] synonym: "vcc" RELATED [] synonym: "ventrocaudal cluster" RELATED [] xref: ZFIN:ZDB-ANAT-060331-71 is_a: ZFA:0000128 ! midbrain relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0007004 name: epiphysial cluster namespace: zebrafish_anatomy def: "Early-developing neuronal cluster of the epiphysis. By 24 hpf the pioneer axon of the dorsoventral diencephalic tract (DVDT) has arisen from the ec and grown ventrally. As this axon encounters axons of the TPOC, it makes a near-90 rostral turn and grows rostrally among axons of the TPOC growing in the opposite direction. Ross et al., 1992." [ZFIN:curator] synonym: "ec" RELATED [] xref: ZFIN:ZDB-ANAT-060331-72 relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000019 ! epiphysis relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0007005 name: hemal prezygapophysis namespace: zebrafish_anatomy alt_id: ZFA:0001380 def: "Hemal prezygapophyses are paired, anteromedially directed processes arising from the bases of hemal arches, ligamentously joined to the hemal postzygapophyses of the preceding vertebra. Posterior caudal vertebrae close to the caudal fin lack hemal prezygopophyses." [ZFIN:curator] synonym: "haemal prezygapophysis" RELATED [] synonym: "hemal prezygopophysis" RELATED [] xref: ZFIN:ZDB-ANAT-070928-187 is_a: ZFA:0001591 ! endochondral bone relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000519 ! hemal arch relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007006 name: lip namespace: zebrafish_anatomy def: "One of the two fleshy folds which surround the opening of the mouth. http://www.medterms.com/script/main/art.asp?articlekey=9458" [ZFIN:curator] synonym: "lips" RELATED PLURAL [] xref: ZFIN:ZDB-ANAT-070928-188 is_a: ZFA:0000292 ! surface structure relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007007 name: pallium namespace: zebrafish_anatomy def: "The mantle of gray matter forming the cerebral cortex. http://www.thefreedictionary.com/pallium" [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-189 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000008 ! brain relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007008 name: ventral intermandibularis anterior namespace: zebrafish_anatomy def: "Is a mandibular muscle that attaches to Meckel's cartilage and functions during jaw closing. See ZDB-PUB-020703-2 and ZDB-PUB-061010-9." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-127 relationship: develops_from ZFA:0000369 ! intermandibularis relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007009 name: nerve namespace: zebrafish_anatomy def: "A portion of tissue which is a fasiculated group of axons." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-190 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007010 name: eminentia thalami namespace: zebrafish_anatomy def: "Part of the forebrain that is ventral to the ventral thalamus and dorsal to the preoptic area. See page 44 of the Atlas of Early Zebrafish Brain Development." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-191 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000109 ! forebrain relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007011 name: vagal root namespace: zebrafish_anatomy def: "Part of cranial nerve X." [ZFIN:curator] synonym: "rX" RELATED [] synonym: "vagus root" RELATED [] xref: ZFIN:ZDB-ANAT-070928-192 relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000453 ! cranial nerve X relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007012 name: lateral forebrain bundle namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-193 is_a: ZFA:0000145 ! CNS tracts and commissures relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000033 ! Hatching:Long-pec [Term] id: ZFA:0007013 name: preplacodal ectoderm namespace: zebrafish_anatomy def: "Non neural ectoderm that surrounds the presumptive neural plate and gives rise to neurogenic placodes." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-070928-194 is_a: ZFA:0001178 ! non neural ectoderm relationship: end ZFS:0000022 ! Gastrula:Bud relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0007014 name: anterior presumptive neural plate namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-195 relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate relationship: start ZFS:0000019 ! Gastrula:Shield [Term] id: ZFA:0007015 name: posterior presumptive neural plate namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-196 relationship: end ZFS:0000020 ! Gastrula:75%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate relationship: start ZFS:0000019 ! Gastrula:Shield [Term] id: ZFA:0007016 name: anterior neural plate namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-197 relationship: develops_from ZFA:0007014 ! anterior presumptive neural plate relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0000132 ! neural plate relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0007017 name: posterior neural plate namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-198 relationship: develops_from ZFA:0007015 ! posterior presumptive neural plate relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0007018 name: forebrain neural plate namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-199 relationship: develops_from ZFA:0000062 ! presumptive forebrain relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0007016 ! anterior neural plate relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0007019 name: midbrain neural plate namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-200 relationship: develops_from ZFA:0000148 ! presumptive midbrain relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0007016 ! anterior neural plate relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0007020 name: forebrain midbrain boundary neural plate namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-201 relationship: develops_from ZFA:0001368 ! presumptive forebrain midbrain boundary relationship: end ZFS:0000022 ! Gastrula:Bud relationship: part_of ZFA:0007016 ! anterior neural plate relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0007021 name: spinal cord neural plate namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-202 relationship: develops_from ZFA:0000417 ! presumptive spinal cord relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007017 ! posterior neural plate relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0007022 name: hindbrain neural plate namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-203 relationship: develops_from ZFA:0000569 ! presumptive hindbrain relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0007017 ! posterior neural plate relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0007023 name: posterior neural keel namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-204 relationship: develops_from ZFA:0007017 ! posterior neural plate relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007024 name: anterior neural keel namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-205 relationship: develops_from ZFA:0007016 ! anterior neural plate relationship: end ZFS:0000023 ! Segmentation:1-4 somites relationship: part_of ZFA:0000131 ! neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007025 name: midbrain neural keel namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-206 relationship: develops_from ZFA:0007019 ! midbrain neural plate relationship: end ZFS:0000023 ! Segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007026 name: forebrain neural keel namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-207 relationship: develops_from ZFA:0007018 ! forebrain neural plate relationship: end ZFS:0000023 ! Segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007027 name: forebrain midbrain boundary neural keel namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-208 relationship: develops_from ZFA:0007020 ! forebrain midbrain boundary neural plate relationship: end ZFS:0000023 ! Segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007028 name: spinal cord neural keel namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-209 relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007029 name: hindbrain neural keel namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-210 relationship: develops_from ZFA:0007022 ! hindbrain neural plate relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007030 name: posterior neural rod namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-211 relationship: develops_from ZFA:0007023 ! posterior neural keel relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0007031 name: anterior neural rod namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-212 relationship: develops_from ZFA:0007024 ! anterior neural keel relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0000133 ! neural rod relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0007032 name: midbrain neural rod namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-213 relationship: develops_from ZFA:0007025 ! midbrain neural keel relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0007033 name: forebrain midbrain boundary neural rod namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-214 relationship: develops_from ZFA:0007027 ! forebrain midbrain boundary neural keel relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0007034 name: forebrain neural rod namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-215 relationship: develops_from ZFA:0007026 ! forebrain neural keel relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0007035 name: spinal cord neural rod namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-216 relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: part_of ZFA:0007030 ! posterior neural rod relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0007036 name: hindbrain neural rod namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-217 relationship: develops_from ZFA:0007029 ! hindbrain neural keel relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: part_of ZFA:0007030 ! posterior neural rod relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0007037 name: posterior neural tube namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-218 relationship: develops_from ZFA:0007030 ! posterior neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001135 ! neural tube relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0007038 name: anterior neural tube namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-219 relationship: develops_from ZFA:0007031 ! anterior neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001135 ! neural tube relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0007039 name: midbrain neural tube namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-220 relationship: develops_from ZFA:0007032 ! midbrain neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0007040 name: forebrain midbrain boundary neural tube namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-221 relationship: develops_from ZFA:0007033 ! forebrain midbrain boundary neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0007041 name: forebrain neural tube namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-222 relationship: develops_from ZFA:0007034 ! forebrain neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0007042 name: spinal cord neural tube namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-223 relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0007037 ! posterior neural tube relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0007043 name: hindbrain neural tube namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-224 relationship: develops_from ZFA:0007036 ! hindbrain neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0007037 ! posterior neural tube relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0007044 name: midbrain hindbrain boundary neural plate namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-225 relationship: develops_from ZFA:0001187 ! presumptive midbrain hindbrain boundary relationship: end ZFS:0000024 ! Segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate relationship: start ZFS:0000021 ! Gastrula:90%-epiboly [Term] id: ZFA:0007045 name: midbrain hindbrain boundary neural keel namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-226 relationship: develops_from ZFA:0007044 ! midbrain hindbrain boundary neural plate relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007046 name: midbrain hindbrain boundary neural rod namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-227 relationship: develops_from ZFA:0007045 ! midbrain hindbrain boundary neural keel relationship: end ZFS:0000026 ! Segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0007047 name: midbrain hindbrain boundary neural tube namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-070928-228 relationship: develops_from ZFA:0007046 ! midbrain hindbrain boundary neural rod relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0001135 ! neural tube relationship: start ZFS:0000026 ! Segmentation:14-19 somites [Term] id: ZFA:0007048 name: ventral intermandibularis posterior namespace: zebrafish_anatomy def: "Is a mandibular muscle that attaches Meckel's cartilage to the basihyal cartilage and functions in jaw opening. See Hunter et al., 2002 and Lin et al., 2006." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-128 relationship: develops_from ZFA:0000369 ! intermandibularis relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007049 name: adductor mandibulae namespace: zebrafish_anatomy def: "Is a mandibular muscle that forms along the palatoquadrates and inserts on Meckel's cartilages and functions in jaw closing. See Hunter et al., 2002 and Hernandez et al., 2005." [ZFIN:curator] synonym: "dorsal adductor mandibulae" RELATED [] xref: ZFIN:ZDB-ANAT-080417-129 is_a: ZFA:0000236 ! mandibular muscle relationship: end ZFS:0000041 ! Larval:Days 21-29 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007050 name: constrictor dorsalis namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-080417-130 is_a: ZFA:0000236 ! mandibular muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007051 name: ventral interhyoideus namespace: zebrafish_anatomy def: "Is a hyoid muscle that has attachment sites on the basihyal and the posterior end of the ceratohyals and functions in jaw opening. See Hunter et al., 2002." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-131 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007052 name: hyohyoideus namespace: zebrafish_anatomy def: "Is a hyoid muscle that inserts at the most anterior basibranchial and also at the posterior ends of the ceratohyals and functions in jaw closure. See Hunter et al., 2002." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-132 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007053 name: dorsal adductor hyomandibulae namespace: zebrafish_anatomy def: "Is a hyoid muscle that attaches to the dorsomedial faces of the hyosymplectics. See Hunter et al., 2002." [ZFIN:curator] xref: ZFIN:ZDB-ANAT-080417-133 is_a: ZFA:0000521 ! hyoid muscle relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007054 name: pillar of the anterior semicircular canal namespace: zebrafish_anatomy def: "Tissue that divides the utricle from the anterior semicircular canal while the otic vessicle is maturing. The pillar form as pairs of protrusions from opposite sides of the otic vesicle meet and fuse to form a pillar of tissue spanning the lumen. The pillar eventually expands to become the hub of tissue around whose perimeter runs the anterior semicircular canal. Haddon et al., 1996" [ZFIN:curator] synonym: "anterior pillar" RELATED [] synonym: "anterior pillar of the semicircular canal" RELATED [] xref: ZFIN:ZDB-ANAT-080417-134 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000217 ! inner ear relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0007055 name: pillar of the lateral semicircular canal namespace: zebrafish_anatomy def: "Tissue that divides the utricle from the lateral semicircular canal while the otic vessicle is maturing. The pillar form as pairs of protrusions from opposite sides of the otic vesicle meet and fuse to form a pillar of tissue spanning the lumen. The pillar eventually expands to become the hub of tissue around whose perimeter runs the lateral semicircular canal. Haddon et al., 1996" [ZFIN:curator] synonym: "ventral pillar" RELATED [] synonym: "ventral piller of the semicircular canal" RELATED [] xref: ZFIN:ZDB-ANAT-080417-135 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000217 ! inner ear relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0007056 name: pillar of the posterior semicircular canal namespace: zebrafish_anatomy def: "Tissue that divides the utricle from the posterior semicircular canal while the otic vessicle is maturing. The pillar form as pairs of protrusions from opposite sides of the otic vesicle meet and fuse to form a pillar of tissue spanning the lumen. The pillar eventually expands to become the hub of tissue around whose perimeter runs the posterior semicircular canal. Haddon et al., 1996" [ZFIN:curator] synonym: "posterior pillar" RELATED [] synonym: "posterior pillar of the semicircular" RELATED [] xref: ZFIN:ZDB-ANAT-080417-136 is_a: ZFA:0001477 ! portion of tissue relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000217 ! inner ear relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0007057 name: ocular vasculature namespace: zebrafish_anatomy synonym: "eye vasculature" RELATED [] synonym: "optic vasculature" RELATED [] xref: ZFIN:ZDB-ANAT-080417-137 is_a: ZFA:0001267 ! cranial vasculature relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0007058 name: roof plate namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-080417-138 relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: part_of ZFA:0000012 ! central nervous system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0007059 name: neurogenic field namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-080417-139 relationship: develops_from ZFA:0007013 ! preplacodal ectoderm relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000022 ! Gastrula:Bud [Term] id: ZFA:0007060 name: dorsolateral field namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-080417-140 is_a: ZFA:0007059 ! neurogenic field relationship: end ZFS:0000022 ! Gastrula:Bud relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007061 name: epibranchial field namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-080417-141 is_a: ZFA:0007059 ! neurogenic field relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0007062 name: olfactory field namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-080417-142 is_a: ZFA:0007059 ! neurogenic field relationship: end ZFS:0000025 ! Segmentation:10-13 somites relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009000 name: cell namespace: zebrafish_anatomy def: "Minute protoplasmic masses that make up organized tissue, usually consisting of a nucleus which is surrounded by protoplasm which contains the various organelles and is enclosed in the cell or plasma membrane. Cells are the fundamental, structural, and functional units of living organisms." [CL:curator] xref: CARO:0000013 xref: CL:0000000 xref: ZFIN:ZDB-ANAT-060816-76 is_a: ZFA:0000037 ! anatomical structure relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001094 ! whole organism relationship: start ZFS:0000001 ! Zygote:1-cell [Term] id: ZFA:0009001 name: receptor cell (sensu Animalia) namespace: zebrafish_anatomy xref: CL:0000006 xref: ZFIN:ZDB-ANAT-070308-1 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009002 name: early embryonic cell namespace: zebrafish_anatomy xref: CL:0000007 xref: ZFIN:ZDB-ANAT-070308-2 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009003 name: cranial neural crest cell namespace: zebrafish_anatomy xref: CL:0000008 xref: ZFIN:ZDB-ANAT-070308-3 is_a: ZFA:0009165 ! neural crest cell relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009004 name: trunk neural crest cell namespace: zebrafish_anatomy xref: CL:0000011 xref: ZFIN:ZDB-ANAT-070308-4 is_a: ZFA:0009165 ! neural crest cell relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009005 name: spermatocyte namespace: zebrafish_anatomy def: "A male germ cell that develops from spermatogonia. The euploid primary spermatocytes undergo meiosis and give rise to the haploid secondary spermatocytes which in turn give rise to spermatids." [CL:curator] xref: CL:0000017 xref: ZFIN:ZDB-ANAT-060131-74 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0001337 ! spermatogonia relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000598 ! testis relationship: start ZFS:0000043 ! Juvenile:Days 45-89 [Term] id: ZFA:0009006 name: sperm namespace: zebrafish_anatomy def: "A mature male germ cell that develops from a spermatid." [CL:curator] synonym: "sperm cell" RELATED [] synonym: "spermatozoid" RELATED [] synonym: "spermatozoon" RELATED [] xref: CL:0000019 xref: ZFIN:ZDB-ANAT-070308-5 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009007 name: spermatogonium namespace: zebrafish_anatomy def: "An euploid male germ cell of an early stage of spermatogenesis." [CL:curator] xref: CL:0000020 xref: ZFIN:ZDB-ANAT-070308-6 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009008 name: egg namespace: zebrafish_anatomy synonym: "ovum" RELATED [] xref: CL:0000025 xref: ZFIN:ZDB-ANAT-070308-7 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009009 name: neuron neural crest derived namespace: zebrafish_anatomy xref: CL:0000029 xref: ZFIN:ZDB-ANAT-070308-8 relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009010 name: glioblast namespace: zebrafish_anatomy xref: CL:0000030 xref: ZFIN:ZDB-ANAT-050915-148 relationship: develops_from ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0009080 ! neurectodermal cell relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009011 name: neuroblast namespace: zebrafish_anatomy xref: CL:0000031 xref: ZFIN:ZDB-ANAT-070308-9 is_a: ZFA:0009019 ! neuronal stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009012 name: neuroplacodal cell namespace: zebrafish_anatomy xref: CL:0000032 xref: ZFIN:ZDB-ANAT-070308-10 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009013 name: single fate stem cell namespace: zebrafish_anatomy xref: CL:0000035 xref: ZFIN:ZDB-ANAT-070308-11 is_a: ZFA:0009307 ! somatic stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009014 name: hematopoietic stem cell namespace: zebrafish_anatomy def: "A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system." [CL:curator] synonym: "colony forming unit hematopoietic" RELATED [] synonym: "hematopoietic progenitor cell" RELATED [] synonym: "hemopoietic progenitor cell" RELATED [] synonym: "hemopoietic stem cell" RELATED [] synonym: "HSC" RELATED [] xref: CL:0000037 xref: ZFIN:ZDB-ANAT-050915-141 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009258 ! angioblastic mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005023 ! hematopoietic system relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0009015 name: erythroid progenitor cell namespace: zebrafish_anatomy def: "A progenitor cell committed to the erythroid lineage." [ZFIN:ZDB-PUB-070221-1] synonym: "BFU-E" RELATED [] synonym: "blast forming unit erythroid" RELATED [] synonym: "burst forming unit erythroid" RELATED [] synonym: "CFU-E" RELATED [] synonym: "colony forming unit erythroid" RELATED [] synonym: "erythroid stem cell" RELATED [] xref: CL:0000038 xref: ZFIN:ZDB-ANAT-070308-12 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009022 ! megakaryocyte erythroid progenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009016 name: germ line cell namespace: zebrafish_anatomy xref: CL:0000039 xref: ZFIN:ZDB-ANAT-070308-13 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009017 name: monoblast namespace: zebrafish_anatomy def: "A progenitor cell committed to the monocyte lineage. http://www.copewithcytokines.de" [CL:curator] synonym: "CFU-M" RELATED [] synonym: "colony forming unit macrophage" RELATED [] synonym: "monocyte stem cell" RELATED [] xref: CL:0000040 xref: ZFIN:ZDB-ANAT-060331-82 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009251 ! granulocyte monocyte progenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009018 name: neutrophilic myeloblast namespace: zebrafish_anatomy def: "A myeloblast committed to the neutrophil lineage. A myeloblast is the most primitive precursor in the granulocytic series, having fine, evenly distributed chromatin, several nucleoli, and a nongranular basophilic cytoplasm." [ZFIN:ZDB-PUB-070221-1] synonym: "myeloblast" RELATED [] synonym: "neutrophilic granuloblast" RELATED [] xref: CL:0000042 xref: ZFIN:ZDB-ANAT-060331-76 is_a: ZFA:0009353 ! myeloblast relationship: develops_from ZFA:0009352 ! neutrophil progenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009019 name: neuronal stem cell namespace: zebrafish_anatomy xref: CL:0000047 xref: ZFIN:ZDB-ANAT-070308-14 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009080 ! neurectodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009020 name: multi fate stem cell namespace: zebrafish_anatomy def: "A stem cell that can give rise to mulitple lineages of cells." [CL:curator] synonym: "multipotent stem cell" RELATED [] xref: CL:0000048 xref: ZFIN:ZDB-ANAT-070308-15 is_a: ZFA:0009307 ! somatic stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009021 name: common myeloid progenitor namespace: zebrafish_anatomy def: "A progenitor cell committed to myeloid lineage, including the megakaryocyte and erythroid lineages." [ZFIN:ZDB-PUB-070221-2] synonym: "cfu-gemm" RELATED [ZFIN:ZDB-PUB-070221-2] synonym: "CFU-S" RELATED [ZFIN:ZDB-PUB-070221-2] synonym: "CMP" RELATED [ZFIN:ZDB-PUB-070221-2] synonym: "colony forming unit granulocyte, erythrocyte, macrophage, and megakaryocyte" RELATED [ZFIN:ZDB-PUB-070221-2] synonym: "multipotential myeloid stem cell" RELATED [ZFIN:ZDB-PUB-070221-2] synonym: "myeloid stem cell" RELATED [ZFIN:ZDB-PUB-070221-2] synonym: "pluripotent stem cell (bone marrow)" RELATED [ZFIN:ZDB-PUB-070221-2] xref: CL:0000049 xref: ZFIN:ZDB-ANAT-060331-73 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009022 name: megakaryocyte erythroid progenitor cell namespace: zebrafish_anatomy def: "A progenitor cell committed to the megakaryocyte and erythroid lineages." [CL:curator] synonym: "CFU-EM" RELATED [] synonym: "colony forming unit erythroid megakaryocyte" RELATED [] synonym: "MEP" RELATED [] xref: CL:0000050 xref: ZFIN:ZDB-ANAT-070308-16 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009023 name: common lymphocyte progenitor namespace: zebrafish_anatomy def: "A progenitor cell committed to the lymphoid lineage." [CL:curator] synonym: "CLP" RELATED [] synonym: "committed lymphopoietic stem cell" RELATED [] synonym: "early lymphocyte progenitor" RELATED [] synonym: "ELP" RELATED [] synonym: "lymphoblast" RELATED [] synonym: "lymphoid stem cell" RELATED [] synonym: "lymphopoietic stem cell" RELATED [] xref: CL:0000051 xref: ZFIN:ZDB-ANAT-050915-142 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0009024 name: totipotent stem cell namespace: zebrafish_anatomy def: "A stem cell from which all cells of the body can form." [CL:curator] xref: CL:0000052 xref: ZFIN:ZDB-ANAT-070308-17 is_a: ZFA:0009307 ! somatic stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009025 name: myoblast namespace: zebrafish_anatomy def: "An embryonic (precursor) cell of the myogenic lineage that develops from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes." [CL:curator] xref: CL:0000056 xref: ZFIN:ZDB-ANAT-050915-157 relationship: develops_from ZFA:0009179 ! muscle stem cell relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0009026 name: fibroblast namespace: zebrafish_anatomy def: "A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules." [CL:curator] xref: CL:0000057 xref: ZFIN:ZDB-ANAT-070308-18 relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009027 name: chondroblast namespace: zebrafish_anatomy xref: CL:0000058 xref: ZFIN:ZDB-ANAT-050915-153 relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: develops_from ZFA:0009138 ! mesodermal cell relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0009028 name: ameloblast namespace: zebrafish_anatomy def: "A cylindrical epithelial cell in the innermost layer of the enamal organ. Their functions include contribution to the development of the dentinoenamel junction by the deposition of a layer of the matrix, thus producing the foundation for the prisms (the structural units of the dental enamal), and production of the matrix for the enamel prisms and interprismatic substance. (From Jablonski's Dictionary of Dentistry, 1992)." [CL:curator] xref: CL:0000059 xref: ZFIN:ZDB-ANAT-070308-19 relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009029 name: odontoblast namespace: zebrafish_anatomy xref: CL:0000060 xref: ZFIN:ZDB-ANAT-070308-20 relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0005141 ! tooth pulp relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009030 name: cementoblast namespace: zebrafish_anatomy xref: CL:0000061 xref: ZFIN:ZDB-ANAT-070308-21 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009031 name: osteoblast namespace: zebrafish_anatomy def: "A bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone." [CL:curator] xref: CL:0000062 xref: ZFIN:ZDB-ANAT-070308-22 relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: develops_from ZFA:0009184 ! osteoprogenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009032 name: ciliated cell namespace: zebrafish_anatomy xref: CL:0000064 xref: ZFIN:ZDB-ANAT-070308-23 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009033 name: ependymal cell namespace: zebrafish_anatomy def: "A neurectoderm derived cell that lines the neural lumen." [CL:curator] synonym: "ependymocyte" RELATED [] xref: CL:0000065 xref: ZFIN:ZDB-ANAT-070308-24 is_a: ZFA:0009035 ! ciliated epithelial cell relationship: develops_from ZFA:0009306 ! neuroepithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009034 name: epithelial cell namespace: zebrafish_anatomy def: "A cell that is usually found in a two-dimensional sheet with a free surface." [CL:curator] xref: CL:0000066 xref: ZFIN:ZDB-ANAT-070308-25 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009035 name: ciliated epithelial cell namespace: zebrafish_anatomy xref: CL:0000067 xref: ZFIN:ZDB-ANAT-070308-26 is_a: ZFA:0009032 ! ciliated cell is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009036 name: blood vessel endothelial cell namespace: zebrafish_anatomy xref: CL:0000071 xref: ZFIN:ZDB-ANAT-050915-152 is_a: ZFA:0009039 ! squamous epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0009138 ! mesodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009037 name: barrier epithelial cell namespace: zebrafish_anatomy xref: CL:0000073 xref: ZFIN:ZDB-ANAT-070308-27 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009038 name: columnar/cuboidal epithelial cell namespace: zebrafish_anatomy xref: CL:0000075 xref: ZFIN:ZDB-ANAT-070308-28 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009039 name: squamous epithelial cell namespace: zebrafish_anatomy xref: CL:0000076 xref: ZFIN:ZDB-ANAT-070308-29 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009040 name: mesothelial cell namespace: zebrafish_anatomy xref: CL:0000077 xref: ZFIN:ZDB-ANAT-070308-30 is_a: ZFA:0009039 ! squamous epithelial cell is_a: ZFA:0009130 ! lining cell relationship: develops_from ZFA:0009138 ! mesodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009041 name: peridermal cell namespace: zebrafish_anatomy xref: CL:0000078 xref: ZFIN:ZDB-ANAT-070308-31 is_a: ZFA:0009039 ! squamous epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009042 name: stratified epithelial cell namespace: zebrafish_anatomy xref: CL:0000079 xref: ZFIN:ZDB-ANAT-070308-32 relationship: develops_from ZFA:0009180 ! stratified epithelial stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009043 name: circulating cell namespace: zebrafish_anatomy def: "A cell which moves among different tissues of the body, via blood, lymph, or other medium." [CL:curator] xref: CL:0000080 xref: ZFIN:ZDB-ANAT-070308-33 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009044 name: blood cell namespace: zebrafish_anatomy def: "A cell found predominately in the blood." [CL:curator] xref: CL:0000081 xref: ZFIN:ZDB-ANAT-070308-34 is_a: ZFA:0009043 ! circulating cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009045 name: epithelial cell of pancreas namespace: zebrafish_anatomy xref: CL:0000083 xref: ZFIN:ZDB-ANAT-070308-35 relationship: develops_from ZFA:0009139 ! endodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009046 name: T cell namespace: zebrafish_anatomy def: "A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex." [ZFIN:ZDB-PUB-070221-3] synonym: "T lymphocyte" RELATED [] synonym: "T-cell" RELATED [] synonym: "T-lymphocyte" RELATED [] xref: CL:0000084 xref: ZFIN:ZDB-ANAT-050915-145 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009350 ! pro-T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009047 name: osteoclast namespace: zebrafish_anatomy def: "A specialized phagocytic cell associated with the absorption and removal of bone." [ZFIN:ZDB-PUB-070221-3] comment: Osteoclasts develop directly from monocytes. synonym: "chondroclast" RELATED [] xref: CL:0000092 xref: ZFIN:ZDB-ANAT-070308-36 relationship: develops_from ZFA:0009265 ! monocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009048 name: granulocyte namespace: zebrafish_anatomy def: "A leukocyte with abundant granules in the cytoplasm." [CL:curator] xref: CL:0000094 xref: ZFIN:ZDB-ANAT-060816-79 is_a: ZFA:0009326 ! myeloid leukocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009049 name: mature neutrophil namespace: zebrafish_anatomy def: "A fully differentiated neutrophil, a granular leukocyte having a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes." [CL:curator] synonym: "mature neutrocyte" RELATED [] synonym: "mature neutrophil leucocyte" RELATED [] synonym: "mature neutrophil leukocyte" RELATED [] synonym: "mature neutrophilic leucocyte" RELATED [] synonym: "mature neutrophilic leukocyte" RELATED [] synonym: "neutrophil" RELATED [] synonym: "PMN" RELATED [] synonym: "poly" RELATED [] synonym: "polymorphonuclear leucocyte" RELATED [] synonym: "polymorphonuclear leukocyte" RELATED [] synonym: "polymorphonuclear neutrophil" RELATED [] synonym: "polynuclear neutrophilic leucocyte" RELATED [] synonym: "polynuclear neutrophilic leukocyte" RELATED [] xref: CL:0000096 xref: ZFIN:ZDB-ANAT-060331-81 is_a: ZFA:0009327 ! neutrophil relationship: develops_from ZFA:0009254 ! band form neutrophil relationship: develops_from ZFA:0009328 ! immature neutrophil relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009050 name: sensory epithelial cell namespace: zebrafish_anatomy xref: CL:0000098 xref: ZFIN:ZDB-ANAT-070308-37 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009306 ! neuroepithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009051 name: interneuron namespace: zebrafish_anatomy def: "Most generally any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region as contrasted with projection neurons which have axons projecting to other brain regions." [CL:curator] xref: CL:0000099 xref: ZFIN:ZDB-ANAT-070308-38 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009052 name: motor neuron namespace: zebrafish_anatomy def: "A neuron which activate muscle cells." [CL:curator] synonym: "efferent neuron" RELATED [] synonym: "motoneuron" RELATED [] xref: CL:0000100 xref: ZFIN:ZDB-ANAT-070308-39 is_a: ZFA:0009239 ! efferent neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009053 name: sensory neuron namespace: zebrafish_anatomy alt_id: ZFA:0000432 xref: CL:0000101 xref: ZFIN:ZDB-ANAT-011113-357 is_a: ZFA:0009238 ! afferent neuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: start ZFS:0000030 ! Pharyngula:Prim-15 [Term] id: ZFA:0009054 name: polymodal neuron namespace: zebrafish_anatomy xref: CL:0000102 xref: ZFIN:ZDB-ANAT-070308-40 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009055 name: bipolar neuron namespace: zebrafish_anatomy def: "A type of interneuron that has two neurites, usually an axon and a dendrite, extending from opposite poles of an ovoid cell body." [ZFIN:ZDB-PUB-070221-4] xref: CL:0000103 xref: ZFIN:ZDB-ANAT-051116-45 is_a: ZFA:0009051 ! interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009056 name: multipolar neuron namespace: zebrafish_anatomy xref: CL:0000104 xref: ZFIN:ZDB-ANAT-070308-41 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009057 name: pseudounipolar neuron namespace: zebrafish_anatomy xref: CL:0000105 xref: ZFIN:ZDB-ANAT-070308-42 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009058 name: unipolar neuron namespace: zebrafish_anatomy xref: CL:0000106 xref: ZFIN:ZDB-ANAT-070308-43 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009059 name: autonomic neuron namespace: zebrafish_anatomy xref: CL:0000107 xref: ZFIN:ZDB-ANAT-070308-44 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001574 ! autonomic nervous system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009060 name: cholinergic neuron namespace: zebrafish_anatomy xref: CL:0000108 xref: ZFIN:ZDB-ANAT-070308-45 is_a: ZFA:0009059 ! autonomic neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009061 name: adrenergic neuron namespace: zebrafish_anatomy xref: CL:0000109 xref: ZFIN:ZDB-ANAT-070308-46 is_a: ZFA:0009059 ! autonomic neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009062 name: peptidergic neuron namespace: zebrafish_anatomy xref: CL:0000110 xref: ZFIN:ZDB-ANAT-070308-47 is_a: ZFA:0009059 ! autonomic neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009063 name: peripheral neuron namespace: zebrafish_anatomy xref: CL:0000111 xref: ZFIN:ZDB-ANAT-070308-48 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009064 name: mononuclear phagocyte namespace: zebrafish_anatomy def: "A vertebrate phagocyte with a single nucleus." [ZFIN:ZDB-PUB-070221-3] xref: CL:0000113 xref: ZFIN:ZDB-ANAT-060331-84 is_a: ZFA:0009357 ! mononuclear cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009065 name: endothelial cell namespace: zebrafish_anatomy xref: CL:0000115 xref: ZFIN:ZDB-ANAT-070308-49 is_a: ZFA:0009130 ! lining cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009066 name: pioneer neuron namespace: zebrafish_anatomy alt_id: ZFA:0000409 xref: CL:0000116 xref: ZFIN:ZDB-ANAT-011113-334 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000048 ! olfactory placode relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0009067 name: CNS neuron (sensu Vertebrata) namespace: zebrafish_anatomy xref: CL:0000117 xref: ZFIN:ZDB-ANAT-070308-50 is_a: ZFA:0009248 ! neuron relationship: develops_from ZFA:0009168 ! neuroblast (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009068 name: basket cell namespace: zebrafish_anatomy xref: CL:0000118 xref: ZFIN:ZDB-ANAT-070308-51 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009069 name: Golgi cell namespace: zebrafish_anatomy xref: CL:0000119 xref: ZFIN:ZDB-ANAT-070308-52 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009070 name: granule cell namespace: zebrafish_anatomy xref: CL:0000120 xref: ZFIN:ZDB-ANAT-070308-53 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009071 name: Purkinje cell namespace: zebrafish_anatomy def: "The output neuron of the cerebellar cortex." [CL:curator] xref: CL:0000121 xref: ZFIN:ZDB-ANAT-070308-54 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) is_a: ZFA:0009239 ! efferent neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009072 name: stellate cell namespace: zebrafish_anatomy xref: CL:0000122 xref: ZFIN:ZDB-ANAT-070308-55 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009073 name: glial cell namespace: zebrafish_anatomy alt_id: ZFA:0000025 def: "A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons." [CL:curator] synonym: "neuroglia" RELATED [] xref: CL:0000125 xref: ZFIN:ZDB-ANAT-010921-436 relationship: develops_from ZFA:0009010 ! glioblast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000396 ! nervous system relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0009074 name: macroglial cell namespace: zebrafish_anatomy xref: CL:0000126 xref: ZFIN:ZDB-ANAT-070308-56 is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009075 name: astrocyte namespace: zebrafish_anatomy def: "A class of large neuroglial (macroglial) cells in the central nervous system - the largest and most numerous neuroglial cells in the brain and spinal cord. Astrocytes (from 'star' cells) are irregularly shaped with many long processes, including those with 'end feet' which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and 'reactive astrocytes' (along with microglia) respond to injury." [CL:curator] xref: CL:0000127 xref: ZFIN:ZDB-ANAT-050915-160 is_a: ZFA:0009074 ! macroglial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009076 name: oligodendrocyte namespace: zebrafish_anatomy def: "A class of large neuroglial (macroglial) cells in the central nervous system. Form the insulating myelin sheath of axons in the central nervous system." [CL:curator] synonym: "oligodendroglia" RELATED [] xref: CL:0000128 xref: ZFIN:ZDB-ANAT-060131-75 is_a: ZFA:0009074 ! macroglial cell relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009077 name: microglial cell namespace: zebrafish_anatomy def: "A small, migratory, phagocytic, interstitial cell of hematopoietic origin found in the central nervous system. Microglial cells are of various forms and may have slender branched processes." [ZFIN:ZDB-PUB-070221-1] synonym: "microglia" RELATED [] xref: CL:0000129 xref: ZFIN:ZDB-ANAT-070308-57 is_a: ZFA:0009141 ! macrophage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009078 name: gut endothelial cell namespace: zebrafish_anatomy xref: CL:0000131 xref: ZFIN:ZDB-ANAT-070308-58 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0009139 ! endodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009079 name: corneal endothelial cell namespace: zebrafish_anatomy def: "Cell of the single layer of large flattened cells covering the surface of the cornea." [CL:curator] xref: CL:0000132 xref: ZFIN:ZDB-ANAT-070308-59 is_a: ZFA:0009039 ! squamous epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009080 name: neurectodermal cell namespace: zebrafish_anatomy synonym: "neurectoderm cell" RELATED [] xref: CL:0000133 xref: ZFIN:ZDB-ANAT-070308-60 relationship: develops_from ZFA:0009137 ! ectodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009081 name: mesenchymal cell namespace: zebrafish_anatomy def: "A cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets." [CL:curator] xref: CL:0000134 xref: ZFIN:ZDB-ANAT-070308-61 relationship: develops_from ZFA:0009138 ! mesodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009082 name: fat cell namespace: zebrafish_anatomy def: "A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of tryglycerides." [CL:curator] synonym: "adipocyte" RELATED [] synonym: "lipocyte" RELATED [] xref: CL:0000136 xref: ZFIN:ZDB-ANAT-070308-62 relationship: develops_from ZFA:0009026 ! fibroblast relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009083 name: osteocyte namespace: zebrafish_anatomy def: "A mature osteoblast that has become embedded in the bone matrix. They occupy a small cavity, called lacuna, in the matrix and are connected to adjacent osteocytes via protoplasmic projections called canaliculi." [CL:curator] xref: CL:0000137 xref: ZFIN:ZDB-ANAT-070308-63 relationship: develops_from ZFA:0009031 ! osteoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009084 name: chondrocyte namespace: zebrafish_anatomy def: "Polymorphic cell that form cartilage." [CL:curator] xref: CL:0000138 xref: ZFIN:ZDB-ANAT-050915-154 is_a: ZFA:0009093 ! GAG secreting cell is_a: ZFA:0009287 ! collagen secreting cell relationship: develops_from ZFA:0009027 ! chondroblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009085 name: amelocyte namespace: zebrafish_anatomy xref: CL:0000139 xref: ZFIN:ZDB-ANAT-070308-64 is_a: ZFA:0009089 ! simple columnar epithelial cell relationship: develops_from ZFA:0009028 ! ameloblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009086 name: odontocyte namespace: zebrafish_anatomy xref: CL:0000140 xref: ZFIN:ZDB-ANAT-070308-65 relationship: develops_from ZFA:0009029 ! odontoblast relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009087 name: cementocyte namespace: zebrafish_anatomy xref: CL:0000141 xref: ZFIN:ZDB-ANAT-070308-66 relationship: develops_from ZFA:0009030 ! cementoblast relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009088 name: professional antigen presenting cell namespace: zebrafish_anatomy def: "A cell capable of processing and presenting lipid and protein antigens to T cells in order to initiate an immune response." [ZFIN:ZDB-PUB-070221-3] comment: Note change of name; nearly all somatic cells can present antigens to T cells via MHC Class I complexes leading to effector responses, but professional antigen presenting cells constituitively express MHC Class II as well as constimulatory molecules, and thus can initiate immune responses via T cells. synonym: "APC" RELATED [] xref: CL:0000145 xref: ZFIN:ZDB-ANAT-070308-67 is_a: ZFA:0009309 ! leukocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009089 name: simple columnar epithelial cell namespace: zebrafish_anatomy xref: CL:0000146 xref: ZFIN:ZDB-ANAT-070308-68 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009090 name: pigment cell namespace: zebrafish_anatomy alt_id: ZFA:0000057 synonym: "chromatocyte" RELATED [] synonym: "chromatophore" RELATED [] xref: CL:0000147 xref: ZFIN:ZDB-ANAT-010921-474 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0009091 name: melanocyte namespace: zebrafish_anatomy alt_id: ZFA:0001091 def: "A pigment cell derived from the neural crest. Contains melanin-filled pigment granules, which gives a brown to black appearance." [CL:curator] synonym: "melanophore" RELATED [] xref: CL:0000148 xref: ZFIN:ZDB-ANAT-040708-2 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0009249 ! melanoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0009092 name: exocrine cell namespace: zebrafish_anatomy def: "A cell of an exocrine gland, i.e. a gland that discharges its secretion via a duct." [ZFIN:ZDB-PUB-070221-5] xref: CL:0000152 xref: ZFIN:ZDB-ANAT-070308-69 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009093 name: GAG secreting cell namespace: zebrafish_anatomy synonym: "hyaluronic acid secreting cell" RELATED [] xref: CL:0000153 xref: ZFIN:ZDB-ANAT-070308-70 is_a: ZFA:0009162 ! extracellular matrix secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009094 name: goblet cell namespace: zebrafish_anatomy def: "A cell of the epithelial lining that produce and secrete mucins." [CL:curator] synonym: "chalice cell" RELATED [] xref: CL:0000160 xref: ZFIN:ZDB-ANAT-070308-71 is_a: ZFA:0009159 ! mucus secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009095 name: acid secreting cell namespace: zebrafish_anatomy xref: CL:0000161 xref: ZFIN:ZDB-ANAT-070308-72 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009096 name: endocrine cell namespace: zebrafish_anatomy def: "A cell of an endocrine gland, ductless glands that secrete substances which are released directly into the circulation and which influence metabolism and other body functions." [CL:curator] xref: CL:0000163 xref: ZFIN:ZDB-ANAT-060816-68 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001158 ! endocrine system relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009097 name: enteroendocrine cell namespace: zebrafish_anatomy xref: CL:0000164 xref: ZFIN:ZDB-ANAT-070308-73 is_a: ZFA:0009096 ! endocrine cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009098 name: neuroendocrine cell namespace: zebrafish_anatomy def: "A neuron that has the specialized function to produce and secrete hormones, and that constitutes, in whole or in part, an endocrine organ or system." [CL:curator] synonym: "neurosecretory cell" RELATED [] xref: CL:0000165 xref: ZFIN:ZDB-ANAT-070308-74 is_a: ZFA:0009096 ! endocrine cell is_a: ZFA:0009190 ! electrically responsive cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009099 name: chromaffin cell namespace: zebrafish_anatomy def: "A cell that stores epinephrine secretory vesicles. During times of stress, the nervous system signals the vesicles to secrete their hormonal content. Their name derives from their ability to stain a brownish color with chromic salts. Characteristically, they are located in the adrenal medulla and paraganglia of the sympathetic nervous system." [CL:curator] synonym: "phaeochromocyte" RELATED [] xref: CL:0000166 xref: ZFIN:ZDB-ANAT-050915-151 is_a: ZFA:0009098 ! neuroendocrine cell relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009100 name: peptide hormone secreting cell namespace: zebrafish_anatomy xref: CL:0000167 xref: ZFIN:ZDB-ANAT-060816-69 is_a: ZFA:0009096 ! endocrine cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009101 name: insulin secreting cell namespace: zebrafish_anatomy xref: CL:0000168 xref: ZFIN:ZDB-ANAT-070308-75 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009102 name: pancreatic B cell namespace: zebrafish_anatomy synonym: "beta cell" RELATED [] xref: CL:0000169 xref: ZFIN:ZDB-ANAT-070308-76 is_a: ZFA:0009101 ! insulin secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009103 name: glucagon secreting cell namespace: zebrafish_anatomy xref: CL:0000170 xref: ZFIN:ZDB-ANAT-070308-77 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009104 name: pancreatic A cell namespace: zebrafish_anatomy synonym: "alpha cell" RELATED [] xref: CL:0000171 xref: ZFIN:ZDB-ANAT-070308-78 is_a: ZFA:0009103 ! glucagon secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009105 name: somatostatin secreting cell namespace: zebrafish_anatomy xref: CL:0000172 xref: ZFIN:ZDB-ANAT-070308-79 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009106 name: steroid hormone secreting cell namespace: zebrafish_anatomy xref: CL:0000174 xref: ZFIN:ZDB-ANAT-070308-80 is_a: ZFA:0009096 ! endocrine cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009107 name: testosterone secreting cell namespace: zebrafish_anatomy xref: CL:0000177 xref: ZFIN:ZDB-ANAT-070308-81 is_a: ZFA:0009106 ! steroid hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009108 name: Leydig cell namespace: zebrafish_anatomy synonym: "interstitial cell" RELATED [] xref: CL:0000178 xref: ZFIN:ZDB-ANAT-070308-82 is_a: ZFA:0009107 ! testosterone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009109 name: progesterone secreting cell namespace: zebrafish_anatomy xref: CL:0000179 xref: ZFIN:ZDB-ANAT-070308-83 is_a: ZFA:0009106 ! steroid hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009110 name: estradiol secreting cell namespace: zebrafish_anatomy xref: CL:0000180 xref: ZFIN:ZDB-ANAT-070308-84 is_a: ZFA:0009106 ! steroid hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009111 name: hepatocyte namespace: zebrafish_anatomy def: "The main structural component of the liver. They are specialized epithelial cells that are organized into interconnected plates called lobules." [CL:curator] xref: CL:0000182 xref: ZFIN:ZDB-ANAT-070308-85 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: develops_from ZFA:0009139 ! endodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009112 name: pericyte namespace: zebrafish_anatomy def: "A slender, contractile, mesenchymal-like cell found in close association with capillary walls. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells. (From Stedman, 26th ed)." [CL:curator] xref: CL:0000184 xref: ZFIN:ZDB-ANAT-070308-86 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009113 name: myoepithelial cell namespace: zebrafish_anatomy xref: CL:0000185 xref: ZFIN:ZDB-ANAT-070308-87 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009138 ! mesodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009114 name: muscle cell namespace: zebrafish_anatomy def: "A mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle." [CL:curator] synonym: "myocyte" RELATED [] xref: CL:0000187 xref: ZFIN:ZDB-ANAT-050915-158 is_a: ZFA:0009190 ! electrically responsive cell relationship: develops_from ZFA:0009025 ! myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0009115 name: skeletal muscle cell namespace: zebrafish_anatomy synonym: "striated muscle cell" RELATED [] xref: CL:0000188 xref: ZFIN:ZDB-ANAT-050915-159 is_a: ZFA:0009114 ! muscle cell relationship: develops_from ZFA:0009236 ! skeletal muscle myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0009116 name: slow muscle cell namespace: zebrafish_anatomy alt_id: ZFA:0001087 synonym: "red muscle cell" RELATED [] xref: CL:0000189 xref: ZFIN:ZDB-ANAT-031211-15 is_a: ZFA:0009115 ! skeletal muscle cell relationship: develops_from ZFA:0001056 ! myotome relationship: develops_from ZFA:0001373 ! migratory slow muscle precursor cell relationship: develops_from ZFA:0009368 ! slow muscle myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0009117 name: fast muscle cell namespace: zebrafish_anatomy alt_id: ZFA:0001088 synonym: "white muscle cell" RELATED [] xref: CL:0000190 xref: ZFIN:ZDB-ANAT-031211-3 is_a: ZFA:0009115 ! skeletal muscle cell relationship: develops_from ZFA:0001056 ! myotome relationship: develops_from ZFA:0009369 ! fast muscle myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000024 ! Segmentation:5-9 somites [Term] id: ZFA:0009118 name: smooth muscle cell namespace: zebrafish_anatomy def: "A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast)." [CL:curator] synonym: "non-striated muscle cell" RELATED [] xref: CL:0000192 xref: ZFIN:ZDB-ANAT-070308-88 is_a: ZFA:0009114 ! muscle cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009119 name: pain receptor cell namespace: zebrafish_anatomy def: "The peripheral receptor for pain. Includes receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli. All mammalian nociceptors are free nerve endings." [CL:curator] synonym: "nociceptor" RELATED [] synonym: "nocireceptor" RELATED [] xref: CL:0000198 xref: ZFIN:ZDB-ANAT-070308-89 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009120 name: mechanoreceptor cell namespace: zebrafish_anatomy def: "A cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system." [CL:curator] xref: CL:0000199 xref: ZFIN:ZDB-ANAT-070308-90 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009121 name: auditory receptor cell namespace: zebrafish_anatomy xref: CL:0000201 xref: ZFIN:ZDB-ANAT-070308-91 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009122 name: auditory hair cell namespace: zebrafish_anatomy xref: ZFIN:ZDB-ANAT-011113-512 is_obsolete: true [Term] id: ZFA:0009123 name: thermoreceptor cell namespace: zebrafish_anatomy def: "A cellular receptor which mediates the sense of temperature. Thermoreceptors in vertebrates are mostly located under the skin. In mammals there are separate types of thermoreceptors for cold and for warmth and pain receptor cells which detect cold or heat extreme enough to cause pain." [CL:curator] xref: CL:0000205 xref: ZFIN:ZDB-ANAT-070308-92 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009124 name: chemoreceptor cell namespace: zebrafish_anatomy def: "A cell specialized to detect chemical substances and relay that information centrally in the nervous system. Chemoreceptors may monitor external stimuli, as in taste and olfaction, or internal stimuli, such as the concentrations of oxygen and carbon dioxide in the blood." [CL:curator] xref: CL:0000206 xref: ZFIN:ZDB-ANAT-070308-93 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009125 name: olfactory receptor cell namespace: zebrafish_anatomy synonym: "olfactory receptor neuron" RELATED [] synonym: "olfactory sensory neuron" RELATED [] synonym: "Schultze's cell" RELATED [] xref: CL:0000207 xref: ZFIN:ZDB-ANAT-070308-94 is_a: ZFA:0009124 ! chemoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009126 name: taste receptor cell namespace: zebrafish_anatomy xref: CL:0000209 xref: ZFIN:ZDB-ANAT-070308-95 is_a: ZFA:0009124 ! chemoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009127 name: photoreceptor cell namespace: zebrafish_anatomy def: "A cell specialized to detect and transduce light." [CL:curator] xref: CL:0000210 xref: ZFIN:ZDB-ANAT-070308-96 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009128 name: electrically active cell namespace: zebrafish_anatomy def: "A cell whose function is determined by the generation or the reception of an electric signal." [CL:curator] xref: CL:0000211 xref: ZFIN:ZDB-ANAT-070308-97 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009129 name: absorptive cell namespace: zebrafish_anatomy def: "A cell that takes up stuff and metabolises it." [CL:curator] xref: CL:0000212 xref: ZFIN:ZDB-ANAT-070308-98 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009130 name: lining cell namespace: zebrafish_anatomy def: "A cell within an epithelial cell sheet whose main function is to act as an internal or external covering for a tissue or an organism." [CL:curator] synonym: "boundary cell" RELATED [] xref: CL:0000213 xref: ZFIN:ZDB-ANAT-070308-99 is_a: ZFA:0009132 ! barrier cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009131 name: synovial cell namespace: zebrafish_anatomy xref: CL:0000214 xref: ZFIN:ZDB-ANAT-070308-100 is_a: ZFA:0009093 ! GAG secreting cell is_a: ZFA:0009130 ! lining cell relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009132 name: barrier cell namespace: zebrafish_anatomy def: "A cell whose primary function is to prevent the transport of stuff across compartments." [CL:curator] xref: CL:0000215 xref: ZFIN:ZDB-ANAT-070308-101 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009133 name: Sertoli cell namespace: zebrafish_anatomy def: "A supporting cell projecting inward from the basement membrane of seminiferous tubules. They surround and nourish the developing male germ cells and secrete androgen binding protein. Their tight junctions with the spermatogonia and spermatocytes provide a blood-testis barrier." [CL:curator] xref: CL:0000216 xref: ZFIN:ZDB-ANAT-070308-102 is_a: ZFA:0009132 ! barrier cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009134 name: insulating cell namespace: zebrafish_anatomy xref: CL:0000217 xref: ZFIN:ZDB-ANAT-070308-103 is_a: ZFA:0009132 ! barrier cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009135 name: Schwann cell namespace: zebrafish_anatomy def: "A neuroglial cell of the peripheral nervous system which forms the insulating myelin sheaths of peripheral axons." [CL:curator] xref: CL:0000218 xref: ZFIN:ZDB-ANAT-070308-104 is_a: ZFA:0009134 ! insulating cell is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) is_a: ZFA:0009163 ! myelin accumulating cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009136 name: motile cell namespace: zebrafish_anatomy def: "A cell that moves by its own activities." [CL:curator] xref: CL:0000219 xref: ZFIN:ZDB-ANAT-070308-105 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009137 name: ectodermal cell namespace: zebrafish_anatomy def: "A cell of the outer of the three germ layers of the embryo." [CL:curator] synonym: "ectoderm cell" RELATED [] xref: CL:0000221 xref: ZFIN:ZDB-ANAT-070308-106 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009138 name: mesodermal cell namespace: zebrafish_anatomy def: "A cell of the middle germ layer of the embryo." [CL:curator] synonym: "mesoblast" RELATED [] synonym: "mesoderm cell" RELATED [] xref: CL:0000222 xref: ZFIN:ZDB-ANAT-070308-107 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009139 name: endodermal cell namespace: zebrafish_anatomy def: "A cell of the inner of the three germ layers of the embryo." [CL:curator] synonym: "endoderm cell" RELATED [] xref: CL:0000223 xref: ZFIN:ZDB-ANAT-070308-108 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009140 name: phagocyte namespace: zebrafish_anatomy def: "Any cell capable of ingesting particulate matter via phagocytosis." [ZFIN:ZDB-PUB-070221-1] xref: CL:0000234 xref: ZFIN:ZDB-ANAT-070308-109 is_a: ZFA:0009136 ! motile cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009141 name: macrophage namespace: zebrafish_anatomy def: "A mononuclear phagocyte which differentiates from monocytes, is typically resident in a particular tissue, and capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells." [CL:curator] synonym: "histiocyte" RELATED [] xref: CL:0000235 xref: ZFIN:ZDB-ANAT-060331-85 is_a: ZFA:0009064 ! mononuclear phagocyte is_a: ZFA:0009088 ! professional antigen presenting cell relationship: develops_from ZFA:0009265 ! monocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001159 ! immune system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009142 name: B cell namespace: zebrafish_anatomy def: "A type of lymphocyte whose defining characteristic is the expression of an immunoglobulin complex." [ZFIN:ZDB-PUB-070221-3] synonym: "B lymphocyte" RELATED [] synonym: "B-cell" RELATED [] synonym: "B-lymphocyte" RELATED [] xref: CL:0000236 xref: ZFIN:ZDB-ANAT-070308-110 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009349 ! pro-B cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009143 name: brush border epithelial cell namespace: zebrafish_anatomy xref: CL:0000239 xref: ZFIN:ZDB-ANAT-070308-111 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009144 name: stratified squamous epithelial cell namespace: zebrafish_anatomy xref: CL:0000240 xref: ZFIN:ZDB-ANAT-070308-112 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009145 name: stratified cuboidal epithelial cell namespace: zebrafish_anatomy xref: CL:0000241 xref: ZFIN:ZDB-ANAT-070308-113 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009146 name: Merkel cell namespace: zebrafish_anatomy def: "A modified epidermal cell located in the stratum basale. They are found mostly in areas where sensory perception is acute, such as the fingertips. Merkel cells are closely associated with an expanded terminal bulb of an afferent myelinated nerve fiber." [CL:curator] xref: CL:0000242 xref: ZFIN:ZDB-ANAT-070308-114 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009147 name: glial cell (sensu Vertebrata) namespace: zebrafish_anatomy def: "A non-neuronal cells of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Form the myelin insulation of nervous pathways, guide neuronal migration during development, and exchange metabolites with neurons. Neuroglia have high-affinity transmitter uptake systems, voltage-dependent and transmitter-gated ion channels, and can release transmitters, but their role in signaling (as in many other functions) is unclear." [CL:curator] xref: CL:0000243 xref: ZFIN:ZDB-ANAT-070308-115 is_a: ZFA:0009073 ! glial cell relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009148 name: transitional epithelial cell namespace: zebrafish_anatomy xref: CL:0000244 xref: ZFIN:ZDB-ANAT-070308-116 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009149 name: Mauthner neuron namespace: zebrafish_anatomy alt_id: ZFA:0000087 alt_id: ZFA:0000613 xref: CL:0000246 xref: ZFIN:ZDB-ANAT-010921-507 is_a: ZFA:0009051 ! interneuron relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000545 ! medulla oblongata relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: start ZFS:0000027 ! Segmentation:20-25 somites [Term] id: ZFA:0009150 name: Rohon-Beard neuron namespace: zebrafish_anatomy alt_id: ZFA:0000002 synonym: "RB neuron" RELATED [] synonym: "Rohon-Beard neurons" RELATED PLURAL [] xref: CL:0000247 xref: ZFIN:ZDB-ANAT-010921-407 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000038 ! Larval:Day 6 relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0009151 name: hatching gland cell namespace: zebrafish_anatomy xref: CL:0000249 xref: ZFIN:ZDB-ANAT-070308-117 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009152 name: extramedullary cell namespace: zebrafish_anatomy xref: CL:0000251 xref: ZFIN:ZDB-ANAT-070308-118 is_a: ZFA:0009053 ! sensory neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009153 name: eurydendroid cell namespace: zebrafish_anatomy xref: CL:0000253 xref: ZFIN:ZDB-ANAT-070308-119 is_a: ZFA:0009239 ! efferent neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009154 name: eye photoreceptor cell namespace: zebrafish_anatomy xref: CL:0000287 xref: ZFIN:ZDB-ANAT-051116-42 is_a: ZFA:0009127 ! photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000143 ! retinal photoreceptor layer relationship: part_of ZFA:0001464 ! retinal outer nuclear layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009155 name: somatotropin secreting cell namespace: zebrafish_anatomy def: "An acidophilic cell of the anterior pituitary that produces growth hormone, somatotropin." [CL:curator] synonym: "growth hormone secreting cell" RELATED [] synonym: "somatotrope" RELATED [] synonym: "somatotroph" RELATED [] synonym: "somatotrophin secreting cell" RELATED [] synonym: "somatotropic cell" RELATED [] synonym: "somatrophic cell" RELATED [] xref: CL:0000295 xref: ZFIN:ZDB-ANAT-060816-74 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009156 name: gamete namespace: zebrafish_anatomy xref: CL:0000300 xref: ZFIN:ZDB-ANAT-070308-120 is_a: ZFA:0009016 ! germ line cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009157 name: keratin accumulating cell namespace: zebrafish_anatomy xref: CL:0000311 xref: ZFIN:ZDB-ANAT-070308-121 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009158 name: keratinocyte namespace: zebrafish_anatomy def: "An epidermal cell which synthesizes keratin and undergoes a characteristic change as it move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin. Successive stages of differentiation of the keratinocytes forming the epidermal layers are basal cell, spinous or prickle cell, and the granular cell." [CL:curator] xref: CL:0000312 xref: ZFIN:ZDB-ANAT-070308-122 is_a: ZFA:0009157 ! keratin accumulating cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009159 name: mucus secreting cell namespace: zebrafish_anatomy alt_id: ZFA:0000129 synonym: "mucous cell" RELATED [] xref: CL:0000319 xref: ZFIN:ZDB-ANAT-010921-556 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0001159 ! immune system relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009160 name: seminal fluid secreting cell namespace: zebrafish_anatomy xref: CL:0000321 xref: ZFIN:ZDB-ANAT-070308-123 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009161 name: metanephric mesenchyme stem cell namespace: zebrafish_anatomy xref: CL:0000324 xref: ZFIN:ZDB-ANAT-070308-124 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009138 ! mesodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009162 name: extracellular matrix secreting cell namespace: zebrafish_anatomy xref: CL:0000327 xref: ZFIN:ZDB-ANAT-070308-125 is_a: ZFA:0009226 ! stromal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009163 name: myelin accumulating cell namespace: zebrafish_anatomy xref: CL:0000328 xref: ZFIN:ZDB-ANAT-070308-126 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009164 name: oxygen accumulating cell namespace: zebrafish_anatomy xref: CL:0000329 xref: ZFIN:ZDB-ANAT-070308-127 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009165 name: neural crest cell namespace: zebrafish_anatomy def: "A cell of the strip of specialized ectoderm flanking each side of the embryonal neural plate, which after the closure of the neural tube, forms a column of isolated cells along the dorsal aspect of the neural tube. Most of the cranial and all of the spinal sensory ganglion cells arise by differentiation of neural crest cells." [CL:curator] xref: CL:0000333 xref: ZFIN:ZDB-ANAT-050915-149 is_a: ZFA:0009136 ! motile cell relationship: develops_from ZFA:0009080 ! neurectodermal cell relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: part_of ZFA:0000045 ! neural crest relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0009166 name: mesenchyme condensation cell namespace: zebrafish_anatomy xref: CL:0000335 xref: ZFIN:ZDB-ANAT-070308-128 relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009167 name: adrenal medulla cell namespace: zebrafish_anatomy synonym: "chromafin cell" RELATED [] xref: CL:0000336 xref: ZFIN:ZDB-ANAT-070308-129 relationship: develops_from ZFA:0009004 ! trunk neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009168 name: neuroblast (sensu Vertebrata) namespace: zebrafish_anatomy synonym: "neuroblast" RELATED [] xref: CL:0000337 xref: ZFIN:ZDB-ANAT-070308-130 is_a: ZFA:0009011 ! neuroblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009169 name: glioblast (sensu Vertebrata) namespace: zebrafish_anatomy xref: CL:0000339 xref: ZFIN:ZDB-ANAT-070308-131 is_a: ZFA:0009010 ! glioblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009170 name: pigment cell (sensu Vertebrata) namespace: zebrafish_anatomy xref: CL:0000342 xref: ZFIN:ZDB-ANAT-070308-132 is_a: ZFA:0009090 ! pigment cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009171 name: visual pigment cell (sensu Vertebrata) namespace: zebrafish_anatomy xref: CL:0000343 xref: ZFIN:ZDB-ANAT-070308-133 is_a: ZFA:0009170 ! pigment cell (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009172 name: non-visual cell (sensu Vertebrata) namespace: zebrafish_anatomy xref: CL:0000344 xref: ZFIN:ZDB-ANAT-070308-134 is_a: ZFA:0009170 ! pigment cell (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009173 name: dental papilla cell namespace: zebrafish_anatomy xref: CL:0000345 xref: ZFIN:ZDB-ANAT-070308-135 relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009174 name: scleral cell namespace: zebrafish_anatomy xref: CL:0000347 xref: ZFIN:ZDB-ANAT-070308-136 relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009175 name: choroidal cell namespace: zebrafish_anatomy xref: CL:0000348 xref: ZFIN:ZDB-ANAT-070308-137 relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009176 name: extraembryonic cell namespace: zebrafish_anatomy xref: CL:0000349 xref: ZFIN:ZDB-ANAT-070308-138 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009177 name: blastoderm cell namespace: zebrafish_anatomy def: "An undifferentiated cell produced by early cleavages of the fertilized egg (zygote)." [CL:curator] synonym: "blastomere" RELATED [] xref: CL:0000353 xref: ZFIN:ZDB-ANAT-070308-139 is_a: ZFA:0009002 ! early embryonic cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009178 name: blastemal cell namespace: zebrafish_anatomy xref: CL:0000354 xref: ZFIN:ZDB-ANAT-070308-140 is_a: ZFA:0009020 ! multi fate stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009179 name: muscle stem cell namespace: zebrafish_anatomy xref: CL:0000355 xref: ZFIN:ZDB-ANAT-050915-156 is_a: ZFA:0009013 ! single fate stem cell is_a: ZFA:0009291 ! muscle precursor cell relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0009180 name: stratified epithelial stem cell namespace: zebrafish_anatomy xref: CL:0000357 xref: ZFIN:ZDB-ANAT-070308-141 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009181 name: vascular associated smooth muscle cell namespace: zebrafish_anatomy xref: CL:0000359 xref: ZFIN:ZDB-ANAT-070308-142 is_a: ZFA:0009118 ! smooth muscle cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009182 name: gastrula cell namespace: zebrafish_anatomy def: "A cell of the embryo in the early stage following the blastula, characterized by morphogenetic cell movements, cell differentiation, and the formation of the three germ layers." [CL:curator] xref: CL:0000361 xref: ZFIN:ZDB-ANAT-070308-143 is_a: ZFA:0009002 ! early embryonic cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009183 name: epidermal cell namespace: zebrafish_anatomy def: "A cell found in the outermost layer of the organism." [CL:curator] xref: CL:0000362 xref: ZFIN:ZDB-ANAT-060816-78 is_a: ZFA:0009039 ! squamous epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009184 name: osteoprogenitor cell namespace: zebrafish_anatomy xref: CL:0000375 xref: ZFIN:ZDB-ANAT-070308-144 is_a: ZFA:0009013 ! single fate stem cell relationship: develops_from ZFA:0009166 ! mesenchyme condensation cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009185 name: sensory processing neuron namespace: zebrafish_anatomy xref: CL:0000379 xref: ZFIN:ZDB-ANAT-070308-145 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009186 name: neurosecretory neuron namespace: zebrafish_anatomy xref: CL:0000381 xref: ZFIN:ZDB-ANAT-070308-146 is_a: ZFA:0009239 ! efferent neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009187 name: nephrogenic mesenchyme stem cell namespace: zebrafish_anatomy xref: CL:0000383 xref: ZFIN:ZDB-ANAT-070308-147 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009188 name: ligament cell namespace: zebrafish_anatomy xref: CL:0000384 xref: ZFIN:ZDB-ANAT-070308-148 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009189 name: tendon cell namespace: zebrafish_anatomy synonym: "muscle attachment cell" RELATED [] xref: CL:0000388 xref: ZFIN:ZDB-ANAT-070308-149 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009190 name: electrically responsive cell namespace: zebrafish_anatomy def: "A cell whose function is determined by its response to an electric signal." [CL:curator] xref: CL:0000393 xref: ZFIN:ZDB-ANAT-070308-150 is_a: ZFA:0009128 ! electrically active cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009191 name: CNS interneuron namespace: zebrafish_anatomy xref: CL:0000402 xref: ZFIN:ZDB-ANAT-070308-151 is_a: ZFA:0009051 ! interneuron is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009192 name: serotinergic neuron namespace: zebrafish_anatomy xref: CL:0000403 xref: ZFIN:ZDB-ANAT-070308-152 is_a: ZFA:0009059 ! autonomic neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009193 name: electrically signaling cell namespace: zebrafish_anatomy def: "A cell that initiates an electrical signal and passes that signal to another cell." [CL:curator] xref: CL:0000404 xref: ZFIN:ZDB-ANAT-070308-153 is_a: ZFA:0009128 ! electrically active cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009194 name: CNS short range interneuron namespace: zebrafish_anatomy xref: CL:0000406 xref: ZFIN:ZDB-ANAT-070308-154 is_a: ZFA:0009191 ! CNS interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009195 name: CNS long range interneuron namespace: zebrafish_anatomy xref: CL:0000410 xref: ZFIN:ZDB-ANAT-070308-155 is_a: ZFA:0009191 ! CNS interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009196 name: hypodermal cell namespace: zebrafish_anatomy xref: CL:0000411 xref: ZFIN:ZDB-ANAT-070308-156 is_a: ZFA:0009039 ! squamous epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009197 name: yolk cell namespace: zebrafish_anatomy xref: CL:0000428 xref: ZFIN:ZDB-ANAT-070308-157 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009198 name: xanthophore namespace: zebrafish_anatomy alt_id: ZFA:0001092 def: "A pigment cell derived from the neural crest. Contains cartenoid pigments in structures called pterinosomes or xanthosomes. This gives an appearance ranging from a golden yellow to orange and red." [CL:curator] xref: CL:0000430 xref: ZFIN:ZDB-ANAT-040708-3 is_a: ZFA:0009090 ! pigment cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0009199 name: iridophore namespace: zebrafish_anatomy alt_id: ZFA:0001090 def: "A pigment cell derived from the neural crest. The cell contains flat light-reflecting platelets, probably of guanine, in stacks called reflecting platets or iridisomes. The color-generating components produce a silver, gold, or iridescent color." [CL:curator] xref: CL:0000431 xref: ZFIN:ZDB-ANAT-040708-1 is_a: ZFA:0009090 ! pigment cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000032 ! Pharyngula:High-pec [Term] id: ZFA:0009200 name: reticular cell namespace: zebrafish_anatomy xref: CL:0000432 xref: ZFIN:ZDB-ANAT-070308-158 is_a: ZFA:0009026 ! fibroblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009201 name: alkali secreting cell namespace: zebrafish_anatomy xref: CL:0000435 xref: ZFIN:ZDB-ANAT-070308-159 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009202 name: follicle stimulating hormone secreting cell namespace: zebrafish_anatomy synonym: "delta basophil" RELATED [] synonym: "gonadotroph" RELATED [] xref: CL:0000437 xref: ZFIN:ZDB-ANAT-070308-160 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009203 name: luteinizing hormone secreting cell namespace: zebrafish_anatomy synonym: "delta basophila" RELATED [] synonym: "gonadotroph" RELATED [] xref: CL:0000438 xref: ZFIN:ZDB-ANAT-060816-75 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009204 name: prolactin secreting cell namespace: zebrafish_anatomy def: "An acidophilic cell of the anterior pituitary that produces prolactin." [CL:curator] synonym: "epsilon-acidophil" RELATED [] synonym: "lactotrope" RELATED [] synonym: "lactotroph" RELATED [] synonym: "lactotropic cell" RELATED [] synonym: "mammotrope" RELATED [] synonym: "mammotroph" RELATED [] synonym: "mammotrophic cell" RELATED [] synonym: "mammotropic cell" RELATED [] xref: CL:0000439 xref: ZFIN:ZDB-ANAT-060816-70 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009205 name: melanocyte stimulating hormone secreting cell namespace: zebrafish_anatomy def: "A cell of the intermediate pituitary that produces melanocyte stimulating hormone." [CL:curator] synonym: "melanotrope" RELATED [] synonym: "melanotroph" RELATED [] xref: CL:0000440 xref: ZFIN:ZDB-ANAT-060816-72 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009206 name: calcitonin secreting cell namespace: zebrafish_anatomy xref: CL:0000443 xref: ZFIN:ZDB-ANAT-070308-161 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009207 name: parathyroid hormone secreting cell namespace: zebrafish_anatomy synonym: "chief cell" RELATED [] xref: CL:0000446 xref: ZFIN:ZDB-ANAT-070308-162 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009208 name: lipocyte namespace: zebrafish_anatomy xref: CL:0000450 xref: ZFIN:ZDB-ANAT-070308-163 is_a: ZFA:0009082 ! fat cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009209 name: dendritic cell namespace: zebrafish_anatomy def: "A cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation." [ZFIN:ZDB-PUB-070221-3] synonym: "interdigitating cell" RELATED [] synonym: "veiled cell" RELATED [] xref: CL:0000451 xref: ZFIN:ZDB-ANAT-070308-164 is_a: ZFA:0009088 ! professional antigen presenting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009210 name: thyroid hormone secreting cell namespace: zebrafish_anatomy xref: CL:0000452 xref: ZFIN:ZDB-ANAT-070308-165 is_a: ZFA:0009096 ! endocrine cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009211 name: epinephrin secreting cell namespace: zebrafish_anatomy xref: CL:0000454 xref: ZFIN:ZDB-ANAT-070308-166 is_a: ZFA:0009212 ! biogenic amine secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009212 name: biogenic amine secreting cell namespace: zebrafish_anatomy xref: CL:0000457 xref: ZFIN:ZDB-ANAT-070308-167 is_a: ZFA:0009096 ! endocrine cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009213 name: serotin secreting cell namespace: zebrafish_anatomy xref: CL:0000458 xref: ZFIN:ZDB-ANAT-070308-168 is_a: ZFA:0009212 ! biogenic amine secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009214 name: norepinephrin secreting cell namespace: zebrafish_anatomy xref: CL:0000459 xref: ZFIN:ZDB-ANAT-070308-169 is_a: ZFA:0009212 ! biogenic amine secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009215 name: glucocorticoid secreting cell namespace: zebrafish_anatomy xref: CL:0000460 xref: ZFIN:ZDB-ANAT-070308-170 is_a: ZFA:0009106 ! steroid hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009216 name: adrenocorticotropic hormone secreting cell namespace: zebrafish_anatomy def: "A basophil cell of the anterior pituitary that produces adrenocorticotropic hormone, or corticotropin." [CL:curator] synonym: "adrenocorticotrophic hormone secreting cell" RELATED [] synonym: "corticotrope" RELATED [] synonym: "corticotroph" RELATED [] synonym: "corticotrophin hormone secreting cell" RELATED [] synonym: "corticotropin hormone secreting cell" RELATED [] xref: CL:0000467 xref: ZFIN:ZDB-ANAT-060816-71 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009217 name: digestive enzyme secreting cell namespace: zebrafish_anatomy xref: CL:0000470 xref: ZFIN:ZDB-ANAT-070308-171 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009218 name: thyroid stimulating hormone secreting cell namespace: zebrafish_anatomy def: "A basophil cell of the anterior pituitary that produces thyroid stimulating hormone, thyrotrophin." [CL:curator] synonym: "beta-basophil" RELATED [] synonym: "thyrotrope" RELATED [] synonym: "thyrotroph" RELATED [] xref: CL:0000476 xref: ZFIN:ZDB-ANAT-060816-73 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009219 name: visible light photoreceptor cell namespace: zebrafish_anatomy xref: CL:0000488 xref: ZFIN:ZDB-ANAT-070308-172 is_a: ZFA:0009127 ! photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009220 name: photopic photoreceptor cell namespace: zebrafish_anatomy xref: CL:0000490 xref: ZFIN:ZDB-ANAT-070308-173 is_a: ZFA:0009219 ! visible light photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009221 name: UV sensitive photoreceptor cell namespace: zebrafish_anatomy xref: CL:0000494 xref: ZFIN:ZDB-ANAT-070308-174 is_a: ZFA:0009127 ! photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009222 name: blue sensitive photoreceptor cell namespace: zebrafish_anatomy xref: CL:0000495 xref: ZFIN:ZDB-ANAT-070308-175 is_a: ZFA:0009220 ! photopic photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009223 name: green sensitive photoreceptor cell namespace: zebrafish_anatomy xref: CL:0000496 xref: ZFIN:ZDB-ANAT-070308-176 is_a: ZFA:0009220 ! photopic photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009224 name: red sensitive photoreceptor cell namespace: zebrafish_anatomy xref: CL:0000497 xref: ZFIN:ZDB-ANAT-070308-177 is_a: ZFA:0009220 ! photopic photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009225 name: inhibitory interneuron namespace: zebrafish_anatomy xref: CL:0000498 xref: ZFIN:ZDB-ANAT-070308-178 is_a: ZFA:0009051 ! interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009226 name: stromal cell namespace: zebrafish_anatomy def: "A connective tissue cell of an organ found in the loose connective tissue. These are most often associated with the uterine mucosa and the ovary as well as the hematopoietic system and elsewhere." [CL:curator] xref: CL:0000499 xref: ZFIN:ZDB-ANAT-070308-179 relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009227 name: granulosa cell namespace: zebrafish_anatomy def: "A supporting cell for the developing female gamete in the ovary of mammals. They develop from the coelomic epithelial cells of the gonadal ridge. Granulosa cells form a single layer around the mammalian oocyte in the primordial ovarian follicle and advance to form a multilayered cumulus oophorus surrounding the ovum in the Graafian follicle. The major functions of granulosa cells include the production of steroids and LH receptors." [CL:curator] xref: CL:0000501 xref: ZFIN:ZDB-ANAT-070308-180 is_a: ZFA:0009106 ! steroid hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009228 name: D cell namespace: zebrafish_anatomy def: "A cell found throughout the gastrointestinal tract and in the pancreas. They secrete somatostatin in both an endocrine and paracrine manner. Somatostatin inhibits gastrin, cholecystokinin, insulin, glucagon, pancreatic enzymes, and gastric hydrochloric acid. A variety of substances which inhibit gastric acid secretion (vasoactive intestinal peptide, calcitonin gene-related peptide, cholecystokinin, beta-adrenergic agonists, and gastric inhibitory peptide) are thought to act by releasing somatostatin." [CL:curator] xref: CL:0000502 xref: ZFIN:ZDB-ANAT-070308-181 is_a: ZFA:0009097 ! enteroendocrine cell is_a: ZFA:0009105 ! somatostatin secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009229 name: theca cell namespace: zebrafish_anatomy def: "A flattened stroma cell forming a sheath or theca outside the basal lamina lining the mature ovarian follicle. Thecal interstitial or stromal cells are steroidogenic, and produce primarily androgens which serve as precusors of estrogens in the granulosa cells." [CL:curator] xref: CL:0000503 xref: ZFIN:ZDB-ANAT-070308-182 is_a: ZFA:0009226 ! stromal cell is_a: ZFA:0009271 ! androgen secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009230 name: substance P secreting cell namespace: zebrafish_anatomy xref: CL:0000505 xref: ZFIN:ZDB-ANAT-070308-183 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009231 name: enkephalin secreting cell namespace: zebrafish_anatomy xref: CL:0000506 xref: ZFIN:ZDB-ANAT-070308-184 is_a: ZFA:0009232 ! endorphin secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009232 name: endorphin secreting cell namespace: zebrafish_anatomy xref: CL:0000507 xref: ZFIN:ZDB-ANAT-070308-185 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009233 name: paracrine cell namespace: zebrafish_anatomy xref: CL:0000512 xref: ZFIN:ZDB-ANAT-070308-186 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009234 name: cardiac muscle myoblast namespace: zebrafish_anatomy def: "A precursor cell destined to differentiate into cardiac myocytes." [CL:curator] synonym: "cardioblast" RELATED [] xref: CL:0000513 xref: ZFIN:ZDB-ANAT-070308-187 is_a: ZFA:0009025 ! myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009235 name: smooth muscle myoblast namespace: zebrafish_anatomy def: "A precursor cell destined to differentiate into smooth muscle myocytes." [CL:curator] synonym: "satellite cell" RELATED [] xref: CL:0000514 xref: ZFIN:ZDB-ANAT-070308-188 is_a: ZFA:0009025 ! myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009236 name: skeletal muscle myoblast namespace: zebrafish_anatomy def: "A myoblast that differentiates into skeletal muscle fibers." [CL:curator] xref: CL:0000515 xref: ZFIN:ZDB-ANAT-070308-189 is_a: ZFA:0009025 ! myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009237 name: perineuronal satellite cell namespace: zebrafish_anatomy def: "A non-neuronal cell that surrounds the neuronal cell bodies of the ganglia." [CL:curator] synonym: "perineural satellite cell" RELATED [] xref: CL:0000516 xref: ZFIN:ZDB-ANAT-070308-190 is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009238 name: afferent neuron namespace: zebrafish_anatomy def: "A neuron which conveys sensory information centrally from the periphery." [CL:curator] synonym: "input neuron" RELATED [] xref: CL:0000526 xref: ZFIN:ZDB-ANAT-070308-191 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009239 name: efferent neuron namespace: zebrafish_anatomy def: "A neuron which sends impulses peripherally to activate muscles or secretory cells." [CL:curator] synonym: "output neuron" RELATED [] xref: CL:0000527 xref: ZFIN:ZDB-ANAT-070308-192 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009240 name: nitrergic neuron namespace: zebrafish_anatomy def: "A nerve cell where transmission is mediated by nitric oxide." [CL:curator] xref: CL:0000528 xref: ZFIN:ZDB-ANAT-070308-193 is_a: ZFA:0009059 ! autonomic neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009241 name: pigmented epithelial cell namespace: zebrafish_anatomy xref: CL:0000529 xref: ZFIN:ZDB-ANAT-070308-194 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009306 ! neuroepithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009242 name: primary neuron namespace: zebrafish_anatomy alt_id: ZFA:0000055 xref: CL:0000530 xref: ZFIN:ZDB-ANAT-010921-472 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000038 ! Larval:Day 6 relationship: part_of ZFA:0001120 ! neuroectoderm relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0009243 name: CAP motoneuron namespace: zebrafish_anatomy xref: CL:0000532 xref: ZFIN:ZDB-ANAT-070308-195 is_a: ZFA:0009244 ! primary motor neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009244 name: primary motor neuron namespace: zebrafish_anatomy alt_id: ZFA:0000572 synonym: "primary motoneuron" RELATED [] xref: CL:0000533 xref: ZFIN:ZDB-ANAT-011113-498 is_a: ZFA:0009052 ! motor neuron is_a: ZFA:0009242 ! primary neuron relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0009245 name: primary interneuron namespace: zebrafish_anatomy alt_id: ZFA:0000945 xref: CL:0000534 xref: ZFIN:ZDB-ANAT-020309-308 is_a: ZFA:0009051 ! interneuron is_a: ZFA:0009242 ! primary neuron relationship: end ZFS:0000029 ! Pharyngula:Prim-5 relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009246 name: secondary neuron namespace: zebrafish_anatomy xref: CL:0000535 xref: ZFIN:ZDB-ANAT-070308-196 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009247 name: secondary motor neuron namespace: zebrafish_anatomy alt_id: ZFA:0000584 synonym: "secondary motoneuron" RELATED [] xref: CL:0000536 xref: ZFIN:ZDB-ANAT-011113-511 is_a: ZFA:0009052 ! motor neuron is_a: ZFA:0009246 ! secondary neuron relationship: end ZFS:0000043 ! Juvenile:Days 45-89 relationship: start ZFS:0000028 ! Segmentation:26+ somites [Term] id: ZFA:0009248 name: neuron namespace: zebrafish_anatomy alt_id: ZFA:0000134 def: "The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system." [CL:curator] xref: CL:0000540 xref: ZFIN:ZDB-ANAT-010921-563 is_a: ZFA:0009190 ! electrically responsive cell is_a: ZFA:0009193 ! electrically signaling cell relationship: develops_from ZFA:0009011 ! neuroblast relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000396 ! nervous system relationship: start ZFS:0000023 ! Segmentation:1-4 somites [Term] id: ZFA:0009249 name: melanoblast namespace: zebrafish_anatomy def: "A cell that originates from the neural crest and differentiates into a pigment cell." [CL:curator] xref: CL:0000541 xref: ZFIN:ZDB-ANAT-050915-150 relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000025 ! Segmentation:10-13 somites [Term] id: ZFA:0009250 name: lymphocyte namespace: zebrafish_anatomy def: "A cell of the B cell, T cell, or natural killer cell lineage." [ZFIN:ZDB-PUB-070221-3] xref: CL:0000542 xref: ZFIN:ZDB-ANAT-070308-197 is_a: ZFA:0009357 ! mononuclear cell relationship: develops_from ZFA:0009023 ! common lymphocyte progenitor relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009251 name: granulocyte monocyte progenitor cell namespace: zebrafish_anatomy def: "A progenitor cell committed to the granulocyte and monocyte lineages. http://www.copewithcytokines.de" [ZFIN:ZDB-PUB-070221-1] synonym: "CFU-C , Colony forming unit in culture" RELATED [] synonym: "CFU-GM" RELATED [ZFIN:ZDB-PUB-070221-1] synonym: "colony forming unit granulocyte macrophage" RELATED [ZFIN:ZDB-PUB-070221-1] synonym: "GMP" RELATED [ZFIN:ZDB-PUB-070221-1] synonym: "granulocyte-macrophage progenitor" RELATED [ZFIN:ZDB-PUB-070221-1] synonym: "myeloid progenitor cell" RELATED [] xref: CL:0000557 xref: ZFIN:ZDB-ANAT-060331-74 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009252 name: reticulocyte namespace: zebrafish_anatomy def: "An immature erythrocyte showing a basophilic reticulum under vital staining." [ZFIN:ZDB-PUB-070221-1] xref: CL:0000558 xref: ZFIN:ZDB-ANAT-070308-198 is_a: ZFA:0009044 ! blood cell is_a: ZFA:0009325 ! erythroid lineage cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009253 name: promonocyte namespace: zebrafish_anatomy def: "A precursor in the monocytic series, being a cell intermediate in development between the monoblast and monocyte." [ZFIN:ZDB-PUB-070221-1] xref: CL:0000559 xref: ZFIN:ZDB-ANAT-070308-199 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009017 ! monoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009254 name: band form neutrophil namespace: zebrafish_anatomy def: "A late neutrophilic metamyelocyte in which the nucleus is in the form of a curved or coiled band, not having acquired the typical multilobar shape of the mature neutrophil." [ZFIN:ZDB-PUB-070221-1] synonym: "band" RELATED [] synonym: "band cell" RELATED [] synonym: "band form" RELATED [] synonym: "rod neutrophil" RELATED [] synonym: "stab cell" RELATED [] xref: CL:0000560 xref: ZFIN:ZDB-ANAT-060331-80 is_a: ZFA:0009328 ! immature neutrophil relationship: develops_from ZFA:0009268 ! neutrophilic metamyelocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009255 name: amacrine cell namespace: zebrafish_anatomy def: "Interneuron of the vertebrate retina. They integrate, modulate, and interpose a temporal domain in the visual message presented to the retinal ganglion cells, with which they synapse in the inner plexiform layer." [CL:curator] synonym: "amacrine neuron" RELATED [] xref: CL:0000561 xref: ZFIN:ZDB-ANAT-051116-41 is_a: ZFA:0009051 ! interneuron relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009256 name: nucleate erythrocyte namespace: zebrafish_anatomy def: "An erythrocyte having a nucleus." [CL:curator] synonym: "RBC" RELATED [] synonym: "red blood cell" RELATED [] xref: CL:0000562 xref: ZFIN:ZDB-ANAT-070308-200 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009257 name: neutrophilic promyelocyte namespace: zebrafish_anatomy def: "A neutrophil precursor in the granulocytic series, being a cell intermediate in development between a myeloblast and myelocyte, and containing a few, as yet undifferentiated, cytoplasmic granules." [ZFIN:ZDB-PUB-070221-1] synonym: "neutrophilic premyelocyte" RELATED [] synonym: "neutrophilic progranulocyte" RELATED [] synonym: "promyelocyte" RELATED [] xref: CL:0000564 xref: ZFIN:ZDB-ANAT-060331-77 relationship: develops_from ZFA:0009018 ! neutrophilic myeloblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009258 name: angioblastic mesenchymal cell namespace: zebrafish_anatomy synonym: "angioblast" RELATED [] xref: CL:0000566 xref: ZFIN:ZDB-ANAT-070308-201 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009259 name: cardiac mesenchymal cell namespace: zebrafish_anatomy xref: CL:0000569 xref: ZFIN:ZDB-ANAT-070308-202 relationship: develops_from ZFA:0009004 ! trunk neural crest cell relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009260 name: parafollicular cell namespace: zebrafish_anatomy synonym: "C cell" RELATED [] xref: CL:0000570 xref: ZFIN:ZDB-ANAT-070308-203 relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009261 name: leucophore namespace: zebrafish_anatomy def: "A pigment cell derived from the neural crest. Contains uric acid or other purine crystals deposited in stacks called leucosomes. The crystals reflect light and this gives a white appearance under white light." [CL:curator] xref: CL:0000571 xref: ZFIN:ZDB-ANAT-070308-204 is_a: ZFA:0009090 ! pigment cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009262 name: retinal cone cell namespace: zebrafish_anatomy def: "One of the two photoreceptor cell types in the vertebrate retina. In cones the photopigment is in invaginations of the cell membrane of the outer segment. Cones are less sensitive to light than rods, but they provide vision with higher spatial and temporal acuity, and the combination of signals from cones with different pigments allows color vision." [CL:curator] xref: CL:0000573 xref: ZFIN:ZDB-ANAT-051116-43 is_a: ZFA:0009154 ! eye photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009263 name: erythrophore namespace: zebrafish_anatomy def: "A pigment cell derived from the neural crest. Contains pteridine and/or carotenoid pigments in structures called pterinosomes or erythrosomes. This gives an orange to red appearance." [CL:curator] xref: CL:0000574 xref: ZFIN:ZDB-ANAT-070308-205 is_a: ZFA:0009090 ! pigment cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009264 name: corneal epithelial cell namespace: zebrafish_anatomy xref: CL:0000575 xref: ZFIN:ZDB-ANAT-070308-206 is_a: ZFA:0009039 ! squamous epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009265 name: monocyte namespace: zebrafish_anatomy def: "Large, phagocytic mononuclear leukocytes produced in the vertebrate bone marrow and released into the blood." [CL:curator] xref: CL:0000576 xref: ZFIN:ZDB-ANAT-070308-207 is_a: ZFA:0009064 ! mononuclear phagocyte is_a: ZFA:0009088 ! professional antigen presenting cell relationship: develops_from ZFA:0009253 ! promonocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009266 name: neutrophilic myelocyte namespace: zebrafish_anatomy def: "A neutrophil precursor in the granulocytic series, being a cell intermediate in development between a promyelocyte and a metamyelocyte; in this stage, differentiation of cytoplasmic granules has begun." [ZFIN:ZDB-PUB-070221-1] xref: CL:0000580 xref: ZFIN:ZDB-ANAT-060331-78 is_a: ZFA:0009328 ! immature neutrophil relationship: develops_from ZFA:0009257 ! neutrophilic promyelocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009267 name: peritoneal macrophage namespace: zebrafish_anatomy def: "A mononuclear phagocyte that develops from bone marrow precursors but is resident in the peritoneum." [CL:curator] xref: CL:0000581 xref: ZFIN:ZDB-ANAT-070308-208 is_a: ZFA:0009141 ! macrophage relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009268 name: neutrophilic metamyelocyte namespace: zebrafish_anatomy def: "A neutrophil precursor in the granulocytic series, being a cell intermediate in development between a meylocyte and the band form neutrophil. The protein synthesis seen in earlier stages decreases or stops; the nucleus becomes indented and its chromatin becomes coarse and clumped; and the cytoplasm becomes pink like that of a mature granulocyte." [ZFIN:ZDB-PUB-070221-1] synonym: "juvenile neutrophil" RELATED [] synonym: "metamyelocyte" RELATED [] xref: CL:0000582 xref: ZFIN:ZDB-ANAT-060331-79 is_a: ZFA:0009328 ! immature neutrophil relationship: develops_from ZFA:0009266 ! neutrophilic myelocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009269 name: enterocyte namespace: zebrafish_anatomy xref: CL:0000584 xref: ZFIN:ZDB-ANAT-070308-209 is_a: ZFA:0009143 ! brush border epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009270 name: odontoclast namespace: zebrafish_anatomy def: "A specialized phagocytic cell associated with the absorption and removal of cementum." [CL:curator] xref: CL:0000588 xref: ZFIN:ZDB-ANAT-070308-210 is_a: ZFA:0009047 ! osteoclast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009271 name: androgen secreting cell namespace: zebrafish_anatomy xref: CL:0000593 xref: ZFIN:ZDB-ANAT-070308-211 is_a: ZFA:0009106 ! steroid hormone secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009272 name: skeletal muscle satellite cell namespace: zebrafish_anatomy def: "An elongated, spindle-shaped, quiescent myoblast lying in close contact with adult skeletal muscle. They are thought to play a role in muscle repair and regeneration." [CL:curator] xref: CL:0000594 xref: ZFIN:ZDB-ANAT-070308-212 is_a: ZFA:0009236 ! skeletal muscle myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009273 name: pyramidal cell namespace: zebrafish_anatomy def: "A projection neuron in the cerebral cortex and the hippocampus. Pyramidal cells have a pyramid-shaped soma with the apex and an apical dendrite pointed toward the pial surface and other dendrites and an axon emerging from the base. The axons may have local collaterals but also project outside their cortical region." [CL:curator] xref: CL:0000598 xref: ZFIN:ZDB-ANAT-070308-213 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009274 name: pressoreceptor cell namespace: zebrafish_anatomy def: "A receptor in the vascular system, particularly the aorta and carotid sinus, which is sensitive to stretch of the vessel walls." [CL:curator] xref: CL:0000602 xref: ZFIN:ZDB-ANAT-070308-214 is_a: ZFA:0009370 ! stretch receptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009275 name: retinal rod cell namespace: zebrafish_anatomy def: "One of the two photoreceptor cell types of the vertebrate retina. In rods the photopigment is in stacks of membranous disks separate from the outer cell membrane. Rods are more sensitive to light than cones, but rod mediated vision has less spatial and temporal resolution than cone vision." [CL:curator] xref: CL:0000604 xref: ZFIN:ZDB-ANAT-051116-44 is_a: ZFA:0009154 ! eye photoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009276 name: GABAergic neuron namespace: zebrafish_anatomy xref: CL:0000617 xref: ZFIN:ZDB-ANAT-070308-215 is_a: ZFA:0009059 ! autonomic neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009277 name: acinar cell namespace: zebrafish_anatomy xref: CL:0000622 xref: ZFIN:ZDB-ANAT-070308-216 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009278 name: natural killer cell namespace: zebrafish_anatomy def: "A natural killer cell is a lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells." [ZFIN:ZDB-PUB-070221-3] synonym: "large granular lymphocyte" RELATED [] synonym: "NK cell" RELATED [] synonym: "null cell" RELATED [] xref: CL:0000623 xref: ZFIN:ZDB-ANAT-070308-217 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009348 ! natural killer cell progenitor relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009279 name: ito cell namespace: zebrafish_anatomy synonym: "perisinusoidal cell" RELATED [] xref: CL:0000632 xref: ZFIN:ZDB-ANAT-070308-218 is_a: ZFA:0009162 ! extracellular matrix secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009280 name: Muller cell namespace: zebrafish_anatomy xref: CL:0000636 xref: ZFIN:ZDB-ANAT-050915-161 is_a: ZFA:0009075 ! astrocyte relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009281 name: folliculostellate cell namespace: zebrafish_anatomy def: "A supportive cell of the vertebrate pituitary that provides macromolecular transport and secretes hormones." [CL:curator] xref: CL:0000642 xref: ZFIN:ZDB-ANAT-070308-219 is_a: ZFA:0009096 ! endocrine cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009282 name: Bergmann glial cell namespace: zebrafish_anatomy xref: CL:0000644 xref: ZFIN:ZDB-ANAT-070308-220 is_a: ZFA:0009075 ! astrocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009283 name: mesangial cell namespace: zebrafish_anatomy xref: CL:0000650 xref: ZFIN:ZDB-ANAT-070308-221 relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009284 name: pinealocyte namespace: zebrafish_anatomy xref: CL:0000652 xref: ZFIN:ZDB-ANAT-070308-222 is_a: ZFA:0009096 ! endocrine cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009285 name: podocyte namespace: zebrafish_anatomy xref: CL:0000653 xref: ZFIN:ZDB-ANAT-070308-223 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000037 ! Larval:Day 5 relationship: part_of ZFA:0001557 ! pronephric glomerulus relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009286 name: fenestrated cell namespace: zebrafish_anatomy synonym: "window cell" RELATED [] xref: CL:0000666 xref: ZFIN:ZDB-ANAT-070308-224 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009287 name: collagen secreting cell namespace: zebrafish_anatomy xref: CL:0000667 xref: ZFIN:ZDB-ANAT-070308-225 is_a: ZFA:0009162 ! extracellular matrix secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009288 name: primordial germ cell namespace: zebrafish_anatomy alt_id: ZFA:0000065 xref: CL:0000670 xref: ZFIN:ZDB-ANAT-010921-483 is_a: ZFA:0009016 ! germ line cell is_a: ZFA:0009136 ! motile cell relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000632 ! reproductive system relationship: start ZFS:0000014 ! Blastula:Sphere [Term] id: ZFA:0009289 name: gut absorptive cell namespace: zebrafish_anatomy def: "Cell of the intestinal epithelium with a brush border made up of many parallel packed microvilli; associated with absorption, particularly of macromolecules." [CL:curator] xref: CL:0000677 xref: ZFIN:ZDB-ANAT-070308-226 is_a: ZFA:0009129 ! absorptive cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009290 name: glutamatergic neuron namespace: zebrafish_anatomy xref: CL:0000679 xref: ZFIN:ZDB-ANAT-070308-227 is_a: ZFA:0009059 ! autonomic neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009291 name: muscle precursor cell namespace: zebrafish_anatomy xref: CL:0000680 xref: ZFIN:ZDB-ANAT-050915-155 relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0009138 ! mesodermal cell relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000020 ! Gastrula:75%-epiboly [Term] id: ZFA:0009292 name: radial glial cell namespace: zebrafish_anatomy def: "A transient cell present only in the developing CNS. Functions as both a precursor cell and as a scaffold to support neuronal migration." [CL:curator] xref: CL:0000681 xref: ZFIN:ZDB-ANAT-050915-162 is_a: ZFA:0009168 ! neuroblast (sensu Vertebrata) relationship: develops_from ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0009306 ! neuroepithelial cell relationship: end ZFS:0000000 ! Unknown relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0009293 name: M cell namespace: zebrafish_anatomy def: "An absorptive cell of the mammalian gut epithelium that endocytoses microorganisms and intact macromolecules from the gut lumen and transports them to the subepithelial space where they are presented to antigen-presenting cells and lymphocytes." [CL:curator] xref: CL:0000682 xref: ZFIN:ZDB-ANAT-070308-228 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009294 name: ependymoglial cell namespace: zebrafish_anatomy def: "A cell that transports hormones from neurosecretory cells." [CL:curator] xref: CL:0000683 xref: ZFIN:ZDB-ANAT-070308-229 is_a: ZFA:0009075 ! astrocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009295 name: cerebrospinal fluid secreting cell namespace: zebrafish_anatomy xref: CL:0000686 xref: ZFIN:ZDB-ANAT-070308-230 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009165 ! neural crest cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009296 name: perijunctional fibroblast namespace: zebrafish_anatomy def: "A fibroblast-like cell that provides support at neuromuscular junctions in vertebrates and are localized outside the synaptic basal lamina." [CL:curator] xref: CL:0000688 xref: ZFIN:ZDB-ANAT-070308-231 is_a: ZFA:0009026 ! fibroblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009297 name: stellate interneuron namespace: zebrafish_anatomy xref: CL:0000691 xref: ZFIN:ZDB-ANAT-070308-232 is_a: ZFA:0009051 ! interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009298 name: terminal Schwann cell namespace: zebrafish_anatomy def: "A neuroglial cell of the peripheral nervous system inside the basal lamina of the neuromuscular junction providing chemical and physical support to the synapse." [CL:curator] xref: CL:0000692 xref: ZFIN:ZDB-ANAT-070308-233 relationship: develops_from ZFA:0009073 ! glial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009299 name: neuroglioform cell namespace: zebrafish_anatomy def: "A stellate interneuron having 7-10 dendrites that may branch." [CL:curator] synonym: "spiderweb cell" RELATED [] xref: CL:0000693 xref: ZFIN:ZDB-ANAT-070308-234 is_a: ZFA:0009297 ! stellate interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009300 name: Cajal-Retzius cell namespace: zebrafish_anatomy def: "One of a transient population of pioneering neurons in the cerebral cortex. These cells are slender bipolar cells of the developing marginal zone. One feature of these cells in mammals is that they express the Reelin gene." [CL:curator] xref: CL:0000695 xref: ZFIN:ZDB-ANAT-070308-235 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009301 name: dopaminergic neuron namespace: zebrafish_anatomy def: "A neuron that releases dopamine as a neurotransmitter." [CL:curator] xref: CL:0000700 xref: ZFIN:ZDB-ANAT-060816-77 is_a: ZFA:0009059 ! autonomic neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009302 name: sustentacular cell namespace: zebrafish_anatomy def: "Cell that provides some or all mechanical, nutritional and phagocytic support to their neighbors." [CL:curator] xref: CL:0000703 xref: ZFIN:ZDB-ANAT-070308-236 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009303 name: endothelial tip cell namespace: zebrafish_anatomy def: "A specialized endothelial cell that senses extracellular signals and guides the directed growth of blood vessels." [CL:curator] xref: CL:0000704 xref: ZFIN:ZDB-ANAT-070308-237 is_a: ZFA:0009036 ! blood vessel endothelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009304 name: choroid plexus epithelial cell namespace: zebrafish_anatomy def: "Specialized ependymal cell that produces the cerebrospinal fluid from the blood and secretes it into the lumen of the brain and spinal chord." [CL:curator] xref: CL:0000706 xref: ZFIN:ZDB-ANAT-070308-238 is_a: ZFA:0009033 ! ependymal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009305 name: leptomemingeal cell namespace: zebrafish_anatomy def: "Stromal cell that forms the internal covering of the vertebrate brain and produces ECM for this and the choroid plexus." [CL:curator] xref: CL:0000708 xref: ZFIN:ZDB-ANAT-070308-239 is_a: ZFA:0009162 ! extracellular matrix secreting cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009306 name: neuroepithelial cell namespace: zebrafish_anatomy xref: CL:0000710 xref: ZFIN:ZDB-ANAT-070308-240 relationship: develops_from ZFA:0009080 ! neurectodermal cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009307 name: somatic stem cell namespace: zebrafish_anatomy xref: CL:0000723 xref: ZFIN:ZDB-ANAT-070308-241 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009308 name: urothelial cell namespace: zebrafish_anatomy def: "A cell of a layer of transitional epithelium in the wall of the bladder, ureter, and renal pelvis, external to the lamina propria." [CL:curator] xref: CL:0000731 xref: ZFIN:ZDB-ANAT-070308-242 is_a: ZFA:0009034 ! epithelial cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009309 name: leukocyte namespace: zebrafish_anatomy def: "A nucleated cell of the myeloid or lymphoid lineages, found in blood or other tissue." [CL:curator] synonym: "immune cell" RELATED [] synonym: "leucocyte" RELATED [] synonym: "white blood cell" RELATED [] xref: CL:0000738 xref: ZFIN:ZDB-ANAT-070308-243 is_a: ZFA:0009043 ! circulating cell is_a: ZFA:0009136 ! motile cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009310 name: retinal ganglion cell namespace: zebrafish_anatomy def: "The set of neurons that receives neural inputs via bipolar, horizontal and amacrine cells. The axons of these cells make up the optic nerve." [CL:curator] synonym: "gangliocyte" RELATED [] synonym: "RGC" RELATED [] xref: CL:0000740 xref: ZFIN:ZDB-ANAT-051116-46 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000024 ! retinal ganglion cell layer relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009311 name: spinal accessory motor neuron namespace: zebrafish_anatomy def: "A motor neuron that is located in the cervical region of the spinal cord and selectively innervates the sternocleidmastoid or trapezius muscle. Unlike other motor neurons, they extend axons dorsally along lateral margins of the spinal cord." [CL:curator] synonym: "SACMN" RELATED [] xref: CL:0000741 xref: ZFIN:ZDB-ANAT-070308-244 is_a: ZFA:0009052 ! motor neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009312 name: periarticular chondrocyte namespace: zebrafish_anatomy def: "A round chondrocyte that first differentiates in the late embryonic growth plate of bone." [CL:curator] xref: CL:0000742 xref: ZFIN:ZDB-ANAT-070308-245 is_a: ZFA:0009084 ! chondrocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009313 name: hypertrophic chondrocyte namespace: zebrafish_anatomy def: "A terminally differentiated chondrocyte that differentiates in the late embryonic growth plate of bone." [CL:curator] xref: CL:0000743 xref: ZFIN:ZDB-ANAT-070308-246 is_a: ZFA:0009084 ! chondrocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009314 name: columnar chondrocyte namespace: zebrafish_anatomy def: "A columnar chondrocyte that differentiates in the late embryonic growth plate of bone. Columnar chondrocytes vigorously proliferate and form columns in the growth plate." [CL:curator] xref: CL:0000744 xref: ZFIN:ZDB-ANAT-070308-247 is_a: ZFA:0009084 ! chondrocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009315 name: horizontal cell namespace: zebrafish_anatomy def: "A neuron that laterally connects other neurons in the inner nuclear layer of the retina." [ZFIN:ZDB-PUB-070221-6] xref: CL:0000745 xref: ZFIN:ZDB-ANAT-070308-248 is_a: ZFA:0009051 ! interneuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009316 name: cardiac muscle cell namespace: zebrafish_anatomy xref: CL:0000746 xref: ZFIN:ZDB-ANAT-070308-249 is_a: ZFA:0009114 ! muscle cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009317 name: cyanophore namespace: zebrafish_anatomy def: "A pigment cell derived from the neural crest. Contains blue pigment of unknown chemical composition in fibrous organelles termed cyanosomes. This gives a blue appearance." [CL:curator] synonym: "blue chromatophore" RELATED [] xref: CL:0000747 xref: ZFIN:ZDB-ANAT-070308-250 is_a: ZFA:0009090 ! pigment cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009318 name: retinal bipolar neuron namespace: zebrafish_anatomy def: "A bipolar neuron found in the retina and having connections with photoreceptors cells and neurons in the inner plexiform layer." [CL:curator] xref: CL:0000748 xref: ZFIN:ZDB-ANAT-070308-251 is_a: ZFA:0009055 ! bipolar neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009319 name: ON-bipolar cell namespace: zebrafish_anatomy def: "A bipolar neuron found in the retina and having connections with photoreceptors cells and neurons in the inner half of the inner plexiform layer. These cells depolarize in response to light stimulation of their corresponding photoreceptors." [CL:curator] xref: CL:0000749 xref: ZFIN:ZDB-ANAT-070308-252 is_a: ZFA:0009318 ! retinal bipolar neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009320 name: OFF-bipolar cell namespace: zebrafish_anatomy def: "A bipolar neuron found in the retina and having connections with photoreceptors cells and neurons in the outer half of the inner plexiform layer. These cells hyperpolarize in response to light stimulation of their corresponding photoreceptors." [CL:curator] xref: CL:0000750 xref: ZFIN:ZDB-ANAT-070308-253 is_a: ZFA:0009318 ! retinal bipolar neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009321 name: rod bipolar cell namespace: zebrafish_anatomy def: "A bipolar neuron found in the retina and having connections with rod photoreceptor cells and neurons in the inner plexiform layer." [CL:curator] xref: CL:0000751 xref: ZFIN:ZDB-ANAT-070308-254 is_a: ZFA:0009318 ! retinal bipolar neuron is_a: ZFA:0009319 ! ON-bipolar cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009322 name: cone retinal bipolar cell namespace: zebrafish_anatomy def: "A bipolar neuron found in the retina and having connections with cone photoreceptor cells and neurons in the inner plexiform layer." [CL:curator] xref: CL:0000752 xref: ZFIN:ZDB-ANAT-070308-255 is_a: ZFA:0009318 ! retinal bipolar neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009323 name: thrombocyte namespace: zebrafish_anatomy def: "A nucleated blood cell involved in coagulation, typically seen in birds and other non-mammalian vertebrates." [CL:curator] comment: Note that this is a non-mammalian cell type. Use platelet ; CL:0000233 for thrombocytes (platelets) in mammals. xref: CL:0000762 xref: ZFIN:ZDB-ANAT-070308-256 is_a: ZFA:0009044 ! blood cell is_a: ZFA:0009324 ! myeloid cell relationship: develops_from ZFA:0009351 ! thromboblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009324 name: myeloid cell namespace: zebrafish_anatomy def: "A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage." [CL:curator] xref: CL:0000763 xref: ZFIN:ZDB-ANAT-070308-257 is_a: ZFA:0009043 ! circulating cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009325 name: erythroid lineage cell namespace: zebrafish_anatomy def: "A immature or mature cell in the lineage leading to and including erythrocytes." [CL:curator] xref: CL:0000764 xref: ZFIN:ZDB-ANAT-070308-258 is_a: ZFA:0009324 ! myeloid cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009326 name: myeloid leukocyte namespace: zebrafish_anatomy def: "A cell of the monocyte, granulocyte, or mast cell lineage." [CL:curator] xref: CL:0000766 xref: ZFIN:ZDB-ANAT-070308-259 is_a: ZFA:0009309 ! leukocyte is_a: ZFA:0009324 ! myeloid cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009327 name: neutrophil namespace: zebrafish_anatomy def: "Any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes." [ZFIN:ZDB-PUB-070221-1] synonym: "neutrocyte" RELATED [] synonym: "neutrophil leucocyte" RELATED [] synonym: "neutrophil leukocyte" RELATED [] synonym: "neutrophilic leucocyte" RELATED [] synonym: "neutrophilic leukocyte" RELATED [] synonym: "PMN" RELATED [] synonym: "poly" RELATED [] synonym: "polymorphonuclear leucocyte" RELATED [] synonym: "polymorphonuclear leukocyte" RELATED [] synonym: "polymorphonuclear neutrophil" RELATED [] synonym: "polynuclear neutrophilic leucocyte" RELATED [] synonym: "polynuclear neutrophilic leukocyte" RELATED [] xref: CL:0000775 xref: ZFIN:ZDB-ANAT-070308-260 is_a: ZFA:0009048 ! granulocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009328 name: immature neutrophil namespace: zebrafish_anatomy def: "Any of the immature forms of a neutrophil in which neutrophilic specific granules are present but other phenotypic features of the mature form may be lacking. A neutrophil is a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes." [ZFIN:ZDB-PUB-070221-1] synonym: "immatuer neutrophilic leukocyte" RELATED [] synonym: "immature neutrocyte" RELATED [] synonym: "immature neutrophil leucocyte" RELATED [] synonym: "immature neutrophil leukocyte" RELATED [] synonym: "immature neutrophilic leucocyte" RELATED [] xref: CL:0000776 xref: ZFIN:ZDB-ANAT-070308-261 is_a: ZFA:0009327 ! neutrophil relationship: develops_from ZFA:0009257 ! neutrophilic promyelocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009329 name: mononuclear osteoclast namespace: zebrafish_anatomy def: "A specialized mononuclear phagocytic cell associated with the absorption and removal of bone." [CL:curator] xref: CL:0000778 xref: ZFIN:ZDB-ANAT-070308-262 is_a: ZFA:0009047 ! osteoclast is_a: ZFA:0009064 ! mononuclear phagocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009330 name: mononuclear odontoclast namespace: zebrafish_anatomy def: "A specialized multinuclear phagocytic cell associated with the absorption and removal of cementum." [CL:curator] xref: CL:0000781 xref: ZFIN:ZDB-ANAT-070308-263 is_a: ZFA:0009270 ! odontoclast is_a: ZFA:0009329 ! mononuclear osteoclast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009331 name: mature B cell namespace: zebrafish_anatomy def: "A mature form of a B cell, a type of lymphocyte whose defining characteristic is the expression of an immunoglobulin complex." [ZFIN:ZDB-PUB-070221-3] synonym: "mature B lymphocyte" RELATED [] synonym: "mature B-cell" RELATED [] synonym: "mature B-lymphocyte" RELATED [] xref: CL:0000785 xref: ZFIN:ZDB-ANAT-070308-264 is_a: ZFA:0009088 ! professional antigen presenting cell is_a: ZFA:0009142 ! B cell relationship: develops_from ZFA:0009343 ! immature B cell relationship: develops_from ZFA:0009345 ! transitional stage B cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009332 name: plasma cell namespace: zebrafish_anatomy def: "A terminally differentiated, post-mitotic, short-lived cell of the B cell lineage devoted to producing large amounts of immunoglobulin. Plasma cells are oval or round with extensive rough endoplasmic reticulum, a well-developed Golgi apparatus, and a round nucleus having a characteristic cartwheel heterochromatin pattern." [ZFIN:ZDB-PUB-070221-1, ZFIN:ZDB-PUB-070221-3] synonym: "plasmacyte" RELATED [] xref: CL:0000786 xref: ZFIN:ZDB-ANAT-070308-265 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009331 ! mature B cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009333 name: memory B cell namespace: zebrafish_anatomy def: "A distinctly differentiated long-lived B cell that is readily activated upon reencounter of its antigenic determinant. Memory B cells differentiate from antigen-activated B cells which have been selected for expression of higher affinity immunoglobulin." [ZFIN:ZDB-PUB-070221-3] synonym: "memory B lymphocyte" RELATED [] synonym: "memory B-cell" RELATED [] synonym: "memory B-lymphocyte" RELATED [] xref: CL:0000787 xref: ZFIN:ZDB-ANAT-070308-266 is_a: ZFA:0009142 ! B cell relationship: develops_from ZFA:0009331 ! mature B cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009334 name: naive B cell namespace: zebrafish_anatomy def: "A mature B cell which has not yet been activated by antigen." [CL:curator] synonym: "naive B lymphocyte" RELATED [] synonym: "nave B-cell" RELATED [] synonym: "nave B-lymphocyte" RELATED [] xref: CL:0000788 xref: ZFIN:ZDB-ANAT-070308-267 is_a: ZFA:0009331 ! mature B cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009335 name: alpha-beta T cell namespace: zebrafish_anatomy def: "An immature or mature T cell expressing an alpha-beta T cell receptor complex." [ZFIN:ZDB-PUB-070221-3] synonym: "alpha-beta T lymphocyte" RELATED [] synonym: "alpha-beta T-cell" RELATED [] synonym: "alpha-beta T-lymphocyte" RELATED [] xref: CL:0000789 xref: ZFIN:ZDB-ANAT-070308-268 is_a: ZFA:0009046 ! T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009336 name: gamma-delta T cell namespace: zebrafish_anatomy def: "An immature or mature T cell expressing an gamma-delta T cell receptor complex." [ZFIN:ZDB-PUB-070221-3] comment: Note that gamma-delta T cell have both thymic and extrathymic differentiation pathways. synonym: "gamma-delta T lymphocyte" RELATED [] synonym: "gamma-delta T-cell" RELATED [] synonym: "gamma-delta T-lymphocyte" RELATED [] xref: CL:0000798 xref: ZFIN:ZDB-ANAT-070308-269 is_a: ZFA:0009046 ! T cell relationship: develops_from ZFA:0009350 ! pro-T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009337 name: immature gamma-delta T cell namespace: zebrafish_anatomy def: "An immature T cell expressing an gamma-delta T cell receptor complex." [ZFIN:ZDB-PUB-070221-3] comment: Note that gamma-delta T cell have both thymic and extrathymic differentiation pathways. synonym: "immature gamma-delta T lymphocyte" RELATED [] synonym: "immature gamma-delta T-cell" RELATED [] synonym: "immature gamma-delta T-lymphocyte" RELATED [] xref: CL:0000799 xref: ZFIN:ZDB-ANAT-070308-270 is_a: ZFA:0009336 ! gamma-delta T cell is_a: ZFA:0009340 ! immature T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009338 name: mature gamma-delta T cell namespace: zebrafish_anatomy def: "A mature T cell expressing an gamma-delta T cell receptor complex." [ZFIN:ZDB-PUB-070221-3] synonym: "mature gamma-delta T lymphocyte" RELATED [] synonym: "mature gamma-delta T-cell" RELATED [] synonym: "mature gamma-delta T-lymphocyte" RELATED [] xref: CL:0000800 xref: ZFIN:ZDB-ANAT-070308-271 is_a: ZFA:0009336 ! gamma-delta T cell is_a: ZFA:0009341 ! mature T cell relationship: develops_from ZFA:0009337 ! immature gamma-delta T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009339 name: gamma-delta intraepithelial T cell namespace: zebrafish_anatomy def: "A gamma-delta T cell of the columnar epithelium of the gastrointestinal tract. Intraepithelial T cells often have distinct developmental pathways and activation requirements." [ZFIN:ZDB-PUB-070221-3] synonym: "gamma-delta intraepithelial T lymphocyte" RELATED [] synonym: "gamma-delta intraepithelial T-cell" RELATED [] synonym: "gamma-delta intraepithelial T-lymphocyte" RELATED [] synonym: "IEL" RELATED [] synonym: "intraepithelial lymphocyte" RELATED [] xref: CL:0000801 xref: ZFIN:ZDB-ANAT-070308-272 is_a: ZFA:0009338 ! mature gamma-delta T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009340 name: immature T cell namespace: zebrafish_anatomy def: "An immature form of a T cell, a type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex." [ZFIN:ZDB-PUB-070221-3] synonym: "immature T lymphocyte" RELATED [] synonym: "immature T-cell" RELATED [] synonym: "immature T-lymphocyte" RELATED [] xref: CL:0000804 xref: ZFIN:ZDB-ANAT-070308-273 is_a: ZFA:0009046 ! T cell relationship: develops_from ZFA:0009350 ! pro-T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009341 name: mature T cell namespace: zebrafish_anatomy def: "A mature form of a T cell, a type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex." [ZFIN:ZDB-PUB-070221-3] synonym: "mature T lymphocyte" RELATED [] synonym: "mature T-cell" RELATED [] synonym: "mature T-lymphocyte" RELATED [] xref: CL:0000812 xref: ZFIN:ZDB-ANAT-070308-274 is_a: ZFA:0009046 ! T cell relationship: develops_from ZFA:0009340 ! immature T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009342 name: memory T cell namespace: zebrafish_anatomy def: "A distinctly differentiated long-lived T cell that is readily activated upon reencounter of its antigenic determinant." [ZFIN:ZDB-PUB-070221-3] synonym: "memory T lymphocyte" RELATED [] synonym: "memory T-cell" RELATED [] synonym: "memory T-lymphocyte" RELATED [] xref: CL:0000813 xref: ZFIN:ZDB-ANAT-070308-275 is_a: ZFA:0009046 ! T cell relationship: develops_from ZFA:0009341 ! mature T cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009343 name: immature B cell namespace: zebrafish_anatomy def: "A immature form of a B cell, a type of lymphocyte whose defining characteristic is the expression of an immunoglobulin complex." [ZFIN:ZDB-PUB-070221-3] synonym: "immature B lymphocyte" RELATED [] synonym: "immature B-cell" RELATED [] synonym: "immature B-lymphocyte" RELATED [] xref: CL:0000816 xref: ZFIN:ZDB-ANAT-070308-276 is_a: ZFA:0009142 ! B cell relationship: develops_from ZFA:0009349 ! pro-B cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009344 name: pre-B cell namespace: zebrafish_anatomy def: "A fully committed immature B cell that expresses the pre-B cell receptor." [ZFIN:ZDB-PUB-070221-3] synonym: "pre-B lymphocyte" RELATED [] xref: CL:0000817 xref: ZFIN:ZDB-ANAT-070308-277 is_a: ZFA:0009343 ! immature B cell relationship: develops_from ZFA:0009349 ! pro-B cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009345 name: transitional stage B cell namespace: zebrafish_anatomy def: "An immature B cell of an intermediate stage between the pre-B cell stage and the mature nave stage. Transitional B cells express surface immunoglobulin, and are subject to the process of B cell selection." [ZFIN:ZDB-PUB-070221-3] synonym: "T1 B cell" RELATED [] synonym: "T2 B cell" RELATED [] synonym: "T3 B cell" RELATED [] synonym: "transitional stage B lymphocyte" RELATED [] synonym: "transitional stage B-cell" RELATED [] synonym: "transitional stage B-lymphocyte" RELATED [] xref: CL:0000818 xref: ZFIN:ZDB-ANAT-070308-278 is_a: ZFA:0009343 ! immature B cell relationship: develops_from ZFA:0009344 ! pre-B cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009346 name: immature natural killer cell namespace: zebrafish_anatomy def: "An immature form of a natural killer cell, a lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells. Immature natural killer cells have begun to express the characteristic natural killer cell activation and inhibitory molecules through a selection process leading to tolerance to normal self cells." [ZFIN:ZDB-PUB-070221-3] synonym: "p-NK" RELATED [] xref: CL:0000823 xref: ZFIN:ZDB-ANAT-070308-279 is_a: ZFA:0009278 ! natural killer cell relationship: develops_from ZFA:0009348 ! natural killer cell progenitor relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009347 name: mature natural killer cell namespace: zebrafish_anatomy def: "A mature form of a natural killer cell, a lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells." [ZFIN:ZDB-PUB-070221-3] synonym: "LAK cell" RELATED [] synonym: "lymphokine activated killer cell" RELATED [] xref: CL:0000824 xref: ZFIN:ZDB-ANAT-070308-280 is_a: ZFA:0009278 ! natural killer cell relationship: develops_from ZFA:0009346 ! immature natural killer cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009348 name: natural killer cell progenitor namespace: zebrafish_anatomy def: "A progenitor committed to the natural killer cell lineage, expressing certain phenotypic markers of the natural killer cell lineage such as the IL-15 receptor, but lacking many of the phenotypic characteristics of later stages of natural killer cell development such as expression of NK activating and inhibitory molecules." [CL:curator] synonym: "NKP" RELATED [] synonym: "null cell" RELATED [] synonym: "preNK cell" RELATED [] xref: CL:0000825 xref: ZFIN:ZDB-ANAT-070308-281 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphocyte progenitor relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009349 name: pro-B cell namespace: zebrafish_anatomy def: "A progenitor cell of the B cell lineage, with some lineage specific activity such as early stages of recombination of B cell receptor genes, but not yet fully committed to the B cell lineage until the expression of PAX5 occurs." [ZFIN:ZDB-PUB-070221-3] synonym: "pro-B lymphocyte" RELATED [] xref: CL:0000826 xref: ZFIN:ZDB-ANAT-070308-282 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphocyte progenitor relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009350 name: pro-T cell namespace: zebrafish_anatomy def: "A progenitor cell of the T cell lineage, with some lineage specific marker expression, but not yet fully committed to the T cell lineage." [ZFIN:ZDB-PUB-070221-3] synonym: "DN1 cell" RELATED [] synonym: "DN1 thymocyte" RELATED [] synonym: "pro-T lymphocyte" RELATED [] synonym: "T lymphoblast" RELATED [] synonym: "TN1 cell" RELATED [] xref: CL:0000827 xref: ZFIN:ZDB-ANAT-050915-144 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphocyte progenitor relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0001078 ! thymus relationship: start ZFS:0000035 ! Larval:Protruding-mouth [Term] id: ZFA:0009351 name: thromboblast namespace: zebrafish_anatomy def: "A progenitor cell of the thrombocyte, a nucleated blood cell involved in coagulation typically seen in birds and other non-mammalian vertebrates." [CL:curator] comment: Note that this is a non-mammalian cell type. xref: CL:0000828 xref: ZFIN:ZDB-ANAT-070308-283 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009022 ! megakaryocyte erythroid progenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009352 name: neutrophil progenitor cell namespace: zebrafish_anatomy def: "A progenitor cell of the neutrophil lineage." [ZFIN:ZDB-PUB-070221-1] synonym: "neutrophil stem cell" RELATED [] xref: CL:0000834 xref: ZFIN:ZDB-ANAT-070308-284 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009251 ! granulocyte monocyte progenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009353 name: myeloblast namespace: zebrafish_anatomy def: "The most primitive precursor in the granulocytic series, having fine, evenly distributed chromatin, several nucleoli, and a nongranular basophilic cytoplasm." [ZFIN:ZDB-PUB-070221-1] xref: CL:0000835 xref: ZFIN:ZDB-ANAT-070308-285 is_a: ZFA:0009356 ! myeloid progenitor cell relationship: develops_from ZFA:0009251 ! granulocyte monocyte progenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009354 name: hematopoietic progenitor cell namespace: zebrafish_anatomy def: "A progenitor cell of any hematopoietic lineage, potentially multipotent." [CL:curator] comment: Note that this is a class of cell types, not an identified single cell type. synonym: "hemopoietic progenitor cell" RELATED [] xref: CL:0000837 xref: ZFIN:ZDB-ANAT-070308-286 relationship: develops_from ZFA:0009014 ! hematopoietic stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009355 name: lymphoid progenitor cell namespace: zebrafish_anatomy def: "A progenitor cell of any lymphoid lineage, potentially multipotent." [CL:curator] comment: Note that this is a class of cell types, not an identified single cell type. xref: CL:0000838 xref: ZFIN:ZDB-ANAT-070308-287 is_a: ZFA:0009354 ! hematopoietic progenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009356 name: myeloid progenitor cell namespace: zebrafish_anatomy def: "A progenitor cell of any myeloid lineage, potentially multipotent." [CL:curator] comment: Note that this is a class of cell types, not an identified single cell type. xref: CL:0000839 xref: ZFIN:ZDB-ANAT-070308-288 is_a: ZFA:0009354 ! hematopoietic progenitor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009357 name: mononuclear cell namespace: zebrafish_anatomy def: "A leukocyte with a single non-segmented nucleus in the mature form." [CL:curator] xref: CL:0000842 xref: ZFIN:ZDB-ANAT-070308-289 is_a: ZFA:0009309 ! leukocyte relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009358 name: ciliated olfactory receptor neuron namespace: zebrafish_anatomy def: "An olfactory receptor cell in which the apical ending of the dendrite is a pronounced ciliated olfactory knob." [ZFIN:ZDB-PUB-060724-7] synonym: "ciliated olfactory sensory neuron" RELATED [] synonym: "ciliated sensory neuron" RELATED [] xref: CL:0000847 xref: ZFIN:ZDB-ANAT-070308-290 is_a: ZFA:0009125 ! olfactory receptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009359 name: microvillous olfactory receptor neuron namespace: zebrafish_anatomy def: "An olfactory receptor cell in which the apical ending of the dendrite is a knob that bears numerous microvilli." [ZFIN:ZDB-PUB-060724-7] synonym: "microvillous olfactory sensory neuron" RELATED [] synonym: "microvillous sensory neuron" RELATED [] xref: CL:0000848 xref: ZFIN:ZDB-ANAT-070308-291 is_a: ZFA:0009125 ! olfactory receptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009360 name: crypt olfactory receptor neuron namespace: zebrafish_anatomy def: "An olfactory receptor cell with short cilia growing in an invagination bordered by microvilli." [ZFIN:ZDB-PUB-060724-7] synonym: "crypt cell" RELATED [] synonym: "crypt olfactory sensory neuron" RELATED [] synonym: "crypt sensory neuron" RELATED [] xref: CL:0000849 xref: ZFIN:ZDB-ANAT-070308-292 is_a: ZFA:0009125 ! olfactory receptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009361 name: serotonergic neuron namespace: zebrafish_anatomy def: "A neuron that releases serotonin as a neurotransmitter." [CL:curator] synonym: "5-HT neuron" RELATED [] synonym: "5-hydroxytryptamine neuron" RELATED [] xref: CL:0000850 xref: ZFIN:ZDB-ANAT-070308-293 is_a: ZFA:0009248 ! neuron relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009362 name: neuromast mantle cell namespace: zebrafish_anatomy def: "Neuromast mantle cell is a non-sensory cell. Neuromast mantle cells surround the neuromast support cells and neuromast hair cells, separating the neuromast from the epidermis, and secrete cupula in which the ciliary bundles of all the hair cells are embedded." [ZFIN:ZDB-PUB-070221-7] xref: CL:0000851 xref: ZFIN:ZDB-ANAT-070308-294 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009363 name: neuromast support cell namespace: zebrafish_anatomy def: "Neuromast support cell is a non-sensory cell of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; neuromast support cells are surrounded by neuromast mantle cells." [ZFIN:ZDB-PUB-070221-7] xref: CL:0000852 xref: ZFIN:ZDB-ANAT-070308-295 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009364 name: olfactory epithelial support cell namespace: zebrafish_anatomy def: "Olfactory epithelial support cell is a non ciliated columnar cell that extends from the epithelial free margin to the basement membrane of the olfactory epithelium." [CL:curator] synonym: "olfactory sustentacular cell" RELATED [] xref: CL:0000853 xref: ZFIN:ZDB-ANAT-070308-296 is_a: ZFA:0009000 ! cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009365 name: interneuromast cell namespace: zebrafish_anatomy def: "Interneuromast cell is a neuroectodermal cell deposited by the migrating lateral line primordium between the neuromasts. Interneuromast cells proliferate and migrate to form additional neuromasts." [CL:curator] xref: CL:0000854 xref: ZFIN:ZDB-ANAT-050711-65 is_a: ZFA:0009080 ! neurectodermal cell relationship: develops_from ZFA:0009012 ! neuroplacodal cell relationship: end ZFS:0000000 ! Unknown relationship: part_of ZFA:0000034 ! lateral line system relationship: start ZFS:0000029 ! Pharyngula:Prim-5 [Term] id: ZFA:0009366 name: hair cell namespace: zebrafish_anatomy def: "Hair cell is a mechanoreceptor cell that is sensitive to movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system." [CL:curator] xref: CL:0000855 xref: ZFIN:ZDB-ANAT-070308-297 is_a: ZFA:0009120 ! mechanoreceptor cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009367 name: neuromast hair cell namespace: zebrafish_anatomy def: "Neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface." [CL:curator] xref: CL:0000856 xref: ZFIN:ZDB-ANAT-070308-298 is_a: ZFA:0009366 ! hair cell relationship: end ZFS:0000044 ! Adult relationship: part_of ZFA:0000243 ! neuromast relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009368 name: slow muscle myoblast namespace: zebrafish_anatomy def: "A skeletal muscle myoblast that differentiates into slow muscle fibers." [CL:curator] xref: CL:0000857 xref: ZFIN:ZDB-ANAT-070308-299 is_a: ZFA:0009236 ! skeletal muscle myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009369 name: fast muscle myoblast namespace: zebrafish_anatomy def: "A skeletal muscle myoblast that differentiates into fast muscle fibers." [CL:curator] xref: CL:0000858 xref: ZFIN:ZDB-ANAT-070308-300 is_a: ZFA:0009236 ! skeletal muscle myoblast relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009370 name: stretch receptor cell namespace: zebrafish_anatomy xref: CL:1000082 xref: ZFIN:ZDB-ANAT-070308-301 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0009371 name: stratified keratinized epithelial stem cell namespace: zebrafish_anatomy xref: CL:1000083 xref: ZFIN:ZDB-ANAT-070308-302 is_a: ZFA:0009180 ! stratified epithelial stem cell relationship: end ZFS:0000044 ! Adult relationship: start ZFS:0000000 ! Unknown [Term] id: ZFA:0100000 name: zebrafish anatomical entity namespace: zebrafish_anatomy [Term] id: ZFS:0000000 name: Unknown namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-050211-1 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000001 name: Zygote:1-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-4 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000002 name: Cleavage:2-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-15 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000003 name: Cleavage:4-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-11 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000004 name: Cleavage:8-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-33 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000005 name: Cleavage:16-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-20 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000006 name: Cleavage:32-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-25 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000007 name: Cleavage:64-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-28 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000008 name: Blastula:128-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-7 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000009 name: Blastula:256-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-1 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000010 name: Blastula:512-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-14 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000011 name: Blastula:1k-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-22 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000012 name: Blastula:High namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-27 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000013 name: Blastula:Oblong namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-24 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000014 name: Blastula:Sphere namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-21 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000015 name: Blastula:Dome namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-19 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000016 name: Blastula:30%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-17 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000017 name: Gastrula:50%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-6 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000018 name: Gastrula:Germ-ring namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-3 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000019 name: Gastrula:Shield namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-2 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000020 name: Gastrula:75%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-18 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000021 name: Gastrula:90%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-29 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000022 name: Gastrula:Bud namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-12 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000023 name: Segmentation:1-4 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-23 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000024 name: Segmentation:5-9 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-5 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000025 name: Segmentation:10-13 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-020626-1 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000026 name: Segmentation:14-19 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-30 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000027 name: Segmentation:20-25 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-16 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000028 name: Segmentation:26+ somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-34 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000029 name: Pharyngula:Prim-5 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-10 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000030 name: Pharyngula:Prim-15 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-32 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000031 name: Pharyngula:Prim-25 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-13 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000032 name: Pharyngula:High-pec namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-31 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000033 name: Hatching:Long-pec namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-9 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000034 name: Hatching:Pec-fin namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-26 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000035 name: Larval:Protruding-mouth namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-8 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000036 name: Larval:Day 4 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-35 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000037 name: Larval:Day 5 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-36 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000038 name: Larval:Day 6 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-37 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000039 name: Larval:Days 7-13 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-47 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000040 name: Larval:Days 14-20 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-48 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000041 name: Larval:Days 21-29 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-49 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000042 name: Juvenile:Days 30-44 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-51 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000043 name: Juvenile:Days 45-89 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-52 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0000044 name: Adult namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-39 is_a: ZFS:0100000 ! Stages [Term] id: ZFS:0100000 name: Stages namespace: zebrafish_stages [Typedef] id: develops_from name: develops from is_transitive: true [Typedef] id: end name: end stage [Typedef] id: part_of name: part of is_transitive: true [Typedef] id: start name: start stage