format-version: 1.2
date: 29:04:2008 15:38
saved-by: Melissa Haendel
auto-generated-by: OBO-Edit 1.101
synonymtypedef: PLURAL "PLURAL"
default-namespace: zebrafish_anatomical_ontology
[Term]
id: ZFA:0000000
name: Brachet's cleft
namespace: zebrafish_anatomy
def: "The visible division between epiblast and hypoblast in the gastrula. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-404
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000001
name: Kupffer's vesicle
namespace: zebrafish_anatomy
def: "Small but distinctive epithelial sac containing fluid, located midventrally posterior to the yolk cell or its extension, and transiently present during most of the segmentation period. Kimmel et al, 1995. Kupffer's vesicle has been compared to the mouse embryonic node. Drummond et al, 2005." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-406
relationship: develops_from ZFA:0000023 ! forerunner cell group
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000077 ! tail bud
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000003
name: adaxial cell
namespace: zebrafish_anatomy
synonym: "adaxial cells" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-408
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000279 ! segmental plate
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000004
name: anterior axial hypoblast
namespace: zebrafish_anatomy
synonym: "pre-polster" RELATED [ZFIN:ZDB-PUB-051019-5]
xref: ZFIN:ZDB-ANAT-010921-409
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0001378 ! axial hypoblast
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000005
name: artery
namespace: zebrafish_anatomy
synonym: "arterial system" RELATED []
xref: ZFIN:ZDB-ANAT-010921-411
is_a: ZFA:0001079 ! vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000006
name: ball
namespace: zebrafish_anatomy
def: "The anterior round region of the yolk cell present after the yolk extension forms during the segmentation period. Kimmel et al, 1995." [ZFIN:curator]
synonym: "yolk ball" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-010921-413
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0000084 ! yolk
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000007
name: blood
namespace: zebrafish_anatomy
def: "A complex mixture of cells suspended in a liquid matrix that delivers nutrients to cells and removes wastes. (Source: BioGlossary, www.Biology-Text.com)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-414
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005023 ! hematopoietic system
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000008
name: brain
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-415
is_a: ZFA:0001490 ! cavitated compound organ
relationship: develops_from ZFA:0001135 ! neural tube
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000012 ! central nervous system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000009
name: cardiac ventricle
namespace: zebrafish_anatomy
def: "One of four heart chambers." [ZFIN:curator]
synonym: "ventricle" RELATED []
xref: ZFIN:ZDB-ANAT-010921-416
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000010
name: cardiovascular system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-417
is_a: ZFA:0001439 ! anatomical system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000011
name: caudal artery
namespace: zebrafish_anatomy
def: "Extension of the dorsal aorta in the tail. Kimmel et al, 1995." [ZFIN:curator]
synonym: "CA" RELATED []
xref: ZFIN:ZDB-ANAT-010921-418
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001073 ! axial vasculature
relationship: part_of ZFA:0005037 ! tail vasculature
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000012
name: central nervous system
namespace: zebrafish_anatomy
def: "The brain and spinal cord. Kimmel et al, 1995." [ZFIN:curator]
synonym: "cns" RELATED []
xref: ZFIN:ZDB-ANAT-010921-420
is_a: ZFA:0000396 ! nervous system
relationship: develops_from ZFA:0000063 ! presumptive neural plate
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000013
name: cranial ganglion
namespace: zebrafish_anatomy
def: "Ganglion which is located in the head." [ZFIN:curator]
synonym: "cranial ganglia" RELATED PLURAL []
synonym: "presumptive cranial ganglia" RELATED []
xref: ZFIN:ZDB-ANAT-010921-422
is_a: ZFA:0000190 ! ganglion
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000014
name: dorsal aorta
namespace: zebrafish_anatomy
def: "Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery. Kimmel et al, 1995." [ZFIN:curator]
synonym: "DA" RELATED []
xref: ZFIN:ZDB-ANAT-010921-424
is_a: ZFA:0000005 ! artery
relationship: develops_from ZFA:0005077 ! vascular cord
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001073 ! axial vasculature
relationship: part_of ZFA:0005024 ! trunk vasculature
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000015
name: anatomical set
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-1
is_obsolete: true
[Term]
id: ZFA:0000016
name: ectoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-427
is_a: ZFA:0001122 ! primary germ layer
relationship: develops_from ZFA:0001376 ! presumptive ectoderm
relationship: end ZFS:0000038 ! Larval:Day 6
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000017
name: endoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-428
is_a: ZFA:0001122 ! primary germ layer
relationship: develops_from ZFA:0000416 ! presumptive endoderm
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000018
name: epiblast
namespace: zebrafish_anatomy
def: "The outer of the two layers of the blastoderm that form during gastrulation, corresponding to primitive ectoderm during gastrulation and to the definitive ectoderm after gastrulation. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-429
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0000111 ! germ ring
relationship: start ZFS:0000018 ! Gastrula:Germ-ring
[Term]
id: ZFA:0000019
name: epiphysis
namespace: zebrafish_anatomy
def: "A circumscribed swelling, includes the pineal primordium that appears late in the segmentation period in the dorsal midline of the diencephalon. Kimmel et al, 1995." [ZFIN:curator]
synonym: "pineal gland" RELATED []
xref: ZFIN:ZDB-ANAT-010921-430
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001127 ! visual system
relationship: part_of ZFA:0001158 ! endocrine system
relationship: part_of ZFA:0001359 ! pineal complex
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000020
name: extraembryonic structure
namespace: zebrafish_anatomy
def: "Anatomical structure that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo." [ZFIN:curator]
xref: CARO:0000042
xref: ZFIN:ZDB-ANAT-010921-431
is_a: ZFA:0000037 ! anatomical structure
relationship: end ZFS:0000032 ! Pharyngula:High-pec
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0000022
name: floor plate
namespace: zebrafish_anatomy
synonym: "flexural organ" RELATED []
synonym: "floorplate" RELATED []
synonym: "fp" RELATED []
xref: ZFIN:ZDB-ANAT-010921-433
relationship: develops_from ZFA:0001218 ! presumptive floor plate
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000012 ! central nervous system
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000023
name: forerunner cell group
namespace: zebrafish_anatomy
def: "A group of cells that migrate at the leading edge of shield during gastrulation but do not involute. At the end of gastrulation, forerunner cells migrate deep into the embryo and organize to form Kuppfer's vesicle. Cooper and D'Amico, 1996." [ZFIN:curator]
synonym: "DFCs" RELATED []
synonym: "dorsal forerunner cells" RELATED []
synonym: "forerunner cells" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-434
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0001126 ! noninvoluting endocytic marginal cell cluster
relationship: end ZFS:0000023 ! Segmentation:1-4 somites
relationship: start ZFS:0000017 ! Gastrula:50%-epiboly
[Term]
id: ZFA:0000024
name: retinal ganglion cell layer
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-435
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000046 ! retinal neural layer
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000026
name: hatching gland
namespace: zebrafish_anatomy
def: "A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland. Kimmel et al, 1995." [ZFIN:curator]
synonym: "hgg" RELATED []
xref: ZFIN:ZDB-ANAT-010921-437
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000027
name: paired fin skeleton
namespace: zebrafish_anatomy
synonym: "appendicular skeleton" RELATED []
xref: ZFIN:ZDB-ANAT-060331-1
is_a: ZFA:0000434 ! skeletal system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000028
name: heart primordium
namespace: zebrafish_anatomy
def: "Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline between 21 and 26 somites to form the heart rudiment or cone. Stainier 2001." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-439
relationship: develops_from ZFA:0001065 ! lateral mesoderm
relationship: end ZFS:0000027 ! Segmentation:20-25 somites
relationship: part_of ZFA:0000010 ! cardiovascular system
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000029
name: hindbrain
namespace: zebrafish_anatomy
def: "The most posterior of the three principal regions of the brain, forming the rhombencephalon and all or most of the metencephalon. Kimmel et al, 1995." [ZFIN:curator]
synonym: "rhombencephalon" RELATED []
xref: ZFIN:ZDB-ANAT-010921-440
relationship: develops_from ZFA:0007043 ! hindbrain neural tube
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000008 ! brain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000030
name: macula utricle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-441
is_a: ZFA:0000386 ! macula
relationship: develops_from ZFA:0000168 ! anterior macula
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000700 ! utricle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000031
name: hypochord
namespace: zebrafish_anatomy
def: "A transient rod-like structure which is endodermally derived and located immediately ventral to the notochord. The hypochord is thought to play a role in positioning the dorsal aorta. Eriksson and Lofberg, 2000." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-442
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0000017 ! endoderm
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000032
name: hypothalamus
namespace: zebrafish_anatomy
def: "A specialized brain region of the ventral diencephalon arising near the end of the segmentation period; the embryonic hypothalamic region will give rise to the posterior pituitary gland as well as a number of brain nuclei. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-443
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000033
name: intermediate cell mass of mesoderm
namespace: zebrafish_anatomy
synonym: "ICM" RELATED []
synonym: "intermediate cell mass of Oellacher" RELATED []
synonym: "posterior intermediate cell mass" RELATED []
xref: ZFIN:ZDB-ANAT-010921-444
relationship: develops_from ZFA:0000121 ! lateral plate mesoderm
relationship: develops_from ZFA:0001201 ! ventral lateral mesoderm
relationship: end ZFS:0000033 ! Hatching:Long-pec
relationship: part_of ZFA:0005023 ! hematopoietic system
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000034
name: lateral line system
namespace: zebrafish_anatomy
def: "A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "ll" RELATED []
xref: ZFIN:ZDB-ANAT-010921-445
is_a: ZFA:0000282 ! sensory system
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000142 ! peripheral nervous system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000035
name: lens
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-447
relationship: develops_from ZFA:0000122 ! lens placode
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000107 ! eye
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000036
name: liver and biliary system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-449
is_a: ZFA:0001439 ! anatomical system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000037
name: anatomical structure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-2
is_a: ZFA:0100000 ! zebrafish anatomical entity
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0000038
name: margin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-451
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: start ZFS:0000016 ! Blastula:30%-epiboly
[Term]
id: ZFA:0000039
name: median axial vein
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-452
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000040
name: median fin fold
namespace: zebrafish_anatomy
synonym: "median fin" RELATED []
xref: ZFIN:ZDB-ANAT-010921-453
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000041
name: mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-454
is_a: ZFA:0001122 ! primary germ layer
relationship: develops_from ZFA:0001377 ! presumptive mesoderm
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000042
name: midbrain hindbrain boundary
namespace: zebrafish_anatomy
synonym: "isthmus" RELATED []
synonym: "mhb" RELATED []
xref: ZFIN:ZDB-ANAT-010921-455
relationship: develops_from ZFA:0007047 ! midbrain hindbrain boundary neural tube
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000008 ! brain
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000043
name: muscle pioneer somite 1
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 1" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-456
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000963 ! slow muscle cell somite 1
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000044
name: myotome somite 14
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-457
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000726 ! somite 14
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000045
name: neural crest
namespace: zebrafish_anatomy
def: "A cell population arising from the dorsolateral aspect of the central nervous system primordium during the segmentation period, and later migrating along stereotyped pathways to give rise to a diverse and well-defined set of cell types including pigment cells, peripheral neurons and glia, and head cartilage. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-458
is_a: ZFA:0001120 ! neuroectoderm
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000046
name: retinal neural layer
namespace: zebrafish_anatomy
synonym: "neuroretina" RELATED []
xref: ZFIN:ZDB-ANAT-010921-459
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000152 ! retina
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000047
name: peripheral olfactory organ
namespace: zebrafish_anatomy
synonym: "nose" RELATED []
xref: ZFIN:ZDB-ANAT-010921-463
relationship: develops_from ZFA:0000048 ! olfactory placode
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001149 ! olfactory system
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000048
name: olfactory placode
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-464
is_a: ZFA:0001309 ! neurogenic placode
relationship: develops_from ZFA:0007062 ! olfactory field
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001149 ! olfactory system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000049
name: optic recess
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-465
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000079 ! telencephalon
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000050
name: optic vesicle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-466
relationship: develops_from ZFA:0000570 ! optic primordium
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000107 ! eye
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000051
name: otic vesicle
namespace: zebrafish_anatomy
def: "Epithelial sac present beside the fifth rhombomere; forms the semicircular canals dorsally and the otolith organs ventrally, and houses the acoustico-vestibular sensory epithelia (maculae) of hair cells. Kimmel et al, 1995. (Also see Anatomical Atlas entry for ear by T. Whitfield.)" [ZFIN:curator]
synonym: "otic capsule" RELATED []
synonym: "otocyst" RELATED []
synonym: "ov" RELATED []
xref: ZFIN:ZDB-ANAT-010921-468
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0000138 ! otic placode
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000052
name: dorsal actinotrichium
namespace: zebrafish_anatomy
def: "Actinotrichium which is part of the dorsal fin fold." [ZFIN:curator]
synonym: "dorsal actinotrichia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060131-1
is_a: ZFA:0000089 ! actinotrichium
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000102 ! dorsal fin fold
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000053
name: presumptive segmental plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-470
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0000041 ! mesoderm
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000054
name: pericardial sac
namespace: zebrafish_anatomy
synonym: "pericardium" RELATED []
xref: ZFIN:ZDB-ANAT-010921-471
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000010 ! cardiovascular system
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000056
name: pharynx
namespace: zebrafish_anatomy
def: "Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-473
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000339 ! digestive system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000058
name: polster
namespace: zebrafish_anatomy
def: "The hatching gland rudiment at the time it underlies the forebrain during the early segmentation period. Kimmel et al, 1995." [ZFIN:curator]
synonym: "pillow" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-010921-475
relationship: develops_from ZFA:0000004 ! anterior axial hypoblast
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000060 ! prechordal plate
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000059
name: postoptic commissure
namespace: zebrafish_anatomy
synonym: "post optic commissure" RELATED []
synonym: "post-optic commissure" RELATED []
xref: ZFIN:ZDB-ANAT-010921-476
is_a: ZFA:0000338 ! diencephalic tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000060
name: prechordal plate
namespace: zebrafish_anatomy
def: "Axial hypoblast located anterior to the chorda mesoderm; the polster is its most anterior region. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-477
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001204 ! axial mesoderm
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000062
name: presumptive forebrain
namespace: zebrafish_anatomy
synonym: "presumptive prosencephalon" RELATED []
xref: ZFIN:ZDB-ANAT-010921-479
relationship: end ZFS:0000020 ! Gastrula:75%-epiboly
relationship: part_of ZFA:0000146 ! presumptive brain
relationship: part_of ZFA:0007014 ! anterior presumptive neural plate
relationship: start ZFS:0000019 ! Gastrula:Shield
[Term]
id: ZFA:0000063
name: presumptive neural plate
namespace: zebrafish_anatomy
alt_id: ZFA:0000061
def: "Region of the gastrula which gives rise to the neural plate." [ZFIN:curator]
synonym: "neurectoderm" RELATED []
synonym: "presumptive central nervous system" RELATED []
synonym: "prospective neuroectoderm" RELATED []
synonym: "prospective vegetal ectoderm" RELATED []
xref: ZFIN:ZDB-ANAT-010921-480
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000021 ! Gastrula:90%-epiboly
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000064
name: presumptive pigmented epithelium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-481
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000050 ! optic vesicle
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000066
name: proctodeum
namespace: zebrafish_anatomy
def: "An inward fold on the surface of the embryonic ectoderm that develops into part of the anal passage." [ZFIN:curator]
synonym: "anus" RELATED []
xref: ZFIN:ZDB-ANAT-010921-484
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000112 ! gut
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000067
name: pronephric mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-485
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0001206 ! intermediate mesoderm
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000068
name: proneural cluster
namespace: zebrafish_anatomy
synonym: "proneural clusters" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-486
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000132 ! neural plate
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000069
name: rhombomere 6
namespace: zebrafish_anatomy
def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator]
synonym: "r6" RELATED []
xref: ZFIN:ZDB-ANAT-010921-487
is_a: ZFA:0001064 ! rhombomere
relationship: develops_from ZFA:0001210 ! presumptive rhombomere 6
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000070
name: sensory axons peripheral
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-488
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000282 ! sensory system
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000071
name: shield
namespace: zebrafish_anatomy
synonym: "organizer" RELATED []
synonym: "Spemann Mangold organizer" RELATED []
synonym: "Spemann's organizer" RELATED []
xref: ZFIN:ZDB-ANAT-010921-489
relationship: end ZFS:0000019 ! Gastrula:Shield
relationship: part_of ZFA:0000111 ! germ ring
relationship: start ZFS:0000019 ! Gastrula:Shield
[Term]
id: ZFA:0000072
name: somite 1
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-490
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000073
name: somite 5
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-492
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000074
name: somite 26
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-493
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000075
name: spinal cord
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-494
relationship: develops_from ZFA:0007042 ! spinal cord neural tube
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000012 ! central nervous system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000076
name: swim bladder
namespace: zebrafish_anatomy
def: "The swim bladder is a double-chambered organ located in the coelom and used to maintain buoyancy and may function as an acoustic resonator. The zebrafish does not appear to have a gas gland, but it is not yet clear if there are gas producing cells distrubuted more widely. Finney et al, 2006." [ZFIN:curator]
synonym: "gas bladder" RELATED []
xref: ZFIN:ZDB-ANAT-010921-495
is_a: ZFA:0001490 ! cavitated compound organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000204 ! esophagus
relationship: part_of ZFA:0001438 ! coelom
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000077
name: tail bud
namespace: zebrafish_anatomy
synonym: "tailbud" RELATED []
xref: ZFIN:ZDB-ANAT-010921-496
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000078
name: ventral actinotrichium
namespace: zebrafish_anatomy
def: "Actinotrichium which is part of the ventral fin fold." [ZFIN:curator]
synonym: "ventral actinotrichia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060131-2
is_a: ZFA:0000089 ! actinotrichium
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001069 ! ventral fin fold
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000079
name: telencephalon
namespace: zebrafish_anatomy
def: "The anterior and dorsal forebrain neuromere, includes the olfactory bulb. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-498
relationship: develops_from ZFA:0000571 ! presumptive telencephalon
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000109 ! forebrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000080
name: trigeminal neural crest
namespace: zebrafish_anatomy
def: "Cranial neural crest which gives rise to the trigeminal ganglion." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-499
is_a: ZFA:0001194 ! cranial neural crest
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000081
name: trunk mesenchyme
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-500
is_a: ZFA:0000393 ! mesenchyme
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000082
name: vein
namespace: zebrafish_anatomy
synonym: "venous system" RELATED []
xref: ZFIN:ZDB-ANAT-010921-501
is_a: ZFA:0001079 ! vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000083
name: ventral mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-502
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000041 ! mesoderm
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000084
name: yolk
namespace: zebrafish_anatomy
def: "Nutrient store for embryonic development in the form of semicrystalline phospholipoprotein and contained within yolk granules. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-503
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0000085
name: apical ectodermal ridge pectoral fin bud
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-504
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: part_of ZFA:0000141 ! pectoral fin bud
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000086
name: EVL
namespace: zebrafish_anatomy
def: "Outermost monolayer of cells surrounding the embryo that become very flattened in the blastula and give rise to the periderm. Sometimes used synonymously with periderm. Kimmel et al, 1995." [ZFIN:curator]
synonym: "enveloping layer" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-010921-505
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0001484 ! superficial blastomere
relationship: end ZFS:0000021 ! Gastrula:90%-epiboly
relationship: part_of ZFA:0001176 ! blastoderm
relationship: start ZFS:0000016 ! Blastula:30%-epiboly
[Term]
id: ZFA:0000088
name: YSL
namespace: zebrafish_anatomy
def: "Peripheral layer of the yolk cell including nuclei and non-yolky cytoplasm. Kimmel et al, 1995." [ZFIN:curator]
synonym: "periblast" RELATED [ZFIN:ZDB-PUB-961014-576]
synonym: "yolk syncytial layer" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-010921-508
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0000084 ! yolk
relationship: develops_from ZFA:0000541 ! marginal blastomere
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: start ZFS:0000011 ! Blastula:1k-cell
[Term]
id: ZFA:0000089
name: actinotrichium
namespace: zebrafish_anatomy
def: "Portion of tissue which is a slender, horny, flexible, unsegmented fibril, which strengthens the embryonic fin fold. Actinotrichia are translucent, exhibit birefringence (double refraction) and are composed of the scleroprotein elastoidine. http://www.briancoad.com/Dictionary/A.htm" [ZFIN:curator]
synonym: "actinotrichia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060131-3
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000040 ! median fin fold
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000090
name: apical ectodermal ridge dorsal fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-511
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0001173 ! dorsal fin
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000091
name: axial chorda mesoderm
namespace: zebrafish_anatomy
alt_id: ZFA:0001219
synonym: "chordamesoderm" RELATED []
synonym: "presumptive notochord" RELATED []
xref: ZFIN:ZDB-ANAT-010921-512
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0001204 ! axial mesoderm
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000092
name: axis
namespace: zebrafish_anatomy
synonym: "midline" RELATED []
xref: ZFIN:ZDB-ANAT-010921-513
is_a: ZFA:0001308 ! organism subdivision
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: start ZFS:0000017 ! Gastrula:50%-epiboly
[Term]
id: ZFA:0000093
name: blastomere
namespace: zebrafish_anatomy
def: "A cell arising during cleavage; the term encompasses the partially cleaved, incomplete cells at the blastodisc margin before they collectively form the yolk syncytial layer (YSL) in the midblastula. Kimmel et al, 1995." [ZFIN:curator]
synonym: "blastomeres" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-514
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000015 ! Blastula:Dome
relationship: part_of ZFA:0001175 ! blastodisc
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0000094
name: blood island
namespace: zebrafish_anatomy
def: "Nests of developing blood cells arising late in the segmentation period from the intermediate mass, and located in the anterior-ventral tail, just posterior to the yolk extension. Kimmel et al, 1995." [ZFIN:curator]
synonym: "blood islands" RELATED PLURAL []
synonym: "caudal hematopoietic tissue" RELATED []
synonym: "posterior blood island" RELATED []
synonym: "posterior ICM" RELATED []
xref: ZFIN:ZDB-ANAT-010921-515
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000033 ! intermediate cell mass of mesoderm
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000095
name: pharyngeal arch 3-7 skeleton
namespace: zebrafish_anatomy
def: "Skeletal and cartilagenous elements of the gill arches; the last five of the set of seven pharyngeal arches; the numbering system can be confusing; generally branchial arch #1 is the first gill arch, or the third pharyngeal arch, but some authors do not follow this convention. Kimmel et al, 1995." [ZFIN:curator]
synonym: "branchial arches" RELATED []
synonym: "gill arches 1-5" RELATED []
synonym: "visceral arches 3-7" RELATED []
xref: ZFIN:ZDB-ANAT-010921-516
is_a: ZFA:0001216 ! splanchnocranium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000096
name: cardinal system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-517
is_a: ZFA:0001079 ! vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000097
name: carotid artery
namespace: zebrafish_anatomy
def: "Artery originating at the junction of the first two aortic arches and supplying the anterior brain. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-518
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000098
name: proliferative region
namespace: zebrafish_anatomy
synonym: "cell cycle" RELATED []
synonym: "cell division" RELATED []
synonym: "proliferation" RELATED []
xref: ZFIN:ZDB-ANAT-010921-520
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000012 ! Blastula:High
[Term]
id: ZFA:0000099
name: brain vasculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-4
is_a: ZFA:0001267 ! cranial vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000100
name: cerebellum
namespace: zebrafish_anatomy
def: "Specialized brain region derived from the dorsal metencephalon (anterior hindbrain, and perhaps including posterior midbrain) and becoming distinctive late in the segmentation period. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-522
relationship: develops_from ZFA:0001442 ! upper rhombic lip
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000029 ! hindbrain
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000101
name: diencephalon
namespace: zebrafish_anatomy
def: "The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis). Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-524
relationship: develops_from ZFA:0000574 ! presumptive diencephalon
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000109 ! forebrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000102
name: dorsal fin fold
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-525
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000040 ! median fin fold
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000103
name: embryo
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-528
is_obsolete: true
[Term]
id: ZFA:0000104
name: lateral cells
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-529
is_obsolete: true
[Term]
id: ZFA:0000105
name: epidermis
namespace: zebrafish_anatomy
def: "A cellular, multilayered epithelium derived from the ectoderm. Zebrafish epidermis consists only of living cells unlike terrestrial vertebrates in which dead, keratinized cells are present. Le Guellec et al, 2004." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-530
relationship: develops_from ZFA:0000016 ! ectoderm
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000368 ! integument
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000106
name: extension
namespace: zebrafish_anatomy
def: "The posterior elongated region of the yolk cell that forms during the segmentation period. Kimmel et al, 1995." [ZFIN:curator]
synonym: "yolk extension" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-010921-531
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0000084 ! yolk
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000107
name: eye
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-532
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001114 ! head
relationship: part_of ZFA:0001127 ! visual system
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000108
name: fin
namespace: zebrafish_anatomy
synonym: "fins" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-533
is_a: ZFA:0000292 ! surface structure
relationship: develops_from ZFA:0001383 ! fin bud
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000109
name: forebrain
namespace: zebrafish_anatomy
def: "The most anterior region the brain including both the telencephalon and diencephalon. Kimmel et al, 1995." [ZFIN:curator]
synonym: "prosencephalon" RELATED []
xref: ZFIN:ZDB-ANAT-010921-534
relationship: develops_from ZFA:0007041 ! forebrain neural tube
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000008 ! brain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000110
name: fourth ventricle
namespace: zebrafish_anatomy
def: "Fluid-filled brain cavity. Kimmel et al, 1995." [ZFIN:curator]
synonym: "4th ventricle" RELATED []
synonym: "hindbrain ventricle" RELATED []
synonym: "rhombencephalic ventricle" RELATED []
synonym: "rhombencephalic vesicle" RELATED []
xref: ZFIN:ZDB-ANAT-010921-535
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000029 ! hindbrain
relationship: part_of ZFA:0001261 ! ventricular system
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000111
name: germ ring
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-536
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0000038 ! margin
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: start ZFS:0000018 ! Gastrula:Germ-ring
[Term]
id: ZFA:0000112
name: gut
namespace: zebrafish_anatomy
def: "The alimentary or digestive tract, and associated organs." [ZFIN:curator]
synonym: "alimentary canal" RELATED []
synonym: "gut tube" RELATED []
xref: ZFIN:ZDB-ANAT-010921-537
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000339 ! digestive system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000113
name: head mesenchyme
namespace: zebrafish_anatomy
def: "Mesoderm that will give rise, along with cranial neural crest cells, to connective tissue, bone and musculature in the head. (Source: BioGlossary, www.Biology-Text.com)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-538
is_a: ZFA:0000393 ! mesenchyme
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000114
name: heart
namespace: zebrafish_anatomy
def: "Blood pumping organ composed of four chambers: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-539
is_a: ZFA:0000496 ! compound organ
relationship: develops_from ZFA:0000360 ! heart tube
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000010 ! cardiovascular system
relationship: part_of ZFA:0001438 ! coelom
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000115
name: heart rudiment
namespace: zebrafish_anatomy
def: "The migrating myocardial precursors of the heart rudiment form a cone like structure between 19.5hpf and 22hpf, and eventually telescope out into the primitive heart tube at 24hpf. Stainier 2001." [ZFIN:curator]
synonym: "heart cone" RELATED []
synonym: "rudimentary heart" RELATED []
xref: ZFIN:ZDB-ANAT-010921-540
relationship: develops_from ZFA:0000028 ! heart primordium
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000116
name: macula lagena
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-541
is_a: ZFA:0000386 ! macula
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000374 ! lagena
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000117
name: hypoblast
namespace: zebrafish_anatomy
def: "The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm. Kimmel et al, 1995." [ZFIN:curator]
synonym: "mesendoderm" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-010921-542
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0000111 ! germ ring
relationship: start ZFS:0000018 ! Gastrula:Germ-ring
[Term]
id: ZFA:0000118
name: hypophysis
namespace: zebrafish_anatomy
def: "An endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin." [ZFIN:curator]
synonym: "pituitary" RELATED []
xref: ZFIN:ZDB-ANAT-010921-543
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: part_of ZFA:0001158 ! endocrine system
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000119
name: retinal inner nuclear layer
namespace: zebrafish_anatomy
synonym: "inner nuclear layer" RELATED PLURAL []
synonym: "intermediate cell layer" RELATED []
xref: ZFIN:ZDB-ANAT-010921-544
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000046 ! retinal neural layer
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000120
name: lateral line ganglion
namespace: zebrafish_anatomy
synonym: "lateral line ganglia" RELATED PLURAL []
synonym: "llg" RELATED []
xref: ZFIN:ZDB-ANAT-010921-546
is_a: ZFA:0000013 ! cranial ganglion
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000034 ! lateral line system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000121
name: lateral plate mesoderm
namespace: zebrafish_anatomy
synonym: "lateral plate" RELATED []
xref: ZFIN:ZDB-ANAT-010921-547
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000041 ! mesoderm
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000122
name: lens placode
namespace: zebrafish_anatomy
def: "Ectodermal primordium of the lens of the eye. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-548
relationship: end ZFS:0000026 ! Segmentation:14-19 somites
relationship: part_of ZFA:0000016 ! ectoderm
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000123
name: liver
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-549
relationship: develops_from ZFA:0000124 ! liver primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000036 ! liver and biliary system
relationship: part_of ZFA:0000339 ! digestive system
relationship: part_of ZFA:0001159 ! immune system
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000124
name: liver primordium
namespace: zebrafish_anatomy
synonym: "liver bud" RELATED []
xref: ZFIN:ZDB-ANAT-010921-550
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000036 ! liver and biliary system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000125
name: mandibular lateral line neuromast
namespace: zebrafish_anatomy
def: "Neuromast that is part of the mandibular lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromast mandibular" RELATED []
synonym: "neuromasts mandibular" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-551
is_a: ZFA:0000243 ! neuromast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000259 ! mandibular lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000126
name: centrum
namespace: zebrafish_anatomy
def: "Centra are represented by mineralized, calcified, or ossified portions that surround the notochord. The autocentrum, present in Danio and all other living teleosts, is formed by direct ossification outside the elastica externa of the notochord (Arratia, 1999)." [ZFIN:curator]
synonym: "autocentrum" RELATED []
xref: ZFIN:ZDB-ANAT-060331-2
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001189 ! vertebra
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0000127
name: mesenchyme condensations
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-554
is_obsolete: true
[Term]
id: ZFA:0000128
name: midbrain
namespace: zebrafish_anatomy
def: "The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally. Kimmel et al, 1995." [ZFIN:curator]
synonym: "mesencephalon" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-010921-555
relationship: develops_from ZFA:0007039 ! midbrain neural tube
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000008 ! brain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000130
name: olfactory pit
namespace: zebrafish_anatomy
synonym: "nasal cavity" RELATED []
synonym: "nasal pit" RELATED []
synonym: "olfactory cavity" RELATED []
xref: ZFIN:ZDB-ANAT-010921-558
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000047 ! peripheral olfactory organ
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000131
name: neural keel
namespace: zebrafish_anatomy
def: "An intermediate stage (between the neural plate and neural rod) during the early segmentation period in the morphogenesis of the central nervous system primordium; the keel is roughly triangular shaped in cross section. Kimmel et al, 1995." [ZFIN:curator]
synonym: "presumptive central nervous system" RELATED []
xref: ZFIN:ZDB-ANAT-010921-559
is_a: ZFA:0001120 ! neuroectoderm
relationship: develops_from ZFA:0000132 ! neural plate
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000132
name: neural plate
namespace: zebrafish_anatomy
def: "The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995." [ZFIN:curator]
synonym: "presumptive central nervous system" RELATED []
xref: ZFIN:ZDB-ANAT-010921-560
is_a: ZFA:0001120 ! neuroectoderm
relationship: develops_from ZFA:0000063 ! presumptive neural plate
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000133
name: neural rod
namespace: zebrafish_anatomy
def: "An intermediate stage in the development of the central nervous system present during the segmentation period; the neural rod is roughly cylindrical in shape, forms from the neural keel, and is not yet hollowed out into the neural tube. Kimmel et al, 1995." [ZFIN:curator]
synonym: "presumptive central nervous system" RELATED []
xref: ZFIN:ZDB-ANAT-010921-561
is_a: ZFA:0001120 ! neuroectoderm
relationship: develops_from ZFA:0000131 ! neural keel
relationship: end ZFS:0000026 ! Segmentation:14-19 somites
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000135
name: notochord
namespace: zebrafish_anatomy
def: "Rod-like principal supportive element of the embryo and larva, present in the midline just ventral to the neural tube, and differentiating during the segmentation period to form large vacuolated epithelial cells and a surrounding a sheath of fibrous and elastic layers. Layering of the sheath may differ in structure, thickness and development among groups; in cypriniforms there are actually three very thin layers to the sheath. A functional, well developed notochord is present throughout life in certain basal fish groups but not in cypriniforms. Kimmel et al, 1995." [ZFIN:curator]
synonym: "notocord" RELATED []
xref: ZFIN:ZDB-ANAT-010921-564
is_a: ZFA:0001477 ! portion of tissue
relationship: develops_from ZFA:0000091 ! axial chorda mesoderm
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000862 ! caudal fin skeleton
relationship: part_of ZFA:0001414 ! occipital region
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000136
name: otic lateral line neuromast
namespace: zebrafish_anatomy
def: "Neuromast that is part of the otic lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromast otic" RELATED []
synonym: "neuromasts otic" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-565
is_a: ZFA:0000243 ! neuromast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000464 ! otic lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000137
name: optic stalk
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-566
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000138
name: otic placode
namespace: zebrafish_anatomy
def: "Primordium of the ear epithelium before it hollows into the otic vesicle, present beside the hindbrain rudiment in the midsegmentation period. Kimmel et al, 1995. (Also see Anatomical Atlas entry for ear by T. Whitfield.)" [ZFIN:curator]
synonym: "otic capsule" RELATED []
synonym: "otocyst" RELATED []
xref: ZFIN:ZDB-ANAT-010921-568
is_a: ZFA:0001310 ! dorsolateral placode
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0001138 ! vestibuloauditory system
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000140
name: pancreas
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-570
is_a: ZFA:0000496 ! compound organ
relationship: develops_from ZFA:0001390 ! pancreatic bud
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001371 ! pancreatic system
relationship: part_of ZFA:0001438 ! coelom
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000141
name: pectoral fin bud
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-571
is_a: ZFA:0001383 ! fin bud
relationship: develops_from ZFA:0001453 ! pectoral fin field
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000142
name: peripheral nervous system
namespace: zebrafish_anatomy
def: "Nervous structures including ganglia outside of the central nervous system. Kimmel et al, 1995." [ZFIN:curator]
synonym: "pns" RELATED []
xref: ZFIN:ZDB-ANAT-010921-572
is_a: ZFA:0000396 ! nervous system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000143
name: retinal photoreceptor layer
namespace: zebrafish_anatomy
def: "The layer within the retina where the photoreceptor cell receptor segments reside." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-574
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000046 ! retinal neural layer
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000144
name: retinal pigmented epithelium
namespace: zebrafish_anatomy
def: "A monolayer of pigmented epithelium covering the neural retina; develops from the outer of the two layers of the optic cup. Kimmel et al, 1995." [ZFIN:curator]
synonym: "pigmented epithelium" RELATED []
synonym: "pigmented retinal epithelium" RELATED []
synonym: "PRE" RELATED []
synonym: "RPE" RELATED []
xref: ZFIN:ZDB-ANAT-010921-575
relationship: develops_from ZFA:0000064 ! presumptive pigmented epithelium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000152 ! retina
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000145
name: CNS tracts and commissures
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-5
is_a: ZFA:0001488 ! multi-tissue structure
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000012 ! central nervous system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000146
name: presumptive brain
namespace: zebrafish_anatomy
synonym: "brain rudiment" RELATED []
xref: ZFIN:ZDB-ANAT-010921-578
relationship: end ZFS:0000020 ! Gastrula:75%-epiboly
relationship: part_of ZFA:0000063 ! presumptive neural plate
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000148
name: presumptive midbrain
namespace: zebrafish_anatomy
synonym: "presumptive mesencephalon" RELATED []
xref: ZFIN:ZDB-ANAT-010921-580
relationship: end ZFS:0000020 ! Gastrula:75%-epiboly
relationship: part_of ZFA:0000146 ! presumptive brain
relationship: part_of ZFA:0007014 ! anterior presumptive neural plate
relationship: start ZFS:0000019 ! Gastrula:Shield
[Term]
id: ZFA:0000149
name: primitive heart tube
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-583
relationship: develops_from ZFA:0000115 ! heart rudiment
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000150
name: pronephric duct
namespace: zebrafish_anatomy
def: "Duct of the embryonic kidney, present bilaterally ventral to the somites and leading to the cloacal chamber. Kimmel et al, 1995. Wingert et al have suggested that the pronephric duct as described traditionally may consist of subregions which are analogous to portions of the tubule segment of mammalian and other fish nephrons. Wingert, 2007." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-585
relationship: develops_from ZFA:0000067 ! pronephric mesoderm
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000151 ! pronephros
relationship: part_of ZFA:0000163 ! renal system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000151
name: pronephros
namespace: zebrafish_anatomy
def: "The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.Kimmel et al, 1995." [ZFIN:curator]
synonym: "embryonic kidney" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-010921-586
is_a: ZFA:0001490 ! cavitated compound organ
relationship: develops_from ZFA:0000067 ! pronephric mesoderm
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000163 ! renal system
relationship: part_of ZFA:0001438 ! coelom
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000152
name: retina
namespace: zebrafish_anatomy
def: "The portion of the eye developing from the optic primordium and including the neural retina and the retinal pigment layer. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-587
relationship: develops_from ZFA:0001071 ! presumptive retina
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001202 ! optic cup
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000153
name: rhombomere 8
namespace: zebrafish_anatomy
def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator]
synonym: "r8" RELATED []
xref: ZFIN:ZDB-ANAT-010921-588
is_a: ZFA:0001064 ! rhombomere
relationship: develops_from ZFA:0001214 ! presumptive rhombomere 8
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000154
name: sinus venosus
namespace: zebrafish_anatomy
def: "Heart region collecting blood from the paired common cardinal veins and delivering to the atrium. One of four heart chambers, the sinus venosus also acts as a pacemaker and is the first to contract. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-590
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000155
name: somite
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal components of early trunk or tail segments or metameres, derived from paraxial mesoderm; forms myotomes, sclerotomes and perhaps dermatomes. Kimmel et al, 1995." [ZFIN:curator]
synonym: "somitic mesoderm" RELATED []
xref: ZFIN:ZDB-ANAT-010921-591
relationship: develops_from ZFA:0000279 ! segmental plate
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001115 ! trunk
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000156
name: somite 20
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-593
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000157
name: somite 30
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-594
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000158
name: urostyle
namespace: zebrafish_anatomy
def: "This centrum may be formed via the fusion of the terminal centrum and half-centrum. It is sometimes termed the 'ultimate' vertebra. Mabee and Bird, 2001." [ZFIN:curator]
synonym: "compound centrum" RELATED []
synonym: "last vertebra" RELATED []
synonym: "ultimate vertebra" RELATED []
xref: ZFIN:ZDB-ANAT-010921-596
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001581 ! ural centrum 2
relationship: develops_from ZFA:0001583 ! preural centrum 1+ ural centrum 1
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000862 ! caudal fin skeleton
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0000159
name: tectal ventricle
namespace: zebrafish_anatomy
synonym: "cerebral aquaduct" RELATED []
synonym: "medial tectal ventricle" RELATED []
synonym: "mesencephalic ventricle" RELATED []
synonym: "mesencephalic vesicle" RELATED []
synonym: "midbrain ventricle" RELATED []
xref: ZFIN:ZDB-ANAT-010921-597
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000128 ! midbrain
relationship: part_of ZFA:0001261 ! ventricular system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000160
name: tegmentum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-598
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001354 ! mesencephalic tegmentum
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000161
name: third ventricle
namespace: zebrafish_anatomy
def: "Fluid-filled brain cavity. Kimmel et al, 1995." [ZFIN:curator]
synonym: "3rd ventricle" RELATED []
synonym: "diencephalic ventricle" RELATED []
synonym: "diencephalic vesicle" RELATED []
xref: ZFIN:ZDB-ANAT-010921-599
relationship: develops_from ZFA:0001259 ! forebrain ventricle
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: part_of ZFA:0001261 ! ventricular system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000162
name: trigeminal placode
namespace: zebrafish_anatomy
def: "The ectodermal rudiment of the trigeminal ganglion, distinguishable during much of the segmentation period. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-600
is_a: ZFA:0001310 ! dorsolateral placode
relationship: end ZFS:0000026 ! Segmentation:14-19 somites
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000163
name: renal system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-601
is_a: ZFA:0001439 ! anatomical system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000164
name: ventral mesenchyme
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-602
is_a: ZFA:0000393 ! mesenchyme
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000165
name: inferior lobe
namespace: zebrafish_anatomy
synonym: "inferior lobes" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-1
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000347 ! dorsal zone
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000166
name: lateral crista
namespace: zebrafish_anatomy
alt_id: ZFA:0000378
def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator]
synonym: "lateral crista ampullaris" RELATED []
synonym: "lateral cristae" RELATED PLURAL []
synonym: "lc" RELATED []
synonym: "sensory patch" RELATED []
synonym: "sensory patches" RELATED []
xref: ZFIN:ZDB-ANAT-011113-10
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000220 ! lateral semicircular canal
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0000167
name: anal fin skeleton
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-100
is_a: ZFA:0001123 ! axial fin skeleton
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001162 ! anal fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000168
name: anterior macula
namespace: zebrafish_anatomy
def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator]
synonym: "am" RELATED []
synonym: "sensory patch" RELATED []
xref: ZFIN:ZDB-ANAT-011113-101
is_a: ZFA:0000386 ! macula
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000169
name: antorbital
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-102
is_obsolete: true
[Term]
id: ZFA:0000170
name: basibranchial
namespace: zebrafish_anatomy
def: "Median elements that are ossified within copulae and are not assigned to a specific branchial arch number. They articulate posterolaterally with the hypobranchials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-104
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001220 ! copula
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000171
name: basisphenoid
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-105
is_obsolete: true
[Term]
id: ZFA:0000172
name: branchial muscle
namespace: zebrafish_anatomy
synonym: "branchial muscles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-106
is_a: ZFA:0005145 ! muscle
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001307 ! pharyngeal musculature
relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000173
name: bulbus arteriosus
namespace: zebrafish_anatomy
def: "A pear shaped chamber that functions as a capacitor, maintaining continuous blood flow into the gill arches. The bulbus arteriosus has three distinct layers. Hu et al. 2000." [ZFIN:curator]
synonym: "outflow tract" RELATED []
synonym: "truncus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-107
relationship: develops_from ZFA:0000818 ! vagal neural crest
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000174
name: caudal cerebellar tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-108
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000175
name: posterior lateral line nerve
namespace: zebrafish_anatomy
def: "Cranial nerve which enters the brain between cranial nerves VIII and IX; contains afferents and sensory efferents to the posterior lateral line ganglion and middle ganglion. Fibers from the posterior lateral line ganglion innervate the occipital dorsal lateral line and trunk lateral lines." [ZFIN:curator]
synonym: "caudal lateral line nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-109
is_a: ZFA:0000641 ! cranial nerve
is_a: ZFA:0001479 ! lateral line nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001471 ! posterior lateral line system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000176
name: lateral entopeduncular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-11
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000304 ! ventral telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000177
name: caudal oblique
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-110
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000178
name: caudal peduncle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-111
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000179
name: caudal root of abducens nerve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-112
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000180
name: caudal vein
namespace: zebrafish_anatomy
def: "Vein in the tail returning blood from the trunk and tail to the heart, leads directly into the posterial cardinal vein in the posterior trunk. Kimmel et al, 1995." [ZFIN:curator]
synonym: "CV" RELATED []
xref: ZFIN:ZDB-ANAT-011113-113
is_a: ZFA:0000082 ! vein
relationship: develops_from ZFA:0001286 ! caudal vein plexus
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001073 ! axial vasculature
relationship: part_of ZFA:0005037 ! tail vasculature
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000181
name: caudal zone of D
namespace: zebrafish_anatomy
synonym: "posterior zone of dorsal telencephalic area" RELATED []
xref: ZFIN:ZDB-ANAT-011113-114
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000505 ! dorsal telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000182
name: central caudal thalamic nucleus
namespace: zebrafish_anatomy
synonym: "central posterior thalamic nucleus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-115
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000653 ! dorsal thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000183
name: central pretectum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-116
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000418 ! pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000184
name: cleithrum
namespace: zebrafish_anatomy
def: "Transversely oriented bone connecting the occipital region of the skull dorsally and pectoral girdle ventrally; appears near the end of embryogenesis. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-117
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000185
name: commissura rostral, pars ventralis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-118
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001108 ! anterior commissure
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000186
name: common cardinal vein
namespace: zebrafish_anatomy
def: "Bilaterally paired longitudinal vein; the anterior cardinal returns blood from the head, and the posterior cardinal returns it from the trunk; these two vessels join together on each side as the common cardinal vein (duct of Cuvier; misnamed the vitelline vein) that leads across the yolk cell to the heart's sinus venosus. Kimmel et al, 1995." [ZFIN:curator]
synonym: "duct of Cuvier" RELATED []
xref: ZFIN:ZDB-ANAT-011113-119
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000096 ! cardinal system
relationship: part_of ZFA:0005024 ! trunk vasculature
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000187
name: lateral granular eminence
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-12
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000307 ! vestibulolateralis lobe
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000188
name: corpus cerebelli
namespace: zebrafish_anatomy
synonym: "cerebellar corpus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-120
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000100 ! cerebellum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000189
name: otic region
namespace: zebrafish_anatomy
synonym: "cranial vault" RELATED []
xref: ZFIN:ZDB-ANAT-011113-121
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001424 ! chondrocranium
relationship: part_of ZFA:0001580 ! neurocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000190
name: ganglion
namespace: zebrafish_anatomy
def: "Structures containing a collection of nerve cell bodies. (Source: BioGlossary, www.Biology-Text.com)" [ZFIN:curator]
synonym: "ganglia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-122
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000142 ! peripheral nervous system
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000191
name: dentary
namespace: zebrafish_anatomy
def: "The dentary is a dermal bone that forms the antero-lateral part of the lower jaw. It first appears around the anterior end of Meckel's cartilage (5.1 mm NL). In the adult, the dentary meets its counterpart anteriorly at the mandibular symphysis. The dentary abuts the retroarticular posteriorly, and it surround the anguloarticular. The dentary is connected to the maxilla by the maxillo-mandibular ligament. Dentary teeth are absent in cypriniforms, but are present in other ostariophysans." [ZFIN:curator]
synonym: "dentary bone" RELATED []
xref: ZFIN:ZDB-ANAT-011113-123
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001273 ! ventral mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000192
name: descending trigeminal root
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-124
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000193
name: diffuse nuclei
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-125
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000165 ! inferior lobe
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000194
name: dorsal accessory optic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-126
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000183 ! central pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000195
name: dorsal depressor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-127
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000648 ! dorsal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000196
name: dorsal hypohyal
namespace: zebrafish_anatomy
def: "The dorsal hypohyal is a small cartilage replacement bone ossifying from the anterodorsal ceratohyal cartilage. Ossification begins on the medial surface of the ceratohyal cartilage at a ligamentous connection to basibranchial 1 (6.8 mm)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-128
is_a: ZFA:0001381 ! hypohyal
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000197
name: dorsal nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-129
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000213 ! habenula
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000199
name: dorsal periventricular hypothalamus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-130
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000347 ! dorsal zone
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000200
name: dorsal root ganglion
namespace: zebrafish_anatomy
def: "Trunk ganglion which is located adjacent to the spine on a dorsal root and contains the cell bodies of afferent sensory nerves." [ZFIN:curator]
synonym: "dorsal root ganglia" RELATED []
synonym: "DRG" RELATED []
xref: ZFIN:ZDB-ANAT-011113-131
is_a: ZFA:0001573 ! trunk ganglion
relationship: develops_from ZFA:0001024 ! trunk neural crest
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000201
name: dorsal transverse
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-132
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000202
name: efferent branchial artery
namespace: zebrafish_anatomy
synonym: "EBA" RELATED []
xref: ZFIN:ZDB-ANAT-011113-133
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: part_of ZFA:0005003 ! pharyngeal vasculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000203
name: epicentrals
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-134
is_obsolete: true
[Term]
id: ZFA:0000204
name: esophagus
namespace: zebrafish_anatomy
synonym: "oesophagus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-135
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000112 ! gut
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000205
name: external ventral flexor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-136
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000628 ! caudal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000206
name: facial nerve motor nucleus
namespace: zebrafish_anatomy
synonym: "motor nucleus VII" RELATED []
synonym: "nVII" RELATED []
xref: ZFIN:ZDB-ANAT-011113-137
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000207
name: fin musculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-138
is_a: ZFA:0000548 ! musculature system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000208
name: gall bladder
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-139
is_a: ZFA:0000496 ! compound organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000339 ! digestive system
relationship: part_of ZFA:0001438 ! coelom
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000209
name: lateral preglomerular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-14
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000210
name: gigantocellular part of magnocellular preoptic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-140
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000470 ! preoptic area
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000211
name: gill lamella
namespace: zebrafish_anatomy
synonym: "gill lamellae" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-141
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000212
name: granular eminence
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-142
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000100 ! cerebellum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000213
name: habenula
namespace: zebrafish_anatomy
def: "The habenula relays impulses from limbic areas of the telencephalon to an unpaired midbrain nucleus, the interpeduncular nucleus." [ZFIN:curator]
synonym: "habenulae" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-143
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000509 ! epithalamus
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000214
name: hypobranchial vessel
namespace: zebrafish_anatomy
synonym: "hypobranchial vessels" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-144
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000215
name: inferior olive
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-145
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000216
name: infracarinalis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-146
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000473 ! trunk musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000217
name: inner ear
namespace: zebrafish_anatomy
def: "The auditory (hearing) and vestibular (balance) organ of the fish, equivalent to the inner ear of amniotes. (See Anatomical Atlas entry for ear by T. Whitfield.)" [ZFIN:curator]
synonym: "ear" RELATED []
synonym: "otic capsule" RELATED []
synonym: "otocyst" RELATED []
xref: ZFIN:ZDB-ANAT-011113-147
is_a: ZFA:0001478 ! anatomical cluster
relationship: develops_from ZFA:0000051 ! otic vesicle
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001138 ! vestibuloauditory system
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000219
name: intermediate reticular formation
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-149
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000542 ! medial column
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000220
name: lateral semicircular canal
namespace: zebrafish_anatomy
alt_id: ZFA:0000361
def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)" [ZFIN:curator]
synonym: "horizontal semicircular canal" RELATED []
synonym: "lateral semicircular canals" RELATED []
synonym: "lateral semicircular duct" RELATED []
xref: ZFIN:ZDB-ANAT-011113-15
relationship: develops_from ZFA:0000232 ! lateral semicircular canal primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000431 ! semicircular canal
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000221
name: internal levator
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-150
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000222
name: isthmic primary nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-152
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000433 ! sensory trigeminal nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000223
name: infraorbital 1
namespace: zebrafish_anatomy
def: "Dermal bone that covers the region between the anterior margin of the eye and the upper jaw. Infraorbital 1 (the lachrymal) is the first and largest bone in the infraorbital series. Bears the anterior most part of the infraorbital canal." [ZFIN:curator]
synonym: "lachrymal bone" RELATED []
synonym: "lacrimal" RELATED []
synonym: "lacrymal bone" RELATED []
xref: ZFIN:ZDB-ANAT-011113-153
is_a: ZFA:0000376 ! infraorbital
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0000224
name: larva
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-154
is_obsolete: true
[Term]
id: ZFA:0000225
name: lateral crista primordium
namespace: zebrafish_anatomy
synonym: "lateral crista primordia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-155
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0000220 ! lateral semicircular canal
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000226
name: lateral ethmoid
namespace: zebrafish_anatomy
def: "Large, paired cartilage bones separating the olfactory region from the orbit. Arises from both perichondral and endochondral ossifications (Harrington 1955). Bordered by the mesethmoid anteriorly and overlain by the frontal dorsally, each lateral ethmoid extends medially to meet its fellow posteriorly along the midline. Develops from the laminae orbitonasales." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-156
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001503 ! lamina orbitonasalis
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000351 ! olfactory region
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0000227
name: lateral hypothalamic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-157
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000707 ! ventral zone
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000228
name: lateral line primordium
namespace: zebrafish_anatomy
synonym: "lateral line primordia" RELATED PLURAL []
synonym: "llp" RELATED []
xref: ZFIN:ZDB-ANAT-011113-158
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0000034 ! lateral line system
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000229
name: lateral olfactory tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-159
is_a: ZFA:0000597 ! telencephalic tracts
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000230
name: longitudinal hypochordal
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-16
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000628 ! caudal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000231
name: lateral recess
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-160
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000161 ! third ventricle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000232
name: lateral semicircular canal primordium
namespace: zebrafish_anatomy
synonym: "lateral semicircular canal primordia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-161
relationship: end ZFS:0000032 ! Pharyngula:High-pec
relationship: part_of ZFA:0000431 ! semicircular canal
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000233
name: lower oral valve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-162
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000695 ! labial cavities
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000234
name: macula neglecta
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-163
is_a: ZFA:0000386 ! macula
relationship: develops_from ZFA:0000558 ! posterior macula
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000559 ! otolith organ
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0000235
name: magnocellular superficial pretectal nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-164
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000687 ! superficial pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000236
name: mandibular muscle
namespace: zebrafish_anatomy
synonym: "mandibular muscles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-165
is_a: ZFA:0005145 ! muscle
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001307 ! pharyngeal musculature
relationship: part_of ZFA:0001612 ! pharyngeal arch 1
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000237
name: medial forebrain bundle diencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-167
is_a: ZFA:0000338 ! diencephalic tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005111 ! medial forebrain bundle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000238
name: medial olfactory tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-168
is_a: ZFA:0000597 ! telencephalic tracts
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000239
name: mesocoracoid bone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-171
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001537 ! mesocorocoid cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0000240
name: metapterygoid
namespace: zebrafish_anatomy
def: "The metapterygoid is a posterior bone that ossifies in the cartilaginous palatoquadrate arch. It first appears as a rod of bone with an anterodorsally projecting process from the middle of the dorsal surface (6.4 mm). The adult metapterygoid is roughly rectangular in shape with rounded corners and an anterodorsally projecting spine that meets the entopterygoid medially in a synostosis at its posteromedial edge. The posterior end curves dorsally to form the posteroventral surface of the orbit." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-172
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001272 ! palatoquadrate arch
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0000241
name: midline column
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-173
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000421 ! reticular formation
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000242
name: male organism
namespace: zebrafish_anatomy
def: "Gonochoristic organism that can produce male gametes." [ZFIN:curator]
xref: CARO:0000027
xref: ZFIN:ZDB-ANAT-061101-3
is_a: ZFA:0001094 ! whole organism
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0000243
name: neuromast
namespace: zebrafish_anatomy
def: "Volcano-shaped lateral line sensory organ located in characteristic positions within the skin epithelium and containing hair cells and their support elements. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "lateral line neuromast" RELATED []
synonym: "neuromasts" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-175
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000034 ! lateral line system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000244
name: nucleus Edinger-Westphal
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-176
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000245
name: nucleus of the descending root
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-177
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000433 ! sensory trigeminal nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000246
name: nucleus taeniae
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-178
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000505 ! dorsal telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000247
name: cranial nerve VIII
namespace: zebrafish_anatomy
synonym: "auditory nerve" RELATED []
synonym: "CN-VIII" RELATED []
synonym: "octaval nerve" RELATED []
synonym: "statoacoustic nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-179
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000248
name: magnocellular preoptic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-18
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000470 ! preoptic area
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000249
name: cranial nerve I
namespace: zebrafish_anatomy
synonym: "CN-I" RELATED []
synonym: "olfactory nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-180
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001149 ! olfactory system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000250
name: opercle
namespace: zebrafish_anatomy
synonym: "opercles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-181
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000555 ! opercular flap
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001401 ! dorsal hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000251
name: opercular-branchiostegal series
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-182
is_obsolete: true
[Term]
id: ZFA:0000252
name: optic tract
namespace: zebrafish_anatomy
def: "Axon tract which is comprised of retinal ganglion cell axons after which they have passed through the optic chiasm." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-183
is_a: ZFA:0000338 ! diencephalic tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000253
name: orbitosphenoid
namespace: zebrafish_anatomy
def: "Large median unpaired cartilage bone consisting of two diverging plates. Positioned medial to the eye. The orbitosphenoid develops from the Trabeculae communis and forms the anterior and anterolateral boundary of the orbital foramen and constitutes a significant part of the sidewalls and floor of the cranial cavity. Bordered by the lateral ethmoid anteriorly, and the pterosphenoid posteriorly, The orbitosphenoid may extend ventrally to meet the parasphenoid. In the adult, the orbitosphenoid is fused ventrally to the parasphenoid via a thin sheet of bone." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-184
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001505 ! taenia marginalis anterior
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000290 ! sphenoid region
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000254
name: pancreas primordium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-185
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001371 ! pancreatic system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000255
name: paraxial mesoderm
namespace: zebrafish_anatomy
alt_id: ZFA:0000942
def: "Mesoderm which is lateral to the neural tube on both sides." [ZFIN:curator]
synonym: "paraxial mesenchyme" RELATED []
xref: ZFIN:ZDB-ANAT-011113-186
is_a: ZFA:0000081 ! trunk mesenchyme
relationship: develops_from ZFA:0000591 ! presumptive paraxial mesoderm
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000041 ! mesoderm
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000256
name: pars subcommissuralis of V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-187
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000304 ! ventral telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000257
name: pectoral fin cartilage
namespace: zebrafish_anatomy
def: "Cartilage which is part of the pectoral fin." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-188
is_a: ZFA:0001543 ! paired fin cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000943 ! pectoral fin skeleton
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000258
name: pelvic fin musculature
namespace: zebrafish_anatomy
synonym: "pelvic fins" RELATED []
xref: ZFIN:ZDB-ANAT-011113-189
is_a: ZFA:0000207 ! fin musculature
relationship: develops_from ZFA:0001449 ! mesenchyme pelvic fin
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001184 ! pelvic fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000259
name: mandibular lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-19
is_a: ZFA:0001469 ! lateral line
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001470 ! anterior lateral line
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000260
name: periventricular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-190
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000707 ! ventral zone
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000261
name: pharyngohyoid
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-191
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000262
name: posterior semicircular canal
namespace: zebrafish_anatomy
alt_id: ZFA:0000483
def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)" [ZFIN:curator]
synonym: "caudal vertical semicircular canal" RELATED []
synonym: "posterior semicircular canals" RELATED []
synonym: "posterior semicircular duct" RELATED []
xref: ZFIN:ZDB-ANAT-011113-192
relationship: develops_from ZFA:0000412 ! posterior semicircular canal primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000431 ! semicircular canal
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000263
name: precaudal vertebra
namespace: zebrafish_anatomy
def: "Post-Weberian vertebrae lacking hemal spines (Weitzman, 1962), refers generally to the anterior vertebral region bounding the abdominal cavity. Alternate but not quite synonymous terms are abdominal or trunk vertebrae, which bear parapophyses and ribs. In many actinopterygians dorsal to the posterior abdominal cavity there are transitional vertebrae lacking ribs but also without hemal spines or sometimes even enclosed hemal arches. The primary definition would identify these vertebrae as precaudal. Bird and Mabee, 2003." [ZFIN:curator]
synonym: "abdominal vertebrae" RELATED []
synonym: "precaudal vertebrae" RELATED PLURAL []
synonym: "trunk vertebrae" RELATED []
xref: ZFIN:ZDB-ANAT-011113-193
is_a: ZFA:0001189 ! vertebra
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001115 ! trunk
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000264
name: preopercle
namespace: zebrafish_anatomy
synonym: "preopercles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-194
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000555 ! opercular flap
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001401 ! dorsal hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000265
name: presumptive dorsal mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-195
relationship: end ZFS:0000019 ! Gastrula:Shield
relationship: part_of ZFA:0001377 ! presumptive mesoderm
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000266
name: pretecto-mamillary tract
namespace: zebrafish_anatomy
synonym: "pretectomamillary tract" RELATED []
xref: ZFIN:ZDB-ANAT-011113-196
is_a: ZFA:0000338 ! diencephalic tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000267
name: primary olfactory fiber layer
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-197
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000402 ! olfactory bulb
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000268
name: anal fin proximal radial
namespace: zebrafish_anatomy
def: "Rod-like internal median skeletal support bones of the anal fin, which articulate with the distal radials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-199
is_a: ZFA:0001646 ! anal fin radial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001420 ! anal fin pterygiophore
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000269
name: inferior ventral flexor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-2
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000628 ! caudal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000270
name: maxilla
namespace: zebrafish_anatomy
def: "The dermal maxilla forms part of the upper jaw. It is first visible as a small dorsoventrally oriented rod of bone in the lateral region of the upper jaw. Through anterior ossification it becomes S-shaped, with its anteriormost tip directed medially (4.8 mm NL). The posteroventral end of the maxilla is connected to the dentary by a ligament. Maxillary teeth are absent in cypriniforms, but are present in other ostariophysans. . Two barbels are present on the maxilla. The presence of two pairs of maxillary barbels is considered by Cavender and Coburn (1992) to be the primitive condition for the Cyprinidae." [ZFIN:curator]
synonym: "maxillae" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-20
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001272 ! palatoquadrate arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000271
name: radial
namespace: zebrafish_anatomy
synonym: "radials" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-200
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000272
name: respiratory system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-201
is_a: ZFA:0001439 ! anatomical system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000274
name: rostral octaval nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-204
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000401 ! octaval nerve sensory nucleus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000275
name: rostral tegmental nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-205
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000276
name: rostrolateral thalamic nucleus of Butler & Saidel
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-206
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000458 ! ventral thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000277
name: scale
namespace: zebrafish_anatomy
synonym: "scales" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-207
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001183 ! dermal superficial region
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0000278
name: secondary gustatory nucleus medulla oblongata
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-208
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000279
name: segmental plate
namespace: zebrafish_anatomy
def: "Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995." [ZFIN:curator]
synonym: "presomitic mesoderm" RELATED []
synonym: "PSM" RELATED []
xref: ZFIN:ZDB-ANAT-011113-209
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000255 ! paraxial mesoderm
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000280
name: medial division
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-21
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000603 ! valvula cerebelli
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000281
name: hair cell posterior macula
namespace: zebrafish_anatomy
def: "Specialized neuronal receptor cells of the lateral line and acoustico-vestibular systems. Kimmel et al, 1995. (Also see Anatomical Atlas entry for hair cells by T. Whitfield.)" [ZFIN:curator]
synonym: "sensory hair cells posterior macula" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-210
is_a: ZFA:0009366 ! hair cell
relationship: develops_from ZFA:0001099 ! immature hair cell posterior macula
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000558 ! posterior macula
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000282
name: sensory system
namespace: zebrafish_anatomy
synonym: "sensory systems" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-211
is_a: ZFA:0001439 ! anatomical system
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000396 ! nervous system
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000283
name: sternohyoid
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-212
is_a: ZFA:0000236 ! mandibular muscle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000284
name: subopercle
namespace: zebrafish_anatomy
synonym: "subopercles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-213
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000555 ! opercular flap
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001401 ! dorsal hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000285
name: superficial adductor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-214
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000563 ! pectoral fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000286
name: superficial lateralis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-215
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000473 ! trunk musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000287
name: superior dorsal flexor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-216
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000628 ! caudal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000288
name: supracarinalis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-217
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000473 ! trunk musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000289
name: supramaxillae
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-218
is_obsolete: true
[Term]
id: ZFA:0000290
name: sphenoid region
namespace: zebrafish_anatomy
def: "Chondrocranium bone which together form the floor and sidewalls of the middle part of the chondrocranium." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-219
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001424 ! chondrocranium
relationship: part_of ZFA:0001580 ! neurocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000291
name: medial octavolateralis nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-22
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000381 ! lateral line sensory nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000292
name: surface structure
namespace: zebrafish_anatomy
def: "Organism subdivision which is the collection of anatomical structures on the body surface." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-220
is_a: ZFA:0001308 ! organism subdivision
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000293
name: synencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-221
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000294
name: torus lateralis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-222
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000295
name: trigeminal ganglion
namespace: zebrafish_anatomy
def: "A prominent collection of touch-sensory neurons of the trigeminal or fifth cranial nerve, positioned beside the brain between the eye and the ear. Kimmel et al, 1995." [ZFIN:curator]
synonym: "gV" RELATED []
synonym: "trigeminal ganglia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-223
is_a: ZFA:0000013 ! cranial ganglion
relationship: develops_from ZFA:0000162 ! trigeminal placode
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000296
name: uncrossed tecto-bulbar tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-225
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000297
name: motor nucleus of vagal nerve
namespace: zebrafish_anatomy
alt_id: ZFA:0000387
synonym: "motor nucleus X" RELATED []
synonym: "nucleus motorius of nervi vagi" RELATED []
synonym: "nX" RELATED []
synonym: "vagal lobe" RELATED []
xref: ZFIN:ZDB-ANAT-011113-226
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000298
name: vent
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-227
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000299
name: ventral entopeduncular nucleus V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-228
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000304 ! ventral telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000300
name: ventral hypohyal
namespace: zebrafish_anatomy
def: "The ventral hypohyal ossifies first along the anteroventral tip of the ceratohyal cartilage at the insertion of the tendon from the sternohyoideus (5.7 mm)." [ZFIN:curator]
synonym: "lower hypohyal" RELATED []
synonym: "ventrohyal" RELATED []
xref: ZFIN:ZDB-ANAT-011113-229
is_a: ZFA:0001381 ! hypohyal
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000301
name: medial rectus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-23
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000511 ! extraocular musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000302
name: ventral nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-230
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000213 ! habenula
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000303
name: female organism
namespace: zebrafish_anatomy
def: "Gonochoristic organism that can produce female gametes." [ZFIN:curator]
xref: CARO:0000028
xref: ZFIN:ZDB-ANAT-061101-4
is_a: ZFA:0001094 ! whole organism
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0000304
name: ventral telencephalon
namespace: zebrafish_anatomy
synonym: "subpallium" RELATED []
xref: ZFIN:ZDB-ANAT-011113-232
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000079 ! telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000305
name: ventral sulcus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-233
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000032 ! hypothalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000306
name: ventrolateral thalamic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-234
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000458 ! ventral thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000307
name: vestibulolateralis lobe
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-235
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000100 ! cerebellum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000308
name: prevomer
namespace: zebrafish_anatomy
def: "A thin medial unpaired dermal bone that is kite or paddle-shape. Underlying the ethmoid, and slightly overlapping the parasphenoid posteriorly, the prevomer bears an anterolateral projection that terminates in a concave depression in which the preethmoids sit." [ZFIN:curator]
synonym: "vomer" RELATED [ZFIN:ZDB-PUB-961014-192]
xref: ZFIN:ZDB-ANAT-011113-236
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000351 ! olfactory region
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0000309
name: E-YSL
namespace: zebrafish_anatomy
def: "The portion of the YSL that is outside of the blastoderm margin during epiboly. Kimmel et al, 1995." [ZFIN:curator]
synonym: "external yolk syncytial layer" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-011113-237
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: part_of ZFA:0000088 ! YSL
relationship: start ZFS:0000013 ! Blastula:Oblong
[Term]
id: ZFA:0000310
name: cranial nerve VI
namespace: zebrafish_anatomy
synonym: "abducens nerve" RELATED []
synonym: "CN-VI" RELATED []
xref: ZFIN:ZDB-ANAT-011113-238
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000311
name: adductor mandibulae complex
namespace: zebrafish_anatomy
def: "Is a mandibular muscle that consists of three subdivisions A1, A2, and A3. All three originate on the hyomandibula and suspensorium but each has a distinct instertion. A1 inserts on the maxilla, A2 inserts along the caudal margin of the articular and A3 inserts on teh medial surface of the articular. See ZDB-PUB-070330-4." [ZFIN:curator]
synonym: "adductor mandibulae" RELATED []
xref: ZFIN:ZDB-ANAT-011113-239
relationship: develops_from ZFA:0007049 ! adductor mandibulae
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0000312
name: mesencephalic nucleus of trigeminal nerve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-24
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000433 ! sensory trigeminal nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000313
name: anal inclinator
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-240
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001154 ! anal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000314
name: anterior semicircular canal
namespace: zebrafish_anatomy
alt_id: ZFA:0000675
def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)" [ZFIN:curator]
synonym: "anterior semicircular canals" RELATED []
synonym: "anterior semicircular duct" RELATED []
synonym: "rostral vertical semicircular canal" RELATED []
xref: ZFIN:ZDB-ANAT-011113-241
relationship: develops_from ZFA:0000469 ! anterior semicircular canal primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000431 ! semicircular canal
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000315
name: asteriscus
namespace: zebrafish_anatomy
synonym: "lagenar otolith" RELATED []
xref: ZFIN:ZDB-ANAT-011113-242
is_a: ZFA:0001617 ! otolith
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000374 ! lagena
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000316
name: basihyal
namespace: zebrafish_anatomy
def: "The basihyal is the 'tongue' of the a fish, the median and anteriorly projecting element of the ventral hyoid arch.Ossification of the cartilaginous basihyal is first visible at the posterior end of the club-shaped basihyal cartilage (6.0 mm). Ossification spreads throughout the cartilage, except for the anterior tip, which remains cartilaginous. The posteroventral tip extends between the left and right dorsal hypohyals." [ZFIN:curator]
synonym: "basihyoid" RELATED []
synonym: "glossohyal" RELATED []
xref: ZFIN:ZDB-ANAT-011113-243
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001510 ! basihyal cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001402 ! ventral hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000317
name: postcranial axial skeleton
namespace: zebrafish_anatomy
def: "The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins." [ZFIN:curator]
synonym: "axial skeleton" RELATED []
xref: ZFIN:ZDB-ANAT-011113-244
is_a: ZFA:0000434 ! skeletal system
relationship: develops_from ZFA:0001080 ! sclerotome
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000318
name: brain stem/spinal tract and commissures
namespace: zebrafish_anatomy
synonym: "brain stem/spinal tracts and commissures" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-245
is_a: ZFA:0000145 ! CNS tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000319
name: branchiostegal membrane
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-246
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000320
name: caudal commissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-247
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000293 ! synencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000321
name: caudal levator
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-248
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000322
name: caudal octaval nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-249
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000401 ! octaval nerve sensory nucleus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000323
name: mesethmoid bone
namespace: zebrafish_anatomy
def: "Median unpaired cartilage bone that ossifies as a perichondral lamellae ensheathing the nasal septum anterodorsally and laterally (Harrington, 1955). In adult D. rerio, the center of the mesethmoid remains cartilaginous (Cubbage & Mabee, 1996). The mesethmoid meets the supraethmoid dorsally, the lateral ethmoids posterolaterally, and the vomer and parasphenoid ventrally in synostoses. Anterolaterally the mesthmoid meets the preethmoids in synchondroses." [ZFIN:curator]
synonym: "ethmoid bone" RELATED []
xref: ZFIN:ZDB-ANAT-011113-25
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001321 ! neurocranial trabecula
relationship: develops_from ZFA:0001405 ! ethmoid cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000351 ! olfactory region
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0000324
name: caudal periventricular hypothalamus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-250
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000634 ! caudal zone
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000325
name: caudal thalamic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-251
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000326
name: caudal vertebra
namespace: zebrafish_anatomy
def: "Vertebrae bearing a hemal arch and spine. The most posterior caudal vertebrae support the caudal fin and are referred to as preural vertebrae. " [ZFIN:curator]
synonym: "caudal vertebrae" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-252
is_a: ZFA:0001189 ! vertebra
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000327
name: central zone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-254
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000328
name: cephalic musculature
namespace: zebrafish_anatomy
synonym: "head muscles" RELATED []
xref: ZFIN:ZDB-ANAT-011113-255
is_a: ZFA:0000548 ! musculature system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000329
name: chorion
namespace: zebrafish_anatomy
def: "The egg shell. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-256
is_a: ZFA:0000020 ! extraembryonic structure
relationship: end ZFS:0000032 ! Pharyngula:High-pec
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0000330
name: cloacal chamber
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-257
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000112 ! gut
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000331
name: commissure infima of Haller
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-258
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000332
name: coracoid
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-259
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001455 ! scapulocorocoid
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0000333
name: mesovarium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-26
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000403 ! ovary
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000334
name: corpus mamillare
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-260
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000335
name: crossed tecto-bulbar tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-261
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000336
name: hypural arches
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-262
is_obsolete: true
[Term]
id: ZFA:0000337
name: dermopalatine
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-263
is_obsolete: true
[Term]
id: ZFA:0000338
name: diencephalic tracts and commissures
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-264
is_a: ZFA:0000145 ! CNS tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000339
name: digestive system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-265
is_a: ZFA:0001439 ! anatomical system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000340
name: dorsal entopeduncular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-266
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000304 ! ventral telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000341
name: dorsal flexor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-267
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000628 ! caudal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000342
name: dorsal inclinator
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-268
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000648 ! dorsal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000343
name: dorsal nucleus of V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-269
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000304 ! ventral telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000344
name: middle lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-27
is_a: ZFA:0001469 ! lateral line
relationship: develops_from ZFA:0005118 ! middle lateral line primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001470 ! anterior lateral line
relationship: part_of ZFA:0005114 ! middle lateral line system
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0000345
name: dorsal rectus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-270
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000511 ! extraocular musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000346
name: dorsal tegmental nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-271
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000347
name: dorsal zone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-272
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000032 ! hypothalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000348
name: duodenum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-273
is_obsolete: true
[Term]
id: ZFA:0000349
name: epaxialis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-274
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000473 ! trunk musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000350
name: epipleural
namespace: zebrafish_anatomy
def: "Epipleurals lie below the horizontal septum and are posteroventrally directed. There are ossified epipleurals in certain ostariophysans. In many lower elopocephalan teleosts including ostariophysans the epipleural bones develop an anterodorsal branch so that they are forked proximally." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-275
is_a: ZFA:0000526 ! intermuscular bone
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000351
name: olfactory region
namespace: zebrafish_anatomy
synonym: "ethmoid region" RELATED []
xref: ZFIN:ZDB-ANAT-011113-276
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001424 ! chondrocranium
relationship: part_of ZFA:0001580 ! neurocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000352
name: external cellular layer
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-277
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000402 ! olfactory bulb
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000353
name: fasciculus retroflexus
namespace: zebrafish_anatomy
synonym: "habenulointerpeduncular tract" RELATED []
xref: ZFIN:ZDB-ANAT-011113-278
is_a: ZFA:0000338 ! diencephalic tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000354
name: gill
namespace: zebrafish_anatomy
synonym: "gills" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-279
is_a: ZFA:0000496 ! compound organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000272 ! respiratory system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000355
name: roof plate midbrain
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-28
is_a: ZFA:0007058 ! roof plate
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000128 ! midbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000356
name: gill raker
namespace: zebrafish_anatomy
def: "Gill rakers are small anterior projections present on all of the branchial arches." [ZFIN:curator]
synonym: "gill rakers" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-280
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: part_of ZFA:0000354 ! gill
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000357
name: glomerular layer
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-281
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000402 ! olfactory bulb
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000358
name: granular layer corpus cerebelli
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-282
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000188 ! corpus cerebelli
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000359
name: habenular commissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-283
is_a: ZFA:0000338 ! diencephalic tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000360
name: heart tube
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-284
relationship: develops_from ZFA:0000149 ! primitive heart tube
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000362
name: hypaxialis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-287
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000473 ! trunk musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000363
name: hypobranchial bone
namespace: zebrafish_anatomy
def: "Hypobranchials are the most medial of the bilaterally paired elements of the gill arches. Hypobranchial ossifications 1-3 (of 4) develop in the small hypobranchial cartilages that lie between the medial tips of the ceratobranchials and copula 2. The hypobranchials articulate anteromedially with the basibranchials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-288
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001522 ! hypobranchial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000364
name: hypural
namespace: zebrafish_anatomy
def: "Expanded and laterally flattened hemal arches and spines. They support the lepidotrichia of the caudal fin. The hypurals form ventral to the posterior tip of the dorsally-flexed notochord. In zebrafish condensations of the hypurals begin forming at approximately 6 dpf (4.1 mm NL, notochord length). Mabee and Bird, 2001." [ZFIN:curator]
synonym: "hyp" RELATED []
synonym: "hypuralia" RELATED []
synonym: "hypurals" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-289
is_a: ZFA:0000859 ! specialized hemal arch and spine
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000365
name: nasal bone
namespace: zebrafish_anatomy
def: "Paired dermal bones, likened to a bone tube, positioned lateral to the supraethmoid. Nasal bones are transversed by the anterior most part of the supraorbital canals and bear one neuromast foramen in zebrafish Cubbage and Mabee, 1996." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-29
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000351 ! olfactory region
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0000366
name: inferior raphe nucleus
namespace: zebrafish_anatomy
synonym: "posterior raphe nucleus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-290
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001429 ! raphe nucleus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000367
name: infraorbital bridge
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-291
is_obsolete: true
[Term]
id: ZFA:0000368
name: integument
namespace: zebrafish_anatomy
def: "The outer protective barrier that separates the animal from its aquatic environment. Le Guellec et al, 2004." [ZFIN:curator]
synonym: "skin" RELATED []
xref: ZFIN:ZDB-ANAT-011113-292
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000369
name: intermandibularis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-293
is_a: ZFA:0000236 ! mandibular muscle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000370
name: intermediate thalamic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-294
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000458 ! ventral thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000371
name: internal pharyngoclavicularis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-295
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000372
name: interpeduncular nucleus medulla oblongata
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-296
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000373
name: juvenile
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-297
is_obsolete: true
[Term]
id: ZFA:0000374
name: lagena
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-298
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000559 ! otolith organ
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000375
name: last preural centrum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-299
is_obsolete: true
[Term]
id: ZFA:0000376
name: infraorbital
namespace: zebrafish_anatomy
alt_id: ZFA:0000489
def: "A dermatocranium bone which is a series of plate-like dermal bones containing the infraorbital lateral line canal under and posterior to the eye (completely surrounding the eye in primitive bony fishes)." [ZFIN:curator]
synonym: "circumorbital series" RELATED []
synonym: "infraorbital series" RELATED []
xref: ZFIN:ZDB-ANAT-011113-3
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001410 ! orbital region
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0000379
name: lateral forebrain bundle diencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-301
is_a: ZFA:0000338 ! diencephalic tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0007012 ! lateral forebrain bundle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000380
name: lateral lemniscus nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-302
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000381
name: lateral line sensory nuclei
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-303
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000382
name: acellular anatomical structure
namespace: zebrafish_anatomy
def: "Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue." [ZFIN:curator]
xref: CARO:0000040
xref: ZFIN:ZDB-ANAT-061101-5
is_a: ZFA:0000037 ! anatomical structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0000383
name: lateral rectus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-305
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000511 ! extraocular musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000384
name: levator arcus palatini
namespace: zebrafish_anatomy
def: "Is a mandibular muscle that inserts along the dorsolateral faces of the hyosymplectics. See ZDB-PUB-020703-2." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-307
relationship: develops_from ZFA:0007050 ! constrictor dorsalis
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000385
name: lymphatic system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-308
is_a: ZFA:0000010 ! cardiovascular system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000386
name: macula
namespace: zebrafish_anatomy
def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator]
synonym: "maculae" RELATED PLURAL []
synonym: "sensory patch" RELATED []
xref: ZFIN:ZDB-ANAT-011113-309
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000217 ! inner ear
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000388
name: medial caudal lobe
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-311
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000307 ! vestibulolateralis lobe
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000389
name: medial funicular nucleus medulla oblongata
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-312
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000390
name: medial preglomerular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-313
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000391
name: medial zone of D
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-314
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000505 ! dorsal telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000392
name: median tuberal portion
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-315
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000032 ! hypothalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000393
name: mesenchyme
namespace: zebrafish_anatomy
def: "A mesh-like cell arrangement, less compact than an epithelium. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-316
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000394
name: molecular layer corpus cerebelli
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-317
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000188 ! corpus cerebelli
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000395
name: muscle pioneer somite 2
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 2" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-318
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000843 ! slow muscle cell somite 2
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000396
name: nervous system
namespace: zebrafish_anatomy
def: "A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS). (Source: BioGlossary, www.Biology-Text.com)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-319
is_a: ZFA:0001439 ! anatomical system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000397
name: nucleus subglomerulosis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-32
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000398
name: nucleus isthmi
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-320
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000399
name: secondary gustatory nucleus trigeminal nuclei
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-321
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000433 ! sensory trigeminal nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000400
name: occipital lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "supratemporal lateral line" RELATED []
xref: ZFIN:ZDB-ANAT-011113-322
is_a: ZFA:0001469 ! lateral line
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001470 ! anterior lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000401
name: octaval nerve sensory nucleus
namespace: zebrafish_anatomy
synonym: "octaval nerve sensory nuclei" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-323
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000402
name: olfactory bulb
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-324
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000079 ! telencephalon
relationship: part_of ZFA:0001149 ! olfactory system
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000403
name: ovary
namespace: zebrafish_anatomy
def: "Female reproductive organ." [ZFIN:curator]
synonym: "ovaries" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-328
is_a: ZFA:0000413 ! gonad
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000303 ! female organism
relationship: part_of ZFA:0001158 ! endocrine system
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0000404
name: paracommissural nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-329
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000293 ! synencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000405
name: cranial nerve III
namespace: zebrafish_anatomy
synonym: "CN-III" RELATED []
synonym: "occulomotor" RELATED []
synonym: "oculomotor nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-33
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000406
name: parvocellular superficial pretectal nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-330
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000687 ! superficial pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000407
name: pectoral girdle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-331
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000943 ! pectoral fin skeleton
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000408
name: periventricular nucleus of caudal tuberculum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-333
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000410
name: postcleithrum
namespace: zebrafish_anatomy
def: "Dermal bone that is part of the pectoral girdle and located ventral to the supracleithrum and posterior to the cleithrum. Postcleithral bones are paired and can vary up in number from a single pair (such as in zebrafish) to three pairs in other teleosts." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-335
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000411
name: posterior crista primordium
namespace: zebrafish_anatomy
synonym: "posterior crista primordia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-336
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0000262 ! posterior semicircular canal
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000412
name: posterior semicircular canal primordium
namespace: zebrafish_anatomy
synonym: "posterior semicircular canal primordia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-337
relationship: end ZFS:0000032 ! Pharyngula:High-pec
relationship: part_of ZFA:0000431 ! semicircular canal
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000413
name: gonad
namespace: zebrafish_anatomy
def: "The part of the reproductive system that produces and releases eggs (ovary) or sperm (testis)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-1
is_a: ZFA:0001490 ! cavitated compound organ
relationship: develops_from ZFA:0001262 ! gonad primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000632 ! reproductive system
relationship: part_of ZFA:0001438 ! coelom
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0000414
name: presumptive cephalic mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-339
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000041 ! mesoderm
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000415
name: esophageal sphincter
namespace: zebrafish_anatomy
synonym: "oesophagial sphincter" RELATED []
xref: ZFIN:ZDB-ANAT-011113-34
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000416
name: presumptive endoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-340
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000019 ! Gastrula:Shield
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000417
name: presumptive spinal cord
namespace: zebrafish_anatomy
synonym: "presumptive spinal cord neural keel" RELATED []
synonym: "presumptive spinal cord neural plate" RELATED []
synonym: "presumptive spinal cord neural rod" RELATED []
xref: ZFIN:ZDB-ANAT-011113-343
relationship: end ZFS:0000020 ! Gastrula:75%-epiboly
relationship: part_of ZFA:0007015 ! posterior presumptive neural plate
relationship: start ZFS:0000019 ! Gastrula:Shield
[Term]
id: ZFA:0000418
name: pretectum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-344
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000419
name: pterosphenoid
namespace: zebrafish_anatomy
def: "Paired cartilage bones, flat and hexagonal in shape that contact the orbitosphenoid anteriorly. Roofed by the frontal and bordered posteriorly by the prootic and sphenotic, the pterosphenoid bears foramina that accommodate branches of the trigeminal and facial nerves." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-345
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001515 ! taenia marginalis posterior
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000290 ! sphenoid region
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000420
name: renal artery
namespace: zebrafish_anatomy
synonym: "renal arteries" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-346
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000421
name: reticular formation
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-347
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000422
name: retroarticular
namespace: zebrafish_anatomy
def: "The retroarticular is a cartilage bone that forms at the posteroventral tip of Meckel's cartilage where the interoperculomandibular ligament attaches (5.1 mm NL). In the adult it is basically triangular in shape. The retroarticular is ligamentously connected to the interopercle and preopercle posteriorly and abuts the ventral shelf of the dentary anteriorly." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-348
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001205 ! Meckel's cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001273 ! ventral mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000423
name: anterior cardinal vein
namespace: zebrafish_anatomy
synonym: "ACV" RELATED []
synonym: "rostral cardinal veins" RELATED []
xref: ZFIN:ZDB-ANAT-011113-349
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000096 ! cardinal system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000424
name: opercular lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-35
is_a: ZFA:0001469 ! lateral line
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001470 ! anterior lateral line
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0000425
name: anterior lateral line nerve
namespace: zebrafish_anatomy
def: "Cranial nerve which enters the brain between cranial nerves VI and VII; contains afferents and sensory efferents to the anterior lateral line ganglia." [ZFIN:curator]
synonym: "rostral lateral line nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-350
is_a: ZFA:0000641 ! cranial nerve
is_a: ZFA:0001479 ! lateral line nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001468 ! anterior lateral line system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000426
name: rostral parvocellular preoptic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-351
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000470 ! preoptic area
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000427
name: rostral thalamic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-352
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000653 ! dorsal thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000428
name: saccule
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-353
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000559 ! otolith organ
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000429
name: scaphium
namespace: zebrafish_anatomy
def: "The scaphium is a modification of NA 1 in which the neural arch is reduced and fused to a cup-shaped ossification of membrane bone, the concha. The second Weberian ossicle, consisting of three parts: the concha, the ascending process, and the articulating process." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-354
is_a: ZFA:0001066 ! neural arch
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000461 ! Weberian ossicle
relationship: part_of ZFA:0001167 ! vertebra 1
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0000430
name: secondary gustatory tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-355
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000431
name: semicircular canal
namespace: zebrafish_anatomy
def: "Fluid-filled toroidal spaces, arranged orthogonally to each other in the ear, that detect angular accelerations. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)" [ZFIN:curator]
synonym: "scc" RELATED []
synonym: "semicircular canals" RELATED PLURAL []
synonym: "semicircular duct" RELATED []
xref: ZFIN:ZDB-ANAT-011113-356
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000217 ! inner ear
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000433
name: sensory trigeminal nuclei
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-358
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000434
name: skeletal system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-359
is_a: ZFA:0001439 ! anatomical system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000435
name: cranial nerve II
namespace: zebrafish_anatomy
def: "Cranial nerve which is comprised of retinal ganglion cell axons running posterior medially towards the optic chiasm, at which some of the axons cross the midline and after which the structure is termed the optic tract." [ZFIN:curator]
synonym: "CN-II" RELATED []
synonym: "optic" RELATED []
synonym: "optic nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-36
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000338 ! diencephalic tracts and commissures
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000436
name: spleen
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-360
is_a: ZFA:0000496 ! compound organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000339 ! digestive system
relationship: part_of ZFA:0001159 ! immune system
relationship: part_of ZFA:0001438 ! coelom
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000437
name: stomach
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-361
is_obsolete: true
[Term]
id: ZFA:0000438
name: parhypural
namespace: zebrafish_anatomy
alt_id: ZFA:0000562
def: "Hemal arch and spine of preural centrum 1. The parhypural is defined as the most posterior hemal arch with an open canal through which the ventral aorta passes. Mabee and Bird, 2001." [ZFIN:curator]
synonym: "parhyural" RELATED []
synonym: "phy" RELATED []
xref: ZFIN:ZDB-ANAT-011113-363
is_a: ZFA:0000859 ! specialized hemal arch and spine
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000557 ! preural 1 vertebra
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0000439
name: superficial pelvic abductor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-364
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000258 ! pelvic fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000440
name: superior raphe nucleus
namespace: zebrafish_anatomy
synonym: "anterior raphe nucleus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-365
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001429 ! raphe nucleus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000441
name: suprachiasmatic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-366
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000183 ! central pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000442
name: supraneural
namespace: zebrafish_anatomy
def: "Supraneurals independent, median, elongate, rod-like cartilages or bones in the dorsal skeletogenous septum between the cranium and the dorsal fin. In actinopterygians, supraneurals develop from cartilages that are independent of the neural spine (Arratia et al., 2001)." [ZFIN:curator]
synonym: "sn" RELATED []
xref: ZFIN:ZDB-ANAT-011113-367
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000317 ! postcranial axial skeleton
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0000443
name: supraorbital lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-368
is_a: ZFA:0001469 ! lateral line
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001470 ! anterior lateral line
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0000444
name: suspensorium
namespace: zebrafish_anatomy
synonym: "hyopalatine" RELATED []
synonym: "suspensoria" RELATED []
xref: ZFIN:ZDB-ANAT-011113-369
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001216 ! splanchnocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000445
name: optic tectum
namespace: zebrafish_anatomy
def: "The roof of the midbrain, morphologically visible by the end of the segmentation period. Kimmel et al, 1995." [ZFIN:curator]
synonym: "dorsal midbrain" RELATED []
synonym: "tectal lobe" RELATED []
synonym: "tectum" RELATED [ZFIN:ZDB-PUB-961014-576]
synonym: "tectum opticum" RELATED []
xref: ZFIN:ZDB-ANAT-011113-37
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001353 ! mesencephalic tectum
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000446
name: tecto-bulbar tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-370
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000447
name: tela chorioidea
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-371
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000696 ! telencephalic ventricle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000448
name: tertiary gustatory nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-372
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000449
name: torus longitudinalis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-373
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001353 ! mesencephalic tectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000450
name: trochlear motor nucleus
namespace: zebrafish_anatomy
synonym: "motor nucleus IV" RELATED []
synonym: "nIV" RELATED []
xref: ZFIN:ZDB-ANAT-011113-374
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000451
name: upper oral valve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-375
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000695 ! labial cavities
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000452
name: urohyal
namespace: zebrafish_anatomy
def: "The urohyal is a median dermal bone that ossifies in the membrane between the paired sternohyoideus muscles ventral to the anterior end of copula 1. It is an unpaired ossification of the tendon of the sternohyoideos muscles in basal teleosts, and it is paired in catfishes (Arratia and Schultze, 1990)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-376
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001402 ! ventral hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000453
name: cranial nerve X
namespace: zebrafish_anatomy
synonym: "CN-X" RELATED []
synonym: "vagal nerve" RELATED []
synonym: "vagus nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-377
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001101 ! gustatory system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000454
name: ventral accessory optic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-378
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000183 ! central pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000455
name: ventral flexor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-379
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000628 ! caudal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000456
name: ventral nucleus of V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-380
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000304 ! ventral telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000457
name: ventral rectus
namespace: zebrafish_anatomy
synonym: "ventral recti" RELATED []
xref: ZFIN:ZDB-ANAT-011113-381
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: part_of ZFA:0000511 ! extraocular musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000458
name: ventral thalamus
namespace: zebrafish_anatomy
synonym: "prethalamus" RELATED [ZFIN:ZDB-PUB-060207-11]
xref: ZFIN:ZDB-ANAT-011113-382
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001215 ! thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000459
name: ventromedial thalamic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-384
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000458 ! ventral thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000460
name: Mauthner axon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-386
is_obsolete: true
[Term]
id: ZFA:0000461
name: Weberian ossicle
namespace: zebrafish_anatomy
def: "A group of modified neural arches and spines of the first four vertebrae. These include, from anterior to posterior, the claustrum, scaphuium, intercalarium, and tripus. The os suspensorium is considered to be a fifth ossicle. Mabee and Bird, 2001." [ZFIN:curator]
synonym: "Weberian ossicles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-387
is_a: ZFA:0001491 ! solid compound organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001188 ! Weberian apparatus
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0000462
name: abductor hyohyoid
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-388
is_a: ZFA:0000521 ! hyoid muscle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000463
name: adductor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-389
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000464
name: otic lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-39
is_a: ZFA:0001469 ! lateral line
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001470 ! anterior lateral line
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000465
name: adductor operculi
namespace: zebrafish_anatomy
def: "Is a hyoid muscle that moves the auditory capsules with the opercles. See ZDB-PUB-020703-2." [ZFIN:curator]
synonym: "adductor operculae" RELATED []
xref: ZFIN:ZDB-ANAT-011113-390
is_a: ZFA:0000521 ! hyoid muscle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000466
name: anal depressor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-391
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001154 ! anal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000467
name: anguloarticular
namespace: zebrafish_anatomy
def: "The anguloarticular is a compound bone that results of the fusion of the dermal angular and the cartilaginous articular and forms the posterior part of the lower jaw. The dermal part ossifies initially on the posterolateral surface of Meckel's cartilage near the articulation with the quadrate (5.5 mm NL). A posterior process forms, creating a synovial joint with the quadrate." [ZFIN:curator]
synonym: "articular" RELATED []
xref: ZFIN:ZDB-ANAT-011113-392
is_a: ZFA:0001590 ! dermal bone
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001644 ! articular cartilage
relationship: develops_from ZFA:0001645 ! angular bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001273 ! ventral mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000468
name: anterior crista primordium
namespace: zebrafish_anatomy
synonym: "anterior crista primordia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-393
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0000314 ! anterior semicircular canal
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000469
name: anterior semicircular canal primordium
namespace: zebrafish_anatomy
synonym: "anterior semicircular canal primordia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-394
relationship: end ZFS:0000032 ! Pharyngula:High-pec
relationship: part_of ZFA:0000431 ! semicircular canal
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000470
name: preoptic area
namespace: zebrafish_anatomy
def: "Area of the forebrain anterior to the posterior tuberculum and the hypothalamus and ventral to the ventral thalamus. See Figure 7, Atlas of Early Zebrafish Brain Development." [ZFIN:curator]
synonym: "area praeoptica" RELATED []
synonym: "area preoptica" RELATED []
synonym: "preoptic region" RELATED []
xref: ZFIN:ZDB-ANAT-011113-395
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000471
name: atrium
namespace: zebrafish_anatomy
def: "One of four heart chambers." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-396
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0000472
name: basioccipital
namespace: zebrafish_anatomy
def: "Large median unpaired cartilage bone that contacts the exocciptal, epiotic and pterotic dorsally, and the parasphenoid anteriorly. Forms the posteroventral hind margin of the cranium, articulates with the centrum of the first vertebra. Bears a posteroventral pharyngeal process that is flattened ventrally and opposes the pharyngeal teeth of the fifth pair of ceratobranchials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-397
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001423 ! parachordal cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001414 ! occipital region
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000473
name: trunk musculature
namespace: zebrafish_anatomy
synonym: "body musculature" RELATED []
xref: ZFIN:ZDB-ANAT-011113-399
is_a: ZFA:0000548 ! musculature system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000474
name: intercalar
namespace: zebrafish_anatomy
def: "Small membrane bone homologous with a cartilage bone in more basal fishes (Patterson, 1977). Situated between the exoccipital and the pterotic at point of attachment of short ligament that originates on the ventral arm of the posttemporal." [ZFIN:curator]
synonym: "opisthotic" RELATED []
xref: ZFIN:ZDB-ANAT-011113-4
is_a: ZFA:0001636 ! membrane bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000189 ! otic region
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000475
name: paraventricular organ
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-40
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000476
name: branchiostegal ray
namespace: zebrafish_anatomy
def: "Branchiostegal rays are thin dermal bones that support the branchiostegal membrane. Three dermal branchiostegal rays form in the branchiostegal membrane ventral to the ceratohyal cartilage. The most posterior ray, branchiostegal 3, ossifies first (3.4 mm NL), and the most anterior ray, branchiostegal 1, ossifies last (5.5 mm NL). The most posterior two branchiostegals (2 and 3) insert externally on the ceratohyal; their anterodorsal tips are thickened triangles, and the rays are expanded. The bifurcated tip of the acinaciform anteriormost ray lies at the ventral margin of the ceratohyal." [ZFIN:curator]
synonym: "branchiostegal rays" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-400
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001402 ! ventral hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000477
name: posterior cardinal vein
namespace: zebrafish_anatomy
def: "Continuation of the caudal vein cranial to the anal pore. The cardinal vein splits into a pair of vessels in the cranial trunk, just caudal to the radix of the aorta. The posterior cardinals each empty into the common cardinal vein. " [ZFIN:curator]
synonym: "axial vein" RELATED []
synonym: "caudal cardinal veins" RELATED []
synonym: "PCV" RELATED []
synonym: "postcardinal vein" RELATED []
xref: ZFIN:ZDB-ANAT-011113-401
is_a: ZFA:0000082 ! vein
relationship: develops_from ZFA:0005077 ! vascular cord
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000096 ! cardinal system
relationship: part_of ZFA:0001073 ! axial vasculature
relationship: part_of ZFA:0005024 ! trunk vasculature
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000479
name: caudal mesencephalo-cerebellar tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-403
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000480
name: caudal octavolateralis nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-404
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000381 ! lateral line sensory nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000481
name: caudal preglomerular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-405
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000482
name: caudal tuberal nucleus
namespace: zebrafish_anatomy
synonym: "posterior tuberal nucleus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-406
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000484
name: celiacomesenteric artery
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-408
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000485
name: central nucleus inferior lobe
namespace: zebrafish_anatomy
synonym: "central nucleus inferior lobes" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-409
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000165 ! inferior lobe
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000486
name: parietal bone
namespace: zebrafish_anatomy
def: "Paired dermal bone that covers the hind part of the cranium, overlapping the dorsal edge of the sphenotic, pterotic, epiotic and the anterior edge of the supraoccipital. The parietal are overlapped anteriorly by the frontal." [ZFIN:curator]
synonym: "post parietal" RELATED []
xref: ZFIN:ZDB-ANAT-011113-41
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000189 ! otic region
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000487
name: central zone of D
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-410
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000505 ! dorsal telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000488
name: ceratobranchial bone
namespace: zebrafish_anatomy
def: "Ceratobranchials are bilaterally paired cartilage bones that form part of the ventral branchial arches. They articulate medially with the hypobranchials and laterally and dorsally with the epibranchials. Ceratobranchials 1-5 ossify in the ceratobranchial cartilages." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-411
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000490
name: commissura cerebelli
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-413
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000100 ! cerebellum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000491
name: commissure of the caudal tuberculum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-414
is_a: ZFA:0000338 ! diencephalic tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000492
name: coracoradialis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-415
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000563 ! pectoral fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000493
name: decussation of medial funicular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-416
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000494
name: deep white zone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-417
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000495
name: infraorbital 5
namespace: zebrafish_anatomy
def: "Plate like dermal bone with usually only one neuromast pore (Nelson, 1969). The last infraorbital bone in the series is referred to as the dermosphenotic (Nelson, 1969). In basal teleosts it is usually the sixth bone in the series but in zebrafish it is the fifth bone." [ZFIN:curator]
synonym: "dermosphenotic" RELATED []
xref: ZFIN:ZDB-ANAT-011113-418
is_a: ZFA:0000376 ! infraorbital
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0000496
name: compound organ
namespace: zebrafish_anatomy
def: "Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types." [ZFIN:curator]
synonym: "organ" RELATED []
xref: CARO:0000024
xref: ZFIN:ZDB-ANAT-061101-6
is_a: ZFA:0000037 ! anatomical structure
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001094 ! whole organism
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000497
name: pelvic adductor profundus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-42
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000258 ! pelvic fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000498
name: dilator operculi
namespace: zebrafish_anatomy
def: "Is a mandibular muscle that inserts along the dorsolateral faces of the opercles. See ZDB-PUB020703-2." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-420
relationship: develops_from ZFA:0007050 ! constrictor dorsalis
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000499
name: dorsal arrector
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-421
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000563 ! pectoral fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000500
name: dorsal erector
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-422
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000648 ! dorsal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000501
name: dorsal funiculus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-423
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000502
name: dorsal motor nucleus trigeminal nerve
namespace: zebrafish_anatomy
synonym: "motor nucleus V" RELATED []
synonym: "nV" RELATED []
xref: ZFIN:ZDB-ANAT-011113-424
is_a: ZFA:0001365 ! trigeminal motor nuclei
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000503
name: dorsal oblique branchial muscle
namespace: zebrafish_anatomy
synonym: "dorsal oblique branchial muscles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-425
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000504
name: dorsal retractor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-426
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000505
name: dorsal telencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-427
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000079 ! telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000506
name: dorsal zone of D
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-428
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000505 ! dorsal telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000507
name: epineural
namespace: zebrafish_anatomy
def: "Some or all epineural bones ossify free from the neural arches in most teleosts. In some lower teleosts, e.g., Leptolepis, Hiodon, elopiforms and albuliforms, ossification proceeds from the attachment point of the ligament to the arch, and the epineural is a process of the neural arch. In many lower teleosts epineurals are forked proximally." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-429
is_a: ZFA:0000526 ! intermuscular bone
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000508
name: pelvic radial
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-43
is_a: ZFA:0000271 ! radial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001387 ! pelvic fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000509
name: epithalamus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-430
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000510
name: external levatores
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-432
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000511
name: extraocular musculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-433
is_a: ZFA:0000328 ! cephalic musculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000512
name: facial lobe
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-434
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000513
name: fast muscle cell somite 1
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 1" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-435
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000924 ! myotome somite 1
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000514
name: frontal bone
namespace: zebrafish_anatomy
def: "Large elongated paired dermal bones that roof the cranium and bear part of the supraorbital canal. The frontal bones cover the upper edge of the lateral ethmoid, orbitosphenoid and pterosphenoids and overlaps the parietal bone posteriorly." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-436
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001410 ! orbital region
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0000516
name: periventricular grey zone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-44
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000517
name: glossopharyngeal lobe
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-440
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000518
name: griseum centrale
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-441
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000519
name: hemal arch
namespace: zebrafish_anatomy
def: "Hemal arches extend ventrally from the centra of caudal and transitional vertebrae to enclose the caudal artery and vein. In cyprinids, the hemal arch forms directly in membrane bone." [ZFIN:curator]
synonym: "haemal arch" RELATED []
synonym: "ventral arcocentrum" RELATED []
xref: ZFIN:ZDB-ANAT-011113-442
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001361 ! basiventral
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000326 ! caudal vertebra
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000520
name: horizontal commissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-443
is_a: ZFA:0000338 ! diencephalic tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000521
name: hyoid muscle
namespace: zebrafish_anatomy
synonym: "hyoid muscles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-444
is_a: ZFA:0005145 ! muscle
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001307 ! pharyngeal musculature
relationship: part_of ZFA:0001611 ! pharyngeal arch 2
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000522
name: inferior hyohyoid
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-445
is_a: ZFA:0000521 ! hyoid muscle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000523
name: inferior reticular formation
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-446
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000542 ! medial column
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000524
name: infraorbital lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-447
is_a: ZFA:0001469 ! lateral line
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001470 ! anterior lateral line
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000525
name: intercalarium
namespace: zebrafish_anatomy
def: "Third Weberian ossicle. The intercalarium is a Y- or T-shaped modification of neural arch 2 in which an anterolateral process (the manubrium) is embedded in the interossicular ligament; other parts include the ascending and articulating processes. Bird and Mabee, 2003." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-448
is_a: ZFA:0001066 ! neural arch
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000461 ! Weberian ossicle
relationship: part_of ZFA:0001168 ! vertebra 2
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0000526
name: intermuscular bone
namespace: zebrafish_anatomy
def: "Axial bone which is a segmental ossification that forms in the myoseptum; found in teleosts fishes only." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-449
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000317 ! postcranial axial skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000527
name: pharyngobranchial bone
namespace: zebrafish_anatomy
def: "The pharyngobranchials are the dorsalmost bones of the branchial arches located immediately dorsal and medial to the epibranchials." [ZFIN:curator]
synonym: "infrapharyngobranchial" RELATED []
xref: ZFIN:ZDB-ANAT-011113-45
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000528
name: interradialis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-450
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000628 ! caudal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000529
name: kidney
namespace: zebrafish_anatomy
synonym: "mesonephros" RELATED []
xref: ZFIN:ZDB-ANAT-011113-451
is_a: ZFA:0001490 ! cavitated compound organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000163 ! renal system
relationship: part_of ZFA:0001159 ! immune system
relationship: part_of ZFA:0001438 ! coelom
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000530
name: lapillus
namespace: zebrafish_anatomy
alt_id: ZFA:0001102
synonym: "immature anterior otolith" RELATED []
synonym: "utricular otolith" RELATED []
xref: ZFIN:ZDB-ANAT-011113-452
is_a: ZFA:0001617 ! otolith
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000700 ! utricle
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000531
name: lateral column
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-453
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000421 ! reticular formation
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000532
name: lateral division
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-454
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000603 ! valvula cerebelli
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000533
name: lateral funiculus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-455
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000534
name: lateral longitudinal fasciculus
namespace: zebrafish_anatomy
alt_id: ZFA:0000198
synonym: "lateral longitundinal fasciculus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-456
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000535
name: lateral reticular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-457
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000531 ! lateral column
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000536
name: lateral zone of D
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-458
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000505 ! dorsal telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000537
name: levator operculi
namespace: zebrafish_anatomy
synonym: "levator operculae" RELATED []
xref: ZFIN:ZDB-ANAT-011113-459
is_a: ZFA:0000521 ! hyoid muscle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000538
name: rib
namespace: zebrafish_anatomy
def: "Ribs are intersegmental rod-shaped bones that form in the peritoneal membrane and attach to the vertebral parapophyses. They protect and support internal organs." [ZFIN:curator]
synonym: "dorsal rib" RELATED []
synonym: "pleural rib" RELATED []
xref: ZFIN:ZDB-ANAT-011113-46
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001582 ! non-Weberian precaudal vertebra
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000539
name: locus coeruleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-460
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000540
name: magnocellular octaval nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-461
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000401 ! octaval nerve sensory nucleus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000541
name: marginal blastomere
namespace: zebrafish_anatomy
def: "Cells (incompletely cleaved before the YSL forms), located at the surface just at the rim of the blastodisc, external to the deep blastomeres. Kimmel et al, 1995." [ZFIN:curator]
synonym: "marginal blastomeres" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-462
is_a: ZFA:0000093 ! blastomere
relationship: end ZFS:0000015 ! Blastula:Dome
relationship: start ZFS:0000005 ! Cleavage:16-cell
[Term]
id: ZFA:0000542
name: medial column
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-463
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000421 ! reticular formation
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000543
name: medial longitudinal fasciculus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-464
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000544
name: medial pterygiophores anal fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-465
is_obsolete: true
[Term]
id: ZFA:0000545
name: medulla oblongata
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-466
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000029 ! hindbrain
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000546
name: mesonephric duct
namespace: zebrafish_anatomy
def: "Duct of the adult kidney (mesonephros), present bilaterally ventral to the somites and leading to the cloacal chamber." [ZFIN:curator]
synonym: "renal duct" RELATED []
synonym: "Wolffian duct" RELATED []
xref: ZFIN:ZDB-ANAT-011113-467
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000163 ! renal system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000547
name: mouth
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-468
is_a: ZFA:0000292 ! surface structure
relationship: develops_from ZFA:0001290 ! stomodeum
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000339 ! digestive system
relationship: part_of ZFA:0001114 ! head
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000548
name: musculature system
namespace: zebrafish_anatomy
synonym: "muscle" RELATED []
synonym: "muscles" RELATED []
xref: ZFIN:ZDB-ANAT-011113-469
is_a: ZFA:0001439 ! anatomical system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000549
name: posttemporal
namespace: zebrafish_anatomy
def: "Paired fin bone that attaches the pectoral girdle to the skull via two projections contacting the epiotic and intercalar bones, and carry the main laterosensory canal." [ZFIN:curator]
synonym: "postemporal" RELATED []
xref: ZFIN:ZDB-ANAT-011113-47
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000189 ! otic region
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000550
name: naris
namespace: zebrafish_anatomy
synonym: "nares" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-470
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000047 ! peripheral olfactory organ
relationship: part_of ZFA:0001114 ! head
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000551
name: nucleus lateralis valvulae
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-471
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000552
name: nucleus ruber
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-472
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000553
name: oculomotor nucleus
namespace: zebrafish_anatomy
synonym: "motor nucleus III" RELATED []
synonym: "nIII" RELATED []
xref: ZFIN:ZDB-ANAT-011113-474
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000554
name: olfactory epithelium
namespace: zebrafish_anatomy
def: "Nasal epithelium wherein ciliated olfactory receptor neurons, supporting cells, and basal cells are located." [ZFIN:curator]
synonym: "nasal epithelium" RELATED []
synonym: "nasal sensory epithelium" RELATED []
xref: ZFIN:ZDB-ANAT-011113-475
relationship: develops_from ZFA:0001431 ! primitive olfactory epithelium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000047 ! peripheral olfactory organ
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000555
name: opercular flap
namespace: zebrafish_anatomy
synonym: "gill cover" RELATED []
synonym: "opercular apparatus" RELATED []
synonym: "operculum" RELATED []
xref: ZFIN:ZDB-ANAT-011113-476
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000556
name: optic chiasm
namespace: zebrafish_anatomy
def: "Decussation of cranial nerve II axons whereby some cross the midline and some remain ipsilateral." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-477
is_a: ZFA:0000338 ! diencephalic tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000557
name: preural 1 vertebra
namespace: zebrafish_anatomy
def: "Vertebra anterior to the urostyle; sometimes termed the 'penultimate' vertebra. Mabee and Bird, 2001." [ZFIN:curator]
synonym: "penultimate vertebra" RELATED []
synonym: "preural centrum 1" RELATED []
synonym: "pu1" RELATED []
synonym: "second last vertebra" RELATED []
xref: ZFIN:ZDB-ANAT-011113-479
is_a: ZFA:0000734 ! preural vertebra
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0000558
name: posterior macula
namespace: zebrafish_anatomy
def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator]
synonym: "pm" RELATED []
synonym: "posteromedial macula" RELATED []
synonym: "sensory patch" RELATED []
xref: ZFIN:ZDB-ANAT-011113-48
is_a: ZFA:0000386 ! macula
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000559
name: otolith organ
namespace: zebrafish_anatomy
synonym: "otolith organs" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-480
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000217 ! inner ear
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000560
name: oviduct
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-481
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000303 ! female organism
relationship: part_of ZFA:0000632 ! reproductive system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000561
name: parasphenoid
namespace: zebrafish_anatomy
def: "Long, unpaired median dermal bone that runs almost the entire length of the cranium. Contacts the prevomer anteriorly, and the prootic and basioccipital posteriorly. Anteriorly the parasphenoid is a long, thin bone that widens abruptly at the point of contact with the prootic." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-482
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000290 ! sphenoid region
relationship: part_of ZFA:0000351 ! olfactory region
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001410 ! orbital region
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000563
name: pectoral fin musculature
namespace: zebrafish_anatomy
synonym: "pectoral fin muscle" RELATED []
xref: ZFIN:ZDB-ANAT-011113-484
is_a: ZFA:0000207 ! fin musculature
relationship: develops_from ZFA:0001000 ! mesenchyme pectoral fin
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001161 ! pectoral fin
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0000564
name: pelvic abductor profundus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-485
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000258 ! pelvic fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000565
name: pelvic girdle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-486
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001387 ! pelvic fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000566
name: posterior crista
namespace: zebrafish_anatomy
alt_id: ZFA:0000478
def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator]
synonym: "caudal crista" RELATED []
synonym: "pc" RELATED []
synonym: "posterior crista ampullaris" RELATED []
synonym: "posterior cristae" RELATED PLURAL []
synonym: "sensory patch" RELATED []
synonym: "sensory patches" RELATED []
xref: ZFIN:ZDB-ANAT-011113-490
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000262 ! posterior semicircular canal
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0000567
name: premaxilla
namespace: zebrafish_anatomy
def: "The premaxilla is a bone of the upper jaw. It is an L-shaped bone first visible as a thin sliver in the anterodorsal region of the upper lip, anterior to the dorsal tip of the maxilla (5.7 mm). In the adult, the premaxilla is ligamentously attached to its counterpart at the midline and the kinethmoid posterodorsally, by the premaxillo-rostroid ligaments. Premaxillary teeth are absent in zebrafish." [ZFIN:curator]
synonym: "premaxillae" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-492
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001272 ! palatoquadrate arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000568
name: presumptive blood
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-493
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000027 ! Segmentation:20-25 somites
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000569
name: presumptive hindbrain
namespace: zebrafish_anatomy
synonym: "presumptive rhombencephalon" RELATED []
xref: ZFIN:ZDB-ANAT-011113-495
relationship: end ZFS:0000020 ! Gastrula:75%-epiboly
relationship: part_of ZFA:0000146 ! presumptive brain
relationship: part_of ZFA:0007015 ! posterior presumptive neural plate
relationship: start ZFS:0000019 ! Gastrula:Shield
[Term]
id: ZFA:0000570
name: optic primordium
namespace: zebrafish_anatomy
alt_id: ZFA:0000021
synonym: "eye field" RELATED []
xref: ZFIN:ZDB-ANAT-011113-496
relationship: end ZFS:0000023 ! Segmentation:1-4 somites
relationship: part_of ZFA:0007024 ! anterior neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000571
name: presumptive telencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-497
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0000131 ! neural keel
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000573
name: internal cellular layer
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-5
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000402 ! olfactory bulb
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000574
name: presumptive diencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-50
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0000131 ! neural keel
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000575
name: prootic
namespace: zebrafish_anatomy
def: "Paired cartilage bone that contacts the pterosphenoid anteriorly, the sphenotic and the pterotic dorsally, and the epiotic and basioccipital posteriorly. The parasphenoid covers the ventral region of each prootic, the upper edge of which contributes to the hyomandibular facet. Bear foramina that accommodate branches of the trigeminal and facial nerves." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-500
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001423 ! parachordal cartilage
relationship: develops_from ZFA:0001425 ! basal plate cartilage
relationship: develops_from ZFA:0001500 ! auditory capsule
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000189 ! otic region
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0000576
name: pterotic
namespace: zebrafish_anatomy
def: "Paired cartilage bone that contacts the autosphenotic anteriorly, the parietal dorsally, the prootic ventrally, and the epiotic and exoccipital posteriorly. The pterotic encloses the horizontal semicircular canal of the inner ear. The lower edge of the pterotic contributes to the hyomandibular facet." [ZFIN:curator]
synonym: "autopterotic" RELATED []
xref: ZFIN:ZDB-ANAT-011113-501
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001500 ! auditory capsule
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000189 ! otic region
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0000577
name: renal portal vein
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-502
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005024 ! trunk vasculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000578
name: ceratohyal bone
namespace: zebrafish_anatomy
def: "The ceratohyal begins as a ossification in the anterior portion of the ceratohyal cartilage (4.6 mm NL). The posterior end broadens and meets the epihyal in a pad of cartilage. The anterior end broadens and terminates in two heads (8.8 mm). The anterodorsal head forms a synchondrosis with the dorsal hypohyal and the anteroventral head forms a synchondrosis with the ventral hypohyal. All of the branchiostegal rays articulate with the ventral edge of the ceratohyal." [ZFIN:curator]
synonym: "anterior ceratohyal" RELATED []
synonym: "ceratohyal anterior" RELATED []
synonym: "rostral ceratohyal" RELATED []
xref: ZFIN:ZDB-ANAT-011113-505
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001400 ! ceratohyal cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001402 ! ventral hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000579
name: rostral mesencephalo-cerebellar tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-506
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000580
name: rostral preglomerular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-507
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000581
name: rostral tuberal nucleus
namespace: zebrafish_anatomy
synonym: "anterior tuberal nucleus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-508
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000707 ! ventral zone
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000582
name: saccus dorsalis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-509
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000509 ! epithalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000583
name: scapula
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-510
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001455 ! scapulocorocoid
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0000585
name: kinethmoid cartilage
namespace: zebrafish_anatomy
def: "Cranial cartilage which is a small median cartilage located between the premaxillae and anterodorsal to the ethmoid." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-115
is_a: ZFA:0001461 ! chondrocranium cartilage
relationship: end ZFS:0000040 ! Larval:Days 14-20
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000586
name: preural 2 vertebra
namespace: zebrafish_anatomy
def: "Vertebra anterior to preural centrum 1; sometimes termed the 'antepenultimate' vertebra. Mabee and Bird, 2001." [ZFIN:curator]
synonym: "antepenultimate vertebra" RELATED []
synonym: "preural centrum 2" RELATED []
synonym: "pu2" RELATED []
synonym: "third last vertebra" RELATED []
xref: ZFIN:ZDB-ANAT-011113-514
is_a: ZFA:0000734 ! preural vertebra
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0000587
name: sphenotic
namespace: zebrafish_anatomy
def: "Paired cartilage bone that contacts the pterosphenoid anteriorly, the prootic ventrally, and the pterotic posteriorly. Roofed by the frontal bone anteriorly and the parietal bone posteriorly, the sphenotic bears a large anterolateral process that borders the posterodorsal margain of the orbit. The lower edge of the sphenotic contributes to the hyomandibular facet." [ZFIN:curator]
synonym: "autosphenotic" RELATED []
xref: ZFIN:ZDB-ANAT-011113-515
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001506 ! tectum synoticum
relationship: develops_from ZFA:0001515 ! taenia marginalis posterior
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000189 ! otic region
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000588
name: statoacoustic (VIII) ganglion
namespace: zebrafish_anatomy
def: "The sensory ganglion of the ear. (See Anatomical Atlas entry for statoacoustic ganglion by T. Whitfield.)" [ZFIN:curator]
synonym: "auditory ganglion" RELATED []
synonym: "gVIII" RELATED []
synonym: "sag" RELATED []
synonym: "statoacoustic ganglia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-516
is_a: ZFA:0000013 ! cranial ganglion
relationship: develops_from ZFA:0000138 ! otic placode
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001138 ! vestibuloauditory system
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000589
name: sulcus ypsiloniformis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-518
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000505 ! dorsal telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000590
name: oral region
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-519
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000547 ! mouth
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000591
name: presumptive paraxial mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-52
relationship: end ZFS:0000021 ! Gastrula:90%-epiboly
relationship: part_of ZFA:0001377 ! presumptive mesoderm
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000592
name: superficial pelvic adductor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-520
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000258 ! pelvic fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000593
name: superior reticular formation medial column
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-521
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000542 ! medial column
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000594
name: supracleithrum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-522
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000595
name: supraoccipital
namespace: zebrafish_anatomy
def: "Large shield-shaped unpaired median cartilage bone that contact the parietal anteriorly, and the exocciptial and epiotic laterally. Forms the posterodorsal most point of the cranium. The supraoccipital usually bears a crest that extends posterodorsally." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-523
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001506 ! tectum synoticum
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001414 ! occipital region
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000596
name: supraorbital series
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-524
is_obsolete: true
[Term]
id: ZFA:0000597
name: telencephalic tracts
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-525
is_a: ZFA:0000145 ! CNS tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000079 ! telencephalon
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000598
name: testis
namespace: zebrafish_anatomy
def: "Male reproductive organ." [ZFIN:curator]
synonym: "testes" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-526
is_a: ZFA:0000413 ! gonad
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000242 ! male organism
relationship: part_of ZFA:0001158 ! endocrine system
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0000599
name: torus semicircularis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-527
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001353 ! mesencephalic tectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000600
name: cranial nerve IV
namespace: zebrafish_anatomy
synonym: "CN-IV" RELATED []
synonym: "trochlear" RELATED []
synonym: "trochlear nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-528
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000601
name: pretectal periventricular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-53
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000293 ! synencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000602
name: uroneural
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-530
is_a: ZFA:0001066 ! neural arch
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000862 ! caudal fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000603
name: valvula cerebelli
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-531
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000100 ! cerebellum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000604
name: ventral aorta
namespace: zebrafish_anatomy
def: "Outflow artery from the heart to the aortic arches. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-532
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000605
name: ventral funiculus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-533
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000606
name: ventral oblique branchial muscle
namespace: zebrafish_anatomy
synonym: "ventral oblique branchial muscles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-534
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000607
name: ventral rhombencephalic commissure brain stem
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-535
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000608
name: ventral transverse
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-536
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000609
name: ventrolateral nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-537
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000599 ! torus semicircularis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000610
name: vertical myoseptum
namespace: zebrafish_anatomy
def: "Connective tissue partitions developing between the myotomes . Kimmel et al, 1995." [ZFIN:curator]
synonym: "transverse myoseptum" RELATED []
xref: ZFIN:ZDB-ANAT-011113-538
is_a: ZFA:0001089 ! myoseptum
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000611
name: visceromotor column
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-539
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000612
name: protractor hyoidei
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-54
is_a: ZFA:0000521 ! hyoid muscle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000614
name: abductor profundus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-542
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000563 ! pectoral fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000615
name: adductor arcus palatini
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-543
is_a: ZFA:0000521 ! hyoid muscle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000616
name: adductor profundus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-544
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000563 ! pectoral fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000617
name: anal erector
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-545
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001154 ! anal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000618
name: ansulate commissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-546
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000619
name: anterior crista
namespace: zebrafish_anatomy
alt_id: ZFA:0000273
def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator]
synonym: "ac" RELATED []
synonym: "anterior crista ampullaris" RELATED []
synonym: "anterior cristae" RELATED PLURAL []
synonym: "rostral crista" RELATED []
synonym: "sensory patch" RELATED []
synonym: "sensory patches" RELATED []
xref: ZFIN:ZDB-ANAT-011113-547
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000314 ! anterior semicircular canal
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0000620
name: autopalatine
namespace: zebrafish_anatomy
def: "The cartilaginous autopalatine forms from the anterior palatoquadrate arch. The first sign of ossification is visible at the anterior tip where it articulates with the maxilla (7.6 mm). In adults there are three processes at the anterior portion of the palatine: a ventromedial process, which forms the socket of the small ball- and- socket joint with the preethmoid; a dorsomedial process, which is connected by a short ligament to the ethmoid; and a lateral process, which extends toward the first infraorbital. Possession of a dorsomedial process, which abuts the ethmoid, is a unique feature shared by Cypriniformes (Fink and Fink, 1981). The palatine has two components, the autopalatine (derived from pars autopalatine) and the dermal component having teeth, the dermopalatine Arratia & Schultze 1990. The element in cypriniforms is only the cartilage part, so that it is more correct to name it autopalatine and not as palatine in general that it implies a fusion of elements (as in perciforms)." [ZFIN:curator]
synonym: "palatine" RELATED []
xref: ZFIN:ZDB-ANAT-011113-549
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001272 ! palatoquadrate arch
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0000621
name: quadrate
namespace: zebrafish_anatomy
def: "The quadrate is the dorsal bone in the jaw joint with the anguloarticular of the lower jaw. Ossification of the quadrate, a cartilage bone, begins as a posteriorly projecting membranous spine between the symplectic cartilage and the preopercle (5.1 mm NL). The body of the quadrate ossifies first at the ball-and-socket articulation with the anguloarticular (6.5 mm). The adult quadrate is shaped roughly like an inverted triangle with a long, posteriorly projecting spine off its posteroventral edge. The presence of a posteroventral or posterior process of the quadrate is a synapomorphy of Teleostei." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-55
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001272 ! palatoquadrate arch
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0000622
name: barbel
namespace: zebrafish_anatomy
def: "Surface structure which is a tactile structure found in the branchial region. Barbels are covered with epidermis rich in taste buds, and are innervated by branches of the cranial nerves." [ZFIN:curator]
synonym: "barble" RELATED []
xref: ZFIN:ZDB-ANAT-011113-550
is_a: ZFA:0000292 ! surface structure
relationship: develops_from ZFA:0005119 ! barbel primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000368 ! integument
relationship: part_of ZFA:0001114 ! head
relationship: start ZFS:0000043 ! Juvenile:Days 45-89
[Term]
id: ZFA:0000623
name: basipterygium
namespace: zebrafish_anatomy
synonym: "pelvic bone" RELATED []
xref: ZFIN:ZDB-ANAT-011113-551
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001539 ! basipterygium cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000565 ! pelvic girdle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000624
name: brachium conjunctivium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-552
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000625
name: branchial bar
namespace: zebrafish_anatomy
synonym: "branchial bars" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-553
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000056 ! pharynx
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000626
name: bulbo-spinal tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-554
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000627
name: epihyal
namespace: zebrafish_anatomy
def: "The cartilaginous epihyal begins ossifying on the anterior surface of the posterior end of the ceratohyal cartilage near the site of articulation with the interhyal (5.8 mm). It joins the ceratohyal in a pad of persisting cartilage." [ZFIN:curator]
synonym: "caudal ceratohyal" RELATED []
synonym: "posterior ceratohyal" RELATED []
xref: ZFIN:ZDB-ANAT-011113-555
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001400 ! ceratohyal cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001402 ! ventral hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000628
name: caudal fin musculature
namespace: zebrafish_anatomy
def: "The caudal fin is the most posterior median fin. It is composed of a complex of three modified centra and modified neural and hemal arches and spines. Mabee and Bird, 2001." [ZFIN:curator]
synonym: "tail fin" RELATED []
xref: ZFIN:ZDB-ANAT-011113-556
is_a: ZFA:0000207 ! fin musculature
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001058 ! caudal fin
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0000629
name: caudal motor nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-557
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000713 ! abducens motor nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000630
name: caudal parvocellular preoptic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-558
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000470 ! preoptic area
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000631
name: caudal pretectal nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-559
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000687 ! superficial pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000632
name: reproductive system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-56
is_a: ZFA:0001439 ! anatomical system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000633
name: caudal tuberculum
namespace: zebrafish_anatomy
synonym: "posterior tubercle" RELATED []
synonym: "posterior tuberculum" RELATED []
xref: ZFIN:ZDB-ANAT-011113-560
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000634
name: caudal zone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-561
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000392 ! median tuberal portion
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000635
name: central pretectal nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-562
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000183 ! central pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000636
name: cerebellar crest
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-563
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000291 ! medial octavolateralis nucleus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000637
name: claustrum cartilage
namespace: zebrafish_anatomy
def: "The claustrum is a bilaterally paired cartilage or cartilage replacement bone with extensions of membrane bone forming part of a dorsolateral protective wall around the neural canal between the back of the skull and the beginning of the neural arch series. The first Weberian ossicle. Most recently, de Pinna and Grande (2003) have proposed the claustrum is homologous to the accessory neural arch of lower teleosts." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-564
is_a: ZFA:0001457 ! postcranial axial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000461 ! Weberian ossicle
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0000638
name: commissura rostral, pars dorsalis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-565
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001108 ! anterior commissure
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000639
name: commissure of the secondary gustatory nuclei
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-566
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000640
name: cornea
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-567
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000107 ! eye
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0000641
name: cranial nerve
namespace: zebrafish_anatomy
def: "Twelve pairs of cranial nerves exit/enter the cranium through openings in the skull. The nerves contain efferent axons with motor and glandular functions, as well as afferent axons from cranial ganglia with sensory functions. The nerves are numbered in a rostral to caudal sequence, with the exception of the lateral line nerves." [ZFIN:curator]
synonym: "cranial nerves" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-568
is_a: ZFA:0007009 ! nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000396 ! nervous system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000642
name: decussation of the medial octavolateralis nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-569
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000381 ! lateral line sensory nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000643
name: rostral cerebellar tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-57
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000644
name: dental plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-570
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000547 ! mouth
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000645
name: descending octaval nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-571
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000401 ! octaval nerve sensory nucleus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000646
name: anal fin distal radial
namespace: zebrafish_anatomy
def: "Rod-like internal median skeletal support bones of the anal fin, which articulate with the lepidotrichia distally." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-572
is_a: ZFA:0001646 ! anal fin radial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001420 ! anal fin pterygiophore
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000647
name: dorsal caudal thalamic nucleus
namespace: zebrafish_anatomy
synonym: "dorsal posterior thalamic nucleus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-573
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000653 ! dorsal thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000648
name: dorsal fin musculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-574
is_a: ZFA:0000207 ! fin musculature
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001173 ! dorsal fin
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000649
name: dorsal horn spinal cord
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-575
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000650
name: dorsal motor root of V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-576
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000651
name: dorsal pelvic arrector
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-577
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000258 ! pelvic fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000652
name: dorsal root
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-578
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000653
name: dorsal thalamus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-579
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001215 ! thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000654
name: rostral motor nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-58
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000713 ! abducens motor nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000655
name: dorsomedial optic tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-580
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000252 ! optic tract
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000656
name: ectopterygoid
namespace: zebrafish_anatomy
def: "The ectopterygoid is dermal bone located at the anterior part of the palatoquadrate. It is first visible as a very thin ossification along the anteroventral border of the palatoquadrate cartilage (6.4 mm). In adults it is a long sliver of bone that is narrow anteriorly where it meets the entopterygoid in a synostosis. It is slightly wider at its posterior synostosis with the quadrate." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-581
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001272 ! palatoquadrate arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000657
name: entopterygoid
namespace: zebrafish_anatomy
def: "The entopterygoid is a dermal bone that forms the anteroventral and ventral surface of the orbit. It develops as a long sliver of bone developing in the membrane dorsomedial to the palatoquadrate cartilage (3.8 mm NL)." [ZFIN:curator]
synonym: "endopterygoid" RELATED []
synonym: "mesopterygoid" RELATED []
xref: ZFIN:ZDB-ANAT-011113-582
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001272 ! palatoquadrate arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000658
name: epibranchial bone
namespace: zebrafish_anatomy
def: "Epibranchials are dorsal parts of the gill arches. Epibranchials 1-4 ossify in the epibranchial cartilages in a posterior to anterior progression. The cartilaginous tips of the epibranchials articulate laterally with the cartilaginous tips of the ceratobranchials. Gill rakers are present on the anterior and posterior edges of epibranchials 2 4 and the posterior edge of epibranchial 1. A reduced gill raker is present on the anterior margin of epibranchial 1 in some specimens." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-583
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001527 ! epibranchial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000660
name: epural
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-585
is_a: ZFA:0001336 ! neural spine
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000862 ! caudal fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000661
name: exoccipital
namespace: zebrafish_anatomy
def: "Paired cartilage bone that bears a large foramen (lateral occipital foramen). Contacts the supraoccipital dorsally, the epiotic laterally and the basioccipital ventrally. Forms the posterior hind margin of the cranium and borders the lateral and posterior margins of the forum (foramen) magnum." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-586
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001423 ! parachordal cartilage
relationship: develops_from ZFA:0001504 ! occipital arch cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001414 ! occipital region
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0000662
name: external pharyngoclavicularis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-587
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000663
name: extrascapular
namespace: zebrafish_anatomy
alt_id: ZFA:0001413
synonym: "supratemporal" RELATED []
xref: ZFIN:ZDB-ANAT-011113-588
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000664
name: cranial nerve VII
namespace: zebrafish_anatomy
synonym: "CN-VII" RELATED []
synonym: "facial nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-589
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001101 ! gustatory system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000665
name: rostral root of abducens nerve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-59
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000666
name: filamental artery
namespace: zebrafish_anatomy
synonym: "filamental arteries" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-590
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000667 ! gill filament
relationship: part_of ZFA:0005003 ! pharyngeal vasculature
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0000667
name: gill filament
namespace: zebrafish_anatomy
def: "Branched region of the gill where respiratory exchange takes place. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-592
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000668
name: cranial nerve IX
namespace: zebrafish_anatomy
synonym: "CN-IX" RELATED []
synonym: "glossopharyngeal nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-594
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001101 ! gustatory system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000669
name: head kidney
namespace: zebrafish_anatomy
def: "The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis. Davidson and Zon 2004." [ZFIN:curator]
synonym: "anterior kidney" RELATED []
synonym: "kidney marrow" RELATED []
xref: ZFIN:ZDB-ANAT-011113-595
is_a: ZFA:0000496 ! compound organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000529 ! kidney
relationship: part_of ZFA:0001158 ! endocrine system
relationship: part_of ZFA:0005023 ! hematopoietic system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000670
name: hepatic vein
namespace: zebrafish_anatomy
synonym: "hepatic veins" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-596
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000671
name: horizontal myoseptum
namespace: zebrafish_anatomy
def: "A connective tissue partition developing at the apex of the chevron-shaped myotome and separating dorsal (epaxial) and ventral (hypaxial) body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-597
is_a: ZFA:0001089 ! myoseptum
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000672
name: hyomandibula
namespace: zebrafish_anatomy
def: "The hyomandibula is the large, dorsal-most member of the hyoid arch. It begins ossifying in the dorsal edge of the hyosymplectic cartilage near the hyomandibular foramen (4.6 mm NL). Ossification spreads through the cartilage, and sheets of membrane bone form off the cartilage model anteriorly and posteriorly (6.6 mm). In the adult, the hyomandibula has cartilage-capped anterior and posterior articulating heads that meet the sphenotic-prootic fossa and the pterotic fossa, respectively, in synovial joints. A posterior knob of bone develops, also capped in cartilage, and it forms a synovial joint with the opercle." [ZFIN:curator]
synonym: "hyomandibular" RELATED []
xref: ZFIN:ZDB-ANAT-011113-598
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001422 ! hyosymplectic cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001401 ! dorsal hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000673
name: hypobranchial artery
namespace: zebrafish_anatomy
def: "A pair of HA are connect one to each AA1. They run rostromedially until at the extreme rostro-ventral midline the two vessels merge and then run straight caudally along the ventral midline until they reach the cranial end of the ventral aorta (VA). There, the single HA passes just dorsal to the rostral end of the VA and then immediately splits again into a pair of HA. The paired HA continue caudally just to either side of the ventral midline. The HA provide blood supply to the ventral branchial region and the heart.Isogai et al. 2001." [ZFIN:curator]
synonym: "HA" RELATED []
xref: ZFIN:ZDB-ANAT-011113-599
is_a: ZFA:0000005 ! artery
relationship: develops_from ZFA:0005005 ! aortic arch 1
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0000674
name: interopercle
namespace: zebrafish_anatomy
synonym: "interopercles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-6
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000555 ! opercular flap
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001401 ! dorsal hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000676
name: sagitta
namespace: zebrafish_anatomy
alt_id: ZFA:0001103
synonym: "immature posterior otolith" RELATED []
synonym: "saccular otolith" RELATED []
xref: ZFIN:ZDB-ANAT-011113-61
is_a: ZFA:0001617 ! otolith
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000428 ! saccule
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000677
name: segmental intercostal artery
namespace: zebrafish_anatomy
synonym: "segmental intercostal arteries" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-62
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000678
name: hair cell anterior macula
namespace: zebrafish_anatomy
def: "Specialized neuronal receptor cells of the lateral line and acoustico-vestibular systems. Kimmel et al, 1995. (Also see Anatomical Atlas entry for hair cells by T. Whitfield.)" [ZFIN:curator]
synonym: "sensory hair cells anterior macula" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-63
is_a: ZFA:0009366 ! hair cell
relationship: develops_from ZFA:0001098 ! immature hair cell anterior macula
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000168 ! anterior macula
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000679
name: sensory root of facial nerve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-64
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000680
name: sinoatrial valve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-65
is_a: ZFA:0005065 ! heart valve
relationship: develops_from ZFA:0001317 ! endocardial cushion
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000154 ! sinus venosus
relationship: part_of ZFA:0000471 ! atrium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000681
name: neural postzygapophysis
namespace: zebrafish_anatomy
def: "Paired, dorsomedially directed processes on the posterior ends of the centra, ligamentously joined to the neural prezygapophyses of the immediately posterior vertebra." [ZFIN:curator]
synonym: "neural postzygapophyses" RELATED PLURAL []
synonym: "neural postzygopophyses" RELATED []
xref: ZFIN:ZDB-ANAT-060331-3
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001066 ! neural arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000682
name: spinal artery
namespace: zebrafish_anatomy
synonym: "spinal arteries" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-67
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000683
name: subcommissural organ
namespace: zebrafish_anatomy
synonym: "SCO" RELATED []
xref: ZFIN:ZDB-ANAT-011113-69
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000293 ! synencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000684
name: intertectal commissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-7
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000685
name: superficial abductor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-70
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000563 ! pectoral fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000686
name: superficial grey and white zone
namespace: zebrafish_anatomy
synonym: "superficial grey and white zones" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-71
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000687
name: superficial pretectum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-72
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000418 ! pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000688
name: olfactory support cell
namespace: zebrafish_anatomy
synonym: "support cells" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-73
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000047 ! peripheral olfactory organ
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0000689
name: supracommissural nucleus of V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-74
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000304 ! ventral telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000690
name: supraoptic commissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-75
is_a: ZFA:0000338 ! diencephalic tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000691
name: supraorbital bone
namespace: zebrafish_anatomy
def: "Paired dermal bones that form the anterodorsal margin of the orbit." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-76
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001410 ! orbital region
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000692
name: symplectic
namespace: zebrafish_anatomy
def: "The symplectic is an irregularly rod-shaped cartilage replacement bone articulating with the hyomandibular and quadrate." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-77
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001422 ! hyosymplectic cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001401 ! dorsal hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000693
name: tangential nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-78
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000401 ! octaval nerve sensory nucleus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000694
name: ceratobranchial 5 tooth
namespace: zebrafish_anatomy
def: "The tips of the ceratobranchial5 teeth form before the ceratobranchial itself (3.0 mm NL). As they grow ventrally, they meet the perichondrally ossified surface of ceratobranchial5 and become firmly ankylosed to the bone. Ceratobranchial teeth are the only teeth present in zebrafish and other cypriniforms." [ZFIN:curator]
synonym: "pharyngeal teeth" RELATED []
synonym: "teeth" RELATED []
synonym: "tooth" RELATED []
xref: ZFIN:ZDB-ANAT-011113-79
is_a: ZFA:0001488 ! multi-tissue structure
relationship: develops_from ZFA:0005138 ! dental organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000056 ! pharynx
relationship: part_of ZFA:0001239 ! ceratobranchial 5 bone
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000695
name: labial cavities
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-8
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000339 ! digestive system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000696
name: telencephalic ventricle
namespace: zebrafish_anatomy
synonym: "lateral ventricle" RELATED []
synonym: "telencephalic vesicle" RELATED []
xref: ZFIN:ZDB-ANAT-011113-80
relationship: develops_from ZFA:0001259 ! forebrain ventricle
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000079 ! telencephalon
relationship: part_of ZFA:0001261 ! ventricular system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000697
name: cranial nerve V
namespace: zebrafish_anatomy
synonym: "CN-V" RELATED []
synonym: "trigeminal nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-81
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000698
name: tripus
namespace: zebrafish_anatomy
def: "The fourth Weberian ossicle. The tripus is a complex modification of the parapophysis and rib of the third vertebra. Anteriorly it attaches to the interosseus ligament and posteriorly it extends as a transformator process embedded in the tunica externa of the swimbladder. Bird and Mabee, 2003." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-82
is_a: ZFA:0001591 ! endochondral bone
is_a: ZFA:0001636 ! membrane bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000461 ! Weberian ossicle
relationship: part_of ZFA:0001169 ! vertebra 3
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0000699
name: ural ossification
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-83
is_obsolete: true
[Term]
id: ZFA:0000700
name: utricle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-84
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000559 ! otolith organ
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000701
name: ventral arrector
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-85
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000563 ! pectoral fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000702
name: ventral horn spinal cord
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-86
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000703
name: ventral motor nucleus trigeminal nerve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-87
is_a: ZFA:0001365 ! trigeminal motor nuclei
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000704
name: ventral pelvic arrector
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-88
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000258 ! pelvic fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000705
name: ventral root
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-89
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000706
name: posterior intestine
namespace: zebrafish_anatomy
def: "The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates. Wallace et al, 2005." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-9
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001338 ! intestine
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000707
name: ventral zone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-90
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000392 ! median tuberal portion
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000708
name: ventrolateral optic tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-91
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000252 ! optic tract
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000709
name: vestibulo-spinal tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-92
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000710
name: viscerosensory commissural nucleus of Cajal
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-93
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000711
name: DEL
namespace: zebrafish_anatomy
def: "A multilayer of deep cells of fairly uniform thickness that forms during early epiboly (at dome stage; upon conversion of the blastodisc to the blastoderm); during gastrulation the DEL (deep cell layer) gives rise to the epiblast and hypoblast. Kimmel et al, 1995." [ZFIN:curator]
synonym: "deep cell layer" RELATED [ZFIN:ZDB-PUB-961014-576]
synonym: "DEL cells" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-94
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0001473 ! deep blastomere
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0001176 ! blastoderm
relationship: start ZFS:0000016 ! Blastula:30%-epiboly
[Term]
id: ZFA:0000712
name: I-YSL
namespace: zebrafish_anatomy
def: "The portion of the YSL that lies deep to the blastoderm during epiboly. Kimmel et al, 1995." [ZFIN:curator]
synonym: "internal yolk syncytial layer" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-011113-95
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: part_of ZFA:0000088 ! YSL
relationship: start ZFS:0000013 ! Blastula:Oblong
[Term]
id: ZFA:0000713
name: abducens motor nuclei
namespace: zebrafish_anatomy
synonym: "motor nucleus VI" RELATED []
synonym: "nVI" RELATED []
xref: ZFIN:ZDB-ANAT-011113-96
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000714
name: accessory pretectal nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-97
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000183 ! central pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000715
name: adductor hyohyoid
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-98
is_a: ZFA:0000521 ! hyoid muscle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000716
name: afferent branchial artery
namespace: zebrafish_anatomy
synonym: "ABA" RELATED []
xref: ZFIN:ZDB-ANAT-011113-99
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: part_of ZFA:0005003 ! pharyngeal vasculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000717
name: apical ectodermal ridge median fin fold
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-1
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000040 ! median fin fold
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000718
name: epaxial region somite 27
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-10
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000931 ! myotome somite 27
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000719
name: slow muscle cell somite 21
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 21" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-100
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000929 ! myotome somite 21
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000720
name: slow muscle cell somite 24
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 24" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-101
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000930 ! myotome somite 24
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000721
name: slow muscle cell somite 27
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 27" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-102
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000931 ! myotome somite 27
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000722
name: slow muscle cell somite 3
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 3" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-103
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000932 ! myotome somite 3
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000723
name: slow muscle cell somite 5
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 5" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-104
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000933 ! myotome somite 5
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000724
name: slow muscle cell somite 8
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 8" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-105
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000934 ! myotome somite 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000725
name: somite 11
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-106
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000726
name: somite 14
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-107
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000727
name: somite 17
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-108
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000728
name: somite 2
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-109
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000729
name: epaxial region somite 3
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-11
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000932 ! myotome somite 3
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000730
name: somite 23
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-110
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000731
name: somite 27
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-111
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000732
name: somite 3
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-112
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000733
name: somite 7
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-113
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000734
name: preural vertebra
namespace: zebrafish_anatomy
def: "Vertebra which are the three most posterior vertebra supporting the caudal fin." [ZFIN:curator]
synonym: "caudal fin vertebra" RELATED []
synonym: "specialized centra/vertebrae" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-114
is_a: ZFA:0000326 ! caudal vertebra
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000862 ! caudal fin skeleton
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0000735
name: hemal postzygapophysis
namespace: zebrafish_anatomy
def: "Paired, ventromedially directed processes on the posterior ends of the centra, ligamentously joined to the hemal postzygapophyses of the immediately posterior vertebra. The most posterior caudal vertebrae lack hemal postzygapophyses." [ZFIN:curator]
synonym: "haemal postzygapophysis" RELATED []
synonym: "hemal postygopophysis" RELATED []
synonym: "hemal postzygapophyses" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060331-4
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000519 ! hemal arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000736
name: apical ectodermal ridge pectoral fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-116
relationship: develops_from ZFA:0000085 ! apical ectodermal ridge pectoral fin bud
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0001161 ! pectoral fin
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0000737
name: cranium
namespace: zebrafish_anatomy
def: "Skeletal system which is part of the skull, including the splanchnocranium, chondrocranium, and dermatocranium." [ZFIN:curator]
synonym: "cranial skeleton" RELATED []
xref: ZFIN:ZDB-ANAT-020309-117
is_a: ZFA:0000434 ! skeletal system
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001114 ! head
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000738
name: dorsal oblique extraocular muscle
namespace: zebrafish_anatomy
synonym: "dorsal oblique extraocular muscles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-118
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000511 ! extraocular musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000739
name: epaxial region somite 11
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-119
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000801 ! myotome somite 11
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000740
name: epaxial region somite 5
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-12
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000933 ! myotome somite 5
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000741
name: epaxial region somite 14
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-120
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000044 ! myotome somite 14
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000742
name: epaxial region somite 17
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-121
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001015 ! myotome somite 17
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000743
name: epaxial region somite 2
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-122
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001016 ! myotome somite 2
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000744
name: epaxial region somite 22
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-123
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001017 ! myotome somite 22
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000745
name: epaxial region somite 25
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-124
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001018 ! myotome somite 25
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000746
name: epaxial region somite 28
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-125
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001019 ! myotome somite 28
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000747
name: epaxial region somite 30
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-126
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001020 ! myotome somite 30
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000748
name: epaxial region somite 6
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-127
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001021 ! myotome somite 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000749
name: epaxial region somite 9
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-128
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001022 ! myotome somite 9
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000750
name: fast muscle cell somite 10
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 10" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-129
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001013 ! myotome somite 10
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000751
name: epaxial region somite 8
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-13
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000934 ! myotome somite 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000752
name: fast muscle cell somite 13
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 13" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-130
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001014 ! myotome somite 13
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000753
name: fast muscle cell somite 16
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 16" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-131
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000927 ! myotome somite 16
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000754
name: fast muscle cell somite 19
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 19" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-132
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000928 ! myotome somite 19
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000755
name: fast muscle cell somite 21
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 21" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-133
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000929 ! myotome somite 21
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000756
name: fast muscle cell somite 24
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 24" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-134
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000930 ! myotome somite 24
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000757
name: fast muscle cell somite 27
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 27" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-135
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000931 ! myotome somite 27
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000758
name: fast muscle cell somite 3
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 3" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-136
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000932 ! myotome somite 3
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000759
name: fast muscle cell somite 5
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 5" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-137
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000933 ! myotome somite 5
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000760
name: fast muscle cell somite 8
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 8" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-138
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000934 ! myotome somite 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000761
name: basal plate midbrain
namespace: zebrafish_anatomy
synonym: "floor plate midbrain" RELATED []
synonym: "floorplate midbrain" RELATED []
xref: ZFIN:ZDB-ANAT-020309-139
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000128 ! midbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000762
name: facio-acoustic neural crest
namespace: zebrafish_anatomy
def: "Cranial neural crest that gives rise to the facio-acoustic ganglion." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-14
is_a: ZFA:0001194 ! cranial neural crest
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000763
name: floor plate rhombomere 2
namespace: zebrafish_anatomy
synonym: "floor plate r2" RELATED []
synonym: "floorplate r2" RELATED []
xref: ZFIN:ZDB-ANAT-020309-140
is_a: ZFA:0001258 ! floor plate hindbrain
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000822 ! rhombomere 2
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000764
name: floor plate rhombomere 5
namespace: zebrafish_anatomy
synonym: "floor plate r5" RELATED []
synonym: "floorplate r5" RELATED []
xref: ZFIN:ZDB-ANAT-020309-141
is_a: ZFA:0001258 ! floor plate hindbrain
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000823 ! rhombomere 5
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000765
name: floor plate rhombomere 8
namespace: zebrafish_anatomy
synonym: "floor plate r8" RELATED []
synonym: "floorplate r8" RELATED []
xref: ZFIN:ZDB-ANAT-020309-142
is_a: ZFA:0001258 ! floor plate hindbrain
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000153 ! rhombomere 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000766
name: granular layer valvula cerebelli
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-143
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000603 ! valvula cerebelli
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000767
name: hypaxial region somite 11
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-144
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000801 ! myotome somite 11
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000768
name: hypaxial region somite 14
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-145
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000044 ! myotome somite 14
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000769
name: hypaxial region somite 17
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-146
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001015 ! myotome somite 17
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000770
name: hypaxial region somite 2
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-147
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001016 ! myotome somite 2
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000771
name: hypaxial region somite 22
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-148
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001017 ! myotome somite 22
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000772
name: hypaxial region somite 25
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-149
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001018 ! myotome somite 25
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000773
name: fast muscle cell somite 12
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 12" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-15
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000926 ! myotome somite 12
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000774
name: hypaxial region somite 28
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-150
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001019 ! myotome somite 28
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000775
name: hypaxial region somite 30
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-151
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001020 ! myotome somite 30
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000776
name: hypaxial region somite 6
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-152
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001021 ! myotome somite 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000777
name: hypaxial region somite 9
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-153
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001022 ! myotome somite 9
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000778
name: interneuron spinal cord
namespace: zebrafish_anatomy
synonym: "interneurons spinal cord" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-154
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000779
name: lateral forebrain bundle telencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-155
is_a: ZFA:0000597 ! telencephalic tracts
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0007012 ! lateral forebrain bundle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000780
name: lateral wall diencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-156
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000781
name: lateral wall rhombomere 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-157
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0001031 ! rhombomere 1
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000782
name: lateral wall rhombomere 4
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-158
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0001032 ! rhombomere 4
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000783
name: lateral wall rhombomere 7
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-159
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000949 ! rhombomere 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000784
name: fast muscle cell somite 15
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 15" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-16
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000802 ! myotome somite 15
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000785
name: lateral wall telencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-160
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000079 ! telencephalon
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000786
name: medial migration pathway mesenchyme
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-161
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000787
name: mesenchyme derived from head neural crest
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-162
is_a: ZFA:0000113 ! head mesenchyme
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000788
name: mesenchyme dorsal fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-163
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0001173 ! dorsal fin
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000789
name: mesoderm pectoral fin bud
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-164
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: part_of ZFA:0000141 ! pectoral fin bud
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000790
name: muscle pioneer somite 10
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 10" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-165
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001047 ! slow muscle cell somite 10
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000791
name: muscle pioneer somite 13
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 13" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-166
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001048 ! slow muscle cell somite 13
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000792
name: muscle pioneer somite 16
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 16" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-167
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001049 ! slow muscle cell somite 16
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000793
name: muscle pioneer somite 19
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 19" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-168
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001050 ! slow muscle cell somite 19
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000794
name: muscle pioneer somite 22
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 22" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-169
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000844 ! slow muscle cell somite 22
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000795
name: fast muscle cell somite 18
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 18" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-17
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000803 ! myotome somite 18
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000796
name: muscle pioneer somite 25
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 25" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-170
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000845 ! slow muscle cell somite 25
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000797
name: muscle pioneer somite 28
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 28" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-171
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000846 ! slow muscle cell somite 28
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000798
name: muscle pioneer somite 30
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 30" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-172
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000847 ! slow muscle cell somite 30
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000799
name: muscle pioneer somite 6
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 6" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-173
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000848 ! slow muscle cell somite 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000800
name: muscle pioneer somite 9
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 9" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-174
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000850 ! slow muscle cell somite 9
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000801
name: myotome somite 11
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-175
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000725 ! somite 11
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000802
name: myotome somite 15
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-176
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000852 ! somite 15
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000803
name: myotome somite 18
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-177
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000853 ! somite 18
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000804
name: myotome somite 20
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-178
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000156 ! somite 20
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000805
name: myotome somite 23
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-179
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000730 ! somite 23
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000806
name: fast muscle cell somite 20
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 20" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-18
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000804 ! myotome somite 20
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000807
name: myotome somite 26
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-180
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000074 ! somite 26
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000808
name: myotome somite 29
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-181
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000981 ! somite 29
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000809
name: myotome somite 4
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-182
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000857 ! somite 4
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000810
name: myotome somite 7
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-183
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000733 ! somite 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000811
name: neural crest diencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-184
is_a: ZFA:0001194 ! cranial neural crest
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000812
name: neural crest telencephalon
namespace: zebrafish_anatomy
def: "Cranial neural crest that is part of the telencephalon." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-185
is_a: ZFA:0001194 ! cranial neural crest
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000813
name: infraorbital lateral line neuromast
namespace: zebrafish_anatomy
def: "Neuromast that is part of the infraorbital lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromast infraorbital" RELATED []
synonym: "neuromasts infraorbital" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-186
is_a: ZFA:0000243 ! neuromast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000524 ! infraorbital lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000814
name: opercular lateral line neuromast
namespace: zebrafish_anatomy
def: "Neuromast that is part of the opercular lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromast opercular" RELATED []
synonym: "neuromasts opercular" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-187
is_a: ZFA:0000243 ! neuromast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000424 ! opercular lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000815
name: nucleus of the medial longitudinal fasciculus medulla oblongata
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-188
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000816
name: oral epithelium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-189
is_a: ZFA:0001486 ! epithelium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000590 ! oral region
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0000817
name: fast muscle cell somite 23
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 23" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-19
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000805 ! myotome somite 23
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000818
name: vagal neural crest
namespace: zebrafish_anatomy
def: "Vagal neural crest is adjacent to the first seven somites gives rise to both ganglionic and ectomesenchymal derivatives." [ZFIN:curator]
synonym: "post-otic neural crest" RELATED []
xref: ZFIN:ZDB-ANAT-060816-2
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001024 ! trunk neural crest
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000819
name: postcommissural nucleus of V central entopeduncular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-191
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000304 ! ventral telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000820
name: presumptive neuron neural tube
namespace: zebrafish_anatomy
synonym: "presumptive neurons neural tube" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-192
relationship: end ZFS:0000027 ! Segmentation:20-25 somites
relationship: part_of ZFA:0001135 ! neural tube
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000821
name: primary neuron hindbrain
namespace: zebrafish_anatomy
synonym: "primary neurons hindbrain" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-195
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0007029 ! hindbrain neural keel
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000822
name: rhombomere 2
namespace: zebrafish_anatomy
def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator]
synonym: "r2" RELATED []
xref: ZFIN:ZDB-ANAT-020309-196
is_a: ZFA:0001064 ! rhombomere
relationship: develops_from ZFA:0001208 ! presumptive rhombomere 2
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000823
name: rhombomere 5
namespace: zebrafish_anatomy
def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator]
synonym: "r5" RELATED []
xref: ZFIN:ZDB-ANAT-020309-197
is_a: ZFA:0001064 ! rhombomere
relationship: develops_from ZFA:0001211 ! presumptive rhombomere 5
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000824
name: roof plate rhombomere 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-198
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000822 ! rhombomere 2
relationship: part_of ZFA:0001311 ! roof plate rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000825
name: roof plate rhombomere 6
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-199
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000069 ! rhombomere 6
relationship: part_of ZFA:0001311 ! roof plate rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000826
name: central nucleus torus semicircularis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-2
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000599 ! torus semicircularis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000827
name: fast muscle cell somite 26
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 26" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-20
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000807 ! myotome somite 26
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000828
name: roof plate rhombomere 5
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-200
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000823 ! rhombomere 5
relationship: part_of ZFA:0001311 ! roof plate rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000829
name: sclerotome somite 11
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-201
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000725 ! somite 11
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000830
name: sclerotome somite 14
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-202
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000726 ! somite 14
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000831
name: sclerotome somite 17
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-203
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000727 ! somite 17
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000832
name: sclerotome somite 2
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-204
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000728 ! somite 2
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000833
name: sclerotome somite 22
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-205
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000978 ! somite 22
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000834
name: sclerotome somite 25
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-206
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000980 ! somite 25
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000835
name: sclerotome somite 28
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-207
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000856 ! somite 28
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000836
name: sclerotome somite 30
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-208
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000157 ! somite 30
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000837
name: sclerotome somite 6
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-209
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000982 ! somite 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000838
name: fast muscle cell somite 29
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 29" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-21
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000808 ! myotome somite 29
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000839
name: sclerotome somite 9
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-210
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000983 ! somite 9
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000840
name: slow muscle cell somite 11
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 11" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-211
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000801 ! myotome somite 11
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000841
name: slow muscle cell somite 14
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 14" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-212
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000044 ! myotome somite 14
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000842
name: slow muscle cell somite 17
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 17" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-213
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001015 ! myotome somite 17
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000843
name: slow muscle cell somite 2
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 2" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-214
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001016 ! myotome somite 2
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000844
name: slow muscle cell somite 22
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 22" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-215
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001017 ! myotome somite 22
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000845
name: slow muscle cell somite 25
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 25" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-216
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001018 ! myotome somite 25
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000846
name: slow muscle cell somite 28
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 28" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-217
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001019 ! myotome somite 28
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000847
name: slow muscle cell somite 30
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 30" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-218
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001020 ! myotome somite 30
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000848
name: slow muscle cell somite 6
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 6" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-219
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001021 ! myotome somite 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000849
name: fast muscle cell somite 4
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 4" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-22
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000809 ! myotome somite 4
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000850
name: slow muscle cell somite 9
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 9" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-220
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001022 ! myotome somite 9
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000851
name: somite 12
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-221
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000852
name: somite 15
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-222
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000853
name: somite 18
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-223
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000854
name: somite 21
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-224
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000855
name: somite 24
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-225
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000856
name: somite 28
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-226
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000857
name: somite 4
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-227
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000858
name: somite 8
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-228
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000859
name: specialized hemal arch and spine
namespace: zebrafish_anatomy
synonym: "ha(pu)" RELATED []
synonym: "hemal arches (preural)" RELATED [ZFIN:ZDB-PUB-011008-1]
synonym: "specialized haemal arch and spine" RELATED []
synonym: "specialized hemal arches and spines" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-229
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000862 ! caudal fin skeleton
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000860
name: fast muscle cell somite 7
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 7" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-23
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000810 ! myotome somite 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000861
name: ventral oblique extraocular muscle
namespace: zebrafish_anatomy
synonym: "ventral oblique extraocular muscles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-230
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000511 ! extraocular musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000862
name: caudal fin skeleton
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-231
is_a: ZFA:0001123 ! axial fin skeleton
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001058 ! caudal fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000863
name: dermal bone cranium
namespace: zebrafish_anatomy
def: "Cranial bones that are dermally derived." [ZFIN:curator]
synonym: "dermatocranium" RELATED []
xref: ZFIN:ZDB-ANAT-020309-232
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000737 ! cranium
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000864
name: epaxial region somite 1
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-233
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000924 ! myotome somite 1
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000865
name: epaxial region somite 12
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-234
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000926 ! myotome somite 12
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000866
name: epaxial region somite 15
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-235
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000802 ! myotome somite 15
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000867
name: epaxial region somite 18
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-236
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000803 ! myotome somite 18
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000868
name: epaxial region somite 20
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-237
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000804 ! myotome somite 20
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000869
name: epaxial region somite 23
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-238
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000805 ! myotome somite 23
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000870
name: epaxial region somite 26
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-239
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000807 ! myotome somite 26
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000871
name: floor plate diencephalon
namespace: zebrafish_anatomy
synonym: "floorplate diencephalon" RELATED []
xref: ZFIN:ZDB-ANAT-020309-24
is_a: ZFA:0000022 ! floor plate
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000872
name: epaxial region somite 29
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-240
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000808 ! myotome somite 29
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000873
name: epaxial region somite 4
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-241
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000809 ! myotome somite 4
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000874
name: epaxial region somite 7
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-242
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000810 ! myotome somite 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000875
name: facial neural crest
namespace: zebrafish_anatomy
def: "Cranial neural crest that is part of the facial region." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-243
is_a: ZFA:0001194 ! cranial neural crest
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000876
name: fast muscle cell somite 11
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 11" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-244
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000801 ! myotome somite 11
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000877
name: fast muscle cell somite 14
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 14" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-245
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000044 ! myotome somite 14
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000878
name: fast muscle cell somite 17
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 17" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-246
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001015 ! myotome somite 17
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000879
name: fast muscle cell somite 2
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 2" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-247
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001016 ! myotome somite 2
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000880
name: fast muscle cell somite 22
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 22" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-248
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001017 ! myotome somite 22
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000881
name: fast muscle cell somite 25
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 25" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-249
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001018 ! myotome somite 25
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000882
name: floor plate rhombomere 1
namespace: zebrafish_anatomy
synonym: "floor plate r1" RELATED []
xref: ZFIN:ZDB-ANAT-020309-25
is_a: ZFA:0001258 ! floor plate hindbrain
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0001031 ! rhombomere 1
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000883
name: fast muscle cell somite 28
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 28" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-250
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001019 ! myotome somite 28
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000884
name: fast muscle cell somite 30
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 30" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-251
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001020 ! myotome somite 30
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000885
name: fast muscle cell somite 6
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 6" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-252
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001021 ! myotome somite 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000886
name: fast muscle cell somite 9
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 9" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-253
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001022 ! myotome somite 9
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000887
name: floor plate neural rod
namespace: zebrafish_anatomy
synonym: "floorplate neural rod" RELATED []
xref: ZFIN:ZDB-ANAT-020309-254
is_a: ZFA:0000022 ! floor plate
relationship: end ZFS:0000026 ! Segmentation:14-19 somites
relationship: part_of ZFA:0000133 ! neural rod
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000888
name: floor plate rhombomere 3
namespace: zebrafish_anatomy
synonym: "floor plate r3" RELATED []
synonym: "floorplate r3" RELATED []
xref: ZFIN:ZDB-ANAT-020309-255
is_a: ZFA:0001258 ! floor plate hindbrain
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000948 ! rhombomere 3
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000889
name: floor plate rhombomere 6
namespace: zebrafish_anatomy
synonym: "floor plate r6" RELATED []
synonym: "floorplate r6" RELATED []
xref: ZFIN:ZDB-ANAT-020309-256
is_a: ZFA:0001258 ! floor plate hindbrain
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000069 ! rhombomere 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000890
name: floor plate spinal cord
namespace: zebrafish_anatomy
synonym: "floorplate spinal cord" RELATED []
xref: ZFIN:ZDB-ANAT-020309-257
is_a: ZFA:0000022 ! floor plate
relationship: develops_from ZFA:0001434 ! floor plate neural tube
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000891
name: hypaxial region somite 1
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-258
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000924 ! myotome somite 1
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000892
name: hypaxial region somite 12
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-259
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000926 ! myotome somite 12
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000893
name: floor plate rhombomere 4
namespace: zebrafish_anatomy
synonym: "floor plate r4" RELATED []
synonym: "floorplate r4" RELATED []
xref: ZFIN:ZDB-ANAT-020309-26
is_a: ZFA:0001258 ! floor plate hindbrain
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0001032 ! rhombomere 4
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000894
name: hypaxial region somite 15
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-260
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000802 ! myotome somite 15
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000895
name: hypaxial region somite 18
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-261
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000803 ! myotome somite 18
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000896
name: hypaxial region somite 20
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-262
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000804 ! myotome somite 20
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000897
name: hypaxial region somite 23
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-263
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000805 ! myotome somite 23
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000898
name: hypaxial region somite 26
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-264
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000807 ! myotome somite 26
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000899
name: hypaxial region somite 29
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-265
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000808 ! myotome somite 29
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000900
name: hypaxial region somite 4
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-266
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000809 ! myotome somite 4
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000901
name: hypaxial region somite 7
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-267
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000810 ! myotome somite 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000902
name: hypural musculature
namespace: zebrafish_anatomy
synonym: "hypural muscles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-268
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000628 ! caudal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000903
name: interpeduncular nucleus tegmentum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-269
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000904
name: floor plate rhombomere 7
namespace: zebrafish_anatomy
synonym: "floor plate r7" RELATED []
synonym: "floorplate r7" RELATED []
xref: ZFIN:ZDB-ANAT-020309-27
is_a: ZFA:0001258 ! floor plate hindbrain
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000949 ! rhombomere 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000905
name: lateral mesenchyme derived from mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-270
is_a: ZFA:0000081 ! trunk mesenchyme
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000906
name: lateral wall midbrain
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-271
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000128 ! midbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000907
name: lateral wall rhombomere 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-272
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000822 ! rhombomere 2
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000908
name: lateral wall rhombomere 5
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-273
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000823 ! rhombomere 5
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000909
name: lateral wall rhombomere 8
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-274
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000153 ! rhombomere 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000910
name: medial forebrain bundle telencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-275
is_a: ZFA:0000597 ! telencephalic tracts
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005111 ! medial forebrain bundle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000911
name: medial pterygiophores dorsal fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-276
is_obsolete: true
[Term]
id: ZFA:0000912
name: mesenchyme median fin fold
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-278
is_a: ZFA:0000393 ! mesenchyme
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000040 ! median fin fold
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000913
name: molecular layer valvula cerebelli
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-279
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000603 ! valvula cerebelli
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000914
name: floor plate telencephalon
namespace: zebrafish_anatomy
synonym: "floorplate telencephalon" RELATED []
xref: ZFIN:ZDB-ANAT-020309-28
is_a: ZFA:0000022 ! floor plate
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000079 ! telencephalon
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000915
name: muscle pioneer somite 11
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 11" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-280
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000840 ! slow muscle cell somite 11
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000916
name: muscle pioneer somite 14
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 14" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-281
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000841 ! slow muscle cell somite 14
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000917
name: muscle pioneer somite 17
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 17" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-282
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000842 ! slow muscle cell somite 17
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000918
name: muscle pioneer somite 20
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 20" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-283
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000967 ! slow muscle cell somite 20
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000919
name: muscle pioneer somite 23
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 23" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-284
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000969 ! slow muscle cell somite 23
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000920
name: muscle pioneer somite 26
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 26" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-285
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000970 ! slow muscle cell somite 26
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000921
name: muscle pioneer somite 29
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 29" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-286
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000971 ! slow muscle cell somite 29
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000922
name: muscle pioneer somite 4
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 4" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-287
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000972 ! slow muscle cell somite 4
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000923
name: muscle pioneer somite 7
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 7" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-288
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000973 ! slow muscle cell somite 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000924
name: myotome somite 1
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-289
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000072 ! somite 1
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000925
name: hypaxial region somite 10
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-29
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001013 ! myotome somite 10
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000926
name: myotome somite 12
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-290
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000851 ! somite 12
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000927
name: myotome somite 16
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-291
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000976 ! somite 16
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000928
name: myotome somite 19
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-292
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000977 ! somite 19
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000929
name: myotome somite 21
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-293
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000854 ! somite 21
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000930
name: myotome somite 24
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-294
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000855 ! somite 24
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000931
name: myotome somite 27
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-295
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000731 ! somite 27
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000932
name: myotome somite 3
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-296
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000732 ! somite 3
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000933
name: myotome somite 5
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-297
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000073 ! somite 5
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000934
name: myotome somite 8
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-298
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000858 ! somite 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000935
name: neural crest midbrain
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-299
is_a: ZFA:0001194 ! cranial neural crest
relationship: end ZFS:0000027 ! Segmentation:20-25 somites
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000936
name: dorsal fin distal radial
namespace: zebrafish_anatomy
def: "Rod-like internal median skeletal support bones of the dorsal fin, which articulate with the lepidotrichia distally." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-3
is_a: ZFA:0001647 ! dorsal fin radial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001419 ! dorsal fin pterygiophore
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000937
name: hypaxial region somite 13
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-30
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001014 ! myotome somite 13
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000938
name: central canal
namespace: zebrafish_anatomy
synonym: "neural lumen" RELATED []
xref: ZFIN:ZDB-ANAT-020309-300
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: part_of ZFA:0001261 ! ventricular system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000939
name: middle lateral line neuromast
namespace: zebrafish_anatomy
def: "Neuromast that is part of the middle lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromast middle" RELATED []
synonym: "neuromasts middle" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-301
is_a: ZFA:0000243 ! neuromast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000344 ! middle lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000940
name: posterior lateral line neuromast
namespace: zebrafish_anatomy
def: "Neuromast that is part of the posterior lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromast posterior" RELATED []
synonym: "neuromasts posterior" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-302
is_a: ZFA:0000243 ! neuromast
relationship: develops_from ZFA:0001157 ! posterior lateral line primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000944 ! posterior lateral line
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000941
name: nucleus of the medial longitudinal fasciculus synencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-303
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000293 ! synencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000943
name: pectoral fin skeleton
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-305
is_a: ZFA:0000027 ! paired fin skeleton
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001161 ! pectoral fin
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000944
name: posterior lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "pll" RELATED []
xref: ZFIN:ZDB-ANAT-020309-306
is_a: ZFA:0001469 ! lateral line
relationship: develops_from ZFA:0001157 ! posterior lateral line primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001471 ! posterior lateral line system
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000946
name: hypaxial region somite 16
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-31
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000927 ! myotome somite 16
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000947
name: dorsal fin proximal radial
namespace: zebrafish_anatomy
def: "Rod-like internal median skeletal support bones of the dorsal fin, which articulate with the distal radials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-310
is_a: ZFA:0001647 ! dorsal fin radial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001419 ! dorsal fin pterygiophore
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000948
name: rhombomere 3
namespace: zebrafish_anatomy
def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator]
synonym: "r3" RELATED []
xref: ZFIN:ZDB-ANAT-020309-311
is_a: ZFA:0001064 ! rhombomere
relationship: develops_from ZFA:0001213 ! presumptive rhombomere 3
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000949
name: rhombomere 7
namespace: zebrafish_anatomy
def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator]
synonym: "r7" RELATED []
xref: ZFIN:ZDB-ANAT-020309-312
is_a: ZFA:0001064 ! rhombomere
relationship: develops_from ZFA:0001209 ! presumptive rhombomere 7
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000950
name: roof plate rhombomere 3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-313
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000948 ! rhombomere 3
relationship: part_of ZFA:0001311 ! roof plate rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000951
name: roof plate rhombomere 7
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-314
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000949 ! rhombomere 7
relationship: part_of ZFA:0001311 ! roof plate rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000952
name: sclerotome somite 1
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-315
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000072 ! somite 1
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000953
name: sclerotome somite 12
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-316
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000851 ! somite 12
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000954
name: sclerotome somite 15
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-317
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000852 ! somite 15
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000955
name: sclerotome somite 18
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-318
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000853 ! somite 18
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000956
name: sclerotome somite 20
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-319
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000156 ! somite 20
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000957
name: hypaxial region somite 19
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-32
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000928 ! myotome somite 19
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000958
name: sclerotome somite 23
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-320
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000730 ! somite 23
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000959
name: sclerotome somite 26
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-321
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000074 ! somite 26
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000960
name: sclerotome somite 29
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-322
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000981 ! somite 29
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000961
name: sclerotome somite 4
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-323
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000857 ! somite 4
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000962
name: sclerotome somite 7
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-324
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000733 ! somite 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000963
name: slow muscle cell somite 1
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 1" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-325
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000924 ! myotome somite 1
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000964
name: slow muscle cell somite 12
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 12" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-326
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000926 ! myotome somite 12
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000965
name: slow muscle cell somite 15
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 15" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-327
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000802 ! myotome somite 15
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000966
name: slow muscle cell somite 18
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 18" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-328
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000803 ! myotome somite 18
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000967
name: slow muscle cell somite 20
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 20" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-329
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000804 ! myotome somite 20
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000968
name: hypaxial region somite 21
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-33
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000929 ! myotome somite 21
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000969
name: slow muscle cell somite 23
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 23" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-330
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000805 ! myotome somite 23
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000970
name: slow muscle cell somite 26
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 26" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-331
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000807 ! myotome somite 26
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000971
name: slow muscle cell somite 29
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 29" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-332
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000808 ! myotome somite 29
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000972
name: slow muscle cell somite 4
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 4" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-333
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000809 ! myotome somite 4
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000973
name: slow muscle cell somite 7
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 7" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-334
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000810 ! myotome somite 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000974
name: somite 10
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-335
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000975
name: somite 13
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-336
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000976
name: somite 16
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-337
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000977
name: somite 19
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-338
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000978
name: somite 22
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-339
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000979
name: hypaxial region somite 24
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-34
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000930 ! myotome somite 24
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000980
name: somite 25
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-340
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000981
name: somite 29
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-341
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000982
name: somite 6
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-342
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000983
name: somite 9
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-343
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000984
name: superior reticular formation tegmentum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-344
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000985
name: ventral rhombencephalic commissure medulla oblongata
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-345
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000986
name: hypaxial region somite 27
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-35
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000931 ! myotome somite 27
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000987
name: hypaxial region somite 3
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-36
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000932 ! myotome somite 3
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000988
name: hypaxial region somite 5
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-37
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000933 ! myotome somite 5
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000989
name: hypaxial region somite 8
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-38
is_a: ZFA:0001085 ! hypaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000934 ! myotome somite 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000990
name: intermediate mesenchyme
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-39
is_a: ZFA:0000081 ! trunk mesenchyme
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000991
name: epaxial region somite 10
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-4
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001013 ! myotome somite 10
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000992
name: lateral migration pathway mesenchyme
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-41
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000993
name: lateral wall neural rod
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-42
relationship: end ZFS:0000026 ! Segmentation:14-19 somites
relationship: part_of ZFA:0000133 ! neural rod
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000994
name: lateral wall rhombomere 3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-43
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000948 ! rhombomere 3
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000995
name: lateral wall rhombomere 6
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-44
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000069 ! rhombomere 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000996
name: lateral wall spinal cord
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-45
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000997
name: medial funicular nucleus trigeminal nuclei
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-46
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000433 ! sensory trigeminal nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000998
name: mesenchyme derived from head mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-47
is_a: ZFA:0000113 ! head mesenchyme
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000999
name: mesenchyme derived from trunk neural crest
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-48
is_a: ZFA:0000081 ! trunk mesenchyme
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001000
name: mesenchyme pectoral fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-49
is_a: ZFA:0000393 ! mesenchyme
relationship: develops_from ZFA:0000789 ! mesoderm pectoral fin bud
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0001161 ! pectoral fin
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001001
name: epaxial region somite 13
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-5
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001014 ! myotome somite 13
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001002
name: motor axons peripheral
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-50
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000012 ! central nervous system
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001003
name: muscle pioneer somite 12
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 12" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-51
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000964 ! slow muscle cell somite 12
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001004
name: muscle pioneer somite 15
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 15" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-52
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000965 ! slow muscle cell somite 15
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001005
name: muscle pioneer somite 18
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 18" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-53
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000966 ! slow muscle cell somite 18
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001006
name: muscle pioneer somite 21
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 21" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-54
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000719 ! slow muscle cell somite 21
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001007
name: muscle pioneer somite 24
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 24" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-55
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000720 ! slow muscle cell somite 24
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001008
name: muscle pioneer somite 27
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 27" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-56
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000721 ! slow muscle cell somite 27
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001009
name: muscle pioneer somite 3
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 3" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-57
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000722 ! slow muscle cell somite 3
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001010
name: muscle pioneer somite 5
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 5" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-58
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000723 ! slow muscle cell somite 5
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001011
name: muscle pioneer somite 8
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 8" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-59
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000724 ! slow muscle cell somite 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001012
name: epaxial region somite 16
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-6
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000927 ! myotome somite 16
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001013
name: myotome somite 10
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-60
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000974 ! somite 10
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001014
name: myotome somite 13
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-61
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000975 ! somite 13
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001015
name: myotome somite 17
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-62
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000727 ! somite 17
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001016
name: myotome somite 2
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-63
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000728 ! somite 2
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001017
name: myotome somite 22
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-64
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000978 ! somite 22
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001018
name: myotome somite 25
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-65
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000980 ! somite 25
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001019
name: myotome somite 28
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-66
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000856 ! somite 28
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001020
name: myotome somite 30
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-67
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000157 ! somite 30
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001021
name: myotome somite 6
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-68
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000982 ! somite 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001022
name: myotome somite 9
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-69
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000983 ! somite 9
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001023
name: epaxial region somite 19
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-7
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000928 ! myotome somite 19
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001024
name: trunk neural crest
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-70
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000045 ! neural crest
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001025
name: occipital lateral line neuromast
namespace: zebrafish_anatomy
def: "Neuromast that is part of the occipital lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromast occipital" RELATED []
synonym: "neuromasts occipital" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-72
is_a: ZFA:0000243 ! neuromast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000400 ! occipital lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0001026
name: supraorbital lateral line neuromast
namespace: zebrafish_anatomy
def: "Neuromast that is part of the supraorbital lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromast supraorbital" RELATED []
synonym: "neuromasts supraorbital" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-73
is_a: ZFA:0000243 ! neuromast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000443 ! supraorbital lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0001027
name: oral cavity
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-74
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000590 ! oral region
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001028
name: hypurapophysis
namespace: zebrafish_anatomy
def: "The paired bony lateral extensions off the parhypural. Mabee and Bird, 2001." [ZFIN:curator]
synonym: "hypurapophyses" RELATED PLURAL []
synonym: "parhypurapophyses" RELATED []
synonym: "parhypurapophyses processes" RELATED []
xref: ZFIN:ZDB-ANAT-020309-75
is_a: ZFA:0000859 ! specialized hemal arch and spine
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000438 ! parhypural
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001029
name: inner limiting membrane
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-7
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000046 ! retinal neural layer
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001030
name: epaxial region somite 21
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-8
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000929 ! myotome somite 21
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001031
name: rhombomere 1
namespace: zebrafish_anatomy
def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator]
synonym: "r1" RELATED []
xref: ZFIN:ZDB-ANAT-020309-81
is_a: ZFA:0001064 ! rhombomere
relationship: develops_from ZFA:0001207 ! presumptive rhombomere 1
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001032
name: rhombomere 4
namespace: zebrafish_anatomy
def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator]
synonym: "r4" RELATED []
xref: ZFIN:ZDB-ANAT-020309-82
is_a: ZFA:0001064 ! rhombomere
relationship: develops_from ZFA:0001212 ! presumptive rhombomere 4
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001033
name: roof plate rhombomere 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-83
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0001031 ! rhombomere 1
relationship: part_of ZFA:0001311 ! roof plate rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001034
name: roof plate rhombomere 4
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-84
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0001032 ! rhombomere 4
relationship: part_of ZFA:0001311 ! roof plate rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001035
name: roof plate rhombomere 8
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-85
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000153 ! rhombomere 8
relationship: part_of ZFA:0001311 ! roof plate rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001036
name: sclerotome somite 10
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-86
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000974 ! somite 10
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001037
name: sclerotome somite 13
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-87
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000975 ! somite 13
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001038
name: sclerotome somite 16
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-88
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000976 ! somite 16
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001039
name: sclerotome somite 19
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-89
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000977 ! somite 19
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001040
name: epaxial region somite 24
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-9
is_a: ZFA:0001084 ! epaxial myotome region
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000930 ! myotome somite 24
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001041
name: sclerotome somite 21
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-90
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000854 ! somite 21
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001042
name: sclerotome somite 24
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-91
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000855 ! somite 24
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001043
name: sclerotome somite 27
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-92
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000731 ! somite 27
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001044
name: sclerotome somite 3
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-93
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000732 ! somite 3
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001045
name: sclerotome somite 5
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-94
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000073 ! somite 5
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001046
name: sclerotome somite 8
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-95
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000858 ! somite 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001047
name: slow muscle cell somite 10
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 10" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-96
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001013 ! myotome somite 10
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001048
name: slow muscle cell somite 13
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 13" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-97
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001014 ! myotome somite 13
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001049
name: slow muscle cell somite 16
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 16" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-98
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000927 ! myotome somite 16
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001050
name: slow muscle cell somite 19
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 19" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-99
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000928 ! myotome somite 19
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001051
name: caudal division of the internal carotid artery
namespace: zebrafish_anatomy
synonym: "CaDI" RELATED []
xref: ZFIN:ZDB-ANAT-020702-1
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0005081 ! internal carotid artery
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001052
name: primordial hindbrain channel
namespace: zebrafish_anatomy
def: "The paired vessels that run along the lateral walls of the hindbrain and drain into the anterior cardinal veins. Isogai et al. (2002)" [ZFIN:curator]
synonym: "medial head vein" RELATED []
synonym: "PHCB" RELATED []
xref: ZFIN:ZDB-ANAT-020702-10
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001267 ! cranial vasculature
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001053
name: primitive internal carotid artery
namespace: zebrafish_anatomy
synonym: "PICA" RELATED []
xref: ZFIN:ZDB-ANAT-020702-11
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001054
name: lateral dorsal aorta
namespace: zebrafish_anatomy
def: "Connect the outflow of the aortic arches to the dorsal aorta. The place where the lateral dorsal aorta fuse is is called the radiax of the aorta. Isogai et al. 2001." [ZFIN:curator]
synonym: "LDA" RELATED []
xref: ZFIN:ZDB-ANAT-020702-12
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001055
name: pronephric duct opening
namespace: zebrafish_anatomy
def: "The juncture where the pronephric ducts empty into the cloaca." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020702-13
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000150 ! pronephric duct
relationship: part_of ZFA:0000330 ! cloacal chamber
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001056
name: myotome
namespace: zebrafish_anatomy
def: "Portion of the somites giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
synonym: "myomeres" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-020702-14
is_a: ZFA:0005145 ! muscle
relationship: develops_from ZFA:0000155 ! somite
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000473 ! trunk musculature
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001057
name: intersegmental vein
namespace: zebrafish_anatomy
def: "Primary intersegmental vessels that are contacted by secondary angiogenic sprouts from the posterior cardinal vein and take on the characteristics of veins. These eventually link with other secondary sprouts from the posterior cardinal vein to form the parachordal vessel. Isogai et al. 2003.'" [ZFIN:curator]
synonym: "ISV" RELATED []
xref: ZFIN:ZDB-ANAT-020702-15
is_a: ZFA:0000082 ! vein
is_a: ZFA:0001285 ! intersegmental vessel
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0001058
name: caudal fin
namespace: zebrafish_anatomy
def: "The caudal fin is the most posterior median fin. It is composed of a complex of three modified centra and modified neural and hemal arches and spines. Mabee and Bird, 2001." [ZFIN:curator]
synonym: "tail" RELATED []
synonym: "tail fin" RELATED []
xref: ZFIN:ZDB-ANAT-020702-16
is_a: ZFA:0000108 ! fin
relationship: develops_from ZFA:0001069 ! ventral fin fold
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001117 ! post-vent region
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001059
name: cranial division of the internal carotid artery
namespace: zebrafish_anatomy
synonym: "CrDI" RELATED []
synonym: "rostral division of the internal carotid artery" RELATED []
xref: ZFIN:ZDB-ANAT-020702-17
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0005081 ! internal carotid artery
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001060
name: basidorsal
namespace: zebrafish_anatomy
def: "Basidorsals are bilaterally paired cartilages on the dorsolateral side of the notochord which are replaced by ossified neural arches or dorsal arcocentra. In otophysan fishes, basidorsal 1, bd2, bd3, and bd4 give rise to parts of the Weberian apparatus." [ZFIN:curator]
synonym: "arcualia" RELATED []
xref: ZFIN:ZDB-ANAT-060331-5
is_a: ZFA:0001457 ! postcranial axial cartilage
relationship: end ZFS:0000039 ! Larval:Days 7-13
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001061
name: intersegmental artery
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020702-19
is_a: ZFA:0000005 ! artery
is_a: ZFA:0001285 ! intersegmental vessel
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0001062
name: primitive mesencephalic artery
namespace: zebrafish_anatomy
def: "Branches dorsally from the cranial division of the internal carotid artery, then curves caudally along the dorsal medial wall of the eye capsule to drain into the PMBC just rostral to the midbrain hindbrain boundary" [ZFIN:curator]
synonym: "PMsA" RELATED []
xref: ZFIN:ZDB-ANAT-020702-2
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000032 ! Pharyngula:High-pec
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001063
name: posterior caudal vein
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020702-20
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0005037 ! tail vasculature
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001064
name: rhombomere
namespace: zebrafish_anatomy
def: "A segment of the developing hindbrain. Kimmel et al, 1995." [ZFIN:curator]
synonym: "hindbrain segment" RELATED []
synonym: "neuromeres" RELATED []
synonym: "rhombomeres" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020702-3
is_a: ZFA:0001328 ! neuromere
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000029 ! hindbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001065
name: lateral mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020702-4
relationship: end ZFS:0000027 ! Segmentation:20-25 somites
relationship: part_of ZFA:0000041 ! mesoderm
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001066
name: neural arch
namespace: zebrafish_anatomy
def: "A neural arch encloses the neural canal and typically meets its partner to form a neural spine. The neural arch can be a replacement ossification of the basidorsal cartilage or can form directly in membrane bone." [ZFIN:curator]
synonym: "dorsal arcocentrum" RELATED []
xref: ZFIN:ZDB-ANAT-060331-6
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001060 ! basidorsal
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001189 ! vertebra
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001067
name: anterior cerebral vein
namespace: zebrafish_anatomy
synonym: "ACeV" RELATED []
synonym: "rostral cerebral vein" RELATED []
xref: ZFIN:ZDB-ANAT-020702-6
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001267 ! cranial vasculature
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001068
name: mesencephalic artery
namespace: zebrafish_anatomy
def: "Develops from the proximal portion of the primitive mesencephalic artery. Isogai et al.2001." [ZFIN:curator]
synonym: "MsA" RELATED []
xref: ZFIN:ZDB-ANAT-020702-7
is_a: ZFA:0000005 ! artery
relationship: develops_from ZFA:0001062 ! primitive mesencephalic artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001069
name: ventral fin fold
namespace: zebrafish_anatomy
synonym: "tail fin fold" RELATED []
synonym: "ventral fin" RELATED []
xref: ZFIN:ZDB-ANAT-020702-8
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000040 ! median fin fold
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001070
name: presumptive pronephric mesoderm
namespace: zebrafish_anatomy
synonym: "nephron primordium" RELATED []
xref: ZFIN:ZDB-ANAT-020702-9
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0001206 ! intermediate mesoderm
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001071
name: presumptive retina
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-030922-1
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0000050 ! optic vesicle
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001072
name: thyroid follicle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-030922-10
relationship: develops_from ZFA:0001081 ! thyroid primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001158 ! endocrine system
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001073
name: axial vasculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-030922-11
is_a: ZFA:0001079 ! vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001074
name: taste bud
namespace: zebrafish_anatomy
synonym: "taste buds" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-030922-12
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001101 ! gustatory system
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001075
name: choroid fissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-030922-13
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000008 ! brain
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001076
name: intestinal bulb
namespace: zebrafish_anatomy
def: "This anteriormost portion of the intestine has the most digestive enzymes and the greatest epithelial surface area. Wallace et al, 2005." [ZFIN:curator]
synonym: "anterior intestine" RELATED []
xref: ZFIN:ZDB-ANAT-030922-14
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001338 ! intestine
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001077
name: thymus primordium
namespace: zebrafish_anatomy
def: "A small outgrowth of the pharyngeal epithelium that is the site of lymphocyte cell production. Willett et al, 1999." [ZFIN:curator]
synonym: "thymic rudiment" RELATED []
xref: ZFIN:ZDB-ANAT-030922-2
relationship: develops_from ZFA:0000818 ! vagal neural crest
relationship: develops_from ZFA:0001104 ! pharyngeal endoderm
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0001159 ! immune system
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001078
name: thymus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-030922-3
relationship: develops_from ZFA:0001077 ! thymus primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001159 ! immune system
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001079
name: vasculature
namespace: zebrafish_anatomy
synonym: "blood vessels" RELATED []
synonym: "circulatory system" RELATED []
xref: ZFIN:ZDB-ANAT-030922-4
is_a: ZFA:0001490 ! cavitated compound organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000010 ! cardiovascular system
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001080
name: sclerotome
namespace: zebrafish_anatomy
synonym: "sclerotomes" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-030922-5
relationship: develops_from ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001081
name: thyroid primordium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-030922-6
relationship: develops_from ZFA:0001104 ! pharyngeal endoderm
relationship: end ZFS:0000033 ! Hatching:Long-pec
relationship: part_of ZFA:0001158 ! endocrine system
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001082
name: chordo neural hinge
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-030922-7
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000135 ! notochord
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001083
name: ventricular zone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-030922-8
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0001261 ! ventricular system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001084
name: epaxial myotome region
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-031211-12
is_a: ZFA:0005145 ! muscle
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001056 ! myotome
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001085
name: hypaxial myotome region
namespace: zebrafish_anatomy
synonym: "hypaxial muscle" RELATED []
xref: ZFIN:ZDB-ANAT-031211-13
is_a: ZFA:0005145 ! muscle
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001056 ! myotome
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001086
name: muscle pioneer
namespace: zebrafish_anatomy
synonym: "muscle pioneers" RELATED PLURAL []
synonym: "non migratory adaxial cells" RELATED []
xref: ZFIN:ZDB-ANAT-031211-14
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0009116 ! slow muscle cell
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001089
name: myoseptum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-031211-5
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001056 ! myotome
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001093
name: unspecified
namespace: zebrafish_anatomy
def: "Annotation with this anatomy term indicates that a structure was not specified by the author." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-041102-1
is_a: ZFA:0100000 ! zebrafish anatomical entity
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0001094
name: whole organism
namespace: zebrafish_anatomy
def: "Anatomical structure that is an individual member of Danio rerio." [ZFIN:curator]
synonym: "multi-cellular organism" RELATED []
xref: CARO:0000003
xref: ZFIN:ZDB-ANAT-050228-1
is_a: ZFA:0000037 ! anatomical structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0001095
name: immature macula
namespace: zebrafish_anatomy
synonym: "immature maculae" RELATED PLURAL []
synonym: "immature sensory patch" RELATED []
synonym: "immature sensory patches" RELATED []
xref: ZFIN:ZDB-ANAT-050228-10
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0000051 ! otic vesicle
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001096
name: immature anterior macula
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-11
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0001095 ! immature macula
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001097
name: immature posterior macula
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-12
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0001095 ! immature macula
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001098
name: immature hair cell anterior macula
namespace: zebrafish_anatomy
synonym: "immature sensory hair cells anterior macula" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050228-13
is_a: ZFA:0009366 ! hair cell
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0001096 ! immature anterior macula
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001099
name: immature hair cell posterior macula
namespace: zebrafish_anatomy
synonym: "immature sensory hair cells posterior macula" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050228-14
is_a: ZFA:0009366 ! hair cell
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0001097 ! immature posterior macula
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001100
name: hepatic duct
namespace: zebrafish_anatomy
def: "A duct that carries bile from the liver to the small intestine. Crump et al, 2004." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-20
relationship: develops_from ZFA:0001104 ! pharyngeal endoderm
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000056 ! pharynx
relationship: part_of ZFA:0001306 ! pharyngeal arch
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001107
name: internal gill bud
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-21
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000056 ! pharynx
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0001108
name: anterior commissure
namespace: zebrafish_anatomy
synonym: "commissura anterior" RELATED []
synonym: "commissura rostral" RELATED []
synonym: "rostral commissure" RELATED []
xref: ZFIN:ZDB-ANAT-050228-22
is_a: ZFA:0000597 ! telencephalic tracts
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001109
name: oocyte
namespace: zebrafish_anatomy
synonym: "egg" RELATED []
xref: ZFIN:ZDB-ANAT-050228-23
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001110 ! ovarian follicle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001110
name: ovarian follicle
namespace: zebrafish_anatomy
def: "Oocyte development of zebrafish has been divided into five stages based on morphological criteria and on physiological and biochemical events. Stage I follicles (less than 140 microns) are primary growth stage, stage II follicles (140-340 microns) are cortical alveolus stage, stage III (340-690 microns) are vitellogenesis, stage IV (690-730 microns) are oocyte maturation, and stage V follicles are matured egg.Selman et al, 1993." [ZFIN:curator]
synonym: "egg follicle" RELATED []
xref: ZFIN:ZDB-ANAT-050228-24
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000403 ! ovary
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001111
name: zona radiata
namespace: zebrafish_anatomy
synonym: "vitelline envelope" RELATED []
xref: ZFIN:ZDB-ANAT-050228-25
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001110 ! ovarian follicle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001112
name: granulosa cell layer
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-26
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001110 ! ovarian follicle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001113
name: thecal cell layer
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-27
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001110 ! ovarian follicle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001114
name: head
namespace: zebrafish_anatomy
def: "Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-28
is_a: ZFA:0001308 ! organism subdivision
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001115
name: trunk
namespace: zebrafish_anatomy
def: "Organism subdivision which is the part of the body posterior to the head and anterior to the tail." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-29
is_a: ZFA:0001308 ! organism subdivision
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001116
name: presumptive structure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-3
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000032 ! Pharyngula:High-pec
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0001117
name: post-vent region
namespace: zebrafish_anatomy
def: "Organism subdivision which is the part of the body posterior to the vent which includes the anal and caudal fins." [ZFIN:curator]
synonym: "tail" RELATED []
xref: ZFIN:ZDB-ANAT-050228-30
is_a: ZFA:0001308 ! organism subdivision
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001118
name: urogenital papilla
namespace: zebrafish_anatomy
def: "A protuberance in front of the gential pore and behind the vent. Mature females have a well developed urogenital papillae whilst in mature males it is poorly developed. Brion et al, 2004." [ZFIN:curator]
synonym: "anal papilla" RELATED []
synonym: "anal papillae" RELATED []
synonym: "genital papilla" RELATED []
synonym: "UGP" RELATED []
synonym: "urogenital papillae" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050228-31
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000632 ! reproductive system
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001119
name: dermis
namespace: zebrafish_anatomy
def: "A collagenous layer of the skin subjacent to the epidermis and covering the hypodermis. It contains various types of cells (e.g. fibroblasts, pigment cells, nerve, blood vessels and scales. Le Guellec et al, 2004." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-32
relationship: develops_from ZFA:0000255 ! paraxial mesoderm
relationship: develops_from ZFA:0000787 ! mesenchyme derived from head neural crest
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000368 ! integument
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001120
name: neuroectoderm
namespace: zebrafish_anatomy
synonym: "neural ectoderm" RELATED []
synonym: "neurectoderm" RELATED []
xref: ZFIN:ZDB-ANAT-050228-33
relationship: end ZFS:0000038 ! Larval:Day 6
relationship: part_of ZFA:0000016 ! ectoderm
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001121
name: presumptive shield
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-34
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000018 ! Gastrula:Germ-ring
relationship: start ZFS:0000016 ! Blastula:30%-epiboly
[Term]
id: ZFA:0001122
name: primary germ layer
namespace: zebrafish_anatomy
synonym: "embryonic germ layers" RELATED []
xref: ZFIN:ZDB-ANAT-050228-35
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000038 ! Larval:Day 6
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001123
name: axial fin skeleton
namespace: zebrafish_anatomy
synonym: "unpaired fin skeleton" RELATED []
xref: ZFIN:ZDB-ANAT-050228-36
is_a: ZFA:0000317 ! postcranial axial skeleton
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0001124
name: dorsal fin skeleton
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-37
is_a: ZFA:0001123 ! axial fin skeleton
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001173 ! dorsal fin
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001125
name: organizer inducing center
namespace: zebrafish_anatomy
def: "The dorsal marginal region of the YSL where maternal dorsal determinants localize. Participates in positioning the shield. Ho et al, 1999." [ZFIN:curator]
synonym: "Nieuwkoop center" RELATED []
xref: ZFIN:ZDB-ANAT-050228-38
relationship: end ZFS:0000019 ! Gastrula:Shield
relationship: part_of ZFA:0000088 ! YSL
relationship: start ZFS:0000012 ! Blastula:High
[Term]
id: ZFA:0001126
name: noninvoluting endocytic marginal cell cluster
namespace: zebrafish_anatomy
def: "The NEM cell cluster lies in a superficial position of the dorsal blastoderm margin encompassing EVL cells and one or two layers of underlying deep cells. Unlike other marginal blastomeres, cells in this cluster do not participate in involution. Cooper et al, 1996." [ZFIN:curator]
synonym: "NEM" RELATED []
synonym: "noninvoluting endocytic marginal cells" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050228-39
relationship: end ZFS:0000017 ! Gastrula:50%-epiboly
relationship: part_of ZFA:0000038 ! margin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001127
name: visual system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-4
is_a: ZFA:0000282 ! sensory system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001128
name: pharyngeal pouch 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-40
is_a: ZFA:0001106 ! pharyngeal pouch
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001129
name: pharyngeal pouches 2-6
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-41
is_a: ZFA:0001106 ! pharyngeal pouch
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001130
name: pharyngeal pouch 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-42
is_a: ZFA:0001129 ! pharyngeal pouches 2-6
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001131
name: pharyngeal pouch 3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-43
is_a: ZFA:0001129 ! pharyngeal pouches 2-6
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001132
name: pharyngeal pouch 6
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-44
is_a: ZFA:0001129 ! pharyngeal pouches 2-6
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001133
name: pharyngeal pouch 5
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-45
is_a: ZFA:0001129 ! pharyngeal pouches 2-6
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001134
name: pharyngeal pouch 4
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-46
is_a: ZFA:0001129 ! pharyngeal pouches 2-6
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001135
name: neural tube
namespace: zebrafish_anatomy
synonym: "presumptive central nervous system" RELATED []
xref: ZFIN:ZDB-ANAT-050228-47
is_a: ZFA:0001120 ! neuroectoderm
relationship: develops_from ZFA:0000133 ! neural rod
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001136
name: hypodermis
namespace: zebrafish_anatomy
def: "A layer separating the inner face of the dermis from the subjacent muscle cells. It is covered on both sides by a basement membrane. It contains pigment cells. Le Guellec et al, 2004." [ZFIN:curator]
synonym: "subcutis" RELATED []
xref: ZFIN:ZDB-ANAT-050228-48
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000368 ! integument
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001137
name: ventral tooth row
namespace: zebrafish_anatomy
def: "Tooth row that is the ventralmost row of teeth on ceratobranchial 5 bone." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-49
is_a: ZFA:0001642 ! tooth row
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001138
name: vestibuloauditory system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-5
is_a: ZFA:0000282 ! sensory system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001139
name: mediodorsal tooth row
namespace: zebrafish_anatomy
def: "Tooth row that is the mediodorsal row of teeth on ceratobranchial 5 bone, located between the dorsal tooth row and ventral tooth row." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-50
is_a: ZFA:0001642 ! tooth row
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001140
name: dorsal tooth row
namespace: zebrafish_anatomy
def: "Tooth row that is the dorsalmost row of teeth on ceratobranchial 5 bone." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-51
is_a: ZFA:0001642 ! tooth row
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001141
name: tooth 1V
namespace: zebrafish_anatomy
def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the ventral tooth row." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-52
is_a: ZFA:0000694 ! ceratobranchial 5 tooth
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001137 ! ventral tooth row
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001142
name: tooth 5V
namespace: zebrafish_anatomy
def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the ventral tooth row." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-53
is_a: ZFA:0000694 ! ceratobranchial 5 tooth
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001137 ! ventral tooth row
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001143
name: tooth 4V
namespace: zebrafish_anatomy
def: "Ceratobranchial 5 tooth which is posterior to tooth 3V and anterior to tooth 5V in the ventral tooth row." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-54
is_a: ZFA:0000694 ! ceratobranchial 5 tooth
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001137 ! ventral tooth row
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001144
name: tooth 2V
namespace: zebrafish_anatomy
def: "Ceratobranchial 5 tooth which is posterior to tooth 1V and anterior to tooth 3V in the ventral tooth row." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-55
is_a: ZFA:0000694 ! ceratobranchial 5 tooth
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001137 ! ventral tooth row
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001145
name: tooth 3V
namespace: zebrafish_anatomy
def: "Ceratobranchial 5 tooth which is posterior to tooth 2V and anterior to tooth 4V in the ventral tooth row." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-56
is_a: ZFA:0000694 ! ceratobranchial 5 tooth
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001137 ! ventral tooth row
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001146
name: tooth 1MD
namespace: zebrafish_anatomy
def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the mediodorsal tooth row." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-57
is_a: ZFA:0000694 ! ceratobranchial 5 tooth
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001139 ! mediodorsal tooth row
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001147
name: tooth 2MD
namespace: zebrafish_anatomy
def: "Ceratobranchial 5 tooth which is posterior to tooth 1MD and anterior to tooth 3MD in the mediodorsal tooth row." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-58
is_a: ZFA:0000694 ! ceratobranchial 5 tooth
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001139 ! mediodorsal tooth row
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001148
name: tooth 1D
namespace: zebrafish_anatomy
def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the dorsal tooth row." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-59
is_a: ZFA:0000694 ! ceratobranchial 5 tooth
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001140 ! dorsal tooth row
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001149
name: olfactory system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-6
is_a: ZFA:0000282 ! sensory system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001150
name: tooth 2D
namespace: zebrafish_anatomy
def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the dorsal tooth row." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-60
is_a: ZFA:0000694 ! ceratobranchial 5 tooth
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001140 ! dorsal tooth row
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001151
name: tooth 4MD
namespace: zebrafish_anatomy
def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the mediodorsal tooth row." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-61
is_a: ZFA:0000694 ! ceratobranchial 5 tooth
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001139 ! mediodorsal tooth row
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001152
name: tooth 3MD
namespace: zebrafish_anatomy
def: "Ceratobranchial 5 tooth which is posterior to tooth 2MD and anterior to tooth 4MD in the mediodorsal tooth row." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-62
is_a: ZFA:0000694 ! ceratobranchial 5 tooth
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001139 ! mediodorsal tooth row
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001153
name: tooth placode
namespace: zebrafish_anatomy
def: "Placode that develops into a tooth. The placode is a thickening of the pharyngeal epithelium." [ZFIN:curator]
synonym: "dental primordium" RELATED []
synonym: "tooth germ" RELATED []
xref: ZFIN:ZDB-ANAT-050228-63
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001174 ! pharyngeal epithelium
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001154
name: anal fin musculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-64
is_a: ZFA:0000207 ! fin musculature
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001162 ! anal fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001155
name: enteric nervous system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-65
is_a: ZFA:0001574 ! autonomic nervous system
relationship: develops_from ZFA:0001334 ! presumptive enteric nervous system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001156
name: posterior lateral line placode
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-66
is_a: ZFA:0001310 ! dorsolateral placode
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0001471 ! posterior lateral line system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001157
name: posterior lateral line primordium
namespace: zebrafish_anatomy
def: "A migrating group of cells originating from the posterior lateral line placode. The primordium deposits seven to nine neuromasts and interneuromasts between them during its posterior migration to the tail. Gompel et al, 2001." [ZFIN:curator]
synonym: "posterior lateral line primordia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050228-67
is_a: ZFA:0000228 ! lateral line primordium
relationship: develops_from ZFA:0001156 ! posterior lateral line placode
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0001471 ! posterior lateral line system
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001158
name: endocrine system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-7
is_a: ZFA:0001439 ! anatomical system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001159
name: immune system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-8
is_a: ZFA:0001439 ! anatomical system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001160
name: adult
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-9
is_obsolete: true
[Term]
id: ZFA:0001161
name: pectoral fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050304-1
is_a: ZFA:0000108 ! fin
relationship: develops_from ZFA:0000141 ! pectoral fin bud
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001162
name: anal fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-1
is_a: ZFA:0000108 ! fin
relationship: develops_from ZFA:0001069 ! ventral fin fold
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001117 ! post-vent region
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001163
name: supraneural 7
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-10
is_a: ZFA:0001397 ! post-Weberian supraneural
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001164
name: supraneural 6
namespace: zebrafish_anatomy
synonym: "sn6" RELATED []
xref: ZFIN:ZDB-ANAT-050420-11
is_a: ZFA:0001397 ! post-Weberian supraneural
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001165
name: supraneural 5
namespace: zebrafish_anatomy
synonym: "sn5" RELATED []
xref: ZFIN:ZDB-ANAT-050420-12
is_a: ZFA:0001397 ! post-Weberian supraneural
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001166
name: supraneural 9
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-13
is_a: ZFA:0001397 ! post-Weberian supraneural
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001167
name: vertebra 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-14
is_a: ZFA:0001190 ! Weberian vertebra
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001168
name: vertebra 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-15
is_a: ZFA:0001190 ! Weberian vertebra
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001169
name: vertebra 3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-16
is_a: ZFA:0001190 ! Weberian vertebra
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001170
name: vertebra 4
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-17
is_a: ZFA:0001190 ! Weberian vertebra
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001171
name: os suspensorium
namespace: zebrafish_anatomy
def: "Separate ossification from the parapophysis of the fourth vertebra; develops ventrally to curve around the anterior head of the swim bladder. Often termed a fifth Weberian ossicle. Bird and Mabee, 2003." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050420-18
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000461 ! Weberian ossicle
relationship: part_of ZFA:0001170 ! vertebra 4
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001172
name: roofing cartilage
namespace: zebrafish_anatomy
def: "Cartilaginous larval structure dorsal to the four anterior-most vertebrae, which forms the connection between neural arches and supraneurals in the Weberian apparatus. Bird and Mabee, 2003." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050420-19
is_a: ZFA:0001457 ! postcranial axial cartilage
relationship: end ZFS:0000041 ! Larval:Days 21-29
relationship: part_of ZFA:0001191 ! supraneural 2
relationship: part_of ZFA:0001192 ! supraneural 3
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001173
name: dorsal fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-2
is_a: ZFA:0000108 ! fin
relationship: develops_from ZFA:0000102 ! dorsal fin fold
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001174
name: pharyngeal epithelium
namespace: zebrafish_anatomy
def: "Epithelium lining the pharynx consisting largely of simple columnar epithelium with a short segment (1mm) of stratified squamous epithelium on the ventral side. Chen et al, 2007." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050420-20
is_a: ZFA:0001495 ! unilaminar epithelium
relationship: develops_from ZFA:0001104 ! pharyngeal endoderm
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000056 ! pharynx
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001175
name: blastodisc
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-21
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000015 ! Blastula:Dome
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0001176
name: blastoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-22
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0001175 ! blastodisc
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: start ZFS:0000016 ! Blastula:30%-epiboly
[Term]
id: ZFA:0001177
name: roof plate spinal cord
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-23
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001178
name: non neural ectoderm
namespace: zebrafish_anatomy
synonym: "ventral ectoderm" RELATED []
xref: ZFIN:ZDB-ANAT-050420-24
relationship: end ZFS:0000027 ! Segmentation:20-25 somites
relationship: part_of ZFA:0000016 ! ectoderm
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001179
name: epidermal superficial stratum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-25
relationship: develops_from ZFA:0001185 ! periderm
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000105 ! epidermis
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001180
name: epidermal basal stratum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-26
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000105 ! epidermis
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001181
name: epidermal intermediate stratum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-27
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000105 ! epidermis
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0001182
name: dermal deep region
namespace: zebrafish_anatomy
def: "Portion of the dermis characterized by a well-arranged, plywood-like, collagenous network. Le Guellec et al, 2004." [ZFIN:curator]
synonym: "stratum compactum" RELATED []
xref: ZFIN:ZDB-ANAT-050420-28
relationship: develops_from ZFA:0001186 ! collagenous dermal stroma
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001119 ! dermis
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0001183
name: dermal superficial region
namespace: zebrafish_anatomy
synonym: "stratum laxum" RELATED []
xref: ZFIN:ZDB-ANAT-050420-29
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001119 ! dermis
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001184
name: pelvic fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-3
is_a: ZFA:0000108 ! fin
relationship: develops_from ZFA:0001384 ! pelvic fin bud
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001185
name: periderm
namespace: zebrafish_anatomy
def: "The outermost epidermal layer covering the fish at embryonic stages; derived from the EVL and thought to eventually be replaced by the superficial stratum of the epidermis. Sometimes used synonymously with EVL. Le Guellec et al, 2004." [ZFIN:curator]
synonym: "EVL" RELATED []
xref: ZFIN:ZDB-ANAT-050420-30
is_a: ZFA:0001486 ! epithelium
relationship: develops_from ZFA:0000086 ! EVL
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0000016 ! ectoderm
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001186
name: collagenous dermal stroma
namespace: zebrafish_anatomy
def: "A layer of collagen fibrils present in the imature integument in an acellular subepidermal space. At first, the fibrils are all oriented in the same direction, later they form the complex plywood-like structure that is characteristic of the dermal deep region. Le Guellec et al, 2004." [ZFIN:curator]
synonym: "primary dermal stroma" RELATED []
xref: ZFIN:ZDB-ANAT-050420-31
relationship: end ZFS:0000041 ! Larval:Days 21-29
relationship: part_of ZFA:0001119 ! dermis
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001187
name: presumptive midbrain hindbrain boundary
namespace: zebrafish_anatomy
synonym: "MHB" RELATED []
xref: ZFIN:ZDB-ANAT-050420-32
relationship: end ZFS:0000020 ! Gastrula:75%-epiboly
relationship: part_of ZFA:0000146 ! presumptive brain
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001188
name: Weberian apparatus
namespace: zebrafish_anatomy
def: "The Weberian apparatus consists of the modified anteriormost four vertebrae and associated structures of otophysans which transduce sound or pressure waves from the tunica externa of the swimbladder to the inner ear (Alexander, 1962)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050420-4
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001559 ! vertebral column
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001189
name: vertebra
namespace: zebrafish_anatomy
def: "All serially repeated ossified, cartilaginous, and ligamentous elements around the notochord (Schultze and Arratia, 1988)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050420-5
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001559 ! vertebral column
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001190
name: Weberian vertebra
namespace: zebrafish_anatomy
def: "The first four vertebrae, which are part of the Weberian apparatus." [ZFIN:curator]
synonym: "Weberian vertebrae" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050420-6
is_a: ZFA:0000263 ! precaudal vertebra
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001188 ! Weberian apparatus
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001191
name: supraneural 2
namespace: zebrafish_anatomy
def: "Supraneural 2 is an ovoid cartilage or cartilage replacement bone located above centrum 2. It forms an immovable joint with supraneural 3 and contributes to the neural complex roofing the neural canal." [ZFIN:curator]
synonym: "small supraneural" RELATED []
synonym: "sn2" RELATED []
xref: ZFIN:ZDB-ANAT-050420-7
is_a: ZFA:0000442 ! supraneural
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001363 ! neural complex
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001192
name: supraneural 3
namespace: zebrafish_anatomy
def: "Supraneural 3 is an elongated cartilage or cartilage replacement bone above vertebrae 3 and 4, developmentally fusing with NA 3 and 4. A crest or blade of membrane bone forms from its dorsal surface." [ZFIN:curator]
synonym: "large supraneural" RELATED []
synonym: "sn3" RELATED []
xref: ZFIN:ZDB-ANAT-050420-8
is_a: ZFA:0000442 ! supraneural
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001363 ! neural complex
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001193
name: supraneural 8
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-9
is_a: ZFA:0001397 ! post-Weberian supraneural
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001194
name: cranial neural crest
namespace: zebrafish_anatomy
def: "Neural crest that is part of the head." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-1
is_a: ZFA:0000045 ! neural crest
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001195
name: pars anterior
namespace: zebrafish_anatomy
synonym: "pars distalis" RELATED []
xref: ZFIN:ZDB-ANAT-050711-10
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001282 ! adenohypophysis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001196
name: pars tuberalis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-11
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001282 ! adenohypophysis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001197
name: pars intermedia
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-12
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001282 ! adenohypophysis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001198
name: adenohypophyseal placode
namespace: zebrafish_anatomy
synonym: "pituitary placode" RELATED []
xref: ZFIN:ZDB-ANAT-050711-13
relationship: develops_from ZFA:0001178 ! non neural ectoderm
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001199
name: infundibulum
namespace: zebrafish_anatomy
def: "A short stalk connecting the pituitary with the brain. Axons of secretory cells in the floor of the diencephalon traverse the infundibulum and terminate in the neurohypophysis." [ZFIN:curator]
synonym: "hypophysial stalk" RELATED []
synonym: "infundibulum of hypothalamus" RELATED []
synonym: "pituitary stalk" RELATED []
xref: ZFIN:ZDB-ANAT-050711-14
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001200
name: corpuscles of Stannius
namespace: zebrafish_anatomy
def: "Islands of eosinic cells found on the lateroventral surface of the kidney. Function is thought to be that of the parathyroid gland in other vertebrates, which are lacking in fishes. These cells secrete hypocalcin (teleocalcin) to regulate calcium metabolism." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-15
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000529 ! kidney
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001201
name: ventral lateral mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-16
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000083 ! ventral mesoderm
relationship: start ZFS:0000021 ! Gastrula:90%-epiboly
[Term]
id: ZFA:0001202
name: optic cup
namespace: zebrafish_anatomy
synonym: "eye cup" RELATED []
xref: ZFIN:ZDB-ANAT-050711-17
relationship: develops_from ZFA:0000050 ! optic vesicle
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000107 ! eye
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001203
name: ciliary body
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-18
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001202 ! optic cup
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001204
name: axial mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-19
relationship: develops_from ZFA:0001378 ! axial hypoblast
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000041 ! mesoderm
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001205
name: Meckel's cartilage
namespace: zebrafish_anatomy
def: "Meckel's cartilage is the bilaterally paired, rod-like, cartilaginous ventral component of the lower jar, or ventral mandibular arch. It is typically resorbed in adults." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-2
is_a: ZFA:0001460 ! pharyngeal arch cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001273 ! ventral mandibular arch
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001206
name: intermediate mesoderm
namespace: zebrafish_anatomy
synonym: "IM" RELATED []
xref: ZFIN:ZDB-ANAT-050711-20
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000041 ! mesoderm
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001207
name: presumptive rhombomere 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-21
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0007029 ! hindbrain neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001208
name: presumptive rhombomere 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-22
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0007029 ! hindbrain neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001209
name: presumptive rhombomere 7
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-23
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0007029 ! hindbrain neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001210
name: presumptive rhombomere 6
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-24
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0007029 ! hindbrain neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001211
name: presumptive rhombomere 5
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-25
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0007029 ! hindbrain neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001212
name: presumptive rhombomere 4
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-26
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0007029 ! hindbrain neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001213
name: presumptive rhombomere 3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-27
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0007029 ! hindbrain neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001214
name: presumptive rhombomere 8
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-28
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0007029 ! hindbrain neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001215
name: thalamus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-29
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001216
name: splanchnocranium
namespace: zebrafish_anatomy
def: "Regional skeletal system of the jaws, hyoid and branchial arches." [ZFIN:curator]
synonym: "pharyngeal arch skeleton" RELATED []
synonym: "pharyngeal skeleton" RELATED []
xref: ZFIN:ZDB-ANAT-050711-3
is_a: ZFA:0000737 ! cranium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001306 ! pharyngeal arch
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001217
name: presumptive hypochord
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-30
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001218
name: presumptive floor plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-31
relationship: end ZFS:0000023 ! Segmentation:1-4 somites
relationship: part_of ZFA:0000132 ! neural plate
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001220
name: copula
namespace: zebrafish_anatomy
def: "Median cartilaginous elements that are the precursors of the basibranchials. They are not assigned to specific branchial arch numbers." [ZFIN:curator]
synonym: "copulae" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050711-33
is_a: ZFA:0001460 ! pharyngeal arch cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0001221
name: copula 1
namespace: zebrafish_anatomy
def: "A long slender cartilage extending along the midline from the posterior tip of the basihyal to between the third hypobranchials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-34
is_a: ZFA:0001220 ! copula
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0001222
name: copula 2
namespace: zebrafish_anatomy
def: "A cartilage extending from the posterior tip of copula 1 to the anterior tips of the fifth ceratobranchials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-35
is_a: ZFA:0001220 ! copula
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001223
name: basibranchial 1
namespace: zebrafish_anatomy
def: "Basibranchial 1 ossifies posterior to the basihyal and anterior to the first hypobranchials in copula 1 (7.6 mm) ." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-36
is_a: ZFA:0000170 ! basibranchial
relationship: develops_from ZFA:0001221 ! copula 1
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001224
name: basibranchial 2
namespace: zebrafish_anatomy
def: "Basibranchial 2 ossifies in copula 1 posterior to the first hypobranchials and anterior to the second hypobranchials (6.8 mm). It is the first of the three basibranchials to ossify." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-37
is_a: ZFA:0000170 ! basibranchial
relationship: develops_from ZFA:0001221 ! copula 1
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001225
name: basibranchial 3
namespace: zebrafish_anatomy
def: "Basibranchial 3 ossifies in copula 1 posterior to the second hypobranchials and anterior to the third hypobranchials (7.6 mm). Cartilage pads, remnants of copula 1, remain between adjacent basibranchials in the adult." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-38
is_a: ZFA:0000170 ! basibranchial
relationship: develops_from ZFA:0001221 ! copula 1
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001226
name: basibranchial 4
namespace: zebrafish_anatomy
def: "Occasionally, a fourth basibranchial ossifies in the narrow copula 2 cartilage, which lies posterior to the third basibranchial and anterior to the anteromedial articulation of the fifth ceratobranchials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-39
is_a: ZFA:0000170 ! basibranchial
relationship: develops_from ZFA:0001222 ! copula 2
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0001227
name: mandibular arch
namespace: zebrafish_anatomy
def: "Skeletal and cartilagenous elements of the first pharyngeal arch." [ZFIN:curator]
synonym: "jaw cartilage" RELATED []
synonym: "jaws" RELATED []
synonym: "oral jaw skeleton" RELATED []
synonym: "pharyngeal arch 1 skeleton" RELATED []
synonym: "visceral arch 1" RELATED []
xref: ZFIN:ZDB-ANAT-050711-4
is_a: ZFA:0001216 ! splanchnocranium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001612 ! pharyngeal arch 1
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001228
name: pharyngeal arch 3 skeleton
namespace: zebrafish_anatomy
synonym: "branchial arch 1" RELATED []
synonym: "gill arch 1" RELATED []
synonym: "visceral arch 3" RELATED []
xref: ZFIN:ZDB-ANAT-050711-40
is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001606 ! pharyngeal arch 3
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001229
name: pharyngeal arch 7 skeleton
namespace: zebrafish_anatomy
synonym: "branchial arch 5" RELATED []
synonym: "gill arch 5" RELATED []
synonym: "visceral arch 7" RELATED []
xref: ZFIN:ZDB-ANAT-050711-41
is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001610 ! pharyngeal arch 7
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001230
name: pharyngeal arch 6 skeleton
namespace: zebrafish_anatomy
synonym: "branchial arch 4" RELATED []
synonym: "gill arch 4" RELATED []
synonym: "visceral arch 6" RELATED []
xref: ZFIN:ZDB-ANAT-050711-42
is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001609 ! pharyngeal arch 6
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001231
name: pharyngeal arch 4 skeleton
namespace: zebrafish_anatomy
synonym: "branchial arch 2" RELATED []
synonym: "gill arch 2" RELATED []
synonym: "visceral arch 4" RELATED []
xref: ZFIN:ZDB-ANAT-050711-43
is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001607 ! pharyngeal arch 4
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001232
name: pharyngeal arch 5 skeleton
namespace: zebrafish_anatomy
synonym: "branchial arch 3" RELATED []
synonym: "gill arch 3" RELATED []
synonym: "visceral arch 5" RELATED []
xref: ZFIN:ZDB-ANAT-050711-44
is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001608 ! pharyngeal arch 5
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001233
name: hypobranchial 1 bone
namespace: zebrafish_anatomy
def: "Hypobranchial ossifications 1-3 develop in the small hypobranchial cartilages that lie between the medial tips of the ceratobranchials and copula 1. The first and second hypobranchials are small and irregular in shape; one or both ossifications are absent in some adults." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-45
is_a: ZFA:0000363 ! hypobranchial bone
relationship: develops_from ZFA:0001524 ! hypobranchial 1 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001234
name: hypobranchial 4 bone
namespace: zebrafish_anatomy
def: "Tiny hypobranchial4 cartilages appear at anteromedial tips of ceratobranchial 4; these are not obviously present in mature specimens, due either to resorbtion or fusion to the cartilaginous anterior tip of ceratobranchial." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-46
is_a: ZFA:0000363 ! hypobranchial bone
relationship: develops_from ZFA:0001523 ! hypobranchial 4 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001235
name: hypobranchial 3 bone
namespace: zebrafish_anatomy
def: "Hypobranchial ossifications 1-3 develop in the small hypobranchial cartilages that lie between the medial tips of the ceratobranchials and copula 1. The first and second hypobranchials are small and irregular in shape; one or both ossifications are absent in some adults." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-47
is_a: ZFA:0000363 ! hypobranchial bone
relationship: develops_from ZFA:0001526 ! hypobranchial 3 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001236
name: hypobranchial 2 bone
namespace: zebrafish_anatomy
def: "Hypobranchial ossifications 1-3 develop in the small hypobranchial cartilages that lie between the medial tips of the ceratobranchials and copula 1. The first and second hypobranchials are small and irregular in shape; one or both ossifications are absent in some adults." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-48
is_a: ZFA:0000363 ! hypobranchial bone
relationship: develops_from ZFA:0001525 ! hypobranchial 2 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001237
name: ceratobranchial 1 bone
namespace: zebrafish_anatomy
def: "Anteromedially ceratobranchials 1-3 articulate with hypobranchials 1-3; medially they articulate with the cartilage between the basibranchials. Posterolaterally ceratobranchials 1-4 articulate with epibranchials 1-4. Gill rakers are present on the anterior and posterior margins of ceratobranchials 1-4." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-49
is_a: ZFA:0000488 ! ceratobranchial bone
relationship: develops_from ZFA:0001520 ! ceratobranchial 1 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001238
name: iris
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-5
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001202 ! optic cup
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001239
name: ceratobranchial 5 bone
namespace: zebrafish_anatomy
def: "Ceratobranchial 5 ossifies before ceratobranchials 1-4. In the adult, ceratobranchial 5 is heavily ossified and crescent-shaped with two to three rows of posteromedially directed teeth. The anteroventral tips of ceratobranchials 5 meet medially and are ligamentously joined." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-50
is_a: ZFA:0000488 ! ceratobranchial bone
relationship: develops_from ZFA:0001521 ! ceratobranchial 5 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001240
name: ceratobranchial 4 bone
namespace: zebrafish_anatomy
def: "Ceratobranchial 4 articulates with copula 2 medially. Posterolaterally ceratobranchials 1-4 articulate with epibranchials 1-4. Gill rakers are present on the anterior and posterior margins of ceratobranchials 1-4" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-51
is_a: ZFA:0000488 ! ceratobranchial bone
relationship: develops_from ZFA:0001519 ! ceratobranchial 4 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001241
name: ceratobranchial 3 bone
namespace: zebrafish_anatomy
def: "Anteromedially ceratobranchials 1-3 articulate with hypobranchials 1-3; medially they articulate with the cartilage between the basibranchials. Posterolaterally ceratobranchials 1-4 articulate with epibranchials 1-4. Gill rakers are present on the anterior and posterior margins of ceratobranchials 1-4" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-52
is_a: ZFA:0000488 ! ceratobranchial bone
relationship: develops_from ZFA:0001518 ! ceratobranchial 3 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001242
name: ceratobranchial 2 bone
namespace: zebrafish_anatomy
def: "Anteromedially ceratobranchials 1-3 articulate with hypobranchials 1-3; medially they articulate with the cartilage between the basibranchials. Posterolaterally ceratobranchials 1-4 articulate with epibranchials 1-4. Gill rakers are present on the anterior and posterior margins of ceratobranchials 1-4" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-53
is_a: ZFA:0000488 ! ceratobranchial bone
relationship: develops_from ZFA:0001517 ! ceratobranchial 2 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001243
name: epibranchial 1 bone
namespace: zebrafish_anatomy
def: "The narrowed medial end of epibranchial 1 articulates through cartilage with pharyngobranchial 1." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-54
is_a: ZFA:0000658 ! epibranchial bone
relationship: develops_from ZFA:0001528 ! epibranchial 1 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0001244
name: epibranchial 5
namespace: zebrafish_anatomy
def: "Epibranchial 5 appears as a separate center of chondrification (6.2 mm) posterior to the lateral tip of epibranchial 4 and immediately anterior to the upper end of ceratobranchial 5. In the adult, epibranchial 5 persists as a small, cartilaginous rod extending from the cartilaginous junction of the posterodorsal tip of the uncinate process of epibranchial 4 and tip of ceratobranchial5, to the cartilaginous junction of ceratobranchial 4 and epibranchial4." [ZFIN:curator]
synonym: "interbranchial IV" RELATED []
xref: ZFIN:ZDB-ANAT-050711-55
is_a: ZFA:0001527 ! epibranchial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001245
name: epibranchial 4 bone
namespace: zebrafish_anatomy
def: "The narrow end of epibranchial4 is slightly flared, and it articulates with cartilaginous pharyngobranchial4." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-56
is_a: ZFA:0000658 ! epibranchial bone
relationship: develops_from ZFA:0001531 ! epibranchial 4 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001246
name: epibranchial 2 bone
namespace: zebrafish_anatomy
def: "The flared medial end of epibranchial 2 articulates with bifurcate lateral projections from pharyngobranchial 1." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-57
is_a: ZFA:0000658 ! epibranchial bone
relationship: develops_from ZFA:0001530 ! epibranchial 2 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0001247
name: epibranchial 3 bone
namespace: zebrafish_anatomy
def: "The flared medial end of epibranchial3 articulates with the posterolateral edge of pharyngobranchial2 + 3." [ZFIN:curator]
synonym: "infrapharyngobranchial 3" RELATED []
xref: ZFIN:ZDB-ANAT-050711-58
is_a: ZFA:0000658 ! epibranchial bone
relationship: develops_from ZFA:0001529 ! epibranchial 3 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001248
name: pharyngobranchial 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-59
is_obsolete: true
[Term]
id: ZFA:0001249
name: exocrine pancreas
namespace: zebrafish_anatomy
def: "The exocrine pancreas is composed of acinar epithelial cells and ductal epithelium that manufacture the proteolytic enzymes and bicarbonate required for digestion." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-6
relationship: develops_from ZFA:0001369 ! anterior pancreatic bud
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000140 ! pancreas
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001250
name: pharyngobranchial 2 bone
namespace: zebrafish_anatomy
def: "Pharyngobranchial 2 (misidentified as pharyngobranchial 1 in Cubbage and Mabee, 1993 and Mayden 1989) is present and separate from pharyngobranchial 3. It (8.0 mm) ossifies after pharyngobranchial 3. In the adult, the cartilaginous anterior end of the ossified pharyngobranchial 2 articulates with the cartilaginous medial tip of epibranchial 1. It articulates anterolaterally and posterolaterally with the anterior and posterior cartilaginous tips of epibranchial2. In Cyprinidae pb3 overlaps pb2 (Siebert, 1987; Cavender & Coburn, 1992) but does not fuse to it." [ZFIN:curator]
synonym: "infrapharyngobranchial 2" RELATED []
xref: ZFIN:ZDB-ANAT-050711-60
is_a: ZFA:0000527 ! pharyngobranchial bone
relationship: develops_from ZFA:0001536 ! pharyngobranchial 2 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001251
name: pharyngobranchial 4 cartilage
namespace: zebrafish_anatomy
def: "Pharyngobranchial cartilage which forms in close proximity to or fused with pharyngobranchial 3; may not be distinguishable as a separate element in the adult. Remains cartilaginous." [ZFIN:curator]
synonym: "infrapharyngobranchials" RELATED []
xref: ZFIN:ZDB-ANAT-050711-61
is_a: ZFA:0001533 ! pharyngobranchial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001252
name: pharyngobranchial 3 bone
namespace: zebrafish_anatomy
def: "Pharyngobranchial bone of the fifth pharyngeal arch that lies approximately posteromedial to epibranchial 2 and medial to epibranchial 3." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-62
is_a: ZFA:0000527 ! pharyngobranchial bone
relationship: develops_from ZFA:0001534 ! pharyngobranchial 3 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0001253
name: pharyngobranchial 2+3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-63
is_obsolete: true
[Term]
id: ZFA:0001254
name: cranial motoneurons
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-64
is_obsolete: true
[Term]
id: ZFA:0001256
name: lateral floor plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-66
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000022 ! floor plate
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001257
name: medial floor plate
namespace: zebrafish_anatomy
def: "The medial portion of the spinal cord floor plate, located adjacent to the notochord." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-67
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000022 ! floor plate
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001258
name: floor plate hindbrain
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-68
is_a: ZFA:0000022 ! floor plate
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000029 ! hindbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001259
name: forebrain ventricle
namespace: zebrafish_anatomy
synonym: "forebrain vesicle" RELATED []
synonym: "prosencephalic ventricle" RELATED []
xref: ZFIN:ZDB-ANAT-050711-69
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000109 ! forebrain
relationship: part_of ZFA:0001261 ! ventricular system
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001260
name: endocrine pancreas
namespace: zebrafish_anatomy
def: "The zebrafish endocrine pancreas is composed of small groups of islet cells that are distributed throughout the exocrine pancreas. The islet cells produce insulin, glucagon and somatostatin." [ZFIN:curator]
synonym: "pancreatic islet" RELATED []
xref: ZFIN:ZDB-ANAT-050711-7
relationship: develops_from ZFA:0001370 ! posterior pancreatic bud
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000140 ! pancreas
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001261
name: ventricular system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-70
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000012 ! central nervous system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001262
name: gonad primordium
namespace: zebrafish_anatomy
def: "Immature reproductive tissue that has not undergone final maturation into either testis or ovary. During gonadal development, the gonad may be transiently intersexual where there is a parallel presence of both oocytes and spermatocytes. Selman et al, 1993." [ZFIN:curator]
synonym: "previtillogenic ovarian follicle" RELATED []
xref: ZFIN:ZDB-ANAT-050711-72
is_a: ZFA:0001110 ! ovarian follicle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001264
name: ovarian follicle stage IV
namespace: zebrafish_anatomy
def: "Stage IV (690-730 microns) are oocyte maturation. Selman et al, 1993." [ZFIN:curator]
synonym: "mature ovarian follicle" RELATED []
xref: ZFIN:ZDB-ANAT-050711-73
is_a: ZFA:0001110 ! ovarian follicle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001265
name: ovarian follicle stage II
namespace: zebrafish_anatomy
def: "Stage II follicles (140-340 microns) are cortical alveolus stage. Selman et al, 1993." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-74
is_a: ZFA:0001110 ! ovarian follicle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001266
name: ovarian follicle stage III
namespace: zebrafish_anatomy
def: "Stage III (340-690 microns) are vitellogenesis. Selman et al, 1993." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-75
is_a: ZFA:0001110 ! ovarian follicle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001267
name: cranial vasculature
namespace: zebrafish_anatomy
synonym: "head vasculature" RELATED []
xref: ZFIN:ZDB-ANAT-050711-76
is_a: ZFA:0001079 ! vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001268
name: sperm duct
namespace: zebrafish_anatomy
synonym: "sperm ducts" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050711-77
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000598 ! testis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001269
name: regenerating fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-78
is_a: ZFA:0000108 ! fin
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001270
name: blastema
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-79
is_a: ZFA:0005147 ! regenerating tissue
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001269 ! regenerating fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001271
name: neurohypophysis
namespace: zebrafish_anatomy
synonym: "posterior pituitary" RELATED []
xref: ZFIN:ZDB-ANAT-050711-8
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000118 ! hypophysis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001272
name: palatoquadrate arch
namespace: zebrafish_anatomy
def: "The dorsal portion of the first pharyngeal arch, comprising the upper jaw." [ZFIN:curator]
synonym: "dorsal mandibular arch" RELATED []
synonym: "dorsal visceral arch 2" RELATED []
synonym: "upper jaw" RELATED []
synonym: "upper pharyngeal jaws" RELATED []
xref: ZFIN:ZDB-ANAT-050711-80
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000444 ! suspensorium
relationship: part_of ZFA:0000590 ! oral region
relationship: part_of ZFA:0001227 ! mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001273
name: ventral mandibular arch
namespace: zebrafish_anatomy
def: "The ventral portion of the first pharyngeal arch, comprising the lower jaw." [ZFIN:curator]
synonym: "lower jaw" RELATED []
synonym: "mandible" RELATED []
synonym: "mandibular series" RELATED []
xref: ZFIN:ZDB-ANAT-050711-81
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000590 ! oral region
relationship: part_of ZFA:0001227 ! mandibular arch
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001274
name: coronomeckelian
namespace: zebrafish_anatomy
def: "The coronomeckelian is a membrane bone that ossifies on Meckel's cartilage where the tendon from the adductor mandibulae A3 inserts (6.1mm). In the adult, the coronomeckelian is a small, irregularly shaped bone that is fused to the dorsomedial surface of the anguloarticular, just dorsal to Meckel's cartilage." [ZFIN:curator]
synonym: "sesamoid articular" RELATED []
xref: ZFIN:ZDB-ANAT-050711-82
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: part_of ZFA:0001273 ! ventral mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001275
name: mentomeckelian
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-83
is_obsolete: true
[Term]
id: ZFA:0001276
name: pharyngeal arch 2 skeleton
namespace: zebrafish_anatomy
synonym: "hyoid arch" RELATED []
synonym: "hyoid bars" RELATED []
synonym: "ventral visceral arch 2" RELATED []
synonym: "visceral arch 2" RELATED []
xref: ZFIN:ZDB-ANAT-050711-84
is_a: ZFA:0001216 ! splanchnocranium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001611 ! pharyngeal arch 2
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001277
name: anterior chamber swim bladder
namespace: zebrafish_anatomy
def: "The anterior compartment of the swim bladder is thought to have acoustic resonance properties that play a key role in audition. It is connected to the posterior chamber via the dusctus communicans. Finney et al, 2006." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-3
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000076 ! swim bladder
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001278
name: posterior chamber swim bladder
namespace: zebrafish_anatomy
def: "The posterior compartment of the swim bladder plays a key role in buoyancy control. It is connected to the anterior chamber via the ductus communicans. Finney et al, 2006." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-4
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000076 ! swim bladder
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001279
name: branchiostegal ray 1
namespace: zebrafish_anatomy
def: "Branchiostegal ray 1 is the most anterior ray which ossifies last (5.5 mm NL)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-87
is_a: ZFA:0000476 ! branchiostegal ray
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001280
name: branchiostegal ray 3
namespace: zebrafish_anatomy
def: "Branchiostegal ray 3 is the most posterior ray which ossifies first (3.4 mm NL)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-88
is_a: ZFA:0000476 ! branchiostegal ray
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001281
name: branchiostegal ray 2
namespace: zebrafish_anatomy
def: "Branchiostegal ray 2 is between rays 1 and 3 and ossifies second." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-89
is_a: ZFA:0000476 ! branchiostegal ray
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001282
name: adenohypophysis
namespace: zebrafish_anatomy
def: "The anterior lobe of the hypophysis (pituitary gland). This lobe contains cells that produce prolactin, growth hormone, thyroid-stimulating hormone, follicle-stimulating hormone and proopiomelanocortin. In contrast to mamalian vertebrates, the adenohypophysis remains in a subepithelial position and there exists no equivalent of Rathke's pouch in zebrafish. Herzog et al, 2004." [ZFIN:curator]
synonym: "anterior pituitary" RELATED []
xref: ZFIN:ZDB-ANAT-050711-9
relationship: develops_from ZFA:0001198 ! adenohypophyseal placode
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000118 ! hypophysis
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001283
name: pupil
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-88
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000107 ! eye
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001284
name: optic fissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-89
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0001202 ! optic cup
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001285
name: intersegmental vessel
namespace: zebrafish_anatomy
synonym: "intersegmental vessels" RELATED PLURAL []
synonym: "intersomitic vessels" RELATED []
synonym: "Se" RELATED []
synonym: "semental vessel" RELATED []
xref: ZFIN:ZDB-ANAT-050915-90
relationship: develops_from ZFA:0000014 ! dorsal aorta
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0005024 ! trunk vasculature
relationship: part_of ZFA:0005037 ! tail vasculature
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001286
name: caudal vein plexus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-91
is_a: ZFA:0005037 ! tail vasculature
relationship: end ZFS:0000039 ! Larval:Days 7-13
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001287
name: renal tubule
namespace: zebrafish_anatomy
synonym: "renal tubules" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050915-92
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000529 ! kidney
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001288
name: renal glomerulus
namespace: zebrafish_anatomy
synonym: "renal glomeruli" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050915-93
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000529 ! kidney
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001289
name: ciliary marginal zone
namespace: zebrafish_anatomy
def: "Region at the periphery of the retina where retinal stem cells are located. After 60 hpf, the CMZ is the source of most retinal growth. Wehman et al, 2005." [ZFIN:curator]
synonym: "circumferential germinal zone" RELATED []
synonym: "CMZ" RELATED []
xref: ZFIN:ZDB-ANAT-050915-94
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000152 ! retina
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001290
name: stomodeum
namespace: zebrafish_anatomy
def: "Anterior part of the embryonic alimentary canal formed as an invagination of the ectoderm; the future mouth." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050915-95
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000112 ! gut
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0001291
name: facial ganglion
namespace: zebrafish_anatomy
synonym: "geniculate ganglion" RELATED []
synonym: "gVII" RELATED []
xref: ZFIN:ZDB-ANAT-050915-96
is_a: ZFA:0001555 ! epibranchial ganglion
relationship: develops_from ZFA:0001295 ! facial placode
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001292
name: epiphyseal stalk
namespace: zebrafish_anatomy
def: "The stalk emanates from the diencephalic roof at a left-of-medial position." [ZFIN:curator]
synonym: "pineal stalk" RELATED []
xref: ZFIN:ZDB-ANAT-050915-97
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001359 ! pineal complex
relationship: start ZFS:0000043 ! Juvenile:Days 45-89
[Term]
id: ZFA:0001293
name: posterior kidney
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-98
is_a: ZFA:0000496 ! compound organ
relationship: develops_from ZFA:0000151 ! pronephros
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000529 ! kidney
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001294
name: epibranchial placode
namespace: zebrafish_anatomy
synonym: "epibranchial placodes" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050915-99
is_a: ZFA:0001309 ! neurogenic placode
relationship: develops_from ZFA:0007061 ! epibranchial field
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000142 ! peripheral nervous system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001295
name: facial placode
namespace: zebrafish_anatomy
synonym: "geniculate placode" RELATED []
xref: ZFIN:ZDB-ANAT-050915-100
is_a: ZFA:0001294 ! epibranchial placode
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001296
name: glossopharyngeal placode
namespace: zebrafish_anatomy
synonym: "petrosal placode" RELATED []
xref: ZFIN:ZDB-ANAT-050915-101
is_a: ZFA:0001294 ! epibranchial placode
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001297
name: vagal placode 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-102
is_a: ZFA:0001294 ! epibranchial placode
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001298
name: vagal placode 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-103
is_a: ZFA:0001294 ! epibranchial placode
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001299
name: vagal placode 3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-104
is_a: ZFA:0001294 ! epibranchial placode
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001300
name: vagal placode 4
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-105
is_a: ZFA:0001294 ! epibranchial placode
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001301
name: glossopharyngeal ganglion
namespace: zebrafish_anatomy
synonym: "gIX" RELATED []
synonym: "petrosal ganglion" RELATED []
xref: ZFIN:ZDB-ANAT-050915-106
is_a: ZFA:0001555 ! epibranchial ganglion
relationship: develops_from ZFA:0001296 ! glossopharyngeal placode
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001302
name: vagal ganglion 1
namespace: zebrafish_anatomy
synonym: "gX1" RELATED []
synonym: "nodose ganglion 1" RELATED []
xref: ZFIN:ZDB-ANAT-050915-107
is_a: ZFA:0001555 ! epibranchial ganglion
relationship: develops_from ZFA:0001297 ! vagal placode 1
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001303
name: vagal ganglion 2
namespace: zebrafish_anatomy
synonym: "gX2" RELATED []
synonym: "nodose ganglion 2" RELATED []
xref: ZFIN:ZDB-ANAT-050915-108
is_a: ZFA:0001555 ! epibranchial ganglion
relationship: develops_from ZFA:0001298 ! vagal placode 2
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001304
name: vagal ganglion 3
namespace: zebrafish_anatomy
synonym: "gX3" RELATED []
synonym: "nodose ganglion 3" RELATED []
xref: ZFIN:ZDB-ANAT-050915-109
is_a: ZFA:0001555 ! epibranchial ganglion
relationship: develops_from ZFA:0001299 ! vagal placode 3
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001305
name: vagal ganglion 4
namespace: zebrafish_anatomy
synonym: "gX4" RELATED []
synonym: "nodose ganglion 4" RELATED []
xref: ZFIN:ZDB-ANAT-050915-110
is_a: ZFA:0001555 ! epibranchial ganglion
relationship: develops_from ZFA:0001300 ! vagal placode 4
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001306
name: pharyngeal arch
namespace: zebrafish_anatomy
synonym: "pharyngeal arches" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050915-111
is_a: ZFA:0001488 ! multi-tissue structure
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001114 ! head
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001307
name: pharyngeal musculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-112
is_a: ZFA:0000328 ! cephalic musculature
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001306 ! pharyngeal arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001308
name: organism subdivision
namespace: zebrafish_anatomy
def: "Anatomical structure which is a primary subdivision of whole organism. The mereological sum of these is the whole organism." [ZFIN:curator]
synonym: "body part" RELATED []
xref: CARO:0000032
xref: ZFIN:ZDB-ANAT-050915-113
is_a: ZFA:0000037 ! anatomical structure
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001094 ! whole organism
relationship: start ZFS:0000017 ! Gastrula:50%-epiboly
[Term]
id: ZFA:0001309
name: neurogenic placode
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-114
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0007059 ! neurogenic field
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000016 ! ectoderm
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001310
name: dorsolateral placode
namespace: zebrafish_anatomy
synonym: "dorsolateral placodes" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050915-115
is_a: ZFA:0001309 ! neurogenic placode
relationship: develops_from ZFA:0007060 ! dorsolateral field
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001311
name: roof plate rhombomere
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-051116-1
is_a: ZFA:0007058 ! roof plate
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0001064 ! rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001312
name: dorsal anterior lateral line ganglion
namespace: zebrafish_anatomy
synonym: "anterodorsal lateral line ganglion" RELATED []
xref: ZFIN:ZDB-ANAT-050915-116
is_a: ZFA:0001391 ! anterior lateral line ganglion
relationship: develops_from ZFA:0001316 ! anterior lateral line placode
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001313
name: ventral anterior lateral line ganglion
namespace: zebrafish_anatomy
synonym: "anteroventral lateral line ganglion" RELATED []
xref: ZFIN:ZDB-ANAT-050915-117
is_a: ZFA:0001391 ! anterior lateral line ganglion
relationship: develops_from ZFA:0001316 ! anterior lateral line placode
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001314
name: posterior lateral line ganglion
namespace: zebrafish_anatomy
def: "The posterior lateral line ganglion develops from a cranial ectodermal placode and contains sensory neurons that innervate the posterior lateral line system." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050915-118
is_a: ZFA:0000120 ! lateral line ganglion
relationship: develops_from ZFA:0001156 ! posterior lateral line placode
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001315
name: atrioventricular canal
namespace: zebrafish_anatomy
synonym: "AV canal" RELATED []
xref: ZFIN:ZDB-ANAT-051116-2
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0001316
name: anterior lateral line placode
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-119
is_a: ZFA:0001310 ! dorsolateral placode
relationship: end ZFS:0000031 ! Pharyngula:Prim-25
relationship: part_of ZFA:0001468 ! anterior lateral line system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001317
name: endocardial cushion
namespace: zebrafish_anatomy
def: "Swellings of tissue present between the endocardial and myocardial cell layers that will give rise to the interstitial cells of the cardiac valves." [ZFIN:curator]
synonym: "endocardial cushions" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-051116-3
relationship: develops_from ZFA:0005072 ! endocardial ring
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0001318
name: cardiac jelly
namespace: zebrafish_anatomy
def: "The extracellular matrix between the myocardium and the endocardium. The cardiac jelly plays a central role in the septation of the heart and comprises most of the thickness of the heart wall at early stages, but disappears as the heart differentiates." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-051116-4
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000149 ! primitive heart tube
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001319
name: myocardium
namespace: zebrafish_anatomy
synonym: "cardiac muscle" RELATED []
xref: ZFIN:ZDB-ANAT-051116-5
is_a: ZFA:0005145 ! muscle
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001320
name: endocardium
namespace: zebrafish_anatomy
def: "Layer that lines the lumen of the heart." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-051116-6
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: part_of ZFA:0000360 ! heart tube
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001321
name: neurocranial trabecula
namespace: zebrafish_anatomy
synonym: "neurocranial trabeculae" RELATED PLURAL []
synonym: "trabecula" RELATED []
xref: ZFIN:ZDB-ANAT-051116-7
is_a: ZFA:0001461 ! chondrocranium cartilage
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000351 ! olfactory region
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0001322
name: dorsoventral diencephalic tract
namespace: zebrafish_anatomy
def: "A tract originating in the epiphysis and fasiculating with the tract of the postoptic commissure. Ross et al, 1992." [ZFIN:curator]
synonym: "DVDT" RELATED []
xref: ZFIN:ZDB-ANAT-060131-6
is_a: ZFA:0000338 ! diencephalic tracts and commissures
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001323
name: mid intestine
namespace: zebrafish_anatomy
def: "The terminal region of the mid intestine is comprised of specialized enterocytes that appear to play a role in mucosal immunity. Wallace et al, 2005." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060131-7
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001338 ! intestine
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001324
name: enteric musculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-8
is_a: ZFA:0000548 ! musculature system
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000112 ! gut
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001325
name: neural prezygapophysis
namespace: zebrafish_anatomy
def: "Paired, anteromedially directed processes from the neural arches, ligamentously joined to the postzygapophyses of the preceding vertebra." [ZFIN:curator]
synonym: "neural prezygapophyses" RELATED PLURAL []
synonym: "neural prezygopophyses" RELATED []
xref: ZFIN:ZDB-ANAT-060331-7
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001066 ! neural arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001326
name: lens epithelium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-9
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000035 ! lens
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001327
name: abdominal musculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-10
is_a: ZFA:0000473 ! trunk musculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001328
name: neuromere
namespace: zebrafish_anatomy
def: "A metameric segment of the central nervous system." [ZFIN:curator]
synonym: "neural segment" RELATED []
synonym: "neuromeres" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060131-11
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000012 ! central nervous system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001329
name: retinal inner plexiform layer
namespace: zebrafish_anatomy
def: "The layer within the retina where the bipolar cells synapse with the dendrites of the ganglion cells." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-051116-8
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000046 ! retinal neural layer
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001330
name: retinal outer plexiform layer
namespace: zebrafish_anatomy
def: "The layer within the retina where the bipolar cells synapse with the photoreceptor cells." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-051116-9
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000046 ! retinal neural layer
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001331
name: outer limiting membrane
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-051116-10
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000046 ! retinal neural layer
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001332
name: spinal neuromere
namespace: zebrafish_anatomy
synonym: "spinal cord segment" RELATED []
synonym: "spinal neuromeres" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060131-12
is_a: ZFA:0001328 ! neuromere
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001333
name: visceral organ
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-13
is_obsolete: true
[Term]
id: ZFA:0001334
name: presumptive enteric nervous system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-14
is_a: ZFA:0001116 ! presumptive structure
relationship: develops_from ZFA:0000818 ! vagal neural crest
relationship: end ZFS:0000032 ! Pharyngula:High-pec
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001335
name: supradorsal
namespace: zebrafish_anatomy
def: "Supradorsals are small paired nodules of cartilage positioned at the distal ends of neural arches and the proximal end of neural spines (Arratia et al., 2001)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-8
is_a: ZFA:0001457 ! postcranial axial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001066 ! neural arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001336
name: neural spine
namespace: zebrafish_anatomy
def: "Neural spines are extensions of neural arches dorsal to the neural canal in the median skeletogenous septum. Neural spines are typically unpaired median structures but can be paired in some instances, e.g., in the abdominal region of basal teleosts such as Leptolepis, Elops, Megalops, and Hiodon)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-9
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001066 ! neural arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001337
name: spermatogonia
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-15
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000598 ! testis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001338
name: intestine
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-16
is_a: ZFA:0001490 ! cavitated compound organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000112 ! gut
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001339
name: nucleus of the tract of the anterior commissure
namespace: zebrafish_anatomy
def: "Telencephalic nucleus containing the cell bodies of neurons whose axons form the anterior commissure." [ZFIN:curator]
synonym: "ntAC" RELATED []
xref: ZFIN:ZDB-ANAT-060131-17
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001108 ! anterior commissure
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001340
name: nucleus of the tract of the postoptic commissure
namespace: zebrafish_anatomy
def: "The nucleus containing the cell bodies of neurons whose axons form the postoptic commissure." [ZFIN:curator]
synonym: "ntPOC" RELATED []
xref: ZFIN:ZDB-ANAT-060131-18
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001341
name: intervening zone
namespace: zebrafish_anatomy
def: "A zone of delayed differentiation at the midbrainhindbrain boundary. The IZ separates midbrain from anterior hindbrain neuronal clusters and has been described in all vertebrates. Geling et al, 2003." [ZFIN:curator]
synonym: "IZ" RELATED []
xref: ZFIN:ZDB-ANAT-060131-19
relationship: develops_from ZFA:0001342 ! presumptive intervening zone
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000042 ! midbrain hindbrain boundary
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001342
name: presumptive intervening zone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-20
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0007023 ! posterior neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001343
name: telencephalon diencephalon boundary
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-21
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000109 ! forebrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001344
name: zona limitans intrathalamica
namespace: zebrafish_anatomy
def: "The border between the dorsal and ventral thalamus." [ZFIN:curator]
synonym: "zli" RELATED []
xref: ZFIN:ZDB-ANAT-060131-22
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001215 ! thalamus
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001345
name: interrenal gland
namespace: zebrafish_anatomy
def: "An epithelial structure consisting of steroid producing cells interposed with chromaffin cells embedded within the head kidney. The interrenal gland is thought to be the equivalent of the mammalian adrenal cortex in zebrafish. Hsu et al. 2003." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060131-23
relationship: develops_from ZFA:0001346 ! interrenal primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000669 ! head kidney
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001346
name: interrenal primordium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-24
relationship: develops_from ZFA:0001206 ! intermediate mesoderm
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0000529 ! kidney
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001347
name: stratum fibrosum et griseum superficiale
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-25
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001348
name: stratum marginale
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-26
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001349
name: stratum opticum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-27
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001350
name: stratum griseum centrale
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-28
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001351
name: stratum album centrale
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-29
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001352
name: stratum periventriculare
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-30
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001353
name: mesencephalic tectum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-31
relationship: develops_from ZFA:0001357 ! alar plate midbrain
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001354
name: mesencephalic tegmentum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-32
relationship: develops_from ZFA:0000761 ! basal plate midbrain
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001355
name: primitive meninx
namespace: zebrafish_anatomy
synonym: "meninges" RELATED []
synonym: "meninx primitiva" RELATED []
xref: ZFIN:ZDB-ANAT-060131-33
relationship: develops_from ZFA:0000045 ! neural crest
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000396 ! nervous system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001356
name: terminal nerve
namespace: zebrafish_anatomy
def: "The terminal nerve, located anterior to cranial nerve I, is comprised of a group of cells with somata adjacent to the olfactory bulb and processes that extend anteriorly to the olfactory epithelium and posteriorly to the telencephalon. In teleost fish an additional group of axons extends along the optic tract and delivers putative neuromodulators to the retina. It is thought to develop from cranial neural crest. Whitlock 2004. Also see Grens, Greenwood and Fernald, Brain Behav Evol 2005; 66(1):1-9." [ZFIN:curator]
synonym: "nervus terminalis" RELATED []
xref: ZFIN:ZDB-ANAT-060131-34
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001357
name: alar plate midbrain
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-35
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000128 ! midbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001358
name: roof plate diencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-36
is_a: ZFA:0007058 ! roof plate
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001359
name: pineal complex
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-37
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000509 ! epithalamus
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001360
name: parapineal organ
namespace: zebrafish_anatomy
def: "An unpaired left-sided accessory organ which plays a role in establishing lateral brain left right asymmetry. Gamse et al, 2003." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060131-38
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001359 ! pineal complex
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001361
name: basiventral
namespace: zebrafish_anatomy
def: "Basiventrals are bilaterally paired cartilages lateral to the notochord which are replaced by ossified parapophyses or hemal arches." [ZFIN:curator]
synonym: "arcualia" RELATED []
xref: ZFIN:ZDB-ANAT-060331-10
is_a: ZFA:0001457 ! postcranial axial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001362
name: parapophysis
namespace: zebrafish_anatomy
def: "Parapophyses are lateral or ventrolateral projections of vertebrae to which ribs are attached in Danio rerio. Parapophyses can arise through replacement ossification of a basiventral or form directly in bone. They are separated from the centrum in basal teleosts, e.g., Leptolepis coryphaenoides, Megalops and Elops." [ZFIN:curator]
synonym: "lateral process of basiventral" RELATED []
synonym: "transverse process" RELATED []
xref: ZFIN:ZDB-ANAT-060331-11
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001361 ! basiventral
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001582 ! non-Weberian precaudal vertebra
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001363
name: neural complex
namespace: zebrafish_anatomy
alt_id: ZFA:0001398
def: "The neural complex is the collective term for the ossified supraneurals (Sn 2 and Sn 3) and their membrane bone extensions above the first four vertebrae. (Hoffmann and Britz, 2006), Bird and Mabee, 2003." [ZFIN:curator]
synonym: "Weberian supraneural" RELATED []
xref: ZFIN:ZDB-ANAT-060331-12
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001188 ! Weberian apparatus
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001364
name: hemal spine
namespace: zebrafish_anatomy
def: "Hemal spines are extensions of hemal arches in the ventral skeletogenous septum of the caudal region." [ZFIN:curator]
synonym: "haemal spine" RELATED []
xref: ZFIN:ZDB-ANAT-060331-13
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000519 ! hemal arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001365
name: trigeminal motor nuclei
namespace: zebrafish_anatomy
synonym: "motor nucleus V" RELATED []
synonym: "nV" RELATED []
xref: ZFIN:ZDB-ANAT-060131-39
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001366
name: tract of the postoptic commissure
namespace: zebrafish_anatomy
synonym: "TPOC" RELATED []
xref: ZFIN:ZDB-ANAT-060131-40
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000059 ! postoptic commissure
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001367
name: forebrain midbrain boundary
namespace: zebrafish_anatomy
def: "The boundary between the diencephalon and the mesencephalon." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060131-41
relationship: develops_from ZFA:0007040 ! forebrain midbrain boundary neural tube
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000008 ! brain
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001368
name: presumptive forebrain midbrain boundary
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-42
relationship: end ZFS:0000020 ! Gastrula:75%-epiboly
relationship: part_of ZFA:0000146 ! presumptive brain
relationship: part_of ZFA:0007014 ! anterior presumptive neural plate
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001369
name: anterior pancreatic bud
namespace: zebrafish_anatomy
synonym: "ventral pancreatic anlage" RELATED []
xref: ZFIN:ZDB-ANAT-060131-43
is_a: ZFA:0001390 ! pancreatic bud
relationship: end ZFS:0000033 ! Hatching:Long-pec
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0001370
name: posterior pancreatic bud
namespace: zebrafish_anatomy
synonym: "dorsal pancreatic anlage" RELATED []
xref: ZFIN:ZDB-ANAT-060131-44
is_a: ZFA:0001390 ! pancreatic bud
relationship: end ZFS:0000033 ! Hatching:Long-pec
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001371
name: pancreatic system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-45
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000339 ! digestive system
relationship: part_of ZFA:0001158 ! endocrine system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001372
name: pancreatic duct
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-46
relationship: develops_from ZFA:0001369 ! anterior pancreatic bud
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001371 ! pancreatic system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001373
name: migratory slow muscle precursor cell
namespace: zebrafish_anatomy
def: "Cells that initially are located adjacent to the spinal cord and notochord along that migrate from their initial medial position radially through the myotome to the lateral surface of the somites." [ZFIN:curator]
synonym: "migratory slow muscle precursor cells" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060131-47
relationship: develops_from ZFA:0000003 ! adaxial cell
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000155 ! somite
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001374
name: atrial myocardium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-48
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000471 ! atrium
relationship: part_of ZFA:0001319 ! myocardium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001375
name: ventriculo bulbo valve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-49
is_a: ZFA:0005065 ! heart valve
relationship: develops_from ZFA:0001317 ! endocardial cushion
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000009 ! cardiac ventricle
relationship: part_of ZFA:0000173 ! bulbus arteriosus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001376
name: presumptive ectoderm
namespace: zebrafish_anatomy
alt_id: ZFA:0000147
synonym: "presumptive epidermis" RELATED []
xref: ZFIN:ZDB-ANAT-060131-50
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000019 ! Gastrula:Shield
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0001377
name: presumptive mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-51
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000021 ! Gastrula:90%-epiboly
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0001378
name: axial hypoblast
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-52
relationship: develops_from ZFA:0000071 ! shield
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0000117 ! hypoblast
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001379
name: pharyngeal ectoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-53
relationship: end ZFS:0000027 ! Segmentation:20-25 somites
relationship: part_of ZFA:0000056 ! pharynx
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001381
name: hypohyal
namespace: zebrafish_anatomy
def: "Hypohyals are the most anterior of the bilaterally paired ventral hyoid arch elements. The two hypohyals in zebrafish ossify at the anterodorsal and anteroventral tips of the ceratohyal cartilages; no separate hypohyal cartilages are present." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-15
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001400 ! ceratohyal cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001402 ! ventral hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001382
name: epibranchial uncinate process
namespace: zebrafish_anatomy
def: "Epibranchials 1-3 in adults are compound elements formed by the fusion of epibranchial cartilages and the so-called uncinate processes. Posteromedially directed uncinate processes develop on the posterior edge of epibranchials 1-3. These appear as separate centers of chondrification (6.2 mm) that later fuse laterally to the posterior edges of the epibranchial cartilages (6.8 mm)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-16
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000658 ! epibranchial bone
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001383
name: fin bud
namespace: zebrafish_anatomy
synonym: "fin buds" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060131-54
is_a: ZFA:0000292 ! surface structure
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001384
name: pelvic fin bud
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-55
is_a: ZFA:0001383 ! fin bud
relationship: develops_from ZFA:0001454 ! pelvic fin field
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001385
name: apical ectodermal ridge pelvic fin bud
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-56
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001384 ! pelvic fin bud
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001386
name: mesoderm pelvic fin bud
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-57
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001384 ! pelvic fin bud
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001387
name: pelvic fin skeleton
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-58
is_a: ZFA:0000027 ! paired fin skeleton
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001184 ! pelvic fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001388
name: epithelial mesenchymal boundary
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-59
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001269 ! regenerating fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001389
name: regeneration epithelium
namespace: zebrafish_anatomy
synonym: "epidermal cap" RELATED []
synonym: "wound epidermis" RELATED []
synonym: "wound epithelium" RELATED []
xref: ZFIN:ZDB-ANAT-060131-60
is_a: ZFA:0001486 ! epithelium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001269 ! regenerating fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001390
name: pancreatic bud
namespace: zebrafish_anatomy
synonym: "pancreatic buds" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060131-61
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0000254 ! pancreas primordium
relationship: end ZFS:0000033 ! Hatching:Long-pec
relationship: part_of ZFA:0001371 ! pancreatic system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001391
name: anterior lateral line ganglion
namespace: zebrafish_anatomy
def: "The anteror lateral line ganglia develops from cranial ectodermal placodes and contain sensory neurons that innervate the anterior lateral line system." [ZFIN:curator]
synonym: "anterior lateral line ganglia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060131-62
is_a: ZFA:0000120 ! lateral line ganglion
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001392
name: parapophysis 1
namespace: zebrafish_anatomy
def: "Lateral projections from the first centrum in cyprinids, absent in catostomids, and absent in characiphysans (Fink and Fink, 1996)." [ZFIN:curator]
synonym: "basipophysis 1" RELATED []
synonym: "lateral process 1" RELATED []
xref: ZFIN:ZDB-ANAT-060331-17
is_a: ZFA:0001362 ! parapophysis
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001167 ! vertebra 1
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001393
name: parapophysis 2
namespace: zebrafish_anatomy
def: "Lateral projection from the second centrum, absent in Siluriformes (Fink and Fink, 1996)." [ZFIN:curator]
synonym: "basipophysis" RELATED []
synonym: "lateral process 2" RELATED []
xref: ZFIN:ZDB-ANAT-060331-18
is_a: ZFA:0001362 ! parapophysis
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001168 ! vertebra 2
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001394
name: neural arch 3
namespace: zebrafish_anatomy
def: "Neural arch 3 is expanded and fused to supraneural 3 as part of a neural complex roofing and protecting the neural canal." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-19
is_a: ZFA:0001066 ! neural arch
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001169 ! vertebra 3
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001395
name: neural arch 4
namespace: zebrafish_anatomy
def: "Neural arch 4 is expanded and fused to supraneural 3 as part of the neural complex. A reduced neural spine projects from the posterior margin of the neural complex." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-20
is_a: ZFA:0001066 ! neural arch
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001170 ! vertebra 4
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001396
name: parapophysis/rib
namespace: zebrafish_anatomy
def: "The parapophysis + rib, fused to the centrum, extends laterally then angles anteroventrally. A thin plate, the os suspensorium fuses to its median surface." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-21
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001170 ! vertebra 4
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001397
name: post-Weberian supraneural
namespace: zebrafish_anatomy
def: "Posterior to the Weberian apparatus, otophysan supraneurals form as median, unpaired, rod- or platelike elements, as in other actinopterygians." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-22
is_a: ZFA:0000442 ! supraneural
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001399
name: palatoquadrate cartilage
namespace: zebrafish_anatomy
synonym: "pterygoquadrate" RELATED []
synonym: "quadrate cartilage" RELATED []
xref: ZFIN:ZDB-ANAT-060331-24
is_a: ZFA:0001460 ! pharyngeal arch cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001272 ! palatoquadrate arch
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001400
name: ceratohyal cartilage
namespace: zebrafish_anatomy
def: "Bilaterally paired dumbbell-shaped cartilage with an expanded posterior tip and slightly narrower anterior tip." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-25
is_a: ZFA:0001460 ! pharyngeal arch cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001402 ! ventral hyoid arch
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001401
name: dorsal hyoid arch
namespace: zebrafish_anatomy
synonym: "dorsal visceral arch 2" RELATED []
xref: ZFIN:ZDB-ANAT-060331-26
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000444 ! suspensorium
relationship: part_of ZFA:0001276 ! pharyngeal arch 2 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001402
name: ventral hyoid arch
namespace: zebrafish_anatomy
synonym: "ventral visceral arch 2" RELATED []
xref: ZFIN:ZDB-ANAT-060331-27
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001276 ! pharyngeal arch 2 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001403
name: supraethmoid
namespace: zebrafish_anatomy
def: "Dermal bone that first appears as paired ossifications in the membrane (dermis) dorsolateral to the ethmoid cartilage and anterolateral to the lateral ethmoids, later having the appearance of one butterfly-shaped element. Fused to the anterodorsal margain of the mesethmoid. Bordered anteriorly by the kinethmoid and posteriorly by the frontal." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-28
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000351 ! olfactory region
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0001404
name: preethmoid bone
namespace: zebrafish_anatomy
def: "Small rounded to egg-shaped cartilage bone that sits in an anterolateral depression on the prevomer. Articulates with the autopalatine in all cypriniforms." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-29
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001405 ! ethmoid cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000351 ! olfactory region
relationship: start ZFS:0000043 ! Juvenile:Days 45-89
[Term]
id: ZFA:0001405
name: ethmoid cartilage
namespace: zebrafish_anatomy
def: "Bilaterally paired neurocranium cartilage which is initially plate-like and formed from the anterior fusion between the bilaterally paired trabecula crani. It grows dorsally between the laminae orbitonasales to attain a complex shape." [ZFIN:curator]
synonym: "ethmoid plate" RELATED []
xref: ZFIN:ZDB-ANAT-060331-30
is_a: ZFA:0001461 ! chondrocranium cartilage
relationship: end ZFS:0000042 ! Juvenile:Days 30-44
relationship: part_of ZFA:0000351 ! olfactory region
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001406
name: kinethmoid bone
namespace: zebrafish_anatomy
def: "Small median unpaired dermal sesamoid bone in the premaxillary-ethmoid ligament between the mesethmoid and the premaxilla that enhances the protract ability of the upper jaw. It forms in the premaxillary-ethmoid ligament. The kinethmoid arose de novo in the ancestor of Cypriniformes, the only group within Ostariophysi, in which it is found (Fink and Fink, 1981)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-31
is_a: ZFA:0001590 ! dermal bone
relationship: develops_from ZFA:0000585 ! kinethmoid cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000351 ! olfactory region
relationship: part_of ZFA:0000863 ! dermal bone cranium
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0001407
name: infraorbital 2
namespace: zebrafish_anatomy
def: "Plate like dermal bone, variable in size, though usually one of the smallest in the series. Bears 2-3 neuromast pores enclosed within the infraorbital canal (Nelson, 1969)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-32
is_a: ZFA:0000376 ! infraorbital
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001408
name: infraorbital 3
namespace: zebrafish_anatomy
def: "Plate like dermal bone, variable in size, but usually largest in the series. Usually fused with IO4 (eg. Opsariichthys, Nelson (1969)). Usually bears 3 neuromast pores enclosed within the infraorbital canal (Nelson, 1969)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-33
is_a: ZFA:0000376 ! infraorbital
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001409
name: infraorbital 4
namespace: zebrafish_anatomy
def: "Plate like dermal bone. Usually fused with infraorbital 3." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-34
is_a: ZFA:0000376 ! infraorbital
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001410
name: orbital region
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060331-35
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001424 ! chondrocranium
relationship: part_of ZFA:0001580 ! neurocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001411
name: sclerotic bone
namespace: zebrafish_anatomy
def: "A pair of small dish-shaped bones that cap the anterior and posterior margin of the eyeball." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-36
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001509 ! sclerotic cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001410 ! orbital region
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001412
name: epiotic
namespace: zebrafish_anatomy
alt_id: ZFA:0000659
def: "Cartilage bone that contacts the pterotic anteriorly, the supraoccipital and parietal dorsally, and the exoccipital ventrally. The epiotic enclose the posterior semicircular canal of the inner ear and contribute to the hind margin of the cranium." [ZFIN:curator]
synonym: "epioccipital" RELATED []
xref: ZFIN:ZDB-ANAT-060331-37
is_a: ZFA:0001591 ! endochondral bone
relationship: develops_from ZFA:0001500 ! auditory capsule
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000189 ! otic region
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0001414
name: occipital region
namespace: zebrafish_anatomy
synonym: "basicranial region" RELATED []
xref: ZFIN:ZDB-ANAT-060331-39
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001424 ! chondrocranium
relationship: part_of ZFA:0001580 ! neurocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001415
name: pelvic radial 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060331-40
is_a: ZFA:0000508 ! pelvic radial
relationship: develops_from ZFA:0001541 ! pelvic radial 2 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001416
name: pelvic radial 3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060331-41
is_a: ZFA:0000508 ! pelvic radial
relationship: develops_from ZFA:0001540 ! pelvic radial 3 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001417
name: pelvic radial 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060331-42
is_a: ZFA:0000508 ! pelvic radial
relationship: develops_from ZFA:0001542 ! pelvic radial 1 cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001418
name: dorsal fin lepidotrichium
namespace: zebrafish_anatomy
def: "Lepidotrichium which is part of the dorsal fin." [ZFIN:curator]
synonym: "dorsal fin lepidotrichia" RELATED PLURAL []
synonym: "dorsal fin ray" RELATED []
xref: ZFIN:ZDB-ANAT-060331-43
is_a: ZFA:0001554 ! lepidotrichium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001124 ! dorsal fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001419
name: dorsal fin pterygiophore
namespace: zebrafish_anatomy
def: "A range of seven to nine rod-like internal median skeletal support structures of the dorsal fin, comprised of both bone and cartilage and found between vertebrae 11 and 18." [ZFIN:curator]
synonym: "dorsal fin support" RELATED []
xref: ZFIN:ZDB-ANAT-060331-44
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001124 ! dorsal fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001420
name: anal fin pterygiophore
namespace: zebrafish_anatomy
def: "A range of twelve to fourteen rod-like internal median skeletal support structures of the anal fin, comprised of both bone and cartilage and found between vertebrae 14 and 21." [ZFIN:curator]
synonym: "anal fin radial" RELATED []
xref: ZFIN:ZDB-ANAT-060331-45
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000167 ! anal fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001421
name: anal fin lepidotrichium
namespace: zebrafish_anatomy
def: "Lepidotrichium which is part of the anal fin." [ZFIN:curator]
synonym: "anal fin lepidotrichia" RELATED PLURAL []
synonym: "anal fin ray" RELATED []
xref: ZFIN:ZDB-ANAT-060331-46
is_a: ZFA:0001554 ! lepidotrichium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000167 ! anal fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001422
name: hyosymplectic cartilage
namespace: zebrafish_anatomy
def: "Bilaterally paired large cartilage that articulates with the chondrocranium dorsally, the opercle posteriorly, and the palatoquadrate cartilage anteriorly." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-47
is_a: ZFA:0001460 ! pharyngeal arch cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001401 ! dorsal hyoid arch
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001423
name: parachordal cartilage
namespace: zebrafish_anatomy
def: "Rod-shaped paired cartilages on either side of the notochord. They unite, forming the base of the chondrocranium and are replaced by the prootic bones." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-48
is_a: ZFA:0001461 ! chondrocranium cartilage
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000189 ! otic region
relationship: part_of ZFA:0001414 ! occipital region
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001424
name: chondrocranium
namespace: zebrafish_anatomy
alt_id: ZFA:0000377
def: "Cranial skeletal elements composed of cartilage and cartilage replacement bones." [ZFIN:curator]
synonym: "chondocranium" RELATED []
synonym: "neurocranium" RELATED []
xref: ZFIN:ZDB-ANAT-060331-49
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000737 ! cranium
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0001425
name: basal plate cartilage
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060331-50
is_a: ZFA:0001461 ! chondrocranium cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001423 ! parachordal cartilage
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001426
name: posterior naris
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060331-51
is_a: ZFA:0000550 ! naris
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001427
name: anterior naris
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060331-52
is_a: ZFA:0000550 ! naris
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001428
name: olfactory rosette
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060331-53
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000047 ! peripheral olfactory organ
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001429
name: raphe nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060331-54
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000241 ! midline column
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001430
name: pneumatic duct
namespace: zebrafish_anatomy
def: "A duct connecting the esophagus to the posterior chamber of the swim bladder. Finney et al, 2006." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-5
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000204 ! esophagus
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001431
name: primitive olfactory epithelium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060331-55
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000048 ! olfactory placode
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001432
name: anterior sclerotic bone
namespace: zebrafish_anatomy
def: "Sclerotic bone that is located anterior to the eye." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-56
is_a: ZFA:0001411 ! sclerotic bone
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001433
name: posterior sclerotic bone
namespace: zebrafish_anatomy
def: "Sclerotic bone that is located posterior to the eye." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-57
is_a: ZFA:0001411 ! sclerotic bone
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001434
name: floor plate neural tube
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060331-58
is_a: ZFA:0000022 ! floor plate
relationship: develops_from ZFA:0000887 ! floor plate neural rod
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001135 ! neural tube
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001435
name: lateral wall neural tube
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060331-59
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001135 ! neural tube
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001436
name: roof plate neural tube
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060331-60
is_a: ZFA:0007058 ! roof plate
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001135 ! neural tube
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001437
name: ductus communicans
namespace: zebrafish_anatomy
def: "The constriction between the anterior and posterior chambers of the swim bladder. There does not appear to be an identifiable sphincter in the ductus, and therefore other musculature may regulate its opening. Finney et al, 2006." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-6
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000076 ! swim bladder
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001438
name: coelom
namespace: zebrafish_anatomy
synonym: "body cavity" RELATED []
xref: ZFIN:ZDB-ANAT-060816-7
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001115 ! trunk
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001439
name: anatomical system
namespace: zebrafish_anatomy
def: "Anatomical group that has as its parts distinct anatomical structures interconnected by anatomical structures at a lower level of granularity." [ZFIN:curator]
xref: CARO:0000011
xref: ZFIN:ZDB-ANAT-060816-8
is_a: ZFA:0001512 ! anatomical group
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001094 ! whole organism
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001440
name: rhombic lip
namespace: zebrafish_anatomy
def: "The interface between the dorsal neuroepithelium and the roofplate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain." [ZFIN:curator]
synonym: "presumptive cerebellum" RELATED []
xref: ZFIN:ZDB-ANAT-060816-9
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0000029 ! hindbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001441
name: lower rhombic lip
namespace: zebrafish_anatomy
def: "Posterior portion of the rhombic lip contained within rhombomeres 2-8. Gives rise to several brainstem nuclei and choroid plexus." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-10
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0000069 ! rhombomere 6
relationship: part_of ZFA:0000153 ! rhombomere 8
relationship: part_of ZFA:0000822 ! rhombomere 2
relationship: part_of ZFA:0000823 ! rhombomere 5
relationship: part_of ZFA:0000948 ! rhombomere 3
relationship: part_of ZFA:0000949 ! rhombomere 7
relationship: part_of ZFA:0001032 ! rhombomere 4
relationship: part_of ZFA:0001440 ! rhombic lip
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001442
name: upper rhombic lip
namespace: zebrafish_anatomy
def: "Anterior-most region of dorsal hindbrain within rhombomere 1, adjacent the midbrain-hindbrain boundary." [ZFIN:curator]
synonym: "cerebellar anlage" RELATED []
synonym: "presumptive cerebellum" RELATED []
xref: ZFIN:ZDB-ANAT-060816-11
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0001031 ! rhombomere 1
relationship: part_of ZFA:0001440 ! rhombic lip
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001443
name: choroid plexus
namespace: zebrafish_anatomy
def: "A tuft of capillaries that project into the ventricles of the brain and secretes cerebral spinal fluid. The choroid plexus is covered by a cuboidal epithelium which maintains the integrity of the blood-brain barrier." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-12
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000008 ! brain
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001444
name: choroid plexus third ventricle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-13
is_a: ZFA:0001443 ! choroid plexus
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000161 ! third ventricle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001445
name: choroid plexus tectal ventricle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-14
is_a: ZFA:0001443 ! choroid plexus
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000159 ! tectal ventricle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001446
name: choroid plexus fourth ventricle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-15
is_a: ZFA:0001443 ! choroid plexus
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000110 ! fourth ventricle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001447
name: choroid plexus telencephalic ventricle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-16
is_a: ZFA:0001443 ! choroid plexus
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000696 ! telencephalic ventricle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001448
name: ultimobranchial body
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-17
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001158 ! endocrine system
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0001449
name: mesenchyme pelvic fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-18
is_a: ZFA:0000393 ! mesenchyme
relationship: develops_from ZFA:0001386 ! mesoderm pelvic fin bud
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0001184 ! pelvic fin
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001450
name: apical ectodermal ridge pelvic fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-19
relationship: develops_from ZFA:0001385 ! apical ectodermal ridge pelvic fin bud
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0001184 ! pelvic fin
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0001451
name: zone of polarizing activity pectoral fin bud
namespace: zebrafish_anatomy
def: "A small group of mesodermal cells located at the posterior margin of the developing fin bud. the ZPA is thought to produce retinoic acid and thereby provides positional information to the developing bud. Gibert et al., 2006." [ZFIN:curator]
synonym: "ZPA" RELATED []
xref: ZFIN:ZDB-ANAT-060816-20
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: part_of ZFA:0000789 ! mesoderm pectoral fin bud
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001452
name: zone of polarizing activity pelvic fin bud
namespace: zebrafish_anatomy
def: "A small group of mesodermal cells located at the posterior margin of the developing fin bud. the ZPA is thought to produce retinoic acid and thereby provides positional information to the developing bud. Gibert et al., 2006." [ZFIN:curator]
synonym: "ZPA" RELATED []
xref: ZFIN:ZDB-ANAT-060816-21
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: part_of ZFA:0001386 ! mesoderm pelvic fin bud
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001453
name: pectoral fin field
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-22
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0005042 ! posterior lateral plate mesoderm
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001454
name: pelvic fin field
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-23
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0005042 ! posterior lateral plate mesoderm
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001455
name: scapulocorocoid
namespace: zebrafish_anatomy
def: "The cartilage from which both the scapula and coracoid develop." [ZFIN:curator]
synonym: "coraco-scapular cartilage" RELATED []
xref: ZFIN:ZDB-ANAT-060816-24
is_a: ZFA:0000257 ! pectoral fin cartilage
relationship: end ZFS:0000041 ! Larval:Days 21-29
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001456
name: pectoral fin endoskeletal disc
namespace: zebrafish_anatomy
def: "A plate-like chondrogenic condensation within the pectoral fin, which subdivides into individual radials by decomposition of extracellular matrix in the inter-radial mesenchyme (Grandel and Schulte-Merker, 1998)." [ZFIN:curator]
synonym: "fin plate cartilage" RELATED []
xref: ZFIN:ZDB-ANAT-060816-25
is_a: ZFA:0000257 ! pectoral fin cartilage
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0001457
name: postcranial axial cartilage
namespace: zebrafish_anatomy
def: "Cartilage which is part of the axial skeleton." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-26
is_a: ZFA:0001501 ! cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000317 ! postcranial axial skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001458
name: cranial cartilage
namespace: zebrafish_anatomy
def: "Cartilage which is part of the cranium." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-27
is_a: ZFA:0001501 ! cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000737 ! cranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001459
name: pelvic fin cartilage
namespace: zebrafish_anatomy
def: "Cartilage which is part of the pelvic fin." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-28
is_a: ZFA:0001543 ! paired fin cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001387 ! pelvic fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001460
name: pharyngeal arch cartilage
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-29
is_a: ZFA:0001458 ! cranial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001216 ! splanchnocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001461
name: chondrocranium cartilage
namespace: zebrafish_anatomy
synonym: "neurocranium cartilage" RELATED []
xref: ZFIN:ZDB-ANAT-060816-30
is_a: ZFA:0001458 ! cranial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001424 ! chondrocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001462
name: somite border
namespace: zebrafish_anatomy
synonym: "somite border cell" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060816-31
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000155 ! somite
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001463
name: melanophore stripe
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-32
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000368 ! integument
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001464
name: retinal outer nuclear layer
namespace: zebrafish_anatomy
def: "The layer within the retina where the photoreceptor cell bodies reside." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061101-8
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000046 ! retinal neural layer
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001465
name: photoreceptor inner segment layer
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-9
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000143 ! retinal photoreceptor layer
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001466
name: photoreceptor outer segment layer
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-10
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000143 ! retinal photoreceptor layer
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001467
name: pharyngeal mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-11
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: part_of ZFA:0000056 ! pharynx
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001468
name: anterior lateral line system
namespace: zebrafish_anatomy
def: "The anterior lateral line system develops from cranial ectodermal placodes, situated between the eye and the ear, that give rise to both the neuromasts and the anterior lateral line sensory nerves that innervate the neuromasts. The anterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians and are innervated by several lateral line nerves, which project to the hindbrain. The anterior lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061101-12
is_a: ZFA:0000034 ! lateral line system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001469
name: lateral line
namespace: zebrafish_anatomy
def: "The lateral line consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head and body of all fishes and most amphibians. The lateral line develops from cranial ectodermal placodes situated behind the ear and between the eye and ear." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061101-13
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000034 ! lateral line system
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001470
name: anterior lateral line
namespace: zebrafish_anatomy
def: "The anterior lateral line consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The anterior lateral line develops from cranial ectodermal placodes situated between the eye and ear." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061101-14
is_a: ZFA:0001469 ! lateral line
relationship: develops_from ZFA:0005117 ! anterior lateral line primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001468 ! anterior lateral line system
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001471
name: posterior lateral line system
namespace: zebrafish_anatomy
def: "The posterior lateral line system develops from cranial ectodermal placodes, situated behind the ear, that give rise to both the neuromasts and the posterior lateral line sensory nerves that innervate the neuromasts. The posterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The neuromasts are innervated by several lateral line nerves, which project primarily to the hindbrain. The posterior mechanosensory lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061101-15
is_a: ZFA:0000034 ! lateral line system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001472
name: anterior lateral line neuromast
namespace: zebrafish_anatomy
def: "Neuromast that is part of the anterior lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromast anterior" RELATED []
xref: ZFIN:ZDB-ANAT-061101-16
is_a: ZFA:0000243 ! neuromast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001470 ! anterior lateral line
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0001473
name: deep blastomere
namespace: zebrafish_anatomy
def: "Cells (completely cleaved), located underneath the superficial blastomeres and internal to the marginal blastomeres. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061101-17
is_a: ZFA:0000093 ! blastomere
relationship: end ZFS:0000015 ! Blastula:Dome
relationship: start ZFS:0000007 ! Cleavage:64-cell
[Term]
id: ZFA:0001474
name: presumptive cardinal organ
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-18
is_obsolete: true
[Term]
id: ZFA:0001475
name: presumptive organ
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-19
is_obsolete: true
[Term]
id: ZFA:0001476
name: presumptive organ system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-20
is_obsolete: true
[Term]
id: ZFA:0001477
name: portion of tissue
namespace: zebrafish_anatomy
def: "Anatomical structure, that consists of similar cells and intercellular matrix, aggregated according to genetically determined spatial relationships." [ZFIN:curator]
xref: CARO:0000043
xref: ZFIN:ZDB-ANAT-061101-21
is_a: ZFA:0000037 ! anatomical structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000019 ! Gastrula:Shield
[Term]
id: ZFA:0001478
name: anatomical cluster
namespace: zebrafish_anatomy
def: "Anatomical group that has its parts adjacent to one another." [ZFIN:curator]
xref: CARO:0000041
xref: ZFIN:ZDB-ANAT-061101-22
is_a: ZFA:0001512 ! anatomical group
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000012 ! Blastula:High
[Term]
id: ZFA:0001479
name: lateral line nerve
namespace: zebrafish_anatomy
def: "Cranial nerves that carry afferent and efferent fibers for the lateral line system." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061101-23
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000034 ! lateral line system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001480
name: dorsal anterior lateral line nerve
namespace: zebrafish_anatomy
def: "Nerve fibers originating from the dorsal anterior lateral line ganglion. These rami innervate the otic, supraorbital, and infraorbital neuromasts." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061101-24
is_a: ZFA:0001479 ! lateral line nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000425 ! anterior lateral line nerve
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001481
name: ventral anterior lateral line nerve
namespace: zebrafish_anatomy
def: "Nerve fibers originating from the ventral anterior lateral line ganglion. These rami innervate the mandibular and opercular neuromasts." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061101-25
is_a: ZFA:0001479 ! lateral line nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000425 ! anterior lateral line nerve
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001482
name: middle lateral line nerve
namespace: zebrafish_anatomy
def: "Nerve fibers originating from the middle lateral line ganglion. These fibers innervate the middle lateral line." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061101-26
is_a: ZFA:0001479 ! lateral line nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000175 ! posterior lateral line nerve
relationship: part_of ZFA:0005114 ! middle lateral line system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001483
name: middle lateral line ganglion
namespace: zebrafish_anatomy
def: "The middle lateral line ganglion develops from a cranial ectodermal placode and contains sensory neurons that innervate the middle lateral line." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061101-27
is_a: ZFA:0000120 ! lateral line ganglion
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005114 ! middle lateral line system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001484
name: superficial blastomere
namespace: zebrafish_anatomy
def: "Cells (completely cleaved), located at the surface of the blastodisc, above the deep blastomeres. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061101-28
is_a: ZFA:0000093 ! blastomere
relationship: end ZFS:0000015 ! Blastula:Dome
relationship: start ZFS:0000007 ! Cleavage:64-cell
[Term]
id: ZFA:0001485
name: basal lamina
namespace: zebrafish_anatomy
def: "Acellular anatomical structure that consists of a thin sheet of fibrous proteins that underlie and support the cells of an epithelium. It separates the cells of an epithelium from any underlying tissue." [ZFIN:curator]
xref: CARO:0000065
xref: ZFIN:ZDB-ANAT-070517-1
is_a: ZFA:0000382 ! acellular anatomical structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001486
name: epithelium
namespace: zebrafish_anatomy
def: "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina." [ZFIN:curator]
xref: CARO:0000066
xref: ZFIN:ZDB-ANAT-070517-2
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001487
name: portion of organism substance
namespace: zebrafish_anatomy
def: "Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body." [ZFIN:curator]
xref: CARO:0000006
xref: ZFIN:ZDB-ANAT-070517-3
is_a: ZFA:0100000 ! zebrafish anatomical entity
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001488
name: multi-tissue structure
namespace: zebrafish_anatomy
def: "Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types." [ZFIN:curator]
xref: CARO:0000055
xref: ZFIN:ZDB-ANAT-070517-4
is_a: ZFA:0000037 ! anatomical structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001489
name: compound organ component
namespace: zebrafish_anatomy
def: "Multi-tissue structure that is part of a compound organ." [ZFIN:curator]
xref: CARO:0000019
xref: ZFIN:ZDB-ANAT-070517-5
is_a: ZFA:0001488 ! multi-tissue structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001490
name: cavitated compound organ
namespace: zebrafish_anatomy
def: "Compound organ that contains one or more macroscopic anatomical spaces." [ZFIN:curator]
xref: CARO:0000072
xref: ZFIN:ZDB-ANAT-070517-6
is_a: ZFA:0000496 ! compound organ
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001491
name: solid compound organ
namespace: zebrafish_anatomy
def: "Compound organ that does not contain macroscopic anatomical spaces." [ZFIN:curator]
xref: CARO:0000074
xref: ZFIN:ZDB-ANAT-070517-7
is_a: ZFA:0000496 ! compound organ
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001492
name: simple organ
namespace: zebrafish_anatomy
def: "Multi-tissue structure that is not part of a compound organ." [ZFIN:curator]
xref: CARO:0000021
xref: ZFIN:ZDB-ANAT-070517-8
is_a: ZFA:0001488 ! multi-tissue structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001493
name: atypical epithelium
namespace: zebrafish_anatomy
def: "Epithelium that consists of epithelial cells not arranged in one or more layers." [ZFIN:curator]
xref: CARO:0000071
xref: ZFIN:ZDB-ANAT-070517-9
is_a: ZFA:0001486 ! epithelium
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001494
name: multilaminar epithelium
namespace: zebrafish_anatomy
def: "Epithelium that consists of more than one layer of epithelial cells." [ZFIN:curator]
xref: CARO:0000069
xref: ZFIN:ZDB-ANAT-070517-10
is_a: ZFA:0001486 ! epithelium
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001495
name: unilaminar epithelium
namespace: zebrafish_anatomy
def: "Epithelium that consists of a single layer of epithelial cells." [ZFIN:curator]
xref: CARO:0000073
xref: ZFIN:ZDB-ANAT-070517-11
is_a: ZFA:0001486 ! epithelium
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001496
name: simple columnar epithelium
namespace: zebrafish_anatomy
def: "Unilaminar epithelium that consists of a single layer of columnar cells." [ZFIN:curator]
xref: CARO:0000068
xref: ZFIN:ZDB-ANAT-070517-12
is_a: ZFA:0001495 ! unilaminar epithelium
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001497
name: simple cuboidal epithelium
namespace: zebrafish_anatomy
def: "Unilaminar epithelium that consists of a single layer of cuboidal cells." [ZFIN:curator]
xref: CARO:0000067
xref: ZFIN:ZDB-ANAT-070517-13
is_a: ZFA:0001495 ! unilaminar epithelium
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001498
name: simple squamous epithelium
namespace: zebrafish_anatomy
def: "Unilaminar epithelium that consists of a single layer of squamous cells." [ZFIN:curator]
xref: CARO:0000070
xref: ZFIN:ZDB-ANAT-070517-14
is_a: ZFA:0001495 ! unilaminar epithelium
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001499
name: esophageal epithelium
namespace: zebrafish_anatomy
def: "Simple columnar epithelium that lines the esophagus. Chen et al, 2007." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-15
is_a: ZFA:0001496 ! simple columnar epithelium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000204 ! esophagus
relationship: part_of ZFA:0005123 ! gut epithelium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001500
name: auditory capsule
namespace: zebrafish_anatomy
def: "Bilaterally paired cartilage encasing the semicircular canals of the inner ear." [ZFIN:curator]
synonym: "otic capsule" RELATED []
xref: ZFIN:ZDB-ANAT-070517-16
is_a: ZFA:0001461 ! chondrocranium cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001501
name: cartilage
namespace: zebrafish_anatomy
def: "Portion of tissue which is connective tissue composed of collagen and/or elastin fibers and chondrocytes. Cartilage is avascular and provides both skeletal functions and a framework upon which bone is deposited." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-17
is_a: ZFA:0001632 ! portion of connective tissue
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001502
name: epiphyseal bar
namespace: zebrafish_anatomy
def: "Bilaterally paired medial bar of cartilage formed at midorbit through medial chondrification from triangles of cartilage that later form the junction of the taeniae marginales anterior, taeniae marginales posterior and the epiphyseal bar." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-18
is_a: ZFA:0001461 ! chondrocranium cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001503
name: lamina orbitonasalis
namespace: zebrafish_anatomy
def: "Cranial cartilage which is bilaterally paired and develops as a dorsal plate-like projection of the anterolateral ethmoid plate, which are oriented perpendicular to the ethmoid plate. It fuses dorsally to the taenia marginalis anterior, and it joins the ethmoid cartilage medially." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-19
is_a: ZFA:0001461 ! chondrocranium cartilage
relationship: end ZFS:0000039 ! Larval:Days 7-13
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001504
name: occipital arch cartilage
namespace: zebrafish_anatomy
def: "Cranial cartilage which is a paired anterodorsal projection of the posterior end of the parachordal cartilage. It lies lateral to the notochord, just anterior to the posterior tip of the otic capsule. The bilaterally paired occipital arch cartilages fuse anterodorsally to the posterior edges of the auditory capsules and meet medially as the tectum synoticum (by 12 dpf)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-20
is_a: ZFA:0001461 ! chondrocranium cartilage
relationship: end ZFS:0000038 ! Larval:Day 6
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001505
name: taenia marginalis anterior
namespace: zebrafish_anatomy
def: "Cartilage bar (bilaterally paired) that grows anteroventrally from the epiphyseal bar to join the anterolatera1 edge of the ethmoid plate." [ZFIN:curator]
synonym: "orbital cartilage" RELATED []
xref: ZFIN:ZDB-ANAT-070517-21
is_a: ZFA:0001461 ! chondrocranium cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000290 ! sphenoid region
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001506
name: tectum synoticum
namespace: zebrafish_anatomy
def: "Unpaired thin dorsal sheet of cartilage that partially covers the posterior chondrocranium." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-22
is_a: ZFA:0001461 ! chondrocranium cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001507
name: trabecula cranii
namespace: zebrafish_anatomy
def: "Paired thin medially aligned bar of cartilage that extends from the anterior end of the chondrocranium to just anterior to the anterior end of the notochord. The posterior ends of the trabeculae cranii are continuous with the parachordal cartilages, and they enclose the hypophyseal fenestra." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-23
is_a: ZFA:0001461 ! chondrocranium cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001321 ! neurocranial trabecula
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0001508
name: trabecula communis
namespace: zebrafish_anatomy
def: "Cartilage formed via medial fusion between bilaterally paired trabecula crani." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-24
is_a: ZFA:0001461 ! chondrocranium cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001321 ! neurocranial trabecula
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001509
name: sclerotic cartilage
namespace: zebrafish_anatomy
def: "Bilaterally paired thin continuous band of cartilage that sagitally encircles the eye." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-25
is_a: ZFA:0001461 ! chondrocranium cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001510
name: basihyal cartilage
namespace: zebrafish_anatomy
def: "Median, anterior-most cartilage of hyoid arch. It chondrifies between the anterior tips of the ceratohyal cartilages, anterior to the first copula." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-26
is_a: ZFA:0001460 ! pharyngeal arch cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001402 ! ventral hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001511
name: interhyal cartilage
namespace: zebrafish_anatomy
alt_id: ZFA:0000218
def: "The interhyal is a small rod-like element that connects the ventral and dorsal parts of the hyoid arch. It articulates laterally with the posterior end of the epihyal and medially at the cartilaginous junction between the hyomandibula and the symplectic. It remains cartilaginous in adult zebrafish and other cypriniforms." [ZFIN:curator]
synonym: "interhyal bone" RELATED []
synonym: "stylohyal" RELATED []
xref: ZFIN:ZDB-ANAT-070517-27
is_a: ZFA:0001460 ! pharyngeal arch cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001402 ! ventral hyoid arch
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0001512
name: anatomical group
namespace: zebrafish_anatomy
alt_id: ZFA:0001255
def: "Anatomical structure consisting of at least two non-overlapping organs, multi-tissue aggregates or portion of tissues or cells of different types that does not constitute an organism, organ, multi-tissue aggregate, or portion of tissue." [ZFIN:curator]
xref: CARO:0000054
xref: ZFIN:ZDB-ANAT-070517-28
is_a: ZFA:0000037 ! anatomical structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001513
name: dermomyotome
namespace: zebrafish_anatomy
def: "Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-29
relationship: develops_from ZFA:0000155 ! somite
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001514
name: bone
namespace: zebrafish_anatomy
def: "Portion of tissue which is calcified connective tissue making up the structural elements of the skeletal system." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-116
is_a: ZFA:0001632 ! portion of connective tissue
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001515
name: taenia marginalis posterior
namespace: zebrafish_anatomy
def: "Cartilage bar (bilaterally paired) that is first visible as an anterior extension of the auditory capsule. It grows anteriorly toward the middle of the orbit where it is connected to its mate on the other side by the epiphyseal bar." [ZFIN:curator]
synonym: "orbital cartilage" RELATED []
xref: ZFIN:ZDB-ANAT-070928-117
is_a: ZFA:0001461 ! chondrocranium cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000290 ! sphenoid region
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001516
name: ceratobranchial cartilage
namespace: zebrafish_anatomy
def: "Small rod-like cartilage that forms between the hypobranchial and the epibranchial cartilage." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-118
is_a: ZFA:0001460 ! pharyngeal arch cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001517
name: ceratobranchial 2 cartilage
namespace: zebrafish_anatomy
def: "Small rod-like cartilage that forms between hypobranchial 2 and epibranchial 2." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-119
is_a: ZFA:0001516 ! ceratobranchial cartilage
relationship: end ZFS:0000039 ! Larval:Days 7-13
relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0001518
name: ceratobranchial 3 cartilage
namespace: zebrafish_anatomy
def: "Small rod-like cartilage that forms between hypobranchial 3 and epibranchial 3." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-120
is_a: ZFA:0001516 ! ceratobranchial cartilage
relationship: end ZFS:0000039 ! Larval:Days 7-13
relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0001519
name: ceratobranchial 4 cartilage
namespace: zebrafish_anatomy
def: "Small rod-like cartilage that forms between hypobranchial 4 and epibranchial 4." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-121
is_a: ZFA:0001516 ! ceratobranchial cartilage
relationship: end ZFS:0000039 ! Larval:Days 7-13
relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0001520
name: ceratobranchial 1 cartilage
namespace: zebrafish_anatomy
def: "Small rod-like cartilage that forms between hypobranchial 1 and epibranchial 1." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-122
is_a: ZFA:0001516 ! ceratobranchial cartilage
relationship: end ZFS:0000039 ! Larval:Days 7-13
relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001521
name: ceratobranchial 5 cartilage
namespace: zebrafish_anatomy
def: "Small rod-like cartilage that forms between hypobranchial 5 and epibranchial 5." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-123
is_a: ZFA:0001516 ! ceratobranchial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001522
name: hypobranchial cartilage
namespace: zebrafish_anatomy
def: "Small rod-like cartilage that forms between the median copulae and the ceratobranchial cartilages." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-124
is_a: ZFA:0001460 ! pharyngeal arch cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001523
name: hypobranchial 4 cartilage
namespace: zebrafish_anatomy
def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 4; these are not obviously present in mature specimens, due either to resorption or fusion to the cartilaginous anterior tip of ceratobranchial 4." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-125
is_a: ZFA:0001522 ! hypobranchial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001524
name: hypobranchial 1 cartilage
namespace: zebrafish_anatomy
def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 1, lateral to copula 1." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-126
is_a: ZFA:0001522 ! hypobranchial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001525
name: hypobranchial 2 cartilage
namespace: zebrafish_anatomy
def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 2, lateral to copula 1." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-127
is_a: ZFA:0001522 ! hypobranchial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001526
name: hypobranchial 3 cartilage
namespace: zebrafish_anatomy
def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 3, lateral to copula 1." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-128
is_a: ZFA:0001522 ! hypobranchial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001527
name: epibranchial cartilage
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-129
is_a: ZFA:0001460 ! pharyngeal arch cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001528
name: epibranchial 1 cartilage
namespace: zebrafish_anatomy
def: "Small rod-like cartilage that forms between the lateral tip of ceratobranchial 1 and the medial end of pharyngobranchial 1." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-130
is_a: ZFA:0001527 ! epibranchial cartilage
relationship: end ZFS:0000040 ! Larval:Days 14-20
relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001529
name: epibranchial 3 cartilage
namespace: zebrafish_anatomy
def: "Small rod-like cartilage that forms between the lateral tip of ceratobranchial 3 and the medial end of pharyngobranchial 3." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-131
is_a: ZFA:0001527 ! epibranchial cartilage
relationship: end ZFS:0000039 ! Larval:Days 7-13
relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001530
name: epibranchial 2 cartilage
namespace: zebrafish_anatomy
def: "Small rod-like cartilage that forms between the lateral tip of ceratobranchial 2 and the medial end of pharyngobranchial 2." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-132
is_a: ZFA:0001527 ! epibranchial cartilage
relationship: end ZFS:0000040 ! Larval:Days 14-20
relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001531
name: epibranchial 4 cartilage
namespace: zebrafish_anatomy
def: "Small rod-like cartilage that forms between the lateral tip of ceratobranchial 4 and the medial end of pharyngobranchial 4." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-133
is_a: ZFA:0001527 ! epibranchial cartilage
relationship: end ZFS:0000039 ! Larval:Days 7-13
relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001532
name: axial bone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-134
is_obsolete: true
[Term]
id: ZFA:0001533
name: pharyngobranchial cartilage
namespace: zebrafish_anatomy
def: "Paired cartilages that project medially from the medial tips of epibranchials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-135
is_a: ZFA:0001460 ! pharyngeal arch cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001534
name: pharyngobranchial 3 cartilage
namespace: zebrafish_anatomy
def: "Paired elongate cartilages that lie posteromedial to epibranchial 2 and medial to epibranchial 3." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-136
is_a: ZFA:0001533 ! pharyngobranchial cartilage
relationship: end ZFS:0000040 ! Larval:Days 14-20
relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001535
name: median fin cartilage
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-137
is_a: ZFA:0001457 ! postcranial axial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001536
name: pharyngobranchial 2 cartilage
namespace: zebrafish_anatomy
def: "Paired disc-like cartilage lying medial to and between the medial tips of epibranchials 1 and 2." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-138
is_a: ZFA:0001533 ! pharyngobranchial cartilage
relationship: end ZFS:0000041 ! Larval:Days 21-29
relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001537
name: mesocorocoid cartilage
namespace: zebrafish_anatomy
def: "Cartilage that develops initially on the medial side of the coraco-scapular cartilage." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-139
is_a: ZFA:0000257 ! pectoral fin cartilage
relationship: end ZFS:0000040 ! Larval:Days 14-20
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001538
name: pelvic radial cartilage
namespace: zebrafish_anatomy
def: "Small cartilage that forms at the posterior edge of the basipterygium." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-140
is_a: ZFA:0001459 ! pelvic fin cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001539
name: basipterygium cartilage
namespace: zebrafish_anatomy
def: "Bilaterally paired small, rodlike cartilages on the ventral surface of the abdomen (present at 7.9 mm). Their posterior tips expand laterally, forming L-shaped cartilages. Medially, a posterior spur of cartilage develops, which will later ossify as the ischiac process (Weitzman 1962)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-141
is_a: ZFA:0001459 ! pelvic fin cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001540
name: pelvic radial 3 cartilage
namespace: zebrafish_anatomy
def: "Small cartilage that forms at the posterior and medial edge of the basipterygium." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-142
is_a: ZFA:0001538 ! pelvic radial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001541
name: pelvic radial 2 cartilage
namespace: zebrafish_anatomy
def: "Small cartilage with a long posterior process and a shorter lateral one that forms at the posterior edge of the basipterygium, between radial cartilages 1 and 2." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-143
is_a: ZFA:0001538 ! pelvic radial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001542
name: pelvic radial 1 cartilage
namespace: zebrafish_anatomy
def: "Small cartilage that forms at the posterior and lateral edge of the basipterygium." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-144
is_a: ZFA:0001538 ! pelvic radial cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001543
name: paired fin cartilage
namespace: zebrafish_anatomy
def: "Cartilage which is part of one of the paired fins." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-145
is_a: ZFA:0001501 ! cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000027 ! paired fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001544
name: chondrocranium bone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-146
is_obsolete: true
[Term]
id: ZFA:0001545
name: cranial bone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-147
is_obsolete: true
[Term]
id: ZFA:0001546
name: pharyngeal arch bone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-148
is_obsolete: true
[Term]
id: ZFA:0001547
name: dermatocranium bone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-149
is_obsolete: true
[Term]
id: ZFA:0001548
name: axial fin bone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-150
is_obsolete: true
[Term]
id: ZFA:0001549
name: paired fin bone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-151
is_obsolete: true
[Term]
id: ZFA:0001550
name: caudal fin lepidotrichium
namespace: zebrafish_anatomy
def: "Lepidotrichium which is part of the caudal fin." [ZFIN:curator]
synonym: "caudal fin lepidotrichia" RELATED PLURAL []
synonym: "caudal fin ray" RELATED []
xref: ZFIN:ZDB-ANAT-070928-152
is_a: ZFA:0001554 ! lepidotrichium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000862 ! caudal fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001551
name: pectoral fin lepidotrichium
namespace: zebrafish_anatomy
def: "Lepidotrichium which is part of the pectoral fin." [ZFIN:curator]
synonym: "pectoral fin lepidotrichia" RELATED PLURAL []
synonym: "pectoral fin ray" RELATED []
xref: ZFIN:ZDB-ANAT-070928-153
is_a: ZFA:0001554 ! lepidotrichium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000943 ! pectoral fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001552
name: pelvic fin lepidotrichium
namespace: zebrafish_anatomy
def: "Lepidotrichium which is part of the pelvic fin." [ZFIN:curator]
synonym: "pelvic fin lepidotrichia" RELATED PLURAL []
synonym: "pelvic fin ray" RELATED []
xref: ZFIN:ZDB-ANAT-070928-154
is_a: ZFA:0001554 ! lepidotrichium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001387 ! pelvic fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001553
name: fin bone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-155
is_obsolete: true
[Term]
id: ZFA:0001554
name: lepidotrichium
namespace: zebrafish_anatomy
def: "Lepidotrichia are bony, bilatterally paired, segmented dermal ossifications extending from the distal radials. They are formed from paired hemitrichia surrounding actinotrichia. There are usually two more lepidotrichia than distal radials." [ZFIN:curator]
synonym: "lepidotrichia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-070928-156
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001555
name: epibranchial ganglion
namespace: zebrafish_anatomy
def: "Cranial ganglion which develops from an epibranchial placode." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-157
is_a: ZFA:0000013 ! cranial ganglion
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001556
name: sympathetic chain ganglion
namespace: zebrafish_anatomy
def: "Trunk ganglion which is part of a bilaterally paired set of sympathetic ganglia located anterior and lateral to the spinal cord." [ZFIN:curator]
synonym: "paravertebral ganglion" RELATED []
xref: ZFIN:ZDB-ANAT-070928-158
is_a: ZFA:0001573 ! trunk ganglion
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001576 ! sympathetic nervous system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001557
name: pronephric glomerulus
namespace: zebrafish_anatomy
def: "Paired highly vascularized structures of the pronephros which are fused at the midline. Responsible for blood filtration and begins to function between 40 and 48hpf. Drummond, 2000." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-159
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000151 ! pronephros
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001558
name: pronephric tubule
namespace: zebrafish_anatomy
def: "Bilaterally paired tubes connecting the pronephric glomeruli to the pronephric ducts. In zebrafish and other teleosts, the pronephric nephron and tubules form after the pronephric duct, connecting to the anterior-most tip of the pronephric ducts. Drummond, 2000. This region may be analogous to the ciliated neck segment of mammalian and other fish nephrons. href='http://zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-071029-9'>Wingert, 2007." [ZFIN:curator]
synonym: "ciliated neck segment" RELATED []
xref: ZFIN:ZDB-ANAT-070928-160
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000151 ! pronephros
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001559
name: vertebral column
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-161
is_a: ZFA:0000317 ! postcranial axial skeleton
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001560
name: hypural 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-162
is_a: ZFA:0000364 ! hypural
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0001561
name: hypural 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-163
is_a: ZFA:0000364 ! hypural
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0001562
name: hypural 3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-164
is_a: ZFA:0000364 ! hypural
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001563
name: hypural 4
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-165
is_a: ZFA:0000364 ! hypural
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001564
name: hypural 5
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-166
is_a: ZFA:0000364 ! hypural
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001565
name: oocyte stage II
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-167
is_a: ZFA:0001109 ! oocyte
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001265 ! ovarian follicle stage II
relationship: start ZFS:0000043 ! Juvenile:Days 45-89
[Term]
id: ZFA:0001566
name: oocyte stage III
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-168
is_a: ZFA:0001109 ! oocyte
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001266 ! ovarian follicle stage III
relationship: start ZFS:0000043 ! Juvenile:Days 45-89
[Term]
id: ZFA:0001567
name: oocyte stage I
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-169
is_a: ZFA:0001109 ! oocyte
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001263 ! ovarian follicle stage I
relationship: start ZFS:0000043 ! Juvenile:Days 45-89
[Term]
id: ZFA:0001568
name: oocyte stage IV
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-170
is_a: ZFA:0001109 ! oocyte
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001264 ! ovarian follicle stage IV
relationship: start ZFS:0000043 ! Juvenile:Days 45-89
[Term]
id: ZFA:0001569
name: oocyte stage V
namespace: zebrafish_anatomy
synonym: "mature egg" RELATED []
synonym: "unactivated egg" RELATED []
xref: ZFIN:ZDB-ANAT-070928-171
is_a: ZFA:0001109 ! oocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000043 ! Juvenile:Days 45-89
[Term]
id: ZFA:0001570
name: unfertilized egg
namespace: zebrafish_anatomy
synonym: "activated oocyte" RELATED []
xref: ZFIN:ZDB-ANAT-070928-172
is_a: ZFA:0001109 ! oocyte
relationship: end ZFS:0000001 ! Zygote:1-cell
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001571
name: postovulatory follicle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-173
is_a: ZFA:0001110 ! ovarian follicle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001572
name: superior cervical ganglion
namespace: zebrafish_anatomy
def: "Trunk ganglion which is bilaterally paired and located at the anterior end of the sympathetic ganglion chain." [ZFIN:curator]
synonym: "superior sympathetic cervical ganglion" RELATED []
xref: ZFIN:ZDB-ANAT-070928-174
is_a: ZFA:0001573 ! trunk ganglion
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001576 ! sympathetic nervous system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001573
name: trunk ganglion
namespace: zebrafish_anatomy
def: "Ganglion which is located in the trunk." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-175
is_a: ZFA:0000190 ! ganglion
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001574
name: autonomic nervous system
namespace: zebrafish_anatomy
synonym: "ANS" RELATED []
xref: ZFIN:ZDB-ANAT-070928-176
is_a: ZFA:0000396 ! nervous system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001575
name: parasympathetic nervous system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-177
is_a: ZFA:0001574 ! autonomic nervous system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001576
name: sympathetic nervous system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-178
is_a: ZFA:0001574 ! autonomic nervous system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001577
name: premaxilla ascending process
namespace: zebrafish_anatomy
def: "Process of the premaxilla that extends posteriorly and overlays the mesethmoid." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-179
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000567 ! premaxilla
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001578
name: anterior dorsomedial process of autopalatine
namespace: zebrafish_anatomy
def: "In cypriniforms the anterior portion of the palatine has a dorsomedial process which abuts against the mesethmoid. Such a process is not present in other ostariophysans or in other primitive teleosts." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-180
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000620 ! autopalatine
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001579
name: ural vertebra 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-071024-1
is_a: ZFA:0001189 ! vertebra
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000862 ! caudal fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001580
name: neurocranium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-071024-2
is_a: ZFA:0000737 ! cranium
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001581
name: ural centrum 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-071024-3
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001579 ! ural vertebra 2
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001582
name: non-Weberian precaudal vertebra
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-071024-4
is_a: ZFA:0000263 ! precaudal vertebra
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001583
name: preural centrum 1+ ural centrum 1
namespace: zebrafish_anatomy
def: "Vertebra which is the fused centra of preural 1 and ural 1. These elements do not develop independently in zebrafish. Bird and Mabee, 2003." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-071024-5
is_a: ZFA:0001189 ! vertebra
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000862 ! caudal fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001584
name: caudal procurrent ray
namespace: zebrafish_anatomy
def: "Caudal fin ray that is located anterior to the principal caudal fin rays. Caudal procurrent rays are unbranched." [ZFIN:curator]
synonym: "caudal procurrent lepidotrichium" RELATED []
xref: ZFIN:ZDB-ANAT-071024-6
is_a: ZFA:0001550 ! caudal fin lepidotrichium
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001585
name: caudal principal ray
namespace: zebrafish_anatomy
def: "Caudal fin lepidotrichium that is adjacent to a branched ray. Counts of caudal principal rays are taken as the number of branched rays plus two adjacent unbranched rays and counts are typically reported as, for example: 1,8,7,1 (1 unbranched and 8 branched upper rays, 7 branched and 1 unbranched lower rays)." [ZFIN:curator]
synonym: "caudal principal lepidotrichium" RELATED []
xref: ZFIN:ZDB-ANAT-071024-7
is_a: ZFA:0001550 ! caudal fin lepidotrichium
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001586
name: pectoral fin radial
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-071024-8
is_a: ZFA:0000271 ! radial
relationship: develops_from ZFA:0001456 ! pectoral fin endoskeletal disc
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000943 ! pectoral fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001587
name: pectoral fin proximal radial
namespace: zebrafish_anatomy
synonym: "radial" RELATED []
xref: ZFIN:ZDB-ANAT-071024-9
is_a: ZFA:0001586 ! pectoral fin radial
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001588
name: pectoral fin distal radial
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-071024-10
is_a: ZFA:0001586 ! pectoral fin radial
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001589
name: propterygium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-071024-11
is_a: ZFA:0001588 ! pectoral fin distal radial
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001590
name: dermal bone
namespace: zebrafish_anatomy
def: "Intramembranous bone that forms superficially in the organism." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-071024-12
is_a: ZFA:0001635 ! intramembranous bone
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001591
name: endochondral bone
namespace: zebrafish_anatomy
def: "Replacement bone that forms within cartilage." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-071024-13
is_a: ZFA:0001628 ! replacement bone
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001592
name: claustrum bone
namespace: zebrafish_anatomy
def: "Bone that is bilaterally paired endochondral bone with extensions of membrane bone forming part of a dorsolateral protective wall around the neural canal between the back of the skull and the beginning of the neural arch series. The first Weberian ossicle. Most recently, de Pinna and Grande (2003) have proposed the claustrum is homologous to the accessory neural arch of lower teleosts." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-071024-14
is_a: ZFA:0001591 ! endochondral bone
is_a: ZFA:0001636 ! membrane bone
relationship: develops_from ZFA:0000637 ! claustrum cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001593
name: quadrate ventral process
namespace: zebrafish_anatomy
def: "An endochondral bone that is the ventral, posteriorly-oriented bony extension of the quadrate." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-72
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000621 ! quadrate
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001594
name: preopercle horizontal limb
namespace: zebrafish_anatomy
def: "A dermal bone that is the lower, horizontal portion of the preopercle bone." [ZFIN:curator]
synonym: "preopercle horizontal arm" RELATED []
synonym: "preopercle lower limb" RELATED []
xref: ZFIN:ZDB-ANAT-080417-73
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000264 ! preopercle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001595
name: preopercle vertical limb
namespace: zebrafish_anatomy
def: "A dermal bone that is the upper, vertical portion of the preopercle bone." [ZFIN:curator]
synonym: "preopercle upper limb" RELATED []
synonym: "preopercle vertical arm" RELATED []
xref: ZFIN:ZDB-ANAT-080417-74
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000264 ! preopercle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001596
name: joint
namespace: zebrafish_anatomy
def: "Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-75
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001597
name: exoccipital posteroventral region
namespace: zebrafish_anatomy
def: "Endochondral bone which is the posteroventral region of the exoccipital bone." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-76
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000661 ! exoccipital
relationship: part_of ZFA:0001627 ! lagenar capsule
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001598
name: basioccipital posterodorsal region
namespace: zebrafish_anatomy
def: "Endochondral bone which is the posterodorsal region of the basioccipital bone." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-77
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000472 ! basioccipital
relationship: part_of ZFA:0001627 ! lagenar capsule
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001599
name: os suspensorium medial flange
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-080417-78
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001171 ! os suspensorium
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001600
name: neural spine 4
namespace: zebrafish_anatomy
def: "Neural spine that is located on the fourth vertebra." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-79
is_a: ZFA:0001336 ! neural spine
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001601
name: manubrium
namespace: zebrafish_anatomy
synonym: "anterior process" RELATED []
synonym: "horiztonal process" RELATED []
synonym: "manubrium incudus" RELATED []
xref: ZFIN:ZDB-ANAT-080417-80
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000525 ! intercalarium
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001602
name: intercalarium ascending process
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-080417-81
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000525 ! intercalarium
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001603
name: intercalarium articulating process
namespace: zebrafish_anatomy
synonym: "articular process" RELATED []
xref: ZFIN:ZDB-ANAT-080417-82
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000525 ! intercalarium
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001604
name: caudal fin upper lobe
namespace: zebrafish_anatomy
def: "Surface structure that is the dorsal portion of the caudal fin." [ZFIN:curator]
synonym: "caudal fin dorsal lobe" RELATED []
xref: ZFIN:ZDB-ANAT-080417-83
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001058 ! caudal fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001605
name: caudal fin lower lobe
namespace: zebrafish_anatomy
def: "Surface structure that is the ventral portion of the caudal fin." [ZFIN:curator]
synonym: "caudal fin ventral lobe" RELATED []
xref: ZFIN:ZDB-ANAT-080417-84
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001058 ! caudal fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001606
name: pharyngeal arch 3
namespace: zebrafish_anatomy
synonym: "branchial arch 1" RELATED []
xref: ZFIN:ZDB-ANAT-080417-85
is_a: ZFA:0001613 ! pharyngeal arch 3-7
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001607
name: pharyngeal arch 4
namespace: zebrafish_anatomy
synonym: "branchial arch 2" RELATED []
xref: ZFIN:ZDB-ANAT-080417-86
is_a: ZFA:0001613 ! pharyngeal arch 3-7
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001608
name: pharyngeal arch 5
namespace: zebrafish_anatomy
synonym: "branchial arch 3" RELATED []
xref: ZFIN:ZDB-ANAT-080417-87
is_a: ZFA:0001613 ! pharyngeal arch 3-7
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001609
name: pharyngeal arch 6
namespace: zebrafish_anatomy
synonym: "branchial arch 4" RELATED []
xref: ZFIN:ZDB-ANAT-080417-88
is_a: ZFA:0001613 ! pharyngeal arch 3-7
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001610
name: pharyngeal arch 7
namespace: zebrafish_anatomy
synonym: "branchial arch 5" RELATED []
xref: ZFIN:ZDB-ANAT-080417-89
is_a: ZFA:0001613 ! pharyngeal arch 3-7
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001611
name: pharyngeal arch 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-080417-90
is_a: ZFA:0001306 ! pharyngeal arch
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001612
name: pharyngeal arch 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-080417-91
is_a: ZFA:0001306 ! pharyngeal arch
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001613
name: pharyngeal arch 3-7
namespace: zebrafish_anatomy
alt_id: ZFA:0000515
synonym: "branchial arch" RELATED []
synonym: "gill arch" RELATED []
xref: ZFIN:ZDB-ANAT-080417-92
is_a: ZFA:0001306 ! pharyngeal arch
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001614
name: atrial endocardium
namespace: zebrafish_anatomy
def: "Endocardium that is part of the atrium." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-93
is_a: ZFA:0001320 ! endocardium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000471 ! atrium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001615
name: ventricular endocardium
namespace: zebrafish_anatomy
def: "Endocardium that is part of the cardiac ventricle." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-94
is_a: ZFA:0001320 ! endocardium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000009 ! cardiac ventricle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001616
name: atrioventricular canal endocardium
namespace: zebrafish_anatomy
def: "Endocardium that is part of the atrioventricular canal." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-95
is_a: ZFA:0001320 ! endocardium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001315 ! atrioventricular canal
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001617
name: otolith
namespace: zebrafish_anatomy
alt_id: ZFA:0000139
def: "MERGED DEFINITION: TARGET DEFINITION: Portion of organism substance composed of calcium carbonate located in the otolith organ. -------------------- SOURCE DEFINITION: Brightly refractile stone-like organ within the otic vesicle and positioned over a sensory macula; two form in each vesicle during the late segmentation period. Kimmel et al, 1995. (Also see Anatomical Atlas entry for otolith by T. Whitfield.)" [ZFIN:curator]
synonym: "immature otolith" RELATED []
synonym: "immature otoliths" RELATED []
xref: ZFIN:ZDB-ANAT-080417-96
is_a: ZFA:0001487 ! portion of organism substance
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000051 ! otic vesicle
relationship: part_of ZFA:0000559 ! otolith organ
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001618
name: pons
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-080417-97
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000029 ! hindbrain
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001619
name: optic fiber layer
namespace: zebrafish_anatomy
def: "Fiber layer adjacent the retinal ganglion cell layer which is comprised of their axons as they traverse to the optic nerve. Leake et al, 1999." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-98
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000046 ! retinal neural layer
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001620
name: proximal convoluted tubule
namespace: zebrafish_anatomy
def: "Most anterior portion of the pronephric duct (or tubule as described by Wingert et al, 2007). Wingert, 2007." [ZFIN:curator]
synonym: "PCT" RELATED []
xref: ZFIN:ZDB-ANAT-080417-99
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000150 ! pronephric duct
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001621
name: proximal straight tubule
namespace: zebrafish_anatomy
def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which is just posterior to the proximal convoluted tubule. Wingert, 2007." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-100
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000150 ! pronephric duct
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001622
name: distal early tubule
namespace: zebrafish_anatomy
def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which is just posterior to the proximal straight tubule. Wingert, 2007." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-101
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000150 ! pronephric duct
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001623
name: posterior pronephric duct
namespace: zebrafish_anatomy
def: "Most posterior portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which ends at the cloacal chamber at the pronephric duct opening. Wingert, 2007." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-102
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000150 ! pronephric duct
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001624
name: distal late tubule
namespace: zebrafish_anatomy
def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which is just posterior to the distal late tubule. Wingert, 2007." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-103
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000150 ! pronephric duct
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001625
name: optic nerve head
namespace: zebrafish_anatomy
def: "Portion of cranial nerve II where large fasicles of axons from the optic fiber layer come together prior to leaving the eye." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-104
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000435 ! cranial nerve II
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001626
name: cerebral spinal fluid
namespace: zebrafish_anatomy
def: "Portion of organism substance that is a clear fluid that occupies the subarachnoid space and the ventricular system around and inside the brain." [ZFIN:curator]
synonym: "CSF" RELATED []
xref: ZFIN:ZDB-ANAT-080417-105
is_a: ZFA:0001487 ! portion of organism substance
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001627
name: lagenar capsule
namespace: zebrafish_anatomy
def: "Anatomical cluster that consists of a bulla formed by the exoccipital and basioccipital bones, and surrounds the lagena." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-106
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001628
name: replacement bone
namespace: zebrafish_anatomy
def: "Bone that forms as a replacement of another structural tissue." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-107
is_a: ZFA:0001514 ! bone
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001629
name: perichordal bone
namespace: zebrafish_anatomy
def: "Replacement bone that forms within the connective tissue surrounding the notochord." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-108
is_a: ZFA:0001628 ! replacement bone
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001630
name: perichondral bone
namespace: zebrafish_anatomy
def: "Replacement bone that forms within the connective tissue surrounding cartilage." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-109
is_a: ZFA:0001628 ! replacement bone
relationship: develops_from ZFA:0001634 ! perichondrium
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001631
name: notochordal ossification
namespace: zebrafish_anatomy
def: "Perichordal bone that surrounds the anterior tip of the notochord." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-110
is_a: ZFA:0001629 ! perichordal bone
relationship: develops_from ZFA:0001633 ! perichordal connective tissue
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001632
name: portion of connective tissue
namespace: zebrafish_anatomy
def: "Portion of tissue that consists of mesodermally derived cells and intercellular matrix comprised of protein fibers and carbohydrates, which supports, ensheathes and binds together other tissues." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-111
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001633
name: perichordal connective tissue
namespace: zebrafish_anatomy
def: "Portion of connective tissue which surrounds the notochord." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-112
is_a: ZFA:0001632 ! portion of connective tissue
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001634
name: perichondrium
namespace: zebrafish_anatomy
def: "Portion of connective tissue which surrounds cartilage." [ZFIN:curator]
synonym: "cartilage connective tissue" RELATED []
xref: ZFIN:ZDB-ANAT-080417-113
is_a: ZFA:0001632 ! portion of connective tissue
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001635
name: intramembranous bone
namespace: zebrafish_anatomy
def: "Bone that forms directly within mesenchyme, and does not replace other tissues." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-114
is_a: ZFA:0001514 ! bone
relationship: develops_from ZFA:0000393 ! mesenchyme
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001636
name: membrane bone
namespace: zebrafish_anatomy
def: "Intramembranous bone that forms deep in the organism." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-115
is_a: ZFA:0001635 ! intramembranous bone
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001637
name: bony projection
namespace: zebrafish_anatomy
def: "Portion of connective tissue that is an extension of a bone." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-116
is_a: ZFA:0001632 ! portion of connective tissue
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001514 ! bone
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001638
name: statoacoustic (VIII) nucleus
namespace: zebrafish_anatomy
synonym: "cochlear nucleus" RELATED []
synonym: "vestibulocochlear nucleus" RELATED []
xref: ZFIN:ZDB-ANAT-080417-117
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000029 ! hindbrain
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001639
name: endothelium
namespace: zebrafish_anatomy
def: "Simple squamous epithelium which lines blood and lymphatic vessels and the heart." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-118
is_a: ZFA:0001498 ! simple squamous epithelium
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001640
name: cephalic flexure
namespace: zebrafish_anatomy
def: "Ventral bend in the brain occuring caudal to the adenohypophyseal placode." [ZFIN:curator]
synonym: "ventral flexure" RELATED []
xref: ZFIN:ZDB-ANAT-080417-119
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000008 ! brain
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001641
name: rudimentary neural arch
namespace: zebrafish_anatomy
def: "Neural arch on the urostyle. It does not support a neural spine. Sanger and McCune 2002." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-120
is_a: ZFA:0001066 ! neural arch
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000158 ! urostyle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001642
name: tooth row
namespace: zebrafish_anatomy
def: "Anatomical cluster consisting of adjacent teeth constituting a row." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-121
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001643
name: anatomical space
namespace: zebrafish_anatomy
def: "Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures." [ZFIN:curator]
xref: CARO:0000005
xref: ZFIN:ZDB-ANAT-080417-122
is_a: ZFA:0100000 ! zebrafish anatomical entity
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0001644
name: articular cartilage
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-080417-123
is_a: ZFA:0001460 ! pharyngeal arch cartilage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001645
name: angular bone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-080417-124
is_a: ZFA:0001590 ! dermal bone
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001646
name: anal fin radial
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-080417-125
is_a: ZFA:0000271 ! radial
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001647
name: dorsal fin radial
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-080417-126
is_a: ZFA:0000271 ! radial
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005000
name: basal communicating artery
namespace: zebrafish_anatomy
synonym: "BCA" RELATED []
xref: ZFIN:ZDB-ANAT-050915-120
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001267 ! cranial vasculature
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0005001
name: posterior communicating artery
namespace: zebrafish_anatomy
def: "An artery that connects caudal division of the internal carotid artery and the basal communicating artery to the basilar artery. Isogai et al. 2001." [ZFIN:curator]
synonym: "caudal communicating segment" RELATED []
synonym: "PCA" RELATED []
synonym: "PCS" RELATED []
synonym: "posterior communicating segment of the basilar artery" RELATED []
xref: ZFIN:ZDB-ANAT-050915-121
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0005002
name: basilar artery
namespace: zebrafish_anatomy
synonym: "BA" RELATED []
xref: ZFIN:ZDB-ANAT-050915-122
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001267 ! cranial vasculature
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0005003
name: pharyngeal vasculature
namespace: zebrafish_anatomy
synonym: "branchial basket" RELATED []
synonym: "branchial vasculature" RELATED []
xref: ZFIN:ZDB-ANAT-050915-123
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001267 ! cranial vasculature
relationship: part_of ZFA:0001306 ! pharyngeal arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005004
name: aortic arch
namespace: zebrafish_anatomy
synonym: "aortic arches" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050915-124
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005003 ! pharyngeal vasculature
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0005005
name: aortic arch 1
namespace: zebrafish_anatomy
synonym: "AA1" RELATED []
synonym: "mandibular aortic arch" RELATED []
xref: ZFIN:ZDB-ANAT-050915-125
is_a: ZFA:0005004 ! aortic arch
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0005006
name: aortic arch 2
namespace: zebrafish_anatomy
synonym: "AA2" RELATED []
synonym: "hyoid aortic arch" RELATED []
xref: ZFIN:ZDB-ANAT-050915-126
is_a: ZFA:0005004 ! aortic arch
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0005007
name: aortic arch 3
namespace: zebrafish_anatomy
def: "Aortic arches 3 and 4 are not remodeled but are retained largely intact as the branchial arteries providing circulation through the gills. These arches are direct branches from the ventral aorta to the lateral dorsal aorta. Isogai et al. 2001." [ZFIN:curator]
synonym: "AA3" RELATED []
xref: ZFIN:ZDB-ANAT-050915-127
is_a: ZFA:0005004 ! aortic arch
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005008
name: aortic arch 4
namespace: zebrafish_anatomy
def: "Aortic arches 3 and 4 are not remodeled but are retained largely intact as the branchial arteries providing circulation through the gills. These arches are direct branches from the ventral aorta to the lateral dorsal aorta. Isogai et al. 2001." [ZFIN:curator]
synonym: "AA4" RELATED []
xref: ZFIN:ZDB-ANAT-050915-128
is_a: ZFA:0005004 ! aortic arch
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005009
name: aortic arch 5
namespace: zebrafish_anatomy
def: "The fifth and sixth arches, which come on-line at approximately 2.5 dpf, have a common trunk from the ventral aorta and drain to the midline dorsal aorta via an independent route. The fifth and sixth aortic arches supply the trunk and tail with oxygenated blood.Isogai et al. 2001." [ZFIN:curator]
synonym: "AA5" RELATED []
xref: ZFIN:ZDB-ANAT-050915-129
is_a: ZFA:0005004 ! aortic arch
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0005010
name: mid cerebral vein
namespace: zebrafish_anatomy
def: "The mesencephalic veins (MsV) enter the mid cerebral veins (MCeV) at the dorsal midline. THe MCeVs originate at the dorsal midline, proceede lateraly in a ventral direction to drain into the paired primordial midbrain channels (PHBC). Isogai et al. 2001., Kimmel et al. 1993" [ZFIN:curator]
synonym: "MCeV" RELATED []
synonym: "mid-cerebral vein" RELATED []
synonym: "middle cerebral vein" RELATED []
xref: ZFIN:ZDB-ANAT-050915-82
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001267 ! cranial vasculature
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0005011
name: pseudobranchial artery
namespace: zebrafish_anatomy
def: "A vascular loop attached to the efferent part of the mandibular arch that forms at 3.5 dpf. Isogai et al. 2001." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050915-130
is_a: ZFA:0000005 ! artery
relationship: develops_from ZFA:0005005 ! aortic arch 1
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0005012
name: afferent filamental artery
namespace: zebrafish_anatomy
synonym: "AFA" RELATED []
synonym: "afferent filamental arteries" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050915-131
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000666 ! filamental artery
relationship: part_of ZFA:0000716 ! afferent branchial artery
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005013
name: concurrent branch afferent branchial artery
namespace: zebrafish_anatomy
def: "The branch of the afferent branchial artery that continues posteriodorsally. Isogai et al. 2001." [ZFIN:curator]
synonym: "CCB" RELATED []
xref: ZFIN:ZDB-ANAT-050915-132
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000716 ! afferent branchial artery
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005014
name: recurrent branch afferent branchial artery
namespace: zebrafish_anatomy
def: "The anterioventral proceeding branch of the afferent branchial artery. Isogai et al. 2001." [ZFIN:curator]
synonym: "RCB" RELATED []
synonym: "recurrent branch afferent branchial arteries" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050915-133
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000716 ! afferent branchial artery
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005015
name: afferent lamellar arteriole
namespace: zebrafish_anatomy
synonym: "afferent lamellar arterioles" RELATED PLURAL []
synonym: "AFL" RELATED []
xref: ZFIN:ZDB-ANAT-050915-134
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000211 ! gill lamella
relationship: part_of ZFA:0005012 ! afferent filamental artery
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005016
name: aortic arch 6
namespace: zebrafish_anatomy
def: "The fifth and sixth arches, which come on-line at approximately 2.5 dpf, have a common trunk from the ventral aorta and drain to the midline dorsal aorta via an independent route. The fifth and sixth aortic arches supply the trunk and tail with oxygenated blood. Isogai et al. 2001." [ZFIN:curator]
synonym: "AA6" RELATED []
xref: ZFIN:ZDB-ANAT-050915-135
is_a: ZFA:0005004 ! aortic arch
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0005017
name: primordial midbrain channel
namespace: zebrafish_anatomy
def: "The vessel between the anterior cerebral vein and the mid cerebral vein. Isogai et al. 2001." [ZFIN:curator]
synonym: "PMBC" RELATED []
xref: ZFIN:ZDB-ANAT-050915-83
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001267 ! cranial vasculature
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0005018
name: efferent filamental artery
namespace: zebrafish_anatomy
synonym: "EFA" RELATED []
xref: ZFIN:ZDB-ANAT-050915-136
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000202 ! efferent branchial artery
relationship: part_of ZFA:0000666 ! filamental artery
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005019
name: efferent lamellar arteriole
namespace: zebrafish_anatomy
synonym: "efferent lamellar arterioles" RELATED PLURAL []
synonym: "ELA" RELATED []
xref: ZFIN:ZDB-ANAT-050915-137
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000211 ! gill lamella
relationship: part_of ZFA:0005018 ! efferent filamental artery
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005020
name: central artery
namespace: zebrafish_anatomy
def: "Arteries that irrigate the forebrain and midbrain Isogai et al. 2001." [ZFIN:curator]
synonym: "CtA" RELATED []
xref: ZFIN:ZDB-ANAT-050915-138
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000099 ! brain vasculature
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005021
name: cerebellar central artery
namespace: zebrafish_anatomy
def: "Extend upward from the PCS, branch to provide an arterial feed to the hindbrain, then drain back down into the PHBC Isogai et al. 2001." [ZFIN:curator]
synonym: "CCtA" RELATED []
xref: ZFIN:ZDB-ANAT-050915-139
is_a: ZFA:0005020 ! central artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0005022
name: opercular artery
namespace: zebrafish_anatomy
def: "The opercular artery arises from the hyoid stump on the first aortic arch, then follows the lateral margin of the operculum (gill covering) ventrally to reconnect into the proximal part of the first aortic arch. Isogai et al. 2001." [ZFIN:curator]
synonym: "external carotid artery" RELATED []
synonym: "ORA" RELATED []
xref: ZFIN:ZDB-ANAT-050915-140
is_a: ZFA:0000005 ! artery
relationship: develops_from ZFA:0005006 ! aortic arch 2
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005023
name: hematopoietic system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-051116-11
is_a: ZFA:0001439 ! anatomical system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0005024
name: trunk vasculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-84
is_a: ZFA:0001079 ! vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0005025
name: dorsal longitudinal anastomotic vessel
namespace: zebrafish_anatomy
def: "Trunk vessel that connects to the primitive hindbrain channel and the basilar artery at the caudal end of the medulla oblongata. Isogai et al. 2001." [ZFIN:curator]
synonym: "DLAV" RELATED []
xref: ZFIN:ZDB-ANAT-050915-85
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0005024 ! trunk vasculature
relationship: part_of ZFA:0005037 ! tail vasculature
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005026
name: primary head sinus
namespace: zebrafish_anatomy
def: "Main route for venous drainage of the anterior and mid cerebral veins as well as portions of the primordial hindbrain channel. Isogai et al. 2001." [ZFIN:curator]
synonym: "lateral head vein" RELATED []
synonym: "PHS" RELATED []
xref: ZFIN:ZDB-ANAT-050915-86
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001267 ! cranial vasculature
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005027
name: posterior cerebral vein
namespace: zebrafish_anatomy
def: "Vein that drains the dorsal longitudinal vessel and the caudal portions of the venous capillary network of the medulla oblongata. Isogai et al. 2001." [ZFIN:curator]
synonym: "caudal cerebral vein" RELATED []
synonym: "PCeV" RELATED []
xref: ZFIN:ZDB-ANAT-050915-87
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001267 ! cranial vasculature
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005028
name: ventral wall of dorsal aorta
namespace: zebrafish_anatomy
def: "Region where blood progenitor markers are expressed. Probable site of definitive hematopoiesis between 36hpf and 4dpf." [ZFIN:curator]
synonym: "AGM" RELATED []
synonym: "aorta gonad mesonephros region" RELATED []
xref: ZFIN:ZDB-ANAT-051116-12
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000014 ! dorsal aorta
relationship: part_of ZFA:0005023 ! hematopoietic system
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0005029
name: rostral blood island
namespace: zebrafish_anatomy
def: "Hematopoietic tissue derived from the cephalic mesoderm. Predominantly produces myeloid cells. de Jong and Zon 2005." [ZFIN:curator]
synonym: "RBI" RELATED []
xref: ZFIN:ZDB-ANAT-051116-13
relationship: develops_from ZFA:0005041 ! anterior lateral plate mesoderm
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0005023 ! hematopoietic system
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0005030
name: dorsal ciliary vein
namespace: zebrafish_anatomy
synonym: "DCV" RELATED []
xref: ZFIN:ZDB-ANAT-051116-14
is_a: ZFA:0000082 ! vein
relationship: develops_from ZFA:0005082 ! dorsal branch nasal ciliary artery
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001267 ! cranial vasculature
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005031
name: dorsal longitudinal vein
namespace: zebrafish_anatomy
def: "Vessel that connects to the primitive hindbrain channel and the basilar artery at the caudal end of the medulla oblongata. Isogai et al. 2001." [ZFIN:curator]
synonym: "DLV" RELATED []
xref: ZFIN:ZDB-ANAT-051116-15
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000099 ! brain vasculature
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005032
name: optic vein
namespace: zebrafish_anatomy
def: "Vein that connects to the hyaloid vein that drains the eye. External to eye. Isogai et al. 2001." [ZFIN:curator]
synonym: "OV" RELATED []
xref: ZFIN:ZDB-ANAT-051116-16
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0007057 ! ocular vasculature
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0005033
name: vertebral artery
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-051116-17
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0005034
name: parachordal vessel
namespace: zebrafish_anatomy
def: "Vessels run longitudinally along the horizontal myoseptum. These vessels are not functional until after lumenization which occurs near 4 dpf. Isogai et al. 2003." [ZFIN:curator]
synonym: "PAV" RELATED []
xref: ZFIN:ZDB-ANAT-051116-18
is_a: ZFA:0000082 ! vein
relationship: develops_from ZFA:0000477 ! posterior cardinal vein
relationship: develops_from ZFA:0001057 ! intersegmental vein
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0005024 ! trunk vasculature
relationship: part_of ZFA:0005037 ! tail vasculature
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0005035
name: subintestinal vein
namespace: zebrafish_anatomy
synonym: "SIV" RELATED []
xref: ZFIN:ZDB-ANAT-051116-19
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0005024 ! trunk vasculature
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0005036
name: supraintestinal artery
namespace: zebrafish_anatomy
def: "A continuation of the anterior mesenteric artery, which branches out from the dorsal aorta just caudal to the pronephric glomus. Isogai et al. 2001." [ZFIN:curator]
synonym: "SIA" RELATED []
xref: ZFIN:ZDB-ANAT-051116-20
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0005037
name: tail vasculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-051116-21
is_a: ZFA:0001079 ! vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005038
name: supraintestinal vein
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-051116-22
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0005024 ! trunk vasculature
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005039
name: anterior lateral mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-051116-23
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001065 ! lateral mesoderm
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0005040
name: posterior lateral mesoderm
namespace: zebrafish_anatomy
synonym: "PLM" RELATED []
xref: ZFIN:ZDB-ANAT-051116-24
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001065 ! lateral mesoderm
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0005041
name: anterior lateral plate mesoderm
namespace: zebrafish_anatomy
synonym: "ALPM" RELATED []
xref: ZFIN:ZDB-ANAT-051116-25
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000121 ! lateral plate mesoderm
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0005042
name: posterior lateral plate mesoderm
namespace: zebrafish_anatomy
synonym: "PLPM" RELATED []
xref: ZFIN:ZDB-ANAT-051116-26
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000121 ! lateral plate mesoderm
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0005043
name: nevi
namespace: zebrafish_anatomy
def: "An ectopic melanophore accumulation analogous to a nevi (mole) in humans." [ZFIN:curator]
synonym: "f-nevi" RELATED []
xref: ZFIN:ZDB-ANAT-051116-27
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001119 ! dermis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005044
name: optic artery
namespace: zebrafish_anatomy
def: "The artery that carries blood to the eye. It branches from the internal carotid artery and enters the eye ventrally through the optic fissure. Isogai et al. 2001." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-051116-28
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0007057 ! ocular vasculature
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0005045
name: hyaloid artery
namespace: zebrafish_anatomy
def: "Artery that is internal to the eye. Isogai et al. 2001." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-051116-29
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005046 ! hyaloid vessel
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0005046
name: hyaloid vessel
namespace: zebrafish_anatomy
synonym: "hyaloid vasculature" RELATED []
synonym: "hyaloid vessels" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-051116-30
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0007057 ! ocular vasculature
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0005047
name: hyaloid vein
namespace: zebrafish_anatomy
def: "Vein internal to the eye. Isogai et al. 2001." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-051116-31
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005046 ! hyaloid vessel
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0005048
name: primitive prosencephalic artery
namespace: zebrafish_anatomy
def: "Vessel that branches from cranial division of the internal carotid artery, extending laterally around the rostral end of the head. Isogai et al. 2001." [ZFIN:curator]
synonym: "PPrA" RELATED []
xref: ZFIN:ZDB-ANAT-051116-32
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000033 ! Hatching:Long-pec
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0005049
name: prosencephalic artery
namespace: zebrafish_anatomy
def: "After the primitive prosencephalic artery forms it becomes disconnected from the cranial division of the internal carotid artery and instead it connects to the anterior mesencephalic central artery and the communicating vessels of the palatocerebral artery." [ZFIN:curator]
synonym: "PrA" RELATED []
xref: ZFIN:ZDB-ANAT-051116-33
is_a: ZFA:0000005 ! artery
relationship: develops_from ZFA:0005048 ! primitive prosencephalic artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005050
name: palatocerebral artery
namespace: zebrafish_anatomy
def: "The PLA branches ventrally from the CrDI. It extends rostrally along the base of mid- and forebrain, then loops medially and links to the corresponding vessel from the other side of the embryo. Isogai et al. 2001." [ZFIN:curator]
synonym: "PLA" RELATED []
xref: ZFIN:ZDB-ANAT-051116-34
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005051
name: communicating vessel palatocerebral artery
namespace: zebrafish_anatomy
def: "Connect the palatocerebral artery with the prosencephalic atery. Isogai et al. 2001." [ZFIN:curator]
synonym: "CMV" RELATED []
synonym: "communicating vessels" RELATED []
xref: ZFIN:ZDB-ANAT-051116-35
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005052
name: anterior mesencephalic central artery
namespace: zebrafish_anatomy
def: "Arteries that irrigate rostral regions of the midbrain. They extend between the Basial communicating artery to the anterior cerebral vein. Isogai et al. 2001." [ZFIN:curator]
synonym: "AMCtA" RELATED []
synonym: "rostral mesencephalic central artery" RELATED []
xref: ZFIN:ZDB-ANAT-051116-36
is_a: ZFA:0005020 ! central artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005053
name: nasal ciliary artery
namespace: zebrafish_anatomy
synonym: "NCA" RELATED []
xref: ZFIN:ZDB-ANAT-051116-37
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0005054
name: inner optic circle
namespace: zebrafish_anatomy
synonym: "IOC" RELATED []
xref: ZFIN:ZDB-ANAT-051116-38
relationship: develops_from ZFA:0005082 ! dorsal branch nasal ciliary artery
relationship: develops_from ZFA:0005083 ! ventral branch nasal ciliary artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0007057 ! ocular vasculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005055
name: median palatocerebral vein
namespace: zebrafish_anatomy
def: "Drains the PLA loop proceeds straight caudally along the cranial midline just above the pharynx, just below the diencephalon. Forms a 'T' with the palatocerebral veins.Isogai et al. 2001." [ZFIN:curator]
synonym: "MPLV" RELATED []
xref: ZFIN:ZDB-ANAT-051116-39
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001267 ! cranial vasculature
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005056
name: palatocerebral vein
namespace: zebrafish_anatomy
def: "Vein that drains the median palatocerebral vein into the optic vein. Isogai et al. 2001." [ZFIN:curator]
synonym: "PLV" RELATED []
xref: ZFIN:ZDB-ANAT-051116-40
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001267 ! cranial vasculature
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0005057
name: epicardium
namespace: zebrafish_anatomy
def: "External layer of the heart." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060131-63
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005058
name: ventricular epicardium
namespace: zebrafish_anatomy
def: "The external layer of the ventricle bounding the ventricular myocardium. It is formed by a single layer of mesothelial cells supported by a basal lamina, and imbricated with collagen, fibroblasts, and vascular structures in the subepicardial space. Hu et al. 2001.." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060131-64
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000009 ! cardiac ventricle
relationship: part_of ZFA:0005057 ! epicardium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005059
name: trabecular layer
namespace: zebrafish_anatomy
def: "The layer of the myocardium composed of projections of contractile myocytes. The trabecular layer is bounded internally by the the endocardium. Unlike the trabeculations of higher vertebrates, both atrial and ventricular trabeculae of the zebrafish have more strut-like character, and are more uniform without apparent regional differences Hu et al. 2001.." [ZFIN:curator]
synonym: "trabeculae" RELATED []
xref: ZFIN:ZDB-ANAT-060131-65
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001319 ! myocardium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005060
name: trabecular layer of ventricle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-66
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005059 ! trabecular layer
relationship: part_of ZFA:0005061 ! ventricular myocardium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005061
name: ventricular myocardium
namespace: zebrafish_anatomy
def: "Muscular layer of the cardiac ventricle composed of a compact myocardial layer surrounding the trabecular layer Hu et al. 2001.." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060131-67
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000009 ! cardiac ventricle
relationship: part_of ZFA:0001319 ! myocardium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005062
name: compact layer of ventricle
namespace: zebrafish_anatomy
def: "The outer layer the ventricular myocardium, muscle fibers are arranged in a compact form and involved the entire ventricle." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060131-68
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005061 ! ventricular myocardium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005063
name: cardiac conduction system
namespace: zebrafish_anatomy
synonym: "central conduction system" RELATED []
xref: ZFIN:ZDB-ANAT-060331-61
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005064
name: atrioventricular valve
namespace: zebrafish_anatomy
def: "The atrioventricular valve has four distinct leaflets oriented anterior, posterior, left, and right of the atrioventricular orifice. Hu et al. 2001." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060131-69
is_a: ZFA:0005065 ! heart valve
relationship: develops_from ZFA:0001317 ! endocardial cushion
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000009 ! cardiac ventricle
relationship: part_of ZFA:0000471 ! atrium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005065
name: heart valve
namespace: zebrafish_anatomy
synonym: "heart valves" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060131-70
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0005066
name: bulbus arteriosus outer layer
namespace: zebrafish_anatomy
def: "Composed of scattered layers of interrupted elastic lamina. Hu et al. 2001.." [ZFIN:curator]
synonym: "bulbus arteriosus externa" RELATED []
xref: ZFIN:ZDB-ANAT-060131-71
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000173 ! bulbus arteriosus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005067
name: bulbus arteriosus middle layer
namespace: zebrafish_anatomy
def: "Composed of 7-10 layers of helically arranged smooth muscle cells surrounded by a fine network of collagen, reticular, and elastic fibrils. Hu et al. 2001.." [ZFIN:curator]
synonym: "bulbus arteriosus media" RELATED []
xref: ZFIN:ZDB-ANAT-060131-72
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000173 ! bulbus arteriosus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005068
name: bulbus arteriosus inner layer
namespace: zebrafish_anatomy
def: "Composed of subendothelium with longitudinally oriented collagen, reticular fibrils, elastic fibers, and smooth muscle cells bound by a thin endothelial layer. Hu et al. 2001.." [ZFIN:curator]
synonym: "bulbus arteriosus intima" RELATED []
xref: ZFIN:ZDB-ANAT-060131-73
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000173 ! bulbus arteriosus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005069
name: sinoatrial node
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060331-62
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005063 ! cardiac conduction system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005070
name: atrioventricular node
namespace: zebrafish_anatomy
synonym: "AV node" RELATED []
xref: ZFIN:ZDB-ANAT-060331-63
relationship: develops_from ZFA:0005073 ! atrioventricular ring
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000009 ! cardiac ventricle
relationship: part_of ZFA:0000471 ! atrium
relationship: part_of ZFA:0005063 ! cardiac conduction system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005071
name: distal conduction system
namespace: zebrafish_anatomy
synonym: "His-Purkinje system" RELATED []
synonym: "His-Purkinji network" RELATED []
synonym: "HPS" RELATED []
xref: ZFIN:ZDB-ANAT-060331-64
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000009 ! cardiac ventricle
relationship: part_of ZFA:0005063 ! cardiac conduction system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005072
name: endocardial ring
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060331-65
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0001616 ! atrioventricular canal endocardium
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0005073
name: atrioventricular ring
namespace: zebrafish_anatomy
synonym: "AV ring" RELATED []
xref: ZFIN:ZDB-ANAT-060331-66
is_a: ZFA:0005072 ! endocardial ring
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000009 ! cardiac ventricle
relationship: part_of ZFA:0000471 ! atrium
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0005074
name: central cardiac conduction system
namespace: zebrafish_anatomy
def: "Cardiac conduction system, characterized by slow impulse propagation and prolonged refractory periods." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-67
is_a: ZFA:0005063 ! cardiac conduction system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005075
name: peripheral cardiac conduction system
namespace: zebrafish_anatomy
def: "Portion of the cardiac conduction system, with rapid impulse propagation." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-68
is_a: ZFA:0005063 ! cardiac conduction system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005076
name: primordial vasculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-33
is_a: ZFA:0000010 ! cardiovascular system
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0005077
name: vascular cord
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-34
is_a: ZFA:0005076 ! primordial vasculature
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0005078
name: middle mesencephalic central artery
namespace: zebrafish_anatomy
def: "Project rostrally and dorsally from the AMCtA to to irrigate the midportion of the midbrain Isogai et al. 2001." [ZFIN:curator]
synonym: "MMCtA" RELATED []
xref: ZFIN:ZDB-ANAT-060816-35
is_a: ZFA:0005020 ! central artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005079
name: posterior mesencephalic central artery
namespace: zebrafish_anatomy
def: "Project dorsally from BCA to irrigate the caudal part of midbrain Isogai et al. 2001." [ZFIN:curator]
synonym: "caudal mesencephalic central artery" RELATED []
synonym: "PMCtA" RELATED []
xref: ZFIN:ZDB-ANAT-060816-36
is_a: ZFA:0005020 ! central artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005080
name: anterior mesenteric artery
namespace: zebrafish_anatomy
def: "An artery deep in the trunk that connects the dorsal aorta to the supraintestinal artery. Isogai et al. 2001." [ZFIN:curator]
synonym: "AMA" RELATED []
synonym: "rostral mesenteric artery" RELATED []
xref: ZFIN:ZDB-ANAT-060816-37
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0005081
name: internal carotid artery
namespace: zebrafish_anatomy
synonym: "ICA" RELATED []
xref: ZFIN:ZDB-ANAT-060816-38
is_a: ZFA:0000005 ! artery
relationship: develops_from ZFA:0001053 ! primitive internal carotid artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000097 ! carotid artery
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005082
name: dorsal branch nasal ciliary artery
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-39
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0005053 ! nasal ciliary artery
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005083
name: ventral branch nasal ciliary artery
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-40
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0005053 ! nasal ciliary artery
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005084
name: metencephalic artery
namespace: zebrafish_anatomy
def: "These arteies branch dorsally from both sides of the posterior communicating artery looping up to join with the opposite MtA as well as with both middle cerebral veins at the dorsal midline of the head. Isogai et al. 2001." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-41
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0005085
name: nasal artery
namespace: zebrafish_anatomy
def: "The nasal arteries start at the internal carotid artey and travel rostrally, passing along the right and left walls of the nasal sac at the most rostral end of the head. From the nasal sac, the NA flows into the nasal veins. Isogai et al. 2001." [ZFIN:curator]
synonym: "NA" RELATED []
xref: ZFIN:ZDB-ANAT-060816-42
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0005086
name: pectoral artery
namespace: zebrafish_anatomy
def: "The pectoral (subclavian) arteries originate from the dorsal aorta and takes the blood outward into the fin from the paired portion of the dorsal aorta posterior to the last aortic arch. Kimmel et al. 1993" [ZFIN:curator]
synonym: "PA" RELATED []
synonym: "subclavian artery" RELATED []
xref: ZFIN:ZDB-ANAT-060816-43
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005096 ! pectoral fin vasculature
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0005087
name: pectoral vein
namespace: zebrafish_anatomy
synonym: "PV" RELATED []
xref: ZFIN:ZDB-ANAT-060816-44
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005096 ! pectoral fin vasculature
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0005088
name: posterior mesenteric artery
namespace: zebrafish_anatomy
def: "Branch ventrally from the dorsal aorta and anastomose longitudinally along the dorsal wall of the hindgut, forming the caudal part of the supraintestinal artery. Isogai et al. 2001." [ZFIN:curator]
synonym: "caudal mesenteric artery" RELATED []
synonym: "PMA" RELATED []
xref: ZFIN:ZDB-ANAT-060816-45
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0005089
name: swim bladder artery
namespace: zebrafish_anatomy
def: "An elaborate set of vessels that branche off caudally from the anterior mesenteric artery just after the dorsal aorta. The SBA vascular loops are located on the ventral side of the swim bladder. Isogai et al. 2001." [ZFIN:curator]
synonym: "SBA" RELATED []
xref: ZFIN:ZDB-ANAT-060816-46
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0005090
name: hepatic portal vein
namespace: zebrafish_anatomy
synonym: "HPV" RELATED []
synonym: "primary hepatic portal veins" RELATED []
xref: ZFIN:ZDB-ANAT-060816-47
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0005091
name: hepatic sinusoid
namespace: zebrafish_anatomy
def: "Wide thin-walled blood vessels in the liver. In mammals they have neither veinous or arterial markers." [ZFIN:curator]
synonym: "hepatic sinusoids" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060816-48
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005024 ! trunk vasculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005092
name: mesencephalic vein
namespace: zebrafish_anatomy
synonym: "MsV" RELATED []
xref: ZFIN:ZDB-ANAT-060816-49
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005093
name: nasal vein
namespace: zebrafish_anatomy
synonym: "NV" RELATED []
xref: ZFIN:ZDB-ANAT-060816-50
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001267 ! cranial vasculature
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0005094
name: choroidal vascular plexus
namespace: zebrafish_anatomy
def: "Develops adjacent to the pigment epithelium of the eye. The choroidal plexus develops from the primitive mesencephalic artery. Initially blood enters from the mesencephalic central artery, and the dorsal ciliary vein. The plexus drains via the ophthalmic vein. Isogai et al. 2001." [ZFIN:curator]
synonym: "CVP" RELATED []
xref: ZFIN:ZDB-ANAT-060816-51
is_a: ZFA:0001267 ! cranial vasculature
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0005095
name: fin vasculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-52
is_a: ZFA:0001079 ! vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005096
name: pectoral fin vasculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-53
is_a: ZFA:0005095 ! fin vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0005097
name: caudal fin vasculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-54
is_a: ZFA:0005095 ! fin vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005098
name: central ray artery
namespace: zebrafish_anatomy
def: "Positioned in the intraray mesenchym between the hemirays of the lepidotrichia,. Huang et al. 2003." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-55
is_a: ZFA:0005095 ! fin vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005099
name: ray vein
namespace: zebrafish_anatomy
def: "Lie flanking and just lateral to the fin ray, in the interray mesenchyme. Huang et al. 2003." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-56
is_a: ZFA:0005095 ! fin vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005100
name: intervessel commissure
namespace: zebrafish_anatomy
def: "Vessels that travel between artery and veins or vein and vein in a single ray." [ZFIN:curator]
synonym: "intervessel comisures" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060816-57
is_a: ZFA:0005095 ! fin vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005101
name: interray vessel
namespace: zebrafish_anatomy
def: "Vessels that travel between veins in adjacent rays." [ZFIN:curator]
synonym: "interray vessels" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060816-58
is_a: ZFA:0005095 ! fin vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005102
name: presumptive median fin fold
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-59
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0005103
name: presumptive ventral fin fold
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-60
is_a: ZFA:0005102 ! presumptive median fin fold
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0005104
name: presumptive dorsal fin fold
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-61
is_a: ZFA:0005102 ! presumptive median fin fold
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0005105
name: lymph vessel
namespace: zebrafish_anatomy
def: "A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-62
is_a: ZFA:0001079 ! vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0005106
name: longitudinal lateral lymphatic vessel
namespace: zebrafish_anatomy
synonym: "LLL" RELATED []
xref: ZFIN:ZDB-ANAT-060816-63
is_a: ZFA:0005105 ! lymph vessel
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005107
name: pectoral lymphatic vessel
namespace: zebrafish_anatomy
synonym: "PL" RELATED []
xref: ZFIN:ZDB-ANAT-060816-64
is_a: ZFA:0005105 ! lymph vessel
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005108
name: facial lymphatic vessel
namespace: zebrafish_anatomy
synonym: "FL" RELATED []
xref: ZFIN:ZDB-ANAT-060816-65
is_a: ZFA:0005105 ! lymph vessel
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005109
name: jugular lymphatic vessel
namespace: zebrafish_anatomy
synonym: "JL" RELATED []
xref: ZFIN:ZDB-ANAT-060816-66
is_a: ZFA:0005105 ! lymph vessel
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005110
name: thoracic duct
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060816-67
is_a: ZFA:0005105 ! lymph vessel
relationship: develops_from ZFA:0000477 ! posterior cardinal vein
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001073 ! axial vasculature
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0005111
name: medial forebrain bundle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-29
is_a: ZFA:0000145 ! CNS tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005112
name: dorsal lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061211-16
is_a: ZFA:0001469 ! lateral line
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001471 ! posterior lateral line system
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0005113
name: dorsal lateral line neuromast
namespace: zebrafish_anatomy
def: "Neuromast that is part of the dorsal lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromast dorsal" RELATED []
xref: ZFIN:ZDB-ANAT-061211-17
is_a: ZFA:0000243 ! neuromast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005112 ! dorsal lateral line
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0005114
name: middle lateral line system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061211-18
is_a: ZFA:0000034 ! lateral line system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005115
name: primary posterior lateral line primordium
namespace: zebrafish_anatomy
def: "Primordium that forms the first neuromasts of the posterior lateral line. This primordium travels at 1.5-1.7 somites/hour and deposits neuromast that are polarized along the antero-posterior axis." [ZFIN:curator]
synonym: "primary posterior lateral line primordia" RELATED PLURAL []
synonym: "primI" RELATED []
xref: ZFIN:ZDB-ANAT-061211-19
is_a: ZFA:0001157 ! posterior lateral line primordium
relationship: develops_from ZFA:0001156 ! posterior lateral line placode
relationship: end ZFS:0000033 ! Hatching:Long-pec
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0005116
name: secondary posterior lateral line primordium
namespace: zebrafish_anatomy
def: "Second lateral line primordium. These primordia move at 0.2 somites/hour and deposit neuromasts that are polarized in a dorso-ventral direction." [ZFIN:curator]
synonym: "secondary posterior lateral line primordia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-061211-20
is_a: ZFA:0001157 ! posterior lateral line primordium
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0005117
name: anterior lateral line primordium
namespace: zebrafish_anatomy
def: "A migrating group of cells originating from an anterior lateral line placode. The primordium deposits neuromasts and interneuromasts between them during its migration." [ZFIN:curator]
synonym: "anterior lateral line primordia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-061211-21
is_a: ZFA:0000228 ! lateral line primordium
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001468 ! anterior lateral line system
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0005118
name: middle lateral line primordium
namespace: zebrafish_anatomy
def: "A migrating group of cells originating from the middle lateral line placode. The primordium deposits neuromasts with interneuromasts between them." [ZFIN:curator]
synonym: "middle lateral line primordia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-061211-22
is_a: ZFA:0000228 ! lateral line primordium
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0005114 ! middle lateral line system
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0005119
name: barbel primordium
namespace: zebrafish_anatomy
def: "A surface structure that will eventually grow to form a barbel. The primordium is rich in taste buds. The final location for taste buds present in the primordium is the distal tip of the mature barbel." [ZFIN:curator]
synonym: "barbel primordia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-070517-30
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0005120
name: peritoneum
namespace: zebrafish_anatomy
def: "An epithelium that lines the peritoneal cavity." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-31
is_a: ZFA:0001486 ! epithelium
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005121
name: middle lateral line placode
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061211-23
is_a: ZFA:0001310 ! dorsolateral placode
relationship: end ZFS:0000033 ! Hatching:Long-pec
relationship: part_of ZFA:0005114 ! middle lateral line system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005122
name: dorsal axial hypoblast
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061211-24
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0001378 ! axial hypoblast
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0005123
name: gut epithelium
namespace: zebrafish_anatomy
def: "Epithelium lining the lumen of the gut." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061211-25
is_a: ZFA:0001486 ! epithelium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000112 ! gut
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005124
name: intestinal epithelium
namespace: zebrafish_anatomy
def: "Simple columnar epithelium that lines the intestine, sometimes pseudostratified, with absorptive brush-border cells and mucous goblet cells clearly visible. Crosnier et al. 2005" [ZFIN:curator]
synonym: "intestine epithelium" RELATED []
xref: ZFIN:ZDB-ANAT-061211-26
is_a: ZFA:0001496 ! simple columnar epithelium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001338 ! intestine
relationship: part_of ZFA:0005123 ! gut epithelium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005125
name: intestinal villus
namespace: zebrafish_anatomy
def: "The entire digestive tract is lined by well developed villi, which are longest in the intestinal bulb and decrease progressively in size towards the caudal end of the intestine. No crypts are present, but, the regions between the villi, the intervillus pockets, have a crypt-like function. Cells are produced in the intervillus pockets and shed from the villus tips.Crosnier et al. 2005" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061211-27
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005124 ! intestinal epithelium
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0005126
name: intestinal bulb epithelium
namespace: zebrafish_anatomy
def: "Intestinal epithelium which lines the lumen of the intestinal bulb." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061211-28
is_a: ZFA:0005124 ! intestinal epithelium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001076 ! intestinal bulb
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005127
name: mid intestine epithelium
namespace: zebrafish_anatomy
def: "Intestinal epithelium which lines the lumen of the mid intestine." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061211-29
is_a: ZFA:0005124 ! intestinal epithelium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001323 ! mid intestine
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005128
name: posterior intestine epithelium
namespace: zebrafish_anatomy
def: "Intestinal epithelium which lines the lumen of the posterior intestine." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-061211-30
is_a: ZFA:0005124 ! intestinal epithelium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000706 ! posterior intestine
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005129
name: mesentery
namespace: zebrafish_anatomy
def: "A double layer composed of peritoneum that attaches the visceral organs to the body wall." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-32
is_a: ZFA:0001486 ! epithelium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005120 ! peritoneum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005130
name: dorsal mesentery
namespace: zebrafish_anatomy
def: "The mesentery that originates from the dorsal side of the peritoneal cavity." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-33
is_a: ZFA:0005129 ! mesentery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005131
name: parietal peritoneum
namespace: zebrafish_anatomy
def: "The peritoneum that lines the walls of the peritoneal cavity." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-34
is_a: ZFA:0005120 ! peritoneum
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005132
name: visceral peritoneum
namespace: zebrafish_anatomy
def: "The peritoneum that covers the external surfaces of most abdominal organs." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-35
is_a: ZFA:0005120 ! peritoneum
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005133
name: ventral mesentery
namespace: zebrafish_anatomy
def: "The mesentery that originates from the ventral side of the peritoneal cavity." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-36
is_a: ZFA:0005129 ! mesentery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005134
name: dental epithelium
namespace: zebrafish_anatomy
def: "Epithelium that is part of a developing tooth or dental organ." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-37
is_a: ZFA:0001486 ! epithelium
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005135
name: primary dental epithelium
namespace: zebrafish_anatomy
def: "Epithelium that surrounds a primary tooth. This epithelium is committed to formation of replacement teeth." [ZFIN:curator]
synonym: "pharyngeal tooth epithelium" RELATED []
synonym: "tooth epithelium" RELATED []
xref: ZFIN:ZDB-ANAT-070517-38
is_a: ZFA:0005134 ! dental epithelium
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005136
name: inner dental epithelium
namespace: zebrafish_anatomy
def: "Inner layer of the dental organ, composed of ameloblasts." [ZFIN:curator]
synonym: "inner enamel epithelium" RELATED []
xref: ZFIN:ZDB-ANAT-070517-39
is_a: ZFA:0005134 ! dental epithelium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005138 ! dental organ
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005137
name: outer dental epithelium
namespace: zebrafish_anatomy
def: "Outer layer of the dental organ." [ZFIN:curator]
synonym: "outer dental epithelium" RELATED []
xref: ZFIN:ZDB-ANAT-070517-40
is_a: ZFA:0005134 ! dental epithelium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005138 ! dental organ
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005138
name: dental organ
namespace: zebrafish_anatomy
def: "A structure that is involved in tooth formation. A bell shape two layer epithelial structure that descends toward the ceratobranchial 5 bone, enclosing the dental mesenchyme. At later times in tooth development the cells at the apex of the bell may be involved in enameloid formation. This structure remains at the base of the erupted tooth and is the source of replacement teeth." [ZFIN:curator]
synonym: "enamel organ" RELATED []
xref: ZFIN:ZDB-ANAT-070517-41
is_a: ZFA:0001488 ! multi-tissue structure
relationship: develops_from ZFA:0001153 ! tooth placode
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005139
name: dental mesenchyme
namespace: zebrafish_anatomy
def: "Mesenchyme enclosed by dental organ." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-42
is_a: ZFA:0000113 ! head mesenchyme
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005138 ! dental organ
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005140
name: dental papilla
namespace: zebrafish_anatomy
def: "Tissue of the developing tooth. It is composed of pre-odontoblast and undiffentiated mesnchyme cells and connects to the basal lamina." [ZFIN:curator]
synonym: "pharyngeal tooth mesenchyme" RELATED []
synonym: "tooth mesenchyme" RELATED []
xref: ZFIN:ZDB-ANAT-070517-43
is_a: ZFA:0001477 ! portion of tissue
relationship: develops_from ZFA:0005139 ! dental mesenchyme
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005141
name: tooth pulp
namespace: zebrafish_anatomy
def: "Material in the center of the dentine of the mature tooth. In secondary teeth the pulp contains blood vessles and odontoblast." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-44
relationship: develops_from ZFA:0005140 ! dental papilla
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005142
name: enameloid
namespace: zebrafish_anatomy
def: "A dentine-like hypermineralized substance that covers the zebrafish tooth tip." [ZFIN:curator]
synonym: "enamel" RELATED []
xref: ZFIN:ZDB-ANAT-070517-45
is_a: ZFA:0001487 ! portion of organism substance
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005143
name: dentine
namespace: zebrafish_anatomy
def: "Mineralized collagen containing substance that forms the tooth structure." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-46
is_a: ZFA:0001487 ! portion of organism substance
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005144
name: ampullary nerve
namespace: zebrafish_anatomy
def: "A branch of the 8th cranial nerve that innervates the cristae ampullaris." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070517-47
is_a: ZFA:0007009 ! nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000247 ! cranial nerve VIII
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005145
name: muscle
namespace: zebrafish_anatomy
def: "Portion of tissue composed of contractile fibers." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-181
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005146
name: area postrema
namespace: zebrafish_anatomy
def: "An area of medulla oblongata, outside the blood-brain barrier. The apical terminals of the neurons are, in a strategic location either to monitor the chemical constitution of the plasma or to release neurogenic substances into the general circulation. Ma 1997." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-182
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005147
name: regenerating tissue
namespace: zebrafish_anatomy
def: "A portion of tissue that is regrowing after damage or amputation." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-183
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005148
name: apical epidermal cap
namespace: zebrafish_anatomy
def: "Part of the regeneration epithelium closest to the fin." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-184
is_a: ZFA:0005147 ! regenerating tissue
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001389 ! regeneration epithelium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005149
name: distal epidermal cap
namespace: zebrafish_anatomy
def: "Part of regeneration epithelium at the tip of the fin." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-185
is_a: ZFA:0005147 ! regenerating tissue
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001389 ! regeneration epithelium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0005150
name: basal regeneration epithelium
namespace: zebrafish_anatomy
def: "Layer of the wound epidermis that surrounds the blastema." [ZFIN:curator]
synonym: "basal wound epidermis" RELATED []
xref: ZFIN:ZDB-ANAT-070928-186
is_a: ZFA:0005147 ! regenerating tissue
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001389 ! regeneration epithelium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007000
name: macula saccule
namespace: zebrafish_anatomy
synonym: "saccular macula" RELATED []
xref: ZFIN:ZDB-ANAT-070517-48
is_a: ZFA:0000386 ! macula
relationship: develops_from ZFA:0000558 ! posterior macula
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000428 ! saccule
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007001
name: dorso-rostral cluster
namespace: zebrafish_anatomy
def: "Early-forming telencephalic neural cluster. Neurons of the dorso-rostral cluster (drc) extend axons to form the supra-optic tract (SOT) and the anterior commissure (AC). Ross et al., 1992." [ZFIN:curator]
synonym: "dorsorostral cluster" RELATED []
synonym: "drc" RELATED []
xref: ZFIN:ZDB-ANAT-060331-69
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000079 ! telencephalon
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0007002
name: ventro-rostral cluster
namespace: zebrafish_anatomy
def: "Early-forming neural cluster located in the rostral diencephalon. At 19 h, axons arising from the vrc grow caudally to pioneer the tract of the postoptic commissure (TPOC). Ross et al., 1992." [ZFIN:curator]
synonym: "ventrorostral cluster" RELATED []
synonym: "vrc" RELATED []
xref: ZFIN:ZDB-ANAT-060331-70
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0007003
name: ventro-caudal cluster
namespace: zebrafish_anatomy
def: "Early-forming neural cluster of the ventral midbrain. At 16 h, axons of the vcc grow caudally to pioneer the medial longitudinal fasciculus (MLF), which is part of the larger ventral longitudinal tract (VLT). Later, neurons from this cluster project axons rostrally into the tract of the post-optic commissure (TPOC). Ross et al., 1992." [ZFIN:curator]
synonym: "vcc" RELATED []
synonym: "ventrocaudal cluster" RELATED []
xref: ZFIN:ZDB-ANAT-060331-71
is_a: ZFA:0000128 ! midbrain
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0007004
name: epiphysial cluster
namespace: zebrafish_anatomy
def: "Early-developing neuronal cluster of the epiphysis. By 24 hpf the pioneer axon of the dorsoventral diencephalic tract (DVDT) has arisen from the ec and grown ventrally. As this axon encounters axons of the TPOC, it makes a near-90 rostral turn and grows rostrally among axons of the TPOC growing in the opposite direction. Ross et al., 1992." [ZFIN:curator]
synonym: "ec" RELATED []
xref: ZFIN:ZDB-ANAT-060331-72
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000019 ! epiphysis
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0007005
name: hemal prezygapophysis
namespace: zebrafish_anatomy
alt_id: ZFA:0001380
def: "Hemal prezygapophyses are paired, anteromedially directed processes arising from the bases of hemal arches, ligamentously joined to the hemal postzygapophyses of the preceding vertebra. Posterior caudal vertebrae close to the caudal fin lack hemal prezygopophyses." [ZFIN:curator]
synonym: "haemal prezygapophysis" RELATED []
synonym: "hemal prezygopophysis" RELATED []
xref: ZFIN:ZDB-ANAT-070928-187
is_a: ZFA:0001591 ! endochondral bone
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000519 ! hemal arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007006
name: lip
namespace: zebrafish_anatomy
def: "One of the two fleshy folds which surround the opening of the mouth. http://www.medterms.com/script/main/art.asp?articlekey=9458" [ZFIN:curator]
synonym: "lips" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-070928-188
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007007
name: pallium
namespace: zebrafish_anatomy
def: "The mantle of gray matter forming the cerebral cortex. http://www.thefreedictionary.com/pallium" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-189
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000008 ! brain
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007008
name: ventral intermandibularis anterior
namespace: zebrafish_anatomy
def: "Is a mandibular muscle that attaches to Meckel's cartilage and functions during jaw closing. See ZDB-PUB-020703-2 and ZDB-PUB-061010-9." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-127
relationship: develops_from ZFA:0000369 ! intermandibularis
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007009
name: nerve
namespace: zebrafish_anatomy
def: "A portion of tissue which is a fasiculated group of axons." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-190
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007010
name: eminentia thalami
namespace: zebrafish_anatomy
def: "Part of the forebrain that is ventral to the ventral thalamus and dorsal to the preoptic area. See page 44 of the Atlas of Early Zebrafish Brain Development." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-191
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000109 ! forebrain
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007011
name: vagal root
namespace: zebrafish_anatomy
def: "Part of cranial nerve X." [ZFIN:curator]
synonym: "rX" RELATED []
synonym: "vagus root" RELATED []
xref: ZFIN:ZDB-ANAT-070928-192
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000453 ! cranial nerve X
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007012
name: lateral forebrain bundle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-193
is_a: ZFA:0000145 ! CNS tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0007013
name: preplacodal ectoderm
namespace: zebrafish_anatomy
def: "Non neural ectoderm that surrounds the presumptive neural plate and gives rise to neurogenic placodes." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-070928-194
is_a: ZFA:0001178 ! non neural ectoderm
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0007014
name: anterior presumptive neural plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-195
relationship: end ZFS:0000020 ! Gastrula:75%-epiboly
relationship: part_of ZFA:0000063 ! presumptive neural plate
relationship: start ZFS:0000019 ! Gastrula:Shield
[Term]
id: ZFA:0007015
name: posterior presumptive neural plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-196
relationship: end ZFS:0000020 ! Gastrula:75%-epiboly
relationship: part_of ZFA:0000063 ! presumptive neural plate
relationship: start ZFS:0000019 ! Gastrula:Shield
[Term]
id: ZFA:0007016
name: anterior neural plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-197
relationship: develops_from ZFA:0007014 ! anterior presumptive neural plate
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0000132 ! neural plate
relationship: start ZFS:0000021 ! Gastrula:90%-epiboly
[Term]
id: ZFA:0007017
name: posterior neural plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-198
relationship: develops_from ZFA:0007015 ! posterior presumptive neural plate
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000132 ! neural plate
relationship: start ZFS:0000021 ! Gastrula:90%-epiboly
[Term]
id: ZFA:0007018
name: forebrain neural plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-199
relationship: develops_from ZFA:0000062 ! presumptive forebrain
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0007016 ! anterior neural plate
relationship: start ZFS:0000021 ! Gastrula:90%-epiboly
[Term]
id: ZFA:0007019
name: midbrain neural plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-200
relationship: develops_from ZFA:0000148 ! presumptive midbrain
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0007016 ! anterior neural plate
relationship: start ZFS:0000021 ! Gastrula:90%-epiboly
[Term]
id: ZFA:0007020
name: forebrain midbrain boundary neural plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-201
relationship: develops_from ZFA:0001368 ! presumptive forebrain midbrain boundary
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0007016 ! anterior neural plate
relationship: start ZFS:0000021 ! Gastrula:90%-epiboly
[Term]
id: ZFA:0007021
name: spinal cord neural plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-202
relationship: develops_from ZFA:0000417 ! presumptive spinal cord
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0007017 ! posterior neural plate
relationship: start ZFS:0000021 ! Gastrula:90%-epiboly
[Term]
id: ZFA:0007022
name: hindbrain neural plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-203
relationship: develops_from ZFA:0000569 ! presumptive hindbrain
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0007017 ! posterior neural plate
relationship: start ZFS:0000021 ! Gastrula:90%-epiboly
[Term]
id: ZFA:0007023
name: posterior neural keel
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-204
relationship: develops_from ZFA:0007017 ! posterior neural plate
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0000131 ! neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0007024
name: anterior neural keel
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-205
relationship: develops_from ZFA:0007016 ! anterior neural plate
relationship: end ZFS:0000023 ! Segmentation:1-4 somites
relationship: part_of ZFA:0000131 ! neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0007025
name: midbrain neural keel
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-206
relationship: develops_from ZFA:0007019 ! midbrain neural plate
relationship: end ZFS:0000023 ! Segmentation:1-4 somites
relationship: part_of ZFA:0007024 ! anterior neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0007026
name: forebrain neural keel
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-207
relationship: develops_from ZFA:0007018 ! forebrain neural plate
relationship: end ZFS:0000023 ! Segmentation:1-4 somites
relationship: part_of ZFA:0007024 ! anterior neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0007027
name: forebrain midbrain boundary neural keel
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-208
relationship: develops_from ZFA:0007020 ! forebrain midbrain boundary neural plate
relationship: end ZFS:0000023 ! Segmentation:1-4 somites
relationship: part_of ZFA:0007024 ! anterior neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0007028
name: spinal cord neural keel
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-209
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0007023 ! posterior neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0007029
name: hindbrain neural keel
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-210
relationship: develops_from ZFA:0007022 ! hindbrain neural plate
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0007023 ! posterior neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0007030
name: posterior neural rod
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-211
relationship: develops_from ZFA:0007023 ! posterior neural keel
relationship: end ZFS:0000026 ! Segmentation:14-19 somites
relationship: part_of ZFA:0000133 ! neural rod
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0007031
name: anterior neural rod
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-212
relationship: develops_from ZFA:0007024 ! anterior neural keel
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0000133 ! neural rod
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0007032
name: midbrain neural rod
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-213
relationship: develops_from ZFA:0007025 ! midbrain neural keel
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0007031 ! anterior neural rod
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0007033
name: forebrain midbrain boundary neural rod
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-214
relationship: develops_from ZFA:0007027 ! forebrain midbrain boundary neural keel
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0007031 ! anterior neural rod
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0007034
name: forebrain neural rod
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-215
relationship: develops_from ZFA:0007026 ! forebrain neural keel
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0007031 ! anterior neural rod
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0007035
name: spinal cord neural rod
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-216
relationship: end ZFS:0000026 ! Segmentation:14-19 somites
relationship: part_of ZFA:0007030 ! posterior neural rod
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0007036
name: hindbrain neural rod
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-217
relationship: develops_from ZFA:0007029 ! hindbrain neural keel
relationship: end ZFS:0000026 ! Segmentation:14-19 somites
relationship: part_of ZFA:0007030 ! posterior neural rod
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0007037
name: posterior neural tube
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-218
relationship: develops_from ZFA:0007030 ! posterior neural rod
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001135 ! neural tube
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0007038
name: anterior neural tube
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-219
relationship: develops_from ZFA:0007031 ! anterior neural rod
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001135 ! neural tube
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0007039
name: midbrain neural tube
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-220
relationship: develops_from ZFA:0007032 ! midbrain neural rod
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0007038 ! anterior neural tube
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0007040
name: forebrain midbrain boundary neural tube
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-221
relationship: develops_from ZFA:0007033 ! forebrain midbrain boundary neural rod
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0007038 ! anterior neural tube
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0007041
name: forebrain neural tube
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-222
relationship: develops_from ZFA:0007034 ! forebrain neural rod
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0007038 ! anterior neural tube
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0007042
name: spinal cord neural tube
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-223
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0007037 ! posterior neural tube
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0007043
name: hindbrain neural tube
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-224
relationship: develops_from ZFA:0007036 ! hindbrain neural rod
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0007037 ! posterior neural tube
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0007044
name: midbrain hindbrain boundary neural plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-225
relationship: develops_from ZFA:0001187 ! presumptive midbrain hindbrain boundary
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000132 ! neural plate
relationship: start ZFS:0000021 ! Gastrula:90%-epiboly
[Term]
id: ZFA:0007045
name: midbrain hindbrain boundary neural keel
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-226
relationship: develops_from ZFA:0007044 ! midbrain hindbrain boundary neural plate
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0000131 ! neural keel
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0007046
name: midbrain hindbrain boundary neural rod
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-227
relationship: develops_from ZFA:0007045 ! midbrain hindbrain boundary neural keel
relationship: end ZFS:0000026 ! Segmentation:14-19 somites
relationship: part_of ZFA:0000133 ! neural rod
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0007047
name: midbrain hindbrain boundary neural tube
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-070928-228
relationship: develops_from ZFA:0007046 ! midbrain hindbrain boundary neural rod
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001135 ! neural tube
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0007048
name: ventral intermandibularis posterior
namespace: zebrafish_anatomy
def: "Is a mandibular muscle that attaches Meckel's cartilage to the basihyal cartilage and functions in jaw opening. See Hunter et al., 2002 and Lin et al., 2006." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-128
relationship: develops_from ZFA:0000369 ! intermandibularis
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007049
name: adductor mandibulae
namespace: zebrafish_anatomy
def: "Is a mandibular muscle that forms along the palatoquadrates and inserts on Meckel's cartilages and functions in jaw closing. See Hunter et al., 2002 and Hernandez et al., 2005." [ZFIN:curator]
synonym: "dorsal adductor mandibulae" RELATED []
xref: ZFIN:ZDB-ANAT-080417-129
is_a: ZFA:0000236 ! mandibular muscle
relationship: end ZFS:0000041 ! Larval:Days 21-29
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007050
name: constrictor dorsalis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-080417-130
is_a: ZFA:0000236 ! mandibular muscle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007051
name: ventral interhyoideus
namespace: zebrafish_anatomy
def: "Is a hyoid muscle that has attachment sites on the basihyal and the posterior end of the ceratohyals and functions in jaw opening. See Hunter et al., 2002." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-131
is_a: ZFA:0000521 ! hyoid muscle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007052
name: hyohyoideus
namespace: zebrafish_anatomy
def: "Is a hyoid muscle that inserts at the most anterior basibranchial and also at the posterior ends of the ceratohyals and functions in jaw closure. See Hunter et al., 2002." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-132
is_a: ZFA:0000521 ! hyoid muscle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007053
name: dorsal adductor hyomandibulae
namespace: zebrafish_anatomy
def: "Is a hyoid muscle that attaches to the dorsomedial faces of the hyosymplectics. See Hunter et al., 2002." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-080417-133
is_a: ZFA:0000521 ! hyoid muscle
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007054
name: pillar of the anterior semicircular canal
namespace: zebrafish_anatomy
def: "Tissue that divides the utricle from the anterior semicircular canal while the otic vessicle is maturing. The pillar form as pairs of protrusions from opposite sides of the otic vesicle meet and fuse to form a pillar of tissue spanning the lumen. The pillar eventually expands to become the hub of tissue around whose perimeter runs the anterior semicircular canal. Haddon et al., 1996" [ZFIN:curator]
synonym: "anterior pillar" RELATED []
synonym: "anterior pillar of the semicircular canal" RELATED []
xref: ZFIN:ZDB-ANAT-080417-134
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000217 ! inner ear
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0007055
name: pillar of the lateral semicircular canal
namespace: zebrafish_anatomy
def: "Tissue that divides the utricle from the lateral semicircular canal while the otic vessicle is maturing. The pillar form as pairs of protrusions from opposite sides of the otic vesicle meet and fuse to form a pillar of tissue spanning the lumen. The pillar eventually expands to become the hub of tissue around whose perimeter runs the lateral semicircular canal. Haddon et al., 1996" [ZFIN:curator]
synonym: "ventral pillar" RELATED []
synonym: "ventral piller of the semicircular canal" RELATED []
xref: ZFIN:ZDB-ANAT-080417-135
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000217 ! inner ear
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0007056
name: pillar of the posterior semicircular canal
namespace: zebrafish_anatomy
def: "Tissue that divides the utricle from the posterior semicircular canal while the otic vessicle is maturing. The pillar form as pairs of protrusions from opposite sides of the otic vesicle meet and fuse to form a pillar of tissue spanning the lumen. The pillar eventually expands to become the hub of tissue around whose perimeter runs the posterior semicircular canal. Haddon et al., 1996" [ZFIN:curator]
synonym: "posterior pillar" RELATED []
synonym: "posterior pillar of the semicircular" RELATED []
xref: ZFIN:ZDB-ANAT-080417-136
is_a: ZFA:0001477 ! portion of tissue
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000217 ! inner ear
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0007057
name: ocular vasculature
namespace: zebrafish_anatomy
synonym: "eye vasculature" RELATED []
synonym: "optic vasculature" RELATED []
xref: ZFIN:ZDB-ANAT-080417-137
is_a: ZFA:0001267 ! cranial vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0007058
name: roof plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-080417-138
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000012 ! central nervous system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0007059
name: neurogenic field
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-080417-139
relationship: develops_from ZFA:0007013 ! preplacodal ectoderm
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0007060
name: dorsolateral field
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-080417-140
is_a: ZFA:0007059 ! neurogenic field
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007061
name: epibranchial field
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-080417-141
is_a: ZFA:0007059 ! neurogenic field
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0007062
name: olfactory field
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-080417-142
is_a: ZFA:0007059 ! neurogenic field
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009000
name: cell
namespace: zebrafish_anatomy
def: "Minute protoplasmic masses that make up organized tissue, usually consisting of a nucleus which is surrounded by protoplasm which contains the various organelles and is enclosed in the cell or plasma membrane. Cells are the fundamental, structural, and functional units of living organisms." [CL:curator]
xref: CARO:0000013
xref: CL:0000000
xref: ZFIN:ZDB-ANAT-060816-76
is_a: ZFA:0000037 ! anatomical structure
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001094 ! whole organism
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0009001
name: receptor cell (sensu Animalia)
namespace: zebrafish_anatomy
xref: CL:0000006
xref: ZFIN:ZDB-ANAT-070308-1
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009002
name: early embryonic cell
namespace: zebrafish_anatomy
xref: CL:0000007
xref: ZFIN:ZDB-ANAT-070308-2
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009003
name: cranial neural crest cell
namespace: zebrafish_anatomy
xref: CL:0000008
xref: ZFIN:ZDB-ANAT-070308-3
is_a: ZFA:0009165 ! neural crest cell
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009004
name: trunk neural crest cell
namespace: zebrafish_anatomy
xref: CL:0000011
xref: ZFIN:ZDB-ANAT-070308-4
is_a: ZFA:0009165 ! neural crest cell
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009005
name: spermatocyte
namespace: zebrafish_anatomy
def: "A male germ cell that develops from spermatogonia. The euploid primary spermatocytes undergo meiosis and give rise to the haploid secondary spermatocytes which in turn give rise to spermatids." [CL:curator]
xref: CL:0000017
xref: ZFIN:ZDB-ANAT-060131-74
is_a: ZFA:0009000 ! cell
relationship: develops_from ZFA:0001337 ! spermatogonia
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000598 ! testis
relationship: start ZFS:0000043 ! Juvenile:Days 45-89
[Term]
id: ZFA:0009006
name: sperm
namespace: zebrafish_anatomy
def: "A mature male germ cell that develops from a spermatid." [CL:curator]
synonym: "sperm cell" RELATED []
synonym: "spermatozoid" RELATED []
synonym: "spermatozoon" RELATED []
xref: CL:0000019
xref: ZFIN:ZDB-ANAT-070308-5
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009007
name: spermatogonium
namespace: zebrafish_anatomy
def: "An euploid male germ cell of an early stage of spermatogenesis." [CL:curator]
xref: CL:0000020
xref: ZFIN:ZDB-ANAT-070308-6
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009008
name: egg
namespace: zebrafish_anatomy
synonym: "ovum" RELATED []
xref: CL:0000025
xref: ZFIN:ZDB-ANAT-070308-7
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009009
name: neuron neural crest derived
namespace: zebrafish_anatomy
xref: CL:0000029
xref: ZFIN:ZDB-ANAT-070308-8
relationship: develops_from ZFA:0009165 ! neural crest cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009010
name: glioblast
namespace: zebrafish_anatomy
xref: CL:0000030
xref: ZFIN:ZDB-ANAT-050915-148
relationship: develops_from ZFA:0001120 ! neuroectoderm
relationship: develops_from ZFA:0009080 ! neurectodermal cell
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0009011
name: neuroblast
namespace: zebrafish_anatomy
xref: CL:0000031
xref: ZFIN:ZDB-ANAT-070308-9
is_a: ZFA:0009019 ! neuronal stem cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009012
name: neuroplacodal cell
namespace: zebrafish_anatomy
xref: CL:0000032
xref: ZFIN:ZDB-ANAT-070308-10
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009013
name: single fate stem cell
namespace: zebrafish_anatomy
xref: CL:0000035
xref: ZFIN:ZDB-ANAT-070308-11
is_a: ZFA:0009307 ! somatic stem cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009014
name: hematopoietic stem cell
namespace: zebrafish_anatomy
def: "A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system." [CL:curator]
synonym: "colony forming unit hematopoietic" RELATED []
synonym: "hematopoietic progenitor cell" RELATED []
synonym: "hemopoietic progenitor cell" RELATED []
synonym: "hemopoietic stem cell" RELATED []
synonym: "HSC" RELATED []
xref: CL:0000037
xref: ZFIN:ZDB-ANAT-050915-141
is_a: ZFA:0009020 ! multi fate stem cell
relationship: develops_from ZFA:0009258 ! angioblastic mesenchymal cell
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005023 ! hematopoietic system
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0009015
name: erythroid progenitor cell
namespace: zebrafish_anatomy
def: "A progenitor cell committed to the erythroid lineage." [ZFIN:ZDB-PUB-070221-1]
synonym: "BFU-E" RELATED []
synonym: "blast forming unit erythroid" RELATED []
synonym: "burst forming unit erythroid" RELATED []
synonym: "CFU-E" RELATED []
synonym: "colony forming unit erythroid" RELATED []
synonym: "erythroid stem cell" RELATED []
xref: CL:0000038
xref: ZFIN:ZDB-ANAT-070308-12
is_a: ZFA:0009356 ! myeloid progenitor cell
relationship: develops_from ZFA:0009022 ! megakaryocyte erythroid progenitor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009016
name: germ line cell
namespace: zebrafish_anatomy
xref: CL:0000039
xref: ZFIN:ZDB-ANAT-070308-13
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009017
name: monoblast
namespace: zebrafish_anatomy
def: "A progenitor cell committed to the monocyte lineage. http://www.copewithcytokines.de" [CL:curator]
synonym: "CFU-M" RELATED []
synonym: "colony forming unit macrophage" RELATED []
synonym: "monocyte stem cell" RELATED []
xref: CL:0000040
xref: ZFIN:ZDB-ANAT-060331-82
is_a: ZFA:0009356 ! myeloid progenitor cell
relationship: develops_from ZFA:0009251 ! granulocyte monocyte progenitor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009018
name: neutrophilic myeloblast
namespace: zebrafish_anatomy
def: "A myeloblast committed to the neutrophil lineage. A myeloblast is the most primitive precursor in the granulocytic series, having fine, evenly distributed chromatin, several nucleoli, and a nongranular basophilic cytoplasm." [ZFIN:ZDB-PUB-070221-1]
synonym: "myeloblast" RELATED []
synonym: "neutrophilic granuloblast" RELATED []
xref: CL:0000042
xref: ZFIN:ZDB-ANAT-060331-76
is_a: ZFA:0009353 ! myeloblast
relationship: develops_from ZFA:0009352 ! neutrophil progenitor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009019
name: neuronal stem cell
namespace: zebrafish_anatomy
xref: CL:0000047
xref: ZFIN:ZDB-ANAT-070308-14
is_a: ZFA:0009020 ! multi fate stem cell
relationship: develops_from ZFA:0009080 ! neurectodermal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009020
name: multi fate stem cell
namespace: zebrafish_anatomy
def: "A stem cell that can give rise to mulitple lineages of cells." [CL:curator]
synonym: "multipotent stem cell" RELATED []
xref: CL:0000048
xref: ZFIN:ZDB-ANAT-070308-15
is_a: ZFA:0009307 ! somatic stem cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009021
name: common myeloid progenitor
namespace: zebrafish_anatomy
def: "A progenitor cell committed to myeloid lineage, including the megakaryocyte and erythroid lineages." [ZFIN:ZDB-PUB-070221-2]
synonym: "cfu-gemm" RELATED [ZFIN:ZDB-PUB-070221-2]
synonym: "CFU-S" RELATED [ZFIN:ZDB-PUB-070221-2]
synonym: "CMP" RELATED [ZFIN:ZDB-PUB-070221-2]
synonym: "colony forming unit granulocyte, erythrocyte, macrophage, and megakaryocyte" RELATED [ZFIN:ZDB-PUB-070221-2]
synonym: "multipotential myeloid stem cell" RELATED [ZFIN:ZDB-PUB-070221-2]
synonym: "myeloid stem cell" RELATED [ZFIN:ZDB-PUB-070221-2]
synonym: "pluripotent stem cell (bone marrow)" RELATED [ZFIN:ZDB-PUB-070221-2]
xref: CL:0000049
xref: ZFIN:ZDB-ANAT-060331-73
is_a: ZFA:0009356 ! myeloid progenitor cell
relationship: develops_from ZFA:0009014 ! hematopoietic stem cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009022
name: megakaryocyte erythroid progenitor cell
namespace: zebrafish_anatomy
def: "A progenitor cell committed to the megakaryocyte and erythroid lineages." [CL:curator]
synonym: "CFU-EM" RELATED []
synonym: "colony forming unit erythroid megakaryocyte" RELATED []
synonym: "MEP" RELATED []
xref: CL:0000050
xref: ZFIN:ZDB-ANAT-070308-16
is_a: ZFA:0009356 ! myeloid progenitor cell
relationship: develops_from ZFA:0009021 ! common myeloid progenitor
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009023
name: common lymphocyte progenitor
namespace: zebrafish_anatomy
def: "A progenitor cell committed to the lymphoid lineage." [CL:curator]
synonym: "CLP" RELATED []
synonym: "committed lymphopoietic stem cell" RELATED []
synonym: "early lymphocyte progenitor" RELATED []
synonym: "ELP" RELATED []
synonym: "lymphoblast" RELATED []
synonym: "lymphoid stem cell" RELATED []
synonym: "lymphopoietic stem cell" RELATED []
xref: CL:0000051
xref: ZFIN:ZDB-ANAT-050915-142
is_a: ZFA:0009355 ! lymphoid progenitor cell
relationship: develops_from ZFA:0009014 ! hematopoietic stem cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0009024
name: totipotent stem cell
namespace: zebrafish_anatomy
def: "A stem cell from which all cells of the body can form." [CL:curator]
xref: CL:0000052
xref: ZFIN:ZDB-ANAT-070308-17
is_a: ZFA:0009307 ! somatic stem cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009025
name: myoblast
namespace: zebrafish_anatomy
def: "An embryonic (precursor) cell of the myogenic lineage that develops from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes." [CL:curator]
xref: CL:0000056
xref: ZFIN:ZDB-ANAT-050915-157
relationship: develops_from ZFA:0009179 ! muscle stem cell
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0009026
name: fibroblast
namespace: zebrafish_anatomy
def: "A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules." [CL:curator]
xref: CL:0000057
xref: ZFIN:ZDB-ANAT-070308-18
relationship: develops_from ZFA:0009081 ! mesenchymal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009027
name: chondroblast
namespace: zebrafish_anatomy
xref: CL:0000058
xref: ZFIN:ZDB-ANAT-050915-153
relationship: develops_from ZFA:0000041 ! mesoderm
relationship: develops_from ZFA:0009081 ! mesenchymal cell
relationship: develops_from ZFA:0009138 ! mesodermal cell
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0009028
name: ameloblast
namespace: zebrafish_anatomy
def: "A cylindrical epithelial cell in the innermost layer of the enamal organ. Their functions include contribution to the development of the dentinoenamel junction by the deposition of a layer of the matrix, thus producing the foundation for the prisms (the structural units of the dental enamal), and production of the matrix for the enamel prisms and interprismatic substance. (From Jablonski's Dictionary of Dentistry, 1992)." [CL:curator]
xref: CL:0000059
xref: ZFIN:ZDB-ANAT-070308-19
relationship: develops_from ZFA:0009165 ! neural crest cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009029
name: odontoblast
namespace: zebrafish_anatomy
xref: CL:0000060
xref: ZFIN:ZDB-ANAT-070308-20
relationship: develops_from ZFA:0009003 ! cranial neural crest cell
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005141 ! tooth pulp
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009030
name: cementoblast
namespace: zebrafish_anatomy
xref: CL:0000061
xref: ZFIN:ZDB-ANAT-070308-21
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009031
name: osteoblast
namespace: zebrafish_anatomy
def: "A bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone." [CL:curator]
xref: CL:0000062
xref: ZFIN:ZDB-ANAT-070308-22
relationship: develops_from ZFA:0009003 ! cranial neural crest cell
relationship: develops_from ZFA:0009184 ! osteoprogenitor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009032
name: ciliated cell
namespace: zebrafish_anatomy
xref: CL:0000064
xref: ZFIN:ZDB-ANAT-070308-23
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009033
name: ependymal cell
namespace: zebrafish_anatomy
def: "A neurectoderm derived cell that lines the neural lumen." [CL:curator]
synonym: "ependymocyte" RELATED []
xref: CL:0000065
xref: ZFIN:ZDB-ANAT-070308-24
is_a: ZFA:0009035 ! ciliated epithelial cell
relationship: develops_from ZFA:0009306 ! neuroepithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009034
name: epithelial cell
namespace: zebrafish_anatomy
def: "A cell that is usually found in a two-dimensional sheet with a free surface." [CL:curator]
xref: CL:0000066
xref: ZFIN:ZDB-ANAT-070308-25
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009035
name: ciliated epithelial cell
namespace: zebrafish_anatomy
xref: CL:0000067
xref: ZFIN:ZDB-ANAT-070308-26
is_a: ZFA:0009032 ! ciliated cell
is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009036
name: blood vessel endothelial cell
namespace: zebrafish_anatomy
xref: CL:0000071
xref: ZFIN:ZDB-ANAT-050915-152
is_a: ZFA:0009039 ! squamous epithelial cell
is_a: ZFA:0009065 ! endothelial cell
relationship: develops_from ZFA:0000041 ! mesoderm
relationship: develops_from ZFA:0009138 ! mesodermal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009037
name: barrier epithelial cell
namespace: zebrafish_anatomy
xref: CL:0000073
xref: ZFIN:ZDB-ANAT-070308-27
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009038
name: columnar/cuboidal epithelial cell
namespace: zebrafish_anatomy
xref: CL:0000075
xref: ZFIN:ZDB-ANAT-070308-28
is_a: ZFA:0009034 ! epithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009039
name: squamous epithelial cell
namespace: zebrafish_anatomy
xref: CL:0000076
xref: ZFIN:ZDB-ANAT-070308-29
is_a: ZFA:0009034 ! epithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009040
name: mesothelial cell
namespace: zebrafish_anatomy
xref: CL:0000077
xref: ZFIN:ZDB-ANAT-070308-30
is_a: ZFA:0009039 ! squamous epithelial cell
is_a: ZFA:0009130 ! lining cell
relationship: develops_from ZFA:0009138 ! mesodermal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009041
name: peridermal cell
namespace: zebrafish_anatomy
xref: CL:0000078
xref: ZFIN:ZDB-ANAT-070308-31
is_a: ZFA:0009039 ! squamous epithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009042
name: stratified epithelial cell
namespace: zebrafish_anatomy
xref: CL:0000079
xref: ZFIN:ZDB-ANAT-070308-32
relationship: develops_from ZFA:0009180 ! stratified epithelial stem cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009043
name: circulating cell
namespace: zebrafish_anatomy
def: "A cell which moves among different tissues of the body, via blood, lymph, or other medium." [CL:curator]
xref: CL:0000080
xref: ZFIN:ZDB-ANAT-070308-33
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009044
name: blood cell
namespace: zebrafish_anatomy
def: "A cell found predominately in the blood." [CL:curator]
xref: CL:0000081
xref: ZFIN:ZDB-ANAT-070308-34
is_a: ZFA:0009043 ! circulating cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009045
name: epithelial cell of pancreas
namespace: zebrafish_anatomy
xref: CL:0000083
xref: ZFIN:ZDB-ANAT-070308-35
relationship: develops_from ZFA:0009139 ! endodermal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009046
name: T cell
namespace: zebrafish_anatomy
def: "A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex." [ZFIN:ZDB-PUB-070221-3]
synonym: "T lymphocyte" RELATED []
synonym: "T-cell" RELATED []
synonym: "T-lymphocyte" RELATED []
xref: CL:0000084
xref: ZFIN:ZDB-ANAT-050915-145
is_a: ZFA:0009250 ! lymphocyte
relationship: develops_from ZFA:0009350 ! pro-T cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009047
name: osteoclast
namespace: zebrafish_anatomy
def: "A specialized phagocytic cell associated with the absorption and removal of bone." [ZFIN:ZDB-PUB-070221-3]
comment: Osteoclasts develop directly from monocytes.
synonym: "chondroclast" RELATED []
xref: CL:0000092
xref: ZFIN:ZDB-ANAT-070308-36
relationship: develops_from ZFA:0009265 ! monocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009048
name: granulocyte
namespace: zebrafish_anatomy
def: "A leukocyte with abundant granules in the cytoplasm." [CL:curator]
xref: CL:0000094
xref: ZFIN:ZDB-ANAT-060816-79
is_a: ZFA:0009326 ! myeloid leukocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009049
name: mature neutrophil
namespace: zebrafish_anatomy
def: "A fully differentiated neutrophil, a granular leukocyte having a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes." [CL:curator]
synonym: "mature neutrocyte" RELATED []
synonym: "mature neutrophil leucocyte" RELATED []
synonym: "mature neutrophil leukocyte" RELATED []
synonym: "mature neutrophilic leucocyte" RELATED []
synonym: "mature neutrophilic leukocyte" RELATED []
synonym: "neutrophil" RELATED []
synonym: "PMN" RELATED []
synonym: "poly" RELATED []
synonym: "polymorphonuclear leucocyte" RELATED []
synonym: "polymorphonuclear leukocyte" RELATED []
synonym: "polymorphonuclear neutrophil" RELATED []
synonym: "polynuclear neutrophilic leucocyte" RELATED []
synonym: "polynuclear neutrophilic leukocyte" RELATED []
xref: CL:0000096
xref: ZFIN:ZDB-ANAT-060331-81
is_a: ZFA:0009327 ! neutrophil
relationship: develops_from ZFA:0009254 ! band form neutrophil
relationship: develops_from ZFA:0009328 ! immature neutrophil
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009050
name: sensory epithelial cell
namespace: zebrafish_anatomy
xref: CL:0000098
xref: ZFIN:ZDB-ANAT-070308-37
is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell
relationship: develops_from ZFA:0009306 ! neuroepithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009051
name: interneuron
namespace: zebrafish_anatomy
def: "Most generally any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region as contrasted with projection neurons which have axons projecting to other brain regions." [CL:curator]
xref: CL:0000099
xref: ZFIN:ZDB-ANAT-070308-38
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009052
name: motor neuron
namespace: zebrafish_anatomy
def: "A neuron which activate muscle cells." [CL:curator]
synonym: "efferent neuron" RELATED []
synonym: "motoneuron" RELATED []
xref: CL:0000100
xref: ZFIN:ZDB-ANAT-070308-39
is_a: ZFA:0009239 ! efferent neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009053
name: sensory neuron
namespace: zebrafish_anatomy
alt_id: ZFA:0000432
xref: CL:0000101
xref: ZFIN:ZDB-ANAT-011113-357
is_a: ZFA:0009238 ! afferent neuron
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000047 ! peripheral olfactory organ
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0009054
name: polymodal neuron
namespace: zebrafish_anatomy
xref: CL:0000102
xref: ZFIN:ZDB-ANAT-070308-40
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009055
name: bipolar neuron
namespace: zebrafish_anatomy
def: "A type of interneuron that has two neurites, usually an axon and a dendrite, extending from opposite poles of an ovoid cell body." [ZFIN:ZDB-PUB-070221-4]
xref: CL:0000103
xref: ZFIN:ZDB-ANAT-051116-45
is_a: ZFA:0009051 ! interneuron
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000119 ! retinal inner nuclear layer
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009056
name: multipolar neuron
namespace: zebrafish_anatomy
xref: CL:0000104
xref: ZFIN:ZDB-ANAT-070308-41
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009057
name: pseudounipolar neuron
namespace: zebrafish_anatomy
xref: CL:0000105
xref: ZFIN:ZDB-ANAT-070308-42
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009058
name: unipolar neuron
namespace: zebrafish_anatomy
xref: CL:0000106
xref: ZFIN:ZDB-ANAT-070308-43
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009059
name: autonomic neuron
namespace: zebrafish_anatomy
xref: CL:0000107
xref: ZFIN:ZDB-ANAT-070308-44
is_a: ZFA:0009009 ! neuron neural crest derived
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001574 ! autonomic nervous system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009060
name: cholinergic neuron
namespace: zebrafish_anatomy
xref: CL:0000108
xref: ZFIN:ZDB-ANAT-070308-45
is_a: ZFA:0009059 ! autonomic neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009061
name: adrenergic neuron
namespace: zebrafish_anatomy
xref: CL:0000109
xref: ZFIN:ZDB-ANAT-070308-46
is_a: ZFA:0009059 ! autonomic neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009062
name: peptidergic neuron
namespace: zebrafish_anatomy
xref: CL:0000110
xref: ZFIN:ZDB-ANAT-070308-47
is_a: ZFA:0009059 ! autonomic neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009063
name: peripheral neuron
namespace: zebrafish_anatomy
xref: CL:0000111
xref: ZFIN:ZDB-ANAT-070308-48
is_a: ZFA:0009009 ! neuron neural crest derived
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009064
name: mononuclear phagocyte
namespace: zebrafish_anatomy
def: "A vertebrate phagocyte with a single nucleus." [ZFIN:ZDB-PUB-070221-3]
xref: CL:0000113
xref: ZFIN:ZDB-ANAT-060331-84
is_a: ZFA:0009357 ! mononuclear cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009065
name: endothelial cell
namespace: zebrafish_anatomy
xref: CL:0000115
xref: ZFIN:ZDB-ANAT-070308-49
is_a: ZFA:0009130 ! lining cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009066
name: pioneer neuron
namespace: zebrafish_anatomy
alt_id: ZFA:0000409
xref: CL:0000116
xref: ZFIN:ZDB-ANAT-011113-334
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000048 ! olfactory placode
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0009067
name: CNS neuron (sensu Vertebrata)
namespace: zebrafish_anatomy
xref: CL:0000117
xref: ZFIN:ZDB-ANAT-070308-50
is_a: ZFA:0009248 ! neuron
relationship: develops_from ZFA:0009168 ! neuroblast (sensu Vertebrata)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009068
name: basket cell
namespace: zebrafish_anatomy
xref: CL:0000118
xref: ZFIN:ZDB-ANAT-070308-51
is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009069
name: Golgi cell
namespace: zebrafish_anatomy
xref: CL:0000119
xref: ZFIN:ZDB-ANAT-070308-52
is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009070
name: granule cell
namespace: zebrafish_anatomy
xref: CL:0000120
xref: ZFIN:ZDB-ANAT-070308-53
is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009071
name: Purkinje cell
namespace: zebrafish_anatomy
def: "The output neuron of the cerebellar cortex." [CL:curator]
xref: CL:0000121
xref: ZFIN:ZDB-ANAT-070308-54
is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata)
is_a: ZFA:0009239 ! efferent neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009072
name: stellate cell
namespace: zebrafish_anatomy
xref: CL:0000122
xref: ZFIN:ZDB-ANAT-070308-55
is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009073
name: glial cell
namespace: zebrafish_anatomy
alt_id: ZFA:0000025
def: "A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons." [CL:curator]
synonym: "neuroglia" RELATED []
xref: CL:0000125
xref: ZFIN:ZDB-ANAT-010921-436
relationship: develops_from ZFA:0009010 ! glioblast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000396 ! nervous system
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0009074
name: macroglial cell
namespace: zebrafish_anatomy
xref: CL:0000126
xref: ZFIN:ZDB-ANAT-070308-56
is_a: ZFA:0009147 ! glial cell (sensu Vertebrata)
relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009075
name: astrocyte
namespace: zebrafish_anatomy
def: "A class of large neuroglial (macroglial) cells in the central nervous system - the largest and most numerous neuroglial cells in the brain and spinal cord. Astrocytes (from 'star' cells) are irregularly shaped with many long processes, including those with 'end feet' which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and 'reactive astrocytes' (along with microglia) respond to injury." [CL:curator]
xref: CL:0000127
xref: ZFIN:ZDB-ANAT-050915-160
is_a: ZFA:0009074 ! macroglial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009076
name: oligodendrocyte
namespace: zebrafish_anatomy
def: "A class of large neuroglial (macroglial) cells in the central nervous system. Form the insulating myelin sheath of axons in the central nervous system." [CL:curator]
synonym: "oligodendroglia" RELATED []
xref: CL:0000128
xref: ZFIN:ZDB-ANAT-060131-75
is_a: ZFA:0009074 ! macroglial cell
relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009077
name: microglial cell
namespace: zebrafish_anatomy
def: "A small, migratory, phagocytic, interstitial cell of hematopoietic origin found in the central nervous system. Microglial cells are of various forms and may have slender branched processes." [ZFIN:ZDB-PUB-070221-1]
synonym: "microglia" RELATED []
xref: CL:0000129
xref: ZFIN:ZDB-ANAT-070308-57
is_a: ZFA:0009141 ! macrophage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009078
name: gut endothelial cell
namespace: zebrafish_anatomy
xref: CL:0000131
xref: ZFIN:ZDB-ANAT-070308-58
is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell
is_a: ZFA:0009065 ! endothelial cell
relationship: develops_from ZFA:0009139 ! endodermal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009079
name: corneal endothelial cell
namespace: zebrafish_anatomy
def: "Cell of the single layer of large flattened cells covering the surface of the cornea." [CL:curator]
xref: CL:0000132
xref: ZFIN:ZDB-ANAT-070308-59
is_a: ZFA:0009039 ! squamous epithelial cell
is_a: ZFA:0009065 ! endothelial cell
relationship: develops_from ZFA:0009003 ! cranial neural crest cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009080
name: neurectodermal cell
namespace: zebrafish_anatomy
synonym: "neurectoderm cell" RELATED []
xref: CL:0000133
xref: ZFIN:ZDB-ANAT-070308-60
relationship: develops_from ZFA:0009137 ! ectodermal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009081
name: mesenchymal cell
namespace: zebrafish_anatomy
def: "A cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets." [CL:curator]
xref: CL:0000134
xref: ZFIN:ZDB-ANAT-070308-61
relationship: develops_from ZFA:0009138 ! mesodermal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009082
name: fat cell
namespace: zebrafish_anatomy
def: "A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of tryglycerides." [CL:curator]
synonym: "adipocyte" RELATED []
synonym: "lipocyte" RELATED []
xref: CL:0000136
xref: ZFIN:ZDB-ANAT-070308-62
relationship: develops_from ZFA:0009026 ! fibroblast
relationship: develops_from ZFA:0009081 ! mesenchymal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009083
name: osteocyte
namespace: zebrafish_anatomy
def: "A mature osteoblast that has become embedded in the bone matrix. They occupy a small cavity, called lacuna, in the matrix and are connected to adjacent osteocytes via protoplasmic projections called canaliculi." [CL:curator]
xref: CL:0000137
xref: ZFIN:ZDB-ANAT-070308-63
relationship: develops_from ZFA:0009031 ! osteoblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009084
name: chondrocyte
namespace: zebrafish_anatomy
def: "Polymorphic cell that form cartilage." [CL:curator]
xref: CL:0000138
xref: ZFIN:ZDB-ANAT-050915-154
is_a: ZFA:0009093 ! GAG secreting cell
is_a: ZFA:0009287 ! collagen secreting cell
relationship: develops_from ZFA:0009027 ! chondroblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009085
name: amelocyte
namespace: zebrafish_anatomy
xref: CL:0000139
xref: ZFIN:ZDB-ANAT-070308-64
is_a: ZFA:0009089 ! simple columnar epithelial cell
relationship: develops_from ZFA:0009028 ! ameloblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009086
name: odontocyte
namespace: zebrafish_anatomy
xref: CL:0000140
xref: ZFIN:ZDB-ANAT-070308-65
relationship: develops_from ZFA:0009029 ! odontoblast
relationship: develops_from ZFA:0009081 ! mesenchymal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009087
name: cementocyte
namespace: zebrafish_anatomy
xref: CL:0000141
xref: ZFIN:ZDB-ANAT-070308-66
relationship: develops_from ZFA:0009030 ! cementoblast
relationship: develops_from ZFA:0009081 ! mesenchymal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009088
name: professional antigen presenting cell
namespace: zebrafish_anatomy
def: "A cell capable of processing and presenting lipid and protein antigens to T cells in order to initiate an immune response." [ZFIN:ZDB-PUB-070221-3]
comment: Note change of name; nearly all somatic cells can present antigens to T cells via MHC Class I complexes leading to effector responses, but professional antigen presenting cells constituitively express MHC Class II as well as constimulatory molecules, and thus can initiate immune responses via T cells.
synonym: "APC" RELATED []
xref: CL:0000145
xref: ZFIN:ZDB-ANAT-070308-67
is_a: ZFA:0009309 ! leukocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009089
name: simple columnar epithelial cell
namespace: zebrafish_anatomy
xref: CL:0000146
xref: ZFIN:ZDB-ANAT-070308-68
is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009090
name: pigment cell
namespace: zebrafish_anatomy
alt_id: ZFA:0000057
synonym: "chromatocyte" RELATED []
synonym: "chromatophore" RELATED []
xref: CL:0000147
xref: ZFIN:ZDB-ANAT-010921-474
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000368 ! integument
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0009091
name: melanocyte
namespace: zebrafish_anatomy
alt_id: ZFA:0001091
def: "A pigment cell derived from the neural crest. Contains melanin-filled pigment granules, which gives a brown to black appearance." [CL:curator]
synonym: "melanophore" RELATED []
xref: CL:0000148
xref: ZFIN:ZDB-ANAT-040708-2
is_a: ZFA:0009090 ! pigment cell
relationship: develops_from ZFA:0009249 ! melanoblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0009092
name: exocrine cell
namespace: zebrafish_anatomy
def: "A cell of an exocrine gland, i.e. a gland that discharges its secretion via a duct." [ZFIN:ZDB-PUB-070221-5]
xref: CL:0000152
xref: ZFIN:ZDB-ANAT-070308-69
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009093
name: GAG secreting cell
namespace: zebrafish_anatomy
synonym: "hyaluronic acid secreting cell" RELATED []
xref: CL:0000153
xref: ZFIN:ZDB-ANAT-070308-70
is_a: ZFA:0009162 ! extracellular matrix secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009094
name: goblet cell
namespace: zebrafish_anatomy
def: "A cell of the epithelial lining that produce and secrete mucins." [CL:curator]
synonym: "chalice cell" RELATED []
xref: CL:0000160
xref: ZFIN:ZDB-ANAT-070308-71
is_a: ZFA:0009159 ! mucus secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009095
name: acid secreting cell
namespace: zebrafish_anatomy
xref: CL:0000161
xref: ZFIN:ZDB-ANAT-070308-72
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009096
name: endocrine cell
namespace: zebrafish_anatomy
def: "A cell of an endocrine gland, ductless glands that secrete substances which are released directly into the circulation and which influence metabolism and other body functions." [CL:curator]
xref: CL:0000163
xref: ZFIN:ZDB-ANAT-060816-68
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001158 ! endocrine system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009097
name: enteroendocrine cell
namespace: zebrafish_anatomy
xref: CL:0000164
xref: ZFIN:ZDB-ANAT-070308-73
is_a: ZFA:0009096 ! endocrine cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009098
name: neuroendocrine cell
namespace: zebrafish_anatomy
def: "A neuron that has the specialized function to produce and secrete hormones, and that constitutes, in whole or in part, an endocrine organ or system." [CL:curator]
synonym: "neurosecretory cell" RELATED []
xref: CL:0000165
xref: ZFIN:ZDB-ANAT-070308-74
is_a: ZFA:0009096 ! endocrine cell
is_a: ZFA:0009190 ! electrically responsive cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009099
name: chromaffin cell
namespace: zebrafish_anatomy
def: "A cell that stores epinephrine secretory vesicles. During times of stress, the nervous system signals the vesicles to secrete their hormonal content. Their name derives from their ability to stain a brownish color with chromic salts. Characteristically, they are located in the adrenal medulla and paraganglia of the sympathetic nervous system." [CL:curator]
synonym: "phaeochromocyte" RELATED []
xref: CL:0000166
xref: ZFIN:ZDB-ANAT-050915-151
is_a: ZFA:0009098 ! neuroendocrine cell
relationship: develops_from ZFA:0009165 ! neural crest cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009100
name: peptide hormone secreting cell
namespace: zebrafish_anatomy
xref: CL:0000167
xref: ZFIN:ZDB-ANAT-060816-69
is_a: ZFA:0009096 ! endocrine cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009101
name: insulin secreting cell
namespace: zebrafish_anatomy
xref: CL:0000168
xref: ZFIN:ZDB-ANAT-070308-75
is_a: ZFA:0009100 ! peptide hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009102
name: pancreatic B cell
namespace: zebrafish_anatomy
synonym: "beta cell" RELATED []
xref: CL:0000169
xref: ZFIN:ZDB-ANAT-070308-76
is_a: ZFA:0009101 ! insulin secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009103
name: glucagon secreting cell
namespace: zebrafish_anatomy
xref: CL:0000170
xref: ZFIN:ZDB-ANAT-070308-77
is_a: ZFA:0009100 ! peptide hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009104
name: pancreatic A cell
namespace: zebrafish_anatomy
synonym: "alpha cell" RELATED []
xref: CL:0000171
xref: ZFIN:ZDB-ANAT-070308-78
is_a: ZFA:0009103 ! glucagon secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009105
name: somatostatin secreting cell
namespace: zebrafish_anatomy
xref: CL:0000172
xref: ZFIN:ZDB-ANAT-070308-79
is_a: ZFA:0009100 ! peptide hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009106
name: steroid hormone secreting cell
namespace: zebrafish_anatomy
xref: CL:0000174
xref: ZFIN:ZDB-ANAT-070308-80
is_a: ZFA:0009096 ! endocrine cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009107
name: testosterone secreting cell
namespace: zebrafish_anatomy
xref: CL:0000177
xref: ZFIN:ZDB-ANAT-070308-81
is_a: ZFA:0009106 ! steroid hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009108
name: Leydig cell
namespace: zebrafish_anatomy
synonym: "interstitial cell" RELATED []
xref: CL:0000178
xref: ZFIN:ZDB-ANAT-070308-82
is_a: ZFA:0009107 ! testosterone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009109
name: progesterone secreting cell
namespace: zebrafish_anatomy
xref: CL:0000179
xref: ZFIN:ZDB-ANAT-070308-83
is_a: ZFA:0009106 ! steroid hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009110
name: estradiol secreting cell
namespace: zebrafish_anatomy
xref: CL:0000180
xref: ZFIN:ZDB-ANAT-070308-84
is_a: ZFA:0009106 ! steroid hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009111
name: hepatocyte
namespace: zebrafish_anatomy
def: "The main structural component of the liver. They are specialized epithelial cells that are organized into interconnected plates called lobules." [CL:curator]
xref: CL:0000182
xref: ZFIN:ZDB-ANAT-070308-85
is_a: ZFA:0009034 ! epithelial cell
relationship: develops_from ZFA:0009081 ! mesenchymal cell
relationship: develops_from ZFA:0009139 ! endodermal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009112
name: pericyte
namespace: zebrafish_anatomy
def: "A slender, contractile, mesenchymal-like cell found in close association with capillary walls. They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells. (From Stedman, 26th ed)." [CL:curator]
xref: CL:0000184
xref: ZFIN:ZDB-ANAT-070308-86
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009113
name: myoepithelial cell
namespace: zebrafish_anatomy
xref: CL:0000185
xref: ZFIN:ZDB-ANAT-070308-87
is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell
relationship: develops_from ZFA:0009138 ! mesodermal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009114
name: muscle cell
namespace: zebrafish_anatomy
def: "A mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle." [CL:curator]
synonym: "myocyte" RELATED []
xref: CL:0000187
xref: ZFIN:ZDB-ANAT-050915-158
is_a: ZFA:0009190 ! electrically responsive cell
relationship: develops_from ZFA:0009025 ! myoblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0009115
name: skeletal muscle cell
namespace: zebrafish_anatomy
synonym: "striated muscle cell" RELATED []
xref: CL:0000188
xref: ZFIN:ZDB-ANAT-050915-159
is_a: ZFA:0009114 ! muscle cell
relationship: develops_from ZFA:0009236 ! skeletal muscle myoblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0009116
name: slow muscle cell
namespace: zebrafish_anatomy
alt_id: ZFA:0001087
synonym: "red muscle cell" RELATED []
xref: CL:0000189
xref: ZFIN:ZDB-ANAT-031211-15
is_a: ZFA:0009115 ! skeletal muscle cell
relationship: develops_from ZFA:0001056 ! myotome
relationship: develops_from ZFA:0001373 ! migratory slow muscle precursor cell
relationship: develops_from ZFA:0009368 ! slow muscle myoblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0009117
name: fast muscle cell
namespace: zebrafish_anatomy
alt_id: ZFA:0001088
synonym: "white muscle cell" RELATED []
xref: CL:0000190
xref: ZFIN:ZDB-ANAT-031211-3
is_a: ZFA:0009115 ! skeletal muscle cell
relationship: develops_from ZFA:0001056 ! myotome
relationship: develops_from ZFA:0009369 ! fast muscle myoblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0009118
name: smooth muscle cell
namespace: zebrafish_anatomy
def: "A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast)." [CL:curator]
synonym: "non-striated muscle cell" RELATED []
xref: CL:0000192
xref: ZFIN:ZDB-ANAT-070308-88
is_a: ZFA:0009114 ! muscle cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009119
name: pain receptor cell
namespace: zebrafish_anatomy
def: "The peripheral receptor for pain. Includes receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli. All mammalian nociceptors are free nerve endings." [CL:curator]
synonym: "nociceptor" RELATED []
synonym: "nocireceptor" RELATED []
xref: CL:0000198
xref: ZFIN:ZDB-ANAT-070308-89
is_a: ZFA:0009001 ! receptor cell (sensu Animalia)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009120
name: mechanoreceptor cell
namespace: zebrafish_anatomy
def: "A cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system." [CL:curator]
xref: CL:0000199
xref: ZFIN:ZDB-ANAT-070308-90
is_a: ZFA:0009001 ! receptor cell (sensu Animalia)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009121
name: auditory receptor cell
namespace: zebrafish_anatomy
xref: CL:0000201
xref: ZFIN:ZDB-ANAT-070308-91
is_a: ZFA:0009001 ! receptor cell (sensu Animalia)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009122
name: auditory hair cell
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-512
is_obsolete: true
[Term]
id: ZFA:0009123
name: thermoreceptor cell
namespace: zebrafish_anatomy
def: "A cellular receptor which mediates the sense of temperature. Thermoreceptors in vertebrates are mostly located under the skin. In mammals there are separate types of thermoreceptors for cold and for warmth and pain receptor cells which detect cold or heat extreme enough to cause pain." [CL:curator]
xref: CL:0000205
xref: ZFIN:ZDB-ANAT-070308-92
is_a: ZFA:0009001 ! receptor cell (sensu Animalia)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009124
name: chemoreceptor cell
namespace: zebrafish_anatomy
def: "A cell specialized to detect chemical substances and relay that information centrally in the nervous system. Chemoreceptors may monitor external stimuli, as in taste and olfaction, or internal stimuli, such as the concentrations of oxygen and carbon dioxide in the blood." [CL:curator]
xref: CL:0000206
xref: ZFIN:ZDB-ANAT-070308-93
is_a: ZFA:0009001 ! receptor cell (sensu Animalia)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009125
name: olfactory receptor cell
namespace: zebrafish_anatomy
synonym: "olfactory receptor neuron" RELATED []
synonym: "olfactory sensory neuron" RELATED []
synonym: "Schultze's cell" RELATED []
xref: CL:0000207
xref: ZFIN:ZDB-ANAT-070308-94
is_a: ZFA:0009124 ! chemoreceptor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009126
name: taste receptor cell
namespace: zebrafish_anatomy
xref: CL:0000209
xref: ZFIN:ZDB-ANAT-070308-95
is_a: ZFA:0009124 ! chemoreceptor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009127
name: photoreceptor cell
namespace: zebrafish_anatomy
def: "A cell specialized to detect and transduce light." [CL:curator]
xref: CL:0000210
xref: ZFIN:ZDB-ANAT-070308-96
is_a: ZFA:0009001 ! receptor cell (sensu Animalia)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009128
name: electrically active cell
namespace: zebrafish_anatomy
def: "A cell whose function is determined by the generation or the reception of an electric signal." [CL:curator]
xref: CL:0000211
xref: ZFIN:ZDB-ANAT-070308-97
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009129
name: absorptive cell
namespace: zebrafish_anatomy
def: "A cell that takes up stuff and metabolises it." [CL:curator]
xref: CL:0000212
xref: ZFIN:ZDB-ANAT-070308-98
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009130
name: lining cell
namespace: zebrafish_anatomy
def: "A cell within an epithelial cell sheet whose main function is to act as an internal or external covering for a tissue or an organism." [CL:curator]
synonym: "boundary cell" RELATED []
xref: CL:0000213
xref: ZFIN:ZDB-ANAT-070308-99
is_a: ZFA:0009132 ! barrier cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009131
name: synovial cell
namespace: zebrafish_anatomy
xref: CL:0000214
xref: ZFIN:ZDB-ANAT-070308-100
is_a: ZFA:0009093 ! GAG secreting cell
is_a: ZFA:0009130 ! lining cell
relationship: develops_from ZFA:0009081 ! mesenchymal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009132
name: barrier cell
namespace: zebrafish_anatomy
def: "A cell whose primary function is to prevent the transport of stuff across compartments." [CL:curator]
xref: CL:0000215
xref: ZFIN:ZDB-ANAT-070308-101
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009133
name: Sertoli cell
namespace: zebrafish_anatomy
def: "A supporting cell projecting inward from the basement membrane of seminiferous tubules. They surround and nourish the developing male germ cells and secrete androgen binding protein. Their tight junctions with the spermatogonia and spermatocytes provide a blood-testis barrier." [CL:curator]
xref: CL:0000216
xref: ZFIN:ZDB-ANAT-070308-102
is_a: ZFA:0009132 ! barrier cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009134
name: insulating cell
namespace: zebrafish_anatomy
xref: CL:0000217
xref: ZFIN:ZDB-ANAT-070308-103
is_a: ZFA:0009132 ! barrier cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009135
name: Schwann cell
namespace: zebrafish_anatomy
def: "A neuroglial cell of the peripheral nervous system which forms the insulating myelin sheaths of peripheral axons." [CL:curator]
xref: CL:0000218
xref: ZFIN:ZDB-ANAT-070308-104
is_a: ZFA:0009134 ! insulating cell
is_a: ZFA:0009147 ! glial cell (sensu Vertebrata)
is_a: ZFA:0009163 ! myelin accumulating cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009136
name: motile cell
namespace: zebrafish_anatomy
def: "A cell that moves by its own activities." [CL:curator]
xref: CL:0000219
xref: ZFIN:ZDB-ANAT-070308-105
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009137
name: ectodermal cell
namespace: zebrafish_anatomy
def: "A cell of the outer of the three germ layers of the embryo." [CL:curator]
synonym: "ectoderm cell" RELATED []
xref: CL:0000221
xref: ZFIN:ZDB-ANAT-070308-106
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009138
name: mesodermal cell
namespace: zebrafish_anatomy
def: "A cell of the middle germ layer of the embryo." [CL:curator]
synonym: "mesoblast" RELATED []
synonym: "mesoderm cell" RELATED []
xref: CL:0000222
xref: ZFIN:ZDB-ANAT-070308-107
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009139
name: endodermal cell
namespace: zebrafish_anatomy
def: "A cell of the inner of the three germ layers of the embryo." [CL:curator]
synonym: "endoderm cell" RELATED []
xref: CL:0000223
xref: ZFIN:ZDB-ANAT-070308-108
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009140
name: phagocyte
namespace: zebrafish_anatomy
def: "Any cell capable of ingesting particulate matter via phagocytosis." [ZFIN:ZDB-PUB-070221-1]
xref: CL:0000234
xref: ZFIN:ZDB-ANAT-070308-109
is_a: ZFA:0009136 ! motile cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009141
name: macrophage
namespace: zebrafish_anatomy
def: "A mononuclear phagocyte which differentiates from monocytes, is typically resident in a particular tissue, and capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells." [CL:curator]
synonym: "histiocyte" RELATED []
xref: CL:0000235
xref: ZFIN:ZDB-ANAT-060331-85
is_a: ZFA:0009064 ! mononuclear phagocyte
is_a: ZFA:0009088 ! professional antigen presenting cell
relationship: develops_from ZFA:0009265 ! monocyte
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001159 ! immune system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0009142
name: B cell
namespace: zebrafish_anatomy
def: "A type of lymphocyte whose defining characteristic is the expression of an immunoglobulin complex." [ZFIN:ZDB-PUB-070221-3]
synonym: "B lymphocyte" RELATED []
synonym: "B-cell" RELATED []
synonym: "B-lymphocyte" RELATED []
xref: CL:0000236
xref: ZFIN:ZDB-ANAT-070308-110
is_a: ZFA:0009250 ! lymphocyte
relationship: develops_from ZFA:0009349 ! pro-B cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009143
name: brush border epithelial cell
namespace: zebrafish_anatomy
xref: CL:0000239
xref: ZFIN:ZDB-ANAT-070308-111
is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009144
name: stratified squamous epithelial cell
namespace: zebrafish_anatomy
xref: CL:0000240
xref: ZFIN:ZDB-ANAT-070308-112
is_a: ZFA:0009034 ! epithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009145
name: stratified cuboidal epithelial cell
namespace: zebrafish_anatomy
xref: CL:0000241
xref: ZFIN:ZDB-ANAT-070308-113
is_a: ZFA:0009034 ! epithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009146
name: Merkel cell
namespace: zebrafish_anatomy
def: "A modified epidermal cell located in the stratum basale. They are found mostly in areas where sensory perception is acute, such as the fingertips. Merkel cells are closely associated with an expanded terminal bulb of an afferent myelinated nerve fiber." [CL:curator]
xref: CL:0000242
xref: ZFIN:ZDB-ANAT-070308-114
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009147
name: glial cell (sensu Vertebrata)
namespace: zebrafish_anatomy
def: "A non-neuronal cells of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Form the myelin insulation of nervous pathways, guide neuronal migration during development, and exchange metabolites with neurons. Neuroglia have high-affinity transmitter uptake systems, voltage-dependent and transmitter-gated ion channels, and can release transmitters, but their role in signaling (as in many other functions) is unclear." [CL:curator]
xref: CL:0000243
xref: ZFIN:ZDB-ANAT-070308-115
is_a: ZFA:0009073 ! glial cell
relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009148
name: transitional epithelial cell
namespace: zebrafish_anatomy
xref: CL:0000244
xref: ZFIN:ZDB-ANAT-070308-116
is_a: ZFA:0009034 ! epithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009149
name: Mauthner neuron
namespace: zebrafish_anatomy
alt_id: ZFA:0000087
alt_id: ZFA:0000613
xref: CL:0000246
xref: ZFIN:ZDB-ANAT-010921-507
is_a: ZFA:0009051 ! interneuron
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: part_of ZFA:0001032 ! rhombomere 4
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0009150
name: Rohon-Beard neuron
namespace: zebrafish_anatomy
alt_id: ZFA:0000002
synonym: "RB neuron" RELATED []
synonym: "Rohon-Beard neurons" RELATED PLURAL []
xref: CL:0000247
xref: ZFIN:ZDB-ANAT-010921-407
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000038 ! Larval:Day 6
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0009151
name: hatching gland cell
namespace: zebrafish_anatomy
xref: CL:0000249
xref: ZFIN:ZDB-ANAT-070308-117
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009152
name: extramedullary cell
namespace: zebrafish_anatomy
xref: CL:0000251
xref: ZFIN:ZDB-ANAT-070308-118
is_a: ZFA:0009053 ! sensory neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009153
name: eurydendroid cell
namespace: zebrafish_anatomy
xref: CL:0000253
xref: ZFIN:ZDB-ANAT-070308-119
is_a: ZFA:0009239 ! efferent neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009154
name: eye photoreceptor cell
namespace: zebrafish_anatomy
xref: CL:0000287
xref: ZFIN:ZDB-ANAT-051116-42
is_a: ZFA:0009127 ! photoreceptor cell
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000143 ! retinal photoreceptor layer
relationship: part_of ZFA:0001464 ! retinal outer nuclear layer
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009155
name: somatotropin secreting cell
namespace: zebrafish_anatomy
def: "An acidophilic cell of the anterior pituitary that produces growth hormone, somatotropin." [CL:curator]
synonym: "growth hormone secreting cell" RELATED []
synonym: "somatotrope" RELATED []
synonym: "somatotroph" RELATED []
synonym: "somatotrophin secreting cell" RELATED []
synonym: "somatotropic cell" RELATED []
synonym: "somatrophic cell" RELATED []
xref: CL:0000295
xref: ZFIN:ZDB-ANAT-060816-74
is_a: ZFA:0009100 ! peptide hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009156
name: gamete
namespace: zebrafish_anatomy
xref: CL:0000300
xref: ZFIN:ZDB-ANAT-070308-120
is_a: ZFA:0009016 ! germ line cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009157
name: keratin accumulating cell
namespace: zebrafish_anatomy
xref: CL:0000311
xref: ZFIN:ZDB-ANAT-070308-121
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009158
name: keratinocyte
namespace: zebrafish_anatomy
def: "An epidermal cell which synthesizes keratin and undergoes a characteristic change as it move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin. Successive stages of differentiation of the keratinocytes forming the epidermal layers are basal cell, spinous or prickle cell, and the granular cell." [CL:curator]
xref: CL:0000312
xref: ZFIN:ZDB-ANAT-070308-122
is_a: ZFA:0009157 ! keratin accumulating cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009159
name: mucus secreting cell
namespace: zebrafish_anatomy
alt_id: ZFA:0000129
synonym: "mucous cell" RELATED []
xref: CL:0000319
xref: ZFIN:ZDB-ANAT-010921-556
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000368 ! integument
relationship: part_of ZFA:0001159 ! immune system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0009160
name: seminal fluid secreting cell
namespace: zebrafish_anatomy
xref: CL:0000321
xref: ZFIN:ZDB-ANAT-070308-123
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009161
name: metanephric mesenchyme stem cell
namespace: zebrafish_anatomy
xref: CL:0000324
xref: ZFIN:ZDB-ANAT-070308-124
is_a: ZFA:0009020 ! multi fate stem cell
relationship: develops_from ZFA:0009138 ! mesodermal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009162
name: extracellular matrix secreting cell
namespace: zebrafish_anatomy
xref: CL:0000327
xref: ZFIN:ZDB-ANAT-070308-125
is_a: ZFA:0009226 ! stromal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009163
name: myelin accumulating cell
namespace: zebrafish_anatomy
xref: CL:0000328
xref: ZFIN:ZDB-ANAT-070308-126
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009164
name: oxygen accumulating cell
namespace: zebrafish_anatomy
xref: CL:0000329
xref: ZFIN:ZDB-ANAT-070308-127
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009165
name: neural crest cell
namespace: zebrafish_anatomy
def: "A cell of the strip of specialized ectoderm flanking each side of the embryonal neural plate, which after the closure of the neural tube, forms a column of isolated cells along the dorsal aspect of the neural tube. Most of the cranial and all of the spinal sensory ganglion cells arise by differentiation of neural crest cells." [CL:curator]
xref: CL:0000333
xref: ZFIN:ZDB-ANAT-050915-149
is_a: ZFA:0009136 ! motile cell
relationship: develops_from ZFA:0009080 ! neurectodermal cell
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000045 ! neural crest
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0009166
name: mesenchyme condensation cell
namespace: zebrafish_anatomy
xref: CL:0000335
xref: ZFIN:ZDB-ANAT-070308-128
relationship: develops_from ZFA:0009081 ! mesenchymal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009167
name: adrenal medulla cell
namespace: zebrafish_anatomy
synonym: "chromafin cell" RELATED []
xref: CL:0000336
xref: ZFIN:ZDB-ANAT-070308-129
relationship: develops_from ZFA:0009004 ! trunk neural crest cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009168
name: neuroblast (sensu Vertebrata)
namespace: zebrafish_anatomy
synonym: "neuroblast" RELATED []
xref: CL:0000337
xref: ZFIN:ZDB-ANAT-070308-130
is_a: ZFA:0009011 ! neuroblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009169
name: glioblast (sensu Vertebrata)
namespace: zebrafish_anatomy
xref: CL:0000339
xref: ZFIN:ZDB-ANAT-070308-131
is_a: ZFA:0009010 ! glioblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009170
name: pigment cell (sensu Vertebrata)
namespace: zebrafish_anatomy
xref: CL:0000342
xref: ZFIN:ZDB-ANAT-070308-132
is_a: ZFA:0009090 ! pigment cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009171
name: visual pigment cell (sensu Vertebrata)
namespace: zebrafish_anatomy
xref: CL:0000343
xref: ZFIN:ZDB-ANAT-070308-133
is_a: ZFA:0009170 ! pigment cell (sensu Vertebrata)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009172
name: non-visual cell (sensu Vertebrata)
namespace: zebrafish_anatomy
xref: CL:0000344
xref: ZFIN:ZDB-ANAT-070308-134
is_a: ZFA:0009170 ! pigment cell (sensu Vertebrata)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009173
name: dental papilla cell
namespace: zebrafish_anatomy
xref: CL:0000345
xref: ZFIN:ZDB-ANAT-070308-135
relationship: develops_from ZFA:0009003 ! cranial neural crest cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009174
name: scleral cell
namespace: zebrafish_anatomy
xref: CL:0000347
xref: ZFIN:ZDB-ANAT-070308-136
relationship: develops_from ZFA:0009003 ! cranial neural crest cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009175
name: choroidal cell
namespace: zebrafish_anatomy
xref: CL:0000348
xref: ZFIN:ZDB-ANAT-070308-137
relationship: develops_from ZFA:0009003 ! cranial neural crest cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009176
name: extraembryonic cell
namespace: zebrafish_anatomy
xref: CL:0000349
xref: ZFIN:ZDB-ANAT-070308-138
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009177
name: blastoderm cell
namespace: zebrafish_anatomy
def: "An undifferentiated cell produced by early cleavages of the fertilized egg (zygote)." [CL:curator]
synonym: "blastomere" RELATED []
xref: CL:0000353
xref: ZFIN:ZDB-ANAT-070308-139
is_a: ZFA:0009002 ! early embryonic cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009178
name: blastemal cell
namespace: zebrafish_anatomy
xref: CL:0000354
xref: ZFIN:ZDB-ANAT-070308-140
is_a: ZFA:0009020 ! multi fate stem cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009179
name: muscle stem cell
namespace: zebrafish_anatomy
xref: CL:0000355
xref: ZFIN:ZDB-ANAT-050915-156
is_a: ZFA:0009013 ! single fate stem cell
is_a: ZFA:0009291 ! muscle precursor cell
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0009180
name: stratified epithelial stem cell
namespace: zebrafish_anatomy
xref: CL:0000357
xref: ZFIN:ZDB-ANAT-070308-141
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009181
name: vascular associated smooth muscle cell
namespace: zebrafish_anatomy
xref: CL:0000359
xref: ZFIN:ZDB-ANAT-070308-142
is_a: ZFA:0009118 ! smooth muscle cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009182
name: gastrula cell
namespace: zebrafish_anatomy
def: "A cell of the embryo in the early stage following the blastula, characterized by morphogenetic cell movements, cell differentiation, and the formation of the three germ layers." [CL:curator]
xref: CL:0000361
xref: ZFIN:ZDB-ANAT-070308-143
is_a: ZFA:0009002 ! early embryonic cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009183
name: epidermal cell
namespace: zebrafish_anatomy
def: "A cell found in the outermost layer of the organism." [CL:curator]
xref: CL:0000362
xref: ZFIN:ZDB-ANAT-060816-78
is_a: ZFA:0009039 ! squamous epithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009184
name: osteoprogenitor cell
namespace: zebrafish_anatomy
xref: CL:0000375
xref: ZFIN:ZDB-ANAT-070308-144
is_a: ZFA:0009013 ! single fate stem cell
relationship: develops_from ZFA:0009166 ! mesenchyme condensation cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009185
name: sensory processing neuron
namespace: zebrafish_anatomy
xref: CL:0000379
xref: ZFIN:ZDB-ANAT-070308-145
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009186
name: neurosecretory neuron
namespace: zebrafish_anatomy
xref: CL:0000381
xref: ZFIN:ZDB-ANAT-070308-146
is_a: ZFA:0009239 ! efferent neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009187
name: nephrogenic mesenchyme stem cell
namespace: zebrafish_anatomy
xref: CL:0000383
xref: ZFIN:ZDB-ANAT-070308-147
is_a: ZFA:0009020 ! multi fate stem cell
relationship: develops_from ZFA:0009081 ! mesenchymal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009188
name: ligament cell
namespace: zebrafish_anatomy
xref: CL:0000384
xref: ZFIN:ZDB-ANAT-070308-148
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009189
name: tendon cell
namespace: zebrafish_anatomy
synonym: "muscle attachment cell" RELATED []
xref: CL:0000388
xref: ZFIN:ZDB-ANAT-070308-149
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009190
name: electrically responsive cell
namespace: zebrafish_anatomy
def: "A cell whose function is determined by its response to an electric signal." [CL:curator]
xref: CL:0000393
xref: ZFIN:ZDB-ANAT-070308-150
is_a: ZFA:0009128 ! electrically active cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009191
name: CNS interneuron
namespace: zebrafish_anatomy
xref: CL:0000402
xref: ZFIN:ZDB-ANAT-070308-151
is_a: ZFA:0009051 ! interneuron
is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009192
name: serotinergic neuron
namespace: zebrafish_anatomy
xref: CL:0000403
xref: ZFIN:ZDB-ANAT-070308-152
is_a: ZFA:0009059 ! autonomic neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009193
name: electrically signaling cell
namespace: zebrafish_anatomy
def: "A cell that initiates an electrical signal and passes that signal to another cell." [CL:curator]
xref: CL:0000404
xref: ZFIN:ZDB-ANAT-070308-153
is_a: ZFA:0009128 ! electrically active cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009194
name: CNS short range interneuron
namespace: zebrafish_anatomy
xref: CL:0000406
xref: ZFIN:ZDB-ANAT-070308-154
is_a: ZFA:0009191 ! CNS interneuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009195
name: CNS long range interneuron
namespace: zebrafish_anatomy
xref: CL:0000410
xref: ZFIN:ZDB-ANAT-070308-155
is_a: ZFA:0009191 ! CNS interneuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009196
name: hypodermal cell
namespace: zebrafish_anatomy
xref: CL:0000411
xref: ZFIN:ZDB-ANAT-070308-156
is_a: ZFA:0009039 ! squamous epithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009197
name: yolk cell
namespace: zebrafish_anatomy
xref: CL:0000428
xref: ZFIN:ZDB-ANAT-070308-157
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009198
name: xanthophore
namespace: zebrafish_anatomy
alt_id: ZFA:0001092
def: "A pigment cell derived from the neural crest. Contains cartenoid pigments in structures called pterinosomes or xanthosomes. This gives an appearance ranging from a golden yellow to orange and red." [CL:curator]
xref: CL:0000430
xref: ZFIN:ZDB-ANAT-040708-3
is_a: ZFA:0009090 ! pigment cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0009199
name: iridophore
namespace: zebrafish_anatomy
alt_id: ZFA:0001090
def: "A pigment cell derived from the neural crest. The cell contains flat light-reflecting platelets, probably of guanine, in stacks called reflecting platets or iridisomes. The color-generating components produce a silver, gold, or iridescent color." [CL:curator]
xref: CL:0000431
xref: ZFIN:ZDB-ANAT-040708-1
is_a: ZFA:0009090 ! pigment cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0009200
name: reticular cell
namespace: zebrafish_anatomy
xref: CL:0000432
xref: ZFIN:ZDB-ANAT-070308-158
is_a: ZFA:0009026 ! fibroblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009201
name: alkali secreting cell
namespace: zebrafish_anatomy
xref: CL:0000435
xref: ZFIN:ZDB-ANAT-070308-159
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009202
name: follicle stimulating hormone secreting cell
namespace: zebrafish_anatomy
synonym: "delta basophil" RELATED []
synonym: "gonadotroph" RELATED []
xref: CL:0000437
xref: ZFIN:ZDB-ANAT-070308-160
is_a: ZFA:0009100 ! peptide hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009203
name: luteinizing hormone secreting cell
namespace: zebrafish_anatomy
synonym: "delta basophila" RELATED []
synonym: "gonadotroph" RELATED []
xref: CL:0000438
xref: ZFIN:ZDB-ANAT-060816-75
is_a: ZFA:0009100 ! peptide hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009204
name: prolactin secreting cell
namespace: zebrafish_anatomy
def: "An acidophilic cell of the anterior pituitary that produces prolactin." [CL:curator]
synonym: "epsilon-acidophil" RELATED []
synonym: "lactotrope" RELATED []
synonym: "lactotroph" RELATED []
synonym: "lactotropic cell" RELATED []
synonym: "mammotrope" RELATED []
synonym: "mammotroph" RELATED []
synonym: "mammotrophic cell" RELATED []
synonym: "mammotropic cell" RELATED []
xref: CL:0000439
xref: ZFIN:ZDB-ANAT-060816-70
is_a: ZFA:0009100 ! peptide hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009205
name: melanocyte stimulating hormone secreting cell
namespace: zebrafish_anatomy
def: "A cell of the intermediate pituitary that produces melanocyte stimulating hormone." [CL:curator]
synonym: "melanotrope" RELATED []
synonym: "melanotroph" RELATED []
xref: CL:0000440
xref: ZFIN:ZDB-ANAT-060816-72
is_a: ZFA:0009100 ! peptide hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009206
name: calcitonin secreting cell
namespace: zebrafish_anatomy
xref: CL:0000443
xref: ZFIN:ZDB-ANAT-070308-161
is_a: ZFA:0009100 ! peptide hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009207
name: parathyroid hormone secreting cell
namespace: zebrafish_anatomy
synonym: "chief cell" RELATED []
xref: CL:0000446
xref: ZFIN:ZDB-ANAT-070308-162
is_a: ZFA:0009100 ! peptide hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009208
name: lipocyte
namespace: zebrafish_anatomy
xref: CL:0000450
xref: ZFIN:ZDB-ANAT-070308-163
is_a: ZFA:0009082 ! fat cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009209
name: dendritic cell
namespace: zebrafish_anatomy
def: "A cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation." [ZFIN:ZDB-PUB-070221-3]
synonym: "interdigitating cell" RELATED []
synonym: "veiled cell" RELATED []
xref: CL:0000451
xref: ZFIN:ZDB-ANAT-070308-164
is_a: ZFA:0009088 ! professional antigen presenting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009210
name: thyroid hormone secreting cell
namespace: zebrafish_anatomy
xref: CL:0000452
xref: ZFIN:ZDB-ANAT-070308-165
is_a: ZFA:0009096 ! endocrine cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009211
name: epinephrin secreting cell
namespace: zebrafish_anatomy
xref: CL:0000454
xref: ZFIN:ZDB-ANAT-070308-166
is_a: ZFA:0009212 ! biogenic amine secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009212
name: biogenic amine secreting cell
namespace: zebrafish_anatomy
xref: CL:0000457
xref: ZFIN:ZDB-ANAT-070308-167
is_a: ZFA:0009096 ! endocrine cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009213
name: serotin secreting cell
namespace: zebrafish_anatomy
xref: CL:0000458
xref: ZFIN:ZDB-ANAT-070308-168
is_a: ZFA:0009212 ! biogenic amine secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009214
name: norepinephrin secreting cell
namespace: zebrafish_anatomy
xref: CL:0000459
xref: ZFIN:ZDB-ANAT-070308-169
is_a: ZFA:0009212 ! biogenic amine secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009215
name: glucocorticoid secreting cell
namespace: zebrafish_anatomy
xref: CL:0000460
xref: ZFIN:ZDB-ANAT-070308-170
is_a: ZFA:0009106 ! steroid hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009216
name: adrenocorticotropic hormone secreting cell
namespace: zebrafish_anatomy
def: "A basophil cell of the anterior pituitary that produces adrenocorticotropic hormone, or corticotropin." [CL:curator]
synonym: "adrenocorticotrophic hormone secreting cell" RELATED []
synonym: "corticotrope" RELATED []
synonym: "corticotroph" RELATED []
synonym: "corticotrophin hormone secreting cell" RELATED []
synonym: "corticotropin hormone secreting cell" RELATED []
xref: CL:0000467
xref: ZFIN:ZDB-ANAT-060816-71
is_a: ZFA:0009100 ! peptide hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009217
name: digestive enzyme secreting cell
namespace: zebrafish_anatomy
xref: CL:0000470
xref: ZFIN:ZDB-ANAT-070308-171
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009218
name: thyroid stimulating hormone secreting cell
namespace: zebrafish_anatomy
def: "A basophil cell of the anterior pituitary that produces thyroid stimulating hormone, thyrotrophin." [CL:curator]
synonym: "beta-basophil" RELATED []
synonym: "thyrotrope" RELATED []
synonym: "thyrotroph" RELATED []
xref: CL:0000476
xref: ZFIN:ZDB-ANAT-060816-73
is_a: ZFA:0009100 ! peptide hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009219
name: visible light photoreceptor cell
namespace: zebrafish_anatomy
xref: CL:0000488
xref: ZFIN:ZDB-ANAT-070308-172
is_a: ZFA:0009127 ! photoreceptor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009220
name: photopic photoreceptor cell
namespace: zebrafish_anatomy
xref: CL:0000490
xref: ZFIN:ZDB-ANAT-070308-173
is_a: ZFA:0009219 ! visible light photoreceptor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009221
name: UV sensitive photoreceptor cell
namespace: zebrafish_anatomy
xref: CL:0000494
xref: ZFIN:ZDB-ANAT-070308-174
is_a: ZFA:0009127 ! photoreceptor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009222
name: blue sensitive photoreceptor cell
namespace: zebrafish_anatomy
xref: CL:0000495
xref: ZFIN:ZDB-ANAT-070308-175
is_a: ZFA:0009220 ! photopic photoreceptor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009223
name: green sensitive photoreceptor cell
namespace: zebrafish_anatomy
xref: CL:0000496
xref: ZFIN:ZDB-ANAT-070308-176
is_a: ZFA:0009220 ! photopic photoreceptor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009224
name: red sensitive photoreceptor cell
namespace: zebrafish_anatomy
xref: CL:0000497
xref: ZFIN:ZDB-ANAT-070308-177
is_a: ZFA:0009220 ! photopic photoreceptor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009225
name: inhibitory interneuron
namespace: zebrafish_anatomy
xref: CL:0000498
xref: ZFIN:ZDB-ANAT-070308-178
is_a: ZFA:0009051 ! interneuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009226
name: stromal cell
namespace: zebrafish_anatomy
def: "A connective tissue cell of an organ found in the loose connective tissue. These are most often associated with the uterine mucosa and the ovary as well as the hematopoietic system and elsewhere." [CL:curator]
xref: CL:0000499
xref: ZFIN:ZDB-ANAT-070308-179
relationship: develops_from ZFA:0009081 ! mesenchymal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009227
name: granulosa cell
namespace: zebrafish_anatomy
def: "A supporting cell for the developing female gamete in the ovary of mammals. They develop from the coelomic epithelial cells of the gonadal ridge. Granulosa cells form a single layer around the mammalian oocyte in the primordial ovarian follicle and advance to form a multilayered cumulus oophorus surrounding the ovum in the Graafian follicle. The major functions of granulosa cells include the production of steroids and LH receptors." [CL:curator]
xref: CL:0000501
xref: ZFIN:ZDB-ANAT-070308-180
is_a: ZFA:0009106 ! steroid hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009228
name: D cell
namespace: zebrafish_anatomy
def: "A cell found throughout the gastrointestinal tract and in the pancreas. They secrete somatostatin in both an endocrine and paracrine manner. Somatostatin inhibits gastrin, cholecystokinin, insulin, glucagon, pancreatic enzymes, and gastric hydrochloric acid. A variety of substances which inhibit gastric acid secretion (vasoactive intestinal peptide, calcitonin gene-related peptide, cholecystokinin, beta-adrenergic agonists, and gastric inhibitory peptide) are thought to act by releasing somatostatin." [CL:curator]
xref: CL:0000502
xref: ZFIN:ZDB-ANAT-070308-181
is_a: ZFA:0009097 ! enteroendocrine cell
is_a: ZFA:0009105 ! somatostatin secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009229
name: theca cell
namespace: zebrafish_anatomy
def: "A flattened stroma cell forming a sheath or theca outside the basal lamina lining the mature ovarian follicle. Thecal interstitial or stromal cells are steroidogenic, and produce primarily androgens which serve as precusors of estrogens in the granulosa cells." [CL:curator]
xref: CL:0000503
xref: ZFIN:ZDB-ANAT-070308-182
is_a: ZFA:0009226 ! stromal cell
is_a: ZFA:0009271 ! androgen secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009230
name: substance P secreting cell
namespace: zebrafish_anatomy
xref: CL:0000505
xref: ZFIN:ZDB-ANAT-070308-183
is_a: ZFA:0009100 ! peptide hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009231
name: enkephalin secreting cell
namespace: zebrafish_anatomy
xref: CL:0000506
xref: ZFIN:ZDB-ANAT-070308-184
is_a: ZFA:0009232 ! endorphin secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009232
name: endorphin secreting cell
namespace: zebrafish_anatomy
xref: CL:0000507
xref: ZFIN:ZDB-ANAT-070308-185
is_a: ZFA:0009100 ! peptide hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009233
name: paracrine cell
namespace: zebrafish_anatomy
xref: CL:0000512
xref: ZFIN:ZDB-ANAT-070308-186
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009234
name: cardiac muscle myoblast
namespace: zebrafish_anatomy
def: "A precursor cell destined to differentiate into cardiac myocytes." [CL:curator]
synonym: "cardioblast" RELATED []
xref: CL:0000513
xref: ZFIN:ZDB-ANAT-070308-187
is_a: ZFA:0009025 ! myoblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009235
name: smooth muscle myoblast
namespace: zebrafish_anatomy
def: "A precursor cell destined to differentiate into smooth muscle myocytes." [CL:curator]
synonym: "satellite cell" RELATED []
xref: CL:0000514
xref: ZFIN:ZDB-ANAT-070308-188
is_a: ZFA:0009025 ! myoblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009236
name: skeletal muscle myoblast
namespace: zebrafish_anatomy
def: "A myoblast that differentiates into skeletal muscle fibers." [CL:curator]
xref: CL:0000515
xref: ZFIN:ZDB-ANAT-070308-189
is_a: ZFA:0009025 ! myoblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009237
name: perineuronal satellite cell
namespace: zebrafish_anatomy
def: "A non-neuronal cell that surrounds the neuronal cell bodies of the ganglia." [CL:curator]
synonym: "perineural satellite cell" RELATED []
xref: CL:0000516
xref: ZFIN:ZDB-ANAT-070308-190
is_a: ZFA:0009147 ! glial cell (sensu Vertebrata)
relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009238
name: afferent neuron
namespace: zebrafish_anatomy
def: "A neuron which conveys sensory information centrally from the periphery." [CL:curator]
synonym: "input neuron" RELATED []
xref: CL:0000526
xref: ZFIN:ZDB-ANAT-070308-191
is_a: ZFA:0009009 ! neuron neural crest derived
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009239
name: efferent neuron
namespace: zebrafish_anatomy
def: "A neuron which sends impulses peripherally to activate muscles or secretory cells." [CL:curator]
synonym: "output neuron" RELATED []
xref: CL:0000527
xref: ZFIN:ZDB-ANAT-070308-192
is_a: ZFA:0009009 ! neuron neural crest derived
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009240
name: nitrergic neuron
namespace: zebrafish_anatomy
def: "A nerve cell where transmission is mediated by nitric oxide." [CL:curator]
xref: CL:0000528
xref: ZFIN:ZDB-ANAT-070308-193
is_a: ZFA:0009059 ! autonomic neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009241
name: pigmented epithelial cell
namespace: zebrafish_anatomy
xref: CL:0000529
xref: ZFIN:ZDB-ANAT-070308-194
is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell
relationship: develops_from ZFA:0009306 ! neuroepithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009242
name: primary neuron
namespace: zebrafish_anatomy
alt_id: ZFA:0000055
xref: CL:0000530
xref: ZFIN:ZDB-ANAT-010921-472
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000038 ! Larval:Day 6
relationship: part_of ZFA:0001120 ! neuroectoderm
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0009243
name: CAP motoneuron
namespace: zebrafish_anatomy
xref: CL:0000532
xref: ZFIN:ZDB-ANAT-070308-195
is_a: ZFA:0009244 ! primary motor neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009244
name: primary motor neuron
namespace: zebrafish_anatomy
alt_id: ZFA:0000572
synonym: "primary motoneuron" RELATED []
xref: CL:0000533
xref: ZFIN:ZDB-ANAT-011113-498
is_a: ZFA:0009052 ! motor neuron
is_a: ZFA:0009242 ! primary neuron
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0009245
name: primary interneuron
namespace: zebrafish_anatomy
alt_id: ZFA:0000945
xref: CL:0000534
xref: ZFIN:ZDB-ANAT-020309-308
is_a: ZFA:0009051 ! interneuron
is_a: ZFA:0009242 ! primary neuron
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0009246
name: secondary neuron
namespace: zebrafish_anatomy
xref: CL:0000535
xref: ZFIN:ZDB-ANAT-070308-196
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009247
name: secondary motor neuron
namespace: zebrafish_anatomy
alt_id: ZFA:0000584
synonym: "secondary motoneuron" RELATED []
xref: CL:0000536
xref: ZFIN:ZDB-ANAT-011113-511
is_a: ZFA:0009052 ! motor neuron
is_a: ZFA:0009246 ! secondary neuron
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0009248
name: neuron
namespace: zebrafish_anatomy
alt_id: ZFA:0000134
def: "The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system." [CL:curator]
xref: CL:0000540
xref: ZFIN:ZDB-ANAT-010921-563
is_a: ZFA:0009190 ! electrically responsive cell
is_a: ZFA:0009193 ! electrically signaling cell
relationship: develops_from ZFA:0009011 ! neuroblast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000396 ! nervous system
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0009249
name: melanoblast
namespace: zebrafish_anatomy
def: "A cell that originates from the neural crest and differentiates into a pigment cell." [CL:curator]
xref: CL:0000541
xref: ZFIN:ZDB-ANAT-050915-150
relationship: develops_from ZFA:0009165 ! neural crest cell
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0009250
name: lymphocyte
namespace: zebrafish_anatomy
def: "A cell of the B cell, T cell, or natural killer cell lineage." [ZFIN:ZDB-PUB-070221-3]
xref: CL:0000542
xref: ZFIN:ZDB-ANAT-070308-197
is_a: ZFA:0009357 ! mononuclear cell
relationship: develops_from ZFA:0009023 ! common lymphocyte progenitor
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009251
name: granulocyte monocyte progenitor cell
namespace: zebrafish_anatomy
def: "A progenitor cell committed to the granulocyte and monocyte lineages. http://www.copewithcytokines.de" [ZFIN:ZDB-PUB-070221-1]
synonym: "CFU-C , Colony forming unit in culture" RELATED []
synonym: "CFU-GM" RELATED [ZFIN:ZDB-PUB-070221-1]
synonym: "colony forming unit granulocyte macrophage" RELATED [ZFIN:ZDB-PUB-070221-1]
synonym: "GMP" RELATED [ZFIN:ZDB-PUB-070221-1]
synonym: "granulocyte-macrophage progenitor" RELATED [ZFIN:ZDB-PUB-070221-1]
synonym: "myeloid progenitor cell" RELATED []
xref: CL:0000557
xref: ZFIN:ZDB-ANAT-060331-74
is_a: ZFA:0009356 ! myeloid progenitor cell
relationship: develops_from ZFA:0009021 ! common myeloid progenitor
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009252
name: reticulocyte
namespace: zebrafish_anatomy
def: "An immature erythrocyte showing a basophilic reticulum under vital staining." [ZFIN:ZDB-PUB-070221-1]
xref: CL:0000558
xref: ZFIN:ZDB-ANAT-070308-198
is_a: ZFA:0009044 ! blood cell
is_a: ZFA:0009325 ! erythroid lineage cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009253
name: promonocyte
namespace: zebrafish_anatomy
def: "A precursor in the monocytic series, being a cell intermediate in development between the monoblast and monocyte." [ZFIN:ZDB-PUB-070221-1]
xref: CL:0000559
xref: ZFIN:ZDB-ANAT-070308-199
is_a: ZFA:0009356 ! myeloid progenitor cell
relationship: develops_from ZFA:0009017 ! monoblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009254
name: band form neutrophil
namespace: zebrafish_anatomy
def: "A late neutrophilic metamyelocyte in which the nucleus is in the form of a curved or coiled band, not having acquired the typical multilobar shape of the mature neutrophil." [ZFIN:ZDB-PUB-070221-1]
synonym: "band" RELATED []
synonym: "band cell" RELATED []
synonym: "band form" RELATED []
synonym: "rod neutrophil" RELATED []
synonym: "stab cell" RELATED []
xref: CL:0000560
xref: ZFIN:ZDB-ANAT-060331-80
is_a: ZFA:0009328 ! immature neutrophil
relationship: develops_from ZFA:0009268 ! neutrophilic metamyelocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009255
name: amacrine cell
namespace: zebrafish_anatomy
def: "Interneuron of the vertebrate retina. They integrate, modulate, and interpose a temporal domain in the visual message presented to the retinal ganglion cells, with which they synapse in the inner plexiform layer." [CL:curator]
synonym: "amacrine neuron" RELATED []
xref: CL:0000561
xref: ZFIN:ZDB-ANAT-051116-41
is_a: ZFA:0009051 ! interneuron
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000119 ! retinal inner nuclear layer
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009256
name: nucleate erythrocyte
namespace: zebrafish_anatomy
def: "An erythrocyte having a nucleus." [CL:curator]
synonym: "RBC" RELATED []
synonym: "red blood cell" RELATED []
xref: CL:0000562
xref: ZFIN:ZDB-ANAT-070308-200
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009257
name: neutrophilic promyelocyte
namespace: zebrafish_anatomy
def: "A neutrophil precursor in the granulocytic series, being a cell intermediate in development between a myeloblast and myelocyte, and containing a few, as yet undifferentiated, cytoplasmic granules." [ZFIN:ZDB-PUB-070221-1]
synonym: "neutrophilic premyelocyte" RELATED []
synonym: "neutrophilic progranulocyte" RELATED []
synonym: "promyelocyte" RELATED []
xref: CL:0000564
xref: ZFIN:ZDB-ANAT-060331-77
relationship: develops_from ZFA:0009018 ! neutrophilic myeloblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009258
name: angioblastic mesenchymal cell
namespace: zebrafish_anatomy
synonym: "angioblast" RELATED []
xref: CL:0000566
xref: ZFIN:ZDB-ANAT-070308-201
is_a: ZFA:0009020 ! multi fate stem cell
relationship: develops_from ZFA:0009081 ! mesenchymal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009259
name: cardiac mesenchymal cell
namespace: zebrafish_anatomy
xref: CL:0000569
xref: ZFIN:ZDB-ANAT-070308-202
relationship: develops_from ZFA:0009004 ! trunk neural crest cell
relationship: develops_from ZFA:0009081 ! mesenchymal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009260
name: parafollicular cell
namespace: zebrafish_anatomy
synonym: "C cell" RELATED []
xref: CL:0000570
xref: ZFIN:ZDB-ANAT-070308-203
relationship: develops_from ZFA:0009165 ! neural crest cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009261
name: leucophore
namespace: zebrafish_anatomy
def: "A pigment cell derived from the neural crest. Contains uric acid or other purine crystals deposited in stacks called leucosomes. The crystals reflect light and this gives a white appearance under white light." [CL:curator]
xref: CL:0000571
xref: ZFIN:ZDB-ANAT-070308-204
is_a: ZFA:0009090 ! pigment cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009262
name: retinal cone cell
namespace: zebrafish_anatomy
def: "One of the two photoreceptor cell types in the vertebrate retina. In cones the photopigment is in invaginations of the cell membrane of the outer segment. Cones are less sensitive to light than rods, but they provide vision with higher spatial and temporal acuity, and the combination of signals from cones with different pigments allows color vision." [CL:curator]
xref: CL:0000573
xref: ZFIN:ZDB-ANAT-051116-43
is_a: ZFA:0009154 ! eye photoreceptor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009263
name: erythrophore
namespace: zebrafish_anatomy
def: "A pigment cell derived from the neural crest. Contains pteridine and/or carotenoid pigments in structures called pterinosomes or erythrosomes. This gives an orange to red appearance." [CL:curator]
xref: CL:0000574
xref: ZFIN:ZDB-ANAT-070308-205
is_a: ZFA:0009090 ! pigment cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009264
name: corneal epithelial cell
namespace: zebrafish_anatomy
xref: CL:0000575
xref: ZFIN:ZDB-ANAT-070308-206
is_a: ZFA:0009039 ! squamous epithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009265
name: monocyte
namespace: zebrafish_anatomy
def: "Large, phagocytic mononuclear leukocytes produced in the vertebrate bone marrow and released into the blood." [CL:curator]
xref: CL:0000576
xref: ZFIN:ZDB-ANAT-070308-207
is_a: ZFA:0009064 ! mononuclear phagocyte
is_a: ZFA:0009088 ! professional antigen presenting cell
relationship: develops_from ZFA:0009253 ! promonocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009266
name: neutrophilic myelocyte
namespace: zebrafish_anatomy
def: "A neutrophil precursor in the granulocytic series, being a cell intermediate in development between a promyelocyte and a metamyelocyte; in this stage, differentiation of cytoplasmic granules has begun." [ZFIN:ZDB-PUB-070221-1]
xref: CL:0000580
xref: ZFIN:ZDB-ANAT-060331-78
is_a: ZFA:0009328 ! immature neutrophil
relationship: develops_from ZFA:0009257 ! neutrophilic promyelocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009267
name: peritoneal macrophage
namespace: zebrafish_anatomy
def: "A mononuclear phagocyte that develops from bone marrow precursors but is resident in the peritoneum." [CL:curator]
xref: CL:0000581
xref: ZFIN:ZDB-ANAT-070308-208
is_a: ZFA:0009141 ! macrophage
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009268
name: neutrophilic metamyelocyte
namespace: zebrafish_anatomy
def: "A neutrophil precursor in the granulocytic series, being a cell intermediate in development between a meylocyte and the band form neutrophil. The protein synthesis seen in earlier stages decreases or stops; the nucleus becomes indented and its chromatin becomes coarse and clumped; and the cytoplasm becomes pink like that of a mature granulocyte." [ZFIN:ZDB-PUB-070221-1]
synonym: "juvenile neutrophil" RELATED []
synonym: "metamyelocyte" RELATED []
xref: CL:0000582
xref: ZFIN:ZDB-ANAT-060331-79
is_a: ZFA:0009328 ! immature neutrophil
relationship: develops_from ZFA:0009266 ! neutrophilic myelocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009269
name: enterocyte
namespace: zebrafish_anatomy
xref: CL:0000584
xref: ZFIN:ZDB-ANAT-070308-209
is_a: ZFA:0009143 ! brush border epithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009270
name: odontoclast
namespace: zebrafish_anatomy
def: "A specialized phagocytic cell associated with the absorption and removal of cementum." [CL:curator]
xref: CL:0000588
xref: ZFIN:ZDB-ANAT-070308-210
is_a: ZFA:0009047 ! osteoclast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009271
name: androgen secreting cell
namespace: zebrafish_anatomy
xref: CL:0000593
xref: ZFIN:ZDB-ANAT-070308-211
is_a: ZFA:0009106 ! steroid hormone secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009272
name: skeletal muscle satellite cell
namespace: zebrafish_anatomy
def: "An elongated, spindle-shaped, quiescent myoblast lying in close contact with adult skeletal muscle. They are thought to play a role in muscle repair and regeneration." [CL:curator]
xref: CL:0000594
xref: ZFIN:ZDB-ANAT-070308-212
is_a: ZFA:0009236 ! skeletal muscle myoblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009273
name: pyramidal cell
namespace: zebrafish_anatomy
def: "A projection neuron in the cerebral cortex and the hippocampus. Pyramidal cells have a pyramid-shaped soma with the apex and an apical dendrite pointed toward the pial surface and other dendrites and an axon emerging from the base. The axons may have local collaterals but also project outside their cortical region." [CL:curator]
xref: CL:0000598
xref: ZFIN:ZDB-ANAT-070308-213
is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009274
name: pressoreceptor cell
namespace: zebrafish_anatomy
def: "A receptor in the vascular system, particularly the aorta and carotid sinus, which is sensitive to stretch of the vessel walls." [CL:curator]
xref: CL:0000602
xref: ZFIN:ZDB-ANAT-070308-214
is_a: ZFA:0009370 ! stretch receptor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009275
name: retinal rod cell
namespace: zebrafish_anatomy
def: "One of the two photoreceptor cell types of the vertebrate retina. In rods the photopigment is in stacks of membranous disks separate from the outer cell membrane. Rods are more sensitive to light than cones, but rod mediated vision has less spatial and temporal resolution than cone vision." [CL:curator]
xref: CL:0000604
xref: ZFIN:ZDB-ANAT-051116-44
is_a: ZFA:0009154 ! eye photoreceptor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009276
name: GABAergic neuron
namespace: zebrafish_anatomy
xref: CL:0000617
xref: ZFIN:ZDB-ANAT-070308-215
is_a: ZFA:0009059 ! autonomic neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009277
name: acinar cell
namespace: zebrafish_anatomy
xref: CL:0000622
xref: ZFIN:ZDB-ANAT-070308-216
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009278
name: natural killer cell
namespace: zebrafish_anatomy
def: "A natural killer cell is a lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells." [ZFIN:ZDB-PUB-070221-3]
synonym: "large granular lymphocyte" RELATED []
synonym: "NK cell" RELATED []
synonym: "null cell" RELATED []
xref: CL:0000623
xref: ZFIN:ZDB-ANAT-070308-217
is_a: ZFA:0009250 ! lymphocyte
relationship: develops_from ZFA:0009348 ! natural killer cell progenitor
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009279
name: ito cell
namespace: zebrafish_anatomy
synonym: "perisinusoidal cell" RELATED []
xref: CL:0000632
xref: ZFIN:ZDB-ANAT-070308-218
is_a: ZFA:0009162 ! extracellular matrix secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009280
name: Muller cell
namespace: zebrafish_anatomy
xref: CL:0000636
xref: ZFIN:ZDB-ANAT-050915-161
is_a: ZFA:0009075 ! astrocyte
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000119 ! retinal inner nuclear layer
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009281
name: folliculostellate cell
namespace: zebrafish_anatomy
def: "A supportive cell of the vertebrate pituitary that provides macromolecular transport and secretes hormones." [CL:curator]
xref: CL:0000642
xref: ZFIN:ZDB-ANAT-070308-219
is_a: ZFA:0009096 ! endocrine cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009282
name: Bergmann glial cell
namespace: zebrafish_anatomy
xref: CL:0000644
xref: ZFIN:ZDB-ANAT-070308-220
is_a: ZFA:0009075 ! astrocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009283
name: mesangial cell
namespace: zebrafish_anatomy
xref: CL:0000650
xref: ZFIN:ZDB-ANAT-070308-221
relationship: develops_from ZFA:0009081 ! mesenchymal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009284
name: pinealocyte
namespace: zebrafish_anatomy
xref: CL:0000652
xref: ZFIN:ZDB-ANAT-070308-222
is_a: ZFA:0009096 ! endocrine cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009285
name: podocyte
namespace: zebrafish_anatomy
xref: CL:0000653
xref: ZFIN:ZDB-ANAT-070308-223
is_a: ZFA:0009034 ! epithelial cell
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0001557 ! pronephric glomerulus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009286
name: fenestrated cell
namespace: zebrafish_anatomy
synonym: "window cell" RELATED []
xref: CL:0000666
xref: ZFIN:ZDB-ANAT-070308-224
is_a: ZFA:0009034 ! epithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009287
name: collagen secreting cell
namespace: zebrafish_anatomy
xref: CL:0000667
xref: ZFIN:ZDB-ANAT-070308-225
is_a: ZFA:0009162 ! extracellular matrix secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009288
name: primordial germ cell
namespace: zebrafish_anatomy
alt_id: ZFA:0000065
xref: CL:0000670
xref: ZFIN:ZDB-ANAT-010921-483
is_a: ZFA:0009016 ! germ line cell
is_a: ZFA:0009136 ! motile cell
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000632 ! reproductive system
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0009289
name: gut absorptive cell
namespace: zebrafish_anatomy
def: "Cell of the intestinal epithelium with a brush border made up of many parallel packed microvilli; associated with absorption, particularly of macromolecules." [CL:curator]
xref: CL:0000677
xref: ZFIN:ZDB-ANAT-070308-226
is_a: ZFA:0009129 ! absorptive cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009290
name: glutamatergic neuron
namespace: zebrafish_anatomy
xref: CL:0000679
xref: ZFIN:ZDB-ANAT-070308-227
is_a: ZFA:0009059 ! autonomic neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009291
name: muscle precursor cell
namespace: zebrafish_anatomy
xref: CL:0000680
xref: ZFIN:ZDB-ANAT-050915-155
relationship: develops_from ZFA:0000041 ! mesoderm
relationship: develops_from ZFA:0009138 ! mesodermal cell
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0009292
name: radial glial cell
namespace: zebrafish_anatomy
def: "A transient cell present only in the developing CNS. Functions as both a precursor cell and as a scaffold to support neuronal migration." [CL:curator]
xref: CL:0000681
xref: ZFIN:ZDB-ANAT-050915-162
is_a: ZFA:0009168 ! neuroblast (sensu Vertebrata)
relationship: develops_from ZFA:0001120 ! neuroectoderm
relationship: develops_from ZFA:0009306 ! neuroepithelial cell
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0009293
name: M cell
namespace: zebrafish_anatomy
def: "An absorptive cell of the mammalian gut epithelium that endocytoses microorganisms and intact macromolecules from the gut lumen and transports them to the subepithelial space where they are presented to antigen-presenting cells and lymphocytes." [CL:curator]
xref: CL:0000682
xref: ZFIN:ZDB-ANAT-070308-228
is_a: ZFA:0009034 ! epithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009294
name: ependymoglial cell
namespace: zebrafish_anatomy
def: "A cell that transports hormones from neurosecretory cells." [CL:curator]
xref: CL:0000683
xref: ZFIN:ZDB-ANAT-070308-229
is_a: ZFA:0009075 ! astrocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009295
name: cerebrospinal fluid secreting cell
namespace: zebrafish_anatomy
xref: CL:0000686
xref: ZFIN:ZDB-ANAT-070308-230
is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell
relationship: develops_from ZFA:0009165 ! neural crest cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009296
name: perijunctional fibroblast
namespace: zebrafish_anatomy
def: "A fibroblast-like cell that provides support at neuromuscular junctions in vertebrates and are localized outside the synaptic basal lamina." [CL:curator]
xref: CL:0000688
xref: ZFIN:ZDB-ANAT-070308-231
is_a: ZFA:0009026 ! fibroblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009297
name: stellate interneuron
namespace: zebrafish_anatomy
xref: CL:0000691
xref: ZFIN:ZDB-ANAT-070308-232
is_a: ZFA:0009051 ! interneuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009298
name: terminal Schwann cell
namespace: zebrafish_anatomy
def: "A neuroglial cell of the peripheral nervous system inside the basal lamina of the neuromuscular junction providing chemical and physical support to the synapse." [CL:curator]
xref: CL:0000692
xref: ZFIN:ZDB-ANAT-070308-233
relationship: develops_from ZFA:0009073 ! glial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009299
name: neuroglioform cell
namespace: zebrafish_anatomy
def: "A stellate interneuron having 7-10 dendrites that may branch." [CL:curator]
synonym: "spiderweb cell" RELATED []
xref: CL:0000693
xref: ZFIN:ZDB-ANAT-070308-234
is_a: ZFA:0009297 ! stellate interneuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009300
name: Cajal-Retzius cell
namespace: zebrafish_anatomy
def: "One of a transient population of pioneering neurons in the cerebral cortex. These cells are slender bipolar cells of the developing marginal zone. One feature of these cells in mammals is that they express the Reelin gene." [CL:curator]
xref: CL:0000695
xref: ZFIN:ZDB-ANAT-070308-235
is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009301
name: dopaminergic neuron
namespace: zebrafish_anatomy
def: "A neuron that releases dopamine as a neurotransmitter." [CL:curator]
xref: CL:0000700
xref: ZFIN:ZDB-ANAT-060816-77
is_a: ZFA:0009059 ! autonomic neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009302
name: sustentacular cell
namespace: zebrafish_anatomy
def: "Cell that provides some or all mechanical, nutritional and phagocytic support to their neighbors." [CL:curator]
xref: CL:0000703
xref: ZFIN:ZDB-ANAT-070308-236
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009303
name: endothelial tip cell
namespace: zebrafish_anatomy
def: "A specialized endothelial cell that senses extracellular signals and guides the directed growth of blood vessels." [CL:curator]
xref: CL:0000704
xref: ZFIN:ZDB-ANAT-070308-237
is_a: ZFA:0009036 ! blood vessel endothelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009304
name: choroid plexus epithelial cell
namespace: zebrafish_anatomy
def: "Specialized ependymal cell that produces the cerebrospinal fluid from the blood and secretes it into the lumen of the brain and spinal chord." [CL:curator]
xref: CL:0000706
xref: ZFIN:ZDB-ANAT-070308-238
is_a: ZFA:0009033 ! ependymal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009305
name: leptomemingeal cell
namespace: zebrafish_anatomy
def: "Stromal cell that forms the internal covering of the vertebrate brain and produces ECM for this and the choroid plexus." [CL:curator]
xref: CL:0000708
xref: ZFIN:ZDB-ANAT-070308-239
is_a: ZFA:0009162 ! extracellular matrix secreting cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009306
name: neuroepithelial cell
namespace: zebrafish_anatomy
xref: CL:0000710
xref: ZFIN:ZDB-ANAT-070308-240
relationship: develops_from ZFA:0009080 ! neurectodermal cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009307
name: somatic stem cell
namespace: zebrafish_anatomy
xref: CL:0000723
xref: ZFIN:ZDB-ANAT-070308-241
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009308
name: urothelial cell
namespace: zebrafish_anatomy
def: "A cell of a layer of transitional epithelium in the wall of the bladder, ureter, and renal pelvis, external to the lamina propria." [CL:curator]
xref: CL:0000731
xref: ZFIN:ZDB-ANAT-070308-242
is_a: ZFA:0009034 ! epithelial cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009309
name: leukocyte
namespace: zebrafish_anatomy
def: "A nucleated cell of the myeloid or lymphoid lineages, found in blood or other tissue." [CL:curator]
synonym: "immune cell" RELATED []
synonym: "leucocyte" RELATED []
synonym: "white blood cell" RELATED []
xref: CL:0000738
xref: ZFIN:ZDB-ANAT-070308-243
is_a: ZFA:0009043 ! circulating cell
is_a: ZFA:0009136 ! motile cell
relationship: develops_from ZFA:0009014 ! hematopoietic stem cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009310
name: retinal ganglion cell
namespace: zebrafish_anatomy
def: "The set of neurons that receives neural inputs via bipolar, horizontal and amacrine cells. The axons of these cells make up the optic nerve." [CL:curator]
synonym: "gangliocyte" RELATED []
synonym: "RGC" RELATED []
xref: CL:0000740
xref: ZFIN:ZDB-ANAT-051116-46
is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata)
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000024 ! retinal ganglion cell layer
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009311
name: spinal accessory motor neuron
namespace: zebrafish_anatomy
def: "A motor neuron that is located in the cervical region of the spinal cord and selectively innervates the sternocleidmastoid or trapezius muscle. Unlike other motor neurons, they extend axons dorsally along lateral margins of the spinal cord." [CL:curator]
synonym: "SACMN" RELATED []
xref: CL:0000741
xref: ZFIN:ZDB-ANAT-070308-244
is_a: ZFA:0009052 ! motor neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009312
name: periarticular chondrocyte
namespace: zebrafish_anatomy
def: "A round chondrocyte that first differentiates in the late embryonic growth plate of bone." [CL:curator]
xref: CL:0000742
xref: ZFIN:ZDB-ANAT-070308-245
is_a: ZFA:0009084 ! chondrocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009313
name: hypertrophic chondrocyte
namespace: zebrafish_anatomy
def: "A terminally differentiated chondrocyte that differentiates in the late embryonic growth plate of bone." [CL:curator]
xref: CL:0000743
xref: ZFIN:ZDB-ANAT-070308-246
is_a: ZFA:0009084 ! chondrocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009314
name: columnar chondrocyte
namespace: zebrafish_anatomy
def: "A columnar chondrocyte that differentiates in the late embryonic growth plate of bone. Columnar chondrocytes vigorously proliferate and form columns in the growth plate." [CL:curator]
xref: CL:0000744
xref: ZFIN:ZDB-ANAT-070308-247
is_a: ZFA:0009084 ! chondrocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009315
name: horizontal cell
namespace: zebrafish_anatomy
def: "A neuron that laterally connects other neurons in the inner nuclear layer of the retina." [ZFIN:ZDB-PUB-070221-6]
xref: CL:0000745
xref: ZFIN:ZDB-ANAT-070308-248
is_a: ZFA:0009051 ! interneuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009316
name: cardiac muscle cell
namespace: zebrafish_anatomy
xref: CL:0000746
xref: ZFIN:ZDB-ANAT-070308-249
is_a: ZFA:0009114 ! muscle cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009317
name: cyanophore
namespace: zebrafish_anatomy
def: "A pigment cell derived from the neural crest. Contains blue pigment of unknown chemical composition in fibrous organelles termed cyanosomes. This gives a blue appearance." [CL:curator]
synonym: "blue chromatophore" RELATED []
xref: CL:0000747
xref: ZFIN:ZDB-ANAT-070308-250
is_a: ZFA:0009090 ! pigment cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009318
name: retinal bipolar neuron
namespace: zebrafish_anatomy
def: "A bipolar neuron found in the retina and having connections with photoreceptors cells and neurons in the inner plexiform layer." [CL:curator]
xref: CL:0000748
xref: ZFIN:ZDB-ANAT-070308-251
is_a: ZFA:0009055 ! bipolar neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009319
name: ON-bipolar cell
namespace: zebrafish_anatomy
def: "A bipolar neuron found in the retina and having connections with photoreceptors cells and neurons in the inner half of the inner plexiform layer. These cells depolarize in response to light stimulation of their corresponding photoreceptors." [CL:curator]
xref: CL:0000749
xref: ZFIN:ZDB-ANAT-070308-252
is_a: ZFA:0009318 ! retinal bipolar neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009320
name: OFF-bipolar cell
namespace: zebrafish_anatomy
def: "A bipolar neuron found in the retina and having connections with photoreceptors cells and neurons in the outer half of the inner plexiform layer. These cells hyperpolarize in response to light stimulation of their corresponding photoreceptors." [CL:curator]
xref: CL:0000750
xref: ZFIN:ZDB-ANAT-070308-253
is_a: ZFA:0009318 ! retinal bipolar neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009321
name: rod bipolar cell
namespace: zebrafish_anatomy
def: "A bipolar neuron found in the retina and having connections with rod photoreceptor cells and neurons in the inner plexiform layer." [CL:curator]
xref: CL:0000751
xref: ZFIN:ZDB-ANAT-070308-254
is_a: ZFA:0009318 ! retinal bipolar neuron
is_a: ZFA:0009319 ! ON-bipolar cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009322
name: cone retinal bipolar cell
namespace: zebrafish_anatomy
def: "A bipolar neuron found in the retina and having connections with cone photoreceptor cells and neurons in the inner plexiform layer." [CL:curator]
xref: CL:0000752
xref: ZFIN:ZDB-ANAT-070308-255
is_a: ZFA:0009318 ! retinal bipolar neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009323
name: thrombocyte
namespace: zebrafish_anatomy
def: "A nucleated blood cell involved in coagulation, typically seen in birds and other non-mammalian vertebrates." [CL:curator]
comment: Note that this is a non-mammalian cell type. Use platelet ; CL:0000233 for thrombocytes (platelets) in mammals.
xref: CL:0000762
xref: ZFIN:ZDB-ANAT-070308-256
is_a: ZFA:0009044 ! blood cell
is_a: ZFA:0009324 ! myeloid cell
relationship: develops_from ZFA:0009351 ! thromboblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009324
name: myeloid cell
namespace: zebrafish_anatomy
def: "A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage." [CL:curator]
xref: CL:0000763
xref: ZFIN:ZDB-ANAT-070308-257
is_a: ZFA:0009043 ! circulating cell
relationship: develops_from ZFA:0009021 ! common myeloid progenitor
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009325
name: erythroid lineage cell
namespace: zebrafish_anatomy
def: "A immature or mature cell in the lineage leading to and including erythrocytes." [CL:curator]
xref: CL:0000764
xref: ZFIN:ZDB-ANAT-070308-258
is_a: ZFA:0009324 ! myeloid cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009326
name: myeloid leukocyte
namespace: zebrafish_anatomy
def: "A cell of the monocyte, granulocyte, or mast cell lineage." [CL:curator]
xref: CL:0000766
xref: ZFIN:ZDB-ANAT-070308-259
is_a: ZFA:0009309 ! leukocyte
is_a: ZFA:0009324 ! myeloid cell
relationship: develops_from ZFA:0009021 ! common myeloid progenitor
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009327
name: neutrophil
namespace: zebrafish_anatomy
def: "Any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes." [ZFIN:ZDB-PUB-070221-1]
synonym: "neutrocyte" RELATED []
synonym: "neutrophil leucocyte" RELATED []
synonym: "neutrophil leukocyte" RELATED []
synonym: "neutrophilic leucocyte" RELATED []
synonym: "neutrophilic leukocyte" RELATED []
synonym: "PMN" RELATED []
synonym: "poly" RELATED []
synonym: "polymorphonuclear leucocyte" RELATED []
synonym: "polymorphonuclear leukocyte" RELATED []
synonym: "polymorphonuclear neutrophil" RELATED []
synonym: "polynuclear neutrophilic leucocyte" RELATED []
synonym: "polynuclear neutrophilic leukocyte" RELATED []
xref: CL:0000775
xref: ZFIN:ZDB-ANAT-070308-260
is_a: ZFA:0009048 ! granulocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009328
name: immature neutrophil
namespace: zebrafish_anatomy
def: "Any of the immature forms of a neutrophil in which neutrophilic specific granules are present but other phenotypic features of the mature form may be lacking. A neutrophil is a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes." [ZFIN:ZDB-PUB-070221-1]
synonym: "immatuer neutrophilic leukocyte" RELATED []
synonym: "immature neutrocyte" RELATED []
synonym: "immature neutrophil leucocyte" RELATED []
synonym: "immature neutrophil leukocyte" RELATED []
synonym: "immature neutrophilic leucocyte" RELATED []
xref: CL:0000776
xref: ZFIN:ZDB-ANAT-070308-261
is_a: ZFA:0009327 ! neutrophil
relationship: develops_from ZFA:0009257 ! neutrophilic promyelocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009329
name: mononuclear osteoclast
namespace: zebrafish_anatomy
def: "A specialized mononuclear phagocytic cell associated with the absorption and removal of bone." [CL:curator]
xref: CL:0000778
xref: ZFIN:ZDB-ANAT-070308-262
is_a: ZFA:0009047 ! osteoclast
is_a: ZFA:0009064 ! mononuclear phagocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009330
name: mononuclear odontoclast
namespace: zebrafish_anatomy
def: "A specialized multinuclear phagocytic cell associated with the absorption and removal of cementum." [CL:curator]
xref: CL:0000781
xref: ZFIN:ZDB-ANAT-070308-263
is_a: ZFA:0009270 ! odontoclast
is_a: ZFA:0009329 ! mononuclear osteoclast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009331
name: mature B cell
namespace: zebrafish_anatomy
def: "A mature form of a B cell, a type of lymphocyte whose defining characteristic is the expression of an immunoglobulin complex." [ZFIN:ZDB-PUB-070221-3]
synonym: "mature B lymphocyte" RELATED []
synonym: "mature B-cell" RELATED []
synonym: "mature B-lymphocyte" RELATED []
xref: CL:0000785
xref: ZFIN:ZDB-ANAT-070308-264
is_a: ZFA:0009088 ! professional antigen presenting cell
is_a: ZFA:0009142 ! B cell
relationship: develops_from ZFA:0009343 ! immature B cell
relationship: develops_from ZFA:0009345 ! transitional stage B cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009332
name: plasma cell
namespace: zebrafish_anatomy
def: "A terminally differentiated, post-mitotic, short-lived cell of the B cell lineage devoted to producing large amounts of immunoglobulin. Plasma cells are oval or round with extensive rough endoplasmic reticulum, a well-developed Golgi apparatus, and a round nucleus having a characteristic cartwheel heterochromatin pattern." [ZFIN:ZDB-PUB-070221-1, ZFIN:ZDB-PUB-070221-3]
synonym: "plasmacyte" RELATED []
xref: CL:0000786
xref: ZFIN:ZDB-ANAT-070308-265
is_a: ZFA:0009250 ! lymphocyte
relationship: develops_from ZFA:0009331 ! mature B cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009333
name: memory B cell
namespace: zebrafish_anatomy
def: "A distinctly differentiated long-lived B cell that is readily activated upon reencounter of its antigenic determinant. Memory B cells differentiate from antigen-activated B cells which have been selected for expression of higher affinity immunoglobulin." [ZFIN:ZDB-PUB-070221-3]
synonym: "memory B lymphocyte" RELATED []
synonym: "memory B-cell" RELATED []
synonym: "memory B-lymphocyte" RELATED []
xref: CL:0000787
xref: ZFIN:ZDB-ANAT-070308-266
is_a: ZFA:0009142 ! B cell
relationship: develops_from ZFA:0009331 ! mature B cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009334
name: naive B cell
namespace: zebrafish_anatomy
def: "A mature B cell which has not yet been activated by antigen." [CL:curator]
synonym: "naive B lymphocyte" RELATED []
synonym: "nave B-cell" RELATED []
synonym: "nave B-lymphocyte" RELATED []
xref: CL:0000788
xref: ZFIN:ZDB-ANAT-070308-267
is_a: ZFA:0009331 ! mature B cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009335
name: alpha-beta T cell
namespace: zebrafish_anatomy
def: "An immature or mature T cell expressing an alpha-beta T cell receptor complex." [ZFIN:ZDB-PUB-070221-3]
synonym: "alpha-beta T lymphocyte" RELATED []
synonym: "alpha-beta T-cell" RELATED []
synonym: "alpha-beta T-lymphocyte" RELATED []
xref: CL:0000789
xref: ZFIN:ZDB-ANAT-070308-268
is_a: ZFA:0009046 ! T cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009336
name: gamma-delta T cell
namespace: zebrafish_anatomy
def: "An immature or mature T cell expressing an gamma-delta T cell receptor complex." [ZFIN:ZDB-PUB-070221-3]
comment: Note that gamma-delta T cell have both thymic and extrathymic differentiation pathways.
synonym: "gamma-delta T lymphocyte" RELATED []
synonym: "gamma-delta T-cell" RELATED []
synonym: "gamma-delta T-lymphocyte" RELATED []
xref: CL:0000798
xref: ZFIN:ZDB-ANAT-070308-269
is_a: ZFA:0009046 ! T cell
relationship: develops_from ZFA:0009350 ! pro-T cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009337
name: immature gamma-delta T cell
namespace: zebrafish_anatomy
def: "An immature T cell expressing an gamma-delta T cell receptor complex." [ZFIN:ZDB-PUB-070221-3]
comment: Note that gamma-delta T cell have both thymic and extrathymic differentiation pathways.
synonym: "immature gamma-delta T lymphocyte" RELATED []
synonym: "immature gamma-delta T-cell" RELATED []
synonym: "immature gamma-delta T-lymphocyte" RELATED []
xref: CL:0000799
xref: ZFIN:ZDB-ANAT-070308-270
is_a: ZFA:0009336 ! gamma-delta T cell
is_a: ZFA:0009340 ! immature T cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009338
name: mature gamma-delta T cell
namespace: zebrafish_anatomy
def: "A mature T cell expressing an gamma-delta T cell receptor complex." [ZFIN:ZDB-PUB-070221-3]
synonym: "mature gamma-delta T lymphocyte" RELATED []
synonym: "mature gamma-delta T-cell" RELATED []
synonym: "mature gamma-delta T-lymphocyte" RELATED []
xref: CL:0000800
xref: ZFIN:ZDB-ANAT-070308-271
is_a: ZFA:0009336 ! gamma-delta T cell
is_a: ZFA:0009341 ! mature T cell
relationship: develops_from ZFA:0009337 ! immature gamma-delta T cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009339
name: gamma-delta intraepithelial T cell
namespace: zebrafish_anatomy
def: "A gamma-delta T cell of the columnar epithelium of the gastrointestinal tract. Intraepithelial T cells often have distinct developmental pathways and activation requirements." [ZFIN:ZDB-PUB-070221-3]
synonym: "gamma-delta intraepithelial T lymphocyte" RELATED []
synonym: "gamma-delta intraepithelial T-cell" RELATED []
synonym: "gamma-delta intraepithelial T-lymphocyte" RELATED []
synonym: "IEL" RELATED []
synonym: "intraepithelial lymphocyte" RELATED []
xref: CL:0000801
xref: ZFIN:ZDB-ANAT-070308-272
is_a: ZFA:0009338 ! mature gamma-delta T cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009340
name: immature T cell
namespace: zebrafish_anatomy
def: "An immature form of a T cell, a type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex." [ZFIN:ZDB-PUB-070221-3]
synonym: "immature T lymphocyte" RELATED []
synonym: "immature T-cell" RELATED []
synonym: "immature T-lymphocyte" RELATED []
xref: CL:0000804
xref: ZFIN:ZDB-ANAT-070308-273
is_a: ZFA:0009046 ! T cell
relationship: develops_from ZFA:0009350 ! pro-T cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009341
name: mature T cell
namespace: zebrafish_anatomy
def: "A mature form of a T cell, a type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex." [ZFIN:ZDB-PUB-070221-3]
synonym: "mature T lymphocyte" RELATED []
synonym: "mature T-cell" RELATED []
synonym: "mature T-lymphocyte" RELATED []
xref: CL:0000812
xref: ZFIN:ZDB-ANAT-070308-274
is_a: ZFA:0009046 ! T cell
relationship: develops_from ZFA:0009340 ! immature T cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009342
name: memory T cell
namespace: zebrafish_anatomy
def: "A distinctly differentiated long-lived T cell that is readily activated upon reencounter of its antigenic determinant." [ZFIN:ZDB-PUB-070221-3]
synonym: "memory T lymphocyte" RELATED []
synonym: "memory T-cell" RELATED []
synonym: "memory T-lymphocyte" RELATED []
xref: CL:0000813
xref: ZFIN:ZDB-ANAT-070308-275
is_a: ZFA:0009046 ! T cell
relationship: develops_from ZFA:0009341 ! mature T cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009343
name: immature B cell
namespace: zebrafish_anatomy
def: "A immature form of a B cell, a type of lymphocyte whose defining characteristic is the expression of an immunoglobulin complex." [ZFIN:ZDB-PUB-070221-3]
synonym: "immature B lymphocyte" RELATED []
synonym: "immature B-cell" RELATED []
synonym: "immature B-lymphocyte" RELATED []
xref: CL:0000816
xref: ZFIN:ZDB-ANAT-070308-276
is_a: ZFA:0009142 ! B cell
relationship: develops_from ZFA:0009349 ! pro-B cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009344
name: pre-B cell
namespace: zebrafish_anatomy
def: "A fully committed immature B cell that expresses the pre-B cell receptor." [ZFIN:ZDB-PUB-070221-3]
synonym: "pre-B lymphocyte" RELATED []
xref: CL:0000817
xref: ZFIN:ZDB-ANAT-070308-277
is_a: ZFA:0009343 ! immature B cell
relationship: develops_from ZFA:0009349 ! pro-B cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009345
name: transitional stage B cell
namespace: zebrafish_anatomy
def: "An immature B cell of an intermediate stage between the pre-B cell stage and the mature nave stage. Transitional B cells express surface immunoglobulin, and are subject to the process of B cell selection." [ZFIN:ZDB-PUB-070221-3]
synonym: "T1 B cell" RELATED []
synonym: "T2 B cell" RELATED []
synonym: "T3 B cell" RELATED []
synonym: "transitional stage B lymphocyte" RELATED []
synonym: "transitional stage B-cell" RELATED []
synonym: "transitional stage B-lymphocyte" RELATED []
xref: CL:0000818
xref: ZFIN:ZDB-ANAT-070308-278
is_a: ZFA:0009343 ! immature B cell
relationship: develops_from ZFA:0009344 ! pre-B cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009346
name: immature natural killer cell
namespace: zebrafish_anatomy
def: "An immature form of a natural killer cell, a lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells. Immature natural killer cells have begun to express the characteristic natural killer cell activation and inhibitory molecules through a selection process leading to tolerance to normal self cells." [ZFIN:ZDB-PUB-070221-3]
synonym: "p-NK" RELATED []
xref: CL:0000823
xref: ZFIN:ZDB-ANAT-070308-279
is_a: ZFA:0009278 ! natural killer cell
relationship: develops_from ZFA:0009348 ! natural killer cell progenitor
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009347
name: mature natural killer cell
namespace: zebrafish_anatomy
def: "A mature form of a natural killer cell, a lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells." [ZFIN:ZDB-PUB-070221-3]
synonym: "LAK cell" RELATED []
synonym: "lymphokine activated killer cell" RELATED []
xref: CL:0000824
xref: ZFIN:ZDB-ANAT-070308-280
is_a: ZFA:0009278 ! natural killer cell
relationship: develops_from ZFA:0009346 ! immature natural killer cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009348
name: natural killer cell progenitor
namespace: zebrafish_anatomy
def: "A progenitor committed to the natural killer cell lineage, expressing certain phenotypic markers of the natural killer cell lineage such as the IL-15 receptor, but lacking many of the phenotypic characteristics of later stages of natural killer cell development such as expression of NK activating and inhibitory molecules." [CL:curator]
synonym: "NKP" RELATED []
synonym: "null cell" RELATED []
synonym: "preNK cell" RELATED []
xref: CL:0000825
xref: ZFIN:ZDB-ANAT-070308-281
is_a: ZFA:0009355 ! lymphoid progenitor cell
relationship: develops_from ZFA:0009023 ! common lymphocyte progenitor
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009349
name: pro-B cell
namespace: zebrafish_anatomy
def: "A progenitor cell of the B cell lineage, with some lineage specific activity such as early stages of recombination of B cell receptor genes, but not yet fully committed to the B cell lineage until the expression of PAX5 occurs." [ZFIN:ZDB-PUB-070221-3]
synonym: "pro-B lymphocyte" RELATED []
xref: CL:0000826
xref: ZFIN:ZDB-ANAT-070308-282
is_a: ZFA:0009355 ! lymphoid progenitor cell
relationship: develops_from ZFA:0009023 ! common lymphocyte progenitor
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009350
name: pro-T cell
namespace: zebrafish_anatomy
def: "A progenitor cell of the T cell lineage, with some lineage specific marker expression, but not yet fully committed to the T cell lineage." [ZFIN:ZDB-PUB-070221-3]
synonym: "DN1 cell" RELATED []
synonym: "DN1 thymocyte" RELATED []
synonym: "pro-T lymphocyte" RELATED []
synonym: "T lymphoblast" RELATED []
synonym: "TN1 cell" RELATED []
xref: CL:0000827
xref: ZFIN:ZDB-ANAT-050915-144
is_a: ZFA:0009355 ! lymphoid progenitor cell
relationship: develops_from ZFA:0009023 ! common lymphocyte progenitor
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001078 ! thymus
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0009351
name: thromboblast
namespace: zebrafish_anatomy
def: "A progenitor cell of the thrombocyte, a nucleated blood cell involved in coagulation typically seen in birds and other non-mammalian vertebrates." [CL:curator]
comment: Note that this is a non-mammalian cell type.
xref: CL:0000828
xref: ZFIN:ZDB-ANAT-070308-283
is_a: ZFA:0009356 ! myeloid progenitor cell
relationship: develops_from ZFA:0009022 ! megakaryocyte erythroid progenitor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009352
name: neutrophil progenitor cell
namespace: zebrafish_anatomy
def: "A progenitor cell of the neutrophil lineage." [ZFIN:ZDB-PUB-070221-1]
synonym: "neutrophil stem cell" RELATED []
xref: CL:0000834
xref: ZFIN:ZDB-ANAT-070308-284
is_a: ZFA:0009356 ! myeloid progenitor cell
relationship: develops_from ZFA:0009251 ! granulocyte monocyte progenitor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009353
name: myeloblast
namespace: zebrafish_anatomy
def: "The most primitive precursor in the granulocytic series, having fine, evenly distributed chromatin, several nucleoli, and a nongranular basophilic cytoplasm." [ZFIN:ZDB-PUB-070221-1]
xref: CL:0000835
xref: ZFIN:ZDB-ANAT-070308-285
is_a: ZFA:0009356 ! myeloid progenitor cell
relationship: develops_from ZFA:0009251 ! granulocyte monocyte progenitor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009354
name: hematopoietic progenitor cell
namespace: zebrafish_anatomy
def: "A progenitor cell of any hematopoietic lineage, potentially multipotent." [CL:curator]
comment: Note that this is a class of cell types, not an identified single cell type.
synonym: "hemopoietic progenitor cell" RELATED []
xref: CL:0000837
xref: ZFIN:ZDB-ANAT-070308-286
relationship: develops_from ZFA:0009014 ! hematopoietic stem cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009355
name: lymphoid progenitor cell
namespace: zebrafish_anatomy
def: "A progenitor cell of any lymphoid lineage, potentially multipotent." [CL:curator]
comment: Note that this is a class of cell types, not an identified single cell type.
xref: CL:0000838
xref: ZFIN:ZDB-ANAT-070308-287
is_a: ZFA:0009354 ! hematopoietic progenitor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009356
name: myeloid progenitor cell
namespace: zebrafish_anatomy
def: "A progenitor cell of any myeloid lineage, potentially multipotent." [CL:curator]
comment: Note that this is a class of cell types, not an identified single cell type.
xref: CL:0000839
xref: ZFIN:ZDB-ANAT-070308-288
is_a: ZFA:0009354 ! hematopoietic progenitor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009357
name: mononuclear cell
namespace: zebrafish_anatomy
def: "A leukocyte with a single non-segmented nucleus in the mature form." [CL:curator]
xref: CL:0000842
xref: ZFIN:ZDB-ANAT-070308-289
is_a: ZFA:0009309 ! leukocyte
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009358
name: ciliated olfactory receptor neuron
namespace: zebrafish_anatomy
def: "An olfactory receptor cell in which the apical ending of the dendrite is a pronounced ciliated olfactory knob." [ZFIN:ZDB-PUB-060724-7]
synonym: "ciliated olfactory sensory neuron" RELATED []
synonym: "ciliated sensory neuron" RELATED []
xref: CL:0000847
xref: ZFIN:ZDB-ANAT-070308-290
is_a: ZFA:0009125 ! olfactory receptor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009359
name: microvillous olfactory receptor neuron
namespace: zebrafish_anatomy
def: "An olfactory receptor cell in which the apical ending of the dendrite is a knob that bears numerous microvilli." [ZFIN:ZDB-PUB-060724-7]
synonym: "microvillous olfactory sensory neuron" RELATED []
synonym: "microvillous sensory neuron" RELATED []
xref: CL:0000848
xref: ZFIN:ZDB-ANAT-070308-291
is_a: ZFA:0009125 ! olfactory receptor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009360
name: crypt olfactory receptor neuron
namespace: zebrafish_anatomy
def: "An olfactory receptor cell with short cilia growing in an invagination bordered by microvilli." [ZFIN:ZDB-PUB-060724-7]
synonym: "crypt cell" RELATED []
synonym: "crypt olfactory sensory neuron" RELATED []
synonym: "crypt sensory neuron" RELATED []
xref: CL:0000849
xref: ZFIN:ZDB-ANAT-070308-292
is_a: ZFA:0009125 ! olfactory receptor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009361
name: serotonergic neuron
namespace: zebrafish_anatomy
def: "A neuron that releases serotonin as a neurotransmitter." [CL:curator]
synonym: "5-HT neuron" RELATED []
synonym: "5-hydroxytryptamine neuron" RELATED []
xref: CL:0000850
xref: ZFIN:ZDB-ANAT-070308-293
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009362
name: neuromast mantle cell
namespace: zebrafish_anatomy
def: "Neuromast mantle cell is a non-sensory cell. Neuromast mantle cells surround the neuromast support cells and neuromast hair cells, separating the neuromast from the epidermis, and secrete cupula in which the ciliary bundles of all the hair cells are embedded." [ZFIN:ZDB-PUB-070221-7]
xref: CL:0000851
xref: ZFIN:ZDB-ANAT-070308-294
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009363
name: neuromast support cell
namespace: zebrafish_anatomy
def: "Neuromast support cell is a non-sensory cell of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; neuromast support cells are surrounded by neuromast mantle cells." [ZFIN:ZDB-PUB-070221-7]
xref: CL:0000852
xref: ZFIN:ZDB-ANAT-070308-295
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009364
name: olfactory epithelial support cell
namespace: zebrafish_anatomy
def: "Olfactory epithelial support cell is a non ciliated columnar cell that extends from the epithelial free margin to the basement membrane of the olfactory epithelium." [CL:curator]
synonym: "olfactory sustentacular cell" RELATED []
xref: CL:0000853
xref: ZFIN:ZDB-ANAT-070308-296
is_a: ZFA:0009000 ! cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009365
name: interneuromast cell
namespace: zebrafish_anatomy
def: "Interneuromast cell is a neuroectodermal cell deposited by the migrating lateral line primordium between the neuromasts. Interneuromast cells proliferate and migrate to form additional neuromasts." [CL:curator]
xref: CL:0000854
xref: ZFIN:ZDB-ANAT-050711-65
is_a: ZFA:0009080 ! neurectodermal cell
relationship: develops_from ZFA:0009012 ! neuroplacodal cell
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000034 ! lateral line system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0009366
name: hair cell
namespace: zebrafish_anatomy
def: "Hair cell is a mechanoreceptor cell that is sensitive to movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system." [CL:curator]
xref: CL:0000855
xref: ZFIN:ZDB-ANAT-070308-297
is_a: ZFA:0009120 ! mechanoreceptor cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009367
name: neuromast hair cell
namespace: zebrafish_anatomy
def: "Neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface." [CL:curator]
xref: CL:0000856
xref: ZFIN:ZDB-ANAT-070308-298
is_a: ZFA:0009366 ! hair cell
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000243 ! neuromast
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009368
name: slow muscle myoblast
namespace: zebrafish_anatomy
def: "A skeletal muscle myoblast that differentiates into slow muscle fibers." [CL:curator]
xref: CL:0000857
xref: ZFIN:ZDB-ANAT-070308-299
is_a: ZFA:0009236 ! skeletal muscle myoblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009369
name: fast muscle myoblast
namespace: zebrafish_anatomy
def: "A skeletal muscle myoblast that differentiates into fast muscle fibers." [CL:curator]
xref: CL:0000858
xref: ZFIN:ZDB-ANAT-070308-300
is_a: ZFA:0009236 ! skeletal muscle myoblast
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009370
name: stretch receptor cell
namespace: zebrafish_anatomy
xref: CL:1000082
xref: ZFIN:ZDB-ANAT-070308-301
is_a: ZFA:0009001 ! receptor cell (sensu Animalia)
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0009371
name: stratified keratinized epithelial stem cell
namespace: zebrafish_anatomy
xref: CL:1000083
xref: ZFIN:ZDB-ANAT-070308-302
is_a: ZFA:0009180 ! stratified epithelial stem cell
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0100000
name: zebrafish anatomical entity
namespace: zebrafish_anatomy
[Term]
id: ZFS:0000000
name: Unknown
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-050211-1
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000001
name: Zygote:1-cell
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-4
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000002
name: Cleavage:2-cell
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-15
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000003
name: Cleavage:4-cell
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-11
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000004
name: Cleavage:8-cell
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-33
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000005
name: Cleavage:16-cell
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-20
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000006
name: Cleavage:32-cell
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-25
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000007
name: Cleavage:64-cell
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-28
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000008
name: Blastula:128-cell
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-7
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000009
name: Blastula:256-cell
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-1
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000010
name: Blastula:512-cell
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-14
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000011
name: Blastula:1k-cell
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-22
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000012
name: Blastula:High
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-27
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000013
name: Blastula:Oblong
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-24
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000014
name: Blastula:Sphere
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-21
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000015
name: Blastula:Dome
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-19
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000016
name: Blastula:30%-epiboly
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-17
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000017
name: Gastrula:50%-epiboly
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-6
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000018
name: Gastrula:Germ-ring
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-3
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000019
name: Gastrula:Shield
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-2
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000020
name: Gastrula:75%-epiboly
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-18
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000021
name: Gastrula:90%-epiboly
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-29
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000022
name: Gastrula:Bud
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-12
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000023
name: Segmentation:1-4 somites
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-23
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000024
name: Segmentation:5-9 somites
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-5
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000025
name: Segmentation:10-13 somites
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-020626-1
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000026
name: Segmentation:14-19 somites
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-30
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000027
name: Segmentation:20-25 somites
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-16
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000028
name: Segmentation:26+ somites
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-34
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000029
name: Pharyngula:Prim-5
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-10
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000030
name: Pharyngula:Prim-15
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-32
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000031
name: Pharyngula:Prim-25
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-13
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000032
name: Pharyngula:High-pec
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-31
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000033
name: Hatching:Long-pec
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-9
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000034
name: Hatching:Pec-fin
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-26
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000035
name: Larval:Protruding-mouth
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-8
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000036
name: Larval:Day 4
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-35
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000037
name: Larval:Day 5
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-36
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000038
name: Larval:Day 6
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-37
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000039
name: Larval:Days 7-13
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-47
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000040
name: Larval:Days 14-20
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-48
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000041
name: Larval:Days 21-29
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-49
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000042
name: Juvenile:Days 30-44
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-51
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000043
name: Juvenile:Days 45-89
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-52
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0000044
name: Adult
namespace: zebrafish_stages
xref: ZFIN:ZDB-STAGE-010723-39
is_a: ZFS:0100000 ! Stages
[Term]
id: ZFS:0100000
name: Stages
namespace: zebrafish_stages
[Typedef]
id: develops_from
name: develops from
is_transitive: true
[Typedef]
id: end
name: end stage
[Typedef]
id: part_of
name: part of
is_transitive: true
[Typedef]
id: start
name: start stage